BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040915
(104 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FYB5|DNJ11_ARATH Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana
GN=ATJ11 PE=1 SV=2
Length = 161
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Query: 7 GSLYEVLRVEPTTMISEIKMAYQSLAKVYHLDLSGNGR-------DFIEIHKTYEMLSDP 59
SLY+VL V +IK AY+ LA++ H D++G R +F++IH Y LSDP
Sbjct: 64 ASLYDVLEVPLGATSQDIKSAYRRLARICHPDVAGTDRTSSSSADEFMKIHAAYCTLSDP 123
Query: 60 TARVVYDMSLVSRRRTRTTSFGCLCWSGFHPTRRWE 95
R VYD ++ R R T L G + R WE
Sbjct: 124 EKRSVYDRRMLRRSRPLTVGTSGL---GSYVGRNWE 156
>sp|Q9SDN0|DNJ20_ARATH Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana
GN=ATJ20 PE=2 SV=2
Length = 197
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 16/103 (15%)
Query: 8 SLYEVLRVEPTTMISEIKMAYQSLAKVYHLDLSGNGR------DFIEIHKTYEMLSDPTA 61
S Y++L V + + EIK AY+ LA+ YH D+S R FI + + YE LSDP
Sbjct: 66 SFYDLLGVTESVTLPEIKQAYKQLARKYHPDVSPPDRVEEYTDRFIRVQEAYETLSDPRR 125
Query: 62 RVVYDMSLVSRRRTRTTSFG-CLCWSGFHPTRRWEIIVEENGD 103
RV+YD L S G +SG R + +VEE +
Sbjct: 126 RVLYDRDL---------SMGFSFSFSGRRQNRYDQEVVEEKSE 159
>sp|P47248|DNAJL_MYCGE DnaJ-like protein MG002 OS=Mycoplasma genitalium (strain ATCC
33530 / G-37 / NCTC 10195) GN=MG002 PE=4 SV=1
Length = 310
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 8 SLYEVLRVEPTTMISEIKMAYQSLAKVYHLDLSGNG-RDFIEIHKTYEMLSDPTARVVYD 66
+LY++L + T I EIK+AY+ LAK YH D++ G + F+EI+ Y +LSDP + YD
Sbjct: 2 NLYDLLELPTTASIKEIKIAYKRLAKRYHPDVNKLGSQTFVEINNAYSILSDPNQKEKYD 61
Query: 67 MSL 69
L
Sbjct: 62 SML 64
>sp|Q8RB67|DNAJ_THETN Chaperone protein DnaJ OS=Thermoanaerobacter tengcongensis
(strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
GN=dnaJ PE=3 SV=1
Length = 384
Score = 54.7 bits (130), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 6 RGSLYEVLRVEPTTMISEIKMAYQSLAKVYHLDLSGNGRD----FIEIHKTYEMLSDPTA 61
+ LYE+L V+ EIK AY+ LAK YH DL+ ++ F EI++ YE+LSDP
Sbjct: 3 KKDLYEILGVDRNASQEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQK 62
Query: 62 RVVYD 66
R YD
Sbjct: 63 RAQYD 67
>sp|Q50312|DNAJL_MYCPN DnaJ-like protein MG002 homolog OS=Mycoplasma pneumoniae (strain
ATCC 29342 / M129) GN=MPN_002 PE=4 SV=1
Length = 309
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 8 SLYEVLRVEPTTMISEIKMAYQSLAKVYHLDLSGNGRD-FIEIHKTYEMLSDPTARVVYD 66
+LY++L + T + EIK AY+ LAK YH D++ G D F++I+ Y +LSD T + YD
Sbjct: 2 TLYDLLELPQTATLQEIKTAYKRLAKRYHPDINKQGADTFVKINNAYAVLSDTTQKAEYD 61
Query: 67 MSL 69
L
Sbjct: 62 AML 64
>sp|Q09912|PSI1_SCHPO Protein psi1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=psi1 PE=2 SV=2
Length = 379
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 9 LYEVLRVEPTTMISEIKMAYQSLAKVYHLDLSGNG-RDFIEIHKTYEMLSDPTARVVYD 66
LY+ L V P +E+K AY+ LA YH D + NG + F EI YE+LSDP R +YD
Sbjct: 7 LYDCLEVRPEASEAELKKAYRKLALKYHPDKNPNGEKKFKEISLAYEVLSDPQRRKLYD 65
>sp|Q71ZJ8|DNAJ_LISMF Chaperone protein DnaJ OS=Listeria monocytogenes serotype 4b
(strain F2365) GN=dnaJ PE=3 SV=1
Length = 376
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 10 YEVLRVEPTTMISEIKMAYQSLAKVYHLDL---SGNGRDFIEIHKTYEMLSDPTARVVYD 66
YEVL V + EIK AY+ L+K YH D+ +G F EI + YE LSDP R YD
Sbjct: 7 YEVLGVSKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
>sp|C1KVB9|DNAJ_LISMC Chaperone protein DnaJ OS=Listeria monocytogenes serotype 4b
(strain CLIP80459) GN=dnaJ PE=3 SV=1
Length = 376
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 10 YEVLRVEPTTMISEIKMAYQSLAKVYHLDL---SGNGRDFIEIHKTYEMLSDPTARVVYD 66
YEVL V + EIK AY+ L+K YH D+ +G F EI + YE LSDP R YD
Sbjct: 7 YEVLGVSKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
>sp|Q8DKR7|DNAJ_THEEB Chaperone protein DnaJ OS=Thermosynechococcus elongatus (strain
BP-1) GN=dnaJ PE=3 SV=2
Length = 373
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 9 LYEVLRVEPTTMISEIKMAYQSLAKVYHLDLS---GNGRDFIEIHKTYEMLSDPTARVVY 65
YE+L V + E+K AY+ LA+ YH D++ G F EI++ YE+LSDP AR Y
Sbjct: 5 FYEILGVSRSADAEELKRAYRRLARKYHPDVNKEPGAEEKFKEINRAYEVLSDPQARANY 64
Query: 66 D 66
D
Sbjct: 65 D 65
>sp|O74752|MAS5_SCHPO Mitochondrial protein import protein mas5 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mas5 PE=3 SV=1
Length = 407
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 9 LYEVLRVEPTTMISEIKMAYQSLAKVYHLDLSGNGRD-FIEIHKTYEMLSDPTARVVYD 66
LYEVL V+ T +E+K AY+ LA YH D + N D F EI + YE+L+D R YD
Sbjct: 7 LYEVLNVDVTASQAELKKAYRKLALKYHPDKNPNAGDKFKEISRAYEILADEEKRATYD 65
>sp|O35824|DNJA2_RAT DnaJ homolog subfamily A member 2 OS=Rattus norvegicus GN=Dnaja2
PE=2 SV=1
Length = 412
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 9 LYEVLRVEPTTMISEIKMAYQSLAKVYHLDLSGNGRD-FIEIHKTYEMLSDPTARVVYD 66
LY++L V P +E+K AY+ LAK YH D + N D F EI YE+LS+P R +YD
Sbjct: 9 LYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYD 67
>sp|Q9QYJ0|DNJA2_MOUSE DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1
SV=1
Length = 412
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 9 LYEVLRVEPTTMISEIKMAYQSLAKVYHLDLSGNGRD-FIEIHKTYEMLSDPTARVVYD 66
LY++L V P +E+K AY+ LAK YH D + N D F EI YE+LS+P R +YD
Sbjct: 9 LYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYD 67
>sp|O60884|DNJA2_HUMAN DnaJ homolog subfamily A member 2 OS=Homo sapiens GN=DNAJA2 PE=1
SV=1
Length = 412
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 9 LYEVLRVEPTTMISEIKMAYQSLAKVYHLDLSGNGRD-FIEIHKTYEMLSDPTARVVYD 66
LY++L V P +E+K AY+ LAK YH D + N D F EI YE+LS+P R +YD
Sbjct: 9 LYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYD 67
>sp|Q2HJ94|DNJA2_BOVIN DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2
SV=1
Length = 412
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 9 LYEVLRVEPTTMISEIKMAYQSLAKVYHLDLSGNGRD-FIEIHKTYEMLSDPTARVVYD 66
LY++L V P +E+K AY+ LAK YH D + N D F EI YE+LS+P R +YD
Sbjct: 9 LYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYD 67
>sp|P0DJM1|DNAJ_LISMO Chaperone protein DnaJ OS=Listeria monocytogenes serovar 1/2a
(strain ATCC BAA-679 / EGD-e) GN=dnaJ PE=3 SV=1
Length = 377
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 10 YEVLRVEPTTMISEIKMAYQSLAKVYHLDL---SGNGRDFIEIHKTYEMLSDPTARVVYD 66
YEVL + + EIK AY+ L+K YH D+ +G F EI + YE LSDP R YD
Sbjct: 7 YEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
>sp|B8DE39|DNAJ_LISMH Chaperone protein DnaJ OS=Listeria monocytogenes serotype 4a
(strain HCC23) GN=dnaJ PE=3 SV=1
Length = 376
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 10 YEVLRVEPTTMISEIKMAYQSLAKVYHLDL---SGNGRDFIEIHKTYEMLSDPTARVVYD 66
YEVL + + EIK AY+ L+K YH D+ +G F EI + YE LSDP R YD
Sbjct: 7 YEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
>sp|G2K045|DNAJ_LISM4 Chaperone protein DnaJ OS=Listeria monocytogenes serotype 1/2a
(strain 10403S) GN=dnaJ PE=3 SV=1
Length = 377
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 10 YEVLRVEPTTMISEIKMAYQSLAKVYHLDL---SGNGRDFIEIHKTYEMLSDPTARVVYD 66
YEVL + + EIK AY+ L+K YH D+ +G F EI + YE LSDP R YD
Sbjct: 7 YEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
>sp|Q92BN9|DNAJ_LISIN Chaperone protein DnaJ OS=Listeria innocua serovar 6a (strain
CLIP 11262) GN=dnaJ PE=3 SV=1
Length = 376
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 10 YEVLRVEPTTMISEIKMAYQSLAKVYHLDL---SGNGRDFIEIHKTYEMLSDPTARVVYD 66
YEVL + + EIK AY+ L+K YH D+ +G F EI + YE LSDP R YD
Sbjct: 7 YEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
>sp|O66921|DNAJ2_AQUAE Chaperone protein DnaJ 2 OS=Aquifex aeolicus (strain VF5)
GN=dnaJ2 PE=3 SV=1
Length = 376
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 1 MALGTRGSLYEVLRVEPTTMISEIKMAYQSLAKVYHLDLSGN---GRDFIEIHKTYEMLS 57
MA T+ YE+L V EIK AY+ L + YH D+ F EI++ Y++LS
Sbjct: 1 MASSTKKDYYEILGVPRNASQEEIKKAYRRLVRKYHPDICKKPECEEKFKEINEAYQVLS 60
Query: 58 DPTARVVYDM 67
DP R +YDM
Sbjct: 61 DPEKRKLYDM 70
>sp|Q0K758|DNAJ_CUPNH Chaperone protein DnaJ OS=Cupriavidus necator (strain ATCC 17699
/ H16 / DSM 428 / Stanier 337) GN=dnaJ PE=3 SV=1
Length = 381
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 10 YEVLRVEPTTMISEIKMAYQSLAKVYHLDLSGNGRD-------FIEIHKTYEMLSDPTAR 62
YEVL V EIK AY+ LA YH D + G+D F E+ + YEMLSDP +
Sbjct: 7 YEVLGVGKNASDDEIKKAYRKLAMKYHPDRNPEGKDGKIAEEKFKEVKEAYEMLSDPEKK 66
Query: 63 VVYD 66
YD
Sbjct: 67 AAYD 70
>sp|A3DF24|DNAJ_CLOTH Chaperone protein DnaJ OS=Clostridium thermocellum (strain ATCC
27405 / DSM 1237) GN=dnaJ PE=3 SV=1
Length = 386
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 10 YEVLRVEPTTMISEIKMAYQSLAKVYHLDLSGNGR----DFIEIHKTYEMLSDPTARVVY 65
YE+L V+ +EIK AY+ LAK YH D++ + F EI++ YE+LSDP R Y
Sbjct: 8 YEILGVDRGASDAEIKKAYRKLAKQYHPDMNPGDKAAEAKFKEINEAYEVLSDPQKRARY 67
Query: 66 D 66
D
Sbjct: 68 D 68
>sp|Q8WW22|DNJA4_HUMAN DnaJ homolog subfamily A member 4 OS=Homo sapiens GN=DNAJA4 PE=1
SV=1
Length = 397
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 10 YEVLRVEPTTMISEIKMAYQSLAKVYHLDLSGN-GRDFIEIHKTYEMLSDPTARVVYD 66
Y++L V+P+ EIK AY+ LA YH D + + G F I + YE+LSDP R VYD
Sbjct: 8 YDILGVKPSASPEEIKKAYRKLALKYHPDKNPDEGEKFKLISQAYEVLSDPKKRDVYD 65
>sp|B8CXL0|DNAJ_HALOH Chaperone protein DnaJ OS=Halothermothrix orenii (strain H 168 /
OCM 544 / DSM 9562) GN=dnaJ PE=3 SV=1
Length = 375
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 3 LGTRGSLYEVLRVEPTTMISEIKMAYQSLAKVYHLDLSGNGRD----FIEIHKTYEMLSD 58
+ T YE+L V EIK AY+ LA+ YH D++ + D F EI + YE+LSD
Sbjct: 1 MATSKDYYEILGVSRDADQKEIKKAYRRLARKYHPDINKDDPDAEEKFKEISEAYEILSD 60
Query: 59 PTARVVYD 66
P R YD
Sbjct: 61 PDKRARYD 68
>sp|Q5HNW7|DNAJ_STAEQ Chaperone protein DnaJ OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=dnaJ PE=3 SV=1
Length = 373
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 10 YEVLRVEPTTMISEIKMAYQSLAKVYHLDLS---GNGRDFIEIHKTYEMLSDPTARVVYD 66
YEVL V + EIK AY+ L+K YH D++ G F EI + YE+LSD RV YD
Sbjct: 7 YEVLGVNKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDENKRVNYD 66
>sp|B4F2V6|DNAJ_PROMH Chaperone protein DnaJ OS=Proteus mirabilis (strain HI4320)
GN=dnaJ PE=3 SV=1
Length = 378
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 9 LYEVLRVEPTTMISEIKMAYQSLAKVYHLDLSGNGRD----FIEIHKTYEMLSDPTARVV 64
YEVL + T EIK AY+ LA YH D + +D F EI + YE+LSDP R
Sbjct: 6 FYEVLGLSKTADEKEIKRAYKRLAMKYHPDRNQGDKDSESKFKEIKEAYEVLSDPQKRAA 65
Query: 65 YD 66
YD
Sbjct: 66 YD 67
>sp|B5YAR4|DNAJ_DICT6 Chaperone protein DnaJ OS=Dictyoglomus thermophilum (strain ATCC
35947 / DSM 3960 / H-6-12) GN=dnaJ PE=3 SV=1
Length = 390
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 5 TRGSLYEVLRVEPTTMISEIKMAYQSLAKVYHLDLSGN---GRDFIEIHKTYEMLSDPTA 61
T+ YE+L V EIK AY+ L + YH DL+ + F EI++ YE+LSDP
Sbjct: 3 TKKDYYEILGVPRNATQDEIKQAYRRLVRQYHPDLNKDPSAHEKFKEINEAYEVLSDPQK 62
Query: 62 RVVYD 66
R YD
Sbjct: 63 RAQYD 67
>sp|B9MJZ0|DNAJ_CALBD Chaperone protein DnaJ OS=Caldicellulosiruptor bescii (strain
ATCC BAA-1888 / DSM 6725 / Z-1320) GN=dnaJ PE=3 SV=1
Length = 388
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 3 LGTRGSLYEVLRVEPTTMISEIKMAYQSLAKVYHLDLSGNGRD----FIEIHKTYEMLSD 58
+ + YE+L V EIK AY+ LAK YH D + ++ F EI++ YE+LSD
Sbjct: 1 MAQKKDYYEILGVPRNATEEEIKRAYRRLAKQYHPDANPGNKEAEEKFKEINEAYEVLSD 60
Query: 59 PTARVVYD 66
P R +YD
Sbjct: 61 PEKRKLYD 68
>sp|Q9JMC3|DNJA4_MOUSE DnaJ homolog subfamily A member 4 OS=Mus musculus GN=Dnaja4 PE=2
SV=1
Length = 397
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 10 YEVLRVEPTTMISEIKMAYQSLAKVYHLDLSGN-GRDFIEIHKTYEMLSDPTARVVYD 66
Y++L V+P+ EIK AY+ LA YH D + + G F I + YE+LSDP R +YD
Sbjct: 8 YDILGVKPSASPEEIKKAYRKLALKYHPDKNPDEGEKFKLISQAYEVLSDPKKRDIYD 65
>sp|Q05646|DNAJ_ERYRH Chaperone protein DnaJ OS=Erysipelothrix rhusiopathiae GN=dnaJ
PE=2 SV=1
Length = 370
Score = 50.1 bits (118), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 3 LGTRGSLYEVLRVEPTTMISEIKMAYQSLAKVYHLDLS---GNGRDFIEIHKTYEMLSDP 59
+ + YE+L V + +EIK AY+ LAK YH D++ G F E+ + YE+LSD
Sbjct: 1 MADKRDFYEILGVSKSATDAEIKKAYRQLAKKYHPDINKEDGAEAKFKEVQEAYEVLSDS 60
Query: 60 TARVVYD 66
R YD
Sbjct: 61 QKRANYD 67
>sp|B1XQF6|DNAJ_SYNP2 Chaperone protein DnaJ OS=Synechococcus sp. (strain ATCC 27264 /
PCC 7002 / PR-6) GN=dnaJ PE=3 SV=1
Length = 378
Score = 50.1 bits (118), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 7 GSLYEVLRVEPTTMISEIKMAYQSLAKVYHLDLS---GNGRDFIEIHKTYEMLSDPTARV 63
G YE+L V E+K AY+ LA+ YH D++ G F EI++ YE+LS+P R
Sbjct: 3 GDFYEILGVSRDCGKDELKRAYRRLARQYHPDVNKDPGAEEKFKEINRAYEVLSEPETRA 62
Query: 64 VYD 66
YD
Sbjct: 63 RYD 65
>sp|Q5NVI9|DNJA1_PONAB DnaJ homolog subfamily A member 1 OS=Pongo abelii GN=DNAJA1 PE=2
SV=1
Length = 396
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 8 SLYEVLRVEPTTMISEIKMAYQSLAKVYHLDLSGN-GRDFIEIHKTYEMLSDPTARVVYD 66
+ Y+VL V+P E+K AY+ LA YH D + N G F +I + YE+LSD R +YD
Sbjct: 6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELYD 65
>sp|P31689|DNJA1_HUMAN DnaJ homolog subfamily A member 1 OS=Homo sapiens GN=DNAJA1 PE=1
SV=2
Length = 397
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 8 SLYEVLRVEPTTMISEIKMAYQSLAKVYHLDLSGN-GRDFIEIHKTYEMLSDPTARVVYD 66
+ Y+VL V+P E+K AY+ LA YH D + N G F +I + YE+LSD R +YD
Sbjct: 6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELYD 65
>sp|Q5E954|DNJA1_BOVIN DnaJ homolog subfamily A member 1 OS=Bos taurus GN=DNAJA1 PE=2
SV=2
Length = 397
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 8 SLYEVLRVEPTTMISEIKMAYQSLAKVYHLDLSGN-GRDFIEIHKTYEMLSDPTARVVYD 66
+ Y+VL V+P E+K AY+ LA YH D + N G F +I + YE+LSD R +YD
Sbjct: 6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELYD 65
>sp|Q95JF4|DNAJ1_CHLAE DnaJ homolog subfamily A member 1 OS=Chlorocebus aethiops
GN=DNAJA1 PE=2 SV=1
Length = 397
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 8 SLYEVLRVEPTTMISEIKMAYQSLAKVYHLDLSGN-GRDFIEIHKTYEMLSDPTARVVYD 66
+ Y+VL V+P E+K AY+ LA YH D + N G F +I + YE+LSD R +YD
Sbjct: 6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELYD 65
>sp|Q3AF07|DNAJ_CARHZ Chaperone protein DnaJ OS=Carboxydothermus hydrogenoformans
(strain Z-2901 / DSM 6008) GN=dnaJ PE=3 SV=1
Length = 381
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 10 YEVLRVEPTTMISEIKMAYQSLAKVYHLDLSGN----GRDFIEIHKTYEMLSDPTARVVY 65
YE+L V EIK AY+ LA+ YH D++ + F EI++ YE+LSDP R Y
Sbjct: 6 YEILGVARNATPEEIKKAYRKLARKYHPDVNKDDPNAAEKFKEINEAYEVLSDPEKRARY 65
Query: 66 D 66
D
Sbjct: 66 D 66
>sp|B7KEJ8|DNAJ_CYAP7 Chaperone protein DnaJ OS=Cyanothece sp. (strain PCC 7424)
GN=dnaJ PE=3 SV=1
Length = 375
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 7 GSLYEVLRVEPTTMISEIKMAYQSLAKVYHLDLS---GNGRDFIEIHKTYEMLSDPTARV 63
G YE+L V EIK AY+ LA+ YH D++ G F EI++ YE+LS+P R
Sbjct: 3 GDYYEILGVSRDANKDEIKRAYRRLARKYHPDVNKEIGAEERFKEINRAYEILSEPETRA 62
Query: 64 VYD 66
YD
Sbjct: 63 RYD 65
>sp|A0AIS3|DNAJ_LISW6 Chaperone protein DnaJ OS=Listeria welshimeri serovar 6b (strain
ATCC 35897 / DSM 20650 / SLCC5334) GN=dnaJ PE=3 SV=1
Length = 376
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 10 YEVLRVEPTTMISEIKMAYQSLAKVYHLDL---SGNGRDFIEIHKTYEMLSDPTARVVYD 66
YEVL + + EIK AY+ L+K YH D+ +G F EI + YE+LSD R YD
Sbjct: 7 YEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEVLSDSQKRAQYD 66
>sp|A4XKA5|DNAJ_CALS8 Chaperone protein DnaJ OS=Caldicellulosiruptor saccharolyticus
(strain ATCC 43494 / DSM 8903) GN=dnaJ PE=3 SV=1
Length = 387
Score = 49.3 bits (116), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 3 LGTRGSLYEVLRVEPTTMISEIKMAYQSLAKVYHLDLSGNGRD----FIEIHKTYEMLSD 58
+ + YE+L V EIK AY+ LAK YH D + ++ F EI++ YE+LSD
Sbjct: 1 MAQKKDYYEILGVPRNATQEEIKRAYRRLAKQYHPDANPGNKEAEEKFKEINEAYEVLSD 60
Query: 59 PTARVVYD 66
P R YD
Sbjct: 61 PEKRRKYD 68
>sp|O33529|DNAJ_RHILE Chaperone protein DnaJ (Fragment) OS=Rhizobium leguminosarum
GN=dnaJ PE=3 SV=1
Length = 234
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 5 TRGSLYEVLRVEPTTMISEIKMAYQSLAKVYHLDLSGNGRD----FIEIHKTYEMLSDPT 60
+ YE L V + E+K A++ LA +H D + + +D F EI++ YEML DP
Sbjct: 2 AKADFYETLGVAKSADEKELKSAFRKLAMKFHPDKNPDDKDAERKFKEINEAYEMLKDPQ 61
Query: 61 ARVVYD 66
R YD
Sbjct: 62 KRAAYD 67
>sp|Q5NSW9|DNAJ_BURM1 Chaperone protein DnaJ OS=Burkholderia multivorans (strain ATCC
17616 / 249) GN=dnaJ PE=3 SV=1
Length = 376
Score = 49.3 bits (116), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 10 YEVLRVEPTTMISEIKMAYQSLAKVYHLDLSGNGRD----FIEIHKTYEMLSDPTARVVY 65
YEVL V EIK AY+ LA YH D + + +D F E+ + YEMLSD R Y
Sbjct: 7 YEVLGVAKNASDDEIKKAYRKLAMKYHPDRNPDNKDAEEHFKEVKEAYEMLSDSQKRAAY 66
Query: 66 D 66
D
Sbjct: 67 D 67
>sp|Q49Y21|DNAJ_STAS1 Chaperone protein DnaJ OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=dnaJ
PE=3 SV=1
Length = 378
Score = 48.9 bits (115), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 10 YEVLRVEPTTMISEIKMAYQSLAKVYHLDLS---GNGRDFIEIHKTYEMLSDPTARVVYD 66
YEVL V + EIK AY+ L+K YH D++ G F EI + YE+LSD R YD
Sbjct: 7 YEVLGVSKSASKDEIKKAYRKLSKQYHPDINKEEGADEKFKEISEAYEVLSDENKRANYD 66
>sp|A7Z6W0|DNAJ_BACA2 Chaperone protein DnaJ OS=Bacillus amyloliquefaciens (strain
FZB42) GN=dnaJ PE=3 SV=1
Length = 375
Score = 48.9 bits (115), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 10 YEVLRVEPTTMISEIKMAYQSLAKVYHLDL---SGNGRDFIEIHKTYEMLSDPTARVVYD 66
YEVL V + EIK AY+ L+K YH D+ SG F E+ + YE LSD R YD
Sbjct: 7 YEVLGVSKSASKDEIKKAYRKLSKKYHPDINKESGADEKFKEVKEAYEALSDDQKRAQYD 66
>sp|Q8CP18|DNAJ_STAES Chaperone protein DnaJ OS=Staphylococcus epidermidis (strain ATCC
12228) GN=dnaJ PE=3 SV=1
Length = 373
Score = 48.9 bits (115), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 10 YEVLRVEPTTMISEIKMAYQSLAKVYHLDLS---GNGRDFIEIHKTYEMLSDPTARVVYD 66
YEVL V + EIK AY+ L+K YH D++ G F EI + YE+LSD R YD
Sbjct: 7 YEVLGVNKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDENKRANYD 66
>sp|B7JY68|DNAJ_CYAP8 Chaperone protein DnaJ OS=Cyanothece sp. (strain PCC 8801)
GN=dnaJ PE=3 SV=1
Length = 375
Score = 48.9 bits (115), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 7 GSLYEVLRVEPTTMISEIKMAYQSLAKVYHLDL---SGNGRDFIEIHKTYEMLSDPTARV 63
G YE L V+ +IK AY+ LA+ YH D+ +G F EI++ YE+LS+P R
Sbjct: 3 GDYYETLGVDRNASKEDIKRAYRRLARKYHPDINKEAGAEDRFKEINRAYEVLSEPETRA 62
Query: 64 VYD 66
YD
Sbjct: 63 RYD 65
>sp|Q835R5|DNAJ_ENTFA Chaperone protein DnaJ OS=Enterococcus faecalis (strain ATCC
700802 / V583) GN=dnaJ PE=3 SV=1
Length = 389
Score = 48.9 bits (115), Expect = 9e-06, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 3 LGTRGSLYEVLRVEPTTMISEIKMAYQSLAKVYHLDLSGNG---RDFIEIHKTYEMLSDP 59
+ T+ YEVL + EIK AY+ L+K YH D++ F E+ + YE+LSDP
Sbjct: 1 MATKRDYYEVLGLAKGASDDEIKKAYRKLSKKYHPDINKEADAEEKFKEVSEAYEVLSDP 60
Query: 60 TARVVYD 66
+ YD
Sbjct: 61 QKKAAYD 67
>sp|O34136|DNAJ_DEIPM Chaperone protein DnaJ OS=Deinococcus proteolyticus (strain ATCC
35074 / DSM 20540 / JCM 6276 / NBRC 101906 / NCIMB
13154 / VKM Ac-1939 / CCM 2703) GN=dnaJ PE=3 SV=2
Length = 310
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 10 YEVLRVEPTTMISEIKMAYQSLAKVYHLDLSGN----GRDFIEIHKTYEMLSDPTARVVY 65
YEVL V + S+IK AY+ LAK YH D + F EI + Y +LSDP R Y
Sbjct: 7 YEVLGVSRSASDSDIKSAYRKLAKQYHPDKNAGDESAAEKFKEIGEAYAVLSDPQKRQAY 66
Query: 66 DM 67
D
Sbjct: 67 DQ 68
>sp|P63036|DNJA1_RAT DnaJ homolog subfamily A member 1 OS=Rattus norvegicus GN=Dnaja1
PE=2 SV=1
Length = 397
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 8 SLYEVLRVEPTTMISEIKMAYQSLAKVYHLDLSGN-GRDFIEIHKTYEMLSDPTARVVYD 66
+ Y+VL V+P E+K AY+ LA YH D + N G F +I + YE+L+D R +YD
Sbjct: 6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLADSKKRELYD 65
>sp|P63037|DNJA1_MOUSE DnaJ homolog subfamily A member 1 OS=Mus musculus GN=Dnaja1 PE=1
SV=1
Length = 397
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 8 SLYEVLRVEPTTMISEIKMAYQSLAKVYHLDLSGN-GRDFIEIHKTYEMLSDPTARVVYD 66
+ Y+VL V+P E+K AY+ LA YH D + N G F +I + YE+L+D R +YD
Sbjct: 6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLADSKKRELYD 65
>sp|B2J3J3|DNAJ_NOSP7 Chaperone protein DnaJ OS=Nostoc punctiforme (strain ATCC 29133 /
PCC 73102) GN=dnaJ PE=3 SV=1
Length = 375
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 10 YEVLRVEPTTMISEIKMAYQSLAKVYHLDLS---GNGRDFIEIHKTYEMLSDPTARVVYD 66
YE+L V T E+K AY+ LA+ YH D++ G F EI++ YE+LS+P R YD
Sbjct: 6 YEILGVSRDTDKEELKQAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSEPETRARYD 65
>sp|P17631|DNAJ_BACSU Chaperone protein DnaJ OS=Bacillus subtilis (strain 168) GN=dnaJ
PE=2 SV=3
Length = 375
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 10 YEVLRVEPTTMISEIKMAYQSLAKVYHLDL---SGNGRDFIEIHKTYEMLSDPTARVVYD 66
YEVL V + EIK AY+ L+K YH D+ +G+ F E+ + YE LSD R YD
Sbjct: 7 YEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEAGSDEKFKEVKEAYETLSDDQKRAHYD 66
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,032,932
Number of Sequences: 539616
Number of extensions: 1255973
Number of successful extensions: 4159
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 441
Number of HSP's successfully gapped in prelim test: 457
Number of HSP's that attempted gapping in prelim test: 2927
Number of HSP's gapped (non-prelim): 928
length of query: 104
length of database: 191,569,459
effective HSP length: 73
effective length of query: 31
effective length of database: 152,177,491
effective search space: 4717502221
effective search space used: 4717502221
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)