BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040925
(833 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 141/441 (31%), Positives = 207/441 (46%), Gaps = 67/441 (15%)
Query: 1 LQTLAVNDNYLTGQLPDFVGNLSDLEVIRIMGNSLGGKIPTTLGLLRNLVSLNVAENKFS 60
L+ LA++ N ++G + V +LE + + N+ IP LG L L+++ NK S
Sbjct: 177 LKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLS 233
Query: 61 GMFPRSICNISSLELIQLALNRFSGNLPFDIVVNLPNLKALAIGGNNFFGSIPYSLSNAS 120
G F R+I + L+L+ ++ N+F G +P + L +L+ L++ N F G IP LS A
Sbjct: 234 GDFSRAISTCTELKLLNISSNQFVGPIP---PLPLKSLQYLSLAENKFTGEIPDFLSGAC 290
Query: 121 N-LELLDLSVNQFKGNVSIDFSSXXXXXXXXXXXXXXGTGTATDLDFVTFLTNCSSLKAL 179
+ L LDLS N F G V F S D L LK L
Sbjct: 291 DTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDT-----LLKMRGLKVL 345
Query: 180 SLADNQFGGELPHSIANLSSTVINFGIGRNQISG-------------------------- 213
L+ N+F GELP S+ NLS++++ + N SG
Sbjct: 346 DLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTG 405
Query: 214 TIPPGIRNLVNLIGFGAEENQLHGTIPDAIGELKNLQKLCLFRNFLQGRIPSGLGNLTKL 273
IPP + N L+ N L GTIP ++G L L+ L L+ N L+G IP L + L
Sbjct: 406 KIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTL 465
Query: 274 ANLELSSNSLQGNIPSSLGNCQNLMSFTASQNKLTGALPHQLLSITTXXXXXXXXXXXXX 333
L L N L G IPS L NC NL + S N+LTG +P
Sbjct: 466 ETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPK-------------------- 505
Query: 334 XXXXXQVGHLKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFHGVIPLSLSFLKS 393
+G L+NL IL +S+N FSG IP L C L +LD+++N F+G IP ++ F +S
Sbjct: 506 -----WIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM-FKQS 559
Query: 394 IKELNVSSNNLSGQIPEFLKN 414
K +++N ++G+ ++KN
Sbjct: 560 GK---IAANFIAGKRYVYIKN 577
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 136/506 (26%), Positives = 214/506 (42%), Gaps = 70/506 (13%)
Query: 1 LQTLAVNDNYLTGQLPDFVGNLSD-LEVIRIMGNSLGGKIPTTLGL-------------- 45
LQ L++ +N TG++PDF+ D L + + GN G +P G
Sbjct: 268 LQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNF 327
Query: 46 -----------LRNLVSLNVAENKFSGMFPRSICNIS-SLELIQLALNRFSGNLPFDIVV 93
+R L L+++ N+FSG P S+ N+S SL + L+ N FSG + ++
Sbjct: 328 SGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQ 387
Query: 94 NLPN-LKALAIGGNNFFGSIPYSLSNASNLELLDLSVNQFKGNVSIDFSSXXXXXXXXXX 152
N N L+ L + N F G IP +LSN S L L LS N G + S
Sbjct: 388 NPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLW 447
Query: 153 XXXXGTGTATDLDFVTFLTNCSSLKALSLADNQFGGELPHSIANLSSTVINF-GIGRNQI 211
+L +V +L+ L L N GE+P ++N T +N+ + N++
Sbjct: 448 LNMLEGEIPQELMYV------KTLETLILDFNDLTGEIPSGLSN--CTNLNWISLSNNRL 499
Query: 212 SGTIPPGIRNLVNLIGFGAEENQLHGTIPDAIGELKNLQKLCLFRNFLQGRIPSGLGNLT 271
+G IP I L NL N G IP +G+ ++L L L N G IP+ + +
Sbjct: 500 TGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQS 559
Query: 272 KLANLELSSNSLQGNIPSSLGN------CQ---NLMSFTASQ----NKLTGALPHQLLSI 318
++++N + G + N C NL+ F + N+L+ P + S
Sbjct: 560 G----KIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITS- 614
Query: 319 TTXXXXXXXXXXXXXXXXXXQVGHLKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSN 378
+ +++ LD+S N SG IP + + L L++ N
Sbjct: 615 -----------RVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHN 663
Query: 379 SFHGVIPLSLSFLKSIKELNVSSNNLSGQIPEFLKNLSVLEFLSLSYNHFEGEVPTKGVF 438
G IP + L+ + L++SSN L G+IP+ + L++L + LS N+ G +P G F
Sbjct: 664 DISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQF 723
Query: 439 SNKTKISLQGNMKLCGGIDELHLPSC 464
N LCG LP C
Sbjct: 724 ETFPPAKFLNNPGLCG----YPLPRC 745
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 184/424 (43%), Gaps = 78/424 (18%)
Query: 22 LSDLEVIRIMGNSLGGK------IPTTLGLLRNLVSLNVAENKFSGMFPRSICNISSLEL 75
L+ LEV+ + NS+ G + G L++L ++ NK SG S C +LE
Sbjct: 147 LNSLEVLDLSANSISGANVVGWVLSDGCGELKHLA---ISGNKISGDVDVSRC--VNLEF 201
Query: 76 IQLALNRFSGNLPFDIVVNLPNLKALAIGGNNFFGSIPYSLSNASNLELLDLSVNQFKGN 135
+ ++ N FS +PF + + L+ L I GN G ++S + L+LL++S NQF G
Sbjct: 202 LDVSSNNFSTGIPF--LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGP 259
Query: 136 VSIDFSSXXXXXXXXXXXXXXGTGTATDLDFVTFLTNCSSLKALSLADNQFGGELPHSIA 195
+ SL+ LSLA+N+F GE+P ++
Sbjct: 260 IPP--------------------------------LPLKSLQYLSLAENKFTGEIPDFLS 287
Query: 196 NLSSTVINFGIGRNQISGTIPPGIRNLVNLIGFGAEENQLHGTIP-DAIGELKNLQKLCL 254
T+ + N G +PP + L N G +P D + +++ L+ L L
Sbjct: 288 GACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDL 347
Query: 255 FRNFLQGRIPSGLGNLT-KLANLELSSNSLQGNIPSSLGNCQN----LMSFTASQNKLTG 309
N G +P L NL+ L L+LSSN+ G I +L CQN L N TG
Sbjct: 348 SFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNL--CQNPKNTLQELYLQNNGFTG 405
Query: 310 ALPHQLLSITTXXXXXXXXXXXXXXXXXXQVGHLKNLVILDISSNQFSGVIPGTLSTCVC 369
+P L + LV L +S N SG IP +L +
Sbjct: 406 KIPPTL-------------------------SNCSELVSLHLSFNYLSGTIPSSLGSLSK 440
Query: 370 LEYLDISSNSFHGVIPLSLSFLKSIKELNVSSNNLSGQIPEFLKNLSVLEFLSLSYNHFE 429
L L + N G IP L ++K+++ L + N+L+G+IP L N + L ++SLS N
Sbjct: 441 LRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLT 500
Query: 430 GEVP 433
GE+P
Sbjct: 501 GEIP 504
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 141/441 (31%), Positives = 207/441 (46%), Gaps = 67/441 (15%)
Query: 1 LQTLAVNDNYLTGQLPDFVGNLSDLEVIRIMGNSLGGKIPTTLGLLRNLVSLNVAENKFS 60
L+ LA++ N ++G + V +LE + + N+ IP LG L L+++ NK S
Sbjct: 180 LKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLS 236
Query: 61 GMFPRSICNISSLELIQLALNRFSGNLPFDIVVNLPNLKALAIGGNNFFGSIPYSLSNAS 120
G F R+I + L+L+ ++ N+F G +P + L +L+ L++ N F G IP LS A
Sbjct: 237 GDFSRAISTCTELKLLNISSNQFVGPIP---PLPLKSLQYLSLAENKFTGEIPDFLSGAC 293
Query: 121 N-LELLDLSVNQFKGNVSIDFSSXXXXXXXXXXXXXXGTGTATDLDFVTFLTNCSSLKAL 179
+ L LDLS N F G V F S D L LK L
Sbjct: 294 DTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDT-----LLKMRGLKVL 348
Query: 180 SLADNQFGGELPHSIANLSSTVINFGIGRNQISG-------------------------- 213
L+ N+F GELP S+ NLS++++ + N SG
Sbjct: 349 DLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTG 408
Query: 214 TIPPGIRNLVNLIGFGAEENQLHGTIPDAIGELKNLQKLCLFRNFLQGRIPSGLGNLTKL 273
IPP + N L+ N L GTIP ++G L L+ L L+ N L+G IP L + L
Sbjct: 409 KIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTL 468
Query: 274 ANLELSSNSLQGNIPSSLGNCQNLMSFTASQNKLTGALPHQLLSITTXXXXXXXXXXXXX 333
L L N L G IPS L NC NL + S N+LTG +P
Sbjct: 469 ETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPK-------------------- 508
Query: 334 XXXXXQVGHLKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFHGVIPLSLSFLKS 393
+G L+NL IL +S+N FSG IP L C L +LD+++N F+G IP ++ F +S
Sbjct: 509 -----WIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM-FKQS 562
Query: 394 IKELNVSSNNLSGQIPEFLKN 414
K +++N ++G+ ++KN
Sbjct: 563 GK---IAANFIAGKRYVYIKN 580
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 136/506 (26%), Positives = 214/506 (42%), Gaps = 70/506 (13%)
Query: 1 LQTLAVNDNYLTGQLPDFVGNLSD-LEVIRIMGNSLGGKIPTTLGL-------------- 45
LQ L++ +N TG++PDF+ D L + + GN G +P G
Sbjct: 271 LQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNF 330
Query: 46 -----------LRNLVSLNVAENKFSGMFPRSICNIS-SLELIQLALNRFSGNLPFDIVV 93
+R L L+++ N+FSG P S+ N+S SL + L+ N FSG + ++
Sbjct: 331 SGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQ 390
Query: 94 NLPN-LKALAIGGNNFFGSIPYSLSNASNLELLDLSVNQFKGNVSIDFSSXXXXXXXXXX 152
N N L+ L + N F G IP +LSN S L L LS N G + S
Sbjct: 391 NPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLW 450
Query: 153 XXXXGTGTATDLDFVTFLTNCSSLKALSLADNQFGGELPHSIANLSSTVINF-GIGRNQI 211
+L +V +L+ L L N GE+P ++N T +N+ + N++
Sbjct: 451 LNMLEGEIPQELMYV------KTLETLILDFNDLTGEIPSGLSN--CTNLNWISLSNNRL 502
Query: 212 SGTIPPGIRNLVNLIGFGAEENQLHGTIPDAIGELKNLQKLCLFRNFLQGRIPSGLGNLT 271
+G IP I L NL N G IP +G+ ++L L L N G IP+ + +
Sbjct: 503 TGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQS 562
Query: 272 KLANLELSSNSLQGNIPSSLGN------CQ---NLMSFTASQ----NKLTGALPHQLLSI 318
++++N + G + N C NL+ F + N+L+ P + S
Sbjct: 563 G----KIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITS- 617
Query: 319 TTXXXXXXXXXXXXXXXXXXQVGHLKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSN 378
+ +++ LD+S N SG IP + + L L++ N
Sbjct: 618 -----------RVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHN 666
Query: 379 SFHGVIPLSLSFLKSIKELNVSSNNLSGQIPEFLKNLSVLEFLSLSYNHFEGEVPTKGVF 438
G IP + L+ + L++SSN L G+IP+ + L++L + LS N+ G +P G F
Sbjct: 667 DISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQF 726
Query: 439 SNKTKISLQGNMKLCGGIDELHLPSC 464
N LCG LP C
Sbjct: 727 ETFPPAKFLNNPGLCG----YPLPRC 748
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 184/424 (43%), Gaps = 78/424 (18%)
Query: 22 LSDLEVIRIMGNSLGGK------IPTTLGLLRNLVSLNVAENKFSGMFPRSICNISSLEL 75
L+ LEV+ + NS+ G + G L++L ++ NK SG S C +LE
Sbjct: 150 LNSLEVLDLSANSISGANVVGWVLSDGCGELKHLA---ISGNKISGDVDVSRC--VNLEF 204
Query: 76 IQLALNRFSGNLPFDIVVNLPNLKALAIGGNNFFGSIPYSLSNASNLELLDLSVNQFKGN 135
+ ++ N FS +PF + + L+ L I GN G ++S + L+LL++S NQF G
Sbjct: 205 LDVSSNNFSTGIPF--LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGP 262
Query: 136 VSIDFSSXXXXXXXXXXXXXXGTGTATDLDFVTFLTNCSSLKALSLADNQFGGELPHSIA 195
+ SL+ LSLA+N+F GE+P ++
Sbjct: 263 IPP--------------------------------LPLKSLQYLSLAENKFTGEIPDFLS 290
Query: 196 NLSSTVINFGIGRNQISGTIPPGIRNLVNLIGFGAEENQLHGTIP-DAIGELKNLQKLCL 254
T+ + N G +PP + L N G +P D + +++ L+ L L
Sbjct: 291 GACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDL 350
Query: 255 FRNFLQGRIPSGLGNLT-KLANLELSSNSLQGNIPSSLGNCQN----LMSFTASQNKLTG 309
N G +P L NL+ L L+LSSN+ G I +L CQN L N TG
Sbjct: 351 SFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNL--CQNPKNTLQELYLQNNGFTG 408
Query: 310 ALPHQLLSITTXXXXXXXXXXXXXXXXXXQVGHLKNLVILDISSNQFSGVIPGTLSTCVC 369
+P L + LV L +S N SG IP +L +
Sbjct: 409 KIPPTL-------------------------SNCSELVSLHLSFNYLSGTIPSSLGSLSK 443
Query: 370 LEYLDISSNSFHGVIPLSLSFLKSIKELNVSSNNLSGQIPEFLKNLSVLEFLSLSYNHFE 429
L L + N G IP L ++K+++ L + N+L+G+IP L N + L ++SLS N
Sbjct: 444 LRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLT 503
Query: 430 GEVP 433
GE+P
Sbjct: 504 GEIP 507
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 159/342 (46%), Gaps = 48/342 (14%)
Query: 500 RKRRSAQKFVDTSPMEK------QFPMVSYAELSKATGEFSSSNMIGQGSFGYVYKGTLG 553
R+++ F D E Q S EL A+ FS+ N++G+G FG VYKG L
Sbjct: 1 RRKKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA 60
Query: 554 EDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFE 613
+ ++ ++ + +G F E E + HRNL+++ C + T+ + V+
Sbjct: 61 DGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP----TE-RLLVYP 115
Query: 614 YMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNV 673
YM NGS+ L + + L +R IA+ A + YLH HC P ++H D+K +N+
Sbjct: 116 YMANGSVASCLRERPESQ--PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANI 173
Query: 674 LLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDI 733
LLD + A V DFGLAK + K ++GT+G++APEY ++S D+
Sbjct: 174 LLDEEFEAVVGDFGLAKLMD-------YKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDV 226
Query: 734 F----------TGRRPIDAVF---NEGHSLHEFAKTALPEKVME-IVDPSLLMEVMTNNS 779
F TG+R D ++ L ++ K L EK +E +VD L
Sbjct: 227 FGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDL--------- 277
Query: 780 MIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKL 821
K EE + +I+ +LC+ SP ER M +VV L
Sbjct: 278 ----QGNYKDEE-VEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 150/319 (47%), Gaps = 42/319 (13%)
Query: 517 QFPMVSYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFV 576
Q S EL A+ F + N++G+G FG VYKG L + ++ ++ + +G F
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 577 AECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKL 636
E E + HRNL+++ C + T+ + V+ YM NGS+ L + + L
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTP----TE-RLLVYPYMANGSVASCLRERPESQP--PL 128
Query: 637 SLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQ 696
+R IA+ A + YLH HC P ++H D+K +N+LLD + A V DFGLAK +
Sbjct: 129 DWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD--- 185
Query: 697 LDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIF----------TGRRPIDAVF-- 744
K ++G +G++APEY ++S D+F TG+R D
Sbjct: 186 ----YKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLA 241
Query: 745 -NEGHSLHEFAKTALPEKVME-IVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVL 802
++ L ++ K L EK +E +VD L K EE + +I+ +L
Sbjct: 242 NDDDVMLLDWVKGLLKEKKLEALVDVDL-------------QGNYKDEE-VEQLIQVALL 287
Query: 803 CSMESPFERMDMRDVVAKL 821
C+ SP ER M +VV L
Sbjct: 288 CTQSSPMERPKMSEVVRML 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 141/319 (44%), Gaps = 47/319 (14%)
Query: 519 PMVSY----AELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRS 574
P SY +L +AT F +IG G FG VYKG L D VA+K +
Sbjct: 23 PFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPESSQGIEE 81
Query: 575 FVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVC 634
F E E L RH +L+ +I C + +++YMENG+LK L+ SD +
Sbjct: 82 FETEIETLSFCRHPHLVSLIGFCDERNEM-----ILIYKYMENGNLKRHLYGSD--LPTM 134
Query: 635 KLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSD 694
+S QR+ I I A + YLH ++H D+K N+LLD + V + DFG++K
Sbjct: 135 SMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK---- 187
Query: 695 HQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT----------GRRPI-DAV 743
T + +KGT+GY+ PEY + + D+++ R I ++
Sbjct: 188 --KGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSL 245
Query: 744 FNEGHSLHEFAKTALPEKVME-IVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVL 802
E +L E+A + +E IVDP+L ++ E L T V
Sbjct: 246 PREMVNLAEWAVESHNNGQLEQIVDPNLADKIRP--------------ESLRKFGDTAVK 291
Query: 803 CSMESPFERMDMRDVVAKL 821
C S +R M DV+ KL
Sbjct: 292 CLALSSEDRPSMGDVLWKL 310
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 141/319 (44%), Gaps = 47/319 (14%)
Query: 519 PMVSY----AELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRS 574
P SY +L +AT F +IG G FG VYKG L D VA+K +
Sbjct: 23 PFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPESSQGIEE 81
Query: 575 FVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVC 634
F E E L RH +L+ +I C + +++YMENG+LK L+ SD +
Sbjct: 82 FETEIETLSFCRHPHLVSLIGFCDERNEM-----ILIYKYMENGNLKRHLYGSD--LPTM 134
Query: 635 KLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSD 694
+S QR+ I I A + YLH ++H D+K N+LLD + V + DFG++K
Sbjct: 135 SMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK---- 187
Query: 695 HQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT----------GRRPI-DAV 743
T + +KGT+GY+ PEY + + D+++ R I ++
Sbjct: 188 --KGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSL 245
Query: 744 FNEGHSLHEFAKTALPEKVME-IVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVL 802
E +L E+A + +E IVDP+L ++ E L T V
Sbjct: 246 PREMVNLAEWAVESHNNGQLEQIVDPNLADKIRP--------------ESLRKFGDTAVK 291
Query: 803 CSMESPFERMDMRDVVAKL 821
C S +R M DV+ KL
Sbjct: 292 CLALSSEDRPSMGDVLWKL 310
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 106/203 (52%), Gaps = 20/203 (9%)
Query: 537 NMIGQGSFGYVYKGTL---GEDEMIVAVKVINLKY-KGASRSFVAECEALRNIRHRNLIK 592
+IG G FG V G L G+ E+ VA+K + Y + R F++E + H N+I
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAM 652
+ + + K T + E+MENGSL +L Q+D Q ++IQ V + +A+ M
Sbjct: 99 LEGVVT----KSTPV-MIITEFMENGSLDSFLRQNDGQ-----FTVIQLVGMLRGIAAGM 148
Query: 653 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKG 712
+YL VH DL N+L++ ++V V DFGL++FL D DT+ T +S++G K
Sbjct: 149 KYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED---DTSDPTYTSALGGKI 202
Query: 713 TVGYVAPEYGMGSEASMTGDIFT 735
+ + APE + + D+++
Sbjct: 203 PIRWTAPEAIQYRKFTSASDVWS 225
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 127/310 (40%), Gaps = 41/310 (13%)
Query: 159 GTATDLDFVTFLTNCSSLKALSLADNQFGGELPHSIANLSSTVINFGIGRNQISGTIPPG 218
G D D T+ N L L+L +P S+ANL + G N + G IPP
Sbjct: 40 GVLCDTDTQTYRVNNLDLSGLNLPKPY---PIPSSLANLPYLNFLYIGGINNLVGPIPPA 96
Query: 219 IRNLVNLIGFGAEENQLHGTIPDAIGELKNLQKLCLFRNFLQGRIPSGLGNLTKLANLEL 278
I L L + G IPD + ++K L L N L G +P + +L L +
Sbjct: 97 IAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITF 156
Query: 279 SSNSLQGNIPSSLGNCQNLM-SFTASQNKLTGALPHQLLSITTXXXXXXXXXXXXXXXXX 337
N + G IP S G+ L S T S+N+LTG +P ++
Sbjct: 157 DGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL------------------- 197
Query: 338 XQVGHLKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFH---GVIPLSLSFLKSI 394
NL +D+S N G + + + ++ NS G + LS K++
Sbjct: 198 -------NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLS----KNL 246
Query: 395 KELNVSSNNLSGQIPEFLKNLSVLEFLSLSYNHFEGEVPTKGVFSNKTKISLQGNMKLCG 454
L++ +N + G +P+ L L L L++S+N+ GE+P G + N LCG
Sbjct: 247 NGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCG 306
Query: 455 GIDELHLPSC 464
LP+C
Sbjct: 307 S----PLPAC 312
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 85/218 (38%), Gaps = 33/218 (15%)
Query: 1 LQTLAVNDNYLTGQLPDFVGNLSDLEVIRIMGNSLGGKIPTTLGLLRNLVSLNVAENKFS 60
L L + ++G +PDF+ + L + N+L G +P ++ L NLV + N+ S
Sbjct: 103 LHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRIS 162
Query: 61 GMFPRSICNISSLELIQLALNRFSGNLPFDIVVNLPNLKALAIGGNNFFGSIPYSLSNAS 120
G P S + S L ++ I N G IP + +N
Sbjct: 163 GAIPDSYGSFSKL------------------------FTSMTISRNRLTGKIPPTFANL- 197
Query: 121 NLELLDLSVNQFKGNVSIDFSSXXXXXXXXXXXXXXGTGTATDLDFVTFLTNCSSLKALS 180
NL +DLS N +G+ S+ F S A DL V N L L
Sbjct: 198 NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAK----NSLAFDLGKVGLSKN---LNGLD 250
Query: 181 LADNQFGGELPHSIANLSSTVINFGIGRNQISGTIPPG 218
L +N+ G LP + L + + + N + G IP G
Sbjct: 251 LRNNRIYGTLPQGLTQL-KFLHSLNVSFNNLCGEIPQG 287
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 105/203 (51%), Gaps = 20/203 (9%)
Query: 537 NMIGQGSFGYVYKGTL---GEDEMIVAVKVINLKY-KGASRSFVAECEALRNIRHRNLIK 592
+IG G FG V G L G+ E+ VA+K + Y + R F++E + H N+I
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAM 652
+ + + K T + E+MENGSL +L Q+D Q ++IQ V + +A+ M
Sbjct: 73 LEGVVT----KSTPV-MIITEFMENGSLDSFLRQNDGQ-----FTVIQLVGMLRGIAAGM 122
Query: 653 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKG 712
+YL VH L N+L++ ++V V DFGL++FL D DT+ T +S++G K
Sbjct: 123 KYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLED---DTSDPTYTSALGGKI 176
Query: 713 TVGYVAPEYGMGSEASMTGDIFT 735
+ + APE + + D+++
Sbjct: 177 PIRWTAPEAIQYRKFTSASDVWS 199
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 25/201 (12%)
Query: 539 IGQGSFGYVYKGTL-GEDEMIVAVKVINLKYKGASR--SFVAECEALRNIRHRNLIKII- 594
IG GSFG V++ G D VAVK++ + A R F+ E ++ +RH N++ +
Sbjct: 45 IGAGSFGTVHRAEWHGSD---VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
+ + + V EY+ GSL LH+S + + L +R+++A DVA M Y
Sbjct: 102 AVTQPPNL------SIVTEYLSRGSLYRLLHKSGAREQ---LDERRRLSMAYDVAKGMNY 152
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
LH+ PP+VH +LK N+L+D VCDFGL++ + L SS GT
Sbjct: 153 LHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFL--------SSKSAAGTP 203
Query: 715 GYVAPEYGMGSEASMTGDIFT 735
++APE ++ D+++
Sbjct: 204 EWMAPEVLRDEPSNEKSDVYS 224
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 100/201 (49%), Gaps = 25/201 (12%)
Query: 539 IGQGSFGYVYKGTL-GEDEMIVAVKVINLKYKGASR--SFVAECEALRNIRHRNLIKII- 594
IG GSFG V++ G D VAVK++ + A R F+ E ++ +RH N++ +
Sbjct: 45 IGAGSFGTVHRAEWHGSD---VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
+ + + V EY+ GSL LH+S + + L +R+++A DVA M Y
Sbjct: 102 AVTQPPNL------SIVTEYLSRGSLYRLLHKSGAREQ---LDERRRLSMAYDVAKGMNY 152
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
LH+ PP+VH DLK N+L+D VCDFGL++ + L + GT
Sbjct: 153 LHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAA--------GTP 203
Query: 715 GYVAPEYGMGSEASMTGDIFT 735
++APE ++ D+++
Sbjct: 204 EWMAPEVLRDEPSNEKSDVYS 224
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 98/188 (52%), Gaps = 22/188 (11%)
Query: 538 MIGQGSFGYVYKGTL---GEDEMIVAVKVINLKY-KGASRSFVAECEALRNIRHRNLIKI 593
+IG G FG V +G L G+ E VA+K + Y + R F++E + H N+I++
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 594 ITICSSTDFKGTDFKAFVF-EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAM 652
+ +++ + E+MENG+L +L +D Q ++IQ V + +AS M
Sbjct: 83 EGVVTNS------MPVMILTEFMENGALDSFLRLNDGQ-----FTVIQLVGMLRGIASGM 131
Query: 653 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKG 712
YL VH DL N+L++ ++V V DFGL++FL ++ D T +SS+G K
Sbjct: 132 RYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDP---TETSSLGGKI 185
Query: 713 TVGYVAPE 720
+ + APE
Sbjct: 186 PIRWTAPE 193
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 98/189 (51%), Gaps = 22/189 (11%)
Query: 537 NMIGQGSFGYVYKGTL---GEDEMIVAVKVINLKY-KGASRSFVAECEALRNIRHRNLIK 592
+IG G FG V +G L G+ E VA+K + Y + R F++E + H N+I+
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 593 IITICSSTDFKGTDFKAFVF-EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
+ + +++ + E+MENG+L +L +D Q ++IQ V + +AS
Sbjct: 80 LEGVVTNS------MPVMILTEFMENGALDSFLRLNDGQ-----FTVIQLVGMLRGIASG 128
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
M YL VH DL N+L++ ++V V DFGL++FL ++ D T +SS+G K
Sbjct: 129 MRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDP---TYTSSLGGK 182
Query: 712 GTVGYVAPE 720
+ + APE
Sbjct: 183 IPIRWTAPE 191
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 22/197 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+GQG FG V+ GT VA+K + + +F+ E + ++ +RH L+++ + S
Sbjct: 275 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
V EYM GSL D+L + L L Q V++A +AS M Y+
Sbjct: 333 EEPI------YIVTEYMSKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMAYVERM 382
Query: 659 CQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVA 718
VH DL+ +N+L+ ++V V DFGLA+ + D++ ++ G K + + A
Sbjct: 383 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 432
Query: 719 PEYGMGSEASMTGDIFT 735
PE + ++ D+++
Sbjct: 433 PEAALYGRFTIKSDVWS 449
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 22/197 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+GQG FG V+ GT VA+K + + +F+ E + ++ +RH L+++ + S
Sbjct: 19 LGQGCFGEVWMGTWN-GTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
V EYM GSL D+L + L L Q V++A +AS M Y+
Sbjct: 77 EEPI------YIVTEYMSKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMAYVERM 126
Query: 659 CQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVA 718
VH DL+ +N+L+ ++V V DFGLA+ + D++ ++ G K + + A
Sbjct: 127 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 176
Query: 719 PEYGMGSEASMTGDIFT 735
PE + ++ D+++
Sbjct: 177 PEAALYGRFTIKSDVWS 193
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 96/197 (48%), Gaps = 22/197 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+GQG FG V+ GT VA+K + + +F+ E + ++ IRH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPG-TMSPEAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
V EYM GSL D+L + L L Q V++A +AS M Y+
Sbjct: 84 EEPI------YIVTEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM 133
Query: 659 CQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVA 718
VH DL+ +N+L+ ++V V DFGLA+ + D++ ++ G K + + A
Sbjct: 134 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 183
Query: 719 PEYGMGSEASMTGDIFT 735
PE + ++ D+++
Sbjct: 184 PEAALYGRFTIKSDVWS 200
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 22/197 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+GQG FG V+ GT VA+K + + +F+ E + ++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
V EYM GSL D+L + L L Q V++A +AS M Y+
Sbjct: 84 EEPI------YIVIEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM 133
Query: 659 CQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVA 718
VH DL+ +N+L+ ++V V DFGLA+ + D++ ++ G K + + A
Sbjct: 134 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 183
Query: 719 PEYGMGSEASMTGDIFT 735
PE + ++ D+++
Sbjct: 184 PEAALYGRFTIKSDVWS 200
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 22/197 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+GQG FG V+ GT VA+K + + +F+ E + ++ +RH L+++ + S
Sbjct: 192 LGQGCFGEVWMGTWN-GTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
V EYM GSL D+L + L L Q V++A +AS M Y+
Sbjct: 250 EEPI------YIVTEYMSKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMAYVERM 299
Query: 659 CQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVA 718
VH DL+ +N+L+ ++V V DFGLA+ + D++ ++ G K + + A
Sbjct: 300 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 349
Query: 719 PEYGMGSEASMTGDIFT 735
PE + ++ D+++
Sbjct: 350 PEAALYGRFTIKSDVWS 366
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 22/197 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+GQG FG V+ GT VA+K + + +F+ E + ++ +RH L+++ + S
Sbjct: 192 LGQGCFGEVWMGTWN-GTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
V EYM GSL D+L + L L Q V++A +AS M Y+
Sbjct: 250 EEPI------YIVTEYMSKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMAYVERM 299
Query: 659 CQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVA 718
VH DL+ +N+L+ ++V V DFGLA+ + D++ ++ G K + + A
Sbjct: 300 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 349
Query: 719 PEYGMGSEASMTGDIFT 735
PE + ++ D+++
Sbjct: 350 PEAALYGRFTIKSDVWS 366
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 22/197 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+GQG FG V+ GT VA+K + + +F+ E + ++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
V EYM GSL D+L + L L Q V++A +AS M Y+
Sbjct: 84 EEPI------YIVIEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM 133
Query: 659 CQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVA 718
VH DL+ +N+L+ ++V V DFGLA+ + D++ ++ G K + + A
Sbjct: 134 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEX-------TARQGAKFPIKWTA 183
Query: 719 PEYGMGSEASMTGDIFT 735
PE + ++ D+++
Sbjct: 184 PEAALYGRFTIKSDVWS 200
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 96/197 (48%), Gaps = 22/197 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+GQG FG V+ GT VA+K + + +F+ E + ++ +RH L+++ + S
Sbjct: 23 LGQGCFGEVWMGTWN-GTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
V EYM GSL D+L + L L Q V+++ +AS M Y+
Sbjct: 81 EEPI------YIVTEYMNKGSLLDFLKGETGKY----LRLPQLVDMSAQIASGMAYVERM 130
Query: 659 CQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVA 718
VH DL+ +N+L+ ++V V DFGLA+ + D++ ++ G K + + A
Sbjct: 131 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEW-------TARQGAKFPIKWTA 180
Query: 719 PEYGMGSEASMTGDIFT 735
PE + ++ D+++
Sbjct: 181 PEAALYGRFTIKSDVWS 197
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 22/197 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+GQG FG V+ GT VA+K + + +F+ E + ++ +RH L+++ + S
Sbjct: 192 LGQGCFGEVWMGTWN-GTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
V EYM GSL D+L + L L Q V++A +AS M Y+
Sbjct: 250 EEPI------YIVGEYMSKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMAYVERM 299
Query: 659 CQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVA 718
VH DL+ +N+L+ ++V V DFGLA+ + D++ ++ G K + + A
Sbjct: 300 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 349
Query: 719 PEYGMGSEASMTGDIFT 735
PE + ++ D+++
Sbjct: 350 PEAALYGRFTIKSDVWS 366
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 95/192 (49%), Gaps = 23/192 (11%)
Query: 534 SSSNMIGQGSFGYVYKGTL----GEDEMIVAVKVINLKYKGASR-SFVAECEALRNIRHR 588
+ +IG G FG VYKG L G+ E+ VA+K + Y R F+ E + H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N+I++ + S +K + EYMENG+L +L + D + S++Q V + +
Sbjct: 107 NIIRLEGVISK--YKPM---MIITEYMENGALDKFLREKDGE-----FSVLQLVGMLRGI 156
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
A+ M+YL + VH DL N+L++ ++V V DFGL++ L D T +
Sbjct: 157 AAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTS----- 208
Query: 709 GLKGTVGYVAPE 720
G K + + APE
Sbjct: 209 GGKIPIRWTAPE 220
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 96/197 (48%), Gaps = 22/197 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+GQG FG V+ GT VA+K + + +F+ E + ++ +RH L+++ + S
Sbjct: 23 LGQGCFGEVWMGTWN-GTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
V EYM GSL D+L + L L Q V+++ +AS M Y+
Sbjct: 81 EEPI------YIVTEYMNKGSLLDFLKGETGKY----LRLPQLVDMSAQIASGMAYVERM 130
Query: 659 CQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVA 718
VH DL+ +N+L+ ++V V DFGLA+ + D++ ++ G K + + A
Sbjct: 131 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 180
Query: 719 PEYGMGSEASMTGDIFT 735
PE + ++ D+++
Sbjct: 181 PEAALYGRFTIKSDVWS 197
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 22/197 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+GQG FG V+ GT VA+K + + +F+ E + ++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
V EYM GSL D+L + L L Q V++A +AS M Y+
Sbjct: 84 EEPI------YIVTEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM 133
Query: 659 CQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVA 718
VH DL+ +N+L+ ++V V DFGLA+ + D++ ++ G K + + A
Sbjct: 134 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 183
Query: 719 PEYGMGSEASMTGDIFT 735
PE + ++ D+++
Sbjct: 184 PEAALYGRFTIKSDVWS 200
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 110/233 (47%), Gaps = 34/233 (14%)
Query: 515 EKQFPMVSYAELSKATGEFSSS------NMIGQGSFGYVYKGTLGEDEMIVAVK----VI 564
+ +F S+ EL T F N +G+G FG VYKG + + VAVK ++
Sbjct: 9 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMV 66
Query: 565 NLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWL 624
++ + + F E + + +H NL++++ S G D V+ YM NGSL D L
Sbjct: 67 DITTEELKQQFDQEIKVMAKCQHENLVELLGFSSD----GDDL-CLVYVYMPNGSLLDRL 121
Query: 625 HQSDDQVEVCKLSLIQRVNIAIDVASAMEYLH--HHCQPPMVHGDLKPSNVLLDHDMVAH 682
D LS R IA A+ + +LH HH +H D+K +N+LLD A
Sbjct: 122 SCLDG---TPPLSWHMRCKIAQGAANGINFLHENHH-----IHRDIKSANILLDEAFTAK 173
Query: 683 VCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
+ DFGLA+ S+ T + + + GT Y+APE + E + DI++
Sbjct: 174 ISDFGLAR-ASEKFAQTVMXSR-----IVGTTAYMAPE-ALRGEITPKSDIYS 219
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 22/197 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+GQG FG V+ GT VA+K + + +F+ E + ++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
V EYM GSL D+L + L L Q V++A +AS M Y+
Sbjct: 84 EEPI------YIVCEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM 133
Query: 659 CQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVA 718
VH DL+ +N+L+ ++V V DFGLA+ + D++ ++ G K + + A
Sbjct: 134 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 183
Query: 719 PEYGMGSEASMTGDIFT 735
PE + ++ D+++
Sbjct: 184 PEAALYGRFTIKSDVWS 200
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 92/196 (46%), Gaps = 33/196 (16%)
Query: 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASR--SFVAECEALRNIRHR 588
G+ + IG GSFG VYKG D VAVK++N+ + +F E LR RH
Sbjct: 24 GQITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 80
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N++ + + A V ++ E SL LH S+ + E+ KL ++IA
Sbjct: 81 NILLFMGYSTKPQL------AIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQT 129
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA----KFLSDHQLDTAVKTP 704
A M+YLH ++H DLK +N+ L D + DFGLA ++ HQ +
Sbjct: 130 ARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ----- 181
Query: 705 SSSIGLKGTVGYVAPE 720
L G++ ++APE
Sbjct: 182 -----LSGSILWMAPE 192
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 93/196 (47%), Gaps = 33/196 (16%)
Query: 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASR--SFVAECEALRNIRHR 588
G+ + IG GSFG VYKG D VAVK++N+ + +F E LR RH
Sbjct: 24 GQITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 80
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N++ + ++ A V ++ E SL LH S+ + E+ KL ++IA
Sbjct: 81 NILLFMGYSTAPQL------AIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQT 129
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA----KFLSDHQLDTAVKTP 704
A M+YLH ++H DLK +N+ L D + DFGLA ++ HQ +
Sbjct: 130 ARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ----- 181
Query: 705 SSSIGLKGTVGYVAPE 720
L G++ ++APE
Sbjct: 182 -----LSGSILWMAPE 192
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 92/196 (46%), Gaps = 33/196 (16%)
Query: 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASR--SFVAECEALRNIRHR 588
G+ + IG GSFG VYKG D VAVK++N+ + +F E LR RH
Sbjct: 12 GQITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 68
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N++ + + A V ++ E SL LH S+ + E+ KL ++IA
Sbjct: 69 NILLFMGYSTKPQL------AIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQT 117
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA----KFLSDHQLDTAVKTP 704
A M+YLH ++H DLK +N+ L D + DFGLA ++ HQ +
Sbjct: 118 ARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQ----- 169
Query: 705 SSSIGLKGTVGYVAPE 720
L G++ ++APE
Sbjct: 170 -----LSGSILWMAPE 180
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 109/233 (46%), Gaps = 34/233 (14%)
Query: 515 EKQFPMVSYAELSKATGEFSSS------NMIGQGSFGYVYKGTLGEDEMIVAVK----VI 564
+ +F S+ EL T F N +G+G FG VYKG + + VAVK ++
Sbjct: 9 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMV 66
Query: 565 NLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWL 624
++ + + F E + + +H NL++++ S G D V+ YM NGSL D L
Sbjct: 67 DITTEELKQQFDQEIKVMAKCQHENLVELLGFSSD----GDDL-CLVYVYMPNGSLLDRL 121
Query: 625 HQSDDQVEVCKLSLIQRVNIAIDVASAMEYLH--HHCQPPMVHGDLKPSNVLLDHDMVAH 682
D LS R IA A+ + +LH HH +H D+K +N+LLD A
Sbjct: 122 SCLDG---TPPLSWHMRCKIAQGAANGINFLHENHH-----IHRDIKSANILLDEAFTAK 173
Query: 683 VCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
+ DFGLA+ S+ T + + GT Y+APE + E + DI++
Sbjct: 174 ISDFGLAR-ASEKFAQTVMXXR-----IVGTTAYMAPE-ALRGEITPKSDIYS 219
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 33/196 (16%)
Query: 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASR--SFVAECEALRNIRHR 588
G+ + IG GSFG VYKG D VAVK++N+ + +F E LR RH
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 64
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N++ + ++ A V ++ E SL LH + + E+ KL ++IA
Sbjct: 65 NILLFMGYSTAPQL------AIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQT 113
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA----KFLSDHQLDTAVKTP 704
A M+YLH ++H DLK +N+ L D+ + DFGLA ++ HQ +
Sbjct: 114 AQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ----- 165
Query: 705 SSSIGLKGTVGYVAPE 720
L G++ ++APE
Sbjct: 166 -----LSGSILWMAPE 176
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 95/197 (48%), Gaps = 22/197 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+GQG FG V+ GT VA+K + + +F+ E + ++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
V EYM G L D+L + L L Q V++A +AS M Y+
Sbjct: 84 EEPI------YIVMEYMSKGCLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM 133
Query: 659 CQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVA 718
VH DL+ +N+L+ ++V V DFGLA+ + D++ ++ G K + + A
Sbjct: 134 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 183
Query: 719 PEYGMGSEASMTGDIFT 735
PE + ++ D+++
Sbjct: 184 PEAALYGRFTIKSDVWS 200
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 33/196 (16%)
Query: 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASR--SFVAECEALRNIRHR 588
G+ + IG GSFG VYKG D VAVK++N+ + +F E LR RH
Sbjct: 28 GQITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 84
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N++ + + A V ++ E SL LH + + E+ KL ++IA
Sbjct: 85 NILLFMGYSTKPQL------AIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQT 133
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA----KFLSDHQLDTAVKTP 704
A M+YLH ++H DLK +N+ L D+ + DFGLA ++ HQ +
Sbjct: 134 AQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ----- 185
Query: 705 SSSIGLKGTVGYVAPE 720
L G++ ++APE
Sbjct: 186 -----LSGSILWMAPE 196
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 22/197 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+GQG FG V+ GT VA+K + + +F+ E + ++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
V EYM GSL D+L + L L Q V++A +AS M Y+
Sbjct: 84 EEPI------YIVTEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM 133
Query: 659 CQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVA 718
VH DL +N+L+ ++V V DFGLA+ + D++ ++ G K + + A
Sbjct: 134 N---YVHRDLAAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 183
Query: 719 PEYGMGSEASMTGDIFT 735
PE + ++ D+++
Sbjct: 184 PEAALYGRFTIKSDVWS 200
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 108/233 (46%), Gaps = 34/233 (14%)
Query: 515 EKQFPMVSYAELSKATGEFSSS------NMIGQGSFGYVYKGTLGEDEMIVAVK----VI 564
+ +F S+ EL T F N +G+G FG VYKG + + VAVK ++
Sbjct: 3 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMV 60
Query: 565 NLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWL 624
++ + + F E + + +H NL++++ S G D V+ YM NGSL D L
Sbjct: 61 DITTEELKQQFDQEIKVMAKCQHENLVELLGFSSD----GDDL-CLVYVYMPNGSLLDRL 115
Query: 625 HQSDDQVEVCKLSLIQRVNIAIDVASAMEYLH--HHCQPPMVHGDLKPSNVLLDHDMVAH 682
D LS R IA A+ + +LH HH +H D+K +N+LLD A
Sbjct: 116 SCLDG---TPPLSWHMRCKIAQGAANGINFLHENHH-----IHRDIKSANILLDEAFTAK 167
Query: 683 VCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
+ DFGLA+ + + V + GT Y+APE + E + DI++
Sbjct: 168 ISDFGLAR--ASEKFAQXVMXXR----IVGTTAYMAPE-ALRGEITPKSDIYS 213
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 33/196 (16%)
Query: 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASR--SFVAECEALRNIRHR 588
G+ + IG GSFG VYKG D VAVK++N+ + +F E LR RH
Sbjct: 13 GQITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 69
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N++ + + A V ++ E SL LH + + E+ KL ++IA
Sbjct: 70 NILLFMGYSTKPQL------AIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQT 118
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA----KFLSDHQLDTAVKTP 704
A M+YLH ++H DLK +N+ L D+ + DFGLA ++ HQ +
Sbjct: 119 AQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ----- 170
Query: 705 SSSIGLKGTVGYVAPE 720
L G++ ++APE
Sbjct: 171 -----LSGSILWMAPE 181
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 33/196 (16%)
Query: 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASR--SFVAECEALRNIRHR 588
G+ + IG GSFG VYKG D VAVK++N+ + +F E LR RH
Sbjct: 10 GQITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 66
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N++ + + A V ++ E SL LH + + E+ KL ++IA
Sbjct: 67 NILLFMGYSTKPQL------AIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQT 115
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA----KFLSDHQLDTAVKTP 704
A M+YLH ++H DLK +N+ L D+ + DFGLA ++ HQ +
Sbjct: 116 AQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ----- 167
Query: 705 SSSIGLKGTVGYVAPE 720
L G++ ++APE
Sbjct: 168 -----LSGSILWMAPE 178
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 33/196 (16%)
Query: 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASR--SFVAECEALRNIRHR 588
G+ + IG GSFG VYKG D VAVK++N+ + +F E LR RH
Sbjct: 36 GQITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 92
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N++ + + A V ++ E SL LH + + E+ KL ++IA
Sbjct: 93 NILLFMGYSTKPQL------AIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQT 141
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA----KFLSDHQLDTAVKTP 704
A M+YLH ++H DLK +N+ L D+ + DFGLA ++ HQ +
Sbjct: 142 AQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ----- 193
Query: 705 SSSIGLKGTVGYVAPE 720
L G++ ++APE
Sbjct: 194 -----LSGSILWMAPE 204
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 33/196 (16%)
Query: 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASR--SFVAECEALRNIRHR 588
G+ + IG GSFG VYKG D VAVK++N+ + +F E LR RH
Sbjct: 35 GQITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 91
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N++ + + A V ++ E SL LH + + E+ KL ++IA
Sbjct: 92 NILLFMGYSTKPQL------AIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQT 140
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA----KFLSDHQLDTAVKTP 704
A M+YLH ++H DLK +N+ L D+ + DFGLA ++ HQ +
Sbjct: 141 AQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ----- 192
Query: 705 SSSIGLKGTVGYVAPE 720
L G++ ++APE
Sbjct: 193 -----LSGSILWMAPE 203
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 33/196 (16%)
Query: 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASR--SFVAECEALRNIRHR 588
G+ + IG GSFG VYKG D VAVK++N+ + +F E LR RH
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 64
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N++ + + A V ++ E SL LH + + E+ KL ++IA
Sbjct: 65 NILLFMGYSTKPQL------AIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQT 113
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA----KFLSDHQLDTAVKTP 704
A M+YLH ++H DLK +N+ L D+ + DFGLA ++ HQ +
Sbjct: 114 AQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ----- 165
Query: 705 SSSIGLKGTVGYVAPE 720
L G++ ++APE
Sbjct: 166 -----LSGSILWMAPE 176
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 33/196 (16%)
Query: 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASR--SFVAECEALRNIRHR 588
G+ + IG GSFG VYKG D VAVK++N+ + +F E LR RH
Sbjct: 13 GQITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 69
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N++ + + A V ++ E SL LH + + E+ KL ++IA
Sbjct: 70 NILLFMGYSTKPQL------AIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQT 118
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA----KFLSDHQLDTAVKTP 704
A M+YLH ++H DLK +N+ L D+ + DFGLA ++ HQ +
Sbjct: 119 AQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ----- 170
Query: 705 SSSIGLKGTVGYVAPE 720
L G++ ++APE
Sbjct: 171 -----LSGSILWMAPE 181
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 33/196 (16%)
Query: 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASR--SFVAECEALRNIRHR 588
G+ + IG GSFG VYKG D VAVK++N+ + +F E LR RH
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 64
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N++ + + A V ++ E SL LH + + E+ KL ++IA
Sbjct: 65 NILLFMGYSTKPQL------AIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQT 113
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA----KFLSDHQLDTAVKTP 704
A M+YLH ++H DLK +N+ L D+ + DFGLA ++ HQ +
Sbjct: 114 AQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ----- 165
Query: 705 SSSIGLKGTVGYVAPE 720
L G++ ++APE
Sbjct: 166 -----LSGSILWMAPE 176
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 24/198 (12%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+GQG FG V+ GT VA+K + + +F+ E + ++ +RH L+++ + S
Sbjct: 193 LGQGCFGEVWMGTWN-GTTRVAIKTLKPG-NMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCK-LSLIQRVNIAIDVASAMEYLHH 657
V EYM GSL D+L + E+ K L L Q V++A +AS M Y+
Sbjct: 251 EEPI------YIVTEYMSKGSLLDFL-----KGEMGKYLRLPQLVDMAAQIASGMAYVER 299
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
VH DL+ +N+L+ ++V V DFGL + + D++ ++ G K + +
Sbjct: 300 MN---YVHRDLRAANILVGENLVCKVADFGLGRLIEDNEY-------TARQGAKFPIKWT 349
Query: 718 APEYGMGSEASMTGDIFT 735
APE + ++ D+++
Sbjct: 350 APEAALYGRFTIKSDVWS 367
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 33/196 (16%)
Query: 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASR--SFVAECEALRNIRHR 588
G+ + IG GSFG VYKG D VAVK++N+ + +F E LR RH
Sbjct: 36 GQITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 92
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N++ + + A V ++ E SL LH + + E+ KL ++IA
Sbjct: 93 NILLFMGYSTKPQL------AIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQT 141
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA----KFLSDHQLDTAVKTP 704
A M+YLH ++H DLK +N+ L D+ + DFGLA ++ HQ +
Sbjct: 142 AQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ----- 193
Query: 705 SSSIGLKGTVGYVAPE 720
L G++ ++APE
Sbjct: 194 -----LSGSILWMAPE 204
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 93/192 (48%), Gaps = 22/192 (11%)
Query: 538 MIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRN--IRHRNLIKIIT 595
+IG+G +G VYKG+L DE VAVKV + + ++F+ E R + H N+ + I
Sbjct: 20 LIGRGRYGAVYKGSL--DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIV 74
Query: 596 ICSSTDFKGTDFKAFVFEYMENGSLKDWLH-QSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
G V EY NGSL +L + D V C+L A V + Y
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRL--------AHSVTRGLAY 126
Query: 655 LH------HHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
LH H +P + H DL NVL+ +D + DFGL+ L+ ++L + +++I
Sbjct: 127 LHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAI 186
Query: 709 GLKGTVGYVAPE 720
GT+ Y+APE
Sbjct: 187 SEVGTIRYMAPE 198
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 95/197 (48%), Gaps = 22/197 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+GQG FG V+ GT VA+K + + +F+ E + ++ +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
V EYM G L D+L + L L Q V++A +AS M Y+
Sbjct: 84 EEPI------YIVTEYMSKGCLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM 133
Query: 659 CQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVA 718
VH DL+ +N+L+ ++V V DFGLA+ + D++ ++ G K + + A
Sbjct: 134 N---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWTA 183
Query: 719 PEYGMGSEASMTGDIFT 735
PE + ++ D+++
Sbjct: 184 PEAALYGRFTIKSDVWS 200
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 80.1 bits (196), Expect = 5e-15, Method: Composition-based stats.
Identities = 55/197 (27%), Positives = 97/197 (49%), Gaps = 22/197 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+GQG FG V+ GT VA+K + + +F+ E + ++ +RH L+++ + S
Sbjct: 16 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
V EYM GSL D+L + L L Q V++A +AS M Y+
Sbjct: 74 EEPI------XIVTEYMSKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMAYVE-- 121
Query: 659 CQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVA 718
+ VH DL+ +N+L+ ++V V DFGLA+ + D++ ++ G K + + A
Sbjct: 122 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEX-------TARQGAKFPIKWTA 173
Query: 719 PEYGMGSEASMTGDIFT 735
PE + ++ D+++
Sbjct: 174 PEAALYGRFTIKSDVWS 190
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 135/301 (44%), Gaps = 49/301 (16%)
Query: 522 SYAELSKATGEFSSS---------NMIGQGSFGYVYKGTL---GEDEMIVAVKVINLKY- 568
+Y + ++A EF+ +IG G FG V G L G+ E+ VA+K + + Y
Sbjct: 4 TYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT 63
Query: 569 KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSD 628
+ R F+ E + H N+I + + + + V EYMENGSL +L ++D
Sbjct: 64 EKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPV-----MIVTEYMENGSLDTFLKKND 118
Query: 629 DQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688
Q ++IQ V + +++ M+YL VH DL N+L++ ++V V DFGL
Sbjct: 119 GQ-----FTVIQLVGMLRGISAGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGL 170
Query: 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT-----------GR 737
++ L D + A T I ++ T APE + + D+++ G
Sbjct: 171 SRVLEDDP-EAAYTTRGGKIPIRWT----APEAIAFRKFTSASDVWSYGIVMWEVVSYGE 225
Query: 738 RPIDAVFNEG--HSLHEFAKTALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNA 795
RP + N+ ++ E + P P+ L ++M + + + R K +E +N
Sbjct: 226 RPYWEMTNQDVIKAVEEGYRLPSPMDC-----PAALYQLMLDCWQKERNSRPKFDEIVNM 280
Query: 796 I 796
+
Sbjct: 281 L 281
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 79.0 bits (193), Expect = 1e-14, Method: Composition-based stats.
Identities = 57/198 (28%), Positives = 100/198 (50%), Gaps = 24/198 (12%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+GQG FG V+ GT VA+K + + +F+ E + ++ +RH L+++ + S
Sbjct: 15 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCK-LSLIQRVNIAIDVASAMEYLHH 657
V EYM GSL D+L + E+ K L L Q V++A +AS M Y+
Sbjct: 73 EEPI------YIVTEYMSKGSLLDFL-----KGEMGKYLRLPQLVDMAAQIASGMAYVE- 120
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+ VH DL+ +N+L+ ++V V DFGLA+ + D++ ++ G K + +
Sbjct: 121 --RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWT 171
Query: 718 APEYGMGSEASMTGDIFT 735
APE + ++ D+++
Sbjct: 172 APEAALYGRFTIKSDVWS 189
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 79.0 bits (193), Expect = 1e-14, Method: Composition-based stats.
Identities = 57/198 (28%), Positives = 100/198 (50%), Gaps = 24/198 (12%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+GQG FG V+ GT VA+K + + +F+ E + ++ +RH L+++ + S
Sbjct: 17 LGQGCFGEVWMGTWNGTTR-VAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCK-LSLIQRVNIAIDVASAMEYLHH 657
V EYM GSL D+L + E+ K L L Q V++A +AS M Y+
Sbjct: 75 EEPI------YIVTEYMSKGSLLDFL-----KGEMGKYLRLPQLVDMAAQIASGMAYVE- 122
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+ VH DL+ +N+L+ ++V V DFGLA+ + D++ ++ G K + +
Sbjct: 123 --RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIKWT 173
Query: 718 APEYGMGSEASMTGDIFT 735
APE + ++ D+++
Sbjct: 174 APEAALYGRFTIKSDVWS 191
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 100/214 (46%), Gaps = 22/214 (10%)
Query: 506 QKFVDTSPMEKQFPMVSYAELSKA--TGEFSSSNMIGQGSFGYVYKGTL---GEDEMIVA 560
+ FVD E P + E +K S ++G G FG V G L + E+ VA
Sbjct: 20 RTFVDPHTFED--PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVA 77
Query: 561 VKVINLKY-KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGS 619
+K + + Y + R F+ E + H N+I++ + + + V EYMENGS
Sbjct: 78 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV-----MIVTEYMENGS 132
Query: 620 LKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM 679
L +L + D Q ++IQ V + +AS M+YL VH DL N+L++ ++
Sbjct: 133 LDSFLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNL 184
Query: 680 VAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGT 713
V V DFGLA+ L D + A T I ++ T
Sbjct: 185 VCKVSDFGLARVLEDDP-EAAYTTRGGKIPIRWT 217
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 101/224 (45%), Gaps = 28/224 (12%)
Query: 532 EFSSSNMIGQGSFGYVYKG-TLGEDEMIVAVKVINLKYKGA--SRSFVAECEALRNIRHR 588
E + IG G FG V+ G L +D+ VA+K I +GA F+ E E + + H
Sbjct: 6 ELTFVQEIGSGQFGLVHLGYWLNKDK--VAIKTIR---EGAMSEEDFIEEAEVMMKLSHP 60
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
L+++ +C VFE+ME+G L D+L L + + +DV
Sbjct: 61 KLVQLYGVCLEQAPI-----CLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDV 110
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
M YL C ++H DL N L+ + V V DFG+ +F+ D Q +SS
Sbjct: 111 CEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-------TSST 160
Query: 709 GLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHE 752
G K V + +PE S S D+++ + VF+EG +E
Sbjct: 161 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 204
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 101/224 (45%), Gaps = 28/224 (12%)
Query: 532 EFSSSNMIGQGSFGYVYKG-TLGEDEMIVAVKVINLKYKGA--SRSFVAECEALRNIRHR 588
E + IG G FG V+ G L +D+ VA+K I +GA F+ E E + + H
Sbjct: 8 ELTFVQEIGSGQFGLVHLGYWLNKDK--VAIKTIR---EGAMSEEDFIEEAEVMMKLSHP 62
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
L+++ +C VFE+ME+G L D+L L + + +DV
Sbjct: 63 KLVQLYGVCLEQAPI-----CLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDV 112
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
M YL C ++H DL N L+ + V V DFG+ +F+ D Q +SS
Sbjct: 113 CEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-------TSST 162
Query: 709 GLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHE 752
G K V + +PE S S D+++ + VF+EG +E
Sbjct: 163 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 206
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 101/224 (45%), Gaps = 28/224 (12%)
Query: 532 EFSSSNMIGQGSFGYVYKG-TLGEDEMIVAVKVINLKYKGA--SRSFVAECEALRNIRHR 588
E + IG G FG V+ G L +D+ VA+K I +GA F+ E E + + H
Sbjct: 11 ELTFVQEIGSGQFGLVHLGYWLNKDK--VAIKTIR---EGAMSEEDFIEEAEVMMKLSHP 65
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
L+++ +C VFE+ME+G L D+L L + + +DV
Sbjct: 66 KLVQLYGVCLEQAPI-----CLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDV 115
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
M YL C ++H DL N L+ + V V DFG+ +F+ D Q +SS
Sbjct: 116 CEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-------TSST 165
Query: 709 GLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHE 752
G K V + +PE S S D+++ + VF+EG +E
Sbjct: 166 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 209
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 131/304 (43%), Gaps = 38/304 (12%)
Query: 539 IGQGSFGYV----YKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKII 594
+G+G+FG V Y +VAVK + + R F E E L++++H N++K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
+C S G + EY+ GSL+D+L + ++++ KL + + MEY
Sbjct: 96 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 147
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L +H DL N+L++++ + DFGL K L + VK P S +
Sbjct: 148 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----PI 199
Query: 715 GYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSL---- 770
+ APE S+ S+ D+++ V E + E +K+ P + M ++
Sbjct: 200 FWYAPESLTESKFSVASDVWS----FGVVLYELFTYIEKSKSP-PAEFMRMIGNDKQGQM 254
Query: 771 ----LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRE 826
L+E++ NN + + + C + I C + +R RD+ ++ R+
Sbjct: 255 IVFHLIELLKNNGRLP-----RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 309
Query: 827 TFLG 830
G
Sbjct: 310 NMAG 313
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 131/304 (43%), Gaps = 38/304 (12%)
Query: 539 IGQGSFGYV----YKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKII 594
+G+G+FG V Y +VAVK + + R F E E L++++H N++K
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
+C S G + EY+ GSL+D+L + ++++ KL + + MEY
Sbjct: 85 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 136
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L +H DL N+L++++ + DFGL K L + VK P S +
Sbjct: 137 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----PI 188
Query: 715 GYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSL---- 770
+ APE S+ S+ D+++ V E + E +K+ P + M ++
Sbjct: 189 FWYAPESLTESKFSVASDVWS----FGVVLYELFTYIEKSKSP-PAEFMRMIGNDKQGQM 243
Query: 771 ----LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRE 826
L+E++ NN + + + C + I C + +R RD+ ++ R+
Sbjct: 244 IVFHLIELLKNNGRLP-----RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 298
Query: 827 TFLG 830
G
Sbjct: 299 NMAG 302
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 131/304 (43%), Gaps = 38/304 (12%)
Query: 539 IGQGSFGYV----YKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKII 594
+G+G+FG V Y +VAVK + + R F E E L++++H N++K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
+C S G + EY+ GSL+D+L + ++++ KL + + MEY
Sbjct: 78 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 129
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L +H DL N+L++++ + DFGL K L + VK P S +
Sbjct: 130 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----PI 181
Query: 715 GYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSL---- 770
+ APE S+ S+ D+++ V E + E +K+ P + M ++
Sbjct: 182 FWYAPESLTESKFSVASDVWS----FGVVLYELFTYIEKSKSP-PAEFMRMIGNDKQGQM 236
Query: 771 ----LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRE 826
L+E++ NN + + + C + I C + +R RD+ ++ R+
Sbjct: 237 IVFHLIELLKNNGRLP-----RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291
Query: 827 TFLG 830
G
Sbjct: 292 NMAG 295
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 131/304 (43%), Gaps = 38/304 (12%)
Query: 539 IGQGSFGYV----YKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKII 594
+G+G+FG V Y +VAVK + + R F E E L++++H N++K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
+C S G + EY+ GSL+D+L + ++++ KL + + MEY
Sbjct: 78 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 129
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L +H DL N+L++++ + DFGL K L + VK P S +
Sbjct: 130 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----PI 181
Query: 715 GYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSL---- 770
+ APE S+ S+ D+++ V E + E +K+ P + M ++
Sbjct: 182 FWYAPESLTESKFSVASDVWS----FGVVLYELFTYIEKSKSP-PAEFMRMIGNDKQGQM 236
Query: 771 ----LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRE 826
L+E++ NN + + + C + I C + +R RD+ ++ R+
Sbjct: 237 IVFHLIELLKNNGRLP-----RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291
Query: 827 TFLG 830
G
Sbjct: 292 NMAG 295
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 131/304 (43%), Gaps = 38/304 (12%)
Query: 539 IGQGSFGYV----YKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKII 594
+G+G+FG V Y +VAVK + + R F E E L++++H N++K
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
+C S G + EY+ GSL+D+L + ++++ KL + + MEY
Sbjct: 83 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 134
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L +H DL N+L++++ + DFGL K L + VK P S +
Sbjct: 135 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----PI 186
Query: 715 GYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSL---- 770
+ APE S+ S+ D+++ V E + E +K+ P + M ++
Sbjct: 187 FWYAPESLTESKFSVASDVWS----FGVVLYELFTYIEKSKSP-PAEFMRMIGNDKQGQM 241
Query: 771 ----LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRE 826
L+E++ NN + + + C + I C + +R RD+ ++ R+
Sbjct: 242 IVFHLIELLKNNGRLP-----RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 296
Query: 827 TFLG 830
G
Sbjct: 297 NMAG 300
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 131/304 (43%), Gaps = 38/304 (12%)
Query: 539 IGQGSFGYV----YKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKII 594
+G+G+FG V Y +VAVK + + R F E E L++++H N++K
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
+C S G + EY+ GSL+D+L + ++++ KL + + MEY
Sbjct: 84 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 135
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L +H DL N+L++++ + DFGL K L + VK P S +
Sbjct: 136 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----PI 187
Query: 715 GYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSL---- 770
+ APE S+ S+ D+++ V E + E +K+ P + M ++
Sbjct: 188 FWYAPESLTESKFSVASDVWS----FGVVLYELFTYIEKSKSP-PAEFMRMIGNDKQGQM 242
Query: 771 ----LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRE 826
L+E++ NN + + + C + I C + +R RD+ ++ R+
Sbjct: 243 IVFHLIELLKNNGRLP-----RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 297
Query: 827 TFLG 830
G
Sbjct: 298 NMAG 301
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 131/304 (43%), Gaps = 38/304 (12%)
Query: 539 IGQGSFGYV----YKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKII 594
+G+G+FG V Y +VAVK + + R F E E L++++H N++K
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
+C S G + EY+ GSL+D+L + ++++ KL + + MEY
Sbjct: 82 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 133
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L +H DL N+L++++ + DFGL K L + VK P S +
Sbjct: 134 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----PI 185
Query: 715 GYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSL---- 770
+ APE S+ S+ D+++ V E + E +K+ P + M ++
Sbjct: 186 FWYAPESLTESKFSVASDVWS----FGVVLYELFTYIEKSKSP-PAEFMRMIGNDKQGQM 240
Query: 771 ----LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRE 826
L+E++ NN + + + C + I C + +R RD+ ++ R+
Sbjct: 241 IVFHLIELLKNNGRLP-----RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 295
Query: 827 TFLG 830
G
Sbjct: 296 NMAG 299
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 92/198 (46%), Gaps = 23/198 (11%)
Query: 523 YAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEAL 582
Y E+ + E S IG GSFG VYKG D + +KV++ + ++F E L
Sbjct: 30 YWEIEAS--EVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPE-QFQAFRNEVAVL 86
Query: 583 RNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRV 642
R RH N++ + + + A V ++ E SL LH V+ K + Q +
Sbjct: 87 RKTRHVNILLFMGYMTKDNL------AIVTQWCEGSSLYKHLH-----VQETKFQMFQLI 135
Query: 643 NIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVK 702
+IA A M+YLH ++H D+K +N+ L + + DFGLA S V+
Sbjct: 136 DIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVE 192
Query: 703 TPSSSIGLKGTVGYVAPE 720
P+ G+V ++APE
Sbjct: 193 QPT------GSVLWMAPE 204
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 131/304 (43%), Gaps = 38/304 (12%)
Query: 539 IGQGSFGYV----YKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKII 594
+G+G+FG V Y +VAVK + + R F E E L++++H N++K
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
+C S G + EY+ GSL+D+L + ++++ KL + + MEY
Sbjct: 76 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 127
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L +H DL N+L++++ + DFGL K L + VK P S +
Sbjct: 128 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----PI 179
Query: 715 GYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSL---- 770
+ APE S+ S+ D+++ V E + E +K+ P + M ++
Sbjct: 180 FWYAPESLTESKFSVASDVWS----FGVVLYELFTYIEKSKSP-PAEFMRMIGNDKQGQM 234
Query: 771 ----LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRE 826
L+E++ NN + + + C + I C + +R RD+ ++ R+
Sbjct: 235 IVFHLIELLKNNGRLP-----RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 289
Query: 827 TFLG 830
G
Sbjct: 290 QMAG 293
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 131/304 (43%), Gaps = 38/304 (12%)
Query: 539 IGQGSFGYV----YKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKII 594
+G+G+FG V Y +VAVK + + R F E E L++++H N++K
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
+C S G + EY+ GSL+D+L + ++++ KL + + MEY
Sbjct: 109 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 160
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L +H DL N+L++++ + DFGL K L + VK P S +
Sbjct: 161 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----PI 212
Query: 715 GYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSL---- 770
+ APE S+ S+ D+++ V E + E +K+ P + M ++
Sbjct: 213 FWYAPESLTESKFSVASDVWS----FGVVLYELFTYIEKSKSP-PAEFMRMIGNDKQGQM 267
Query: 771 ----LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRE 826
L+E++ NN + + + C + I C + +R RD+ ++ R+
Sbjct: 268 IVFHLIELLKNNGRLP-----RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322
Query: 827 TFLG 830
G
Sbjct: 323 QMAG 326
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 131/304 (43%), Gaps = 38/304 (12%)
Query: 539 IGQGSFGYV----YKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKII 594
+G+G+FG V Y +VAVK + + R F E E L++++H N++K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
+C S G + EY+ GSL+D+L + ++++ KL + + MEY
Sbjct: 81 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 132
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L +H DL N+L++++ + DFGL K L + VK P S +
Sbjct: 133 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----PI 184
Query: 715 GYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSL---- 770
+ APE S+ S+ D+++ V E + E +K+ P + M ++
Sbjct: 185 FWYAPESLTESKFSVASDVWS----FGVVLYELFTYIEKSKSP-PAEFMRMIGNDKQGQM 239
Query: 771 ----LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRE 826
L+E++ NN + + + C + I C + +R RD+ ++ R+
Sbjct: 240 IVFHLIELLKNNGRLP-----RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 294
Query: 827 TFLG 830
G
Sbjct: 295 NMAG 298
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 100/214 (46%), Gaps = 22/214 (10%)
Query: 506 QKFVDTSPMEKQFPMVSYAELSKA--TGEFSSSNMIGQGSFGYVYKGTL---GEDEMIVA 560
+ FVD E P + E +K S ++G G FG V G L + E+ VA
Sbjct: 20 RTFVDPHTFED--PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVA 77
Query: 561 VKVINLKY-KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGS 619
+K + + Y + R F+ E + H N+I++ + + + V EYMENGS
Sbjct: 78 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV-----MIVTEYMENGS 132
Query: 620 LKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM 679
L +L + D Q ++IQ V + +AS M+YL VH DL N+L++ ++
Sbjct: 133 LDSFLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG---FVHRDLAARNILINSNL 184
Query: 680 VAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGT 713
V V DFGL++ L D + A T I ++ T
Sbjct: 185 VCKVSDFGLSRVLEDDP-EAAYTTRGGKIPIRWT 217
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 506 QKFVDTSPMEKQFPMVSYAELSKA--TGEFSSSNMIGQGSFGYVYKGTL---GEDEMIVA 560
+ FVD P + P + E +K S ++G G FG V G L + E+ VA
Sbjct: 20 RTFVD--PHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVA 77
Query: 561 VKVINLKY-KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGS 619
+K + + Y + R F+ E + H N+I++ + + + V EYMENGS
Sbjct: 78 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV-----MIVTEYMENGS 132
Query: 620 LKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM 679
L +L + D Q ++IQ V + +AS M+YL VH DL N+L++ ++
Sbjct: 133 LDSFLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNL 184
Query: 680 VAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGT 713
V V DFGL++ L D + A T I ++ T
Sbjct: 185 VCKVSDFGLSRVLEDDP-EAAYTTRGGKIPIRWT 217
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 100/222 (45%), Gaps = 24/222 (10%)
Query: 532 EFSSSNMIGQGSFGYVYKG-TLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNL 590
E + IG G FG V+ G L +D+ VA+K I + + F+ E E + + H L
Sbjct: 28 ELTFVQEIGSGQFGLVHLGYWLNKDK--VAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKL 84
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVAS 650
+++ +C VFE+ME+G L D+L L + + +DV
Sbjct: 85 VQLYGVCLEQAPI-----CLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDVCE 134
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
M YL C ++H DL N L+ + V V DFG+ +F+ D Q +SS G
Sbjct: 135 GMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-------TSSTGT 184
Query: 711 KGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHE 752
K V + +PE S S D+++ + VF+EG +E
Sbjct: 185 KFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 226
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 24/219 (10%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFV-AECEALRNIRHRNL 590
+F +G+G FG V++ D+ A+K I L + +R V E +AL + H +
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 591 IKIITIC----SSTDFKGTDFKAFVFEYME---NGSLKDWLHQSDDQVEVCKLSLIQR-- 641
++ ++ + + K +++ M+ +LKDW++ C + +R
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGR------CTIEERERSV 119
Query: 642 -VNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTA 700
++I + +A A+E+LH ++H DLKPSN+ D V V DFGL + + +
Sbjct: 120 CLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 176
Query: 701 VKTP----SSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
V TP + G GT Y++PE G+ S DIF+
Sbjct: 177 VLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFS 215
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 100/214 (46%), Gaps = 22/214 (10%)
Query: 506 QKFVDTSPMEKQFPMVSYAELSKA--TGEFSSSNMIGQGSFGYVYKGTL---GEDEMIVA 560
+ FVD E P + E +K S ++G G FG V G L + E+ VA
Sbjct: 20 RTFVDPHTFED--PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVA 77
Query: 561 VKVINLKY-KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGS 619
+K + + Y + R F+ E + H N+I++ + + + V EYMENGS
Sbjct: 78 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV-----MIVTEYMENGS 132
Query: 620 LKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM 679
L +L + D Q ++IQ V + +AS M+YL VH DL N+L++ ++
Sbjct: 133 LDSFLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNL 184
Query: 680 VAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGT 713
V V DFGL++ L D + A T I ++ T
Sbjct: 185 VCKVSDFGLSRVLEDDP-EAAYTTRGGKIPIRWT 217
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 96/197 (48%), Gaps = 22/197 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+G G FG V+ GT + VA+K + + SF+ E + ++ ++H L+++ + S
Sbjct: 17 LGNGQFGEVWMGTWNGNTK-VAIKTLKPG-TMSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
V EYM GSL D+L + + L L V++A VA+ M Y+
Sbjct: 75 EEPI------YIVTEYMNKGSLLDFLKDGEGRA----LKLPNLVDMAAQVAAGMAYIERM 124
Query: 659 CQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVA 718
+H DL+ +N+L+ + ++ + DFGLA+ + D++ ++ G K + + A
Sbjct: 125 N---YIHRDLRSANILVGNGLICKIADFGLARLIEDNEX-------TARQGAKFPIKWTA 174
Query: 719 PEYGMGSEASMTGDIFT 735
PE + ++ D+++
Sbjct: 175 PEAALYGRFTIKSDVWS 191
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 99/214 (46%), Gaps = 22/214 (10%)
Query: 506 QKFVDTSPMEKQFPMVSYAELSKA--TGEFSSSNMIGQGSFGYVYKGTL---GEDEMIVA 560
+ FVD E P + E +K S ++G G FG V G L + E+ VA
Sbjct: 20 RTFVDPHTFED--PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVA 77
Query: 561 VKVINLKY-KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGS 619
+K + + Y + R F+ E + H N+I++ + + + V EYMENGS
Sbjct: 78 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV-----MIVTEYMENGS 132
Query: 620 LKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM 679
L +L + D Q ++IQ V + +AS M+YL VH DL N+L++ ++
Sbjct: 133 LDSFLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNL 184
Query: 680 VAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGT 713
V V DFGL + L D + A T I ++ T
Sbjct: 185 VCKVSDFGLGRVLEDDP-EAAYTTRGGKIPIRWT 217
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 110/221 (49%), Gaps = 29/221 (13%)
Query: 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMI---VAVKVINLKYKGASRSFVA----ECEALR 583
G + + +G G+FG V +GE ++ VAVK++N + K S V E + L+
Sbjct: 11 GHYVLGDTLGVGTFGKV---KIGEHQLTGHKVAVKILN-RQKIRSLDVVGKIKREIQNLK 66
Query: 584 NIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVN 643
RH ++IK+ + S+ TDF V EY+ G L D++ + E+ L Q++
Sbjct: 67 LFRHPHIIKLYQVISTP----TDF-FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQI- 120
Query: 644 IAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQ-LDTAVK 702
SA++Y H H +VH DLKP NVLLD M A + DFGL+ +SD + L T+
Sbjct: 121 -----LSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCG 172
Query: 703 TPSSSIG--LKGTVGYVAPEYGMGSEASMTGDIFTGRRPID 741
+P+ + + G + Y PE + S + + G P D
Sbjct: 173 SPNYAAPEVISGRL-YAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 539 IGQGSFGYV----YKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKII 594
+G+G+FG V Y +VAVK + + R F E E L++++H N++K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
+C S G + EY+ GSL+D+L + ++++ KL + + MEY
Sbjct: 96 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 147
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L +H DL N+L++++ + DFGL K L + VK P S +
Sbjct: 148 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----PI 199
Query: 715 GYVAPEYGMGSEASMTGDIFT 735
+ APE S+ S+ D+++
Sbjct: 200 FWYAPESLTESKFSVASDVWS 220
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 131/304 (43%), Gaps = 38/304 (12%)
Query: 539 IGQGSFGYV----YKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKII 594
+G+G+FG V Y +VAVK + + R F E E L++++H N++K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
+C S G + EY+ GSL+D+L + ++++ KL + + MEY
Sbjct: 78 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 129
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L +H DL N+L++++ + DFGL K L + VK P S +
Sbjct: 130 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGES-----PI 181
Query: 715 GYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSL---- 770
+ APE S+ S+ D+++ V E + E +K+ P + M ++
Sbjct: 182 FWYAPESLTESKFSVASDVWS----FGVVLYELFTYIEKSKSP-PAEFMRMIGNDKQGQM 236
Query: 771 ----LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRE 826
L+E++ NN + + + C + I C + +R RD+ ++ R+
Sbjct: 237 IVFHLIELLKNNGRLP-----RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291
Query: 827 TFLG 830
G
Sbjct: 292 NMAG 295
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 539 IGQGSFGYV----YKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKII 594
+G+G+FG V Y +VAVK + + R F E E L++++H N++K
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
+C S G + EY+ GSL+D+L + ++++ KL + + MEY
Sbjct: 77 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 128
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L +H DL N+L++++ + DFGL K L + VK P S +
Sbjct: 129 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----PI 180
Query: 715 GYVAPEYGMGSEASMTGDIFT 735
+ APE S+ S+ D+++
Sbjct: 181 FWYAPESLTESKFSVASDVWS 201
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 90/185 (48%), Gaps = 18/185 (9%)
Query: 533 FSSSNMIGQGSFGYVYKGTL---GEDEMIVAVKVINLKY-KGASRSFVAECEALRNIRHR 588
S ++G G FG V G L + E+ VA+K + + Y + R F+ E + H
Sbjct: 35 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 94
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N+I++ + + + V EYMENGSL +L + D Q ++IQ V + +
Sbjct: 95 NIIRLEGVVTKSKPV-----MIVTEYMENGSLDSFLRKHDAQ-----FTVIQLVGMLRGI 144
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
AS M+YL VH DL N+L++ ++V V DFGL++ L D + A T I
Sbjct: 145 ASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP-EAAYTTRGGKI 200
Query: 709 GLKGT 713
++ T
Sbjct: 201 PIRWT 205
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 506 QKFVDTSPMEKQFPMVSYAELSKA--TGEFSSSNMIGQGSFGYVYKGTL---GEDEMIVA 560
+ +VD P + P + E +K S ++G G FG V G L + E+ VA
Sbjct: 20 RTYVD--PHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVA 77
Query: 561 VKVINLKY-KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGS 619
+K + + Y + R F+ E + H N+I++ + + + V EYMENGS
Sbjct: 78 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV-----MIVTEYMENGS 132
Query: 620 LKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM 679
L +L + D Q ++IQ V + +AS M+YL VH DL N+L++ ++
Sbjct: 133 LDSFLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNL 184
Query: 680 VAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGT 713
V V DFGL++ L D + A T I ++ T
Sbjct: 185 VCKVSDFGLSRVLEDDP-EAAYTTRGGKIPIRWT 217
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 506 QKFVDTSPMEKQFPMVSYAELSKA--TGEFSSSNMIGQGSFGYVYKGTL---GEDEMIVA 560
+ +VD P + P + E +K S ++G G FG V G L + E+ VA
Sbjct: 18 RTYVD--PHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVA 75
Query: 561 VKVINLKY-KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGS 619
+K + + Y + R F+ E + H N+I++ + + + V EYMENGS
Sbjct: 76 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV-----MIVTEYMENGS 130
Query: 620 LKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM 679
L +L + D Q ++IQ V + +AS M+YL VH DL N+L++ ++
Sbjct: 131 LDSFLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNL 182
Query: 680 VAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGT 713
V V DFGL++ L D + A T I ++ T
Sbjct: 183 VCKVSDFGLSRVLEDDP-EAAYTTRGGKIPIRWT 215
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 103/231 (44%), Gaps = 34/231 (14%)
Query: 517 QFPMVSYAELSKATGEFSSS------NMIGQGSFGYVYKGTLGEDEMIVAVK----VINL 566
+F S+ EL T F N G+G FG VYKG + + VAVK ++++
Sbjct: 2 RFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV--NNTTVAVKKLAAMVDI 59
Query: 567 KYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQ 626
+ + F E + +H NL++++ S G D V+ Y NGSL D L
Sbjct: 60 TTEELKQQFDQEIKVXAKCQHENLVELLGFSSD----GDDL-CLVYVYXPNGSLLDRLSC 114
Query: 627 SDDQVEVCKLSLIQRVNIAIDVASAMEYLH--HHCQPPMVHGDLKPSNVLLDHDMVAHVC 684
D LS R IA A+ + +LH HH +H D+K +N+LLD A +
Sbjct: 115 LDG---TPPLSWHXRCKIAQGAANGINFLHENHH-----IHRDIKSANILLDEAFTAKIS 166
Query: 685 DFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
DFGLA+ + + V + GT Y APE + E + DI++
Sbjct: 167 DFGLAR--ASEKFAQXVXXSR----IVGTTAYXAPE-ALRGEITPKSDIYS 210
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 18/184 (9%)
Query: 534 SSSNMIGQGSFGYVYKGTL---GEDEMIVAVKVINLKY-KGASRSFVAECEALRNIRHRN 589
S ++G G FG V G L + E+ VA+K + + Y + R F+ E + H N
Sbjct: 19 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 78
Query: 590 LIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+I++ + + + V EYMENGSL +L + D Q ++IQ V + +A
Sbjct: 79 IIRLEGVVTKSKPV-----MIVTEYMENGSLDSFLRKHDAQ-----FTVIQLVGMLRGIA 128
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
S M+YL VH DL N+L++ ++V V DFGL++ L D + A T I
Sbjct: 129 SGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP-EAAYTTRGGKIP 184
Query: 710 LKGT 713
++ T
Sbjct: 185 IRWT 188
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 100/214 (46%), Gaps = 22/214 (10%)
Query: 506 QKFVDTSPMEKQFPMVSYAELSKA--TGEFSSSNMIGQGSFGYVYKGTL---GEDEMIVA 560
+ +VD E P + E +K S ++G G FG V G L + E+ VA
Sbjct: 20 RTYVDPHTFED--PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVA 77
Query: 561 VKVINLKY-KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGS 619
+K + + Y + R F+ E + H N+I++ + + + V EYMENGS
Sbjct: 78 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV-----MIVTEYMENGS 132
Query: 620 LKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM 679
L +L + D Q ++IQ V + +AS M+YL VH DL N+L++ ++
Sbjct: 133 LDSFLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNL 184
Query: 680 VAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGT 713
V V DFGL++ L D + A T I ++ T
Sbjct: 185 VCKVSDFGLSRVLEDDP-EAAYTTRGGKIPIRWT 217
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 28/207 (13%)
Query: 536 SNMIGQGSFGYVYKGTL---GEDEMIVAVKVINLKYKGASR-SFVAECEALRNIRHRNLI 591
+IG G FG V G L G+ E+ VA+K + Y R F++E + H N+I
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 592 K---IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
++T C + EYMENGSL +L ++D + ++IQ V + +
Sbjct: 94 HLEGVVTKCKPV--------MIITEYMENGSLDAFLRKNDG-----RFTVIQLVGMLRGI 140
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
S M+YL VH DL N+L++ ++V V DFG+++ L D + A T I
Sbjct: 141 GSGMKYLSDMSA---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDP-EAAYTTRGGKI 196
Query: 709 GLKGTVGYVAPEYGMGSEASMTGDIFT 735
++ T APE + + D+++
Sbjct: 197 PIRWT----APEAIAYRKFTSASDVWS 219
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 75.5 bits (184), Expect = 1e-13, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 103/203 (50%), Gaps = 20/203 (9%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLI 591
+ + + +G G +G VY+G + + VAVK + + F+ E ++ I+H NL+
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLV 70
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
+++ +C+ + F + E+M G+L D+L + + Q ++S + + +A ++SA
Sbjct: 71 QLLGVCT----REPPF-YIIIEFMTYGNLLDYLRECNRQ----EVSAVVLLYMATQISSA 121
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
MEYL + +H DL N L+ + + V DFGL++ ++ T ++ G K
Sbjct: 122 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-------DTXTAHAGAK 171
Query: 712 GTVGYVAPEYGMGSEASMTGDIF 734
+ + APE ++ S+ D++
Sbjct: 172 FPIKWTAPESLAYNKFSIKSDVW 194
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 130/304 (42%), Gaps = 38/304 (12%)
Query: 539 IGQGSFGYV----YKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKII 594
+G+G+FG V Y +VAVK + + R F E E L++++H N++K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
+C S G + EY+ GSL+D+L ++++ KL + + MEY
Sbjct: 81 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKL-----LQYTSQICKGMEY 132
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L +H DL N+L++++ + DFGL K L + VK P S +
Sbjct: 133 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----PI 184
Query: 715 GYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSL---- 770
+ APE S+ S+ D+++ V E + E +K+ P + M ++
Sbjct: 185 FWYAPESLTESKFSVASDVWS----FGVVLYELFTYIEKSKSP-PAEFMRMIGNDKQGQM 239
Query: 771 ----LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRE 826
L+E++ NN + + + C + I C + +R RD+ ++ R+
Sbjct: 240 IVFHLIELLKNNGRLP-----RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 294
Query: 827 TFLG 830
G
Sbjct: 295 NMAG 298
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 101/224 (45%), Gaps = 28/224 (12%)
Query: 532 EFSSSNMIGQGSFGYVYKG-TLGEDEMIVAVKVINLKYKGA--SRSFVAECEALRNIRHR 588
E + IG G FG V+ G L +D+ VA+K I +GA F+ E E + + H
Sbjct: 8 ELTFVQEIGSGQFGLVHLGYWLNKDK--VAIKTIR---EGAMSEEDFIEEAEVMMKLSHP 62
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
L+++ +C VFE+ME+G L D+L L + + +DV
Sbjct: 63 KLVQLYGVCLEQAPI-----CLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDV 112
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
M YL + ++H DL N L+ + V V DFG+ +F+ D Q +SS
Sbjct: 113 CEGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-------TSST 162
Query: 709 GLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHE 752
G K V + +PE S S D+++ + VF+EG +E
Sbjct: 163 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 206
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 519 PMVSYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAE 578
P +Y + + + + +G G +G VY+G + + VAVK + + F+ E
Sbjct: 2 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKE 60
Query: 579 CEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSL 638
++ I+H NL++++ +C+ + F + E+M G+L D+L + + Q EV + L
Sbjct: 61 AAVMKEIKHPNLVQLLGVCT----REPPF-YIIIEFMTYGNLLDYLRECNRQ-EVNAVVL 114
Query: 639 IQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLD 698
+ +A ++SAMEYL + +H DL N L+ + + V DFGL++ ++
Sbjct: 115 LY---MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG---- 164
Query: 699 TAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
T ++ G K + + APE ++ S+ D++
Sbjct: 165 ---DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 198
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 28/206 (13%)
Query: 537 NMIGQGSFGYVYKGTL---GEDEMIVAVKVINLKYKGASR-SFVAECEALRNIRHRNLIK 592
+IG G FG V G L G+ E+ VA+K + Y R F++E + H N+I
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 593 ---IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
++T C + EYMENGSL +L ++D + ++IQ V + +
Sbjct: 80 LEGVVTKCKPV--------MIITEYMENGSLDAFLRKNDG-----RFTVIQLVGMLRGIG 126
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
S M+YL VH DL N+L++ ++V V DFG+++ L D + A T I
Sbjct: 127 SGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDP-EAAYTTRGGKIP 182
Query: 710 LKGTVGYVAPEYGMGSEASMTGDIFT 735
++ T APE + + D+++
Sbjct: 183 IRWT----APEAIAYRKFTSASDVWS 204
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 125/273 (45%), Gaps = 37/273 (13%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+G G FG VY+G + + VAVK + + F+ E ++ I+H NL++++ +C+
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
+ F + E+M G+L D+L + + Q ++S + + +A ++SAMEYL
Sbjct: 78 ----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVSAVVLLYMATQISSAMEYLE-- 126
Query: 659 CQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVA 718
+ +H DL N L+ + + V DFGL++ ++ T ++ G K + + A
Sbjct: 127 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-------DTXTAHAGAKFPIKWTA 178
Query: 719 PEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTNN 778
PE ++ S+ D++ G L E A + +DPS + E++ +
Sbjct: 179 PESLAYNKFSIKSDVWAF----------GVLLWEIATYGM--SPYPGIDPSQVYELLEKD 226
Query: 779 SMIQEDKRVKTEECLNAIIRTGVLCSMESPFER 811
++ + E C + C +P +R
Sbjct: 227 YRME-----RPEGCPEKVYELMRACWQWNPSDR 254
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 28/206 (13%)
Query: 537 NMIGQGSFGYVYKGTL---GEDEMIVAVKVINLKYKGASR-SFVAECEALRNIRHRNLIK 592
+IG G FG V G L G+ E+ VA+K + Y R F++E + H N+I
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 593 ---IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
++T C + EYMENGSL +L ++D + ++IQ V + +
Sbjct: 74 LEGVVTKCKPV--------MIITEYMENGSLDAFLRKNDG-----RFTVIQLVGMLRGIG 120
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
S M+YL VH DL N+L++ ++V V DFG+++ L D + A T I
Sbjct: 121 SGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDP-EAAYTTRGGKIP 176
Query: 710 LKGTVGYVAPEYGMGSEASMTGDIFT 735
++ T APE + + D+++
Sbjct: 177 IRWT----APEAIAYRKFTSASDVWS 198
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 522 SYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEA 581
+Y + + + + +G G +G VY+G + + VAVK + + F+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 62
Query: 582 LRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQR 641
++ I+H NL++++ +C+ + F + E+M G+L D+L + + Q ++S +
Sbjct: 63 MKEIKHPNLVQLLGVCT----REPPF-YIIIEFMTYGNLLDYLRECNRQ----EVSAVVL 113
Query: 642 VNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV 701
+ +A ++SAMEYL + +H DL N L+ + + V DFGL++ ++
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG------- 163
Query: 702 KTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
T ++ G K + + APE ++ S+ D++
Sbjct: 164 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 522 SYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEA 581
+Y + + + + +G G +G VY+G + + VAVK + + F+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 62
Query: 582 LRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQR 641
++ I+H NL++++ +C+ + F + E+M G+L D+L + + Q ++S +
Sbjct: 63 MKEIKHPNLVQLLGVCT----REPPF-YIIIEFMTYGNLLDYLRECNRQ----EVSAVVL 113
Query: 642 VNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV 701
+ +A ++SAMEYL + +H DL N L+ + + V DFGL++ ++
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG------- 163
Query: 702 KTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
T ++ G K + + APE ++ S+ D++
Sbjct: 164 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 131/304 (43%), Gaps = 38/304 (12%)
Query: 539 IGQGSFGYV----YKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKII 594
+G+G+FG V Y +VAVK + + R F E E L++++H N++K
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
+C S G + EY+ GSL+D+L + ++++ KL + + MEY
Sbjct: 79 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEY 130
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L +H +L N+L++++ + DFGL K L + VK P S +
Sbjct: 131 L---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGES-----PI 182
Query: 715 GYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSL---- 770
+ APE S+ S+ D+++ V E + E +K+ P + M ++
Sbjct: 183 FWYAPESLTESKFSVASDVWS----FGVVLYELFTYIEKSKSP-PAEFMRMIGNDKQGQM 237
Query: 771 ----LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRE 826
L+E++ NN + + + C + I C + +R RD+ ++ R+
Sbjct: 238 IVFHLIELLKNNGRLP-----RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 292
Query: 827 TFLG 830
G
Sbjct: 293 NMAG 296
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 100/224 (44%), Gaps = 28/224 (12%)
Query: 532 EFSSSNMIGQGSFGYVYKG-TLGEDEMIVAVKVINLKYKGA--SRSFVAECEALRNIRHR 588
E + IG G FG V+ G L +D+ VA+K I +GA F+ E E + + H
Sbjct: 9 ELTFVQEIGSGQFGLVHLGYWLNKDK--VAIKTIR---EGAMSEEDFIEEAEVMMKLSHP 63
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
L+++ +C V E+ME+G L D+L L + + +DV
Sbjct: 64 KLVQLYGVCLEQAPI-----CLVTEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDV 113
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
M YL C ++H DL N L+ + V V DFG+ +F+ D Q +SS
Sbjct: 114 CEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-------TSST 163
Query: 709 GLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHE 752
G K V + +PE S S D+++ + VF+EG +E
Sbjct: 164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 74.3 bits (181), Expect = 2e-13, Method: Composition-based stats.
Identities = 55/216 (25%), Positives = 107/216 (49%), Gaps = 20/216 (9%)
Query: 519 PMVSYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAE 578
P +Y + + + + +G G +G VY+G + + VAVK + + F+ E
Sbjct: 5 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKE 63
Query: 579 CEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSL 638
++ I+H NL++++ +C+ + F + E+M G+L D+L + + Q EV + L
Sbjct: 64 AAVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ-EVNAVVL 117
Query: 639 IQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLD 698
+ +A ++SAMEYL + +H DL N L+ + + V DFGL++ ++
Sbjct: 118 LY---MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG---- 167
Query: 699 TAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIF 734
T ++ G K + + APE ++ S+ D++
Sbjct: 168 ---DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 200
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 90/188 (47%), Gaps = 22/188 (11%)
Query: 537 NMIGQGSFGYVYKGTL---GEDEMIVAVKVINLKY-KGASRSFVAECEALRNIRHRNLIK 592
+IG G G V G L G+ ++ VA+K + Y + R F++E + H N+I+
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAM 652
+ + + +G V EYMENGSL +L D Q +++Q V + V + M
Sbjct: 115 LEGVVT----RGR-LAMIVTEYMENGSLDTFLRTHDGQ-----FTIMQLVGMLRGVGAGM 164
Query: 653 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKG 712
YL VH DL NVL+D ++V V DFGL++ L D D A T I ++
Sbjct: 165 RYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP-DAAXTTTGGKIPIR- 219
Query: 713 TVGYVAPE 720
+ APE
Sbjct: 220 ---WTAPE 224
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 90/188 (47%), Gaps = 22/188 (11%)
Query: 537 NMIGQGSFGYVYKGTL---GEDEMIVAVKVINLKY-KGASRSFVAECEALRNIRHRNLIK 592
+IG G G V G L G+ ++ VA+K + Y + R F++E + H N+I+
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAM 652
+ + + +G V EYMENGSL +L D Q +++Q V + V + M
Sbjct: 115 LEGVVT----RGR-LAMIVTEYMENGSLDTFLRTHDGQ-----FTIMQLVGMLRGVGAGM 164
Query: 653 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKG 712
YL VH DL NVL+D ++V V DFGL++ L D D A T I ++
Sbjct: 165 RYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP-DAAYTTTGGKIPIR- 219
Query: 713 TVGYVAPE 720
+ APE
Sbjct: 220 ---WTAPE 224
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 109/221 (49%), Gaps = 29/221 (13%)
Query: 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMI---VAVKVINLKYKGASRSFVA----ECEALR 583
G + + +G G+FG V +GE ++ VAVK++N + K S V E + L+
Sbjct: 11 GHYVLGDTLGVGTFGKV---KIGEHQLTGHKVAVKILN-RQKIRSLDVVGKIKREIQNLK 66
Query: 584 NIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVN 643
RH ++IK+ + S+ TDF V EY+ G L D++ + E+ L Q++
Sbjct: 67 LFRHPHIIKLYQVISTP----TDF-FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQI- 120
Query: 644 IAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQ-LDTAVK 702
SA++Y H H +VH DLKP NVLLD M A + DFGL+ +SD + L +
Sbjct: 121 -----LSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCG 172
Query: 703 TPSSSIG--LKGTVGYVAPEYGMGSEASMTGDIFTGRRPID 741
+P+ + + G + Y PE + S + + G P D
Sbjct: 173 SPNYAAPEVISGRL-YAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 73.9 bits (180), Expect = 3e-13, Method: Composition-based stats.
Identities = 56/223 (25%), Positives = 110/223 (49%), Gaps = 22/223 (9%)
Query: 512 SPMEKQFPMVSYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGA 571
+ M+ P E+ + + + + +G G +G VY+G + + VAVK + +
Sbjct: 1 TSMDPSSPNYDKWEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTME 57
Query: 572 SRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQV 631
F+ E ++ I+H NL++++ +C+ + F + E+M G+L D+L + + Q
Sbjct: 58 VEEFLKEAAVMKEIKHPNLVQLLGVCT----REPPF-YIIIEFMTYGNLLDYLRECNRQ- 111
Query: 632 EVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKF 691
EV + L+ +A ++SAMEYL + +H DL N L+ + + V DFGL++
Sbjct: 112 EVNAVVLLY---MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 165
Query: 692 LSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIF 734
++ T ++ G K + + APE ++ S+ D++
Sbjct: 166 MTG-------DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 100/220 (45%), Gaps = 28/220 (12%)
Query: 531 GEFSSSNMIGQGSFGYV---YKGTLGEDEMIVAVKVINLKYKGASR---SFVAECEALRN 584
G + +G+GSFG V Y T G+ VA+K+IN K S E LR
Sbjct: 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQK---VALKIINKKVLAKSDMQGRIEREISYLRL 69
Query: 585 IRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNI 644
+RH ++IK+ + K D V EY N L D++ Q D E Q++
Sbjct: 70 LRHPHIIKLYDV-----IKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQI-- 121
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQ-LDTAVKT 703
SA+EY H H +VH DLKP N+LLD + + DFGL+ ++D L T+ +
Sbjct: 122 ----ISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGS 174
Query: 704 PSSSIG--LKGTVGYVAPEYGMGSEASMTGDIFTGRRPID 741
P+ + + G + Y PE + S + + R P D
Sbjct: 175 PNYAAPEVISGKL-YAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 100/220 (45%), Gaps = 28/220 (12%)
Query: 531 GEFSSSNMIGQGSFGYV---YKGTLGEDEMIVAVKVINLKYKGASR---SFVAECEALRN 584
G + +G+GSFG V Y T G+ VA+K+IN K S E LR
Sbjct: 14 GNYQIVKTLGEGSFGKVKLAYHTTTGQK---VALKIINKKVLAKSDMQGRIEREISYLRL 70
Query: 585 IRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNI 644
+RH ++IK+ + K D V EY N L D++ Q D E Q++
Sbjct: 71 LRHPHIIKLYDV-----IKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQI-- 122
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQ-LDTAVKT 703
SA+EY H H +VH DLKP N+LLD + + DFGL+ ++D L T+ +
Sbjct: 123 ----ISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGS 175
Query: 704 PSSSIG--LKGTVGYVAPEYGMGSEASMTGDIFTGRRPID 741
P+ + + G + Y PE + S + + R P D
Sbjct: 176 PNYAAPEVISGKL-YAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 522 SYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEA 581
+Y + + + + +G G +G VY+G + + VAVK + + F+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 62
Query: 582 LRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQR 641
++ I+H NL++++ +C+ + F + E+M G+L D+L + + Q ++S +
Sbjct: 63 MKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVSAVVL 113
Query: 642 VNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV 701
+ +A ++SAMEYL + +H DL N L+ + + V DFGL++ ++
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG------- 163
Query: 702 KTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
T ++ G K + + APE ++ S+ D++
Sbjct: 164 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 522 SYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEA 581
+Y + + + + +G G +G VY+G + + VAVK + + F+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 62
Query: 582 LRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQR 641
++ I+H NL++++ +C+ + F + E+M G+L D+L + + Q ++S +
Sbjct: 63 MKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVSAVVL 113
Query: 642 VNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV 701
+ +A ++SAMEYL + +H DL N L+ + + V DFGL++ ++
Sbjct: 114 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG------- 163
Query: 702 KTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
T ++ G K + + APE ++ S+ D++
Sbjct: 164 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 197
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 131/304 (43%), Gaps = 38/304 (12%)
Query: 539 IGQGSFGYV----YKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKII 594
+G+G+FG V Y +VAVK + + R F E E L++++H N++K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
+C S G + E++ GSL+++L + ++++ KL + + MEY
Sbjct: 81 GVCYSA---GRRNLKLIMEFLPYGSLREYLQKHKERIDHIKL-----LQYTSQICKGMEY 132
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L +H DL N+L++++ + DFGL K L + VK P S +
Sbjct: 133 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----PI 184
Query: 715 GYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSL---- 770
+ APE S+ S+ D+++ V E + E +K+ P + M ++
Sbjct: 185 FWYAPESLTESKFSVASDVWS----FGVVLYELFTYIEKSKSP-PAEFMRMIGNDKQGQM 239
Query: 771 ----LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRE 826
L+E++ NN + + + C + I C + +R RD+ ++ R+
Sbjct: 240 IVFHLIELLKNNGRLP-----RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 294
Query: 827 TFLG 830
G
Sbjct: 295 NMAG 298
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 522 SYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEA 581
+Y + + + + +G G +G VY+G + + VAVK + + F+ E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 67
Query: 582 LRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQR 641
++ I+H NL++++ +C+ + F + E+M G+L D+L + + Q ++S +
Sbjct: 68 MKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVSAVVL 118
Query: 642 VNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV 701
+ +A ++SAMEYL + +H DL N L+ + + V DFGL++ ++
Sbjct: 119 LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG------- 168
Query: 702 KTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
T ++ G K + + APE ++ S+ D++
Sbjct: 169 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 100/220 (45%), Gaps = 28/220 (12%)
Query: 531 GEFSSSNMIGQGSFGYV---YKGTLGEDEMIVAVKVINLKYKGASR---SFVAECEALRN 584
G + +G+GSFG V Y T G+ VA+K+IN K S E LR
Sbjct: 4 GNYQIVKTLGEGSFGKVKLAYHTTTGQK---VALKIINKKVLAKSDMQGRIEREISYLRL 60
Query: 585 IRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNI 644
+RH ++IK+ + K D V EY N L D++ Q D E Q++
Sbjct: 61 LRHPHIIKLYDV-----IKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQI-- 112
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQ-LDTAVKT 703
SA+EY H H +VH DLKP N+LLD + + DFGL+ ++D L T+ +
Sbjct: 113 ----ISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGS 165
Query: 704 PSSSIG--LKGTVGYVAPEYGMGSEASMTGDIFTGRRPID 741
P+ + + G + Y PE + S + + R P D
Sbjct: 166 PNYAAPEVISGKL-YAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 100/220 (45%), Gaps = 28/220 (12%)
Query: 531 GEFSSSNMIGQGSFGYV---YKGTLGEDEMIVAVKVINLKYKGASR---SFVAECEALRN 584
G + +G+GSFG V Y T G+ VA+K+IN K S E LR
Sbjct: 8 GNYQIVKTLGEGSFGKVKLAYHTTTGQK---VALKIINKKVLAKSDMQGRIEREISYLRL 64
Query: 585 IRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNI 644
+RH ++IK+ + K D V EY N L D++ Q D E Q++
Sbjct: 65 LRHPHIIKLYDV-----IKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQI-- 116
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQ-LDTAVKT 703
SA+EY H H +VH DLKP N+LLD + + DFGL+ ++D L T+ +
Sbjct: 117 ----ISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGS 169
Query: 704 PSSSIG--LKGTVGYVAPEYGMGSEASMTGDIFTGRRPID 741
P+ + + G + Y PE + S + + R P D
Sbjct: 170 PNYAAPEVISGKL-YAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 95/197 (48%), Gaps = 26/197 (13%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
IG+G FG V G ++ VAVK I K +++F+AE + +RH NL++++ +
Sbjct: 20 IGKGEFGDVMLGDYRGNK--VAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVI- 74
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
+ KG + V EYM GSL D+L V L + ++DV AMEYL +
Sbjct: 75 -VEEKGGLY--IVTEYMAKGSLVDYLRSRGRSV----LGGDCLLKFSLDVCEAMEYLEGN 127
Query: 659 CQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVA 718
VH DL NVL+ D VA V DFGL K S Q DT K P V + A
Sbjct: 128 ---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-DTG-KLP---------VKWTA 173
Query: 719 PEYGMGSEASMTGDIFT 735
PE + S D+++
Sbjct: 174 PEALREAAFSTKSDVWS 190
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 99/214 (46%), Gaps = 22/214 (10%)
Query: 506 QKFVDTSPMEKQFPMVSYAELSKA--TGEFSSSNMIGQGSFGYVYKGTL---GEDEMIVA 560
+ FVD E P + E +K S ++G G FG V G L + E+ VA
Sbjct: 20 RTFVDPHTFED--PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVA 77
Query: 561 VKVINLKY-KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGS 619
+K + + Y + R F+ E + H N+I++ + + + V E MENGS
Sbjct: 78 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV-----MIVTEXMENGS 132
Query: 620 LKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM 679
L +L + D Q ++IQ V + +AS M+YL VH DL N+L++ ++
Sbjct: 133 LDSFLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG---AVHRDLAARNILINSNL 184
Query: 680 VAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGT 713
V V DFGL++ L D + A T I ++ T
Sbjct: 185 VCKVSDFGLSRVLEDDP-EAAYTTRGGKIPIRWT 217
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 95/197 (48%), Gaps = 26/197 (13%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
IG+G FG V G ++ VAVK I K +++F+AE + +RH NL++++ +
Sbjct: 14 IGKGEFGDVMLGDYRGNK--VAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVI- 68
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
+ KG + V EYM GSL D+L V L + ++DV AMEYL +
Sbjct: 69 -VEEKGGLY--IVTEYMAKGSLVDYLRSRGRSV----LGGDCLLKFSLDVCEAMEYLEGN 121
Query: 659 CQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVA 718
VH DL NVL+ D VA V DFGL K S Q DT K P V + A
Sbjct: 122 ---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-DTG-KLP---------VKWTA 167
Query: 719 PEYGMGSEASMTGDIFT 735
PE + S D+++
Sbjct: 168 PEALREKKFSTKSDVWS 184
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 522 SYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEA 581
+Y + + + + +G G +G VY+G + + VAVK + + F+ E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 67
Query: 582 LRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQR 641
++ I+H NL++++ +C+ + F + E+M G+L D+L + + Q EV + L+
Sbjct: 68 MKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ-EVNAVVLLY- 120
Query: 642 VNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV 701
+A ++SAMEYL + +H DL N L+ + + V DFGL++ ++
Sbjct: 121 --MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG------- 168
Query: 702 KTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
T ++ G K + + APE ++ S+ D++
Sbjct: 169 DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 36/223 (16%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLI 591
E ++G+G+FG V K + VA+K ++ + ++F+ E L + H N++
Sbjct: 10 EIEVEEVVGRGAFGVVCKAKWRAKD--VAIK--QIESESERKAFIVELRQLSRVNHPNIV 65
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
K+ C + V EY E GSL + LH ++ + + ++ + +
Sbjct: 66 KLYGACLNP-------VCLVMEYAEGGSLYNVLHGAEP---LPYYTAAHAMSWCLQCSQG 115
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLL-DHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
+ YLH ++H DLKP N+LL V +CDFG A + H +
Sbjct: 116 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN----------- 164
Query: 711 KGTVGYVAPEYGMGSEASMTGDIF----------TGRRPIDAV 743
KG+ ++APE GS S D+F T R+P D +
Sbjct: 165 KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI 207
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 95/197 (48%), Gaps = 26/197 (13%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
IG+G FG V G ++ VAVK I K +++F+AE + +RH NL++++ +
Sbjct: 29 IGKGEFGDVMLGDYRGNK--VAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVI- 83
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
+ KG + V EYM GSL D+L V L + ++DV AMEYL +
Sbjct: 84 -VEEKGGLY--IVTEYMAKGSLVDYLRSRGRSV----LGGDCLLKFSLDVCEAMEYLEGN 136
Query: 659 CQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVA 718
VH DL NVL+ D VA V DFGL K S Q DT K P V + A
Sbjct: 137 ---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-DTG-KLP---------VKWTA 182
Query: 719 PEYGMGSEASMTGDIFT 735
PE + S D+++
Sbjct: 183 PEALREKKFSTKSDVWS 199
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 73.2 bits (178), Expect = 5e-13, Method: Composition-based stats.
Identities = 56/223 (25%), Positives = 110/223 (49%), Gaps = 22/223 (9%)
Query: 512 SPMEKQFPMVSYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGA 571
+ M+ P E+ + + + + +G G +G VY+G + + VAVK + +
Sbjct: 1 TSMDPSSPNYDKWEMERT--DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTME 57
Query: 572 SRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQV 631
F+ E ++ I+H NL++++ +C+ + F + E+M G+L D+L + + Q
Sbjct: 58 VEEFLKEAAVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ- 111
Query: 632 EVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKF 691
EV + L+ +A ++SAMEYL + +H DL N L+ + + V DFGL++
Sbjct: 112 EVNAVVLLY---MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 165
Query: 692 LSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIF 734
++ T ++ G K + + APE ++ S+ D++
Sbjct: 166 MTG-------DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 125/273 (45%), Gaps = 37/273 (13%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+G G +G VY+G + + VAVK + + F+ E ++ I+H NL++++ +C+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
+ F + E+M G+L D+L + + Q ++S + + +A ++SAMEYL
Sbjct: 78 ----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVSAVVLLYMATQISSAMEYLE-- 126
Query: 659 CQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVA 718
+ +H DL N L+ + + V DFGL++ ++ T ++ G K + + A
Sbjct: 127 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-------DTFTAHAGAKFPIKWTA 178
Query: 719 PEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTNN 778
PE ++ S+ D++ G L E A + +DPS + E++ +
Sbjct: 179 PESLAYNKFSIKSDVWAF----------GVLLWEIATYGM--SPYPGIDPSQVYELLEKD 226
Query: 779 SMIQEDKRVKTEECLNAIIRTGVLCSMESPFER 811
++ + E C + C +P +R
Sbjct: 227 YRME-----RPEGCPEKVYELMRACWQWNPSDR 254
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 36/223 (16%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLI 591
E ++G+G+FG V K + VA+K ++ + ++F+ E L + H N++
Sbjct: 9 EIEVEEVVGRGAFGVVCKAKWRAKD--VAIK--QIESESERKAFIVELRQLSRVNHPNIV 64
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
K+ C + V EY E GSL + LH ++ + + ++ + +
Sbjct: 65 KLYGACLNP-------VCLVMEYAEGGSLYNVLHGAEP---LPYYTAAHAMSWCLQCSQG 114
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLL-DHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
+ YLH ++H DLKP N+LL V +CDFG A + H +
Sbjct: 115 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN----------- 163
Query: 711 KGTVGYVAPEYGMGSEASMTGDIF----------TGRRPIDAV 743
KG+ ++APE GS S D+F T R+P D +
Sbjct: 164 KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI 206
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 73.2 bits (178), Expect = 6e-13, Method: Composition-based stats.
Identities = 53/203 (26%), Positives = 103/203 (50%), Gaps = 20/203 (9%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLI 591
+ + + +G G +G VY+G + + VAVK + + F+ E ++ I+H NL+
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
+++ +C+ + F + E+M G+L D+L + + Q EV + L+ +A ++SA
Sbjct: 73 QLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ-EVNAVVLLY---MATQISSA 123
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
MEYL + +H DL N L+ + + V DFGL++ ++ T ++ G K
Sbjct: 124 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-------DTYTAHAGAK 173
Query: 712 GTVGYVAPEYGMGSEASMTGDIF 734
+ + APE ++ S+ D++
Sbjct: 174 FPIKWTAPESLAYNKFSIKSDVW 196
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 73.2 bits (178), Expect = 6e-13, Method: Composition-based stats.
Identities = 53/203 (26%), Positives = 103/203 (50%), Gaps = 20/203 (9%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLI 591
+ + + +G G +G VY+G + + VAVK + + F+ E ++ I+H NL+
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
+++ +C+ + F + E+M G+L D+L + + Q EV + L+ +A ++SA
Sbjct: 73 QLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ-EVNAVVLLY---MATQISSA 123
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
MEYL + +H DL N L+ + + V DFGL++ ++ T ++ G K
Sbjct: 124 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-------DTYTAHAGAK 173
Query: 712 GTVGYVAPEYGMGSEASMTGDIF 734
+ + APE ++ S+ D++
Sbjct: 174 FPIKWTAPESLAYNKFSIKSDVW 196
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 114/241 (47%), Gaps = 28/241 (11%)
Query: 495 TIVYARKRRSAQKFVDTSPMEKQFPMVSYAELSKATGEFSSSNMIGQGSFGYVYKGTLGE 554
T+ Y +R+ SP +Y + + + + +G G +G VY+G +
Sbjct: 192 TLHYPAPKRNKPTIYGVSP--------NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK 243
Query: 555 DEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEY 614
+ VAVK + + F+ E ++ I+H NL++++ +C+ + F + E+
Sbjct: 244 YSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT----REPPF-YIITEF 297
Query: 615 MENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVL 674
M G+L D+L + + Q ++S + + +A ++SAMEYL + +H +L N L
Sbjct: 298 MTYGNLLDYLRECNRQ----EVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCL 350
Query: 675 LDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIF 734
+ + + V DFGL++ ++ T ++ G K + + APE ++ S+ D++
Sbjct: 351 VGENHLVKVADFGLSRLMTG-------DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 403
Query: 735 T 735
Sbjct: 404 A 404
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 522 SYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEA 581
+Y + + + + +G G +G VY+G + + VAVK + + F+ E
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 63
Query: 582 LRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQR 641
++ I+H NL++++ +C+ + F + E+M G+L D+L + + Q EV + L+
Sbjct: 64 MKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ-EVNAVVLLY- 116
Query: 642 VNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV 701
+A ++SAMEYL + +H DL N L+ + + V DFGL++ ++
Sbjct: 117 --MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG------- 164
Query: 702 KTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
T ++ G K + + APE ++ S+ D++
Sbjct: 165 DTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWA 198
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 522 SYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEA 581
+Y + + + + +G G +G VY+G + + VAVK + + F+ E
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 75
Query: 582 LRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQR 641
++ I+H NL++++ +C+ + F + E+M G+L D+L + + Q EV + L+
Sbjct: 76 MKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ-EVNAVVLLY- 128
Query: 642 VNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV 701
+A ++SAMEYL + +H DL N L+ + + V DFGL++ ++
Sbjct: 129 --MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG------- 176
Query: 702 KTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
T ++ G K + + APE ++ S+ D++
Sbjct: 177 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 210
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 100/214 (46%), Gaps = 22/214 (10%)
Query: 506 QKFVDTSPMEKQFPMVSYAELSKA--TGEFSSSNMIGQGSFGYVYKGTL---GEDEMIVA 560
+ +VD P + P + E +K S ++G G FG V G L + E+ VA
Sbjct: 20 RTYVD--PHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVA 77
Query: 561 VKVINLKY-KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGS 619
+K + + Y + R F+ E + H N+I++ + + + V E MENGS
Sbjct: 78 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV-----MIVTEXMENGS 132
Query: 620 LKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM 679
L +L + D Q ++IQ V + +AS M+YL VH DL N+L++ ++
Sbjct: 133 LDSFLRKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNL 184
Query: 680 VAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGT 713
V V DFGL++ L D + A T I ++ T
Sbjct: 185 VCKVSDFGLSRVLEDDP-EAAYTTRGGKIPIRWT 217
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 522 SYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEA 581
+Y + + + + +G G +G VY+G + + VAVK + + F+ E
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 64
Query: 582 LRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQR 641
++ I+H NL++++ +C+ + F + E+M G+L D+L + + Q EV + L+
Sbjct: 65 MKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ-EVNAVVLLY- 117
Query: 642 VNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV 701
+A ++SAMEYL + +H DL N L+ + + V DFGL++ ++
Sbjct: 118 --MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG------- 165
Query: 702 KTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
T ++ G K + + APE ++ S+ D++
Sbjct: 166 DTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWA 199
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 522 SYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEA 581
+Y + + + + +G G +G VY+G + + VAVK + + F+ E
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 64
Query: 582 LRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQR 641
++ I+H NL++++ +C+ + F + E+M G+L D+L + + Q EV + L+
Sbjct: 65 MKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ-EVNAVVLLY- 117
Query: 642 VNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV 701
+A ++SAMEYL + +H DL N L+ + + V DFGL++ ++
Sbjct: 118 --MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG------- 165
Query: 702 KTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
T ++ G K + + APE ++ S+ D++
Sbjct: 166 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 199
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 522 SYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEA 581
+Y + + + + +G G +G VY+G + + VAVK + + F+ E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 67
Query: 582 LRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQR 641
++ I+H NL++++ +C+ + F + E+M G+L D+L + + Q EV + L+
Sbjct: 68 MKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ-EVNAVVLLY- 120
Query: 642 VNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV 701
+A ++SAMEYL + +H DL N L+ + + V DFGL++ ++
Sbjct: 121 --MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG------- 168
Query: 702 KTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
T ++ G K + + APE ++ S+ D++
Sbjct: 169 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 202
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 106/214 (49%), Gaps = 20/214 (9%)
Query: 522 SYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEA 581
+Y + + + + +G G +G VY+G + + VAVK + + F+ E
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAV 64
Query: 582 LRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQR 641
++ I+H NL++++ +C+ + F + E+M G+L D+L + + Q EV + L+
Sbjct: 65 MKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ-EVNAVVLLY- 117
Query: 642 VNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV 701
+A ++SAMEYL + +H DL N L+ + + V DFGL++ ++
Sbjct: 118 --MATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG------- 165
Query: 702 KTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
T ++ G K + + APE ++ S+ D++
Sbjct: 166 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 199
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 95/197 (48%), Gaps = 26/197 (13%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
IG+G FG V G ++ VAVK I K +++F+AE + +RH NL++++ +
Sbjct: 201 IGKGEFGDVMLGDYRGNK--VAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVI- 255
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
+ KG + V EYM GSL D+L V L + ++DV AMEYL +
Sbjct: 256 -VEEKGGLY--IVTEYMAKGSLVDYLRSRGRSV----LGGDCLLKFSLDVCEAMEYLEGN 308
Query: 659 CQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVA 718
VH DL NVL+ D VA V DFGL K S Q DT K P V + A
Sbjct: 309 ---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-DTG-KLP---------VKWTA 354
Query: 719 PEYGMGSEASMTGDIFT 735
PE + S D+++
Sbjct: 355 PEALREKKFSTKSDVWS 371
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 89/185 (48%), Gaps = 18/185 (9%)
Query: 533 FSSSNMIGQGSFGYVYKGTL---GEDEMIVAVKVINLKY-KGASRSFVAECEALRNIRHR 588
S ++G G FG V G L + E+ VA+K + + Y + R F+ E + H
Sbjct: 18 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N+I++ + + + V E MENGSL +L + D Q ++IQ V + +
Sbjct: 78 NIIRLEGVVTKSKPV-----MIVTEXMENGSLDSFLRKHDAQ-----FTVIQLVGMLRGI 127
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
AS M+YL VH DL N+L++ ++V V DFGL++ L D + A T I
Sbjct: 128 ASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP-EAAYTTRGGKI 183
Query: 709 GLKGT 713
++ T
Sbjct: 184 PIRWT 188
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 113/241 (46%), Gaps = 28/241 (11%)
Query: 495 TIVYARKRRSAQKFVDTSPMEKQFPMVSYAELSKATGEFSSSNMIGQGSFGYVYKGTLGE 554
T+ Y +R+ SP +Y + + + + +G G +G VY+G +
Sbjct: 189 TLHYPAPKRNKPTVYGVSP--------NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK 240
Query: 555 DEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEY 614
+ VAVK + F+ E ++ I+H NL++++ +C+ + F + E+
Sbjct: 241 YSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT----REPPF-YIITEF 294
Query: 615 MENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVL 674
M G+L D+L + + Q EV + L+ +A ++SAMEYL + +H +L N L
Sbjct: 295 MTYGNLLDYLRECNRQ-EVNAVVLLY---MATQISSAMEYLE---KKNFIHRNLAARNCL 347
Query: 675 LDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIF 734
+ + + V DFGL++ ++ T ++ G K + + APE ++ S+ D++
Sbjct: 348 VGENHLVKVADFGLSRLMTG-------DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 400
Query: 735 T 735
Sbjct: 401 A 401
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 114/241 (47%), Gaps = 28/241 (11%)
Query: 495 TIVYARKRRSAQKFVDTSPMEKQFPMVSYAELSKATGEFSSSNMIGQGSFGYVYKGTLGE 554
T+ Y +R+ SP +Y + + + + +G G +G VY+G +
Sbjct: 231 TLHYPAPKRNKPTVYGVSP--------NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKK 282
Query: 555 DEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEY 614
+ VAVK + + F+ E ++ I+H NL++++ +C+ + F + E+
Sbjct: 283 YSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT----REPPF-YIITEF 336
Query: 615 MENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVL 674
M G+L D+L + + Q EV + L+ +A ++SAMEYL + +H +L N L
Sbjct: 337 MTYGNLLDYLRECNRQ-EVNAVVLLY---MATQISSAMEYLE---KKNFIHRNLAARNCL 389
Query: 675 LDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIF 734
+ + + V DFGL++ ++ T ++ G K + + APE ++ S+ D++
Sbjct: 390 VGENHLVKVADFGLSRLMTG-------DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 442
Query: 735 T 735
Sbjct: 443 A 443
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 97/197 (49%), Gaps = 22/197 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+G G +G VY G + + VAVK + + F+ E ++ I+H NL++++ +C+
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 599 -STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
F V EYM G+L D+L + + + EV + L+ +A ++SAMEYL
Sbjct: 99 LEPPF------YIVTEYMPYGNLLDYLRECNRE-EVTAVVLLY---MATQISSAMEYLE- 147
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+ +H DL N L+ + V V DFGL++ ++ T ++ G K + +
Sbjct: 148 --KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTG-------DTYTAHAGAKFPIKWT 198
Query: 718 APEYGMGSEASMTGDIF 734
APE + S+ D++
Sbjct: 199 APESLAYNTFSIKSDVW 215
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 108/227 (47%), Gaps = 31/227 (13%)
Query: 522 SYAELSKATGEFSSS---------NMIGQGSFGYVYKGTL---GEDEMIVAVKVINLKY- 568
+Y + ++A +F+ +IG G FG V G L G+ ++ VA+K + + Y
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 569 KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSD 628
+ R F+ E + H N++ + + + +G V E+MENG+L +L + D
Sbjct: 85 EKQRRDFLCEASIMGQFDHPNVVHLEGVVT----RGKPV-MIVIEFMENGALDAFLRKHD 139
Query: 629 DQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688
Q ++IQ V + +A+ M YL VH DL N+L++ ++V V DFGL
Sbjct: 140 GQ-----FTVIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGL 191
Query: 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
++ + D AV T + G K V + APE + + D+++
Sbjct: 192 SRVIEDDP--EAVYT---TTGGKIPVRWTAPEAIQYRKFTSASDVWS 233
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 19/205 (9%)
Query: 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITI 596
++G+G FG K T E ++ +K + + R+F+ E + +R + H N++K I +
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 597 CSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLH 656
+K F+ EY++ G+L+ + D Q QRV+ A D+AS M YLH
Sbjct: 76 L----YKDKRLN-FITEYIKGGTLRGIIKSMDSQ-----YPWSQRVSFAKDIASGMAYLH 125
Query: 657 HHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLD----TAVKTP--SSSIGL 710
++H DL N L+ + V DFGLA+ + D + ++K P +
Sbjct: 126 SMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTV 182
Query: 711 KGTVGYVAPEYGMGSEASMTGDIFT 735
G ++APE G D+F+
Sbjct: 183 VGNPYWMAPEMINGRSYDEKVDVFS 207
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 70.9 bits (172), Expect = 3e-12, Method: Composition-based stats.
Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 36/203 (17%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+G G FG V G + VA+K+I + + F+ E + + N+ H L+++ +C+
Sbjct: 23 LGTGQFGVVKYGKW-RGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 599 STDFKGTDFKAFVF-EYMENGSLKDWLH------QSDDQVEVCKLSLIQRVNIAIDVASA 651
F+ EYM NG L ++L Q+ +E+CK DV A
Sbjct: 81 KQR------PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK-----------DVCEA 123
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
MEYL +H DL N L++ V V DFGL++++ D + +SS+G K
Sbjct: 124 MEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-------TSSVGSK 173
Query: 712 GTVGYVAPEYGMGSEASMTGDIF 734
V + PE M S+ S DI+
Sbjct: 174 FPVRWSPPEVLMYSKFSSKSDIW 196
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 70.9 bits (172), Expect = 3e-12, Method: Composition-based stats.
Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 36/203 (17%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+G G FG V G + VA+K+I + + F+ E + + N+ H L+++ +C+
Sbjct: 16 LGTGQFGVVKYGKW-RGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 599 STDFKGTDFKAFVF-EYMENGSLKDWLH------QSDDQVEVCKLSLIQRVNIAIDVASA 651
F+ EYM NG L ++L Q+ +E+CK DV A
Sbjct: 74 KQR------PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK-----------DVCEA 116
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
MEYL +H DL N L++ V V DFGL++++ D + +SS+G K
Sbjct: 117 MEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-------TSSVGSK 166
Query: 712 GTVGYVAPEYGMGSEASMTGDIF 734
V + PE M S+ S DI+
Sbjct: 167 FPVRWSPPEVLMYSKFSSKSDIW 189
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 70.9 bits (172), Expect = 3e-12, Method: Composition-based stats.
Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 36/203 (17%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+G G FG V G + VA+K+I + + F+ E + + N+ H L+++ +C+
Sbjct: 17 LGTGQFGVVKYGKW-RGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 599 STDFKGTDFKAFVF-EYMENGSLKDWLH------QSDDQVEVCKLSLIQRVNIAIDVASA 651
F+ EYM NG L ++L Q+ +E+CK DV A
Sbjct: 75 KQR------PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK-----------DVCEA 117
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
MEYL +H DL N L++ V V DFGL++++ D + +SS+G K
Sbjct: 118 MEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-------TSSVGSK 167
Query: 712 GTVGYVAPEYGMGSEASMTGDIF 734
V + PE M S+ S DI+
Sbjct: 168 FPVRWSPPEVLMYSKFSSKSDIW 190
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 70.9 bits (172), Expect = 3e-12, Method: Composition-based stats.
Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 36/203 (17%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+G G FG V G + VA+K+I + + F+ E + + N+ H L+++ +C+
Sbjct: 12 LGTGQFGVVKYGKW-RGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 599 STDFKGTDFKAFVF-EYMENGSLKDWLH------QSDDQVEVCKLSLIQRVNIAIDVASA 651
F+ EYM NG L ++L Q+ +E+CK DV A
Sbjct: 70 KQR------PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK-----------DVCEA 112
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
MEYL +H DL N L++ V V DFGL++++ D + +SS+G K
Sbjct: 113 MEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-------TSSVGSK 162
Query: 712 GTVGYVAPEYGMGSEASMTGDIF 734
V + PE M S+ S DI+
Sbjct: 163 FPVRWSPPEVLMYSKFSSKSDIW 185
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 121/278 (43%), Gaps = 49/278 (17%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGAS-RSFVAECEALRNIRHRNLIKIITIC 597
+G G FG V+ G VAVK +LK S +F+AE ++ ++H+ L+++ +
Sbjct: 30 LGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 86
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + EYMENGSL D+L KL++ + +++A +A M ++
Sbjct: 87 TQEPI------YIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE 136
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+H DL+ +N+L+ + + DFGLA+ + D++ ++ G K + +
Sbjct: 137 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-------TAREGAKFPIKWT 186
Query: 718 APEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTN 777
APE ++ D+++ + + G I P MTN
Sbjct: 187 APEAINYGTFTIKSDVWSFGILLTEIVTHGR----------------IPYPG-----MTN 225
Query: 778 NSMIQEDKR----VKTEECLNAIIRTGVLCSMESPFER 811
+IQ +R V+ + C + + LC E P +R
Sbjct: 226 PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDR 263
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 121/278 (43%), Gaps = 49/278 (17%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGAS-RSFVAECEALRNIRHRNLIKIITIC 597
+G G FG V+ G VAVK +LK S +F+AE ++ ++H+ L+++ +
Sbjct: 29 LGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 85
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + EYMENGSL D+L KL++ + +++A +A M ++
Sbjct: 86 TQEPI------YIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE 135
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+H DL+ +N+L+ + + DFGLA+ + D++ ++ G K + +
Sbjct: 136 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-------TAREGAKFPIKWT 185
Query: 718 APEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTN 777
APE ++ D+++ + + G I P MTN
Sbjct: 186 APEAINYGTFTIKSDVWSFGILLTEIVTHGR----------------IPYPG-----MTN 224
Query: 778 NSMIQEDKR----VKTEECLNAIIRTGVLCSMESPFER 811
+IQ +R V+ + C + + LC E P +R
Sbjct: 225 PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDR 262
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 24/198 (12%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+G G FG V G + VA+K+I + + F+ E + + N+ H L+++ +C+
Sbjct: 32 LGTGQFGVVKYGKW-RGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 599 STDFKGTDFKAFVF-EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
F+ EYM NG L ++L + + + +L + + DV AMEYL
Sbjct: 90 KQR------PIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLE- 137
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+H DL N L++ V V DFGL++++ D + +SS+G K V +
Sbjct: 138 --SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-------ETSSVGSKFPVRWS 188
Query: 718 APEYGMGSEASMTGDIFT 735
PE M S+ S DI+
Sbjct: 189 PPEVLMYSKFSSKSDIWA 206
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 24/198 (12%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+G G FG V G + VA+K+I + + F+ E + + N+ H L+++ +C+
Sbjct: 32 LGTGQFGVVKYGKW-RGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 599 STDFKGTDFKAFVF-EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
F+ EYM NG L ++L + + + +L + + DV AMEYL
Sbjct: 90 KQR------PIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLE- 137
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+H DL N L++ V V DFGL++++ D + +SS+G K V +
Sbjct: 138 --SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-------TSSVGSKFPVRWS 188
Query: 718 APEYGMGSEASMTGDIFT 735
PE M S+ S DI+
Sbjct: 189 PPEVLMYSKFSSKSDIWA 206
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 121/278 (43%), Gaps = 49/278 (17%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGAS-RSFVAECEALRNIRHRNLIKIITIC 597
+G G FG V+ G VAVK +LK S +F+AE ++ ++H+ L+++ +
Sbjct: 27 LGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + EYMENGSL D+L KL++ + +++A +A M ++
Sbjct: 84 TQEPI------YIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE 133
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+H DL+ +N+L+ + + DFGLA+ + D++ ++ G K + +
Sbjct: 134 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-------TAREGAKFPIKWT 183
Query: 718 APEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTN 777
APE ++ D+++ + + G I P MTN
Sbjct: 184 APEAINYGTFTIKSDVWSFGILLTEIVTHGR----------------IPYPG-----MTN 222
Query: 778 NSMIQEDKR----VKTEECLNAIIRTGVLCSMESPFER 811
+IQ +R V+ + C + + LC E P +R
Sbjct: 223 PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDR 260
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 121/278 (43%), Gaps = 49/278 (17%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGAS-RSFVAECEALRNIRHRNLIKIITIC 597
+G G FG V+ G VAVK +LK S +F+AE ++ ++H+ L+++ +
Sbjct: 21 LGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + EYMENGSL D+L KL++ + +++A +A M ++
Sbjct: 78 TQEPI------YIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE 127
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+H DL+ +N+L+ + + DFGLA+ + D++ ++ G K + +
Sbjct: 128 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-------TAREGAKFPIKWT 177
Query: 718 APEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTN 777
APE ++ D+++ + + G I P MTN
Sbjct: 178 APEAINYGTFTIKSDVWSFGILLTEIVTHGR----------------IPYPG-----MTN 216
Query: 778 NSMIQEDKR----VKTEECLNAIIRTGVLCSMESPFER 811
+IQ +R V+ + C + + LC E P +R
Sbjct: 217 PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDR 254
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 121/278 (43%), Gaps = 49/278 (17%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGAS-RSFVAECEALRNIRHRNLIKIITIC 597
+G G FG V+ G VAVK +LK S +F+AE ++ ++H+ L+++ +
Sbjct: 31 LGAGQFGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 87
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + EYMENGSL D+L KL++ + +++A +A M ++
Sbjct: 88 TQEPI------YIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE 137
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+H DL+ +N+L+ + + DFGLA+ + D++ ++ G K + +
Sbjct: 138 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-------TAREGAKFPIKWT 187
Query: 718 APEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTN 777
APE ++ D+++ + + G I P MTN
Sbjct: 188 APEAINYGTFTIKSDVWSFGILLTEIVTHGR----------------IPYPG-----MTN 226
Query: 778 NSMIQEDKR----VKTEECLNAIIRTGVLCSMESPFER 811
+IQ +R V+ + C + + LC E P +R
Sbjct: 227 PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDR 264
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 69.7 bits (169), Expect = 7e-12, Method: Composition-based stats.
Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 43/233 (18%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+G G FG V G + + VAVK+I + + F E + + + H L+K +CS
Sbjct: 16 LGSGQFGVVKLGKW-KGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 599 STDFKGTDFKAFVF-EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
++ ++ EY+ NG L ++L +E +L + + DV M +L
Sbjct: 74 K------EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQL-----LEMCYDVCEGMAFLES 122
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
H +H DL N L+D D+ V DFG+ +++ D Q SS+G K V +
Sbjct: 123 H---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY-------VSSVGTKFPVKWS 172
Query: 718 APE------YGMGSEASMTG----DIFT-GRRPIDAVFN--------EGHSLH 751
APE Y S+ G ++F+ G+ P D N +GH L+
Sbjct: 173 APEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLY 225
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 102/224 (45%), Gaps = 22/224 (9%)
Query: 527 SKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN---LKYKGASRSFVAECEALR 583
+ G + +G+GSFG V T + + VA+K I+ LK E L+
Sbjct: 5 KRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLK 64
Query: 584 NIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVN 643
+RH ++IK+ + ++ TD V EY G L D++ + E Q++
Sbjct: 65 LLRHPHIIKLYDVITTP----TDI-VMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQII 118
Query: 644 IAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQ-LDTAVK 702
AI EY H H +VH DLKP N+LLD ++ + DFGL+ ++D L T+
Sbjct: 119 CAI------EYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCG 169
Query: 703 TPSSSIG--LKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVF 744
+P+ + + G + Y PE + S + + GR P D F
Sbjct: 170 SPNYAAPEVINGKL-YAGPEVDVWSCGIVLYVMLVGRLPFDDEF 212
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 23/167 (13%)
Query: 539 IGQGSFGYV-----YKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKI 593
+G+G+FG V Y + +D+M+VAVK + A + F E E L N++H +++K
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 594 ITICSSTDFKGTDFKAFVFEYMENGSLKDWL--HQSDDQVEV--------CKLSLIQRVN 643
+C D VFEYM++G L +L H D + V +L L Q ++
Sbjct: 83 YGVCGD-----GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 137
Query: 644 IAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690
IA +AS M YL VH DL N L+ +++ + DFG+++
Sbjct: 138 IASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR 181
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 24/189 (12%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNI--RHRNLIKIITI 596
IG+G FG V++G +E VAVK+ + + RS+ E E + + RH N++ I
Sbjct: 50 IGKGRFGEVWRGKWRGEE--VAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAA 104
Query: 597 CSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLH 656
+ + T V +Y E+GSL D+L++ VE + +A+ AS + +LH
Sbjct: 105 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTVTVEGM-------IKLALSTASGLAHLH 156
Query: 657 HHC-----QPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
+P + H DLK N+L+ + + D GLA D DT P+ +G K
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTK 215
Query: 712 GTVGYVAPE 720
Y+APE
Sbjct: 216 ---RYMAPE 221
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 24/189 (12%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNI--RHRNLIKIITI 596
IG+G FG V++G +E VAVK+ + + RS+ E E + + RH N++ I
Sbjct: 37 IGKGRFGEVWRGKWRGEE--VAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAA 91
Query: 597 CSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLH 656
+ + T V +Y E+GSL D+L++ VE + +A+ AS + +LH
Sbjct: 92 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTVTVE-------GMIKLALSTASGLAHLH 143
Query: 657 HHC-----QPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
+P + H DLK N+L+ + + D GLA D DT P+ +G K
Sbjct: 144 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTK 202
Query: 712 GTVGYVAPE 720
Y+APE
Sbjct: 203 ---RYMAPE 208
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 127/306 (41%), Gaps = 44/306 (14%)
Query: 536 SNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNI-RHRNLI 591
++IG+G+FG V K + +D + + + +K K R F E E L + H N+I
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQS-----DDQVEVCK-----LSLIQR 641
++ C + +G + EY +G+L D+L +S D + LS Q
Sbjct: 80 NLLGAC---EHRG--YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 642 VNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA------------ 689
++ A DVA M+YL Q +H DL N+L+ + VA + DFGL+
Sbjct: 135 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 191
Query: 690 ----KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRP----ID 741
++++ L+ +V T +S + G + + G MT + P ++
Sbjct: 192 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLE 251
Query: 742 AVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGV 801
N +++ + EK E PS +++ N M++E K G+
Sbjct: 252 KPLNCDDEVYDLMRQCWREKPYE--RPSFAQILVSLNRMLEERKTYVNTTLYEKFTYAGI 309
Query: 802 LCSMES 807
CS E
Sbjct: 310 DCSAEE 315
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 539 IGQGSFGYV----YKGTLGEDEMIVAVKVINLKYKGAS-RSFVAECEALRNIRHRNLIKI 593
+G+G FG V Y VAVK + + G E E LRN+ H N++K
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 594 ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAME 653
IC+ G + E++ +GSLK++L ++ + K++L Q++ A+ + M+
Sbjct: 89 KGICTEDGGNGI---KLIMEFLPSGSLKEYLPKNKN-----KINLKQQLKYAVQICKGMD 140
Query: 654 YLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGT 713
YL VH DL NVL++ + + DFGL K + + VK S
Sbjct: 141 YLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDS-----P 192
Query: 714 VGYVAPEYGMGSEASMTGDIFT 735
V + APE M S+ + D+++
Sbjct: 193 VFWYAPECLMQSKFYIASDVWS 214
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 527 SKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRS-FVAECEALRNI 585
++ G + +G G FGYV + + VA+K + +R + E + ++ +
Sbjct: 10 TQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL 69
Query: 586 RHRNLIKIITICSS-TDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNI 644
H N++ + D EY E G L+ +L+Q ++ C L +
Sbjct: 70 NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFEN---CCGLKEGPIRTL 126
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVCDFGLAKFLSDHQLDTAV 701
D++SA+ YLH + ++H DLKP N++L ++ + D G AK L +L T
Sbjct: 127 LSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE- 182
Query: 702 KTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
GT+ Y+APE + ++T D ++
Sbjct: 183 --------FVGTLQYLAPELLEQKKYTVTVDYWS 208
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 539 IGQGSFGYV----YKGTLGEDEMIVAVKVINLKYKGAS-RSFVAECEALRNIRHRNLIKI 593
+G+G FG V Y VAVK + + G E E LRN+ H N++K
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 594 ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAME 653
IC+ G + E++ +GSLK++L ++ + K++L Q++ A+ + M+
Sbjct: 77 KGICTEDGGNGI---KLIMEFLPSGSLKEYLPKNKN-----KINLKQQLKYAVQICKGMD 128
Query: 654 YLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGT 713
YL VH DL NVL++ + + DFGL K + + VK S
Sbjct: 129 YLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDS-----P 180
Query: 714 VGYVAPEYGMGSEASMTGDIFT 735
V + APE M S+ + D+++
Sbjct: 181 VFWYAPECLMQSKFYIASDVWS 202
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 20/214 (9%)
Query: 527 SKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRS-FVAECEALRNI 585
++ G + +G G FGYV + + VA+K + +R + E + ++ +
Sbjct: 11 TQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL 70
Query: 586 RHRNLIKIITICSS-TDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNI 644
H N++ + D EY E G L+ +L+Q ++ C L +
Sbjct: 71 NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFEN---CCGLKEGPIRTL 127
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVCDFGLAKFLSDHQLDTAV 701
D++SA+ YLH + ++H DLKP N++L ++ + D G AK L +L T
Sbjct: 128 LSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE- 183
Query: 702 KTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
GT+ Y+APE + ++T D ++
Sbjct: 184 --------FVGTLQYLAPELLEQKKYTVTVDYWS 209
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 48/237 (20%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL-KYKGAS------RSFVAECEA 581
A E IG+G FG V+KG L +D+ +VA+K + L +G + + F E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 582 LRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQR 641
+ N+ H N++K+ + + V E++ G L H+ D+ K S+ +
Sbjct: 77 MSNLNHPNIVKLYGLMHNP-------PRMVMEFVPCGDL---YHRLLDKAHPIKWSV--K 124
Query: 642 VNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLL-----DHDMVAHVCDFGLAKFLSDHQ 696
+ + +D+A +EY+ + PP+VH DL+ N+ L + + A V DFGL++
Sbjct: 125 LRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ------ 177
Query: 697 LDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGD------------IFTGRRPID 741
++ S GL G ++APE E S T I TG P D
Sbjct: 178 -----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 127/306 (41%), Gaps = 44/306 (14%)
Query: 536 SNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNI-RHRNLI 591
++IG+G+FG V K + +D + + + +K K R F E E L + H N+I
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQS-----DDQVEVCK-----LSLIQR 641
++ C + +G + EY +G+L D+L +S D + LS Q
Sbjct: 90 NLLGAC---EHRG--YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 642 VNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA------------ 689
++ A DVA M+YL Q +H DL N+L+ + VA + DFGL+
Sbjct: 145 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 201
Query: 690 ----KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRP----ID 741
++++ L+ +V T +S + G + + G MT + P ++
Sbjct: 202 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLE 261
Query: 742 AVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGV 801
N +++ + EK E PS +++ N M++E K G+
Sbjct: 262 KPLNCDDEVYDLMRQCWREKPYE--RPSFAQILVSLNRMLEERKTYVNTTLYEKFTYAGI 319
Query: 802 LCSMES 807
CS E
Sbjct: 320 DCSAEE 325
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 24/189 (12%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNI--RHRNLIKIITI 596
IG+G FG V++G +E VAVK+ + + RS+ E E + + RH N++ I
Sbjct: 14 IGKGRFGEVWRGKWRGEE--VAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAA 68
Query: 597 CSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLH 656
+ + T V +Y E+GSL D+L++ VE + +A+ AS + +LH
Sbjct: 69 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTVTVE-------GMIKLALSTASGLAHLH 120
Query: 657 HHC-----QPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
+P + H DLK N+L+ + + D GLA D DT P+ +G K
Sbjct: 121 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTK 179
Query: 712 GTVGYVAPE 720
Y+APE
Sbjct: 180 ---RYMAPE 185
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 24/189 (12%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNI--RHRNLIKIITI 596
IG+G FG V++G +E VAVK+ + + RS+ E E + + RH N++ I
Sbjct: 17 IGKGRFGEVWRGKWRGEE--VAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAA 71
Query: 597 CSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLH 656
+ + T V +Y E+GSL D+L++ VE + +A+ AS + +LH
Sbjct: 72 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTVTVE-------GMIKLALSTASGLAHLH 123
Query: 657 HHC-----QPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
+P + H DLK N+L+ + + D GLA D DT P+ +G K
Sbjct: 124 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTK 182
Query: 712 GTVGYVAPE 720
Y+APE
Sbjct: 183 ---RYMAPE 188
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 132/302 (43%), Gaps = 39/302 (12%)
Query: 536 SNMIGQGSFGYVYKGTLGEDE---MIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNLI 591
+ +IG+G FG VY GTL +++ + AVK +N + G F+ E +++ H N++
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
++ IC ++ G+ V YM++G L++++ V L + + VA
Sbjct: 154 SLLGICLRSE--GSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 204
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
M++L VH DL N +LD V DFGLA+ + D + D+ + G K
Sbjct: 205 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV----HNKTGAK 257
Query: 712 GTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEF-AKTALPEKVMEIVDPSL 770
V ++A E S+ FT + V++ G L E + A P + D ++
Sbjct: 258 LPVKWMALE-------SLQTQKFTTK---SDVWSFGVLLWELMTRGAPPYPDVNTFDITV 307
Query: 771 LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRETFLG 830
++Q + ++ E C + + + C R ++V+++ TF+G
Sbjct: 308 Y--------LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 359
Query: 831 RR 832
Sbjct: 360 EH 361
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 24/189 (12%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNI--RHRNLIKIITI 596
IG+G FG V++G +E VAVK+ + + RS+ E E + + RH N++ I
Sbjct: 11 IGKGRFGEVWRGKWRGEE--VAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAA 65
Query: 597 CSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLH 656
+ + T V +Y E+GSL D+L++ VE + +A+ AS + +LH
Sbjct: 66 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTVTVE-------GMIKLALSTASGLAHLH 117
Query: 657 HHC-----QPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
+P + H DLK N+L+ + + D GLA D DT P+ +G K
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTK 176
Query: 712 GTVGYVAPE 720
Y+APE
Sbjct: 177 ---RYMAPE 182
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 68.6 bits (166), Expect = 1e-11, Method: Composition-based stats.
Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 36/203 (17%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+G G FG V G + VA+K+I + + F+ E + + N+ H L+++ +C+
Sbjct: 17 LGTGQFGVVKYGKW-RGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 599 STDFKGTDFKAFVF-EYMENGSLKDWLH------QSDDQVEVCKLSLIQRVNIAIDVASA 651
F+ EYM NG L ++L Q+ +E+CK DV A
Sbjct: 75 KQR------PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK-----------DVCEA 117
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
MEYL +H DL N L++ V V DFGL++++ D + +SS G K
Sbjct: 118 MEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-------TSSRGSK 167
Query: 712 GTVGYVAPEYGMGSEASMTGDIF 734
V + PE M S+ S DI+
Sbjct: 168 FPVRWSPPEVLMYSKFSSKSDIW 190
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 24/189 (12%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNI--RHRNLIKIITI 596
IG+G FG V++G +E VAVK+ + + RS+ E E + + RH N++ I
Sbjct: 12 IGKGRFGEVWRGKWRGEE--VAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAA 66
Query: 597 CSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLH 656
+ + T V +Y E+GSL D+L++ VE + +A+ AS + +LH
Sbjct: 67 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTVTVE-------GMIKLALSTASGLAHLH 118
Query: 657 HHC-----QPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
+P + H DLK N+L+ + + D GLA D DT P+ +G K
Sbjct: 119 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTK 177
Query: 712 GTVGYVAPE 720
Y+APE
Sbjct: 178 ---RYMAPE 183
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 132/302 (43%), Gaps = 39/302 (12%)
Query: 536 SNMIGQGSFGYVYKGTLGEDE---MIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNLI 591
+ +IG+G FG VY GTL +++ + AVK +N + G F+ E +++ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
++ IC ++ G+ V YM++G L++++ V L + + VA
Sbjct: 95 SLLGICLRSE--GSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 145
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
M++L VH DL N +LD V DFGLA+ + D + D+ + G K
Sbjct: 146 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV----HNKTGAK 198
Query: 712 GTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEF-AKTALPEKVMEIVDPSL 770
V ++A E S+ FT + V++ G L E + A P + D ++
Sbjct: 199 LPVKWMALE-------SLQTQKFTTK---SDVWSFGVLLWELMTRGAPPYPDVNTFDITV 248
Query: 771 LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRETFLG 830
++Q + ++ E C + + + C R ++V+++ TF+G
Sbjct: 249 Y--------LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 300
Query: 831 RR 832
Sbjct: 301 EH 302
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 132/302 (43%), Gaps = 39/302 (12%)
Query: 536 SNMIGQGSFGYVYKGTLGEDE---MIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNLI 591
+ +IG+G FG VY GTL +++ + AVK +N + G F+ E +++ H N++
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
++ IC ++ G+ V YM++G L++++ V L + + VA
Sbjct: 100 SLLGICLRSE--GSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 150
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
M++L VH DL N +LD V DFGLA+ + D + D+ + G K
Sbjct: 151 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV----HNKTGAK 203
Query: 712 GTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEF-AKTALPEKVMEIVDPSL 770
V ++A E S+ FT + V++ G L E + A P + D ++
Sbjct: 204 LPVKWMALE-------SLQTQKFTTK---SDVWSFGVLLWELMTRGAPPYPDVNTFDITV 253
Query: 771 LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRETFLG 830
++Q + ++ E C + + + C R ++V+++ TF+G
Sbjct: 254 Y--------LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 305
Query: 831 RR 832
Sbjct: 306 EH 307
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 132/302 (43%), Gaps = 39/302 (12%)
Query: 536 SNMIGQGSFGYVYKGTLGEDE---MIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNLI 591
+ +IG+G FG VY GTL +++ + AVK +N + G F+ E +++ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
++ IC ++ G+ V YM++G L++++ V L + + VA
Sbjct: 95 SLLGICLRSE--GSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 145
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
M++L VH DL N +LD V DFGLA+ + D + D+ + G K
Sbjct: 146 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV----HNKTGAK 198
Query: 712 GTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEF-AKTALPEKVMEIVDPSL 770
V ++A E S+ FT + V++ G L E + A P + D ++
Sbjct: 199 LPVKWMALE-------SLQTQKFTTK---SDVWSFGVLLWELMTRGAPPYPDVNTFDITV 248
Query: 771 LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRETFLG 830
++Q + ++ E C + + + C R ++V+++ TF+G
Sbjct: 249 Y--------LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 300
Query: 831 RR 832
Sbjct: 301 EH 302
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 104/237 (43%), Gaps = 48/237 (20%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL-KYKGAS------RSFVAECEA 581
A E IG+G FG V+KG L +D+ +VA+K + L +G + + F E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 582 LRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQR 641
+ N+ H N++K+ + + V E++ G L H+ D+ K S+ +
Sbjct: 77 MSNLNHPNIVKLYGLMHNP-------PRMVMEFVPCGDL---YHRLLDKAHPIKWSV--K 124
Query: 642 VNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLL-----DHDMVAHVCDFGLAKFLSDHQ 696
+ + +D+A +EY+ + PP+VH DL+ N+ L + + A V DFG
Sbjct: 125 LRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG--------- 174
Query: 697 LDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGD------------IFTGRRPID 741
T+ ++ S GL G ++APE E S T I TG P D
Sbjct: 175 --TSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 132/302 (43%), Gaps = 39/302 (12%)
Query: 536 SNMIGQGSFGYVYKGTLGEDE---MIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNLI 591
+ +IG+G FG VY GTL +++ + AVK +N + G F+ E +++ H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
++ IC ++ G+ V YM++G L++++ V L + + VA
Sbjct: 96 SLLGICLRSE--GSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 146
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
M++L VH DL N +LD V DFGLA+ + D + D+ + G K
Sbjct: 147 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV----HNKTGAK 199
Query: 712 GTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEF-AKTALPEKVMEIVDPSL 770
V ++A E S+ FT + V++ G L E + A P + D ++
Sbjct: 200 LPVKWMALE-------SLQTQKFTTK---SDVWSFGVLLWELMTRGAPPYPDVNTFDITV 249
Query: 771 LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRETFLG 830
++Q + ++ E C + + + C R ++V+++ TF+G
Sbjct: 250 Y--------LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 301
Query: 831 RR 832
Sbjct: 302 EH 303
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 132/302 (43%), Gaps = 39/302 (12%)
Query: 536 SNMIGQGSFGYVYKGTLGEDE---MIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNLI 591
+ +IG+G FG VY GTL +++ + AVK +N + G F+ E +++ H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
++ IC ++ G+ V YM++G L++++ V L + + VA
Sbjct: 93 SLLGICLRSE--GSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 143
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
M++L VH DL N +LD V DFGLA+ + D + D+ + G K
Sbjct: 144 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV----HNKTGAK 196
Query: 712 GTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEF-AKTALPEKVMEIVDPSL 770
V ++A E S+ FT + V++ G L E + A P + D ++
Sbjct: 197 LPVKWMALE-------SLQTQKFTTK---SDVWSFGVLLWELMTRGAPPYPDVNTFDITV 246
Query: 771 LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRETFLG 830
++Q + ++ E C + + + C R ++V+++ TF+G
Sbjct: 247 Y--------LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 298
Query: 831 RR 832
Sbjct: 299 EH 300
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 66/278 (23%), Positives = 122/278 (43%), Gaps = 49/278 (17%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGAS-RSFVAECEALRNIRHRNLIKIITIC 597
+G G FG V+ G VAVK +LK S +F+AE ++ ++H+ L+++ +
Sbjct: 21 LGAGQFGEVWMGYY-NGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + EYMENGSL D+L KL++ + +++A +A M ++
Sbjct: 78 TQEPI------YIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIE- 126
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+ +H DL+ +N+L+ + + DFGLA+ + D++ ++ G K + +
Sbjct: 127 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-------TAREGAKFPIKWT 177
Query: 718 APEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTN 777
APE ++ D+++ + + G I P MTN
Sbjct: 178 APEAINYGTFTIKSDVWSFGILLTEIVTHG----------------RIPYPG-----MTN 216
Query: 778 NSMIQEDKR----VKTEECLNAIIRTGVLCSMESPFER 811
+IQ +R V+ + C + + LC E P +R
Sbjct: 217 PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDR 254
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 66/278 (23%), Positives = 122/278 (43%), Gaps = 49/278 (17%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGAS-RSFVAECEALRNIRHRNLIKIITIC 597
+G G FG V+ G VAVK +LK S +F+AE ++ ++H+ L+++ +
Sbjct: 27 LGAGQFGEVWMGYY-NGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + EYMENGSL D+L KL++ + +++A +A M ++
Sbjct: 84 TQEPI------YIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIE- 132
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+ +H DL+ +N+L+ + + DFGLA+ + D++ ++ G K + +
Sbjct: 133 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-------TAREGAKFPIKWT 183
Query: 718 APEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTN 777
APE ++ D+++ + + G I P MTN
Sbjct: 184 APEAINYGTFTIKSDVWSFGILLTEIVTHG----------------RIPYPG-----MTN 222
Query: 778 NSMIQEDKR----VKTEECLNAIIRTGVLCSMESPFER 811
+IQ +R V+ + C + + LC E P +R
Sbjct: 223 PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDR 260
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 66/278 (23%), Positives = 122/278 (43%), Gaps = 49/278 (17%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGAS-RSFVAECEALRNIRHRNLIKIITIC 597
+G G FG V+ G VAVK +LK S +F+AE ++ ++H+ L+++ +
Sbjct: 22 LGAGQFGEVWMGYY-NGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 78
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + EYMENGSL D+L KL++ + +++A +A M ++
Sbjct: 79 TQEPI------YIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIE- 127
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+ +H DL+ +N+L+ + + DFGLA+ + D++ ++ G K + +
Sbjct: 128 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-------TAREGAKFPIKWT 178
Query: 718 APEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTN 777
APE ++ D+++ + + G I P MTN
Sbjct: 179 APEAINYGTFTIKSDVWSFGILLTEIVTHG----------------RIPYPG-----MTN 217
Query: 778 NSMIQEDKR----VKTEECLNAIIRTGVLCSMESPFER 811
+IQ +R V+ + C + + LC E P +R
Sbjct: 218 PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDR 255
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 66/278 (23%), Positives = 122/278 (43%), Gaps = 49/278 (17%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGAS-RSFVAECEALRNIRHRNLIKIITIC 597
+G G FG V+ G VAVK +LK S +F+AE ++ ++H+ L+++ +
Sbjct: 21 LGAGQFGEVWMGYY-NGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + EYMENGSL D+L KL++ + +++A +A M ++
Sbjct: 78 TQEPI------YIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIE- 126
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+ +H DL+ +N+L+ + + DFGLA+ + D++ ++ G K + +
Sbjct: 127 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-------TAREGAKFPIKWT 177
Query: 718 APEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTN 777
APE ++ D+++ + + G I P MTN
Sbjct: 178 APEAINYGTFTIKSDVWSFGILLTEIVTHG----------------RIPYPG-----MTN 216
Query: 778 NSMIQEDKR----VKTEECLNAIIRTGVLCSMESPFER 811
+IQ +R V+ + C + + LC E P +R
Sbjct: 217 PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDR 254
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 66/278 (23%), Positives = 122/278 (43%), Gaps = 49/278 (17%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGAS-RSFVAECEALRNIRHRNLIKIITIC 597
+G G FG V+ G VAVK +LK S +F+AE ++ ++H+ L+++ +
Sbjct: 16 LGAGQFGEVWMGYY-NGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 72
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + EYMENGSL D+L KL++ + +++A +A M ++
Sbjct: 73 TQEPI------YIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIE- 121
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+ +H DL+ +N+L+ + + DFGLA+ + D++ ++ G K + +
Sbjct: 122 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-------TAREGAKFPIKWT 172
Query: 718 APEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTN 777
APE ++ D+++ + + G I P MTN
Sbjct: 173 APEAINYGTFTIKSDVWSFGILLTEIVTHG----------------RIPYPG-----MTN 211
Query: 778 NSMIQEDKR----VKTEECLNAIIRTGVLCSMESPFER 811
+IQ +R V+ + C + + LC E P +R
Sbjct: 212 PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDR 249
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 66/278 (23%), Positives = 122/278 (43%), Gaps = 49/278 (17%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGAS-RSFVAECEALRNIRHRNLIKIITIC 597
+G G FG V+ G VAVK +LK S +F+AE ++ ++H+ L+++ +
Sbjct: 26 LGAGQFGEVWMGYY-NGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 82
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + EYMENGSL D+L KL++ + +++A +A M ++
Sbjct: 83 TQEPI------YIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIE- 131
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+ +H DL+ +N+L+ + + DFGLA+ + D++ ++ G K + +
Sbjct: 132 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-------TAREGAKFPIKWT 182
Query: 718 APEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTN 777
APE ++ D+++ + + G I P MTN
Sbjct: 183 APEAINYGTFTIKSDVWSFGILLTEIVTHG----------------RIPYPG-----MTN 221
Query: 778 NSMIQEDKR----VKTEECLNAIIRTGVLCSMESPFER 811
+IQ +R V+ + C + + LC E P +R
Sbjct: 222 PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDR 259
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 66/278 (23%), Positives = 122/278 (43%), Gaps = 49/278 (17%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGAS-RSFVAECEALRNIRHRNLIKIITIC 597
+G G FG V+ G VAVK +LK S +F+AE ++ ++H+ L+++ +
Sbjct: 23 LGAGQFGEVWMGYY-NGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 79
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + EYMENGSL D+L KL++ + +++A +A M ++
Sbjct: 80 TQEPI------YIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIE- 128
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+ +H DL+ +N+L+ + + DFGLA+ + D++ ++ G K + +
Sbjct: 129 --ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEX-------TAREGAKFPIKWT 179
Query: 718 APEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTN 777
APE ++ D+++ + + G I P MTN
Sbjct: 180 APEAINYGTFTIKSDVWSFGILLTEIVTHG----------------RIPYPG-----MTN 218
Query: 778 NSMIQEDKR----VKTEECLNAIIRTGVLCSMESPFER 811
+IQ +R V+ + C + + LC E P +R
Sbjct: 219 PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDR 256
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 8/159 (5%)
Query: 537 NMIGQGSFGYVYKGTLGEDE---MIVAVKVINLKYKGASR--SFVAECEALRNIRHRNLI 591
++G+G FG V +G L +++ + VAVK + L F++E +++ H N+I
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
+++ +C +G + +M+ G L +L S + + L + +D+A
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690
MEYL + +H DL N +L DM V DFGL+K
Sbjct: 160 MEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSK 195
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 132/302 (43%), Gaps = 39/302 (12%)
Query: 536 SNMIGQGSFGYVYKGTLGEDE---MIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNLI 591
+ +IG+G FG VY GTL +++ + AVK +N + G F+ E +++ H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
++ IC ++ G+ V YM++G L++++ V L + + VA
Sbjct: 96 SLLGICLRSE--GSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 146
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
M++L VH DL N +LD V DFGLA+ + D + D+ + G K
Sbjct: 147 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSV----HNKTGAK 199
Query: 712 GTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEF-AKTALPEKVMEIVDPSL 770
V ++A E S+ FT + V++ G L E + A P + D ++
Sbjct: 200 LPVKWMALE-------SLQTQKFTTK---SDVWSFGVLLWELMTRGAPPYPDVNTFDITV 249
Query: 771 LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRETFLG 830
++Q + ++ E C + + + C R ++V+++ TF+G
Sbjct: 250 Y--------LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 301
Query: 831 RR 832
Sbjct: 302 EH 303
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 127/306 (41%), Gaps = 44/306 (14%)
Query: 536 SNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNI-RHRNLI 591
++IG+G+FG V K + +D + + + +K K R F E E L + H N+I
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQS-----DDQVEVCK-----LSLIQR 641
++ C + +G + EY +G+L D+L +S D + LS Q
Sbjct: 87 NLLGAC---EHRG--YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 642 VNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA------------ 689
++ A DVA M+YL Q +H +L N+L+ + VA + DFGL+
Sbjct: 142 LHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 198
Query: 690 ----KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRP----ID 741
++++ L+ +V T +S + G + + G MT + P ++
Sbjct: 199 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLE 258
Query: 742 AVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGV 801
N +++ + EK E PS +++ N M++E K G+
Sbjct: 259 KPLNCDDEVYDLMRQCWREKPYE--RPSFAQILVSLNRMLEERKTYVNTTLYEKFTYAGI 316
Query: 802 LCSMES 807
CS E
Sbjct: 317 DCSAEE 322
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 107/221 (48%), Gaps = 29/221 (13%)
Query: 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMI---VAVKVINLKYKGASRSFVA----ECEALR 583
G + + +G G+FG K +G+ E+ VAVK++N + K S V E + L+
Sbjct: 16 GHYILGDTLGVGTFG---KVKVGKHELTGHKVAVKILN-RQKIRSLDVVGKIRREIQNLK 71
Query: 584 NIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVN 643
RH ++IK+ + S+ +D V EY+ G L D++ ++ E L Q++
Sbjct: 72 LFRHPHIIKLYQVISTP----SDI-FMVMEYVSGGELFDYICKNGRLDEKESRRLFQQI- 125
Query: 644 IAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQ-LDTAVK 702
S ++Y H H +VH DLKP NVLLD M A + DFGL+ +SD + L +
Sbjct: 126 -----LSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCG 177
Query: 703 TPSSSIG--LKGTVGYVAPEYGMGSEASMTGDIFTGRRPID 741
+P+ + + G + Y PE + S + + G P D
Sbjct: 178 SPNYAAPEVISGRL-YAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 104/237 (43%), Gaps = 48/237 (20%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL-KYKGAS------RSFVAECEA 581
A E IG+G FG V+KG L +D+ +VA+K + L +G + + F E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 582 LRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQR 641
+ N+ H N++K+ + + V E++ G L H+ D+ K S+ +
Sbjct: 77 MSNLNHPNIVKLYGLMHNP-------PRMVMEFVPCGDL---YHRLLDKAHPIKWSV--K 124
Query: 642 VNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLL-----DHDMVAHVCDFGLAKFLSDHQ 696
+ + +D+A +EY+ + PP+VH DL+ N+ L + + A V DF L++
Sbjct: 125 LRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ------ 177
Query: 697 LDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGD------------IFTGRRPID 741
++ S GL G ++APE E S T I TG P D
Sbjct: 178 -----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 131/300 (43%), Gaps = 39/300 (13%)
Query: 536 SNMIGQGSFGYVYKGTLGEDE---MIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNLI 591
+ +IG+G FG VY GTL +++ + AVK +N + G F+ E +++ H N++
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
++ IC ++ G+ V YM++G L++++ V L + + VA
Sbjct: 114 SLLGICLRSE--GSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 164
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
M+YL VH DL N +LD V DFGLA+ + D + + + G K
Sbjct: 165 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV----HNKTGAK 217
Query: 712 GTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEF-AKTALPEKVMEIVDPSL 770
V ++A E S+ FT + V++ G L E + A P + D ++
Sbjct: 218 LPVKWMALE-------SLQTQKFTTK---SDVWSFGVLLWELMTRGAPPYPDVNTFDITV 267
Query: 771 LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRETFLG 830
++Q + ++ E C + + + C R ++V+++ TF+G
Sbjct: 268 Y--------LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 319
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 131/300 (43%), Gaps = 39/300 (13%)
Query: 536 SNMIGQGSFGYVYKGTLGEDE---MIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNLI 591
+ +IG+G FG VY GTL +++ + AVK +N + G F+ E +++ H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
++ IC ++ G+ V YM++G L++++ V L + + VA
Sbjct: 94 SLLGICLRSE--GSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 144
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
M+YL VH DL N +LD V DFGLA+ + D + + + G K
Sbjct: 145 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSV----HNKTGAK 197
Query: 712 GTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEF-AKTALPEKVMEIVDPSL 770
V ++A E S+ FT + V++ G L E + A P + D ++
Sbjct: 198 LPVKWMALE-------SLQTQKFTTK---SDVWSFGVLLWELMTRGAPPYPDVNTFDITV 247
Query: 771 LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRETFLG 830
++Q + ++ E C + + + C R ++V+++ TF+G
Sbjct: 248 Y--------LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 299
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 131/300 (43%), Gaps = 39/300 (13%)
Query: 536 SNMIGQGSFGYVYKGTLGEDE---MIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNLI 591
+ +IG+G FG VY GTL +++ + AVK +N + G F+ E +++ H N++
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
++ IC ++ G+ V YM++G L++++ V L + + VA
Sbjct: 87 SLLGICLRSE--GSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 137
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
M+YL VH DL N +LD V DFGLA+ + D + + + G K
Sbjct: 138 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV----HNKTGAK 190
Query: 712 GTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEF-AKTALPEKVMEIVDPSL 770
V ++A E S+ FT + V++ G L E + A P + D ++
Sbjct: 191 LPVKWMALE-------SLQTQKFTTK---SDVWSFGVLLWELMTRGAPPYPDVNTFDITV 240
Query: 771 LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRETFLG 830
++Q + ++ E C + + + C R ++V+++ TF+G
Sbjct: 241 Y--------LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 292
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 131/300 (43%), Gaps = 39/300 (13%)
Query: 536 SNMIGQGSFGYVYKGTLGEDE---MIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNLI 591
+ +IG+G FG VY GTL +++ + AVK +N + G F+ E +++ H N++
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
++ IC ++ G+ V YM++G L++++ V L + + VA
Sbjct: 113 SLLGICLRSE--GSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 163
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
M+YL VH DL N +LD V DFGLA+ + D + + + G K
Sbjct: 164 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV----HNKTGAK 216
Query: 712 GTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEF-AKTALPEKVMEIVDPSL 770
V ++A E S+ FT + V++ G L E + A P + D ++
Sbjct: 217 LPVKWMALE-------SLQTQKFTTK---SDVWSFGVLLWELMTRGAPPYPDVNTFDITV 266
Query: 771 LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRETFLG 830
++Q + ++ E C + + + C R ++V+++ TF+G
Sbjct: 267 Y--------LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 318
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 44/221 (19%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-----GASRSFVAECEALRNIR 586
+ + +G+G F VYK IVA+K I L ++ G +R+ + E + L+ +
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVN--- 643
H N+I ++ F + VF++ME +D +V + SL+ +
Sbjct: 71 HPNIIGLLDA-----FGHKSNISLVFDFME----------TDLEVIIKDNSLVLTPSHIK 115
Query: 644 -IAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVK 702
+ +EYLH H ++H DLKP+N+LLD + V + DFGLAK +
Sbjct: 116 AYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAK---------SFG 163
Query: 703 TPSSSIGLK-GTVGYVAPE-------YGMGSEASMTGDIFT 735
+P+ + + T Y APE YG+G + G I
Sbjct: 164 SPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILA 204
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 66.2 bits (160), Expect = 8e-11, Method: Composition-based stats.
Identities = 65/278 (23%), Positives = 122/278 (43%), Gaps = 49/278 (17%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGAS-RSFVAECEALRNIRHRNLIKIITIC 597
+G G FG V+ G VAVK +LK S +F+AE ++ ++H+ L+++ +
Sbjct: 17 LGAGQFGEVWMGYY-NGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 73
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + EYMENGSL D+L KL++ + +++A +A M ++
Sbjct: 74 TQEPI------YIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIE- 122
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+ +H +L+ +N+L+ + + DFGLA+ + D++ ++ G K + +
Sbjct: 123 --ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEY-------TAREGAKFPIKWT 173
Query: 718 APEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTN 777
APE ++ D+++ + + G I P MTN
Sbjct: 174 APEAINYGTFTIKSDVWSFGILLTEIVTHG----------------RIPYPG-----MTN 212
Query: 778 NSMIQEDKR----VKTEECLNAIIRTGVLCSMESPFER 811
+IQ +R V+ + C + + LC E P +R
Sbjct: 213 PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDR 250
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 131/300 (43%), Gaps = 39/300 (13%)
Query: 536 SNMIGQGSFGYVYKGTLGEDE---MIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNLI 591
+ +IG+G FG VY GTL +++ + AVK +N + G F+ E +++ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
++ IC ++ G+ V YM++G L++++ V L + + VA
Sbjct: 95 SLLGICLRSE--GSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 145
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
M+YL VH DL N +LD V DFGLA+ + D + + + G K
Sbjct: 146 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV----HNKTGAK 198
Query: 712 GTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEF-AKTALPEKVMEIVDPSL 770
V ++A E S+ FT + V++ G L E + A P + D ++
Sbjct: 199 LPVKWMALE-------SLQTQKFTTK---SDVWSFGVLLWELMTRGAPPYPDVNTFDITV 248
Query: 771 LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRETFLG 830
++Q + ++ E C + + + C R ++V+++ TF+G
Sbjct: 249 Y--------LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 300
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 131/302 (43%), Gaps = 39/302 (12%)
Query: 536 SNMIGQGSFGYVYKGTLGEDE---MIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNLI 591
+ +IG+G FG VY GTL +++ + AVK +N + G F+ E +++ H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
++ IC ++ G+ V YM++G L++++ V L + + VA
Sbjct: 93 SLLGICLRSE--GSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 143
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
M+YL VH DL N +LD V DFGLA+ + D + + + G K
Sbjct: 144 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV----HNKTGAK 196
Query: 712 GTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEF-AKTALPEKVMEIVDPSL 770
V ++A E S+ FT + V++ G L E + A P + D ++
Sbjct: 197 LPVKWMALE-------SLQTQKFTTK---SDVWSFGVLLWELMTRGAPPYPDVNTFDITV 246
Query: 771 LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRETFLG 830
++Q + ++ E C + + + C R ++V+++ TF+G
Sbjct: 247 Y--------LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 298
Query: 831 RR 832
Sbjct: 299 EH 300
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 119/278 (42%), Gaps = 49/278 (17%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGAS-RSFVAECEALRNIRHRNLIKIITIC 597
+G G G V+ G VAVK +LK S +F+AE ++ ++H+ L+++ +
Sbjct: 21 LGAGQAGEVWMGYYN-GHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + EYMENGSL D+L KL++ + +++A +A M ++
Sbjct: 78 TQEPI------YIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEE 127
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+H DL+ +N+L+ + + DFGLA+ + D + ++ G K + +
Sbjct: 128 RN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEX-------TAREGAKFPIKWT 177
Query: 718 APEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTN 777
APE ++ D+++ + + G I P MTN
Sbjct: 178 APEAINYGTFTIKSDVWSFGILLTEIVTHGR----------------IPYPG-----MTN 216
Query: 778 NSMIQEDKR----VKTEECLNAIIRTGVLCSMESPFER 811
+IQ +R V+ + C + + LC E P +R
Sbjct: 217 PEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDR 254
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 131/300 (43%), Gaps = 39/300 (13%)
Query: 536 SNMIGQGSFGYVYKGTLGEDE---MIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNLI 591
+ +IG+G FG VY GTL +++ + AVK +N + G F+ E +++ H N++
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
++ IC ++ G+ V YM++G L++++ V L + + VA
Sbjct: 92 SLLGICLRSE--GSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 142
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
M+YL VH DL N +LD V DFGLA+ + D + + + G K
Sbjct: 143 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV----HNKTGAK 195
Query: 712 GTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEF-AKTALPEKVMEIVDPSL 770
V ++A E S+ FT + V++ G L E + A P + D ++
Sbjct: 196 LPVKWMALE-------SLQTQKFTTK---SDVWSFGVLLWELMTRGAPPYPDVNTFDITV 245
Query: 771 LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRETFLG 830
++Q + ++ E C + + + C R ++V+++ TF+G
Sbjct: 246 Y--------LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 297
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 131/302 (43%), Gaps = 39/302 (12%)
Query: 536 SNMIGQGSFGYVYKGTLGEDE---MIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNLI 591
+ +IG+G FG VY GTL +++ + AVK +N + G F+ E +++ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
++ IC ++ G+ V YM++G L++++ V L + + VA
Sbjct: 95 SLLGICLRSE--GSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 145
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
M+YL VH DL N +LD V DFGLA+ + D + + + G K
Sbjct: 146 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV----HNKTGAK 198
Query: 712 GTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEF-AKTALPEKVMEIVDPSL 770
V ++A E S+ FT + V++ G L E + A P + D ++
Sbjct: 199 LPVKWMALE-------SLQTQKFTTK---SDVWSFGVLLWELMTRGAPPYPDVNTFDITV 248
Query: 771 LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRETFLG 830
++Q + ++ E C + + + C R ++V+++ TF+G
Sbjct: 249 Y--------LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 300
Query: 831 RR 832
Sbjct: 301 EH 302
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 131/302 (43%), Gaps = 39/302 (12%)
Query: 536 SNMIGQGSFGYVYKGTLGEDE---MIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNLI 591
+ +IG+G FG VY GTL +++ + AVK +N + G F+ E +++ H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
++ IC ++ G+ V YM++G L++++ V L + + VA
Sbjct: 94 SLLGICLRSE--GSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 144
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
M+YL VH DL N +LD V DFGLA+ + D + + + G K
Sbjct: 145 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV----HNKTGAK 197
Query: 712 GTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEF-AKTALPEKVMEIVDPSL 770
V ++A E S+ FT + V++ G L E + A P + D ++
Sbjct: 198 LPVKWMALE-------SLQTQKFTTK---SDVWSFGVLLWELMTRGAPPYPDVNTFDITV 247
Query: 771 LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRETFLG 830
++Q + ++ E C + + + C R ++V+++ TF+G
Sbjct: 248 Y--------LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 299
Query: 831 RR 832
Sbjct: 300 EH 301
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 131/302 (43%), Gaps = 39/302 (12%)
Query: 536 SNMIGQGSFGYVYKGTLGEDE---MIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNLI 591
+ +IG+G FG VY GTL +++ + AVK +N + G F+ E +++ H N++
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
++ IC ++ G+ V YM++G L++++ V L + + VA
Sbjct: 90 SLLGICLRSE--GSPL--VVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 140
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
M+YL VH DL N +LD V DFGLA+ + D + + + G K
Sbjct: 141 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV----HNKTGAK 193
Query: 712 GTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEF-AKTALPEKVMEIVDPSL 770
V ++A E S+ FT + V++ G L E + A P + D ++
Sbjct: 194 LPVKWMALE-------SLQTQKFTTK---SDVWSFGVLLWELMTRGAPPYPDVNTFDITV 243
Query: 771 LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRETFLG 830
++Q + ++ E C + + + C R ++V+++ TF+G
Sbjct: 244 Y--------LLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 295
Query: 831 RR 832
Sbjct: 296 EH 297
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 81/187 (43%), Gaps = 23/187 (12%)
Query: 539 IGQGSFG----YVYKGTLGEDEMIVAVKVINLKYKGASRS-FVAECEALRNIRHRNLIKI 593
+G+G FG Y Y T +VAVK + RS + E + LR + H ++IK
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 594 ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAME 653
C G V EY+ GSL+D+L + + L Q + A + M
Sbjct: 99 KGCCEDA---GAASLQLVMEYVPLGSLRDYLPRHS-------IGLAQLLLFAQQICEGMA 148
Query: 654 YLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGT 713
YLH +H DL NVLLD+D + + DFGLAK + + V+ S
Sbjct: 149 YLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDS-----P 200
Query: 714 VGYVAPE 720
V + APE
Sbjct: 201 VFWYAPE 207
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 90/193 (46%), Gaps = 26/193 (13%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK---YKGASRSFVAECEAL-RNIRH 587
+F +IG+GSFG V +E+ AVKV+ K K + ++E L +N++H
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAID 647
L+ + F+ D FV +Y+ G L L Q E C L R A +
Sbjct: 99 PFLVGL-----HFSFQTADKLYFVLDYINGGELFYHL-----QRERCFLEPRARF-YAAE 147
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
+ASA+ YLH +V+ DLKP N+LLD + DFGL K +H S++
Sbjct: 148 IASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN--------STT 196
Query: 708 IGLKGTVGYVAPE 720
GT Y+APE
Sbjct: 197 STFCGTPEYLAPE 209
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 100/225 (44%), Gaps = 36/225 (16%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK--YK-GASRSFVAECEALRNIRHR 588
+F N++G+GSF VY+ + VA+K+I+ K YK G + E + ++H
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
+++++ F+ +++ V E NG + +L + V S + + +
Sbjct: 72 SILELYNY-----FEDSNYVYLVLEMCHNGEMNRYL-----KNRVKPFSENEARHFMHQI 121
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP-SSS 707
+ M YLH H ++H DL SN+LL +M + DFGLA T +K P
Sbjct: 122 ITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLA---------TQLKMPHEKH 169
Query: 708 IGLKGTVGYVAPEYGMGSEASMTGDIFT----------GRRPIDA 742
L GT Y++PE S + D+++ GR P D
Sbjct: 170 YTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDT 214
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 109/270 (40%), Gaps = 71/270 (26%)
Query: 527 SKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFV-AECEALRNI 585
S+ +F +G+G FG V++ D+ A+K I L + +R V E +AL +
Sbjct: 2 SRYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL 61
Query: 586 RHRNLIKIITIC-------------------SSTDF------------------------ 602
H +++ STD+
Sbjct: 62 EHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTK 121
Query: 603 ------KGTDFKAFVFEYME---NGSLKDWLHQ----SDDQVEVCKLSLIQRVNIAIDVA 649
+ + K +++ M+ +LKDW+++ D + VC ++I I +A
Sbjct: 122 NTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVC-------LHIFIQIA 174
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP----S 705
A+E+LH ++H DLKPSN+ D V V DFGL + + + V TP +
Sbjct: 175 EAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 231
Query: 706 SSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
+ G GT Y++PE G+ S DIF+
Sbjct: 232 THXGQVGTKLYMSPEQIHGNNYSHKVDIFS 261
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 38/209 (18%)
Query: 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVI------NLKYKGASRSFVAECEALRNIRHRNL 590
IG+G+FG V+ G L D +VAVK +LK K F+ E L+ H N+
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK-----FLQEARILKQYSHPNI 174
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVAS 650
+++I +C+ K + V E ++ G +L ++ V +L+Q V D A+
Sbjct: 175 VRLIGVCTQ---KQPIY--IVMELVQGGDFLTFLRTEGARLRV--KTLLQMVG---DAAA 224
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
MEYL C +H DL N L+ V + DFG+++ + A ++S GL
Sbjct: 225 GMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR-------EEADGVXAASGGL 274
Query: 711 KGT-VGYVAPE---YGMGSEASMTGDIFT 735
+ V + APE YG S S D+++
Sbjct: 275 RQVPVKWTAPEALNYGRYSSES---DVWS 300
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 119/259 (45%), Gaps = 35/259 (13%)
Query: 539 IGQGSFGYVYKGTL-GEDEMIVAVKVINLKYKGASRSFVAECEALRNI--RHRNLIKIIT 595
+G+G +G V++G+ GE+ VAVK+ + + +S+ E E + RH N++ I
Sbjct: 45 VGKGRYGEVWRGSWQGEN---VAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIA 98
Query: 596 ICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYL 655
++ T + Y E GSL D+L ++ L + + I + +AS + +L
Sbjct: 99 SDMTSRHSSTQL-WLITHYHEMGSLYDYL-------QLTTLDTVSCLRIVLSIASGLAHL 150
Query: 656 H-----HHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSD--HQLDTAVKTPSSSI 708
H +P + H DLK N+L+ + + D GLA S +QLD P
Sbjct: 151 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVG-NNPRV-- 207
Query: 709 GLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDP 768
GT Y+APE + ++ D F + +D ++ G L E A+ + ++E P
Sbjct: 208 ---GTKRYMAPEV---LDETIQVDCFDSYKRVD-IWAFGLVLWEVARRMVSNGIVEDYKP 260
Query: 769 SLLMEVMTNNSMIQEDKRV 787
+V+ N+ ++ ++V
Sbjct: 261 P-FYDVVPNDPSFEDMRKV 278
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 28/185 (15%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRS---FVAECEALRNIRHRNLIKIIT 595
+G G FG V+ T + VAVK + K S S F+AE ++ ++H L+K+
Sbjct: 196 LGAGQFGEVWMATYNK-HTKVAVKTM----KPGSMSVEAFLAEANVMKTLQHDKLVKLHA 250
Query: 596 ICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYL 655
+ + + E+M GSL D+L +SD E K L + ++ + +A M ++
Sbjct: 251 VVTKEPI------YIITEFMAKGSLLDFL-KSD---EGSKQPLPKLIDFSAQIAEGMAFI 300
Query: 656 HHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVG 715
Q +H DL+ +N+L+ +V + DFGLA+ + D++ ++ G K +
Sbjct: 301 E---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY-------TAREGAKFPIK 350
Query: 716 YVAPE 720
+ APE
Sbjct: 351 WTAPE 355
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 81/164 (49%), Gaps = 20/164 (12%)
Query: 539 IGQGSFGYV-----YKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKI 593
+G+G+FG V Y +D+++VAVK + A + F E E L N++H +++K
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 594 ITICSSTDFKGTDFKAFVFEYMENGSLKDWLH-QSDDQVEVC------KLSLIQRVNIAI 646
+C D VFEYM++G L +L D V + +L+ Q ++IA
Sbjct: 81 YGVCVE-----GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQ 135
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690
+A+ M YL VH DL N L+ +++ + DFG+++
Sbjct: 136 QIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR 176
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 38/209 (18%)
Query: 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVI------NLKYKGASRSFVAECEALRNIRHRNL 590
IG+G+FG V+ G L D +VAVK +LK K F+ E L+ H N+
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAK-----FLQEARILKQYSHPNI 174
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVAS 650
+++I +C+ K + V E ++ G +L ++ V +L+Q V D A+
Sbjct: 175 VRLIGVCTQ---KQPIY--IVMELVQGGDFLTFLRTEGARLRV--KTLLQMVG---DAAA 224
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
MEYL C +H DL N L+ V + DFG+++ + A ++S GL
Sbjct: 225 GMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR-------EEADGVYAASGGL 274
Query: 711 KGT-VGYVAPE---YGMGSEASMTGDIFT 735
+ V + APE YG S S D+++
Sbjct: 275 RQVPVKWTAPEALNYGRYSSES---DVWS 300
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 131/300 (43%), Gaps = 51/300 (17%)
Query: 539 IGQGSFGYVYKGTLG-----EDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKI 593
+G+G+FG V+ +D+M+VAVK + + A + F E E L ++H+++++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 594 ITICSSTDFKGTDFKAFVFEYMENGSLKDWL--HQSD-------DQVEVCKLSLIQRVNI 644
+C+ +G VFEYM +G L +L H D + V L L Q + +
Sbjct: 109 FGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 163
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A VA+ M YL VH DL N L+ +V + DFG+++ + T
Sbjct: 164 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI--------YSTD 212
Query: 705 SSSIGLKGT--VGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEG-HSLHEFAKTALPEK 761
+G + + ++ PE + + + D+++ + +F G ++ + T
Sbjct: 213 YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT----- 267
Query: 762 VMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKL 821
E +D +T ++ + E + AI+R C P +R ++DV A+L
Sbjct: 268 --EAID------CITQGRELERPRACPPE--VYAIMRG---CWQREPQQRHSIKDVHARL 314
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 22/182 (12%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+G G FG V+ T + VAVK + + +F+AE ++ ++H L+K+ + +
Sbjct: 23 LGAGQFGEVWMATYNKHTK-VAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 80
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
+ E+M GSL D+L +SD E K L + ++ + +A M ++
Sbjct: 81 KEPI------YIITEFMAKGSLLDFL-KSD---EGSKQPLPKLIDFSAQIAEGMAFIE-- 128
Query: 659 CQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVA 718
Q +H DL+ +N+L+ +V + DFGLA+ + D++ ++ G K + + A
Sbjct: 129 -QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY-------TAREGAKFPIKWTA 180
Query: 719 PE 720
PE
Sbjct: 181 PE 182
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 119/259 (45%), Gaps = 35/259 (13%)
Query: 539 IGQGSFGYVYKGTL-GEDEMIVAVKVINLKYKGASRSFVAECEALRNI--RHRNLIKIIT 595
+G+G +G V++G+ GE+ VAVK+ + + +S+ E E + RH N++ I
Sbjct: 16 VGKGRYGEVWRGSWQGEN---VAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIA 69
Query: 596 ICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYL 655
++ T + Y E GSL D+L ++ L + + I + +AS + +L
Sbjct: 70 SDMTSRHSSTQL-WLITHYHEMGSLYDYL-------QLTTLDTVSCLRIVLSIASGLAHL 121
Query: 656 H-----HHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSD--HQLDTAVKTPSSSI 708
H +P + H DLK N+L+ + + D GLA S +QLD P
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVG-NNPRV-- 178
Query: 709 GLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDP 768
GT Y+APE + ++ D F + +D ++ G L E A+ + ++E P
Sbjct: 179 ---GTKRYMAPEV---LDETIQVDCFDSYKRVD-IWAFGLVLWEVARRMVSNGIVEDYKP 231
Query: 769 SLLMEVMTNNSMIQEDKRV 787
+V+ N+ ++ ++V
Sbjct: 232 PFY-DVVPNDPSFEDMRKV 249
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 119/259 (45%), Gaps = 35/259 (13%)
Query: 539 IGQGSFGYVYKGTL-GEDEMIVAVKVINLKYKGASRSFVAECEALRNI--RHRNLIKIIT 595
+G+G +G V++G+ GE+ VAVK+ + + +S+ E E + RH N++ I
Sbjct: 16 VGKGRYGEVWRGSWQGEN---VAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIA 69
Query: 596 ICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYL 655
++ T + Y E GSL D+L ++ L + + I + +AS + +L
Sbjct: 70 SDMTSRHSSTQL-WLITHYHEMGSLYDYL-------QLTTLDTVSCLRIVLSIASGLAHL 121
Query: 656 H-----HHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSD--HQLDTAVKTPSSSI 708
H +P + H DLK N+L+ + + D GLA S +QLD P
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVG-NNPRV-- 178
Query: 709 GLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDP 768
GT Y+APE + ++ D F + +D ++ G L E A+ + ++E P
Sbjct: 179 ---GTKRYMAPEV---LDETIQVDCFDSYKRVD-IWAFGLVLWEVARRMVSNGIVEDYKP 231
Query: 769 SLLMEVMTNNSMIQEDKRV 787
+V+ N+ ++ ++V
Sbjct: 232 PFY-DVVPNDPSFEDMRKV 249
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 26/188 (13%)
Query: 511 TSPMEKQFPMVSYAELSKATGEFSSSNMIGQGSFGYVYKGTL---GEDEMI-VAVKVINL 566
T+P + Q ++ EL + ++G G+FG VYKG GE I VA+K++N
Sbjct: 25 TAPNQAQLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNE 77
Query: 567 KY-KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH 625
A+ F+ E + ++ H +L++++ +C S + V + M +G L +++H
Sbjct: 78 TTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ------LVTQLMPHGCLLEYVH 131
Query: 626 QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685
+ D + L +N + +A M YL +VH DL NVL+ + D
Sbjct: 132 EHKDNIGSQLL-----LNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITD 183
Query: 686 FGLAKFLS 693
FGLA+ L
Sbjct: 184 FGLARLLE 191
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 132/303 (43%), Gaps = 57/303 (18%)
Query: 539 IGQGSFGYVYKGTLG-----EDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKI 593
+G+G+FG V+ +D+M+VAVK + + A + F E E L ++H+++++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 594 ITICSSTDFKGTDFKAFVFEYMENGSLKDWL--HQSD-------DQVEVCKLSLIQRVNI 644
+C+ +G VFEYM +G L +L H D + V L L Q + +
Sbjct: 86 FGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 140
Query: 645 AIDVASAMEY---LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV 701
A VA+ M Y LH VH DL N L+ +V + DFG+++ +
Sbjct: 141 ASQVAAGMVYLAGLH------FVHRDLATRNCLVGQGLVVKIGDFGMSRDI--------Y 186
Query: 702 KTPSSSIGLKGT--VGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEG-HSLHEFAKTAL 758
T +G + + ++ PE + + + D+++ + +F G ++ + T
Sbjct: 187 STDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT-- 244
Query: 759 PEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVV 818
E +D +T ++ + E + AI+R C P +R ++DV
Sbjct: 245 -----EAID------CITQGRELERPRACPPE--VYAIMRG---CWQREPQQRHSIKDVH 288
Query: 819 AKL 821
A+L
Sbjct: 289 ARL 291
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 131/300 (43%), Gaps = 51/300 (17%)
Query: 539 IGQGSFGYVYKGTLG-----EDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKI 593
+G+G+FG V+ +D+M+VAVK + + A + F E E L ++H+++++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 594 ITICSSTDFKGTDFKAFVFEYMENGSLKDWL--HQSD-------DQVEVCKLSLIQRVNI 644
+C+ +G VFEYM +G L +L H D + V L L Q + +
Sbjct: 80 FGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 134
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A VA+ M YL VH DL N L+ +V + DFG+++ + T
Sbjct: 135 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI--------YSTD 183
Query: 705 SSSIGLKGT--VGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEG-HSLHEFAKTALPEK 761
+G + + ++ PE + + + D+++ + +F G ++ + T
Sbjct: 184 YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT----- 238
Query: 762 VMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKL 821
E +D +T ++ + E + AI+R C P +R ++DV A+L
Sbjct: 239 --EAID------CITQGRELERPRACPPE--VYAIMRG---CWQREPQQRHSIKDVHARL 285
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 107/242 (44%), Gaps = 40/242 (16%)
Query: 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG--ASRSFVAECEALRNIRH 587
+ +F +++G+G++G V T IVA+K I K A R+ + E + L++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-LREIKILKHFKH 68
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQ-------SDDQVEVCKLSLIQ 640
N+I I I F+ + + E M+ LH+ SDD ++ ++
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVISTQMLSDDHIQYFIYQTLR 123
Query: 641 RVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTA 700
V + LH ++H DLKPSN+L++ + VCDFGLA+ + + D +
Sbjct: 124 AVKV----------LHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS 170
Query: 701 VKTPSSS--IGLKGTVGYVAPEYGMGS-EASMTGDIFTG---------RRPIDAVFNEGH 748
T S + T Y APE + S + S D+++ RRPI + H
Sbjct: 171 EPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH 230
Query: 749 SL 750
L
Sbjct: 231 QL 232
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 82/187 (43%), Gaps = 23/187 (12%)
Query: 539 IGQGSFG----YVYKGTLGEDEMIVAVKVINLKYKGASRS-FVAECEALRNIRHRNLIKI 593
+G+G FG Y Y T +VAVK + RS + E + LR + H ++IK
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 594 ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAME 653
C +G V EY+ GSL+D+L + + L Q + A + M
Sbjct: 82 KGCCED---QGEKSLQLVMEYVPLGSLRDYLPRHS-------IGLAQLLLFAQQICEGMA 131
Query: 654 YLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGT 713
YLH +H +L NVLLD+D + + DFGLAK + + V+ S
Sbjct: 132 YLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDS-----P 183
Query: 714 VGYVAPE 720
V + APE
Sbjct: 184 VFWYAPE 190
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 82/187 (43%), Gaps = 23/187 (12%)
Query: 539 IGQGSFG----YVYKGTLGEDEMIVAVKVINLKYKGASRS-FVAECEALRNIRHRNLIKI 593
+G+G FG Y Y T +VAVK + RS + E + LR + H ++IK
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 594 ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAME 653
C +G V EY+ GSL+D+L + + L Q + A + M
Sbjct: 82 KGCCED---QGEKSLQLVMEYVPLGSLRDYLPRHS-------IGLAQLLLFAQQICEGMA 131
Query: 654 YLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGT 713
YLH +H +L NVLLD+D + + DFGLAK + + V+ S
Sbjct: 132 YLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDS-----P 183
Query: 714 VGYVAPE 720
V + APE
Sbjct: 184 VFWYAPE 190
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 92/212 (43%), Gaps = 40/212 (18%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
F+ IG+GSFG V+KG + +VA+K+I+L+ + I
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLE-----------EAEDEIEDIQQEIT 77
Query: 593 IITICSS---TDFKGTDFK----AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIA 645
+++ C S T + G+ K + EY+ GS D L E L Q I
Sbjct: 78 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-------EPGPLDETQIATIL 130
Query: 646 IDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQL--DTAVKT 703
++ ++YLH + +H D+K +NVLL + DFG+A L+D Q+ +T V T
Sbjct: 131 REILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGT 187
Query: 704 PSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
P ++APE S DI++
Sbjct: 188 PF----------WMAPEVIKQSAYDSKADIWS 209
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 28/194 (14%)
Query: 539 IGQGSFGYVYKGTL-----GEDEMIVAVKVINLKYKGASR-SFVAECEALRNIRHRNLIK 592
+GQGSFG VY+G GE E VAVK +N R F+ E ++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVE----VCKLSLIQRVNIAIDV 648
++ + S KG V E M +G LK +L + E +L + + +A ++
Sbjct: 85 LLGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
A M YL+ VH DL N ++ HD + DFG+ + + + T
Sbjct: 140 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE--------TDXXRK 188
Query: 709 GLKG--TVGYVAPE 720
G KG V ++APE
Sbjct: 189 GGKGLLPVRWMAPE 202
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 26/188 (13%)
Query: 511 TSPMEKQFPMVSYAELSKATGEFSSSNMIGQGSFGYVYKGTL---GEDEMI-VAVKVINL 566
T+P + Q ++ EL + ++G G+FG VYKG GE I VA+K++N
Sbjct: 2 TAPNQAQLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNE 54
Query: 567 KY-KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH 625
A+ F+ E + ++ H +L++++ +C S + V + M +G L +++H
Sbjct: 55 TTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ------LVTQLMPHGCLLEYVH 108
Query: 626 QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685
+ D + L +N + +A M YL +VH DL NVL+ + D
Sbjct: 109 EHKDNIGSQLL-----LNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITD 160
Query: 686 FGLAKFLS 693
FGLA+ L
Sbjct: 161 FGLARLLE 168
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 28/194 (14%)
Query: 539 IGQGSFGYVYKGTL-----GEDEMIVAVKVINLKYKGASR-SFVAECEALRNIRHRNLIK 592
+GQGSFG VY+G GE E VAVK +N R F+ E ++ ++++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVE----VCKLSLIQRVNIAIDV 648
++ + S KG V E M +G LK +L + E +L + + +A ++
Sbjct: 82 LLGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 136
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
A M YL+ VH DL N ++ HD + DFG+ + + + T
Sbjct: 137 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE--------TDXXRK 185
Query: 709 GLKG--TVGYVAPE 720
G KG V ++APE
Sbjct: 186 GGKGLLPVRWMAPE 199
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 32/211 (15%)
Query: 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG--ASRSFVAECEALRNIRH 587
+ +F +++G+G++G V T IVA+K I K A R+ + E + L++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-LREIKILKHFKH 68
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQ-------SDDQVEVCKLSLIQ 640
N+I I I F+ + + E M+ LH+ SDD ++ ++
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVISTQMLSDDHIQYFIYQTLR 123
Query: 641 RVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTA 700
V + LH ++H DLKPSN+L++ + VCDFGLA+ + + D +
Sbjct: 124 AVKV----------LHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS 170
Query: 701 VKTPSSSIGLKGTVGYVAPEYGMGSEASMTG 731
T S G YVA + E +T
Sbjct: 171 EPTGQQS----GMTEYVATRWYRAPEVMLTS 197
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 28/194 (14%)
Query: 539 IGQGSFGYVYKGTL-----GEDEMIVAVKVINLKYKGASR-SFVAECEALRNIRHRNLIK 592
+GQGSFG VY+G GE E VAVK +N R F+ E ++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVE----VCKLSLIQRVNIAIDV 648
++ + S KG V E M +G LK +L + E +L + + +A ++
Sbjct: 85 LLGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
A M YL+ VH DL N ++ HD + DFG+ + + + T
Sbjct: 140 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE--------TDXXRK 188
Query: 709 GLKG--TVGYVAPE 720
G KG V ++APE
Sbjct: 189 GGKGLLPVRWMAPE 202
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 24/213 (11%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK--YKGASRSFVAECEALRNIR 586
AT + IG G++G VYK VA+K + + +G S V E LR +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 587 ---HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVN 643
H N+++++ +C+++ VFE+++ L+ +L D+ L +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL----DKAPPPGLPAETIKD 116
Query: 644 IAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLS-DHQLDTAVK 702
+ +++LH +C +VH DLKP N+L+ + DFGLA+ S LD V
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV 173
Query: 703 TPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
T+ Y APE + S + D+++
Sbjct: 174 ----------TLWYRAPEVLLQSTYATPVDMWS 196
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 40/212 (18%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
F+ IG+GSFG V+KG + +VA+K+I+L+ + + I
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI-----------QQEIT 57
Query: 593 IITICSS---TDFKGTDFK----AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIA 645
+++ C S T + G+ K + EY+ GS D L E L Q I
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-------EPGPLDETQIATIL 110
Query: 646 IDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQL--DTAVKT 703
++ ++YLH + +H D+K +NVLL + DFG+A L+D Q+ +T V T
Sbjct: 111 REILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGT 167
Query: 704 PSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
P ++APE S DI++
Sbjct: 168 PF----------WMAPEVIKQSAYDSKADIWS 189
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 90/182 (49%), Gaps = 21/182 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+G G FG V+ G + VAVK + + ++F+ E ++ ++H L+++ + +
Sbjct: 21 LGAGQFGEVWMGYYN-NSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
+ + EYM GSL D+L +SD E K+ L + ++ + +A M Y+
Sbjct: 79 REEPI-----YIITEYMAKGSLLDFL-KSD---EGGKVLLPKLIDFSAQIAEGMAYIERK 129
Query: 659 CQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVA 718
+H DL+ +NVL+ ++ + DFGLA+ + D++ ++ G K + + A
Sbjct: 130 N---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY-------TAREGAKFPIKWTA 179
Query: 719 PE 720
PE
Sbjct: 180 PE 181
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 23/207 (11%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVA-ECEALRNIRHR 588
+F ++G+GSF V A+K++ ++ K +V E + + + H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
+K+ F+ + F Y +NG L ++ + E C R A ++
Sbjct: 93 FFVKLYFT-----FQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETC-----TRFYTA-EI 141
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS +
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS----- 193
Query: 709 GLKGTVGYVAPEYGMGSEASMTGDIFT 735
GT YV+PE AS + D++
Sbjct: 194 -FVGTAQYVSPELLTEKSASKSSDLWA 219
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK--YKGASRSFVAECEALRNIR 586
AT + IG G++G VYK VA+K + + +G S V E LR +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 587 ---HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVN 643
H N+++++ +C+++ VFE+++ L+ +L D+ L +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL----DKAPPPGLPAETIKD 116
Query: 644 IAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKT 703
+ +++LH +C +VH DLKP N+L+ + DFGLA+ S +Q+ A
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS-YQMALA--- 169
Query: 704 PSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
+ T+ Y APE + S + D+++
Sbjct: 170 -----PVVVTLWYRAPEVLLQSTYATPVDMWS 196
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 36/210 (17%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
F+ IG+GSFG V+KG + +VA+K+I+L+ + + I
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI-----------QQEIT 72
Query: 593 IITICSS---TDFKGTDFK----AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIA 645
+++ C S T + G+ K + EY+ GS D L E L Q I
Sbjct: 73 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-------EPGPLDETQIATIL 125
Query: 646 IDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPS 705
++ ++YLH + +H D+K +NVLL + DFG+A L+D Q+
Sbjct: 126 REILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX---- 178
Query: 706 SSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
GT ++APE S DI++
Sbjct: 179 ----FVGTPFWMAPEVIKQSAYDSKADIWS 204
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 36/210 (17%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
F+ IG+GSFG V+KG + +VA+K+I+L+ + + I
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI-----------QQEIT 57
Query: 593 IITICSS---TDFKGTDFK----AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIA 645
+++ C S T + G+ K + EY+ GS D L E L Q I
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-------EPGPLDETQIATIL 110
Query: 646 IDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPS 705
++ ++YLH + +H D+K +NVLL + DFG+A L+D Q+
Sbjct: 111 REILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX---- 163
Query: 706 SSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
GT ++APE S DI++
Sbjct: 164 ----FVGTPFWMAPEVIKQSAYDSKADIWS 189
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 89/194 (45%), Gaps = 28/194 (14%)
Query: 539 IGQGSFGYVYKGTL-----GEDEMIVAVKVINLKYKGASR-SFVAECEALRNIRHRNLIK 592
+GQGSFG VY+G GE E VAVK +N R F+ E ++ ++++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVE----VCKLSLIQRVNIAIDV 648
++ + S KG V E M +G LK +L + E +L + + +A ++
Sbjct: 84 LLGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 138
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
A M YL+ VH DL N ++ HD + DFG+ + + ++ D K
Sbjct: 139 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI--YETDYYRK------ 187
Query: 709 GLKG--TVGYVAPE 720
G KG V ++APE
Sbjct: 188 GGKGLLPVRWMAPE 201
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 30/218 (13%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRN 589
++ +G+G++G VYK + IVA+K I L + +G + + E L+ + H N
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQGR-IVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 590 LIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
++ +I + S VFE+ME LK L ++ + +Q I I +
Sbjct: 81 IVSLIDVIHSERCL-----TLVFEFMEK-DLKKVLDENK--------TGLQDSQIKIYLY 126
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H Q ++H DLKP N+L++ D + DFGLA+ V++ + +
Sbjct: 127 QLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFG-----IPVRSYTHEV- 180
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFTGRRPIDAVFNE 746
T+ Y AP+ MGS+ T DI++ I +F E
Sbjct: 181 --VTLWYRAPDVLMGSKKYSTSVDIWS----IGCIFAE 212
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 30/218 (13%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRN 589
++ +G+G++G VYK + IVA+K I L + +G + + E L+ + H N
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQGR-IVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 590 LIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
++ +I + S VFE+ME LK L ++ + +Q I I +
Sbjct: 81 IVSLIDVIHSERCL-----TLVFEFMEK-DLKKVLDENK--------TGLQDSQIKIYLY 126
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H Q ++H DLKP N+L++ D + DFGLA+ V++ + +
Sbjct: 127 QLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFG-----IPVRSYTHEV- 180
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFTGRRPIDAVFNE 746
T+ Y AP+ MGS+ T DI++ I +F E
Sbjct: 181 --VTLWYRAPDVLMGSKKYSTSVDIWS----IGCIFAE 212
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 89/194 (45%), Gaps = 28/194 (14%)
Query: 539 IGQGSFGYVYKGTL-----GEDEMIVAVKVINLKYKGASR-SFVAECEALRNIRHRNLIK 592
+GQGSFG VY+G GE E VAVK +N R F+ E ++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVE----VCKLSLIQRVNIAIDV 648
++ + S KG V E M +G LK +L + E +L + + +A ++
Sbjct: 85 LLGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
A M YL+ VH DL N ++ HD + DFG+ + + ++ D K
Sbjct: 140 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI--YETDYYRK------ 188
Query: 709 GLKG--TVGYVAPE 720
G KG V ++APE
Sbjct: 189 GGKGLLPVRWMAPE 202
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 28/194 (14%)
Query: 539 IGQGSFGYVYKGTL-----GEDEMIVAVKVINLKYKGASR-SFVAECEALRNIRHRNLIK 592
+GQGSFG VY+G GE E VAVK +N R F+ E ++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVE----VCKLSLIQRVNIAIDV 648
++ + S KG V E M +G LK +L + E +L + + +A ++
Sbjct: 85 LLGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
A M YL+ VH DL N ++ HD + DFG+ + + + T
Sbjct: 140 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE--------TAYYRK 188
Query: 709 GLKG--TVGYVAPE 720
G KG V ++APE
Sbjct: 189 GGKGLLPVRWMAPE 202
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 108/243 (44%), Gaps = 42/243 (17%)
Query: 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG--ASRSFVAECEALRNIRH 587
+ +F +++G+G++G V T IVA+K I K A R+ + E + L++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-LREIKILKHFKH 68
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQ-------SDDQVEVCKLSLIQ 640
N+I I I F+ + + E M+ LH+ SDD ++ ++
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVISTQMLSDDHIQYFIYQTLR 123
Query: 641 RVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTA 700
V + LH ++H DLKPSN+L++ + VCDFGLA+ + + D +
Sbjct: 124 AVKV----------LHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS 170
Query: 701 VKTPSSSIGLK---GTVGYVAPEYGMGS-EASMTGDIFTG---------RRPIDAVFNEG 747
T S G+ T Y APE + S + S D+++ RRPI +
Sbjct: 171 EPTGQQS-GMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR 229
Query: 748 HSL 750
H L
Sbjct: 230 HQL 232
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 90/182 (49%), Gaps = 21/182 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+G G FG V+ G + VAVK + + ++F+ E ++ ++H L+++ + +
Sbjct: 20 LGAGQFGEVWMGYYN-NSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
+ + E+M GSL D+L +SD E K+ L + ++ + +A M Y+
Sbjct: 78 KEEPI-----YIITEFMAKGSLLDFL-KSD---EGGKVLLPKLIDFSAQIAEGMAYIERK 128
Query: 659 CQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVA 718
+H DL+ +NVL+ ++ + DFGLA+ + D++ ++ G K + + A
Sbjct: 129 N---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY-------TAREGAKFPIKWTA 178
Query: 719 PE 720
PE
Sbjct: 179 PE 180
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 23/212 (10%)
Query: 527 SKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVA-ECEALR 583
K +F ++G+GSF V A+K++ ++ K +V E + +
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 65
Query: 584 NIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVN 643
+ H +K+ F+ + F Y +NG L ++ + E C R
Sbjct: 66 RLDHPFFVKLYFT-----FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFY 115
Query: 644 IAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKT 703
A ++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS
Sbjct: 116 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ----- 166
Query: 704 PSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
+ + GT YV+PE A + D++
Sbjct: 167 -ARANXFVGTAQYVSPELLTEKSACKSSDLWA 197
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 22/212 (10%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK--YKGASRSFVAECEALRNIR 586
AT + IG G++G VYK VA+K + + +G S V E LR +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 587 ---HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVN 643
H N+++++ +C+++ VFE+++ L+ +L D+ L +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL----DKAPPPGLPAETIKD 116
Query: 644 IAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKT 703
+ +++LH +C +VH DLKP N+L+ + DFGLA+ S +Q+
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS-YQM------ 166
Query: 704 PSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
+ + T+ Y APE + S + D+++
Sbjct: 167 --ALFPVVVTLWYRAPEVLLQSTYATPVDMWS 196
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 9/165 (5%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDE---MIVAVKVINLKYKGAS--RSFVAECEALRNIR 586
+F+ M+G+G FG V + L +++ + VAVK++ +S F+ E ++
Sbjct: 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFD 83
Query: 587 HRNLIKIITICSSTDFKGT-DFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIA 645
H ++ K++ + + KG + +M++G L +L S L L V
Sbjct: 84 HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFM 143
Query: 646 IDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690
+D+A MEYL +H DL N +L DM V DFGL++
Sbjct: 144 VDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSR 185
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 36/210 (17%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
F+ + IG+GSFG VYKG + +VA+K+I+L+ + + I
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQE-----------IT 69
Query: 593 IITICSS---TDFKGTDFKA----FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIA 645
+++ C S T + G+ K+ + EY+ GS D L +E ++ I R
Sbjct: 70 VLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPG--PLEETYIATILR---- 123
Query: 646 IDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPS 705
++ ++YLH + +H D+K +NVLL + DFG+A L+D Q+
Sbjct: 124 -EILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNX---- 175
Query: 706 SSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
GT ++APE S DI++
Sbjct: 176 ----FVGTPFWMAPEVIKQSAYDFKADIWS 201
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 23/212 (10%)
Query: 527 SKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVA-ECEALR 583
K +F ++G+GSF V A+K++ ++ K +V E + +
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 62
Query: 584 NIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVN 643
+ H +K+ F+ + F Y +NG L ++ + E C R
Sbjct: 63 RLDHPFFVKLYFT-----FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFY 112
Query: 644 IAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKT 703
A ++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS
Sbjct: 113 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES------K 162
Query: 704 PSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
+ + GT YV+PE A + D++
Sbjct: 163 QARANXFVGTAQYVSPELLTEKSACKSSDLWA 194
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 25/217 (11%)
Query: 527 SKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASR-----SFVAECEA 581
S AT + IG G++G VYK VA+K + + G S V E
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 582 LRNIR---HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSL 638
LR + H N+++++ +C+++ VFE+++ L+ +L D+ L
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL----DKAPPPGLPA 119
Query: 639 IQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLD 698
++ +++LH +C +VH DLKP N+L+ + DFGLA+ S
Sbjct: 120 ETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL 176
Query: 699 TAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
T V T+ Y APE + S + D+++
Sbjct: 177 TPVVV---------TLWYRAPEVLLQSTYATPVDMWS 204
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 23/212 (10%)
Query: 527 SKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVA-ECEALR 583
K +F ++G+GSF V A+K++ ++ K +V E + +
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63
Query: 584 NIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVN 643
+ H +K+ F+ + F Y +NG L ++ + E C R
Sbjct: 64 RLDHPFFVKLYFT-----FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFY 113
Query: 644 IAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKT 703
A ++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS
Sbjct: 114 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES------K 163
Query: 704 PSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
+ + GT YV+PE A + D++
Sbjct: 164 QARANXFVGTAQYVSPELLTEKSACKSSDLWA 195
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 23/212 (10%)
Query: 527 SKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVA-ECEALR 583
K +F ++G+GSF V A+K++ ++ K +V E + +
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 64
Query: 584 NIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVN 643
+ H +K+ F+ + F Y +NG L ++ + E C R
Sbjct: 65 RLDHPFFVKLYFT-----FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFY 114
Query: 644 IAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKT 703
A ++ SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS
Sbjct: 115 TA-EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES------K 164
Query: 704 PSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
+ + GT YV+PE A + D++
Sbjct: 165 QARANXFVGTAQYVSPELLTEKSACKSSDLWA 196
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 106/230 (46%), Gaps = 27/230 (11%)
Query: 528 KATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI--NLKYKGASRSFVAECEALRNI 585
++ ++ + ++G+GS+G V K + IVA+K + K + + E + L+ +
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDW-LHQSDDQVEVCKLSLIQRVNI 644
RH NL+ ++ +C K VFE++++ L D L + +V + L Q +N
Sbjct: 82 RHENLVNLLEVC-----KKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIIN- 135
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSD----HQLDTA 700
+ + H H ++H D+KP N+L+ V +CDFG A+ L+ + + A
Sbjct: 136 ------GIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA 186
Query: 701 VKTPSSSIGLKGTVGY--VAPEYGMG---SEASMTGDIFTGRRPIDAVFN 745
+ + L G V Y + +G +E M +F G ID +++
Sbjct: 187 TRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYH 236
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 89/207 (42%), Gaps = 23/207 (11%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVA-ECEALRNIRHR 588
+F ++G+GSF V A+K++ ++ K +V E + + + H
Sbjct: 38 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 97
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
+K+ C D K F Y +NG L ++ + E C R A ++
Sbjct: 98 FFVKLY-FCFQDDEK----LYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA-EI 146
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS + +
Sbjct: 147 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES------KQARAN 197
Query: 709 GLKGTVGYVAPEYGMGSEASMTGDIFT 735
GT YV+PE A + D++
Sbjct: 198 XFVGTAQYVSPELLTEKSACKSSDLWA 224
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 23/207 (11%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVA-ECEALRNIRHR 588
+F ++G+GSF V A+K++ ++ K +V E + + + H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
+K+ F+ + F Y +NG L ++ + E C R A ++
Sbjct: 91 FFVKLYFT-----FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA-EI 139
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS + +
Sbjct: 140 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES------KQARAN 190
Query: 709 GLKGTVGYVAPEYGMGSEASMTGDIFT 735
GT YV+PE A + D++
Sbjct: 191 AFVGTAQYVSPELLTEKSACKSSDLWA 217
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 88/207 (42%), Gaps = 23/207 (11%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVA-ECEALRNIRHR 588
+F ++G+GSF V A+K++ ++ K +V E + + + H
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
+K+ F+ + F Y +NG L ++ + E C R A ++
Sbjct: 94 FFVKLYFT-----FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA-EI 142
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS +
Sbjct: 143 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS----- 194
Query: 709 GLKGTVGYVAPEYGMGSEASMTGDIFT 735
GT YV+PE A + D++
Sbjct: 195 -FVGTAQYVSPELLTEKSACKSSDLWA 220
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 34/194 (17%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNI--RHRNLIKIITI 596
IG+G +G V+ G ++ VAVKV + S+ E E + + RH N++ I
Sbjct: 45 IGKGRYGEVWMGKWRGEK--VAVKVF---FTTEEASWFRETEIYQTVLMRHENILGFI-- 97
Query: 597 CSSTDFKGTDFKAFVF---EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAME 653
+ D KGT ++ +Y ENGSL D+L + L + +A S +
Sbjct: 98 --AADIKGTGSWTQLYLITDYHENGSLYDYLKST-------TLDAKSMLKLAYSSVSGLC 148
Query: 654 YLHHHC-----QPPMVHGDLKPSNVLLDHDMVAHVCDFGLA-KFLSD-HQLDTAVKTPSS 706
+LH +P + H DLK N+L+ + + D GLA KF+SD +++D P++
Sbjct: 149 HLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIP---PNT 205
Query: 707 SIGLKGTVGYVAPE 720
+G K Y+ PE
Sbjct: 206 RVGTK---RYMPPE 216
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 87/202 (43%), Gaps = 23/202 (11%)
Query: 539 IGQGSFG----YVYKGTLGEDEMIVAVKVINLKYKGASRS-FVAECEALRNIRHRNLIKI 593
+G+G FG Y Y T +VAVK + RS + E E LR + H +++K
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 594 ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAME 653
C +G V EY+ GSL+D+L + C + L Q + A + M
Sbjct: 76 KGCCED---QGEKSVQLVMEYVPLGSLRDYLPRH------C-VGLAQLLLFAQQICEGMA 125
Query: 654 YLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGT 713
YLH +H L NVLLD+D + + DFGLAK + + V+ S
Sbjct: 126 YLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDS-----P 177
Query: 714 VGYVAPEYGMGSEASMTGDIFT 735
V + APE + D+++
Sbjct: 178 VFWYAPECLKECKFYYASDVWS 199
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 90/212 (42%), Gaps = 40/212 (18%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
F+ IG+GSFG V+KG + +VA+K+I+L E + I
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDL-----------EEAEDEIEDIQQEIT 73
Query: 593 IITICSS---TDFKGTDFKA----FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIA 645
+++ C S T + G+ K + EY+ GS D L Q +
Sbjct: 74 VLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLR-------AGPFDEFQIATML 126
Query: 646 IDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQL--DTAVKT 703
++ ++YLH + +H D+K +NVLL + DFG+A L+D Q+ +T V T
Sbjct: 127 KEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGT 183
Query: 704 PSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
P ++APE S DI++
Sbjct: 184 PF----------WMAPEVIQQSAYDSKADIWS 205
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+K I L + +G + + E L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ LKD++ S + L LI+ + +
Sbjct: 65 VKLLDVIH------TENKLYLVFEFLHQ-DLKDFMDAS--ALTGIPLPLIK--SYLFQLL 113
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T +
Sbjct: 114 QGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEV- 164
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 165 --VTLWYRAPEILLGCKYYSTAVDIWS 189
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 23/207 (11%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVA-ECEALRNIRHR 588
+F ++G+GSF V A+K++ ++ K +V E + + + H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
+K+ F+ + F Y +NG L ++ + E C R A ++
Sbjct: 93 FFVKLYFT-----FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA-EI 141
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS + +
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES------KQARAN 192
Query: 709 GLKGTVGYVAPEYGMGSEASMTGDIFT 735
GT YV+PE A + D++
Sbjct: 193 XFVGTAQYVSPELLTEKSAXKSSDLWA 219
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 87/202 (43%), Gaps = 23/202 (11%)
Query: 539 IGQGSFG----YVYKGTLGEDEMIVAVKVINLKYKGASRS-FVAECEALRNIRHRNLIKI 593
+G+G FG Y Y T +VAVK + RS + E E LR + H +++K
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 594 ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAME 653
C +G V EY+ GSL+D+L + C + L Q + A + M
Sbjct: 77 KGCCED---QGEKSVQLVMEYVPLGSLRDYLPRH------C-VGLAQLLLFAQQICEGMA 126
Query: 654 YLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGT 713
YLH +H L NVLLD+D + + DFGLAK + + V+ S
Sbjct: 127 YLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDS-----P 178
Query: 714 VGYVAPEYGMGSEASMTGDIFT 735
V + APE + D+++
Sbjct: 179 VFWYAPECLKECKFYYASDVWS 200
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 135/294 (45%), Gaps = 53/294 (18%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLI 591
+F + +G G+ G V+K + +++A K+I+L+ K A R+ + IR +
Sbjct: 10 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI--------IRE---L 58
Query: 592 KIITICSS---TDFKGTDFK----AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNI 644
+++ C+S F G + + E+M+ GSL L ++ E ++ +V+I
Sbjct: 59 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVSI 114
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A V + YL + ++H D+KPSN+L++ +CDFG++ L D + V
Sbjct: 115 A--VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFV--- 167
Query: 705 SSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVME 764
GT Y++PE G+ S+ DI++ G SL E A P M
Sbjct: 168 -------GTRSYMSPERLQGTHYSVQSDIWS----------MGLSLVEMAVGRYPRPPMA 210
Query: 765 IVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVV 818
I + L++ + N + V + E + + + C +++P ER D++ ++
Sbjct: 211 IFE---LLDYIVNEPPPKLPSAVFSLEFQDFVNK----CLIKNPAERADLKQLM 257
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 87/207 (42%), Gaps = 23/207 (11%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVA-ECEALRNIRHR 588
+F ++G+GSF V A+K++ ++ K +V E + + + H
Sbjct: 36 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 95
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
+K+ F+ + F Y +NG L ++ + E C R A ++
Sbjct: 96 FFVKLYFT-----FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA-EI 144
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS
Sbjct: 145 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX----- 196
Query: 709 GLKGTVGYVAPEYGMGSEASMTGDIFT 735
GT YV+PE A + D++
Sbjct: 197 -FVGTAQYVSPELLTEKSACKSSDLWA 222
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 87/207 (42%), Gaps = 23/207 (11%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVA-ECEALRNIRHR 588
+F ++G+GSF V A+K++ ++ K +V E + + + H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
+K+ F+ + F Y +NG L ++ + E C R A ++
Sbjct: 93 FFVKLYFT-----FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA-EI 141
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX----- 193
Query: 709 GLKGTVGYVAPEYGMGSEASMTGDIFT 735
GT YV+PE A + D++
Sbjct: 194 -FVGTAQYVSPELLTEKSACKSSDLWA 219
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 23/207 (11%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVA-ECEALRNIRHR 588
+F ++G+GSF V A+K++ ++ K +V E + + + H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
+K+ F+ + F Y +NG L ++ + E C R A ++
Sbjct: 91 FFVKLYFT-----FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA-EI 139
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS + +
Sbjct: 140 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES------KQARAN 190
Query: 709 GLKGTVGYVAPEYGMGSEASMTGDIFT 735
GT YV+PE A + D++
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWA 217
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 23/207 (11%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVA-ECEALRNIRHR 588
+F ++G+GSF V A+K++ ++ K +V E + + + H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
+K+ F+ + F Y +NG L ++ + E C R A ++
Sbjct: 91 FFVKLYFT-----FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA-EI 139
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS + +
Sbjct: 140 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES------KQARAN 190
Query: 709 GLKGTVGYVAPEYGMGSEASMTGDIFT 735
GT YV+PE A + D++
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWA 217
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 23/207 (11%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVA-ECEALRNIRHR 588
+F ++G+GSF V A+K++ ++ K +V E + + + H
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
+K+ F+ + F Y +NG L ++ + E C R A ++
Sbjct: 90 FFVKLYFT-----FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA-EI 138
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS + +
Sbjct: 139 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES------KQARAN 189
Query: 709 GLKGTVGYVAPEYGMGSEASMTGDIFT 735
GT YV+PE A + D++
Sbjct: 190 SFVGTAQYVSPELLTEKSACKSSDLWA 216
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 87/207 (42%), Gaps = 23/207 (11%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVA-ECEALRNIRHR 588
+F ++G+GSF V A+K++ ++ K +V E + + + H
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
+K+ F+ + F Y +NG L ++ + E C R A ++
Sbjct: 94 FFVKLYFT-----FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA-EI 142
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS
Sbjct: 143 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX----- 194
Query: 709 GLKGTVGYVAPEYGMGSEASMTGDIFT 735
GT YV+PE A + D++
Sbjct: 195 -FVGTAQYVSPELLTEKSACKSSDLWA 220
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 23/207 (11%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVA-ECEALRNIRHR 588
+F ++G+GSF V A+K++ ++ K +V E + + + H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
+K+ F+ + F Y +NG L ++ + E C R A ++
Sbjct: 93 FFVKLYFT-----FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA-EI 141
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS + +
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES------KQARAN 192
Query: 709 GLKGTVGYVAPEYGMGSEASMTGDIFT 735
GT YV+PE A + D++
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWA 219
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 23/207 (11%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVA-ECEALRNIRHR 588
+F ++G+GSF V A+K++ ++ K +V E + + + H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
+K+ F+ + F Y +NG L ++ + E C R A ++
Sbjct: 93 FFVKLYFT-----FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA-EI 141
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS + +
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES------KQARAN 192
Query: 709 GLKGTVGYVAPEYGMGSEASMTGDIFT 735
GT YV+PE A + D++
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWA 219
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 37/195 (18%)
Query: 540 GQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRN--IRHRNLIKIITIC 597
+G FG V+K L D VAVK+ L+ K +S+ +E E ++H NL++ I
Sbjct: 24 ARGRFGCVWKAQLMND--FVAVKIFPLQDK---QSWQSEREIFSTPGMKHENLLQFI--- 75
Query: 598 SSTDFKGTDFKAFVF---EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
+ + +G++ + ++ + + GSL D+L + ++ + ++A ++ + Y
Sbjct: 76 -AAEKRGSNLEVELWLITAFHDKGSLTDYLKGN-------IITWNELCHVAETMSRGLSY 127
Query: 655 LHHHC--------QPPMVHGDLKPSNVLLDHDMVAHVCDFGLA-KFLSDHQLDTAVKTPS 705
LH +P + H D K NVLL D+ A + DFGLA +F K P
Sbjct: 128 LHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRF-------EPGKPPG 180
Query: 706 SSIGLKGTVGYVAPE 720
+ G GT Y+APE
Sbjct: 181 DTHGQVGTRRYMAPE 195
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 23/207 (11%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVA-ECEALRNIRHR 588
+F ++G+GSF V A+K++ ++ K +V E + + + H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
+K+ F+ + F Y +NG L ++ + E C R A ++
Sbjct: 93 FFVKLYFT-----FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA-EI 141
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS + +
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES------KQARAN 192
Query: 709 GLKGTVGYVAPEYGMGSEASMTGDIFT 735
GT YV+PE A + D++
Sbjct: 193 XFVGTAQYVSPELLTEKSACKSSDLWA 219
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 89/194 (45%), Gaps = 28/194 (14%)
Query: 539 IGQGSFGYVYKGTL-----GEDEMIVAVKVINLKYKGASR-SFVAECEALRNIRHRNLIK 592
+GQGSFG VY+G GE E VAVK +N R F+ E ++ ++++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVE----VCKLSLIQRVNIAIDV 648
++ + S KG V E M +G LK +L + E +L + + +A ++
Sbjct: 86 LLGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 140
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
A M YL+ VH +L N ++ HD + DFG+ + + ++ D K
Sbjct: 141 ADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDI--YETDYYRK------ 189
Query: 709 GLKG--TVGYVAPE 720
G KG V ++APE
Sbjct: 190 GGKGLLPVRWMAPE 203
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+K I L + +G + + E L+ + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ + LKD++ S + L LI+ + +
Sbjct: 68 VKLLDVIH------TENKLYLVFEFL-SMDLKDFMDAS--ALTGIPLPLIK--SYLFQLL 116
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T +
Sbjct: 117 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEV- 167
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 168 --VTLWYRAPEILLGCKYYSTAVDIWS 192
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 89/194 (45%), Gaps = 28/194 (14%)
Query: 539 IGQGSFGYVYKGTL-----GEDEMIVAVKVINLKYKGASR-SFVAECEALRNIRHRNLIK 592
+GQGSFG VY+G GE E VAVK +N R F+ E ++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVE----VCKLSLIQRVNIAIDV 648
++ + S KG V E M +G LK +L + E +L + + +A ++
Sbjct: 85 LLGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
A M YL+ VH +L N ++ HD + DFG+ + + ++ D K
Sbjct: 140 ADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDI--YETDYYRK------ 188
Query: 709 GLKG--TVGYVAPE 720
G KG V ++APE
Sbjct: 189 GGKGLLPVRWMAPE 202
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 23/207 (11%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVA-ECEALRNIRHR 588
+F ++G+GSF V A+K++ ++ K +V E + + + H
Sbjct: 15 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 74
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
+K+ F+ + F Y +NG L ++ + E C R A ++
Sbjct: 75 FFVKLYFT-----FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA-EI 123
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS + +
Sbjct: 124 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES------KQARAN 174
Query: 709 GLKGTVGYVAPEYGMGSEASMTGDIFT 735
GT YV+PE A + D++
Sbjct: 175 XFVGTAQYVSPELLTEKSACKSSDLWA 201
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+K I L + +G + + E L+ + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ + LKD++ S + L LI+ + +
Sbjct: 67 VKLLDVIH------TENKLYLVFEFL-SMDLKDFMDAS--ALTGIPLPLIK--SYLFQLL 115
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T +
Sbjct: 116 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEV- 166
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 167 --VTLWYRAPEILLGCKYYSTAVDIWS 191
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 94/202 (46%), Gaps = 27/202 (13%)
Query: 520 MVSYAELSKATGEFSSSNMIGQGSFGYVYKGT-LGEDEMI---VAVKVINLKYKGASRSF 575
M A + K T E ++G G FG V+KG + E E I V +KVI + K +SF
Sbjct: 3 MKVLARIFKET-ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVI--EDKSGRQSF 59
Query: 576 VAECE---ALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVE 632
A + A+ ++ H ++++++ +C + + V +Y+ GSL D + Q +
Sbjct: 60 QAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ------LVTQYLPLGSLLDHVRQHRGALG 113
Query: 633 VCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL 692
L +N + +A M YL H MVH +L NVLL V DFG+A L
Sbjct: 114 PQLL-----LNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLL 165
Query: 693 --SDHQ-LDTAVKTPSSSIGLK 711
D Q L + KTP + L+
Sbjct: 166 PPDDKQLLYSEAKTPIKWMALE 187
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 35/217 (16%)
Query: 539 IGQGSFGYVY-KGTLGEDE----MIVAVKVINLKYKGASRSF---VAECEALRNI-RHRN 589
+G+G+FG V +G D+ + V V LK + ++E E ++ I +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 590 LIKIITICSSTDFKGTDFKAFVF-EYMENGSLKDWLH-QSDDQVEVC---------KLSL 638
+I ++ C+ D +V EY G+L+++L + +E C +LS
Sbjct: 81 IINLLGACTQ------DGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSS 134
Query: 639 IQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLD 698
V+ A VA MEYL +H DL NVL+ D V + DFGLA+ + H +D
Sbjct: 135 KDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI--HHID 189
Query: 699 TAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
KT + + +K ++APE + D+++
Sbjct: 190 YYKKTTNGRLPVK----WMAPEALFDRIYTHQSDVWS 222
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 32/192 (16%)
Query: 540 GQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSS 599
+G FG V+K L + VAVK+ ++ K + ++ E +L ++H N+++ I
Sbjct: 33 ARGRFGCVWKAQLLNE--YVAVKIFPIQDKQSWQNEY-EVYSLPGMKHENILQFI----G 85
Query: 600 TDFKGTDFKA---FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLH 656
+ +GT + + E GSL D+L + +S + +IA +A + YLH
Sbjct: 86 AEKRGTSVDVDLWLITAFHEKGSLSDFLKAN-------VVSWNELCHIAETMARGLAYLH 138
Query: 657 HHC-------QPPMVHGDLKPSNVLLDHDMVAHVCDFGLA-KFLSDHQLDTAVKTPSSSI 708
+P + H D+K NVLL +++ A + DFGLA KF A K+ +
Sbjct: 139 EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKF-------EAGKSAGDTH 191
Query: 709 GLKGTVGYVAPE 720
G GT Y+APE
Sbjct: 192 GQVGTRRYMAPE 203
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 93/198 (46%), Gaps = 27/198 (13%)
Query: 524 AELSKATGEFSSSNMIGQGSFGYVYKGT-LGEDEMI---VAVKVINLKYKGASRSFVAEC 579
A + K T E ++G G FG V+KG + E E I V +KVI + K +SF A
Sbjct: 25 ARIFKET-ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVI--EDKSGRQSFQAVT 81
Query: 580 E---ALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKL 636
+ A+ ++ H ++++++ +C + + V +Y+ GSL D + Q + L
Sbjct: 82 DHMLAIGSLDHAHIVRLLGLCPGSSLQ------LVTQYLPLGSLLDHVRQHRGALGPQLL 135
Query: 637 SLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL--SD 694
+N + +A M YL H MVH +L NVLL V DFG+A L D
Sbjct: 136 -----LNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 187
Query: 695 HQ-LDTAVKTPSSSIGLK 711
Q L + KTP + L+
Sbjct: 188 KQLLYSEAKTPIKWMALE 205
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 35/202 (17%)
Query: 539 IGQGSFGYVYKG-TLGEDE----MIVAVKVINLKYKGASRSF---VAECEALRNI-RHRN 589
+G+G+FG V +G D+ + V V LK + ++E E ++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 590 LIKIITICSSTDFKGTDFKAFVF-EYMENGSLKDWLH-QSDDQVEVC---------KLSL 638
+I ++ C+ D +V EY G+L+++L + +E C +LS
Sbjct: 96 IINLLGACTQ------DGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSS 149
Query: 639 IQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLD 698
V+ A VA MEYL +H DL NVL+ D V + DFGLA+ + H +D
Sbjct: 150 KDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI--HHID 204
Query: 699 TAVKTPSSSIGLKGTVGYVAPE 720
KT + + +K ++APE
Sbjct: 205 YYKKTTNGRLPVK----WMAPE 222
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 23/207 (11%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVA-ECEALRNIRHR 588
+F ++G+GSF V A+K++ ++ K +V E + + + H
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
+K+ F+ + F Y +NG L ++ + E C R A ++
Sbjct: 90 FFVKLYFT-----FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA-EI 138
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS + +
Sbjct: 139 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES------KQARAN 189
Query: 709 GLKGTVGYVAPEYGMGSEASMTGDIFT 735
GT YV+PE A + D++
Sbjct: 190 XFVGTAQYVSPELLTEKSACKSSDLWA 216
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 90/205 (43%), Gaps = 30/205 (14%)
Query: 537 NMIGQGSFGYVYKGTLGEDEMI---VAVKVINLKYKGAS---RSFVAECEALRNIRHRNL 590
+ +G G VY L ED ++ VA+K I + + + F E + H+N+
Sbjct: 17 DKLGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNI 73
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVAS 650
+ +I + D V EY+E +L +++ LS+ +N +
Sbjct: 74 VSMIDVDEEDDCY-----YLVMEYIEGPTLSEYIESH------GPLSVDTAINFTNQILD 122
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
+++ H +VH D+KP N+L+D + + DFG+AK LS+ L + + +
Sbjct: 123 GIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL-------TQTNHV 172
Query: 711 KGTVGYVAPEYGMGSEASMTGDIFT 735
GTV Y +PE G DI++
Sbjct: 173 LGTVQYFSPEQAKGEATDECTDIYS 197
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+K I L + +G + + E L+ + H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ LK ++ S + L LI+ + +
Sbjct: 72 VKLLDVIH------TENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIK--SYLFQLL 120
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T + +
Sbjct: 121 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYTHEV- 171
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 172 --VTLWYRAPEILLGXKYYSTAVDIWS 196
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 46/226 (20%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLI 591
+F + +G G+ G V K +I+A K+I+L+ K A R+ + IR +
Sbjct: 17 DFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQI--------IRE---L 65
Query: 592 KIITICSS---TDFKGTDFK----AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNI 644
+++ C+S F G + + E+M+ GSL L ++ E ++ +V+I
Sbjct: 66 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPE----EILGKVSI 121
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A V + YL Q ++H D+KPSN+L++ +CDFG++ L D ++ V
Sbjct: 122 A--VLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV--- 174
Query: 705 SSSIGLKGTVGYVAPEYGMGSEASMTGDIFT----------GRRPI 740
GT Y+APE G+ S+ DI++ GR PI
Sbjct: 175 -------GTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 32/196 (16%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLI 591
+FS +IG+G FG VY + + A+K ++ K R + + E L + R ++
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK-----RIKMKQGETL-ALNERIML 242
Query: 592 KIIT-------ICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNI 644
+++ +C S F D +F+ + M G L H S V S
Sbjct: 243 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLH--YHLSQHGV----FSEADMRFY 296
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A ++ +E++H+ +V+ DLKP+N+LLD + D GLA D + K P
Sbjct: 297 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-------CDFSKKKP 346
Query: 705 SSSIGLKGTVGYVAPE 720
+S+ GT GY+APE
Sbjct: 347 HASV---GTHGYMAPE 359
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 32/196 (16%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLI 591
+FS +IG+G FG VY + + A+K ++ K R + + E L + R ++
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK-----RIKMKQGETL-ALNERIML 243
Query: 592 KIIT-------ICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNI 644
+++ +C S F D +F+ + M G L H S V S
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLH--YHLSQHGV----FSEADMRFY 297
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A ++ +E++H+ +V+ DLKP+N+LLD + D GLA D + K P
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-------CDFSKKKP 347
Query: 705 SSSIGLKGTVGYVAPE 720
+S+ GT GY+APE
Sbjct: 348 HASV---GTHGYMAPE 360
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+K I L + +G + + E L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ LK ++ S + L LI+ + +
Sbjct: 65 VKLLDVIH------TENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIK--SYLFQLL 113
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T + +
Sbjct: 114 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYTHEV- 164
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 165 --VTLWYRAPEILLGXKYYSTAVDIWS 189
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 88/195 (45%), Gaps = 32/195 (16%)
Query: 538 MIGQGSFGYVYKGTLGEDEMIVAVKVIN---LKYKGASRSFVAECEALRNIRHRNLIKII 594
M+G+GSFG V K + AVKVIN K K S + + E E L+ + H N++K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTS-TILREVELLKKLDHPNIMKLF 87
Query: 595 TICS-STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAME 653
I S+ F V E G L D + ++ + S I V S +
Sbjct: 88 EILEDSSSF------YIVGELYTGGELFDEI------IKRKRFSEHDAARIIKQVFSGIT 135
Query: 654 YLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
Y+H H +VH DLKP N+LL + D + DFGL+ Q +T +K
Sbjct: 136 YMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRI----- 184
Query: 711 KGTVGYVAPEYGMGS 725
GT Y+APE G+
Sbjct: 185 -GTAYYIAPEVLRGT 198
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 23/216 (10%)
Query: 526 LSKATGEFSSSNMIGQGSFGYVYKGT-LGEDEMIVAVKVINLKY--KGASRSFVAECEAL 582
L +A ++ IG+G++G V+K L VA+K + ++ +G S + E L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 583 RNIR---HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLI 639
R++ H N++++ +C+ + VFE+++ L +L D+V +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL----DKVPEPGVPTE 120
Query: 640 QRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDT 699
++ + +++LH H +VH DLKP N+L+ + DFGLA+ S T
Sbjct: 121 TIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALT 177
Query: 700 AVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
+V T+ Y APE + S + D+++
Sbjct: 178 SVVV---------TLWYRAPEVLLQSSYATPVDLWS 204
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 85/185 (45%), Gaps = 38/185 (20%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRS---FVAECEALRNIRHRNLIKIIT 595
+G G FG V+ T + VAVK + K S S F+AE ++ ++H L+K+
Sbjct: 190 LGAGQFGEVWMATYNK-HTKVAVKTM----KPGSMSVEAFLAEANVMKTLQHDKLVKLHA 244
Query: 596 ICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYL 655
+ + + E+M GSL D+L +SD E K L + ++ + +A M ++
Sbjct: 245 VVTKEPI------YIITEFMAKGSLLDFL-KSD---EGSKQPLPKLIDFSAQIAEGMAFI 294
Query: 656 HHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVG 715
Q +H DL+ +N+L+ +V + DFGLA+ +G K +
Sbjct: 295 E---QRNYIHRDLRAANILVSASLVCKIADFGLAR-----------------VGAKFPIK 334
Query: 716 YVAPE 720
+ APE
Sbjct: 335 WTAPE 339
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 32/196 (16%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLI 591
+FS +IG+G FG VY + + A+K ++ K R + + E L + R ++
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK-----RIKMKQGETL-ALNERIML 243
Query: 592 KIIT-------ICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNI 644
+++ +C S F D +F+ + M G L H S V S
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLH--YHLSQHGV----FSEADMRFY 297
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A ++ +E++H+ +V+ DLKP+N+LLD + D GLA D + K P
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-------CDFSKKKP 347
Query: 705 SSSIGLKGTVGYVAPE 720
+S+ GT GY+APE
Sbjct: 348 HASV---GTHGYMAPE 360
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 32/196 (16%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLI 591
+FS +IG+G FG VY + + A+K ++ K R + + E L + R ++
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK-----RIKMKQGETL-ALNERIML 243
Query: 592 KIIT-------ICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNI 644
+++ +C S F D +F+ + M G L H S V S
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLH--YHLSQHGV----FSEADMRFY 297
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A ++ +E++H+ +V+ DLKP+N+LLD + D GLA D + K P
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-------CDFSKKKP 347
Query: 705 SSSIGLKGTVGYVAPE 720
+S+ GT GY+APE
Sbjct: 348 HASV---GTHGYMAPE 360
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 18/176 (10%)
Query: 525 ELSKATGEFSSSNMIGQGSFGYVYKGTL-----GEDEMIVAVKVINLKYKGASR-SFVAE 578
E A + + S +GQGSFG VY+G E E VA+K +N R F+ E
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 579 CEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVE----VC 634
++ ++++++ + S +G + E M G LK +L ++E +
Sbjct: 64 ASVMKEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLA 118
Query: 635 KLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690
SL + + +A ++A M YL+ + VH DL N ++ D + DFG+ +
Sbjct: 119 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 171
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+K I L + +G + + E L+ + H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ LK ++ S + L LI+ + +
Sbjct: 72 VKLLDVIH------TENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIK--SYLFQLL 120
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T + +
Sbjct: 121 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYTHEV- 171
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 172 --VTLWYRAPEILLGCKYYSTAVDIWS 196
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+K I L + +G + + E L+ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ LK ++ S + L LI+ + +
Sbjct: 64 VKLLDVIH------TENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIK--SYLFQLL 112
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T + +
Sbjct: 113 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYTHEV- 163
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 164 --VTLWYRAPEILLGCKYYSTAVDIWS 188
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+K I L + +G + + E L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ LK ++ S + L LI+ + +
Sbjct: 65 VKLLDVIH------TENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIK--SYLFQLL 113
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T + +
Sbjct: 114 QGLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYTHEV- 164
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 165 --VTLWYRAPEILLGCKYYSTAVDIWS 189
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+K I L + +G + + E L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ LK ++ S + L LI+ + +
Sbjct: 65 VKLLDVIH------TENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIK--SYLFQLL 113
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T + +
Sbjct: 114 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYTHEV- 164
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 165 --VTLWYRAPEILLGCKYYSTAVDIWS 189
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+K I L + +G + + E L+ + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ LK ++ S + L LI+ + +
Sbjct: 66 VKLLDVIH------TENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIK--SYLFQLL 114
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T + +
Sbjct: 115 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYTHEV- 165
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 166 --VTLWYRAPEILLGCKYYSTAVDIWS 190
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+K I L + +G + + E L+ + H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ LK ++ S + L LI+ + +
Sbjct: 69 VKLLDVIH------TENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIK--SYLFQLL 117
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T + +
Sbjct: 118 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYTHEV- 168
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 169 --VTLWYRAPEILLGCKYYSTAVDIWS 193
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 91/213 (42%), Gaps = 35/213 (16%)
Query: 528 KATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRH 587
+ +F ++GQG+FG V K D A+K I + S + ++E L ++ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS-TILSEVMLLASLNH 61
Query: 588 -------------RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVC 634
RN +K +T K T F EY ENG+L D +H + +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKK---KSTLF--IQMEYCENGTLYDLIHSENLNQQRD 116
Query: 635 KLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK---- 690
+ + R + A+ Y+H ++H DLKP N+ +D + DFGLAK
Sbjct: 117 EYWRLFR-----QILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHR 168
Query: 691 FLSDHQLDTAVKTPSSSIGLKGTVG---YVAPE 720
L +LD+ P SS L +G YVA E
Sbjct: 169 SLDILKLDSQ-NLPGSSDNLTSAIGTAMYVATE 200
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 23/207 (11%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVA-ECEALRNIRHR 588
+F ++G+GSF A+K++ ++ K +V E + + + H
Sbjct: 31 DFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
+K+ F+ + F Y +NG L ++ + E C R A ++
Sbjct: 91 FFVKLYFT-----FQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA-EI 139
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
SA+EYLH ++H DLKP N+LL+ DM + DFG AK LS + +
Sbjct: 140 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES------KQARAN 190
Query: 709 GLKGTVGYVAPEYGMGSEASMTGDIFT 735
GT YV+PE A + D++
Sbjct: 191 XFVGTAQYVSPELLTEKSACKSSDLWA 217
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 47/208 (22%)
Query: 539 IGQGSFGYVYKG-TLGEDE----MIVAVKVINLKYKGASRSF---VAECEALRNI-RHRN 589
+G+G+FG V +G D+ + V V LK + ++E E ++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 590 LIKIITICSSTDFKGTDFKAFVF-EYMENGSLKDWL---------------HQSDDQVEV 633
+I ++ C+ D +V EY G+L+++L H ++Q
Sbjct: 96 IINLLGACTQ------DGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQ--- 146
Query: 634 CKLSLIQRVNIAIDVASAMEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL 692
LS V+ A VA MEYL C +H DL NVL+ D V + DFGLA+ +
Sbjct: 147 --LSSKDLVSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADFGLARDI 200
Query: 693 SDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
H +D KT + + +K ++APE
Sbjct: 201 --HHIDXXKKTTNGRLPVK----WMAPE 222
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+K I L + +G + + E L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ LK ++ S + L LI+ + +
Sbjct: 65 VKLLDVIH------TENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIK--SYLFQLL 113
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T + +
Sbjct: 114 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYTHEV- 164
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 165 --VTLWYRAPEILLGCKYYSTAVDIWS 189
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+K I L + +G + + E L+ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ LK ++ S + L LI+ + +
Sbjct: 64 VKLLDVIH------TENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIK--SYLFQLL 112
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T + +
Sbjct: 113 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYTHEV- 163
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 164 --VTLWYRAPEILLGCKYYSTAVDIWS 188
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 18/176 (10%)
Query: 525 ELSKATGEFSSSNMIGQGSFGYVYKGTL-----GEDEMIVAVKVINLKYKGASR-SFVAE 578
E A + + S +GQGSFG VY+G E E VA+K +N R F+ E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 579 CEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVE----VC 634
++ ++++++ + S +G + E M G LK +L ++E +
Sbjct: 73 ASVMKEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 635 KLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690
SL + + +A ++A M YL+ + VH DL N ++ D + DFG+ +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 18/176 (10%)
Query: 525 ELSKATGEFSSSNMIGQGSFGYVYKGTL-----GEDEMIVAVKVINLKYKGASR-SFVAE 578
E A + + S +GQGSFG VY+G E E VA+K +N R F+ E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 579 CEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVE----VC 634
++ ++++++ + S +G + E M G LK +L ++E +
Sbjct: 66 ASVMKEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 635 KLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690
SL + + +A ++A M YL+ + VH DL N ++ D + DFG+ +
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 173
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 110/254 (43%), Gaps = 39/254 (15%)
Query: 200 TVINFGIGRNQISGTIPPGIRNLVNLIGFGAEENQLHGTIPDAIGELKNLQKLCLFRNFL 259
T INF NQ++ P ++NL L+ NQ+ P + L NL L LF N +
Sbjct: 66 TQINFS--NNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQI 119
Query: 260 QGRIPSGLGNLTKLANLELSSNSLQGNIPSSLGNCQNLMSFTASQNKLTGALPHQLLSIT 319
P L NLT L LELSSN++ S+L +L + S N++T P L ++T
Sbjct: 120 TDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFSSNQVTDLKP--LANLT 173
Query: 320 TXXXXXXXXXXXXXXXXXXQVGHLKNLVILDISSNQFSGVIP------------------ 361
T ++ +L++L+ ++NQ S + P
Sbjct: 174 TLERLDISSNKVSDISVLAKLTNLESLI---ATNNQISDITPLGILTNLDELSLNGNQLK 230
Query: 362 --GTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNVSSNNLSGQIPEFLKNLSVLE 419
GTL++ L LD+++N + P LS L + EL + +N +S P L L+ L
Sbjct: 231 DIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALT 286
Query: 420 FLSLSYNHFEGEVP 433
L L+ N E P
Sbjct: 287 NLELNENQLEDISP 300
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 46/226 (20%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLI 591
+F + +G G+ G V+K + +++A K+I+L+ K A R+ + IR +
Sbjct: 69 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI--------IRE---L 117
Query: 592 KIITICSS---TDFKGTDFK----AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNI 644
+++ C+S F G + + E+M+ GSL L ++ E ++ +V+I
Sbjct: 118 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVSI 173
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A V + YL + ++H D+KPSN+L++ +CDFG++ L D ++ V
Sbjct: 174 A--VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV--- 226
Query: 705 SSSIGLKGTVGYVAPEYGMGSEASMTGDIFT----------GRRPI 740
GT Y++PE G+ S+ DI++ GR PI
Sbjct: 227 -------GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 110/254 (43%), Gaps = 39/254 (15%)
Query: 200 TVINFGIGRNQISGTIPPGIRNLVNLIGFGAEENQLHGTIPDAIGELKNLQKLCLFRNFL 259
T INF NQ++ P ++NL L+ NQ+ P + L NL L LF N +
Sbjct: 66 TQINFS--NNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQI 119
Query: 260 QGRIPSGLGNLTKLANLELSSNSLQGNIPSSLGNCQNLMSFTASQNKLTGALPHQLLSIT 319
P L NLT L LELSSN++ S+L +L + S N++T P L ++T
Sbjct: 120 TDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFSSNQVTDLKP--LANLT 173
Query: 320 TXXXXXXXXXXXXXXXXXXQVGHLKNLVILDISSNQFSGVIP------------------ 361
T ++ +L++L+ ++NQ S + P
Sbjct: 174 TLERLDISSNKVSDISVLAKLTNLESLI---ATNNQISDITPLGILTNLDELSLNGNQLK 230
Query: 362 --GTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNVSSNNLSGQIPEFLKNLSVLE 419
GTL++ L LD+++N + P LS L + EL + +N +S P L L+ L
Sbjct: 231 DIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALT 286
Query: 420 FLSLSYNHFEGEVP 433
L L+ N E P
Sbjct: 287 NLELNENQLEDISP 300
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 18/176 (10%)
Query: 525 ELSKATGEFSSSNMIGQGSFGYVYKGTL-----GEDEMIVAVKVINLKYKGASR-SFVAE 578
E A + + S +GQGSFG VY+G E E VA+K +N R F+ E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 579 CEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVE----VC 634
++ ++++++ + S +G + E M G LK +L ++E +
Sbjct: 79 ASVMKEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 635 KLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690
SL + + +A ++A M YL+ + VH DL N ++ D + DFG+ +
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 18/176 (10%)
Query: 525 ELSKATGEFSSSNMIGQGSFGYVYKGTL-----GEDEMIVAVKVINLKYKGASR-SFVAE 578
E A + + S +GQGSFG VY+G E E VA+K +N R F+ E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 579 CEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVE----VC 634
++ ++++++ + S +G + E M G LK +L ++E +
Sbjct: 72 ASVMKEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 635 KLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690
SL + + +A ++A M YL+ + VH DL N ++ D + DFG+ +
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 18/176 (10%)
Query: 525 ELSKATGEFSSSNMIGQGSFGYVYKGTL-----GEDEMIVAVKVINLKYKGASR-SFVAE 578
E A + + S +GQGSFG VY+G E E VA+K +N R F+ E
Sbjct: 10 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 69
Query: 579 CEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVE----VC 634
++ ++++++ + S +G + E M G LK +L ++E +
Sbjct: 70 ASVMKEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 635 KLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690
SL + + +A ++A M YL+ + VH DL N ++ D + DFG+ +
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 177
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 23/216 (10%)
Query: 526 LSKATGEFSSSNMIGQGSFGYVYKGT-LGEDEMIVAVKVINLKY--KGASRSFVAECEAL 582
L +A ++ IG+G++G V+K L VA+K + ++ +G S + E L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 583 RNIR---HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLI 639
R++ H N++++ +C+ + VFE+++ L +L D+V +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL----DKVPEPGVPTE 120
Query: 640 QRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDT 699
++ + +++LH H +VH DLKP N+L+ + DFGLA+ S T
Sbjct: 121 TIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALT 177
Query: 700 AVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
+V T+ Y APE + S + D+++
Sbjct: 178 SVVV---------TLWYRAPEVLLQSSYATPVDLWS 204
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 45/207 (21%)
Query: 539 IGQGSFGYVYKG-TLGEDE----MIVAVKVINLKYKGASRSF---VAECEALRNI-RHRN 589
+G+G+FG V +G D+ + V V LK + ++E E ++ I +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 590 LIKIITICSSTDFKGTDFKAFVF-EYMENGSLKDWL---------------HQSDDQVEV 633
+I ++ C+ D +V EY G+L+++L H ++Q
Sbjct: 137 IINLLGACTQ------DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ--- 187
Query: 634 CKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLS 693
LS V+ A VA MEYL +H DL NVL+ D V + DFGLA+ +
Sbjct: 188 --LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI- 241
Query: 694 DHQLDTAVKTPSSSIGLKGTVGYVAPE 720
H +D KT + + +K ++APE
Sbjct: 242 -HHIDYYKKTTNGRLPVK----WMAPE 263
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 18/176 (10%)
Query: 525 ELSKATGEFSSSNMIGQGSFGYVYKGTL-----GEDEMIVAVKVINLKYKGASR-SFVAE 578
E A + + S +GQGSFG VY+G E E VA+K +N R F+ E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 579 CEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVE----VC 634
++ ++++++ + S +G + E M G LK +L ++E +
Sbjct: 73 ASVMKEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 635 KLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690
SL + + +A ++A M YL+ + VH DL N ++ D + DFG+ +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 121/273 (44%), Gaps = 29/273 (10%)
Query: 532 EFSSSNMIGQGSFGYVYKG-TLGEDEMI-VAVKVINLKYK---GASRSFVAECEALRNIR 586
EF ++G G+FG VYKG + E E + + V ++ L+ A++ + E + ++
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
+ ++ +++ IC ++ + + + M G L D++ + D + L +N +
Sbjct: 110 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 158
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV---KT 703
+A M YL +VH DL NVL+ + DFGLAK L + + K
Sbjct: 159 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 215
Query: 704 PSSSIGLKGTVGYV-APEYGMGSEASMTGDIFT-GRRPIDAV-FNEGHSLHEFAKTALPE 760
P + L+ + + + + S ++ T G +P D + +E S+ E + LP+
Sbjct: 216 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQ 274
Query: 761 KVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECL 793
+ +D + +M MI D R K E +
Sbjct: 275 PPICTIDVYM---IMVKCWMIDADSRPKFRELI 304
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
++ + +IG GSFG VY+ L + +VA+K + + +R E + +R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 77
Query: 593 I-ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQ----VEVCKLSLIQRVNIAID 647
+ SS + K + V +Y+ + H S + V KL + Q
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 130
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVCDFGLAKFL 692
+ ++ Y+H + H D+KP N+LLD D V +CDFG AK L
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 89/199 (44%), Gaps = 30/199 (15%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIR----- 586
++ IG+GS+G V+K + IVA+K K+ + V + ALR IR
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIK----KFLESEDDPVIKKIALREIRMLKQL 59
Query: 587 -HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIA 645
H NL+ ++ + F+ VFEY ++ L H+ D L++ +I
Sbjct: 60 KHPNLVNLLEV-----FRRKRRLHLVFEYCDHTVL----HELDRYQRGVPEHLVK--SIT 108
Query: 646 IDVASAMEYLH-HHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL---SDHQLD-TA 700
A+ + H H+C +H D+KP N+L+ V +CDFG A+ L SD+ D A
Sbjct: 109 WQTLQAVNFCHKHNC----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVA 164
Query: 701 VKTPSSSIGLKGTVGYVAP 719
+ S L G Y P
Sbjct: 165 TRWYRSPELLVGDTQYGPP 183
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 89/214 (41%), Gaps = 35/214 (16%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVAECEALRNI 585
A +F +G+G FG VY + + I+A+KV+ L+ G E E ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLI--QRVN 643
RH N++++ F + EY G + E+ KLS QR
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPRGEVYK---------ELQKLSKFDEQRTA 116
Query: 644 IAI-DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVK 702
I ++A+A+ Y H ++H D+KP N+LL + DFG +V
Sbjct: 117 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVH 162
Query: 703 TPSS-SIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
PSS L GT+ Y+ PE G D+++
Sbjct: 163 APSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWS 196
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 23/216 (10%)
Query: 526 LSKATGEFSSSNMIGQGSFGYVYKGT-LGEDEMIVAVKVINLKY--KGASRSFVAECEAL 582
L +A ++ IG+G++G V+K L VA+K + ++ +G S + E L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 583 RNIR---HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLI 639
R++ H N++++ +C+ + VFE+++ L +L D+V +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL----DKVPEPGVPTE 120
Query: 640 QRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDT 699
++ + +++LH H +VH DLKP N+L+ + DFGLA+ S T
Sbjct: 121 TIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALT 177
Query: 700 AVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
+V T+ Y APE + S + D+++
Sbjct: 178 SVVV---------TLWYRAPEVLLQSSYATPVDLWS 204
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 23/211 (10%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK-YKGASRSFVAECEALRNIRH 587
++ +F +G G++ VYKG + VA+K + L +G + + E ++ ++H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSD--DQVEVCKLSLIQRVNIA 645
N++++ + T+ K T VFE+M+N LK ++ + +L+L++
Sbjct: 63 ENIVRLYDVIH-TENKLT----LVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQ 116
Query: 646 IDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPS 705
+ + + H + ++H DLKP N+L++ + DFGLA+ V T S
Sbjct: 117 L--LQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG-----IPVNTFS 166
Query: 706 SSIGLKGTVGYVAPEYGMGSEASMTG-DIFT 735
S + T+ Y AP+ MGS T DI++
Sbjct: 167 SEV---VTLWYRAPDVLMGSRTYSTSIDIWS 194
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 18/176 (10%)
Query: 525 ELSKATGEFSSSNMIGQGSFGYVYKGTL-----GEDEMIVAVKVINLKYKGASR-SFVAE 578
E A + + S +GQGSFG VY+G E E VA+K +N R F+ E
Sbjct: 41 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 100
Query: 579 CEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVE----VC 634
++ ++++++ + S +G + E M G LK +L ++E +
Sbjct: 101 ASVMKEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLA 155
Query: 635 KLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690
SL + + +A ++A M YL+ + VH DL N ++ D + DFG+ +
Sbjct: 156 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 208
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
++ + +IG GSFG VY+ L + +VA+K + + +R E + +R + H N+++
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 82
Query: 593 I-ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQ----VEVCKLSLIQRVNIAID 647
+ SS + K + V +Y+ + H S + V KL + Q
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 135
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVCDFGLAKFL 692
+ ++ Y+H + H D+KP N+LLD D V +CDFG AK L
Sbjct: 136 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 178
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
++ + +IG GSFG VY+ L + +VA+K + + +R E + +R + H N+++
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 115
Query: 593 I-ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQ----VEVCKLSLIQRVNIAID 647
+ SS + K + V +Y+ + H S + V KL + Q
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 168
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVCDFGLAKFL 692
+ ++ Y+H + H D+KP N+LLD D V +CDFG AK L
Sbjct: 169 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 211
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 18/176 (10%)
Query: 525 ELSKATGEFSSSNMIGQGSFGYVYKGTL-----GEDEMIVAVKVINLKYKGASR-SFVAE 578
E A + + S +GQGSFG VY+G E E VA+K +N R F+ E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 579 CEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVE----VC 634
++ ++++++ + S +G + E M G LK +L ++E +
Sbjct: 72 ASVMKEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 635 KLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690
SL + + +A ++A M YL+ + VH DL N ++ D + DFG+ +
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
++ + +IG GSFG VY+ L + +VA+K + + +R E + +R + H N+++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 111
Query: 593 I-ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQ----VEVCKLSLIQRVNIAID 647
+ SS + K + V +Y+ + H S + V KL + Q
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 164
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVCDFGLAKFL 692
+ ++ Y+H + H D+KP N+LLD D V +CDFG AK L
Sbjct: 165 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+K I L + +G + + E L+ + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ LK ++ S + L LI+ + +
Sbjct: 68 VKLLDVIH------TENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIK--SYLFQLL 116
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T +
Sbjct: 117 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEV- 167
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 168 --VTLWYRAPEILLGCKYYSTAVDIWS 192
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+K I L + +G + + E L+ + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ LK ++ S + L LI+ + +
Sbjct: 68 VKLLDVIH------TENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIK--SYLFQLL 116
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T +
Sbjct: 117 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEV- 167
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 168 --VTLWYRAPEILLGCKYYSTAVDIWS 192
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+K I L + +G + + E L+ + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ LK ++ S + L LI+ + +
Sbjct: 67 VKLLDVIH------TENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIK--SYLFQLL 115
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T +
Sbjct: 116 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEV- 166
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 167 --VTLWYRAPEILLGCKYYSTAVDIWS 191
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
++ + +IG GSFG VY+ L + +VA+K + + +R E + +R + H N+++
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 113
Query: 593 I-ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQ----VEVCKLSLIQRVNIAID 647
+ SS + K + V +Y+ + H S + V KL + Q
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 166
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVCDFGLAKFL 692
+ ++ Y+H + H D+KP N+LLD D V +CDFG AK L
Sbjct: 167 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 209
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
++ + +IG GSFG VY+ L + +VA+K + + +R E + +R + H N+++
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 156
Query: 593 I-ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQ----VEVCKLSLIQRVNIAID 647
+ SS + K + V +Y+ + H S + V KL + Q
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 209
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVCDFGLAKFL 692
+ ++ Y+H + H D+KP N+LLD D V +CDFG AK L
Sbjct: 210 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 252
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+K I L + +G + + E L+ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ LK ++ S + L LI+ + +
Sbjct: 64 VKLLDVIH------TENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIK--SYLFQLL 112
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T +
Sbjct: 113 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEV- 163
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 164 --VTLWYRAPEILLGCKYYSTAVDIWS 188
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+K I L + +G + + E L+ + H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ LK ++ S + L LI+ + +
Sbjct: 69 VKLLDVIH------TENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIK--SYLFQLL 117
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T +
Sbjct: 118 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEV- 168
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 169 --VTLWYRAPEILLGCKYYSTAVDIWS 193
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
++ + +IG GSFG VY+ L + +VA+K + + +R E + +R + H N+++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 89
Query: 593 I-ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQ----VEVCKLSLIQRVNIAID 647
+ SS + K + V +Y+ + H S + V KL + Q
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 142
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVCDFGLAKFL 692
+ ++ Y+H + H D+KP N+LLD D V +CDFG AK L
Sbjct: 143 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
++ + +IG GSFG VY+ L + +VA+K + + +R E + +R + H N+++
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 96
Query: 593 I-ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQ----VEVCKLSLIQRVNIAID 647
+ SS + K + V +Y+ + H S + V KL + Q
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 149
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVCDFGLAKFL 692
+ ++ Y+H + H D+KP N+LLD D V +CDFG AK L
Sbjct: 150 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 192
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+K I L + +G + + E L+ + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ LK ++ S + L LI+ + +
Sbjct: 66 VKLLDVIH------TENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIK--SYLFQLL 114
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T +
Sbjct: 115 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEV- 165
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 166 --VTLWYRAPEILLGCKYYSTAVDIWS 190
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
++ + +IG GSFG VY+ L + +VA+K + + +R E + +R + H N+++
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 81
Query: 593 I-ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQ----VEVCKLSLIQRVNIAID 647
+ SS + K + V +Y+ + H S + V KL + Q
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 134
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVCDFGLAKFL 692
+ ++ Y+H + H D+KP N+LLD D V +CDFG AK L
Sbjct: 135 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 177
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
++ + +IG GSFG VY+ L + +VA+K + + +R E + +R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 77
Query: 593 I-ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQ----VEVCKLSLIQRVNIAID 647
+ SS + K + V +Y+ + H S + V KL + Q
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 130
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVCDFGLAKFL 692
+ ++ Y+H + H D+KP N+LLD D V +CDFG AK L
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+K I L + +G + + E L+ + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ LK ++ S + L LI+ + +
Sbjct: 67 VKLLDVIH------TENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIK--SYLFQLL 115
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T +
Sbjct: 116 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEV- 166
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 167 --VTLWYRAPEILLGCKYYSTAVDIWS 191
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+K I L + +G + + E L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ LK ++ S + L LI+ + +
Sbjct: 65 VKLLDVIH------TENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIK--SYLFQLL 113
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T +
Sbjct: 114 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEV- 164
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 165 --VTLWYRAPEILLGCKYYSTAVDIWS 189
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
++ + +IG GSFG VY+ L + +VA+K + + +R E + +R + H N+++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 89
Query: 593 I-ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQ----VEVCKLSLIQRVNIAID 647
+ SS + K + V +Y+ + H S + V KL + Q
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 142
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVCDFGLAKFL 692
+ ++ Y+H + H D+KP N+LLD D V +CDFG AK L
Sbjct: 143 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
++ + +IG GSFG VY+ L + +VA+K + + +R E + +R + H N+++
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 78
Query: 593 I-ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQ----VEVCKLSLIQRVNIAID 647
+ SS + K + V +Y+ + H S + V KL + Q
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 131
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVCDFGLAKFL 692
+ ++ Y+H + H D+KP N+LLD D V +CDFG AK L
Sbjct: 132 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 174
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+K I L + +G + + E L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ LK ++ S + L LI+ + +
Sbjct: 65 VKLLDVIH------TENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIK--SYLFQLL 113
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T +
Sbjct: 114 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEV- 164
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 165 --VTLWYRAPEILLGCKYYSTAVDIWS 189
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
++ + +IG GSFG VY+ L + +VA+K + + +R E + +R + H N+++
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 85
Query: 593 I-ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQ----VEVCKLSLIQRVNIAID 647
+ SS + K + V +Y+ + H S + V KL + Q
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 138
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVCDFGLAKFL 692
+ ++ Y+H + H D+KP N+LLD D V +CDFG AK L
Sbjct: 139 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 181
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
++ + +IG GSFG VY+ L + +VA+K + + +R E + +R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 77
Query: 593 I-ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQ----VEVCKLSLIQRVNIAID 647
+ SS + K + V +Y+ + H S + V KL + Q
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 130
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVCDFGLAKFL 692
+ ++ Y+H + H D+KP N+LLD D V +CDFG AK L
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
++ + +IG GSFG VY+ L + +VA+K + + +R E + +R + H N+++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 111
Query: 593 I-ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQ----VEVCKLSLIQRVNIAID 647
+ SS + K + V +Y+ + H S + V KL + Q
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 164
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVCDFGLAKFL 692
+ ++ Y+H + H D+KP N+LLD D V +CDFG AK L
Sbjct: 165 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 109/254 (42%), Gaps = 39/254 (15%)
Query: 200 TVINFGIGRNQISGTIPPGIRNLVNLIGFGAEENQLHGTIPDAIGELKNLQKLCLFRNFL 259
T INF NQ++ P ++NL L+ NQ+ P + L NL L LF N +
Sbjct: 66 TQINFS--NNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQI 119
Query: 260 QGRIPSGLGNLTKLANLELSSNSLQGNIPSSLGNCQNLMSFTASQNKLTGALPHQLLSIT 319
P L NLT L LELSSN++ S+L +L S N++T P L ++T
Sbjct: 120 TDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLNFSSNQVTDLKP--LANLT 173
Query: 320 TXXXXXXXXXXXXXXXXXXQVGHLKNLVILDISSNQFSGVIP------------------ 361
T ++ +L++L+ ++NQ S + P
Sbjct: 174 TLERLDISSNKVSDISVLAKLTNLESLI---ATNNQISDITPLGILTNLDELSLNGNQLK 230
Query: 362 --GTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNVSSNNLSGQIPEFLKNLSVLE 419
GTL++ L LD+++N + P LS L + EL + +N +S P L L+ L
Sbjct: 231 DIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALT 286
Query: 420 FLSLSYNHFEGEVP 433
L L+ N E P
Sbjct: 287 NLELNENQLEDISP 300
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+K I L + +G + + E L+ + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ LK ++ S + L LI+ + +
Sbjct: 67 VKLLDVIH------TENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIK--SYLFQLL 115
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T +
Sbjct: 116 QGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEV- 166
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 167 --VTLWYRAPEILLGCKYYSTAVDIWS 191
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+K I L + +G + + E L+ + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ LK ++ S + L LI+ + +
Sbjct: 68 VKLLDVIH------TENKLYLVFEFLHQ-DLKTFMDAS--ALTGIPLPLIK--SYLFQLL 116
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T +
Sbjct: 117 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEV- 167
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 168 --VTLWYRAPEILLGCKYYSTAVDIWS 192
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
++ + +IG GSFG VY+ L + +VA+K + + +R E + +R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 77
Query: 593 I-ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQ----VEVCKLSLIQRVNIAID 647
+ SS + K + V +Y+ + H S + V KL + Q
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 130
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVCDFGLAKFL 692
+ ++ Y+H + H D+KP N+LLD D V +CDFG AK L
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
++ + +IG GSFG VY+ L + +VA+K + + +R E + +R + H N+++
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 105
Query: 593 I-ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQ----VEVCKLSLIQRVNIAID 647
+ SS + K + V +Y+ + H S + V KL + Q
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 158
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVCDFGLAKFL 692
+ ++ Y+H + H D+KP N+LLD D V +CDFG AK L
Sbjct: 159 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 201
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 46/226 (20%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLI 591
+F + +G G+ G V+K + +++A K+I+L+ K A R+ + IR +
Sbjct: 34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI--------IRE---L 82
Query: 592 KIITICSS---TDFKGTDFK----AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNI 644
+++ C+S F G + + E+M+ GSL L ++ E ++ +V+I
Sbjct: 83 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVSI 138
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A V + YL + ++H D+KPSN+L++ +CDFG++ L D ++ V
Sbjct: 139 A--VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV--- 191
Query: 705 SSSIGLKGTVGYVAPEYGMGSEASMTGDIFT----------GRRPI 740
GT Y++PE G+ S+ DI++ GR PI
Sbjct: 192 -------GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
++ + +IG GSFG VY+ L + +VA+K + + +R E + +R + H N+++
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVR 90
Query: 593 I-ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQ----VEVCKLSLIQRVNIAID 647
+ SS + K + V +Y+ + H S + V KL + Q
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 143
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVCDFGLAKFL 692
+ ++ Y+H + H D+KP N+LLD D V +CDFG AK L
Sbjct: 144 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 186
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+K I L + +G + + E L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ LK ++ S + L LI+ + +
Sbjct: 65 VKLLDVIH------TENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIK--SYLFQLL 113
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T +
Sbjct: 114 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEV- 164
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 165 --VTLWYRAPEILLGCKYYSTAVDIWS 189
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+K I L + +G + + E L+ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ LK ++ S + L LI+ + +
Sbjct: 64 VKLLDVIH------TENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIK--SYLFQLL 112
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T +
Sbjct: 113 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEV- 163
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 164 --VTLWYRAPEILLGCKYYSTAVDIWS 188
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+K I L + +G + + E L+ + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ LK ++ S + L LI+ + +
Sbjct: 66 VKLLDVIH------TENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIK--SYLFQLL 114
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T +
Sbjct: 115 QGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEV- 165
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 166 --VTLWYRAPEILLGCKYYSTAVDIWS 190
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+K I L + +G + + E L+ + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ LK ++ S + L LI+ + +
Sbjct: 66 VKLLDVIH------TENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIK--SYLFQLL 114
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T +
Sbjct: 115 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEV- 165
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 166 --VTLWYRAPEILLGCKYYSTAVDIWS 190
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 46/226 (20%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLI 591
+F + +G G+ G V+K + +++A K+I+L+ K A+RN R L
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK----------PAIRNQIIREL- 55
Query: 592 KIITICSS---TDFKGTDFK----AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNI 644
+++ C+S F G + + E+M+ GSL L ++ E ++ +V+I
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVSI 111
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A V + YL + ++H D+KPSN+L++ +CDFG++ L D ++ V
Sbjct: 112 A--VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV--- 164
Query: 705 SSSIGLKGTVGYVAPEYGMGSEASMTGDIFT----------GRRPI 740
GT Y++PE G+ S+ DI++ GR PI
Sbjct: 165 -------GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+K I L + +G + + E L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ LK ++ S + L LI+ + +
Sbjct: 65 VKLLDVIH------TENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIK--SYLFQLL 113
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T +
Sbjct: 114 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEV- 164
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 165 --VTLWYRAPEILLGCKYYSTAVDIWS 189
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 46/226 (20%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLI 591
+F + +G G+ G V+K + +++A K+I+L+ K A+RN R L
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK----------PAIRNQIIREL- 55
Query: 592 KIITICSS---TDFKGTDFK----AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNI 644
+++ C+S F G + + E+M+ GSL L ++ E ++ +V+I
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVSI 111
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A V + YL + ++H D+KPSN+L++ +CDFG++ L D ++ V
Sbjct: 112 A--VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV--- 164
Query: 705 SSSIGLKGTVGYVAPEYGMGSEASMTGDIFT----------GRRPI 740
GT Y++PE G+ S+ DI++ GR PI
Sbjct: 165 -------GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 45/207 (21%)
Query: 539 IGQGSFGYVYKG-TLGEDE----MIVAVKVINLKYKGASRSF---VAECEALRNI-RHRN 589
+G+G+FG V +G D+ + V V LK + ++E E ++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 590 LIKIITICSSTDFKGTDFKAFVF-EYMENGSLKDWL---------------HQSDDQVEV 633
+I ++ C+ D +V EY G+L+++L H ++Q
Sbjct: 96 IINLLGACTQ------DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ--- 146
Query: 634 CKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLS 693
LS V+ A VA MEYL +H DL NVL+ D V + DFGLA+ +
Sbjct: 147 --LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI- 200
Query: 694 DHQLDTAVKTPSSSIGLKGTVGYVAPE 720
H +D KT + + +K ++APE
Sbjct: 201 -HHIDYYKKTTNGRLPVK----WMAPE 222
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 120/273 (43%), Gaps = 29/273 (10%)
Query: 532 EFSSSNMIGQGSFGYVYKG-TLGEDEMI---VAVKVIN-LKYKGASRSFVAECEALRNIR 586
EF ++G G+FG VYKG + E E + VA+K + A++ + E + ++
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
+ ++ +++ IC ++ + + + M G L D++ + D + L +N +
Sbjct: 80 NPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 128
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV---KT 703
+A M YL +VH DL NVL+ + DFGLAK L + + K
Sbjct: 129 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 185
Query: 704 PSSSIGLKGTVGYV-APEYGMGSEASMTGDIFT-GRRPIDAV-FNEGHSLHEFAKTALPE 760
P + L+ + + + + S ++ T G +P D + +E S+ E + LP+
Sbjct: 186 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQ 244
Query: 761 KVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECL 793
+ +D + +M MI D R K E +
Sbjct: 245 PPICTID---VYMIMVKCWMIDADSRPKFRELI 274
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 45/207 (21%)
Query: 539 IGQGSFGYVYKG-TLGEDE----MIVAVKVINLKYKGASRSF---VAECEALRNI-RHRN 589
+G+G+FG V +G D+ + V V LK + ++E E ++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 590 LIKIITICSSTDFKGTDFKAFVF-EYMENGSLKDWL---------------HQSDDQVEV 633
+I ++ C+ D +V EY G+L+++L H ++Q
Sbjct: 96 IINLLGACTQ------DGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQ--- 146
Query: 634 CKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLS 693
LS V+ A VA MEYL +H DL NVL+ D V + DFGLA+ +
Sbjct: 147 --LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI- 200
Query: 694 DHQLDTAVKTPSSSIGLKGTVGYVAPE 720
H +D KT + + +K ++APE
Sbjct: 201 -HHIDYYKKTTNGRLPVK----WMAPE 222
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 88/195 (45%), Gaps = 32/195 (16%)
Query: 538 MIGQGSFGYVYKGTLGEDEMIVAVKVIN---LKYKGASRSFVAECEALRNIRHRNLIKII 594
M+G+GSFG V K + AVKVIN K K S + + E E L+ + H N++K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTS-TILREVELLKKLDHPNIMKLF 87
Query: 595 TICS-STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAME 653
I S+ F V E G L D+ ++ + S I V S +
Sbjct: 88 EILEDSSSF------YIVGELYTGGEL------FDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 654 YLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
Y+H H +VH DLKP N+LL + D + DFGL+ Q +T +K
Sbjct: 136 YMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRI----- 184
Query: 711 KGTVGYVAPEYGMGS 725
GT Y+APE G+
Sbjct: 185 -GTAYYIAPEVLRGT 198
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 45/207 (21%)
Query: 539 IGQGSFGYVYKG-TLGEDE----MIVAVKVINLKYKGASRSF---VAECEALRNI-RHRN 589
+G+G+FG V +G D+ + V V LK + ++E E ++ I +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 590 LIKIITICSSTDFKGTDFKAFVF-EYMENGSLKDWL---------------HQSDDQVEV 633
+I ++ C+ D +V EY G+L+++L H ++Q
Sbjct: 89 IINLLGACTQ------DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ--- 139
Query: 634 CKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLS 693
LS V+ A VA MEYL +H DL NVL+ D V + DFGLA+ +
Sbjct: 140 --LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI- 193
Query: 694 DHQLDTAVKTPSSSIGLKGTVGYVAPE 720
H +D KT + + +K ++APE
Sbjct: 194 -HHIDYYKKTTNGRLPVK----WMAPE 215
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 118/277 (42%), Gaps = 37/277 (13%)
Query: 532 EFSSSNMIGQGSFGYVYKGTL---GEDEMI-VAVKVIN-LKYKGASRSFVAECEALRNIR 586
EF ++G G+FG VYKG GE I VA+K + A++ + E + ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
+ ++ +++ IC ++ + + + M G L D++ + D + L +N +
Sbjct: 79 NPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 127
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV---KT 703
+A M YL +VH DL NVL+ + DFGLAK L + + K
Sbjct: 128 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 704 PSSSIGLKGTVGYVAPE------YGMGSEASMTGDIFTGRRPIDAV-FNEGHSLHEFAKT 756
P + L+ + + YG+ MT G +P D + +E S+ E +
Sbjct: 185 PIKWMALESILHRIYTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGER 240
Query: 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECL 793
LP+ + +D + +M MI D R K E +
Sbjct: 241 -LPQPPICTIDVYM---IMVKCWMIDADSRPKFRELI 273
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+K I L + +G + + E L+ + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE+++ LK ++ S + L LI+ + +
Sbjct: 68 VKLLDVIH------TENKLYLVFEHVDQ-DLKKFMDAS--ALTGIPLPLIK--SYLFQLL 116
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T +
Sbjct: 117 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEV- 167
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 168 --VTLWYRAPEILLGCKYYSTAVDIWS 192
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 30/213 (14%)
Query: 515 EKQFPMVSYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRS 574
E + P +A + ++ ++IG+G V + AVK++ + + S
Sbjct: 80 EDELP--DWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPE 137
Query: 575 FVAEC-EALRNIRH--RNLI---KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSD 628
+ E EA R H R + IIT+ S ++ + F VF+ M G L D+L
Sbjct: 138 QLEEVREATRRETHILRQVAGHPHIITLIDS--YESSSFMFLVFDLMRKGELFDYL---- 191
Query: 629 DQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688
E LS + +I + A+ +LH + +VH DLKP N+LLD +M + DFG
Sbjct: 192 --TEKVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGF 246
Query: 689 AKFLSDHQLDTAVKTPSSSIG-LKGTVGYVAPE 720
+ L P + L GT GY+APE
Sbjct: 247 SCHLE----------PGEKLRELCGTPGYLAPE 269
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 46/226 (20%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLI 591
+F + +G G+ G V+K + +++A K+I+L+ K A+RN R L
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK----------PAIRNQIIREL- 55
Query: 592 KIITICSS---TDFKGTDFK----AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNI 644
+++ C+S F G + + E+M+ GSL L ++ E ++ +V+I
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVSI 111
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A V + YL + ++H D+KPSN+L++ +CDFG++ L D ++ V
Sbjct: 112 A--VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV--- 164
Query: 705 SSSIGLKGTVGYVAPEYGMGSEASMTGDIFT----------GRRPI 740
GT Y++PE G+ S+ DI++ GR PI
Sbjct: 165 -------GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 88/195 (45%), Gaps = 32/195 (16%)
Query: 538 MIGQGSFGYVYKGTLGEDEMIVAVKVIN---LKYKGASRSFVAECEALRNIRHRNLIKII 594
M+G+GSFG V K + AVKVIN K K S + + E E L+ + H N++K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTS-TILREVELLKKLDHPNIMKLF 87
Query: 595 TICS-STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAME 653
I S+ F V E G L D+ ++ + S I V S +
Sbjct: 88 EILEDSSSF------YIVGELYTGGEL------FDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 654 YLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
Y+H H +VH DLKP N+LL + D + DFGL+ Q +T +K
Sbjct: 136 YMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF---QQNTKMKDRI----- 184
Query: 711 KGTVGYVAPEYGMGS 725
GT Y+APE G+
Sbjct: 185 -GTAYYIAPEVLRGT 198
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 118/277 (42%), Gaps = 37/277 (13%)
Query: 532 EFSSSNMIGQGSFGYVYKGTL---GEDEMI-VAVKVIN-LKYKGASRSFVAECEALRNIR 586
EF ++G G+FG VYKG GE I VA+K + A++ + E + ++
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
+ ++ +++ IC ++ + + + M G L D++ + D + L +N +
Sbjct: 77 NPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 125
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV---KT 703
+A M YL +VH DL NVL+ + DFGLAK L + + K
Sbjct: 126 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 182
Query: 704 PSSSIGLKGTVGYVAPE------YGMGSEASMTGDIFTGRRPIDAV-FNEGHSLHEFAKT 756
P + L+ + + YG+ MT G +P D + +E S+ E +
Sbjct: 183 PIKWMALESILHRIYTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGER 238
Query: 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECL 793
LP+ + +D + +M MI D R K E +
Sbjct: 239 -LPQPPICTIDVYM---IMVKCWMIDADSRPKFRELI 271
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 45/207 (21%)
Query: 539 IGQGSFGYVY-KGTLGEDE----MIVAVKVINLKYKGASRSF---VAECEALRNI-RHRN 589
+G+G+FG V +G D+ + V V LK + ++E E ++ I +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 590 LIKIITICSSTDFKGTDFKAFVF-EYMENGSLKDWL---------------HQSDDQVEV 633
+I ++ C+ D +V EY G+L+++L H ++Q
Sbjct: 85 IINLLGACTQ------DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ--- 135
Query: 634 CKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLS 693
LS V+ A VA MEYL +H DL NVL+ D V + DFGLA+ +
Sbjct: 136 --LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI- 189
Query: 694 DHQLDTAVKTPSSSIGLKGTVGYVAPE 720
H +D KT + + +K ++APE
Sbjct: 190 -HHIDYYKKTTNGRLPVK----WMAPE 211
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 46/226 (20%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLI 591
+F + +G G+ G V+K + +++A K+I+L+ K A+RN R L
Sbjct: 26 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK----------PAIRNQIIREL- 74
Query: 592 KIITICSS---TDFKGTDFK----AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNI 644
+++ C+S F G + + E+M+ GSL L ++ E ++ +V+I
Sbjct: 75 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVSI 130
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A V + YL + ++H D+KPSN+L++ +CDFG++ L D ++ V
Sbjct: 131 A--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV--- 183
Query: 705 SSSIGLKGTVGYVAPEYGMGSEASMTGDIFT----------GRRPI 740
GT Y++PE G+ S+ DI++ GR PI
Sbjct: 184 -------GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 118/277 (42%), Gaps = 37/277 (13%)
Query: 532 EFSSSNMIGQGSFGYVYKGTL---GEDEMI-VAVKVIN-LKYKGASRSFVAECEALRNIR 586
EF ++G G+FG VYKG GE I VA+K + A++ + E + ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
+ ++ +++ IC ++ + + + M G L D++ + D + L +N +
Sbjct: 78 NPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 126
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV---KT 703
+A M YL +VH DL NVL+ + DFGLAK L + + K
Sbjct: 127 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 183
Query: 704 PSSSIGLKGTVGYVAPE------YGMGSEASMTGDIFTGRRPIDAV-FNEGHSLHEFAKT 756
P + L+ + + YG+ MT G +P D + +E S+ E +
Sbjct: 184 PIKWMALESILHRIYTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGER 239
Query: 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECL 793
LP+ + +D + +M MI D R K E +
Sbjct: 240 -LPQPPICTIDVYM---IMVKCWMIDADSRPKFRELI 272
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 45/207 (21%)
Query: 539 IGQGSFGYVY-KGTLGEDE----MIVAVKVINLKYKGASRSF---VAECEALRNI-RHRN 589
+G+G+FG V +G D+ + V V LK + ++E E ++ I +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 590 LIKIITICSSTDFKGTDFKAFVF-EYMENGSLKDWL---------------HQSDDQVEV 633
+I ++ C+ D +V EY G+L+++L H ++Q
Sbjct: 88 IINLLGACTQ------DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ--- 138
Query: 634 CKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLS 693
LS V+ A VA MEYL +H DL NVL+ D V + DFGLA+ +
Sbjct: 139 --LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI- 192
Query: 694 DHQLDTAVKTPSSSIGLKGTVGYVAPE 720
H +D KT + + +K ++APE
Sbjct: 193 -HHIDYYKKTTNGRLPVK----WMAPE 214
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 118/277 (42%), Gaps = 37/277 (13%)
Query: 532 EFSSSNMIGQGSFGYVYKGTL---GEDEMI-VAVKVIN-LKYKGASRSFVAECEALRNIR 586
EF ++G G+FG VYKG GE I VA+K + A++ + E + ++
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
+ ++ +++ IC ++ + + + M G L D++ + D + L +N +
Sbjct: 77 NPHVCRLLGICLTSTVQ------LIMQLMPFGXLLDYVREHKDNIGSQYL-----LNWCV 125
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV---KT 703
+A M YL +VH DL NVL+ + DFGLAK L + + K
Sbjct: 126 QIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 182
Query: 704 PSSSIGLKGTVGYVAPE------YGMGSEASMTGDIFTGRRPIDAV-FNEGHSLHEFAKT 756
P + L+ + + YG+ MT G +P D + +E S+ E +
Sbjct: 183 PIKWMALESILHRIYTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGER 238
Query: 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECL 793
LP+ + +D + +M MI D R K E +
Sbjct: 239 -LPQPPICTIDVYM---IMVKCWMIDADSRPKFRELI 271
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 118/277 (42%), Gaps = 37/277 (13%)
Query: 532 EFSSSNMIGQGSFGYVYKGTL---GEDEMI-VAVKVIN-LKYKGASRSFVAECEALRNIR 586
EF ++G G+FG VYKG GE I VA+K + A++ + E + ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
+ ++ +++ IC ++ + + + M G L D++ + D + L +N +
Sbjct: 76 NPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 124
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV---KT 703
+A M YL +VH DL NVL+ + DFGLAK L + + K
Sbjct: 125 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 704 PSSSIGLKGTVGYVAPE------YGMGSEASMTGDIFTGRRPIDAV-FNEGHSLHEFAKT 756
P + L+ + + YG+ MT G +P D + +E S+ E +
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGER 237
Query: 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECL 793
LP+ + +D + +M MI D R K E +
Sbjct: 238 -LPQPPICTIDVYM---IMVKCWMIDADSRPKFRELI 270
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 89/214 (41%), Gaps = 35/214 (16%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVAECEALRNI 585
A +F +G+G FG VY + + I+A+KV+ L+ G E E ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLI--QRVN 643
RH N++++ F + EY G + E+ KLS QR
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPRGEVYK---------ELQKLSKFDEQRTA 116
Query: 644 IAI-DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVK 702
I ++A+A+ Y H ++H D+KP N+LL + DFG +V
Sbjct: 117 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVH 162
Query: 703 TPSS-SIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
PSS L GT+ Y+ PE G D+++
Sbjct: 163 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 196
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 46/226 (20%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLI 591
+F + +G G+ G V+K + +++A K+I+L+ K A+RN R L
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK----------PAIRNQIIREL- 55
Query: 592 KIITICSS---TDFKGTDFK----AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNI 644
+++ C+S F G + + E+M+ GSL L ++ E ++ +V+I
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVSI 111
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A V + YL + ++H D+KPSN+L++ +CDFG++ L D ++ V
Sbjct: 112 A--VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV--- 164
Query: 705 SSSIGLKGTVGYVAPEYGMGSEASMTGDIFT----------GRRPI 740
GT Y++PE G+ S+ DI++ GR PI
Sbjct: 165 -------GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 46/226 (20%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLI 591
+F + +G G+ G V+K + +++A K+I+L+ K A+RN R L
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK----------PAIRNQIIREL- 55
Query: 592 KIITICSS---TDFKGTDFK----AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNI 644
+++ C+S F G + + E+M+ GSL L ++ E ++ +V+I
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVSI 111
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A V + YL + ++H D+KPSN+L++ +CDFG++ L D ++ V
Sbjct: 112 A--VIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV--- 164
Query: 705 SSSIGLKGTVGYVAPEYGMGSEASMTGDIFT----------GRRPI 740
GT Y++PE G+ S+ DI++ GR PI
Sbjct: 165 -------GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+K I L + +G + + E L+ + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ + LK ++ S + L LI+ + +
Sbjct: 68 VKLLDVIH------TENKLYLVFEFL-SMDLKKFMDAS--ALTGIPLPLIK--SYLFQLL 116
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T +
Sbjct: 117 QGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEV- 167
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 168 --VTLWYRAPEILLGCKYYSTAVDIWS 192
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 26/179 (14%)
Query: 521 VSYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVAE 578
VS A + + + +G+G++G VYK VA+K I L++ +G + + E
Sbjct: 24 VSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIRE 83
Query: 579 CEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDD-QVEVCKLS 637
L+ ++HRN+I++ ++ +FEY EN LK ++ ++ D + V K
Sbjct: 84 VSLLKELQHRNIIELKSVIHH-----NHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSF 137
Query: 638 LIQRVNIAIDVASAMEYLH-HHCQPPMVHGDLKPSNVLL-----DHDMVAHVCDFGLAK 690
L Q +N + + H C +H DLKP N+LL V + DFGLA+
Sbjct: 138 LYQLIN-------GVNFCHSRRC----LHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+K I L + +G + + E L+ + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ + LK ++ S + L LI+ + +
Sbjct: 66 VKLLDVIH------TENKLYLVFEFL-SMDLKKFMDAS--ALTGIPLPLIK--SYLFQLL 114
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T +
Sbjct: 115 QGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR-----AFGVPVRTYXHEV- 165
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 166 --VTLWYRAPEILLGCKYYSTAVDIWS 190
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 25/187 (13%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRS----FVAECEALRNIRHRNLIKII 594
IG+GSF VYKG + E V V L+ + ++S F E E L+ ++H N+++
Sbjct: 34 IGRGSFKTVYKGL--DTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFY 91
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
ST KG V E +G+LK +L + +V K+ +++ + + +++
Sbjct: 92 DSWEST-VKGKKCIVLVTELXTSGTLKTYLKR----FKVXKIKVLR--SWCRQILKGLQF 144
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDM-VAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGT 713
LH PP++H DLK N+ + + D GLA +K S + + GT
Sbjct: 145 LHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLA----------TLKRASFAKAVIGT 193
Query: 714 VGYVAPE 720
+ APE
Sbjct: 194 PEFXAPE 200
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+K I L + +G + + E L+ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ LK ++ S + L LI+ + +
Sbjct: 64 VKLLDVIH------TENKLYLVFEHVHQ-DLKTFMDAS--ALTGIPLPLIK--SYLFQLL 112
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T + +
Sbjct: 113 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYTHEV- 163
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 164 --VTLWYRAPEILLGCKYYSTAVDIWS 188
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 18/176 (10%)
Query: 525 ELSKATGEFSSSNMIGQGSFGYVYKGTL-----GEDEMIVAVKVINLKYKGASR-SFVAE 578
E A + + S +GQGSFG VY+G E E VA+K +N R F+ E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 579 CEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVE----VC 634
++ ++++++ + S +G + E M G LK +L ++E +
Sbjct: 66 ASVMKEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 635 KLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690
SL + + +A ++A M YL+ + VH DL N + D + DFG+ +
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR 173
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 118/277 (42%), Gaps = 37/277 (13%)
Query: 532 EFSSSNMIGQGSFGYVYKGTL---GEDEMI-VAVKVIN-LKYKGASRSFVAECEALRNIR 586
EF ++G G+FG VYKG GE I VA+K + A++ + E + ++
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
+ ++ +++ IC ++ + + + M G L D++ + D + L +N +
Sbjct: 83 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 131
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV---KT 703
+A M YL +VH DL NVL+ + DFGLAK L + + K
Sbjct: 132 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 704 PSSSIGLKGTVGYVAPE------YGMGSEASMTGDIFTGRRPIDAV-FNEGHSLHEFAKT 756
P + L+ + + YG+ MT G +P D + +E S+ E +
Sbjct: 189 PIKWMALESILHRIYTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGER 244
Query: 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECL 793
LP+ + +D + +M MI D R K E +
Sbjct: 245 -LPQPPICTIDVYM---IMVKCWMIDADSRPKFRELI 277
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVAECEALRNI 585
A +F +G+G FG VY + + I+A+KV+ L+ G E E ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLI--QRVN 643
RH N++++ F + EY G++ E+ KLS QR
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR---------ELQKLSKFDEQRTA 116
Query: 644 IAI-DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVK 702
I ++A+A+ Y H ++H D+KP N+LL + DFG +V
Sbjct: 117 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVH 162
Query: 703 TPSS-SIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
PSS L GT+ Y+ PE G D+++
Sbjct: 163 APSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWS 196
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 118/277 (42%), Gaps = 37/277 (13%)
Query: 532 EFSSSNMIGQGSFGYVYKGTL---GEDEMI-VAVKVIN-LKYKGASRSFVAECEALRNIR 586
EF ++G G+FG VYKG GE I VA+K + A++ + E + ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
+ ++ +++ IC ++ + + + M G L D++ + D + L +N +
Sbjct: 79 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 127
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV---KT 703
+A M YL +VH DL NVL+ + DFGLAK L + + K
Sbjct: 128 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 704 PSSSIGLKGTVGYVAPE------YGMGSEASMTGDIFTGRRPIDAV-FNEGHSLHEFAKT 756
P + L+ + + YG+ MT G +P D + +E S+ E +
Sbjct: 185 PIKWMALESILHRIYTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGER 240
Query: 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECL 793
LP+ + +D + +M MI D R K E +
Sbjct: 241 -LPQPPICTIDVYM---IMVKCWMIDADSRPKFRELI 273
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 119/277 (42%), Gaps = 37/277 (13%)
Query: 532 EFSSSNMIGQGSFGYVYKG-TLGEDEMI---VAVKVIN-LKYKGASRSFVAECEALRNIR 586
EF ++G G+FG VYKG + E E + VA+K + A++ + E + ++
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
+ ++ +++ IC ++ + + + M G L D++ + D + L +N +
Sbjct: 101 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 149
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV---KT 703
+A M YL +VH DL NVL+ + DFGLAK L + + K
Sbjct: 150 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 206
Query: 704 PSSSIGLKGTVGYVAPE------YGMGSEASMTGDIFTGRRPIDAV-FNEGHSLHEFAKT 756
P + L+ + + YG+ MT G +P D + +E S+ E +
Sbjct: 207 PIKWMALESILHRIYTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGER 262
Query: 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECL 793
LP+ + +D + +M MI D R K E +
Sbjct: 263 -LPQPPICTIDVYM---IMVKCWMIDADSRPKFRELI 295
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 118/277 (42%), Gaps = 37/277 (13%)
Query: 532 EFSSSNMIGQGSFGYVYKGTL---GEDEMI-VAVKVIN-LKYKGASRSFVAECEALRNIR 586
EF ++G G+FG VYKG GE I VA+K + A++ + E + ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
+ ++ +++ IC ++ + + + M G L D++ + D + L +N +
Sbjct: 76 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 124
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV---KT 703
+A M YL +VH DL NVL+ + DFGLAK L + + K
Sbjct: 125 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 704 PSSSIGLKGTVGYVAPE------YGMGSEASMTGDIFTGRRPIDAV-FNEGHSLHEFAKT 756
P + L+ + + YG+ MT G +P D + +E S+ E +
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGER 237
Query: 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECL 793
LP+ + +D + +M MI D R K E +
Sbjct: 238 -LPQPPICTIDVYM---IMVKCWMIDADSRPKFRELI 270
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 118/277 (42%), Gaps = 37/277 (13%)
Query: 532 EFSSSNMIGQGSFGYVYKGTL---GEDEMI-VAVKVIN-LKYKGASRSFVAECEALRNIR 586
EF ++G G+FG VYKG GE I VA+K + A++ + E + ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
+ ++ +++ IC ++ + + + M G L D++ + D + L +N +
Sbjct: 79 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 127
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV---KT 703
+A M YL +VH DL NVL+ + DFGLAK L + + K
Sbjct: 128 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 704 PSSSIGLKGTVGYVAPE------YGMGSEASMTGDIFTGRRPIDAV-FNEGHSLHEFAKT 756
P + L+ + + YG+ MT G +P D + +E S+ E +
Sbjct: 185 PIKWMALESILHRIYTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGER 240
Query: 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECL 793
LP+ + +D + +M MI D R K E +
Sbjct: 241 -LPQPPICTIDVYM---IMVKCWMIDADSRPKFRELI 273
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 118/277 (42%), Gaps = 37/277 (13%)
Query: 532 EFSSSNMIGQGSFGYVYKGTL---GEDEMI-VAVKVIN-LKYKGASRSFVAECEALRNIR 586
EF ++G G+FG VYKG GE I VA+K + A++ + E + ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
+ ++ +++ IC ++ + + + M G L D++ + D + L +N +
Sbjct: 76 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 124
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV---KT 703
+A M YL +VH DL NVL+ + DFGLAK L + + K
Sbjct: 125 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 704 PSSSIGLKGTVGYVAPE------YGMGSEASMTGDIFTGRRPIDAV-FNEGHSLHEFAKT 756
P + L+ + + YG+ MT G +P D + +E S+ E +
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGER 237
Query: 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECL 793
LP+ + +D + +M MI D R K E +
Sbjct: 238 -LPQPPICTIDVYM---IMRKCWMIDADSRPKFRELI 270
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 119/277 (42%), Gaps = 37/277 (13%)
Query: 532 EFSSSNMIGQGSFGYVYKG-TLGEDEMI---VAVKVIN-LKYKGASRSFVAECEALRNIR 586
EF ++G G+FG VYKG + E E + VA+K + A++ + E + ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
+ ++ +++ IC ++ + + + M G L D++ + D + L +N +
Sbjct: 76 NPHVCRLLGICLTSTVQ------LITQLMPFGXLLDYVREHKDNIGSQYL-----LNWCV 124
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV---KT 703
+A M YL +VH DL NVL+ + DFGLAK L + + K
Sbjct: 125 QIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 704 PSSSIGLKGTVGYVAPE------YGMGSEASMTGDIFTGRRPIDAV-FNEGHSLHEFAKT 756
P + L+ + + YG+ MT G +P D + +E S+ E +
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGER 237
Query: 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECL 793
LP+ + +D + +M MI D R K E +
Sbjct: 238 -LPQPPICTIDVYM---IMVKCWMIDADSRPKFRELI 270
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVAECEALRNI 585
A +F +G+G FG VY + + I+A+KV+ L+ G E E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLI--QRVN 643
RH N++++ F + EY G++ E+ KLS QR
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR---------ELQKLSKFDEQRTA 114
Query: 644 IAI-DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVK 702
I ++A+A+ Y H ++H D+KP N+LL + DFG +V
Sbjct: 115 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVH 160
Query: 703 TPSS-SIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
PSS L GT+ Y+ PE G D+++
Sbjct: 161 APSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWS 194
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVAECEALRNI 585
A +F +G+G FG VY + + I+A+KV+ L+ G E E ++
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLI--QRVN 643
RH N++++ F + EY G++ E+ KLS QR
Sbjct: 92 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR---------ELQKLSKFDEQRTA 137
Query: 644 IAI-DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVK 702
I ++A+A+ Y H ++H D+KP N+LL + DFG +V
Sbjct: 138 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGW-----------SVH 183
Query: 703 TPSS-SIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
PSS L GT+ Y+ PE G D+++
Sbjct: 184 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 217
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+ I L + +G + + E L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ LK ++ S + L LI+ + +
Sbjct: 65 VKLLDVIH------TENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIK--SYLFQLL 113
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T + +
Sbjct: 114 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYTHEV- 164
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 165 --VTLWYRAPEILLGCKYYSTAVDIWS 189
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNL 590
F IG+G++G VYK +VA+ I L + +G + + E L+ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 591 IKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+K++ + T+ K + VFE++ LK ++ S + L LI+ + +
Sbjct: 64 VKLLDVIH------TENKLYLVFEFLHQ-DLKKFMDAS--ALTGIPLPLIK--SYLFQLL 112
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ + H H ++H DLKP N+L++ + + DFGLA+ V+T + +
Sbjct: 113 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR-----AFGVPVRTYTHEV- 163
Query: 710 LKGTVGYVAPEYGMGSEASMTG-DIFT 735
T+ Y APE +G + T DI++
Sbjct: 164 --VTLWYRAPEILLGCKYYSTAVDIWS 188
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 119/277 (42%), Gaps = 37/277 (13%)
Query: 532 EFSSSNMIGQGSFGYVYKG-TLGEDEMI---VAVKVIN-LKYKGASRSFVAECEALRNIR 586
EF ++G G+FG VYKG + E E + VA+K + A++ + E + ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
+ ++ +++ IC ++ + + + M G L D++ + D + L +N +
Sbjct: 78 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 126
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV---KT 703
+A M YL +VH DL NVL+ + DFGLAK L + + K
Sbjct: 127 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 183
Query: 704 PSSSIGLKGTVGYVAPE------YGMGSEASMTGDIFTGRRPIDAV-FNEGHSLHEFAKT 756
P + L+ + + YG+ MT G +P D + +E S+ E +
Sbjct: 184 PIKWMALESILHRIYTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGER 239
Query: 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECL 793
LP+ + +D + +M MI D R K E +
Sbjct: 240 -LPQPPICTIDVYM---IMVKCWMIDADSRPKFRELI 272
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 88/217 (40%), Gaps = 36/217 (16%)
Query: 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI----NLKYKGASRSFVAECEALRNIR 586
E + +IG G FG VY+ DE VAVK + + E + ++
Sbjct: 7 AELTLEEIIGIGGFGKVYRAFWIGDE--VAVKAARHDPDEDISQTIENVRQEAKLFAMLK 64
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
H N+I + +C K + V E+ G L L ++ VN A+
Sbjct: 65 HPNIIALRGVC----LKEPNL-CLVMEFARGGPLNRVLSGKRIPPDIL-------VNWAV 112
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM--------VAHVCDFGLAKFLSDHQLD 698
+A M YLH P++H DLK SN+L+ + + + DFGLA+ H+
Sbjct: 113 QIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR--EWHR-- 168
Query: 699 TAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
++ + G ++APE S S D+++
Sbjct: 169 ------TTKMSAAGAYAWMAPEVIRASMFSKGSDVWS 199
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 117/278 (42%), Gaps = 36/278 (12%)
Query: 512 SPMEKQFPMVSYAELSKA-----------TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVA 560
SP+ ++ ++ Y E +K +F +IG+G+FG V L + + A
Sbjct: 44 SPLRREKNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFA 103
Query: 561 VKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSL 620
+K++N K++ R+ A R++ K IT F+ + V +Y G L
Sbjct: 104 MKILN-KWEMLKRAETACFREERDVLVNGDSKWITTLHYA-FQDDNNLYLVMDYYVGGDL 161
Query: 621 KDWLHQSDDQV--EVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHD 678
L + +D++ E+ + L + V IAID + Y VH D+KP N+L+D +
Sbjct: 162 LTLLSKFEDRLPEEMARFYLAEMV-IAIDSVHQLHY---------VHRDIKPDNILMDMN 211
Query: 679 MVAHVCDFG-LAKFLSDH--QLDTAVKTP---SSSI--GLKGTVGYVAPEYGMGSEASMT 730
+ DFG K + D Q AV TP S I ++G G PE S
Sbjct: 212 GHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCM 271
Query: 731 GDIFTGRRPIDA---VFNEGHSLHEFAKTALPEKVMEI 765
++ G P A V G ++ + P +V ++
Sbjct: 272 YEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDV 309
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 118/277 (42%), Gaps = 37/277 (13%)
Query: 532 EFSSSNMIGQGSFGYVYKGTL---GEDEMI-VAVKVIN-LKYKGASRSFVAECEALRNIR 586
EF ++G G+FG VYKG GE I VA+K + A++ + E + ++
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
+ ++ +++ IC ++ + + + M G L D++ + D + L +N +
Sbjct: 82 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 130
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV---KT 703
+A M YL +VH DL NVL+ + DFGLAK L + + K
Sbjct: 131 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 187
Query: 704 PSSSIGLKGTVGYVAPE------YGMGSEASMTGDIFTGRRPIDAV-FNEGHSLHEFAKT 756
P + L+ + + YG+ MT G +P D + +E S+ E +
Sbjct: 188 PIKWMALESILHRIYTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGER 243
Query: 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECL 793
LP+ + +D + +M MI D R K E +
Sbjct: 244 -LPQPPICTIDVYM---IMVKCWMIDADSRPKFRELI 276
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVAECEALRNI 585
A +F +G+G FG VY + + I+A+KV+ L+ G E E ++
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLI--QRVN 643
RH N++++ F + EY G++ E+ KLS QR
Sbjct: 83 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR---------ELQKLSKFDEQRTA 128
Query: 644 IAI-DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVK 702
I ++A+A+ Y H ++H D+KP N+LL + DFG +V
Sbjct: 129 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVH 174
Query: 703 TPSS-SIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
PSS L GT+ Y+ PE G D+++
Sbjct: 175 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 208
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 118/277 (42%), Gaps = 37/277 (13%)
Query: 532 EFSSSNMIGQGSFGYVYKGTL---GEDEMI-VAVKVIN-LKYKGASRSFVAECEALRNIR 586
EF ++G G+FG VYKG GE I VA+K + A++ + E + ++
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
+ ++ +++ IC ++ + + + M G L D++ + D + L +N +
Sbjct: 73 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 121
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV---KT 703
+A M YL +VH DL NVL+ + DFGLAK L + + K
Sbjct: 122 QIAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 178
Query: 704 PSSSIGLKGTVGYVAPE------YGMGSEASMTGDIFTGRRPIDAV-FNEGHSLHEFAKT 756
P + L+ + + YG+ MT G +P D + +E S+ E +
Sbjct: 179 PIKWMALESILHRIYTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGER 234
Query: 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECL 793
LP+ + +D + +M MI D R K E +
Sbjct: 235 -LPQPPICTIDVYM---IMVKCWMIDADSRPKFRELI 267
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 120/273 (43%), Gaps = 29/273 (10%)
Query: 532 EFSSSNMIGQGSFGYVYKG-TLGEDEMI---VAVKVIN-LKYKGASRSFVAECEALRNIR 586
EF ++G G+FG VYKG + E E + VA+K + A++ + E + ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
+ ++ +++ IC ++ + + + M G L D++ + D + L +N +
Sbjct: 79 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 127
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV---KT 703
+A M YL +VH DL NVL+ + DFGLAK L + + K
Sbjct: 128 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 704 PSSSIGLKGTVGYV-APEYGMGSEASMTGDIFT-GRRPIDAV-FNEGHSLHEFAKTALPE 760
P + L+ + + + + S ++ T G +P D + +E S+ E + LP+
Sbjct: 185 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER-LPQ 243
Query: 761 KVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECL 793
+ +D + +M MI D R K E +
Sbjct: 244 PPICTIDVYM---IMRKCWMIDADSRPKFRELI 273
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 29/204 (14%)
Query: 537 NMIGQGSFGYV---YKGTLGEDE-MIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
+ +G+G+FG V LG++ +VAVK + R F E + L+ + ++K
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAM 652
+ G V EY+ +G L+D+L + +++ +L L + + M
Sbjct: 73 YRGVSYGP---GRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLY-----SSQICKGM 124
Query: 653 EYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
EYL C VH DL N+L++ + + DFGLAK L + V+ P S
Sbjct: 125 EYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQS---- 176
Query: 712 GTVGYVAPEYGMGSEASMTGDIFT 735
+ + APE S++ +IF+
Sbjct: 177 -PIFWYAPE-------SLSDNIFS 192
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
++ + +IG GSFG VY+ L + +VA+K + L+ K E + +R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQGKAFKNR---ELQIMRKLDHCNIVR 77
Query: 593 I-ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQ----VEVCKLSLIQRVNIAID 647
+ SS + K + V +Y+ + H S + V KL + Q
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 130
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVCDFGLAKFL 692
+ ++ Y+H + H D+KP N+LLD D V +CDFG AK L
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVAECEALRNI 585
A +F +G+G FG VY + + I+A+KV+ L+ G E E ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLI--QRVN 643
RH N++++ F + EY G++ E+ KLS QR
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR---------ELQKLSKFDEQRTA 116
Query: 644 IAI-DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVK 702
I ++A+A+ Y H ++H D+KP N+LL + DFG +V
Sbjct: 117 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVH 162
Query: 703 TPSS-SIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
PSS L GT+ Y+ PE G D+++
Sbjct: 163 APSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWS 196
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVAECEALRNI 585
A +F +G+G FG VY + + I+A+KV+ L+ G E E ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLI--QRVN 643
RH N++++ F + EY G++ E+ KLS QR
Sbjct: 67 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR---------ELQKLSKFDEQRTA 112
Query: 644 IAI-DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVK 702
I ++A+A+ Y H ++H D+KP N+LL + DFG +V
Sbjct: 113 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVH 158
Query: 703 TPSS-SIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
PSS L GT+ Y+ PE G D+++
Sbjct: 159 APSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWS 192
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVAECEALRNI 585
A +F +G+G FG VY + + I+A+KV+ L+ G E E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLI--QRVN 643
RH N++++ F + EY G++ E+ KLS QR
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR---------ELQKLSKFDEQRTA 111
Query: 644 IAI-DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVK 702
I ++A+A+ Y H ++H D+KP N+LL + DFG +V
Sbjct: 112 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVH 157
Query: 703 TPSS-SIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
PSS L GT+ Y+ PE G D+++
Sbjct: 158 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 191
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVAECEALRNI 585
A +F +G+G FG VY + + I+A+KV+ L+ G E E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLI--QRVN 643
RH N++++ F + EY G++ E+ KLS QR
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR---------ELQKLSKFDEQRTA 114
Query: 644 IAI-DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVK 702
I ++A+A+ Y H ++H D+KP N+LL + DFG +V
Sbjct: 115 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVH 160
Query: 703 TPSS-SIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
PSS L GT+ Y+ PE G D+++
Sbjct: 161 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 194
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
++ + +IG GSFG VY+ L + +VA+K + L+ K E + +R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQGKAFKNR---ELQIMRKLDHCNIVR 77
Query: 593 I-ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQ----VEVCKLSLIQRVNIAID 647
+ SS + K + V +Y+ + H S + V KL + Q
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ------- 130
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVCDFGLAKFL 692
+ ++ Y+H + H D+KP N+LLD D V +CDFG AK L
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 118/277 (42%), Gaps = 37/277 (13%)
Query: 532 EFSSSNMIGQGSFGYVYKGTL---GEDEMI-VAVKVIN-LKYKGASRSFVAECEALRNIR 586
EF ++G G+FG VYKG GE I VA+K + A++ + E + ++
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
+ ++ +++ IC ++ + + + M G L D++ + D + L +N +
Sbjct: 70 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 118
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV---KT 703
+A M YL +VH DL NVL+ + DFGLAK L + + K
Sbjct: 119 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 175
Query: 704 PSSSIGLKGTVGYVAPE------YGMGSEASMTGDIFTGRRPIDAV-FNEGHSLHEFAKT 756
P + L+ + + YG+ MT G +P D + +E S+ E +
Sbjct: 176 PIKWMALESILHRIYTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGER 231
Query: 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECL 793
LP+ + +D + +M MI D R K E +
Sbjct: 232 -LPQPPICTIDVYM---IMVKCWMIDADSRPKFRELI 264
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVAECEALRNI 585
A +F +G+G FG VY + + I+A+KV+ L+ G E E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLI--QRVN 643
RH N++++ F + EY G++ E+ KLS QR
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR---------ELQKLSKFDEQRTA 111
Query: 644 IAI-DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVK 702
I ++A+A+ Y H ++H D+KP N+LL + DFG +V
Sbjct: 112 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVH 157
Query: 703 TPSS-SIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
PSS L GT+ Y+ PE G D+++
Sbjct: 158 APSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWS 191
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 27/192 (14%)
Query: 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIIT 595
+ +G+G++ VYKG + +VA+K I L+++ GA + + E L++++H N++ +
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 596 ICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEV--CKLSLIQRVNIAIDVASAME 653
I + VFEY++ LK +L + + + KL L Q + +
Sbjct: 68 IIHTEKSL-----TLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQ-------LLRGLA 114
Query: 654 YLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGT 713
Y H + ++H DLKP N+L++ + DFGLA+ S KT + + T
Sbjct: 115 YCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKS-----IPTKTYDNEV---VT 163
Query: 714 VGYVAPEYGMGS 725
+ Y P+ +GS
Sbjct: 164 LWYRPPDILLGS 175
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVAECEALRNI 585
A +F +G+G FG VY + + I+A+KV+ L+ G E E ++
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLI--QRVN 643
RH N++++ F + EY G++ E+ KLS QR
Sbjct: 92 RHPNILRLYGY-----FHDATRVYLILEYAPLGTV---------YRELQKLSKFDEQRTA 137
Query: 644 IAI-DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVK 702
I ++A+A+ Y H ++H D+KP N+LL + DFG +V
Sbjct: 138 TYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGW-----------SVH 183
Query: 703 TPSSSI-GLKGTVGYVAPEYGMGSEASMTGDIFT 735
PSS L GT+ Y+ PE G D+++
Sbjct: 184 APSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWS 217
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVAECEALRNI 585
A +F +G+G FG VY + + I+A+KV+ L+ G E E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLI--QRVN 643
RH N++++ F + EY G++ E+ KLS QR
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR---------ELQKLSKFDEQRTA 111
Query: 644 IAI-DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVK 702
I ++A+A+ Y H ++H D+KP N+LL + DFG +V
Sbjct: 112 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVH 157
Query: 703 TPSS-SIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
PSS L GT+ Y+ PE G D+++
Sbjct: 158 APSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWS 191
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 118/277 (42%), Gaps = 37/277 (13%)
Query: 532 EFSSSNMIGQGSFGYVYKGTL---GEDEMI-VAVKVIN-LKYKGASRSFVAECEALRNIR 586
EF ++G G+FG VYKG GE I VA+K + A++ + E + ++
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
+ ++ +++ IC ++ + + + M G L D++ + D + L +N +
Sbjct: 86 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 134
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV---KT 703
+A M YL +VH DL NVL+ + DFGLAK L + + K
Sbjct: 135 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 191
Query: 704 PSSSIGLKGTVGYVAPE------YGMGSEASMTGDIFTGRRPIDAV-FNEGHSLHEFAKT 756
P + L+ + + YG+ MT G +P D + +E S+ E +
Sbjct: 192 PIKWMALESILHRIYTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGER 247
Query: 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECL 793
LP+ + +D + +M MI D R K E +
Sbjct: 248 -LPQPPICTIDVYM---IMRKCWMIDADSRPKFRELI 280
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 87/197 (44%), Gaps = 35/197 (17%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMI---VAVKVIN---LKYKGASRSFVAECEALRNIR 586
+ ++G+GSFG V L +D++ AVKVI+ +K K S + E + L+ +
Sbjct: 52 YKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
H N++K+ F+ + V E G L D + + + S + I
Sbjct: 109 HPNIMKLYEF-----FEDKGYFYLVGEVYTGGELFDEI------ISRKRFSEVDAARIIR 157
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVCDFGLAKFLSDHQLDTAVKT 703
V S + Y+H + +VH DLKP N+LL+ D + DFGL+ A K
Sbjct: 158 QVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE------ASKK 208
Query: 704 PSSSIGLKGTVGYVAPE 720
I GT Y+APE
Sbjct: 209 MKDKI---GTAYYIAPE 222
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVAECEALRNI 585
A +F +G+G FG VY + + I+A+KV+ L+ G E E ++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLI--QRVN 643
RH N++++ F + EY G++ E+ KLS QR
Sbjct: 68 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR---------ELQKLSKFDEQRTA 113
Query: 644 IAI-DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVK 702
I ++A+A+ Y H ++H D+KP N+LL + DFG +V
Sbjct: 114 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVH 159
Query: 703 TPSS-SIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
PSS L GT+ Y+ PE G D+++
Sbjct: 160 APSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWS 193
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 35/200 (17%)
Query: 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMI---VAVKVIN---LKYKGASRSFVAECEALR 583
+ + ++G+GSFG V L +D++ AVKVI+ +K K S + E + L+
Sbjct: 25 SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 584 NIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVN 643
+ H N++K+ F+ + V E G L D+ + + S +
Sbjct: 82 QLDHPNIMKLYEF-----FEDKGYFYLVGEVYTGGEL------FDEIISRKRFSEVDAAR 130
Query: 644 IAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVCDFGLAKFLSDHQLDTA 700
I V S + Y+H + +VH DLKP N+LL+ D + DFGL+ A
Sbjct: 131 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE------A 181
Query: 701 VKTPSSSIGLKGTVGYVAPE 720
K I GT Y+APE
Sbjct: 182 SKKMKDKI---GTAYYIAPE 198
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 35/200 (17%)
Query: 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMI---VAVKVIN---LKYKGASRSFVAECEALR 583
+ + ++G+GSFG V L +D++ AVKVI+ +K K S + E + L+
Sbjct: 31 SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 87
Query: 584 NIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVN 643
+ H N++K+ F+ + V E G L D+ + + S +
Sbjct: 88 QLDHPNIMKLYEF-----FEDKGYFYLVGEVYTGGEL------FDEIISRKRFSEVDAAR 136
Query: 644 IAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVCDFGLAKFLSDHQLDTA 700
I V S + Y+H + +VH DLKP N+LL+ D + DFGL+ A
Sbjct: 137 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE------A 187
Query: 701 VKTPSSSIGLKGTVGYVAPE 720
K I GT Y+APE
Sbjct: 188 SKKMKDKI---GTAYYIAPE 204
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 87/197 (44%), Gaps = 35/197 (17%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMI---VAVKVIN---LKYKGASRSFVAECEALRNIR 586
+ ++G+GSFG V L +D++ AVKVI+ +K K S + E + L+ +
Sbjct: 51 YKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
H N++K+ F+ + V E G L D+ + + S + I
Sbjct: 108 HPNIMKLYEF-----FEDKGYFYLVGEVYTGGEL------FDEIISRKRFSEVDAARIIR 156
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVCDFGLAKFLSDHQLDTAVKT 703
V S + Y+H + +VH DLKP N+LL+ D + DFGL+ A K
Sbjct: 157 QVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE------ASKK 207
Query: 704 PSSSIGLKGTVGYVAPE 720
I GT Y+APE
Sbjct: 208 MKDKI---GTAYYIAPE 221
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 81/200 (40%), Gaps = 31/200 (15%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLI 591
+F +IG G FG V+K D +K + + A R E +AL + H N++
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIV 67
Query: 592 KIITICSSTDFK-----------GTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQ 640
D+ T E+ + G+L+ W+ + + KL +
Sbjct: 68 HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE----KLDKVL 123
Query: 641 RVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTA 700
+ + + ++Y+H +++ DLKPSN+ L + DFGL T+
Sbjct: 124 ALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLV---------TS 171
Query: 701 VKTPSSSIGLKGTVGYVAPE 720
+K KGT+ Y++PE
Sbjct: 172 LKNDGKRXRSKGTLRYMSPE 191
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 90/213 (42%), Gaps = 35/213 (16%)
Query: 528 KATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRH 587
+ +F ++GQG+FG V K D A+K I + S + ++E L ++ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS-TILSEVMLLASLNH 61
Query: 588 -------------RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVC 634
RN +K +T K T F EY EN +L D +H + +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKK---KSTLF--IQMEYCENRTLYDLIHSENLNQQRD 116
Query: 635 KLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK---- 690
+ + R + A+ Y+H ++H DLKP N+ +D + DFGLAK
Sbjct: 117 EYWRLFR-----QILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHR 168
Query: 691 FLSDHQLDTAVKTPSSSIGLKGTVG---YVAPE 720
L +LD+ P SS L +G YVA E
Sbjct: 169 SLDILKLDSQ-NLPGSSDNLTSAIGTAMYVATE 200
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVAECEALRNI 585
A +F +G+G FG VY + + I+A+KV+ L+ G E E ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLI--QRVN 643
RH N++++ F + EY G++ E+ KLS QR
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR---------ELQKLSKFDEQRTA 116
Query: 644 IAI-DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVK 702
I ++A+A+ Y H ++H D+KP N+LL + DFG +V
Sbjct: 117 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVH 162
Query: 703 TPSS-SIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
PSS L GT+ Y+ PE G D+++
Sbjct: 163 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 196
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
++ + +IG GSFG VY+ L + +VA+K + L+ K E + +R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQGKAFKNR---ELQIMRKLDHCNIVR 77
Query: 593 I-ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQ----VEVCKLSLIQRVNIAID 647
+ SS + K + V +Y+ + H S + V KL + Q
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQ------- 130
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVCDFGLAKFL 692
+ ++ Y+H + H D+KP N+LLD D V +CDFG AK L
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVAECEALRNI 585
A +F +G+G FG VY + + I+A+KV+ L+ G E E ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLI--QRVN 643
RH N++++ F + EY G++ E+ KLS QR
Sbjct: 67 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR---------ELQKLSKFDEQRTA 112
Query: 644 IAI-DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVK 702
I ++A+A+ Y H ++H D+KP N+LL + DFG +V
Sbjct: 113 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVH 158
Query: 703 TPSSSIG-LKGTVGYVAPEYGMGSEASMTGDIFT 735
PSS L GT+ Y+ PE G D+++
Sbjct: 159 APSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWS 192
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 30/202 (14%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNIRHRNLIKIITI 596
IG+G++G VYK E A+K I L+ + G + + E L+ ++H N++K+ +
Sbjct: 10 IGEGTYGVVYKAQNNYGETF-ALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 597 CSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCK--LSLIQRVNIAIDVASAMEY 654
+ VFE+++ LK L +VC+ L + + + + + + Y
Sbjct: 69 IHTKKRL-----VLVFEHLDQ-DLKKLL-------DVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
H ++H DLKP N+L++ + + DFGLA+ V+ + I T+
Sbjct: 116 CHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFG-----IPVRKYTHEI---VTL 164
Query: 715 GYVAPEYGMGSEA-SMTGDIFT 735
Y AP+ MGS+ S T DI++
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWS 186
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 16/183 (8%)
Query: 535 SSNMIGQGSFGYVYKGTL---GEDEMIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNL 590
S +IG+G FG VY G ++ + A+K ++ + +F+ E +R + H N+
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVAS 650
+ +I I + + YM +G L ++ V L ++ + VA
Sbjct: 85 LALIGIMLPPE----GLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL-----ISFGLQVAR 135
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
MEYL + VH DL N +LD V DFGLA+ + D + + + + + +
Sbjct: 136 GMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPV 192
Query: 711 KGT 713
K T
Sbjct: 193 KWT 195
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 86/213 (40%), Gaps = 44/213 (20%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLI 591
+F +IG G FG V+K D ++ + + A R E +AL + H N++
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER----EVKALAKLDHVNIV 68
Query: 592 KIITICSSTDF---------KGTDFKA--------------FV-FEYMENGSLKDWLHQS 627
D+ + +D+ F+ E+ + G+L+ W+ +
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 628 DDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687
+ KL + + + + ++Y+H ++H DLKPSN+ L + DFG
Sbjct: 129 RGE----KLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFG 181
Query: 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
L T++K KGT+ Y++PE
Sbjct: 182 LV---------TSLKNDGKRTRSKGTLRYMSPE 205
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 89/214 (41%), Gaps = 35/214 (16%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVAECEALRNI 585
A +F +G+G FG VY + + I+A+KV+ L+ G E E ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLI--QRVN 643
RH N++++ F + EY G++ E+ KLS QR
Sbjct: 67 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR---------ELQKLSKFDEQRTA 112
Query: 644 IAI-DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVK 702
I ++A+A+ Y H ++H D+KP N+LL + DFG +
Sbjct: 113 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SCH 158
Query: 703 TPSS-SIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
PSS L GT+ Y+ PE G D+++
Sbjct: 159 APSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWS 192
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 106/251 (42%), Gaps = 32/251 (12%)
Query: 513 PMEKQFPMVSYAELSKATGEFSSSNMIGQGSFGYVYKGTL-----GEDEMIVAVKVINLK 567
P+ Q E+S + F +G+ FG VYKG L GE VA+K + K
Sbjct: 10 PLINQHKQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDK 67
Query: 568 YKGASRS-FVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWL-- 624
+G R F E ++H N++ ++ + + + +F Y +G L ++L
Sbjct: 68 AEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPL-----SMIFSYCSHGDLHEFLVM 122
Query: 625 --------HQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLD 676
DD+ L V++ +A+ MEYL H +VH DL NVL+
Sbjct: 123 RSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVY 179
Query: 677 HDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTG 736
+ + D GL F + D +S + ++ ++APE M + S+ DI++
Sbjct: 180 DKLNVKISDLGL--FREVYAADYYKLLGNSLLPIR----WMAPEAIMYGKFSIDSDIWSY 233
Query: 737 RRPIDAVFNEG 747
+ VF+ G
Sbjct: 234 GVVLWEVFSYG 244
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 118/277 (42%), Gaps = 37/277 (13%)
Query: 532 EFSSSNMIGQGSFGYVYKG-TLGEDEMI---VAVKVIN-LKYKGASRSFVAECEALRNIR 586
EF ++G G+FG VYKG + E E + VA+K + A++ + E + ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
+ ++ +++ IC ++ + + + M G L D++ + D + L +N +
Sbjct: 78 NPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 126
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV---KT 703
+A M YL +VH DL NVL+ + DFG AK L + + K
Sbjct: 127 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183
Query: 704 PSSSIGLKGTVGYVAPE------YGMGSEASMTGDIFTGRRPIDAV-FNEGHSLHEFAKT 756
P + L+ + + YG+ MT G +P D + +E S+ E +
Sbjct: 184 PIKWMALESILHRIYTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGER 239
Query: 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECL 793
LP+ + +D + +M MI D R K E +
Sbjct: 240 -LPQPPICTIDVYM---IMVKCWMIDADSRPKFRELI 272
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 117/277 (42%), Gaps = 37/277 (13%)
Query: 532 EFSSSNMIGQGSFGYVYKGTL---GEDEMI-VAVKVIN-LKYKGASRSFVAECEALRNIR 586
EF ++G G+FG VYKG GE I VA+K + A++ + E + ++
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
+ ++ +++ IC ++ + + + M G L D++ + D + L +N +
Sbjct: 80 NPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 128
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV---KT 703
+A M YL +VH DL NVL+ + DFG AK L + + K
Sbjct: 129 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 185
Query: 704 PSSSIGLKGTVGYVAPE------YGMGSEASMTGDIFTGRRPIDAV-FNEGHSLHEFAKT 756
P + L+ + + YG+ MT G +P D + +E S+ E +
Sbjct: 186 PIKWMALESILHRIYTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGER 241
Query: 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECL 793
LP+ + +D + +M MI D R K E +
Sbjct: 242 -LPQPPICTIDVYM---IMVKCWMIDADSRPKFRELI 274
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 117/277 (42%), Gaps = 37/277 (13%)
Query: 532 EFSSSNMIGQGSFGYVYKGTL---GEDEMI-VAVKVIN-LKYKGASRSFVAECEALRNIR 586
EF ++ G+FG VYKG GE I VA+K + A++ + E + ++
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
+ ++ +++ IC ++ + + + M G L D++ + D + L +N +
Sbjct: 83 NPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 131
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV---KT 703
+A M YL +VH DL NVL+ + DFGLAK L + + K
Sbjct: 132 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 704 PSSSIGLKGTVGYVAPE------YGMGSEASMTGDIFTGRRPIDAV-FNEGHSLHEFAKT 756
P + L+ + + YG+ MT G +P D + +E S+ E +
Sbjct: 189 PIKWMALESILHRIYTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGER 244
Query: 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECL 793
LP+ + +D + +M MI D R K E +
Sbjct: 245 -LPQPPICTIDVYM---IMVKCWMIDADSRPKFRELI 277
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 20/177 (11%)
Query: 525 ELSKATGEFSSSNMIGQGSFGYVYKGTL-----GEDEMIVAVKVINLKYKGASR-SFVAE 578
E A + + S +GQGSFG VY+G E E VA+K +N R F+ E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 579 CEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQ-----SDDQVEV 633
++ ++++++ + S +G + E M G LK +L +++ V +
Sbjct: 79 ASVMKEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLRSLRPAMANNPV-L 132
Query: 634 CKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690
SL + + +A ++A M YL+ + VH DL N ++ D + DFG+ +
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 92/202 (45%), Gaps = 39/202 (19%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK---GASRS------FVAECEAL 582
E+ S +G G+ G V + VA+K+I+ K K G++R E E L
Sbjct: 10 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIIS-KRKFAIGSAREADPALNVETEIEIL 68
Query: 583 RNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEV-CKLSLIQR 641
+ + H +IKI + D+ V E ME G L D + + E CKL Q
Sbjct: 69 KKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ- 121
Query: 642 VNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVCDFGLAKFLSDHQLD 698
+ A++YLH + ++H DLKP NVLL + D + + DFG +K L + L
Sbjct: 122 ------MLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL- 171
Query: 699 TAVKTPSSSIGLKGTVGYVAPE 720
++T L GT Y+APE
Sbjct: 172 --MRT------LCGTPTYLAPE 185
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 98/239 (41%), Gaps = 53/239 (22%)
Query: 532 EFSSSNMIGQGSFGYV-----------YKGTLGEDEMIVAVKVINLKYKGASRSFVAECE 580
EF ++G+G+FG V Y + + E+IVA K + E
Sbjct: 9 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA--------KDEVAHTLTENR 60
Query: 581 ALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQ 640
L+N RH L + F+ D FV EY G L + H S ++V S +
Sbjct: 61 VLQNSRHPFLTAL-----KYSFQTHDRLCFVMEYANGGEL--FFHLSRERV----FSEDR 109
Query: 641 RVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTA 700
++ SA++YLH + +V+ DLK N++LD D + DFGL K
Sbjct: 110 ARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--------EG 159
Query: 701 VKTPSSSIGLKGTVGYVAPE------YGMGSEASMTG----DIFTGRRPIDAVFNEGHS 749
+K ++ GT Y+APE YG + G ++ GR P +N+ H
Sbjct: 160 IKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF---YNQDHE 215
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 92/202 (45%), Gaps = 39/202 (19%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK---GASRS------FVAECEAL 582
E+ S +G G+ G V + VA+K+I+ K K G++R E E L
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIIS-KRKFAIGSAREADPALNVETEIEIL 69
Query: 583 RNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEV-CKLSLIQR 641
+ + H +IKI + D+ V E ME G L D + + E CKL Q
Sbjct: 70 KKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ- 122
Query: 642 VNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVCDFGLAKFLSDHQLD 698
+ A++YLH + ++H DLKP NVLL + D + + DFG +K L + L
Sbjct: 123 ------MLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL- 172
Query: 699 TAVKTPSSSIGLKGTVGYVAPE 720
++T L GT Y+APE
Sbjct: 173 --MRT------LCGTPTYLAPE 186
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 96/202 (47%), Gaps = 30/202 (14%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNIRHRNLIKIITI 596
IG+G++G VYK E A+K I L+ + G + + E L+ ++H N++K+ +
Sbjct: 10 IGEGTYGVVYKAQNNYGETF-ALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 597 CSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCK--LSLIQRVNIAIDVASAMEY 654
+ VFE+++ LK L +VC+ L + + + + + + Y
Sbjct: 69 IHTKKRL-----VLVFEHLDQ-DLKKLL-------DVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
H ++H DLKP N+L++ + + DFGLA+ V+ + + T+
Sbjct: 116 CHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFG-----IPVRKYTHEV---VTL 164
Query: 715 GYVAPEYGMGSEA-SMTGDIFT 735
Y AP+ MGS+ S T DI++
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWS 186
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 92/202 (45%), Gaps = 39/202 (19%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK---GASRS------FVAECEAL 582
E+ S +G G+ G V + VA+K+I+ K K G++R E E L
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIIS-KRKFAIGSAREADPALNVETEIEIL 69
Query: 583 RNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEV-CKLSLIQR 641
+ + H +IKI + D+ V E ME G L D + + E CKL Q
Sbjct: 70 KKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ- 122
Query: 642 VNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVCDFGLAKFLSDHQLD 698
+ A++YLH + ++H DLKP NVLL + D + + DFG +K L + L
Sbjct: 123 ------MLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL- 172
Query: 699 TAVKTPSSSIGLKGTVGYVAPE 720
++T L GT Y+APE
Sbjct: 173 --MRT------LCGTPTYLAPE 186
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 118/277 (42%), Gaps = 37/277 (13%)
Query: 532 EFSSSNMIGQGSFGYVYKG-TLGEDEMI---VAVKVIN-LKYKGASRSFVAECEALRNIR 586
EF ++G G+FG VYKG + E E + VA+K + A++ + E + ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
+ ++ +++ IC ++ + + + M G L D++ + D + L +N +
Sbjct: 78 NPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 126
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV---KT 703
+A M YL +VH DL NVL+ + DFG AK L + + K
Sbjct: 127 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183
Query: 704 PSSSIGLKGTVGYVAPE------YGMGSEASMTGDIFTGRRPIDAV-FNEGHSLHEFAKT 756
P + L+ + + YG+ MT G +P D + +E S+ E +
Sbjct: 184 PIKWMALESILHRIYTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGER 239
Query: 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECL 793
LP+ + +D + +M MI D R K E +
Sbjct: 240 -LPQPPICTIDVYM---IMRKCWMIDADSRPKFRELI 272
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 92/202 (45%), Gaps = 39/202 (19%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK---GASRS------FVAECEAL 582
E+ S +G G+ G V + VA+K+I+ K K G++R E E L
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIIS-KRKFAIGSAREADPALNVETEIEIL 69
Query: 583 RNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEV-CKLSLIQR 641
+ + H +IKI + D+ V E ME G L D + + E CKL Q
Sbjct: 70 KKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ- 122
Query: 642 VNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVCDFGLAKFLSDHQLD 698
+ A++YLH + ++H DLKP NVLL + D + + DFG +K L + L
Sbjct: 123 ------MLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL- 172
Query: 699 TAVKTPSSSIGLKGTVGYVAPE 720
++T L GT Y+APE
Sbjct: 173 --MRT------LCGTPTYLAPE 186
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 512 SPMEKQFPMVSYAELSKATGE-FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG 570
+P +Q + L+K E F +G+GS+G VYK E IVA+K + ++
Sbjct: 9 NPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--S 66
Query: 571 ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQ 630
+ + E ++ +++K + FK TD V EY GS+ D + +
Sbjct: 67 DLQEIIKEISIMQQCDSPHVVKYY----GSYFKNTDL-WIVMEYCGAGSVSDIIRLRNKT 121
Query: 631 VEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690
+ +++ I + + +EYLH + +H D+K N+LL+ + A + DFG+A
Sbjct: 122 LTEDEIATILQSTL-----KGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAG 173
Query: 691 FLSD 694
L+D
Sbjct: 174 QLTD 177
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 29/204 (14%)
Query: 537 NMIGQGSFGYV---YKGTLGEDE-MIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
+ +G+G+FG V LG++ +VAVK + R F E + L+ + ++K
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAM 652
+ G V EY+ +G L+D+L + +++ +L L + + M
Sbjct: 76 YRGVSYGP---GRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLY-----SSQICKGM 127
Query: 653 EYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
EYL C VH DL N+L++ + + DFGLAK L + V+ P S
Sbjct: 128 EYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS---- 179
Query: 712 GTVGYVAPEYGMGSEASMTGDIFT 735
+ + APE S++ +IF+
Sbjct: 180 -PIFWYAPE-------SLSDNIFS 195
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 92/202 (45%), Gaps = 39/202 (19%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK---GASRS------FVAECEAL 582
E+ S +G G+ G V + VA+K+I+ K K G++R E E L
Sbjct: 17 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIIS-KRKFAIGSAREADPALNVETEIEIL 75
Query: 583 RNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEV-CKLSLIQR 641
+ + H +IKI + D+ V E ME G L D + + E CKL Q
Sbjct: 76 KKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ- 128
Query: 642 VNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVCDFGLAKFLSDHQLD 698
+ A++YLH + ++H DLKP NVLL + D + + DFG +K L + L
Sbjct: 129 ------MLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL- 178
Query: 699 TAVKTPSSSIGLKGTVGYVAPE 720
++T L GT Y+APE
Sbjct: 179 --MRT------LCGTPTYLAPE 192
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 91/218 (41%), Gaps = 32/218 (14%)
Query: 524 AELSKAT---GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVA 577
AE+ K +F +G+G FG VY +++ I+A+KV+ L+ +G
Sbjct: 5 AEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR 64
Query: 578 ECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLS 637
E E ++RH N++++ F + E+ G L L + E +
Sbjct: 65 EIEIQSHLRHPNILRMYNY-----FHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSAT 119
Query: 638 LIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQL 697
++ ++A A+ Y H + ++H D+KP N+L+ + + DFG
Sbjct: 120 FME------ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGW--------- 161
Query: 698 DTAVKTPS-SSIGLKGTVGYVAPEYGMGSEASMTGDIF 734
+V PS + GT+ Y+ PE G D++
Sbjct: 162 --SVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLW 197
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 102/250 (40%), Gaps = 27/250 (10%)
Query: 510 DTSPMEKQFPMVSYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
D +EK +VS + K F IGQG+ G VY VA++ +NL+ +
Sbjct: 2 DEEILEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQ 58
Query: 570 GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDD 629
+ E +R ++ N++ + + D V EY+ GSL D +
Sbjct: 59 PKKELIINEILVMRENKNPNIVNYLD-----SYLVGDELWVVMEYLAGGSLTDVV----- 108
Query: 630 QVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689
E C + Q + + A+E+LH + ++H D+K N+LL D + DFG
Sbjct: 109 -TETC-MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC 163
Query: 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT-GRRPIDAVFNEGH 748
++ Q S + GT ++APE DI++ G I+ + E
Sbjct: 164 AQITPEQ--------SKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
Query: 749 SLHEFAKTAL 758
L+E AL
Sbjct: 216 YLNENPLRAL 225
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 29/204 (14%)
Query: 537 NMIGQGSFGYV---YKGTLGEDE-MIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
+ +G+G+FG V LG++ +VAVK + R F E + L+ + ++K
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAM 652
+ G V EY+ +G L+D+L + +++ +L L + + M
Sbjct: 77 YRGVSYGP---GRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLY-----SSQICKGM 128
Query: 653 EYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
EYL C VH DL N+L++ + + DFGLAK L + V+ P S
Sbjct: 129 EYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS---- 180
Query: 712 GTVGYVAPEYGMGSEASMTGDIFT 735
+ + APE S++ +IF+
Sbjct: 181 -PIFWYAPE-------SLSDNIFS 196
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 98/239 (41%), Gaps = 53/239 (22%)
Query: 532 EFSSSNMIGQGSFGYV-----------YKGTLGEDEMIVAVKVINLKYKGASRSFVAECE 580
EF ++G+G+FG V Y + + E+IVA K + E
Sbjct: 10 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA--------KDEVAHTLTENR 61
Query: 581 ALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQ 640
L+N RH L + F+ D FV EY G L + H S ++V S +
Sbjct: 62 VLQNSRHPFLTAL-----KYSFQTHDRLCFVMEYANGGEL--FFHLSRERV----FSEDR 110
Query: 641 RVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTA 700
++ SA++YLH + +V+ DLK N++LD D + DFGL K
Sbjct: 111 ARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--------EG 160
Query: 701 VKTPSSSIGLKGTVGYVAPE------YGMGSEASMTG----DIFTGRRPIDAVFNEGHS 749
+K ++ GT Y+APE YG + G ++ GR P +N+ H
Sbjct: 161 IKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF---YNQDHE 216
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 91/218 (41%), Gaps = 32/218 (14%)
Query: 524 AELSKAT---GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVA 577
AE+ K +F +G+G FG VY +++ I+A+KV+ L+ +G
Sbjct: 4 AEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR 63
Query: 578 ECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLS 637
E E ++RH N++++ F + E+ G L L + E +
Sbjct: 64 EIEIQSHLRHPNILRMYNY-----FHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSAT 118
Query: 638 LIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQL 697
++ ++A A+ Y H + ++H D+KP N+L+ + + DFG
Sbjct: 119 FME------ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGW--------- 160
Query: 698 DTAVKTPS-SSIGLKGTVGYVAPEYGMGSEASMTGDIF 734
+V PS + GT+ Y+ PE G D++
Sbjct: 161 --SVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLW 196
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 96/202 (47%), Gaps = 30/202 (14%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNIRHRNLIKIITI 596
IG+G++G VYK E A+K I L+ + G + + E L+ ++H N++K+ +
Sbjct: 10 IGEGTYGVVYKAQNNYGETF-ALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 597 CSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCK--LSLIQRVNIAIDVASAMEY 654
+ VFE+++ LK L +VC+ L + + + + + + Y
Sbjct: 69 IHTKKRL-----VLVFEHLDQ-DLKKLL-------DVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
H ++H DLKP N+L++ + + DFGLA+ V+ + + T+
Sbjct: 116 CHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFG-----IPVRKYTHEV---VTL 164
Query: 715 GYVAPEYGMGSEA-SMTGDIFT 735
Y AP+ MGS+ S T DI++
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWS 186
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 98/239 (41%), Gaps = 53/239 (22%)
Query: 532 EFSSSNMIGQGSFGYV-----------YKGTLGEDEMIVAVKVINLKYKGASRSFVAECE 580
EF ++G+G+FG V Y + + E+IVA K + E
Sbjct: 11 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA--------KDEVAHTLTENR 62
Query: 581 ALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQ 640
L+N RH L + F+ D FV EY G L + H S ++V S +
Sbjct: 63 VLQNSRHPFLTAL-----KYSFQTHDRLCFVMEYANGGEL--FFHLSRERV----FSEDR 111
Query: 641 RVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTA 700
++ SA++YLH + +V+ DLK N++LD D + DFGL K
Sbjct: 112 ARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--------EG 161
Query: 701 VKTPSSSIGLKGTVGYVAPE------YGMGSEASMTG----DIFTGRRPIDAVFNEGHS 749
+K ++ GT Y+APE YG + G ++ GR P +N+ H
Sbjct: 162 IKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF---YNQDHE 217
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 102/250 (40%), Gaps = 27/250 (10%)
Query: 510 DTSPMEKQFPMVSYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
D +EK +VS + K F IGQG+ G VY VA++ +NL+ +
Sbjct: 2 DEEILEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQ 58
Query: 570 GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDD 629
+ E +R ++ N++ + + D V EY+ GSL D +
Sbjct: 59 PKKELIINEILVMRENKNPNIVNYLD-----SYLVGDELWVVMEYLAGGSLTDVV----- 108
Query: 630 QVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689
E C + Q + + A+E+LH + ++H D+K N+LL D + DFG
Sbjct: 109 -TETC-MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC 163
Query: 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT-GRRPIDAVFNEGH 748
++ Q S + GT ++APE DI++ G I+ + E
Sbjct: 164 AQITPEQ--------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
Query: 749 SLHEFAKTAL 758
L+E AL
Sbjct: 216 YLNENPLRAL 225
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 20/177 (11%)
Query: 525 ELSKATGEFSSSNMIGQGSFGYVYKGTL-----GEDEMIVAVKVINLKYKGASR-SFVAE 578
E A + + S +GQGSFG VY+G E E VA+K +N R F+ E
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 68
Query: 579 CEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQ-----SDDQVEV 633
++ ++++++ + S +G + E M G LK +L +++ V +
Sbjct: 69 ASVMKEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLRSLRPAMANNPV-L 122
Query: 634 CKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690
SL + + +A ++A M YL+ + VH DL N ++ D + DFG+ +
Sbjct: 123 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 176
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 98/239 (41%), Gaps = 53/239 (22%)
Query: 532 EFSSSNMIGQGSFGYV-----------YKGTLGEDEMIVAVKVINLKYKGASRSFVAECE 580
EF ++G+G+FG V Y + + E+IVA K + E
Sbjct: 152 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA--------KDEVAHTLTENR 203
Query: 581 ALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQ 640
L+N RH L + F+ D FV EY G L + H S ++V S +
Sbjct: 204 VLQNSRHPFLTAL-----KYSFQTHDRLCFVMEYANGGEL--FFHLSRERV----FSEDR 252
Query: 641 RVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTA 700
++ SA++YLH + +V+ DLK N++LD D + DFGL K
Sbjct: 253 ARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--------EG 302
Query: 701 VKTPSSSIGLKGTVGYVAPE------YGMGSEASMTG----DIFTGRRPIDAVFNEGHS 749
+K ++ GT Y+APE YG + G ++ GR P +N+ H
Sbjct: 303 IKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF---YNQDHE 358
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 29/204 (14%)
Query: 537 NMIGQGSFGYV---YKGTLGEDE-MIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
+ +G+G+FG V LG++ +VAVK + R F E + L+ + ++K
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAM 652
+ G V EY+ +G L+D+L + +++ +L L + + M
Sbjct: 89 YRGVSYGP---GRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLY-----SSQICKGM 140
Query: 653 EYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
EYL C VH DL N+L++ + + DFGLAK L + V+ P S
Sbjct: 141 EYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS---- 192
Query: 712 GTVGYVAPEYGMGSEASMTGDIFT 735
+ + APE S++ +IF+
Sbjct: 193 -PIFWYAPE-------SLSDNIFS 208
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 93/218 (42%), Gaps = 38/218 (17%)
Query: 522 SYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFV-AECE 580
Y EL K + IG G F V +VA+K+++ G+ + E E
Sbjct: 4 DYDELLKY---YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIE 60
Query: 581 ALRNIRHRNLIKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLI 639
AL+N+RH+++ ++ + + + K F V EY G L D++ D +LS
Sbjct: 61 ALKNLRHQHICQLYHVLETAN------KIFMVLEYCPGGELFDYIISQD------RLSEE 108
Query: 640 QRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA---KFLSDHQ 696
+ + + SA+ Y+H H DLKP N+L D + DFGL K D+
Sbjct: 109 ETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYH 165
Query: 697 LDTAVKTPSSSIGLKGTVGYVAPEY-----GMGSEASM 729
L T G++ Y APE +GSEA +
Sbjct: 166 LQTCC----------GSLAYAAPELIQGKSYLGSEADV 193
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 118/277 (42%), Gaps = 37/277 (13%)
Query: 532 EFSSSNMIGQGSFGYVYKG-TLGEDEMI---VAVKVIN-LKYKGASRSFVAECEALRNIR 586
EF ++G G+FG VYKG + E E + VA+K + A++ + E + ++
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
+ ++ +++ IC ++ + + + M G L D++ + D + L +N +
Sbjct: 83 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 131
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV---KT 703
+A M YL +VH DL NVL+ + DFG AK L + + K
Sbjct: 132 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 188
Query: 704 PSSSIGLKGTVGYVAPE------YGMGSEASMTGDIFTGRRPIDAV-FNEGHSLHEFAKT 756
P + L+ + + YG+ MT G +P D + +E S+ E +
Sbjct: 189 PIKWMALESILHRIYTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGER 244
Query: 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECL 793
LP+ + +D + +M MI D R K E +
Sbjct: 245 -LPQPPICTIDVYM---IMVKCWMIDADSRPKFRELI 277
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 98/239 (41%), Gaps = 53/239 (22%)
Query: 532 EFSSSNMIGQGSFGYV-----------YKGTLGEDEMIVAVKVINLKYKGASRSFVAECE 580
EF ++G+G+FG V Y + + E+IVA K + E
Sbjct: 149 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA--------KDEVAHTLTENR 200
Query: 581 ALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQ 640
L+N RH L + F+ D FV EY G L + H S ++V S +
Sbjct: 201 VLQNSRHPFLTAL-----KYSFQTHDRLCFVMEYANGGEL--FFHLSRERV----FSEDR 249
Query: 641 RVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTA 700
++ SA++YLH + +V+ DLK N++LD D + DFGL K
Sbjct: 250 ARFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--------EG 299
Query: 701 VKTPSSSIGLKGTVGYVAPE------YGMGSEASMTG----DIFTGRRPIDAVFNEGHS 749
+K ++ GT Y+APE YG + G ++ GR P +N+ H
Sbjct: 300 IKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF---YNQDHE 355
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 102/250 (40%), Gaps = 27/250 (10%)
Query: 510 DTSPMEKQFPMVSYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
D +EK +VS + K F IGQG+ G VY VA++ +NL+ +
Sbjct: 3 DEEILEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQ 59
Query: 570 GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDD 629
+ E +R ++ N++ + + D V EY+ GSL D +
Sbjct: 60 PKKELIINEILVMRENKNPNIVNYLD-----SYLVGDELWVVMEYLAGGSLTDVV----- 109
Query: 630 QVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689
E C + Q + + A+E+LH + ++H D+K N+LL D + DFG
Sbjct: 110 -TETC-MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC 164
Query: 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT-GRRPIDAVFNEGH 748
++ Q S + GT ++APE DI++ G I+ + E
Sbjct: 165 AQITPEQ--------SKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
Query: 749 SLHEFAKTAL 758
L+E AL
Sbjct: 217 YLNENPLRAL 226
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 102/250 (40%), Gaps = 27/250 (10%)
Query: 510 DTSPMEKQFPMVSYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
D +EK +VS + K F IGQG+ G VY VA++ +NL+ +
Sbjct: 2 DEEILEKLRSIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQ 58
Query: 570 GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDD 629
+ E +R ++ N++ + + D V EY+ GSL D +
Sbjct: 59 PKKELIINEILVMRENKNPNIVNYLD-----SYLVGDELWVVMEYLAGGSLTDVV----- 108
Query: 630 QVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689
E C + Q + + A+E+LH + ++H D+K N+LL D + DFG
Sbjct: 109 -TETC-MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC 163
Query: 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT-GRRPIDAVFNEGH 748
++ Q S + GT ++APE DI++ G I+ + E
Sbjct: 164 AQITPEQ--------SKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
Query: 749 SLHEFAKTAL 758
L+E AL
Sbjct: 216 YLNENPLRAL 225
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 25/186 (13%)
Query: 539 IGQGSFGYVYKGTLGEDE---MIVAVKVI-NLKYKGASRSFVAECEALRNIRHRNLIKII 594
IG+G FG V++G E M VA+K N F+ E +R H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
+ + + E G L+ +L QV L L + A +++A+ Y
Sbjct: 78 GVITENPV------WIIMELCTLGELRSFL-----QVRKFSLDLASLILYAYQLSTALAY 126
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L VH D+ NVL+ + + DFGL++++ D A K K +
Sbjct: 127 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKG-------KLPI 176
Query: 715 GYVAPE 720
++APE
Sbjct: 177 KWMAPE 182
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 30/225 (13%)
Query: 539 IGQGSFGYVYKGTL-----GEDEMIVAVKVINLKYKGASRS-FVAECEALRNIRHRNLIK 592
+G+ FG VYKG L GE VA+K + K +G R F E ++H N++
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWL----------HQSDDQVEVCKLSLIQRV 642
++ + + + +F Y +G L ++L DD+ L V
Sbjct: 77 LLGVVTKDQPL-----SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 131
Query: 643 NIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVK 702
++ +A+ MEYL H +VH DL NVL+ + + D GL F + D
Sbjct: 132 HLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGL--FREVYAADYYKL 186
Query: 703 TPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEG 747
+S + ++ ++APE M + S+ DI++ + VF+ G
Sbjct: 187 LGNSLLPIR----WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYG 227
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 29/196 (14%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVAECEALRNI 585
A +F +G+G FG VY + I+A+KV+ L+ G E E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIA 645
RH N++++ F + + EY G++ L + + K +
Sbjct: 66 RHPNILRLYGY-----FHDSTRVYLILEYAPLGTVYRELQK------LSKFDEQRTATYI 114
Query: 646 IDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPS 705
++A+A+ Y H ++H D+KP N+LL + DFG +V PS
Sbjct: 115 TELANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGW-----------SVHAPS 160
Query: 706 S-SIGLKGTVGYVAPE 720
S L GT+ Y+ PE
Sbjct: 161 SRRAALCGTLDYLPPE 176
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 118/277 (42%), Gaps = 37/277 (13%)
Query: 532 EFSSSNMIGQGSFGYVYKG-TLGEDEMI---VAVKVIN-LKYKGASRSFVAECEALRNIR 586
EF ++G G+FG VYKG + E E + VA+K + A++ + E + ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
+ ++ +++ IC ++ + + + M G L D++ + D + L +N +
Sbjct: 76 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 124
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV---KT 703
+A M YL +VH DL NVL+ + DFG AK L + + K
Sbjct: 125 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 181
Query: 704 PSSSIGLKGTVGYVAPE------YGMGSEASMTGDIFTGRRPIDAV-FNEGHSLHEFAKT 756
P + L+ + + YG+ MT G +P D + +E S+ E +
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGER 237
Query: 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECL 793
LP+ + +D + +M MI D R K E +
Sbjct: 238 -LPQPPICTIDVYM---IMVKCWMIDADSRPKFRELI 270
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 91/218 (41%), Gaps = 32/218 (14%)
Query: 524 AELSKAT---GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVA 577
AE+ K +F +G+G FG VY +++ I+A+KV+ L+ +G
Sbjct: 4 AEMPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR 63
Query: 578 ECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLS 637
E E ++RH N++++ F + E+ G L L + E +
Sbjct: 64 EIEIQSHLRHPNILRMYNY-----FHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSAT 118
Query: 638 LIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQL 697
++ ++A A+ Y H + ++H D+KP N+L+ + + DFG
Sbjct: 119 FME------ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGW--------- 160
Query: 698 DTAVKTPS-SSIGLKGTVGYVAPEYGMGSEASMTGDIF 734
+V PS + GT+ Y+ PE G D++
Sbjct: 161 --SVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLW 196
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVAECEALRNI 585
A +F +G+G FG VY + + I+A+KV+ L+ G E E ++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLI--QRVN 643
RH N++++ F + EY G++ E+ KLS QR
Sbjct: 68 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYR---------ELQKLSKFDEQRTA 113
Query: 644 IAI-DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVK 702
I ++A+A+ Y H ++H D+KP N+LL + +FG +V
Sbjct: 114 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGW-----------SVH 159
Query: 703 TPSS-SIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
PSS L GT+ Y+ PE G D+++
Sbjct: 160 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWS 193
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 35/196 (17%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVAECEALRNIRHR 588
+F +G+G FG VY + + I+A+KV+ L+ G E E ++RH
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLI--QRVNIAI 646
N++++ F + EY G++ E+ KLS QR I
Sbjct: 73 NILRLYGY-----FHDATRVYLILEYAPLGTVYR---------ELQKLSRFDEQRTATYI 118
Query: 647 -DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPS 705
++A+A+ Y H ++H D+KP N+LL + + DFG +V PS
Sbjct: 119 TELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGW-----------SVHAPS 164
Query: 706 S-SIGLKGTVGYVAPE 720
S L GT+ Y+ PE
Sbjct: 165 SRRTTLCGTLDYLPPE 180
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 87/202 (43%), Gaps = 35/202 (17%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMI---VAVKVIN---LKYKGASRSFVAECEALRNIR 586
+ ++G+GSFG V L +D++ AVKVI+ +K K S + E + L+ +
Sbjct: 28 YKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
H N+ K+ F+ + V E G L D + + + S + I
Sbjct: 85 HPNIXKLYEF-----FEDKGYFYLVGEVYTGGELFDEI------ISRKRFSEVDAARIIR 133
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVCDFGLAKFLSDHQLDTAVKT 703
V S + Y H + +VH DLKP N+LL+ D + DFGL+ A K
Sbjct: 134 QVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE------ASKK 184
Query: 704 PSSSIGLKGTVGYVAPEYGMGS 725
I GT Y+APE G+
Sbjct: 185 XKDKI---GTAYYIAPEVLHGT 203
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 117/277 (42%), Gaps = 37/277 (13%)
Query: 532 EFSSSNMIGQGSFGYVYKGTL---GEDEMI-VAVKVIN-LKYKGASRSFVAECEALRNIR 586
EF ++ G+FG VYKG GE I VA+K + A++ + E + ++
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
+ ++ +++ IC ++ + + + M G L D++ + D + L +N +
Sbjct: 83 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 131
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV---KT 703
+A M YL +VH DL NVL+ + DFGLAK L + + K
Sbjct: 132 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 704 PSSSIGLKGTVGYVAPE------YGMGSEASMTGDIFTGRRPIDAV-FNEGHSLHEFAKT 756
P + L+ + + YG+ MT G +P D + +E S+ E +
Sbjct: 189 PIKWMALESILHRIYTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGER 244
Query: 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECL 793
LP+ + +D + +M MI D R K E +
Sbjct: 245 -LPQPPICTIDVYM---IMVKCWMIDADSRPKFRELI 277
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 29/196 (14%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVAECEALRNI 585
A +F +G+G FG VY + + I+A+KV+ L+ G E E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIA 645
RH N++++ F + EY G++ L + + K +
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQK------LSKFDEQRTATYI 114
Query: 646 IDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPS 705
++A+A+ Y H ++H D+KP N+LL + DFG +V PS
Sbjct: 115 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVHAPS 160
Query: 706 S-SIGLKGTVGYVAPE 720
S L GT+ Y+ PE
Sbjct: 161 SRRAALCGTLDYLPPE 176
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 118/277 (42%), Gaps = 37/277 (13%)
Query: 532 EFSSSNMIGQGSFGYVYKG-TLGEDEMI---VAVKVIN-LKYKGASRSFVAECEALRNIR 586
EF ++G G+FG VYKG + E E + VA+K + A++ + E + ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
+ ++ +++ IC ++ + + + M G L D++ + D + L +N +
Sbjct: 78 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 126
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV---KT 703
+A M YL +VH DL NVL+ + DFG AK L + + K
Sbjct: 127 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183
Query: 704 PSSSIGLKGTVGYVAPE------YGMGSEASMTGDIFTGRRPIDAV-FNEGHSLHEFAKT 756
P + L+ + + YG+ MT G +P D + +E S+ E +
Sbjct: 184 PIKWMALESILHRIYTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGER 239
Query: 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECL 793
LP+ + +D + +M MI D R K E +
Sbjct: 240 -LPQPPICTID---VYMIMRKCWMIDADSRPKFRELI 272
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 27/234 (11%)
Query: 531 GEFSSSNMIGQGSFGYVY--KGTLGEDEMIVAVKVINLKYKGAS--RSFVAECEALRNIR 586
G + IG+G+F V + L E VAVK+I+ +S + E ++ +
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKE--VAVKIIDKTQLNSSSLQKLFREVRIMKVLN 71
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
H N++K+ + + + T + V EY G + D+L E + +++
Sbjct: 72 HPNIVKLFEVIET---EKTLY--LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI---- 122
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA-KFLSDHQLDTAVKTPS 705
SA++Y H Q +VH DLK N+LLD DM + DFG + +F ++LDT +P
Sbjct: 123 --VSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPP 177
Query: 706 -SSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTAL 758
++ L Y PE + S + + +G P D G +L E + L
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-----GQNLKELRERVL 226
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 35/259 (13%)
Query: 539 IGQGSFGYVYKGTL-GEDEMIVAVKVINLKYKGASRSFVAECEALRNI--RHRNLIKIIT 595
+G+G +G V++G GE VAVK+ + + +S+ E E + RH N++ I
Sbjct: 16 VGKGRYGEVWRGLWHGES---VAVKIFSSR---DEQSWFRETEIYNTVLLRHDNILGFIA 69
Query: 596 ICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYL 655
++ T + Y E+GSL D+L + + + + +A+ A + +L
Sbjct: 70 SDMTSRNSSTQL-WLITHYHEHGSLYDFLQRQTLEPHLA-------LRLAVSAACGLAHL 121
Query: 656 H-----HHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSD--HQLDTAVKTPSSSI 708
H +P + H D K NVL+ ++ + D GLA S LD P
Sbjct: 122 HVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIG-NNPRV-- 178
Query: 709 GLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDP 768
GT Y+APE + + D F + D ++ G L E A+ + ++E P
Sbjct: 179 ---GTKRYMAPEV---LDEQIRTDCFESYKWTD-IWAFGLVLWEIARRTIVNGIVEDYRP 231
Query: 769 SLLMEVMTNNSMIQEDKRV 787
+V+ N+ ++ K+V
Sbjct: 232 P-FYDVVPNDPSFEDMKKV 249
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 25/186 (13%)
Query: 539 IGQGSFGYVYKGTLGEDE---MIVAVKVI-NLKYKGASRSFVAECEALRNIRHRNLIKII 594
IG+G FG V++G E M VA+K N F+ E +R H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
+ + + E G L+ +L QV L L + A +++A+ Y
Sbjct: 78 GVITENPV------WIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 126
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L VH D+ NVL+ + + DFGL++++ D A K K +
Sbjct: 127 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-------KLPI 176
Query: 715 GYVAPE 720
++APE
Sbjct: 177 KWMAPE 182
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 118/277 (42%), Gaps = 37/277 (13%)
Query: 532 EFSSSNMIGQGSFGYVYKG-TLGEDEMI---VAVKVIN-LKYKGASRSFVAECEALRNIR 586
EF ++ G+FG VYKG + E E + VA+K + A++ + E + ++
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
+ ++ +++ IC ++ + + + M G L D++ + D + L +N +
Sbjct: 76 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCV 124
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV---KT 703
+A M YL +VH DL NVL+ + DFGLAK L + + K
Sbjct: 125 QIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 704 PSSSIGLKGTVGYVAPE------YGMGSEASMTGDIFTGRRPIDAV-FNEGHSLHEFAKT 756
P + L+ + + YG+ MT G +P D + +E S+ E +
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMT----FGSKPYDGIPASEISSILEKGER 237
Query: 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECL 793
LP+ + +D + +M MI D R K E +
Sbjct: 238 -LPQPPICTIDVYM---IMVKCWMIDADSRPKFRELI 270
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 29/185 (15%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
IG+GS G V T+ +VAVK ++L+ + E +R+ +H N++++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY---- 94
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQS---DDQVEVCKLSLIQRVNIAIDVASAMEYL 655
+ D V E++E G+L D + + ++Q+ L+++Q A+ L
Sbjct: 95 -NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQ----------ALSVL 143
Query: 656 HHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVG 715
H ++H D+K ++LL HD + DFG +S K L GT
Sbjct: 144 HAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVS--------KEVPRRKXLVGTPY 192
Query: 716 YVAPE 720
++APE
Sbjct: 193 WMAPE 197
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 126/282 (44%), Gaps = 44/282 (15%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLK--YKGASRSFVAECEALRNIRHRNLIKIITI 596
IGQG+FG V+K + VA+K + ++ +G + + E + L+ ++H N++ +I I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 597 CSSTDFKGTDFKA---FVFEYMEN---GSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVAS 650
C + KA VF++ E+ G L + L + LS I+RV + +
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK-------FTLSEIKRVMQML--LN 136
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
+ Y+H + ++H D+K +NVL+ D V + DFGLA+ S P+
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFS----LAKNSQPNRYXNR 189
Query: 711 KGTVGYVAPEYGMGSE-----------ASMTGDIFTGRRPIDAVFNEGHSL---HEFAKT 756
T+ Y PE +G + +++T R PI E H L + +
Sbjct: 190 VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQLCGS 248
Query: 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIR 798
PE V VD L E + +++ KR K ++ L A +R
Sbjct: 249 ITPE-VWPNVDNYELYEKL---ELVKGQKR-KVKDRLKAYVR 285
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 29/185 (15%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
IG+GS G V T+ +VAVK ++L+ + E +R+ +H N++++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY---- 92
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQS---DDQVEVCKLSLIQRVNIAIDVASAMEYL 655
+ D V E++E G+L D + + ++Q+ L+++Q A+ L
Sbjct: 93 -NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQ----------ALSVL 141
Query: 656 HHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVG 715
H ++H D+K ++LL HD + DFG +S K L GT
Sbjct: 142 HAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVS--------KEVPRRKXLVGTPY 190
Query: 716 YVAPE 720
++APE
Sbjct: 191 WMAPE 195
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 97/231 (41%), Gaps = 46/231 (19%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+G G+FG VYK E ++ A KVI+ K + ++ E + L + H N++K++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA-- 102
Query: 599 STDFKGTDFKAFVFEYMENGS-------LKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
F + + E+ G+ L+ L +S QV VCK +L A
Sbjct: 103 ---FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-VCKQTL-----------DA 147
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
+ YLH + ++H DLK N+L D + DFG++ +T
Sbjct: 148 LNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSA--------KNTRTIQRRDSFI 196
Query: 712 GTVGYVAPEYGMGSEASMTGDIFTGRRPIDA---VFNEGHSLHEFAKTALP 759
GT ++APE M + RP D V++ G +L E A+ P
Sbjct: 197 GTPYWMAPEVVMCETSK--------DRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 27/234 (11%)
Query: 531 GEFSSSNMIGQGSFGYVY--KGTLGEDEMIVAVKVINLKYKGAS--RSFVAECEALRNIR 586
G + IG+G+F V + L E VAVK+I+ +S + E ++ +
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKE--VAVKIIDKTQLNSSSLQKLFREVRIMKVLN 71
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
H N++K+ + + + T + V EY G + D+L E + +++
Sbjct: 72 HPNIVKLFEVIET---EKTLY--LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI---- 122
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA-KFLSDHQLDTAVKTPS 705
SA++Y H Q +VH DLK N+LLD DM + DFG + +F ++LDT +P
Sbjct: 123 --VSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPP 177
Query: 706 -SSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTAL 758
++ L Y PE + S + + +G P D G +L E + L
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-----GQNLKELRERVL 226
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 29/185 (15%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
IG+GS G V T+ +VAVK ++L+ + E +R+ +H N++++
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY---- 214
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQS---DDQVEVCKLSLIQRVNIAIDVASAMEYL 655
+ D V E++E G+L D + + ++Q+ L+++Q A+ L
Sbjct: 215 -NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQ----------ALSVL 263
Query: 656 HHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVG 715
H ++H D+K ++LL HD + DFG +S K L GT
Sbjct: 264 HAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVS--------KEVPRRKXLVGTPY 312
Query: 716 YVAPE 720
++APE
Sbjct: 313 WMAPE 317
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 105/240 (43%), Gaps = 39/240 (16%)
Query: 531 GEFSSSNMIGQGSFGYVY--KGTLGEDEMIVAVKVINLKYKGAS--RSFVAECEALRNIR 586
G + IG+G+F V + L E VAVK+I+ +S + E ++ +
Sbjct: 7 GNYRLLKTIGKGNFAKVKLARHILTGKE--VAVKIIDKTQLNSSSLQKLFREVRIMKVLN 64
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKD------WLHQSDDQVEVCKLSLIQ 640
H N++K+ + + + T + V EY G + D W+ + + + + +
Sbjct: 65 HPNIVKLFEVIET---EKTLY--LVMEYASGGEVFDYLVAHGWMKEKEARAKFRQ----- 114
Query: 641 RVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA-KFLSDHQLDT 699
+ SA++Y H Q +VH DLK N+LLD DM + DFG + +F ++LDT
Sbjct: 115 -------IVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT 164
Query: 700 AVKTPS-SSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTAL 758
+P ++ L Y PE + S + + +G P D G +L E + L
Sbjct: 165 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-----GQNLKELRERVL 219
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 29/185 (15%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
IG+GS G V T+ +VAVK ++L+ + E +R+ +H N++++
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY---- 137
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQS---DDQVEVCKLSLIQRVNIAIDVASAMEYL 655
+ D V E++E G+L D + + ++Q+ L+++Q A+ L
Sbjct: 138 -NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQ----------ALSVL 186
Query: 656 HHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVG 715
H ++H D+K ++LL HD + DFG +S K L GT
Sbjct: 187 HAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVS--------KEVPRRKXLVGTPY 235
Query: 716 YVAPE 720
++APE
Sbjct: 236 WMAPE 240
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 51/195 (26%), Positives = 84/195 (43%), Gaps = 33/195 (16%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVAECEALRNIRHR 588
+F +G+G FG VY + + I+A+KV+ L+ G E E ++RH
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLI--QRVNIAI 646
N++++ F + EY G++ E+ KLS QR I
Sbjct: 73 NILRLYGY-----FHDATRVYLILEYAPLGTVYR---------ELQKLSRFDEQRTATYI 118
Query: 647 -DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPS 705
++A+A+ Y H ++H D+KP N+LL + + DFG + + DT
Sbjct: 119 TELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT------ 169
Query: 706 SSIGLKGTVGYVAPE 720
L GT+ Y+ PE
Sbjct: 170 ----LCGTLDYLPPE 180
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 29/185 (15%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
IG+GS G V T+ +VAVK ++L+ + E +R+ +H N++++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY---- 83
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQS---DDQVEVCKLSLIQRVNIAIDVASAMEYL 655
+ D V E++E G+L D + + ++Q+ L+++Q A+ L
Sbjct: 84 -NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQ----------ALSVL 132
Query: 656 HHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVG 715
H ++H D+K ++LL HD + DFG +S K L GT
Sbjct: 133 HAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVS--------KEVPRRKXLVGTPY 181
Query: 716 YVAPE 720
++APE
Sbjct: 182 WMAPE 186
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 89/213 (41%), Gaps = 35/213 (16%)
Query: 528 KATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRH 587
+ +F ++GQG+FG V K D A+K I + S + ++E L ++ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS-TILSEVXLLASLNH 61
Query: 588 -------------RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVC 634
RN +K T K T F EY EN +L D +H + +
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKK---KSTLF--IQXEYCENRTLYDLIHSENLNQQRD 116
Query: 635 KLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK---- 690
+ + R + A+ Y+H ++H +LKP N+ +D + DFGLAK
Sbjct: 117 EYWRLFR-----QILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHR 168
Query: 691 FLSDHQLDTAVKTPSSSIGLK---GTVGYVAPE 720
L +LD+ P SS L GT YVA E
Sbjct: 169 SLDILKLDSQ-NLPGSSDNLTSAIGTAXYVATE 200
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 133/307 (43%), Gaps = 45/307 (14%)
Query: 514 MEKQFPMVSYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK--YKGA 571
M KQ+ V ++ IGQG+FG V+K + VA+K + ++ +G
Sbjct: 1 MAKQYDSVE-CPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGF 59
Query: 572 SRSFVAECEALRNIRHRNLIKIITICSST-----DFKGTDFKAFVF-EYMENGSLKDWLH 625
+ + E + L+ ++H N++ +I IC + KG+ + F F E+ G L + L
Sbjct: 60 PITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV 119
Query: 626 QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685
+ LS I+RV + + + Y+H + ++H D+K +NVL+ D V + D
Sbjct: 120 K-------FTLSEIKRVMQML--LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLAD 167
Query: 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSE-----------ASMTGDIF 734
FGLA+ S P+ T+ Y PE +G + +++
Sbjct: 168 FGLARAFS----LAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW 223
Query: 735 TGRRPIDAVFNEGHSL---HEFAKTALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEE 791
T R PI E H L + + PE V VD L E + +++ KR K ++
Sbjct: 224 T-RSPIMQGNTEQHQLALISQLCGSITPE-VWPNVDNYELYEKL---ELVKGQKR-KVKD 277
Query: 792 CLNAIIR 798
L A +R
Sbjct: 278 RLKAYVR 284
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 29/196 (14%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVAECEALRNI 585
A +F +G+G FG VY + + I+A+KV+ L+ G E E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIA 645
RH N++++ F + EY G++ L + + K +
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQK------LSKFDEQRTATYI 114
Query: 646 IDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPS 705
++A+A+ Y H ++H D+KP N+LL + DFG +V PS
Sbjct: 115 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVHAPS 160
Query: 706 S-SIGLKGTVGYVAPE 720
S L GT+ Y+ PE
Sbjct: 161 SRRTDLCGTLDYLPPE 176
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 21/188 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNLIK---- 592
IG GS+G K D I+ K ++ + + V+E LR ++H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAM 652
II ++T + V EY E G L + + + + + RV + +A
Sbjct: 74 IIDRTNTTLY-------IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 653 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKG 712
+ ++H DLKP+NV LD + DFGLA+ L +H D A + G
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDEDFAKE-------FVG 178
Query: 713 TVGYVAPE 720
T Y++PE
Sbjct: 179 TPYYMSPE 186
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 29/185 (15%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
IG+GS G V T+ +VAVK ++L+ + E +R+ +H N++++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY---- 87
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQS---DDQVEVCKLSLIQRVNIAIDVASAMEYL 655
+ D V E++E G+L D + + ++Q+ L+++Q A+ L
Sbjct: 88 -NSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQ----------ALSVL 136
Query: 656 HHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVG 715
H ++H D+K ++LL HD + DFG +S K L GT
Sbjct: 137 HAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVS--------KEVPRRKXLVGTPY 185
Query: 716 YVAPE 720
++APE
Sbjct: 186 WMAPE 190
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 100/232 (43%), Gaps = 23/232 (9%)
Query: 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGAS--RSFVAECEALRNIRHR 588
G + IG+G+F V VAVK+I+ + + E ++ + H
Sbjct: 15 GNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N++K+ + + + T + V EY G + D+L E + +++
Sbjct: 75 NIVKLFEVIET---EKTLY--LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI------ 123
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA-KFLSDHQLDTAVKTPS-S 706
SA++Y H Q +VH DLK N+LLD DM + DFG + +F ++LDT +P +
Sbjct: 124 VSAVQYCH---QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYA 180
Query: 707 SIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTAL 758
+ L Y PE + S + + +G P D G +L E + L
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-----GQNLKELRERVL 227
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 124/282 (43%), Gaps = 44/282 (15%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLK--YKGASRSFVAECEALRNIRHRNLIKIITI 596
IGQG+FG V+K + VA+K + ++ +G + + E + L+ ++H N++ +I I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 597 CSST-----DFKGTDFKAFVF-EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVAS 650
C + KG+ + F F E+ G L + L K +L + + + +
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL---------VKFTLSEIKRVMQMLLN 136
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
+ Y+H + ++H D+K +NVL+ D V + DFGLA+ S P+
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFS----LAKNSQPNRYXNR 189
Query: 711 KGTVGYVAPEYGMGSE-----------ASMTGDIFTGRRPIDAVFNEGHSL---HEFAKT 756
T+ Y PE +G + +++T R PI E H L + +
Sbjct: 190 VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQLCGS 248
Query: 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIR 798
PE V VD L E + +++ KR K ++ L A +R
Sbjct: 249 ITPE-VWPNVDNYELYEKL---ELVKGQKR-KVKDRLKAYVR 285
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 29/196 (14%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVAECEALRNI 585
A +F +G+G FG VY + + I+A+KV+ L+ G E E ++
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIA 645
RH N++++ F + EY G++ L + + K +
Sbjct: 70 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQK------LSKFDEQRTATYI 118
Query: 646 IDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPS 705
++A+A+ Y H ++H D+KP N+LL + DFG +V PS
Sbjct: 119 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVHAPS 164
Query: 706 S-SIGLKGTVGYVAPE 720
S L GT+ Y+ PE
Sbjct: 165 SRRTTLCGTLDYLPPE 180
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 29/196 (14%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVAECEALRNI 585
A +F +G+G FG VY + + I+A+KV+ L+ G E E ++
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIA 645
RH N++++ F + EY G++ L + + K +
Sbjct: 65 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQK------LSKFDEQRTATYI 113
Query: 646 IDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPS 705
++A+A+ Y H ++H D+KP N+LL + DFG +V PS
Sbjct: 114 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVHAPS 159
Query: 706 S-SIGLKGTVGYVAPE 720
S L GT+ Y+ PE
Sbjct: 160 SRRTTLCGTLDYLPPE 175
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 29/196 (14%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVAECEALRNI 585
A +F +G+G FG VY + + I+A+KV+ L+ G E E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIA 645
RH N++++ F + EY G++ L + + K +
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQK------LSKFDEQRTATYI 117
Query: 646 IDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPS 705
++A+A+ Y H ++H D+KP N+LL + DFG +V PS
Sbjct: 118 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVHAPS 163
Query: 706 S-SIGLKGTVGYVAPE 720
S L GT+ Y+ PE
Sbjct: 164 SRRTTLCGTLDYLPPE 179
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 29/196 (14%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVAECEALRNI 585
A +F +G+G FG VY + + I+A+KV+ L+ G E E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIA 645
RH N++++ F + EY G++ L + + K +
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQK------LSKFDEQRTATYI 114
Query: 646 IDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPS 705
++A+A+ Y H ++H D+KP N+LL + DFG +V PS
Sbjct: 115 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVHAPS 160
Query: 706 S-SIGLKGTVGYVAPE 720
S L GT+ Y+ PE
Sbjct: 161 SRRTXLCGTLDYLPPE 176
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 93/202 (46%), Gaps = 39/202 (19%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK---GASR------SFVAECEAL 582
E+ S +G G+ G V + VA+++I+ K K G++R + E E L
Sbjct: 150 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIIS-KRKFAIGSAREADPALNVETEIEIL 208
Query: 583 RNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEV-CKLSLIQR 641
+ + H +IKI + D+ V E ME G L D + + E CKL Q
Sbjct: 209 KKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ- 261
Query: 642 VNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVCDFGLAKFLSDHQLD 698
+ A++YLH + ++H DLKP NVLL + D + + DFG +K L + L
Sbjct: 262 ------MLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL- 311
Query: 699 TAVKTPSSSIGLKGTVGYVAPE 720
++T L GT Y+APE
Sbjct: 312 --MRT------LCGTPTYLAPE 325
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 53.1 bits (126), Expect = 6e-07, Method: Composition-based stats.
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 545 GYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKG 604
G ++KG ++++V V + SR F EC LR H N++ ++ C S
Sbjct: 24 GELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPP--- 80
Query: 605 TDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMV 664
+ +M GSL + LH+ + V + Q V A+D+A M +L H +P +
Sbjct: 81 APHPTLITHWMPYGSLYNVLHEGTNFV----VDQSQAVKFALDMARGMAFL-HTLEPLIP 135
Query: 665 HGDLKPSNVLLDHDMVAHV 683
L +V++D DM A +
Sbjct: 136 RHALNSRSVMIDEDMTARI 154
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 29/196 (14%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVAECEALRNI 585
A +F +G+G FG VY + + I+A+KV+ L+ G E E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIA 645
RH N++++ F + EY G++ L + + K +
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQK------LSKFDEQRTATYI 114
Query: 646 IDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPS 705
++A+A+ Y H ++H D+KP N+LL + DFG +V PS
Sbjct: 115 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVHAPS 160
Query: 706 S-SIGLKGTVGYVAPE 720
S L GT+ Y+ PE
Sbjct: 161 SRRXXLCGTLDYLPPE 176
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 29/196 (14%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVAECEALRNI 585
A +F +G+G FG VY + + I+A+KV+ L+ G E E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIA 645
RH N++++ F + EY G++ L + + K +
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQK------LSKFDEQRTATYI 117
Query: 646 IDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPS 705
++A+A+ Y H ++H D+KP N+LL + DFG +V PS
Sbjct: 118 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVHAPS 163
Query: 706 S-SIGLKGTVGYVAPE 720
S L GT+ Y+ PE
Sbjct: 164 SRRXXLCGTLDYLPPE 179
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 88/194 (45%), Gaps = 35/194 (18%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSF---VAECEALRNIRHRN 589
FS IG GSFG VY + +VA+K ++ K ++ + + E L+ +RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 590 LIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
I+ ++G ++ E+ ++ L + D +EV K L Q V IA
Sbjct: 116 TIQ---------YRG----CYLREHTAWLVMEYCLGSASDLLEVHKKPL-QEVEIAAVTH 161
Query: 650 SAME---YLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSS 706
A++ YLH H M+H D+K N+LL + + DFG A ++ P++
Sbjct: 162 GALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMA----------PAN 208
Query: 707 SIGLKGTVGYVAPE 720
GT ++APE
Sbjct: 209 X--FVGTPYWMAPE 220
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 25/186 (13%)
Query: 539 IGQGSFGYVYKGTLGEDE---MIVAVKVI-NLKYKGASRSFVAECEALRNIRHRNLIKII 594
IG+G FG V++G E M VA+K N F+ E +R H +++K+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
+ + + E G L+ +L QV L L + A +++A+ Y
Sbjct: 458 GVITENPV------WIIMELCTLGELRSFL-----QVRKFSLDLASLILYAYQLSTALAY 506
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L VH D+ NVL+ + + DFGL++++ D A K K +
Sbjct: 507 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-------KLPI 556
Query: 715 GYVAPE 720
++APE
Sbjct: 557 KWMAPE 562
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 21/188 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNLIK---- 592
IG GS+G K D I+ K ++ + + V+E LR ++H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAM 652
II ++T + V EY E G L + + + + + RV + +A
Sbjct: 74 IIDRTNTTLY-------IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 653 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKG 712
+ ++H DLKP+NV LD + DFGLA+ L+ DT S + G
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH---DT-----SFAKAFVG 178
Query: 713 TVGYVAPE 720
T Y++PE
Sbjct: 179 TPYYMSPE 186
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 21/206 (10%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVK---VINLKYKGASRSFVAECEALRNIRHRN 589
F IG+G F VY+ D + VA+K + +L A + E + L+ + H N
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 590 LIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+IK F + V E + G L + Q + + + + +
Sbjct: 94 VIKYYA-----SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKY--FVQLC 146
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
SA+E++H ++H D+KP+NV + V + D GL +F S KT +++
Sbjct: 147 SALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS-------KT-TAAHS 195
Query: 710 LKGTVGYVAPEYGMGSEASMTGDIFT 735
L GT Y++PE + + DI++
Sbjct: 196 LVGTPYYMSPERIHENGYNFKSDIWS 221
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 104/234 (44%), Gaps = 27/234 (11%)
Query: 531 GEFSSSNMIGQGSFGYVY--KGTLGEDEMIVAVKVINLKYKGAS--RSFVAECEALRNIR 586
G + IG+G+F V + L E VAV++I+ +S + E ++ +
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKE--VAVRIIDKTQLNSSSLQKLFREVRIMKVLN 71
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
H N++K+ + + + T + V EY G + D+L E + +++
Sbjct: 72 HPNIVKLFEVIET---EKTLY--LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI---- 122
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA-KFLSDHQLDTAVKTPS 705
SA++Y H Q +VH DLK N+LLD DM + DFG + +F ++LDT +P
Sbjct: 123 --VSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPP 177
Query: 706 -SSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTAL 758
++ L Y PE + S + + +G P D G +L E + L
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-----GQNLKELRERVL 226
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 93/202 (46%), Gaps = 39/202 (19%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK---GASR------SFVAECEAL 582
E+ S +G G+ G V + VA+++I+ K K G++R + E E L
Sbjct: 136 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIIS-KRKFAIGSAREADPALNVETEIEIL 194
Query: 583 RNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEV-CKLSLIQR 641
+ + H +IKI + D+ V E ME G L D + + E CKL Q
Sbjct: 195 KKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ- 247
Query: 642 VNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVCDFGLAKFLSDHQLD 698
+ A++YLH + ++H DLKP NVLL + D + + DFG +K L + L
Sbjct: 248 ------MLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL- 297
Query: 699 TAVKTPSSSIGLKGTVGYVAPE 720
++T L GT Y+APE
Sbjct: 298 --MRT------LCGTPTYLAPE 311
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 52.8 bits (125), Expect = 8e-07, Method: Composition-based stats.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 29/196 (14%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVAECEALRNI 585
A +F +G+G FG VY + + I+A+KV+ L+ G E E ++
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIA 645
RH N++++ F + EY G++ L + + K +
Sbjct: 63 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQK------LSKFDEQRTATYI 111
Query: 646 IDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPS 705
++A+A+ Y H ++H D+KP N+LL + DFG +V PS
Sbjct: 112 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVHAPS 157
Query: 706 S-SIGLKGTVGYVAPE 720
S L GT+ Y+ PE
Sbjct: 158 SRRTTLCGTLDYLPPE 173
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 25/186 (13%)
Query: 539 IGQGSFGYVYKGTLGEDE---MIVAVKVI-NLKYKGASRSFVAECEALRNIRHRNLIKII 594
IG+G FG V++G E + VA+K N F+ E +R H +++K+I
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
+ + + E G L+ +L QV L L + A +++A+ Y
Sbjct: 106 GVITENPV------WIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 154
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L VH D+ NVL+ + + DFGL++++ D A K K +
Sbjct: 155 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-------KLPI 204
Query: 715 GYVAPE 720
++APE
Sbjct: 205 KWMAPE 210
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 29/196 (14%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVAECEALRNI 585
A +F +G+G FG VY + + I+A+KV+ L+ G E E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIA 645
RH N++++ F + EY G++ L + + K +
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQK------LSKFDEQRTATYI 117
Query: 646 IDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPS 705
++A+A+ Y H ++H D+KP N+LL + DFG +V PS
Sbjct: 118 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW-----------SVHAPS 163
Query: 706 SSI-GLKGTVGYVAPE 720
S L GT+ Y+ PE
Sbjct: 164 SRRDDLCGTLDYLPPE 179
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 126/282 (44%), Gaps = 44/282 (15%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLK--YKGASRSFVAECEALRNIRHRNLIKIITI 596
IGQG+FG V+K + VA+K + ++ +G + + E + L+ ++H N++ +I I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 597 CSST-----DFKGTDFKAFVF-EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVAS 650
C + KG+ + F F E+ G L + L + LS I+RV + +
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-------FTLSEIKRVMQML--LN 136
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
+ Y+H + ++H D+K +NVL+ D V + DFGLA+ S P+
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFS----LAKNSQPNRYXNR 189
Query: 711 KGTVGYVAPEYGMGSE-----------ASMTGDIFTGRRPIDAVFNEGHSL---HEFAKT 756
T+ Y PE +G + +++T R PI E H L + +
Sbjct: 190 VVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQLCGS 248
Query: 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIR 798
PE V VD L E + +++ KR K ++ L A +R
Sbjct: 249 ITPE-VWPNVDNYELYEKL---ELVKGQKR-KVKDRLKAYVR 285
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 78/186 (41%), Gaps = 25/186 (13%)
Query: 539 IGQGSFGYVYKGTLGEDE---MIVAVKVI-NLKYKGASRSFVAECEALRNIRHRNLIKII 594
IG+G FG V++G E M VA+K N F+ E +R H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
+ + + E G L+ +L QV L L + A +++A+ Y
Sbjct: 78 GVITENPV------WIIMELCTLGELRSFL-----QVRKFSLDLASLILYAYQLSTALAY 126
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L VH D+ NVL+ + DFGL++++ D A K K +
Sbjct: 127 LESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKG-------KLPI 176
Query: 715 GYVAPE 720
++APE
Sbjct: 177 KWMAPE 182
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 101/233 (43%), Gaps = 46/233 (19%)
Query: 538 MIGQ-GSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITI 596
+IG+ G FG VYK E ++ A KVI+ K + ++ E + L + H N++K++
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 597 CSSTDFKGTDFKAFVFEYMENGS-------LKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
F + + E+ G+ L+ L +S QV VCK +L
Sbjct: 76 -----FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-VCKQTL----------- 118
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
A+ YLH + ++H DLK N+L D + DFG +S T ++ S I
Sbjct: 119 DALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFG----VSAKNTRTXIQRRDSFI- 170
Query: 710 LKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDA---VFNEGHSLHEFAKTALP 759
GT ++APE M + RP D V++ G +L E A+ P
Sbjct: 171 --GTPYWMAPEVVMCETSK--------DRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 25/186 (13%)
Query: 539 IGQGSFGYVYKGTLGEDE---MIVAVKVI-NLKYKGASRSFVAECEALRNIRHRNLIKII 594
IG+G FG V++G E + VA+K N F+ E +R H +++K+I
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
+ + + E G L+ +L QV L L + A +++A+ Y
Sbjct: 83 GVITENPV------WIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 131
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L VH D+ NVL+ + + DFGL++++ D A K K +
Sbjct: 132 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-------KLPI 181
Query: 715 GYVAPE 720
++APE
Sbjct: 182 KWMAPE 187
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 18/205 (8%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNLI 591
++ IG+G++G V + VA+K I+ +++ + + E + L RH N+I
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
I I ++ + V + ME K Q +C L Q +
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYF-LYQ-------ILRG 156
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
++Y+H ++H DLKPSN+L++ +CDFGLA+ T T +
Sbjct: 157 LKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVA---- 209
Query: 712 GTVGYVAPEYGMGSEA-SMTGDIFT 735
T Y APE + S+ + + DI++
Sbjct: 210 -TRWYRAPEIMLNSKGYTKSIDIWS 233
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 106/245 (43%), Gaps = 27/245 (11%)
Query: 536 SNMIGQGSFGYVYKGTLGEDEMIVAVKVI-NLKYKGASRSFVAECEALRNIRHRNLIKII 594
S+++GQG+ V++G + + A+KV N+ + + E E L+ + H+N++K+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
I T T K + E+ GSL L + + + + + + DV M +
Sbjct: 74 AIEEETT---TRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI---VLRDVVGGMNH 127
Query: 655 LHHHCQPPMVHGDLKPSNVLL----DHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
L + +VH ++KP N++ D V + DFG A+ L D + + L
Sbjct: 128 LRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE---------QFVXL 175
Query: 711 KGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSL 770
GT Y+ P+ M A + D +++ G + + A +LP + E P
Sbjct: 176 YGTEEYLHPD--MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE--GPRR 231
Query: 771 LMEVM 775
EVM
Sbjct: 232 NKEVM 236
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 106/245 (43%), Gaps = 27/245 (11%)
Query: 536 SNMIGQGSFGYVYKGTLGEDEMIVAVKVI-NLKYKGASRSFVAECEALRNIRHRNLIKII 594
S+++GQG+ V++G + + A+KV N+ + + E E L+ + H+N++K+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
I T T K + E+ GSL L + + + + + + DV M +
Sbjct: 74 AIEEETT---TRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI---VLRDVVGGMNH 127
Query: 655 LHHHCQPPMVHGDLKPSNVLL----DHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
L + +VH ++KP N++ D V + DFG A+ L D + + L
Sbjct: 128 LRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE---------QFVSL 175
Query: 711 KGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSL 770
GT Y+ P+ M A + D +++ G + + A +LP + E P
Sbjct: 176 YGTEEYLHPD--MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE--GPRR 231
Query: 771 LMEVM 775
EVM
Sbjct: 232 NKEVM 236
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 28/147 (19%)
Query: 578 ECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLS 637
E L+++ H N+IK+ + F+ + V E+ E G L + + + K
Sbjct: 96 EISLLKSLDHPNIIKLFDV-----FEDKKYFYLVTEFYEGGELFEQI------INRHKFD 144
Query: 638 LIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHD---MVAHVCDFGLAKFLS- 693
NI + S + YLH H +VH D+KP N+LL++ + + DFGL+ F S
Sbjct: 145 ECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK 201
Query: 694 DHQLDTAVKTPSSSIGLKGTVGYVAPE 720
D++L + GT Y+APE
Sbjct: 202 DYKLRDRL----------GTAYYIAPE 218
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
+ S +E+LH Q +++ DLKP NVLLD D + D GLA L Q T
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK------- 347
Query: 708 IGLKGTVGYVAPEYGMGSEASMTGDIFT 735
G GT G++APE +G E + D F
Sbjct: 348 -GYAGTPGFMAPELLLGEEYDFSVDYFA 374
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 25/186 (13%)
Query: 539 IGQGSFGYVYKGTLGEDE---MIVAVKVI-NLKYKGASRSFVAECEALRNIRHRNLIKII 594
IG+G FG V++G E + VA+K N F+ E +R H +++K+I
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
+ + + E G L+ +L QV L L + A +++A+ Y
Sbjct: 81 GVITENPV------WIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 129
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L VH D+ NVL+ + + DFGL++++ D A K K +
Sbjct: 130 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-------KLPI 179
Query: 715 GYVAPE 720
++APE
Sbjct: 180 KWMAPE 185
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 25/186 (13%)
Query: 539 IGQGSFGYVYKGTLGEDE---MIVAVKVI-NLKYKGASRSFVAECEALRNIRHRNLIKII 594
IG+G FG V++G E + VA+K N F+ E +R H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
+ + + E G L+ +L QV L L + A +++A+ Y
Sbjct: 78 GVITENPV------WIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 126
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L VH D+ NVL+ + + DFGL++++ D A K K +
Sbjct: 127 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-------KLPI 176
Query: 715 GYVAPE 720
++APE
Sbjct: 177 KWMAPE 182
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 86/198 (43%), Gaps = 43/198 (21%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSF---VAECEALRNIRHRN 589
FS IG GSFG VY + +VA+K ++ K ++ + + E L+ +RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 590 LIKIITICSSTDFKGTDFKA----FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIA 645
I+ ++G + V EY L + D +EV K L Q V IA
Sbjct: 77 TIQ---------YRGCYLREHTAWLVMEYC--------LGSASDLLEVHKKPL-QEVEIA 118
Query: 646 IDVASAME---YLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVK 702
A++ YLH H M+H D+K N+LL + + DFG A ++
Sbjct: 119 AVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMA--------- 166
Query: 703 TPSSSIGLKGTVGYVAPE 720
P++ GT ++APE
Sbjct: 167 -PANX--FVGTPYWMAPE 181
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
+ S +E+LH Q +++ DLKP NVLLD D + D GLA L Q T
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK------- 347
Query: 708 IGLKGTVGYVAPEYGMGSEASMTGDIFT 735
G GT G++APE +G E + D F
Sbjct: 348 -GYAGTPGFMAPELLLGEEYDFSVDYFA 374
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 95/239 (39%), Gaps = 54/239 (22%)
Query: 532 EFSSSNMIGQGSFGYV-----------YKGTLGEDEMIVAVKVINLKYKGASRSFVAECE 580
+F ++G+G+FG V Y + E+I+A K V E
Sbjct: 9 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA--------KDEVAHTVTESR 60
Query: 581 ALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQ 640
L+N RH L + F+ D FV EY G L + H S ++V + +
Sbjct: 61 VLQNTRHPFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF- 112
Query: 641 RVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTA 700
++ SA+EYLH +V+ D+K N++LD D + DFGL K
Sbjct: 113 ---YGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--------EG 158
Query: 701 VKTPSSSIGLKGTVGYVAPE------YGMGSEASMTG----DIFTGRRPIDAVFNEGHS 749
+ ++ GT Y+APE YG + G ++ GR P +N+ H
Sbjct: 159 ISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF---YNQDHE 214
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 18/206 (8%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNL 590
+++ + IG+G++G V +++ VA+K I+ +++ + + E + L RH N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENI 87
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVAS 650
I I I + + V + ME K Q +C L Q +
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF-LYQ-------ILR 139
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
++Y+H ++H DLKPSN+LL+ +CDFGLA+ T T +
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA--- 193
Query: 711 KGTVGYVAPEYGMGSEA-SMTGDIFT 735
T Y APE + S+ + + DI++
Sbjct: 194 --TRWYRAPEIMLNSKGYTKSIDIWS 217
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 21/188 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNLIK---- 592
IG GS+G K D I+ K ++ + + V+E LR ++H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAM 652
II ++T + V EY E G L + + + + + RV + +A
Sbjct: 74 IIDRTNTTLY-------IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 653 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKG 712
+ ++H DLKP+NV LD + DFGLA+ L+ DT S + G
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH---DT-----SFAKTFVG 178
Query: 713 TVGYVAPE 720
T Y++PE
Sbjct: 179 TPYYMSPE 186
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
+ S +E+LH Q +++ DLKP NVLLD D + D GLA L Q T
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK------- 347
Query: 708 IGLKGTVGYVAPEYGMGSEASMTGDIFT 735
G GT G++APE +G E + D F
Sbjct: 348 -GYAGTPGFMAPELLLGEEYDFSVDYFA 374
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 95/239 (39%), Gaps = 54/239 (22%)
Query: 532 EFSSSNMIGQGSFGYV-----------YKGTLGEDEMIVAVKVINLKYKGASRSFVAECE 580
+F ++G+G+FG V Y + E+I+A K V E
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA--------KDEVAHTVTESR 57
Query: 581 ALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQ 640
L+N RH L + F+ D FV EY G L + H S ++V + +
Sbjct: 58 VLQNTRHPFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF- 109
Query: 641 RVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTA 700
++ SA+EYLH +V+ D+K N++LD D + DFGL K
Sbjct: 110 ---YGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--------EG 155
Query: 701 VKTPSSSIGLKGTVGYVAPE------YGMGSEASMTG----DIFTGRRPIDAVFNEGHS 749
+ ++ GT Y+APE YG + G ++ GR P +N+ H
Sbjct: 156 ISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF---YNQDHE 211
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 95/239 (39%), Gaps = 54/239 (22%)
Query: 532 EFSSSNMIGQGSFGYV-----------YKGTLGEDEMIVAVKVINLKYKGASRSFVAECE 580
+F ++G+G+FG V Y + E+I+A K V E
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA--------KDEVAHTVTESR 57
Query: 581 ALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQ 640
L+N RH L + F+ D FV EY G L + H S ++V + +
Sbjct: 58 VLQNTRHPFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF- 109
Query: 641 RVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTA 700
++ SA+EYLH +V+ D+K N++LD D + DFGL K
Sbjct: 110 ---YGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--------EG 155
Query: 701 VKTPSSSIGLKGTVGYVAPE------YGMGSEASMTG----DIFTGRRPIDAVFNEGHS 749
+ ++ GT Y+APE YG + G ++ GR P +N+ H
Sbjct: 156 ISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF---YNQDHE 211
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
+ S +E+LH Q +++ DLKP NVLLD D + D GLA L Q T
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK------- 347
Query: 708 IGLKGTVGYVAPEYGMGSEASMTGDIFT 735
G GT G++APE +G E + D F
Sbjct: 348 -GYAGTPGFMAPELLLGEEYDFSVDYFA 374
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 18/206 (8%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNL 590
+++ + IG+G++G V +++ VA+K I+ +++ + + E + L RH N+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVAS 650
I I I + + V + ME K Q +C L Q +
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF-LYQ-------ILR 135
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
++Y+H ++H DLKPSN+LL+ +CDFGLA+ T T +
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA--- 189
Query: 711 KGTVGYVAPEYGMGSEA-SMTGDIFT 735
T Y APE + S+ + + DI++
Sbjct: 190 --TRWYRAPEIMLNSKGYTKSIDIWS 213
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 83/207 (40%), Gaps = 29/207 (14%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVAECEALRNIRHR 588
+F +G+G FG VY + IVA+KV+ ++ +G E E ++ H
Sbjct: 24 DFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHP 83
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N++++ F + EY G L L +S C + I ++
Sbjct: 84 NILRLYNY-----FYDRRRIYLILEYAPRGELYKELQKS------CTFDEQRTATIMEEL 132
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPS-SS 707
A A+ Y H ++H D+KP N+LL + DFG +V PS
Sbjct: 133 ADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGW-----------SVHAPSLRR 178
Query: 708 IGLKGTVGYVAPEYGMGSEASMTGDIF 734
+ GT+ Y+ PE G + D++
Sbjct: 179 KTMCGTLDYLPPEMIEGRMHNEKVDLW 205
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNL 590
+++ + IG+G++G V +++ VA+K I+ +++ + + E + L RH N+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGSLK--DWLHQSDDQVEVCKLSLIQRVNIAIDV 648
I I I + + V + ME K H S+D + C L Q +
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYF-LYQ-------I 133
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
++Y+H ++H DLKPSN+LL+ +CDFGLA+ T T +
Sbjct: 134 LRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA- 189
Query: 709 GLKGTVGYVAPEYGMGSEA-SMTGDIFT 735
T Y APE + S+ + + DI++
Sbjct: 190 ----TRWYRAPEIMLNSKGYTKSIDIWS 213
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 95/239 (39%), Gaps = 54/239 (22%)
Query: 532 EFSSSNMIGQGSFGYV-----------YKGTLGEDEMIVAVKVINLKYKGASRSFVAECE 580
+F ++G+G+FG V Y + E+I+A K V E
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA--------KDEVAHTVTESR 57
Query: 581 ALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQ 640
L+N RH L + F+ D FV EY G L + H S ++V + +
Sbjct: 58 VLQNTRHPFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF- 109
Query: 641 RVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTA 700
++ SA+EYLH +V+ D+K N++LD D + DFGL K
Sbjct: 110 ---YGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--------EG 155
Query: 701 VKTPSSSIGLKGTVGYVAPE------YGMGSEASMTG----DIFTGRRPIDAVFNEGHS 749
+ ++ GT Y+APE YG + G ++ GR P +N+ H
Sbjct: 156 ISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF---YNQDHE 211
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 18/206 (8%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNL 590
+++ + IG+G++G V +++ VA+K I+ +++ + + E + L RH N+
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 91
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVAS 650
I I I + + V + ME K Q +C L Q +
Sbjct: 92 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF-LYQ-------ILR 143
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
++Y+H ++H DLKPSN+LL+ +CDFGLA+ T T +
Sbjct: 144 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA--- 197
Query: 711 KGTVGYVAPEYGMGSEA-SMTGDIFT 735
T Y APE + S+ + + DI++
Sbjct: 198 --TRWYRAPEIMLNSKGYTKSIDIWS 221
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 18/206 (8%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNL 590
+++ + IG+G++G V +++ VA+K I+ +++ + + E + L RH N+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVAS 650
I I I + + V + ME K Q +C L Q +
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF-LYQ-------ILR 135
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
++Y+H ++H DLKPSN+LL+ +CDFGLA+ T T +
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA--- 189
Query: 711 KGTVGYVAPEYGMGSEA-SMTGDIFT 735
T Y APE + S+ + + DI++
Sbjct: 190 --TRWYRAPEIMLNSKGYTKSIDIWS 213
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 25/186 (13%)
Query: 539 IGQGSFGYVYKGTLGEDE---MIVAVKVI-NLKYKGASRSFVAECEALRNIRHRNLIKII 594
IG+G FG V++G E + VA+K N F+ E +R H +++K+I
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
+ + + E G L+ +L QV L L + A +++A+ Y
Sbjct: 80 GVITENPV------WIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 128
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L VH D+ NVL+ + + DFGL++++ D A K K +
Sbjct: 129 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-------KLPI 178
Query: 715 GYVAPE 720
++APE
Sbjct: 179 KWMAPE 184
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 95/239 (39%), Gaps = 54/239 (22%)
Query: 532 EFSSSNMIGQGSFGYV-----------YKGTLGEDEMIVAVKVINLKYKGASRSFVAECE 580
+F ++G+G+FG V Y + E+I+A K V E
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA--------KDEVAHTVTESR 57
Query: 581 ALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQ 640
L+N RH L + F+ D FV EY G L + H S ++V + +
Sbjct: 58 VLQNTRHPFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF- 109
Query: 641 RVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTA 700
++ SA+EYLH +V+ D+K N++LD D + DFGL K
Sbjct: 110 ---YGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--------EG 155
Query: 701 VKTPSSSIGLKGTVGYVAPE------YGMGSEASMTG----DIFTGRRPIDAVFNEGHS 749
+ ++ GT Y+APE YG + G ++ GR P +N+ H
Sbjct: 156 ISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF---YNQDHE 211
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 18/206 (8%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNL 590
+++ + IG+G++G V +++ VA+K I+ +++ + + E + L RH N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVAS 650
I I I + + V + ME K Q +C L Q +
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF-LYQ-------ILR 139
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
++Y+H ++H DLKPSN+LL+ +CDFGLA+ T T +
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA--- 193
Query: 711 KGTVGYVAPEYGMGSEA-SMTGDIFT 735
T Y APE + S+ + + DI++
Sbjct: 194 --TRWYRAPEIMLNSKGYTKSIDIWS 217
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 18/206 (8%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNL 590
+++ + IG+G++G V +++ VA+K I+ +++ + + E + L RH N+
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 85
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVAS 650
I I I + + V + ME K Q +C L Q +
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF-LYQ-------ILR 137
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
++Y+H ++H DLKPSN+LL+ +CDFGLA+ T T +
Sbjct: 138 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA--- 191
Query: 711 KGTVGYVAPEYGMGSEA-SMTGDIFT 735
T Y APE + S+ + + DI++
Sbjct: 192 --TRWYRAPEIMLNSKGYTKSIDIWS 215
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 100/218 (45%), Gaps = 37/218 (16%)
Query: 539 IGQGSFGYVYKG-TLGEDE----MIVAVKVINLKYKGASRSF---VAECEALRNI-RHRN 589
+G+G+FG V +G D+ V V V LK + V+E E ++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 590 LIKIITICSSTDFKGTDFKAFVF-EYMENGSLKDWLHQSD----------DQVEVCKLSL 638
+I ++ C+ D +V EY G+L+++L ++V +++
Sbjct: 103 IINLLGACTQ------DGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTF 156
Query: 639 IQRVNIAIDVASAMEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQL 697
V+ +A MEYL C +H DL NVL+ + V + DFGLA+ +++ +
Sbjct: 157 KDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINN--I 210
Query: 698 DTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
D KT + + +K ++APE + D+++
Sbjct: 211 DXXKKTTNGRLPVK----WMAPEALFDRVYTHQSDVWS 244
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 78/186 (41%), Gaps = 25/186 (13%)
Query: 539 IGQGSFGYVYKGTLGEDE---MIVAVKVI-NLKYKGASRSFVAECEALRNIRHRNLIKII 594
IG+G FG V++G E M VA+K N F+ E +R H +++K+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
+ + + E G L+ +L QV L L + A +++A+ Y
Sbjct: 458 GVITENPV------WIIMELCTLGELRSFL-----QVRKFSLDLASLILYAYQLSTALAY 506
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L VH D+ NVL+ + DFGL++++ D A K K +
Sbjct: 507 LESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKG-------KLPI 556
Query: 715 GYVAPE 720
++APE
Sbjct: 557 KWMAPE 562
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 18/206 (8%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNL 590
+++ + IG+G++G V +++ VA+K I+ +++ + + E + L RH N+
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVAS 650
I I I + + V + ME K Q +C L Q +
Sbjct: 104 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF-LYQ-------ILR 155
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
++Y+H ++H DLKPSN+LL+ +CDFGLA+ T T +
Sbjct: 156 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA--- 209
Query: 711 KGTVGYVAPEYGMGSEA-SMTGDIFT 735
T Y APE + S+ + + DI++
Sbjct: 210 --TRWYRAPEIMLNSKGYTKSIDIWS 233
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 77/177 (43%), Gaps = 34/177 (19%)
Query: 539 IGQGSFGYVYKGTLG-----EDEMIVAVKVINLKYKGASRS-FVAECEALRNIRHRNLIK 592
IG+G+FG V++ E +VAVK++ + ++ F E + + N++K
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVC------------------ 634
++ +C+ G +FEYM G L ++L VC
Sbjct: 115 LLGVCAV----GKPM-CLLFEYMAYGDLNEFLRSMSPHT-VCSLSHSDLSTRARVSSPGP 168
Query: 635 -KLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690
LS +++ IA VA+ M YL VH DL N L+ +MV + DFGL++
Sbjct: 169 PPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSR 222
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNL 590
+++ + IG+G++G V +++ VA+K I+ +++ + + E + L RH N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGSLK--DWLHQSDDQVEVCKLSLIQRVNIAIDV 648
I I I + + V + ME K H S+D + C L Q +
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHI--CYF-LYQ-------I 137
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
++Y+H ++H DLKPSN+LL+ +CDFGLA+ T T +
Sbjct: 138 LRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA- 193
Query: 709 GLKGTVGYVAPEYGMGSEA-SMTGDIFT 735
T Y APE + S+ + + DI++
Sbjct: 194 ----TRWYRAPEIMLNSKGYTKSIDIWS 217
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 18/206 (8%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNL 590
+++ + IG+G++G V +++ VA+K I+ +++ + + E + L RH N+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVAS 650
I I I + + V + ME K Q +C L Q +
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF-LYQ-------ILR 135
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
++Y+H ++H DLKPSN+LL+ +CDFGLA+ T T +
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA--- 189
Query: 711 KGTVGYVAPEYGMGSEA-SMTGDIFT 735
T Y APE + S+ + + DI++
Sbjct: 190 --TRWYRAPEIMLNSKGYTKSIDIWS 213
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 25/186 (13%)
Query: 539 IGQGSFGYVYKGTLGEDE---MIVAVKVI-NLKYKGASRSFVAECEALRNIRHRNLIKII 594
IG+G FG V++G E + VA+K N F+ E +R H +++K+I
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
+ + + E G L+ +L QV L L + A +++A+ Y
Sbjct: 75 GVITENPV------WIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 123
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L VH D+ NVL+ + + DFGL++++ D A K K +
Sbjct: 124 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-------KLPI 173
Query: 715 GYVAPE 720
++APE
Sbjct: 174 KWMAPE 179
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 90/206 (43%), Gaps = 19/206 (9%)
Query: 525 ELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRN 584
E+ +F +IG+G+FG V + E I A+K++N K++ R+ A R+
Sbjct: 68 EMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILN-KWEMLKRAETACFREERD 126
Query: 585 IRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQV-EVCKLSLIQRVN 643
+ + IT F+ + V +Y G L L + +D++ E I +
Sbjct: 127 VLVNGDCQWITALHYA-FQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMV 185
Query: 644 IAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKT 703
+AID + Y VH D+KP NVLLD + + DFG ++D T
Sbjct: 186 LAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDD------GT 230
Query: 704 PSSSIGLKGTVGYVAPEYGMGSEASM 729
SS+ + GT Y++PE E M
Sbjct: 231 VQSSVAV-GTPDYISPEILQAMEDGM 255
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 37/218 (16%)
Query: 539 IGQGSFGYVYKG-TLGEDE------MIVAVKVINLKYKGASRS-FVAECEALRNI-RHRN 589
+G+G+FG V +G D+ + VAVK++ S V+E E ++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 590 LIKIITICSSTDFKGTDFKAFVF-EYMENGSLKDWLHQSD----------DQVEVCKLSL 638
+I ++ C+ D +V EY G+L+++L ++V +++
Sbjct: 103 IINLLGACTQ------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 639 IQRVNIAIDVASAMEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQL 697
V+ +A MEYL C +H DL NVL+ + V + DFGLA+ +++ +
Sbjct: 157 KDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINN--I 210
Query: 698 DTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
D KT + + +K ++APE + D+++
Sbjct: 211 DXXKKTTNGRLPVK----WMAPEALFDRVYTHQSDVWS 244
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 20/161 (12%)
Query: 536 SNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG--ASRSFVAECEALRNIRHRNLIKI 593
++IG+GS+GYVY E VA+K +N ++ + + E L ++ +I++
Sbjct: 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRL 90
Query: 594 ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQ----SDDQVEVCKLSLIQRVNIAIDVA 649
+ D D V E + + LK +++ ++ +L+ N
Sbjct: 91 YDLIIPDDLLKFDELYIVLE-IADSDLKKLFKTPIFLTEEHIKTILYNLLLGEN------ 143
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690
++H + ++H DLKP+N LL+ D VCDFGLA+
Sbjct: 144 ----FIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLAR 177
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/212 (19%), Positives = 86/212 (40%), Gaps = 18/212 (8%)
Query: 527 SKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASR---SFVAECEALR 583
S + + ++G G V+ D VAVKV+ F E +
Sbjct: 8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAA 67
Query: 584 NIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVN 643
+ H ++ + + G V EY++ +L+D +H ++ + +
Sbjct: 68 ALNHPAIVAVYDTGEAETPAGP-LPYIVMEYVDGVTLRDIVHTE------GPMTPKRAIE 120
Query: 644 IAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKT 703
+ D A+ + H + ++H D+KP+N+L+ V DFG+A+ ++D + +
Sbjct: 121 VIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIAD-----SGNS 172
Query: 704 PSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
+ + GT Y++PE G D+++
Sbjct: 173 VXQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 111/255 (43%), Gaps = 42/255 (16%)
Query: 200 TVINFGIGRNQISGTIPPGIRNLVNLIGFGAEENQLHGTIPDAIGELKNLQKLCLFRNFL 259
T INF NQ++ P ++NL L+ NQ+ P + L NL L LF N +
Sbjct: 71 TQINFS--NNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQI 124
Query: 260 QGRIPSGLGNLTKLANLELSSNSLQG-NIPSSLGNCQNLMSFTASQNKLTGALPHQLLSI 318
P L NLT L LELSSN++ + S L + Q L SF N++T P L ++
Sbjct: 125 TDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQL-SF---GNQVTDLKP--LANL 176
Query: 319 TTXXXXXXXXXXXXXXXXXXQVGHLKNLVILDISSNQFSGVIP----------------- 361
TT ++ +L++L+ ++NQ S + P
Sbjct: 177 TTLERLDISSNKVSDISVLAKLTNLESLI---ATNNQISDITPLGILTNLDELSLNGNQL 233
Query: 362 ---GTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNVSSNNLSGQIPEFLKNLSVL 418
GTL++ L LD+++N + P LS L + EL + +N +S P L L+ L
Sbjct: 234 KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTAL 289
Query: 419 EFLSLSYNHFEGEVP 433
L L+ N E P
Sbjct: 290 TNLELNENQLEDISP 304
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 90/206 (43%), Gaps = 19/206 (9%)
Query: 525 ELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRN 584
E+ +F +IG+G+FG V + E I A+K++N K++ R+ A R+
Sbjct: 84 EMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILN-KWEMLKRAETACFREERD 142
Query: 585 IRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQV-EVCKLSLIQRVN 643
+ + IT F+ + V +Y G L L + +D++ E I +
Sbjct: 143 VLVNGDCQWITALHYA-FQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMV 201
Query: 644 IAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKT 703
+AID + Y VH D+KP NVLLD + + DFG ++D T
Sbjct: 202 LAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDD------GT 246
Query: 704 PSSSIGLKGTVGYVAPEYGMGSEASM 729
SS+ + GT Y++PE E M
Sbjct: 247 VQSSVAV-GTPDYISPEILQAMEDGM 271
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 18/206 (8%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNL 590
+++ + IG+G++G V +++ VA+K I+ +++ + + E + L RH N+
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVAS 650
I I I + + V + ME K Q +C L Q +
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF-LYQ-------ILR 133
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
++Y+H ++H DLKPSN+LL+ +CDFGLA+ T T +
Sbjct: 134 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA--- 187
Query: 711 KGTVGYVAPEYGMGSEA-SMTGDIFT 735
T Y APE + S+ + + DI++
Sbjct: 188 --TRWYRAPEIMLNSKGYTKSIDIWS 211
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 18/206 (8%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNL 590
+++ + IG+G++G V +++ VA+K I+ +++ + + E + L RH N+
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVAS 650
I I I + + V + ME K Q +C L Q +
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF-LYQ-------ILR 140
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
++Y+H ++H DLKPSN+LL+ +CDFGLA+ T T +
Sbjct: 141 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA--- 194
Query: 711 KGTVGYVAPEYGMGSEA-SMTGDIFT 735
T Y APE + S+ + + DI++
Sbjct: 195 --TRWYRAPEIMLNSKGYTKSIDIWS 218
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 18/206 (8%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNL 590
+++ + IG+G++G V +++ VA+K I+ +++ + + E + L RH N+
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 89
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVAS 650
I I I + + V + ME K Q +C L Q +
Sbjct: 90 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF-LYQ-------ILR 141
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
++Y+H ++H DLKPSN+LL+ +CDFGLA+ T T +
Sbjct: 142 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA--- 195
Query: 711 KGTVGYVAPEYGMGSEA-SMTGDIFT 735
T Y APE + S+ + + DI++
Sbjct: 196 --TRWYRAPEIMLNSKGYTKSIDIWS 219
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 18/206 (8%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNL 590
+++ + IG+G++G V +++ VA+K I+ +++ + + E + L RH N+
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 80
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVAS 650
I I I + + V + ME K Q +C L Q +
Sbjct: 81 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF-LYQ-------ILR 132
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
++Y+H ++H DLKPSN+LL+ +CDFGLA+ T T +
Sbjct: 133 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA--- 186
Query: 711 KGTVGYVAPEYGMGSEA-SMTGDIFT 735
T Y APE + S+ + + DI++
Sbjct: 187 --TRWYRAPEIMLNSKGYTKSIDIWS 210
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 95/239 (39%), Gaps = 54/239 (22%)
Query: 532 EFSSSNMIGQGSFGYV-----------YKGTLGEDEMIVAVKVINLKYKGASRSFVAECE 580
+F ++G+G+FG V Y + E+I+A K V E
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA--------KDEVAHTVTESR 57
Query: 581 ALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQ 640
L+N RH L + F+ D FV EY G L + H S ++V + +
Sbjct: 58 VLQNTRHPFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF- 109
Query: 641 RVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTA 700
++ SA+EYLH +V+ D+K N++LD D + DFGL K
Sbjct: 110 ---YGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--------EG 155
Query: 701 VKTPSSSIGLKGTVGYVAPE------YGMGSEASMTG----DIFTGRRPIDAVFNEGHS 749
+ ++ GT Y+APE YG + G ++ GR P +N+ H
Sbjct: 156 ISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF---YNQDHE 211
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 18/206 (8%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNL 590
+++ + IG+G++G V +++ VA+K I+ +++ + + E + L RH N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVAS 650
I I I + + V + ME K Q +C L Q +
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF-LYQ-------ILR 139
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
++Y+H ++H DLKPSN+LL+ +CDFGLA+ T T +
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA--- 193
Query: 711 KGTVGYVAPEYGMGSEA-SMTGDIFT 735
T Y APE + S+ + + DI++
Sbjct: 194 --TRWYRAPEIMLNSKGYTKSIDIWS 217
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 18/206 (8%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNL 590
+++ + IG+G++G V +++ VA+K I+ +++ + + E + L RH N+
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVAS 650
I I I + + V + ME K Q +C L Q +
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF-LYQ-------ILR 133
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
++Y+H ++H DLKPSN+LL+ +CDFGLA+ T T +
Sbjct: 134 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA--- 187
Query: 711 KGTVGYVAPEYGMGSEA-SMTGDIFT 735
T Y APE + S+ + + DI++
Sbjct: 188 --TRWYRAPEIMLNSKGYTKSIDIWS 211
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 111/255 (43%), Gaps = 42/255 (16%)
Query: 200 TVINFGIGRNQISGTIPPGIRNLVNLIGFGAEENQLHGTIPDAIGELKNLQKLCLFRNFL 259
T INF NQ++ P ++NL L+ NQ+ P + L NL L LF N +
Sbjct: 70 TQINFS--NNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQI 123
Query: 260 QGRIPSGLGNLTKLANLELSSNSLQG-NIPSSLGNCQNLMSFTASQNKLTGALPHQLLSI 318
P L NLT L LELSSN++ + S L + Q L SF N++T P L ++
Sbjct: 124 TDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQL-SF---GNQVTDLKP--LANL 175
Query: 319 TTXXXXXXXXXXXXXXXXXXQVGHLKNLVILDISSNQFSGVIP----------------- 361
TT ++ +L++L+ ++NQ S + P
Sbjct: 176 TTLERLDISSNKVSDISVLAKLTNLESLI---ATNNQISDITPLGILTNLDELSLNGNQL 232
Query: 362 ---GTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNVSSNNLSGQIPEFLKNLSVL 418
GTL++ L LD+++N + P LS L + EL + +N +S P L L+ L
Sbjct: 233 KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTAL 288
Query: 419 EFLSLSYNHFEGEVP 433
L L+ N E P
Sbjct: 289 TNLELNENQLEDISP 303
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 99/232 (42%), Gaps = 23/232 (9%)
Query: 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGAS--RSFVAECEALRNIRHR 588
G + IG+G+F V VA+K+I+ + + E ++ + H
Sbjct: 12 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 71
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N++K+ + + + T + + EY G + D+L E S +++
Sbjct: 72 NIVKLFEVIET---EKTLY--LIMEYASGGEVFDYLVAHGRMKEKEARSKFRQI------ 120
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA-KFLSDHQLDTAVKTPS-S 706
SA++Y H Q +VH DLK N+LLD DM + DFG + +F +LDT +P +
Sbjct: 121 VSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYA 177
Query: 707 SIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTAL 758
+ L Y PE + S + + +G P D G +L E + L
Sbjct: 178 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-----GQNLKELRERVL 224
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 102/250 (40%), Gaps = 27/250 (10%)
Query: 510 DTSPMEKQFPMVSYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
D +EK +VS + K F IGQG+ G VY VA++ +NL+ +
Sbjct: 3 DEEILEKLRIIVSVGDPKKKYTRFEK---IGQGASGTVYTAMDVATGQEVAIRQMNLQQQ 59
Query: 570 GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDD 629
+ E +R ++ N++ + + D V EY+ GSL D +
Sbjct: 60 PKKELIINEILVMRENKNPNIVNYLD-----SYLVGDELWVVMEYLAGGSLTDVV----- 109
Query: 630 QVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689
E C + Q + + A+E+LH + ++H ++K N+LL D + DFG
Sbjct: 110 -TETC-MDEGQIAAVCRECLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFC 164
Query: 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT-GRRPIDAVFNEGH 748
++ Q S + GT ++APE DI++ G I+ + E
Sbjct: 165 AQITPEQ--------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
Query: 749 SLHEFAKTAL 758
L+E AL
Sbjct: 217 YLNENPLRAL 226
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 46/231 (19%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+G G+FG VYK E ++ A KVI+ K + ++ E + L + H N++K++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA-- 102
Query: 599 STDFKGTDFKAFVFEYMENGS-------LKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
F + + E+ G+ L+ L +S QV VCK +L A
Sbjct: 103 ---FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-VCKQTL-----------DA 147
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
+ YLH + ++H DLK N+L D + DFG++ + ++ S I
Sbjct: 148 LNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSA-----KNTRXIQRRDSFI--- 196
Query: 712 GTVGYVAPEYGMGSEASMTGDIFTGRRPIDA---VFNEGHSLHEFAKTALP 759
GT ++APE M + RP D V++ G +L E A+ P
Sbjct: 197 GTPYWMAPEVVMCETSK--------DRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 20/163 (12%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVAECEALRNIRHRN 589
++ IG+G++G V+K E IVA+K + L +G S + E L+ ++H+N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 590 LIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH--QSDDQVEVCKLSLIQRVNIAID 647
++++ + S D K T VFE+ + LK + D E+ K L Q
Sbjct: 63 IVRLHDVLHS-DKKLT----LVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQ------- 109
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690
+ + + H ++H DLKP N+L++ + + DFGLA+
Sbjct: 110 LLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 95/239 (39%), Gaps = 54/239 (22%)
Query: 532 EFSSSNMIGQGSFGYV-----------YKGTLGEDEMIVAVKVINLKYKGASRSFVAECE 580
+F ++G+G+FG V Y + E+I+A K V E
Sbjct: 11 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA--------KDEVAHTVTESR 62
Query: 581 ALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQ 640
L+N RH L + F+ D FV EY G L + H S ++V + +
Sbjct: 63 VLQNTRHPFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF- 114
Query: 641 RVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTA 700
++ SA+EYLH +V+ D+K N++LD D + DFGL K
Sbjct: 115 ---YGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK--------EG 160
Query: 701 VKTPSSSIGLKGTVGYVAPE------YGMGSEASMTG----DIFTGRRPIDAVFNEGHS 749
+ ++ GT Y+APE YG + G ++ GR P +N+ H
Sbjct: 161 ISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF---YNQDHE 216
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 16/193 (8%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL-KYKGASRSFVAECEALRNIRHRNL 590
++ +IG G+ V + VA+K INL K + + + E +A+ H N+
Sbjct: 11 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 70
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI---D 647
+ T F D V + + GS+ D + + E K ++ IA +
Sbjct: 71 VSYYT-----SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGE-HKSGVLDESTIATILRE 124
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
V +EYLH + Q +H D+K N+LL D + DFG++ FL+ T K +
Sbjct: 125 VLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 181
Query: 708 IGLKGTVGYVAPE 720
+ GT ++APE
Sbjct: 182 V---GTPCWMAPE 191
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/196 (24%), Positives = 82/196 (41%), Gaps = 29/196 (14%)
Query: 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI---NLKYKGASRSFVAECEALRNI 585
A +F +G+G FG VY + + I+A+KV+ L+ G E E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIA 645
RH N++++ F + EY G++ L + + K +
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQK------LSKFDEQRTATYI 117
Query: 646 IDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPS 705
++A+A+ Y H ++H D+KP N+LL + +FG +V PS
Sbjct: 118 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGW-----------SVHAPS 163
Query: 706 S-SIGLKGTVGYVAPE 720
S L GT+ Y+ PE
Sbjct: 164 SRRTTLCGTLDYLPPE 179
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 102/234 (43%), Gaps = 27/234 (11%)
Query: 531 GEFSSSNMIGQGSFGYVY--KGTLGEDEMIVAVKVINLKYKGAS--RSFVAECEALRNIR 586
G + IG+G+F V + L E VAVK+I+ +S + E ++ +
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKE--VAVKIIDKTQLNSSSLQKLFREVRIMKVLN 71
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
H N++K+ + + + T + V EY G + D+L E + +++
Sbjct: 72 HPNIVKLFEVIET---EKTLY--LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI---- 122
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA-KFLSDHQLDTAVKTPS 705
SA++Y H Q +VH DLK N+LLD DM + DFG + +F ++LD P
Sbjct: 123 --VSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPP 177
Query: 706 -SSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTAL 758
++ L Y PE + S + + +G P D G +L E + L
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-----GQNLKELRERVL 226
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/212 (19%), Positives = 87/212 (41%), Gaps = 18/212 (8%)
Query: 527 SKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASR---SFVAECEALR 583
S + + ++G G V+ D VAVKV+ F E +
Sbjct: 8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAA 67
Query: 584 NIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVN 643
+ H ++ + + G V EY++ +L+D +H ++ + +
Sbjct: 68 ALNHPAIVAVYDTGEAETPAGP-LPYIVMEYVDGVTLRDIVHTE------GPMTPKRAIE 120
Query: 644 IAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKT 703
+ D A+ + H + ++H D+KP+N+++ V DFG+A+ ++D + +
Sbjct: 121 VIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD-----SGNS 172
Query: 704 PSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
+ + + GT Y++PE G D+++
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 90/205 (43%), Gaps = 37/205 (18%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVA------ECEALRNIRHRNLIK 592
+G G F V K + A K I + ASR V+ E LR + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAM 652
+ + + TD + E + G L D+L Q + E S I+++ +
Sbjct: 80 LHDVYENR----TDV-VLILELVSGGELFDFLAQKESLSEEEATSFIKQI------LDGV 128
Query: 653 EYLHHHCQPPMVHGDLKPSNV-LLDHDM-VAHV--CDFGLAKFLSDHQLDTAVKTPSSSI 708
YLH + H DLKP N+ LLD ++ + H+ DFGLA H+++ V+ +
Sbjct: 129 NYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-----HEIEDGVEFKN--- 177
Query: 709 GLKGTVGYVAPEY----GMGSEASM 729
+ GT +VAPE +G EA M
Sbjct: 178 -IFGTPEFVAPEIVNYEPLGLEADM 201
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 18/206 (8%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNL 590
+++ + IG+G++G V +++ VA+K I+ +++ + + E + L RH N+
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVAS 650
I I I + + V + ME K Q +C L Q +
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF-LYQ-------ILR 137
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
++Y+H ++H DLKPSN+LL+ +CDFGLA+ T T +
Sbjct: 138 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA--- 191
Query: 711 KGTVGYVAPEYGMGSEA-SMTGDIFT 735
T Y APE + S+ + + DI++
Sbjct: 192 --TRWYRAPEIMLNSKGYTKSIDIWS 215
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 108/254 (42%), Gaps = 40/254 (15%)
Query: 200 TVINFGIGRNQISGTIPPGIRNLVNLIGFGAEENQLHGTIPDAIGELKNLQKLCLFRNFL 259
T INF NQ++ P ++NL L+ NQ+ P + L NL L LF N +
Sbjct: 66 TQINFS--NNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQI 119
Query: 260 QGRIPSGLGNLTKLANLELSSNSLQGNIPSSLGNCQNLMSFTASQNKLTGALPHQLLSIT 319
P L NLT L LELSSN++ S+L +L N++T P L ++T
Sbjct: 120 TDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLNFG-NQVTDLKP--LANLT 172
Query: 320 TXXXXXXXXXXXXXXXXXXQVGHLKNLVILDISSNQFSGVIP------------------ 361
T ++ +L++L+ ++NQ S + P
Sbjct: 173 TLERLDISSNKVSDISVLAKLTNLESLI---ATNNQISDITPLGILTNLDELSLNGNQLK 229
Query: 362 --GTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNVSSNNLSGQIPEFLKNLSVLE 419
GTL++ L LD+++N + P LS L + EL + +N +S P L L+ L
Sbjct: 230 DIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALT 285
Query: 420 FLSLSYNHFEGEVP 433
L L+ N E P
Sbjct: 286 NLELNENQLEDISP 299
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 18/194 (9%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL-KYKGASRSFVAECEALRNIRHRNL 590
++ +IG G+ V + VA+K INL K + + + E +A+ H N+
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 75
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH----QSDDQVEVCKLSLIQRVNIAI 646
+ T F D V + + GS+ D + + + + V S I I
Sbjct: 76 VSYYT-----SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTI--ATILR 128
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSS 706
+V +EYLH + Q +H D+K N+LL D + DFG++ FL+ T K +
Sbjct: 129 EVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT 185
Query: 707 SIGLKGTVGYVAPE 720
+ GT ++APE
Sbjct: 186 FV---GTPCWMAPE 196
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 95/218 (43%), Gaps = 35/218 (16%)
Query: 513 PMEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY 568
PM ++ P EL+K E + + + +G G++G V + + VAVK ++ +
Sbjct: 2 PMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 61
Query: 569 KG---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH 625
+ A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 62 QSIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 120
Query: 626 ---QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH 682
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D
Sbjct: 121 CQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELK 167
Query: 683 VCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
+ DFGLA+ D G T Y APE
Sbjct: 168 ILDFGLARHTDDEM-----------TGYVATRWYRAPE 194
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 37/203 (18%)
Query: 539 IGQGSFGYVYKG-TLGEDE------MIVAVKVINLKYKGASRS-FVAECEALRNI-RHRN 589
+G+G+FG V +G D+ + VAVK++ S V+E E ++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 590 LIKIITICSSTDFKGTDFKAFVF-EYMENGSLKDWLHQSD----------DQVEVCKLSL 638
+I ++ C+ D +V EY G+L+++L ++V +++
Sbjct: 103 IINLLGACTQ------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 639 IQRVNIAIDVASAMEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQL 697
V+ +A MEYL C +H DL NVL+ + V + DFGLA+ +++ +
Sbjct: 157 KDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMRIADFGLARDINN--I 210
Query: 698 DTAVKTPSSSIGLKGTVGYVAPE 720
D KT + + +K ++APE
Sbjct: 211 DYYKKTTNGRLPVK----WMAPE 229
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/212 (19%), Positives = 87/212 (41%), Gaps = 18/212 (8%)
Query: 527 SKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASR---SFVAECEALR 583
S + + ++G G V+ D VAVKV+ F E +
Sbjct: 8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAA 67
Query: 584 NIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVN 643
+ H ++ + + G V EY++ +L+D +H ++ + +
Sbjct: 68 ALNHPAIVAVYDTGEAETPAGP-LPYIVMEYVDGVTLRDIVHTE------GPMTPKRAIE 120
Query: 644 IAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKT 703
+ D A+ + H + ++H D+KP+N+++ V DFG+A+ ++D + +
Sbjct: 121 VIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD-----SGNS 172
Query: 704 PSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
+ + + GT Y++PE G D+++
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 90/205 (43%), Gaps = 37/205 (18%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVA------ECEALRNIRHRNLIK 592
+G G F V K + A K I + ASR V+ E LR + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAM 652
+ + + TD + E + G L D+L Q + E S I+++ +
Sbjct: 80 LHDVYENR----TDV-VLILELVSGGELFDFLAQKESLSEEEATSFIKQI------LDGV 128
Query: 653 EYLHHHCQPPMVHGDLKPSNV-LLDHDM-VAHV--CDFGLAKFLSDHQLDTAVKTPSSSI 708
YLH + H DLKP N+ LLD ++ + H+ DFGLA H+++ V+ +
Sbjct: 129 NYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-----HEIEDGVEFKN--- 177
Query: 709 GLKGTVGYVAPEY----GMGSEASM 729
+ GT +VAPE +G EA M
Sbjct: 178 -IFGTPEFVAPEIVNYEPLGLEADM 201
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 18/202 (8%)
Query: 521 VSYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECE 580
+ + L G F ++G G++G VYKG + + A+KV+++ E
Sbjct: 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEIN 72
Query: 581 ALRNI-RHRNLIKIITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSL 638
L+ HRN+ + G D + + V E+ GS+ D + + + K
Sbjct: 73 MLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT--KGNTLKEEW 130
Query: 639 IQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLD 698
I I ++ + +LH H ++H D+K NVLL + + DFG++ QLD
Sbjct: 131 I--AYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSA-----QLD 180
Query: 699 TAVKTPSSSIGLKGTVGYVAPE 720
V ++ I GT ++APE
Sbjct: 181 RTVGRRNTFI---GTPYWMAPE 199
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 84/198 (42%), Gaps = 40/198 (20%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRN-- 589
+F +G GSFG V+ + A+KV LK + R L+ + H N
Sbjct: 7 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKV--LKKEIVVR--------LKQVEHTNDE 56
Query: 590 --LIKIIT----ICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDD-QVEVCKLSLIQRV 642
++ I+T I F+ + +Y+E G L L +S V K
Sbjct: 57 RLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF------ 110
Query: 643 NIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVK 702
A +V A+EYLH +++ DLKP N+LLD + + DFG AK++
Sbjct: 111 -YAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYV---------- 156
Query: 703 TPSSSIGLKGTVGYVAPE 720
P + L GT Y+APE
Sbjct: 157 -PDVTYXLCGTPDYIAPE 173
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 39/215 (18%)
Query: 526 LSKATGEFSSSNMI-----GQGSFGYVYKGTL-----GEDEMIVAVKVINLKYKGAS-RS 574
L EF N++ G+G FG V K T VAVK++ + R
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD 72
Query: 575 FVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSD------ 628
++E L+ + H ++IK+ CS G + EY + GSL+ +L +S
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGACSQD---GPLL--LIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 629 ------------DQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLD 676
D + L++ ++ A ++ M+YL + +VH DL N+L+
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVA 184
Query: 677 HDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
+ DFGL++ + ++ D+ VK I +K
Sbjct: 185 EGRKMKISDFGLSRDV--YEEDSXVKRSQGRIPVK 217
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 18/206 (8%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNL 590
+++ + IG+G++G V +++ VA+K I+ +++ + + E + L RH N+
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVAS 650
I I I + + V + ME K Q +C L Q +
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF-LYQ-------ILR 137
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
++Y+H ++H DLKPSN+LL+ +CDFGLA+ T T +
Sbjct: 138 GLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA--- 191
Query: 711 KGTVGYVAPEYGMGSEA-SMTGDIFT 735
T Y APE + S+ + + DI++
Sbjct: 192 --TRWYRAPEIMLNSKGYTKSIDIWS 215
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 108/254 (42%), Gaps = 40/254 (15%)
Query: 200 TVINFGIGRNQISGTIPPGIRNLVNLIGFGAEENQLHGTIPDAIGELKNLQKLCLFRNFL 259
T INF NQ++ P ++NL L+ NQ+ P + L NL L LF N +
Sbjct: 66 TQINFS--NNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQI 119
Query: 260 QGRIPSGLGNLTKLANLELSSNSLQGNIPSSLGNCQNLMSFTASQNKLTGALPHQLLSIT 319
P L NLT L LELSSN++ S+L +L N++T P L ++T
Sbjct: 120 TDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLNFG-NQVTDLKP--LANLT 172
Query: 320 TXXXXXXXXXXXXXXXXXXQVGHLKNLVILDISSNQFSGVIP------------------ 361
T ++ +L++L+ ++NQ S + P
Sbjct: 173 TLERLDISSNKVSDISVLAKLTNLESLI---ATNNQISDITPLGILTNLDELSLNGNQLK 229
Query: 362 --GTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNVSSNNLSGQIPEFLKNLSVLE 419
GTL++ L LD+++N + P LS L + EL + +N +S P L L+ L
Sbjct: 230 DIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALT 285
Query: 420 FLSLSYNHFEGEVP 433
L L+ N E P
Sbjct: 286 NLELNENQLEDISP 299
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 18/206 (8%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNL 590
+++ + IG+G++G V +++ VA++ I+ +++ + + E + L RH N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVAS 650
I I I + + V + ME K Q +C L Q +
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF-LYQ-------ILR 139
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
++Y+H ++H DLKPSN+LL+ +CDFGLA+ T T +
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA--- 193
Query: 711 KGTVGYVAPEYGMGSEA-SMTGDIFT 735
T Y APE + S+ + + DI++
Sbjct: 194 --TRWYRAPEIMLNSKGYTKSIDIWS 217
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 94/235 (40%), Gaps = 58/235 (24%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY----------------------- 568
+++ + IG+GS+G V D A+KV++ K
Sbjct: 14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGC 73
Query: 569 ---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH 625
+G E L+ + H N++K++ + D D VFE + G +
Sbjct: 74 IQPRGPIEQVYQEIAILKKLDHPNVVKLVEVL---DDPNEDHLYMVFELVNQGPVM---- 126
Query: 626 QSDDQVEVCK-LSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVC 684
+V K LS Q D+ +EYLH+ ++H D+KPSN+L+ D +
Sbjct: 127 ----EVPTLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIA 179
Query: 685 DFGLAKFL--SDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGR 737
DFG++ SD L V TP+ ++APE S T IF+G+
Sbjct: 180 DFGVSNEFKGSDALLSNTVGTPA----------FMAPE-----SLSETRKIFSGK 219
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 96/231 (41%), Gaps = 46/231 (19%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+G G+FG VYK E ++ A KVI+ K + ++ E + L + H N++K++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA-- 102
Query: 599 STDFKGTDFKAFVFEYMENGS-------LKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
F + + E+ G+ L+ L +S QV VCK +L A
Sbjct: 103 ---FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-VCKQTL-----------DA 147
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
+ YLH + ++H DLK N+L D + DFG++ +
Sbjct: 148 LNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSA--------KNTRXIQRRDXFI 196
Query: 712 GTVGYVAPEYGMGSEASMTGDIFTGRRPIDA---VFNEGHSLHEFAKTALP 759
GT ++APE M + RP D V++ G +L E A+ P
Sbjct: 197 GTPYWMAPEVVMCETSK--------DRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 90/205 (43%), Gaps = 37/205 (18%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVA------ECEALRNIRHRNLIK 592
+G G F V K + A K I + ASR V+ E LR + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAM 652
+ + + TD + E + G L D+L Q + E S I+++ +
Sbjct: 80 LHDVYENR----TDV-VLILELVSGGELFDFLAQKESLSEEEATSFIKQI------LDGV 128
Query: 653 EYLHHHCQPPMVHGDLKPSNV-LLDHDM-VAHV--CDFGLAKFLSDHQLDTAVKTPSSSI 708
YLH + H DLKP N+ LLD ++ + H+ DFGLA H+++ V+ +
Sbjct: 129 NYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-----HEIEDGVEFKN--- 177
Query: 709 GLKGTVGYVAPEY----GMGSEASM 729
+ GT +VAPE +G EA M
Sbjct: 178 -IFGTPEFVAPEIVNYEPLGLEADM 201
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 39/215 (18%)
Query: 526 LSKATGEFSSSNMI-----GQGSFGYVYKGTL-----GEDEMIVAVKVINLKYKGAS-RS 574
L EF N++ G+G FG V K T VAVK++ + R
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD 72
Query: 575 FVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSD------ 628
++E L+ + H ++IK+ CS G + EY + GSL+ +L +S
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGACSQD---GPLL--LIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 629 ------------DQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLD 676
D + L++ ++ A ++ M+YL + +VH DL N+L+
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVA 184
Query: 677 HDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
+ DFGL++ + ++ D+ VK I +K
Sbjct: 185 EGRKMKISDFGLSRDV--YEEDSXVKRSQGRIPVK 217
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 90/205 (43%), Gaps = 37/205 (18%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVA------ECEALRNIRHRNLIK 592
+G G F V K + A K I + ASR V+ E LR + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAM 652
+ + + TD + E + G L D+L Q + E S I+++ +
Sbjct: 80 LHDVYENR----TDV-VLILELVSGGELFDFLAQKESLSEEEATSFIKQI------LDGV 128
Query: 653 EYLHHHCQPPMVHGDLKPSNV-LLDHDM-VAHV--CDFGLAKFLSDHQLDTAVKTPSSSI 708
YLH + H DLKP N+ LLD ++ + H+ DFGLA H+++ V+ +
Sbjct: 129 NYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-----HEIEDGVEFKN--- 177
Query: 709 GLKGTVGYVAPEY----GMGSEASM 729
+ GT +VAPE +G EA M
Sbjct: 178 -IFGTPEFVAPEIVNYEPLGLEADM 201
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 90/205 (43%), Gaps = 37/205 (18%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVA------ECEALRNIRHRNLIK 592
+G G F V K + A K I + ASR V+ E LR + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAM 652
+ + + TD + E + G L D+L Q + E S I+++ +
Sbjct: 80 LHDVYENR----TDV-VLILELVSGGELFDFLAQKESLSEEEATSFIKQI------LDGV 128
Query: 653 EYLHHHCQPPMVHGDLKPSNV-LLDHDM-VAHV--CDFGLAKFLSDHQLDTAVKTPSSSI 708
YLH + H DLKP N+ LLD ++ + H+ DFGLA H+++ V+ +
Sbjct: 129 NYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-----HEIEDGVEFKN--- 177
Query: 709 GLKGTVGYVAPEY----GMGSEASM 729
+ GT +VAPE +G EA M
Sbjct: 178 -IFGTPEFVAPEIVNYEPLGLEADM 201
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 37/203 (18%)
Query: 539 IGQGSFGYVYKG-TLGEDE------MIVAVKVINLKYKGASRS-FVAECEALRNI-RHRN 589
+G+G+FG V +G D+ + VAVK++ S V+E E ++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 590 LIKIITICSSTDFKGTDFKAFVF-EYMENGSLKDWLHQSD----------DQVEVCKLSL 638
+I ++ C+ D +V EY G+L+++L ++V +++
Sbjct: 103 IITLLGACTQ------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 639 IQRVNIAIDVASAMEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQL 697
V+ +A MEYL C +H DL NVL+ + V + DFGLA+ +++ +
Sbjct: 157 KDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINN--I 210
Query: 698 DTAVKTPSSSIGLKGTVGYVAPE 720
D KT + + +K ++APE
Sbjct: 211 DYYKKTTNGRLPVK----WMAPE 229
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 37/203 (18%)
Query: 539 IGQGSFGYVYKG-TLGEDE------MIVAVKVINLKYKGASRS-FVAECEALRNI-RHRN 589
+G+G+FG V +G D+ + VAVK++ S V+E E ++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 590 LIKIITICSSTDFKGTDFKAFVF-EYMENGSLKDWLHQSD----------DQVEVCKLSL 638
+I ++ C+ D +V EY G+L+++L ++V +++
Sbjct: 103 IINLLGACTQ------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 639 IQRVNIAIDVASAMEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQL 697
V+ +A MEYL C +H DL NVL+ + V + DFGLA+ +++ +
Sbjct: 157 KDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINN--I 210
Query: 698 DTAVKTPSSSIGLKGTVGYVAPE 720
D KT + + +K ++APE
Sbjct: 211 DYYKKTTNGRLPVK----WMAPE 229
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 37/218 (16%)
Query: 539 IGQGSFGYVYKG-TLGEDE----MIVAVKVINLKYKGASRSF---VAECEALRNI-RHRN 589
+G+G FG V +G D+ V V V LK + V+E E ++ I +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 590 LIKIITICSSTDFKGTDFKAFVF-EYMENGSLKDWLHQSD----------DQVEVCKLSL 638
+I ++ C+ D +V EY G+L+++L ++V +++
Sbjct: 149 IINLLGACTQ------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 202
Query: 639 IQRVNIAIDVASAMEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQL 697
V+ +A MEYL C +H DL NVL+ + V + DFGLA+ +++ +
Sbjct: 203 KDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINN--I 256
Query: 698 DTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
D KT + + +K ++APE + D+++
Sbjct: 257 DYYKKTTNGRLPVK----WMAPEALFDRVYTHQSDVWS 290
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 50.4 bits (119), Expect = 4e-06, Method: Composition-based stats.
Identities = 50/168 (29%), Positives = 71/168 (42%), Gaps = 23/168 (13%)
Query: 539 IGQGSFGYVYKGTLGE---DEMIVAVKVIN---LKYKGASRSFVAECEALRNIRHRNLIK 592
+G GSFG V +G + VAVK + L A F+ E A+ ++ HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAM 652
+ + + K V E GSL D L + + LS A+ VA M
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGM 124
Query: 653 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL---SDHQL 697
YL +H DL N+LL + + DFGL + L DH +
Sbjct: 125 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXV 169
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 39/215 (18%)
Query: 526 LSKATGEFSSSNMI-----GQGSFGYVYKGTL-----GEDEMIVAVKVINLKYKGAS-RS 574
L EF N++ G+G FG V K T VAVK++ + R
Sbjct: 13 LEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD 72
Query: 575 FVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSD------ 628
++E L+ + H ++IK+ CS G + EY + GSL+ +L +S
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGACSQD---GPLL--LIVEYAKYGSLRGFLRESRKVGPGY 127
Query: 629 ------------DQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLD 676
D + L++ ++ A ++ M+YL + +VH DL N+L+
Sbjct: 128 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVA 184
Query: 677 HDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
+ DFGL++ + ++ D+ VK I +K
Sbjct: 185 EGRKMKISDFGLSRDV--YEEDSYVKRSQGRIPVK 217
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 50.4 bits (119), Expect = 4e-06, Method: Composition-based stats.
Identities = 50/166 (30%), Positives = 70/166 (42%), Gaps = 23/166 (13%)
Query: 539 IGQGSFGYVYKGTLGE---DEMIVAVKVIN---LKYKGASRSFVAECEALRNIRHRNLIK 592
+G GSFG V +G + VAVK + L A F+ E A+ ++ HRNLI+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAM 652
+ + + K V E GSL D L + + LS A+ VA M
Sbjct: 80 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGM 128
Query: 653 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL---SDH 695
YL +H DL N+LL + + DFGL + L DH
Sbjct: 129 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 50.4 bits (119), Expect = 4e-06, Method: Composition-based stats.
Identities = 50/166 (30%), Positives = 70/166 (42%), Gaps = 23/166 (13%)
Query: 539 IGQGSFGYVYKGTLGE---DEMIVAVKVIN---LKYKGASRSFVAECEALRNIRHRNLIK 592
+G GSFG V +G + VAVK + L A F+ E A+ ++ HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAM 652
+ + + K V E GSL D L + + LS A+ VA M
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGM 124
Query: 653 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL---SDH 695
YL +H DL N+LL + + DFGL + L DH
Sbjct: 125 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 19/156 (12%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG---ASRSFVAECEALRNIR-HRNLIKII 594
+G+G++G V+K +VAVK I ++ A R+F E L + H N++ ++
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF-REIMILTELSGHENIVNLL 75
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
+ + + + VF+YME LH + L + + + + ++Y
Sbjct: 76 NVLRADNDRDV---YLVFDYMETD-----LHAV---IRANILEPVHKQYVVYQLIKVIKY 124
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690
LH ++H D+KPSN+LL+ + V DFGL++
Sbjct: 125 LH---SGGLLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 50.4 bits (119), Expect = 4e-06, Method: Composition-based stats.
Identities = 50/166 (30%), Positives = 70/166 (42%), Gaps = 23/166 (13%)
Query: 539 IGQGSFGYVYKGTLGE---DEMIVAVKVIN---LKYKGASRSFVAECEALRNIRHRNLIK 592
+G GSFG V +G + VAVK + L A F+ E A+ ++ HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAM 652
+ + + K V E GSL D L + + LS A+ VA M
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGM 124
Query: 653 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL---SDH 695
YL +H DL N+LL + + DFGL + L DH
Sbjct: 125 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 167
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 27/234 (11%)
Query: 531 GEFSSSNMIGQGSFGYVY--KGTLGEDEMIVAVKVINLKYKGAS--RSFVAECEALRNIR 586
G + IG+G+F V + L E VAV++I+ +S + E ++ +
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKE--VAVRIIDKTQLNSSSLQKLFREVRIMKVLN 71
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
H N++K+ + + + T + V EY G + D+L E + +++
Sbjct: 72 HPNIVKLFEVIET---EKTLY--LVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI---- 122
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA-KFLSDHQLDTAVKTPS 705
SA++Y H Q +VH DLK N+LLD DM + DFG + +F ++LD +P
Sbjct: 123 --VSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPP 177
Query: 706 -SSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTAL 758
++ L Y PE + S + + +G P D G +L E + L
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-----GQNLKELRERVL 226
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 37/203 (18%)
Query: 539 IGQGSFGYVYKG-TLGEDE----MIVAVKVINLKYKGASRSF---VAECEALRNI-RHRN 589
+G+G+FG V +G D+ V V V LK + V+E E ++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 590 LIKIITICSSTDFKGTDFKAFVF-EYMENGSLKDWLHQSD----------DQVEVCKLSL 638
+I ++ C+ D +V EY G+L+++L ++V +++
Sbjct: 103 IIHLLGACTQ------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 639 IQRVNIAIDVASAMEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQL 697
V+ +A MEYL C +H DL NVL+ + V + DFGLA+ +++ +
Sbjct: 157 KDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINN--I 210
Query: 698 DTAVKTPSSSIGLKGTVGYVAPE 720
D KT + + +K ++APE
Sbjct: 211 DYYKKTTNGRLPVK----WMAPE 229
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 95/192 (49%), Gaps = 23/192 (11%)
Query: 535 SSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFV-AECEALRNIR-HRNLIK 592
+S ++G+G++ V ++ AVK+I K G SRS V E E L + ++N+++
Sbjct: 17 TSELLGEGAYAKVQGAVSLQNGKEYAVKIIE-KQAGHSRSRVFREVETLYQCQGNKNILE 75
Query: 593 IITICSSTDFKGTDFKAF-VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
+I +F D + + VFE ++ GS+ + + + + + DVA+A
Sbjct: 76 LI------EFFEDDTRFYLVFEKLQGGSILAHIQKQK------HFNEREASRVVRDVAAA 123
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDH-DMVA--HVCDFGLAKFLSDHQLDTAVKTPSSSI 708
+++LH + H DLKP N+L + + V+ +CDF L + + T + TP +
Sbjct: 124 LDFLH---TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTT 180
Query: 709 GLKGTVGYVAPE 720
G+ Y+APE
Sbjct: 181 PC-GSAEYMAPE 191
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 94/218 (43%), Gaps = 41/218 (18%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIIT 595
IG+GSFG V + + + A+K +N + + R+ E + ++ + H L+ +
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 596 ICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDD-QVEVCKLSLIQRVNIAIDVASAMEY 654
F+ + V + + G L+ L Q+ + E KL + + V A++Y
Sbjct: 83 -----SFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELV-------MALDY 130
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L + ++H D+KP N+LLD H+ DF +A L +T + T + GT
Sbjct: 131 LQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP---RETQITT------MAGTK 178
Query: 715 GYVAPE---------YGMGSEASMTG----DIFTGRRP 739
Y+APE Y + G ++ GRRP
Sbjct: 179 PYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 33/171 (19%)
Query: 560 AVKVINLKYKGA---------SRSFVAECEALRNIR-HRNLIKIITICSSTDFKGTDFKA 609
AVK+I++ G+ + + E + LR + H N+I++ ++ F
Sbjct: 46 AVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQL-----KDTYETNTFFF 100
Query: 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLK 669
VF+ M+ G L D+L ++V + + + + ++V A+ L+ +VH DLK
Sbjct: 101 LVFDLMKKGELFDYL---TEKVTLSEKETRKIMRALLEVICALHKLN------IVHRDLK 151
Query: 670 PSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
P N+LLD DM + DFG + QLD K S + GT Y+APE
Sbjct: 152 PENILLDDDMNIKLTDFGFSC-----QLDPGEKLRS----VCGTPSYLAPE 193
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 23/243 (9%)
Query: 520 MVSYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGAS--RSFVA 577
+ S A+ G + IG+G+F V VA+K+I+ + +
Sbjct: 4 IASCADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR 63
Query: 578 ECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLS 637
E ++ + H N++K+ + + + T + + EY G + D+L E S
Sbjct: 64 EVRIMKILNHPNIVKLFEVIET---EKTLY--LIMEYASGGEVFDYLVAHGRMKEKEARS 118
Query: 638 LIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA-KFLSDHQ 696
+++ SA++Y H Q +VH DLK N+LLD DM + DFG + +F +
Sbjct: 119 KFRQI------VSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK 169
Query: 697 LDTAVKTPS-SSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK 755
LD P ++ L Y PE + S + + +G P D G +L E +
Sbjct: 170 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-----GQNLKELRE 224
Query: 756 TAL 758
L
Sbjct: 225 RVL 227
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 85/196 (43%), Gaps = 35/196 (17%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEM---IVAVKVINLK-YKGASRSFVAECEALRNIRHR 588
F +G G+F V L E++ + AVK I K KG S E LR I+H
Sbjct: 24 FEFKETLGTGAFSEV---VLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHE 80
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N++ + I ++ + V + + G L D + + E +LI++ V
Sbjct: 81 NIVALEDI-----YESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQ------V 129
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVCDFGLAKFLSDHQ-LDTAVKTP 704
A+ YLH + +VH DLKP N+L D + + DFGL+K + TA TP
Sbjct: 130 LDAVYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTP 186
Query: 705 SSSIGLKGTVGYVAPE 720
GYVAPE
Sbjct: 187 ----------GYVAPE 192
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 37/188 (19%)
Query: 532 EFSSSNM-----IGQGSFGYVYKGT-LGEDE----MIVAVKVINLKYKGASR-SFVAECE 580
EF N+ +G G+FG V T G + + VAVK++ K + R + ++E +
Sbjct: 41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELK 100
Query: 581 ALRNI-RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQ-----SDDQVEV- 633
+ + H N++ ++ C+ G + +FEY G L ++L S+D++E
Sbjct: 101 MMTQLGSHENIVNLLGACT---LSGPIY--LIFEYCCYGDLLNYLRSKREKFSEDEIEYE 155
Query: 634 --CKLSLIQRVNI---------AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH 682
+L + +N+ A VA ME+L VH DL NVL+ H V
Sbjct: 156 NQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHGKVVK 212
Query: 683 VCDFGLAK 690
+CDFGLA+
Sbjct: 213 ICDFGLAR 220
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 70/166 (42%), Gaps = 23/166 (13%)
Query: 539 IGQGSFGYVYKGTLGE---DEMIVAVKVIN---LKYKGASRSFVAECEALRNIRHRNLIK 592
+G GSFG V +G + VAVK + L A F+ E A+ ++ HRNLI+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAM 652
+ + + K V E GSL D L + + LS A+ VA M
Sbjct: 86 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGM 134
Query: 653 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL---SDH 695
YL +H DL N+LL + + DFGL + L DH
Sbjct: 135 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 87/186 (46%), Gaps = 25/186 (13%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+G+G++G V K I+AVK I R+ V E R + ++ C
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRI--------RATVNSQEQKRLLMDLDISMRTVDCP 110
Query: 599 ST-DFKGTDFK---AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
T F G F+ ++ + + SL + Q D+ + ++ + IA+ + A+E+
Sbjct: 111 FTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGK--IAVSIVKALEH 168
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
LH ++H D+KPSNVL++ +CDFG++ +L +D+ KT + G
Sbjct: 169 LHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL----VDSVAKTIDA-----GCK 217
Query: 715 GYVAPE 720
Y+APE
Sbjct: 218 PYMAPE 223
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNL 590
+++ + IG+G++G V +++ VA+K I+ +++ + + E + L RH N+
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGSLKDWL---HQSDDQVEVCKLSLIQRVNIAID 647
I I I + + ++ ++ L L H S+D + C L Q
Sbjct: 104 IGINDIIRAPTIEQMK-DVYLVTHLMGADLYKLLKTQHLSNDHI--CYF-LYQ------- 152
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
+ ++Y+H ++H DLKPSN+LL+ +CDFGLA+ T T +
Sbjct: 153 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 708 IGLKGTVGYVAPEYGMGSEA-SMTGDIFT 735
T Y APE + S+ + + DI++
Sbjct: 210 -----TRWYRAPEIMLNSKGYTKSIDIWS 233
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 37/218 (16%)
Query: 539 IGQGSFGYVYKG-TLGEDE------MIVAVKVINLKYKGASRS-FVAECEALRNI-RHRN 589
+G+G FG V +G D+ + VAVK++ S V+E E ++ I +H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 590 LIKIITICSSTDFKGTDFKAFVF-EYMENGSLKDWLHQSD----------DQVEVCKLSL 638
+I ++ C+ D +V EY G+L+++L ++V +++
Sbjct: 90 IINLLGACTQ------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 143
Query: 639 IQRVNIAIDVASAMEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQL 697
V+ +A MEYL C +H DL NVL+ + V + DFGLA+ +++ +
Sbjct: 144 KDLVSCTYQLARGMEYLASQKC----IHRDLTARNVLVTENNVMKIADFGLARDINN--I 197
Query: 698 DTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
D KT + + +K ++APE + D+++
Sbjct: 198 DYYKKTTNGRLPVK----WMAPEALFDRVYTHQSDVWS 231
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/161 (19%), Positives = 71/161 (44%), Gaps = 15/161 (9%)
Query: 575 FVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVC 634
F E + + H ++ + + G V EY++ +L+D +H
Sbjct: 59 FRREAQNAAALNHPAIVAVYATGEAETPAGP-LPYIVMEYVDGVTLRDIVHTE------G 111
Query: 635 KLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSD 694
++ + + + D A+ + H + ++H D+KP+N+++ V DFG+A+ ++D
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD 168
Query: 695 HQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
+ + + + + GT Y++PE G D+++
Sbjct: 169 -----SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 204
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 76/160 (47%), Gaps = 12/160 (7%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG--ASRSFVAECEALRNIRHRNL 590
+ ++IG GS+G+V + ++ +VA+K I ++ + + E L + H ++
Sbjct: 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHV 114
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVAS 650
+K++ I D + D V E + + K E+ +L+ + + +
Sbjct: 115 VKVLDIVIPKDVEKFDELYVVLE-IADSDFKKLFRTPVYLTELHIKTLLYNLLVGV---- 169
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690
+Y+H ++H DLKP+N L++ D VCDFGLA+
Sbjct: 170 --KYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLAR 204
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 18/206 (8%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNL 590
+++ + IG+G++G V +++ VA+K I+ +++ + + E + L RH N+
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVAS 650
I I I + + V + ME K Q +C L Q +
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF-LYQ-------ILR 139
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
++Y+H ++H DLKPSN+LL+ +CDFGLA+ T +
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA--- 193
Query: 711 KGTVGYVAPEYGMGSEA-SMTGDIFT 735
T Y APE + S+ + + DI++
Sbjct: 194 --TRWYRAPEIMLNSKGYTKSIDIWS 217
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 18/206 (8%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNL 590
+++ + IG+G++G V +++ VA+K I+ +++ + + E + L RH N+
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVAS 650
I I I + + V + ME K Q +C L Q +
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF-LYQ-------ILR 140
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
++Y+H ++H DLKPSN+LL+ +CDFGLA+ T +
Sbjct: 141 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA--- 194
Query: 711 KGTVGYVAPEYGMGSEA-SMTGDIFT 735
T Y APE + S+ + + DI++
Sbjct: 195 --TRWYRAPEIMLNSKGYTKSIDIWS 218
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 70/166 (42%), Gaps = 23/166 (13%)
Query: 539 IGQGSFGYVYKGTLGE---DEMIVAVKVIN---LKYKGASRSFVAECEALRNIRHRNLIK 592
+G GSFG V +G + VAVK + L A F+ E A+ ++ HRNLI+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAM 652
+ + + K V E GSL D L + + LS A+ VA M
Sbjct: 86 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGM 134
Query: 653 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL---SDH 695
YL +H DL N+LL + + DFGL + L DH
Sbjct: 135 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 14/166 (8%)
Query: 528 KATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG--ASRSFVAECEALRNI 585
K + ++IG+GS+GYVY VA+K +N ++ + + E L +
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL 84
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVN-I 644
+ +I++ + D D V E + + LK E Q V I
Sbjct: 85 KSDYIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKKLFKTPIFLTE-------QHVKTI 136
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690
++ +++H + ++H DLKP+N LL+ D +CDFGLA+
Sbjct: 137 LYNLLLGEKFIH---ESGIIHRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 37/203 (18%)
Query: 539 IGQGSFGYVYKG-TLGEDE------MIVAVKVINLKYKGASRS-FVAECEALRNI-RHRN 589
+G+G FG V +G D+ + VAVK++ S V+E E ++ I +H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 590 LIKIITICSSTDFKGTDFKAFVF-EYMENGSLKDWLHQSD----------DQVEVCKLSL 638
+I ++ C+ D +V EY G+L+++L ++V +++
Sbjct: 92 IINLLGACTQ------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 145
Query: 639 IQRVNIAIDVASAMEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQL 697
V+ +A MEYL C +H DL NVL+ + V + DFGLA+ +++ +
Sbjct: 146 KDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINN--I 199
Query: 698 DTAVKTPSSSIGLKGTVGYVAPE 720
D KT + + +K ++APE
Sbjct: 200 DYYKKTTNGRLPVK----WMAPE 218
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 61/126 (48%), Gaps = 14/126 (11%)
Query: 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLK 669
V EY++ +L+D +H ++ + + + D A+ + H + ++H D+K
Sbjct: 93 IVMEYVDGVTLRDIVHTE------GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVK 143
Query: 670 PSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASM 729
P+N+++ V DFG+A+ ++D + + + + + GT Y++PE G
Sbjct: 144 PANIMISATNAVKVMDFGIARAIAD-----SGNSVTQTAAVIGTAQYLSPEQARGDSVDA 198
Query: 730 TGDIFT 735
D+++
Sbjct: 199 RSDVYS 204
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 27/187 (14%)
Query: 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITI 596
++G G+F V+ + A+K I S E L+ I+H N++ + I
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 597 CSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLH 656
++ T V + + G L D + + E +IQ+ V SA++YLH
Sbjct: 75 -----YESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQ------VLSAVKYLH 123
Query: 657 HHCQPPMVHGDLKPSNVLL---DHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGT 713
+ +VH DLKP N+L + + + DFGL+K + + TA TP
Sbjct: 124 EN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTP--------- 171
Query: 714 VGYVAPE 720
GYVAPE
Sbjct: 172 -GYVAPE 177
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 70/166 (42%), Gaps = 23/166 (13%)
Query: 539 IGQGSFGYVYKGTLGE---DEMIVAVKVIN---LKYKGASRSFVAECEALRNIRHRNLIK 592
+G GSFG V +G + VAVK + L A F+ E A+ ++ HRNLI+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAM 652
+ + + K V E GSL D L + + LS A+ VA M
Sbjct: 80 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGM 128
Query: 653 EYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL---SDH 695
YL +H DL N+LL + + DFGL + L DH
Sbjct: 129 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 171
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 37/203 (18%)
Query: 539 IGQGSFGYVYKG-TLGEDE----MIVAVKVINLKYKGASRSF---VAECEALRNI-RHRN 589
+G+G FG V +G D+ V V V LK + V+E E ++ I +H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 590 LIKIITICSSTDFKGTDFKAFVF-EYMENGSLKDWLHQSD----------DQVEVCKLSL 638
+I ++ C+ D +V EY G+L+++L ++V +++
Sbjct: 95 IINLLGACTQ------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 148
Query: 639 IQRVNIAIDVASAMEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQL 697
V+ +A MEYL C +H DL NVL+ + V + DFGLA+ +++ +
Sbjct: 149 KDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINN--I 202
Query: 698 DTAVKTPSSSIGLKGTVGYVAPE 720
D KT + + +K ++APE
Sbjct: 203 DYYKKTTNGRLPVK----WMAPE 221
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 21/167 (12%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+G G G V+ + + VA+K I L + + + E + +R + H N++K+ I
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 599 STDFKGTDFKA---------FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+ + TD V EYME L + L Q E +L + Q +
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQGPLLEEHARLFMYQ-------LL 130
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLD-HDMVAHVCDFGLAKFLSDH 695
++Y+H ++H DLKP+N+ ++ D+V + DFGLA+ + H
Sbjct: 131 RGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPH 174
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 83/193 (43%), Gaps = 29/193 (15%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK-YKGASRSFVAECEALRNIRHRNLI 591
+ +++G G+F V + +VA+K I K +G S E L I+H N++
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
+ I ++ + + + G L D + + E LI V A
Sbjct: 80 ALDDI-----YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI------FQVLDA 128
Query: 652 MEYLHHHCQPPMVHGDLKPSNVL---LDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
++YLH +VH DLKP N+L LD D + DFGL+K ++ P S +
Sbjct: 129 VKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK----------MEDPGSVL 175
Query: 709 GLK-GTVGYVAPE 720
GT GYVAPE
Sbjct: 176 STACGTPGYVAPE 188
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 20/163 (12%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVAECEALRNIRHRN 589
++ IG+G++G V+K E IVA+K + L +G S + E L+ ++H+N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 590 LIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH--QSDDQVEVCKLSLIQRVNIAID 647
++++ + S D K T VFE+ + LK + D E+ K L Q
Sbjct: 63 IVRLHDVLHS-DKKLT----LVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQ------- 109
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690
+ + + H ++H DLKP N+L++ + + +FGLA+
Sbjct: 110 LLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 89/205 (43%), Gaps = 37/205 (18%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVA------ECEALRNIRHRNLIK 592
+G G F V K + A K I + ASR V E LR + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAM 652
+ + + TD + E + G L D+L Q + E S I+++ +
Sbjct: 80 LHDVYENR----TDV-VLILELVSGGELFDFLAQKESLSEEEATSFIKQI------LDGV 128
Query: 653 EYLHHHCQPPMVHGDLKPSNV-LLDHDM-VAHV--CDFGLAKFLSDHQLDTAVKTPSSSI 708
YLH + H DLKP N+ LLD ++ + H+ DFGLA H+++ V+ +
Sbjct: 129 NYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-----HEIEDGVEFKN--- 177
Query: 709 GLKGTVGYVAPEY----GMGSEASM 729
+ GT +VAPE +G EA M
Sbjct: 178 -IFGTPEFVAPEIVNYEPLGLEADM 201
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 27/192 (14%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASR--SFVAECEALRNIRHRNL 590
+S IG G V++ L E + I A+K +NL+ S+ E L ++ +
Sbjct: 14 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS- 71
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGS--LKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
KII + D++ TD +++ ME G+ L WL + + +R + ++
Sbjct: 72 DKIIRL---YDYEITD--QYIYMVMECGNIDLNSWLKKKK------SIDPWERKSYWKNM 120
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
A+ +H H +VH DLKP+N L+ M+ + DFG+A + Q DT S +
Sbjct: 121 LEAVHTIHQHG---IVHSDLKPANFLIVDGMLK-LIDFGIANQM---QPDTTSVVKDSQV 173
Query: 709 GLKGTVGYVAPE 720
GTV Y+ PE
Sbjct: 174 ---GTVNYMPPE 182
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 27/192 (14%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASR--SFVAECEALRNIRHRNL 590
+S IG G V++ L E + I A+K +NL+ S+ E L ++ +
Sbjct: 11 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS- 68
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGS--LKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
KII + D++ TD +++ ME G+ L WL + + +R + ++
Sbjct: 69 DKIIRL---YDYEITD--QYIYMVMECGNIDLNSWLKKKKS------IDPWERKSYWKNM 117
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
A+ +H H +VH DLKP+N L+ M+ + DFG+A + Q DT S +
Sbjct: 118 LEAVHTIHQHG---IVHSDLKPANFLIVDGMLK-LIDFGIANQM---QPDTTSVVKDSQV 170
Query: 709 GLKGTVGYVAPE 720
GTV Y+ PE
Sbjct: 171 ---GTVNYMPPE 179
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 61/126 (48%), Gaps = 14/126 (11%)
Query: 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLK 669
V EY++ +L+D +H ++ + + + D A+ + H Q ++H D+K
Sbjct: 110 IVMEYVDGVTLRDIVHTE------GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVK 160
Query: 670 PSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASM 729
P+N+++ V DFG+A+ ++D + + + + + GT Y++PE G
Sbjct: 161 PANIMISATNAVKVMDFGIARAIAD-----SGNSVTQTAAVIGTAQYLSPEQARGDSVDA 215
Query: 730 TGDIFT 735
D+++
Sbjct: 216 RSDVYS 221
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 80/174 (45%), Gaps = 26/174 (14%)
Query: 530 TGE-----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRN 584
TGE +++ +IG GSFG V++ L E + + KV+ K R E + +R
Sbjct: 34 TGEQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK-----RFKNRELQIMRI 88
Query: 585 IRHRNLIKIIT-ICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQ----VEVCKLSLI 639
++H N++ + S+ D K F V EY+ + H + + + + KL +
Sbjct: 89 VKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMY 148
Query: 640 QRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVCDFGLAKFL 692
Q + ++ Y+H + H D+KP N+LLD V + DFG AK L
Sbjct: 149 Q-------LLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 35/198 (17%)
Query: 532 EFSSSNMIGQGSFGYVY--KGTLGED-EMIVAVKVIN---LKYKGASRSFVAECEALRNI 585
+F ++GQGSFG V+ K G D + A+KV+ LK + R+ + E + L +
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM-ERDILVEV 83
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLK---DWLHQSDDQVEVCKLSLIQRV 642
H ++K+ + + G L D+L D + K +
Sbjct: 84 NHPFIVKL-----------------HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE 126
Query: 643 NIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVK 702
++ +A L H +++ DLKP N+LLD + + DFGL+K DH+
Sbjct: 127 DVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE------ 180
Query: 703 TPSSSIGLKGTVGYVAPE 720
+ GTV Y+APE
Sbjct: 181 --KKAYSFCGTVEYMAPE 196
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 514 MEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
M ++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 570 G---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQ 626
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 61 SIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKX 119
Query: 627 ---SDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 120 QKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDXELKI 166
Query: 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
DFGLA+ D G T Y APE
Sbjct: 167 LDFGLARHTDDEM-----------TGYVATRWYRAPE 192
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 27/192 (14%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASR--SFVAECEALRNIRHRNL 590
+S IG G V++ L E + I A+K +NL+ S+ E L ++ +
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS- 115
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGS--LKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
KII + D++ TD +++ ME G+ L WL + + +R + ++
Sbjct: 116 DKIIRL---YDYEITD--QYIYMVMECGNIDLNSWLKKKK------SIDPWERKSYWKNM 164
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
A+ +H H +VH DLKP+N L+ M+ + DFG+A + Q DT S +
Sbjct: 165 LEAVHTIHQHG---IVHSDLKPANFLIVDGMLK-LIDFGIANQM---QPDTTSVVKDSQV 217
Query: 709 GLKGTVGYVAPE 720
GTV Y+ PE
Sbjct: 218 ---GTVNYMPPE 226
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 27/192 (14%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASR--SFVAECEALRNIRHRNL 590
+S IG G V++ L E + I A+K +NL+ S+ E L ++ +
Sbjct: 10 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS- 67
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGS--LKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
KII + D++ TD +++ ME G+ L WL + + +R + ++
Sbjct: 68 DKIIRL---YDYEITD--QYIYMVMECGNIDLNSWLKKKKS------IDPWERKSYWKNM 116
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
A+ +H H +VH DLKP+N L+ M+ + DFG+A + Q DT S +
Sbjct: 117 LEAVHTIHQHG---IVHSDLKPANFLIVDGMLK-LIDFGIANQM---QPDTTSVVKDSQV 169
Query: 709 GLKGTVGYVAPE 720
GTV Y+ PE
Sbjct: 170 ---GTVNYMPPE 178
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 27/192 (14%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASR--SFVAECEALRNIRHRNL 590
+S IG G V++ L E + I A+K +NL+ S+ E L ++ +
Sbjct: 30 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS- 87
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGS--LKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
KII + D++ TD +++ ME G+ L WL + + +R + ++
Sbjct: 88 DKIIRL---YDYEITD--QYIYMVMECGNIDLNSWLKKKK------SIDPWERKSYWKNM 136
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
A+ +H H +VH DLKP+N L+ M+ + DFG+A + Q DT S +
Sbjct: 137 LEAVHTIHQHG---IVHSDLKPANFLIVDGMLK-LIDFGIANQM---QPDTTSVVKDSQV 189
Query: 709 GLKGTVGYVAPE 720
GTV Y+ PE
Sbjct: 190 ---GTVNYMPPE 198
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 23/182 (12%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
IG+GS G V T VAVK ++L+ + E +R+ H N++ +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMY---- 108
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
+ + D V E++E G+L D + + +++ Q + + V A+ YLH+
Sbjct: 109 -SSYLVGDELWVVMEFLEGGALTDIVTHT-------RMNEEQIATVCLSVLRALSYLHNQ 160
Query: 659 CQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVA 718
++H D+K ++LL D + DFG +S K L GT ++A
Sbjct: 161 G---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVS--------KEVPKRKXLVGTPYWMA 209
Query: 719 PE 720
PE
Sbjct: 210 PE 211
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 87/177 (49%), Gaps = 23/177 (12%)
Query: 560 AVKVINLKYKGASRSFV-AECEALRNIR-HRNLIKIITICSSTDFKGTDFKAFVFEYMEN 617
AVK+I K G RS V E E L + HRN+++ F+ D VFE M
Sbjct: 42 AVKIIE-KQPGHIRSRVFREVEMLYQCQGHRNVLE-----LIEFFEEEDRFYLVFEKMRG 95
Query: 618 GSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDH 677
GS+ +H+ E+ ++Q DVASA+++LH+ + H DLKP N+L +H
Sbjct: 96 GSILSHIHKRRHFNELEASVVVQ------DVASALDFLHNK---GIAHRDLKPENILCEH 146
Query: 678 -DMVA--HVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEY--GMGSEASM 729
+ V+ +CDFGL + + + + TP + G+ Y+APE EAS+
Sbjct: 147 PNQVSPVKICDFGLGSGIKLNGDCSPISTP-ELLTPCGSAEYMAPEVVEAFSEEASI 202
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 27/192 (14%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGAS--RSFVAECEALRNIRHRNL 590
+S IG G V++ L E + I A+K +NL+ S+ E L ++ +
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS- 115
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGS--LKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
KII + D++ TD +++ ME G+ L WL + + +R + ++
Sbjct: 116 DKIIRL---YDYEITD--QYIYMVMECGNIDLNSWLKKKK------SIDPWERKSYWKNM 164
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
A+ +H H +VH DLKP+N L+ M+ + DFG+A + Q DT S +
Sbjct: 165 LEAVHTIHQHG---IVHSDLKPANFLIVDGMLK-LIDFGIANQM---QPDTTSVVKDSQV 217
Query: 709 GLKGTVGYVAPE 720
GTV Y+ PE
Sbjct: 218 ---GTVNYMPPE 226
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 33/171 (19%)
Query: 560 AVKVINLKYKGA---------SRSFVAECEALRNIR-HRNLIKIITICSSTDFKGTDFKA 609
AVK+I++ G+ + + E + LR + H N+I++ ++ F
Sbjct: 33 AVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQL-----KDTYETNTFFF 87
Query: 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLK 669
VF+ M+ G L D+L + +V + + + + ++V A+ L+ +VH DLK
Sbjct: 88 LVFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICALHKLN------IVHRDLK 138
Query: 670 PSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
P N+LLD DM + DFG + QLD K GT Y+APE
Sbjct: 139 PENILLDDDMNIKLTDFGFS-----CQLDPGEKLREVC----GTPSYLAPE 180
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 96/224 (42%), Gaps = 45/224 (20%)
Query: 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI--NLKYKG---------ASRSFVAEC 579
G++ I G G++Y L D + V+ L + G A R F+AE
Sbjct: 80 GQYEVKGCIAHGGLGWIY---LALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAE- 135
Query: 580 EALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLI 639
+ H ++++I TD G V EY+ SLK +S Q KL +
Sbjct: 136 -----VVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLK----RSKGQ----KLPVA 182
Query: 640 QRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDT 699
+ + +++ A+ YLH +V+ DLKP N++L + + + D G
Sbjct: 183 EAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEEQL-KLIDLG------------ 226
Query: 700 AVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAV 743
AV +S L GT G+ APE + + ++ DI+T R + A+
Sbjct: 227 AVSRINSFGYLYGTPGFQAPEI-VRTGPTVATDIYTVGRTLAAL 269
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 35/198 (17%)
Query: 532 EFSSSNMIGQGSFGYVY--KGTLGED-EMIVAVKVIN---LKYKGASRSFVAECEALRNI 585
+F ++GQGSFG V+ K G D + A+KV+ LK + R+ + E + L +
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM-ERDILVEV 84
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLK---DWLHQSDDQVEVCKLSLIQRV 642
H ++K+ + + G L D+L D + K +
Sbjct: 85 NHPFIVKL-----------------HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE 127
Query: 643 NIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVK 702
++ +A L H +++ DLKP N+LLD + + DFGL+K DH+
Sbjct: 128 DVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE------ 181
Query: 703 TPSSSIGLKGTVGYVAPE 720
+ GTV Y+APE
Sbjct: 182 --KKAYSFCGTVEYMAPE 197
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 102/233 (43%), Gaps = 36/233 (15%)
Query: 514 MEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
M ++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 570 G---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 61 SIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 626 --QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 120 QKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS-EASMTGDIFT 735
DFGLA+ D G T Y APE + + + T DI++
Sbjct: 167 LDFGLARHTDDEM-----------TGYVATRWYRAPEIMLNAMHYNQTVDIWS 208
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 35/198 (17%)
Query: 532 EFSSSNMIGQGSFGYVY--KGTLGED-EMIVAVKVIN---LKYKGASRSFVAECEALRNI 585
+F ++GQGSFG V+ K G D + A+KV+ LK + R+ + E + L +
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM-ERDILVEV 83
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLK---DWLHQSDDQVEVCKLSLIQRV 642
H ++K+ + + G L D+L D + K +
Sbjct: 84 NHPFIVKL-----------------HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE 126
Query: 643 NIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVK 702
++ +A L H +++ DLKP N+LLD + + DFGL+K DH+
Sbjct: 127 DVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE------ 180
Query: 703 TPSSSIGLKGTVGYVAPE 720
+ GTV Y+APE
Sbjct: 181 --KKAYSFCGTVEYMAPE 196
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 102/228 (44%), Gaps = 30/228 (13%)
Query: 516 KQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG- 570
K+ P EL+K E + + + +G G++G V + + +AVK ++ ++
Sbjct: 32 KERPTFYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSI 91
Query: 571 --ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSD 628
A R++ E L++++H N+I ++ + + T + F Y+ + L +
Sbjct: 92 IHAKRTY-RELRLLKHMKHENVIGLLDVFTP----ATSLEEFNDVYLVTHLMGADL---N 143
Query: 629 DQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688
+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D + DFGL
Sbjct: 144 NIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGL 200
Query: 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS-EASMTGDIFT 735
A+ D G T Y APE + +MT DI++
Sbjct: 201 ARHTDDEM-----------TGYVATRWYRAPEIMLNWMHYNMTVDIWS 237
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 20/163 (12%)
Query: 539 IGQGSFGYVYKGTLG-----EDEMIVAVKVINLKYKGASR-SFVAECEALRNIRHRNLIK 592
+G G+FG VY+G + + VAVK + Y F+ E + H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 593 IITICSSTDFKGTDFKAFV-FEYMENGSLKDWLHQSDDQV-EVCKLSLIQRVNIAIDVAS 650
I + + F+ E M G LK +L ++ + + L+++ +++A D+A
Sbjct: 113 CIGVSLQS------LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 166
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVCDFGLAK 690
+YL + +H D+ N LL VA + DFG+A+
Sbjct: 167 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 95/219 (43%), Gaps = 35/219 (15%)
Query: 512 SPMEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK 567
S M ++ P EL+K E + + + +G G++G V + + VAVK ++
Sbjct: 18 SHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP 77
Query: 568 YKG---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWL 624
++ A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 78 FQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 136
Query: 625 H---QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVA 681
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D
Sbjct: 137 KCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCEL 183
Query: 682 HVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
+ DFGLA+ D G T Y APE
Sbjct: 184 KILDFGLARHTDDEM-----------TGYVATRWYRAPE 211
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 514 MEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
M ++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 570 G---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQ 626
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 61 SIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKX 119
Query: 627 ---SDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 120 QKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
DFGLA+ D G T Y APE
Sbjct: 167 LDFGLARHTDDEM-----------TGYVATRWYRAPE 192
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 95/219 (43%), Gaps = 35/219 (15%)
Query: 512 SPMEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK 567
S M ++ P EL+K E + + + +G G++G V + + VAVK ++
Sbjct: 19 SHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP 78
Query: 568 YKG---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWL 624
++ A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 79 FQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 137
Query: 625 H---QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVA 681
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D
Sbjct: 138 KCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCEL 184
Query: 682 HVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
+ DFGLA+ D G T Y APE
Sbjct: 185 KILDFGLARHTDDEM-----------TGYVATRWYRAPE 212
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 33/171 (19%)
Query: 560 AVKVINLKYKGA---------SRSFVAECEALRNIR-HRNLIKIITICSSTDFKGTDFKA 609
AVK+I++ G+ + + E + LR + H N+I++ ++ F
Sbjct: 46 AVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQL-----KDTYETNTFFF 100
Query: 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLK 669
VF+ M+ G L D+L ++V + + + + ++V A+ L+ +VH DLK
Sbjct: 101 LVFDLMKKGELFDYL---TEKVTLSEKETRKIMRALLEVICALHKLN------IVHRDLK 151
Query: 670 PSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
P N+LLD DM + DFG + QLD K GT Y+APE
Sbjct: 152 PENILLDDDMNIKLTDFGFSC-----QLDPGEKLREVC----GTPSYLAPE 193
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 17/124 (13%)
Query: 611 VFEYMENGSLK--DWLHQSDDQVEVCKLSLIQRVNIAID-VASAMEYLHHHCQPPMVHGD 667
++EYMEN S+ D D+ C + IQ + I V ++ Y+H+ + + H D
Sbjct: 121 IYEYMENDSILKFDEYFFVLDKNYTCFIP-IQVIKCIIKSVLNSFSYIHN--EKNICHRD 177
Query: 668 LKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEA 727
+KPSN+L+D + + DFG ++++ D ++ G +GT ++ PE+ +E+
Sbjct: 178 VKPSNILMDKNGRVKLSDFGESEYMVDKKIK----------GSRGTYEFMPPEF-FSNES 226
Query: 728 SMTG 731
S G
Sbjct: 227 SYNG 230
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 37/203 (18%)
Query: 539 IGQGSFGYVYKG-TLGEDE------MIVAVKVINLKYKGASRS-FVAECEALRNI-RHRN 589
+G+G+FG V +G D+ + VAVK++ S V+E E ++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 590 LIKIITICSSTDFKGTDFKAFVF-EYMENGSLKDWLHQSD----------DQVEVCKLSL 638
+I ++ C+ D +V EY G+L+++L ++V +++
Sbjct: 103 IINLLGACTQ------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 639 IQRVNIAIDVASAMEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQL 697
V+ +A MEYL C +H DL NVL+ + V + DFGLA+ +++ +
Sbjct: 157 KDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINN--I 210
Query: 698 DTAVKTPSSSIGLKGTVGYVAPE 720
D T + + +K ++APE
Sbjct: 211 DYYKNTTNGRLPVK----WMAPE 229
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 36/213 (16%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRN------I 585
+F M+G+GSFG V+ + A+K LK EC +
Sbjct: 19 DFELHKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDDVECTMVEKRVLSLAW 76
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVC-KLSLIQRVNI 644
H L + C+ F+ + FV EY+ G L ++ C K L +
Sbjct: 77 EHPFLTHMF--CT---FQTKENLFFVMEYLNGGDLMY-------HIQSCHKFDLSRATFY 124
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK--FLSDHQLDTAVK 702
A ++ +++LH +V+ DLK N+LLD D + DFG+ K L D + +
Sbjct: 125 AAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCG 181
Query: 703 TPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
TP Y+APE +G + + + D ++
Sbjct: 182 TPD----------YIAPEILLGQKYNHSVDWWS 204
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 21/155 (13%)
Query: 537 NMIGQGSFGYVYKGTL-GEDEMIVAVKVINLKYKGAS--RSFVAECEALRNIRHRNLIKI 593
+IG+G FG VY G GE VA+++I+++ ++F E A R RH N++
Sbjct: 39 ELIGKGRFGQVYHGRWHGE----VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLF 94
Query: 594 ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAME 653
+ C S A + + +L + + ++V K IA ++ M
Sbjct: 95 MGACMS-----PPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTR-----QIAQEIVKGMG 144
Query: 654 YLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688
YLH ++H DLK NV D+ V + DFGL
Sbjct: 145 YLH---AKGILHKDLKSKNVFYDNGKVV-ITDFGL 175
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 514 MEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
M ++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 12 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 71
Query: 570 G---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 72 SIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 130
Query: 626 --QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 131 QKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDXELKI 177
Query: 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
DFGLA+ D G T Y APE
Sbjct: 178 LDFGLARHTDDEM-----------TGYVATRWYRAPE 203
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 32/223 (14%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEAL--RNIRHRN 589
+F+ ++G+GSFG V E + A+K+ LK + EC + R + +
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIKI--LKKDVVIQDDDVECTMVEKRVLALLD 77
Query: 590 LIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+T S F+ D FV EY+ G L + Q V K Q V A +++
Sbjct: 78 KPPFLTQLHSC-FQTVDRLYFVMEYVNGGDLMYHIQQ------VGKFKEPQAVFYAAEIS 130
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
+ +LH +++ DLK NV+LD + + DFG+ K +H +D ++
Sbjct: 131 IGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCK---EHMMDGV-----TTRE 179
Query: 710 LKGTVGYVAPE------YGMGSEASMTG----DIFTGRRPIDA 742
GT Y+APE YG + G ++ G+ P D
Sbjct: 180 FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDG 222
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 102/245 (41%), Gaps = 47/245 (19%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINL-----KYKGASRSFVAECEALRNIRHRNLIKI 593
IG+GSFG ED +K IN+ K + SR VA L N++H N+++
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVA---VLANMKHPNIVQY 88
Query: 594 ITICSSTDFKGTDFKAFVFEYMENGSL-------KDWLHQSDDQVEVCKLSLIQRVNIAI 646
F+ V +Y E G L K L Q D Q ++ +
Sbjct: 89 -----RESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQED-----------QILDWFV 132
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSS 706
+ A++++H ++H D+K N+ L D + DFG+A+ L++ V+ +
Sbjct: 133 QICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARV-----LNSTVELARA 184
Query: 707 SIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSL-HEFAKTALPEKVMEI 765
I GT Y++PE + DI+ + V E +L H F ++ V++I
Sbjct: 185 CI---GTPYYLSPEICENKPYNNKSDIWA----LGCVLYELCTLKHAFEAGSMKNLVLKI 237
Query: 766 VDPSL 770
+ S
Sbjct: 238 ISGSF 242
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 514 MEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
M ++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 570 G---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 61 SIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 626 --QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 120 QKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
DFGLA+ D G T Y APE
Sbjct: 167 LDFGLARHTDDEM-----------TGYVATRWYRAPE 192
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 514 MEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
M ++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 570 G---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 61 SIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 626 --QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 120 QKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
DFGLA+ D G T Y APE
Sbjct: 167 LDFGLARHTDDEM-----------TGYVATRWYRAPE 192
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 514 MEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
M ++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 570 G---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 61 SIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 626 --QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 120 QKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
DFGLA+ D G T Y APE
Sbjct: 167 LDFGLARHTDDEM-----------TGYVATRWYRAPE 192
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 79/164 (48%), Gaps = 20/164 (12%)
Query: 536 SNMIGQGSFGYVYKGTLGE---DEMIVAVKVINLKYKGASRS-FVAECEALRNIRHRNLI 591
+ ++G+G FG VY+G +++ VAVK ++ F++E ++N+ H +++
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
K+I I + + E G L +L ++ + ++V L L ++ + A
Sbjct: 73 KLIGIIEE------EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY-----SLQICKA 121
Query: 652 MEYLHH-HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSD 694
M YL +C VH D+ N+L+ + DFGL++++ D
Sbjct: 122 MAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIED 161
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 514 MEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
M ++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 13 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 72
Query: 570 G---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 73 SIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 131
Query: 626 --QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 132 QKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKI 178
Query: 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
DFGLA+ D G T Y APE
Sbjct: 179 LDFGLARHTDDEM-----------TGYVATRWYRAPE 204
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 35/197 (17%)
Query: 533 FSSSNMIGQGSFGYVY---KGTLGEDEMIVAVKVIN---LKYKGASRSFVAECEALRNIR 586
F ++GQGSFG V+ K T + + A+KV+ LK + R+ + E + L ++
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKM-ERDILADVN 88
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLK---DWLHQSDDQVEVCKLSLIQRVN 643
H ++K+ + + G L D+L D + K + +
Sbjct: 89 HPFVVKL-----------------HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEED 131
Query: 644 IAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKT 703
+ +A L H +++ DLKP N+LLD + + DFGL+K DH+
Sbjct: 132 VKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHE------- 184
Query: 704 PSSSIGLKGTVGYVAPE 720
+ GTV Y+APE
Sbjct: 185 -KKAYSFCGTVEYMAPE 200
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 86/208 (41%), Gaps = 39/208 (18%)
Query: 524 AELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEA-- 581
A ++ T ++ +G+G+F V + A K+IN K A E EA
Sbjct: 24 ATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARI 83
Query: 582 LRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSL------KDWLHQSDDQVEVCK 635
R ++H N++++ S F VF+ + G L +++ ++D C
Sbjct: 84 CRLLKHPNIVRLHDSISEEGFH-----YLVFDLVTGGELFEDIVAREYYSEAD--ASHCI 136
Query: 636 LSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHD---MVAHVCDFGLAKFL 692
+++ VN ++H H +VH DLKP N+LL + DFGLA +
Sbjct: 137 HQILESVN----------HIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEV 183
Query: 693 SDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
Q + G GT GY++PE
Sbjct: 184 QGEQ--------QAWFGFAGTPGYLSPE 203
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 514 MEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
M ++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 13 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 72
Query: 570 G---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 73 SIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 131
Query: 626 --QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 132 QKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKI 178
Query: 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
DFGLA+ D G T Y APE
Sbjct: 179 LDFGLARHTDDEM-----------TGYVATRWYRAPE 204
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 514 MEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
M ++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 570 G---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 61 SIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 626 --QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 120 QKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
DFGLA+ D G T Y APE
Sbjct: 167 LDFGLARHTDDEM-----------TGYVATRWYRAPE 192
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 514 MEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
M ++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 570 G---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 61 SIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 626 --QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 120 QKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
DFGLA+ D G T Y APE
Sbjct: 167 LDFGLARHTDDEM-----------TGYVATRWYRAPE 192
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 514 MEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
M ++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 3 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 62
Query: 570 G---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 63 SIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 121
Query: 626 --QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 122 QKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKI 168
Query: 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
DFGLA+ D G T Y APE
Sbjct: 169 LDFGLARHTDDEM-----------TGYVATRWYRAPE 194
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 514 MEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
M ++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 570 G---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 61 SIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 626 --QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 120 QKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
DFGLA+ D G T Y APE
Sbjct: 167 LDFGLARHTDDEM-----------TGXVATRWYRAPE 192
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 37/203 (18%)
Query: 539 IGQGSFGYVYKG-TLGEDE------MIVAVKVINLKYKGASRS-FVAECEALRNI-RHRN 589
+G+G+FG V +G D+ + VAVK++ S V+E E ++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 590 LIKIITICSSTDFKGTDFKAFVF-EYMENGSLKDWLHQSD----------DQVEVCKLSL 638
+I ++ C+ D +V Y G+L+++L ++V +++
Sbjct: 103 IINLLGACTQ------DGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 639 IQRVNIAIDVASAMEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQL 697
V+ +A MEYL C +H DL NVL+ + V + DFGLA+ +++ +
Sbjct: 157 KDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINN--I 210
Query: 698 DTAVKTPSSSIGLKGTVGYVAPE 720
D KT + + +K ++APE
Sbjct: 211 DYYKKTTNGRLPVK----WMAPE 229
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 83/193 (43%), Gaps = 29/193 (15%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK-YKGASRSFVAECEALRNIRHRNLI 591
+ +++G G+F V + +VA+K I + +G S E L I+H N++
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
+ I ++ + + + G L D + + E LI V A
Sbjct: 80 ALDDI-----YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI------FQVLDA 128
Query: 652 MEYLHHHCQPPMVHGDLKPSNVL---LDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
++YLH +VH DLKP N+L LD D + DFGL+K ++ P S +
Sbjct: 129 VKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK----------MEDPGSVL 175
Query: 709 GLK-GTVGYVAPE 720
GT GYVAPE
Sbjct: 176 STACGTPGYVAPE 188
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 514 MEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
M ++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 6 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 65
Query: 570 G---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 66 SIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 124
Query: 626 --QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 125 QKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKI 171
Query: 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
DFGLA+ D G T Y APE
Sbjct: 172 LDFGLARHTDDEM-----------TGYVATRWYRAPE 197
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 514 MEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
M ++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 3 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 62
Query: 570 G---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 63 SIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 121
Query: 626 --QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 122 QKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDSELKI 168
Query: 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
DFGLA+ D G T Y APE
Sbjct: 169 LDFGLARHTDDEM-----------TGYVATRWYRAPE 194
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 514 MEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
M ++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 24 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 83
Query: 570 G---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 84 SIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 142
Query: 626 --QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 143 QKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKI 189
Query: 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
DFGLA+ D G T Y APE
Sbjct: 190 LDFGLARHTDDEM-----------TGYVATRWYRAPE 215
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 74/144 (51%), Gaps = 20/144 (13%)
Query: 539 IGQGSFGYVYKGTLGE-------DEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLI 591
+GQG+F ++KG E E V +KV++ ++ S SF + + H++L+
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
+C F G D V E+++ GSL +L ++ + C ++++ ++ +A +A A
Sbjct: 76 LNYGVC----FCG-DENILVQEFVKFGSLDTYLKKNKN----C-INILWKLEVAKQLAWA 125
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLL 675
M +L + ++HG++ N+LL
Sbjct: 126 MHFLEENT---LIHGNVCAKNILL 146
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 73/144 (50%), Gaps = 20/144 (13%)
Query: 539 IGQGSFGYVYKGTLGE-------DEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLI 591
+GQG+F ++KG E E V +KV++ ++ S SF + + H++L+
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
+C D V E+++ GSL +L ++ + C ++++ ++ +A +A+A
Sbjct: 76 LNYGVCVC-----GDENILVQEFVKFGSLDTYLKKNKN----C-INILWKLEVAKQLAAA 125
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLL 675
M +L + ++HG++ N+LL
Sbjct: 126 MHFLEENT---LIHGNVCAKNILL 146
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 514 MEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
M ++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 570 G---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 61 SIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 626 --QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 120 QKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
DFGLA+ D G T Y APE
Sbjct: 167 LDFGLARHTDDEM-----------TGYVATRWYRAPE 192
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 514 MEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
M ++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 7 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 66
Query: 570 G---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 67 SIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 125
Query: 626 --QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 126 QKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKI 172
Query: 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
DFGLA+ D G T Y APE
Sbjct: 173 LDFGLARHTDDEM-----------TGYVATRWYRAPE 198
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 514 MEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
M ++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 7 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 66
Query: 570 G---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 67 SIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 125
Query: 626 --QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 126 QKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDSELKI 172
Query: 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
DFGLA+ D G T Y APE
Sbjct: 173 LDFGLARHTDDEM-----------TGYVATRWYRAPE 198
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 514 MEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
M ++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 12 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 71
Query: 570 G---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 72 SIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 130
Query: 626 --QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 131 QKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKI 177
Query: 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
DFGLA+ D G T Y APE
Sbjct: 178 LDFGLARHTDDEM-----------TGYVATRWYRAPE 203
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 111/247 (44%), Gaps = 40/247 (16%)
Query: 510 DTSPMEKQFPMVSYAELSKATGEFSSSNM-----IGQGSFGYVYKG-TLGEDEM----IV 559
D P+++ + Y + EF + +G+G+FG V + G D+ V
Sbjct: 4 DELPLDEHCERLPY---DASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTV 60
Query: 560 AVKVINLKYKGAS----RSFVAECEALRNI-RHRNLIKIITICSSTDFKGTDFKAFVFEY 614
AVK++ +GA+ R+ ++E + L +I H N++ ++ C+ G V E+
Sbjct: 61 AVKMLK---EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV-EF 113
Query: 615 MENGSLKDWLHQSDDQVEVCK------LSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDL 668
+ G+L +L ++ K L+L + + VA ME+L +H DL
Sbjct: 114 CKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDL 170
Query: 669 KPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEAS 728
N+LL V +CDFGLA+ + ++ V+ + + LK ++APE +
Sbjct: 171 AARNILLSEKNVVKICDFGLARDI--YKDPDYVRKGDARLPLK----WMAPETIFDRVYT 224
Query: 729 MTGDIFT 735
+ D+++
Sbjct: 225 IQSDVWS 231
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 36/213 (16%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRN------I 585
+F M+G+GSFG V+ + A+K LK EC +
Sbjct: 18 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDDVECTMVEKRVLSLAW 75
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVC-KLSLIQRVNI 644
H L + C+ F+ + FV EY+ G L ++ C K L +
Sbjct: 76 EHPFLTHMF--CT---FQTKENLFFVMEYLNGGDLMY-------HIQSCHKFDLSRATFY 123
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK--FLSDHQLDTAVK 702
A ++ +++LH +V+ DLK N+LLD D + DFG+ K L D + +
Sbjct: 124 AAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCG 180
Query: 703 TPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
TP Y+APE +G + + + D ++
Sbjct: 181 TPD----------YIAPEILLGQKYNHSVDWWS 203
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 514 MEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
M ++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 13 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQ 72
Query: 570 G---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 73 SIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 131
Query: 626 --QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 132 QKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKI 178
Query: 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
DFGLA+ D G T Y APE
Sbjct: 179 LDFGLARHTDDEM-----------TGYVATRWYRAPE 204
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 83/193 (43%), Gaps = 29/193 (15%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK-YKGASRSFVAECEALRNIRHRNLI 591
+ +++G G+F V + +VA+K I + +G S E L I+H N++
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
+ I ++ + + + G L D + + E LI V A
Sbjct: 80 ALDDI-----YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI------FQVLDA 128
Query: 652 MEYLHHHCQPPMVHGDLKPSNVL---LDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
++YLH +VH DLKP N+L LD D + DFGL+K ++ P S +
Sbjct: 129 VKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK----------MEDPGSVL 175
Query: 709 GLK-GTVGYVAPE 720
GT GYVAPE
Sbjct: 176 STACGTPGYVAPE 188
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 90/223 (40%), Gaps = 34/223 (15%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN---LKYKGASRSFVAECEALRNIRHRN 589
F ++G+GSFG V + E + AVKV+ + + E L R+
Sbjct: 25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHP 84
Query: 590 LIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
+ + C F+ D FV E++ G L + +S + + A ++
Sbjct: 85 FLTQLFCC----FQTPDRLFFVMEFVNGGDLMFHIQKSR------RFDEARARFYAAEII 134
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
SA+ +LH +++ DLK NVLLDH+ + DFG+ K + ++
Sbjct: 135 SALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK--------EGICNGVTTAT 183
Query: 710 LKGTVGYVAPE------YGMGSEASMTG----DIFTGRRPIDA 742
GT Y+APE YG + G ++ G P +A
Sbjct: 184 FCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA 226
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 37/203 (18%)
Query: 539 IGQGSFGYVYKG-TLGEDE------MIVAVKVINLKYKGASRS-FVAECEALRNI-RHRN 589
+G+G+FG V +G D+ + VAVK++ S V+E E ++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 590 LIKIITICSSTDFKGTDFKAFVF-EYMENGSLKDWLHQSD----------DQVEVCKLSL 638
+I ++ C+ D +V Y G+L+++L ++V +++
Sbjct: 103 IINLLGACTQ------DGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 639 IQRVNIAIDVASAMEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQL 697
V+ +A MEYL C +H DL NVL+ + V + DFGLA+ +++ +
Sbjct: 157 KDLVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINN--I 210
Query: 698 DTAVKTPSSSIGLKGTVGYVAPE 720
D KT + + +K ++APE
Sbjct: 211 DYYKKTTNGRLPVK----WMAPE 229
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 83/193 (43%), Gaps = 29/193 (15%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK-YKGASRSFVAECEALRNIRHRNLI 591
+ +++G G+F V + +VA+K I + +G S E L I+H N++
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
+ I ++ + + + G L D + + E LI V A
Sbjct: 80 ALDDI-----YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI------FQVLDA 128
Query: 652 MEYLHHHCQPPMVHGDLKPSNVL---LDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
++YLH +VH DLKP N+L LD D + DFGL+K ++ P S +
Sbjct: 129 VKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK----------MEDPGSVL 175
Query: 709 GLK-GTVGYVAPE 720
GT GYVAPE
Sbjct: 176 STACGTPGYVAPE 188
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 79/193 (40%), Gaps = 25/193 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL-KYKGASRSFVAECEALRNIRHRNLI 591
F +G G+FG V+ + +K IN + + AE E L+++ H N+I
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
KI + F+ V E E G L + + + Q LS + + +A
Sbjct: 84 KIFEV-----FEDYHNMYIVMETCEGGELLERIVSA--QARGKALSEGYVAELMKQMMNA 136
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH----VCDFGLAKFLSDHQLDTAVKTPSSS 707
+ Y H +VH DLKP N+L D H + DFGLA+ K+ S
Sbjct: 137 LAYFHSQH---VVHKDLKPENILF-QDTSPHSPIKIIDFGLAELF---------KSDEHS 183
Query: 708 IGLKGTVGYVAPE 720
GT Y+APE
Sbjct: 184 TNAAGTALYMAPE 196
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 16/160 (10%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+G+G++G V K I AVK I R+ V E R + ++ C
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRI--------RATVNSQEQKRLLXDLDISXRTVDCP 93
Query: 599 ST-DFKGTDFK---AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
T F G F+ ++ + + SL + Q D+ + ++ + IA+ + A+E+
Sbjct: 94 FTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGK--IAVSIVKALEH 151
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSD 694
LH ++H D+KPSNVL++ CDFG++ +L D
Sbjct: 152 LHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVD 189
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN-LKYKGASRSFVAECEALRNIRHRNL 590
+++ + IG+G++G V +++ VA+K I+ +++ + + E + L RH N+
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGSLK--DWLHQSDDQVEVCKLSLIQRVNIAIDV 648
I I I + + V + ME K H S+D + C L Q +
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYF-LYQ-------I 133
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
++Y+H ++H DLKPSN+LL+ + DFGLA+ T T +
Sbjct: 134 LRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVA- 189
Query: 709 GLKGTVGYVAPEYGMGSEA-SMTGDIFT 735
T Y APE + S+ + + DI++
Sbjct: 190 ----TRWYRAPEIMLNSKGYTKSIDIWS 213
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 79/185 (42%), Gaps = 15/185 (8%)
Query: 527 SKATGEFSSSNMIGQGSFGYVYK----GTLGEDEMIVAVKVINLKYKGASRSFVAECEAL 582
+K G++ +++G+GS+G V + TL + + K + + E + L
Sbjct: 1 AKLIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLL 60
Query: 583 RNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRV 642
R +RH+N+I+++ + + + + V EY G + + D V + + Q
Sbjct: 61 RRLRHKNVIQLVDVLYNEEKQKM---YMVMEYCVCG-----MQEMLDSVPEKRFPVCQAH 112
Query: 643 NIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVK 702
+ +EYLH +VH D+KP N+LL + G+A+ L D +
Sbjct: 113 GYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCR 169
Query: 703 TPSSS 707
T S
Sbjct: 170 TSQGS 174
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 87/213 (40%), Gaps = 36/213 (16%)
Query: 526 LSKATGEFSS--SNM--IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVA---- 577
L+ GE+S S M +G G+FG+V+ E V VK I K K ++
Sbjct: 15 LAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIK-KEKVLEDCWIEDPKL 73
Query: 578 -----ECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVE 632
E L + H N+IK++ I F+ F V E ++GS D D
Sbjct: 74 GKVTLEIAILSRVEHANIIKVLDI-----FENQGFFQLVME--KHGSGLDLFAFIDRHP- 125
Query: 633 VCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL 692
+L I + SA+ YL ++H D+K N+++ D + DFG A +L
Sbjct: 126 --RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYL 180
Query: 693 SDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS 725
+L GT+ Y APE MG+
Sbjct: 181 ERGKL---------FYTFCGTIEYCAPEVLMGN 204
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 94/219 (42%), Gaps = 35/219 (15%)
Query: 512 SPMEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK 567
S M ++ P EL+K E + + + +G G++G V + VAVK ++
Sbjct: 18 SHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP 77
Query: 568 YKG---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWL 624
++ A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 78 FQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 136
Query: 625 H---QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVA 681
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D
Sbjct: 137 KCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCEL 183
Query: 682 HVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
+ DFGLA+ D G T Y APE
Sbjct: 184 KILDFGLARHTDDEM-----------TGYVATRWYRAPE 211
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 27/192 (14%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGAS--RSFVAECEALRNIRHRNL 590
+S IG G V++ L E + I A+K +NL+ S+ E L ++ +
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS- 115
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGS--LKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
KII + D++ TD +++ ME G+ L WL + + +R + ++
Sbjct: 116 DKIIRL---YDYEITD--QYIYMVMECGNIDLNSWLKKKK------SIDPWERKSYWKNM 164
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
A+ +H H +VH DLKP+N L+ M+ + DFG+A + Q DT S +
Sbjct: 165 LEAVHTIHQHG---IVHSDLKPANFLIVDGMLK-LIDFGIANQM---QPDTTSVVKDSQV 217
Query: 709 GLKGTVGYVAPE 720
G V Y+ PE
Sbjct: 218 ---GAVNYMPPE 226
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 93/216 (43%), Gaps = 29/216 (13%)
Query: 512 SPMEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK 567
S M ++ P EL+K E + + + +G G++G V + VAVK ++
Sbjct: 19 SHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP 78
Query: 568 YKG---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWL 624
++ A R++ E L++++H N+I ++ + + ++ ++ L
Sbjct: 79 FQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL---- 133
Query: 625 HQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVC 684
++ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 134 ---NNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKIL 187
Query: 685 DFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
DFGLA+ D G T Y APE
Sbjct: 188 DFGLARHTDDEM-----------TGYVATRWYRAPE 212
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 93/215 (43%), Gaps = 35/215 (16%)
Query: 516 KQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG- 570
++ P EL+K E + + + IG G++G V + + VAVK ++ ++
Sbjct: 8 QERPTFYRQELNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 67
Query: 571 --ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH--- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 68 IHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 126
Query: 626 QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D + D
Sbjct: 127 LTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDXELKILD 173
Query: 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
FGLA+ D G T Y APE
Sbjct: 174 FGLARHTDDEM-----------TGYVATRWYRAPE 197
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 27/192 (14%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASR--SFVAECEALRNIRHRNL 590
+S IG G V++ L E + I A+K +NL+ S+ E L ++ +
Sbjct: 30 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS- 87
Query: 591 IKIITICSSTDFKGTDFKAFVFEYMENGS--LKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
KII + D++ TD +++ ME G+ L WL + + +R + ++
Sbjct: 88 DKIIRL---YDYEITD--QYIYMVMECGNIDLNSWLKKKK------SIDPWERKSYWKNM 136
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
A+ +H H +VH DLKP+N L+ M+ + DFG+A + Q D S +
Sbjct: 137 LEAVHTIHQHG---IVHSDLKPANFLIVDGMLK-LIDFGIANQM---QPDXXXVVKDSQV 189
Query: 709 GLKGTVGYVAPE 720
GTV Y+ PE
Sbjct: 190 ---GTVNYMPPE 198
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 109/249 (43%), Gaps = 42/249 (16%)
Query: 510 DTSPMEKQFPMVSYAELSKATGEFSSSNM-----IGQGSFGYVYKG-TLGEDEM----IV 559
D P+++ + Y + EF + +G+G+FG V + G D+ V
Sbjct: 6 DELPLDEHCERLPY---DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTV 62
Query: 560 AVKVINLKYKGAS----RSFVAECEALRNI-RHRNLIKIITICSSTDFKGTDFKAFVFEY 614
AVK++ +GA+ R+ ++E + L +I H N++ ++ C+ G V E+
Sbjct: 63 AVKMLK---EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV-EF 115
Query: 615 MENGSLKDWLHQSDDQVEVCK--------LSLIQRVNIAIDVASAMEYLHHHCQPPMVHG 666
+ G+L +L ++ K L+L + + VA ME+L +H
Sbjct: 116 CKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHR 172
Query: 667 DLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSE 726
DL N+LL V +CDFGLA+ + V+ + + LK ++APE
Sbjct: 173 DLAARNILLSEKNVVKICDFGLARDIXKDP--DXVRKGDARLPLK----WMAPETIFDRV 226
Query: 727 ASMTGDIFT 735
++ D+++
Sbjct: 227 YTIQSDVWS 235
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 20/163 (12%)
Query: 539 IGQGSFGYVYKGTLG-----EDEMIVAVKVI-NLKYKGASRSFVAECEALRNIRHRNLIK 592
+G G+FG VY+G + + VAVK + + + F+ E + + H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 593 IITICSSTDFKGTDFKAFV-FEYMENGSLKDWLHQSDDQV-EVCKLSLIQRVNIAIDVAS 650
I + + F+ E M G LK +L ++ + + L+++ +++A D+A
Sbjct: 99 CIGVSLQS------LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 152
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVCDFGLAK 690
+YL + +H D+ N LL VA + DFG+A+
Sbjct: 153 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 83/201 (41%), Gaps = 37/201 (18%)
Query: 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGA------SRSFVAECEALR 583
+ + +G G++G V L +D++ A + I + K + S + + E L+
Sbjct: 20 SDRYQRVKKLGSGAYGEV---LLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 76
Query: 584 NIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVN 643
+ H N++K+ F+ V E G L D+ + K S +
Sbjct: 77 QLDHPNIMKLYEF-----FEDKRNYYLVMEVYRGGEL------FDEIILRQKFSEVDAAV 125
Query: 644 IAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVCDFGL-AKFLSDHQLDT 699
I V S YLH H +VH DLKP N+LL+ D + + DFGL A F ++
Sbjct: 126 IMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKE 182
Query: 700 AVKTPSSSIGLKGTVGYVAPE 720
+ GT Y+APE
Sbjct: 183 RL----------GTAYYIAPE 193
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 111/238 (46%), Gaps = 44/238 (18%)
Query: 533 FSSSNMIGQGSFG-YVYKGTLGEDEMIVAVKVINLK-YKGASRSFVAECEALR-NIRHRN 589
F +++G G+ G VY+G D VAVK I + + A R E + LR + H N
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMF--DNRDVAVKRILPECFSFADR----EVQLLRESDEHPN 79
Query: 590 LIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSD-DQVEVCKLSLIQRVNIAIDV 648
+I+ C+ D F+ E + +L++++ Q D + + ++L+Q+
Sbjct: 80 VIRYF--CTEKD---RQFQYIAIE-LCAATLQEYVEQKDFAHLGLEPITLLQQTT----- 128
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLD----HDMV-AHVCDFGLAKFLSDHQLDTAVKT 703
S + +LH +VH DLKP N+L+ H + A + DFGL K +L +
Sbjct: 129 -SGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK-----KLAVGRHS 179
Query: 704 PSSSIGLKGTVGYVAPEYGMGSE-----ASMTGDIFTGRRPIDAVFNEGHSLHEFAKT 756
S G+ GT G++APE M SE + T DIF+ V +EG H F K+
Sbjct: 180 FSRRSGVPGTEGWIAPE--MLSEDCKENPTYTVDIFSAGCVFYYVISEGS--HPFGKS 233
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 27/190 (14%)
Query: 536 SNMIGQGSFGYVYKGTLGE---DEMIVAVKVINLKYKGASRS-FVAECEALRNIRHRNLI 591
+ ++G+G FG VY+G +++ VAVK ++ F++E ++N+ H +++
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
K+I I + E G L +L ++ + ++V L L ++ + A
Sbjct: 89 KLIGIIEEEP------TWIIMELYPYGELGHYLERNKNSLKVLTLVLY-----SLQICKA 137
Query: 652 MEYLHH-HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
M YL +C VH D+ N+L+ + DFGL++++ D A T
Sbjct: 138 MAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVT------- 186
Query: 711 KGTVGYVAPE 720
+ + +++PE
Sbjct: 187 RLPIKWMSPE 196
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 27/234 (11%)
Query: 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGAS--RSFVAECEALRNIRHR 588
G + IG+G+F V VAVK+I+ +S + E + + H
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHP 73
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWL--HQSDDQVEVCKLSLIQRVNIAI 646
N++K+ + + + T + V EY G + D+L H + E + Q
Sbjct: 74 NIVKLFEVIET---EKTLY--LVXEYASGGEVFDYLVAHGRXKEKE-ARAKFRQ------ 121
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA-KFLSDHQLDTAVKTPS 705
+ SA++Y H Q +VH DLK N+LLD D + DFG + +F ++LD P
Sbjct: 122 -IVSAVQYCH---QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPP 177
Query: 706 -SSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTAL 758
++ L Y PE + S + + +G P D G +L E + L
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD-----GQNLKELRERVL 226
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 93/217 (42%), Gaps = 35/217 (16%)
Query: 514 MEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
M ++ P EL+K E + + + +G G++G V + VAVK ++ ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 570 G---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 61 SIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 626 --QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 120 QKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
DFGLA+ D G T Y APE
Sbjct: 167 LDFGLARHTDDEM-----------AGFVATRWYRAPE 192
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 94/219 (42%), Gaps = 35/219 (15%)
Query: 512 SPMEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK 567
S M ++ P EL+K E + + + +G G++G V + VAVK ++
Sbjct: 19 SHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRP 78
Query: 568 YKG---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWL 624
++ A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 79 FQSIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 137
Query: 625 H---QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVA 681
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D
Sbjct: 138 KCQKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCEL 184
Query: 682 HVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
+ DFGLA+ D G T Y APE
Sbjct: 185 KILDFGLARHTDDEM-----------XGXVATRWYRAPE 212
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 514 MEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
M ++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 570 G---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 61 SIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 626 --QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 120 QKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
D+GLA+ D G T Y APE
Sbjct: 167 LDYGLARHTDDEM-----------TGYVATRWYRAPE 192
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 94/215 (43%), Gaps = 35/215 (16%)
Query: 516 KQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG- 570
++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 10 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 69
Query: 571 --ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH--- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 70 IHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 128
Query: 626 QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D + D
Sbjct: 129 LTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILD 175
Query: 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
FGLA+ +D G T Y APE
Sbjct: 176 FGLARHTADEM-----------TGYVATRWYRAPE 199
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 20/163 (12%)
Query: 539 IGQGSFGYVYKGTLG-----EDEMIVAVKVI-NLKYKGASRSFVAECEALRNIRHRNLIK 592
+G G+FG VY+G + + VAVK + + + F+ E + + H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 593 IITICSSTDFKGTDFKAFV-FEYMENGSLKDWLHQSDDQV-EVCKLSLIQRVNIAIDVAS 650
I + + F+ E M G LK +L ++ + + L+++ +++A D+A
Sbjct: 113 CIGVSLQS------LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 166
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVCDFGLAK 690
+YL + +H D+ N LL VA + DFG+A+
Sbjct: 167 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 94/215 (43%), Gaps = 35/215 (16%)
Query: 516 KQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG- 570
++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 10 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 69
Query: 571 --ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH--- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 70 IHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 128
Query: 626 QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D + D
Sbjct: 129 LTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILD 175
Query: 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
FGLA+ +D G T Y APE
Sbjct: 176 FGLARHTADEM-----------TGYVATRWYRAPE 199
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 93/217 (42%), Gaps = 35/217 (16%)
Query: 514 MEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
M ++ P EL+K E + + + +G G++G V + VAVK ++ ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 570 G---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 61 SIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 626 --QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 120 QKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
DFGLA+ D G T Y APE
Sbjct: 167 LDFGLARHTDDEM-----------AGFVATRWYRAPE 192
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 25/186 (13%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+G+G++G V K I+AVK I R+ V E R + ++ C
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRI--------RATVNSQEQKRLLMDLDISMRTVDCP 66
Query: 599 ST-DFKGTDFK---AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
T F G F+ ++ + + SL + Q D+ + ++ + IA+ + A+E+
Sbjct: 67 FTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGK--IAVSIVKALEH 124
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
LH ++H D+KPSNVL++ +CDFG++ +L D D A + G
Sbjct: 125 LHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVD---DVAKDIDA------GCK 173
Query: 715 GYVAPE 720
Y+APE
Sbjct: 174 PYMAPE 179
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 94/215 (43%), Gaps = 35/215 (16%)
Query: 516 KQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG- 570
++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 10 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 69
Query: 571 --ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH--- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 70 IHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 128
Query: 626 QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D + D
Sbjct: 129 LTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILD 175
Query: 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
FGLA+ +D G T Y APE
Sbjct: 176 FGLARHTADEM-----------TGYVATRWYRAPE 199
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 93/215 (43%), Gaps = 35/215 (16%)
Query: 516 KQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG- 570
++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 8 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 67
Query: 571 --ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH--- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 68 IHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 126
Query: 626 QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D + D
Sbjct: 127 LTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDXELKILD 173
Query: 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
FGLA+ D G T Y APE
Sbjct: 174 FGLARHTDDEM-----------TGYVATRWYRAPE 197
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 20/163 (12%)
Query: 539 IGQGSFGYVYKGTLG-----EDEMIVAVKVI-NLKYKGASRSFVAECEALRNIRHRNLIK 592
+G G+FG VY+G + + VAVK + + + F+ E + H+N+++
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 593 IITICSSTDFKGTDFKAFV-FEYMENGSLKDWLHQSDDQV-EVCKLSLIQRVNIAIDVAS 650
I + + F+ E M G LK +L ++ + + L+++ +++A D+A
Sbjct: 139 CIGVSLQS------LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 192
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVCDFGLAK 690
+YL + +H D+ N LL VA + DFG+A+
Sbjct: 193 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 232
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 93/217 (42%), Gaps = 35/217 (16%)
Query: 514 MEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
M ++ P EL+K E + + + +G G++G V + VAVK ++ ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 570 G---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 61 SIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 626 --QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 120 QKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
DFGLA+ D G T Y APE
Sbjct: 167 LDFGLARHTDDEM-----------TGYVATRWYRAPE 192
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 20/163 (12%)
Query: 539 IGQGSFGYVYKGTLG-----EDEMIVAVKVI-NLKYKGASRSFVAECEALRNIRHRNLIK 592
+G G+FG VY+G + + VAVK + + + F+ E + H+N+++
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 593 IITICSSTDFKGTDFKAFV-FEYMENGSLKDWLHQSDDQV-EVCKLSLIQRVNIAIDVAS 650
I + + F+ E M G LK +L ++ + + L+++ +++A D+A
Sbjct: 116 CIGVSLQS------LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 169
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVCDFGLAK 690
+YL + +H D+ N LL VA + DFG+A+
Sbjct: 170 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 209
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 101/221 (45%), Gaps = 42/221 (19%)
Query: 538 MIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITIC 597
++G+G++G VY G +++ +A+K I + S+ E ++++H+N+++ +
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 598 SSTDFKGTDFKAFVFEYMENGSL-----KDWLHQSDDQVEVCKLSLIQRVNIAIDVASAM 652
S F K F+ E + GSL W D++ + + + +
Sbjct: 89 SENGF----IKIFM-EQVPGGSLSALLRSKWGPLKDNEQTIGFYTK--------QILEGL 135
Query: 653 EYLHHHCQPPMVHGDLKPSNVLLD-HDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
+YLH + +VH D+K NVL++ + V + DFG +K L+ ++ +T
Sbjct: 136 KYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTET------FT 184
Query: 712 GTVGYVAPE--------YGMGSEASMTG----DIFTGRRPI 740
GT+ Y+APE YG ++ G ++ TG+ P
Sbjct: 185 GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 20/163 (12%)
Query: 539 IGQGSFGYVYKGTLG-----EDEMIVAVKVI-NLKYKGASRSFVAECEALRNIRHRNLIK 592
+G G+FG VY+G + + VAVK + + + F+ E + H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 593 IITICSSTDFKGTDFKAFV-FEYMENGSLKDWLHQSDDQV-EVCKLSLIQRVNIAIDVAS 650
I + + F+ E M G LK +L ++ + + L+++ +++A D+A
Sbjct: 99 CIGVSLQS------LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 152
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVCDFGLAK 690
+YL + +H D+ N LL VA + DFG+A+
Sbjct: 153 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 46.6 bits (109), Expect = 6e-05, Method: Composition-based stats.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 30/200 (15%)
Query: 527 SKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVA---ECEALR 583
+K + + +G+G+F V + + A K+IN K K ++R F E R
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK-KLSARDFQKLEREARICR 60
Query: 584 NIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVN 643
++H N++++ + F VF+ + G L + + + E IQ++
Sbjct: 61 KLQHPNIVRL-----HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI- 114
Query: 644 IAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM---VAHVCDFGLAKFLSDHQLDTA 700
++ Y H + +VH +LKP N+LL + DFGLA ++D +
Sbjct: 115 -----LESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE---- 162
Query: 701 VKTPSSSIGLKGTVGYVAPE 720
+ G GT GY++PE
Sbjct: 163 -----AWHGFAGTPGYLSPE 177
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 79/170 (46%), Gaps = 20/170 (11%)
Query: 536 SNMIGQGSFGYVYKGTLGE---DEMIVAVKVINLKYKGASRS-FVAECEALRNIRHRNLI 591
+ ++G+G FG VY+G +++ VAVK ++ F++E ++N+ H +++
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
K+I I + E G L +L ++ + ++V L L ++ + A
Sbjct: 77 KLIGIIEEEP------TWIIMELYPYGELGHYLERNKNSLKVLTLVLY-----SLQICKA 125
Query: 652 MEYLHH-HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTA 700
M YL +C VH D+ N+L+ + DFGL++++ D A
Sbjct: 126 MAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA 171
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 93/215 (43%), Gaps = 35/215 (16%)
Query: 516 KQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG- 570
++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 26 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 85
Query: 571 --ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH--- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 86 IHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 144
Query: 626 QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D + D
Sbjct: 145 LTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILD 191
Query: 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
FGLA+ D G T Y APE
Sbjct: 192 FGLARHTDDEM-----------XGYVATRWYRAPE 215
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 112/252 (44%), Gaps = 46/252 (18%)
Query: 510 DTSPMEKQFPMVSYAELSKATGEFSSSNM-----IGQGSFGYVYKG-TLGEDEM----IV 559
D P+++ + Y + EF + +G+G+FG V + G D+ V
Sbjct: 41 DELPLDEHCERLPY---DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTV 97
Query: 560 AVKVINLKYKGAS----RSFVAECEALRNI-RHRNLIKIITICSSTDFKGTDFKAFVFEY 614
AVK++ +GA+ R+ ++E + L +I H N++ ++ C+ G V E+
Sbjct: 98 AVKMLK---EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV-EF 150
Query: 615 MENGSLKDWLHQSDDQVEVCK----------LSLIQRVNIAIDVASAMEYL-HHHCQPPM 663
+ G+L +L ++ K L+L + + VA ME+L C
Sbjct: 151 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC---- 206
Query: 664 VHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGM 723
+H DL N+LL V +CDFGLA+ + ++ V+ + + LK ++APE
Sbjct: 207 IHRDLAARNILLSEKNVVKICDFGLARDI--YKDPDYVRKGDARLPLK----WMAPETIF 260
Query: 724 GSEASMTGDIFT 735
++ D+++
Sbjct: 261 DRVYTIQSDVWS 272
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 20/163 (12%)
Query: 539 IGQGSFGYVYKGTLG-----EDEMIVAVKVI-NLKYKGASRSFVAECEALRNIRHRNLIK 592
+G G+FG VY+G + + VAVK + + + F+ E + H+N+++
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 593 IITICSSTDFKGTDFKAFV-FEYMENGSLKDWLHQSDDQV-EVCKLSLIQRVNIAIDVAS 650
I + + F+ E M G LK +L ++ + + L+++ +++A D+A
Sbjct: 90 CIGVSLQS------LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 143
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVCDFGLAK 690
+YL + +H D+ N LL VA + DFG+A+
Sbjct: 144 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 183
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 20/163 (12%)
Query: 539 IGQGSFGYVYKGTLG-----EDEMIVAVKVI-NLKYKGASRSFVAECEALRNIRHRNLIK 592
+G G+FG VY+G + + VAVK + + + F+ E + H+N+++
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 593 IITICSSTDFKGTDFKAFV-FEYMENGSLKDWLHQSDDQV-EVCKLSLIQRVNIAIDVAS 650
I + + F+ E M G LK +L ++ + + L+++ +++A D+A
Sbjct: 105 CIGVSLQS------LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 158
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVCDFGLAK 690
+YL + +H D+ N LL VA + DFG+A+
Sbjct: 159 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 198
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 21/168 (12%)
Query: 532 EFSSSNMIGQGSFGYVYKGTL---GEDEMI-VAVKVI--NLKYKGASRSFVAECEALRNI 585
E ++G G+FG VYKG GE+ I VA+KV+ N K A++ + E + +
Sbjct: 18 ELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPK-ANKEILDEAYVMAGV 76
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIA 645
+ +++ IC ++ + V + M G L D H +++ + L+ N
Sbjct: 77 GSPYVSRLLGICLTSTVQ------LVTQLMPYGCLLD--HVRENRGRLGSQDLL---NWC 125
Query: 646 IDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLS 693
+ +A M YL +VH DL NVL+ + DFGLA+ L
Sbjct: 126 MQIAKGMSYLEDV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLD 170
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 20/163 (12%)
Query: 539 IGQGSFGYVYKGTLG-----EDEMIVAVKVI-NLKYKGASRSFVAECEALRNIRHRNLIK 592
+G G+FG VY+G + + VAVK + + + F+ E + H+N+++
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 593 IITICSSTDFKGTDFKAFV-FEYMENGSLKDWLHQSDDQV-EVCKLSLIQRVNIAIDVAS 650
I + + F+ E M G LK +L ++ + + L+++ +++A D+A
Sbjct: 115 CIGVSLQS------LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 168
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVCDFGLAK 690
+YL + +H D+ N LL VA + DFG+A+
Sbjct: 169 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 208
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 93/215 (43%), Gaps = 35/215 (16%)
Query: 516 KQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG- 570
++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 3 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 571 --ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH--- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 63 IHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 626 QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D + D
Sbjct: 122 LTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILD 168
Query: 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
FGLA+ D G T Y APE
Sbjct: 169 FGLARHTDDEM-----------TGYVATRWYRAPE 192
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 86/177 (48%), Gaps = 23/177 (12%)
Query: 560 AVKVINLKYKGASRSFV-AECEALRNIR-HRNLIKIITICSSTDFKGTDFKAFVFEYMEN 617
AVK+I K G RS V E E L + HRN+++ F+ D VFE M
Sbjct: 42 AVKIIE-KQPGHIRSRVFREVEMLYQCQGHRNVLE-----LIEFFEEEDRFYLVFEKMRG 95
Query: 618 GSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDH 677
GS+ +H+ E+ ++Q DVASA+++LH+ + H DLKP N+L +H
Sbjct: 96 GSILSHIHKRRHFNELEASVVVQ------DVASALDFLHNK---GIAHRDLKPENILCEH 146
Query: 678 -DMVA--HVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEY--GMGSEASM 729
+ V+ +CDF L + + + + TP + G+ Y+APE EAS+
Sbjct: 147 PNQVSPVKICDFDLGSGIKLNGDCSPISTP-ELLTPCGSAEYMAPEVVEAFSEEASI 202
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 20/163 (12%)
Query: 539 IGQGSFGYVYKGTLG-----EDEMIVAVKVI-NLKYKGASRSFVAECEALRNIRHRNLIK 592
+G G+FG VY+G + + VAVK + + + F+ E + H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 593 IITICSSTDFKGTDFKAFVF-EYMENGSLKDWLHQSDDQV-EVCKLSLIQRVNIAIDVAS 650
I + + F+ E M G LK +L ++ + + L+++ +++A D+A
Sbjct: 113 CIGVSLQS------LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 166
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVCDFGLAK 690
+YL + +H D+ N LL VA + DFG+A+
Sbjct: 167 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 91/212 (42%), Gaps = 35/212 (16%)
Query: 519 PMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG---A 571
P EL+K E + + + +G G++G V + + VAVK ++ ++ A
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 61
Query: 572 SRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH---QSD 628
R++ E L++++H N+I ++ + + ++ ++ L + + +D
Sbjct: 62 KRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 120
Query: 629 DQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688
D V+ +++ ++Y+H ++H DLKPSN+ ++ D + DFGL
Sbjct: 121 DHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGL 167
Query: 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
A+ D G T Y APE
Sbjct: 168 ARHTDDEM-----------TGYVATRWYRAPE 188
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 23/197 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
IG+GS G V VAVK+++L+ + E +R+ +H N++++
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMY---- 108
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
+ G + + E+++ G+L D + Q +L+ Q + V A+ YLH
Sbjct: 109 KSYLVGEELWVLM-EFLQGGALTDIVSQ-------VRLNEEQIATVCEAVLQALAYLHAQ 160
Query: 659 CQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVA 718
++H D+K ++LL D + DFG +S K L GT ++A
Sbjct: 161 G---VIHRDIKSDSILLTLDGRVKLSDFGFCAQIS--------KDVPKRKXLVGTPYWMA 209
Query: 719 PEYGMGSEASMTGDIFT 735
PE S + DI++
Sbjct: 210 PEVISRSLYATEVDIWS 226
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 93/215 (43%), Gaps = 35/215 (16%)
Query: 516 KQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG- 570
++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 8 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 67
Query: 571 --ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH--- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 68 IHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 126
Query: 626 QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D + D
Sbjct: 127 LTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILD 173
Query: 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
FGLA+ D G T Y APE
Sbjct: 174 FGLARHTDDEM-----------TGYVATRWYRAPE 197
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 93/215 (43%), Gaps = 35/215 (16%)
Query: 516 KQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG- 570
++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 2 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 61
Query: 571 --ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH--- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 62 IHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 120
Query: 626 QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D + D
Sbjct: 121 LTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILD 167
Query: 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
FGLA+ D G T Y APE
Sbjct: 168 FGLARHTDDEM-----------TGYVATRWYRAPE 191
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 91/212 (42%), Gaps = 35/212 (16%)
Query: 519 PMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG---A 571
P EL+K E + + + +G G++G V + + VAVK ++ ++ A
Sbjct: 4 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 63
Query: 572 SRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH---QSD 628
R++ E L++++H N+I ++ + + ++ ++ L + + +D
Sbjct: 64 KRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 122
Query: 629 DQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688
D V+ +++ ++Y+H ++H DLKPSN+ ++ D + DFGL
Sbjct: 123 DHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGL 169
Query: 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
A+ D G T Y APE
Sbjct: 170 ARHTDDEM-----------TGYVATRWYRAPE 190
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 90/189 (47%), Gaps = 30/189 (15%)
Query: 538 MIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITIC 597
++G+G++G VY G +++ +A+K I + S+ E ++++H+N+++ +
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 598 SSTDFKGTDFKAFVFEYMENGSL-----KDWLHQSDDQVEVCKLSLIQRVNIAIDVASAM 652
S F K F+ E + GSL W D++ + + + +
Sbjct: 75 SENGF----IKIFM-EQVPGGSLSALLRSKWGPLKDNEQTIGFYTK--------QILEGL 121
Query: 653 EYLHHHCQPPMVHGDLKPSNVLLD-HDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
+YLH + +VH D+K NVL++ + V + DFG +K L+ ++ +T
Sbjct: 122 KYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTET------FT 170
Query: 712 GTVGYVAPE 720
GT+ Y+APE
Sbjct: 171 GTLQYMAPE 179
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 93/215 (43%), Gaps = 35/215 (16%)
Query: 516 KQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG- 570
++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 5 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 64
Query: 571 --ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH--- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 65 IHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 123
Query: 626 QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D + D
Sbjct: 124 LTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILD 170
Query: 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
FGLA+ D G T Y APE
Sbjct: 171 FGLARHTDDEM-----------TGYVATRWYRAPE 194
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 112/252 (44%), Gaps = 46/252 (18%)
Query: 510 DTSPMEKQFPMVSYAELSKATGEFSSSNM-----IGQGSFGYVYKG-TLGEDEM----IV 559
D P+++ + Y + EF + +G+G+FG V + G D+ V
Sbjct: 4 DELPLDEHCERLPY---DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTV 60
Query: 560 AVKVINLKYKGAS----RSFVAECEALRNI-RHRNLIKIITICSSTDFKGTDFKAFVFEY 614
AVK++ +GA+ R+ ++E + L +I H N++ ++ C+ G V E+
Sbjct: 61 AVKMLK---EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV-EF 113
Query: 615 MENGSLKDWLHQSDDQVEVCK----------LSLIQRVNIAIDVASAMEYL-HHHCQPPM 663
+ G+L +L ++ K L+L + + VA ME+L C
Sbjct: 114 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC---- 169
Query: 664 VHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGM 723
+H DL N+LL V +CDFGLA+ + ++ V+ + + LK ++APE
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDI--YKDPDXVRKGDARLPLK----WMAPETIF 223
Query: 724 GSEASMTGDIFT 735
++ D+++
Sbjct: 224 DRVYTIQSDVWS 235
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 91/212 (42%), Gaps = 35/212 (16%)
Query: 519 PMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG---A 571
P EL+K E + + + +G G++G V + + VAVK ++ ++ A
Sbjct: 3 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 62
Query: 572 SRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH---QSD 628
R++ E L++++H N+I ++ + + ++ ++ L + + +D
Sbjct: 63 KRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 121
Query: 629 DQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688
D V+ +++ ++Y+H ++H DLKPSN+ ++ D + DFGL
Sbjct: 122 DHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGL 168
Query: 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
A+ D G T Y APE
Sbjct: 169 ARHTDDEM-----------TGYVATRWYRAPE 189
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 33/210 (15%)
Query: 539 IGQGSFGYVYKGTLG-----EDEMIVAVKVI-NLKYKGASRSFVAECEALRNIRHRNLIK 592
+G G+FG VY+G + + VAVK + + + F+ E + H+N+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 593 IITICSSTDFKGTDFKAFV-FEYMENGSLKDWLHQSDDQV-EVCKLSLIQRVNIAIDVAS 650
I + + F+ E M G LK +L ++ + + L+++ +++A D+A
Sbjct: 98 CIGVSLQS------LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 151
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
+YL + +H D+ N LL VA + DFG+A+ + +S
Sbjct: 152 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY-----------RAS 197
Query: 708 IGLKGTVGYVAPEYGMGSEASMTGDIFTGR 737
KG + P M EA M G IFT +
Sbjct: 198 YYRKGGCAML-PVKWMPPEAFMEG-IFTSK 225
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 93/215 (43%), Gaps = 35/215 (16%)
Query: 516 KQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG- 570
++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 10 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 69
Query: 571 --ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH--- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 70 IHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 128
Query: 626 QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D + D
Sbjct: 129 LTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILD 175
Query: 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
FGLA+ D G T Y APE
Sbjct: 176 FGLARHTDDEM-----------TGYVATRWYRAPE 199
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 20/163 (12%)
Query: 539 IGQGSFGYVYKGTLG-----EDEMIVAVKVI-NLKYKGASRSFVAECEALRNIRHRNLIK 592
+G G+FG VY+G + + VAVK + + + F+ E + H+N+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 593 IITICSSTDFKGTDFKAFVF-EYMENGSLKDWLHQSDDQV-EVCKLSLIQRVNIAIDVAS 650
I + + F+ E M G LK +L ++ + + L+++ +++A D+A
Sbjct: 98 CIGVSLQS------LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 151
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVCDFGLAK 690
+YL + +H D+ N LL VA + DFG+A+
Sbjct: 152 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 82/198 (41%), Gaps = 37/198 (18%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGA------SRSFVAECEALRNIR 586
+ +G G++G V L +D++ A + I + K + S + + E L+ +
Sbjct: 6 YQRVKKLGSGAYGEV---LLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
H N++K+ F+ V E G L D+ + K S + I
Sbjct: 63 HPNIMKLYEF-----FEDKRNYYLVMEVYRGGEL------FDEIILRQKFSEVDAAVIMK 111
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVCDFGL-AKFLSDHQLDTAVK 702
V S YLH H +VH DLKP N+LL+ D + + DFGL A F ++ +
Sbjct: 112 QVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL- 167
Query: 703 TPSSSIGLKGTVGYVAPE 720
GT Y+APE
Sbjct: 168 ---------GTAYYIAPE 176
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 33/210 (15%)
Query: 539 IGQGSFGYVYKGTLG-----EDEMIVAVKVI-NLKYKGASRSFVAECEALRNIRHRNLIK 592
+G G+FG VY+G + + VAVK + + + F+ E + H+N+++
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 593 IITICSSTDFKGTDFKAFV-FEYMENGSLKDWLHQSDDQV-EVCKLSLIQRVNIAIDVAS 650
I + + F+ E M G LK +L ++ + + L+++ +++A D+A
Sbjct: 125 CIGVSLQS------LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 178
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
+YL + +H D+ N LL VA + DFG+A+ + +S
Sbjct: 179 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY-----------RAS 224
Query: 708 IGLKGTVGYVAPEYGMGSEASMTGDIFTGR 737
KG + P M EA M G IFT +
Sbjct: 225 YYRKGGCAML-PVKWMPPEAFMEG-IFTSK 252
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 91/212 (42%), Gaps = 35/212 (16%)
Query: 519 PMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG---A 571
P EL+K E + + + +G G++G V + + VAVK ++ ++ A
Sbjct: 3 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 62
Query: 572 SRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH---QSD 628
R++ E L++++H N+I ++ + + ++ ++ L + + +D
Sbjct: 63 KRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 121
Query: 629 DQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688
D V+ +++ ++Y+H ++H DLKPSN+ ++ D + DFGL
Sbjct: 122 DHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGL 168
Query: 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
A+ D G T Y APE
Sbjct: 169 ARHTDDEM-----------TGYVATRWYRAPE 189
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 89/207 (42%), Gaps = 30/207 (14%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFV-AECEALRNIRHRNLI 591
F + +G+G+ VY+ + A+KV+ K + V E L + H N+I
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLK---KTVDKKIVRTEIGVLLRLSHPNII 111
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
K+ I F+ + V E + G L D + VE S + + A
Sbjct: 112 KLKEI-----FETPTEISLVLELVTGGELFDRI------VEKGYYSERDAADAVKQILEA 160
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDH---DMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
+ YLH + +VH DLKP N+L D + DFGL+K + +HQ+ +KT
Sbjct: 161 VAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV-EHQV--LMKT----- 209
Query: 709 GLKGTVGYVAPEYGMGSEASMTGDIFT 735
+ GT GY APE G D+++
Sbjct: 210 -VCGTPGYCAPEILRGCAYGPEVDMWS 235
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 20/163 (12%)
Query: 539 IGQGSFGYVYKGTLG-----EDEMIVAVKVI-NLKYKGASRSFVAECEALRNIRHRNLIK 592
+G G+FG VY+G + + VAVK + + + F+ E + H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 593 IITICSSTDFKGTDFKAFV-FEYMENGSLKDWLHQSDDQV-EVCKLSLIQRVNIAIDVAS 650
I + + F+ E M G LK +L ++ + + L+++ +++A D+A
Sbjct: 99 CIGVSLQS------LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 152
Query: 651 AMEYLHHHCQPPMVHGDLKPSNVLLD---HDMVAHVCDFGLAK 690
+YL + +H D+ N LL VA + DFG+A+
Sbjct: 153 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ 192
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 80/186 (43%), Gaps = 23/186 (12%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+G G+FG VYK E + A KVI K + ++ E E L H ++K++
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 599 STDFKGTDFKAFVF-EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
D K ++ E+ G++ + + D + ++ ++ R + A+ +LH
Sbjct: 79 H------DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCR-----QMLEALNFLHS 127
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
++H DLK NVL+ + + DFG++ +KT GT ++
Sbjct: 128 KR---IIHRDLKAGNVLMTLEGDIRLADFGVSA--------KNLKTLQKRDSFIGTPYWM 176
Query: 718 APEYGM 723
APE M
Sbjct: 177 APEVVM 182
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 109/250 (43%), Gaps = 43/250 (17%)
Query: 510 DTSPMEKQFPMVSYAELSKATGEFSSSNM-----IGQGSFGYVYKG-TLGEDEM----IV 559
D P+++ + Y + EF + +G+G+FG V + G D+ V
Sbjct: 5 DELPLDEHCERLPY---DASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTV 61
Query: 560 AVKVINLKYKGAS----RSFVAECEALRNI-RHRNLIKIITICSSTDFKGTDFKAFVFEY 614
AVK++ +GA+ R+ ++E + L +I H N++ ++ C+ G V E+
Sbjct: 62 AVKMLK---EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV-EF 114
Query: 615 MENGSLKDWLHQSDDQVEVCK---------LSLIQRVNIAIDVASAMEYLHHHCQPPMVH 665
+ G+L +L ++ K L+L + + VA ME+L +H
Sbjct: 115 CKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIH 171
Query: 666 GDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS 725
DL N+LL V +CDFGLA+ + V+ + + LK ++APE
Sbjct: 172 RDLAARNILLSEKNVVKICDFGLARDIXKDP--DXVRKGDARLPLK----WMAPETIFDR 225
Query: 726 EASMTGDIFT 735
++ D+++
Sbjct: 226 VYTIQSDVWS 235
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 89/209 (42%), Gaps = 29/209 (13%)
Query: 519 PMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG---A 571
P EL+K E + + + +G G++G V + VAVK ++ ++ A
Sbjct: 2 PTFYRQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 61
Query: 572 SRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQV 631
R++ E L++++H N+I ++ + + ++ ++ L ++ V
Sbjct: 62 KRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-------NNIV 113
Query: 632 EVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKF 691
+ KL+ + + ++Y+H ++H DLKPSN+ ++ D + DFGLA+
Sbjct: 114 KCAKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH 170
Query: 692 LSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
D G T Y APE
Sbjct: 171 TDDEM-----------TGYVATRWYRAPE 188
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 112/252 (44%), Gaps = 46/252 (18%)
Query: 510 DTSPMEKQFPMVSYAELSKATGEFSSSNM-----IGQGSFGYVYKG-TLGEDEM----IV 559
D P+++ + Y + EF + +G+G+FG V + G D+ V
Sbjct: 4 DELPLDEHCERLPY---DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTV 60
Query: 560 AVKVINLKYKGAS----RSFVAECEALRNI-RHRNLIKIITICSSTDFKGTDFKAFVFEY 614
AVK++ +GA+ R+ ++E + L +I H N++ ++ C+ G V E+
Sbjct: 61 AVKMLK---EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV-EF 113
Query: 615 MENGSLKDWLHQSDDQVEVCK----------LSLIQRVNIAIDVASAMEYL-HHHCQPPM 663
+ G+L +L ++ K L+L + + VA ME+L C
Sbjct: 114 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC---- 169
Query: 664 VHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGM 723
+H DL N+LL V +CDFGLA+ + ++ V+ + + LK ++APE
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDI--YKDPDYVRKGDARLPLK----WMAPETIF 223
Query: 724 GSEASMTGDIFT 735
++ D+++
Sbjct: 224 DRVYTIQSDVWS 235
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 92/212 (43%), Gaps = 29/212 (13%)
Query: 516 KQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG- 570
++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 9 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 68
Query: 571 --ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSD 628
A R++ E L++++H N+I ++ + + ++ ++ L +
Sbjct: 69 IHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-------N 120
Query: 629 DQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688
+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D + DFGL
Sbjct: 121 NIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGL 177
Query: 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
A+ D G T Y APE
Sbjct: 178 ARHTDD-----------EMTGYVATRWYRAPE 198
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 129/326 (39%), Gaps = 61/326 (18%)
Query: 527 SKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVA---ECEALR 583
+K + + +G+G+F V + + A K+IN K K ++R F E R
Sbjct: 25 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK-KLSARDFQKLEREARICR 83
Query: 584 NIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVN 643
++H N++++ + F VF+ + G L + + + E IQ++
Sbjct: 84 KLQHPNIVRL-----HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI- 137
Query: 644 IAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM---VAHVCDFGLAKFLSDHQLDTA 700
++ Y H + +VH +LKP N+LL + DFGLA ++D +
Sbjct: 138 -----LESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE---- 185
Query: 701 VKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT----------GRRPIDAVFNEG-HS 749
+ G GT GY++PE S DI+ G P ++E H
Sbjct: 186 -----AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF---WDEDQHR 237
Query: 750 LHEFAKTA---LPEKVMEIVDP---SLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLC 803
L+ K P + V P SL+ ++T N KR+ ++ L + +C
Sbjct: 238 LYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNP----KKRITADQAL----KVPWIC 289
Query: 804 SME---SPFERMDMRDVVAKLCHTRE 826
+ E S R D D + K R+
Sbjct: 290 NRERVASAIHRQDTVDCLKKFNARRK 315
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 19/158 (12%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSF----VAECEALRNIRHRNLIKII 594
+G G+FG V KG +++ V V LK + + +AE ++ + + ++++I
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
IC + + V E E G L +L Q+ + + L+ +V++ M+Y
Sbjct: 75 GICEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG------MKY 122
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL 692
L + VH DL NVLL A + DFGL+K L
Sbjct: 123 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 157
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 24/186 (12%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSF----VAECEALRNIRHRNLIKII 594
+G G+FG V KG +++ V V LK + + +AE ++ + + ++++I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
IC + + V E E G L +L Q+ + + L+ +V++ M+Y
Sbjct: 79 GICEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG------MKY 126
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L + VH DL NVLL A + DFGL+K L + +T K V
Sbjct: 127 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHG-----KWPV 178
Query: 715 GYVAPE 720
+ APE
Sbjct: 179 KWYAPE 184
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 19/158 (12%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSF----VAECEALRNIRHRNLIKII 594
+G G+FG V KG +++ V V LK + + +AE ++ + + ++++I
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
IC + + V E E G L +L Q+ + + L+ +V++ M+Y
Sbjct: 73 GICEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG------MKY 120
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL 692
L + VH DL NVLL A + DFGL+K L
Sbjct: 121 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 155
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 19/158 (12%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSF----VAECEALRNIRHRNLIKII 594
+G G+FG V KG +++ V V LK + + +AE ++ + + ++++I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
IC + + V E E G L +L Q+ + + L+ +V++ M+Y
Sbjct: 79 GICEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG------MKY 126
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL 692
L + VH DL NVLL A + DFGL+K L
Sbjct: 127 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 161
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 62/139 (44%), Gaps = 21/139 (15%)
Query: 628 DDQVEVCK--LSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDH-----DMV 680
+D ++C SL + IAI + S MEY+H +++ D+KP N L+ V
Sbjct: 92 EDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQV 148
Query: 681 AHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPI 740
H+ DFGLAK D + + L GT Y++ +G E S D +
Sbjct: 149 IHIIDFGLAKEYIDPETKKHIPYREHK-SLTGTARYMSINTHLGKEQSRRDD-------L 200
Query: 741 DAVFNEGHSLHEFAKTALP 759
+A+ GH F + +LP
Sbjct: 201 EAL---GHMFMYFLRGSLP 216
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 80/186 (43%), Gaps = 23/186 (12%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+G G+FG VYK E + A KVI K + ++ E E L H ++K++
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 599 STDFKGTDFKAFVF-EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
D K ++ E+ G++ + + D + ++ ++ R + A+ +LH
Sbjct: 87 H------DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCR-----QMLEALNFLHS 135
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
++H DLK NVL+ + + DFG++ +KT GT ++
Sbjct: 136 KR---IIHRDLKAGNVLMTLEGDIRLADFGVSA--------KNLKTLQKRDSFIGTPYWM 184
Query: 718 APEYGM 723
APE M
Sbjct: 185 APEVVM 190
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 89/209 (42%), Gaps = 41/209 (19%)
Query: 525 ELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG---ASRSFVA 577
E++K E + +G G++G V G VA+K + ++ A R++
Sbjct: 15 EVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAY-R 73
Query: 578 ECEALRNIRHRNLIKIITICSST----DFKGTDFKAFVFEYM--ENGSLKDWLHQSDDQV 631
E L+++RH N+I ++ + + DF TDF V +M + G L +D++
Sbjct: 74 ELRLLKHMRHENVIGLLDVFTPDETLDDF--TDF-YLVMPFMGTDLGKLMKHEKLGEDRI 130
Query: 632 EVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKF 691
+ +++ + Y+H ++H DLKP N+ ++ D + DFGLA+
Sbjct: 131 QFLVYQMLK----------GLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR- 176
Query: 692 LSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
+ S G T Y APE
Sbjct: 177 ----------QADSEMXGXVVTRWYRAPE 195
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 110/252 (43%), Gaps = 46/252 (18%)
Query: 510 DTSPMEKQFPMVSYAELSKATGEFSSSNM-----IGQGSFGYVYKG-TLGEDEM----IV 559
D P+++ + Y + EF + +G+G+FG V + G D+ V
Sbjct: 4 DELPLDEHCERLPY---DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTV 60
Query: 560 AVKVINLKYKGAS----RSFVAECEALRNI-RHRNLIKIITICSSTDFKGTDFKAFVFEY 614
AVK++ +GA+ R+ ++E + L +I H N++ ++ C+ G V E+
Sbjct: 61 AVKMLK---EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV-EF 113
Query: 615 MENGSLKDWLHQSDDQVEVCK----------LSLIQRVNIAIDVASAMEYL-HHHCQPPM 663
+ G+L +L ++ K L+L + + VA ME+L C
Sbjct: 114 CKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC---- 169
Query: 664 VHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGM 723
+H DL N+LL V +CDFGLA+ + V+ + + LK ++APE
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIXKDP--DXVRKGDARLPLK----WMAPETIF 223
Query: 724 GSEASMTGDIFT 735
++ D+++
Sbjct: 224 DRVYTIQSDVWS 235
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 112/252 (44%), Gaps = 46/252 (18%)
Query: 510 DTSPMEKQFPMVSYAELSKATGEFSSSNM-----IGQGSFGYVYKG-TLGEDEM----IV 559
D P+++ + Y + EF + +G+G+FG V + G D+ V
Sbjct: 6 DELPLDEHCERLPY---DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTV 62
Query: 560 AVKVINLKYKGAS----RSFVAECEALRNI-RHRNLIKIITICSSTDFKGTDFKAFVFEY 614
AVK++ +GA+ R+ ++E + L +I H N++ ++ C+ G V E+
Sbjct: 63 AVKMLK---EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV-EF 115
Query: 615 MENGSLKDWLHQSDDQVEVCK----------LSLIQRVNIAIDVASAMEYL-HHHCQPPM 663
+ G+L +L ++ K L+L + + VA ME+L C
Sbjct: 116 CKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC---- 171
Query: 664 VHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGM 723
+H DL N+LL V +CDFGLA+ + ++ V+ + + LK ++APE
Sbjct: 172 IHRDLAARNILLSEKNVVKICDFGLARDI--YKDPDYVRKGDARLPLK----WMAPETIF 225
Query: 724 GSEASMTGDIFT 735
++ D+++
Sbjct: 226 DRVYTIQSDVWS 237
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 36/217 (16%)
Query: 539 IGQGSFGYVYKG-TLGEDEM----IVAVKVINLKYKGAS----RSFVAECEALRNI-RHR 588
+G+G+FG V + G D+ VAVK++ +GA+ R+ ++E + L +I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLK---EGATHSEHRALMSELKILIHIGHHL 82
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCK----------LSL 638
N++ ++ C+ G V E+ + G+L +L ++ K L+L
Sbjct: 83 NVVNLLGACTKP---GGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 639 IQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLD 698
+ + VA ME+L +H DL N+LL V +CDFGLA+ +
Sbjct: 139 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP-- 193
Query: 699 TAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
V+ + + LK ++APE ++ D+++
Sbjct: 194 DXVRKGDARLPLK----WMAPETIFDRVYTIQSDVWS 226
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 92/215 (42%), Gaps = 35/215 (16%)
Query: 516 KQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG- 570
++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 3 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 62
Query: 571 --ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQ-- 626
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 63 IHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQK 121
Query: 627 -SDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D + D
Sbjct: 122 LTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDSELKILD 168
Query: 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
FGL + D G T Y APE
Sbjct: 169 FGLCRHTDDEM-----------TGYVATRWYRAPE 192
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 21/139 (15%)
Query: 628 DDQVEVCK--LSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLL-----DHDMV 680
+D ++C +L + IAI + S MEY+H +++ D+KP N L+ + V
Sbjct: 84 EDLFDLCDRTFTLKTVLMIAIQLLSRMEYVHSKN---LIYRDVKPENFLIGRQGNKKEHV 140
Query: 681 AHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPI 740
H+ DFGLAK D + + L GT Y++ +G E S D +
Sbjct: 141 IHIIDFGLAKEYIDPETKKHIPYREHK-SLTGTARYMSINTHLGKEQSRRDD-------L 192
Query: 741 DAVFNEGHSLHEFAKTALP 759
+A+ GH F + +LP
Sbjct: 193 EAL---GHMFMYFLRGSLP 208
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 81/196 (41%), Gaps = 27/196 (13%)
Query: 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEA--LRNIRH 587
T E+ IG+G+F V + A K+IN K A E EA R ++H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAID 647
N++++ S F VF+ + G L + + + E IQ++ A+
Sbjct: 63 SNIVRLHDSISEEGFH-----YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV- 116
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHD---MVAHVCDFGLAKFLSDHQLDTAVKTP 704
LH H Q +VH DLKP N+LL + DFGLA + Q
Sbjct: 117 -------LHCH-QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ-------- 160
Query: 705 SSSIGLKGTVGYVAPE 720
+ G GT GY++PE
Sbjct: 161 QAWFGFAGTPGYLSPE 176
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 98/226 (43%), Gaps = 32/226 (14%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
IG+G++G V K I+AVK I RS V E E + + +++ + C
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRI--------RSTVDEKEQKQLLMDLDVVMRSSDCP 81
Query: 599 S-TDFKGTDFKA----FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAME 653
F G F+ E M K + + +V ++ ++ +A A+
Sbjct: 82 YIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLA--TVKALN 139
Query: 654 YLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGT 713
+L + + ++H D+KPSN+LLD +CDFG++ L +D+ KT + G
Sbjct: 140 HLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQL----VDSIAKTRDA-----GC 188
Query: 714 VGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALP 759
Y+APE S + D+ + V++ G +L+E A P
Sbjct: 189 RPYMAPERIDPSASRQGYDVRSD------VWSLGITLYELATGRFP 228
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 90/212 (42%), Gaps = 35/212 (16%)
Query: 519 PMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG---A 571
P EL+K E + + + +G G++G V + VAVK ++ ++ A
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 61
Query: 572 SRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH---QSD 628
R++ E L++++H N+I ++ + + ++ ++ L + + +D
Sbjct: 62 KRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 120
Query: 629 DQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688
D V+ +++ ++Y+H ++H DLKPSN+ ++ D + DFGL
Sbjct: 121 DHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGL 167
Query: 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
A+ D G T Y APE
Sbjct: 168 ARHTDDEM-----------AGFVATRWYRAPE 188
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 93/217 (42%), Gaps = 35/217 (16%)
Query: 514 MEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
M ++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 570 G---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 61 SIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 626 --QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 120 QKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
FGLA+ D G T Y APE
Sbjct: 167 LGFGLARHTDDEM-----------TGYVATRWYRAPE 192
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 24/186 (12%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSF----VAECEALRNIRHRNLIKII 594
+G G+FG V KG +++ V V LK + + +AE ++ + + ++++I
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
IC + + V E E G L +L Q+ + + L+ +V++ M+Y
Sbjct: 437 GICEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG------MKY 484
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L + VH DL NVLL A + DFGL+K L + +T K V
Sbjct: 485 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPV 536
Query: 715 GYVAPE 720
+ APE
Sbjct: 537 KWYAPE 542
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 24/186 (12%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSF----VAECEALRNIRHRNLIKII 594
+G G+FG V KG +++ V V LK + + +AE ++ + + ++++I
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
IC + + V E E G L +L Q+ + + L+ +V++ M+Y
Sbjct: 438 GICEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG------MKY 485
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L + VH DL NVLL A + DFGL+K L + +T K V
Sbjct: 486 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPV 537
Query: 715 GYVAPE 720
+ APE
Sbjct: 538 KWYAPE 543
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 39/192 (20%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG---ASRSFVAECEALRNIRHRNLIKIIT 595
+G G++G V VAVK ++ ++ A R++ E L++++H N+I ++
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGLLD 94
Query: 596 I----CSSTDFKGTDFKAFVFEYMENGSLKDWLHQ---SDDQVEVCKLSLIQRVNIAIDV 648
+ S DF + ++ + L + + SD+ V+ L++
Sbjct: 95 VFTPATSIEDFS----EVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLR-------- 142
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
++Y+H ++H DLKPSNV ++ D + DFGLA+ Q D +
Sbjct: 143 --GLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEM------T 186
Query: 709 GLKGTVGYVAPE 720
G T Y APE
Sbjct: 187 GYVATRWYRAPE 198
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 100/217 (46%), Gaps = 36/217 (16%)
Query: 539 IGQGSFGYVYKG-TLGEDEM----IVAVKVINLKYKGAS----RSFVAECEALRNI-RHR 588
+G+G+FG V + G D+ VAVK++ +GA+ R+ ++E + L +I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLK---EGATHSEHRALMSELKILIHIGHHL 82
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCK----------LSL 638
N++ ++ C+ K + E+ + G+L +L ++ K L+L
Sbjct: 83 NVVNLLGACT----KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 639 IQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLD 698
+ + VA ME+L +H DL N+LL V +CDFGLA+ + ++
Sbjct: 139 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI--YKDP 193
Query: 699 TAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
V+ + + LK ++APE ++ D+++
Sbjct: 194 DYVRKGDARLPLK----WMAPETIFDRVYTIQSDVWS 226
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 90/212 (42%), Gaps = 35/212 (16%)
Query: 519 PMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG---A 571
P EL+K E + + + +G G++G V + VAVK ++ ++ A
Sbjct: 2 PTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 61
Query: 572 SRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH---QSD 628
R++ E L++++H N+I ++ + + ++ ++ L + + +D
Sbjct: 62 KRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 120
Query: 629 DQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688
D V+ +++ ++Y+H ++H DLKPSN+ ++ D + DFGL
Sbjct: 121 DHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGL 167
Query: 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
A+ D G T Y APE
Sbjct: 168 ARHTDDEM-----------TGYVATRWYRAPE 188
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 90/215 (41%), Gaps = 30/215 (13%)
Query: 527 SKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVA---ECEALR 583
+K + + +G+G+F V + + A K+IN K K ++R F E R
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK-KLSARDFQKLEREARICR 60
Query: 584 NIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVN 643
++H N++++ + F VF+ + G L + + + E IQ++
Sbjct: 61 KLQHPNIVRL-----HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI- 114
Query: 644 IAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM---VAHVCDFGLAKFLSDHQLDTA 700
++ Y H + +VH +LKP N+LL + DFGLA ++D +
Sbjct: 115 -----LESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE---- 162
Query: 701 VKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
+ G GT GY++PE S DI+
Sbjct: 163 -----AWHGFAGTPGYLSPEVLKKDPYSKPVDIWA 192
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 100/217 (46%), Gaps = 36/217 (16%)
Query: 539 IGQGSFGYVYKG-TLGEDEM----IVAVKVINLKYKGAS----RSFVAECEALRNI-RHR 588
+G+G+FG V + G D+ VAVK++ +GA+ R+ ++E + L +I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLK---EGATHSEHRALMSELKILIHIGHHL 82
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCK----------LSL 638
N++ ++ C+ K + E+ + G+L +L ++ K L+L
Sbjct: 83 NVVNLLGACT----KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 639 IQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLD 698
+ + VA ME+L +H DL N+LL V +CDFGLA+ + ++
Sbjct: 139 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI--YKDP 193
Query: 699 TAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
V+ + + LK ++APE ++ D+++
Sbjct: 194 DYVRKGDARLPLK----WMAPETIFDRVYTIQSDVWS 226
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 75/184 (40%), Gaps = 24/184 (13%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+G G+FG V++ + K IN Y + E + + H LI +
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINL----- 113
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
F+ + E++ G L D + D K+S + +N ++++H H
Sbjct: 114 HDAFEDKYEMVLILEFLSGGELFDRIAAED-----YKMSEAEVINYMRQACEGLKHMHEH 168
Query: 659 CQPPMVHGDLKPSNVLLDHDMVAHV--CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGY 716
+VH D+KP N++ + + V DFGLA L+ D VK ++ T +
Sbjct: 169 S---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNP---DEIVKVTTA------TAEF 216
Query: 717 VAPE 720
APE
Sbjct: 217 AAPE 220
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 110/247 (44%), Gaps = 40/247 (16%)
Query: 510 DTSPMEKQFPMVSYAELSKATGEFSSSNM-----IGQGSFGYVYKG-TLGEDEM----IV 559
D P+++ + Y + EF + +G+G+FG V + G D+ V
Sbjct: 4 DELPLDEHCERLPY---DASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTV 60
Query: 560 AVKVINLKYKGAS----RSFVAECEALRNI-RHRNLIKIITICSSTDFKGTDFKAFVFEY 614
AVK++ +GA+ R+ ++E + L +I H N++ ++ C+ G V E+
Sbjct: 61 AVKMLK---EGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV-EF 113
Query: 615 MENGSLKDWLHQSDDQVEVCK------LSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDL 668
+ G+L +L ++ K L+L + + VA ME+L +H DL
Sbjct: 114 CKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDL 170
Query: 669 KPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEAS 728
N+LL V + DFGLA+ + ++ V+ + + LK ++APE +
Sbjct: 171 AARNILLSEKNVVKIXDFGLARDI--YKDPDYVRKGDARLPLK----WMAPETIFDRVYT 224
Query: 729 MTGDIFT 735
+ D+++
Sbjct: 225 IQSDVWS 231
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 93/217 (42%), Gaps = 35/217 (16%)
Query: 514 MEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
M ++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 570 G---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 61 SIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 626 --QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 120 QKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
D GLA+ D G T Y APE
Sbjct: 167 LDRGLARHTDDEM-----------TGYVATRWYRAPE 192
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 93/217 (42%), Gaps = 35/217 (16%)
Query: 514 MEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
M ++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 570 G---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 61 SIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 626 --QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 120 QKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
D GLA+ D G T Y APE
Sbjct: 167 LDAGLARHTDDEM-----------TGYVATRWYRAPE 192
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 516 KQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG- 570
++ P EL+K E + + + +G G++G V + VAVK ++ ++
Sbjct: 9 QERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI 68
Query: 571 --ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSD 628
A R++ E L++++H N+I ++ + + ++ ++ L +
Sbjct: 69 IHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL-------N 120
Query: 629 DQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688
+ V+ KL+ + + ++Y+H ++H DLKPSN+ ++ D + DFGL
Sbjct: 121 NIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGL 177
Query: 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
A+ D G T Y APE
Sbjct: 178 ARHTDD-----------EMTGYVATRWYRAPE 198
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 90/215 (41%), Gaps = 30/215 (13%)
Query: 527 SKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVA---ECEALR 583
+K + + +G+G+F V + + A K+IN K K ++R F E R
Sbjct: 1 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK-KLSARDFQKLEREARICR 59
Query: 584 NIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVN 643
++H N++++ + F VF+ + G L + + + E IQ++
Sbjct: 60 KLQHPNIVRL-----HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI- 113
Query: 644 IAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM---VAHVCDFGLAKFLSDHQLDTA 700
++ Y H + +VH +LKP N+LL + DFGLA ++D +
Sbjct: 114 -----LESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE---- 161
Query: 701 VKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
+ G GT GY++PE S DI+
Sbjct: 162 -----AWHGFAGTPGYLSPEVLKKDPYSKPVDIWA 191
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 123/327 (37%), Gaps = 79/327 (24%)
Query: 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEA--LRNIRH 587
T E+ +G+G+F V + A K+IN K A E EA R ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSL------KDWLHQSDDQVEVCKLSLIQR 641
N++++ S F VF+ + G L +++ ++D C +++
Sbjct: 63 PNIVRLHDSISEEGFH-----YLVFDLVTGGELFEDIVAREYYSEAD--ASHCIQQILES 115
Query: 642 VNIAIDVASAMEYLHHHCQ-PPMVHGDLKPSNVLL---DHDMVAHVCDFGLAKFLSDHQL 697
VN HC +VH DLKP N+LL + DFGLA + Q
Sbjct: 116 VN--------------HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ- 160
Query: 698 DTAVKTPSSSIGLKGTVGYVAPE------YGMGSEASMTGDI----FTGRRPIDAVFNEG 747
+ G GT GY++PE YG + G I G P ++E
Sbjct: 161 -------QAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF---WDED 210
Query: 748 -HSLHEFAKTA---LPEKVMEIVDPS---LLMEVMTNNSMIQEDKRVKTEECLNAIIRTG 800
H L++ K P + V P L+ +++T N KR+ E L +
Sbjct: 211 QHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPA----KRITASEAL----KHP 262
Query: 801 VLCSMESPFERMDMRDVVAKLCHTRET 827
+C R VA + H +ET
Sbjct: 263 WICQ----------RSTVASMMHRQET 279
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 26/190 (13%)
Query: 534 SSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKI 593
S + ++G G FG V+K + +A K+I + E + + H NLI++
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 594 ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAME 653
F+ + V EY++ G L D + D+ + +L I + + E
Sbjct: 152 YDA-----FESKNDIVLVMEYVDGGELFDRI--IDESYNLTELDTI------LFMKQICE 198
Query: 654 YLHHHCQPPMVHGDLKPSNVL-LDHDMVA-HVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
+ H Q ++H DLKP N+L ++ D + DFGLA+ P + +
Sbjct: 199 GIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYK----------PREKLKVN 248
Query: 712 -GTVGYVAPE 720
GT ++APE
Sbjct: 249 FGTPEFLAPE 258
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 98/217 (45%), Gaps = 36/217 (16%)
Query: 539 IGQGSFGYVYKG-TLGEDEM----IVAVKVINLKYKGAS----RSFVAECEALRNI-RHR 588
+G+G+FG V + G D+ VAVK++ +GA+ R+ ++E + L +I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLK---EGATHSEHRALMSELKILIHIGHHL 82
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCK----------LSL 638
N++ ++ C+ K + E+ + G+L +L ++ K L+L
Sbjct: 83 NVVNLLGACT----KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 639 IQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLD 698
+ + VA ME+L +H DL N+LL V +CDFGLA+ +
Sbjct: 139 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP-- 193
Query: 699 TAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
V+ + + LK ++APE ++ D+++
Sbjct: 194 DXVRKGDARLPLK----WMAPETIFDRVYTIQSDVWS 226
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 24/186 (12%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSF----VAECEALRNIRHRNLIKII 594
+G G+FG V KG +++ V V LK + + +AE ++ + + ++++I
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
IC + + V E E G L +L Q+ + + L+ +V++ M+Y
Sbjct: 85 GICEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG------MKY 132
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L + VH DL NVLL A + DFGL+K L + +T K V
Sbjct: 133 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPV 184
Query: 715 GYVAPE 720
+ APE
Sbjct: 185 KWYAPE 190
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 89/207 (42%), Gaps = 29/207 (14%)
Query: 520 MVSYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN---LKYKGASRSFV 576
+V E+ +F +IG+G+F V + + + A+K++N + +G F
Sbjct: 50 VVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFR 109
Query: 577 AECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQV--EVC 634
E + L N R + ++ F+ ++ V EY G L L + +++ E+
Sbjct: 110 EERDVLVNGDRRWITQL-----HFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMA 164
Query: 635 KLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG-LAKFLS 693
+ L + V +AID + Y VH D+KP N+LLD + DFG K +
Sbjct: 165 RFYLAEIV-MAIDSVHRLGY---------VHRDIKPDNILLDRCGHIRLADFGSCLKLRA 214
Query: 694 DHQLDTAVKTPSSSIGLKGTVGYVAPE 720
D + + V GT Y++PE
Sbjct: 215 DGTVRSLVAV--------GTPDYLSPE 233
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 21/174 (12%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK---GASRSFVAECEALRNIRHR 588
E+ IG G++G V VA+K I + A R+ + E + L++ +H
Sbjct: 56 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRT-LRELKILKHFKHD 114
Query: 589 NLIKIITICSSTDFKGTDFKAF--VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
N+I I I T G +FK+ V + ME+ L +H S L+L
Sbjct: 115 NIIAIKDILRPTVPYG-EFKSVYVVLDLMES-DLHQIIHSSQ------PLTLEHVRYFLY 166
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL----SDHQ 696
+ ++Y+H ++H DLKPSN+L++ + + DFG+A+ L ++HQ
Sbjct: 167 QLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQ 217
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 23/175 (13%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK---GASRSFVAECEALRNIRHR 588
E+ IG G++G V VA+K I + A R+ + E + L++ +H
Sbjct: 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRT-LRELKILKHFKHD 113
Query: 589 NLIKIITICSSTDFKGTDFKAF--VFEYMENGSLKDWLHQSDD-QVEVCKLSLIQRVNIA 645
N+I I I T G +FK+ V + ME+ L +H S +E + L Q
Sbjct: 114 NIIAIKDILRPTVPYG-EFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQ----- 166
Query: 646 IDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL----SDHQ 696
+ ++Y+H ++H DLKPSN+L++ + + DFG+A+ L ++HQ
Sbjct: 167 --LLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQ 216
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 31/216 (14%)
Query: 526 LSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNI 585
L ++ +IG+G+FG V + + A+K+++ K++ RS A R+I
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLS-KFEMIKRSDSAFFWEERDI 128
Query: 586 -RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNI 644
N ++ + + F+ + V EYM G L + + D + K + V +
Sbjct: 129 MAFANSPWVVQLFCA--FQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVV-L 185
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQL---DTAV 701
A+D +M ++H D+KP N+LLD + DFG + + + DTAV
Sbjct: 186 ALDAIHSM---------GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV 236
Query: 702 KTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGR 737
TP Y++PE S GD + GR
Sbjct: 237 GTPD----------YISPE----VLKSQGGDGYYGR 258
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 93/217 (42%), Gaps = 35/217 (16%)
Query: 514 MEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
M ++ P EL+K E + + + +G G++G V + + VAVK ++ ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 570 G---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 61 SIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 626 --QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 120 QKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
D GLA+ D G T Y APE
Sbjct: 167 LDGGLARHTDDEM-----------TGYVATRWYRAPE 192
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 91/215 (42%), Gaps = 35/215 (16%)
Query: 516 KQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG- 570
++ P EL+K E + + +G G++G V + VAVK ++ ++
Sbjct: 13 QERPTFYRQELNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI 72
Query: 571 --ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH--- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 73 IHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 131
Query: 626 QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D + D
Sbjct: 132 LTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILD 178
Query: 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
FGLA+ D G T Y APE
Sbjct: 179 FGLARHTDDEM-----------TGYVATRWYRAPE 202
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 24/186 (12%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSF----VAECEALRNIRHRNLIKII 594
+G G+FG V KG +++ V V LK + + +AE ++ + + ++++I
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
IC + + V E E G L +L Q+ + + L+ +V++ M+Y
Sbjct: 93 GICEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG------MKY 140
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L + VH DL NVLL A + DFGL+K L + +T K V
Sbjct: 141 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPV 192
Query: 715 GYVAPE 720
+ APE
Sbjct: 193 KWYAPE 198
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 88/210 (41%), Gaps = 29/210 (13%)
Query: 533 FSSSNMIGQGSFGYVY---KGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNI---- 585
F ++G+G +G V+ K T I A+KV+ + A +A RNI
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIA 645
+H ++ +I F+ + EY+ G L L + +E + +++A
Sbjct: 79 KHPFIVDLIYA-----FQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMA 133
Query: 646 IDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPS 705
L H Q +++ DLKP N++L+H + DFGL K ++ +
Sbjct: 134 ---------LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--------ESIHDGT 176
Query: 706 SSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
+ GT+ Y+APE M S + D ++
Sbjct: 177 VTHXFCGTIEYMAPEILMRSGHNRAVDWWS 206
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 88/210 (41%), Gaps = 29/210 (13%)
Query: 533 FSSSNMIGQGSFGYVY---KGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNI---- 585
F ++G+G +G V+ K T I A+KV+ + A +A RNI
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIA 645
+H ++ +I F+ + EY+ G L L + +E + +++A
Sbjct: 79 KHPFIVDLIYA-----FQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMA 133
Query: 646 IDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPS 705
L H Q +++ DLKP N++L+H + DFGL K ++ +
Sbjct: 134 ---------LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--------ESIHDGT 176
Query: 706 SSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
+ GT+ Y+APE M S + D ++
Sbjct: 177 VTHTFCGTIEYMAPEILMRSGHNRAVDWWS 206
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 539 IGQGSFGYVYKGT--LGEDEMIVAVKVINL-KYKGASRSFVAECEALRNIRHRNLIKIIT 595
+G G+FG V +G + + ++ VA+KV+ K + + E + + + + ++++I
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 596 ICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYL 655
+C + V E G L +L +++ V ++ + V+ M+YL
Sbjct: 78 VCQAEAL------MLVMEMAGGGPLHKFLVGKREEIPVSNVA-----ELLHQVSMGMKYL 126
Query: 656 HHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL-SDHQLDTAVKTPSSSIGLKGTV 714
+ VH DL NVLL + A + DFGL+K L +D TA S G K +
Sbjct: 127 E---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA-----RSAG-KWPL 177
Query: 715 GYVAPE 720
+ APE
Sbjct: 178 KWYAPE 183
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 642 VNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV 701
V A ++ +E LH +V+ DLKP N+LLD + D GLA + + Q
Sbjct: 289 VFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ----- 340
Query: 702 KTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
+ G GTVGY+APE + + D +
Sbjct: 341 ----TIKGRVGTVGYMAPEVVKNERYTFSPDWWA 370
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 82/191 (42%), Gaps = 37/191 (19%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG--ASRSFVAECEALRNIRHRNLIKIITI 596
+G G++G V VAVK ++ ++ +R E L++++H N+I ++ +
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 597 ----CSSTDFKGTDFKAFVFEYMENGSLKDWLH---QSDDQVEVCKLSLIQRVNIAIDVA 649
S DF + ++ + L + + SD+ V+ L++
Sbjct: 96 FTPATSIEDFS----EVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLR--------- 142
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
++Y+H ++H DLKPSNV ++ D + DFGLA+ Q D + G
Sbjct: 143 -GLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEM------TG 187
Query: 710 LKGTVGYVAPE 720
T Y APE
Sbjct: 188 YVATRWYRAPE 198
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 27/195 (13%)
Query: 508 FVDTSPMEKQFPMVSYAELSKATGEFSSSNMIGQGSFGYVYKGT---LGEDEMIVAVKVI 564
F+D + Q P E + +F + +G G+FG V + T LG+++ ++ V V
Sbjct: 21 FIDPT----QLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVK 74
Query: 565 NLK---YKGASRSFVAECEALRNI-RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSL 620
LK + + ++E + + ++ +H N++ ++ C+ G + EY G L
Sbjct: 75 MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG---GPVL--VITEYCCYGDL 129
Query: 621 KDWLHQSD----DQVEVCKLSLIQRVNIAIDVASAMEYL-HHHCQPPMVHGDLKPSNVLL 675
++L + D+ + L L ++ + VA M +L +C +H D+ NVLL
Sbjct: 130 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLL 185
Query: 676 DHDMVAHVCDFGLAK 690
+ VA + DFGLA+
Sbjct: 186 TNGHVAKIGDFGLAR 200
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 642 VNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV 701
V A ++ +E LH +V+ DLKP N+LLD + D GLA + + Q
Sbjct: 289 VFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ----- 340
Query: 702 KTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
+ G GTVGY+APE + + D +
Sbjct: 341 ----TIKGRVGTVGYMAPEVVKNERYTFSPDWWA 370
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 24/186 (12%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSF----VAECEALRNIRHRNLIKII 594
+G G+FG V KG +++ V V LK + + +AE ++ + + ++++I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
IC + + V E E G L +L Q+ + + L+ +V++ M+Y
Sbjct: 95 GICEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG------MKY 142
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L + VH DL NVLL A + DFGL+K L + +T K V
Sbjct: 143 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPV 194
Query: 715 GYVAPE 720
+ APE
Sbjct: 195 KWYAPE 200
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 24/186 (12%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSF----VAECEALRNIRHRNLIKII 594
+G G+FG V KG +++ V V LK + + +AE ++ + + ++++I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
IC + + V E E G L +L Q+ + + L+ +V++ M+Y
Sbjct: 95 GICEAESW------MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMG------MKY 142
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
L + VH DL NVLL A + DFGL+K L + +T K V
Sbjct: 143 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPV 194
Query: 715 GYVAPE 720
+ APE
Sbjct: 195 KWYAPE 200
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 123/327 (37%), Gaps = 79/327 (24%)
Query: 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEA--LRNIRH 587
T E+ +G+G+F V + A K+IN K A E EA R ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSL------KDWLHQSDDQVEVCKLSLIQR 641
N++++ S F VF+ + G L +++ ++D C +++
Sbjct: 63 PNIVRLHDSISEEGFH-----YLVFDLVTGGELFEDIVAREYYSEAD--ASHCIQQILES 115
Query: 642 VNIAIDVASAMEYLHHHCQ-PPMVHGDLKPSNVLL---DHDMVAHVCDFGLAKFLSDHQL 697
VN HC +VH DLKP N+LL + DFGLA + Q
Sbjct: 116 VN--------------HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ- 160
Query: 698 DTAVKTPSSSIGLKGTVGYVAPE------YGMGSEASMTGDI----FTGRRPIDAVFNEG 747
+ G GT GY++PE YG + G I G P ++E
Sbjct: 161 -------QAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF---WDED 210
Query: 748 -HSLHEFAKTA---LPEKVMEIVDPS---LLMEVMTNNSMIQEDKRVKTEECLNAIIRTG 800
H L++ K P + V P L+ +++T N KR+ E L +
Sbjct: 211 QHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPA----KRITASEAL----KHP 262
Query: 801 VLCSMESPFERMDMRDVVAKLCHTRET 827
+C R VA + H +ET
Sbjct: 263 WICQ----------RSTVASMMHRQET 279
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 37/211 (17%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVA------ECEALRNIR 586
+ + +G G F V K + A K I + +SR V+ E L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
H N+I + + + TD + E + G L D+L + + E ++++
Sbjct: 73 HPNVITLHEVYENK----TDV-ILILELVAGGELFDFLAEKESLTEEEATEFLKQI---- 123
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNV-LLDHDMVA---HVCDFGLAKFLSDHQLDTAVK 702
+ + YLH + H DLKP N+ LLD ++ + DFGLA H++D
Sbjct: 124 --LNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFG-- 171
Query: 703 TPSSSIGLKGTVGYVAPEY----GMGSEASM 729
+ + GT +VAPE +G EA M
Sbjct: 172 --NEFKNIFGTPAFVAPEIVNYEPLGLEADM 200
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 21/139 (15%)
Query: 628 DDQVEVCK--LSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDH-----DMV 680
+D ++C SL + IAI + S MEY+H +++ D+KP N L+ V
Sbjct: 113 EDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQV 169
Query: 681 AHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPI 740
H+ DF LAK D + + L GT Y++ +G E S D +
Sbjct: 170 IHIIDFALAKEYIDPETKKHIPYREHK-SLTGTARYMSINTHLGKEQSRRDD-------L 221
Query: 741 DAVFNEGHSLHEFAKTALP 759
+A+ GH F + +LP
Sbjct: 222 EAL---GHMFMYFLRGSLP 237
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 39/192 (20%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG---ASRSFVAECEALRNIRHRNLIKIIT 595
+G G++G V VAVK ++ ++ A R++ E L++++H N+I ++
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGLLD 86
Query: 596 ICSSTDFKGTDFKAFVFEYMENGSLKDWLHQ-------SDDQVEVCKLSLIQRVNIAIDV 648
+ + T + F Y+ + L+ SD+ V+ L++
Sbjct: 87 VFTP----ATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLR-------- 134
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSI 708
++Y+H ++H DLKPSNV ++ D + DFGLA+ Q D +
Sbjct: 135 --GLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLAR-----QADEEM------T 178
Query: 709 GLKGTVGYVAPE 720
G T Y APE
Sbjct: 179 GYVATRWYRAPE 190
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 21/139 (15%)
Query: 628 DDQVEVCK--LSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDH-----DMV 680
+D ++C SL + IAI + S MEY+H +++ D+KP N L+ V
Sbjct: 92 EDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQV 148
Query: 681 AHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPI 740
H+ DF LAK D + + L GT Y++ +G E S D +
Sbjct: 149 IHIIDFALAKEYIDPETKKHIPYREHK-SLTGTARYMSINTHLGKEQSRRDD-------L 200
Query: 741 DAVFNEGHSLHEFAKTALP 759
+A+ GH F + +LP
Sbjct: 201 EAL---GHMFMYFLRGSLP 216
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 99/243 (40%), Gaps = 45/243 (18%)
Query: 517 QFPMVSYAELSKATGEFSSSNMIGQGSFGYVYKGTL-----GEDEMIVAVKVINLKYKGA 571
Q P E + F + +G G+FG V + T + M VAVK++
Sbjct: 34 QLPYDHKWEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 91
Query: 572 SR-SFVAECEALRNI-RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDD 629
R + ++E + L + H N++ ++ C+ G + EY G L ++L + D
Sbjct: 92 EREALMSELKVLSYLGNHMNIVNLLGACT---IGGPTL--VITEYCCYGDLLNFLRRKRD 146
Query: 630 QVEVCKLS------------LIQRVNIAIDVASAMEYL-HHHCQPPMVHGDLKPSNVLLD 676
K S L ++ + VA M +L +C +H DL N+LL
Sbjct: 147 SFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLT 202
Query: 677 HDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGT----VGYVAPEYGMGSEASMTGD 732
H + +CDFGLA+ + + S+ +KG V ++APE + D
Sbjct: 203 HGRITKICDFGLARHIKN----------DSNYVVKGNARLPVKWMAPESIFNCVYTFESD 252
Query: 733 IFT 735
+++
Sbjct: 253 VWS 255
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 27/195 (13%)
Query: 508 FVDTSPMEKQFPMVSYAELSKATGEFSSSNMIGQGSFGYVYKGT---LGEDEMIVAVKVI 564
F+D + Q P E + +F + +G G+FG V + T LG+++ ++ V V
Sbjct: 29 FIDPT----QLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVK 82
Query: 565 NLK---YKGASRSFVAECEALRNI-RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSL 620
LK + + ++E + + ++ +H N++ ++ C+ G + EY G L
Sbjct: 83 MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG---GPVL--VITEYCCYGDL 137
Query: 621 KDWLHQSD----DQVEVCKLSLIQRVNIAIDVASAMEYL-HHHCQPPMVHGDLKPSNVLL 675
++L + D+ + L L ++ + VA M +L +C +H D+ NVLL
Sbjct: 138 LNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLL 193
Query: 676 DHDMVAHVCDFGLAK 690
+ VA + DFGLA+
Sbjct: 194 TNGHVAKIGDFGLAR 208
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 76/164 (46%), Gaps = 11/164 (6%)
Query: 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIR-HRNLIKIIT 595
++ +G F +VY+ A+K + + +R+ + E ++ + H N+++ +
Sbjct: 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCS 93
Query: 596 ICS----STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
S +D +F + + G L ++L + + + LS + I A
Sbjct: 94 AASIGKEESDTGQAEF--LLLTELCKGQLVEFLKKMESR---GPLSCDTVLKIFYQTCRA 148
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDH 695
++++H +PP++H DLK N+LL + +CDFG A +S +
Sbjct: 149 VQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHY 191
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 82/197 (41%), Gaps = 36/197 (18%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-----GASRSFVAECEALRNIRH 587
+ +G G++G V L D++ + I + K ++ + E L+ + H
Sbjct: 39 YQRVKKLGSGAYGEV---LLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH 95
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAID 647
N++K+ F+ V E + G L D+ + K + + I
Sbjct: 96 PNIMKLYDF-----FEDKRNYYLVMECYKGGEL------FDEIIHRMKFNEVDAAVIIKQ 144
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVCDFGL-AKFLSDHQLDTAVKT 703
V S + YLH H +VH DLKP N+LL + D + + DFGL A F + ++ +
Sbjct: 145 VLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERL-- 199
Query: 704 PSSSIGLKGTVGYVAPE 720
GT Y+APE
Sbjct: 200 --------GTAYYIAPE 208
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 76/193 (39%), Gaps = 30/193 (15%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN----LKYKGASRSFVAECEALRNIRH 587
+F IG GSFG V E A+K+++ +K K + + E L+ +
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAID 647
L+K+ FK V EYM G + L + + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYMPGGDMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
+ EYLH +++ DLKP N+L+D V DFG AK + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----------RVKGRT 195
Query: 708 IGLKGTVGYVAPE 720
L GT Y+APE
Sbjct: 196 WXLCGTPEYLAPE 208
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 86/198 (43%), Gaps = 23/198 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+G+GSFG V++ + AVK + L+ + C L + R I+ +
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEE--LVACAGLSSPR------IVPLYG 117
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
+ +G F+ E +E GSL + Q E L + + +EYLH
Sbjct: 118 AVR-EGPWVNIFM-ELLEGGSLGQLIKQMGCLPEDRALYYLGQA------LEGLEYLHTR 169
Query: 659 CQPPMVHGDLKPSNVLLDHD-MVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
++HGD+K NVLL D A +CDFG A L Q D K+ + + GT ++
Sbjct: 170 ---RILHGDVKADNVLLSSDGSRAALCDFGHALCL---QPDGLGKSLLTGDYIPGTETHM 223
Query: 718 APEYGMGSEASMTGDIFT 735
APE MG DI++
Sbjct: 224 APEVVMGKPCDAKVDIWS 241
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 665 HGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG 724
H D+KP N+L+ D A++ DFG+A +D +L T GT+ Y APE
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNT-------VGTLYYXAPERFSE 209
Query: 725 SEASMTGDIF 734
S A+ DI+
Sbjct: 210 SHATYRADIY 219
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 90/222 (40%), Gaps = 28/222 (12%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLI 591
+F +IG+GS+ V L + + I A+KV+ + + + +++ +
Sbjct: 6 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDED-IDWVQTEKHVFEQASN 64
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
+ + F+ FV EY+ G L H + KL + +++ A
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLM--FHMQRQR----KLPEEHARFYSAEISLA 118
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
+ YLH +++ DLK NVLLD + + D+G+ K ++ ++
Sbjct: 119 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--------EGLRPGDTTSXFC 167
Query: 712 GTVGYVAPE------YGMGSEASMTG----DIFTGRRPIDAV 743
GT Y+APE YG + G ++ GR P D V
Sbjct: 168 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 209
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 88/210 (41%), Gaps = 23/210 (10%)
Query: 528 KATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI--NLKYKGASRSFVAECEALRNI 585
+ + +G+G F Y+ T + + + A KV+ ++ K + ++ A+
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI--- 79
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIA 645
H++L + F+ DF V E SL + LH+ V + R I
Sbjct: 80 -HKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI- 136
Query: 646 IDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPS 705
++YLH++ ++H DLK N+ L+ DM + DFGLA + + D K
Sbjct: 137 ----QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKI---EFDGERKK-- 184
Query: 706 SSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
L GT Y+APE S DI++
Sbjct: 185 ---DLCGTPNYIAPEVLCKKGHSFEVDIWS 211
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 86/198 (43%), Gaps = 23/198 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+G+GSFG V++ + AVK + L+ + C L + R I+ +
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEE--LVACAGLSSPR------IVPLYG 133
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
+ +G F+ E +E GSL + Q E L + + +EYLH
Sbjct: 134 AVR-EGPWVNIFM-ELLEGGSLGQLIKQMGCLPEDRALYYLGQA------LEGLEYLHTR 185
Query: 659 CQPPMVHGDLKPSNVLLDHD-MVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
++HGD+K NVLL D A +CDFG A L Q D K+ + + GT ++
Sbjct: 186 ---RILHGDVKADNVLLSSDGSRAALCDFGHALCL---QPDGLGKSLLTGDYIPGTETHM 239
Query: 718 APEYGMGSEASMTGDIFT 735
APE MG DI++
Sbjct: 240 APEVVMGKPCDAKVDIWS 257
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 76/193 (39%), Gaps = 30/193 (15%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN----LKYKGASRSFVAECEALRNIRH 587
+F IG GSFG V E A+K+++ +K K + + E L+ +
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAID 647
L+K+ FK V EYM G + L + + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYMPGGDMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
+ EYLH +++ DLKP N+L+D V DFG AK + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----------RVKGRT 195
Query: 708 IGLKGTVGYVAPE 720
L GT Y+APE
Sbjct: 196 WXLCGTPEYLAPE 208
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 99/243 (40%), Gaps = 45/243 (18%)
Query: 517 QFPMVSYAELSKATGEFSSSNMIGQGSFGYVYKGTL-----GEDEMIVAVKVINLKYKGA 571
Q P E + F + +G G+FG V + T + M VAVK++
Sbjct: 27 QLPYDHKWEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 84
Query: 572 SR-SFVAECEALRNI-RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDD 629
R + ++E + L + H N++ ++ C+ G + EY G L ++L + D
Sbjct: 85 EREALMSELKVLSYLGNHMNIVNLLGACT---IGGPTL--VITEYCCYGDLLNFLRRKRD 139
Query: 630 QVEVCKLS------------LIQRVNIAIDVASAMEYL-HHHCQPPMVHGDLKPSNVLLD 676
K S L ++ + VA M +L +C +H DL N+LL
Sbjct: 140 SFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLT 195
Query: 677 HDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGT----VGYVAPEYGMGSEASMTGD 732
H + +CDFGLA+ + + S+ +KG V ++APE + D
Sbjct: 196 HGRITKICDFGLARDIKN----------DSNYVVKGNARLPVKWMAPESIFNCVYTFESD 245
Query: 733 IFT 735
+++
Sbjct: 246 VWS 248
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 31/217 (14%)
Query: 525 ELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRN 584
+L ++ +IG+G+FG V + A+K+++ K++ RS A R+
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLS-KFEMIKRSDSAFFWEERD 126
Query: 585 I-RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVN 643
I N ++ + + F+ + V EYM G L + + D + + + V
Sbjct: 127 IMAFANSPWVVQLFYA--FQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVV- 183
Query: 644 IAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDH---QLDTA 700
+A+D +M ++H D+KP N+LLD + DFG ++ + DTA
Sbjct: 184 LALDAIHSMGFIHR---------DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA 234
Query: 701 VKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGR 737
V TP Y++PE S GD + GR
Sbjct: 235 VGTPD----------YISPE----VLKSQGGDGYYGR 257
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 31/217 (14%)
Query: 525 ELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRN 584
+L ++ +IG+G+FG V + A+K+++ K++ RS A R+
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLS-KFEMIKRSDSAFFWEERD 121
Query: 585 I-RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVN 643
I N ++ + + F+ + V EYM G L + + D + + + V
Sbjct: 122 IMAFANSPWVVQLFYA--FQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVV- 178
Query: 644 IAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDH---QLDTA 700
+A+D +M ++H D+KP N+LLD + DFG ++ + DTA
Sbjct: 179 LALDAIHSMGFIHR---------DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA 229
Query: 701 VKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGR 737
V TP Y++PE S GD + GR
Sbjct: 230 VGTPD----------YISPE----VLKSQGGDGYYGR 252
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 37/211 (17%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVA------ECEALRNIR 586
+ + +G G F V K + A K I + +SR V+ E L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
H N+I + + + TD + E + G L D+L + + E ++++
Sbjct: 73 HPNVITLHEVYENK----TDV-ILILELVAGGELFDFLAEKESLTEEEATEFLKQI---- 123
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNV-LLDHDMVA---HVCDFGLAKFLSDHQLDTAVK 702
+ + YLH + H DLKP N+ LLD ++ + DFGLA H++D
Sbjct: 124 --LNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFG-- 171
Query: 703 TPSSSIGLKGTVGYVAPEY----GMGSEASM 729
+ + GT +VAPE +G EA M
Sbjct: 172 --NEFKNIFGTPEFVAPEIVNYEPLGLEADM 200
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 88/210 (41%), Gaps = 23/210 (10%)
Query: 528 KATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI--NLKYKGASRSFVAECEALRNI 585
+ + +G+G F Y+ T + + + A KV+ ++ K + ++ A+
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI--- 95
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIA 645
H++L + F+ DF V E SL + LH+ V + R I
Sbjct: 96 -HKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI- 152
Query: 646 IDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPS 705
++YLH++ ++H DLK N+ L+ DM + DFGLA + + D K
Sbjct: 153 ----QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKI---EFDGERKK-- 200
Query: 706 SSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
L GT Y+APE S DI++
Sbjct: 201 ---DLCGTPNYIAPEVLCKKGHSFEVDIWS 227
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 37/211 (17%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVA------ECEALRNIR 586
+ + +G G F V K + A K I + +SR V+ E L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
H N+I + + + TD + E + G L D+L + + E ++++
Sbjct: 73 HPNVITLHEVYENK----TDV-ILILELVAGGELFDFLAEKESLTEEEATEFLKQI---- 123
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNV-LLDHDMVA---HVCDFGLAKFLSDHQLDTAVK 702
+ + YLH + H DLKP N+ LLD ++ + DFGLA H++D
Sbjct: 124 --LNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFG-- 171
Query: 703 TPSSSIGLKGTVGYVAPEY----GMGSEASM 729
+ + GT +VAPE +G EA M
Sbjct: 172 --NEFKNIFGTPEFVAPEIVNYEPLGLEADM 200
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 92/217 (42%), Gaps = 35/217 (16%)
Query: 514 MEKQFPMVSYAELSKATGE----FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK 569
M ++ P EL+K E + + + +G G++G V + VAVK ++ ++
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 570 G---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLH- 625
A R++ E L++++H N+I ++ + + ++ ++ L + +
Sbjct: 61 SIIHAKRTY-RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 626 --QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683
+DD V+ +++ ++Y+H ++H DLKPSN+ ++ D +
Sbjct: 120 QKLTDDHVQFLIYQILR----------GLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
DF LA+ D G T Y APE
Sbjct: 167 LDFYLARHTDDEM-----------TGYVATRWYRAPE 192
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 90/222 (40%), Gaps = 28/222 (12%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLI 591
+F +IG+GS+ V L + + I A+KV+ + + + +++ +
Sbjct: 10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDED-IDWVQTEKHVFEQASN 68
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
+ + F+ FV EY+ G L H + KL + +++ A
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLM--FHMQRQR----KLPEEHARFYSAEISLA 122
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
+ YLH +++ DLK NVLLD + + D+G+ K ++ ++
Sbjct: 123 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--------EGLRPGDTTSXFC 171
Query: 712 GTVGYVAPE------YGMGSEASMTG----DIFTGRRPIDAV 743
GT Y+APE YG + G ++ GR P D V
Sbjct: 172 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 37/211 (17%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVA------ECEALRNIR 586
+ + +G G F V K + A K I + +SR V+ E L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
H N+I + + + TD + E + G L D+L + + E ++++
Sbjct: 73 HPNVITLHEVYENK----TDV-ILILELVAGGELFDFLAEKESLTEEEATEFLKQI---- 123
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNV-LLDHDMVA---HVCDFGLAKFLSDHQLDTAVK 702
+ + YLH + H DLKP N+ LLD ++ + DFGLA H++D
Sbjct: 124 --LNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFG-- 171
Query: 703 TPSSSIGLKGTVGYVAPEY----GMGSEASM 729
+ + GT +VAPE +G EA M
Sbjct: 172 --NEFKNIFGTPEFVAPEIVNYEPLGLEADM 200
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 99/242 (40%), Gaps = 43/242 (17%)
Query: 517 QFPMVSYAELSKATGEFSSSNMIGQGSFGYVYKGTL-----GEDEMIVAVKVINLKYKGA 571
Q P E + F + +G G+FG V + T + M VAVK++
Sbjct: 11 QLPYDHKWEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 68
Query: 572 SR-SFVAECEALRNI-RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDD 629
R + ++E + L + H N++ ++ C+ G + EY G L ++L + D
Sbjct: 69 EREALMSELKVLSYLGNHMNIVNLLGACT---IGGPTL--VITEYCCYGDLLNFLRRKRD 123
Query: 630 QVEVCKLS------------LIQRVNIAIDVASAMEYL-HHHCQPPMVHGDLKPSNVLLD 676
K S L ++ + VA M +L +C +H DL N+LL
Sbjct: 124 SFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLT 179
Query: 677 HDMVAHVCDFGLAKFL---SDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDI 733
H + +CDFGLA+ + S++ + + P V ++APE + D+
Sbjct: 180 HGRITKICDFGLARDIKNDSNYVVKGNARLP---------VKWMAPESIFNCVYTFESDV 230
Query: 734 FT 735
++
Sbjct: 231 WS 232
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 88/210 (41%), Gaps = 23/210 (10%)
Query: 528 KATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI--NLKYKGASRSFVAECEALRNI 585
+ + +G+G F Y+ T + + + A KV+ ++ K + ++ A+
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI--- 95
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIA 645
H++L + F+ DF V E SL + LH+ V + R I
Sbjct: 96 -HKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI- 152
Query: 646 IDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPS 705
++YLH++ ++H DLK N+ L+ DM + DFGLA + + D K
Sbjct: 153 ----QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKI---EFDGERKK-- 200
Query: 706 SSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
L GT Y+APE S DI++
Sbjct: 201 ---XLCGTPNYIAPEVLCKKGHSFEVDIWS 227
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 88/210 (41%), Gaps = 23/210 (10%)
Query: 528 KATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVI--NLKYKGASRSFVAECEALRNI 585
+ + +G+G F Y+ T + + + A KV+ ++ K + ++ A+
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAI--- 95
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIA 645
H++L + F+ DF V E SL + LH+ V + R I
Sbjct: 96 -HKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI- 152
Query: 646 IDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPS 705
++YLH++ ++H DLK N+ L+ DM + DFGLA + + D K
Sbjct: 153 ----QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKI---EFDGERKK-- 200
Query: 706 SSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
L GT Y+APE S DI++
Sbjct: 201 ---TLCGTPNYIAPEVLCKKGHSFEVDIWS 227
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 43.1 bits (100), Expect = 7e-04, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 8/139 (5%)
Query: 545 GYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKG 604
G ++KG ++++V V + SR F EC LR H N++ ++ C S
Sbjct: 24 GELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPP--- 80
Query: 605 TDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMV 664
+ + GSL + LH+ + V + Q V A+D A +L H +P +
Sbjct: 81 APHPTLITHWXPYGSLYNVLHEGTNFV----VDQSQAVKFALDXARGXAFL-HTLEPLIP 135
Query: 665 HGDLKPSNVLLDHDMVAHV 683
L +V +D D A +
Sbjct: 136 RHALNSRSVXIDEDXTARI 154
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 88/214 (41%), Gaps = 37/214 (17%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLI 591
+F IG GSFG +Y GT + VA+K+ N+K K H L+
Sbjct: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----------------HPQLL 50
Query: 592 ---KIITICSSTDFKGT---DFKAFVFEYMENGSLKDWLHQS-DDQVEVC--KLSLIQRV 642
KI I GT + + F E N + D L S +D C KLSL +
Sbjct: 51 YESKIYRILQG----GTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVL 106
Query: 643 NIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVA---HVCDFGLAKFLSDHQLDT 699
+A + + +E++H +H D+KP N L+ A ++ DFGLAK D
Sbjct: 107 MLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQ 163
Query: 700 AVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDI 733
+ + L GT Y + +G E S D+
Sbjct: 164 HIPY-RENKNLTGTARYASVNTHLGIEQSRRDDL 196
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 37/211 (17%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVA------ECEALRNIR 586
+ + +G G F V K + A K I + +SR V+ E L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
H N+I + + + TD + E + G L D+L + + E ++++ +
Sbjct: 73 HPNVITLHEVYENK----TDV-ILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNV-LLDHDMVA---HVCDFGLAKFLSDHQLDTAVK 702
Y H Q + H DLKP N+ LLD ++ + DFGLA H++D
Sbjct: 128 -------YYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFG-- 171
Query: 703 TPSSSIGLKGTVGYVAPEY----GMGSEASM 729
+ + GT +VAPE +G EA M
Sbjct: 172 --NEFKNIFGTPEFVAPEIVNYEPLGLEADM 200
>pdb|2Z7X|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 349 LDISSNQFSGVIPGTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNVSSNNLSGQI 408
LD+S+N+ + + L CV L+ L ++SN + + S S L S++ L++S N LS
Sbjct: 31 LDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLS 90
Query: 409 PEFLKNLSVLEFLSLSYNHFE--GEVPTKGVFSNKTKISL--QGNM 450
+ K LS L FL+L N ++ GE +FS+ TK+ + GNM
Sbjct: 91 SSWFKPLSSLTFLNLLGNPYKTLGET---SLFSHLTKLQILRVGNM 133
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 66/151 (43%), Gaps = 25/151 (16%)
Query: 343 LKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFH---GVIPLSLSFLK------- 392
LKNL +DIS N F +P T ++YL++SS H G IP +L L
Sbjct: 386 LKNLTNIDISKNSFHS-MPETCQWPEKMKYLNLSSTRIHSVTGCIPKTLEILDVSNNNLN 444
Query: 393 -------SIKELNVSSNNLSGQIPEFLKNLSVLEFLSLSYNHFEGEVPTKGVFSNKT--- 442
+KEL +S N L +P+ L +L L +S N + VP G+F T
Sbjct: 445 LFSLNLPQLKELYISRNKLMT-LPD-ASLLPMLLVLKISRNQLKS-VP-DGIFDRLTSLQ 500
Query: 443 KISLQGNMKLCGGIDELHLPSCPSKGSRKPK 473
KI L N C +L +K S+K +
Sbjct: 501 KIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQ 531
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 4/58 (6%)
Query: 363 TLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNVSS---NNLSGQIPEFLKNLSV 417
TL T L +DIS NSFH +P + + + +K LN+SS ++++G IP+ L+ L V
Sbjct: 382 TLLTLKNLTNIDISKNSFHS-MPETCQWPEKMKYLNLSSTRIHSVTGCIPKTLEILDV 438
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 90/222 (40%), Gaps = 28/222 (12%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLI 591
+F +IG+GS+ V L + + I A+KV+ + + + +++ +
Sbjct: 21 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDED-IDWVQTEKHVFEQASN 79
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
+ + F+ FV EY+ G L H + KL + +++ A
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLM--FHMQRQR----KLPEEHARFYSAEISLA 133
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
+ YLH +++ DLK NVLLD + + D+G+ K ++ ++
Sbjct: 134 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--------EGLRPGDTTSXFC 182
Query: 712 GTVGYVAPE------YGMGSEASMTG----DIFTGRRPIDAV 743
GT Y+APE YG + G ++ GR P D V
Sbjct: 183 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 224
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 86/198 (43%), Gaps = 23/198 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+G+GSFG V++ + AVK + L+ + C L + R I+ +
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEE--LVACAGLSSPR------IVPLYG 131
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
+ +G F+ E +E GSL + Q E L + + +EYLH
Sbjct: 132 AVR-EGPWVNIFM-ELLEGGSLGQLIKQMGCLPEDRALYYLGQA------LEGLEYLHTR 183
Query: 659 CQPPMVHGDLKPSNVLLDHD-MVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
++HGD+K NVLL D A +CDFG A L Q D K+ + + GT ++
Sbjct: 184 ---RILHGDVKADNVLLSSDGSRAALCDFGHALCL---QPDGLGKSLLTGDYIPGTETHM 237
Query: 718 APEYGMGSEASMTGDIFT 735
APE MG DI++
Sbjct: 238 APEVVMGKPCDAKVDIWS 255
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 31/217 (14%)
Query: 525 ELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRN 584
+L ++ +IG+G+FG V + A+K+++ K++ RS A R+
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLS-KFEMIKRSDSAFFWEERD 126
Query: 585 I-RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVN 643
I N ++ + + F+ + V EYM G L + L + D E V
Sbjct: 127 IMAFANSPWVVQLFYA--FQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVV 183
Query: 644 IAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDH---QLDTA 700
+A+D +M ++H D+KP N+LLD + DFG ++ + DTA
Sbjct: 184 LALDAIHSMGFIHR---------DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA 234
Query: 701 VKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGR 737
V TP Y++PE S GD + GR
Sbjct: 235 VGTPD----------YISPE----VLKSQGGDGYYGR 257
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 37/211 (17%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVA------ECEALRNIR 586
+ + +G G F V K + A K I + +SR V+ E L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
H N+I + + + TD + E + G L D+L + + E ++++
Sbjct: 73 HPNVITLHEVYENK----TDV-ILILELVAGGELFDFLAEKESLTEEEATEFLKQI---- 123
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNV-LLDHDMVA---HVCDFGLAKFLSDHQLDTAVK 702
+ + YLH + H DLKP N+ LLD ++ + DFGLA H++D
Sbjct: 124 --LNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFG-- 171
Query: 703 TPSSSIGLKGTVGYVAPEY----GMGSEASM 729
+ + GT +VAPE +G EA M
Sbjct: 172 --NEFKNIFGTPEFVAPEIVNYEPLGLEADM 200
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 37/211 (17%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVA------ECEALRNIR 586
+ + +G G F V K + A K I + +SR V+ E L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
H N+I + + + TD + E + G L D+L + + E ++++ +
Sbjct: 73 HPNVITLHEVYENK----TDV-ILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNV-LLDHDMVA---HVCDFGLAKFLSDHQLDTAVK 702
Y H Q + H DLKP N+ LLD ++ + DFGLA H++D
Sbjct: 128 -------YYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFG-- 171
Query: 703 TPSSSIGLKGTVGYVAPEY----GMGSEASM 729
+ + GT +VAPE +G EA M
Sbjct: 172 --NEFKNIFGTPEFVAPEIVNYEPLGLEADM 200
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 37/211 (17%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVA------ECEALRNIR 586
+ + +G G F V K + A K I + +SR V+ E L+ I+
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
H N+I + + + TD + E + G L D+L + + E ++++ +
Sbjct: 73 HPNVITLHEVYENK----TDV-ILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNV-LLDHDMVA---HVCDFGLAKFLSDHQLDTAVK 702
Y H Q + H DLKP N+ LLD ++ + DFGLA H++D
Sbjct: 128 -------YYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFG-- 171
Query: 703 TPSSSIGLKGTVGYVAPEY----GMGSEASM 729
+ + GT +VAPE +G EA M
Sbjct: 172 --NEFKNIFGTPEFVAPEIVNYEPLGLEADM 200
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 37/211 (17%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVA------ECEALRNIR 586
+ + +G G F V K + A K I + +SR V+ E L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
H N+I + + + TD + E + G L D+L + + E ++++
Sbjct: 73 HPNVITLHEVYENK----TDV-ILILELVAGGELFDFLAEKESLTEEEATEFLKQI---- 123
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNV-LLDHDMVA---HVCDFGLAKFLSDHQLDTAVK 702
+ + YLH + H DLKP N+ LLD ++ + DFGLA H++D
Sbjct: 124 --LNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFG-- 171
Query: 703 TPSSSIGLKGTVGYVAPEY----GMGSEASM 729
+ + GT +VAPE +G EA M
Sbjct: 172 --NEFKNIFGTPEFVAPEIVNYEPLGLEADM 200
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 37/211 (17%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVA------ECEALRNIR 586
+ + +G G F V K + A K I + +SR V+ E L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
H N+I + + + TD + E + G L D+L + + E ++++
Sbjct: 73 HPNVITLHEVYENK----TDV-ILILELVAGGELFDFLAEKESLTEEEATEFLKQI---- 123
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNV-LLDHDMVA---HVCDFGLAKFLSDHQLDTAVK 702
+ + YLH + H DLKP N+ LLD ++ + DFGLA H++D
Sbjct: 124 --LNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFG-- 171
Query: 703 TPSSSIGLKGTVGYVAPEY----GMGSEASM 729
+ + GT +VAPE +G EA M
Sbjct: 172 --NEFKNIFGTPEFVAPEIVNYEPLGLEADM 200
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 76/193 (39%), Gaps = 30/193 (15%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN----LKYKGASRSFVAECEALRNIRH 587
+F +G GSFG V E A+K+++ +K K + + E L+ +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAID 647
L+K+ FK V EY+ G + L + + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
+ EYLH +++ DLKP N+L+D V DFG AK + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 195
Query: 708 IGLKGTVGYVAPE 720
L GT Y+APE
Sbjct: 196 WXLAGTPEYLAPE 208
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 37/211 (17%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVA------ECEALRNIR 586
+ + +G G F V K + A K I + +SR V+ E L+ I+
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
H N+I + + + TD + E + G L D+L + + E ++++
Sbjct: 72 HPNVITLHEVYENK----TDV-ILILELVAGGELFDFLAEKESLTEEEATEFLKQI---- 122
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNV-LLDHDMVA---HVCDFGLAKFLSDHQLDTAVK 702
+ + YLH + H DLKP N+ LLD ++ + DFGLA H++D
Sbjct: 123 --LNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFG-- 170
Query: 703 TPSSSIGLKGTVGYVAPEY----GMGSEASM 729
+ + GT +VAPE +G EA M
Sbjct: 171 --NEFKNIFGTPEFVAPEIVNYEPLGLEADM 199
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 37/211 (17%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVA------ECEALRNIR 586
+ + +G G F V K + A K I + +SR V+ E L+ I+
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
H N+I + + + TD + E + G L D+L + + E ++++
Sbjct: 72 HPNVITLHEVYENK----TDV-ILILELVAGGELFDFLAEKESLTEEEATEFLKQI---- 122
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNV-LLDHDMVA---HVCDFGLAKFLSDHQLDTAVK 702
+ + YLH + H DLKP N+ LLD ++ + DFGLA H++D
Sbjct: 123 --LNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFG-- 170
Query: 703 TPSSSIGLKGTVGYVAPEY----GMGSEASM 729
+ + GT +VAPE +G EA M
Sbjct: 171 --NEFKNIFGTPEFVAPEIVNYEPLGLEADM 199
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 76/193 (39%), Gaps = 30/193 (15%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN----LKYKGASRSFVAECEALRNIRH 587
+F +G GSFG V E A+K+++ +K K + + E L+ +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAID 647
L+K+ FK V EY+ G + L + + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
+ EYLH +++ DLKP N+L+D V DFG AK + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 195
Query: 708 IGLKGTVGYVAPE 720
L GT Y+APE
Sbjct: 196 WXLXGTPEYLAPE 208
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 88/209 (42%), Gaps = 45/209 (21%)
Query: 539 IGQGSFGYVYK----GTLGEDEMIVAVKVINLKYKGASRSFVA------ECEALRNIRHR 588
+G G F V K GT E A K I + +SR V+ E LR IRH
Sbjct: 13 LGSGQFAIVRKCRQKGTGKE----YAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHP 68
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N+I + I + TD + E + G L D+L + + E ++++
Sbjct: 69 NIITLHDIFENK----TDV-VLILELVSGGELFDFLAEKESLTEDEATQFLKQI------ 117
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH----VCDFGLAKFLSDHQLDTAVKTP 704
+ YLH + H DLKP N++L V + + DFG+A H+++ +
Sbjct: 118 LDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA-----HKIEAGNEFK 169
Query: 705 SSSIGLKGTVGYVAPEY----GMGSEASM 729
+ + GT +VAPE +G EA M
Sbjct: 170 N----IFGTPEFVAPEIVNYEPLGLEADM 194
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 99/243 (40%), Gaps = 45/243 (18%)
Query: 517 QFPMVSYAELSKATGEFSSSNMIGQGSFGYVYKGTL-----GEDEMIVAVKVINLKYKGA 571
Q P E + F + +G G+FG V + T + M VAVK++
Sbjct: 29 QLPYDHKWEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 86
Query: 572 SR-SFVAECEALRNI-RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDD 629
R + ++E + L + H N++ ++ C+ G + EY G L ++L + D
Sbjct: 87 EREALMSELKVLSYLGNHMNIVNLLGACT---IGGPTL--VITEYCCYGDLLNFLRRKRD 141
Query: 630 QVEVCKLS------------LIQRVNIAIDVASAMEYL-HHHCQPPMVHGDLKPSNVLLD 676
K S L ++ + VA M +L +C +H DL N+LL
Sbjct: 142 SFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLT 197
Query: 677 HDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGT----VGYVAPEYGMGSEASMTGD 732
H + +CDFGLA+ + + S+ +KG V ++APE + D
Sbjct: 198 HGRITKICDFGLARDIKN----------DSNYVVKGNARLPVKWMAPESIFNCVYTFESD 247
Query: 733 IFT 735
+++
Sbjct: 248 VWS 250
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 31/194 (15%)
Query: 517 QFPMVSYAELSKATGEFSSSNMIGQGSFGYVYKGTL-----GEDEMIVAVKVINLKYKGA 571
Q P E + F + +G G+FG V + T + M VAVK++
Sbjct: 34 QLPYDHKWEFPRNRLSFGKT--LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 91
Query: 572 SR-SFVAECEALRNI-RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDD 629
R + ++E + L + H N++ ++ C+ G + EY G L ++L + D
Sbjct: 92 EREALMSELKVLSYLGNHMNIVNLLGACT---IGGPTL--VITEYCCYGDLLNFLRRKRD 146
Query: 630 QVEVCKLS------------LIQRVNIAIDVASAMEYL-HHHCQPPMVHGDLKPSNVLLD 676
K S L ++ + VA M +L +C +H DL N+LL
Sbjct: 147 SFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLT 202
Query: 677 HDMVAHVCDFGLAK 690
H + +CDFGLA+
Sbjct: 203 HGRITKICDFGLAR 216
>pdb|2Z80|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
pdb|2Z80|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 353
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 349 LDISSNQFSGVIPGTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNVSSNNLSGQI 408
LD+S+N+ + + L CV L+ L ++SN + + S S L S++ L++S N LS
Sbjct: 57 LDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLS 116
Query: 409 PEFLKNLSVLEFLSLSYNHFE--GEVPTKGVFSNKTKISL--QGNM 450
+ K LS L FL+L N ++ GE +FS+ TK+ + GNM
Sbjct: 117 SSWFKPLSSLTFLNLLGNPYKTLGET---SLFSHLTKLQILRVGNM 159
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 21/156 (13%)
Query: 527 SKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNI- 585
S+ T EF IG G FG V+K D I A+K G+ V E ALR +
Sbjct: 7 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS----VDEQNALREVY 62
Query: 586 ------RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLI 639
+H ++++ + + D EY GSL D + ++ + K + +
Sbjct: 63 AHAVLGQHSHVVRYFSAWAE-----DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAEL 117
Query: 640 QRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLL 675
+ ++ + V + Y+H +VH D+KPSN+ +
Sbjct: 118 K--DLLLQVGRGLRYIH---SMSLVHMDIKPSNIFI 148
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 88/209 (42%), Gaps = 45/209 (21%)
Query: 539 IGQGSFGYVYK----GTLGEDEMIVAVKVINLKYKGASRSFVA------ECEALRNIRHR 588
+G G F V K GT E A K I + +SR V+ E LR IRH
Sbjct: 20 LGSGQFAIVRKCRQKGTGKE----YAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHP 75
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N+I + I + TD + E + G L D+L + + E ++++
Sbjct: 76 NIITLHDIFENK----TDV-VLILELVSGGELFDFLAEKESLTEDEATQFLKQI------ 124
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH----VCDFGLAKFLSDHQLDTAVKTP 704
+ YLH + H DLKP N++L V + + DFG+A H+++ +
Sbjct: 125 LDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA-----HKIEAGNEFK 176
Query: 705 SSSIGLKGTVGYVAPEY----GMGSEASM 729
+ + GT +VAPE +G EA M
Sbjct: 177 N----IFGTPEFVAPEIVNYEPLGLEADM 201
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 21/139 (15%)
Query: 628 DDQVEVCK--LSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLL-----DHDMV 680
+D ++C +L + IAI + + MEY+H +++ D+KP N L+
Sbjct: 87 EDLFDLCDRTFTLKTVLMIAIQLITRMEYVHTKS---LIYRDVKPENFLVGRPGTKRQHA 143
Query: 681 AHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPI 740
H+ DFGLAK D + + L GT Y++ +G E S D +
Sbjct: 144 IHIIDFGLAKEYIDPETKKHIPY-REHKSLTGTARYMSINTHLGKEQSRRDD-------L 195
Query: 741 DAVFNEGHSLHEFAKTALP 759
+A+ GH F + +LP
Sbjct: 196 EAL---GHMFMYFLRGSLP 211
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 21/156 (13%)
Query: 527 SKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNI- 585
S+ T EF IG G FG V+K D I A+K G+ V E ALR +
Sbjct: 5 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS----VDEQNALREVY 60
Query: 586 ------RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLI 639
+H ++++ + + D EY GSL D + ++ + K + +
Sbjct: 61 AHAVLGQHSHVVRYFSAWAE-----DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAEL 115
Query: 640 QRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLL 675
+ ++ + V + Y+H +VH D+KPSN+ +
Sbjct: 116 K--DLLLQVGRGLRYIH---SMSLVHMDIKPSNIFI 146
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 21/156 (13%)
Query: 527 SKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNI- 585
S+ T EF IG G FG V+K D I A+K G+ V E ALR +
Sbjct: 3 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS----VDEQNALREVY 58
Query: 586 ------RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLI 639
+H ++++ + + D EY GSL D + ++ + K + +
Sbjct: 59 AHAVLGQHSHVVRYFSAWAE-----DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAEL 113
Query: 640 QRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLL 675
+ ++ + V + Y+H +VH D+KPSN+ +
Sbjct: 114 K--DLLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 144
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 21/156 (13%)
Query: 527 SKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNI- 585
S+ T EF IG G FG V+K D I A+K G+ V E ALR +
Sbjct: 5 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS----VDEQNALREVY 60
Query: 586 ------RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLI 639
+H ++++ + + D EY GSL D + ++ + K + +
Sbjct: 61 AHAVLGQHSHVVRYFSAWAE-----DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAEL 115
Query: 640 QRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLL 675
+ ++ + V + Y+H +VH D+KPSN+ +
Sbjct: 116 K--DLLLQVGRGLRYIH---SMSLVHMDIKPSNIFI 146
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 29/203 (14%)
Query: 539 IGQGSFGYVYKGT---LGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIIT 595
IG GSFG +Y GT GE+ VA+K+ +K K E + + ++ I I
Sbjct: 17 IGSGSFGDIYLGTDIAAGEE---VAIKLECVKTKHP--QLHIESKIYKMMQGGVGIPTIR 71
Query: 596 ICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVC--KLSLIQRVNIAIDVASAME 653
C + D+ V E + SL+D + C K SL + +A + S +E
Sbjct: 72 WCGAE----GDYNVMVMELL-GPSLEDLFN-------FCSRKFSLKTVLLLADQMISRIE 119
Query: 654 YLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
Y+H +H D+KP N L+ + ++ DFGLAK D + + + L
Sbjct: 120 YIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENK-NL 175
Query: 711 KGTVGYVAPEYGMGSEASMTGDI 733
GT Y + +G E S D+
Sbjct: 176 TGTARYASINTHLGIEQSRRDDL 198
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 31/199 (15%)
Query: 508 FVDTSPMEKQFPMVSYAELSKATGEFSSSNMIGQGSFGYVYKGT---LGEDEMIVAVKVI 564
F+D + Q P E + +F + +G G+FG V + T LG+++ ++ V V
Sbjct: 29 FIDPT----QLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVK 82
Query: 565 NLK---YKGASRSFVAECEALRNI-RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSL 620
LK + + ++E + + ++ +H N++ ++ C+ G + EY G L
Sbjct: 83 MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG---GPVL--VITEYCCYGDL 137
Query: 621 KDWLH------QSDDQVEVCKLSLIQR--VNIAIDVASAMEYL-HHHCQPPMVHGDLKPS 671
++L ++D + +L R ++ + VA M +L +C +H D+
Sbjct: 138 LNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNC----IHRDVAAR 193
Query: 672 NVLLDHDMVAHVCDFGLAK 690
NVLL + VA + DFGLA+
Sbjct: 194 NVLLTNGHVAKIGDFGLAR 212
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 134/330 (40%), Gaps = 57/330 (17%)
Query: 462 PSCPSKGSRKPKIILLKVLIPVAVSSLI------LSSCLTIVYARKRRSAQKFVDTSPME 515
PSC S+G+ + K + + L+ S+ L+S AR RS + T E
Sbjct: 15 PSCLSRGAHE-KFSVEEYLVHALQGSVSSGQAHSLTSLAKTWAARGSRSREPSPKTEDNE 73
Query: 516 -----KQFPMVSYA---ELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK 567
++ V Y E+ AT + +G+GSFG V++ + AVK + L+
Sbjct: 74 GVLLTEKLKPVDYEYREEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRLE 129
Query: 568 YKGASRSFVAE----CEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDW 623
F AE C L + R I+ + + +G F+ E +E GSL
Sbjct: 130 V------FRAEELMACAGLTSPR------IVPLYGAVR-EGPWVNIFM-ELLEGGSLGQL 175
Query: 624 LHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMV-AH 682
+ + E L + + +EYLH ++HGD+K NVLL D A
Sbjct: 176 VKEQGCLPEDRALYYLGQA------LEGLEYLHSR---RILHGDVKADNVLLSSDGSHAA 226
Query: 683 VCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDA 742
+CDFG A L Q D K+ + + GT ++APE +G D+++ +
Sbjct: 227 LCDFGHAVCL---QPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLH 283
Query: 743 VFNEGHSLHEFAKTAL-------PEKVMEI 765
+ N H +F + L P V EI
Sbjct: 284 MLNGCHPWTQFFRGPLCLKIASEPPPVREI 313
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 88/187 (47%), Gaps = 26/187 (13%)
Query: 539 IGQGSFGYVYKGT--LGEDEMIVAVKVINL-KYKGASRSFVAECEALRNIRHRNLIKIIT 595
+G G+FG V +G + + ++ VA+KV+ K + + E + + + + ++++I
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 596 ICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLS-LIQRVNIAIDVASAMEY 654
+C + V E G L +L +++ V ++ L+ +V++ M+Y
Sbjct: 404 VCQAEAL------MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMG------MKY 451
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL-SDHQLDTAVKTPSSSIGLKGT 713
L + VH +L NVLL + A + DFGL+K L +D TA S G K
Sbjct: 452 LE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA-----RSAG-KWP 502
Query: 714 VGYVAPE 720
+ + APE
Sbjct: 503 LKWYAPE 509
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 88/209 (42%), Gaps = 45/209 (21%)
Query: 539 IGQGSFGYVYK----GTLGEDEMIVAVKVINLKYKGASRSFVA------ECEALRNIRHR 588
+G G F V K GT E A K I + +SR V+ E LR IRH
Sbjct: 34 LGSGQFAIVRKCRQKGTGKE----YAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHP 89
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N+I + I + TD + E + G L D+L + + E ++++
Sbjct: 90 NIITLHDIFENK----TDV-VLILELVSGGELFDFLAEKESLTEDEATQFLKQI------ 138
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH----VCDFGLAKFLSDHQLDTAVKTP 704
+ YLH + H DLKP N++L V + + DFG+A H+++ +
Sbjct: 139 LDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA-----HKIEAGNEFK 190
Query: 705 SSSIGLKGTVGYVAPEY----GMGSEASM 729
+ + GT +VAPE +G EA M
Sbjct: 191 N----IFGTPEFVAPEIVNYEPLGLEADM 215
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 77/193 (39%), Gaps = 30/193 (15%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN----LKYKGASRSFVAECEALRNIRH 587
+F +G GSFG V E A+K+++ +K K + + E L+ +
Sbjct: 63 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 121
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAID 647
L+K+ FK V EY+ G + L + + + S A
Sbjct: 122 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQ 170
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
+ EYLH +++ DLKP N+L+D V DFG AK + ++
Sbjct: 171 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGAT 216
Query: 708 IGLKGTVGYVAPE 720
L GT Y+APE
Sbjct: 217 WTLCGTPEYLAPE 229
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 37/211 (17%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVA------ECEALRNIR 586
+ + +G G F V K + A K I + +SR V+ E L+ I+
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
H N+I + + + TD + E + G L D+L + + E ++++ +
Sbjct: 73 HPNVITLHEVYENK----TDV-ILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNV-LLDHDMVA---HVCDFGLAKFLSDHQLDTAVK 702
Y H Q + H DLKP N+ LLD ++ + DFGLA H++D
Sbjct: 128 -------YYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFG-- 171
Query: 703 TPSSSIGLKGTVGYVAPEY----GMGSEASM 729
+ + GT +VAPE +G EA M
Sbjct: 172 --NEFKNIFGTPEFVAPEIVNYEPLGLEADM 200
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 19/146 (13%)
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSD-DQVEVCKLSLIQRVNIAIDVAS 650
++ ++ SS F + F+ E+ SL D + D D +++ ++ + VA
Sbjct: 158 RLDSVTSSESFASSGFQ-------EDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVAR 210
Query: 651 AMEYLH-HHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIG 709
ME+L C +H DL N+LL + V +CDFGLA+ + ++ V+ + +
Sbjct: 211 GMEFLSSRKC----IHRDLAARNILLSENNVVKICDFGLARDI--YKNPDYVRKGDTRLP 264
Query: 710 LKGTVGYVAPEYGMGSEASMTGDIFT 735
LK ++APE S D+++
Sbjct: 265 LK----WMAPESIFDKIYSTKSDVWS 286
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 90/222 (40%), Gaps = 28/222 (12%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLI 591
+F +IG+GS+ V L + + I A++V+ + + + +++ +
Sbjct: 53 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDED-IDWVQTEKHVFEQASN 111
Query: 592 KIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651
+ + F+ FV EY+ G L H + KL + +++ A
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLM--FHMQRQR----KLPEEHARFYSAEISLA 165
Query: 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLK 711
+ YLH +++ DLK NVLLD + + D+G+ K ++ ++
Sbjct: 166 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--------EGLRPGDTTSTFC 214
Query: 712 GTVGYVAPE------YGMGSEASMTG----DIFTGRRPIDAV 743
GT Y+APE YG + G ++ GR P D V
Sbjct: 215 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 256
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 29/203 (14%)
Query: 539 IGQGSFGYVYKGT---LGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIIT 595
IG GSFG +Y GT GE+ VA+K+ +K K E + + ++ I I
Sbjct: 15 IGSGSFGDIYLGTDIAAGEE---VAIKLECVKTKHP--QLHIESKIYKMMQGGVGIPTIR 69
Query: 596 ICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVC--KLSLIQRVNIAIDVASAME 653
C + D+ V E + SL+D + C K SL + +A + S +E
Sbjct: 70 WCGAE----GDYNVMVMELL-GPSLEDLFN-------FCSRKFSLKTVLLLADQMISRIE 117
Query: 654 YLHHHCQPPMVHGDLKPSNVLL---DHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL 710
Y+H +H D+KP N L+ + ++ DFGLAK D + + + L
Sbjct: 118 YIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENK-NL 173
Query: 711 KGTVGYVAPEYGMGSEASMTGDI 733
GT Y + +G E S D+
Sbjct: 174 TGTARYASINTHLGIEQSRRDDL 196
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITIC 597
+G+G++G V E VAVK++++K + E + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG-- 72
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + + EY G L D + E ++ + + YLH
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLH- 122
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+ H D+KP N+LLD + DFGLA + + + + GT+ YV
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MXGTLPYV 174
Query: 718 APE 720
APE
Sbjct: 175 APE 177
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 75/193 (38%), Gaps = 30/193 (15%)
Query: 532 EFSSSNMIGQGSFGYV----YKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRH 587
+F +G GSFG V +K T M + K +K K + + E L+ +
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 93
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAID 647
L+K+ FK V EY+ G + L + + + S A
Sbjct: 94 PFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQ 142
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
+ EYLH +++ DLKP N+L+D V DFG AK + +
Sbjct: 143 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 188
Query: 708 IGLKGTVGYVAPE 720
L GT Y+APE
Sbjct: 189 WXLCGTPEYLAPE 201
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 75/193 (38%), Gaps = 30/193 (15%)
Query: 532 EFSSSNMIGQGSFGYV----YKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRH 587
+F +G GSFG V +K T M + K +K K + + E L+ +
Sbjct: 63 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 121
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAID 647
L+K+ FK V EY+ G + L + + + S A
Sbjct: 122 PFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQ 170
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
+ EYLH +++ DLKP N+L+D V DFG AK + +
Sbjct: 171 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 216
Query: 708 IGLKGTVGYVAPE 720
L GT Y+APE
Sbjct: 217 WXLCGTPEYLAPE 229
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 75/193 (38%), Gaps = 30/193 (15%)
Query: 532 EFSSSNMIGQGSFGYV----YKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRH 587
+F +G GSFG V +K T M + K +K K + + E L+ +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 101
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAID 647
L+K+ FK V EY+ G + L + + + S A
Sbjct: 102 PFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQ 150
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
+ EYLH +++ DLKP N+L+D V DFG AK + +
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 196
Query: 708 IGLKGTVGYVAPE 720
L GT Y+APE
Sbjct: 197 WXLCGTPEYLAPE 209
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 75/193 (38%), Gaps = 30/193 (15%)
Query: 532 EFSSSNMIGQGSFGYV----YKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRH 587
+F +G GSFG V +K T M + K +K K + + E L+ +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 101
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAID 647
L+K+ FK V EY+ G + L + + + S A
Sbjct: 102 PFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQ 150
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
+ EYLH +++ DLKP N+L+D V DFG AK + +
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 196
Query: 708 IGLKGTVGYVAPE 720
L GT Y+APE
Sbjct: 197 WXLCGTPEYLAPE 209
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 76/193 (39%), Gaps = 30/193 (15%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN----LKYKGASRSFVAECEALRNIRH 587
+F +G GSFG V E A+K+++ +K K + + E L+ +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAID 647
L+K+ FK V EY+ G + L + + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
+ EYLH +++ DLKP N+L+D V DFG AK + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 195
Query: 708 IGLKGTVGYVAPE 720
L GT Y+APE
Sbjct: 196 WXLCGTPEYLAPE 208
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 75/193 (38%), Gaps = 30/193 (15%)
Query: 532 EFSSSNMIGQGSFGYV----YKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRH 587
+F +G GSFG V +K T M + K +K K + + E L+ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAID 647
L+K+ FK V EY+ G + L + + + S A
Sbjct: 101 PFLVKL-----EYSFKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
+ EYLH +++ DLKP N+L+D V DFG AK + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 195
Query: 708 IGLKGTVGYVAPE 720
L GT Y+APE
Sbjct: 196 WXLCGTPEYLAPE 208
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 76/193 (39%), Gaps = 30/193 (15%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN----LKYKGASRSFVAECEALRNIRH 587
+F +G GSFG V E A+K+++ +K K + + E L+ +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAID 647
L+K+ FK V EY+ G + L + + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
+ EYLH +++ DLKP N+L+D V DFG AK + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 195
Query: 708 IGLKGTVGYVAPE 720
L GT Y+APE
Sbjct: 196 WXLCGTPEYLAPE 208
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 80/199 (40%), Gaps = 24/199 (12%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+G G+FG V++ T A K + ++ + E + + +RH L+ +
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNL----- 219
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
F+ + ++E+M G L + D E K+S + V V + ++H +
Sbjct: 220 HDAFEDDNEMVMIYEFMSGGEL---FEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMHEN 274
Query: 659 CQPPMVHGDLKPSNVLLDHDMVAH--VCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGY 716
VH DLKP N++ + DFGL L Q +VK + GT +
Sbjct: 275 N---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ---SVKVTT------GTAEF 322
Query: 717 VAPEYGMGSEASMTGDIFT 735
APE G D+++
Sbjct: 323 AAPEVAEGKPVGYYTDMWS 341
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 27/187 (14%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEA--LRNIRHRNLIKIITI 596
+G+G+F V + A K+IN K A E EA R ++H N++++
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL--- 86
Query: 597 CSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLH 656
S +G + +F+ + G L + + + E IQ++ A+ LH
Sbjct: 87 HDSISEEGHHY--LIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV--------LH 136
Query: 657 HHCQPPMVHGDLKPSNVLLDHDM---VAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGT 713
H Q +VH DLKP N+LL + + DFGLA + Q + G GT
Sbjct: 137 CH-QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ--------QAWFGFAGT 187
Query: 714 VGYVAPE 720
GY++PE
Sbjct: 188 PGYLSPE 194
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 76/193 (39%), Gaps = 30/193 (15%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN----LKYKGASRSFVAECEALRNIRH 587
+F +G GSFG V E A+K+++ +K K + + E L+ +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAID 647
L+K+ FK V EY+ G + L + + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
+ EYLH +++ DLKP N+L+D V DFG AK + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 195
Query: 708 IGLKGTVGYVAPE 720
L GT Y+APE
Sbjct: 196 WXLCGTPEYLAPE 208
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 75/193 (38%), Gaps = 30/193 (15%)
Query: 532 EFSSSNMIGQGSFGYV----YKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRH 587
+F +G GSFG V +K T M + K +K K + + E L+ +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 101
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAID 647
L+K+ FK V EY+ G + L + + + S A
Sbjct: 102 PFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQ 150
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
+ EYLH +++ DLKP N+L+D V DFG AK + +
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 196
Query: 708 IGLKGTVGYVAPE 720
L GT Y+APE
Sbjct: 197 WXLCGTPEYLAPE 209
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 76/193 (39%), Gaps = 30/193 (15%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN----LKYKGASRSFVAECEALRNIRH 587
+F +G GSFG V E A+K+++ +K K + + E L+ +
Sbjct: 43 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 101
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAID 647
L+K+ FK V EY+ G + L + + + S A
Sbjct: 102 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQ 150
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
+ EYLH +++ DLKP N+L+D V DFG AK + +
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 196
Query: 708 IGLKGTVGYVAPE 720
L GT Y+APE
Sbjct: 197 WXLCGTPEYLAPE 209
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 76/193 (39%), Gaps = 30/193 (15%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN----LKYKGASRSFVAECEALRNIRH 587
+F +G GSFG V E A+K+++ +K K + + E L+ +
Sbjct: 29 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 87
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAID 647
L+K+ FK V EY+ G + L + + + S A
Sbjct: 88 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQ 136
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
+ EYLH +++ DLKP N+L+D V DFG AK + +
Sbjct: 137 IVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAK-----------RVKGRT 182
Query: 708 IGLKGTVGYVAPE 720
L GT Y+APE
Sbjct: 183 WXLCGTPEYLAPE 195
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 11/78 (14%)
Query: 643 NIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVK 702
+ + + A+ YL + ++H D+KPSN+LLD +CDFG++ L +D K
Sbjct: 128 KMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRL----VDDKAK 181
Query: 703 TPSSSIGLKGTVGYVAPE 720
S+ G Y+APE
Sbjct: 182 DRSA-----GCAAYMAPE 194
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 76/193 (39%), Gaps = 30/193 (15%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN----LKYKGASRSFVAECEALRNIRH 587
+F +G GSFG V E A+K+++ +K K + + E L+ +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAID 647
L+K+ FK V EY+ G + L + + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
+ EYLH +++ DLKP N+L+D V DFG AK + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 195
Query: 708 IGLKGTVGYVAPE 720
L GT Y+APE
Sbjct: 196 WXLCGTPEYLAPE 208
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 75/193 (38%), Gaps = 30/193 (15%)
Query: 532 EFSSSNMIGQGSFGYV----YKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRH 587
+F +G GSFG V +K T M + K +K K + + E L+ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAID 647
L+K+ FK V EY+ G + L + + + S A
Sbjct: 101 PFLVKL-----EYSFKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
+ EYLH +++ DLKP N+L+D V DFG AK + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 195
Query: 708 IGLKGTVGYVAPE 720
L GT Y+APE
Sbjct: 196 WXLCGTPEYLAPE 208
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 76/193 (39%), Gaps = 30/193 (15%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN----LKYKGASRSFVAECEALRNIRH 587
+F +G GSFG V E A+K+++ +K K + + E L+ +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAID 647
L+K+ FK V EY+ G + L + + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
+ EYLH +++ DLKP N+L+D V DFG AK + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 195
Query: 708 IGLKGTVGYVAPE 720
L GT Y+APE
Sbjct: 196 WXLCGTPEYLAPE 208
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 75/193 (38%), Gaps = 30/193 (15%)
Query: 532 EFSSSNMIGQGSFGYV----YKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRH 587
+F +G GSFG V +K T M + K +K K + + E L+ +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAID 647
L+K+ FK V EY+ G + L + + + S A
Sbjct: 101 PFLVKL-----EYSFKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
+ EYLH +++ DLKP N+L+D V DFG AK + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 195
Query: 708 IGLKGTVGYVAPE 720
L GT Y+APE
Sbjct: 196 WXLCGTPEYLAPE 208
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 76/193 (39%), Gaps = 30/193 (15%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN----LKYKGASRSFVAECEALRNIRH 587
+F IG GSFG V E A+K+++ +K K + + E L+ +
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAID 647
L+K+ FK V EY+ G + L + + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
+ EYLH +++ DLKP N+L+D V DFG AK + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----------RVKGRT 195
Query: 708 IGLKGTVGYVAPE 720
L GT Y+APE
Sbjct: 196 WXLCGTPEYLAPE 208
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 76/193 (39%), Gaps = 30/193 (15%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN----LKYKGASRSFVAECEALRNIRH 587
+F +G GSFG V E A+K+++ +K K + + E L+ +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAID 647
L+K+ FK V EY+ G + L + + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
+ EYLH +++ DLKP N+L+D V DFG AK + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 195
Query: 708 IGLKGTVGYVAPE 720
L GT Y+APE
Sbjct: 196 WXLCGTPEYLAPE 208
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 14/76 (18%)
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A + EYLH +++ DLKP N+++D V DFGLAK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAK-----------RVK 192
Query: 705 SSSIGLKGTVGYVAPE 720
+ L GT Y+APE
Sbjct: 193 GRTWXLCGTPEYLAPE 208
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 37/211 (17%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVA------ECEALRNIR 586
+ + +G G F V K + A K I + +SR V+ E L+ I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 587 HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAI 646
H N+I + + + TD + E + G L D+L + + E ++++ +
Sbjct: 73 HPNVITLHEVYENK----TDV-ILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNV-LLDHDMVA---HVCDFGLAKFLSDHQLDTAVK 702
Y H Q + H DLKP N+ LLD ++ + DFGLA H++D
Sbjct: 128 -------YYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA-----HKIDFG-- 171
Query: 703 TPSSSIGLKGTVGYVAPEY----GMGSEASM 729
+ + GT +VAPE +G EA M
Sbjct: 172 --NEFKNIFGTPEFVAPEIVNYEPLGLEADM 200
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 14/76 (18%)
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 142 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 187
Query: 705 SSSIGLKGTVGYVAPE 720
+ L GT Y+APE
Sbjct: 188 GRTWXLCGTPEYLAPE 203
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 79/200 (39%), Gaps = 26/200 (13%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+G G+FG V++ T A K + ++ + E + + +RH L+ +
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA-- 116
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658
F+ + ++E+M G L + D E K+S + V V + ++H +
Sbjct: 117 ---FEDDNEMVMIYEFMSGGEL---FEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMHEN 168
Query: 659 CQPPMVHGDLKPSNVLL--DHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGL-KGTVG 715
VH DLKP N++ + DFGL L P S+ + GT
Sbjct: 169 N---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD----------PKQSVKVTTGTAE 215
Query: 716 YVAPEYGMGSEASMTGDIFT 735
+ APE G D+++
Sbjct: 216 FAAPEVAEGKPVGYYTDMWS 235
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 14/76 (18%)
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 192
Query: 705 SSSIGLKGTVGYVAPE 720
+ L GT Y+APE
Sbjct: 193 GRTWXLCGTPEYLAPE 208
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 14/76 (18%)
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 192
Query: 705 SSSIGLKGTVGYVAPE 720
+ L GT Y+APE
Sbjct: 193 GRTWXLCGTPEYLAPE 208
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 14/76 (18%)
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 192
Query: 705 SSSIGLKGTVGYVAPE 720
+ L GT Y+APE
Sbjct: 193 GRTWXLCGTPEYLAPE 208
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 14/76 (18%)
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 192
Query: 705 SSSIGLKGTVGYVAPE 720
+ L GT Y+APE
Sbjct: 193 GRTWXLCGTPEYLAPE 208
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 14/76 (18%)
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 193
Query: 705 SSSIGLKGTVGYVAPE 720
+ L GT Y+APE
Sbjct: 194 GRTWXLCGTPEYLAPE 209
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 14/76 (18%)
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 193
Query: 705 SSSIGLKGTVGYVAPE 720
+ L GT Y+APE
Sbjct: 194 GRTWXLCGTPEYLAPE 209
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 14/76 (18%)
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 140 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 185
Query: 705 SSSIGLKGTVGYVAPE 720
+ L GT Y+APE
Sbjct: 186 GRTWXLCGTPEYLAPE 201
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 14/76 (18%)
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 192
Query: 705 SSSIGLKGTVGYVAPE 720
+ L GT Y+APE
Sbjct: 193 GRTWXLCGTPEYLAPE 208
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 14/76 (18%)
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 192
Query: 705 SSSIGLKGTVGYVAPE 720
+ L GT Y+APE
Sbjct: 193 GRTWXLCGTPEYLAPE 208
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 14/76 (18%)
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 192
Query: 705 SSSIGLKGTVGYVAPE 720
+ L GT Y+APE
Sbjct: 193 GRTWXLCGTPEYLAPE 208
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 14/76 (18%)
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 192
Query: 705 SSSIGLKGTVGYVAPE 720
+ L GT Y+APE
Sbjct: 193 GRTWXLCGTPEYLAPE 208
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 14/76 (18%)
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 192
Query: 705 SSSIGLKGTVGYVAPE 720
+ L GT Y+APE
Sbjct: 193 GRTWXLCGTPEYLAPE 208
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 24/181 (13%)
Query: 523 YAELSKATGEFSSSNMIGQGSFGYVYKGT----LGEDEMIVAVKVINLKYKGASRSFVAE 578
Y + + + F + IG+G+F VY T +G +E I +I + AE
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH---PIRIAAE 69
Query: 579 CEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSL 638
+ L ++ + + C F+ D Y+E+ S D L+ LS
Sbjct: 70 LQCLTVAGGQDNVMGVKYC----FRKNDHVVIAMPYLEHESFLDILN---------SLSF 116
Query: 639 IQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH-VCDFGLAKFLSDHQL 697
+ +++ A++ +H Q +VH D+KPSN L + + + + DFGLA+ D ++
Sbjct: 117 QEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI 173
Query: 698 D 698
+
Sbjct: 174 E 174
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 14/76 (18%)
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 133 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 178
Query: 705 SSSIGLKGTVGYVAPE 720
+ L GT Y+APE
Sbjct: 179 GRTWTLCGTPEYLAPE 194
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 14/76 (18%)
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 192
Query: 705 SSSIGLKGTVGYVAPE 720
+ L GT Y+APE
Sbjct: 193 GRTWXLCGTPEYLAPE 208
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 14/76 (18%)
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 193
Query: 705 SSSIGLKGTVGYVAPE 720
+ L GT Y+APE
Sbjct: 194 GRTWTLCGTPEYLAPE 209
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 14/76 (18%)
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A + EYLH +++ DLKP N+++D V DFGLAK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAK-----------RVK 192
Query: 705 SSSIGLKGTVGYVAPE 720
+ L GT Y+APE
Sbjct: 193 GRTWXLCGTPEYLAPE 208
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 99/239 (41%), Gaps = 38/239 (15%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAE----CEALRNIRHRNLIKII 594
+G+GSFG V++ + AVK + L+ F AE C L + R I+
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEV------FRAEELMACAGLTSPR------IV 129
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
+ + +G F+ E +E GSL + + E L + + +EY
Sbjct: 130 PLYGAVR-EGPWVNIFM-ELLEGGSLGQLVKEQGCLPEDRALYYLGQA------LEGLEY 181
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMV-AHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGT 713
LH ++HGD+K NVLL D A +CDFG A L Q D K + + GT
Sbjct: 182 LHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCL---QPDGLGKDLLTGDYIPGT 235
Query: 714 VGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTAL-------PEKVMEI 765
++APE +G D+++ + + N H +F + L P V EI
Sbjct: 236 ETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREI 294
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 87/224 (38%), Gaps = 55/224 (24%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVIN------LKYKGASRSFVAECEALRNIRHRNLIK 592
IGQGS+G V + I A+K++N + K R E ++ + H N+ +
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVER-IKTEVRLMKKLHHPNIAR 92
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDD-----------QVEVC------- 634
+ + ++ + V E G L D L+ D + ++C
Sbjct: 93 LYEV-----YEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNE 147
Query: 635 ------------KLSLIQR----VNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLL--D 676
L +QR NI + SA+ YLH+ + H D+KP N L +
Sbjct: 148 EAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTN 204
Query: 677 HDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPE 720
+ DFGL+K ++L+ ++ GT +VAPE
Sbjct: 205 KSFEIKLVDFGLSKEF--YKLNNGEYYGMTTKA--GTPYFVAPE 244
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 14/76 (18%)
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 168 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVK 213
Query: 705 SSSIGLKGTVGYVAPE 720
+ L GT Y+APE
Sbjct: 214 GRTWXLCGTPEYLAPE 229
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 14/76 (18%)
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A + EYLH +++ DLKP N+L+D V DFG AK +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----------RVK 193
Query: 705 SSSIGLKGTVGYVAPE 720
+ L GT Y+APE
Sbjct: 194 GRTWXLCGTPEYLAPE 209
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITIC 597
+G+G++G V E VAVK++++K + E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + + EY G L D + E ++ + + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLH- 121
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+ H D+KP N+LLD + DFGLA + + + + GT+ YV
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MXGTLPYV 173
Query: 718 APE 720
APE
Sbjct: 174 APE 176
>pdb|1G9U|A Chain A, Crystal Structure Of Yopm-leucine Rich Effector Protein
From Yersinia Pestis
pdb|1JL5|A Chain A, Novel Molecular Architecture Of Yopm-A Leucine-Rich
Effector Protein From Yersinia Pestis
Length = 454
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 154/396 (38%), Gaps = 77/396 (19%)
Query: 175 SLKALSLADNQFGGELPHSIANLSSTVINFGIGRNQISGTIPPGIRNLVNLIGFGAEENQ 234
SLK+L + +N +++L + G+ NQ+ P ++N L + N
Sbjct: 112 SLKSLLVDNNNLKA-----LSDLPPLLEYLGVSNNQLEKL--PELQNSSFLKIIDVDNNS 164
Query: 235 LHGTIPDAIGELK-------NLQKLCLFRN--FLQGRIPSGLGNLTKLANLELSSNSLQG 285
L +PD L+ L++L +N FL I + +L KL +L LS S+
Sbjct: 165 L-KKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTA-IYADNNSLKKLPDLPLSLESIVA 222
Query: 286 --NIPSSLGNCQNLMSFTA--SQNKLTGALPHQLLSITTXXXXXXXXXXXXXXXXXXQVG 341
NI L QNL T + N L LP S+
Sbjct: 223 GNNILEELPELQNLPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELP------ 276
Query: 342 HLKNLVILDISSNQFSGV--IPGTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNV 399
++L LD+S N FSG+ +P L YL+ SSN + L S++ELNV
Sbjct: 277 --QSLTFLDVSENIFSGLSELPPNLY------YLNASSNEIRSLCDLP----PSLEELNV 324
Query: 400 SSNNLSGQIPEFLKNLSVLEFLSLSYNHFEGEVPTKGVFSNKTKISLQGNMKLCGGIDEL 459
S+N L ++P LE L S+NH EVP +L + +L
Sbjct: 325 SNNKL-IELPALPPR---LERLIASFNHL-AEVP-----------------ELPQNLKQL 362
Query: 460 HLPSCPSKGSRKPKIILLKVLIPVAVSSLILSSCLTIVYARKRRSAQKFVDTSPMEKQFP 519
H+ P + IP +V L ++S L V + Q V+T+P+ ++FP
Sbjct: 363 HVEYNPLREFPD---------IPESVEDLRMNSHLAEVPELPQNLKQLHVETNPL-REFP 412
Query: 520 MVSYAELSKATGEFSSSNMIGQGSFGYVYKGTLGED 555
+ S +S ++ F + L +D
Sbjct: 413 DIPE---SVEDLRMNSERVVDPYEFAHETTDKLEDD 445
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 76/193 (39%), Gaps = 30/193 (15%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN----LKYKGASRSFVAECEALRNIRH 587
+F +G GSFG V E A+K+++ +K K + + E L+ +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAID 647
L+K+ FK V EY+ G + L + + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
+ EYLH +++ DLKP N+++D V DFG AK + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAK-----------RVKGRT 195
Query: 708 IGLKGTVGYVAPE 720
L GT Y+APE
Sbjct: 196 WXLCGTPEYLAPE 208
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 33/200 (16%)
Query: 508 FVDTSPMEKQFPMVSYAELSKATGEFSSSNMIGQGSFGYVYKGT---LGEDEMIVAVKVI 564
F+D + Q P E + +F + +G G+FG V + T LG+++ ++ V V
Sbjct: 29 FIDPT----QLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVK 82
Query: 565 NLK---YKGASRSFVAECEALRNI-RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSL 620
LK + + ++E + + ++ +H N++ ++ C+ G + EY G L
Sbjct: 83 MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG---GPVL--VITEYCCYGDL 137
Query: 621 KDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPM----------VHGDLKP 670
++L + +E IA AS + LH Q +H D+
Sbjct: 138 LNFLRRKSRVLETDPA-----FAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAA 192
Query: 671 SNVLLDHDMVAHVCDFGLAK 690
NVLL + VA + DFGLA+
Sbjct: 193 RNVLLTNGHVAKIGDFGLAR 212
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 78/196 (39%), Gaps = 31/196 (15%)
Query: 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEAL-RNIRHR 588
T + IG GS+ + M AVK+I+ + R E E L R +H
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIID----KSKRDPTEEIEILLRYGQHP 76
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N+I + + + + V E M+ G L D + + S + + +
Sbjct: 77 NIITLKDV-----YDDGKYVYVVTELMKGGELLDKILRQK------FFSEREASAVLFTI 125
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHD----MVAHVCDFGLAKFLSDHQLDTAVKTP 704
+EYLH +VH DLKPSN+L + +CDFG AK L + + TP
Sbjct: 126 TKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE--NGLLMTP 180
Query: 705 SSSIGLKGTVGYVAPE 720
T +VAPE
Sbjct: 181 CY------TANFVAPE 190
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 14/76 (18%)
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A + EYLH +++ DLKP N+++D V DFG AK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAK-----------RVK 192
Query: 705 SSSIGLKGTVGYVAPE 720
+ L GT Y+APE
Sbjct: 193 GRTWXLCGTPEYLAPE 208
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 91/207 (43%), Gaps = 38/207 (18%)
Query: 508 FVDTSPMEKQFPMVSYAELSKATGEFSSSNMIGQGSFGYVYKGT---LGEDEMIVAVKVI 564
F+D + Q P E + +F + +G G+FG V + T LG+++ ++ V V
Sbjct: 14 FIDPT----QLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVK 67
Query: 565 NLK---YKGASRSFVAECEALRNI-RHRNLIKIITICSS----------------TDFKG 604
LK + + ++E + + ++ +H N++ ++ C+ +F
Sbjct: 68 MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR 127
Query: 605 TDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYL-HHHCQPPM 663
+A + + G + L + D + L L ++ + VA M +L +C
Sbjct: 128 RKAEAMLGPSLAPGQDPEGLDKEDGR----PLELRDLLHFSSQVAQGMAFLASKNC---- 179
Query: 664 VHGDLKPSNVLLDHDMVAHVCDFGLAK 690
+H D+ NVLL + VA + DFGLA+
Sbjct: 180 IHRDVAARNVLLTNGHVAKIGDFGLAR 206
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITIC 597
+G+G++G V E VAVK++++K + E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG-- 71
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + + EY G L D + E ++ + + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 122
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+ H D+KP N+LLD + DFGLA + + + + GT+ YV
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MXGTLPYV 173
Query: 718 APE 720
APE
Sbjct: 174 APE 176
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 27/199 (13%)
Query: 527 SKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEA--LRN 584
++ T E+ +G+G+F V + A +IN K A E EA R
Sbjct: 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRL 66
Query: 585 IRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNI 644
++H N++++ S +G + +F+ + G L + + + E IQ++
Sbjct: 67 LKHPNIVRL---HDSISEEGHHY--LIFDLVTGGELFEDIVAREYYSEADASHCIQQILE 121
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM---VAHVCDFGLAKFLSDHQLDTAV 701
A+ LH H Q +VH +LKP N+LL + + DFGLA + Q
Sbjct: 122 AV--------LHCH-QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ----- 167
Query: 702 KTPSSSIGLKGTVGYVAPE 720
+ G GT GY++PE
Sbjct: 168 ---QAWFGFAGTPGYLSPE 183
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 14/76 (18%)
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A + EYLH +++ DLKP N+++D V DFG AK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----------RVK 192
Query: 705 SSSIGLKGTVGYVAPE 720
+ L GT Y+APE
Sbjct: 193 GRTWXLCGTPEYLAPE 208
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 14/76 (18%)
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A + EYLH +++ DLKP N+++D V DFG AK +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----------RVK 193
Query: 705 SSSIGLKGTVGYVAPE 720
+ L GT Y+APE
Sbjct: 194 GRTWXLCGTPEYLAPE 209
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 14/76 (18%)
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A + EYLH +++ DLKP N+++D V DFG AK +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----------RVK 193
Query: 705 SSSIGLKGTVGYVAPE 720
+ L GT Y+APE
Sbjct: 194 GRTWXLCGTPEYLAPE 209
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 14/76 (18%)
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A + EYLH +++ DLKP N+++D V DFG AK +
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----------RVK 192
Query: 705 SSSIGLKGTVGYVAPE 720
+ L GT Y+APE
Sbjct: 193 GRTWXLCGTPEYLAPE 208
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 14/76 (18%)
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A + EYLH +++ DLKP N+++D V DFG AK +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----------RVK 193
Query: 705 SSSIGLKGTVGYVAPE 720
+ L GT Y+APE
Sbjct: 194 GRTWXLCGTPEYLAPE 209
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 39.7 bits (91), Expect = 0.007, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITIC 597
+G+G++G V E VAVK++++K + E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + + EY G L D + E ++ + + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLH- 121
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+ H D+KP N+LLD + DFGLA + + + + GT+ YV
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPYV 173
Query: 718 APE 720
APE
Sbjct: 174 APE 176
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 39.7 bits (91), Expect = 0.007, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITIC 597
+G+G++G V E VAVK++++K + E + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + + EY G L D + E ++ + + YLH
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLH- 122
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+ H D+KP N+LLD + DFGLA + + + + GT+ YV
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPYV 174
Query: 718 APE 720
APE
Sbjct: 175 APE 177
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 39.7 bits (91), Expect = 0.007, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITIC 597
+G+G++G V E VAVK++++K + E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + + EY G L D + E ++ + + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLH- 121
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+ H D+KP N+LLD + DFGLA + + + + GT+ YV
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPYV 173
Query: 718 APE 720
APE
Sbjct: 174 APE 176
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 39.7 bits (91), Expect = 0.007, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITIC 597
+G+G++G V E VAVK++++K + E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + + EY G L D + E ++ + + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLH- 121
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+ H D+KP N+LLD + DFGLA + + + + GT+ YV
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPYV 173
Query: 718 APE 720
APE
Sbjct: 174 APE 176
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 39.7 bits (91), Expect = 0.007, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITIC 597
+G+G++G V E VAVK++++K + E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + + EY G L D + E ++ + + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLH- 121
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+ H D+KP N+LLD + DFGLA + + + + GT+ YV
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPYV 173
Query: 718 APE 720
APE
Sbjct: 174 APE 176
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 39.7 bits (91), Expect = 0.007, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITIC 597
+G+G++G V E VAVK++++K + E + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + + EY G L D + E ++ + + YLH
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLH- 122
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+ H D+KP N+LLD + DFGLA + + + + GT+ YV
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPYV 174
Query: 718 APE 720
APE
Sbjct: 175 APE 177
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%)
Query: 46 LRNLVSLNVAENKFSGMFPRSICNISSLELIQLALNRFSGNLPFDIVVNLPNLKALAIGG 105
LRNL+ L+++ F +SSLE++++A N F N DI L NL L +
Sbjct: 420 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 479
Query: 106 NNFFGSIPYSLSNASNLELLDLSVNQFKG 134
P + ++ S+L++L+++ NQ K
Sbjct: 480 CQLEQLSPTAFNSLSSLQVLNMASNQLKS 508
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 22 LSDLEVIRIMGNSLGGK-IPTTLGLLRNLVSLNVAENKFSGMFPRSICNISSLELIQLAL 80
LS LEV+++ GNS +P LRNL L++++ + + P + ++SSL+++ +A
Sbjct: 444 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMAS 503
Query: 81 NRFSGNLPFDIVVNLPNLKALAIGGNNFFGSIP 113
N+ +P I L +L+ + + N + S P
Sbjct: 504 NQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 535
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 6/135 (4%)
Query: 343 LKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFH-GVIPLSLSFLKSIKELNVSS 401
L+NL+ LDIS G + LE L ++ NSF +P + L+++ L++S
Sbjct: 420 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 479
Query: 402 NNLSGQIPEFLKNLSVLEFLSLSYNHFEGEVPTKGVFSNKT---KISLQGNMKLCGGIDE 458
L P +LS L+ L+++ N + VP G+F T KI L N C
Sbjct: 480 CQLEQLSPTAFNSLSSLQVLNMASNQLKS-VP-DGIFDRLTSLQKIWLHTNPWDCSCPRI 537
Query: 459 LHLPSCPSKGSRKPK 473
+L +K S+K +
Sbjct: 538 DYLSRWLNKNSQKEQ 552
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 4/127 (3%)
Query: 343 LKNLVILDISSNQFS-GVIPGTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNVSS 401
L +L +L ++ N F +P + L +LD+S + P + + L S++ LN++S
Sbjct: 444 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMAS 503
Query: 402 NNLSGQIPEFLKNLSVLEFLSLSYNHFEGEVPTKGVFS---NKTKISLQGNMKLCGGIDE 458
N L L+ L+ + L N ++ P S NK QG+ K G
Sbjct: 504 NQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGSAKCSGSGKP 563
Query: 459 LHLPSCP 465
+ CP
Sbjct: 564 VRSIICP 570
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 243 IGELKNLQKLCLFRNFLQG-RIPSGLGNLTKLANLELSSNSLQG 285
IG LK L++L + N +Q ++P NLT L +L+LSSN +Q
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 343 LKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNVSSN 402
L +L L ++ N + G S L+ L + + + LK++KELNV+ N
Sbjct: 75 LSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHN 134
Query: 403 NL-SGQIPEFLKNLSVLEFLSLSYNHFEG 430
+ S ++PE+ NL+ LE L LS N +
Sbjct: 135 LIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 340 VGHLKNLVILDISSNQFSGV-IPGTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSI 394
+GHLK L L+++ N +P S LE+LD+SSN + L L +
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 14/76 (18%)
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTP 704
A + EYLH +++ DLKP N+++D V DFG AK +
Sbjct: 148 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----------RVK 193
Query: 705 SSSIGLKGTVGYVAPE 720
+ L GT Y+APE
Sbjct: 194 GRTWXLCGTPEYLAPE 209
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 43/206 (20%)
Query: 508 FVDTSPMEKQFPMVSYAELSKATGEFSSSNMIGQGSFGYVYKGT---LGEDEMIVAVKVI 564
F+D + Q P E + +F + +G G+FG V + T LG+++ ++ V V
Sbjct: 29 FIDPT----QLPYNEKWEFPRNNLQFGKT--LGAGAFGKVVEATAFGLGKEDAVLKVAVK 82
Query: 565 NLK---YKGASRSFVAECEALRNI-RHRNLIKIITICSS-------TDFKGT-DFKAFV- 611
LK + + ++E + + ++ +H N++ ++ C+ T++ D F+
Sbjct: 83 MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR 142
Query: 612 ------FEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYL-HHHCQPPMV 664
EY N S H ++Q LS ++ + VA M +L +C +
Sbjct: 143 RKRPPGLEYSYNPS-----HNPEEQ-----LSSRDLLHFSSQVAQGMAFLASKNC----I 188
Query: 665 HGDLKPSNVLLDHDMVAHVCDFGLAK 690
H D+ NVLL + VA + DFGLA+
Sbjct: 189 HRDVAARNVLLTNGHVAKIGDFGLAR 214
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 19/163 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
IG G FG +Y A V+ ++Y+ F +E + + + ++ IK
Sbjct: 45 IGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLF-SELKFYQRVAKKDCIKKWIERK 103
Query: 599 STDFKG---------TDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVA 649
D+ G T+FK + +M L L + Q K S + + + I +
Sbjct: 104 QLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTV--LQLGIRML 161
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLLDH---DMVAHVCDFGLA 689
+EY+H + VHGD+K +N+LL + D V ++ D+GL+
Sbjct: 162 DVLEYIHEN---EYVHGDIKAANLLLGYKNPDQV-YLADYGLS 200
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 75/192 (39%), Gaps = 30/192 (15%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN----LKYKGASRSFVAECEALRNIRH 587
+F +G GSFG V E A+K+++ +K K + + E L+ +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAID 647
L+K+ FK V EY+ G + L + + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
+ EYLH +++ DLKP N+L+D V DFG AK + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 195
Query: 708 IGLKGTVGYVAP 719
L GT Y+AP
Sbjct: 196 WXLCGTPEYLAP 207
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 101/236 (42%), Gaps = 39/236 (16%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
+ IG+GSFG +++GT + VA+K + ++ LR+ K
Sbjct: 11 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR---------SDAPQLRD--EYRTYK 59
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQS-DDQVEVC--KLSLIQRVNIAIDVA 649
++ C+ + F E + N + D L S +D +++C K S+ A +
Sbjct: 60 LLAGCTGI----PNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQML 115
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLL------DHDMVAHVCDFGLAKFLSDHQLDTAVKT 703
+ ++ +H + +V+ D+KP N L+ + +M+ +V DFG+ KF D +
Sbjct: 116 ARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMI-YVVDFGMVKFYRDPVTKQHIPY 171
Query: 704 PSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALP 759
L GT Y++ +G E S D ++A+ GH F + +LP
Sbjct: 172 REKK-NLSGTARYMSINTHLGREQSRRDD-------LEAL---GHVFMYFLRGSLP 216
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Query: 344 KNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFHGVI-PLSLSFLKSIKELNVSSN 402
+NL IL + SN +G+ + LE LD+S N+ V+ P + L + L++
Sbjct: 55 RNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRC 114
Query: 403 NLSGQIPEFLKNLSVLEFLSLSYNHFEGEVP--TKGVFSNKTKISLQGN 449
L P + L+ L++L L N+ + +P T N T + L GN
Sbjct: 115 GLQELGPGLFRGLAALQYLYLQDNNLQA-LPDNTFRDLGNLTHLFLHGN 162
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 101/236 (42%), Gaps = 39/236 (16%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
+ IG+GSFG +++GT + VA+K + ++ LR+ K
Sbjct: 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR---------SDAPQLRD--EYRTYK 60
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQS-DDQVEVC--KLSLIQRVNIAIDVA 649
++ C+ + F E + N + D L S +D +++C K S+ A +
Sbjct: 61 LLAGCTGI----PNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQML 116
Query: 650 SAMEYLHHHCQPPMVHGDLKPSNVLL------DHDMVAHVCDFGLAKFLSDHQLDTAVKT 703
+ ++ +H + +V+ D+KP N L+ + +M+ +V DFG+ KF D +
Sbjct: 117 ARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMI-YVVDFGMVKFYRDPVTKQHIPY 172
Query: 704 PSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALP 759
L GT Y++ +G E S D ++A+ GH F + +LP
Sbjct: 173 REKK-NLSGTARYMSINTHLGREQSRRDD-------LEAL---GHVFMYFLRGSLP 217
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 46 LRNLVSLNVAENK----FSGMFPRSICNISSLELIQLALNRFSGNLPFDIVVNLPNLKAL 101
LRNL+ L+++ F+G+F +SSLE++++A N F N DI L NL L
Sbjct: 125 LRNLIYLDISHTHTRVAFNGIFN----GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 180
Query: 102 AIGGNNFFGSIPYSLSNASNLELLDLSVNQF 132
+ P + ++ S+L++L++S N F
Sbjct: 181 DLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 211
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 7/115 (6%)
Query: 22 LSDLEVIRIMGNSLGGK-IPTTLGLLRNLVSLNVAENKFSGMFPRSICNISSLELIQLAL 80
LS LEV+++ GNS +P LRNL L++++ + + P + ++SSL+++ ++
Sbjct: 149 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSH 208
Query: 81 NRFSG--NLPFDIVVNLPNLKALAIGGNNFFGSIPYSLSN-ASNLELLDLSVNQF 132
N F P+ L +L+ L N+ S L + S+L L+L+ N F
Sbjct: 209 NNFFSLDTFPYKC---LNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 260
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 9/91 (9%)
Query: 343 LKNLVILDISSNQ----FSGVIPGTLSTCVCLEYLDISSNSFH-GVIPLSLSFLKSIKEL 397
L+NL+ LDIS F+G+ G S LE L ++ NSF +P + L+++ L
Sbjct: 125 LRNLIYLDISHTHTRVAFNGIFNGLSS----LEVLKMAGNSFQENFLPDIFTELRNLTFL 180
Query: 398 NVSSNNLSGQIPEFLKNLSVLEFLSLSYNHF 428
++S L P +LS L+ L++S+N+F
Sbjct: 181 DLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF 211
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 343 LKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNVSSN 402
L+NL LD+S Q + P ++ L+ L++S N+F + L S++ L+ S N
Sbjct: 174 LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLN 233
Query: 403 NLSGQIPEFLKNL-SVLEFLSLSYNHF 428
++ + L++ S L FL+L+ N F
Sbjct: 234 HIMTSKKQELQHFPSSLAFLNLTQNDF 260
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 86/201 (42%), Gaps = 25/201 (12%)
Query: 538 MIGQGSFGYVYKGTLGEDEMIVAVKVI--NLKYKGASRSFVA-ECEALRNIRHRNLIKII 594
+G+G F ++ + + + + A K++ +L K R ++ E R++ H++++
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
F+ DF V E SL + LH+ + + R + +Y
Sbjct: 88 GF-----FEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR-----QIVLGCQY 136
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
LH + ++H DLK N+ L+ D+ + DFGLA + + D K L GT
Sbjct: 137 LHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKK-----TLCGTP 185
Query: 715 GYVAPEYGMGSEASMTGDIFT 735
Y+APE S D+++
Sbjct: 186 NYIAPEVLSKKGHSFEVDVWS 206
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 86/201 (42%), Gaps = 25/201 (12%)
Query: 538 MIGQGSFGYVYKGTLGEDEMIVAVKVI--NLKYKGASRSFVA-ECEALRNIRHRNLIKII 594
+G+G F ++ + + + + A K++ +L K R ++ E R++ H++++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
F+ DF V E SL + LH+ + + R + +Y
Sbjct: 84 GF-----FEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR-----QIVLGCQY 132
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
LH + ++H DLK N+ L+ D+ + DFGLA + + D K L GT
Sbjct: 133 LHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKK-----TLCGTP 181
Query: 715 GYVAPEYGMGSEASMTGDIFT 735
Y+APE S D+++
Sbjct: 182 NYIAPEVLSKKGHSFEVDVWS 202
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 86/201 (42%), Gaps = 25/201 (12%)
Query: 538 MIGQGSFGYVYKGTLGEDEMIVAVKVI--NLKYKGASRSFVA-ECEALRNIRHRNLIKII 594
+G+G F ++ + + + + A K++ +L K R ++ E R++ H++++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
F+ DF V E SL + LH+ + + R + +Y
Sbjct: 84 GF-----FEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR-----QIVLGCQY 132
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
LH + ++H DLK N+ L+ D+ + DFGLA + + D K L GT
Sbjct: 133 LHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKK-----TLCGTP 181
Query: 715 GYVAPEYGMGSEASMTGDIFT 735
Y+APE S D+++
Sbjct: 182 NYIAPEVLSKKGHSFEVDVWS 202
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 23/200 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
IG GSFG +Y G VA+K+ +K K E + + ++ I I C
Sbjct: 17 IGSGSFGDIYLGANIASGEEVAIKLECVKTKHP--QLHIESKFYKMMQGGVGIPSIKWCG 74
Query: 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVC--KLSLIQRVNIAIDVASAMEYLH 656
+ D+ V E + SL+D + C K SL + +A + S +EY+H
Sbjct: 75 AE----GDYNVMVMELL-GPSLEDLFN-------FCSRKFSLKTVLLLADQMISRIEYIH 122
Query: 657 HHCQPPMVHGDLKPSNVLL---DHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGT 713
+H D+KP N L+ + ++ DFGLAK D + + + L GT
Sbjct: 123 ---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENK-NLTGT 178
Query: 714 VGYVAPEYGMGSEASMTGDI 733
Y + +G E S D+
Sbjct: 179 ARYASINTHLGIEQSRRDDL 198
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITIC 597
+G+G++G V E VAVK++++K + E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG-- 71
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + + EY G L D + E ++ + + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 122
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+ H D+KP N+LLD + DFGLA + + + + GT+ YV
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPYV 173
Query: 718 APE 720
APE
Sbjct: 174 APE 176
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 636 LSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDH 695
L+L + + VA ME+L +H DL N+LL V +CDFGLA+ + +
Sbjct: 188 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI--Y 242
Query: 696 QLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
+ V+ + + LK ++APE ++ D+++
Sbjct: 243 KDPDYVRKGDARLPLK----WMAPETIFDRVYTIQSDVWS 278
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITIC 597
+G+G++G V E VAVK++++K + E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + + EY G L D + E ++ + + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 122
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+ H D+KP N+LLD + DFGLA + + + + GT+ YV
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPYV 173
Query: 718 APE 720
APE
Sbjct: 174 APE 176
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 636 LSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDH 695
L+L + + VA ME+L +H DL N+LL V +CDFGLA+ + +
Sbjct: 190 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI--Y 244
Query: 696 QLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
+ V+ + + LK ++APE ++ D+++
Sbjct: 245 KDPDYVRKGDARLPLK----WMAPETIFDRVYTIQSDVWS 280
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITIC 597
+G+G++G V E VAVK++++K + E + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + + EY G L D + E ++ + + YLH
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 123
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+ H D+KP N+LLD + DFGLA + + + + GT+ YV
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPYV 174
Query: 718 APE 720
APE
Sbjct: 175 APE 177
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 636 LSLIQRVNIAIDVASAMEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSD 694
L+L + + VA ME+L C +H DL N+LL V +CDFGLA+ +
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDI-- 248
Query: 695 HQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
++ V+ + + LK ++APE ++ D+++
Sbjct: 249 YKDPDYVRKGDARLPLK----WMAPETIFDRVYTIQSDVWS 285
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITIC 597
+G+G++G V E VAVK++++K + E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + + EY G L D + E ++ + + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 122
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+ H D+KP N+LLD + DFGLA + + + + GT+ YV
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MXGTLPYV 173
Query: 718 APE 720
APE
Sbjct: 174 APE 176
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 636 LSLIQRVNIAIDVASAMEYL-HHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSD 694
L+L + + VA ME+L C +H DL N+LL V +CDFGLA+ +
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDI-- 250
Query: 695 HQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
++ V+ + + LK ++APE ++ D+++
Sbjct: 251 YKDPDYVRKGDARLPLK----WMAPETIFDRVYTIQSDVWS 287
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 74/187 (39%), Gaps = 31/187 (16%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEAL-RNIRHRNLIKIITIC 597
IG GS+ + M AVKVI+ + R E E L R +H N+I + +
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVID----KSKRDPSEEIEILLRYGQHPNIITLKDV- 89
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ V E M G L D + + S + + + +EYLH
Sbjct: 90 ----YDDGKHVYLVTELMRGGELLDKILRQK------FFSEREASFVLHTIGKTVEYLHS 139
Query: 658 HCQPPMVHGDLKPSNVLLDHD----MVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGT 713
+VH DLKPSN+L + +CDFG AK L + + TP T
Sbjct: 140 QG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAE--NGLLMTPCY------T 188
Query: 714 VGYVAPE 720
+VAPE
Sbjct: 189 ANFVAPE 195
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITIC 597
+G+G++G V E VAVK++++K + E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + + EY G L D + E ++ + + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 122
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+ H D+KP N+LLD + DFGLA + + + + GT+ YV
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MXGTLPYV 173
Query: 718 APE 720
APE
Sbjct: 174 APE 176
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 90/204 (44%), Gaps = 31/204 (15%)
Query: 533 FSSSNMIGQGSFGYVY--KGTLGEDE-MIVAVKVIN----LKYKGASRSFVAECEALRNI 585
F ++G G++G V+ + G D + A+KV+ ++ + E + L +I
Sbjct: 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 115
Query: 586 RHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIA 645
R + + T+ K + +Y+ G L L Q + E V I
Sbjct: 116 RQSPFLVTLHYAFQTETK----LHLILDYINGGELFTHLSQRERFTE-------HEVQIY 164
Query: 646 I-DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK-FLSDHQLDTAVKT 703
+ ++ A+E+LH + +++ D+K N+LLD + + DFGL+K F++D
Sbjct: 165 VGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADE-------- 213
Query: 704 PSSSIGLKGTVGYVAPEYGMGSEA 727
+ GT+ Y+AP+ G ++
Sbjct: 214 TERAYDFCGTIEYMAPDIVRGGDS 237
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 86/201 (42%), Gaps = 25/201 (12%)
Query: 538 MIGQGSFGYVYKGTLGEDEMIVAVKVI--NLKYKGASRSFVA-ECEALRNIRHRNLIKII 594
+G+G F ++ + + + + A K++ +L K R ++ E R++ H++++
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
F+ DF V E SL + LH+ + + R + +Y
Sbjct: 108 GF-----FEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR-----QIVLGCQY 156
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
LH + ++H DLK N+ L+ D+ + DFGLA + + D K L GT
Sbjct: 157 LHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKK-----VLCGTP 205
Query: 715 GYVAPEYGMGSEASMTGDIFT 735
Y+APE S D+++
Sbjct: 206 NYIAPEVLSKKGHSFEVDVWS 226
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 7/115 (6%)
Query: 22 LSDLEVIRIMGNSLGGK-IPTTLGLLRNLVSLNVAENKFSGMFPRSICNISSLELIQLAL 80
LS LEV+++ GNS +P LRNL L++++ + + P + ++SSL+++ ++
Sbjct: 468 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSH 527
Query: 81 NRFSG--NLPFDIVVNLPNLKALAIGGNNFFGSIPYSLSN-ASNLELLDLSVNQF 132
N F P+ L +L+ L N+ S L + S+L L+L+ N F
Sbjct: 528 NNFFSLDTFPYKC---LNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 579
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%)
Query: 46 LRNLVSLNVAENKFSGMFPRSICNISSLELIQLALNRFSGNLPFDIVVNLPNLKALAIGG 105
LRNL+ L+++ F +SSLE++++A N F N DI L NL L +
Sbjct: 444 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 503
Query: 106 NNFFGSIPYSLSNASNLELLDLSVNQF 132
P + ++ S+L++L++S N F
Sbjct: 504 CQLEQLSPTAFNSLSSLQVLNMSHNNF 530
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 343 LKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFH-GVIPLSLSFLKSIKELNVSS 401
L+NL+ LDIS G + LE L ++ NSF +P + L+++ L++S
Sbjct: 444 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 503
Query: 402 NNLSGQIPEFLKNLSVLEFLSLSYNHF 428
L P +LS L+ L++S+N+F
Sbjct: 504 CQLEQLSPTAFNSLSSLQVLNMSHNNF 530
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 343 LKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNVSSN 402
L+NL LD+S Q + P ++ L+ L++S N+F + L S++ L+ S N
Sbjct: 493 LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLN 552
Query: 403 NLSGQIPEFLKNL-SVLEFLSLSYNHF 428
++ + L++ S L FL+L+ N F
Sbjct: 553 HIMTSKKQELQHFPSSLAFLNLTQNDF 579
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 243 IGELKNLQKLCLFRNFLQG-RIPSGLGNLTKLANLELSSNSLQG 285
IG LK L++L + N +Q ++P NLT L +L+LSSN +Q
Sbjct: 144 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 187
Score = 33.9 bits (76), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 343 LKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNVSSN 402
L +L L ++ N + G S L+ L + + + LK++KELNV+ N
Sbjct: 99 LSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHN 158
Query: 403 NL-SGQIPEFLKNLSVLEFLSLSYNHFEG 430
+ S ++PE+ NL+ LE L LS N +
Sbjct: 159 LIQSFKLPEYFSNLTNLEHLDLSSNKIQS 187
Score = 30.0 bits (66), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 340 VGHLKNLVILDISSNQFSGV-IPGTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSI 394
+GHLK L L+++ N +P S LE+LD+SSN + L L +
Sbjct: 144 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 199
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 86/201 (42%), Gaps = 25/201 (12%)
Query: 538 MIGQGSFGYVYKGTLGEDEMIVAVKVI--NLKYKGASRSFVA-ECEALRNIRHRNLIKII 594
+G+G F ++ + + + + A K++ +L K R ++ E R++ H++++
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
F+ DF V E SL + LH+ + + R + +Y
Sbjct: 106 GF-----FEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR-----QIVLGCQY 154
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
LH + ++H DLK N+ L+ D+ + DFGLA + + D K L GT
Sbjct: 155 LHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKK-----VLCGTP 203
Query: 715 GYVAPEYGMGSEASMTGDIFT 735
Y+APE S D+++
Sbjct: 204 NYIAPEVLSKKGHSFEVDVWS 224
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 67/158 (42%), Gaps = 24/158 (15%)
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQ--SDDQVEVCKLSLIQRVNIAI 646
N+IK+I K A VFEY+ N K L+Q +D + L++
Sbjct: 94 NIIKLIDTVKDPVSKTP---ALVFEYINNTDFKQ-LYQILTDFDIRFYMYELLK------ 143
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVA-HVCDFGLAKFLSDHQLDTAVKTPS 705
A++Y H ++H D+KP NV++DH + D+GLA+F Q + V+ S
Sbjct: 144 ----ALDYCH---SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQ-EYNVRVAS 195
Query: 706 SSI-GLKGTVGYVAPEYG--MGSEASMTGDIFTGRRPI 740
G + V Y +Y M S M + R P
Sbjct: 196 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPF 233
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITIC 597
+G+G++G V E VAVK++++K + E + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + + EY G L D + E ++ + + YLH
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 123
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+ H D+KP N+LLD + DFGLA + + + + GT+ YV
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPYV 174
Query: 718 APE 720
APE
Sbjct: 175 APE 177
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITIC 597
+G+G++G V E VAVK++++K + E + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + + EY G L D + E ++ + + YLH
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 123
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+ H D+KP N+LLD + DFGLA + + + + GT+ YV
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPYV 174
Query: 718 APE 720
APE
Sbjct: 175 APE 177
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITIC 597
+G+G++G V E VAVK++++K + E + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + + EY G L D + E ++ + + YLH
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 123
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+ H D+KP N+LLD + DFGLA + + + + GT+ YV
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPYV 174
Query: 718 APE 720
APE
Sbjct: 175 APE 177
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 74/187 (39%), Gaps = 31/187 (16%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEAL-RNIRHRNLIKIITIC 597
IG GS+ + M AVKVI+ + R E E L R +H N+I + +
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVID----KSKRDPSEEIEILLRYGQHPNIITLKDV- 89
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ V E M G L D + + S + + + +EYLH
Sbjct: 90 ----YDDGKHVYLVTELMRGGELLDKILRQK------FFSEREASFVLHTIGKTVEYLHS 139
Query: 658 HCQPPMVHGDLKPSNVLLDHD----MVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGT 713
+VH DLKPSN+L + +CDFG AK L + + TP T
Sbjct: 140 QG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAE--NGLLMTPCY------T 188
Query: 714 VGYVAPE 720
+VAPE
Sbjct: 189 ANFVAPE 195
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%)
Query: 46 LRNLVSLNVAENKFSGMFPRSICNISSLELIQLALNRFSGNLPFDIVVNLPNLKALAIGG 105
LRNL+ L+++ F +SSLE++++A N F N DI L NL L +
Sbjct: 420 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 479
Query: 106 NNFFGSIPYSLSNASNLELLDLSVNQF 132
P + ++ S+L++L++S N F
Sbjct: 480 CQLEQLSPTAFNSLSSLQVLNMSHNNF 506
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 7/115 (6%)
Query: 22 LSDLEVIRIMGNSLGGK-IPTTLGLLRNLVSLNVAENKFSGMFPRSICNISSLELIQLAL 80
LS LEV+++ GNS +P LRNL L++++ + + P + ++SSL+++ ++
Sbjct: 444 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSH 503
Query: 81 NRFSG--NLPFDIVVNLPNLKALAIGGNNFFGSIPYSLSN-ASNLELLDLSVNQF 132
N F P+ L +L+ L N+ S L + S+L L+L+ N F
Sbjct: 504 NNFFSLDTFPYKC---LNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 555
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 343 LKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFH-GVIPLSLSFLKSIKELNVSS 401
L+NL+ LDIS G + LE L ++ NSF +P + L+++ L++S
Sbjct: 420 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 479
Query: 402 NNLSGQIPEFLKNLSVLEFLSLSYNHF 428
L P +LS L+ L++S+N+F
Sbjct: 480 CQLEQLSPTAFNSLSSLQVLNMSHNNF 506
Score = 36.2 bits (82), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 343 LKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNVSSN 402
L+NL LD+S Q + P ++ L+ L++S N+F + L S++ L+ S N
Sbjct: 469 LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLN 528
Query: 403 NLSGQIPEFLKNL-SVLEFLSLSYNHF 428
++ + L++ S L FL+L+ N F
Sbjct: 529 HIMTSKKQELQHFPSSLAFLNLTQNDF 555
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 243 IGELKNLQKLCLFRNFLQG-RIPSGLGNLTKLANLELSSNSLQG 285
IG LK L++L + N +Q ++P NLT L +L+LSSN +Q
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 343 LKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNVSSN 402
L +L L ++ N + G S L+ L + + + LK++KELNV+ N
Sbjct: 75 LSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHN 134
Query: 403 NL-SGQIPEFLKNLSVLEFLSLSYNHFEG 430
+ S ++PE+ NL+ LE L LS N +
Sbjct: 135 LIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
Score = 30.0 bits (66), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 340 VGHLKNLVILDISSNQFSGV-IPGTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSI 394
+GHLK L L+++ N +P S LE+LD+SSN + L L +
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 38.1 bits (87), Expect = 0.020, Method: Composition-based stats.
Identities = 43/183 (23%), Positives = 72/183 (39%), Gaps = 21/183 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITIC 597
+G+G++G V E VAVK++++K + E + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYG-- 72
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + + EY G L D + E ++ + + YLH
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLH- 122
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+ H D+KP N+LLD + DFGLA + + + + GT+ YV
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPYV 174
Query: 718 APE 720
APE
Sbjct: 175 APE 177
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 67/158 (42%), Gaps = 24/158 (15%)
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQ--SDDQVEVCKLSLIQRVNIAI 646
N+IK+I K A VFEY+ N K L+Q +D + L++
Sbjct: 99 NIIKLIDTVKDPVSKTP---ALVFEYINNTDFKQ-LYQILTDFDIRFYMYELLK------ 148
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVA-HVCDFGLAKFLSDHQLDTAVKTPS 705
A++Y H ++H D+KP NV++DH + D+GLA+F Q + V+ S
Sbjct: 149 ----ALDYCH---SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQ-EYNVRVAS 200
Query: 706 SSI-GLKGTVGYVAPEYG--MGSEASMTGDIFTGRRPI 740
G + V Y +Y M S M + R P
Sbjct: 201 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPF 238
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 86/201 (42%), Gaps = 25/201 (12%)
Query: 538 MIGQGSFGYVYKGTLGEDEMIVAVKVI--NLKYKGASRSFVA-ECEALRNIRHRNLIKII 594
+G+G F ++ + + + + A K++ +L K R ++ E R++ H++++
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 595 TICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEY 654
F+ DF V E SL + LH+ + + R + +Y
Sbjct: 82 GF-----FEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLR-----QIVLGCQY 130
Query: 655 LHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTV 714
LH + ++H DLK N+ L+ D+ + DFGLA + + D K L GT
Sbjct: 131 LHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKK-----VLCGTP 179
Query: 715 GYVAPEYGMGSEASMTGDIFT 735
Y+APE S D+++
Sbjct: 180 NYIAPEVLSKKGHSFEVDVWS 200
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 92/227 (40%), Gaps = 22/227 (9%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+G+G F YV D A+K I + E + R H N+++++ C
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCL 96
Query: 599 STDFKGTDFKAFVF-EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+G +A++ + + G+L + + + D+ L+ Q + + + + +E +H
Sbjct: 97 RE--RGAKHEAWLLLPFFKRGTLWNEIERLKDKGNF--LTEDQILWLLLGICRGLEAIH- 151
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDH-QLDTAVKTPSSSIGLKGTVGY 716
H DLKP+N+LL + + D G H + T + T+ Y
Sbjct: 152 --AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISY 209
Query: 717 VAPE-YGMGSEASM--TGDIFT----------GRRPIDAVFNEGHSL 750
APE + + S + D+++ G P D VF +G S+
Sbjct: 210 RAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSV 256
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITIC 597
+G+G++G V E VAVK++++K + E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + + EY G L D + E ++ + + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 122
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+ H D+KP N+LLD + DFGLA + + + + GT+ YV
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPYV 173
Query: 718 APE 720
APE
Sbjct: 174 APE 176
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITIC 597
+G+G++G V E VAVK++++K + E + + H N++K
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 70
Query: 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH 657
+ + + EY G L D + E ++ + + YLH
Sbjct: 71 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL------MAGVVYLHG 121
Query: 658 HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYV 717
+ H D+KP N+LLD + DFGLA + + + + GT+ YV
Sbjct: 122 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK------MCGTLPYV 172
Query: 718 APE 720
APE
Sbjct: 173 APE 175
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 91/225 (40%), Gaps = 9/225 (4%)
Query: 206 IGRNQISGTIPPGIRNLVNLIGFGAEENQLHGTIPDAIGELKNLQKLCLFRNFLQGRIP- 264
+G+N+I + +L EN + P A L NL+ L L N L+ IP
Sbjct: 39 LGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK-LIPL 97
Query: 265 ---SGLGNLTKLANLELSSNSLQGNIPSSLGNCQNLMSFTASQNKLTGALPHQLLSITTX 321
+GL NLTKL ++S N + + + NL S N L + H+ S
Sbjct: 98 GVFTGLSNLTKL---DISENKIVILLDYMFQDLYNLKSLEVGDNDLV-YISHRAFSGLNS 153
Query: 322 XXXXXXXXXXXXXXXXXQVGHLKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFH 381
+ HL L++L + + + + L+ L+IS +
Sbjct: 154 LEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYL 213
Query: 382 GVIPLSLSFLKSIKELNVSSNNLSGQIPEFLKNLSVLEFLSLSYN 426
+ + + ++ L+++ NL+ +++L L FL+LSYN
Sbjct: 214 DTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYN 258
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 75/193 (38%), Gaps = 30/193 (15%)
Query: 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN----LKYKGASRSFVAECEALRNIRH 587
+F +G GSFG V E A+K+++ +K K + + E L+ +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 588 RNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAID 647
L+K+ FK V EY+ G + L + + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 648 VASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707
+ EYLH +++ DLKP N+L+D V DFG AK + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 195
Query: 708 IGLKGTVGYVAPE 720
L GT +APE
Sbjct: 196 WXLCGTPEALAPE 208
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 93/237 (39%), Gaps = 43/237 (18%)
Query: 512 SPMEKQFPMVSYAELS-KATGEFSSSNMIGQGSFGYV---YKGTLGEDEMIVAVKVINLK 567
S M+ QF V A+ + + IG G+ G V + LG IN+
Sbjct: 2 SHMDSQFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLG----------INVA 51
Query: 568 YKGASRSFVAECEALRNIR---------HRNLIKIITICSSTDFKGTDFKAFVFEYMENG 618
K SR F + A R R H+N+I ++ + + ++ + +
Sbjct: 52 VKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA 111
Query: 619 SLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHD 678
+L +H D + L L Q + +++LH ++H DLKPSN+++ D
Sbjct: 112 NLCQVIHMELDHERMSYL-LYQML-------CGIKHLH---SAGIIHRDLKPSNIVVKSD 160
Query: 679 MVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
+ DFGLA+ S + + T T Y APE +G DI++
Sbjct: 161 CTLKILDFGLARTASTNFMMTPYVV---------TRYYRAPEVILGMGYKENVDIWS 208
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 35/189 (18%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAE---CEALRNIRHRNLIKIIT 595
+G+GSF K + AVK+I+ + + ++ + CE H N++K+
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEG-----HPNIVKLHE 73
Query: 596 ICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYL 655
+ F V E + G L + + + E + S I R + SA+ ++
Sbjct: 74 V-----FHDQLHTFLVMELLNGGELFERIKKKKHFSET-EASYIMR-----KLVSAVSHM 122
Query: 656 HHHCQPPMVHGDLKPSNVLL---DHDMVAHVCDFGLAKFL-SDHQLDTAVKTPSSSIGLK 711
H +VH DLKP N+L + ++ + DFG A+ D+Q +KTP
Sbjct: 123 H---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ---PLKTPCF----- 171
Query: 712 GTVGYVAPE 720
T+ Y APE
Sbjct: 172 -TLHYAAPE 179
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRN- 589
G + +G G F V+ + + VA+KV+ + + + + E L+++R+ +
Sbjct: 21 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVK-SAEHYTETALDEIRLLKSVRNSDP 79
Query: 590 -------LIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRV 642
+++++ + GT VFE + + LK W+ +S+ Q L L
Sbjct: 80 NDPNREMVVQLLDDFKISGVNGTHI-CMVFEVLGHHLLK-WIIKSNYQ----GLPLPCVK 133
Query: 643 NIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLL 675
I V ++YLH C+ ++H D+KP N+LL
Sbjct: 134 KIIQQVLQGLDYLHTKCR--IIHTDIKPENILL 164
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 86/213 (40%), Gaps = 34/213 (15%)
Query: 524 AELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAE---CE 580
AEL ++ I GS+G V G E + +V N G + + +++ C+
Sbjct: 15 AELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCK 74
Query: 581 -ALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSL-KDWLHQSDDQVEVCKLSL 638
LR IR N I D +F + E ++ K +L + ++ ++
Sbjct: 75 RVLREIRLLNHFHHPNILGLRD---------IFVHFEEPAMHKLYLVTELMRTDLAQVIH 125
Query: 639 IQRVNIAIDVASAMEYLHHHC--------QPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690
QR+ I+ ++Y +H + +VH DL P N+LL + +CDF LA+
Sbjct: 126 DQRIVIS---PQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR 182
Query: 691 FLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGM 723
DTA + + + Y APE M
Sbjct: 183 ------EDTADANKTHYVTHR---WYRAPELVM 206
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 83/205 (40%), Gaps = 41/205 (20%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICS 598
+G+G++G+VYK + + + ++ G S S E LR ++H N+I + +
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 599 STDFKGTDFKAFV-FEYMENGSLKDWLHQSDDQVEVCKLSLIQRVN-------------I 644
S D K ++ F+Y E+ D + K + N +
Sbjct: 89 SH----ADRKVWLLFDYAEH-----------DLWHIIKFHRASKANKKPVQLPRGMVKSL 133
Query: 645 AIDVASAMEYLHHHCQPPMVHGDLKPSNVLL----DHDMVAHVCDFGLAKFLSDHQLDTA 700
+ + YLH + ++H DLKP+N+L+ + D G A+ ++
Sbjct: 134 LYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARL-----FNSP 185
Query: 701 VKTPSSSIGLKGTVGYVAPEYGMGS 725
+K + + T Y APE +G+
Sbjct: 186 LKPLADLDPVVVTFWYRAPELLLGA 210
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 86/213 (40%), Gaps = 34/213 (15%)
Query: 524 AELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAE---CE 580
AEL ++ I GS+G V G E + +V N G + + +++ C+
Sbjct: 15 AELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCK 74
Query: 581 -ALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSL-KDWLHQSDDQVEVCKLSL 638
LR IR N I D +F + E ++ K +L + ++ ++
Sbjct: 75 RVLREIRLLNHFHHPNILGLRD---------IFVHFEEPAMHKLYLVTELMRTDLAQVIH 125
Query: 639 IQRVNIAIDVASAMEYLHHHC--------QPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690
QR+ I+ ++Y +H + +VH DL P N+LL + +CDF LA+
Sbjct: 126 DQRIVIS---PQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR 182
Query: 691 FLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGM 723
DTA + + + Y APE M
Sbjct: 183 ------EDTADANKTHYVTHR---WYRAPELVM 206
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 79/199 (39%), Gaps = 31/199 (15%)
Query: 250 QKLCLFRNFLQGRIPSGLGNLTKLANLELSSNSLQGNIPSSL-GNCQNLMSFTASQNKLT 308
+KL L N L LTKL L L+ N LQ +P+ + +NL + + NKL
Sbjct: 40 KKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQ 98
Query: 309 GALPHQLLSITTXXXXXXXXXXXXXXXXXXQVGHLKNLVILDISSNQFSGVIPGTLSTCV 368
ALP + L NL L + NQ + P +
Sbjct: 99 -ALPIGVFD------------------------QLVNLAELRLDRNQLKSLPPRVFDSLT 133
Query: 369 CLEYLDISSNSFHGVIPLSLSFLKSIKELNVSSNNLSGQIPE-FLKNLSVLEFLSLSYNH 427
L YL + N + L S+KEL + +N L ++PE L+ L+ L L N
Sbjct: 134 KLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLK-RVPEGAFDKLTELKTLKLDNNQ 192
Query: 428 FEGEVPTKGVFSNKTKISL 446
+ VP +G F + K+ +
Sbjct: 193 LK-RVP-EGAFDSLEKLKM 209
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 78/208 (37%), Gaps = 9/208 (4%)
Query: 195 ANLSSTVINFGIGRNQISGTIPPGIRNLVNLIGFGAEENQLHGTIPDAI-GELKNLQKLC 253
+N+ + + N++S L L +N+L T+P I ELKNL+ L
Sbjct: 33 SNIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLW 91
Query: 254 LFRNFLQGRIPSGL-GNLTKLANLELSSNSLQGNIPSSLGNCQNLMSFTASQNKLTGALP 312
+ N LQ +P G+ L LA L L N L+ P + L + N+L +LP
Sbjct: 92 VTDNKLQA-LPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLP 149
Query: 313 HQLLSITTXXXXXXXXXXXXXXXXXXQVGHLKNLVILDISSNQFSGVIPGTLSTCVCLEY 372
+ T L L L + +NQ V G + L+
Sbjct: 150 KGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKM 209
Query: 373 LDISSNSF----HGVIPLSLSFLKSIKE 396
L + N + +G+I ++ K E
Sbjct: 210 LQLQENPWDCTCNGIIYMAKWLKKKADE 237
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Query: 174 SSLKALSLADNQFGGELPHSIANLSSTVINFGIGRNQISGTIPPGIRNLVNLIGFGAEEN 233
+L+ L + DN+ LP + + + + RNQ+ P +L L N
Sbjct: 85 KNLETLWVTDNKLQA-LPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYN 143
Query: 234 QLHGTIPDAIGELKNLQKLCLFRNFLQGRIPSG-LGNLTKLANLELSSNSLQ 284
+L +L +L++L L+ N L+ R+P G LT+L L+L +N L+
Sbjct: 144 ELQSLPKGVFDKLTSLKELRLYNNQLK-RVPEGAFDKLTELKTLKLDNNQLK 194
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 36.6 bits (83), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N++K++ I K + +FEY+ N +D +V L+ ++
Sbjct: 108 NIVKLLDIVRDQHSKTP---SLIFEYVNN---------TDFKVLYPTLTDYDIRYYIYEL 155
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVA-HVCDFGLAKF 691
A++Y H ++H D+KP NV++DH++ + D+GLA+F
Sbjct: 156 LKALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 196
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG---ASRSFVAECEALRNIRHRN 589
+ S +G G++G V VA+K ++ ++ A R++ E L++++H N
Sbjct: 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAY-RELLLLKHMQHEN 84
Query: 590 LIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQ-VEVCKLSLIQRVNIAIDV 648
+I ++ + + + + F Y+ + Q+D Q + K S + + +
Sbjct: 85 VIGLLDVFTP----ASSLRNFYDFYLVMPFM-----QTDLQKIMGLKFSEEKIQYLVYQM 135
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690
++Y+H +VH DLKP N+ ++ D + DFGLA+
Sbjct: 136 LKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR 174
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 16/104 (15%)
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N++K++ I K + +FEY+ N K V L+ ++
Sbjct: 87 NIVKLLDIVRDQHSKTP---SLIFEYVNNTDFK---------VLYPTLTDYDIRYYIYEL 134
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVA-HVCDFGLAKF 691
A++Y H ++H D+KP NV++DH++ + D+GLA+F
Sbjct: 135 LKALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 16/104 (15%)
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N++K++ I K + +FEY+ N K V L+ ++
Sbjct: 88 NIVKLLDIVRDQHSKTP---SLIFEYVNNTDFK---------VLYPTLTDYDIRYYIYEL 135
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVA-HVCDFGLAKF 691
A++Y H ++H D+KP NV++DH++ + D+GLA+F
Sbjct: 136 LKALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 176
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 73/155 (47%), Gaps = 21/155 (13%)
Query: 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRN- 589
G + +G G F V+ + + VA+KV+ + + + + E L+++R+ +
Sbjct: 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVK-SAEHYTETALDEIRLLKSVRNSDP 95
Query: 590 -------LIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQ--VEVCKLSLIQ 640
+++++ + GT VFE + + LK W+ +S+ Q C +IQ
Sbjct: 96 NDPNREMVVQLLDDFKISGVNGTHI-CMVFEVLGHHLLK-WIIKSNYQGLPLPCVKKIIQ 153
Query: 641 RVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLL 675
+V ++YLH C+ ++H D+KP N+LL
Sbjct: 154 QV------LQGLDYLHTKCR--IIHTDIKPENILL 180
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 16/104 (15%)
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N++K++ I K + +FEY+ N K V L+ ++
Sbjct: 87 NIVKLLDIVRDQHSKTP---SLIFEYVNNTDFK---------VLYPTLTDYDIRYYIYEL 134
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVA-HVCDFGLAKF 691
A++Y H ++H D+KP NV++DH++ + D+GLA+F
Sbjct: 135 LKALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 36.6 bits (83), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 16/104 (15%)
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N++K++ I K + +FEY+ N K V L+ ++
Sbjct: 87 NIVKLLDIVRDQHSKTP---SLIFEYVNNTDFK---------VLYPTLTDYDIRYYIYEL 134
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVA-HVCDFGLAKF 691
A++Y H ++H D+KP NV++DH++ + D+GLA+F
Sbjct: 135 LKALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 36.6 bits (83), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 4/109 (3%)
Query: 344 KNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNS-FHGVIPLSLSFLKSIKELNVSSN 402
+NL IL + SN + + + LE LD+S N+ V P + L + L++
Sbjct: 55 RNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRC 114
Query: 403 NLSGQIPEFLKNLSVLEFLSLSYNHFEGEVP--TKGVFSNKTKISLQGN 449
L P + L+ L++L L N + +P T N T + L GN
Sbjct: 115 GLQELGPGLFRGLAALQYLYLQDNALQA-LPDDTFRDLGNLTHLFLHGN 162
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 36.6 bits (83), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 37/166 (22%)
Query: 539 IGQGSFGYV---YKGTLGEDEMIVAVKVINLKYKG---ASRSFVAECEALRNIRHRNLIK 592
IG G+ G V Y L + VA+K ++ ++ A R++ E ++ + H+N+I
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIIS 87
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAM 652
++ + + E ++ L +E+ +L Q + + +D M
Sbjct: 88 LLNVFTPQK---------TLEEFQDVYL---------VMELMDANLXQVIQMELD-HERM 128
Query: 653 EYL--------HHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690
YL H ++H DLKPSN+++ D + DFGLA+
Sbjct: 129 SYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 36.6 bits (83), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 77/196 (39%), Gaps = 37/196 (18%)
Query: 95 LPNLKALAIGGNNFFGSIPYSLSNASNLELLDLSVNQFKGNVSIDFSSXXXXXXXXXXXX 154
LPN++ LA+GGN +L +NL L L+ NQ + + F
Sbjct: 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDK------------ 107
Query: 155 XXGTGTATDLDFVTFLTNCSSLKALSLADNQFGGELPHSIANLSSTVINFGIGRNQISGT 214
LTN LK L L +NQ LP + + + + + NQ+ +
Sbjct: 108 ---------------LTN---LKELVLVENQLQS-LPDGVFDKLTNLTYLNLAHNQLQ-S 147
Query: 215 IPPGI-RNLVNLIGFGAEENQLHGTIPDAIGELKNLQKLCLFRNFLQGRIPSGL-GNLTK 272
+P G+ L NL NQL +L L+ L L++N L+ +P G+ LT
Sbjct: 148 LPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKS-VPDGVFDRLTS 206
Query: 273 LANLELSSNSLQGNIP 288
L + L N P
Sbjct: 207 LQYIWLHDNPWDCTCP 222
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 58/169 (34%), Gaps = 27/169 (15%)
Query: 218 GIRNLVNLIGFGAEENQLHGTIPDAIGELKNLQKLCLFRNFLQGRIPSGL-GNLTKLANL 276
++ L NL NQL +L NL++L L N LQ +P G+ LT L L
Sbjct: 80 ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQS-LPDGVFDKLTNLTYL 138
Query: 277 ELSSNSLQGNIPSSLGNCQNLMSFTASQNKLTGALPHQLLSITTXXXXXXXXXXXXXXXX 336
L+ N LQ NL S N+L +LP +
Sbjct: 139 NLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ-SLPEGVFD------------------- 178
Query: 337 XXQVGHLKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFHGVIP 385
L L L + NQ V G L+Y+ + N + P
Sbjct: 179 -----KLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222
Score = 33.1 bits (74), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 75/217 (34%), Gaps = 53/217 (24%)
Query: 218 GIRNLVNLIGFGAEENQLHGTIPDAIGELKNLQKLCLFRNFLQGRIPSGL-GNLTKLANL 276
GI+ L N+ N+LH A+ EL NL L L N LQ +P+G+ LT L L
Sbjct: 58 GIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQS-LPNGVFDKLTNLKEL 114
Query: 277 ELSSNSLQGNIPSSLGNCQNLMSFTASQNKLTGALPHQLLSITTXXXXXXXXXXXXXXXX 336
L N LQ +LP +
Sbjct: 115 VLVENQLQ-------------------------SLPDGVFD------------------- 130
Query: 337 XXQVGHLKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKE 396
L NL L+++ NQ + G L LD+S N + L +K+
Sbjct: 131 -----KLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKD 185
Query: 397 LNVSSNNLSGQIPEFLKNLSVLEFLSLSYNHFEGEVP 433
L + N L L+ L+++ L N ++ P
Sbjct: 186 LRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 36.6 bits (83), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 4/109 (3%)
Query: 344 KNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNS-FHGVIPLSLSFLKSIKELNVSSN 402
+NL IL + SN + + + LE LD+S N+ V P + L + L++
Sbjct: 56 RNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRC 115
Query: 403 NLSGQIPEFLKNLSVLEFLSLSYNHFEGEVP--TKGVFSNKTKISLQGN 449
L P + L+ L++L L N + +P T N T + L GN
Sbjct: 116 GLQELGPGLFRGLAALQYLYLQDNALQA-LPDDTFRDLGNLTHLFLHGN 163
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 36.6 bits (83), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 16/104 (15%)
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N++K++ I K + +FEY+ N K V L+ ++
Sbjct: 89 NIVKLLDIVRDQHSKTP---SLIFEYVNNTDFK---------VLYPTLTDYDIRYYIYEL 136
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVA-HVCDFGLAKF 691
A++Y H ++H D+KP NV++DH++ + D+GLA+F
Sbjct: 137 LKALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 177
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 16/104 (15%)
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N++K++ I K + +FEY+ N K V L+ ++
Sbjct: 88 NIVKLLDIVRDQHSKTP---SLIFEYVNNTDFK---------VLYPTLTDYDIRYYIYEL 135
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVA-HVCDFGLAKF 691
A++Y H ++H D+KP NV++DH++ + D+GLA+F
Sbjct: 136 LKALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 176
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 7/51 (13%)
Query: 642 VNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDH---DMVAHVCDFGLA 689
+ +++ + +EY+H H VHGD+K SN+LL++ D V ++ D+GLA
Sbjct: 155 LQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPDQV-YLVDYGLA 201
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 7/51 (13%)
Query: 642 VNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDH---DMVAHVCDFGLA 689
+ +++ + +EY+H H VHGD+K SN+LL++ D V ++ D+GLA
Sbjct: 155 LQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPDQV-YLVDYGLA 201
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 16/104 (15%)
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N++K++ I K + +FEY+ N K V L+ ++
Sbjct: 87 NIVKLLDIVRDQHSKTP---SLIFEYVNNTDFK---------VLYPTLTDYDIRYYIYEL 134
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVA-HVCDFGLAKF 691
A++Y H ++H D+KP NV++DH++ + D+GLA+F
Sbjct: 135 LKALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
>pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ1|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ2|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
pdb|3VQ2|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
Length = 606
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 192 HSIANLSSTVINFGIGRNQISGTIPPGIRNLVNLIGFGAEENQLHGTIPDAIGELKNLQK 251
H + +LS N + N I P L +L A E +L IG+L L+K
Sbjct: 77 HGLHHLS----NLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKK 132
Query: 252 LCLFRNFLQG-RIPSGLGNLTKLANLELSSNSLQ 284
L + NF+ ++P+ NLT L +++LS N +Q
Sbjct: 133 LNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQ 166
Score = 34.3 bits (77), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 340 VGHLKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNV 399
+ HL NL++ + N PG+ S LE L + + L ++K+LNV
Sbjct: 79 LHHLSNLIL---TGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNV 135
Query: 400 SSNNL-SGQIPEFLKNLSVLEFLSLSYNHFE 429
+ N + S ++P + NL+ L + LSYN+ +
Sbjct: 136 AHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQ 166
>pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex
Length = 599
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 192 HSIANLSSTVINFGIGRNQISGTIPPGIRNLVNLIGFGAEENQLHGTIPDAIGELKNLQK 251
H + +LS N + N I P L +L A E +L IG+L L+K
Sbjct: 72 HGLHHLS----NLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKK 127
Query: 252 LCLFRNFLQG-RIPSGLGNLTKLANLELSSNSLQ 284
L + NF+ ++P+ NLT L +++LS N +Q
Sbjct: 128 LNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQ 161
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 340 VGHLKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNV 399
+ HL NL++ + N PG+ S LE L + + L ++K+LNV
Sbjct: 74 LHHLSNLIL---TGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNV 130
Query: 400 SSNNL-SGQIPEFLKNLSVLEFLSLSYNHFE 429
+ N + S ++P + NL+ L + LSYN+ +
Sbjct: 131 AHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQ 161
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 16/104 (15%)
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N++K++ I K + +FEY+ N K V L+ ++
Sbjct: 87 NIVKLLDIVRDQHSKTP---SLIFEYVNNTDFK---------VLYPTLTDYDIRYYIYEL 134
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVA-HVCDFGLAKF 691
A++Y H ++H D+KP NV++DH++ + D+GLA+F
Sbjct: 135 LKALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 36.2 bits (82), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 344 KNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNVSSNN 403
+++++L++SSN +G + L V + LD+ +N IP ++ L++++ELNV+SN
Sbjct: 428 ESILVLNLSSNMLTGSVFRCLPPKV--KVLDLHNNRIMS-IPKDVTHLQALQELNVASNQ 484
Query: 404 LSGQIPEFLKNLSVLEFLSLSYNHFEGEVP 433
L L+ L+++ L N ++ P
Sbjct: 485 LKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514
Score = 35.8 bits (81), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 61/157 (38%), Gaps = 7/157 (4%)
Query: 232 ENQLHGTIPDAIGELKNLQKLCLFRNFLQGRIPSGL--GNLTKLANLELSSNSLQGN-IP 288
+N ++ LK LQ L L RN L+ L N++ L L++S NSL +
Sbjct: 362 QNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYD 421
Query: 289 SSLGNCQNLMSFTASQNKLTGALPHQLLSITTXXXXXXXXXXXXXXXXXXQVGHLKNLVI 348
+ ++++ S N LTG++ V HL+ L
Sbjct: 422 RTCAWAESILVLNLSSNMLTGSV----FRCLPPKVKVLDLHNNRIMSIPKDVTHLQALQE 477
Query: 349 LDISSNQFSGVIPGTLSTCVCLEYLDISSNSFHGVIP 385
L+++SNQ V G L+Y+ + N + P
Sbjct: 478 LNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 36.2 bits (82), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 78/164 (47%), Gaps = 21/164 (12%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG---ASRSFVAECEALRNIRHRN 589
+ S +G G++G V VA+K ++ ++ A R++ E L++++H N
Sbjct: 44 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAY-RELLLLKHMQHEN 102
Query: 590 LIKIITICS--STDFKGTDFKAFVFEYMENGSLKDW-LHQSDDQVEVCKLSLIQRVNIAI 646
+I ++ + + S+ DF V +M+ K + S+++++ +++
Sbjct: 103 VIGLLDVFTPASSLRNFYDF-YLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLK------ 155
Query: 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690
++Y+H +VH DLKP N+ ++ D + DFGLA+
Sbjct: 156 ----GLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR 192
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 36.2 bits (82), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 7/51 (13%)
Query: 642 VNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDH---DMVAHVCDFGLA 689
+ +++ + +EY+H H VHGD+K SN+LL++ D V ++ D+GLA
Sbjct: 155 LQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPDQV-YLVDYGLA 201
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 36.2 bits (82), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 37/166 (22%)
Query: 539 IGQGSFGYV---YKGTLGEDEMIVAVKVINLKYKG---ASRSFVAECEALRNIRHRNLIK 592
IG G+ G V Y L + VA+K ++ ++ A R++ E ++ + H+N+I
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIIS 87
Query: 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAM 652
++ + + E ++ L +E+ +L Q + + +D M
Sbjct: 88 LLNVFTPQK---------TLEEFQDVYL---------VMELMDANLXQVIQMELD-HERM 128
Query: 653 EYL--------HHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690
YL H ++H DLKPSN+++ D + DFGLA+
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 36.2 bits (82), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 16/104 (15%)
Query: 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648
N++K++ I K + +FEY+ N K V L+ ++
Sbjct: 87 NIVKLLDIVRDQHSKTP---SLIFEYVNNTDFK---------VLYPTLTDYDIRYYIYEL 134
Query: 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVA-HVCDFGLAKF 691
A++Y H ++H D+KP NV++DH++ + D+GLA+F
Sbjct: 135 LKALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 36.2 bits (82), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 73/179 (40%), Gaps = 58/179 (32%)
Query: 218 GIRNLVNLIGFGAEENQLHGTIPDAIGELKNLQKLCLFRNFLQGRIPSGLGNLTKLANLE 277
GI+ L NLIG ++NQ+ P L NLTK+ LE
Sbjct: 64 GIQYLNNLIGLELKDNQITDLTP--------------------------LKNLTKITELE 97
Query: 278 LSSNSLQGNIPSSLGNCQNLMSFTASQNKLTGALPHQLLSITTXXXXXXXXXXXXXXXXX 337
LS N L+ N+ S++ Q++ + + ++T P
Sbjct: 98 LSGNPLK-NV-SAIAGLQSIKTLDLTSTQITDVTP------------------------- 130
Query: 338 XQVGHLKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFHGVIPLS-LSFLKSIK 395
+ L NL +L + NQ + + P L+ L+YL I +N + + PL+ LS L +++
Sbjct: 131 --LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNNQVNDLTPLANLSKLTTLR 185
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 35.8 bits (81), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 120/316 (37%), Gaps = 72/316 (22%)
Query: 164 LDFVTFLTNCSSLKALSL---ADNQFGGELPHSIANLSSTVINFGIGRNQISGT------ 214
LDF F + +SLKALS+ + FG P S + N I +SGT
Sbjct: 263 LDFRDFDYSGTSLKALSIHQVVSDVFG--FPQSY--IYEIFSNMNIKNFTVSGTRMVHML 318
Query: 215 IPPGIRNLVNLIGFGAEENQLHGTIPDAIGELKNLQKLCLFRNFLQGRIPSGLGNLTKLA 274
P I ++L N L T+ + G L L+ L L N L L+K+A
Sbjct: 319 CPSKISPFLHL---DFSNNLLTDTVFENCGHLTELETLILQMN--------QLKELSKIA 367
Query: 275 NLELSSNSLQGNIPSSLGNCQNLMSFTASQNKLTGALPHQLLSITTXXXXXXXXXXXXXX 334
+ SLQ L QN +S+ + +
Sbjct: 368 EMTTQMKSLQ-----QLDISQNSVSYDEKKGDCSWT------------------------ 398
Query: 335 XXXXQVGHLKNLVILDISSNQFSGVIPGTLSTCVC--LEYLDISSNSFHGVIPLSLSFLK 392
K+L+ L++SSN ++ T+ C+ ++ LD+ SN IP + L+
Sbjct: 399 ---------KSLLSLNMSSN----ILTDTIFRCLPPRIKVLDLHSNKIKS-IPKQVVKLE 444
Query: 393 SIKELNVSSNNLSGQIPEFLKNLSVLEFLSLSYNHFEGEVPTKGVFS---NKTKISLQGN 449
+++ELNV+SN L L+ L+ + L N ++ P S NK QG+
Sbjct: 445 ALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGS 504
Query: 450 MKLCGGIDELHLPSCP 465
K G + CP
Sbjct: 505 AKCSGSGKPVRSIICP 520
Score = 32.7 bits (73), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 11/136 (8%)
Query: 4 LAVNDNYLTGQLPDFVGNLSDLEVIRIMGNSLG--GKIPTTLGLLRNLVSLNVAENKFSG 61
L ++N LT + + G+L++LE + + N L KI +++L L++++N S
Sbjct: 329 LDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSY 388
Query: 62 MFPRSICNIS-SLELIQLALNRFSGNLPFDIVVNL--PNLKALAIGGNNFFGSIPYSLSN 118
+ C+ + SL L+LN S N+ D + P +K L + N SIP +
Sbjct: 389 DEKKGDCSWTKSL----LSLN-MSSNILTDTIFRCLPPRIKVLDLHSNK-IKSIPKQVVK 442
Query: 119 ASNLELLDLSVNQFKG 134
L+ L+++ NQ K
Sbjct: 443 LEALQELNVASNQLKS 458
Score = 29.3 bits (64), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 343 LKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNVSSN 402
L L IL IS N+ + LEYLD+S N ++ +S ++K L++S N
Sbjct: 44 LSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNK---LVKISCHPTVNLKHLDLSFN 100
Query: 403 NLSG-QIPEFLKNLSVLEFLSLSYNHFE 429
I + N+S L+FL LS H E
Sbjct: 101 AFDALPICKEFGNMSQLKFLGLSTTHLE 128
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 31/163 (19%)
Query: 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG---ASRSFVAECEALRNIRHRNLIKIIT 595
IG G+ G V E VA+K ++ ++ A R++ E ++ + H+N+I ++
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGLLN 90
Query: 596 ICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYL 655
+ + + F Y+ +E+ +L Q + + +D M YL
Sbjct: 91 VFTPQ----KSLEEFQDVYI--------------VMELMDANLSQVIQMELD-HERMSYL 131
Query: 656 --------HHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690
H ++H DLKPSN+++ D + DFGLA+
Sbjct: 132 LYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 83/216 (38%), Gaps = 47/216 (21%)
Query: 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIK 592
F + +G GS+G V+K ED + AVK ++G R R L +
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGP------------KDRARKLAE 106
Query: 593 IITICSSTDFKGTDFKAFVFE--YMENGSLKDWLHQSDDQVEVCKLSLIQRVNI---AID 647
+ S + G E + E G L +L Q E+C SL Q ++
Sbjct: 107 V----GSHEKVGQHPCCVRLEQAWEEGGIL--YL-----QTELCGPSLQQHCEAWGASLP 155
Query: 648 VASAMEYL--------HHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDT 699
A YL H H Q +VH D+KP+N+ L + DFGL
Sbjct: 156 EAQVWGYLRDTLLALAHLHSQG-LVHLDVKPANIFLGPRGRCKLGDFGLL---------V 205
Query: 700 AVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFT 735
+ T + +G Y+APE GS + D+F+
Sbjct: 206 ELGTAGAGEVQEGDPRYMAPELLQGSYGT-AADVFS 240
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,314,604
Number of Sequences: 62578
Number of extensions: 887286
Number of successful extensions: 4572
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 454
Number of HSP's that attempted gapping in prelim test: 2479
Number of HSP's gapped (non-prelim): 1445
length of query: 833
length of database: 14,973,337
effective HSP length: 107
effective length of query: 726
effective length of database: 8,277,491
effective search space: 6009458466
effective search space used: 6009458466
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)