Query 040925
Match_columns 833
No_of_seqs 828 out of 5671
Neff 9.9
Searched_HMMs 46136
Date Fri Mar 29 13:11:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040925.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040925hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 2.8E-93 6.1E-98 875.4 57.7 777 1-827 142-954 (968)
2 PLN00113 leucine-rich repeat r 100.0 5E-54 1.1E-58 528.0 34.1 445 1-456 120-588 (968)
3 KOG0581 Mitogen-activated prot 100.0 7E-47 1.5E-51 375.5 14.9 251 532-820 80-335 (364)
4 KOG4194 Membrane glycoprotein 100.0 9.1E-47 2E-51 389.7 6.1 408 15-435 46-458 (873)
5 KOG0595 Serine/threonine-prote 100.0 4.4E-45 9.6E-50 365.3 14.5 200 529-761 8-215 (429)
6 KOG4194 Membrane glycoprotein 100.0 1.2E-46 2.6E-51 388.8 3.0 366 27-404 82-451 (873)
7 KOG1187 Serine/threonine prote 100.0 1.6E-43 3.5E-48 375.9 24.2 269 517-826 61-354 (361)
8 KOG0615 Serine/threonine prote 100.0 2.7E-44 5.9E-49 358.6 15.3 254 530-820 171-437 (475)
9 KOG0575 Polo-like serine/threo 100.0 7.5E-44 1.6E-48 374.4 17.8 249 531-820 18-269 (592)
10 KOG0192 Tyrosine kinase specif 100.0 1.4E-43 3E-48 372.8 19.6 260 533-830 43-309 (362)
11 KOG0591 NIMA (never in mitosis 100.0 1.9E-45 4.2E-50 348.3 4.3 264 529-823 17-284 (375)
12 KOG0472 Leucine-rich repeat pr 100.0 1.2E-46 2.5E-51 372.9 -15.1 427 1-452 47-541 (565)
13 KOG0197 Tyrosine kinases [Sign 100.0 1.3E-42 2.8E-47 362.1 12.2 259 532-828 207-465 (468)
14 KOG0593 Predicted protein kina 100.0 3.9E-42 8.5E-47 329.3 11.5 268 531-820 2-284 (396)
15 KOG0592 3-phosphoinositide-dep 100.0 5.5E-42 1.2E-46 353.7 12.6 261 527-820 69-338 (604)
16 KOG0598 Ribosomal protein S6 k 100.0 6.8E-42 1.5E-46 340.0 11.8 244 529-812 23-269 (357)
17 KOG0198 MEKK and related serin 100.0 3.8E-41 8.2E-46 342.6 15.4 263 530-824 16-280 (313)
18 KOG0659 Cdk activating kinase 100.0 2.6E-41 5.6E-46 318.5 13.0 268 531-820 2-281 (318)
19 KOG0661 MAPK related serine/th 100.0 2.6E-42 5.7E-47 350.5 6.7 269 529-820 8-291 (538)
20 KOG0582 Ste20-like serine/thre 100.0 8.2E-41 1.8E-45 337.0 17.1 264 529-820 24-293 (516)
21 KOG0578 p21-activated serine/t 100.0 3E-41 6.4E-46 352.0 14.0 251 531-820 273-523 (550)
22 KOG0600 Cdc2-related protein k 100.0 4.8E-41 1.1E-45 343.9 14.0 269 531-819 117-399 (560)
23 KOG0472 Leucine-rich repeat pr 100.0 1.5E-44 3.2E-49 358.0 -15.0 409 1-435 70-546 (565)
24 KOG0193 Serine/threonine prote 100.0 1.5E-40 3.3E-45 347.2 14.1 269 522-827 383-656 (678)
25 KOG0201 Serine/threonine prote 100.0 3.7E-41 8.1E-46 339.7 7.3 250 531-820 13-263 (467)
26 KOG2345 Serine/threonine prote 100.0 5.6E-40 1.2E-44 306.3 10.8 279 528-824 18-300 (302)
27 KOG0583 Serine/threonine prote 100.0 5.1E-39 1.1E-43 342.2 19.0 251 528-819 14-274 (370)
28 KOG1026 Nerve growth factor re 100.0 1.3E-39 2.8E-44 356.1 14.3 266 531-827 486-765 (774)
29 KOG0597 Serine-threonine prote 100.0 8.6E-40 1.9E-44 337.1 9.3 248 531-820 2-251 (808)
30 KOG0616 cAMP-dependent protein 100.0 2.3E-39 5E-44 309.9 10.4 238 530-811 43-283 (355)
31 KOG0588 Serine/threonine prote 100.0 6.4E-39 1.4E-43 337.8 13.5 249 530-820 11-263 (786)
32 KOG4721 Serine/threonine prote 100.0 2.5E-39 5.4E-44 333.3 10.1 244 535-827 128-371 (904)
33 KOG0605 NDR and related serine 100.0 1.5E-38 3.2E-43 329.0 15.3 263 527-819 137-444 (550)
34 KOG0660 Mitogen-activated prot 100.0 3.6E-39 7.8E-44 319.1 9.8 276 529-820 20-310 (359)
35 KOG0663 Protein kinase PITSLRE 100.0 1.2E-38 2.6E-43 309.6 12.9 268 531-820 76-361 (419)
36 KOG0585 Ca2+/calmodulin-depend 100.0 2E-38 4.3E-43 321.7 13.8 263 527-821 93-373 (576)
37 KOG0658 Glycogen synthase kina 100.0 6.6E-39 1.4E-43 317.9 8.2 268 532-820 25-306 (364)
38 cd05102 PTKc_VEGFR3 Catalytic 100.0 7E-38 1.5E-42 338.6 16.1 268 529-826 5-336 (338)
39 KOG0589 Serine/threonine prote 100.0 3.2E-38 6.9E-43 328.6 12.7 254 530-820 3-258 (426)
40 KOG0580 Serine/threonine prote 100.0 1.5E-38 3.3E-43 295.5 8.4 250 530-820 21-273 (281)
41 KOG0611 Predicted serine/threo 100.0 1.7E-38 3.8E-43 314.6 9.2 248 531-821 53-304 (668)
42 KOG0033 Ca2+/calmodulin-depend 100.0 8.8E-40 1.9E-44 303.5 -0.2 253 530-820 10-267 (355)
43 KOG3653 Transforming growth fa 100.0 1.8E-37 3.8E-42 315.2 16.3 269 531-828 210-507 (534)
44 KOG1989 ARK protein kinase fam 100.0 7E-38 1.5E-42 344.7 14.0 268 531-827 37-314 (738)
45 KOG0574 STE20-like serine/thre 100.0 2.2E-39 4.9E-44 309.1 1.9 249 533-820 35-283 (502)
46 KOG0194 Protein tyrosine kinas 100.0 2.5E-37 5.4E-42 328.5 15.6 259 532-827 158-423 (474)
47 KOG0694 Serine/threonine prote 100.0 1.9E-37 4.1E-42 329.9 14.4 243 527-814 364-613 (694)
48 PHA02988 hypothetical protein; 100.0 1.1E-36 2.4E-41 319.6 18.7 251 537-826 26-281 (283)
49 cd05571 STKc_PKB Catalytic dom 100.0 6.6E-37 1.4E-41 328.1 17.3 243 537-820 1-251 (323)
50 KOG2052 Activin A type IB rece 100.0 2.2E-37 4.9E-42 312.0 12.4 271 530-827 210-506 (513)
51 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 7.6E-37 1.6E-41 329.5 17.5 254 531-820 1-257 (333)
52 KOG0444 Cytoskeletal regulator 100.0 1.2E-39 2.6E-44 338.8 -4.1 366 2-409 10-379 (1255)
53 cd06649 PKc_MEK2 Catalytic dom 100.0 9.1E-37 2E-41 328.2 17.9 258 530-820 4-301 (331)
54 cd05096 PTKc_DDR1 Catalytic do 100.0 7.3E-37 1.6E-41 325.5 16.8 268 530-823 4-304 (304)
55 KOG0594 Protein kinase PCTAIRE 100.0 2.4E-37 5.3E-42 308.0 12.2 276 530-824 10-308 (323)
56 cd05631 STKc_GRK4 Catalytic do 100.0 8.6E-37 1.9E-41 321.4 17.0 252 532-820 1-261 (285)
57 KOG0599 Phosphorylase kinase g 100.0 9.6E-38 2.1E-42 294.4 8.1 254 528-820 14-283 (411)
58 KOG0577 Serine/threonine prote 100.0 8.6E-38 1.9E-42 323.3 8.3 245 533-820 28-278 (948)
59 cd05612 STKc_PRKX_like Catalyt 100.0 3.4E-37 7.4E-42 325.4 12.9 246 531-820 1-254 (291)
60 PTZ00263 protein kinase A cata 100.0 6.3E-37 1.4E-41 328.9 14.7 247 530-820 17-271 (329)
61 KOG0196 Tyrosine kinase, EPH ( 100.0 1.3E-37 2.9E-42 332.6 8.9 258 533-826 631-893 (996)
62 KOG0579 Ste20-like serine/thre 100.0 5.6E-38 1.2E-42 326.5 5.7 253 531-820 32-289 (1187)
63 KOG1095 Protein tyrosine kinas 100.0 2.6E-37 5.7E-42 350.8 11.1 268 532-830 693-967 (1025)
64 cd07848 STKc_CDKL5 Catalytic d 100.0 1.7E-36 3.6E-41 320.2 16.5 258 531-819 1-283 (287)
65 cd05064 PTKc_EphR_A10 Catalyti 100.0 2.3E-36 4.9E-41 315.1 16.3 257 530-824 4-265 (266)
66 cd05593 STKc_PKB_gamma Catalyt 100.0 3.8E-36 8.2E-41 322.6 17.9 243 537-820 1-251 (328)
67 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3.1E-36 6.7E-41 326.1 16.8 264 532-820 1-290 (338)
68 cd05595 STKc_PKB_beta Catalyti 100.0 3E-36 6.4E-41 322.8 16.2 243 537-820 1-251 (323)
69 PTZ00426 cAMP-dependent protei 100.0 2.4E-36 5.2E-41 324.8 15.6 248 529-820 28-284 (340)
70 cd06650 PKc_MEK1 Catalytic dom 100.0 3.9E-36 8.5E-41 323.1 17.1 258 530-820 4-299 (333)
71 cd05585 STKc_YPK1_like Catalyt 100.0 2.5E-36 5.5E-41 322.0 15.5 241 539-820 1-247 (312)
72 KOG0610 Putative serine/threon 100.0 3.6E-36 7.7E-41 301.3 14.8 260 531-819 77-391 (459)
73 PHA03212 serine/threonine kina 100.0 8.9E-36 1.9E-40 325.7 19.1 252 531-820 92-376 (391)
74 cd05104 PTKc_Kit Catalytic dom 100.0 5.2E-36 1.1E-40 327.1 17.3 264 530-824 34-374 (375)
75 cd07871 STKc_PCTAIRE3 Catalyti 100.0 7E-36 1.5E-40 315.0 17.2 258 530-819 4-284 (288)
76 cd05599 STKc_NDR_like Catalyti 100.0 4.7E-36 1E-40 327.7 16.1 260 531-820 1-296 (364)
77 cd05106 PTKc_CSF-1R Catalytic 100.0 4.3E-36 9.3E-41 327.4 15.7 266 529-825 36-373 (374)
78 cd05626 STKc_LATS2 Catalytic d 100.0 9.3E-36 2E-40 326.6 18.3 260 532-820 2-305 (381)
79 cd05052 PTKc_Abl Catalytic dom 100.0 9.2E-36 2E-40 310.1 17.3 256 531-824 6-262 (263)
80 cd05594 STKc_PKB_alpha Catalyt 100.0 5.7E-36 1.2E-40 321.3 16.1 243 537-820 1-252 (325)
81 cd05573 STKc_ROCK_NDR_like Cat 100.0 5.6E-36 1.2E-40 325.6 16.1 258 531-820 1-285 (350)
82 cd05618 STKc_aPKC_iota Catalyt 100.0 8.1E-36 1.8E-40 320.1 17.1 246 537-820 1-262 (329)
83 cd08228 STKc_Nek6 Catalytic do 100.0 1.3E-35 2.7E-40 310.0 18.2 262 531-825 2-266 (267)
84 cd05588 STKc_aPKC Catalytic do 100.0 7.8E-36 1.7E-40 320.5 16.7 246 537-820 1-262 (329)
85 cd07862 STKc_CDK6 Catalytic do 100.0 1.4E-35 3.1E-40 313.6 18.3 262 531-819 1-286 (290)
86 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.4E-35 3.1E-40 315.3 17.6 259 530-820 4-288 (303)
87 cd05108 PTKc_EGFR Catalytic do 100.0 1.3E-35 2.8E-40 317.5 16.8 259 531-827 7-271 (316)
88 cd05048 PTKc_Ror Catalytic Dom 100.0 1.3E-35 2.9E-40 312.6 16.5 261 531-823 5-282 (283)
89 cd05589 STKc_PKN Catalytic dom 100.0 1.2E-35 2.6E-40 318.7 16.3 246 533-820 1-257 (324)
90 PLN00034 mitogen-activated pro 100.0 1.2E-35 2.7E-40 322.5 16.4 249 531-820 74-328 (353)
91 cd05114 PTKc_Tec_Rlk Catalytic 100.0 2.1E-35 4.5E-40 306.2 17.1 251 531-821 4-255 (256)
92 PTZ00267 NIMA-related protein 100.0 1.1E-35 2.4E-40 334.2 16.1 255 532-820 68-323 (478)
93 cd05148 PTKc_Srm_Brk Catalytic 100.0 7.3E-36 1.6E-40 310.6 13.5 257 529-824 4-261 (261)
94 cd06646 STKc_MAP4K5 Catalytic 100.0 2.2E-35 4.9E-40 308.0 17.1 256 530-821 8-266 (267)
95 KOG4257 Focal adhesion tyrosin 100.0 2E-36 4.2E-41 315.1 9.0 257 532-826 390-651 (974)
96 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 2.7E-35 5.9E-40 310.4 17.9 263 531-824 4-283 (284)
97 cd05598 STKc_LATS Catalytic do 100.0 1.3E-35 2.8E-40 325.5 16.0 260 531-820 1-301 (376)
98 cd05628 STKc_NDR1 Catalytic do 100.0 2.6E-35 5.6E-40 321.1 18.0 259 531-820 1-293 (363)
99 KOG0444 Cytoskeletal regulator 100.0 3.1E-38 6.8E-43 328.3 -5.0 373 20-434 4-380 (1255)
100 cd05629 STKc_NDR_like_fungal C 100.0 1.8E-35 3.9E-40 324.2 16.5 260 531-820 1-305 (377)
101 cd05105 PTKc_PDGFR_alpha Catal 100.0 2.3E-35 5E-40 322.4 17.3 269 527-826 33-399 (400)
102 cd05072 PTKc_Lyn Catalytic dom 100.0 2.6E-35 5.6E-40 306.5 16.7 255 530-823 5-260 (261)
103 cd05587 STKc_cPKC Catalytic do 100.0 1.7E-35 3.7E-40 317.5 15.8 242 532-814 1-246 (324)
104 PRK13184 pknD serine/threonine 100.0 3.5E-35 7.7E-40 336.7 19.3 272 531-826 2-292 (932)
105 cd05093 PTKc_TrkB Catalytic do 100.0 3.2E-35 6.9E-40 310.2 17.3 265 531-827 5-282 (288)
106 cd05590 STKc_nPKC_eta Catalyti 100.0 1.8E-35 3.9E-40 316.3 15.6 237 537-814 1-241 (320)
107 cd05592 STKc_nPKC_theta_delta 100.0 2.4E-35 5.2E-40 314.8 16.4 242 537-819 1-247 (316)
108 cd05625 STKc_LATS1 Catalytic d 100.0 2.3E-35 4.9E-40 324.1 16.7 259 532-820 2-305 (382)
109 KOG4279 Serine/threonine prote 100.0 1E-35 2.2E-40 312.9 13.0 247 537-820 581-832 (1226)
110 KOG0032 Ca2+/calmodulin-depend 100.0 3.4E-35 7.4E-40 312.2 17.3 253 529-820 33-293 (382)
111 cd05614 STKc_MSK2_N N-terminal 100.0 3.3E-35 7.1E-40 316.7 17.5 251 532-820 1-267 (332)
112 cd05584 STKc_p70S6K Catalytic 100.0 3.1E-35 6.7E-40 315.1 17.0 244 536-820 1-256 (323)
113 KOG1094 Discoidin domain recep 100.0 7.8E-36 1.7E-40 309.0 11.7 265 531-824 538-804 (807)
114 cd05596 STKc_ROCK Catalytic do 100.0 1.9E-35 4.1E-40 322.0 15.4 255 529-820 41-304 (370)
115 cd05605 STKc_GRK4_like Catalyt 100.0 3.6E-35 7.7E-40 309.2 16.8 252 532-820 1-261 (285)
116 cd05591 STKc_nPKC_epsilon Cata 100.0 2.5E-35 5.5E-40 315.7 15.9 243 537-820 1-254 (321)
117 cd05601 STKc_CRIK Catalytic do 100.0 1.6E-35 3.6E-40 318.8 14.6 254 531-820 1-263 (330)
118 PTZ00283 serine/threonine prot 100.0 1.4E-35 3.1E-40 333.1 14.6 265 527-820 28-297 (496)
119 cd05621 STKc_ROCK2 Catalytic d 100.0 2.6E-35 5.7E-40 320.4 16.2 258 526-820 38-304 (370)
120 KOG4278 Protein tyrosine kinas 100.0 5.5E-36 1.2E-40 311.1 10.1 264 525-826 261-525 (1157)
121 cd05049 PTKc_Trk Catalytic dom 100.0 3.4E-35 7.4E-40 309.0 16.3 261 530-822 4-279 (280)
122 cd05054 PTKc_VEGFR Catalytic d 100.0 3.2E-35 6.9E-40 316.2 16.1 267 530-826 6-335 (337)
123 cd05620 STKc_nPKC_delta Cataly 100.0 2.6E-35 5.5E-40 314.6 15.2 241 537-818 1-246 (316)
124 cd05068 PTKc_Frk_like Catalyti 100.0 6.6E-35 1.4E-39 303.3 17.8 255 530-823 5-260 (261)
125 PF07714 Pkinase_Tyr: Protein 100.0 7.5E-36 1.6E-40 309.4 10.6 251 535-821 3-259 (259)
126 cd05035 PTKc_Axl_like Catalyti 100.0 8.7E-35 1.9E-39 304.8 18.8 265 533-824 1-272 (273)
127 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.2E-34 2.7E-39 302.5 19.7 262 531-825 2-266 (267)
128 cd05111 PTK_HER3 Pseudokinase 100.0 7.7E-35 1.7E-39 305.7 18.1 259 531-827 7-271 (279)
129 cd05619 STKc_nPKC_theta Cataly 100.0 4.1E-35 8.9E-40 312.8 16.2 242 537-819 1-247 (316)
130 KOG0667 Dual-specificity tyros 100.0 2.9E-35 6.4E-40 313.7 14.9 190 532-746 187-384 (586)
131 cd06619 PKc_MKK5 Catalytic dom 100.0 6.4E-35 1.4E-39 306.4 17.2 252 531-820 1-253 (279)
132 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 7.5E-35 1.6E-39 306.8 17.7 266 532-825 4-282 (283)
133 cd05033 PTKc_EphR Catalytic do 100.0 9E-35 1.9E-39 303.2 18.1 258 530-824 3-265 (266)
134 cd05113 PTKc_Btk_Bmx Catalytic 100.0 4.3E-35 9.4E-40 303.5 15.5 252 531-822 4-256 (256)
135 cd05084 PTKc_Fes Catalytic dom 100.0 7.2E-35 1.6E-39 301.4 17.1 249 537-822 1-251 (252)
136 cd05575 STKc_SGK Catalytic dom 100.0 4.2E-35 9E-40 314.3 15.8 238 537-815 1-242 (323)
137 cd05616 STKc_cPKC_beta Catalyt 100.0 5.1E-35 1.1E-39 313.6 16.5 242 532-814 1-246 (323)
138 cd05607 STKc_GRK7 Catalytic do 100.0 5.9E-35 1.3E-39 306.1 16.5 246 539-821 1-251 (277)
139 cd08229 STKc_Nek7 Catalytic do 100.0 6.5E-35 1.4E-39 304.6 16.8 262 531-825 2-266 (267)
140 cd05075 PTKc_Axl Catalytic dom 100.0 7.5E-35 1.6E-39 305.0 17.3 265 533-824 1-271 (272)
141 KOG0618 Serine/threonine phosp 100.0 1.6E-37 3.5E-42 338.6 -3.0 422 1-452 47-489 (1081)
142 cd05570 STKc_PKC Catalytic dom 100.0 4.1E-35 8.8E-40 313.5 15.5 243 537-820 1-252 (318)
143 cd05109 PTKc_HER2 Catalytic do 100.0 7.2E-35 1.6E-39 306.2 16.9 261 530-828 6-272 (279)
144 cd05608 STKc_GRK1 Catalytic do 100.0 5.7E-35 1.2E-39 306.8 16.0 247 539-820 1-257 (280)
145 cd07863 STKc_CDK4 Catalytic do 100.0 1.1E-34 2.4E-39 306.4 18.3 261 532-819 1-284 (288)
146 cd05062 PTKc_IGF-1R Catalytic 100.0 4.5E-35 9.7E-40 307.4 15.1 263 529-823 4-277 (277)
147 cd05053 PTKc_FGFR Catalytic do 100.0 1E-34 2.2E-39 307.6 17.7 266 528-825 9-292 (293)
148 cd08219 STKc_Nek3 Catalytic do 100.0 1.4E-34 3.1E-39 299.7 18.2 251 532-820 1-252 (255)
149 cd05094 PTKc_TrkC Catalytic do 100.0 1E-34 2.2E-39 306.9 17.3 265 531-827 5-285 (291)
150 cd06654 STKc_PAK1 Catalytic do 100.0 1.3E-34 2.9E-39 306.4 18.1 251 531-820 20-270 (296)
151 PTZ00036 glycogen synthase kin 100.0 5.2E-35 1.1E-39 324.9 15.6 262 530-820 65-351 (440)
152 cd05602 STKc_SGK1 Catalytic do 100.0 5.8E-35 1.3E-39 313.5 15.4 242 537-819 1-246 (325)
153 cd05622 STKc_ROCK1 Catalytic d 100.0 8.5E-35 1.8E-39 316.8 16.7 261 523-820 35-304 (371)
154 cd05582 STKc_RSK_N N-terminal 100.0 4.8E-35 1E-39 313.3 14.5 239 537-816 2-245 (318)
155 cd05088 PTKc_Tie2 Catalytic do 100.0 1.5E-34 3.3E-39 307.1 18.2 263 530-827 6-283 (303)
156 KOG0604 MAP kinase-activated p 100.0 1.8E-35 4E-40 283.0 9.9 257 529-820 59-322 (400)
157 cd06637 STKc_TNIK Catalytic do 100.0 8.8E-35 1.9E-39 304.5 16.1 259 528-819 3-268 (272)
158 cd08529 STKc_FA2-like Catalyti 100.0 1.7E-34 3.7E-39 299.4 17.9 251 532-820 1-253 (256)
159 cd05071 PTKc_Src Catalytic dom 100.0 1.8E-34 4E-39 299.9 18.0 255 530-824 5-260 (262)
160 cd05059 PTKc_Tec_like Catalyti 100.0 1.1E-34 2.3E-39 300.7 16.0 251 531-821 4-255 (256)
161 cd05627 STKc_NDR2 Catalytic do 100.0 9.3E-35 2E-39 316.5 16.2 258 531-820 1-293 (360)
162 cd05604 STKc_SGK3 Catalytic do 100.0 7E-35 1.5E-39 312.9 14.9 242 537-819 1-246 (325)
163 cd07876 STKc_JNK2 Catalytic do 100.0 2.5E-34 5.4E-39 313.2 19.5 262 528-820 18-315 (359)
164 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.1E-34 2.4E-39 311.3 16.3 240 537-814 1-248 (327)
165 cd06615 PKc_MEK Catalytic doma 100.0 2.1E-34 4.6E-39 306.8 18.2 257 531-820 1-287 (308)
166 cd06645 STKc_MAP4K3 Catalytic 100.0 9.8E-35 2.1E-39 303.2 15.2 254 530-819 8-264 (267)
167 cd05097 PTKc_DDR_like Catalyti 100.0 1.4E-34 3.1E-39 306.5 16.6 266 531-822 5-294 (295)
168 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 3.5E-34 7.5E-39 301.8 19.5 262 532-824 5-283 (284)
169 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 2.3E-34 5E-39 299.1 17.7 254 530-823 5-259 (260)
170 cd06625 STKc_MEKK3_like Cataly 100.0 2.5E-34 5.4E-39 299.5 18.0 254 531-820 2-260 (263)
171 cd06638 STKc_myosinIIIA Cataly 100.0 1.4E-34 2.9E-39 305.4 16.0 270 521-820 8-283 (286)
172 cd05089 PTKc_Tie1 Catalytic do 100.0 2.5E-34 5.3E-39 304.8 17.9 264 531-829 2-280 (297)
173 cd05615 STKc_cPKC_alpha Cataly 100.0 1.3E-34 2.9E-39 310.0 15.9 242 532-814 1-246 (323)
174 cd05630 STKc_GRK6 Catalytic do 100.0 1.5E-34 3.3E-39 304.2 16.0 252 532-820 1-261 (285)
175 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.4E-34 3.1E-39 315.9 16.2 269 526-825 32-400 (401)
176 cd05103 PTKc_VEGFR2 Catalytic 100.0 2.1E-34 4.5E-39 311.3 17.4 268 530-827 6-342 (343)
177 KOG0584 Serine/threonine prote 100.0 3.3E-35 7.2E-40 309.8 10.5 248 535-820 44-296 (632)
178 cd05065 PTKc_EphR_B Catalytic 100.0 2.7E-34 5.8E-39 300.2 17.2 260 531-824 4-268 (269)
179 cd05092 PTKc_TrkA Catalytic do 100.0 1.9E-34 4.1E-39 303.0 16.0 260 531-822 5-279 (280)
180 KOG4717 Serine/threonine prote 100.0 1E-34 2.2E-39 296.0 13.2 250 530-820 17-270 (864)
181 cd07872 STKc_PCTAIRE2 Catalyti 100.0 3E-34 6.6E-39 306.0 17.6 258 531-820 6-286 (309)
182 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.7E-34 5.8E-39 300.1 16.9 259 530-824 4-267 (268)
183 cd05603 STKc_SGK2 Catalytic do 100.0 1.7E-34 3.7E-39 309.4 15.7 238 537-815 1-242 (321)
184 PF00069 Pkinase: Protein kina 100.0 1.2E-34 2.5E-39 301.4 14.0 253 533-819 1-256 (260)
185 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.8E-34 3.9E-39 302.8 15.5 262 529-822 4-276 (277)
186 cd05066 PTKc_EphR_A Catalytic 100.0 2.9E-34 6.3E-39 299.5 16.9 259 530-824 3-266 (267)
187 cd07853 STKc_NLK Catalytic dom 100.0 1.7E-34 3.7E-39 315.9 15.9 262 532-820 1-288 (372)
188 cd05090 PTKc_Ror1 Catalytic do 100.0 2.3E-34 5E-39 303.1 16.3 261 531-823 5-282 (283)
189 PTZ00284 protein kinase; Provi 100.0 2.2E-34 4.7E-39 324.0 17.1 261 524-820 122-438 (467)
190 cd05115 PTKc_Zap-70 Catalytic 100.0 3.7E-34 8.1E-39 296.6 17.5 250 538-824 2-255 (257)
191 cd05101 PTKc_FGFR2 Catalytic d 100.0 3.2E-34 6.9E-39 305.2 17.5 267 529-827 13-299 (304)
192 cd05095 PTKc_DDR2 Catalytic do 100.0 3.3E-34 7.1E-39 303.8 17.5 265 531-823 5-296 (296)
193 cd06656 STKc_PAK3 Catalytic do 100.0 3.6E-34 7.9E-39 303.3 17.7 251 531-820 19-269 (297)
194 cd05032 PTKc_InsR_like Catalyt 100.0 2.5E-34 5.5E-39 301.9 16.2 261 530-822 5-276 (277)
195 cd05098 PTKc_FGFR1 Catalytic d 100.0 3.1E-34 6.8E-39 305.6 17.1 267 530-828 17-303 (307)
196 PTZ00266 NIMA-related protein 100.0 1.3E-34 2.7E-39 333.3 14.7 261 527-819 9-294 (1021)
197 cd07874 STKc_JNK3 Catalytic do 100.0 3E-34 6.6E-39 312.2 16.9 262 528-820 14-311 (355)
198 cd05051 PTKc_DDR Catalytic dom 100.0 5.2E-34 1.1E-38 302.6 18.2 267 530-822 4-295 (296)
199 cd05060 PTKc_Syk_like Catalyti 100.0 4E-34 8.7E-39 296.7 17.0 251 537-825 1-256 (257)
200 cd05099 PTKc_FGFR4 Catalytic d 100.0 4.6E-34 1E-38 305.2 17.9 268 530-829 11-298 (314)
201 cd05091 PTKc_Ror2 Catalytic do 100.0 2E-34 4.2E-39 303.7 14.8 261 531-823 5-282 (283)
202 cd05116 PTKc_Syk Catalytic dom 100.0 4.4E-34 9.6E-39 296.3 17.2 249 538-824 2-255 (257)
203 cd05045 PTKc_RET Catalytic dom 100.0 4.3E-34 9.3E-39 302.1 17.2 263 532-826 1-288 (290)
204 cd05039 PTKc_Csk_like Catalyti 100.0 5.1E-34 1.1E-38 295.8 17.3 251 530-824 5-256 (256)
205 cd07878 STKc_p38beta_MAPK11 Ca 100.0 5E-34 1.1E-38 309.0 18.0 261 528-820 12-298 (343)
206 cd05082 PTKc_Csk Catalytic dom 100.0 4.5E-34 9.8E-39 296.1 16.9 251 530-824 5-256 (256)
207 cd06613 STKc_MAP4K3_like Catal 100.0 6.9E-34 1.5E-38 296.0 18.4 254 531-819 3-259 (262)
208 cd05069 PTKc_Yes Catalytic dom 100.0 6.7E-34 1.5E-38 295.5 18.2 254 530-823 5-259 (260)
209 cd06643 STKc_SLK Catalytic dom 100.0 5.7E-34 1.2E-38 299.9 17.9 251 533-820 7-262 (282)
210 cd06655 STKc_PAK2 Catalytic do 100.0 4.7E-34 1E-38 302.1 17.3 251 531-820 19-269 (296)
211 cd05632 STKc_GRK5 Catalytic do 100.0 4.2E-34 9.2E-39 301.0 16.9 253 532-820 1-261 (285)
212 cd05055 PTKc_PDGFR Catalytic d 100.0 4.4E-34 9.6E-39 303.2 17.1 260 530-824 34-301 (302)
213 cd05061 PTKc_InsR Catalytic do 100.0 3.1E-34 6.7E-39 302.7 15.8 266 528-825 3-279 (288)
214 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 4.4E-34 9.5E-39 296.9 16.6 240 537-821 1-261 (262)
215 cd05067 PTKc_Lck_Blk Catalytic 100.0 5E-34 1.1E-38 296.5 17.0 254 530-823 5-259 (260)
216 cd06644 STKc_STK10_LOK Catalyt 100.0 6.3E-34 1.4E-38 301.1 18.0 253 531-820 12-269 (292)
217 cd06628 STKc_MAPKKK_Byr2_like 100.0 8.6E-34 1.9E-38 296.1 18.4 254 532-819 1-263 (267)
218 cd06624 STKc_ASK Catalytic dom 100.0 6.3E-34 1.4E-38 297.2 17.3 257 527-820 4-265 (268)
219 cd06639 STKc_myosinIIIB Cataly 100.0 4.2E-34 9.2E-39 302.4 16.0 270 521-820 12-287 (291)
220 cd05056 PTKc_FAK Catalytic dom 100.0 7.2E-34 1.6E-38 297.1 17.4 258 531-827 6-268 (270)
221 KOG0596 Dual specificity; seri 100.0 1.7E-34 3.8E-39 298.1 12.2 246 530-820 360-627 (677)
222 cd05058 PTKc_Met_Ron Catalytic 100.0 7.3E-34 1.6E-38 295.8 17.1 256 537-826 1-261 (262)
223 cd06611 STKc_SLK_like Catalyti 100.0 3.7E-34 8.1E-39 301.0 15.0 254 530-820 4-262 (280)
224 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 4.9E-34 1.1E-38 300.7 15.7 257 531-821 5-267 (284)
225 cd05043 PTK_Ryk Pseudokinase d 100.0 6.3E-34 1.4E-38 299.3 16.5 268 529-827 4-279 (280)
226 cd05597 STKc_DMPK_like Catalyt 100.0 1.2E-33 2.7E-38 303.7 19.1 256 531-820 1-266 (331)
227 PHA03211 serine/threonine kina 100.0 5.9E-34 1.3E-38 314.4 16.5 187 530-742 168-354 (461)
228 cd06636 STKc_MAP4K4_6 Catalyti 100.0 8.1E-34 1.8E-38 298.8 16.8 266 521-819 6-278 (282)
229 cd07875 STKc_JNK1 Catalytic do 100.0 1E-33 2.3E-38 308.9 18.1 261 529-820 22-318 (364)
230 cd06612 STKc_MST1_2 Catalytic 100.0 1E-33 2.3E-38 293.5 16.9 250 531-819 3-252 (256)
231 cd05057 PTKc_EGFR_like Catalyt 100.0 1.4E-33 3.1E-38 296.4 17.9 259 531-827 7-271 (279)
232 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 5E-34 1.1E-38 298.4 14.3 240 538-822 2-274 (274)
233 cd08223 STKc_Nek4 Catalytic do 100.0 1.3E-33 2.9E-38 292.9 17.4 252 532-820 1-254 (257)
234 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.3E-33 2.9E-38 297.6 17.6 263 531-824 4-283 (284)
235 cd06640 STKc_MST4 Catalytic do 100.0 2.1E-33 4.6E-38 294.6 18.9 249 531-820 4-253 (277)
236 PHA03209 serine/threonine kina 100.0 7E-34 1.5E-38 308.6 15.7 188 528-744 63-250 (357)
237 cd05586 STKc_Sck1_like Catalyt 100.0 5.3E-34 1.1E-38 306.9 14.7 241 539-819 1-252 (330)
238 cd05034 PTKc_Src_like Catalyti 100.0 1.2E-33 2.7E-38 293.9 17.0 256 529-823 4-260 (261)
239 cd05624 STKc_MRCK_beta Catalyt 100.0 1.4E-33 2.9E-38 303.4 17.8 256 531-820 1-266 (331)
240 cd05110 PTKc_HER4 Catalytic do 100.0 9.1E-34 2E-38 301.3 16.2 261 530-828 6-272 (303)
241 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.5E-34 5.4E-39 298.3 11.5 240 537-821 1-257 (258)
242 cd08227 PK_STRAD_alpha Pseudok 100.0 1.1E-33 2.4E-38 304.0 16.9 261 535-820 2-307 (327)
243 cd05050 PTKc_Musk Catalytic do 100.0 8.9E-34 1.9E-38 299.4 15.9 262 530-823 4-288 (288)
244 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.3E-33 2.8E-38 304.5 17.3 264 531-826 12-295 (334)
245 cd07861 STKc_CDK1_euk Catalyti 100.0 1.2E-33 2.7E-38 298.0 16.7 258 532-819 1-281 (285)
246 cd05047 PTKc_Tie Catalytic dom 100.0 1.7E-33 3.7E-38 294.1 17.4 254 537-825 1-269 (270)
247 cd06631 STKc_YSK4 Catalytic do 100.0 1.7E-33 3.7E-38 293.5 17.3 255 532-819 1-261 (265)
248 cd05085 PTKc_Fer Catalytic dom 100.0 1.7E-33 3.8E-38 290.7 17.2 247 537-822 1-249 (250)
249 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.3E-33 5E-38 295.9 18.5 262 531-820 1-266 (287)
250 cd08221 STKc_Nek9 Catalytic do 100.0 2E-33 4.4E-38 291.3 17.7 251 532-820 1-253 (256)
251 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.4E-33 3.1E-38 299.7 16.9 268 530-829 5-297 (301)
252 KOG0586 Serine/threonine prote 100.0 7.9E-34 1.7E-38 299.2 14.6 249 528-820 53-306 (596)
253 cd06642 STKc_STK25-YSK1 Cataly 100.0 8.7E-34 1.9E-38 297.7 14.9 248 532-820 5-253 (277)
254 cd06651 STKc_MEKK3 Catalytic d 100.0 3.1E-33 6.6E-38 291.6 18.9 254 531-819 2-260 (266)
255 cd00192 PTKc Catalytic domain 100.0 2.2E-33 4.8E-38 292.1 17.7 254 537-822 1-262 (262)
256 KOG4645 MAPKKK (MAP kinase kin 100.0 4.7E-35 1E-39 329.6 5.3 258 526-820 1230-1494(1509)
257 cd05623 STKc_MRCK_alpha Cataly 100.0 1.6E-33 3.5E-38 303.1 17.0 256 531-820 1-266 (332)
258 KOG0983 Mitogen-activated prot 100.0 2.3E-34 5E-39 271.8 9.0 252 532-820 93-349 (391)
259 cd05073 PTKc_Hck Catalytic dom 100.0 2.3E-33 4.9E-38 291.5 17.3 255 529-823 4-259 (260)
260 cd06609 STKc_MST3_like Catalyt 100.0 2.2E-33 4.9E-38 294.1 17.4 250 531-820 1-251 (274)
261 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.8E-33 4E-38 296.8 16.6 255 531-820 1-262 (286)
262 cd07868 STKc_CDK8 Catalytic do 100.0 4.1E-33 8.8E-38 298.7 19.4 202 536-761 6-217 (317)
263 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.7E-33 5.8E-38 295.6 17.6 257 531-819 1-282 (286)
264 cd05040 PTKc_Ack_like Catalyti 100.0 2.5E-33 5.4E-38 290.8 17.0 251 537-822 1-256 (257)
265 cd06630 STKc_MEKK1 Catalytic d 100.0 2.7E-33 6E-38 292.5 17.4 256 532-819 1-263 (268)
266 PHA03207 serine/threonine kina 100.0 1.2E-33 2.5E-38 310.8 15.3 255 530-820 91-375 (392)
267 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2.5E-33 5.5E-38 292.8 17.0 257 537-822 1-268 (269)
268 KOG0986 G protein-coupled rece 100.0 2.1E-34 4.5E-39 290.5 8.0 248 530-814 184-435 (591)
269 cd06652 STKc_MEKK2 Catalytic d 100.0 4.6E-33 1E-37 290.2 18.3 255 531-820 2-261 (265)
270 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 3.1E-33 6.7E-38 290.5 16.9 238 537-821 1-258 (259)
271 cd06608 STKc_myosinIII_like Ca 100.0 3.3E-33 7.1E-38 293.2 17.1 262 528-819 3-271 (275)
272 cd05112 PTKc_Itk Catalytic dom 100.0 3.3E-33 7.1E-38 289.8 16.7 251 531-821 4-255 (256)
273 cd05046 PTK_CCK4 Pseudokinase 100.0 2.8E-33 6E-38 293.6 16.3 260 531-822 5-274 (275)
274 cd08218 STKc_Nek1 Catalytic do 100.0 2.7E-33 6E-38 290.3 16.0 251 532-820 1-253 (256)
275 cd05044 PTKc_c-ros Catalytic d 100.0 2.4E-33 5.1E-38 293.2 15.5 255 537-823 1-269 (269)
276 cd08220 STKc_Nek8 Catalytic do 100.0 3.9E-33 8.5E-38 289.2 17.0 250 532-820 1-253 (256)
277 cd05041 PTKc_Fes_like Catalyti 100.0 4E-33 8.6E-38 288.2 17.0 248 537-822 1-250 (251)
278 cd08217 STKc_Nek2 Catalytic do 100.0 3.4E-33 7.4E-38 291.3 16.6 255 532-820 1-262 (265)
279 cd06658 STKc_PAK5 Catalytic do 100.0 1.4E-33 3.1E-38 297.8 13.7 249 533-820 24-272 (292)
280 cd06647 STKc_PAK_I Catalytic d 100.0 4.3E-33 9.4E-38 294.4 17.4 252 530-820 18-269 (293)
281 cd05083 PTKc_Chk Catalytic dom 100.0 3.6E-33 7.7E-38 289.0 16.0 247 531-823 6-253 (254)
282 KOG0199 ACK and related non-re 100.0 4E-34 8.6E-39 301.8 8.8 255 532-821 111-369 (1039)
283 cd05574 STKc_phototropin_like 100.0 5.5E-33 1.2E-37 297.5 17.8 260 531-819 1-288 (316)
284 smart00219 TyrKc Tyrosine kina 100.0 5.4E-33 1.2E-37 288.5 17.0 252 533-821 1-258 (258)
285 cd05042 PTKc_Aatyk Catalytic d 100.0 4.1E-33 8.9E-38 291.2 16.0 257 537-822 1-268 (269)
286 cd06629 STKc_MAPKKK_Bck1_like 100.0 6.5E-33 1.4E-37 290.3 17.5 256 532-820 2-269 (272)
287 cd06659 STKc_PAK6 Catalytic do 100.0 2.5E-33 5.5E-38 296.7 14.1 249 533-820 23-271 (297)
288 cd05074 PTKc_Tyro3 Catalytic d 100.0 7.7E-33 1.7E-37 290.0 17.6 265 533-824 1-272 (273)
289 cd06605 PKc_MAPKK Catalytic do 100.0 3.3E-33 7.2E-38 291.4 14.7 255 531-820 1-257 (265)
290 cd07839 STKc_CDK5 Catalytic do 100.0 3.5E-33 7.7E-38 294.3 14.7 256 532-819 1-280 (284)
291 KOG0662 Cyclin-dependent kinas 100.0 2.3E-33 4.9E-38 248.6 10.9 195 531-747 2-199 (292)
292 cd05609 STKc_MAST Catalytic do 100.0 6.4E-33 1.4E-37 295.2 16.7 263 531-823 1-273 (305)
293 cd07833 STKc_CDKL Catalytic do 100.0 5.7E-33 1.2E-37 293.5 16.1 258 531-819 1-284 (288)
294 cd05580 STKc_PKA Catalytic dom 100.0 6E-33 1.3E-37 293.2 16.2 245 531-819 1-253 (290)
295 KOG1035 eIF-2alpha kinase GCN2 100.0 1E-33 2.3E-38 317.4 10.9 268 527-819 475-870 (1351)
296 cd06623 PKc_MAPKK_plant_like C 100.0 1.1E-32 2.3E-37 287.4 17.8 252 531-820 1-256 (264)
297 cd06632 STKc_MEKK1_plant Catal 100.0 8E-33 1.7E-37 287.3 16.6 248 532-819 1-254 (258)
298 cd07846 STKc_CDKL2_3 Catalytic 100.0 3E-33 6.5E-38 295.2 13.6 257 531-819 1-282 (286)
299 cd06617 PKc_MKK3_6 Catalytic d 100.0 9.2E-33 2E-37 291.0 17.1 255 531-820 1-261 (283)
300 cd05578 STKc_Yank1 Catalytic d 100.0 4.4E-33 9.6E-38 289.1 14.3 248 532-818 1-253 (258)
301 cd07849 STKc_ERK1_2_like Catal 100.0 7.5E-33 1.6E-37 298.8 16.2 265 530-820 4-292 (336)
302 KOG4250 TANK binding protein k 100.0 3.5E-33 7.6E-38 298.1 13.4 270 531-826 13-312 (732)
303 cd07844 STKc_PCTAIRE_like Cata 100.0 1.4E-32 2.9E-37 290.9 17.9 257 531-819 5-287 (291)
304 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.1E-32 4.5E-37 285.7 18.9 261 531-819 1-263 (267)
305 cd07841 STKc_CDK7 Catalytic do 100.0 1E-32 2.2E-37 293.0 16.7 257 532-820 1-282 (298)
306 cd07867 STKc_CDC2L6 Catalytic 100.0 1.5E-32 3.2E-37 294.5 18.0 201 537-761 7-217 (317)
307 cd06626 STKc_MEKK4 Catalytic d 100.0 2.2E-32 4.8E-37 285.0 18.6 255 532-819 1-260 (264)
308 cd06917 STKc_NAK1_like Catalyt 100.0 1.3E-32 2.8E-37 288.9 16.9 249 532-820 2-255 (277)
309 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.6E-32 3.4E-37 290.4 17.5 259 529-819 3-287 (291)
310 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.9E-32 4.2E-37 285.8 17.6 256 537-822 1-267 (268)
311 cd06641 STKc_MST3 Catalytic do 100.0 1.8E-32 3.9E-37 287.6 17.4 248 532-820 5-253 (277)
312 cd07832 STKc_CCRK Catalytic do 100.0 2E-32 4.2E-37 289.0 17.3 258 532-820 1-282 (286)
313 cd06607 STKc_TAO Catalytic dom 100.0 2.2E-32 4.8E-37 291.4 17.6 247 531-820 15-267 (307)
314 PHA02882 putative serine/threo 100.0 1.4E-32 3E-37 290.6 15.9 265 531-821 12-293 (294)
315 cd05633 STKc_GRK3 Catalytic do 100.0 1.8E-32 3.9E-37 287.4 16.4 243 538-820 1-255 (279)
316 cd06648 STKc_PAK_II Catalytic 100.0 2.1E-32 4.6E-37 288.0 17.0 250 532-820 20-269 (285)
317 cd08528 STKc_Nek10 Catalytic d 100.0 1.8E-32 3.9E-37 286.5 16.1 255 532-822 1-268 (269)
318 KOG4236 Serine/threonine prote 100.0 2.8E-33 6.1E-38 286.1 9.6 246 536-820 569-819 (888)
319 cd07860 STKc_CDK2_3 Catalytic 100.0 1.7E-32 3.7E-37 289.1 16.0 257 532-819 1-280 (284)
320 KOG0666 Cyclin C-dependent kin 100.0 1.8E-33 4E-38 270.4 7.6 204 529-746 22-236 (438)
321 KOG0587 Traf2- and Nck-interac 100.0 2.2E-32 4.7E-37 297.5 16.6 268 521-820 9-282 (953)
322 KOG0690 Serine/threonine prote 100.0 1.9E-33 4.1E-38 271.6 7.3 250 529-819 166-423 (516)
323 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.8E-32 4E-37 295.7 15.5 267 530-824 4-297 (337)
324 cd07850 STKc_JNK Catalytic dom 100.0 4.4E-32 9.4E-37 294.8 18.4 261 529-820 14-311 (353)
325 PHA03390 pk1 serine/threonine- 100.0 5.5E-32 1.2E-36 281.8 18.1 250 522-819 5-261 (267)
326 cd07855 STKc_ERK5 Catalytic do 100.0 2.1E-32 4.6E-37 295.0 15.5 265 531-820 5-294 (334)
327 cd07837 STKc_CdkB_plant Cataly 100.0 4.1E-32 8.9E-37 287.9 17.3 267 531-820 1-291 (295)
328 cd07843 STKc_CDC2L1 Catalytic 100.0 3.3E-32 7.2E-37 288.2 16.4 261 530-820 4-290 (293)
329 cd08225 STKc_Nek5 Catalytic do 100.0 2.3E-32 5E-37 283.6 14.8 251 532-820 1-254 (257)
330 cd06614 STKc_PAK Catalytic dom 100.0 5.1E-32 1.1E-36 285.7 17.6 255 528-820 16-270 (286)
331 KOG0669 Cyclin T-dependent kin 100.0 4E-34 8.7E-39 267.0 1.1 276 531-820 17-315 (376)
332 cd05572 STKc_cGK_PKG Catalytic 100.0 6.7E-32 1.5E-36 280.9 17.9 243 539-819 1-251 (262)
333 cd07842 STKc_CDK8_like Catalyt 100.0 6.2E-32 1.3E-36 289.6 17.8 266 532-820 1-313 (316)
334 cd07835 STKc_CDK1_like Catalyt 100.0 4.1E-32 8.9E-37 286.0 16.1 256 533-819 1-279 (283)
335 cd06616 PKc_MKK4 Catalytic dom 100.0 2.1E-32 4.6E-37 289.0 13.9 255 532-820 5-267 (288)
336 cd06653 STKc_MEKK3_like_1 Cata 100.0 7.4E-32 1.6E-36 280.8 17.3 254 531-819 2-260 (264)
337 cd07845 STKc_CDK10 Catalytic d 100.0 8.7E-32 1.9E-36 287.1 17.9 261 530-820 6-290 (309)
338 cd07865 STKc_CDK9 Catalytic do 100.0 1.2E-31 2.5E-36 286.7 18.8 268 529-819 10-306 (310)
339 cd06657 STKc_PAK4 Catalytic do 100.0 4.7E-32 1E-36 286.0 15.5 246 536-820 25-270 (292)
340 cd06627 STKc_Cdc7_like Catalyt 100.0 8.8E-32 1.9E-36 278.7 16.8 248 532-819 1-250 (254)
341 cd07836 STKc_Pho85 Catalytic d 100.0 1.2E-31 2.5E-36 282.8 17.9 258 532-819 1-280 (284)
342 cd05577 STKc_GRK Catalytic dom 100.0 9.7E-32 2.1E-36 282.0 17.0 244 539-819 1-253 (277)
343 cd08215 STKc_Nek Catalytic dom 100.0 1.1E-31 2.4E-36 278.6 17.1 253 532-820 1-255 (258)
344 cd05122 PKc_STE Catalytic doma 100.0 1.1E-31 2.4E-36 277.6 17.0 250 532-819 1-250 (253)
345 cd08226 PK_STRAD_beta Pseudoki 100.0 1.4E-31 3E-36 287.8 18.3 259 537-820 4-308 (328)
346 KOG1025 Epidermal growth facto 100.0 8.8E-33 1.9E-37 296.7 8.8 258 533-827 698-960 (1177)
347 cd07834 STKc_MAPK Catalytic do 100.0 6.5E-32 1.4E-36 291.2 15.7 269 532-825 1-296 (330)
348 cd06635 STKc_TAO1 Catalytic do 100.0 1.7E-31 3.8E-36 285.6 18.5 247 533-822 27-279 (317)
349 KOG0618 Serine/threonine phosp 100.0 5.2E-35 1.1E-39 319.1 -8.8 420 3-452 2-465 (1081)
350 cd08530 STKc_CNK2-like Catalyt 100.0 7.2E-32 1.6E-36 279.7 14.9 251 532-820 1-253 (256)
351 cd06606 STKc_MAPKKK Catalytic 100.0 1.8E-31 3.9E-36 277.3 17.8 254 532-819 1-256 (260)
352 cd08216 PK_STRAD Pseudokinase 100.0 1.6E-31 3.4E-36 286.0 17.8 260 536-820 7-295 (314)
353 cd05606 STKc_beta_ARK Catalyti 100.0 1.6E-31 3.6E-36 280.2 17.6 243 538-820 1-255 (278)
354 KOG1006 Mitogen-activated prot 100.0 8E-34 1.7E-38 267.3 -0.1 255 536-820 69-327 (361)
355 PHA03210 serine/threonine kina 100.0 4.1E-32 8.9E-37 306.2 13.7 265 529-820 146-454 (501)
356 cd07840 STKc_CDK9_like Catalyt 100.0 1.6E-31 3.4E-36 282.3 17.3 259 533-820 1-284 (287)
357 PLN00009 cyclin-dependent kina 100.0 1.4E-31 2.9E-36 283.7 16.7 259 531-820 2-284 (294)
358 cd07831 STKc_MOK Catalytic dom 100.0 2E-31 4.4E-36 280.6 17.5 256 533-820 1-279 (282)
359 cd07864 STKc_CDK12 Catalytic d 100.0 2.1E-31 4.6E-36 283.4 17.5 266 528-819 4-298 (302)
360 cd07854 STKc_MAPK4_6 Catalytic 100.0 8.8E-32 1.9E-36 290.9 14.6 264 531-820 5-300 (342)
361 cd05611 STKc_Rim15_like Cataly 100.0 1.1E-31 2.5E-36 278.8 15.0 244 537-821 2-249 (260)
362 cd07879 STKc_p38delta_MAPK13 C 100.0 2.2E-31 4.8E-36 287.8 17.3 263 530-825 14-304 (342)
363 cd05579 STKc_MAST_like Catalyt 100.0 8.9E-32 1.9E-36 280.6 13.5 252 539-821 1-255 (265)
364 cd07852 STKc_MAPK15 Catalytic 100.0 2.8E-31 6E-36 286.8 17.7 265 529-820 5-295 (337)
365 cd07838 STKc_CDK4_6_like Catal 100.0 6.7E-31 1.4E-35 277.5 20.0 258 533-819 1-283 (287)
366 KOG0671 LAMMER dual specificit 100.0 9.7E-32 2.1E-36 267.0 12.6 266 530-820 88-406 (415)
367 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 2E-31 4.3E-36 286.0 16.1 260 525-820 4-288 (328)
368 cd05581 STKc_PDK1 Catalytic do 100.0 9.5E-32 2.1E-36 282.9 13.3 256 531-819 1-276 (280)
369 cd06618 PKc_MKK7 Catalytic dom 100.0 2E-31 4.2E-36 282.6 15.7 254 530-820 14-273 (296)
370 cd05118 STKc_CMGC Catalytic do 100.0 2.6E-31 5.6E-36 280.0 16.2 255 533-819 1-279 (283)
371 cd07857 STKc_MPK1 Catalytic do 100.0 3.1E-31 6.8E-36 285.6 17.1 264 532-820 1-292 (332)
372 cd07866 STKc_BUR1 Catalytic do 100.0 2.7E-31 5.7E-36 284.1 16.4 271 530-819 7-307 (311)
373 KOG0612 Rho-associated, coiled 100.0 1.5E-32 3.2E-37 305.7 6.7 261 523-820 67-338 (1317)
374 PTZ00024 cyclin-dependent prot 100.0 3.6E-31 7.9E-36 285.8 17.5 265 531-820 8-313 (335)
375 cd06634 STKc_TAO2 Catalytic do 100.0 4.5E-31 9.8E-36 281.2 17.2 247 532-821 16-268 (308)
376 cd07880 STKc_p38gamma_MAPK12 C 100.0 3.2E-31 6.9E-36 286.5 16.0 262 527-820 11-298 (343)
377 cd06633 STKc_TAO3 Catalytic do 100.0 8.9E-31 1.9E-35 279.5 18.5 245 533-820 23-273 (313)
378 KOG0607 MAP kinase-interacting 100.0 1.8E-31 3.9E-36 257.6 11.6 265 523-819 75-360 (463)
379 cd07830 STKc_MAK_like Catalyti 100.0 5.6E-31 1.2E-35 277.4 16.4 256 533-820 1-280 (283)
380 KOG1151 Tousled-like protein k 100.0 6.3E-32 1.4E-36 270.9 8.1 264 531-819 463-740 (775)
381 cd07877 STKc_p38alpha_MAPK14 C 100.0 9.5E-31 2.1E-35 283.0 17.9 266 523-820 9-300 (345)
382 cd05583 STKc_MSK_N N-terminal 100.0 4.9E-31 1.1E-35 278.5 15.0 255 532-824 1-267 (288)
383 cd05613 STKc_MSK1_N N-terminal 100.0 8.6E-31 1.9E-35 276.9 16.2 251 532-820 1-268 (290)
384 cd08222 STKc_Nek11 Catalytic d 100.0 5.5E-31 1.2E-35 273.7 14.0 252 532-820 1-257 (260)
385 cd05610 STKc_MASTL Catalytic d 100.0 9.2E-31 2E-35 304.3 16.7 147 530-690 3-152 (669)
386 cd07829 STKc_CDK_like Catalyti 100.0 1.1E-30 2.4E-35 275.1 14.9 255 533-819 1-278 (282)
387 cd07851 STKc_p38 Catalytic dom 100.0 1.1E-30 2.4E-35 282.5 14.3 260 529-820 13-298 (343)
388 KOG0200 Fibroblast/platelet-de 100.0 1.1E-30 2.4E-35 298.5 13.8 269 526-825 291-580 (609)
389 cd05123 STKc_AGC Catalytic dom 100.0 4.1E-30 8.8E-35 265.6 16.6 237 539-816 1-240 (250)
390 KOG0696 Serine/threonine prote 100.0 1.8E-31 3.9E-36 265.5 6.0 242 530-812 348-593 (683)
391 KOG4237 Extracellular matrix p 100.0 1.5E-32 3.4E-37 272.7 -2.6 412 4-426 51-498 (498)
392 cd05576 STKc_RPK118_like Catal 100.0 4.2E-30 9.2E-35 262.6 14.0 220 542-814 4-223 (237)
393 KOG0576 Mitogen-activated prot 100.0 3.9E-31 8.4E-36 278.8 6.3 254 530-819 14-270 (829)
394 KOG0695 Serine/threonine prote 100.0 2.1E-30 4.5E-35 251.3 8.3 250 530-812 249-502 (593)
395 KOG0984 Mitogen-activated prot 100.0 2.6E-30 5.7E-35 234.8 7.7 208 526-762 41-254 (282)
396 KOG0603 Ribosomal protein S6 k 100.0 5.1E-30 1.1E-34 272.1 9.6 241 530-820 321-563 (612)
397 KOG1290 Serine/threonine prote 100.0 2.6E-29 5.6E-34 256.3 13.7 136 531-675 78-221 (590)
398 PLN03225 Serine/threonine-prot 100.0 3.9E-29 8.4E-34 283.0 16.6 267 529-820 130-450 (566)
399 KOG1027 Serine/threonine prote 100.0 1.4E-29 3.1E-34 274.4 11.3 250 533-820 511-767 (903)
400 KOG0614 cGMP-dependent protein 100.0 7.8E-31 1.7E-35 267.7 -0.3 250 531-820 420-677 (732)
401 KOG0608 Warts/lats-like serine 100.0 3.9E-29 8.4E-34 261.3 11.6 210 531-764 629-875 (1034)
402 PLN03224 probable serine/threo 100.0 2.7E-28 5.9E-33 268.3 16.4 282 529-820 143-500 (507)
403 KOG4237 Extracellular matrix p 100.0 9.9E-31 2.1E-35 259.9 -3.3 388 2-402 70-498 (498)
404 smart00220 S_TKc Serine/Threon 100.0 2.9E-28 6.3E-33 250.3 14.8 239 543-819 1-240 (244)
405 KOG1024 Receptor-like protein 100.0 2.1E-28 4.6E-33 242.5 12.5 274 523-827 276-558 (563)
406 KOG1152 Signal transduction se 100.0 9.4E-29 2E-33 256.6 9.7 191 529-743 559-762 (772)
407 KOG0664 Nemo-like MAPK-related 100.0 6E-30 1.3E-34 241.6 -0.1 197 532-745 54-253 (449)
408 KOG0670 U4/U6-associated splic 99.9 1.4E-27 2.9E-32 244.8 8.6 278 520-820 421-746 (752)
409 KOG0668 Casein kinase II, alph 99.9 6.5E-28 1.4E-32 222.5 4.8 187 529-742 36-225 (338)
410 KOG1345 Serine/threonine kinas 99.9 3.1E-27 6.7E-32 223.6 9.2 254 531-821 24-285 (378)
411 cd00180 PKc Catalytic domain o 99.9 5.8E-26 1.2E-30 227.7 17.6 211 539-820 1-214 (215)
412 KOG0665 Jun-N-terminal kinase 99.9 5E-27 1.1E-31 228.0 6.6 192 531-744 17-211 (369)
413 KOG1167 Serine/threonine prote 99.9 3.7E-26 8.1E-31 230.9 11.8 276 526-820 31-381 (418)
414 PRK09188 serine/threonine prot 99.9 4.1E-25 8.9E-30 232.9 14.1 185 525-734 12-210 (365)
415 PLN03210 Resistant to P. syrin 99.9 5.1E-24 1.1E-28 262.0 25.7 339 15-403 550-904 (1153)
416 PRK15387 E3 ubiquitin-protein 99.9 1.2E-24 2.7E-29 247.2 16.5 262 2-340 204-465 (788)
417 PLN03210 Resistant to P. syrin 99.9 1.4E-23 3E-28 258.2 25.8 306 97-426 590-903 (1153)
418 PRK15387 E3 ubiquitin-protein 99.9 2.7E-24 5.8E-29 244.5 16.9 265 48-389 202-466 (788)
419 smart00221 STYKc Protein kinas 99.9 9E-24 2E-28 214.2 15.2 199 533-761 1-201 (225)
420 KOG1165 Casein kinase (serine/ 99.9 6.5E-23 1.4E-27 200.0 15.8 269 531-827 28-302 (449)
421 KOG1164 Casein kinase (serine/ 99.9 7.9E-23 1.7E-27 217.6 17.8 269 532-827 19-300 (322)
422 KOG1163 Casein kinase (serine/ 99.9 3.3E-23 7.1E-28 193.1 11.3 271 529-827 13-287 (341)
423 PLN00181 protein SPA1-RELATED; 99.9 1.1E-23 2.3E-28 252.0 6.9 208 584-820 28-265 (793)
424 smart00750 KIND kinase non-cat 99.9 2.4E-22 5.3E-27 195.1 10.1 169 618-826 1-171 (176)
425 PRK15370 E3 ubiquitin-protein 99.9 2.9E-22 6.2E-27 229.9 12.0 139 24-187 179-317 (754)
426 KOG0590 Checkpoint kinase and 99.9 6.3E-23 1.4E-27 231.1 6.4 258 534-820 321-585 (601)
427 PRK15370 E3 ubiquitin-protein 99.9 3.4E-22 7.4E-27 229.3 11.5 247 47-357 178-428 (754)
428 cd05147 RIO1_euk RIO kinase fa 99.9 1.2E-21 2.7E-26 190.3 12.3 141 536-694 2-169 (190)
429 cd05145 RIO1_like RIO kinase f 99.8 1.4E-20 3E-25 184.0 14.6 140 536-694 2-169 (190)
430 KOG0195 Integrin-linked kinase 99.8 2.3E-22 4.9E-27 190.5 1.8 248 534-825 193-447 (448)
431 PRK10359 lipopolysaccharide co 99.8 1.8E-20 4E-25 183.1 11.2 170 530-739 30-211 (232)
432 PRK10345 hypothetical protein; 99.8 1.5E-19 3.3E-24 176.8 14.2 140 533-689 4-156 (210)
433 COG0515 SPS1 Serine/threonine 99.8 7.5E-19 1.6E-23 190.4 17.5 262 533-820 2-275 (384)
434 PRK12274 serine/threonine prot 99.8 3.6E-19 7.9E-24 169.6 10.9 191 533-761 4-208 (218)
435 KOG4158 BRPK/PTEN-induced prot 99.8 9.6E-20 2.1E-24 181.9 5.9 206 586-821 274-511 (598)
436 KOG0617 Ras suppressor protein 99.8 3E-21 6.4E-26 170.7 -4.5 177 246-452 32-212 (264)
437 smart00090 RIO RIO-like kinase 99.8 1.3E-18 2.8E-23 174.9 13.2 144 532-694 29-200 (237)
438 cd00116 LRR_RI Leucine-rich re 99.8 1.2E-20 2.5E-25 202.5 -1.9 154 3-157 2-178 (319)
439 cd00116 LRR_RI Leucine-rich re 99.8 4.4E-20 9.5E-25 198.0 -0.7 285 75-403 2-318 (319)
440 KOG0617 Ras suppressor protein 99.8 2.5E-20 5.5E-25 164.8 -2.7 165 218-389 28-193 (264)
441 KOG1240 Protein kinase contain 99.8 1.7E-19 3.6E-24 201.6 2.1 255 532-823 24-294 (1431)
442 PF14531 Kinase-like: Kinase-l 99.7 4.5E-18 9.7E-23 171.5 7.2 240 533-811 14-288 (288)
443 KOG1166 Mitotic checkpoint ser 99.7 1.6E-17 3.4E-22 190.5 12.2 254 525-826 692-955 (974)
444 KOG1023 Natriuretic peptide re 99.7 1.3E-17 2.7E-22 178.9 9.7 216 582-826 1-226 (484)
445 PRK14879 serine/threonine prot 99.7 5.3E-17 1.2E-21 162.5 13.6 134 537-691 2-143 (211)
446 cd05144 RIO2_C RIO kinase fami 99.7 6.2E-17 1.3E-21 159.8 13.0 144 526-694 10-177 (198)
447 PRK09605 bifunctional UGMP fam 99.7 1.6E-16 3.5E-21 180.9 16.0 140 527-691 329-476 (535)
448 TIGR03724 arch_bud32 Kae1-asso 99.7 1.7E-16 3.7E-21 157.3 12.6 130 538-691 1-138 (199)
449 KOG0603 Ribosomal protein S6 k 99.7 5E-18 1.1E-22 181.3 1.1 225 539-814 2-232 (612)
450 KOG1033 eIF-2alpha kinase PEK/ 99.6 2.4E-17 5.2E-22 172.7 1.3 249 532-817 245-509 (516)
451 cd05119 RIO RIO kinase family, 99.6 1.1E-15 2.4E-20 149.8 11.4 137 536-694 2-166 (187)
452 PRK01723 3-deoxy-D-manno-octul 99.6 8.4E-15 1.8E-19 147.8 14.3 138 537-691 37-191 (239)
453 cd05120 APH_ChoK_like Aminogly 99.6 1.2E-14 2.5E-19 137.3 13.2 135 535-691 2-138 (155)
454 KOG0606 Microtubule-associated 99.6 3.3E-16 7.2E-21 175.6 2.7 215 531-812 83-304 (1205)
455 KOG0590 Checkpoint kinase and 99.5 2.6E-15 5.6E-20 169.7 0.5 257 530-819 19-285 (601)
456 PLN03150 hypothetical protein; 99.5 1.2E-13 2.6E-18 159.0 11.4 118 345-465 419-538 (623)
457 KOG0532 Leucine-rich repeat (L 99.5 1.9E-15 4E-20 158.4 -4.9 178 224-412 76-253 (722)
458 KOG0532 Leucine-rich repeat (L 99.5 7.1E-15 1.5E-19 154.2 -0.6 182 172-365 73-254 (722)
459 COG4886 Leucine-rich repeat (L 99.5 1.2E-13 2.6E-18 152.3 8.8 195 75-286 97-292 (394)
460 TIGR01982 UbiB 2-polyprenylphe 99.5 3.3E-13 7.2E-18 148.2 12.0 143 536-694 122-309 (437)
461 COG4886 Leucine-rich repeat (L 99.4 1.4E-13 3.1E-18 151.7 8.8 243 49-313 49-295 (394)
462 PRK04750 ubiB putative ubiquin 99.4 6.5E-13 1.4E-17 147.1 10.6 150 529-695 118-317 (537)
463 KOG1266 Protein kinase [Signal 99.4 9.2E-13 2E-17 129.5 6.9 214 579-821 118-332 (458)
464 cd05146 RIO3_euk RIO kinase fa 99.3 1.8E-11 3.8E-16 117.5 13.9 139 536-694 2-176 (197)
465 KOG0601 Cyclin-dependent kinas 99.3 2E-12 4.2E-17 139.1 7.0 247 532-819 115-378 (524)
466 PF14580 LRR_9: Leucine-rich r 99.3 2.1E-12 4.6E-17 121.3 5.1 127 19-150 15-146 (175)
467 cd05151 ChoK Choline Kinase (C 99.3 2E-11 4.3E-16 117.6 11.8 131 536-691 3-136 (170)
468 PF14580 LRR_9: Leucine-rich r 99.3 1.1E-12 2.5E-17 123.1 2.8 130 43-181 15-147 (175)
469 KOG3207 Beta-tubulin folding c 99.3 3.9E-13 8.4E-18 137.2 -1.1 210 20-284 118-339 (505)
470 KOG1259 Nischarin, modulator o 99.3 8.7E-13 1.9E-17 127.8 1.0 136 291-433 280-416 (490)
471 KOG0531 Protein phosphatase 1, 99.2 7.9E-13 1.7E-17 145.8 -0.8 247 20-312 69-322 (414)
472 KOG0531 Protein phosphatase 1, 99.2 9.4E-13 2E-17 145.2 -1.0 267 23-337 49-322 (414)
473 PLN03150 hypothetical protein; 99.2 3E-11 6.6E-16 139.2 10.3 112 322-433 420-532 (623)
474 KOG1909 Ran GTPase-activating 99.2 5.1E-13 1.1E-17 132.8 -4.4 138 271-429 157-311 (382)
475 KOG1259 Nischarin, modulator o 99.2 9E-12 2E-16 120.8 2.7 199 243-451 210-411 (490)
476 KOG3207 Beta-tubulin folding c 99.2 6.2E-12 1.3E-16 128.6 1.3 88 94-187 119-210 (505)
477 KOG1909 Ran GTPase-activating 99.2 1.8E-12 3.9E-17 129.0 -3.2 255 19-307 26-310 (382)
478 KOG0601 Cyclin-dependent kinas 99.2 4.4E-11 9.5E-16 128.9 6.9 250 526-822 260-516 (524)
479 COG3642 Mn2+-dependent serine/ 99.1 8.6E-10 1.9E-14 101.4 12.3 129 537-691 2-140 (204)
480 cd05154 ACAD10_11_like Acyl-Co 99.1 8.9E-10 1.9E-14 111.2 13.7 145 537-691 4-206 (223)
481 KOG3087 Serine/threonine prote 99.1 1.2E-09 2.6E-14 99.7 11.5 142 535-690 11-164 (229)
482 PF13855 LRR_8: Leucine rich r 99.0 1.9E-10 4E-15 88.9 4.3 57 73-130 3-59 (61)
483 PF13855 LRR_8: Leucine rich r 99.0 2.7E-10 5.9E-15 87.9 4.7 61 96-156 1-61 (61)
484 PF01163 RIO1: RIO1 family; I 99.0 2.7E-09 5.9E-14 102.2 11.9 126 546-693 1-157 (188)
485 KOG1243 Protein kinase [Genera 99.0 2.4E-09 5.3E-14 116.5 11.5 127 549-693 30-156 (690)
486 COG0478 RIO-like serine/threon 98.9 6.1E-09 1.3E-13 101.8 10.6 137 533-693 93-253 (304)
487 KOG4658 Apoptotic ATPase [Sign 98.9 1.3E-09 2.8E-14 128.3 7.0 129 23-155 523-653 (889)
488 KOG4658 Apoptotic ATPase [Sign 98.9 5.1E-10 1.1E-14 131.6 3.4 125 3-131 527-653 (889)
489 PRK15123 lipopolysaccharide co 98.9 2.7E-08 5.9E-13 101.4 15.5 146 537-691 28-194 (268)
490 KOG3741 Poly(A) ribonuclease s 98.8 3E-08 6.4E-13 104.5 13.3 148 543-694 288-445 (655)
491 KOG0606 Microtubule-associated 98.8 1.2E-09 2.7E-14 123.7 1.4 258 528-815 801-1084(1205)
492 KOG1859 Leucine-rich repeat pr 98.8 1.3E-10 2.7E-15 125.8 -6.5 183 240-432 102-295 (1096)
493 KOG1859 Leucine-rich repeat pr 98.7 3.4E-10 7.3E-15 122.5 -7.6 123 325-453 169-293 (1096)
494 PF06293 Kdo: Lipopolysacchari 98.6 3.5E-07 7.5E-12 90.4 13.3 110 572-691 55-170 (206)
495 KOG2137 Protein kinase [Signal 98.6 2.2E-08 4.7E-13 109.7 4.6 157 647-819 107-264 (700)
496 PF06176 WaaY: Lipopolysacchar 98.6 5.1E-07 1.1E-11 87.0 12.5 141 530-690 30-182 (229)
497 KOG2982 Uncharacterized conser 98.6 3.3E-09 7.2E-14 103.3 -2.4 205 71-302 71-286 (418)
498 PRK09902 hypothetical protein; 98.6 9.6E-07 2.1E-11 84.9 14.2 144 538-691 25-179 (216)
499 COG1718 RIO1 Serine/threonine 98.5 7.8E-07 1.7E-11 86.5 12.1 156 519-694 33-218 (268)
500 COG0661 AarF Predicted unusual 98.5 3.1E-07 6.6E-12 101.5 8.1 141 537-694 131-317 (517)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.8e-93 Score=875.45 Aligned_cols=777 Identities=30% Similarity=0.471 Sum_probs=558.0
Q ss_pred CcEEEcCCCcCcccCCccccCCCCCCEEEccCCcccccCCccCCCCCCCCEEEcCCCcccccCCccccCCCCCcEEECCC
Q 040925 1 LQTLAVNDNYLTGQLPDFVGNLSDLEVIRIMGNSLGGKIPTTLGLLRNLVSLNVAENKFSGMFPRSICNISSLELIQLAL 80 (833)
Q Consensus 1 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 80 (833)
|++|+|++|.+++.+|..++++++|++|+|++|.+.+.+|..|+.+++|++|+|++|.+++..|..|.++++|+.|+|++
T Consensus 142 L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~ 221 (968)
T PLN00113 142 LETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGY 221 (968)
T ss_pred CCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcC
Confidence 56778888877777777777777888888877777777777777777777777777777777777777777777777777
Q ss_pred cccccccCchhhcCCCCccEEEccCCcceeeCCccccCCCCCcEEEcccCccccccCcCccCCCcCceEecccccCCCCC
Q 040925 81 NRFSGNLPFDIVVNLPNLKALAIGGNNFFGSIPYSLSNASNLELLDLSVNQFKGNVSIDFSSLKNLLWLNLEQNNLGTGT 160 (833)
Q Consensus 81 N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 160 (833)
|++++.+|. .|.++++|++|+|++|.+++..|..|+++++|++|+|++|++.+..+..|.++++|++|+|++|.+....
T Consensus 222 n~l~~~~p~-~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~ 300 (968)
T PLN00113 222 NNLSGEIPY-EIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEI 300 (968)
T ss_pred CccCCcCCh-hHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCC
Confidence 777655554 3467777777777777777667777777777777777777776666666667777777777777665321
Q ss_pred CCCc------------------ccccccCCCCCCCEEEccCCcCcccCChhHhhhcccccEEEccCccccccCChhhhcC
Q 040925 161 ATDL------------------DFVTFLTNCSSLKALSLADNQFGGELPHSIANLSSTVINFGIGRNQISGTIPPGIRNL 222 (833)
Q Consensus 161 ~~~~------------------~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l 222 (833)
+..+ ..+..+..+++|+.|+|++|++++.+|..+..+. .++.|++++|++++..|..+..+
T Consensus 301 p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~-~L~~L~Ls~n~l~~~~p~~~~~~ 379 (968)
T PLN00113 301 PELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHN-NLTVLDLSTNNLTGEIPEGLCSS 379 (968)
T ss_pred ChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCC-CCcEEECCCCeeEeeCChhHhCc
Confidence 1100 0112234445555555555555555555544442 25555555555555555555555
Q ss_pred CCCCeEeccCCcccccCCccccCCCCCCEEEcccccCcccCCccccCCCCCCeEEeecccccCCCCCCCCCCCccceeec
Q 040925 223 VNLIGFGAEENQLHGTIPDAIGELKNLQKLCLFRNFLQGRIPSGLGNLTKLANLELSSNSLQGNIPSSLGNCQNLMSFTA 302 (833)
Q Consensus 223 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 302 (833)
.+|+.|++++|++.+..|..+..+++|+.|+|++|.+++..|..|..+++|+.|+|++|++.+.+|..+..+++|+.|++
T Consensus 380 ~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 459 (968)
T PLN00113 380 GNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSL 459 (968)
T ss_pred CCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEEC
Confidence 66666666666666666666666777777777777777777777777777777777777777777777777778888888
Q ss_pred CCceecccCCcccccccccceeeecCCCccCCCCCcccccCCCcCEEeccCCcCCCCCCccccCCCCCcEEeecCCcccc
Q 040925 303 SQNKLTGALPHQLLSITTLSLYLDLSNNLLNGSLPLQVGHLKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFHG 382 (833)
Q Consensus 303 ~~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 382 (833)
++|++.+.+|..+ ....+ +.|++++|++++..|..|.++++|+.|+|++|++++.+|..+..+++|++|+|++|.+++
T Consensus 460 ~~n~~~~~~p~~~-~~~~L-~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 537 (968)
T PLN00113 460 ARNKFFGGLPDSF-GSKRL-ENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSG 537 (968)
T ss_pred cCceeeeecCccc-ccccc-eEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccc
Confidence 8888776666644 33444 789999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccccCCCCCCeEEccCcccCCCchhhhcCCCCCceEECccCcCccccCCCCccCCCccccccCCcCCCCCcccCCCC
Q 040925 383 VIPLSLSFLKSIKELNVSSNNLSGQIPEFLKNLSVLEFLSLSYNHFEGEVPTKGVFSNKTKISLQGNMKLCGGIDELHLP 462 (833)
Q Consensus 383 ~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~l~~N~~~c~~~~~~~~~ 462 (833)
..|..|..+++|+.|+|++|++++.+|..+.++++|+.|++++|++++.+|..+.+.......+.||+..||+.+....+
T Consensus 538 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~ 617 (968)
T PLN00113 538 QIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLP 617 (968)
T ss_pred cCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCC
Confidence 99999999999999999999999999999999999999999999999999998888888888999999999987665667
Q ss_pred CCCCCCCCCcceeEEEEeehhhhhHHHHHHHHHHHHHhhhccc-ccccCC-Cc-ccC------CCCccchHHHHHHhcCC
Q 040925 463 SCPSKGSRKPKIILLKVLIPVAVSSLILSSCLTIVYARKRRSA-QKFVDT-SP-MEK------QFPMVSYAELSKATGEF 533 (833)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~rrr~~-~~~~~~-~~-~~~------~~~~~~~~~~~~~~~~y 533 (833)
.|..... ....++.+++++++.+++++++++++++++|+.. .+..+. .. .+. ....+++++ ....|
T Consensus 618 ~c~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 692 (968)
T PLN00113 618 PCKRVRK--TPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITIND---ILSSL 692 (968)
T ss_pred CCccccc--cceeeeehhHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccchhhhHHH---HHhhC
Confidence 7743211 1122222222221112222222222222222211 111111 10 000 001122333 34567
Q ss_pred ccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEEE
Q 040925 534 SSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFE 613 (833)
Q Consensus 534 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 613 (833)
...+.||+|+||.||+|++..++..||||+++.... ....|++++++++|||||+++|+|...+ ..++|||
T Consensus 693 ~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~~~-----~~~lv~E 763 (968)
T PLN00113 693 KEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRSEK-----GAYLIHE 763 (968)
T ss_pred CcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEcCC-----CCEEEEe
Confidence 888999999999999999988999999999863322 2245688999999999999999987654 7899999
Q ss_pred ecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccC
Q 040925 614 YMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLS 693 (833)
Q Consensus 614 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 693 (833)
|+++|+|.++++ .++|.++.+++.|+++||+|||+.+.++|+||||||+||+++.++.+++. ||.+....
T Consensus 764 y~~~g~L~~~l~---------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~ 833 (968)
T PLN00113 764 YIEGKNLSEVLR---------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLC 833 (968)
T ss_pred CCCCCcHHHHHh---------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccc
Confidence 999999999995 47899999999999999999996666699999999999999999988875 66554321
Q ss_pred cccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccch--
Q 040925 694 DHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLL-- 771 (833)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~-- 771 (833)
.. ....||+.|||||++.+..++.++|||| +|+++||++++..|+...........
T Consensus 834 ~~------------~~~~~t~~y~aPE~~~~~~~~~~sDv~S----------~Gvvl~el~tg~~p~~~~~~~~~~~~~~ 891 (968)
T PLN00113 834 TD------------TKCFISSAYVAPETRETKDITEKSDIYG----------FGLILIELLTGKSPADAEFGVHGSIVEW 891 (968)
T ss_pred cC------------CCccccccccCcccccCCCCCcccchhh----------HHHHHHHHHhCCCCCCcccCCCCcHHHH
Confidence 11 1125899999999999999999999999 88888888888887642111111110
Q ss_pred -hhhccccc---hhhh---hhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhhh
Q 040925 772 -MEVMTNNS---MIQE---DKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRET 827 (833)
Q Consensus 772 -~~~~~~~~---~~~~---~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~~ 827 (833)
........ ..++ .......+...++.+++.+||+.||++||||+||+++|+++.+.
T Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 892 ARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRS 954 (968)
T ss_pred HHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence 00000000 0000 01112234566788999999999999999999999999998763
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=5e-54 Score=528.03 Aligned_cols=445 Identities=34% Similarity=0.532 Sum_probs=359.3
Q ss_pred CcEEEcCCCcCcccCCccccCCCCCCEEEccCCcccccCCccCCCCCCCCEEEcCCCcccccCCccccCCCCCcEEECCC
Q 040925 1 LQTLAVNDNYLTGQLPDFVGNLSDLEVIRIMGNSLGGKIPTTLGLLRNLVSLNVAENKFSGMFPRSICNISSLELIQLAL 80 (833)
Q Consensus 1 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 80 (833)
|++|+|++|.+++.+|. +.+++|++|+|++|.+++.+|..|+.+++|++|+|++|.+.+..|.+|+++++|++|+|++
T Consensus 120 L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 197 (968)
T PLN00113 120 LRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLAS 197 (968)
T ss_pred CCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccC
Confidence 78999999999988886 5689999999999999989999999999999999999999999999999999999999999
Q ss_pred cccccccCchhhcCCCCccEEEccCCcceeeCCccccCCCCCcEEEcccCccccccCcCccCCCcCceEecccccCCCCC
Q 040925 81 NRFSGNLPFDIVVNLPNLKALAIGGNNFFGSIPYSLSNASNLELLDLSVNQFKGNVSIDFSSLKNLLWLNLEQNNLGTGT 160 (833)
Q Consensus 81 N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 160 (833)
|++++.+|. .|.++++|++|+|++|.+++..|..|+++++|++|+|++|++++..+..|.++++|++|+|++|++....
T Consensus 198 n~l~~~~p~-~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~ 276 (968)
T PLN00113 198 NQLVGQIPR-ELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPI 276 (968)
T ss_pred CCCcCcCCh-HHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccC
Confidence 999866664 5689999999999999999999999999999999999999999889999999999999999999986532
Q ss_pred CCCcccccccCCCCCCCEEEccCCcCcccCChhHhhhcccccEEEccCccccccCChhhhcCCCCCeEeccCCcccccCC
Q 040925 161 ATDLDFVTFLTNCSSLKALSLADNQFGGELPHSIANLSSTVINFGIGRNQISGTIPPGIRNLVNLIGFGAEENQLHGTIP 240 (833)
Q Consensus 161 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 240 (833)
+..+.++++|++|+|++|++.+.+|..+.++.. ++.|++++|.+.+..|..+..+++|+.|++++|.+.+.+|
T Consensus 277 ------p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~-L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p 349 (968)
T PLN00113 277 ------PPSIFSLQKLISLDLSDNSLSGEIPELVIQLQN-LEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIP 349 (968)
T ss_pred ------chhHhhccCcCEEECcCCeeccCCChhHcCCCC-CcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCC
Confidence 344667788888888888887777777766643 6777777777777777777777777777777777777777
Q ss_pred ccccCCCCCCEEEcccccCcccCCccccCCCCCCeEEeecccccCCCCCCCCCCCccceeecCCceecccCCcccccccc
Q 040925 241 DAIGELKNLQKLCLFRNFLQGRIPSGLGNLTKLANLELSSNSLQGNIPSSLGNCQNLMSFTASQNKLTGALPHQLLSITT 320 (833)
Q Consensus 241 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~ 320 (833)
..++.+++|+.|+|++|.+++.+|..+..+++|+.|++++|++.+..|..+..+++|+.|++++|++++.+|..+..++.
T Consensus 350 ~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~ 429 (968)
T PLN00113 350 KNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPL 429 (968)
T ss_pred hHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCC
Confidence 77777777777777777776666666665555555555555555555555555555555555555555545544444433
Q ss_pred c-----------------------ceeeecCCCccCCCCCcccccCCCcCEEeccCCcCCCCCCccccCCCCCcEEeecC
Q 040925 321 L-----------------------SLYLDLSNNLLNGSLPLQVGHLKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISS 377 (833)
Q Consensus 321 l-----------------------l~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 377 (833)
+ ++.|++++|.+.+..|..+ ..++|+.|++++|++++..|..|..+++|+.|+|++
T Consensus 430 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 508 (968)
T PLN00113 430 VYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSE 508 (968)
T ss_pred CCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcC
Confidence 3 1445555555554445443 346777888888888888888899999999999999
Q ss_pred CccccccCccccCCCCCCeEEccCcccCCCchhhhcCCCCCceEECccCcCccccCCC-CccCCCccccccCCcCCCCCc
Q 040925 378 NSFHGVIPLSLSFLKSIKELNVSSNNLSGQIPEFLKNLSVLEFLSLSYNHFEGEVPTK-GVFSNKTKISLQGNMKLCGGI 456 (833)
Q Consensus 378 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~-~~~~~~~~l~l~~N~~~c~~~ 456 (833)
|++.+..|..+..+++|+.|+|++|.+++.+|..+..+++|+.|||++|++++..|.. ..+..+..+++++|+..+.-|
T Consensus 509 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p 588 (968)
T PLN00113 509 NKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588 (968)
T ss_pred CcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCC
Confidence 9999999999999999999999999999999999999999999999999999877764 567889999999998765433
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=7e-47 Score=375.48 Aligned_cols=251 Identities=26% Similarity=0.376 Sum_probs=209.1
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeE
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAF 610 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 610 (833)
+.+..+.||+|..|+||+|.++.+++.+|+|++....+ ...+++.+|++++++.+||+||++||.|+... . .+++
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~---~-~isI 155 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNG---E-EISI 155 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCC---c-eEEe
Confidence 34556899999999999999999999999999964433 34578999999999999999999999987654 1 5999
Q ss_pred EEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhh-cCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 611 VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH-HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 611 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||++|||+++++..+ ++++...-+++.++++||.|||+ + +||||||||+|||++..|+|||||||.+
T Consensus 156 ~mEYMDgGSLd~~~k~~g------~i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDIKPsNlLvNskGeVKicDFGVS 226 (364)
T KOG0581|consen 156 CMEYMDGGSLDDILKRVG------RIPEPVLGKIARAVLRGLSYLHEER---KIIHRDIKPSNLLVNSKGEVKICDFGVS 226 (364)
T ss_pred ehhhcCCCCHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHhhcc---CeeeccCCHHHeeeccCCCEEecccccc
Confidence 999999999999998765 79999999999999999999996 6 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccc--cccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVM--EIVD 767 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~--~~~~ 767 (833)
+.+... ...+++||..|||||.+.+..|+.++|||| +|.++.|++.|++|+... ...+
T Consensus 227 ~~lvnS----------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWS----------LGLsllE~a~GrfP~~~~~~~~~~ 286 (364)
T KOG0581|consen 227 GILVNS----------IANTFVGTSAYMSPERISGESYSVKSDIWS----------LGLSLLELAIGRFPYPPPNPPYLD 286 (364)
T ss_pred HHhhhh----------hcccccccccccChhhhcCCcCCcccceec----------ccHHHHHHhhCCCCCCCcCCCCCC
Confidence 876543 233578999999999999999999999999 899999999999987643 1122
Q ss_pred ccchhhhccccchhhhhhhhchH-HHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 768 PSLLMEVMTNNSMIQEDKRVKTE-ECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.......+-.. .....++ .+++++.+++..|+++||.+|||++|++++
T Consensus 287 ~~~Ll~~Iv~~-----ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 287 IFELLCAIVDE-----PPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred HHHHHHHHhcC-----CCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 22112211111 1111222 478899999999999999999999999876
No 4
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-47 Score=389.70 Aligned_cols=408 Identities=22% Similarity=0.215 Sum_probs=327.9
Q ss_pred CCccccCCCCCCEEEccCCcccccCCccCCCC--CCCCEEEcCCCcccccCCccccCCCCCcEEECCCcccccccCchhh
Q 040925 15 LPDFVGNLSDLEVIRIMGNSLGGKIPTTLGLL--RNLVSLNVAENKFSGMFPRSICNISSLELIQLALNRFSGNLPFDIV 92 (833)
Q Consensus 15 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l--~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 92 (833)
.|....+ .-..|+.++++|..+.-..+..+ ..-+.||+++|+++.+.+..|.++++|+.++|.+|.++ .||...
T Consensus 46 cpa~c~c--~~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~- 121 (873)
T KOG4194|consen 46 CPATCPC--NTRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFG- 121 (873)
T ss_pred CCCcCCC--CceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hccccc-
Confidence 3444444 33456777777744332333222 23455888888887777777788888888888888877 777522
Q ss_pred cCCCCccEEEccCCcceeeCCccccCCCCCcEEEcccCccccccCcCccCCCcCceEecccccCCCCCCCCcccccccCC
Q 040925 93 VNLPNLKALAIGGNNFFGSIPYSLSNASNLELLDLSVNQFKGNVSIDFSSLKNLLWLNLEQNNLGTGTATDLDFVTFLTN 172 (833)
Q Consensus 93 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~ 172 (833)
....+|+.|+|.+|.|+.+....++.++.|+.||||.|.|+.++...|..-.++++|+|++|.|+++.... |.+
T Consensus 122 ~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~------F~~ 195 (873)
T KOG4194|consen 122 HESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGH------FDS 195 (873)
T ss_pred ccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeecccccccccccc------ccc
Confidence 33455888888888887777777777788888888888888777777777777888888888887776643 566
Q ss_pred CCCCCEEEccCCcCcccCChhHhhhcccccEEEccCccccccCChhhhcCCCCCeEeccCCcccccCCccccCCCCCCEE
Q 040925 173 CSSLKALSLADNQFGGELPHSIANLSSTVINFGIGRNQISGTIPPGIRNLVNLIGFGAEENQLHGTIPDAIGELKNLQKL 252 (833)
Q Consensus 173 l~~L~~L~Ls~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 252 (833)
+.+|..|.|+.|+++ .+|...+.-...++.|+|..|+|.-..--+|.+|++|+.|.|..|.+.....++|.++.++++|
T Consensus 196 lnsL~tlkLsrNrit-tLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l 274 (873)
T KOG4194|consen 196 LNSLLTLKLSRNRIT-TLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHL 274 (873)
T ss_pred cchheeeecccCccc-ccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeeccccee
Confidence 777778888888887 5555444433447778888888876667889999999999999999998889999999999999
Q ss_pred EcccccCcccCCccccCCCCCCeEEeecccccCCCCCCCCCCCccceeecCCceecccCCcccccccccceeeecCCCcc
Q 040925 253 CLFRNFLQGRIPSGLGNLTKLANLELSSNSLQGNIPSSLGNCQNLMSFTASQNKLTGALPHQLLSITTLSLYLDLSNNLL 332 (833)
Q Consensus 253 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~ll~~L~ls~N~l 332 (833)
+|+.|+++..-..++.++++|+.|+||+|.|..+.++++.-.++|++|+|+.|+|+ .+++.-+.....++.|+|++|++
T Consensus 275 ~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~-~l~~~sf~~L~~Le~LnLs~Nsi 353 (873)
T KOG4194|consen 275 NLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRIT-RLDEGSFRVLSQLEELNLSHNSI 353 (873)
T ss_pred ecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccc-cCChhHHHHHHHhhhhcccccch
Confidence 99999999888899999999999999999999999999999999999999999999 55554444444448899999999
Q ss_pred CCCCCcccccCCCcCEEeccCCcCCCCCC---ccccCCCCCcEEeecCCccccccCccccCCCCCCeEEccCcccCCCch
Q 040925 333 NGSLPLQVGHLKNLVILDISSNQFSGVIP---GTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNVSSNNLSGQIP 409 (833)
Q Consensus 333 ~~~~~~~~~~l~~L~~L~ls~N~l~~~~~---~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 409 (833)
+.+-..+|..+++|++|||++|.|+..+. ..|.+++.|+.|+|.+|+|..+...+|.++..|+.|||.+|.|.++.|
T Consensus 354 ~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~ 433 (873)
T KOG4194|consen 354 DHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQP 433 (873)
T ss_pred HHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecc
Confidence 98888899999999999999999987655 358999999999999999998888999999999999999999999999
Q ss_pred hhhcCCCCCceEECccCcCccccCCC
Q 040925 410 EFLKNLSVLEFLSLSYNHFEGEVPTK 435 (833)
Q Consensus 410 ~~l~~l~~L~~L~l~~N~l~~~~~~~ 435 (833)
++|..+ .|+.|-+..-.|-|+|...
T Consensus 434 nAFe~m-~Lk~Lv~nSssflCDCql~ 458 (873)
T KOG4194|consen 434 NAFEPM-ELKELVMNSSSFLCDCQLK 458 (873)
T ss_pred cccccc-hhhhhhhcccceEEeccHH
Confidence 999999 8999999998899988754
No 5
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-45 Score=365.26 Aligned_cols=200 Identities=31% Similarity=0.529 Sum_probs=180.8
Q ss_pred HhcCCccCceeccCcceEEEEEEECCCceEEEEEEeecc--CCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCc
Q 040925 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK--YKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTD 606 (833)
Q Consensus 529 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 606 (833)
..++|...+.||+|+||+||+|+++.++..||||.+... .....+.+..|+.+|+.++|||||++++++...+
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~----- 82 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDD----- 82 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCC-----
Confidence 457899999999999999999999999999999999755 3445677899999999999999999999987766
Q ss_pred eEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCC------Cc
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHD------MV 680 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~------~~ 680 (833)
++|+|||||.||||.+|++.++ .+++..++.++.|+|.||++||++ +||||||||+|||++.. -.
T Consensus 83 ~i~lVMEyC~gGDLs~yi~~~~------~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~ 153 (429)
T KOG0595|consen 83 FIYLVMEYCNGGDLSDYIRRRG------RLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPV 153 (429)
T ss_pred eEEEEEEeCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCce
Confidence 9999999999999999999876 799999999999999999999999 99999999999999764 46
Q ss_pred EEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCC
Q 040925 681 AHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPE 760 (833)
Q Consensus 681 ~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~ 760 (833)
+||+|||+|+.+...... ...+|+|.|||||+++.+.|+.|+|+|| .|.++|++++|..|+
T Consensus 154 LKIADFGfAR~L~~~~~a---------~tlcGSplYMAPEV~~~~~YdAKADLWS----------iG~Ilyq~l~g~~Pf 214 (429)
T KOG0595|consen 154 LKIADFGFARFLQPGSMA---------ETLCGSPLYMAPEVIMSQQYDAKADLWS----------IGTILYQCLTGKPPF 214 (429)
T ss_pred EEecccchhhhCCchhHH---------HHhhCCccccCHHHHHhccccchhhHHH----------HHHHHHHHHhCCCCc
Confidence 899999999988764432 3468999999999999999999999999 888999999999887
Q ss_pred c
Q 040925 761 K 761 (833)
Q Consensus 761 ~ 761 (833)
.
T Consensus 215 ~ 215 (429)
T KOG0595|consen 215 D 215 (429)
T ss_pred c
Confidence 6
No 6
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-46 Score=388.79 Aligned_cols=366 Identities=24% Similarity=0.264 Sum_probs=222.8
Q ss_pred EEEccCCcccccCCccCCCCCCCCEEEcCCCcccccCCccccCCCCCcEEECCCcccccccCchhhcCCCCccEEEccCC
Q 040925 27 VIRIMGNSLGGKIPTTLGLLRNLVSLNVAENKFSGMFPRSICNISSLELIQLALNRFSGNLPFDIVVNLPNLKALAIGGN 106 (833)
Q Consensus 27 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N 106 (833)
+|++++|+|..+.+..|-+++||+.++|..|.++ .+|.-.....+|+.|+|.+|.|+ .+..+.++.++.|+.|||+.|
T Consensus 82 ~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~-sv~se~L~~l~alrslDLSrN 159 (873)
T KOG4194|consen 82 TLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLIS-SVTSEELSALPALRSLDLSRN 159 (873)
T ss_pred eeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccc-cccHHHHHhHhhhhhhhhhhc
Confidence 3555555555555555555555555555555554 44443333334555555555554 444444445555555555555
Q ss_pred cceeeCCccccCCCCCcEEEcccCccccccCcCccCCCcCceEecccccCCCCCCCCcccccccCCCCCCCEEEccCCcC
Q 040925 107 NFFGSIPYSLSNASNLELLDLSVNQFKGNVSIDFSSLKNLLWLNLEQNNLGTGTATDLDFVTFLTNCSSLKALSLADNQF 186 (833)
Q Consensus 107 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l 186 (833)
.|+.+.-..|..-.++++|+|++|+|+.+..+.|.++.+|..|.|++|+|++++. ..|.+|++|+.|+|..|+|
T Consensus 160 ~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~------r~Fk~L~~L~~LdLnrN~i 233 (873)
T KOG4194|consen 160 LISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQ------RSFKRLPKLESLDLNRNRI 233 (873)
T ss_pred hhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCH------HHhhhcchhhhhhccccce
Confidence 5554433444444455555555555555555555555555555555555555443 2244455555555555555
Q ss_pred cccCChhHhhhcccccEEEccCccccccCChhhhcCCCCCeEeccCCcccccCCccccCCCCCCEEEcccccCcccCCcc
Q 040925 187 GGELPHSIANLSSTVINFGIGRNQISGTIPPGIRNLVNLIGFGAEENQLHGTIPDAIGELKNLQKLCLFRNFLQGRIPSG 266 (833)
Q Consensus 187 ~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 266 (833)
.-.---.|..+ ..+++|.|.+|.|.....+.|..+.++++|+|+.|++...-.+++.+|+.|+.|+||+|.|..+.+++
T Consensus 234 rive~ltFqgL-~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~ 312 (873)
T KOG4194|consen 234 RIVEGLTFQGL-PSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDS 312 (873)
T ss_pred eeehhhhhcCc-hhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecch
Confidence 41112222222 22455555555555556666666666666666666666666666666666666666666666666666
Q ss_pred ccCCCCCCeEEeecccccCCCCCCCCCCCccceeecCCceecccCCc-ccccccccceeeecCCCccCCCC---Cccccc
Q 040925 267 LGNLTKLANLELSSNSLQGNIPSSLGNCQNLMSFTASQNKLTGALPH-QLLSITTLSLYLDLSNNLLNGSL---PLQVGH 342 (833)
Q Consensus 267 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~~ll~~L~ls~N~l~~~~---~~~~~~ 342 (833)
....++|++|+|++|+|+...+.+|..+..|++|+|++|+++ .+-+ .+..+.++ +.|||++|.|+..+ ...|.+
T Consensus 313 WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~-~l~e~af~~lssL-~~LdLr~N~ls~~IEDaa~~f~g 390 (873)
T KOG4194|consen 313 WSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSID-HLAEGAFVGLSSL-HKLDLRSNELSWCIEDAAVAFNG 390 (873)
T ss_pred hhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchH-HHHhhHHHHhhhh-hhhcCcCCeEEEEEecchhhhcc
Confidence 666666666666666666666666666666666666666666 3333 33333333 56677777666443 346888
Q ss_pred CCCcCEEeccCCcCCCCCCccccCCCCCcEEeecCCccccccCccccCCCCCCeEEccCccc
Q 040925 343 LKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNVSSNNL 404 (833)
Q Consensus 343 l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l 404 (833)
|++|+.|+|.+|+|..+...+|.+++.|++|||.+|.|.++.|.+|..+ .|++|-+..-.+
T Consensus 391 l~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSssf 451 (873)
T KOG4194|consen 391 LPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSSSF 451 (873)
T ss_pred chhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcccce
Confidence 9999999999999998888999999999999999999999999999999 999998765443
No 7
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-43 Score=375.90 Aligned_cols=269 Identities=38% Similarity=0.618 Sum_probs=218.9
Q ss_pred CCCccchHHHHHHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeE
Q 040925 517 QFPMVSYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITI 596 (833)
Q Consensus 517 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 596 (833)
....|++.++..+|++|.....||+|+||.||+|... +++.||||++........++|.+|++++.+++|||+|+++||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEE
Confidence 4667999999999999999999999999999999997 458999998865433214569999999999999999999999
Q ss_pred eecCCCCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeec
Q 040925 597 CSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLD 676 (833)
Q Consensus 597 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~ 676 (833)
|.+.+ ...++|+|||++|+|.+++...... .++|.++++|+.++|+||+|||+.+.|+||||||||+|||+|
T Consensus 140 C~e~~----~~~~LVYEym~nGsL~d~L~~~~~~----~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD 211 (361)
T KOG1187|consen 140 CLEGG----EHRLLVYEYMPNGSLEDHLHGKKGE----PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLD 211 (361)
T ss_pred EecCC----ceEEEEEEccCCCCHHHHhCCCCCC----CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeEC
Confidence 97665 1589999999999999999986542 689999999999999999999999888999999999999999
Q ss_pred CCCcEEEcccccccccCc-ccccccccCCCccccc-cccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHH
Q 040925 677 HDMVAHVCDFGLAKFLSD-HQLDTAVKTPSSSIGL-KGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFA 754 (833)
Q Consensus 677 ~~~~~kL~DfG~a~~~~~-~~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~ 754 (833)
+++++||+|||+|+.... ... . ... .||.+|+|||+...+..+.|+|||| +|+++.|++
T Consensus 212 ~~~~aKlsDFGLa~~~~~~~~~---~------~~~~~gt~gY~~PEy~~~g~lt~KsDVyS----------FGVvllEli 272 (361)
T KOG1187|consen 212 EDFNAKLSDFGLAKLGPEGDTS---V------STTVMGTFGYLAPEYASTGKLTEKSDVYS----------FGVVLLELI 272 (361)
T ss_pred CCCCEEccCccCcccCCccccc---e------eeecCCCCccCChhhhccCCcCccccccc----------chHHHHHHH
Confidence 999999999999975543 111 0 011 5999999999999999999999999 444555555
Q ss_pred HHhCCCc----------------------ccccccccchhhhccccchhhhhhhhch-HHHHHHHHHHhhccCCCCCCCC
Q 040925 755 KTALPEK----------------------VMEIVDPSLLMEVMTNNSMIQEDKRVKT-EECLNAIIRTGVLCSMESPFER 811 (833)
Q Consensus 755 ~~~~p~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~R 811 (833)
++..+.. ..+++|+.+.. .... .+....+..++.+|++.+|.+|
T Consensus 273 tgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~-------------~~~~~~~~~~~~~~~a~~C~~~~~~~R 339 (361)
T KOG1187|consen 273 TGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKE-------------GEYPDEKEVKKLAELALRCLRPDPKER 339 (361)
T ss_pred hCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccC-------------CCCChHHHHHHHHHHHHHHcCcCCCcC
Confidence 5443222 33344443321 1111 1467779999999999999999
Q ss_pred CCHHHHHHHHHHhhh
Q 040925 812 MDMRDVVAKLCHTRE 826 (833)
Q Consensus 812 Pt~~eil~~L~~i~~ 826 (833)
|+|.||+++|+.+..
T Consensus 340 P~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 340 PTMSQVVKELEGILS 354 (361)
T ss_pred cCHHHHHHHHHhhcc
Confidence 999999999976653
No 8
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-44 Score=358.64 Aligned_cols=254 Identities=26% Similarity=0.349 Sum_probs=202.1
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC-------cchhHHHHHHHHHhhcCCCccceEeeEeecCCC
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-------GASRSFVAECEALRNIRHRNLIKIITICSSTDF 602 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 602 (833)
.+.|.+.+.||+|+||.|-+|..+.+|+.||||++..... .......+|+++|++++|||||++++++..++
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d- 249 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD- 249 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC-
Confidence 4568889999999999999999999999999999964311 12234679999999999999999999976655
Q ss_pred CCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCC---C
Q 040925 603 KGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHD---M 679 (833)
Q Consensus 603 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~---~ 679 (833)
..||||||++||+|.+.+-.++ .+.+...+.+++|++.|+.|||+. ||+||||||+|||+..+ .
T Consensus 250 ----s~YmVlE~v~GGeLfd~vv~nk------~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~ 316 (475)
T KOG0615|consen 250 ----SSYMVLEYVEGGELFDKVVANK------YLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDC 316 (475)
T ss_pred ----ceEEEEEEecCccHHHHHHhcc------ccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcce
Confidence 8899999999999999998876 577788899999999999999999 99999999999999766 6
Q ss_pred cEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCC---CcccccccCCcCCCccccCCccHHHHHHH
Q 040925 680 VAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEA---SMTGDIFTGRRPIDAVFNEGHSLHEFAKT 756 (833)
Q Consensus 680 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~Di~s~~~~~~~~~~~g~~l~~~~~~ 756 (833)
.+||+|||+|+..+.. ......+|||.|.|||++.+..+ ..++|||| .|+++|-+++|
T Consensus 317 llKItDFGlAK~~g~~---------sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWS----------lGcvLfvcLsG 377 (475)
T KOG0615|consen 317 LLKITDFGLAKVSGEG---------SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWS----------LGCVLFVCLSG 377 (475)
T ss_pred EEEecccchhhccccc---------eehhhhcCCccccChhheecCCeecccchheeee----------ccceEEEEecc
Confidence 8999999999976543 33445799999999999887653 34779999 55555555666
Q ss_pred hCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 757 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
..|+.. +.-++.+..+..+..+... .....++.++..++|.+||..||++|||++|+++.
T Consensus 378 ~pPFS~-~~~~~sl~eQI~~G~y~f~---p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 378 YPPFSE-EYTDPSLKEQILKGRYAFG---PLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred CCCccc-ccCCccHHHHHhcCccccc---ChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 666642 2223334333333333222 22334567788999999999999999999999875
No 9
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.5e-44 Score=374.42 Aligned_cols=249 Identities=22% Similarity=0.302 Sum_probs=211.5
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeecc---CCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK---YKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
.+|...+.||+|+|+.||++++.++|+.||+|++... .....+++.+|+++.++|+|||||+++++|.+ ..+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FED-----s~n 92 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFED-----SNN 92 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeec-----CCc
Confidence 4699999999999999999999889999999999753 34456789999999999999999999999554 459
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
+|+|.|+|+.|+|.++++.++ ++++.+++.+++||+.||.|||+. +|+|||||..|++++++.+|||+|||
T Consensus 93 VYivLELC~~~sL~el~Krrk------~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFG 163 (592)
T KOG0575|consen 93 VYIVLELCHRGSLMELLKRRK------PLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFG 163 (592)
T ss_pred eEEEEEecCCccHHHHHHhcC------CCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccc
Confidence 999999999999999999654 799999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD 767 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~ 767 (833)
+|..+..+. .+....+|||.|.|||++.....+..+|||| .|+++|-++.|..|++....-+
T Consensus 164 LAt~le~~~--------Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWS----------lGcvmYtLL~G~PPFetk~vke 225 (592)
T KOG0575|consen 164 LATQLEYDG--------ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWS----------LGCVMYTLLVGRPPFETKTVKE 225 (592)
T ss_pred eeeeecCcc--------cccceecCCCcccChhHhccCCCCCchhhhh----------hhhHHHhhhhCCCCcccchHHH
Confidence 999876432 3445689999999999999999999999999 8888999999999987443222
Q ss_pred ccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 768 PSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.--......+ ..++..+.+..++|..+|.+||.+|||+++|+..
T Consensus 226 ty~~Ik~~~Y---------~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 226 TYNKIKLNEY---------SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred HHHHHHhcCc---------ccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 2111111111 1233456677899999999999999999999875
No 10
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-43 Score=372.83 Aligned_cols=260 Identities=29% Similarity=0.436 Sum_probs=210.4
Q ss_pred CccCceeccCcceEEEEEEECCCceE-EEEEEeeccCCcc--hhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 533 FSSSNMIGQGSFGYVYKGTLGEDEMI-VAVKVINLKYKGA--SRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 533 y~~~~~lg~G~~g~Vy~~~~~~~~~~-vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
..+.+.+|+|+||+||+|.++ |.. ||||++....... .+.|.+|+.+|++++|||||+++|+|.... ...+
T Consensus 43 l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~----~~~~ 116 (362)
T KOG0192|consen 43 LPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPP----GSLC 116 (362)
T ss_pred hhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC----CceE
Confidence 444566999999999999996 444 9999997553322 458999999999999999999999987654 2589
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCC-ceeeCCCCCCeeecCCC-cEEEcccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPP-MVHGDLKPSNVLLDHDM-VAHVCDFG 687 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~-ivH~Dlkp~NIll~~~~-~~kL~DfG 687 (833)
+||||+++|+|.+++..... ..+++..+.+|+.|||+||.|||+. + ||||||||+|||++.++ ++||+|||
T Consensus 117 iVtEy~~~GsL~~~l~~~~~----~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFG 189 (362)
T KOG0192|consen 117 IVTEYMPGGSLSVLLHKKRK----RKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFG 189 (362)
T ss_pred EEEEeCCCCcHHHHHhhccc----CCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCc
Confidence 99999999999999987421 2799999999999999999999999 7 99999999999999998 99999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccC--CCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGM--GSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEI 765 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~ 765 (833)
+++...... .......||+.|||||++. ...|+.|+|||| +|+++||+.++..|+.....
T Consensus 190 lsr~~~~~~--------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvyS----------FgIvlWEl~t~~~Pf~~~~~ 251 (362)
T KOG0192|consen 190 LSREKVISK--------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYS----------FGIVLWELLTGEIPFEDLAP 251 (362)
T ss_pred cceeecccc--------ccccCCCCCccccChhhhcCCCCcCCccchhhh----------HHHHHHHHHHCCCCCCCCCH
Confidence 998655421 1112256999999999999 568999999999 89999999999999874432
Q ss_pred ccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhhhhhc
Q 040925 766 VDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRETFLG 830 (833)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~~~~~ 830 (833)
.. .......... ....+.++++.+..++.+||..||++||++.+|+..|+.+...+..
T Consensus 252 ~~--~~~~v~~~~~-----Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~ 309 (362)
T KOG0192|consen 252 VQ--VASAVVVGGL-----RPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS 309 (362)
T ss_pred HH--HHHHHHhcCC-----CCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence 21 1111111111 1122334788999999999999999999999999999999876553
No 11
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.9e-45 Score=348.33 Aligned_cols=264 Identities=24% Similarity=0.322 Sum_probs=208.8
Q ss_pred HhcCCccCceeccCcceEEEEEEECCCceEEEEEEeecc--CCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCc
Q 040925 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK--YKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTD 606 (833)
Q Consensus 529 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 606 (833)
...+|++.++||+|+||+||+|....+|..||.|.++.. +....+....|+.+|++++|||||+++++.... +..
T Consensus 17 ~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~---~~e 93 (375)
T KOG0591|consen 17 TLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIE---DNE 93 (375)
T ss_pred cHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhc---cch
Confidence 345689999999999999999999999999999999744 234457889999999999999999999853222 223
Q ss_pred eEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCC--ceeeCCCCCCeeecCCCcEEEc
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPP--MVHGDLKPSNVLLDHDMVAHVC 684 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kL~ 684 (833)
-.++|||||++|+|.++|+..+.+ ...+++..+|+++.|++.||.++|+.. +. |+||||||.||+++.+|.|||+
T Consensus 94 vlnivmE~c~~GDLsqmIk~~K~q--kr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvvKLG 170 (375)
T KOG0591|consen 94 VLNIVMELCDAGDLSQMIKHFKKQ--KRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVVKLG 170 (375)
T ss_pred hhHHHHHhhcccCHHHHHHHHHhc--cccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEcCCCceeec
Confidence 489999999999999999865543 237999999999999999999999942 24 8999999999999999999999
Q ss_pred ccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccc
Q 040925 685 DFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVME 764 (833)
Q Consensus 685 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~ 764 (833)
|||+++.+.... ....+.+|||.||+||.+.+.+|+.+||||| .|+.+|||..-..|+.-..
T Consensus 171 DfGL~r~l~s~~--------tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWs----------lGCllyEMcaL~~PF~g~n 232 (375)
T KOG0591|consen 171 DFGLGRFLSSKT--------TFAHSLVGTPYYMSPERIHESGYNFKSDIWS----------LGCLLYEMCALQSPFYGDN 232 (375)
T ss_pred cchhHhHhcchh--------HHHHhhcCCCcccCHHHHhcCCCCcchhHHH----------HHHHHHHHHhcCCCccccc
Confidence 999999876543 2344578999999999999999999999999 7777888888877765332
Q ss_pred cccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 040925 765 IVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCH 823 (833)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 823 (833)
.. .+......... .+...+.++..+.+++..|+..||+.||+.-.++..+..
T Consensus 233 ~~--~L~~KI~qgd~-----~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 233 LL--SLCKKIEQGDY-----PPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred HH--HHHHHHHcCCC-----CCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 11 11111111111 112235678889999999999999999986666555544
No 12
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=1.2e-46 Score=372.90 Aligned_cols=427 Identities=32% Similarity=0.447 Sum_probs=333.1
Q ss_pred CcEEEcCCCcCcccCCccccCCCCCCEEEccCCcccccCCccCCCCCCCCEEEcCCCcccccCCccccCCCCCcEEECCC
Q 040925 1 LQTLAVNDNYLTGQLPDFVGNLSDLEVIRIMGNSLGGKIPTTLGLLRNLVSLNVAENKFSGMFPRSICNISSLELIQLAL 80 (833)
Q Consensus 1 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 80 (833)
|+.|++++|.++ .+.+.+.++..|++|++++|++ ...|++++.+..++.|+.++|+++ .+|+++..+.+|..|++++
T Consensus 47 l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l-~~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~ 123 (565)
T KOG0472|consen 47 LQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKL-SQLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSS 123 (565)
T ss_pred hhhhhhccCchh-hccHhhhcccceeEEEeccchh-hhCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhccc
Confidence 467888999998 5667788899999999999999 567888888999999999999998 7888889999999999999
Q ss_pred cccccccCchhhcCCCCccEEEccCCcceeeCCccccCCCCCcEEEcccCccccccCcCccCCCcCceEecccccCCCCC
Q 040925 81 NRFSGNLPFDIVVNLPNLKALAIGGNNFFGSIPYSLSNASNLELLDLSVNQFKGNVSIDFSSLKNLLWLNLEQNNLGTGT 160 (833)
Q Consensus 81 N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 160 (833)
|++. .+|++++ .+..|..|+..+|+++ ..|..+..+.+|..|++.+|+++..+++.+. |+.|++|++..|.++++|
T Consensus 124 n~~~-el~~~i~-~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~tlP 199 (565)
T KOG0472|consen 124 NELK-ELPDSIG-RLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLETLP 199 (565)
T ss_pred ccee-ecCchHH-HHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhhcCC
Confidence 9988 7887774 6778888888888887 6777788888888888888888877776666 888888888888888776
Q ss_pred CCCcccccccCCCCCCCEEEccCCcCcccCChhHhhhcccccEEEccCccccccCChh-hhcCCCCCeEeccCCcccccC
Q 040925 161 ATDLDFVTFLTNCSSLKALSLADNQFGGELPHSIANLSSTVINFGIGRNQISGTIPPG-IRNLVNLIGFGAEENQLHGTI 239 (833)
Q Consensus 161 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~-~~~l~~L~~L~L~~N~l~~~~ 239 (833)
++ ++.+.+|+-|||..|+|. .+| +|.... .+.+|+++.|+|+ .+|.+ ..+++++..|||.+|+++ ..
T Consensus 200 ~~-------lg~l~~L~~LyL~~Nki~-~lP-ef~gcs-~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~ 267 (565)
T KOG0472|consen 200 PE-------LGGLESLELLYLRRNKIR-FLP-EFPGCS-LLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EV 267 (565)
T ss_pred hh-------hcchhhhHHHHhhhcccc-cCC-CCCccH-HHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cC
Confidence 54 667777777777777776 566 454443 3666777777777 34433 347777777777777777 56
Q ss_pred CccccCCCCCCEEEcccccCcccCCccccCCCCCCeEEeecccccC----------------------------------
Q 040925 240 PDAIGELKNLQKLCLFRNFLQGRIPSGLGNLTKLANLELSSNSLQG---------------------------------- 285 (833)
Q Consensus 240 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~---------------------------------- 285 (833)
|+.+.-+.+|..||+|+|.|+ ..|..++++ .|+.|-+.+|.+..
T Consensus 268 Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e 345 (565)
T KOG0472|consen 268 PDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTE 345 (565)
T ss_pred chHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCccccc
Confidence 677777777777777777777 456667776 67777777766531
Q ss_pred ------------------------------CCCCCCCCCC---ccceeecCCceecccCCcccccccccceeeecCCCcc
Q 040925 286 ------------------------------NIPSSLGNCQ---NLMSFTASQNKLTGALPHQLLSITTLSLYLDLSNNLL 332 (833)
Q Consensus 286 ------------------------------~~~~~~~~l~---~L~~L~l~~N~l~~~~p~~~~~~~~ll~~L~ls~N~l 332 (833)
.+|+...... -....++++|++. .+|..+..+..+...+.+++|.+
T Consensus 346 ~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~i 424 (565)
T KOG0472|consen 346 TAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKI 424 (565)
T ss_pred ccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCcc
Confidence 1111111111 1345566667766 67776666666666677777777
Q ss_pred CCCCCcccccCCCcCEEeccCCcCCCCCCccccCCCCCcEEeecCCccccccCccccCCCCCCeEEccCcccCCCchhhh
Q 040925 333 NGSLPLQVGHLKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNVSSNNLSGQIPEFL 412 (833)
Q Consensus 333 ~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l 412 (833)
. .+|..++.+++|+.|+|++|.+. .+|..+..+..|+.|++|+|++. ..|.....+..|+.+-.++|++....|..+
T Consensus 425 s-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l 501 (565)
T KOG0472|consen 425 S-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGL 501 (565)
T ss_pred c-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHh
Confidence 6 77888889999999999999997 67888899999999999999998 678888888888888888899998888889
Q ss_pred cCCCCCceEECccCcCccccCCCCccCCCccccccCCcCC
Q 040925 413 KNLSVLEFLSLSYNHFEGEVPTKGVFSNKTKISLQGNMKL 452 (833)
Q Consensus 413 ~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~l~~N~~~ 452 (833)
.++.+|.+|||.+|.+...||..|...+++.+.+.|||+-
T Consensus 502 ~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 502 KNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred hhhhhcceeccCCCchhhCChhhccccceeEEEecCCccC
Confidence 9999999999999999999999999999999999999874
No 13
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-42 Score=362.06 Aligned_cols=259 Identities=27% Similarity=0.424 Sum_probs=206.2
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEE
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFV 611 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 611 (833)
.+...+.||+|.||+||.|.+. ....||+|.++.. ....+.|.+|+.+|++++|++||+++|+|...+ .+|||
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~-----piyIV 279 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWN-GSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQE-----PIYIV 279 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEc-CCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCC-----ceEEE
Confidence 3556689999999999999997 4557999999855 334578899999999999999999999997654 68999
Q ss_pred EEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccc
Q 040925 612 FEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKF 691 (833)
Q Consensus 612 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 691 (833)
||||+.|+|.+++....+. .+...+.+.++.|||+|++||+++ ++|||||..+|||++++..+||+|||+|+.
T Consensus 280 tE~m~~GsLl~yLr~~~~~----~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~ 352 (468)
T KOG0197|consen 280 TEYMPKGSLLDYLRTREGG----LLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARL 352 (468)
T ss_pred EEecccCcHHHHhhhcCCC----ccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccc
Confidence 9999999999999974332 789999999999999999999999 999999999999999999999999999996
Q ss_pred cCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccch
Q 040925 692 LSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLL 771 (833)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~ 771 (833)
+.++...... +-.-...|.|||.+....++.||||||+|+.++++++.|...|.-++. .++.+.++...
T Consensus 353 ~~d~~Y~~~~-------~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn---~ev~~~le~Gy- 421 (468)
T KOG0197|consen 353 IGDDEYTASE-------GGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN---EEVLELLERGY- 421 (468)
T ss_pred cCCCceeecC-------CCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH---HHHHHHHhccC-
Confidence 6654432211 112456899999999999999999999777777666664432210000 00111111111
Q ss_pred hhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhhhh
Q 040925 772 MEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRETF 828 (833)
Q Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~~~ 828 (833)
.-+.++.|++.+.++|..||+.+|++|||++.+...++.+....
T Consensus 422 -------------Rlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~ 465 (468)
T KOG0197|consen 422 -------------RLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTST 465 (468)
T ss_pred -------------cCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhcc
Confidence 12345668999999999999999999999999999999887643
No 14
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=3.9e-42 Score=329.27 Aligned_cols=268 Identities=21% Similarity=0.295 Sum_probs=195.9
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC--cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceE
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
+.|+...++|+|+||+||+++++++|+.||||++....+ ...+...+|+++|++++|||+|.++.+|. .....
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFr-----rkrkl 76 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFR-----RKRKL 76 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHH-----hccee
Confidence 468888999999999999999999999999999964322 23466899999999999999999999954 44589
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
++|+|||+. ++.+-+..... .++...+.++++|+++|+.|+|++ ++|||||||+|||++.+|.+||||||+
T Consensus 77 hLVFE~~dh-TvL~eLe~~p~-----G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGF 147 (396)
T KOG0593|consen 77 HLVFEYCDH-TVLHELERYPN-----GVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGF 147 (396)
T ss_pred EEEeeecch-HHHHHHHhccC-----CCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchh
Confidence 999999986 77666766553 689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCccccCCc---------cHHHHHH--H
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFNEGH---------SLHEFAK--T 756 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~~g~---------~l~~~~~--~ 756 (833)
|+.+..+. ...+.++.|.+|+|||.+.| ..|...+|||+-||.|.++..+.. .+|.+.. |
T Consensus 148 AR~L~~pg--------d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG 219 (396)
T KOG0593|consen 148 ARTLSAPG--------DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLG 219 (396)
T ss_pred hHhhcCCc--------chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHc
Confidence 99876422 12234678999999999887 679999999996666655443210 1111111 1
Q ss_pred hCCCcccccccccchhhhccccc-hhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 757 ALPEKVMEIVDPSLLMEVMTNNS-MIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 757 ~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.+......++...-....+.-.. .-...-+...+....-+.+++..|++.||++|++.+|++..
T Consensus 220 ~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 220 NLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred ccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 11111111111000000000000 00001112233455678999999999999999999999754
No 15
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-42 Score=353.71 Aligned_cols=261 Identities=25% Similarity=0.338 Sum_probs=215.5
Q ss_pred HHHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeecc---CCcchhHHHHHHHHHhhc-CCCccceEeeEeecCCC
Q 040925 527 SKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK---YKGASRSFVAECEALRNI-RHRNLIKIITICSSTDF 602 (833)
Q Consensus 527 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 602 (833)
.+...+|...+.||+|+|++||+|+.+.+++.||||++.+. .+...+.+..|-.+|.+| .||.|+++|..|.+..
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~- 147 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEE- 147 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeeccc-
Confidence 34456899999999999999999999999999999999644 233456788999999999 7999999998865544
Q ss_pred CCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEE
Q 040925 603 KGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH 682 (833)
Q Consensus 603 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 682 (833)
..|+|+||+++|+|.++|++.+ .+++..++.++.+|+.||+|||+. |||||||||+|||+|+||.+|
T Consensus 148 ----sLYFvLe~A~nGdll~~i~K~G------sfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhik 214 (604)
T KOG0592|consen 148 ----SLYFVLEYAPNGDLLDLIKKYG------SFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIK 214 (604)
T ss_pred ----ceEEEEEecCCCcHHHHHHHhC------cchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEE
Confidence 8999999999999999999876 799999999999999999999999 999999999999999999999
Q ss_pred EcccccccccCcccccc-----cccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHh
Q 040925 683 VCDFGLAKFLSDHQLDT-----AVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTA 757 (833)
Q Consensus 683 L~DfG~a~~~~~~~~~~-----~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~ 757 (833)
|+|||.|+.+.+..... .........+++||..|.+||++.+...++.+|||+ +|+++|.|+.|.
T Consensus 215 ITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWA----------lGCilyQmlaG~ 284 (604)
T KOG0592|consen 215 ITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWA----------LGCILYQMLAGQ 284 (604)
T ss_pred EeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHH----------HHHHHHHHhcCC
Confidence 99999999887654431 111122235689999999999999999999999999 888999999999
Q ss_pred CCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 758 LPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 758 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.|+...... -....++.-.. ..++.+++.+.+|+.+.|..||.+|+|++||.++
T Consensus 285 PPFra~Ney--liFqkI~~l~y-------~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 285 PPFRAANEY--LIFQKIQALDY-------EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred CCCccccHH--HHHHHHHHhcc-------cCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 998732211 11111111111 2244556788899999999999999999888765
No 16
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-42 Score=339.99 Aligned_cols=244 Identities=24% Similarity=0.307 Sum_probs=200.5
Q ss_pred HhcCCccCceeccCcceEEEEEEECCCceEEEEEEeecc---CCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCC
Q 040925 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK---YKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGT 605 (833)
Q Consensus 529 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 605 (833)
..++|++.+.||+|+||+||.++.+++++.||+|++++. .....+...+|..+|.+++||.||+++..+ ++.
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysF-----Qt~ 97 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSF-----QTE 97 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEec-----ccC
Confidence 356899999999999999999999999999999999754 233457789999999999999999999874 455
Q ss_pred ceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcc
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 685 (833)
...|+|+||+.||.|..++.+.+ .+++..++-++..|+.||.|||++ |||||||||+|||+|.+|.++|+|
T Consensus 98 ~kLylVld~~~GGeLf~hL~~eg------~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtD 168 (357)
T KOG0598|consen 98 EKLYLVLDYLNGGELFYHLQREG------RFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTD 168 (357)
T ss_pred CeEEEEEeccCCccHHHHHHhcC------CcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEec
Confidence 59999999999999999999776 799999999999999999999999 999999999999999999999999
Q ss_pred cccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccc
Q 040925 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEI 765 (833)
Q Consensus 686 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~ 765 (833)
||+|+..-.. ...+.+++||+.|||||++.+..|+.++|+|| .|+.+|+|.+|..|+...+.
T Consensus 169 FgL~k~~~~~--------~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWs----------LGillYeML~G~pPF~~~~~ 230 (357)
T KOG0598|consen 169 FGLCKEDLKD--------GDATRTFCGTPEYMAPEILLGKGYDKAVDWWS----------LGILLYEMLTGKPPFYAEDV 230 (357)
T ss_pred cccchhcccC--------CCccccccCCccccChHHHhcCCCCcccchHh----------HHHHHHHHhhCCCCCcCccH
Confidence 9999854332 12233478999999999999999999999999 89999999999999763321
Q ss_pred ccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCC
Q 040925 766 VDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERM 812 (833)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 812 (833)
. ...+.+.... ....+.-......+++.+.+.+||++|.
T Consensus 231 ~---~~~~~I~~~k-----~~~~p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 231 K---KMYDKILKGK-----LPLPPGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred H---HHHHHHhcCc-----CCCCCccCCHHHHHHHHHHhccCHHHhc
Confidence 1 1111111110 0111112345677899999999999995
No 17
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-41 Score=342.59 Aligned_cols=263 Identities=25% Similarity=0.343 Sum_probs=200.0
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
..+|...+.||+|+||.||++.+..+|+.+|||.+........+.+.+|+++|++++|||||+++|...... + ..++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~--~-~~~~ 92 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRE--N-DEYN 92 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCcccccc--C-eeeE
Confidence 345788899999999999999999889999999997553333667899999999999999999999743332 1 3689
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecC-CCcEEEccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDH-DMVAHVCDFGL 688 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kL~DfG~ 688 (833)
+.|||+++|+|.+++...+. ++++..++.+.+||++||+|||++ |||||||||+|||++. ++.+||+|||+
T Consensus 93 i~mEy~~~GsL~~~~~~~g~-----~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~ 164 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRYGG-----KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGL 164 (313)
T ss_pred eeeeccCCCcHHHHHHHcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcc
Confidence 99999999999999998753 489999999999999999999999 9999999999999999 69999999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccCCC-CCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS-EASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD 767 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~ 767 (833)
++...... ..........||+.|||||++.++ ....++||||.| +++.||+++..||.......
T Consensus 165 a~~~~~~~-----~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlG----------CtVvEM~Tg~~PW~~~~~~~ 229 (313)
T KOG0198|consen 165 AKKLESKG-----TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLG----------CTVVEMLTGKPPWSEFFEEA 229 (313)
T ss_pred cccccccc-----ccccccccccCCccccCchhhcCCCcCCccchhhhcC----------CEEEeccCCCCcchhhcchH
Confidence 98765311 111223346799999999999853 344599999954 45555555555544310001
Q ss_pred ccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 040925 768 PSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHT 824 (833)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i 824 (833)
........... . ...+...+....+++.+|+.+||++||||+++++.-.-.
T Consensus 230 ~~~~~ig~~~~--~----P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~ 280 (313)
T KOG0198|consen 230 EALLLIGREDS--L----PEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLK 280 (313)
T ss_pred HHHHHHhccCC--C----CCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhh
Confidence 11111111110 0 022334566788999999999999999999999875443
No 18
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.6e-41 Score=318.52 Aligned_cols=268 Identities=22% Similarity=0.303 Sum_probs=202.2
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC--cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceE
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
.+|...+++|+|.||.||+|++..+|+.||||+++.... +......+|+..|+.++||||+.+++++.+. ...
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~-----~~l 76 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHK-----SNL 76 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCC-----Cce
Confidence 468889999999999999999999999999999986532 2346789999999999999999999996544 489
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
.+|+||++. +|+..|+.... .++..++..|+.++++|++|||++ .|+||||||.|+|++.+|.+||+|||+
T Consensus 77 ~lVfEfm~t-dLe~vIkd~~i-----~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGL 147 (318)
T KOG0659|consen 77 SLVFEFMPT-DLEVVIKDKNI-----ILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGL 147 (318)
T ss_pred EEEEEeccc-cHHHHhccccc-----ccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccc
Confidence 999999986 99999998653 689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccCCC-CCCcccccccCCcCCCcccc-----CCc-cHHHHHH--HhC-
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS-EASMTGDIFTGRRPIDAVFN-----EGH-SLHEFAK--TAL- 758 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Di~s~~~~~~~~~~-----~g~-~l~~~~~--~~~- 758 (833)
|+.+..+.... ...+-|.+|+|||.+.|. .|+...|+||.||.+.|+.- .|. .+-++.. +.+
T Consensus 148 Ar~f~~p~~~~--------~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LG 219 (318)
T KOG0659|consen 148 ARFFGSPNRIQ--------THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALG 219 (318)
T ss_pred hhccCCCCccc--------ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcC
Confidence 99887654322 123689999999998875 59999999998888776532 122 1222111 111
Q ss_pred CCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 759 PEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 759 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.....+..+-....++..-.....+........+.....+++..++..||.+|+|+.|++++
T Consensus 220 TP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 220 TPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred CCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 00000111111111222211111222222334456677999999999999999999999875
No 19
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-42 Score=350.51 Aligned_cols=269 Identities=20% Similarity=0.252 Sum_probs=200.6
Q ss_pred HhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcch-hHHHHHHHHHhhcC-CCccceEeeEeecCCCCCCc
Q 040925 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGAS-RSFVAECEALRNIR-HRNLIKIITICSSTDFKGTD 606 (833)
Q Consensus 529 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~-~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 606 (833)
..++|.+.++||.|.||.||+|+...++..||||+++....... -.-.+|+..|++++ |||||++.+++.+.+ .
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~----~ 83 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDND----R 83 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccC----c
Confidence 45689999999999999999999999999999999986544322 23468999999998 999999999975543 3
Q ss_pred eEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccc
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDF 686 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 686 (833)
..++|||||+. +|+++++.+++ .+++.+++.|++||++||+|+|.+ |+.|||+||+|||+.....+||+||
T Consensus 84 ~L~fVfE~Md~-NLYqLmK~R~r-----~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDF 154 (538)
T KOG0661|consen 84 ILYFVFEFMDC-NLYQLMKDRNR-----LFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADF 154 (538)
T ss_pred eEeeeHHhhhh-hHHHHHhhcCC-----cCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccc
Confidence 89999999974 99999998743 799999999999999999999999 9999999999999998999999999
Q ss_pred ccccccCcccccccccCCCccccccccccccCccccC-CCCCCcccccccCCcCCCccccCC-----c----cHHHHHHH
Q 040925 687 GLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGM-GSEASMTGDIFTGRRPIDAVFNEG-----H----SLHEFAKT 756 (833)
Q Consensus 687 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~s~~~~~~~~~~~g-----~----~l~~~~~~ 756 (833)
|+|+.+..... .+.++.|.+|+|||++. ..-|+.+.|+|+.||.+.+++++- . .+|.+..-
T Consensus 155 GLARev~SkpP---------YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~V 225 (538)
T KOG0661|consen 155 GLAREVRSKPP---------YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEV 225 (538)
T ss_pred ccccccccCCC---------cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHH
Confidence 99997755332 23467899999999865 566999999999777777665431 1 11221111
Q ss_pred hCCCcccccccccchhhhccccch---hhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 757 ALPEKVMEIVDPSLLMEVMTNNSM---IQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 757 ~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.-.....+..........+..... ..+.....+ .++.+..+++.+|+.+||++||||.|.+++
T Consensus 226 LGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p-~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 226 LGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLP-NASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred hCCCccccchhHHHHHHHhccCCCcCCCCChHHhCc-ccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 100000000000001111111111 111111222 267788999999999999999999999876
No 20
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-41 Score=337.02 Aligned_cols=264 Identities=22% Similarity=0.301 Sum_probs=212.1
Q ss_pred HhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCc-chhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG-ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 529 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
..++|++.+.||.|..++||+|+...+++.||||++..+.-. ..+.+.+|+..|+.++||||++++..|.... .
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~-----~ 98 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDS-----E 98 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecc-----e
Confidence 456899999999999999999999999999999999755333 3588999999999999999999999876665 8
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.|+||.||.+||+.++++..-.. .+++..+..|.+++++||.|||.+ |.||||||+.||||+.+|.|||+|||
T Consensus 99 LWvVmpfMa~GS~ldIik~~~~~----Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFg 171 (516)
T KOG0582|consen 99 LWVVMPFMAGGSLLDIIKTYYPD----GLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFG 171 (516)
T ss_pred eEEeehhhcCCcHHHHHHHHccc----cccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCce
Confidence 99999999999999999876543 699999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCC--CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG--SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEI 765 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~ 765 (833)
.+..+.+.... ...+...++||+.|||||++.. ..|+.|+|||| +|++..|++.|..|+.....
T Consensus 172 vsa~l~~~G~R----~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwS----------fGITA~ELA~G~aPf~k~pP 237 (516)
T KOG0582|consen 172 VSASLFDSGDR----QVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWS----------FGITACELAHGHAPFSKYPP 237 (516)
T ss_pred eeeeecccCce----eeEeeccccCcccccChHHhhhcccCccchhhhhh----------hhHHHHHHhcCCCCcccCCh
Confidence 88766554311 1112256789999999999543 45999999999 88999999999999874332
Q ss_pred ccccchhhhccccch---hhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 766 VDPSLLMEVMTNNSM---IQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 766 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.. +.....++... ....+......+...+.+++..|+.+||++|||++++++.
T Consensus 238 mk--vLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 238 MK--VLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred HH--HHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 11 11111111111 0011112233456689999999999999999999999875
No 21
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-41 Score=351.99 Aligned_cols=251 Identities=22% Similarity=0.308 Sum_probs=212.7
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeE
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAF 610 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 610 (833)
..|...++||+|+.|.||.|+...+++.||||++........+-+.+|+.+|+..+|+|||.+++.|... +..|+
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~-----deLWV 347 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVG-----DELWV 347 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhccc-----ceeEE
Confidence 4678889999999999999999999999999999877776777899999999999999999999876444 48999
Q ss_pred EEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccc
Q 040925 611 VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690 (833)
Q Consensus 611 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 690 (833)
||||++||+|.|++... .+++.++..|++++++||+|||.+ ||+|||||.+|||++.+|.+||+|||+|.
T Consensus 348 VMEym~ggsLTDvVt~~-------~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFca 417 (550)
T KOG0578|consen 348 VMEYMEGGSLTDVVTKT-------RMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCA 417 (550)
T ss_pred EEeecCCCchhhhhhcc-------cccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeee
Confidence 99999999999999865 589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccc
Q 040925 691 FLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSL 770 (833)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~ 770 (833)
.+..... +....+|||+|||||+.....|++|+|||| +|.+..||+.|+.|+-....+..-+
T Consensus 418 qi~~~~~--------KR~TmVGTPYWMAPEVvtrk~YG~KVDIWS----------LGIMaIEMveGEPPYlnE~PlrAly 479 (550)
T KOG0578|consen 418 QISEEQS--------KRSTMVGTPYWMAPEVVTRKPYGPKVDIWS----------LGIMAIEMVEGEPPYLNENPLRALY 479 (550)
T ss_pred ccccccC--------ccccccCCCCccchhhhhhcccCccccchh----------hhhHHHHHhcCCCCccCCChHHHHH
Confidence 7765432 334568999999999999999999999999 8999999999999876433222222
Q ss_pred hhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 771 LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
..... ....-..++..+..+.+++.+||+.||++||++.|+++.
T Consensus 480 LIa~n------g~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 480 LIATN------GTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred HHhhc------CCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 11110 011112344567789999999999999999999999876
No 22
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.8e-41 Score=343.91 Aligned_cols=269 Identities=23% Similarity=0.311 Sum_probs=205.6
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC--CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceE
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
+.|+.+++||+|.||.||+|++..+|+.||+|+++... .+...-+.+|+.||++++||||+++.+...+.. ...+
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~---~~si 193 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKL---SGSI 193 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecC---CceE
Confidence 35778899999999999999999999999999998664 445677899999999999999999999987652 4589
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
|+|+|||+. ||..++....- .+++.++..++.|++.||+|+|++ ||+|||||.+|||||.+|.+||+|||+
T Consensus 194 YlVFeYMdh-DL~GLl~~p~v-----kft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGL 264 (560)
T KOG0600|consen 194 YLVFEYMDH-DLSGLLSSPGV-----KFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGL 264 (560)
T ss_pred EEEEecccc-hhhhhhcCCCc-----ccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccc
Confidence 999999987 99999887542 799999999999999999999999 999999999999999999999999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccCCC-CCCcccccccCCcCCCccccCCccH---------HHHHH--H
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS-EASMTGDIFTGRRPIDAVFNEGHSL---------HEFAK--T 756 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Di~s~~~~~~~~~~~g~~l---------~~~~~--~ 756 (833)
|+++..... ...+..+-|.+|+|||.+.|. .|+++.|+||.||++.++|.+..++ ..+.. |
T Consensus 265 Ar~y~~~~~-------~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcG 337 (560)
T KOG0600|consen 265 ARFYTPSGS-------APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCG 337 (560)
T ss_pred eeeccCCCC-------cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhC
Confidence 998765432 123446789999999998875 5999999999888888877543221 11111 1
Q ss_pred hCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 757 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
...+..+...+-.. ....+.........+......+....+++..+|..||++|.||.++++
T Consensus 338 SP~e~~W~~~kLP~-~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 338 SPTEDYWPVSKLPH-ATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred CCChhccccccCCc-ccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 11111111111000 000111111111222334556778889999999999999999999875
No 23
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=1.5e-44 Score=358.02 Aligned_cols=409 Identities=30% Similarity=0.468 Sum_probs=343.5
Q ss_pred CcEEEcCCCcCcccCCccccCCCCCCEEEccCCcccccCCccCCCCCCCCEEEcCCCcccccCCccccCCCCCcEEECCC
Q 040925 1 LQTLAVNDNYLTGQLPDFVGNLSDLEVIRIMGNSLGGKIPTTLGLLRNLVSLNVAENKFSGMFPRSICNISSLELIQLAL 80 (833)
Q Consensus 1 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 80 (833)
|++|++++|++. .+|.+++.+..+..|+.+.|++ ..+|+.++.+.+|+.|+.++|.+. ..|+.++.+..|+.|+..+
T Consensus 70 l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~l-s~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~ 146 (565)
T KOG0472|consen 70 LTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKL-SELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLDATN 146 (565)
T ss_pred eeEEEeccchhh-hCCHHHHHHHHHHHhhcccchH-hhccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhhccc
Confidence 578999999999 7999999999999999999999 678889999999999999999998 7888899999999999999
Q ss_pred cccccccCchhhcCCCCccEEEccCCcceeeCCccccCCCCCcEEEcccCccccccCcCccCCCcCceEecccccCCCCC
Q 040925 81 NRFSGNLPFDIVVNLPNLKALAIGGNNFFGSIPYSLSNASNLELLDLSVNQFKGNVSIDFSSLKNLLWLNLEQNNLGTGT 160 (833)
Q Consensus 81 N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 160 (833)
|+++ .+|++++ .+.+|..|++.+|.++...|..+. ++.|++||...|-++.+ |..+++|.+|..|+|.+|+|...|
T Consensus 147 N~i~-slp~~~~-~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~tl-P~~lg~l~~L~~LyL~~Nki~~lP 222 (565)
T KOG0472|consen 147 NQIS-SLPEDMV-NLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLETL-PPELGGLESLELLYLRRNKIRFLP 222 (565)
T ss_pred cccc-cCchHHH-HHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhhcC-ChhhcchhhhHHHHhhhcccccCC
Confidence 9998 8887764 788899999999999865555554 88999999999988854 457888999999999999987655
Q ss_pred CCCcccccccCCCCCCCEEEccCCcCcccCChhHhhhcccccEEEccCccccccCChhhhcCCCCCeEeccCCcccccCC
Q 040925 161 ATDLDFVTFLTNCSSLKALSLADNQFGGELPHSIANLSSTVINFGIGRNQISGTIPPGIRNLVNLIGFGAEENQLHGTIP 240 (833)
Q Consensus 161 ~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 240 (833)
. |.+++.|++|+++.|+|. .+|.+.+.-.+.+..||+++|+++ ..|+.+.-+.+|+.||+++|.|+ ..|
T Consensus 223 e--------f~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp 291 (565)
T KOG0472|consen 223 E--------FPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLP 291 (565)
T ss_pred C--------CCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCC
Confidence 3 778888888999888888 788877755566778888899888 77888888888889999988888 466
Q ss_pred ccccCCCCCCEEEcccccCcc-----------------------------------------------------------
Q 040925 241 DAIGELKNLQKLCLFRNFLQG----------------------------------------------------------- 261 (833)
Q Consensus 241 ~~~~~l~~L~~L~L~~N~l~~----------------------------------------------------------- 261 (833)
..++++ +|+.|-+.+|.+..
T Consensus 292 ~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s 370 (565)
T KOG0472|consen 292 YSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVS 370 (565)
T ss_pred cccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhccc
Confidence 678888 88888888887651
Q ss_pred -----cCCccccCCC---CCCeEEeecccccCCCCCCCCCCCccc-eeecCCceecccCCcccccccccceeeecCCCcc
Q 040925 262 -----RIPSGLGNLT---KLANLELSSNSLQGNIPSSLGNCQNLM-SFTASQNKLTGALPHQLLSITTLSLYLDLSNNLL 332 (833)
Q Consensus 262 -----~~~~~~~~l~---~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~l~~N~l~~~~p~~~~~~~~ll~~L~ls~N~l 332 (833)
.+|+....-. -.+..+++.|++. .+|..+..+..+. .+.+++|.+. .+|..++.++++ ..|+|++|-+
T Consensus 371 ~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~is-fv~~~l~~l~kL-t~L~L~NN~L 447 (565)
T KOG0472|consen 371 DKQLTLVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKIS-FVPLELSQLQKL-TFLDLSNNLL 447 (565)
T ss_pred ccccccCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccc-cchHHHHhhhcc-eeeecccchh
Confidence 1111111111 1456789999998 7888888777654 4566777776 888899999998 7899999999
Q ss_pred CCCCCcccccCCCcCEEeccCCcCCCCCCccccCCCCCcEEeecCCccccccCccccCCCCCCeEEccCcccCCCchhhh
Q 040925 333 NGSLPLQVGHLKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNVSSNNLSGQIPEFL 412 (833)
Q Consensus 333 ~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l 412 (833)
. .+|..++.+..|+.||+|.|++. ..|..+..+..|+.+-.++|++..+.+..+.++.+|..|||.+|.+. .+|..+
T Consensus 448 n-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~L 524 (565)
T KOG0472|consen 448 N-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPIL 524 (565)
T ss_pred h-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhh
Confidence 8 78999999999999999999998 88998888888999989999999888888999999999999999998 788899
Q ss_pred cCCCCCceEECccCcCccccCCC
Q 040925 413 KNLSVLEFLSLSYNHFEGEVPTK 435 (833)
Q Consensus 413 ~~l~~L~~L~l~~N~l~~~~~~~ 435 (833)
+++++|++|++.+|+|. .|+..
T Consensus 525 gnmtnL~hLeL~gNpfr-~Pr~~ 546 (565)
T KOG0472|consen 525 GNMTNLRHLELDGNPFR-QPRHQ 546 (565)
T ss_pred ccccceeEEEecCCccC-CCHHH
Confidence 99999999999999999 44443
No 24
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-40 Score=347.19 Aligned_cols=269 Identities=27% Similarity=0.383 Sum_probs=216.2
Q ss_pred chHHHHHHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC--cchhHHHHHHHHHhhcCCCccceEeeEeec
Q 040925 522 SYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNIRHRNLIKIITICSS 599 (833)
Q Consensus 522 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 599 (833)
+..++....+...+.++||+|+||+||+|.|.++ ||||++..... +..+.|++|+.++++-+|.||+-+.|||..
T Consensus 383 s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whGd---VAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~ 459 (678)
T KOG0193|consen 383 SLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHGD---VAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMN 459 (678)
T ss_pred cccccccCHHHhhccceeccccccceeecccccc---eEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcC
Confidence 3456666667788889999999999999999754 99999976543 345789999999999999999999999876
Q ss_pred CCCCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCC
Q 040925 600 TDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM 679 (833)
Q Consensus 600 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~ 679 (833)
+. ..||+.+|+|-+|+.+++..+. +++..+.+.|+.||++|+.|||.+ +|||||||..||++.+++
T Consensus 460 p~------~AIiTqwCeGsSLY~hlHv~et-----kfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~ 525 (678)
T KOG0193|consen 460 PP------LAIITQWCEGSSLYTHLHVQET-----KFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDL 525 (678)
T ss_pred Cc------eeeeehhccCchhhhhccchhh-----hhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCC
Confidence 65 3899999999999999997653 799999999999999999999999 999999999999999999
Q ss_pred cEEEcccccccccCcccccccccCCCccccccccccccCccccCCC---CCCcccccccCCcCCCccccCCccHHHHHHH
Q 040925 680 VAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS---EASMTGDIFTGRRPIDAVFNEGHSLHEFAKT 756 (833)
Q Consensus 680 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~ 756 (833)
+|||+|||++..-........ .....|...|||||+++.+ +|+..+|||+ +|.++||++++
T Consensus 526 kVkIgDFGLatvk~~w~g~~q------~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYa----------FGiV~YELltg 589 (678)
T KOG0193|consen 526 KVKIGDFGLATVKTRWSGEQQ------LEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYA----------FGIVWYELLTG 589 (678)
T ss_pred cEEEecccceeeeeeeccccc------cCCCccchhhhcHHHHhhcccCCCCcccchhh----------hhHHHHHHHhC
Confidence 999999999975433211111 1223588899999998743 5899999888 89999999999
Q ss_pred hCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhhh
Q 040925 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRET 827 (833)
Q Consensus 757 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~~ 827 (833)
.+|+. .+..|.-+.+-...+ .-+..-.....+++++.+|+..||..+|++||.+.+|+..|+.+..+
T Consensus 590 ~lPys-i~~~dqIifmVGrG~---l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 590 ELPYS-IQNRDQIIFMVGRGY---LMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS 656 (678)
T ss_pred cCCcC-CCChhheEEEecccc---cCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence 99987 333333222111110 00111123456888999999999999999999999999999988775
No 25
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-41 Score=339.67 Aligned_cols=250 Identities=23% Similarity=0.329 Sum_probs=209.6
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
..|+..+.||+|+||.||+|.+..+++.||+|++..... ...+++.+|+.++.+++++||.++||.+.... ..+
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~-----~Lw 87 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGT-----KLW 87 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecc-----cHH
Confidence 357888999999999999999999999999999986643 44678999999999999999999999876554 889
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
++||||.||++.+.++... .+++..+.-++++++.|+.|+|++ +.+|||||+.||++..+|.+|++|||.+
T Consensus 88 iiMey~~gGsv~~lL~~~~------~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa 158 (467)
T KOG0201|consen 88 IIMEYCGGGSVLDLLKSGN------ILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVA 158 (467)
T ss_pred HHHHHhcCcchhhhhccCC------CCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEeccee
Confidence 9999999999999998765 458888888999999999999999 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPS 769 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~ 769 (833)
..+.... .+...++|||.|||||++.+..|+.|+|||| .|++.+|+++|..|+...... +
T Consensus 159 ~ql~~~~--------~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWS----------LGITaiEla~GePP~s~~hPm--r 218 (467)
T KOG0201|consen 159 GQLTNTV--------KRRKTFVGTPFWMAPEVIKQSGYDTKADIWS----------LGITAIELAKGEPPHSKLHPM--R 218 (467)
T ss_pred eeeechh--------hccccccccccccchhhhccccccchhhhhh----------hhHHHHHHhcCCCCCcccCcc--e
Confidence 8765532 2234678999999999999999999999999 899999999999998633321 1
Q ss_pred chhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 770 LLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.+.- +.+ ...+... .++.+.+.+++..|+.+||+.||||.+++++
T Consensus 219 vlfl-Ipk----~~PP~L~-~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 219 VLFL-IPK----SAPPRLD-GDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred EEEe-ccC----CCCCccc-cccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 1111 111 1111222 2577889999999999999999999999875
No 26
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-40 Score=306.34 Aligned_cols=279 Identities=19% Similarity=0.216 Sum_probs=220.2
Q ss_pred HHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 528 KATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 528 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
...++|++.+.+|+|||+.||.++.-.+++.||+|++.....+..+...+|++..++++||||+++++++....-+++..
T Consensus 18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~ 97 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE 97 (302)
T ss_pred EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence 34468999999999999999999999999999999998887777889999999999999999999999887665556778
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.|++++|+..|||.+.+......+. .+++.+++.|+.++++||++||+. .|+++||||||.||++++++.++|.|||
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~k~kg~--~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~G 174 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERLKIKGN--FVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLG 174 (302)
T ss_pred EEEEeehhccccHHHHHHHHhhcCC--ccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEecc
Confidence 9999999999999999987654332 699999999999999999999998 4569999999999999999999999999
Q ss_pred cccccCccccccc-ccCCCccccccccccccCccccC---CCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccc
Q 040925 688 LAKFLSDHQLDTA-VKTPSSSIGLKGTVGYVAPEYGM---GSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVM 763 (833)
Q Consensus 688 ~a~~~~~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~ 763 (833)
.++...-.-.... ............|..|+|||.+. +...++++|||| +|+++|.++.+..|++..
T Consensus 175 S~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWS----------LGCtLYa~mf~~sPfe~~ 244 (302)
T KOG2345|consen 175 SATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWS----------LGCTLYAMMFGESPFERI 244 (302)
T ss_pred CccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhh----------hhHHHHHHHHcCCcchHH
Confidence 9976543211000 00011112245799999999754 556789999999 788888888888887733
Q ss_pred ccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 040925 764 EIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHT 824 (833)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i 824 (833)
..-...+...+.......+.. ..++..+.+++.+|++.||.+||++.+++..+..+
T Consensus 245 ~~~GgSlaLAv~n~q~s~P~~-----~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 245 YQQGGSLALAVQNAQISIPNS-----SRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred hhcCCeEEEeeeccccccCCC-----CCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 222223322222222222211 12677899999999999999999999999988764
No 27
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-39 Score=342.16 Aligned_cols=251 Identities=24% Similarity=0.318 Sum_probs=206.9
Q ss_pred HHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeecc----CC-cchhHHHHHHHHHhhcC-CCccceEeeEeecCC
Q 040925 528 KATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK----YK-GASRSFVAECEALRNIR-HRNLIKIITICSSTD 601 (833)
Q Consensus 528 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 601 (833)
...++|.+.+.||+|+||+|+.|.+..+++.||+|+++.. .. ...+.+.+|+.++++++ ||||++++.++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 4567899999999999999999999999999999987643 11 23456778999999999 999999999976655
Q ss_pred CCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCC-Cc
Q 040925 602 FKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHD-MV 680 (833)
Q Consensus 602 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~-~~ 680 (833)
.+++||||+.||+|.+++...+ ++.+..++++++|++.|++|+|++ ||+||||||+||+++.+ ++
T Consensus 94 -----~~~ivmEy~~gGdL~~~i~~~g------~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~ 159 (370)
T KOG0583|consen 94 -----KIYIVMEYCSGGDLFDYIVNKG------RLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGN 159 (370)
T ss_pred -----eEEEEEEecCCccHHHHHHHcC------CCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCC
Confidence 7999999999999999999854 789999999999999999999999 99999999999999999 99
Q ss_pred EEEcccccccccCcccccccccCCCccccccccccccCccccCCCC-CC-cccccccCCcCCCccccCCccHHHHHHHhC
Q 040925 681 AHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSE-AS-MTGDIFTGRRPIDAVFNEGHSLHEFAKTAL 758 (833)
Q Consensus 681 ~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~ 758 (833)
+||+|||++..... ........+||+.|+|||++.+.. |+ .++|||| .|+++|.++.|..
T Consensus 160 ~Kl~DFG~s~~~~~--------~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS----------~GViLy~ml~G~~ 221 (370)
T KOG0583|consen 160 LKLSDFGLSAISPG--------EDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWS----------LGVILYVLLCGRL 221 (370)
T ss_pred EEEeccccccccCC--------CCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhh----------hHHHHHHHHhCCC
Confidence 99999999987631 112233468999999999999987 86 8899999 8999999999999
Q ss_pred CCcccccccccchhhhccccchhhhhhhhchHHH-HHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 759 PEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEEC-LNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 759 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
|+.... .+.+......... ..+..+ ...+..++.+|+..||.+|+|+.+|++
T Consensus 222 PF~d~~--~~~l~~ki~~~~~-------~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 222 PFDDSN--VPNLYRKIRKGEF-------KIPSYLLSPEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred CCCCcc--HHHHHHHHhcCCc-------cCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 987522 1122111111111 112222 567789999999999999999999984
No 28
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.3e-39 Score=356.12 Aligned_cols=266 Identities=24% Similarity=0.405 Sum_probs=214.8
Q ss_pred cCCccCceeccCcceEEEEEEEC-----CCceEEEEEEeeccCCc-chhHHHHHHHHHhhcCCCccceEeeEeecCCCCC
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLG-----EDEMIVAVKVINLKYKG-ASRSFVAECEALRNIRHRNLIKIITICSSTDFKG 604 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 604 (833)
.+.+..+.||+|+||+||+|+.. +....||||.++..... ...+|++|++.++.++|||||+++|+|...+
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~--- 562 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGD--- 562 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCC---
Confidence 45566789999999999999874 24568999999876655 6789999999999999999999999998776
Q ss_pred CceEeEEEEecCCCChhhhhccCCCccc--------cccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeec
Q 040925 605 TDFKAFVFEYMENGSLKDWLHQSDDQVE--------VCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLD 676 (833)
Q Consensus 605 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~--------~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~ 676 (833)
-.|+|+|||..|||.+++........ ..+++..+.+.||.|||.|+.||-++ .+|||||..+|+||+
T Consensus 563 --P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVg 637 (774)
T KOG1026|consen 563 --PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVG 637 (774)
T ss_pred --eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceec
Confidence 78999999999999999986553211 23488999999999999999999999 999999999999999
Q ss_pred CCCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHH
Q 040925 677 HDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKT 756 (833)
Q Consensus 677 ~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~ 756 (833)
+...|||+|||+++.+-...+..... ...-..+|||||.+..++++++|||||.|+.+|++|+.|...|+-++
T Consensus 638 e~l~VKIsDfGLsRdiYssDYYk~~~------~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glS- 710 (774)
T KOG1026|consen 638 ENLVVKISDFGLSRDIYSSDYYKVRG------NTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLS- 710 (774)
T ss_pred cceEEEecccccchhhhhhhhhcccC------CceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccc-
Confidence 99999999999999765544332210 12346799999999999999999999999999999998865443111
Q ss_pred hCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhhh
Q 040925 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRET 827 (833)
Q Consensus 757 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~~ 827 (833)
+.+. .+.++... .-..++.||.++..||..||+.+|++||+++||...|+...+.
T Consensus 711 ----------n~EV-Ie~i~~g~-----lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~ 765 (774)
T KOG1026|consen 711 ----------NQEV-IECIRAGQ-----LLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA 765 (774)
T ss_pred ----------hHHH-HHHHHcCC-----cccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence 1111 11111111 1234677899999999999999999999999999999987654
No 29
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=8.6e-40 Score=337.10 Aligned_cols=248 Identities=28% Similarity=0.410 Sum_probs=206.9
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC--cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceE
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
++|.+.+.||+|+||.||+|+.+.+.+.||+|.+.+..+ .+.+.+.+|++|+++++|||||.++++| +...+.
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esf-----Et~~~~ 76 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESF-----ETSAHL 76 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhh-----cccceE
Confidence 579999999999999999999999999999999965432 3456799999999999999999999984 555599
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
|+|+||+.| +|..++...+ .++++++..++.|++.||.|||+. +|+|||+||.||++++.|.+|+||||+
T Consensus 77 ~vVte~a~g-~L~~il~~d~------~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~ 146 (808)
T KOG0597|consen 77 WVVTEYAVG-DLFTILEQDG------KLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGL 146 (808)
T ss_pred EEEehhhhh-hHHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhh
Confidence 999999986 9999998876 799999999999999999999999 999999999999999999999999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccc
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDP 768 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~ 768 (833)
|+.+..... ....+.|||.|||||+..+++|+..+|+|| .|+++||++.|..|+-...+..
T Consensus 147 Ar~m~~~t~--------vltsikGtPlYmAPElv~e~pyd~~sDlWs----------lGcilYE~~~G~PPF~a~si~~- 207 (808)
T KOG0597|consen 147 ARAMSTNTS--------VLTSIKGTPLYMAPELVEEQPYDHTSDLWS----------LGCILYELYVGQPPFYARSITQ- 207 (808)
T ss_pred hhhcccCce--------eeeeccCcccccCHHHHcCCCccchhhHHH----------HHHHHHHHhcCCCCchHHHHHH-
Confidence 998765322 233467999999999999999999999999 7888889888888875333211
Q ss_pred cchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 769 SLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
+....... +...+......+..++...+.+||.+|.|..+++.+
T Consensus 208 -Lv~~I~~d-------~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 208 -LVKSILKD-------PVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred -HHHHHhcC-------CCCCcccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 11111111 111223456678899999999999999999998764
No 30
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-39 Score=309.94 Aligned_cols=238 Identities=24% Similarity=0.245 Sum_probs=200.6
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCc
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTD 606 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 606 (833)
.++|++.+.||.|+||.|.+++.+.+|..||+|+++.+. ....+...+|.++|+.+.||+++++++.+.+.+
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~----- 117 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNS----- 117 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCC-----
Confidence 347889999999999999999999999999999997542 223456788999999999999999999876655
Q ss_pred eEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccc
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDF 686 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 686 (833)
+.++||||++||.|..++.+.+ ++++..++.++.||+.|++|||+. +|++||+||+|||+|.+|.+||+||
T Consensus 118 ~lymvmeyv~GGElFS~Lrk~~------rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDF 188 (355)
T KOG0616|consen 118 NLYMVMEYVPGGELFSYLRKSG------RFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDF 188 (355)
T ss_pred eEEEEEeccCCccHHHHHHhcC------CCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEec
Confidence 9999999999999999999876 799999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccc
Q 040925 687 GLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIV 766 (833)
Q Consensus 687 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~ 766 (833)
|+|+.+... +...+|||.|+|||++...+|..++|+|+ +|+.+|||+.|..|+......
T Consensus 189 GFAK~v~~r-----------T~TlCGTPeYLAPEii~sk~ynkavDWWa----------lGVLIYEMlaG~pPF~~~~~~ 247 (355)
T KOG0616|consen 189 GFAKRVSGR-----------TWTLCGTPEYLAPEIIQSKGYNKAVDWWA----------LGVLIYEMLAGYPPFYDDNPI 247 (355)
T ss_pred cceEEecCc-----------EEEecCCccccChHHhhcCCCCcchhHHH----------HHHHHHHHHcCCCCCcCCChH
Confidence 999977653 22468999999999999999999999999 899999999999998643321
Q ss_pred cccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCC
Q 040925 767 DPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFER 811 (833)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 811 (833)
.-. ..... .+-..+..+...+.+++...++.|-.+|
T Consensus 248 ~iY--~KI~~-------~~v~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 248 QIY--EKILE-------GKVKFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred HHH--HHHHh-------CcccCCcccCHHHHHHHHHHHhhhhHhh
Confidence 100 00111 1112344556678889999999999888
No 31
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.4e-39 Score=337.82 Aligned_cols=249 Identities=22% Similarity=0.312 Sum_probs=210.3
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCc
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTD 606 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 606 (833)
.+-|+..+.||.|+.|.|-.|++..||+.+|||++.... ......+.+|+.+|+-+.||||+++|+++....
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~----- 85 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQ----- 85 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCc-----
Confidence 467999999999999999999999999999999996542 223467899999999999999999999965544
Q ss_pred eEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccc
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDF 686 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 686 (833)
+.|+|.||+++|-|.+++-.++ ++++.++.++++||+.|+.|+|.. +|+|||+||+|+|+|+.+.+||+||
T Consensus 86 ~lylvlEyv~gGELFdylv~kG------~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADF 156 (786)
T KOG0588|consen 86 HLYLVLEYVPGGELFDYLVRKG------PLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADF 156 (786)
T ss_pred eEEEEEEecCCchhHHHHHhhC------CCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeecc
Confidence 9999999999999999999877 799999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCcccccccccCCCccccccccccccCccccCCCCC-CcccccccCCcCCCccccCCccHHHHHHHhCCCccccc
Q 040925 687 GLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEA-SMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEI 765 (833)
Q Consensus 687 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~ 765 (833)
|+|..-.++.. ....||+|.|.|||++.|.+| ..++|||| .|+++|.+++|.+|++...
T Consensus 157 GMAsLe~~gkl---------LeTSCGSPHYA~PEIV~G~pYdG~~sDVWS----------CGVILfALLtG~LPFdDdN- 216 (786)
T KOG0588|consen 157 GMASLEVPGKL---------LETSCGSPHYAAPEIVSGRPYDGRPSDVWS----------CGVILFALLTGKLPFDDDN- 216 (786)
T ss_pred ceeecccCCcc---------ccccCCCcccCCchhhcCCCCCCCccccch----------hHHHHHHHHhCCCCCCCcc-
Confidence 99986544332 234589999999999999998 48899999 8999999999999987222
Q ss_pred ccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 766 VDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
++ .+...+.... -..+..++.+..+|+.+|+..||++|.|++||+++
T Consensus 217 ir-~LLlKV~~G~-------f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 217 IR-VLLLKVQRGV-------FEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred HH-HHHHHHHcCc-------ccCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 11 1111222222 12345567788999999999999999999999986
No 32
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-39 Score=333.27 Aligned_cols=244 Identities=27% Similarity=0.417 Sum_probs=204.4
Q ss_pred cCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEEEe
Q 040925 535 SSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEY 614 (833)
Q Consensus 535 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 614 (833)
..+-||+|+.|.||+|+.+ ++.||||+++.- -..++.-|++|+||||+.+.|+|.... .+||||||
T Consensus 128 ELeWlGSGaQGAVF~Grl~--netVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVCtqsP-----cyCIiMEf 193 (904)
T KOG4721|consen 128 ELEWLGSGAQGAVFLGRLH--NETVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVCTQSP-----CYCIIMEF 193 (904)
T ss_pred hhhhhccCcccceeeeecc--CceehhHHHhhh-------hhhhHHHHHhccCcceeeEeeeecCCc-----eeEEeeec
Confidence 3568999999999999995 788999998522 234788899999999999999998776 89999999
Q ss_pred cCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccCc
Q 040925 615 MENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSD 694 (833)
Q Consensus 615 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 694 (833)
|+.|-|+++++..+ .++......|..+||.|+.|||.+ .|||||||.-||||+.+..|||+|||-++...+
T Consensus 194 Ca~GqL~~VLka~~------~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~ 264 (904)
T KOG4721|consen 194 CAQGQLYEVLKAGR------PITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSD 264 (904)
T ss_pred cccccHHHHHhccC------ccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhh
Confidence 99999999999876 788999999999999999999999 999999999999999999999999999986544
Q ss_pred ccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchhhh
Q 040925 695 HQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEV 774 (833)
Q Consensus 695 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~~~ 774 (833)
. .-...++||..|||||++...+.+.|+|||| +|+++||++++..|+...+ ...+...+
T Consensus 265 ~---------STkMSFaGTVaWMAPEvIrnePcsEKVDIwS----------fGVVLWEmLT~EiPYkdVd--ssAIIwGV 323 (904)
T KOG4721|consen 265 K---------STKMSFAGTVAWMAPEVIRNEPCSEKVDIWS----------FGVVLWEMLTGEIPYKDVD--SSAIIWGV 323 (904)
T ss_pred h---------hhhhhhhhhHhhhCHHHhhcCCcccccceeh----------hHHHHHHHHhcCCCccccc--hheeEEec
Confidence 2 1234578999999999999999999999999 8999999999999976322 11221111
Q ss_pred ccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhhh
Q 040925 775 MTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRET 827 (833)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~~ 827 (833)
-.+.. .-+.++.|++-+.=++.+||+-.|..||++++|+..|.-....
T Consensus 324 GsNsL-----~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pe 371 (904)
T KOG4721|consen 324 GSNSL-----HLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPE 371 (904)
T ss_pred cCCcc-----cccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHH
Confidence 11111 1234567888899999999999999999999999998765544
No 33
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.5e-38 Score=329.01 Aligned_cols=263 Identities=19% Similarity=0.232 Sum_probs=205.8
Q ss_pred HHHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCC
Q 040925 527 SKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFK 603 (833)
Q Consensus 527 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 603 (833)
....++|++.+.||+|+||.||+|+.+.+|..||+|++++.. ....+.++.|-.+|....+|.||++|..|.+
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD---- 212 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQD---- 212 (550)
T ss_pred cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecC----
Confidence 345678999999999999999999999999999999997542 3445678899999999999999999988554
Q ss_pred CCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEE
Q 040925 604 GTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683 (833)
Q Consensus 604 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 683 (833)
..+.|+||||++||++..++...+ .+++..++.++.+++.|+.-+|.. |+|||||||+|+|||..|.+||
T Consensus 213 -~~~LYLiMEylPGGD~mTLL~~~~------~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKL 282 (550)
T KOG0605|consen 213 -KEYLYLIMEYLPGGDMMTLLMRKD------TLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKL 282 (550)
T ss_pred -CCeeEEEEEecCCccHHHHHHhcC------cCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEee
Confidence 459999999999999999999876 799999999999999999999999 9999999999999999999999
Q ss_pred cccccccccCcccc-------------------cccc-----c---------------CCCccccccccccccCccccCC
Q 040925 684 CDFGLAKFLSDHQL-------------------DTAV-----K---------------TPSSSIGLKGTVGYVAPEYGMG 724 (833)
Q Consensus 684 ~DfG~a~~~~~~~~-------------------~~~~-----~---------------~~~~~~~~~gt~~y~aPE~~~~ 724 (833)
+|||+|.-...... .... . ......+.+|||-|||||++.+
T Consensus 283 SDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~ 362 (550)
T KOG0605|consen 283 SDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLG 362 (550)
T ss_pred ccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhc
Confidence 99999854321000 0000 0 0011235789999999999999
Q ss_pred CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccC
Q 040925 725 SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCS 804 (833)
Q Consensus 725 ~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 804 (833)
..|+..+|+|| .|+++||++.|..|+.........-........+.. +...++.++..++|.+|+
T Consensus 363 kgY~~~cDwWS----------LG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~f-----P~~~~~s~eA~DLI~rll 427 (550)
T KOG0605|consen 363 KGYGKECDWWS----------LGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKF-----PEEVDLSDEAKDLITRLL 427 (550)
T ss_pred CCCCccccHHH----------HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccC-----CCcCcccHHHHHHHHHHh
Confidence 99999999999 889999999999998743322111111111111111 111223467789999999
Q ss_pred CCCCCCCCC---HHHHHH
Q 040925 805 MESPFERMD---MRDVVA 819 (833)
Q Consensus 805 ~~dP~~RPt---~~eil~ 819 (833)
. ||++|-. ++||-+
T Consensus 428 ~-d~~~RLG~~G~~EIK~ 444 (550)
T KOG0605|consen 428 C-DPENRLGSKGAEEIKK 444 (550)
T ss_pred c-CHHHhcCcccHHHHhc
Confidence 9 9999975 555543
No 34
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-39 Score=319.12 Aligned_cols=276 Identities=22% Similarity=0.295 Sum_probs=208.3
Q ss_pred HhcCCccCceeccCcceEEEEEEECCCceEEEEEEee--ccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCc
Q 040925 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVIN--LKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTD 606 (833)
Q Consensus 529 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 606 (833)
....|...+.||+|+||.|+.|+++.+|+.||+|++. .......++..+|++++++++|+||+.+++++..+....-.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 3456777899999999999999999999999999997 33445568899999999999999999999998774444455
Q ss_pred eEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccc
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDF 686 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 686 (833)
.+|+|+|+|+ -+|.+.++.++ .++...+..+++|+++||+|+|+. +|+|||+||+|++++.+..+||+||
T Consensus 100 DvYiV~elMe-tDL~~iik~~~------~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DF 169 (359)
T KOG0660|consen 100 DVYLVFELME-TDLHQIIKSQQ------DLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDF 169 (359)
T ss_pred eeEEehhHHh-hHHHHHHHcCc------cccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccc
Confidence 7999999995 59999999875 589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCcccccccccCCCccccccccccccCcccc-CCCCCCcccccccCCcCCCccccC-----Cc-cHHH--HHHHh
Q 040925 687 GLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYG-MGSEASMTGDIFTGRRPIDAVFNE-----GH-SLHE--FAKTA 757 (833)
Q Consensus 687 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~s~~~~~~~~~~~-----g~-~l~~--~~~~~ 757 (833)
|+|+..... ......+..+.|.+|+|||++ ....|+.+.||||.||.+.++..+ |. .+.+ +....
T Consensus 170 GLAR~~~~~------~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~ 243 (359)
T KOG0660|consen 170 GLARYLDKF------FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILEL 243 (359)
T ss_pred cceeecccc------CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHh
Confidence 999987543 112234557899999999975 456799999999988887776542 21 1111 11221
Q ss_pred C---CCcccccccccchhhhccccchhhhhh-hhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 758 L---PEKVMEIVDPSLLMEVMTNNSMIQEDK-RVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 758 ~---p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
. +......+.......++......++.. ....+...+...+++.+||..||.+|+|++|.++.
T Consensus 244 lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 244 LGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred cCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 1 112222222222222333222111111 11122455678899999999999999999999875
No 35
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.2e-38 Score=309.58 Aligned_cols=268 Identities=21% Similarity=0.287 Sum_probs=198.3
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC--cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceE
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
++|+...+|++|+||.||+|+++.+++.||+|+++.... +..-...+|+.++.+++|||||.+..+....+ -+.+
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~---~d~i 152 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSN---MDKI 152 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccc---ccee
Confidence 458888999999999999999999999999999975432 22345689999999999999999999876554 3469
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
|+|||||+. +|..+++..+. ++...++..++.|+++|++|||.. .|+||||||+|+|++..|.+||+|||+
T Consensus 153 y~VMe~~Eh-DLksl~d~m~q-----~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGL 223 (419)
T KOG0663|consen 153 YIVMEYVEH-DLKSLMETMKQ-----PFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGL 223 (419)
T ss_pred eeeHHHHHh-hHHHHHHhccC-----CCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccch
Confidence 999999987 99999987653 799999999999999999999999 999999999999999999999999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccCCCC-CCcccccccCCcCCCccccC-----C-ccHHH---HHH--H
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSE-ASMTGDIFTGRRPIDAVFNE-----G-HSLHE---FAK--T 756 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~s~~~~~~~~~~~-----g-~~l~~---~~~--~ 756 (833)
|+.++.+.. ..+..+-|.+|+|||.+.+.+ |+++.|+||.||.+.++... | .-+.+ ++. |
T Consensus 224 AR~ygsp~k--------~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llG 295 (419)
T KOG0663|consen 224 AREYGSPLK--------PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLG 295 (419)
T ss_pred hhhhcCCcc--------cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhC
Confidence 998876521 233467899999999988765 99999999988877664321 1 11111 111 1
Q ss_pred hCCCccccccc-ccch--hhhccccchhhhhhhhchH-HHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 757 ALPEKVMEIVD-PSLL--MEVMTNNSMIQEDKRVKTE-ECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 757 ~~p~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
...+.++..++ ...+ ........ ......... ...+.-.+++...+..||.+|.|++|.++.
T Consensus 296 tPte~iwpg~~~lp~~k~~~f~~~py--n~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 296 TPSEAIWPGYSELPAVKKMTFSEHPY--NNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred CCccccCCCccccchhhccccCCCCc--hhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 11111222111 1111 01111111 000111111 133566789999999999999999998764
No 36
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-38 Score=321.72 Aligned_cols=263 Identities=23% Similarity=0.298 Sum_probs=201.9
Q ss_pred HHHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC---------C-----cchhHHHHHHHHHhhcCCCccce
Q 040925 527 SKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---------K-----GASRSFVAECEALRNIRHRNLIK 592 (833)
Q Consensus 527 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---------~-----~~~~~~~~E~~~l~~l~h~niv~ 592 (833)
.+..+.|++.+.||+|.||.|-+|++..+++.||||++.... . ...+...+|+.+|++++|||||+
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 355678999999999999999999999999999999996331 0 11257899999999999999999
Q ss_pred EeeEeecCCCCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCC
Q 040925 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSN 672 (833)
Q Consensus 593 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~N 672 (833)
++.+..+.. .+.+|||+|||..|.+...=.... .+++.++++|+++++.||+|||.+ |||||||||+|
T Consensus 173 LiEvLDDP~---s~~~YlVley~s~G~v~w~p~d~~------els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsN 240 (576)
T KOG0585|consen 173 LIEVLDDPE---SDKLYLVLEYCSKGEVKWCPPDKP------ELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSN 240 (576)
T ss_pred EEEeecCcc---cCceEEEEEeccCCccccCCCCcc------cccHHHHHHHHHHHHHHHHHHHhc---Ceeccccchhh
Confidence 999976654 568999999999887754322221 389999999999999999999999 99999999999
Q ss_pred eeecCCCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCC----CCcccccccCCcCCCccccCCc
Q 040925 673 VLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSE----ASMTGDIFTGRRPIDAVFNEGH 748 (833)
Q Consensus 673 Ill~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Di~s~~~~~~~~~~~g~ 748 (833)
+|++++|+|||+|||.+.......... ........+|||.|||||...++. .+.+.|||+ .|+
T Consensus 241 LLl~~~g~VKIsDFGVs~~~~~~~~~~---~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWa----------lGV 307 (576)
T KOG0585|consen 241 LLLSSDGTVKISDFGVSNEFPQGSDEG---SDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWA----------LGV 307 (576)
T ss_pred eEEcCCCcEEeeccceeeecccCCccc---cHHHHhhcCCCccccchHhhcCCCCccccchhhhhhh----------hhh
Confidence 999999999999999998664321111 111122367999999999876632 356778888 899
Q ss_pred cHHHHHHHhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 040925 749 SLHEFAKTALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKL 821 (833)
Q Consensus 749 ~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 821 (833)
++|.++.|..|+......+ +....+.... .-+..++....+.++|.++|.+||++|.+..+|..+.
T Consensus 308 TLYCllfG~~PF~~~~~~~--l~~KIvn~pL-----~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hp 373 (576)
T KOG0585|consen 308 TLYCLLFGQLPFFDDFELE--LFDKIVNDPL-----EFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHP 373 (576)
T ss_pred hHHHhhhccCCcccchHHH--HHHHHhcCcc-----cCCCcccccHHHHHHHHHHhhcChhheeehhhheecc
Confidence 9999999999986222111 1111111111 1122334567889999999999999999999987653
No 37
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.6e-39 Score=317.85 Aligned_cols=268 Identities=24% Similarity=0.360 Sum_probs=195.4
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEE
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFV 611 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 611 (833)
.|...+.+|+|+||.||+|...++++.||||++....+ .--+|+.+|+.++|||||++..++......+.-+..+|
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 57778999999999999999999999999999864432 33469999999999999999998877653323466789
Q ss_pred EEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCC-CcEEEccccccc
Q 040925 612 FEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHD-MVAHVCDFGLAK 690 (833)
Q Consensus 612 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kL~DfG~a~ 690 (833)
|||+|. ||.++++..... ...++...++-+.+||.+||+|||+. +|+||||||+|+|+|.+ |.+||||||.|+
T Consensus 101 leymP~-tL~~~~r~~~~~--~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK 174 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIRHYTRA--NQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAK 174 (364)
T ss_pred HHhchH-HHHHHHHHHhhc--CCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcce
Confidence 999996 999999853111 11688889999999999999999998 99999999999999977 899999999999
Q ss_pred ccCcccccccccCCCccccccccccccCccccCCC-CCCcccccccCCcCCCccccCCc---------cHHHHHHHhCCC
Q 040925 691 FLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS-EASMTGDIFTGRRPIDAVFNEGH---------SLHEFAKTALPE 760 (833)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Di~s~~~~~~~~~~~g~---------~l~~~~~~~~p~ 760 (833)
....... ..+...|..|+|||.+.|. .|+.+.||||.||.+.|+..++. .+.++..---.+
T Consensus 175 ~L~~~ep---------niSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~P 245 (364)
T KOG0658|consen 175 VLVKGEP---------NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTP 245 (364)
T ss_pred eeccCCC---------ceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCC
Confidence 8765432 2345689999999998875 49999999998888777654322 122222211111
Q ss_pred --cccccccccchhhhccccchhhhh-hhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 761 --KVMEIVDPSLLMEVMTNNSMIQED-KRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 761 --~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
+......+... + .......... .+......+++..+++.+++.++|.+|.++.|++..
T Consensus 246 t~e~I~~mn~~y~-~-~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 246 TREDIKSMNPNYT-E-FKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred CHHHHhhcCcccc-c-ccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 11111111110 0 0000000000 112334456778999999999999999999999865
No 38
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=7e-38 Score=338.59 Aligned_cols=268 Identities=21% Similarity=0.331 Sum_probs=203.1
Q ss_pred HhcCCccCceeccCcceEEEEEEEC-----CCceEEEEEEeeccCC-cchhHHHHHHHHHhhc-CCCccceEeeEeecCC
Q 040925 529 ATGEFSSSNMIGQGSFGYVYKGTLG-----EDEMIVAVKVINLKYK-GASRSFVAECEALRNI-RHRNLIKIITICSSTD 601 (833)
Q Consensus 529 ~~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 601 (833)
..++|++.+.||+|+||.||+|.+. .+++.||||+++.... ...+.+.+|+++++++ +||||+++++++....
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 3468999999999999999999752 3457899999974422 2345789999999999 8999999999875432
Q ss_pred CCCCceEeEEEEecCCCChhhhhccCCCcc--------------------------------------------------
Q 040925 602 FKGTDFKAFVFEYMENGSLKDWLHQSDDQV-------------------------------------------------- 631 (833)
Q Consensus 602 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-------------------------------------------------- 631 (833)
...++||||+++|+|.+++.......
T Consensus 85 ----~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (338)
T cd05102 85 ----GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPP 160 (338)
T ss_pred ----CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccc
Confidence 46899999999999999997532100
Q ss_pred ------ccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccCcccccccccCCC
Q 040925 632 ------EVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPS 705 (833)
Q Consensus 632 ------~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~ 705 (833)
....+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 161 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~------ 231 (338)
T cd05102 161 QETDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV------ 231 (338)
T ss_pred hhccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchh------
Confidence 012478889999999999999999999 99999999999999999999999999998653321110
Q ss_pred ccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCcccccccccchhhhccccchhhhh
Q 040925 706 SSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEIVDPSLLMEVMTNNSMIQED 784 (833)
Q Consensus 706 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 784 (833)
......+++.|+|||++.+..++.++|||| +|++++++++ +..|+..... +............
T Consensus 232 ~~~~~~~~~~y~aPE~~~~~~~~~~sDiws----------lG~il~el~~~g~~pf~~~~~-~~~~~~~~~~~~~----- 295 (338)
T cd05102 232 RKGSARLPLKWMAPESIFDKVYTTQSDVWS----------FGVLLWEIFSLGASPYPGVQI-NEEFCQRLKDGTR----- 295 (338)
T ss_pred cccCCCCCccccCcHHhhcCCCCcccCHHH----------HHHHHHHHHhCCCCCCCCCCc-cHHHHHHHhcCCC-----
Confidence 111234678899999999999999999999 7888888876 6666542211 1111111111100
Q ss_pred hhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhh
Q 040925 785 KRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRE 826 (833)
Q Consensus 785 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~ 826 (833)
...+..+++.+.+++.+||+.||++|||+.|+++.|+.+.+
T Consensus 296 -~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 296 -MRAPENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred -CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 01122345678999999999999999999999999998765
No 39
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.2e-38 Score=328.58 Aligned_cols=254 Identities=21% Similarity=0.306 Sum_probs=213.0
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC--CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
.++|..++.+|+|+||.++.++++.++..||+|.+.... ....+...+|+.++++++|||||.+.+.+...+ ..
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~----~~ 78 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDG----QL 78 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCC----ce
Confidence 357999999999999999999999999999999997543 334567899999999999999999999865444 34
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.+|||+||+||++.+.+++.++. .++++++..|+.|++.|+.|||+. +|+|||||++||++++++.|||+|||
T Consensus 79 l~Ivm~Y~eGg~l~~~i~~~k~~----~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfG 151 (426)
T KOG0589|consen 79 LCIVMEYCEGGDLAQLIKEQKGV----LFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFG 151 (426)
T ss_pred EEEEEeecCCCCHHHHHHHHhhc----cccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchh
Confidence 99999999999999999987633 689999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD 767 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~ 767 (833)
+|+.+..+. ....+++|||.||+||++.+.+|..|+|||| .|+.+||+.+-..++...+..
T Consensus 152 laK~l~~~~--------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWs----------LGC~~yEm~~lk~aF~a~~m~- 212 (426)
T KOG0589|consen 152 LAKILNPED--------SLASTVVGTPYYMCPEILSDIPYNEKSDIWS----------LGCCLYEMCTLKPAFKASNMS- 212 (426)
T ss_pred hhhhcCCch--------hhhheecCCCcccCHHHhCCCCCCccCcchh----------hcchHHHHHhcccccCccchH-
Confidence 999887643 1233468999999999999999999999999 788888988888777643321
Q ss_pred ccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 768 PSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.+........ ..+.+..+..++..++..|+..+|+.||++.+++.+
T Consensus 213 -~Li~ki~~~~------~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 213 -ELILKINRGL------YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred -HHHHHHhhcc------CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 1111111111 123455677889999999999999999999999987
No 40
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-38 Score=295.50 Aligned_cols=250 Identities=21% Similarity=0.304 Sum_probs=208.8
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeecc---CCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCc
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK---YKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTD 606 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 606 (833)
.++|++.+.||+|.||.||.|+.+.++-.||+|++... ..+....+.+|++|-+.++||||+++|+++.+..
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~----- 95 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSK----- 95 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccc-----
Confidence 45799999999999999999999999999999998533 2344578999999999999999999999976655
Q ss_pred eEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccc
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDF 686 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 686 (833)
.+|+++||.++|+++..+...+.. ++++.....++.|+|.|+.|+|.. +||||||||+|+|++..+..||+||
T Consensus 96 riyLilEya~~gel~k~L~~~~~~----~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdf 168 (281)
T KOG0580|consen 96 RIYLILEYAPRGELYKDLQEGRMK----RFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADF 168 (281)
T ss_pred eeEEEEEecCCchHHHHHHhcccc----cccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCC
Confidence 999999999999999999965543 789999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccc
Q 040925 687 GLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIV 766 (833)
Q Consensus 687 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~ 766 (833)
|.+...+. .+....+||.-|.|||...+..++..+|+|+ .|+..||++.+..|+....
T Consensus 169 GwsV~~p~----------~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~----------lgvl~yeflvg~ppFes~~-- 226 (281)
T KOG0580|consen 169 GWSVHAPS----------NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWS----------LGVLCYEFLVGLPPFESQS-- 226 (281)
T ss_pred CceeecCC----------CCceeeecccccCCHhhcCCCCccchhhHHH----------HHHHHHHHHhcCCchhhhh--
Confidence 99875432 2233578999999999999999999999999 8888999999999987333
Q ss_pred cccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 767 DPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
..+.-....+.+. ..++.++....++|.+|+.++|.+|.+..|+++.
T Consensus 227 ~~etYkrI~k~~~-------~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 227 HSETYKRIRKVDL-------KFPSTISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred hHHHHHHHHHccc-------cCCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 1111111111111 1224456678899999999999999999999875
No 41
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.7e-38 Score=314.59 Aligned_cols=248 Identities=22% Similarity=0.319 Sum_probs=205.0
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
-+|++.+.||+|.||.|-+|+....|+.||||.++... +++.-.+++|++||+.++||||+.+|.+ |+..+.
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEV-----FENkdK 127 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEV-----FENKDK 127 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhh-----hcCCce
Confidence 47999999999999999999998899999999997543 3334568999999999999999999999 555569
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
+.+||||..+|.|++|+.+.+ .+++.+++.+++||+.|+.|+|.. +++|||||.+|||+|+++.+||+|||
T Consensus 128 IvivMEYaS~GeLYDYiSer~------~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFG 198 (668)
T KOG0611|consen 128 IVIVMEYASGGELYDYISERG------SLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFG 198 (668)
T ss_pred EEEEEEecCCccHHHHHHHhc------cccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccc
Confidence 999999999999999999876 799999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCCCCC-CcccccccCCcCCCccccCCccHHHHHHHhCCCcccccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEA-SMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIV 766 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~ 766 (833)
++-.+.+..+ .+.++|+|-|.+||++.|.+| .+.+|-|| .|+.+|.++.|..|+.-.+.
T Consensus 199 LSNly~~~kf---------LqTFCGSPLYASPEIvNG~PY~GPEVDsWs----------LGvLLYtLVyGtMPFDG~Dh- 258 (668)
T KOG0611|consen 199 LSNLYADKKF---------LQTFCGSPLYASPEIVNGTPYKGPEVDSWS----------LGVLLYTLVYGTMPFDGRDH- 258 (668)
T ss_pred hhhhhccccH---------HHHhcCCcccCCccccCCCCCCCCccchhh----------HHHHHHHHhhcccccCCchH-
Confidence 9987765432 345789999999999999887 47789888 88899999999999763321
Q ss_pred cccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 040925 767 DPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKL 821 (833)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 821 (833)
..+..+.....+ . ... -+....-+|++|+..+|++|.|+++|....
T Consensus 259 -k~lvrQIs~GaY-r---EP~----~PSdA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 259 -KRLVRQISRGAY-R---EPE----TPSDASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred -HHHHHHhhcccc-c---CCC----CCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 112222211111 0 011 123345789999999999999999998764
No 42
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-40 Score=303.54 Aligned_cols=253 Identities=21% Similarity=0.276 Sum_probs=203.9
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeecc--CCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK--YKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
.+.|++.+.||+|.|+.||++.+..+|+.+|+|.+... .....+++.+|++|.+.++||||+++.+.+.+. .+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~-----~~ 84 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE-----SF 84 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhccc-----ce
Confidence 45788999999999999999999999999999998643 233567899999999999999999999885544 48
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecC---CCcEEEc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDH---DMVAHVC 684 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kL~ 684 (833)
.|+|+|+|+|++|..-|-.+. .+++..+-.+++||++||.|+|.. +|||||+||+|+++.. ...+||+
T Consensus 85 ~ylvFe~m~G~dl~~eIV~R~------~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~ 155 (355)
T KOG0033|consen 85 HYLVFDLVTGGELFEDIVARE------FYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLA 155 (355)
T ss_pred eEEEEecccchHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeec
Confidence 999999999999987665543 689999999999999999999999 9999999999999953 3479999
Q ss_pred ccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccc
Q 040925 685 DFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVME 764 (833)
Q Consensus 685 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~ 764 (833)
|||+|..+.+.. ...+.+|||+|||||++...+|+..+|||+ -|+++|-++.|..|+.-.+
T Consensus 156 ~FGvAi~l~~g~---------~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~----------cGViLfiLL~G~~PF~~~~ 216 (355)
T KOG0033|consen 156 DFGLAIEVNDGE---------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWA----------CGVILYILLVGYPPFWDED 216 (355)
T ss_pred ccceEEEeCCcc---------ccccccCCCcccCHHHhhcCCCCCcchhhh----------hhHHHHHHHhCCCCCCCcc
Confidence 999998776322 234578999999999999999999999999 7888999999999976322
Q ss_pred cccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 765 IVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
. .++....+......+. ...+.+.++..+++.+|+..||++|.|+.|.++.
T Consensus 217 ~--~rlye~I~~g~yd~~~---~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 217 Q--HRLYEQIKAGAYDYPS---PEWDTVTPEAKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred H--HHHHHHHhccccCCCC---cccCcCCHHHHHHHHHHhccChhhhccHHHHhCC
Confidence 1 1121222222221111 1223345677899999999999999999998764
No 43
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-37 Score=315.19 Aligned_cols=269 Identities=26% Similarity=0.340 Sum_probs=194.3
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhh--cCCCccceEeeEeecCCCCCCceE
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRN--IRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
......+.+|+|+||.||+|... ++.||||++.. ...+.+..|-+|++. ++|+||++++++-....- ....+
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~-~~~ey 283 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTA-DRMEY 283 (534)
T ss_pred CchhhHHHhhcCccceeehhhcc--CceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCc-cccce
Confidence 44566789999999999999994 68999999963 345678888887766 479999999987443321 24478
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcC------CCCceeeCCCCCCeeecCCCcEE
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHC------QPPMVHGDLKPSNVLLDHDMVAH 682 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~------~~~ivH~Dlkp~NIll~~~~~~k 682 (833)
++|+||.+.|+|.+|++.+ .++|....+++.-+++||+|||+.. .|+|+|||||.+|||+..|+++.
T Consensus 284 wLVt~fh~kGsL~dyL~~n-------tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTcc 356 (534)
T KOG3653|consen 284 WLVTEFHPKGSLCDYLKAN-------TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCC 356 (534)
T ss_pred eEEeeeccCCcHHHHHHhc-------cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEE
Confidence 9999999999999999986 6999999999999999999999764 57899999999999999999999
Q ss_pred EcccccccccCcccccccccCCCccccccccccccCccccCCCC------CCcccccccCCcCCCccccCCccHHHHHHH
Q 040925 683 VCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSE------ASMTGDIFTGRRPIDAVFNEGHSLHEFAKT 756 (833)
Q Consensus 683 L~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~ 756 (833)
|+|||+|..+..... .....+.+||.+|||||++.+.. .-.+.||||.|. ++||++.+
T Consensus 357 IaDFGLAl~~~p~~~------~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgL----------VLWEi~SR 420 (534)
T KOG3653|consen 357 IADFGLALRLEPGKP------QGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGL----------VLWEIASR 420 (534)
T ss_pred eeccceeEEecCCCC------CcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHH----------HHHHHHhh
Confidence 999999998764332 22334578999999999987643 224578888444 44454443
Q ss_pred hCCCc---ccc---------cccccc--hhh-hccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 040925 757 ALPEK---VME---------IVDPSL--LME-VMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKL 821 (833)
Q Consensus 757 ~~p~~---~~~---------~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 821 (833)
.--.. ..+ ..+|.+ +.+ ++.++....-...+.-......+.+.+..||.+||+.|.|+.=+.+++
T Consensus 421 C~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~ 500 (534)
T KOG3653|consen 421 CTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERM 500 (534)
T ss_pred cccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHH
Confidence 21110 000 001110 011 111110000001111123567789999999999999999999999998
Q ss_pred HHhhhhh
Q 040925 822 CHTRETF 828 (833)
Q Consensus 822 ~~i~~~~ 828 (833)
.++....
T Consensus 501 ~~l~~~~ 507 (534)
T KOG3653|consen 501 AELMMLW 507 (534)
T ss_pred HHHhccC
Confidence 8876544
No 44
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=7e-38 Score=344.66 Aligned_cols=268 Identities=21% Similarity=0.258 Sum_probs=213.3
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcC-CCccceEeeE-eecCCCCC-Cce
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIR-HRNLIKIITI-CSSTDFKG-TDF 607 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~-~~~~~~~~-~~~ 607 (833)
-++++.+.|.+|||+.||.|.+...+..||+|++-..++...+.+.+|+++|++|+ |||||.+++. .....-.+ .-+
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence 35778899999999999999999777999999997777777889999999999997 9999999993 22221122 346
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
+++.||||+||.|-|++..+... .+++.++++|++|+++|+++||.. +|+|||||||-|||||+.+|..||||||
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rlq~----~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFG 191 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRLQT----RLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFG 191 (738)
T ss_pred EEeehhhccCCcHHHHHHHHHhc----cCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccc
Confidence 88999999999999999876543 699999999999999999999998 7789999999999999999999999999
Q ss_pred cccccCcccc-cccccCCCccccccccccccCccc---cCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccc
Q 040925 688 LAKFLSDHQL-DTAVKTPSSSIGLKGTVGYVAPEY---GMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVM 763 (833)
Q Consensus 688 ~a~~~~~~~~-~~~~~~~~~~~~~~gt~~y~aPE~---~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~ 763 (833)
.|........ ......-........|+.|+|||+ ..+.+.++|+|||+ .|+.+|.+.....|++..
T Consensus 192 Satt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWA----------LGclLYkLCy~t~PFe~s 261 (738)
T KOG1989|consen 192 SATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWA----------LGCLLYKLCYFTTPFEES 261 (738)
T ss_pred ccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHH----------HHHHHHHHHHhCCCcCcC
Confidence 9874432211 000000001112357999999996 46778999999999 888899999888888632
Q ss_pred ---ccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhhh
Q 040925 764 ---EIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRET 827 (833)
Q Consensus 764 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~~ 827 (833)
.+++..+ .+ +..+.++..+.+||..||+.||++||++-||+..+.++...
T Consensus 262 g~laIlng~Y---------~~-----P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 262 GKLAILNGNY---------SF-----PPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred cceeEEeccc---------cC-----CCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 2222222 11 12245788899999999999999999999999999998754
No 45
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-39 Score=309.06 Aligned_cols=249 Identities=22% Similarity=0.304 Sum_probs=208.2
Q ss_pred CccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEE
Q 040925 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVF 612 (833)
Q Consensus 533 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 612 (833)
|.++.+||+|+||.||+|.++++|..||+|.+.. ..+.+++.+|+.+|+++++|+||++||.+.... ..|+||
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV--~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~s-----DLWIVM 107 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV--DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHS-----DLWIVM 107 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc--cchHHHHHHHHHHHHHcCCchhhhhhhhhccCC-----ceEeeh
Confidence 6778899999999999999999999999999864 345678999999999999999999999864443 789999
Q ss_pred EecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccccc
Q 040925 613 EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL 692 (833)
Q Consensus 613 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 692 (833)
|||..|++.+++..+.. ++++.++..+++..++||+|||.. .-||||||..|||++.+|.+||+|||.|..+
T Consensus 108 EYCGAGSiSDI~R~R~K-----~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQL 179 (502)
T KOG0574|consen 108 EYCGAGSISDIMRARRK-----PLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQL 179 (502)
T ss_pred hhcCCCcHHHHHHHhcC-----CccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchh
Confidence 99999999999987653 799999999999999999999999 8999999999999999999999999999876
Q ss_pred CcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchh
Q 040925 693 SDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLM 772 (833)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~ 772 (833)
.+.. .+...+.|||.|||||++..-.|+.++|||| .|.+..|++.|..|+........-++.
T Consensus 180 TDTM--------AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWS----------LGITaIEMAEG~PPYsDIHPMRAIFMI 241 (502)
T KOG0574|consen 180 TDTM--------AKRNTVIGTPFWMAPEVIEEIGYDTKADIWS----------LGITAIEMAEGRPPYSDIHPMRAIFMI 241 (502)
T ss_pred hhhH--------HhhCccccCcccccHHHHHHhccchhhhHhh----------hcchhhhhhcCCCCcccccccceeEec
Confidence 6533 2334578999999999999999999999999 788888999999887632222111110
Q ss_pred hhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 773 EVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
. ..++.--..++..+..+.+++..|+.+.|++|-|+-++++.
T Consensus 242 ---P---T~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 242 ---P---TKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred ---c---CCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 0 01111223456778889999999999999999999998875
No 46
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-37 Score=328.54 Aligned_cols=259 Identities=22% Similarity=0.355 Sum_probs=201.3
Q ss_pred CCccCceeccCcceEEEEEEECCCc----eEEEEEEeecc---CCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCC
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDE----MIVAVKVINLK---YKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKG 604 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~----~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 604 (833)
+-...++||+|+||.||+|+.+..+ ..||||..+.. ......++.+|+++|++++|||||++||++....
T Consensus 158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~--- 234 (474)
T KOG0194|consen 158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEE--- 234 (474)
T ss_pred CccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC---
Confidence 3445589999999999999986432 23899998752 2445678999999999999999999999987665
Q ss_pred CceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEc
Q 040925 605 TDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVC 684 (833)
Q Consensus 605 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 684 (833)
-+++|||+|+||+|.++++..+. .++..+...++.++|.||+|||++ ++|||||-.+|+|++.++.+||+
T Consensus 235 --Pl~ivmEl~~gGsL~~~L~k~~~-----~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKIS 304 (474)
T KOG0194|consen 235 --PLMLVMELCNGGSLDDYLKKNKK-----SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKIS 304 (474)
T ss_pred --ccEEEEEecCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeC
Confidence 78999999999999999998763 489999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccc
Q 040925 685 DFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVME 764 (833)
Q Consensus 685 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~ 764 (833)
|||+++.-......... ..-...|+|||.+....|++++||||+|+..|++|..|...|.-....
T Consensus 305 DFGLs~~~~~~~~~~~~--------~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~------- 369 (474)
T KOG0194|consen 305 DFGLSRAGSQYVMKKFL--------KKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY------- 369 (474)
T ss_pred ccccccCCcceeecccc--------ccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH-------
Confidence 99998754321111100 124578999999999999999999999999888888665322111000
Q ss_pred cccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhhh
Q 040925 765 IVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRET 827 (833)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~~ 827 (833)
.....+..... ....+...+..+..++.+||..||++||||.++.+.++.+...
T Consensus 370 ----~v~~kI~~~~~-----r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~ 423 (474)
T KOG0194|consen 370 ----EVKAKIVKNGY-----RMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKK 423 (474)
T ss_pred ----HHHHHHHhcCc-----cCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhc
Confidence 11111101111 0111223466788889999999999999999999999988754
No 47
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-37 Score=329.88 Aligned_cols=243 Identities=23% Similarity=0.273 Sum_probs=201.5
Q ss_pred HHHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeecc---CCcchhHHHHHHHHHhhcC-CCccceEeeEeecCCC
Q 040925 527 SKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK---YKGASRSFVAECEALRNIR-HRNLIKIITICSSTDF 602 (833)
Q Consensus 527 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~ 602 (833)
....++|...++||+|+||+|++|..+.+++.||||++++. ..++.+....|.+|+.... ||.++.+++.+
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~f----- 438 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCF----- 438 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccc-----
Confidence 34456899999999999999999999999999999999865 3455677888999988885 99999999985
Q ss_pred CCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEE
Q 040925 603 KGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH 682 (833)
Q Consensus 603 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 682 (833)
++..+.|+||||+.||++..+++.. .+++.+++.|+..|+.||.|||++ ||||||||.+|||+|.+|.+|
T Consensus 439 QT~~~l~fvmey~~Ggdm~~~~~~~-------~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~k 508 (694)
T KOG0694|consen 439 QTKEHLFFVMEYVAGGDLMHHIHTD-------VFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVK 508 (694)
T ss_pred ccCCeEEEEEEecCCCcEEEEEecc-------cccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEE
Confidence 4455999999999999955544433 699999999999999999999999 999999999999999999999
Q ss_pred EcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCc-
Q 040925 683 VCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEK- 761 (833)
Q Consensus 683 L~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~- 761 (833)
|+|||+++.-- .....+.+++|||.|||||++.+..|+.++|+|+ +|+.+|+|+.|..|+.
T Consensus 509 iADFGlcKe~m--------~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~----------lGVLlyeML~Gq~PF~g 570 (694)
T KOG0694|consen 509 IADFGLCKEGM--------GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWG----------LGVLLYEMLVGESPFPG 570 (694)
T ss_pred ecccccccccC--------CCCCccccccCChhhcChhhhccCcccchhhHHH----------HHHHHHHHHcCCCCCCC
Confidence 99999998532 1233455689999999999999999999999999 8999999999999976
Q ss_pred --ccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCH
Q 040925 762 --VMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDM 814 (833)
Q Consensus 762 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 814 (833)
..+..|.-...+. ..+..++.+...++.+++.++|++|-.+
T Consensus 571 ddEee~FdsI~~d~~------------~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 571 DDEEEVFDSIVNDEV------------RYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred CCHHHHHHHHhcCCC------------CCCCcccHHHHHHHHHHhccCcccccCC
Confidence 2222222221111 1233356778899999999999999855
No 48
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-36 Score=319.57 Aligned_cols=251 Identities=19% Similarity=0.258 Sum_probs=200.2
Q ss_pred ceeccCcceEEEEEEECCCceEEEEEEeeccCCcc---hhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEEE
Q 040925 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGA---SRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFE 613 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 613 (833)
..||+|++|.||+|.+ +|+.||||+++...... .+.+.+|++++++++||||++++|++.+.. ++....++|||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~-~~~~~~~lv~E 102 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIV-DDLPRLSLILE 102 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecc-cCCCceEEEEE
Confidence 6799999999999998 68899999997543322 467789999999999999999999986521 22346899999
Q ss_pred ecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccC
Q 040925 614 YMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLS 693 (833)
Q Consensus 614 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 693 (833)
|+++|+|.+++...+ .+++..+..++.|++.|+.|||+.. +++||||||+||++++++.+||+|||+++...
T Consensus 103 y~~~g~L~~~l~~~~------~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~ 174 (283)
T PHA02988 103 YCTRGYLREVLDKEK------DLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILS 174 (283)
T ss_pred eCCCCcHHHHHhhCC------CCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhc
Confidence 999999999998654 6889999999999999999999742 78899999999999999999999999998654
Q ss_pred cccccccccCCCccccccccccccCccccCC--CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccch
Q 040925 694 DHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG--SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLL 771 (833)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~ 771 (833)
.... ...||+.|+|||++.+ ..++.++|||| +|+++|+++++..|+..... ....
T Consensus 175 ~~~~-----------~~~~~~~y~aPE~~~~~~~~~~~k~Di~S----------lGvil~el~~g~~Pf~~~~~--~~~~ 231 (283)
T PHA02988 175 SPPF-----------KNVNFMVYFSYKMLNDIFSEYTIKDDIYS----------LGVVLWEIFTGKIPFENLTT--KEIY 231 (283)
T ss_pred cccc-----------cccCcccccCHHHhhhccccccchhhhhH----------HHHHHHHHHHCCCCCCCCCH--HHHH
Confidence 3211 2358999999999876 67999999999 88899999999988763221 1111
Q ss_pred hhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhh
Q 040925 772 MEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRE 826 (833)
Q Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~ 826 (833)
........ ....+..+++.+.+++.+||+.||++|||++|+++.|+..+.
T Consensus 232 ~~i~~~~~-----~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 232 DLIINKNN-----SLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred HHHHhcCC-----CCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 11111111 011122457789999999999999999999999999998764
No 49
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=6.6e-37 Score=328.09 Aligned_cols=243 Identities=23% Similarity=0.258 Sum_probs=194.0
Q ss_pred ceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEEE
Q 040925 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFE 613 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 613 (833)
+.||+|+||.||+|++..+++.||+|+++... ......+.+|++++++++||||+++++++...+ ..|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~-----~~~lv~e 75 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHD-----RLCFVME 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCC-----EEEEEEe
Confidence 47999999999999999999999999997432 223456788999999999999999999876554 8999999
Q ss_pred ecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccC
Q 040925 614 YMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLS 693 (833)
Q Consensus 614 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 693 (833)
|+++|+|.+++.... .+++.++..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||+++...
T Consensus 76 ~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~ 146 (323)
T cd05571 76 YANGGELFFHLSRER------VFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 146 (323)
T ss_pred CCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccc
Confidence 999999999997654 689999999999999999999999 99999999999999999999999999987532
Q ss_pred cccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchhh
Q 040925 694 DHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLME 773 (833)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~~ 773 (833)
... .......||+.|+|||++.+..++.++|||| .|+++++++++..|+...+.. .....
T Consensus 147 ~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS----------lG~il~elltg~~Pf~~~~~~--~~~~~ 206 (323)
T cd05571 147 SDG--------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWG----------LGVVMYEMMCGRLPFYNQDHE--KLFEL 206 (323)
T ss_pred cCC--------CcccceecCccccChhhhcCCCCCccccCcc----------cchhhhhhhcCCCCCCCCCHH--HHHHH
Confidence 211 1122356999999999999999999999999 778888888888886422110 00000
Q ss_pred hccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCC-----CHHHHHHH
Q 040925 774 VMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERM-----DMRDVVAK 820 (833)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~ 820 (833)
..... ...+...+..+.+++.+||+.||++|| ++.++++.
T Consensus 207 ~~~~~-------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 207 ILMEE-------IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred HHcCC-------CCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 11110 011223456788999999999999999 79988764
No 50
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-37 Score=312.02 Aligned_cols=271 Identities=25% Similarity=0.348 Sum_probs=206.2
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhc--CCCccceEeeEeecCCCCCCce
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNI--RHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~~~~~~~~~ 607 (833)
..+....+.||+|.||+||+|.++ |+.||||+|. ..+.+.+.+|.+|++.. +|+||+.+++.-..+. ..-..
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~---srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~-gs~TQ 283 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFS---SRDERSWFRETEIYQTVMLRHENILGFIAADNKDN-GSWTQ 283 (513)
T ss_pred hheeEEEEEecCccccceeecccc--CCceEEEEec---ccchhhhhhHHHHHHHHHhccchhhhhhhccccCC-CceEE
Confidence 346778899999999999999996 7889999995 34567889999999885 9999999988643332 22346
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcC-----CCCceeeCCCCCCeeecCCCcEE
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHC-----QPPMVHGDLKPSNVLLDHDMVAH 682 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~-----~~~ivH~Dlkp~NIll~~~~~~k 682 (833)
.|+|++|.+.|||+||+... .++....++++..+|.||++||... .|.|+|||||+.|||+.+++++.
T Consensus 284 LwLvTdYHe~GSL~DyL~r~-------tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~ 356 (513)
T KOG2052|consen 284 LWLVTDYHEHGSLYDYLNRN-------TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC 356 (513)
T ss_pred EEEeeecccCCcHHHHHhhc-------cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEE
Confidence 89999999999999999975 6899999999999999999999653 68999999999999999999999
Q ss_pred EcccccccccCcccccccccCCCccccccccccccCccccCCCC------CCcccccccCCcCCCccccCCccHHHHHHH
Q 040925 683 VCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSE------ASMTGDIFTGRRPIDAVFNEGHSLHEFAKT 756 (833)
Q Consensus 683 L~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~ 756 (833)
|+|+|+|.........- .......+||.+|||||++.... .-..+|||| +|.++||++.+
T Consensus 357 IADLGLAv~h~~~t~~i----di~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYa----------fgLVlWEiarR 422 (513)
T KOG2052|consen 357 IADLGLAVRHDSDTDTI----DIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYA----------FGLVLWEIARR 422 (513)
T ss_pred EeeceeeEEecccCCcc----cCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHH----------HHHHHHHHHHH
Confidence 99999998765543211 12233468999999999875432 124578888 55555555554
Q ss_pred hC----------CCcccccccccc---hhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 040925 757 AL----------PEKVMEIVDPSL---LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCH 823 (833)
Q Consensus 757 ~~----------p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 823 (833)
.. |+...-..||.+ ..-+...........++...++...+.++|..||..+|+.|-|+-.|-+.+.+
T Consensus 423 c~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~ 502 (513)
T KOG2052|consen 423 CESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAK 502 (513)
T ss_pred hhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHH
Confidence 32 222111122222 11112222333445567778899999999999999999999999999999999
Q ss_pred hhhh
Q 040925 824 TRET 827 (833)
Q Consensus 824 i~~~ 827 (833)
+.+.
T Consensus 503 l~~~ 506 (513)
T KOG2052|consen 503 LSNS 506 (513)
T ss_pred HhcC
Confidence 8854
No 51
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=7.6e-37 Score=329.45 Aligned_cols=254 Identities=20% Similarity=0.233 Sum_probs=201.0
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+++++.++||||+++++++...+ .
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~-----~ 75 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDE-----Y 75 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCC-----E
Confidence 47999999999999999999999899999999997432 223456889999999999999999999976554 8
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.|+||||+++|+|.+++.... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg 146 (333)
T cd05600 76 LYLAMEYVPGGDFRTLLNNLG------VLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFG 146 (333)
T ss_pred EEEEEeCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCc
Confidence 999999999999999997654 688999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD 767 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~ 767 (833)
++..... ......||+.|+|||++.+..++.++|||| .|+++++++++..|+......+
T Consensus 147 ~a~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws----------lG~il~ell~g~~pf~~~~~~~ 205 (333)
T cd05600 147 LSKGIVT-----------YANSVVGSPDYMAPEVLRGKGYDFTVDYWS----------LGCMLYEFLCGFPPFSGSTPNE 205 (333)
T ss_pred CCccccc-----------ccCCcccCccccChhHhcCCCCCCccceec----------chHHHhhhhhCCCCCCCCCHHH
Confidence 9975533 112346999999999999999999999999 7888888888888875322111
Q ss_pred ccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 768 PSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
............ ..+........++..+.+++.+||..+|++||+++|+++.
T Consensus 206 ~~~~i~~~~~~~-~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 206 TWENLKYWKETL-QRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred HHHHHHhccccc-cCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 000000000000 0000000011345678899999999999999999999875
No 52
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=1.2e-39 Score=338.84 Aligned_cols=366 Identities=25% Similarity=0.403 Sum_probs=268.6
Q ss_pred cEEEcCCCcCc-ccCCccccCCCCCCEEEccCCcccccCCccCCCCCCCCEEEcCCCcccccCCccccCCCCCcEEECCC
Q 040925 2 QTLAVNDNYLT-GQLPDFVGNLSDLEVIRIMGNSLGGKIPTTLGLLRNLVSLNVAENKFSGMFPRSICNISSLELIQLAL 80 (833)
Q Consensus 2 ~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 80 (833)
+-.|+++|..+ +-+|.....++.++-|.|...++ ..+|+.++.+.+|+.|.+++|++. .+-+.+..|+.|+.+++..
T Consensus 10 rGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L-~~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~ 87 (1255)
T KOG0444|consen 10 RGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKL-EQVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVRD 87 (1255)
T ss_pred ecccccCCcCCCCcCchhHHHhhheeEEEechhhh-hhChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhhc
Confidence 34678888887 57788888888888888888888 678888888888888888888887 5566788888888888888
Q ss_pred cccc-cccCchhhcCCCCccEEEccCCcceeeCCccccCCCCCcEEEcccCccccccCcCccCCCcCceEecccccCCCC
Q 040925 81 NRFS-GNLPFDIVVNLPNLKALAIGGNNFFGSIPYSLSNASNLELLDLSVNQFKGNVSIDFSSLKNLLWLNLEQNNLGTG 159 (833)
Q Consensus 81 N~l~-~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~ 159 (833)
|++. +.||.++| .+..|++|+||+|+++ ..|..+..-+++-+|+||+|+|..|+...|-+|+.|-.|+||+|++..+
T Consensus 88 N~LKnsGiP~diF-~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe~L 165 (1255)
T KOG0444|consen 88 NNLKNSGIPTDIF-RLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLEML 165 (1255)
T ss_pred cccccCCCCchhc-ccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhhhc
Confidence 8875 34788887 6888888888888887 6788888888888888888888888888888888888888888888765
Q ss_pred CCCCcccccccCCCCCCCEEEccCCcCcccCChhHhhhcccccEEEccCccccccCChhhhcCCCCCeEeccCCccc-cc
Q 040925 160 TATDLDFVTFLTNCSSLKALSLADNQFGGELPHSIANLSSTVINFGIGRNQISGTIPPGIRNLVNLIGFGAEENQLH-GT 238 (833)
Q Consensus 160 ~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~-~~ 238 (833)
|+ .+..|..|++|+|++|.+. .+++ ..+-.+++|+.|.+++.+=+ .-
T Consensus 166 PP-------Q~RRL~~LqtL~Ls~NPL~------hfQL-------------------rQLPsmtsL~vLhms~TqRTl~N 213 (1255)
T KOG0444|consen 166 PP-------QIRRLSMLQTLKLSNNPLN------HFQL-------------------RQLPSMTSLSVLHMSNTQRTLDN 213 (1255)
T ss_pred CH-------HHHHHhhhhhhhcCCChhh------HHHH-------------------hcCccchhhhhhhcccccchhhc
Confidence 54 3667778888888888764 1111 12334556667777765532 34
Q ss_pred CCccccCCCCCCEEEcccccCcccCCccccCCCCCCeEEeecccccCCCCCCCCCCCccceeecCCceecccCCcccccc
Q 040925 239 IPDAIGELKNLQKLCLFRNFLQGRIPSGLGNLTKLANLELSSNSLQGNIPSSLGNCQNLMSFTASQNKLTGALPHQLLSI 318 (833)
Q Consensus 239 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~ 318 (833)
+|.++.++.+|..+|||.|.+. +.|+.+.++.+|+.|+||+|+|+ .+........+|++|+||.|+++ .+|..++.+
T Consensus 214 ~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL 290 (1255)
T KOG0444|consen 214 IPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKL 290 (1255)
T ss_pred CCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhh
Confidence 6777777777777788777777 67777777777777777777777 44444555667777777777777 677777777
Q ss_pred cccceeeecCCCccCC-CCCcccccCCCcCEEeccCCcCCCCCCccccCCCCCcEEeecCCccccccCccccCCCCCCeE
Q 040925 319 TTLSLYLDLSNNLLNG-SLPLQVGHLKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKEL 397 (833)
Q Consensus 319 ~~ll~~L~ls~N~l~~-~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 397 (833)
+.+ +.|++.+|+++- -+|..++.|.+|+++..++|.+. ..|..++.|..|+.|.|++|++- ..|+++.-++.|+.|
T Consensus 291 ~kL-~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vL 367 (1255)
T KOG0444|consen 291 TKL-TKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVL 367 (1255)
T ss_pred HHH-HHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCccee
Confidence 666 456666666652 25677777777777777777776 67777777777777777777776 566677777777777
Q ss_pred EccCcccCCCch
Q 040925 398 NVSSNNLSGQIP 409 (833)
Q Consensus 398 ~l~~N~l~~~~p 409 (833)
|+.+|.-.-.+|
T Consensus 368 DlreNpnLVMPP 379 (1255)
T KOG0444|consen 368 DLRENPNLVMPP 379 (1255)
T ss_pred eccCCcCccCCC
Confidence 777776543343
No 53
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=9.1e-37 Score=328.18 Aligned_cols=258 Identities=22% Similarity=0.340 Sum_probs=201.3
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceE
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
.++|++.+.||+|+||.||+|++..++..||+|.++.... ...+.+.+|++++++++||||+++++++...+ ..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~ 78 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-----EI 78 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC-----EE
Confidence 3689999999999999999999999999999999975432 23467899999999999999999999976554 89
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
++||||+++|+|.+++.... .+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 150 (331)
T cd06649 79 SICMEHMDGGSLDQVLKEAK------RIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGV 150 (331)
T ss_pred EEEeecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcc
Confidence 99999999999999997654 6889999999999999999999862 699999999999999999999999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccc--
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIV-- 766 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~-- 766 (833)
+....... .....||+.|+|||++.+..++.++|||| +|+++++++++..|+...+..
T Consensus 151 ~~~~~~~~----------~~~~~g~~~y~aPE~~~~~~~~~~~Diws----------lG~il~el~tg~~p~~~~~~~~~ 210 (331)
T cd06649 151 SGQLIDSM----------ANSFVGTRSYMSPERLQGTHYSVQSDIWS----------MGLSLVELAIGRYPIPPPDAKEL 210 (331)
T ss_pred cccccccc----------cccCCCCcCcCCHhHhcCCCCCchHhHHH----------HHHHHHHHHhCCCCCCCCCHHHH
Confidence 87653321 12246999999999999999999999999 778888888888876421110
Q ss_pred ----cccch-------hhhcc----------------cc----------chhhhhhhhchHHHHHHHHHHhhccCCCCCC
Q 040925 767 ----DPSLL-------MEVMT----------------NN----------SMIQEDKRVKTEECLNAIIRTGVLCSMESPF 809 (833)
Q Consensus 767 ----~~~~~-------~~~~~----------------~~----------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 809 (833)
..... ..... .. .............++..+.+++.+||+.||+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~ 290 (331)
T cd06649 211 EAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPA 290 (331)
T ss_pred HHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcc
Confidence 00000 00000 00 0000000000112456789999999999999
Q ss_pred CCCCHHHHHHH
Q 040925 810 ERMDMRDVVAK 820 (833)
Q Consensus 810 ~RPt~~eil~~ 820 (833)
+|||++|+++.
T Consensus 291 ~Rpt~~ell~h 301 (331)
T cd06649 291 ERADLKMLMNH 301 (331)
T ss_pred cCCCHHHHhcC
Confidence 99999999876
No 54
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=7.3e-37 Score=325.48 Aligned_cols=268 Identities=22% Similarity=0.327 Sum_probs=196.8
Q ss_pred hcCCccCceeccCcceEEEEEEECC----------------CceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccce
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGE----------------DEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIK 592 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~----------------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~ 592 (833)
.++|++.+.||+|+||.||+|.+.. ++..||+|.++.... .....+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 3579999999999999999998632 345799999875432 23457899999999999999999
Q ss_pred EeeEeecCCCCCCceEeEEEEecCCCChhhhhccCCCc-------------cccccCCHHHHHHHHHHHHHHHHHHhhcC
Q 040925 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQ-------------VEVCKLSLIQRVNIAIDVASAMEYLHHHC 659 (833)
Q Consensus 593 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-------------~~~~~l~~~~~~~i~~qi~~gL~~LH~~~ 659 (833)
+++++...+ ..++||||+++|+|.+++...... .....+++..+++++.|++.||+|||+.
T Consensus 84 ~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~- 157 (304)
T cd05096 84 LLGVCVDED-----PLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL- 157 (304)
T ss_pred EEEEEecCC-----ceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC-
Confidence 999976554 789999999999999998653211 0112478889999999999999999999
Q ss_pred CCCceeeCCCCCCeeecCCCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcC
Q 040925 660 QPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRP 739 (833)
Q Consensus 660 ~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~ 739 (833)
+|+||||||+||+++.++.+||+|||+++......... ......++..|||||++.+..++.++||||
T Consensus 158 --~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s---- 225 (304)
T cd05096 158 --NFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYR------IQGRAVLPIRWMAWECILMGKFTTASDVWA---- 225 (304)
T ss_pred --CccccCcchhheEEcCCccEEECCCccceecccCceeE------ecCcCCCCccccCHHHHhcCCCCchhhhHH----
Confidence 99999999999999999999999999998654322111 111234688999999998888999999999
Q ss_pred CCccccCCccHHHHHHH--hCCCcccccccccchhhhccccc-hhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHH
Q 040925 740 IDAVFNEGHSLHEFAKT--ALPEKVMEIVDPSLLMEVMTNNS-MIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRD 816 (833)
Q Consensus 740 ~~~~~~~g~~l~~~~~~--~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~e 816 (833)
+|+++++++++ ..|+.... +............ .........+..++..+.+++.+||..||++|||++|
T Consensus 226 ------lG~~l~el~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~ 297 (304)
T cd05096 226 ------FGVTLWEILMLCKEQPYGELT--DEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSD 297 (304)
T ss_pred ------HHHHHHHHHHccCCCCCCcCC--HHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHH
Confidence 77777777653 33332111 1111100000000 0000000112235678899999999999999999999
Q ss_pred HHHHHHH
Q 040925 817 VVAKLCH 823 (833)
Q Consensus 817 il~~L~~ 823 (833)
|.+.|++
T Consensus 298 i~~~l~~ 304 (304)
T cd05096 298 IHAFLTE 304 (304)
T ss_pred HHHHHhC
Confidence 9988763
No 55
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.4e-37 Score=307.97 Aligned_cols=276 Identities=22% Similarity=0.311 Sum_probs=202.0
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC--cchhHHHHHHHHHhhcCCCc-cceEeeEeecCC-CCCC
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNIRHRN-LIKIITICSSTD-FKGT 605 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~-~~~~ 605 (833)
...|..+++||+|+||+||+|+.+.+|+.||+|+++...+ +......+|+.++++++|+| |+.+++++.... +...
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 4467788899999999999999999999999999986644 35677899999999999999 999999987654 2334
Q ss_pred ceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcc
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 685 (833)
...++||||++. +|.+++....... ..++...++.+++|++.||+|||++ +|+||||||+||+++++|.+||+|
T Consensus 90 ~~l~lvfe~~d~-DL~~ymd~~~~~~--~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaD 163 (323)
T KOG0594|consen 90 GKLYLVFEFLDR-DLKKYMDSLPKKP--QGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLAD 163 (323)
T ss_pred ceEEEEEEeecc-cHHHHHHhccccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeec
Confidence 478899999975 9999999866321 2577789999999999999999999 999999999999999999999999
Q ss_pred cccccccCcccccccccCCCccccccccccccCccccCCC-CCCcccccccCCcCCCccccC-----CccHHHHHHH---
Q 040925 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS-EASMTGDIFTGRRPIDAVFNE-----GHSLHEFAKT--- 756 (833)
Q Consensus 686 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Di~s~~~~~~~~~~~-----g~~l~~~~~~--- 756 (833)
||+|+...-+.. ..+..++|.+|+|||++.+. .|++..||||.||.|.+|+.. |..-.+....
T Consensus 164 FGlAra~~ip~~--------~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~ 235 (323)
T KOG0594|consen 164 FGLARAFSIPMR--------TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFR 235 (323)
T ss_pred cchHHHhcCCcc--------cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 999996553321 12345799999999999887 699999999988887776542 2111111111
Q ss_pred --hCC-Ccccccc--cccchhhhccccchhhhhhhhchHH---HHHHHHHHhhccCCCCCCCCCCHHHHHHH--HHHh
Q 040925 757 --ALP-EKVMEIV--DPSLLMEVMTNNSMIQEDKRVKTEE---CLNAIIRTGVLCSMESPFERMDMRDVVAK--LCHT 824 (833)
Q Consensus 757 --~~p-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~li~~cl~~dP~~RPt~~eil~~--L~~i 824 (833)
..| ...++.+ -+.+...+ ... ...+..... ......+++.+|++.+|++|.|++.++++ +..+
T Consensus 236 ~lGtP~e~~Wp~v~~~~~~k~~f--~~~---~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 236 LLGTPNEKDWPGVSSLPDYKAPF--PKW---PGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred HcCCCCccCCCCccccccccccC--cCC---CCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 011 1111100 01110000 000 001111111 11367899999999999999999999886 4444
No 56
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=8.6e-37 Score=321.44 Aligned_cols=252 Identities=21% Similarity=0.282 Sum_probs=199.4
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceE
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
.|+..+.||+|+||.||+|.+..+++.||+|.+.... ......+.+|++++++++|++|+++++++...+ ..
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~-----~~ 75 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKD-----AL 75 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCC-----eE
Confidence 3778899999999999999999899999999986432 122345788999999999999999999875544 89
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
++||||+++|+|.+++...... .+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 76 ~lv~e~~~~g~L~~~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~ 148 (285)
T cd05631 76 CLVLTIMNGGDLKFHIYNMGNP----GFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGL 148 (285)
T ss_pred EEEEEecCCCcHHHHHHhhCCC----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCC
Confidence 9999999999999888654321 589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc-
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD- 767 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~- 767 (833)
+........ .....||+.|+|||++.+..++.++|||| .|+++++++++..|+.......
T Consensus 149 ~~~~~~~~~---------~~~~~g~~~y~aPE~~~~~~~~~~~Dvws----------lGvil~el~~g~~pf~~~~~~~~ 209 (285)
T cd05631 149 AVQIPEGET---------VRGRVGTVGYMAPEVINNEKYTFSPDWWG----------LGCLIYEMIQGQSPFRKRKERVK 209 (285)
T ss_pred cEEcCCCCe---------ecCCCCCCCccCHhhhcCCCCCcccCchh----------HHHHHHHHHhCCCCCCCCCcchh
Confidence 976533211 12346999999999999999999999999 8889999999999876322110
Q ss_pred ccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCC-----HHHHHHH
Q 040925 768 PSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMD-----MRDVVAK 820 (833)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~eil~~ 820 (833)
......... ......+..++..+.+++.+||+.||++||+ ++++++.
T Consensus 210 ~~~~~~~~~------~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 210 REEVDRRVK------EDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred HHHHHHHhh------cccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 000000000 0011122335667889999999999999997 7888764
No 57
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.6e-38 Score=294.36 Aligned_cols=254 Identities=24% Similarity=0.308 Sum_probs=207.0
Q ss_pred HHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCc--------chhHHHHHHHHHhhc-CCCccceEeeEee
Q 040925 528 KATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG--------ASRSFVAECEALRNI-RHRNLIKIITICS 598 (833)
Q Consensus 528 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l-~h~niv~~~~~~~ 598 (833)
...+.|...+.+|.|..+.|-++.++.+|..+|+|++...... ..+...+|+.|++++ .||+|+++.+++.
T Consensus 14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye 93 (411)
T KOG0599|consen 14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE 93 (411)
T ss_pred hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence 4456788899999999999999999999999999999643221 124567899999998 5999999999976
Q ss_pred cCCCCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCC
Q 040925 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHD 678 (833)
Q Consensus 599 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~ 678 (833)
++. +.++|+|.|+.|.|.|++...- .+++.+.++|++|+.+|++|||.. .||||||||+|||++++
T Consensus 94 s~s-----F~FlVFdl~prGELFDyLts~V------tlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn 159 (411)
T KOG0599|consen 94 SDA-----FVFLVFDLMPRGELFDYLTSKV------TLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDN 159 (411)
T ss_pred Ccc-----hhhhhhhhcccchHHHHhhhhe------eecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccc
Confidence 655 8999999999999999998754 799999999999999999999999 99999999999999999
Q ss_pred CcEEEcccccccccCcccccccccCCCccccccccccccCccccC------CCCCCcccccccCCcCCCccccCCccHHH
Q 040925 679 MVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGM------GSEASMTGDIFTGRRPIDAVFNEGHSLHE 752 (833)
Q Consensus 679 ~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Di~s~~~~~~~~~~~g~~l~~ 752 (833)
.++||+|||+|+.+.... +....+|||+|.|||.+. ...|+..+|+|+ .|+++|.
T Consensus 160 ~~i~isDFGFa~~l~~Ge---------kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa----------~GVImyT 220 (411)
T KOG0599|consen 160 MNIKISDFGFACQLEPGE---------KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWA----------CGVIMYT 220 (411)
T ss_pred cceEEeccceeeccCCch---------hHHHhcCCCcccChhheeeecccCCCCccchhhHHH----------HHHHHHH
Confidence 999999999999776533 233568999999999754 345888899998 7888888
Q ss_pred HHHHhCCCccc-ccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 753 FAKTALPEKVM-EIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 753 ~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
++.|..|++-. +.+--++ .+..... ...+..++......++|.+|++.||.+|.|++|.++.
T Consensus 221 LLaGcpPFwHRkQmlMLR~---ImeGkyq---F~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 221 LLAGCPPFWHRKQMLMLRM---IMEGKYQ---FRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred HHcCCCchhHHHHHHHHHH---HHhcccc---cCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 88898887622 2221111 1222221 1223446678889999999999999999999999876
No 58
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-38 Score=323.27 Aligned_cols=245 Identities=26% Similarity=0.357 Sum_probs=200.6
Q ss_pred CccCceeccCcceEEEEEEECCCceEEEEEEeeccCCc---chhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 533 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
|.-.+.||.|+||.||-|++..+.+.||||++.-..+. ...++.+|++.|++++|||+|.+.|+|.-.. ..|
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~-----TaW 102 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREH-----TAW 102 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccc-----hHH
Confidence 55668999999999999999999999999999644332 3468999999999999999999999865443 789
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+|||||- |+-.|++.-.+. ++.+.++..|+.+.+.||+|||+. +.||||||..|||+++.|.|||+|||.|
T Consensus 103 LVMEYCl-GSAsDlleVhkK-----plqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSA 173 (948)
T KOG0577|consen 103 LVMEYCL-GSASDLLEVHKK-----PLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSA 173 (948)
T ss_pred HHHHHHh-ccHHHHHHHHhc-----cchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccch
Confidence 9999996 588888876653 688999999999999999999999 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccC---CCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGM---GSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIV 766 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~ 766 (833)
..+.+.. +++|||+|||||++. .+.|+-++|||| .|++..+++....|..-+...
T Consensus 174 si~~PAn------------sFvGTPywMAPEVILAMDEGqYdgkvDvWS----------LGITCIELAERkPPlFnMNAM 231 (948)
T KOG0577|consen 174 SIMAPAN------------SFVGTPYWMAPEVILAMDEGQYDGKVDVWS----------LGITCIELAERKPPLFNMNAM 231 (948)
T ss_pred hhcCchh------------cccCCccccchhHheeccccccCCccceee----------ccchhhhhhhcCCCccCchHH
Confidence 8765432 478999999999865 467999999999 888888888888775533322
Q ss_pred cccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 767 DPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.. ...+..+ ..+.....+.+..+..++..|+.+-|.+|||.+++++.
T Consensus 232 SA--LYHIAQN-----esPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 232 SA--LYHIAQN-----ESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred HH--HHHHHhc-----CCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 11 1122222 12233355677889999999999999999999998875
No 59
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=3.4e-37 Score=325.39 Aligned_cols=246 Identities=23% Similarity=0.263 Sum_probs=199.3
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
++|++.+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|++++++++||||+++++++.+. ..
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-----~~ 75 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQ-----RF 75 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccC-----Ce
Confidence 47899999999999999999999899999999996432 12345688999999999999999999885443 48
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.++||||+++|+|.+++...+ .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg 146 (291)
T cd05612 76 LYMLMEYVPGGELFSYLRNSG------RFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFG 146 (291)
T ss_pred EEEEEeCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecC
Confidence 999999999999999997654 688999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD 767 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~ 767 (833)
+++...... ....||+.|+|||++.+..++.++|||| +|+++++++++..|+.....
T Consensus 147 ~~~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~DiwS----------lG~il~~l~~g~~pf~~~~~-- 203 (291)
T cd05612 147 FAKKLRDRT-----------WTLCGTPEYLAPEVIQSKGHNKAVDWWA----------LGILIYEMLVGYPPFFDDNP-- 203 (291)
T ss_pred cchhccCCc-----------ccccCChhhcCHHHHcCCCCCchhhHHH----------HHHHHHHHHhCCCCCCCCCH--
Confidence 998653311 1246999999999999989999999999 88889999999888753211
Q ss_pred ccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCC-----HHHHHHH
Q 040925 768 PSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMD-----MRDVVAK 820 (833)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~eil~~ 820 (833)
............ ..+......+.+++.+||+.||.+||+ ++|+++.
T Consensus 204 ~~~~~~i~~~~~-------~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 204 FGIYEKILAGKL-------EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred HHHHHHHHhCCc-------CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 111111111111 111223557889999999999999995 8888765
No 60
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=6.3e-37 Score=328.93 Aligned_cols=247 Identities=22% Similarity=0.252 Sum_probs=199.8
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCc
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTD 606 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 606 (833)
.++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.++++++||||+++++++...+
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~----- 91 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDEN----- 91 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCC-----
Confidence 357999999999999999999999999999999996432 223457889999999999999999999976554
Q ss_pred eEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccc
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDF 686 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 686 (833)
..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 92 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Df 162 (329)
T PTZ00263 92 RVYFLLEFVVGGELFTHLRKAG------RFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDF 162 (329)
T ss_pred EEEEEEcCCCCChHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeec
Confidence 8999999999999999998654 688999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccc
Q 040925 687 GLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIV 766 (833)
Q Consensus 687 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~ 766 (833)
|+++...... ....||+.|+|||++.+..++.++|||| +|+++|+++++..|+......
T Consensus 163 g~~~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~Diws----------lG~il~elltg~~pf~~~~~~ 221 (329)
T PTZ00263 163 GFAKKVPDRT-----------FTLCGTPEYLAPEVIQSKGHGKAVDWWT----------MGVLLYEFIAGYPPFFDDTPF 221 (329)
T ss_pred cCceEcCCCc-----------ceecCChhhcCHHHHcCCCCCCcceeec----------hHHHHHHHHcCCCCCCCCCHH
Confidence 9998654321 1246999999999999999999999999 888899999998887522111
Q ss_pred cccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCC-----HHHHHHH
Q 040925 767 DPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMD-----MRDVVAK 820 (833)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~eil~~ 820 (833)
........... ..+..+...+.+++.+||+.||++||+ ++++++.
T Consensus 222 --~~~~~i~~~~~-------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 222 --RIYEKILAGRL-------KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred --HHHHHHhcCCc-------CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 00011111100 011123456789999999999999997 6777654
No 61
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-37 Score=332.60 Aligned_cols=258 Identities=26% Similarity=0.421 Sum_probs=210.9
Q ss_pred CccCceeccCcceEEEEEEECCCc---eEEEEEEeeccCCc-chhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceE
Q 040925 533 FSSSNMIGQGSFGYVYKGTLGEDE---MIVAVKVINLKYKG-ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 533 y~~~~~lg~G~~g~Vy~~~~~~~~---~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
..+.++||.|.||+||+|+.+..+ ..||||.++....+ ...+|..|+.||.++.||||+++.|+..... -.
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~-----Pv 705 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSK-----PV 705 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCc-----ee
Confidence 457799999999999999987555 57999999877543 4578999999999999999999999976554 78
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
+||+|||++|+|+.++..+.+ .+++.+...++++|+.|++||-+. ++|||||..+|||++.+..+|++|||+
T Consensus 706 MIiTEyMENGsLDsFLR~~DG-----qftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGL 777 (996)
T KOG0196|consen 706 MIITEYMENGSLDSFLRQNDG-----QFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGL 777 (996)
T ss_pred EEEhhhhhCCcHHHHHhhcCC-----ceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccc
Confidence 999999999999999998775 589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCcc-HHHHHHHhCCCccccccc
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHS-LHEFAKTALPEKVMEIVD 767 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~-l~~~~~~~~p~~~~~~~~ 767 (833)
++.+.++.. ....+. +-.-..+|.|||.+...+++.++||||.|+.+|++.+.|.- +|+|..+++-..+ .
T Consensus 778 SRvledd~~-~~ytt~----GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaI----e 848 (996)
T KOG0196|consen 778 SRVLEDDPE-AAYTTL----GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI----E 848 (996)
T ss_pred eeecccCCC-cccccc----CCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHH----H
Confidence 998765441 111111 11124689999999999999999999999999999888753 3333322221111 0
Q ss_pred ccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhh
Q 040925 768 PSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRE 826 (833)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~ 826 (833)
..+ .-+.+-+|+..+.+||..||++|-.+||.+.||+..|.++.+
T Consensus 849 ~gy--------------RLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 849 QGY--------------RLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR 893 (996)
T ss_pred hcc--------------CCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence 000 123456789999999999999999999999999999998865
No 62
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-38 Score=326.47 Aligned_cols=253 Identities=21% Similarity=0.319 Sum_probs=209.5
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeE
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAF 610 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 610 (833)
+.|.++..||.|+||.||+|..++++...|-|++........+++.-|++||+.++||+||++++.|+..+ ..|+
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~en-----kLwi 106 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFEN-----KLWI 106 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccC-----ceEE
Confidence 34677789999999999999999999899999998777778889999999999999999999999865444 8999
Q ss_pred EEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccc
Q 040925 611 VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690 (833)
Q Consensus 611 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 690 (833)
+.|||.||....++-.-+. .+++.++..+++|++.||.|||+. .|||||||..|||++-+|.++|+|||.+.
T Consensus 107 liEFC~GGAVDaimlEL~r-----~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSA 178 (1187)
T KOG0579|consen 107 LIEFCGGGAVDAIMLELGR-----VLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSA 178 (1187)
T ss_pred EEeecCCchHhHHHHHhcc-----ccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccc
Confidence 9999999999998887653 799999999999999999999999 99999999999999999999999999886
Q ss_pred ccCcccccccccCCCccccccccccccCcccc-----CCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccc
Q 040925 691 FLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYG-----MGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEI 765 (833)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~ 765 (833)
.... +..+..++.|||+|||||+. .+.+|++++|||| +|+++.+|+....|......
T Consensus 179 Kn~~--------t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWS----------lGITLIEMAqiEPPHhelnp 240 (1187)
T KOG0579|consen 179 KNKS--------TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWS----------LGITLIEMAQIEPPHHELNP 240 (1187)
T ss_pred cchh--------HHhhhccccCCcccccchheeeccccCCCchhhhhHHh----------hhhHHHHHhccCCCccccch
Confidence 4332 23344568899999999974 4678999999999 89999999999988763322
Q ss_pred ccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 766 VDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
...-+ .+.+. .+.--..+......+.+++.+|+.+||..||++.++++.
T Consensus 241 MRVll--KiaKS----ePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 241 MRVLL--KIAKS----EPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred HHHHH--HHhhc----CCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 21111 11111 111223455567789999999999999999999999864
No 63
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-37 Score=350.80 Aligned_cols=268 Identities=25% Similarity=0.392 Sum_probs=209.1
Q ss_pred CCccCceeccCcceEEEEEEECCCc-----eEEEEEEeeccC-CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCC
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDE-----MIVAVKVINLKY-KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGT 605 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~-----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 605 (833)
.-+..+.||+|+||.||+|...+.. ..||||.++... .+...+|.+|..+|++++|||||+++|+|.+..
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~---- 768 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG---- 768 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC----
Confidence 4456689999999999999986432 348999997553 345678999999999999999999999996644
Q ss_pred ceEeEEEEecCCCChhhhhccCCCc-cccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEc
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQ-VEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVC 684 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~-~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 684 (833)
..++++|||++|+|..+|.+.+.. .....++..+.+.++.|||+|+.||+++ ++|||||..+|+|++....|||+
T Consensus 769 -~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIa 844 (1025)
T KOG1095|consen 769 -PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIA 844 (1025)
T ss_pred -CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEc
Confidence 789999999999999999986322 1123688999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccc
Q 040925 685 DFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVME 764 (833)
Q Consensus 685 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~ 764 (833)
|||+|+.+-...+...... -.-...|||||.+..+.++.|+||||+|+..||++++|.+.|. ...
T Consensus 845 DFGlArDiy~~~yyr~~~~------a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~---------~~~ 909 (1025)
T KOG1095|consen 845 DFGLARDIYDKDYYRKHGE------AMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYP---------SRS 909 (1025)
T ss_pred ccchhHhhhhchheeccCc------cccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCC---------Ccc
Confidence 9999995544332221100 1234689999999999999999999977777777776654332 111
Q ss_pred cccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhhhhhc
Q 040925 765 IVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRETFLG 830 (833)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~~~~~ 830 (833)
..+....+... ..-..+..|+..+.++|..||+.+|++||++..|++++..+.....+
T Consensus 910 --n~~v~~~~~~g------gRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~ 967 (1025)
T KOG1095|consen 910 --NFEVLLDVLEG------GRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALG 967 (1025)
T ss_pred --hHHHHHHHHhC------CccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhcc
Confidence 01111111111 12234667899999999999999999999999999999998876654
No 64
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.7e-36 Score=320.16 Aligned_cols=258 Identities=21% Similarity=0.285 Sum_probs=196.2
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC--CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceE
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.++++++||||+++++++...+ ..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~ 75 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRG-----KL 75 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCC-----EE
Confidence 47999999999999999999999999999999997542 223467889999999999999999999875544 89
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
++||||++++.+..+..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~lv~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~ 146 (287)
T cd07848 76 YLVFEYVEKNMLELLEEMPN------GVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGF 146 (287)
T ss_pred EEEEecCCCCHHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccC
Confidence 99999999877765543322 588999999999999999999999 999999999999999999999999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccc
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDP 768 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~ 768 (833)
+........ .......||+.|+|||++.+..++.++|||| .|++++++.++..|+......+.
T Consensus 147 ~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws----------lGvil~el~~g~~pf~~~~~~~~ 209 (287)
T cd07848 147 ARNLSEGSN-------ANYTEYVATRWYRSPELLLGAPYGKAVDMWS----------VGCILGELSDGQPLFPGESEIDQ 209 (287)
T ss_pred ccccccccc-------ccccccccccccCCcHHHcCCCCCCchhHHh----------HHHHHHHHHhCCCCCCCCCHHHH
Confidence 986543211 1112346899999999999989999999999 77778888888776642211110
Q ss_pred cchhh-------------hccc------cch----hhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 769 SLLME-------------VMTN------NSM----IQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 769 ~~~~~-------------~~~~------~~~----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
..... .... ... ............+..+.+++.+||++||++|||++|+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 210 LFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred HHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000 0000 000 000000111224567999999999999999999999875
No 65
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=2.3e-36 Score=315.06 Aligned_cols=257 Identities=22% Similarity=0.323 Sum_probs=199.8
Q ss_pred hcCCccCceeccCcceEEEEEEEC---CCceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCC
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLG---EDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGT 605 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 605 (833)
..+|++.+.||+|+||.||+|.+. ..+..||+|.++.... ...+.+.+|+..+++++||||+++++++...+
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~---- 79 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGN---- 79 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCC----
Confidence 357899999999999999999874 3567899999975432 23457889999999999999999999976544
Q ss_pred ceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcc
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 685 (833)
..++||||+++|+|.+++..... .+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+|++|
T Consensus 80 -~~~lv~e~~~~~~L~~~l~~~~~-----~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~d 150 (266)
T cd05064 80 -TMMIVTEYMSNGALDSFLRKHEG-----QLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISG 150 (266)
T ss_pred -CcEEEEEeCCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECC
Confidence 78999999999999999976432 589999999999999999999999 999999999999999999999999
Q ss_pred cccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCcccc
Q 040925 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVME 764 (833)
Q Consensus 686 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~ 764 (833)
||.+......... ......++..|+|||++.+..++.++|||| +|++++++++ +..|+....
T Consensus 151 fg~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s----------lG~~l~ell~~g~~p~~~~~ 213 (266)
T cd05064 151 FRRLQEDKSEAIY-------TTMSGKSPVLWAAPEAIQYHHFSSASDVWS----------FGIVMWEVMSYGERPYWDMS 213 (266)
T ss_pred Ccccccccccchh-------cccCCCCceeecCHHHHhhCCccchhHHHH----------HHHHHHHHhcCCCCCcCcCC
Confidence 9987653222110 011223567899999999999999999999 7777777654 666654221
Q ss_pred cccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 040925 765 IVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHT 824 (833)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i 824 (833)
. ...... +.... ....+..++..+.+++.+||+.+|++|||++||.+.|.++
T Consensus 214 ~--~~~~~~-~~~~~-----~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 214 G--QDVIKA-VEDGF-----RLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred H--HHHHHH-HHCCC-----CCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 1 111111 11110 0112334677889999999999999999999999998764
No 66
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=3.8e-36 Score=322.55 Aligned_cols=243 Identities=23% Similarity=0.278 Sum_probs=194.9
Q ss_pred ceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEEE
Q 040925 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFE 613 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 613 (833)
+.||+|+||.||+|++..+++.||+|+++... ......+.+|+++++.++||||+++++++...+ ..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~~~lv~E 75 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKD-----RLCFVME 75 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC-----EEEEEEe
Confidence 46999999999999999999999999997432 233457788999999999999999999865554 8999999
Q ss_pred ecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccC
Q 040925 614 YMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLS 693 (833)
Q Consensus 614 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 693 (833)
|+++|+|.+++.... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 y~~~g~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~ 146 (328)
T cd05593 76 YVNGGELFFHLSRER------VFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGI 146 (328)
T ss_pred CCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCC
Confidence 999999999987654 689999999999999999999999 99999999999999999999999999987532
Q ss_pred cccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchhh
Q 040925 694 DHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLME 773 (833)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~~ 773 (833)
... .......||+.|+|||++.+..++.++|||| .|+++++++++..|+...... .....
T Consensus 147 ~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~Diws----------lGvil~elltG~~Pf~~~~~~--~~~~~ 206 (328)
T cd05593 147 TDA--------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWG----------LGVVMYEMMCGRLPFYNQDHE--KLFEL 206 (328)
T ss_pred Ccc--------cccccccCCcCccChhhhcCCCCCccCCccc----------cchHHHHHhhCCCCCCCCCHH--HHHHH
Confidence 211 1112356999999999999989999999999 888899999999887532110 11111
Q ss_pred hccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCC-----CHHHHHHH
Q 040925 774 VMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERM-----DMRDVVAK 820 (833)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~ 820 (833)
...... ..+...+..+.+++.+||..||++|| ++.|+++.
T Consensus 207 ~~~~~~-------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 207 ILMEDI-------KFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred hccCCc-------cCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 111100 11223456788999999999999997 89998865
No 67
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=3.1e-36 Score=326.15 Aligned_cols=264 Identities=23% Similarity=0.266 Sum_probs=197.5
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccC--CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
+|++.+.||+|+||.||+|++..+++.||||+++... ......+.+|++++++++||||+++++++...........|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 5889999999999999999999999999999986432 22345688999999999999999999988655434445689
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||++ ++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 81 lv~e~~~-~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~ 150 (338)
T cd07859 81 VVFELME-SDLHQVIKAND------DLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLA 150 (338)
T ss_pred EEEecCC-CCHHHHHHhcc------cCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccc
Confidence 9999995 69999987654 689999999999999999999999 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCC--CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG--SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD 767 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~ 767 (833)
+......... .......||+.|+|||++.+ ..++.++|||| +|+++++++++..|+.......
T Consensus 151 ~~~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwS----------lGvvl~el~tg~~pf~~~~~~~ 215 (338)
T cd07859 151 RVAFNDTPTA-----IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWS----------IGCIFAEVLTGKPLFPGKNVVH 215 (338)
T ss_pred cccccccCcc-----ccccCCCCCCCcCCHHHHhccccccCchhHHHH----------HHHHHHHHHcCCCCCCCCChHH
Confidence 8643321111 11123569999999998765 67899999999 7777888888877664221100
Q ss_pred c-------------cchh--------hhccccchhhh-hhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 768 P-------------SLLM--------EVMTNNSMIQE-DKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 768 ~-------------~~~~--------~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
. .... ..........+ .........+..+.+++.+||..||++|||++|+++.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 216 QLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0 0000 00000000000 0000011234567899999999999999999999875
No 68
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=3e-36 Score=322.83 Aligned_cols=243 Identities=23% Similarity=0.269 Sum_probs=194.3
Q ss_pred ceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEEE
Q 040925 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFE 613 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 613 (833)
+.||+|+||.||+|++..+++.||+|+++... ......+.+|++++++++||||+++++++...+ ..|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~-----~~~lv~E 75 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD-----RLCFVME 75 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCC-----EEEEEEe
Confidence 47999999999999999899999999997432 223456778999999999999999999876544 8999999
Q ss_pred ecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccC
Q 040925 614 YMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLS 693 (833)
Q Consensus 614 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 693 (833)
|+++|+|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 ~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~ 146 (323)
T cd05595 76 YANGGELFFHLSRER------VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 146 (323)
T ss_pred CCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhcccc
Confidence 999999999887654 689999999999999999999999 99999999999999999999999999987532
Q ss_pred cccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchhh
Q 040925 694 DHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLME 773 (833)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~~ 773 (833)
... .......||+.|+|||++.+..++.++|||| +|+++|+++++..|+...+.. .....
T Consensus 147 ~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS----------lGvil~ell~g~~Pf~~~~~~--~~~~~ 206 (323)
T cd05595 147 SDG--------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWG----------LGVVMYEMMCGRLPFYNQDHE--RLFEL 206 (323)
T ss_pred CCC--------CccccccCCcCcCCcccccCCCCCchhchhh----------hHHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence 211 1112356999999999999999999999999 888999999999887522110 11111
Q ss_pred hccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCC-----CHHHHHHH
Q 040925 774 VMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERM-----DMRDVVAK 820 (833)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~ 820 (833)
...... ..+..+++.+.+++.+||..||++|| ++.++++.
T Consensus 207 ~~~~~~-------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 207 ILMEEI-------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred HhcCCC-------CCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 111110 01223456788999999999999998 88888764
No 69
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=2.4e-36 Score=324.79 Aligned_cols=248 Identities=22% Similarity=0.261 Sum_probs=199.0
Q ss_pred HhcCCccCceeccCcceEEEEEEECCCc-eEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCC
Q 040925 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDE-MIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKG 604 (833)
Q Consensus 529 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~-~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 604 (833)
..++|++.+.||+|+||.||+|.+..++ ..||+|++.... ....+.+.+|+++++.++||||+++++++....
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~--- 104 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDES--- 104 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCC---
Confidence 3457999999999999999999876554 789999986432 233457889999999999999999999976554
Q ss_pred CceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEc
Q 040925 605 TDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVC 684 (833)
Q Consensus 605 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 684 (833)
..++||||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+
T Consensus 105 --~~~lv~Ey~~~g~L~~~i~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~ 173 (340)
T PTZ00426 105 --YLYLVLEFVIGGEFFTFLRRNK------RFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMT 173 (340)
T ss_pred --EEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEe
Confidence 8999999999999999998654 689999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccc
Q 040925 685 DFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVME 764 (833)
Q Consensus 685 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~ 764 (833)
|||+++...... ....||+.|||||++.+..++.++|||| .|+++|++++|..|+...+
T Consensus 174 DFG~a~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~DiwS----------lGvil~ell~G~~Pf~~~~ 232 (340)
T PTZ00426 174 DFGFAKVVDTRT-----------YTLCGTPEYIAPEILLNVGHGKAADWWT----------LGIFIYEILVGCPPFYANE 232 (340)
T ss_pred cCCCCeecCCCc-----------ceecCChhhcCHHHHhCCCCCccccccc----------hhhHHHHHhcCCCCCCCCC
Confidence 999998653311 1346999999999999888999999999 8889999999998876322
Q ss_pred cccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCC-----CHHHHHHH
Q 040925 765 IVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERM-----DMRDVVAK 820 (833)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~ 820 (833)
.. ........... ..+...++.+.+++.+|++.||++|+ |++++++.
T Consensus 233 ~~--~~~~~i~~~~~-------~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 233 PL--LIYQKILEGII-------YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred HH--HHHHHHhcCCC-------CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 10 01111111110 01122345678999999999999995 88888765
No 70
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.9e-36 Score=323.13 Aligned_cols=258 Identities=23% Similarity=0.351 Sum_probs=198.4
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceE
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
.++|++.+.||+|+||.||+|++..++..||+|.++.... .....+.+|++++++++||||+++++++...+ ..
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~ 78 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-----EI 78 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECC-----EE
Confidence 3689999999999999999999998999999999875432 23457899999999999999999999986654 89
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
++||||+++|+|.+++.... .+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~ 150 (333)
T cd06650 79 SICMEHMDGGSLDQVLKKAG------RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGV 150 (333)
T ss_pred EEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCc
Confidence 99999999999999997654 5889999999999999999999752 799999999999999999999999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccc
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDP 768 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~ 768 (833)
+....... .....||+.|+|||++.+..++.++|||| +|++++++.++..|+......+-
T Consensus 151 ~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Dvws----------lG~il~~l~~g~~p~~~~~~~~~ 210 (333)
T cd06650 151 SGQLIDSM----------ANSFVGTRSYMSPERLQGTHYSVQSDIWS----------MGLSLVEMAIGRYPIPPPDAKEL 210 (333)
T ss_pred chhhhhhc----------cccCCCCccccCHHHhcCCCCCcHHHHHH----------HHHHHHHHHHCCCCCCCcchhHH
Confidence 87553321 11245899999999999988999999999 77778888887777542110000
Q ss_pred cc------hhhh-----------cc--------ccc------------hhhhhhhhchHHHHHHHHHHhhccCCCCCCCC
Q 040925 769 SL------LMEV-----------MT--------NNS------------MIQEDKRVKTEECLNAIIRTGVLCSMESPFER 811 (833)
Q Consensus 769 ~~------~~~~-----------~~--------~~~------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 811 (833)
.. .... .. ... ............++.++.+++.+||+.||++|
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R 290 (333)
T cd06650 211 ELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAER 290 (333)
T ss_pred HHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccC
Confidence 00 0000 00 000 00000000001134568899999999999999
Q ss_pred CCHHHHHHH
Q 040925 812 MDMRDVVAK 820 (833)
Q Consensus 812 Pt~~eil~~ 820 (833)
||++|+++.
T Consensus 291 pt~~ell~h 299 (333)
T cd06650 291 ADLKQLMVH 299 (333)
T ss_pred cCHHHHhhC
Confidence 999999765
No 71
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2.5e-36 Score=322.04 Aligned_cols=241 Identities=22% Similarity=0.295 Sum_probs=192.6
Q ss_pred eccCcceEEEEEEECCCceEEEEEEeecc---CCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEEEec
Q 040925 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLK---YKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYM 615 (833)
Q Consensus 539 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 615 (833)
||+|+||.||+|++..+++.||+|+++.. .......+.+|++++++++||||+++++++...+ ..++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~e~~ 75 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPE-----KLYLVLAFI 75 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCC-----eEEEEEcCC
Confidence 69999999999999999999999999643 2233456788999999999999999999875544 899999999
Q ss_pred CCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccCcc
Q 040925 616 ENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDH 695 (833)
Q Consensus 616 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 695 (833)
++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 76 ~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 146 (312)
T cd05585 76 NGGELFHHLQREG------RFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD 146 (312)
T ss_pred CCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccC
Confidence 9999999997654 689999999999999999999999 9999999999999999999999999998753221
Q ss_pred cccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchhhhc
Q 040925 696 QLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVM 775 (833)
Q Consensus 696 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~~~~ 775 (833)
. .......||+.|+|||++.+..++.++|||| .|+++++++++..|+..... ........
T Consensus 147 ~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws----------lGvil~el~tg~~pf~~~~~--~~~~~~~~ 206 (312)
T cd05585 147 D--------DKTNTFCGTPEYLAPELLLGHGYTKAVDWWT----------LGVLLYEMLTGLPPFYDENV--NEMYRKIL 206 (312)
T ss_pred C--------CccccccCCcccCCHHHHcCCCCCCccceec----------hhHHHHHHHhCCCCcCCCCH--HHHHHHHH
Confidence 1 1122356999999999999999999999999 88899999999988752211 11111111
Q ss_pred cccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCC---HHHHHHH
Q 040925 776 TNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMD---MRDVVAK 820 (833)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt---~~eil~~ 820 (833)
... ...+...++.+.+++.+||..||++||+ +.|++..
T Consensus 207 ~~~-------~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 207 QEP-------LRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred cCC-------CCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 111 1112335567889999999999999985 5666543
No 72
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.6e-36 Score=301.30 Aligned_cols=260 Identities=23% Similarity=0.263 Sum_probs=208.2
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
++|+..+.||.|.-|+||+|..++++..+|+|++.... .....++..|.+||+.++||.++.+|+.+..+. +
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~-----~ 151 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDK-----Y 151 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccc-----e
Confidence 45777899999999999999999999999999997543 233457788999999999999999999965554 9
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.|+|||||+||+|..+.+++... .+++..++.++..++-||+|||-. |||+|||||+||||.++|.+.|+||.
T Consensus 152 ~cl~meyCpGGdL~~LrqkQp~~----~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFD 224 (459)
T KOG0610|consen 152 SCLVMEYCPGGDLHSLRQKQPGK----RFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFD 224 (459)
T ss_pred eEEEEecCCCccHHHHHhhCCCC----ccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeecc
Confidence 99999999999999999887754 799999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcc-c------------------------------ccc-----------------cccCCCccccccccccccCc
Q 040925 688 LAKFLSDH-Q------------------------------LDT-----------------AVKTPSSSIGLKGTVGYVAP 719 (833)
Q Consensus 688 ~a~~~~~~-~------------------------------~~~-----------------~~~~~~~~~~~~gt~~y~aP 719 (833)
++...... . ... ...+..+..+++||-.|.||
T Consensus 225 LS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAP 304 (459)
T KOG0610|consen 225 LSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAP 304 (459)
T ss_pred ccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccc
Confidence 88644210 0 000 01122345678999999999
Q ss_pred cccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHH
Q 040925 720 EYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRT 799 (833)
Q Consensus 720 E~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 799 (833)
|++.|...+.++|+|+ +|+.+||++.|.-|+.-.. ..+-...++......+ .....+....+|
T Consensus 305 EvI~G~GHgsAVDWWt----------fGIflYEmLyG~TPFKG~~--~~~Tl~NIv~~~l~Fp-----~~~~vs~~akDL 367 (459)
T KOG0610|consen 305 EVIRGEGHGSAVDWWT----------FGIFLYEMLYGTTPFKGSN--NKETLRNIVGQPLKFP-----EEPEVSSAAKDL 367 (459)
T ss_pred eeeecCCCCchhhHHH----------HHHHHHHHHhCCCCcCCCC--chhhHHHHhcCCCcCC-----CCCcchhHHHHH
Confidence 9999999999999999 8999999999999976222 1122222222222111 112456778999
Q ss_pred hhccCCCCCCCCCC----HHHHHH
Q 040925 800 GVLCSMESPFERMD----MRDVVA 819 (833)
Q Consensus 800 i~~cl~~dP~~RPt----~~eil~ 819 (833)
|++.|.+||.+|.. +.||-+
T Consensus 368 Ir~LLvKdP~kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 368 IRKLLVKDPSKRLGSKRGAAEIKR 391 (459)
T ss_pred HHHHhccChhhhhccccchHHhhc
Confidence 99999999999997 666644
No 73
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.9e-36 Score=325.68 Aligned_cols=252 Identities=20% Similarity=0.239 Sum_probs=192.4
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeE
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAF 610 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 610 (833)
++|++.+.||+|+||.||+|.+..+++.||+|... .+.+.+|++++++++||||+++++++.... ..++
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~-----~~~l 160 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNK-----FTCL 160 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECC-----eeEE
Confidence 57999999999999999999999999999999753 245688999999999999999999976544 7899
Q ss_pred EEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccc
Q 040925 611 VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690 (833)
Q Consensus 611 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 690 (833)
|||++. ++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|+
T Consensus 161 v~e~~~-~~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~ 230 (391)
T PHA03212 161 ILPRYK-TDLYCYLAAKR------NIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAAC 230 (391)
T ss_pred EEecCC-CCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccc
Confidence 999995 69998887654 688999999999999999999999 99999999999999999999999999997
Q ss_pred ccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccccc-
Q 040925 691 FLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPS- 769 (833)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~- 769 (833)
...... ........||+.|+|||++.+..++.++|||| +|+++|+++++..|+...+..+..
T Consensus 231 ~~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS----------lGvil~elltg~~p~~~~~~~~~~~ 293 (391)
T PHA03212 231 FPVDIN-------ANKYYGWAGTIATNAPELLARDPYGPAVDIWS----------AGIVLFEMATCHDSLFEKDGLDGDC 293 (391)
T ss_pred cccccc-------ccccccccCccCCCChhhhcCCCCCcHHHHHH----------HHHHHHHHHHCCCCcCCcccccccC
Confidence 543211 11122357999999999999999999999999 666677777665543211100000
Q ss_pred ----ch----------------------hhhc---cccchhhhhhh---hchHHHHHHHHHHhhccCCCCCCCCCCHHHH
Q 040925 770 ----LL----------------------MEVM---TNNSMIQEDKR---VKTEECLNAIIRTGVLCSMESPFERMDMRDV 817 (833)
Q Consensus 770 ----~~----------------------~~~~---~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei 817 (833)
.. .... .......+..+ ....+.+..+.+++.+||+.||++|||++|+
T Consensus 294 ~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~el 373 (391)
T PHA03212 294 DSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEAL 373 (391)
T ss_pred chhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHH
Confidence 00 0000 00000000001 1112346678999999999999999999999
Q ss_pred HHH
Q 040925 818 VAK 820 (833)
Q Consensus 818 l~~ 820 (833)
++.
T Consensus 374 L~h 376 (391)
T PHA03212 374 LDF 376 (391)
T ss_pred hcC
Confidence 864
No 74
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=5.2e-36 Score=327.07 Aligned_cols=264 Identities=22% Similarity=0.368 Sum_probs=198.9
Q ss_pred hcCCccCceeccCcceEEEEEEE-----CCCceEEEEEEeeccC-CcchhHHHHHHHHHhhc-CCCccceEeeEeecCCC
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTL-----GEDEMIVAVKVINLKY-KGASRSFVAECEALRNI-RHRNLIKIITICSSTDF 602 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 602 (833)
.++|++.+.||+|+||.||+|++ .+++..||||+++... ....+.+.+|+++++.+ +||||++++++|...+
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~- 112 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGG- 112 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC-
Confidence 45799999999999999999974 3457789999997432 22345788999999999 8999999999976554
Q ss_pred CCCceEeEEEEecCCCChhhhhccCCCc----------------------------------------------------
Q 040925 603 KGTDFKAFVFEYMENGSLKDWLHQSDDQ---------------------------------------------------- 630 (833)
Q Consensus 603 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~---------------------------------------------------- 630 (833)
..++||||+++|+|.+++......
T Consensus 113 ----~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 188 (375)
T cd05104 113 ----PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS 188 (375)
T ss_pred ----cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence 789999999999999998653210
Q ss_pred -----------------cccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccC
Q 040925 631 -----------------VEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLS 693 (833)
Q Consensus 631 -----------------~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 693 (833)
.....+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 265 (375)
T cd05104 189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIR 265 (375)
T ss_pred cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceecc
Confidence 0012478899999999999999999999 99999999999999999999999999998654
Q ss_pred cccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCcccccccccchh
Q 040925 694 DHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEIVDPSLLM 772 (833)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~~~~~~~~ 772 (833)
...... ......++..|+|||++.+..++.++|||| +|++++++++ +..|+..... +... .
T Consensus 266 ~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~sDi~s----------lG~~l~ellt~g~~p~~~~~~-~~~~-~ 327 (375)
T cd05104 266 NDSNYV------VKGNARLPVKWMAPESIFNCVYTFESDVWS----------YGILLWEIFSLGSSPYPGMPV-DSKF-Y 327 (375)
T ss_pred Cccccc------ccCCCCCCcceeChhHhcCCCCCCCCCHHH----------HHHHHHHHHhcCCCCCCCCCc-hHHH-H
Confidence 322110 011123567899999999999999999999 7777888776 5555432110 1111 1
Q ss_pred hhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 040925 773 EVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHT 824 (833)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i 824 (833)
....... ....+...+.++.+++.+||+.||++|||+.||++.|++.
T Consensus 328 ~~~~~~~-----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 328 KMIKEGY-----RMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred HHHHhCc-----cCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 1111110 0001122356788999999999999999999999999863
No 75
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=7e-36 Score=315.01 Aligned_cols=258 Identities=22% Similarity=0.307 Sum_probs=192.9
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceE
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
.++|++.+.||+|+||.||+|++..+++.||+|+++.... .....+.+|++++++++||||+++++++.... ..
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~ 78 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTER-----CL 78 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCC-----eE
Confidence 3579999999999999999999999999999999974432 23456789999999999999999999965443 88
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
++||||++ |+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~-~~l~~~l~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~ 149 (288)
T cd07871 79 TLVFEYLD-SDLKQYLDNCGN-----LMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGL 149 (288)
T ss_pred EEEEeCCC-cCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcc
Confidence 99999997 499998875432 478899999999999999999999 999999999999999999999999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD 767 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~ 767 (833)
++....... ......||+.|+|||++.+ ..++.++|||| .|+++++++++..|+......+
T Consensus 150 ~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws----------lG~~l~~l~~g~~pf~~~~~~~ 211 (288)
T cd07871 150 ARAKSVPTK--------TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWG----------VGCILYEMATGRPMFPGSTVKE 211 (288)
T ss_pred eeeccCCCc--------cccCceecccccChHHhcCCcccCcHHHHHH----------HHHHHHHHHhCCCCCCCCCHHH
Confidence 975432211 1122458999999998765 56899999999 6777777777776653211100
Q ss_pred -------------ccchhhhccc----cchhhh----hhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 768 -------------PSLLMEVMTN----NSMIQE----DKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 768 -------------~~~~~~~~~~----~~~~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
+......... ....+. ..............+++.+|+..||.+|||++|+++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 212 ELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred HHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000000 000000 000001123456789999999999999999999975
No 76
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=4.7e-36 Score=327.74 Aligned_cols=260 Identities=18% Similarity=0.223 Sum_probs=199.1
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
++|++.+.||+|+||.||+|++..+++.||||+++... ......+.+|+++++.++||||+++++++...+ .
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~-----~ 75 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDEN-----Y 75 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC-----e
Confidence 47999999999999999999999999999999997432 223456788999999999999999999976554 8
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.|+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 146 (364)
T cd05599 76 LYLIMEYLPGGDMMTLLMKKD------TFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFG 146 (364)
T ss_pred EEEEECCCCCcHHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecc
Confidence 999999999999999997654 689999999999999999999999 99999999999999999999999999
Q ss_pred cccccCccccccccc------------------------------CCCccccccccccccCccccCCCCCCcccccccCC
Q 040925 688 LAKFLSDHQLDTAVK------------------------------TPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGR 737 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~ 737 (833)
+++.+.......... ........+||+.|+|||++.+..++.++||||
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS-- 224 (364)
T cd05599 147 LCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWS-- 224 (364)
T ss_pred cceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeec--
Confidence 987543221100000 000112346999999999999999999999999
Q ss_pred cCCCccccCCccHHHHHHHhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCC---H
Q 040925 738 RPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMD---M 814 (833)
Q Consensus 738 ~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt---~ 814 (833)
+|++++++++|..|+....... ............. .......++.+.+++.+|+. +|.+|++ +
T Consensus 225 --------lG~il~el~~G~~Pf~~~~~~~--~~~~i~~~~~~~~---~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~ 290 (364)
T cd05599 225 --------LGVIMYEMLVGYPPFCSDNPQE--TYRKIINWKETLQ---FPDEVPLSPEAKDLIKRLCC-EAERRLGNNGV 290 (364)
T ss_pred --------chhHHHHhhcCCCCCCCCCHHH--HHHHHHcCCCccC---CCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCH
Confidence 8888999999988875322111 0011111000000 00011234567788888986 9999998 8
Q ss_pred HHHHHH
Q 040925 815 RDVVAK 820 (833)
Q Consensus 815 ~eil~~ 820 (833)
+|+++.
T Consensus 291 ~~ll~h 296 (364)
T cd05599 291 NEIKSH 296 (364)
T ss_pred HHHhcC
Confidence 888764
No 77
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=4.3e-36 Score=327.37 Aligned_cols=266 Identities=20% Similarity=0.333 Sum_probs=200.5
Q ss_pred HhcCCccCceeccCcceEEEEEEECC-----CceEEEEEEeeccCC-cchhHHHHHHHHHhhc-CCCccceEeeEeecCC
Q 040925 529 ATGEFSSSNMIGQGSFGYVYKGTLGE-----DEMIVAVKVINLKYK-GASRSFVAECEALRNI-RHRNLIKIITICSSTD 601 (833)
Q Consensus 529 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 601 (833)
..++|++.+.||+|+||.||+|++.. ++..||||+++.... .....+.+|+++++.+ +||||++++++|....
T Consensus 36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~ 115 (374)
T cd05106 36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGG 115 (374)
T ss_pred cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence 34579999999999999999998643 335799999975432 2345688999999999 8999999999976554
Q ss_pred CCCCceEeEEEEecCCCChhhhhccCCCc---------------------------------------------------
Q 040925 602 FKGTDFKAFVFEYMENGSLKDWLHQSDDQ--------------------------------------------------- 630 (833)
Q Consensus 602 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~--------------------------------------------------- 630 (833)
..++||||+++|+|.+++......
T Consensus 116 -----~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (374)
T cd05106 116 -----PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSS 190 (374)
T ss_pred -----CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccc
Confidence 789999999999999998643210
Q ss_pred -------------cccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccCcccc
Q 040925 631 -------------VEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQL 697 (833)
Q Consensus 631 -------------~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~ 697 (833)
....++++.++++++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 191 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~ 267 (374)
T cd05106 191 SSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN 267 (374)
T ss_pred ccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc
Confidence 0112478899999999999999999999 999999999999999999999999999976543221
Q ss_pred cccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCcccccccccchhhhcc
Q 040925 698 DTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEIVDPSLLMEVMT 776 (833)
Q Consensus 698 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~~~~~~~~~~~~ 776 (833)
.. ......+++.|||||++.+..++.++|||| +|++++++++ +..|+..... +... .....
T Consensus 268 ~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwS----------lGvil~ellt~G~~Pf~~~~~-~~~~-~~~~~ 329 (374)
T cd05106 268 YV------VKGNARLPVKWMAPESIFDCVYTVQSDVWS----------YGILLWEIFSLGKSPYPGILV-NSKF-YKMVK 329 (374)
T ss_pred ee------eccCCCCccceeCHHHhcCCCCCccccHHH----------HHHHHHHHHhCCCCCCccccc-cHHH-HHHHH
Confidence 10 111123567899999999889999999999 7778888876 7777642211 1111 11111
Q ss_pred ccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhh
Q 040925 777 NNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTR 825 (833)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~ 825 (833)
... ....+...++.+.+++.+||+.||++|||+.+|++.|+++.
T Consensus 330 ~~~-----~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 330 RGY-----QMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred ccc-----CccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 100 00011123567899999999999999999999999998864
No 78
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=9.3e-36 Score=326.58 Aligned_cols=260 Identities=20% Similarity=0.261 Sum_probs=197.5
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceE
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
.|++.+.||+|+||+||+|++..+++.||+|+++... ....+.+.+|++++++++||||+++++++.+.+ ..
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~-----~~ 76 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKD-----NL 76 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCC-----EE
Confidence 5889999999999999999999999999999997432 223456889999999999999999999976554 89
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
++||||+++|+|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 77 ~lv~E~~~gg~L~~~l~~~~------~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl 147 (381)
T cd05626 77 YFVMDYIPGGDMMSLLIRME------VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGL 147 (381)
T ss_pred EEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcC
Confidence 99999999999999997654 688999999999999999999999 999999999999999999999999999
Q ss_pred ccccCccccccc---------------------------------------ccCCCccccccccccccCccccCCCCCCc
Q 040925 689 AKFLSDHQLDTA---------------------------------------VKTPSSSIGLKGTVGYVAPEYGMGSEASM 729 (833)
Q Consensus 689 a~~~~~~~~~~~---------------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 729 (833)
++.......... ..........+||+.|+|||++.+..++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 227 (381)
T cd05626 148 CTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQ 227 (381)
T ss_pred CcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCC
Confidence 864321100000 00000112457999999999999889999
Q ss_pred ccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhc--cCCCC
Q 040925 730 TGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVL--CSMES 807 (833)
Q Consensus 730 ~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~--cl~~d 807 (833)
++|||| +|++++++++|..|+......... .......... ..+....+++++.+++.+ |+..+
T Consensus 228 ~~DiwS----------lG~il~elltG~~Pf~~~~~~~~~--~~i~~~~~~~---~~~~~~~~s~~~~dli~~ll~~~~~ 292 (381)
T cd05626 228 LCDWWS----------VGVILFEMLVGQPPFLAPTPTETQ--LKVINWENTL---HIPPQVKLSPEAVDLITKLCCSAEE 292 (381)
T ss_pred ccceee----------hhhHHHHHHhCCCCCcCCCHHHHH--HHHHcccccc---CCCCCCCCCHHHHHHHHHHccCccc
Confidence 999999 888999999999987632211110 1111000000 000111234556677766 66667
Q ss_pred CCCCCCHHHHHHH
Q 040925 808 PFERMDMRDVVAK 820 (833)
Q Consensus 808 P~~RPt~~eil~~ 820 (833)
|..||+++|+++.
T Consensus 293 ~~~R~~~~~~l~h 305 (381)
T cd05626 293 RLGRNGADDIKAH 305 (381)
T ss_pred ccCCCCHHHHhcC
Confidence 7779999999875
No 79
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=9.2e-36 Score=310.09 Aligned_cols=256 Identities=23% Similarity=0.432 Sum_probs=202.0
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeE
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAF 610 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 610 (833)
.+|++.+.||+|++|.||+|.+..+++.||+|.++.. ....+.+.+|++++++++||||+++++++...+ ..++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~l 79 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-----PFYI 79 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCC-----CcEE
Confidence 4688899999999999999999988999999998643 334567899999999999999999999976554 7899
Q ss_pred EEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccc
Q 040925 611 VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690 (833)
Q Consensus 611 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 690 (833)
||||+++++|.+++...... .+++..++.++.|+++||+|||+. +++||||||+||++++++.+||+|||.+.
T Consensus 80 v~e~~~~~~L~~~~~~~~~~----~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~ 152 (263)
T cd05052 80 ITEFMTYGNLLDYLRECNRQ----EVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR 152 (263)
T ss_pred EEEeCCCCcHHHHHHhCCCC----CCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCcccc
Confidence 99999999999999764322 589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCccccccccc
Q 040925 691 FLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEIVDPS 769 (833)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~~~~~ 769 (833)
......... .....+++.|+|||++.+..++.++|||| +|++++++++ +..|+...... .
T Consensus 153 ~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s----------lG~il~el~t~g~~p~~~~~~~--~ 213 (263)
T cd05052 153 LMTGDTYTA-------HAGAKFPIKWTAPESLAYNKFSIKSDVWA----------FGVLLWEIATYGMSPYPGIDLS--Q 213 (263)
T ss_pred ccccceeec-------cCCCCCccccCCHHHhccCCCCchhHHHH----------HHHHHHHHHcCCCCCCCCCCHH--H
Confidence 765432111 11123467899999999889999999999 7777888876 65554321110 0
Q ss_pred chhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 040925 770 LLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHT 824 (833)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i 824 (833)
. ........ ....+..++..+.+++.+||..||++|||+.++++.|+.+
T Consensus 214 ~-~~~~~~~~-----~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 214 V-YELLEKGY-----RMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred H-HHHHHCCC-----CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 0 01111100 0111233567889999999999999999999999999875
No 80
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=5.7e-36 Score=321.32 Aligned_cols=243 Identities=23% Similarity=0.259 Sum_probs=190.0
Q ss_pred ceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEEE
Q 040925 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFE 613 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 613 (833)
+.||+|+||.||+|++..+++.||+|+++... ......+.+|+++++.++||||+++++++...+ ..|+|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~-----~~~lv~E 75 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD-----RLCFVME 75 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCC-----EEEEEEe
Confidence 47999999999999999999999999997432 223456788999999999999999999866554 8999999
Q ss_pred ecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhh-cCCCCceeeCCCCCCeeecCCCcEEEccccccccc
Q 040925 614 YMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH-HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL 692 (833)
Q Consensus 614 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 692 (833)
|+++|+|.+++.... .+++.+++.++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 ~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~ 146 (325)
T cd05594 76 YANGGELFFHLSRER------VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 146 (325)
T ss_pred CCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeec
Confidence 999999999887654 68999999999999999999997 7 9999999999999999999999999998753
Q ss_pred CcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchh
Q 040925 693 SDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLM 772 (833)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~ 772 (833)
..... ......||+.|+|||++.+..++.++|||| +|+++++++++..|+..... .....
T Consensus 147 ~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~Diws----------lG~il~el~tG~~Pf~~~~~--~~~~~ 206 (325)
T cd05594 147 IKDGA--------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWG----------LGVVMYEMMCGRLPFYNQDH--EKLFE 206 (325)
T ss_pred CCCCc--------ccccccCCcccCCHHHHccCCCCCcccccc----------ccceeeeeccCCCCCCCCCH--HHHHH
Confidence 22111 112346999999999999999999999999 66666677777777642111 00000
Q ss_pred hhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCC-----CHHHHHHH
Q 040925 773 EVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERM-----DMRDVVAK 820 (833)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~ 820 (833)
....... ..+...++.+.+++.+||+.||++|+ ++.++++.
T Consensus 207 ~i~~~~~-------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 207 LILMEEI-------RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred HHhcCCC-------CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 0000000 01122456788999999999999996 89998764
No 81
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=5.6e-36 Score=325.64 Aligned_cols=258 Identities=20% Similarity=0.270 Sum_probs=202.2
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
++|++.+.||+|+||.||+|++..+++.||+|+++... ......+.+|+++++.++||||+++++++.+.+ .
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-----~ 75 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEE-----H 75 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCC-----e
Confidence 47999999999999999999999899999999997432 234567889999999999999999998865544 8
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.++||||+++|+|.+++.... .+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg 146 (350)
T cd05573 76 LYLVMEYMPGGDLMNLLIRKD------VFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFG 146 (350)
T ss_pred EEEEEcCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCC
Confidence 999999999999999998753 689999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccc---------------------cccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccC
Q 040925 688 LAKFLSDHQLDT---------------------AVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNE 746 (833)
Q Consensus 688 ~a~~~~~~~~~~---------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~ 746 (833)
++.......... ............||+.|+|||++.+..++.++|||| +
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS----------l 216 (350)
T cd05573 147 LCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWS----------L 216 (350)
T ss_pred CCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEe----------c
Confidence 998665432000 000011123356999999999999999999999999 7
Q ss_pred CccHHHHHHHhCCCcccccccccchhhhcc--ccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCC-HHHHHHH
Q 040925 747 GHSLHEFAKTALPEKVMEIVDPSLLMEVMT--NNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMD-MRDVVAK 820 (833)
Q Consensus 747 g~~l~~~~~~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-~~eil~~ 820 (833)
|+++++++++..|+....... ....... .... .+....+++.+.+++.+|+. ||++||+ ++|+++.
T Consensus 217 G~il~ell~g~~Pf~~~~~~~--~~~~i~~~~~~~~-----~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 217 GVILYEMLYGFPPFYSDTLQE--TYNKIINWKESLR-----FPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred chhhhhhccCCCCCCCCCHHH--HHHHHhccCCccc-----CCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 888888888888875332111 1111111 0000 00111145678899999997 9999999 9999875
No 82
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=8.1e-36 Score=320.13 Aligned_cols=246 Identities=22% Similarity=0.287 Sum_probs=192.3
Q ss_pred ceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhc-CCCccceEeeEeecCCCCCCceEeEEE
Q 040925 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNI-RHRNLIKIITICSSTDFKGTDFKAFVF 612 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 612 (833)
+.||+|+||.||+|++..+++.||+|+++... ....+.+..|+.++.++ +||||+++++++...+ ..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~-----~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES-----RLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCC-----EEEEEE
Confidence 47999999999999999999999999997542 22345678899988877 7999999999976554 899999
Q ss_pred EecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccccc
Q 040925 613 EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL 692 (833)
Q Consensus 613 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 692 (833)
||+++|+|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 E~~~~~~L~~~~~~~~------~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~ 146 (329)
T cd05618 76 EYVNGGDLMFHMQRQR------KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 146 (329)
T ss_pred eCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccc
Confidence 9999999999887654 689999999999999999999999 9999999999999999999999999998753
Q ss_pred CcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccc-c--
Q 040925 693 SDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDP-S-- 769 (833)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~-~-- 769 (833)
.... .......||+.|+|||++.+..++.++|||| +|+++++++++..|+......+. .
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~Diws----------lG~il~el~~g~~Pf~~~~~~~~~~~~ 208 (329)
T cd05618 147 LRPG--------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWA----------LGVLMFEMMAGRSPFDIVGSSDNPDQN 208 (329)
T ss_pred cCCC--------CccccccCCccccCHHHHcCCCCCCccceec----------ccHHHHHHhhCCCCCccCCCcCCcccc
Confidence 2211 1112356999999999999999999999999 88899999999988752211110 0
Q ss_pred ---chhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCH------HHHHHH
Q 040925 770 ---LLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDM------RDVVAK 820 (833)
Q Consensus 770 ---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~------~eil~~ 820 (833)
.....+... ....+......+.+++.+||+.||++|||+ .++++.
T Consensus 209 ~~~~~~~~i~~~------~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 209 TEDYLFQVILEK------QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred cHHHHHHHHhcC------CCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 000000000 001122345677899999999999999984 566543
No 83
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.3e-35 Score=309.96 Aligned_cols=262 Identities=24% Similarity=0.298 Sum_probs=205.4
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
++|++.+.||+|+||.||+|+...+++.||||.++... ......+.+|++++++++||||+++++++...+ .
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~ 76 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDN-----E 76 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECC-----e
Confidence 57999999999999999999999899999999886422 223356889999999999999999999876544 7
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.++||||+++|+|.+++...... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g 151 (267)
T cd08228 77 LNIVLELADAGDLSQMIKYFKKQ--KRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred EEEEEEecCCCcHHHHHHHhhhc--cCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccc
Confidence 89999999999999988643221 11578999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD 767 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~ 767 (833)
++......... .....|++.|+|||++.+..++.++|+|| +|+++++++++..|+.......
T Consensus 152 ~~~~~~~~~~~--------~~~~~~~~~~~aPE~~~~~~~~~~~Di~s----------lG~~l~el~~g~~p~~~~~~~~ 213 (267)
T cd08228 152 LGRFFSSKTTA--------AHSLVGTPYYMSPERIHENGYNFKSDIWS----------LGCLLYEMAALQSPFYGDKMNL 213 (267)
T ss_pred cceeccchhHH--------HhcCCCCccccChhhhccCCCCchhhHHH----------HHHHHHHHhcCCCCCccccccH
Confidence 98866442211 11245889999999998888999999999 7888888888887764221110
Q ss_pred ccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhh
Q 040925 768 PSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTR 825 (833)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~ 825 (833)
.... ....... ........++..+.+++.+||..+|++|||+.++++.++.++
T Consensus 214 ~~~~-~~~~~~~----~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 214 FSLC-QKIEQCD----YPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred HHHH-HHHhcCC----CCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 1111 1111000 011122345677899999999999999999999999998764
No 84
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=7.8e-36 Score=320.45 Aligned_cols=246 Identities=22% Similarity=0.298 Sum_probs=193.5
Q ss_pred ceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhc-CCCccceEeeEeecCCCCCCceEeEEE
Q 040925 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNI-RHRNLIKIITICSSTDFKGTDFKAFVF 612 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 612 (833)
+.||+|+||.||+|++..+++.||+|+++... ....+.+..|..+++++ +||||+++++++.... ..|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~-----~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTES-----RLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCC-----EEEEEE
Confidence 47999999999999999999999999997532 22345678899999998 6999999999976554 899999
Q ss_pred EecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccccc
Q 040925 613 EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL 692 (833)
Q Consensus 613 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 692 (833)
||+++|+|.+++...+ .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~g~L~~~~~~~~------~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~ 146 (329)
T cd05588 76 EFVSGGDLMFHMQRQR------KLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 146 (329)
T ss_pred eCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCcccccc
Confidence 9999999999887654 689999999999999999999999 9999999999999999999999999998743
Q ss_pred CcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc-cc--
Q 040925 693 SDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD-PS-- 769 (833)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~-~~-- 769 (833)
.... .......||+.|+|||++.+..++.++|||| +|+++|+++++..|+......+ +.
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~Diws----------lG~~l~el~~g~~Pf~~~~~~~~~~~~ 208 (329)
T cd05588 147 IRPG--------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWA----------LGVLMFEMMAGRSPFDIVGMSDNPDQN 208 (329)
T ss_pred ccCC--------CccccccCCccccCHHHHcCCCCCCccceec----------hHHHHHHHHHCCCCccccccccccccc
Confidence 2111 1122356999999999999999999999999 8889999999999886322111 00
Q ss_pred ---chhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCC------HHHHHHH
Q 040925 770 ---LLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMD------MRDVVAK 820 (833)
Q Consensus 770 ---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt------~~eil~~ 820 (833)
...+.+.... ...+..++..+.+++.+||+.||++||| ++++++.
T Consensus 209 ~~~~~~~~~~~~~------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 209 TEDYLFQVILEKQ------IRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred chHHHHHHHHcCC------CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 0111111100 0112234567889999999999999997 5676543
No 85
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.4e-35 Score=313.57 Aligned_cols=262 Identities=21% Similarity=0.308 Sum_probs=193.6
Q ss_pred cCCccCceeccCcceEEEEEEECC-CceEEEEEEeeccCC--cchhHHHHHHHHHhhc---CCCccceEeeEeecCCCCC
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGE-DEMIVAVKVINLKYK--GASRSFVAECEALRNI---RHRNLIKIITICSSTDFKG 604 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~ 604 (833)
++|++.+.||+|+||.||+|++.. +++.||+|+++.... .....+.+|+.+++.+ +||||+++++++.......
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 379999999999999999999853 578899999875432 2234566788877776 6999999999986544444
Q ss_pred CceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEc
Q 040925 605 TDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVC 684 (833)
Q Consensus 605 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 684 (833)
....++||||++ ++|.+++...... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~----~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~ 152 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEP----GVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 152 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEc
Confidence 557899999997 6999998765432 589999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccc
Q 040925 685 DFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVME 764 (833)
Q Consensus 685 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~ 764 (833)
|||+++...... ......||+.|+|||++.+..++.++|||| +|+++++++++..|+....
T Consensus 153 Dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws----------lG~il~el~~g~~~f~~~~ 213 (290)
T cd07862 153 DFGLARIYSFQM---------ALTSVVVTLWYRAPEVLLQSSYATPVDLWS----------VGCIFAEMFRRKPLFRGSS 213 (290)
T ss_pred cccceEeccCCc---------ccccccccccccChHHHhCCCCCCccchHH----------HHHHHHHHHcCCCCcCCCC
Confidence 999997654321 112346899999999998889999999999 6667777777666654211
Q ss_pred cccc--------------cchhhh--ccccch--hhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 765 IVDP--------------SLLMEV--MTNNSM--IQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 765 ~~~~--------------~~~~~~--~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
..+. .+.... ...... ..........+.+..+.+++.+|++.||++|||+.|+++
T Consensus 214 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 214 DVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred HHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 1000 000000 000000 000000111234567789999999999999999999985
No 86
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.4e-35 Score=315.28 Aligned_cols=259 Identities=21% Similarity=0.302 Sum_probs=194.0
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceE
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
.++|++.+.||+|+||.||+|++..+++.||||+++.... .....+.+|+.+++.++||||+++++++.... ..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~ 78 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKE-----TL 78 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCC-----eE
Confidence 3689999999999999999999998999999999974432 23346788999999999999999999976544 89
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
++||||++ +++.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~-~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~ 149 (303)
T cd07869 79 TLVFEYVH-TDLCQYMDKHPG-----GLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGL 149 (303)
T ss_pred EEEEECCC-cCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCc
Confidence 99999996 688888865432 588999999999999999999999 999999999999999999999999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD 767 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~ 767 (833)
++....... ......||+.|+|||++.+ ..++.++|||| .|++++++++|..|+.......
T Consensus 150 ~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws----------lG~il~~l~~g~~pf~~~~~~~ 211 (303)
T cd07869 150 ARAKSVPSH--------TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWG----------VGCIFVEMIQGVAAFPGMKDIQ 211 (303)
T ss_pred ceeccCCCc--------cCCCCcccCCCCChHHHcCCCCCCcHHHHHH----------HHHHHHHHHhCCCCCCCCccHH
Confidence 875432211 1122458999999998765 45888999999 7788888888887764211100
Q ss_pred ccchhh--------------hcc------ccch--hhh--hhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 768 PSLLME--------------VMT------NNSM--IQE--DKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 768 ~~~~~~--------------~~~------~~~~--~~~--~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.....- ... .... ... .........++.+.+++.+|++.||++|||++|+++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 212 DQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred HHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 000000 000 0000 000 0000001123567899999999999999999999864
No 87
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.3e-35 Score=317.55 Aligned_cols=259 Identities=21% Similarity=0.367 Sum_probs=200.2
Q ss_pred cCCccCceeccCcceEEEEEEECCCce----EEEEEEeeccC-CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCC
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEM----IVAVKVINLKY-KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGT 605 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 605 (833)
.+|++.+.||+|+||.||+|++..+++ .||+|+++... ....+.+.+|+.+++.++||||++++|+|...
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~----- 81 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS----- 81 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-----
Confidence 469999999999999999999865554 48999986443 23456788999999999999999999998543
Q ss_pred ceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcc
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 685 (833)
..++|+||+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 82 -~~~~v~e~~~~g~l~~~l~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~D 152 (316)
T cd05108 82 -TVQLITQLMPFGCLLDYVREHKD-----NIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITD 152 (316)
T ss_pred -CceeeeecCCCCCHHHHHHhccc-----cCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcc
Confidence 36799999999999999986542 578899999999999999999999 999999999999999999999999
Q ss_pred cccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCcccc
Q 040925 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVME 764 (833)
Q Consensus 686 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~ 764 (833)
||+++.......... .....++..|+|||++.+..++.++|||| +|+++|++++ +..|+....
T Consensus 153 fG~a~~~~~~~~~~~------~~~~~~~~~y~apE~~~~~~~~~~~Di~s----------lGv~l~el~t~g~~p~~~~~ 216 (316)
T cd05108 153 FGLAKLLGADEKEYH------AEGGKVPIKWMALESILHRIYTHQSDVWS----------YGVTVWELMTFGSKPYDGIP 216 (316)
T ss_pred ccccccccCCCccee------ccCCccceeecChHHhccCCCCchhhhHH----------HHHHHHHHHcCCCCCCCCCC
Confidence 999987654321110 11123567899999999999999999999 7777888776 666654211
Q ss_pred cccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhhh
Q 040925 765 IVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRET 827 (833)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~~ 827 (833)
. ... ........ ....+..++..+.+++.+||..||++|||+.+++..+..+...
T Consensus 217 ~--~~~-~~~~~~~~-----~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~ 271 (316)
T cd05108 217 A--SEI-SSILEKGE-----RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 271 (316)
T ss_pred H--HHH-HHHHhCCC-----CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence 1 011 11111110 0011122445688999999999999999999999999888754
No 88
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.3e-35 Score=312.64 Aligned_cols=261 Identities=24% Similarity=0.404 Sum_probs=201.3
Q ss_pred cCCccCceeccCcceEEEEEEECCCc-----eEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCC
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDE-----MIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFKG 604 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~-----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 604 (833)
++|++.+.||+|+||.||+|.....+ ..||+|.++.... .....+.+|++++++++||||+++++++....
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~--- 81 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQ--- 81 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCC---
Confidence 47899999999999999999886544 6899999864432 23456889999999999999999999975544
Q ss_pred CceEeEEEEecCCCChhhhhccCCCcc----------ccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCee
Q 040925 605 TDFKAFVFEYMENGSLKDWLHQSDDQV----------EVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVL 674 (833)
Q Consensus 605 ~~~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIl 674 (833)
..+++|||+++|+|.+++....... ....+++.+++.++.|++.||+|||+. +++||||||+||+
T Consensus 82 --~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil 156 (283)
T cd05048 82 --PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCL 156 (283)
T ss_pred --ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEE
Confidence 7899999999999999997643211 013688999999999999999999999 9999999999999
Q ss_pred ecCCCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHH
Q 040925 675 LDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFA 754 (833)
Q Consensus 675 l~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~ 754 (833)
+++++.+||+|||+++........ .......+++.|+|||++.+..++.++|||| +|+++++++
T Consensus 157 ~~~~~~~~L~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~s----------lG~il~el~ 220 (283)
T cd05048 157 VGEGLTVKISDFGLSRDIYSADYY------RVQSKSLLPVRWMPPEAILYGKFTTESDIWS----------FGVVLWEIF 220 (283)
T ss_pred EcCCCcEEECCCcceeeccccccc------cccCCCcccccccCHHHhccCcCchhhhHHH----------HHHHHHHHH
Confidence 999999999999999765332211 0111234788999999998889999999999 777777777
Q ss_pred H-HhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 040925 755 K-TALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCH 823 (833)
Q Consensus 755 ~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 823 (833)
+ +..|+..... ... ...+... .....+..++..+.+++.+||..||++|||+.||+++|++
T Consensus 221 ~~g~~p~~~~~~--~~~-~~~i~~~-----~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 221 SYGLQPYYGFSN--QEV-IEMIRSR-----QLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred cCCCCCCCCCCH--HHH-HHHHHcC-----CcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 6 5555432111 111 1111111 0112234567889999999999999999999999999975
No 89
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.2e-35 Score=318.68 Aligned_cols=246 Identities=23% Similarity=0.284 Sum_probs=193.1
Q ss_pred CccCceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHH---hhcCCCccceEeeEeecCCCCCCc
Q 040925 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEAL---RNIRHRNLIKIITICSSTDFKGTD 606 (833)
Q Consensus 533 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~h~niv~~~~~~~~~~~~~~~ 606 (833)
|++.+.||+|+||.||+|.+..+++.||||+++... ....+.+.+|++++ ++++||||+++++++...+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~----- 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTED----- 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCC-----
Confidence 678899999999999999999999999999997432 22345667777665 4567999999999976544
Q ss_pred eEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccc
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDF 686 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 686 (833)
..|+||||+++|+|..++... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 76 ~~~lv~E~~~~~~L~~~~~~~-------~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Df 145 (324)
T cd05589 76 HVCFVMEYAAGGDLMMHIHTD-------VFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADF 145 (324)
T ss_pred EEEEEEcCCCCCcHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcc
Confidence 899999999999999888643 589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccc
Q 040925 687 GLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIV 766 (833)
Q Consensus 687 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~ 766 (833)
|+++...... .......||+.|+|||++.+..++.++|||| +|+++|++++|..|+...+..
T Consensus 146 g~~~~~~~~~--------~~~~~~~g~~~y~aPE~~~~~~~~~~~Diws----------lG~il~el~~G~~pf~~~~~~ 207 (324)
T cd05589 146 GLCKEGMGFG--------DRTSTFCGTPEFLAPEVLTETSYTRAVDWWG----------LGVLIYEMLVGESPFPGDDEE 207 (324)
T ss_pred cCCccCCCCC--------CcccccccCccccCHhHhcCCCCCcccchhh----------HHHHHHHHHhCCCCCCCCCHH
Confidence 9987432211 1122356999999999999999999999999 888999999999887532211
Q ss_pred cccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCC-----CHHHHHHH
Q 040925 767 DPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERM-----DMRDVVAK 820 (833)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~ 820 (833)
.......... ...+..++..+.+++.+||+.||++|| ++.++++.
T Consensus 208 --~~~~~i~~~~-------~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 208 --EVFDSIVNDE-------VRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred --HHHHHHHhCC-------CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 1111111110 011223456788999999999999999 46666553
No 90
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.2e-35 Score=322.47 Aligned_cols=249 Identities=25% Similarity=0.341 Sum_probs=192.2
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
++|+..+.||+|+||.||+|++..+++.||||++..... ...+.+.+|+++++.++|+||+++++++...+ ..+
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~ 148 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNG-----EIQ 148 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCC-----eEE
Confidence 457778999999999999999998999999999964432 23467899999999999999999999965444 889
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||+++|+|.+.. ..++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 149 lv~e~~~~~~L~~~~----------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~ 215 (353)
T PLN00034 149 VLLEFMDGGSLEGTH----------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVS 215 (353)
T ss_pred EEEecCCCCcccccc----------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccc
Confidence 999999999986532 356778889999999999999999 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCC-----CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-----SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVME 764 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~ 764 (833)
+....... ......||..|+|||++.. ...+.++|||| +|+++++++++..|+....
T Consensus 216 ~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Dvws----------lGvil~el~~g~~pf~~~~ 277 (353)
T PLN00034 216 RILAQTMD--------PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWS----------LGVSILEFYLGRFPFGVGR 277 (353)
T ss_pred eecccccc--------cccccccCccccCccccccccccCcCCCcchhHHH----------HHHHHHHHHhCCCCCCCCC
Confidence 86543211 1123469999999998743 23456899999 8888999999998876222
Q ss_pred cccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 765 IVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
..+........... ........++..+.+++.+||..||++|||+.|+++.
T Consensus 278 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 278 QGDWASLMCAICMS-----QPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred CccHHHHHHHHhcc-----CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11111100000000 0011123456778999999999999999999999875
No 91
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=2.1e-35 Score=306.17 Aligned_cols=251 Identities=25% Similarity=0.376 Sum_probs=196.1
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeE
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAF 610 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 610 (833)
++|++.+.||+|+||.||+|+++ .+..+|+|.++.. ....+.+.+|++++++++||||+++++++...+ ..++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~i 76 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQK-----PLYI 76 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCC-----CEEE
Confidence 46889999999999999999986 4567999988633 233567889999999999999999999976544 7899
Q ss_pred EEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccc
Q 040925 611 VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690 (833)
Q Consensus 611 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 690 (833)
||||+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||.++
T Consensus 77 v~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~ 148 (256)
T cd05114 77 VTEFMENGCLLNYLRQRQG-----KLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTR 148 (256)
T ss_pred EEEcCCCCcHHHHHHhCcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCcc
Confidence 9999999999999875432 588999999999999999999999 99999999999999999999999999988
Q ss_pred ccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCccccccccc
Q 040925 691 FLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEIVDPS 769 (833)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~~~~~ 769 (833)
......... .....++..|+|||++.+..++.++|||| +|+.++++.+ +..|+..... ..
T Consensus 149 ~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~s----------~G~~l~el~~~g~~p~~~~~~--~~ 209 (256)
T cd05114 149 YVLDDEYTS-------SSGAKFPVKWSPPEVFNFSKYSSKSDVWS----------FGVLMWEVFTEGKMPFEKKSN--YE 209 (256)
T ss_pred ccCCCceec-------cCCCCCchhhCChhhcccCccchhhhhHH----------HHHHHHHHHcCCCCCCCCCCH--HH
Confidence 654322111 11223567899999998888999999999 7788888887 6666542211 11
Q ss_pred chhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 040925 770 LLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKL 821 (833)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 821 (833)
.......... ...+...+..+.+++.+||..||++|||++++++.|
T Consensus 210 ~~~~i~~~~~------~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 210 VVEMISRGFR------LYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred HHHHHHCCCC------CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 1111111110 001122345789999999999999999999999876
No 92
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.1e-35 Score=334.19 Aligned_cols=255 Identities=19% Similarity=0.204 Sum_probs=201.8
Q ss_pred CCccCceeccCcceEEEEEEECCC-ceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeE
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGED-EMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAF 610 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 610 (833)
.|.+.+.||+|++|.||+|....+ ++.||+|.+..........+.+|+++++.++||||+++++++...+ ..|+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~-----~~~l 142 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDD-----KLLL 142 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECC-----EEEE
Confidence 499999999999999999998777 7889999876554444567888999999999999999999976654 8999
Q ss_pred EEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccc
Q 040925 611 VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690 (833)
Q Consensus 611 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 690 (833)
||||+++|+|.+++...... ..++++.++..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 143 v~E~~~gg~L~~~l~~~~~~--~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~ 217 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLKE--HLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSK 217 (478)
T ss_pred EEECCCCCCHHHHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCce
Confidence 99999999999988653211 12688999999999999999999999 99999999999999999999999999998
Q ss_pred ccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccc
Q 040925 691 FLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSL 770 (833)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~ 770 (833)
....... .......+||+.|+|||++.+..++.++|||| +|+++++++++..|+..... ...
T Consensus 218 ~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s----------lG~~l~el~tg~~Pf~~~~~--~~~ 279 (478)
T PTZ00267 218 QYSDSVS------LDVASSFCGTPYYLAPELWERKRYSKKADMWS----------LGVILYELLTLHRPFKGPSQ--REI 279 (478)
T ss_pred ecCCccc------cccccccCCCccccCHhHhCCCCCCcHHhHHH----------HHHHHHHHHhCCCCCCCCCH--HHH
Confidence 6543211 11122356999999999999999999999999 88889999999888752211 111
Q ss_pred hhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 771 LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
......... ...+..++..+.+++.+||..||++|||+++++..
T Consensus 280 ~~~~~~~~~------~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 280 MQQVLYGKY------DPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred HHHHHhCCC------CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 111111110 01122345678999999999999999999999753
No 93
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=7.3e-36 Score=310.62 Aligned_cols=257 Identities=26% Similarity=0.427 Sum_probs=205.8
Q ss_pred HhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceE
Q 040925 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 529 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
...+|++.+.||+|++|.||+|.+.. +..||+|.++.........+.+|+.+++.++||||+++++++.... ..
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~ 77 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGE-----PV 77 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCC-----Ce
Confidence 45679999999999999999999986 8899999997665545678899999999999999999999976554 78
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
++||||+++|+|.+++...... .+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~~~----~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~ 150 (261)
T cd05148 78 YIITELMEKGSLLAFLRSPEGQ----VLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGL 150 (261)
T ss_pred EEEEeecccCCHHHHHhcCCCC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccc
Confidence 9999999999999999865432 689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCccccccc
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEIVD 767 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~~~ 767 (833)
+.......... ....++..|+|||+..+..++.++|||| +|+.++++.+ +..|+.... .
T Consensus 151 ~~~~~~~~~~~--------~~~~~~~~~~~PE~~~~~~~~~~~Diws----------lG~~l~~l~~~g~~p~~~~~--~ 210 (261)
T cd05148 151 ARLIKEDVYLS--------SDKKIPYKWTAPEAASHGTFSTKSDVWS----------FGILLYEMFTYGQVPYPGMN--N 210 (261)
T ss_pred hhhcCCccccc--------cCCCCceEecCHHHHccCCCCchhhHHH----------HHHHHHHHHcCCCCCCCcCC--H
Confidence 98664432111 1234678899999998888999999999 7788888887 666664221 1
Q ss_pred ccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 040925 768 PSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHT 824 (833)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i 824 (833)
........ ... ....+..+++.+.+++.+||..||++|||++++++.|+.+
T Consensus 211 ~~~~~~~~-~~~-----~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 211 HEVYDQIT-AGY-----RMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred HHHHHHHH-hCC-----cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 11111111 000 1111234567789999999999999999999999999763
No 94
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.2e-35 Score=308.03 Aligned_cols=256 Identities=22% Similarity=0.292 Sum_probs=200.4
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
.++|++.+.||+|+||.||+|++..+++.||+|+++.........+.+|+.++++++||||+++++++...+ ..+
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~-----~~~ 82 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSRE-----KLW 82 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC-----EEE
Confidence 357999999999999999999998899999999997654445567889999999999999999999976544 889
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||+++++|.+++.... .+++.++..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 83 iv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~ 153 (267)
T cd06646 83 ICMEYCGGGSLQDIYHVTG------PLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVA 153 (267)
T ss_pred EEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccc
Confidence 9999999999999987543 689999999999999999999999 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccC---CCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGM---GSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIV 766 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~ 766 (833)
........ ......|++.|+|||.+. ...++.++|||| +|+++++++++..|+......
T Consensus 154 ~~~~~~~~--------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws----------~G~il~el~~g~~p~~~~~~~ 215 (267)
T cd06646 154 AKITATIA--------KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWA----------VGITAIELAELQPPMFDLHPM 215 (267)
T ss_pred eeeccccc--------ccCccccCccccCHhHcccccCCCCcchhhHHH----------HHHHHHHHHhCCCCccccchh
Confidence 86543211 112245899999999874 345788999999 788888888888776422111
Q ss_pred cccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 040925 767 DPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKL 821 (833)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 821 (833)
+..... ..... .+........++..+.+++.+||..||++|||++++++.+
T Consensus 216 ~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 216 RALFLM--SKSNF--QPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred hhheee--ecCCC--CCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 110000 00000 0000111123456788999999999999999999998753
No 95
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=2e-36 Score=315.13 Aligned_cols=257 Identities=24% Similarity=0.376 Sum_probs=208.4
Q ss_pred CCccCceeccCcceEEEEEEECCC----ceEEEEEEeecc-CCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCc
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGED----EMIVAVKVINLK-YKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTD 606 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 606 (833)
..+..++||.|.||.||+|.+... .--||||..+.. ..+..+.|..|..+|+.++|||||+++|+|.+..
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P----- 464 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQP----- 464 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccc-----
Confidence 344568999999999999988432 346899998864 3445678999999999999999999999997664
Q ss_pred eEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccc
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDF 686 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 686 (833)
.|+|||.++.|.|+.|++.... .++......+++||+.||+|||+. ..|||||..+|||+.....|||+||
T Consensus 465 -~WivmEL~~~GELr~yLq~nk~-----sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDF 535 (974)
T KOG4257|consen 465 -MWIVMELAPLGELREYLQQNKD-----SLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADF 535 (974)
T ss_pred -eeEEEecccchhHHHHHHhccc-----cchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeeccc
Confidence 8999999999999999998764 688999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccc
Q 040925 687 GLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIV 766 (833)
Q Consensus 687 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~ 766 (833)
|+++.+.+........ ..-...|||||.+.-..+++++|||-+|+-+|++++.|+..+.+++. .
T Consensus 536 GLSR~~ed~~yYkaS~-------~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkN---------s 599 (974)
T KOG4257|consen 536 GLSRYLEDDAYYKASR-------GKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKN---------S 599 (974)
T ss_pred chhhhccccchhhccc-------cccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccc---------c
Confidence 9999988876544331 12456899999999999999999999666666666665544432221 1
Q ss_pred cccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhh
Q 040925 767 DPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRE 826 (833)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~ 826 (833)
|. .+..- .....+.++.|++.+..++.+||.+||.+||.+.|+...|+.+.+
T Consensus 600 DV--I~~iE------nGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 600 DV--IGHIE------NGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred ce--EEEec------CCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 11 11111 112234567789999999999999999999999999999999876
No 96
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=2.7e-35 Score=310.36 Aligned_cols=263 Identities=24% Similarity=0.344 Sum_probs=197.7
Q ss_pred cCCccCceeccCcceEEEEEEE----CCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCc
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTL----GEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTD 606 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 606 (833)
.+|++.+.||+|+||.||+|.. ..+++.||+|.++.......+.+.+|++++++++||||+++++++...+ ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~---~~ 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG---RR 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCC---CC
Confidence 4789999999999999999984 3468899999987555445568899999999999999999999875432 34
Q ss_pred eEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccc
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDF 686 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 686 (833)
..++||||+++|+|.+++..... .+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+||
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~~-----~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~df 152 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKHRE-----RLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDF 152 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhcCc-----CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCC
Confidence 68999999999999999975432 589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccc---
Q 040925 687 GLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVM--- 763 (833)
Q Consensus 687 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~--- 763 (833)
|+++........... .....++..|+|||+..+..++.++|||| +|+++++++++..+....
T Consensus 153 g~~~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~s----------lG~~l~el~~~~~~~~~~~~~ 217 (284)
T cd05081 153 GLTKVLPQDKEYYKV-----REPGESPIFWYAPESLTESKFSVASDVWS----------FGVVLYELFTYSDKSCSPPAE 217 (284)
T ss_pred cccccccCCCcceee-----cCCCCCceEeeCHHHhccCCcChHHHHHH----------HHHHHHHHhhcCCcCCCcchh
Confidence 999876432211000 01112455699999998888999999999 566666666543332110
Q ss_pred --ccccccch--------hhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 040925 764 --EIVDPSLL--------MEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHT 824 (833)
Q Consensus 764 --~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i 824 (833)
........ .+..... ........++..+.+++.+||..+|++|||++||++.|+.+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 218 FMRMMGNDKQGQMIVYHLIELLKNN-----GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred hhhhcccccccccchHHHHHHHhcC-----CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 00000000 0000000 00011223456789999999999999999999999999876
No 97
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.3e-35 Score=325.48 Aligned_cols=260 Identities=19% Similarity=0.212 Sum_probs=195.1
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
++|++.+.||+|+||.||+|++..+++.||||++.... ......+.+|++++++++||||+++++++...+ .
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~-----~ 75 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKD-----N 75 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-----E
Confidence 37999999999999999999999999999999986431 223456889999999999999999999976544 8
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.|+||||+++|+|.+++...+ .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~i~~~~------~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG 146 (376)
T cd05598 76 LYFVMDYIPGGDMMSLLIRLG------IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFG 146 (376)
T ss_pred EEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCC
Confidence 999999999999999997654 688999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccc-----------------------------------cccCCCccccccccccccCccccCCCCCCcccc
Q 040925 688 LAKFLSDHQLDT-----------------------------------AVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGD 732 (833)
Q Consensus 688 ~a~~~~~~~~~~-----------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 732 (833)
+|..+....... ...........+||+.|||||++.+..++.++|
T Consensus 147 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 226 (376)
T cd05598 147 LCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCD 226 (376)
T ss_pred CCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCccee
Confidence 985332100000 000001112357999999999999999999999
Q ss_pred cccCCcCCCccccCCccHHHHHHHhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCC
Q 040925 733 IFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERM 812 (833)
Q Consensus 733 i~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 812 (833)
||| +|+++|++++|..|+......+.............. .....+++.+.+++.+|+ .+|.+|+
T Consensus 227 iwS----------lGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~-----~~~~~~s~~~~~li~~l~-~~p~~R~ 290 (376)
T cd05598 227 WWS----------VGVILYEMLVGQPPFLADTPAETQLKVINWETTLHI-----PSQAKLSREASDLILRLC-CGAEDRL 290 (376)
T ss_pred eee----------ccceeeehhhCCCCCCCCCHHHHHHHHhccCccccC-----CCCCCCCHHHHHHHHHHh-cCHhhcC
Confidence 999 677777888888876532211110000000000000 011123455677777766 5999999
Q ss_pred ---CHHHHHHH
Q 040925 813 ---DMRDVVAK 820 (833)
Q Consensus 813 ---t~~eil~~ 820 (833)
|+.|+++.
T Consensus 291 ~~~t~~ell~h 301 (376)
T cd05598 291 GKNGADEIKAH 301 (376)
T ss_pred CCCCHHHHhCC
Confidence 88998865
No 98
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.6e-35 Score=321.06 Aligned_cols=259 Identities=19% Similarity=0.217 Sum_probs=195.0
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
++|++.+.||+|+||+||+|++..+++.||+|+++... ......+.+|+.++.+++||+|+++++++.+.. .
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~-----~ 75 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKL-----N 75 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCC-----e
Confidence 47999999999999999999999899999999997432 223356788999999999999999999876544 8
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.|+||||+++|+|.+++.... .+++.+++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFG 146 (363)
T cd05628 76 LYLIMEFLPGGDMMTLLMKKD------TLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFG 146 (363)
T ss_pred EEEEEcCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeecc
Confidence 999999999999999998654 689999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccc---------------------------cCCCccccccccccccCccccCCCCCCcccccccCCcCC
Q 040925 688 LAKFLSDHQLDTAV---------------------------KTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPI 740 (833)
Q Consensus 688 ~a~~~~~~~~~~~~---------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~ 740 (833)
+++........... .........+||+.|+|||++.+..++.++||||
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwS----- 221 (363)
T cd05628 147 LCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWS----- 221 (363)
T ss_pred CcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhh-----
Confidence 99765332110000 0000112457999999999999999999999999
Q ss_pred CccccCCccHHHHHHHhCCCcccccccccchhhhcc--ccchhhhhhhhchHHHHHHHHHHhhccCC--CCCCCCCCHHH
Q 040925 741 DAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMT--NNSMIQEDKRVKTEECLNAIIRTGVLCSM--ESPFERMDMRD 816 (833)
Q Consensus 741 ~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~li~~cl~--~dP~~RPt~~e 816 (833)
+|+++|++++|..|+...... ........ .....++ .. ...+...+++.+++. .++..||+++|
T Consensus 222 -----lGvil~ell~G~~Pf~~~~~~--~~~~~i~~~~~~~~~p~-~~----~~s~~~~~li~~l~~~~~~r~~r~~~~e 289 (363)
T cd05628 222 -----LGVIMYEMLIGYPPFCSETPQ--ETYKKVMNWKETLIFPP-EV----PISEKAKDLILRFCCEWEHRIGAPGVEE 289 (363)
T ss_pred -----hHHHHHHHHhCCCCCCCCCHH--HHHHHHHcCcCcccCCC-cC----CCCHHHHHHHHHHcCChhhcCCCCCHHH
Confidence 888999999999997532211 11111111 0010110 00 123345566655332 34445789999
Q ss_pred HHHH
Q 040925 817 VVAK 820 (833)
Q Consensus 817 il~~ 820 (833)
|++.
T Consensus 290 i~~h 293 (363)
T cd05628 290 IKTN 293 (363)
T ss_pred HhCC
Confidence 9876
No 99
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=3.1e-38 Score=328.27 Aligned_cols=373 Identities=26% Similarity=0.377 Sum_probs=321.3
Q ss_pred cCCCCCCEEEccCCccc-ccCCccCCCCCCCCEEEcCCCcccccCCccccCCCCCcEEECCCcccccccCchhhcCCCCc
Q 040925 20 GNLSDLEVIRIMGNSLG-GKIPTTLGLLRNLVSLNVAENKFSGMFPRSICNISSLELIQLALNRFSGNLPFDIVVNLPNL 98 (833)
Q Consensus 20 ~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L 98 (833)
+-|+..+-+|+++|..+ +..|.....+++++-|.|...++. .+|+.++.|.+|+.|.+++|++. .+..+ ++.|+.|
T Consensus 4 gVLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGE-Ls~Lp~L 80 (1255)
T KOG0444|consen 4 GVLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGE-LSDLPRL 80 (1255)
T ss_pred cccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhh-hccchhh
Confidence 45667777899999997 678999999999999999999998 78999999999999999999987 55433 4688999
Q ss_pred cEEEccCCcce-eeCCccccCCCCCcEEEcccCccccccCcCccCCCcCceEecccccCCCCCCCCcccccccCCCCCCC
Q 040925 99 KALAIGGNNFF-GSIPYSLSNASNLELLDLSVNQFKGNVSIDFSSLKNLLWLNLEQNNLGTGTATDLDFVTFLTNCSSLK 177 (833)
Q Consensus 99 ~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~ 177 (833)
+.+.+..|++. +-+|..+..|..|+.||||+|+++.. |..+..-+++-.|+||+|+|.+||. ..|.+|+.|-
T Consensus 81 Rsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~Ev-P~~LE~AKn~iVLNLS~N~IetIPn------~lfinLtDLL 153 (1255)
T KOG0444|consen 81 RSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLREV-PTNLEYAKNSIVLNLSYNNIETIPN------SLFINLTDLL 153 (1255)
T ss_pred HHHhhhccccccCCCCchhcccccceeeecchhhhhhc-chhhhhhcCcEEEEcccCccccCCc------hHHHhhHhHh
Confidence 99999999986 33666777899999999999999854 5567888889999999999988876 3467888888
Q ss_pred EEEccCCcCcccCChhHhhhcccccEEEccCccccccCChhhhcCCCCCeEeccCCcccccCCccccCCCCCCEEEcccc
Q 040925 178 ALSLADNQFGGELPHSIANLSSTVINFGIGRNQISGTIPPGIRNLVNLIGFGAEENQLHGTIPDAIGELKNLQKLCLFRN 257 (833)
Q Consensus 178 ~L~Ls~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 257 (833)
.||||+|++. ..|+.++.+..|++|.|++|.+....-.-+..+++|+.|.+++.
T Consensus 154 fLDLS~NrLe--------------------------~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~T 207 (1255)
T KOG0444|consen 154 FLDLSNNRLE--------------------------MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNT 207 (1255)
T ss_pred hhccccchhh--------------------------hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccc
Confidence 8888888887 56677788889999999999887554455667788999999987
Q ss_pred cCc-ccCCccccCCCCCCeEEeecccccCCCCCCCCCCCccceeecCCceecccCCcccccccccceeeecCCCccCCCC
Q 040925 258 FLQ-GRIPSGLGNLTKLANLELSSNSLQGNIPSSLGNCQNLMSFTASQNKLTGALPHQLLSITTLSLYLDLSNNLLNGSL 336 (833)
Q Consensus 258 ~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~ 336 (833)
+=+ .-+|.++..+.+|..+|||.|.+. ..|+.+-++++|+.|+||+|+|+ .+.........+ +.|+||.|+++ .+
T Consensus 208 qRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~l-EtLNlSrNQLt-~L 283 (1255)
T KOG0444|consen 208 QRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENL-ETLNLSRNQLT-VL 283 (1255)
T ss_pred cchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhh-hhhccccchhc-cc
Confidence 643 358889999999999999999998 89999999999999999999999 666666666666 78999999999 89
Q ss_pred CcccccCCCcCEEeccCCcCCC-CCCccccCCCCCcEEeecCCccccccCccccCCCCCCeEEccCcccCCCchhhhcCC
Q 040925 337 PLQVGHLKNLVILDISSNQFSG-VIPGTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNVSSNNLSGQIPEFLKNL 415 (833)
Q Consensus 337 ~~~~~~l~~L~~L~ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l 415 (833)
|.++..|+.|+.|.+.+|+++- -+|..++.+.+|+.+..++|++. ..|+.+..+..|+.|.|+.|++- .+|+.+.-|
T Consensus 284 P~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL 361 (1255)
T KOG0444|consen 284 PDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLL 361 (1255)
T ss_pred hHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhc
Confidence 9999999999999999999863 46888999999999999999998 88999999999999999999998 789999999
Q ss_pred CCCceEECccCcCccccCC
Q 040925 416 SVLEFLSLSYNHFEGEVPT 434 (833)
Q Consensus 416 ~~L~~L~l~~N~l~~~~~~ 434 (833)
+.|+.||+.+|+=---||.
T Consensus 362 ~~l~vLDlreNpnLVMPPK 380 (1255)
T KOG0444|consen 362 PDLKVLDLRENPNLVMPPK 380 (1255)
T ss_pred CCcceeeccCCcCccCCCC
Confidence 9999999999986666664
No 100
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.8e-35 Score=324.24 Aligned_cols=260 Identities=18% Similarity=0.185 Sum_probs=195.8
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|++++++++||||+++++++.+.. +
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~-----~ 75 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQ-----Y 75 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-----e
Confidence 47999999999999999999999999999999986431 223456888999999999999999999976554 8
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.|+||||+++|+|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfG 146 (377)
T cd05629 76 LYLIMEFLPGGDLMTMLIKYD------TFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFG 146 (377)
T ss_pred eEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeecc
Confidence 999999999999999997654 688999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccc---------ccc------------------------------CCCccccccccccccCccccCCCCCC
Q 040925 688 LAKFLSDHQLDT---------AVK------------------------------TPSSSIGLKGTVGYVAPEYGMGSEAS 728 (833)
Q Consensus 688 ~a~~~~~~~~~~---------~~~------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~ 728 (833)
+++......... ... ........+||+.|+|||++.+..++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 226 (377)
T cd05629 147 LSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYG 226 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCC
Confidence 996432110000 000 00001124699999999999999999
Q ss_pred cccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCC
Q 040925 729 MTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESP 808 (833)
Q Consensus 729 ~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP 808 (833)
.++|||| +|++++++++|..|+......+ ............ ..+........+.+++.+|+. +|
T Consensus 227 ~~~DiwS----------lGvil~elltG~~Pf~~~~~~~--~~~~i~~~~~~~---~~p~~~~~s~~~~dli~~lL~-~~ 290 (377)
T cd05629 227 QECDWWS----------LGAIMFECLIGWPPFCSENSHE--TYRKIINWRETL---YFPDDIHLSVEAEDLIRRLIT-NA 290 (377)
T ss_pred CceeeEe----------cchhhhhhhcCCCCCCCCCHHH--HHHHHHccCCcc---CCCCCCCCCHHHHHHHHHHhc-CH
Confidence 9999999 7888888888888875322111 000110000000 000111234567889999997 77
Q ss_pred CCC---CCHHHHHHH
Q 040925 809 FER---MDMRDVVAK 820 (833)
Q Consensus 809 ~~R---Pt~~eil~~ 820 (833)
.+| +|+.|+++.
T Consensus 291 ~~r~~r~~~~~~l~h 305 (377)
T cd05629 291 ENRLGRGGAHEIKSH 305 (377)
T ss_pred hhcCCCCCHHHHhcC
Confidence 765 599998875
No 101
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=2.3e-35 Score=322.36 Aligned_cols=269 Identities=23% Similarity=0.334 Sum_probs=203.0
Q ss_pred HHHhcCCccCceeccCcceEEEEEEECC-----CceEEEEEEeeccCC-cchhHHHHHHHHHhhcC-CCccceEeeEeec
Q 040925 527 SKATGEFSSSNMIGQGSFGYVYKGTLGE-----DEMIVAVKVINLKYK-GASRSFVAECEALRNIR-HRNLIKIITICSS 599 (833)
Q Consensus 527 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~ 599 (833)
....++|++.+.||+|+||.||+|++.. .+..||||+++.... ...+.+.+|+++++++. ||||+++++++..
T Consensus 33 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~ 112 (400)
T cd05105 33 EFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTK 112 (400)
T ss_pred eccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc
Confidence 3445689999999999999999998743 245799999975432 23457899999999996 9999999999765
Q ss_pred CCCCCCceEeEEEEecCCCChhhhhccCCCc-------------------------------------------------
Q 040925 600 TDFKGTDFKAFVFEYMENGSLKDWLHQSDDQ------------------------------------------------- 630 (833)
Q Consensus 600 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------------------------------------------------- 630 (833)
.. ..++|||||++|+|.+++......
T Consensus 113 ~~-----~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (400)
T cd05105 113 SG-----PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQ 187 (400)
T ss_pred CC-----ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccc
Confidence 44 799999999999999998653210
Q ss_pred -----------------------------------------cccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCC
Q 040925 631 -----------------------------------------VEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLK 669 (833)
Q Consensus 631 -----------------------------------------~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlk 669 (833)
.....+++.++..++.|++.||+|||+. +|+|||||
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dik 264 (400)
T cd05105 188 YVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLA 264 (400)
T ss_pred cchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCC
Confidence 0012478888999999999999999999 99999999
Q ss_pred CCCeeecCCCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCcc
Q 040925 670 PSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHS 749 (833)
Q Consensus 670 p~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~ 749 (833)
|+||+++.++.+||+|||+++........ .......+++.|+|||++.+..++.++|||| +|++
T Consensus 265 p~Nill~~~~~~kL~DfGla~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwS----------lGvi 328 (400)
T cd05105 265 ARNVLLAQGKIVKICDFGLARDIMHDSNY------VSKGSTFLPVKWMAPESIFDNLYTTLSDVWS----------YGIL 328 (400)
T ss_pred hHhEEEeCCCEEEEEeCCcceeccccccc------cccCCcCCCcceEChhhhcCCCCCchhhHHH----------HHHH
Confidence 99999999999999999999865432211 1112235788999999999888999999999 6777
Q ss_pred HHHHHH-HhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhh
Q 040925 750 LHEFAK-TALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRE 826 (833)
Q Consensus 750 l~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~ 826 (833)
++++++ +..|+.... .+.... ....... ....+..++..+.+++.+||+.||++|||+.+|.+.|+++.+
T Consensus 329 l~ellt~g~~P~~~~~-~~~~~~-~~~~~~~-----~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 329 LWEIFSLGGTPYPGMI-VDSTFY-NKIKSGY-----RMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred HHHHHHCCCCCCcccc-hhHHHH-HHHhcCC-----CCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 777765 555553211 111111 1111100 011123456788999999999999999999999999998754
No 102
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=2.6e-35 Score=306.48 Aligned_cols=255 Identities=23% Similarity=0.398 Sum_probs=200.1
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
.++|++.++||+|++|.||+|... ++..||+|.+.... ...+.+.+|+.++++++|+||+++++++...+ ..+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 77 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEE-----PIY 77 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC-----CcE
Confidence 457999999999999999999976 56779999986432 23567899999999999999999999865443 789
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
++|||+++|+|.+++...... .+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||++
T Consensus 78 lv~e~~~~~~L~~~l~~~~~~----~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~ 150 (261)
T cd05072 78 IITEYMAKGSLLDFLKSDEGG----KVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLA 150 (261)
T ss_pred EEEecCCCCcHHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccc
Confidence 999999999999999764322 678899999999999999999999 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCcccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEIVDP 768 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~~~~ 768 (833)
.......... .....++..|+|||+..+..++.++|||| +|++++++++ +..|+......
T Consensus 151 ~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~s----------lG~~l~~l~t~g~~p~~~~~~~-- 211 (261)
T cd05072 151 RVIEDNEYTA-------REGAKFPIKWTAPEAINFGSFTIKSDVWS----------FGILLYEIVTYGKIPYPGMSNS-- 211 (261)
T ss_pred eecCCCceec-------cCCCccceecCCHHHhccCCCChhhhhhh----------hHHHHHHHHccCCCCCCCCCHH--
Confidence 8764422111 11234677899999998888999999999 7888888887 77776421110
Q ss_pred cchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 040925 769 SLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCH 823 (833)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 823 (833)
.. ...+..... ......++.++.+++.+||..+|++|||++++.+.|+.
T Consensus 212 ~~-~~~~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 212 DV-MSALQRGYR-----MPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred HH-HHHHHcCCC-----CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 11 111111110 01112345678899999999999999999999999875
No 103
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.7e-35 Score=317.49 Aligned_cols=242 Identities=22% Similarity=0.251 Sum_probs=191.9
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCC-CccceEeeEeecCCCCCCce
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRH-RNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~~~~ 607 (833)
+|++.+.||+|+||.||+|++..+++.||||+++... ....+.+..|.++++.++| ++|+++++++...+ .
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~-----~ 75 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD-----R 75 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCC-----E
Confidence 5889999999999999999999899999999997432 2344567889999999976 56888888865544 8
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.|+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~------~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg 146 (324)
T cd05587 76 LYFVMEYVNGGDLMYHIQQVG------KFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFG 146 (324)
T ss_pred EEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecC
Confidence 999999999999999997654 688999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD 767 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~ 767 (833)
+++...... .......||+.|+|||++.+..++.++|||| .|++++++++|..|+......
T Consensus 147 ~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~Diws----------lGvil~elltG~~pf~~~~~~- 207 (324)
T cd05587 147 MCKENIFGG--------KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWA----------FGVLLYEMLAGQPPFDGEDED- 207 (324)
T ss_pred cceecCCCC--------CceeeecCCccccChhhhcCCCCCcccchhh----------hHHHHHHHHhCCCCCCCCCHH-
Confidence 987432111 1112356999999999999999999999999 888999999999887532211
Q ss_pred ccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCH
Q 040925 768 PSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDM 814 (833)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 814 (833)
........... ..+...+..+.+++.+||..||++||++
T Consensus 208 -~~~~~i~~~~~-------~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 208 -ELFQSIMEHNV-------SYPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred -HHHHHHHcCCC-------CCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 11111111110 1112345678899999999999999986
No 104
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=3.5e-35 Score=336.66 Aligned_cols=272 Identities=22% Similarity=0.281 Sum_probs=206.5
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC---cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK---GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
++|++.++||+|+||.||+|++..+++.||+|+++.... ...+++.+|++++++++||||+++++++...+ .
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~-----~ 76 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGD-----P 76 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCC-----E
Confidence 689999999999999999999998999999999974322 22457899999999999999999999976554 8
Q ss_pred EeEEEEecCCCChhhhhccCCCc-----cccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEE
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQ-----VEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH 682 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~-----~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 682 (833)
.++||||++||+|.+++...... ......++..++.++.|+++||+|||+. ||+||||||+||+++.++.+|
T Consensus 77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vK 153 (932)
T PRK13184 77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVV 153 (932)
T ss_pred EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEE
Confidence 89999999999999998742110 0112467788899999999999999999 999999999999999999999
Q ss_pred EcccccccccCccccccc----------ccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHH
Q 040925 683 VCDFGLAKFLSDHQLDTA----------VKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHE 752 (833)
Q Consensus 683 L~DfG~a~~~~~~~~~~~----------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~ 752 (833)
|+|||+++.......... ..........+||+.|||||++.+..++.++|||| .|+++++
T Consensus 154 LiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWS----------LGVILyE 223 (932)
T PRK13184 154 ILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYA----------LGVILYQ 223 (932)
T ss_pred EEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHH----------HHHHHHH
Confidence 999999986622110000 00011112357999999999999999999999999 8889999
Q ss_pred HHHHhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCC-CHHHHHHHHHHhhh
Q 040925 753 FAKTALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERM-DMRDVVAKLCHTRE 826 (833)
Q Consensus 753 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-t~~eil~~L~~i~~ 826 (833)
++++..|+.......... ......+.......++++.+.+++.+|+..||++|| +++++.+.|+...+
T Consensus 224 LLTG~~PF~~~~~~ki~~------~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 224 MLTLSFPYRRKKGRKISY------RDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred HHHCCCCCCCcchhhhhh------hhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 999998875322110000 000001111111234567788999999999999996 57777777777654
No 105
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=3.2e-35 Score=310.25 Aligned_cols=265 Identities=22% Similarity=0.384 Sum_probs=204.9
Q ss_pred cCCccCceeccCcceEEEEEEE-----CCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCC
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTL-----GEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGT 605 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 605 (833)
.+|.+.+.||+|+||.||+|.. ..++..||+|.++.......+.+.+|++++++++||||+++++++...+
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 80 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD---- 80 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC----
Confidence 4789999999999999999985 2356679999987554445667999999999999999999999976544
Q ss_pred ceEeEEEEecCCCChhhhhccCCCc-------cccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCC
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQ-------VEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHD 678 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~-------~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~ 678 (833)
..++||||+++++|.+++...... .....+++.+++.++.|++.||+|||+. |++||||||+||+++++
T Consensus 81 -~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~ 156 (288)
T cd05093 81 -PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGEN 156 (288)
T ss_pred -ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccC
Confidence 789999999999999999754310 1112589999999999999999999999 99999999999999999
Q ss_pred CcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-Hh
Q 040925 679 MVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TA 757 (833)
Q Consensus 679 ~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~ 757 (833)
+.+||+|||+++........ .......+++.|+|||++.+..++.++|||| +|+.++++++ +.
T Consensus 157 ~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~sDiws----------lG~il~~l~t~g~ 220 (288)
T cd05093 157 LLVKIGDFGMSRDVYSTDYY------RVGGHTMLPIRWMPPESIMYRKFTTESDVWS----------LGVVLWEIFTYGK 220 (288)
T ss_pred CcEEeccCCccccccCCcee------ecCCCCCccccccCHHHhccCCCCchhhHHH----------HHHHHHHHHhCCC
Confidence 99999999999865432110 0111234678899999999888999999999 7788888887 66
Q ss_pred CCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhhh
Q 040925 758 LPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRET 827 (833)
Q Consensus 758 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~~ 827 (833)
.|+..... ............. .....++..+.+++.+||+.||.+|||++|+.+.|+.+...
T Consensus 221 ~p~~~~~~--~~~~~~i~~~~~~------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 221 QPWYQLSN--NEVIECITQGRVL------QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred CCCCCCCH--HHHHHHHHcCCcC------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 66542211 1111111111100 01112456789999999999999999999999999998764
No 106
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.8e-35 Score=316.29 Aligned_cols=237 Identities=24% Similarity=0.284 Sum_probs=189.2
Q ss_pred ceeccCcceEEEEEEECCCceEEEEEEeecc---CCcchhHHHHHHHHHhhc-CCCccceEeeEeecCCCCCCceEeEEE
Q 040925 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVINLK---YKGASRSFVAECEALRNI-RHRNLIKIITICSSTDFKGTDFKAFVF 612 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 612 (833)
+.||+|+||.||+|+++.+++.||+|+++.. .....+.+..|.+++..+ +||||+++++++...+ ..|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~-----~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPD-----RLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCC-----EEEEEE
Confidence 4799999999999999989999999999743 223345677888888877 6999999999875544 899999
Q ss_pred EecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccccc
Q 040925 613 EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL 692 (833)
Q Consensus 613 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 692 (833)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 Ey~~~g~L~~~i~~~~------~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~ 146 (320)
T cd05590 76 EFVNGGDLMFHIQKSR------RFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 146 (320)
T ss_pred cCCCCchHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeec
Confidence 9999999999987654 689999999999999999999999 9999999999999999999999999998753
Q ss_pred CcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchh
Q 040925 693 SDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLM 772 (833)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~ 772 (833)
.... .......||+.|+|||++.+..++.++|||| .|+++++++++..|+..... .....
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~Diws----------lG~il~el~~g~~Pf~~~~~--~~~~~ 206 (320)
T cd05590 147 IFNG--------KTTSTFCGTPDYIAPEILQEMLYGPSVDWWA----------MGVLLYEMLCGHAPFEAENE--DDLFE 206 (320)
T ss_pred CcCC--------CcccccccCccccCHHHHcCCCCCCccchhh----------hHHHHHHHhhCCCCCCCCCH--HHHHH
Confidence 2211 1112346999999999999989999999999 88899999999988753221 11111
Q ss_pred hhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCH
Q 040925 773 EVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDM 814 (833)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 814 (833)
....... ..+...+..+.+++.+||+.||++||++
T Consensus 207 ~i~~~~~-------~~~~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 207 AILNDEV-------VYPTWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred HHhcCCC-------CCCCCCCHHHHHHHHHHcccCHHHCCCC
Confidence 1111110 1112245678899999999999999998
No 107
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.4e-35 Score=314.77 Aligned_cols=242 Identities=22% Similarity=0.292 Sum_probs=189.2
Q ss_pred ceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhc-CCCccceEeeEeecCCCCCCceEeEEE
Q 040925 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNI-RHRNLIKIITICSSTDFKGTDFKAFVF 612 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 612 (833)
+.||+|+||.||+|++..+++.||+|+++... ....+....|..++... +||||+++++++...+ ..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~-----~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKE-----HLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCC-----EEEEEE
Confidence 47999999999999999999999999997432 22334556677777654 7999999999865544 899999
Q ss_pred EecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccccc
Q 040925 613 EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL 692 (833)
Q Consensus 613 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 692 (833)
||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~gg~L~~~~~~~~------~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~ 146 (316)
T cd05592 76 EYLNGGDLMFHIQSSG------RFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKEN 146 (316)
T ss_pred cCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeEC
Confidence 9999999999997654 689999999999999999999999 9999999999999999999999999999754
Q ss_pred CcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchh
Q 040925 693 SDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLM 772 (833)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~ 772 (833)
.... .......||+.|+|||++.+..++.++|||| .|+++++++++..|+..... .....
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws----------lG~il~ell~G~~Pf~~~~~--~~~~~ 206 (316)
T cd05592 147 MNGE--------GKASTFCGTPDYIAPEILKGQKYNESVDWWS----------FGVLLYEMLIGQSPFHGEDE--DELFD 206 (316)
T ss_pred CCCC--------CccccccCCccccCHHHHcCCCCCCcccchh----------HHHHHHHHHhCCCCCCCCCH--HHHHH
Confidence 3211 1122356999999999999989999999999 88899999999888753221 11111
Q ss_pred hhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHH-HHHH
Q 040925 773 EVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMR-DVVA 819 (833)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~-eil~ 819 (833)
... ... ...+..++..+.+++.+||..||++||++. ++++
T Consensus 207 ~i~-~~~------~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 207 SIL-NDR------PHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred HHH-cCC------CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 111 100 011122455678999999999999999875 4543
No 108
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=2.3e-35 Score=324.08 Aligned_cols=259 Identities=19% Similarity=0.250 Sum_probs=195.5
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceE
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
+|++.+.||+|+||.||+|++..+++.||+|++.... ......+.+|++++++++||||+++++++...+ ..
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~-----~~ 76 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD-----NL 76 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCC-----EE
Confidence 5889999999999999999999999999999996432 223457889999999999999999999976554 89
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
++||||+++|+|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 77 ~lv~E~~~gg~L~~~l~~~~------~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGl 147 (382)
T cd05625 77 YFVMDYIPGGDMMSLLIRMG------IFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGL 147 (382)
T ss_pred EEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCC
Confidence 99999999999999997654 688999999999999999999999 999999999999999999999999999
Q ss_pred ccccCcccccc---------------------------------------cccCCCccccccccccccCccccCCCCCCc
Q 040925 689 AKFLSDHQLDT---------------------------------------AVKTPSSSIGLKGTVGYVAPEYGMGSEASM 729 (833)
Q Consensus 689 a~~~~~~~~~~---------------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 729 (833)
|.......... ...........+||+.|+|||++.+..++.
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 227 (382)
T cd05625 148 CTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 227 (382)
T ss_pred CccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCC
Confidence 85432100000 000001112357999999999999999999
Q ss_pred ccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCC
Q 040925 730 TGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPF 809 (833)
Q Consensus 730 ~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 809 (833)
++|||| .|+++++++++..|+......... .......... ..+.....++...+++.+|+ .+|+
T Consensus 228 ~~DiwS----------lGvil~elltG~~Pf~~~~~~~~~--~~i~~~~~~~---~~p~~~~~s~~~~~li~~l~-~~p~ 291 (382)
T cd05625 228 LCDWWS----------VGVILYEMLVGQPPFLAQTPLETQ--MKVINWQTSL---HIPPQAKLSPEASDLIIKLC-RGPE 291 (382)
T ss_pred eeeEEe----------chHHHHHHHhCCCCCCCCCHHHHH--HHHHccCCCc---CCCCcccCCHHHHHHHHHHc-cCHh
Confidence 999999 888999999999987633211111 1111100000 00111123445667776665 5999
Q ss_pred CCCC---HHHHHHH
Q 040925 810 ERMD---MRDVVAK 820 (833)
Q Consensus 810 ~RPt---~~eil~~ 820 (833)
+|++ ++|++++
T Consensus 292 ~R~~~~~~~ei~~h 305 (382)
T cd05625 292 DRLGKNGADEIKAH 305 (382)
T ss_pred HcCCCCCHHHHhcC
Confidence 9997 8887654
No 109
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-35 Score=312.94 Aligned_cols=247 Identities=23% Similarity=0.317 Sum_probs=202.8
Q ss_pred ceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEEEecC
Q 040925 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYME 616 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~ 616 (833)
-+||+|.||+||-|++..++..+|||.+........+-+.+|+...++++|.|||+++|.+...+ +.-+.||-++
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senG-----f~kIFMEqVP 655 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENG-----FFKIFMEQVP 655 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCC-----eEEEEeecCC
Confidence 37999999999999999999999999998777667778999999999999999999999965544 8889999999
Q ss_pred CCChhhhhccCCCccccccC--CHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeec-CCCcEEEcccccccccC
Q 040925 617 NGSLKDWLHQSDDQVEVCKL--SLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLD-HDMVAHVCDFGLAKFLS 693 (833)
Q Consensus 617 ~gsL~~~l~~~~~~~~~~~l--~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kL~DfG~a~~~~ 693 (833)
||+|.+++...=+ ++ .+.+.-.+.+||++||.|||+. .|||||||-+|+|++ -.|.+||+|||-++...
T Consensus 656 GGSLSsLLrskWG-----PlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA 727 (1226)
T KOG4279|consen 656 GGSLSSLLRSKWG-----PLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA 727 (1226)
T ss_pred CCcHHHHHHhccC-----CCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhc
Confidence 9999999976432 44 6788889999999999999999 999999999999996 57899999999988654
Q ss_pred cccccccccCCCccccccccccccCccccCCC--CCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccch
Q 040925 694 DHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS--EASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLL 771 (833)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~ 771 (833)
.-. ..+..+.||..|||||++-.+ .|..++|||| +|+++.||++|..|+.........+.
T Consensus 728 gin--------P~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS----------~GCT~vEMATGrPPF~ElgspqAAMF 789 (1226)
T KOG4279|consen 728 GIN--------PCTETFTGTLQYMAPEVIDQGPRGYGKAADIWS----------FGCTMVEMATGRPPFVELGSPQAAMF 789 (1226)
T ss_pred cCC--------ccccccccchhhhChHhhccCCcCCCchhhhhh----------ccceeEeeccCCCCeeecCChhHhhh
Confidence 321 122346799999999998654 4899999999 78888899999998764333333333
Q ss_pred hhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 772 MEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.-.+.+.. .+.+++...+...+|.+|+.+||.+||++.+++..
T Consensus 790 kVGmyKvH------P~iPeelsaeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 790 KVGMYKVH------PPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred hhcceecC------CCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence 33333222 23456677888999999999999999999999764
No 110
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-35 Score=312.21 Aligned_cols=253 Identities=23% Similarity=0.269 Sum_probs=207.7
Q ss_pred HhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCc---chhHHHHHHHHHhhcC-CCccceEeeEeecCCCCC
Q 040925 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG---ASRSFVAECEALRNIR-HRNLIKIITICSSTDFKG 604 (833)
Q Consensus 529 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 604 (833)
....|++.+.||+|.||.||+|+.+.+|+.+|+|++...... ....+.+|+.+|+++. |||||.+++++.+..
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~--- 109 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPD--- 109 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCC---
Confidence 345789999999999999999999999999999999755332 3468999999999998 999999999966555
Q ss_pred CceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCC----Cc
Q 040925 605 TDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHD----MV 680 (833)
Q Consensus 605 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~----~~ 680 (833)
..++|||++.||.|.+.+... .+++..+..++.|++.|++|||+. ||+|||+||+|+|+... +.
T Consensus 110 --~~~lvmEL~~GGeLfd~i~~~-------~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ 177 (382)
T KOG0032|consen 110 --SVYLVMELCEGGELFDRIVKK-------HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGR 177 (382)
T ss_pred --eEEEEEEecCCchHHHHHHHc-------cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCc
Confidence 999999999999999999864 289999999999999999999999 99999999999999643 58
Q ss_pred EEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCC
Q 040925 681 AHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPE 760 (833)
Q Consensus 681 ~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~ 760 (833)
+|++|||+|...... ......+||+.|+|||++.+..|+..+|||| .|++.|.++.|..|+
T Consensus 178 ik~~DFGla~~~~~~---------~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS----------~Gvi~yiLL~G~~PF 238 (382)
T KOG0032|consen 178 IKLIDFGLAKFIKPG---------ERLHTIVGTPEYVAPEVLGGRPYGDEVDVWS----------IGVILYILLSGVPPF 238 (382)
T ss_pred EEEeeCCCceEccCC---------ceEeeecCCccccCchhhcCCCCCcccchhH----------HHHHHHHHhhCCCCC
Confidence 999999999876552 2233578999999999999999999999999 888888888888887
Q ss_pred cccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 761 KVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
........ ......... .......+.......+++..|+..||.+|+|+.+++++
T Consensus 239 ~~~~~~~~--~~~i~~~~~---~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 239 WGETEFEI--FLAILRGDF---DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred cCCChhHH--HHHHHcCCC---CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 63331111 111111211 11223345567788999999999999999999999985
No 111
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3.3e-35 Score=316.73 Aligned_cols=251 Identities=19% Similarity=0.229 Sum_probs=194.1
Q ss_pred CCccCceeccCcceEEEEEEEC---CCceEEEEEEeeccC----CcchhHHHHHHHHHhhcC-CCccceEeeEeecCCCC
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLG---EDEMIVAVKVINLKY----KGASRSFVAECEALRNIR-HRNLIKIITICSSTDFK 603 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~ 603 (833)
+|++.+.||+|+||.||+|+.. .+++.||+|+++... ....+.+.+|+.++++++ ||+|+++++++...+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-- 78 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEA-- 78 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCC--
Confidence 5889999999999999999874 468899999996421 223456788999999994 999999998865444
Q ss_pred CCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEE
Q 040925 604 GTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683 (833)
Q Consensus 604 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 683 (833)
..++||||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 79 ---~~~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl 146 (332)
T cd05614 79 ---KLHLILDYVSGGEMFTHLYQRD------NFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVL 146 (332)
T ss_pred ---EEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEE
Confidence 8899999999999999997654 689999999999999999999999 9999999999999999999999
Q ss_pred cccccccccCcccccccccCCCccccccccccccCccccCCC-CCCcccccccCCcCCCccccCCccHHHHHHHhCCCcc
Q 040925 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS-EASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKV 762 (833)
Q Consensus 684 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~ 762 (833)
+|||+++....... .......||+.|+|||++.+. .++.++|||| +|+++++++++..|+..
T Consensus 147 ~DfG~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diws----------lG~il~elltg~~pf~~ 209 (332)
T cd05614 147 TDFGLSKEFLSEEK-------ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWS----------LGILIFELLTGASPFTL 209 (332)
T ss_pred eeCcCCccccccCC-------CccccccCCccccCHHHhcCCCCCCCcccccc----------chhhhhhhhcCCCCCCC
Confidence 99999976533211 112235699999999998765 4788999999 78888888888888752
Q ss_pred ccccc-c-cchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCC-----CHHHHHHH
Q 040925 763 MEIVD-P-SLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERM-----DMRDVVAK 820 (833)
Q Consensus 763 ~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~ 820 (833)
..... . .......... ...+...+..+.+++.+||+.||++|| +++++++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 210 EGERNTQSEVSRRILKCD-------PPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred CCCCCCHHHHHHHHhcCC-------CCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 21111 0 1101111100 111223456788999999999999999 67787754
No 112
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=3.1e-35 Score=315.14 Aligned_cols=244 Identities=21% Similarity=0.262 Sum_probs=192.3
Q ss_pred CceeccCcceEEEEEEEC---CCceEEEEEEeeccC----CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceE
Q 040925 536 SNMIGQGSFGYVYKGTLG---EDEMIVAVKVINLKY----KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 536 ~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
.+.||+|+||.||+|+.. .+++.||+|+++... ......+.+|+++++.++||||+++++++...+ ..
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~-----~~ 75 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGG-----KL 75 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCC-----eE
Confidence 368999999999999873 468899999997431 122346788999999999999999999875544 89
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
|+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 146 (323)
T cd05584 76 YLILEYLSGGELFMHLEREG------IFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGL 146 (323)
T ss_pred EEEEeCCCCchHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcC
Confidence 99999999999999997654 578889999999999999999999 999999999999999999999999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccc
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDP 768 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~ 768 (833)
++...... .......||+.|+|||++.+..++.++|||| +|+++++++++..|+...+..
T Consensus 147 ~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~Diws----------lG~il~ell~G~~pf~~~~~~-- 206 (323)
T cd05584 147 CKESIHEG--------TVTHTFCGTIEYMAPEILMRSGHGKAVDWWS----------LGALMYDMLTGAPPFTAENRK-- 206 (323)
T ss_pred CeecccCC--------CcccccCCCccccChhhccCCCCCCcceecc----------cHHHHHHHhcCCCCCCCCCHH--
Confidence 87432211 1112346999999999999888999999999 888899999998887532211
Q ss_pred cchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCC-----CHHHHHHH
Q 040925 769 SLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERM-----DMRDVVAK 820 (833)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~ 820 (833)
........... ..+...++.+.+++.+||+.||++|| +++++++.
T Consensus 207 ~~~~~~~~~~~-------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 207 KTIDKILKGKL-------NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred HHHHHHHcCCC-------CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 11111111111 11223456788999999999999999 78888764
No 113
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-36 Score=309.01 Aligned_cols=265 Identities=20% Similarity=0.304 Sum_probs=204.6
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcc-hhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGA-SRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
....+.++||+|.||+|.++... .+.+||||.++...... ..+|.+|+++|.+++|||||+++|+|..++ .++
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~De-----Pic 611 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDD-----PLC 611 (807)
T ss_pred hheehhhhhcCcccceeEEEEec-CceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCC-----chH
Confidence 34567899999999999999986 47999999998765544 478999999999999999999999998776 789
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+|||||++|+|.+++.++... ........+|+.||+.|++||.+. ++||||+.+.|+|+|.++++||+|||++
T Consensus 612 mI~EYmEnGDLnqFl~aheap----t~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgms 684 (807)
T KOG1094|consen 612 MITEYMENGDLNQFLSAHELP----TAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMS 684 (807)
T ss_pred HHHHHHhcCcHHHHHHhccCc----ccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccc
Confidence 999999999999999987532 345566778999999999999999 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPS 769 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~ 769 (833)
+-.-........ ...+-..+|||||.+.-+++++++|+|+ +|+++||++.........+.-|..
T Consensus 685 R~lysg~yy~vq------gr~vlpiRwmawEsillgkFttaSDvWa----------fgvTlwE~~~~C~e~Py~~lt~e~ 748 (807)
T KOG1094|consen 685 RNLYSGDYYRVQ------GRAVLPIRWMAWESILLGKFTTASDVWA----------FGVTLWEVFMLCREQPYSQLTDEQ 748 (807)
T ss_pred cccccCCceeee------cceeeeeeehhHHHHHhccccchhhhhh----------hHHHHHHHHHHHhhCchhhhhHHH
Confidence 855433221111 1134567999999999999999999999 666777766654433322322222
Q ss_pred chhhhccc-cchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 040925 770 LLMEVMTN-NSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHT 824 (833)
Q Consensus 770 ~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i 824 (833)
...+...- .......-...+.-|+..+.++|.+||.+|-++|||++++...|.+.
T Consensus 749 vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 749 VVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred HHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 22111000 00000011123445788999999999999999999999999988764
No 114
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.9e-35 Score=322.03 Aligned_cols=255 Identities=18% Similarity=0.240 Sum_probs=199.5
Q ss_pred HhcCCccCceeccCcceEEEEEEECCCceEEEEEEeecc---CCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCC
Q 040925 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK---YKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGT 605 (833)
Q Consensus 529 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 605 (833)
..++|++.+.||+|+||.||+|++..+++.||+|+++.. .....+.+.+|+.+++.++||||+++++++....
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~---- 116 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDK---- 116 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCC----
Confidence 456899999999999999999999999999999999642 1223345788999999999999999999865544
Q ss_pred ceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcc
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 685 (833)
..++||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 117 -~~~lv~Ey~~gg~L~~~l~~~-------~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~D 185 (370)
T cd05596 117 -YLYMVMEYMPGGDLVNLMSNY-------DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLAD 185 (370)
T ss_pred -EEEEEEcCCCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEe
Confidence 899999999999999998653 478889999999999999999999 999999999999999999999999
Q ss_pred cccccccCcccccccccCCCccccccccccccCccccCCC----CCCcccccccCCcCCCccccCCccHHHHHHHhCCCc
Q 040925 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS----EASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEK 761 (833)
Q Consensus 686 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~ 761 (833)
||++........ .......||+.|+|||++.+. .++.++|||| +|+++|+++++..|+.
T Consensus 186 fG~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwS----------lGvilyelltG~~Pf~ 248 (370)
T cd05596 186 FGTCMKMDANGM-------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWS----------VGVFLYEMLVGDTPFY 248 (370)
T ss_pred ccceeeccCCCc-------ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeee----------hhHHHHHHHhCCCCcC
Confidence 999976543211 011234699999999987653 4789999999 8889999999998876
Q ss_pred ccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCC--CCCHHHHHHH
Q 040925 762 VMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFE--RMDMRDVVAK 820 (833)
Q Consensus 762 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~eil~~ 820 (833)
..... ............. ..+....++..+.+++.+|+..+|++ |||++|+++.
T Consensus 249 ~~~~~--~~~~~i~~~~~~~---~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 249 ADSLV--GTYSKIMDHKNSL---TFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred CCCHH--HHHHHHHcCCCcC---CCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 32211 1111111110000 00111124567889999999999988 9999999765
No 115
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=3.6e-35 Score=309.15 Aligned_cols=252 Identities=23% Similarity=0.275 Sum_probs=199.0
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC---cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceE
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK---GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
.|++.+.||+|+||.||+|.+..+++.||+|++..... .....+.+|++++++++||||+++++++...+ ..
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~ 75 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD-----AL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCC-----eE
Confidence 48889999999999999999988999999999864321 22345778999999999999999999865443 89
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
++||||+++|+|.+++...... .+++..+..++.|++.||.|||+. +|+||||||+||++++++.++|+|||+
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~ 148 (285)
T cd05605 76 CLVLTLMNGGDLKFHIYNMGNP----GFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGL 148 (285)
T ss_pred EEEEeccCCCcHHHHHHhcCcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCC
Confidence 9999999999999888654321 689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccc
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDP 768 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~ 768 (833)
+........ .....||+.|+|||++.+..++.++|||| .|+++|+++++..|+........
T Consensus 149 ~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Diws----------~G~~l~el~~g~~pf~~~~~~~~ 209 (285)
T cd05605 149 AVEIPEGET---------IRGRVGTVGYMAPEVVKNERYTFSPDWWG----------LGCLIYEMIEGKSPFRQRKEKVK 209 (285)
T ss_pred ceecCCCCc---------cccccCCCCccCcHHhcCCCCCccccchh----------HHHHHHHHHHCCCCCCCCchhhH
Confidence 976533211 11246899999999999889999999999 78889999999888753221100
Q ss_pred -cchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCC-----CHHHHHHH
Q 040925 769 -SLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERM-----DMRDVVAK 820 (833)
Q Consensus 769 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~ 820 (833)
......+. ......+..++..+.+++.+||..||++|| +++++++.
T Consensus 210 ~~~~~~~~~------~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 210 REEVERRVK------EDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred HHHHHHHhh------hcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 00000000 001112234567789999999999999999 88888664
No 116
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.5e-35 Score=315.69 Aligned_cols=243 Identities=22% Similarity=0.277 Sum_probs=192.4
Q ss_pred ceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhc-CCCccceEeeEeecCCCCCCceEeEEE
Q 040925 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNI-RHRNLIKIITICSSTDFKGTDFKAFVF 612 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 612 (833)
+.||+|+||.||+|++..+++.||+|+++... ....+.+..|.++++.+ +||||+++++++...+ ..|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~-----~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKD-----RLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC-----eEEEEE
Confidence 46999999999999999899999999997432 23345677889998876 7999999999976554 899999
Q ss_pred EecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccccc
Q 040925 613 EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL 692 (833)
Q Consensus 613 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 692 (833)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 E~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~ 146 (321)
T cd05591 76 EYVNGGDLMFQIQRSR------KFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEG 146 (321)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceec
Confidence 9999999999987654 688999999999999999999999 9999999999999999999999999998753
Q ss_pred CcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchh
Q 040925 693 SDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLM 772 (833)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~ 772 (833)
..... ......||+.|+|||++.+..++.++|||| +|+++++++++..|+..... .....
T Consensus 147 ~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws----------lG~il~el~tg~~Pf~~~~~--~~~~~ 206 (321)
T cd05591 147 ILNGV--------TTTTFCGTPDYIAPEILQELEYGPSVDWWA----------LGVLMYEMMAGQPPFEADNE--DDLFE 206 (321)
T ss_pred ccCCc--------cccccccCccccCHHHHcCCCCCCccceec----------hhHHHHHHhcCCCCCCCCCH--HHHHH
Confidence 32111 112356999999999999989999999999 88889999999888753221 11111
Q ss_pred hhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCC-------CHHHHHHH
Q 040925 773 EVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERM-------DMRDVVAK 820 (833)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-------t~~eil~~ 820 (833)
....... ..+..++..+.+++.+||+.||++|| +++++++.
T Consensus 207 ~i~~~~~-------~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 207 SILHDDV-------LYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred HHHcCCC-------CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 1111110 11122356788999999999999999 77777654
No 117
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.6e-35 Score=318.77 Aligned_cols=254 Identities=20% Similarity=0.219 Sum_probs=194.7
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.+++.++||||+++++++...+ .
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~-----~ 75 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKD-----N 75 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCC-----e
Confidence 47999999999999999999999999999999997542 223456889999999999999999999865544 8
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.++||||+++|+|.+++..... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg 147 (330)
T cd05601 76 LYLVMEYQPGGDLLSLLNRYED-----QFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFG 147 (330)
T ss_pred EEEEECCCCCCCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCC
Confidence 9999999999999999987532 689999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccC------CCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGM------GSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEK 761 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~ 761 (833)
++......... ......||+.|+|||++. +..++.++|||| +|+++++++++..|+.
T Consensus 148 ~a~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Diws----------lG~il~el~~g~~Pf~ 210 (330)
T cd05601 148 SAARLTANKMV-------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWS----------LGVIAYEMIYGRSPFH 210 (330)
T ss_pred CCeECCCCCce-------eeecccCCccccCHHHhccccccccCCCCCcceeec----------ccceeeeeccCCCCCC
Confidence 99866432211 111246899999999876 456789999999 5666666666766664
Q ss_pred ccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 762 VMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 762 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
..... .............. .+.....+..+.+++..|+. +|++|||++++++.
T Consensus 211 ~~~~~--~~~~~i~~~~~~~~---~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 211 EGTSA--KTYNNIMNFQRFLK---FPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred CCCHH--HHHHHHHcCCCccC---CCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 22110 00011111000000 00111235567889999997 99999999999864
No 118
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.4e-35 Score=333.07 Aligned_cols=265 Identities=20% Similarity=0.222 Sum_probs=205.8
Q ss_pred HHHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC--CcchhHHHHHHHHHhhcCCCccceEeeEeecCCC--
Q 040925 527 SKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVAECEALRNIRHRNLIKIITICSSTDF-- 602 (833)
Q Consensus 527 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-- 602 (833)
....++|++.+.||+|+||+||+|++..+++.||||+++... ......+.+|+.++..++|+||+++++.+...+.
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 344579999999999999999999999899999999997542 2234568889999999999999999877644321
Q ss_pred -CCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcE
Q 040925 603 -KGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVA 681 (833)
Q Consensus 603 -~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 681 (833)
......++||||+++|+|.+++...... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~--~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~v 182 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKT--NRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLV 182 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCE
Confidence 1112468999999999999999754321 12689999999999999999999999 99999999999999999999
Q ss_pred EEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCc
Q 040925 682 HVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEK 761 (833)
Q Consensus 682 kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~ 761 (833)
||+|||+++........ .......||+.|+|||++.+..++.++|||| +|+++|+++++..|+.
T Consensus 183 kL~DFGls~~~~~~~~~------~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwS----------lGvilyeLltG~~Pf~ 246 (496)
T PTZ00283 183 KLGDFGFSKMYAATVSD------DVGRTFCGTPYYVAPEIWRRKPYSKKADMFS----------LGVLLYELLTLKRPFD 246 (496)
T ss_pred EEEecccCeeccccccc------cccccccCCcceeCHHHhCCCCCCcHHHHHH----------HHHHHHHHHHCCCCCC
Confidence 99999999865432111 1122356999999999999999999999999 8888999999988875
Q ss_pred ccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 762 VMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 762 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
..... .......... ....+..+++.+.+++.+||+.||++||++.++++.
T Consensus 247 ~~~~~--~~~~~~~~~~------~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 247 GENME--EVMHKTLAGR------YDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CCCHH--HHHHHHhcCC------CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 32110 1111111110 011223456778999999999999999999999864
No 119
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.6e-35 Score=320.37 Aligned_cols=258 Identities=18% Similarity=0.246 Sum_probs=198.7
Q ss_pred HHHHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeecc---CCcchhHHHHHHHHHhhcCCCccceEeeEeecCCC
Q 040925 526 LSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK---YKGASRSFVAECEALRNIRHRNLIKIITICSSTDF 602 (833)
Q Consensus 526 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 602 (833)
+....++|++.+.||+|+||.||+|++..+++.||+|+++.. .....+.+.+|+.+++.++||||+++++++....
T Consensus 38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~- 116 (370)
T cd05621 38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDK- 116 (370)
T ss_pred cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC-
Confidence 334457899999999999999999999999999999998642 1223456789999999999999999999976544
Q ss_pred CCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEE
Q 040925 603 KGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH 682 (833)
Q Consensus 603 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 682 (833)
..|+||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+|
T Consensus 117 ----~~~lv~Ey~~gg~L~~~l~~~-------~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~k 182 (370)
T cd05621 117 ----YLYMVMEYMPGGDLVNLMSNY-------DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLK 182 (370)
T ss_pred ----EEEEEEcCCCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEE
Confidence 899999999999999999653 478899999999999999999999 999999999999999999999
Q ss_pred EcccccccccCcccccccccCCCccccccccccccCccccCCCC----CCcccccccCCcCCCccccCCccHHHHHHHhC
Q 040925 683 VCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSE----ASMTGDIFTGRRPIDAVFNEGHSLHEFAKTAL 758 (833)
Q Consensus 683 L~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~ 758 (833)
|+|||+|........ .......||+.|||||++.+.. ++.++|||| .|+++|++++|..
T Consensus 183 L~DFG~a~~~~~~~~-------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwS----------lG~ilyell~G~~ 245 (370)
T cd05621 183 LADFGTCMKMDETGM-------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWS----------VGVFLFEMLVGDT 245 (370)
T ss_pred EEecccceecccCCc-------eecccCCCCcccCCHHHHhccCCCCCCCcccCEEe----------ehHHHHHHHhCCC
Confidence 999999986543211 1112356999999999986543 788999999 8899999999999
Q ss_pred CCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCC--CCCHHHHHHH
Q 040925 759 PEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFE--RMDMRDVVAK 820 (833)
Q Consensus 759 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~eil~~ 820 (833)
|+...... ............. ..+.....++.+.+++..|+..+|.+ |||++|+++.
T Consensus 246 Pf~~~~~~--~~~~~i~~~~~~~---~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 246 PFYADSLV--GTYSKIMDHKNSL---NFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred CCCCCCHH--HHHHHHHhCCccc---CCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 87632211 1111111110000 00111234566788888899755543 8899999876
No 120
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-36 Score=311.12 Aligned_cols=264 Identities=23% Similarity=0.399 Sum_probs=212.7
Q ss_pred HHHHHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCC
Q 040925 525 ELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKG 604 (833)
Q Consensus 525 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 604 (833)
+++-...+....++||-|.||.||.|.|+...-.||||.++.. ....++|.+|+.+|+.++|||+|+++|+|....
T Consensus 261 kWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~Ep--- 336 (1157)
T KOG4278|consen 261 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEP--- 336 (1157)
T ss_pred hhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCC---
Confidence 3333444566778999999999999999999999999999743 445789999999999999999999999998766
Q ss_pred CceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEc
Q 040925 605 TDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVC 684 (833)
Q Consensus 605 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 684 (833)
-+|||+|||..|+|.+|+.+..+. .++.-..+.++.||+.|+.||..+ ++|||||..+|.|++++..||++
T Consensus 337 --PFYIiTEfM~yGNLLdYLRecnr~----ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvA 407 (1157)
T KOG4278|consen 337 --PFYIITEFMCYGNLLDYLRECNRS----EVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVA 407 (1157)
T ss_pred --CeEEEEecccCccHHHHHHHhchh----hcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEee
Confidence 789999999999999999887643 577788899999999999999999 99999999999999999999999
Q ss_pred ccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhC-CCccc
Q 040925 685 DFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTAL-PEKVM 763 (833)
Q Consensus 685 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~-p~~~~ 763 (833)
|||+++.+..+.+.... +..-...|.|||-+....++.|+|||+ +|+.+||+++-.. |+.
T Consensus 408 DFGLsRlMtgDTYTAHA-------GAKFPIKWTAPEsLAyNtFSiKSDVWA----------FGVLLWEIATYGMsPYP-- 468 (1157)
T KOG4278|consen 408 DFGLSRLMTGDTYTAHA-------GAKFPIKWTAPESLAYNTFSIKSDVWA----------FGVLLWEIATYGMSPYP-- 468 (1157)
T ss_pred ccchhhhhcCCceeccc-------CccCcccccCcccccccccccchhhHH----------HHHHHHHHHhcCCCCCC--
Confidence 99999999876554322 122456899999999999999999999 5556666655322 221
Q ss_pred ccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhh
Q 040925 764 EIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRE 826 (833)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~ 826 (833)
.+|.....+...+.+ ....++.|++.+.++|..||+++|.+||++.||.+.++.+..
T Consensus 469 -GidlSqVY~LLEkgy-----RM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~ 525 (1157)
T KOG4278|consen 469 -GIDLSQVYGLLEKGY-----RMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS 525 (1157)
T ss_pred -CccHHHHHHHHhccc-----cccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence 122222222222211 122356789999999999999999999999999999998864
No 121
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=3.4e-35 Score=309.02 Aligned_cols=261 Identities=26% Similarity=0.425 Sum_probs=201.9
Q ss_pred hcCCccCceeccCcceEEEEEEECC-----CceEEEEEEeeccCCc-chhHHHHHHHHHhhcCCCccceEeeEeecCCCC
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGE-----DEMIVAVKVINLKYKG-ASRSFVAECEALRNIRHRNLIKIITICSSTDFK 603 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 603 (833)
.++|.+.+.||+|+||.||+|+... +++.||||.++..... ..+.+.+|++++++++||||+++++++....
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-- 81 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGD-- 81 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCC--
Confidence 3568899999999999999998743 3678999999755443 4568999999999999999999999976554
Q ss_pred CCceEeEEEEecCCCChhhhhccCCC--------ccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeee
Q 040925 604 GTDFKAFVFEYMENGSLKDWLHQSDD--------QVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLL 675 (833)
Q Consensus 604 ~~~~~~lv~e~~~~gsL~~~l~~~~~--------~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll 675 (833)
..++||||+++|+|.+++...+. ......+++.++..++.|++.|++|||+. +++||||||+||++
T Consensus 82 ---~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili 155 (280)
T cd05049 82 ---PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLV 155 (280)
T ss_pred ---CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEE
Confidence 79999999999999999976532 11123578999999999999999999999 99999999999999
Q ss_pred cCCCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH
Q 040925 676 DHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK 755 (833)
Q Consensus 676 ~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~ 755 (833)
+.++.+||+|||.++........ .......+++.|+|||++.+..++.++|||| +|++++++++
T Consensus 156 ~~~~~~kl~d~g~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s----------lG~il~e~~~ 219 (280)
T cd05049 156 GYDLVVKIGDFGMSRDVYTTDYY------RVGGHTMLPIRWMPPESIMYRKFTTESDVWS----------FGVVLWEIFT 219 (280)
T ss_pred cCCCeEEECCcccceecccCcce------ecCCCCcccceecChhhhccCCcchhhhHHH----------HHHHHHHHHh
Confidence 99999999999999754332110 0111234678999999999999999999999 7777888887
Q ss_pred -HhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 040925 756 -TALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLC 822 (833)
Q Consensus 756 -~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 822 (833)
+..|+..... .... +...... ....+..++..+.+++.+||..||++|||++||++.|+
T Consensus 220 ~g~~p~~~~~~--~~~~-~~~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 220 YGKQPWYGLSN--EEVI-ECITQGR-----LLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred cCCCCCCCCCH--HHHH-HHHHcCC-----cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 7766542111 1111 1111100 01112235677899999999999999999999999885
No 122
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=3.2e-35 Score=316.22 Aligned_cols=267 Identities=21% Similarity=0.330 Sum_probs=201.9
Q ss_pred hcCCccCceeccCcceEEEEEEECC-----CceEEEEEEeeccCC-cchhHHHHHHHHHhhc-CCCccceEeeEeecCCC
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGE-----DEMIVAVKVINLKYK-GASRSFVAECEALRNI-RHRNLIKIITICSSTDF 602 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 602 (833)
.++|++.+.||+|+||.||+|...+ +++.||+|+++.... ...+.+.+|+.+++++ +||||++++++|...+
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~- 84 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPG- 84 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC-
Confidence 3579999999999999999997533 457899999874322 2235678899999999 7999999999875433
Q ss_pred CCCceEeEEEEecCCCChhhhhccCCCc----------------------------------------------------
Q 040925 603 KGTDFKAFVFEYMENGSLKDWLHQSDDQ---------------------------------------------------- 630 (833)
Q Consensus 603 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~---------------------------------------------------- 630 (833)
...+++|||+++|+|.+++......
T Consensus 85 ---~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (337)
T cd05054 85 ---GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEE 161 (337)
T ss_pred ---CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchh
Confidence 4788999999999999998643210
Q ss_pred ---cccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccCcccccccccCCCcc
Q 040925 631 ---VEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSS 707 (833)
Q Consensus 631 ---~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~ 707 (833)
.....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.+....... ..
T Consensus 162 ~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~------~~ 232 (337)
T cd05054 162 GDELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV------RK 232 (337)
T ss_pred hhHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchh------hc
Confidence 0012688999999999999999999999 99999999999999999999999999998764322111 01
Q ss_pred ccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCcccccccccchhhhccccchhhhhhh
Q 040925 708 IGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEIVDPSLLMEVMTNNSMIQEDKR 786 (833)
Q Consensus 708 ~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (833)
....++..|+|||++.+..++.++|||| +|++++++++ +..|+.... .+.... ....... ..
T Consensus 233 ~~~~~~~~y~aPE~~~~~~~~~~~Di~S----------lGv~l~el~t~g~~p~~~~~-~~~~~~-~~~~~~~-----~~ 295 (337)
T cd05054 233 GDARLPLKWMAPESIFDKVYTTQSDVWS----------FGVLLWEIFSLGASPYPGVQ-IDEEFC-RRLKEGT-----RM 295 (337)
T ss_pred cCCCCCccccCcHHhcCCCCCccccHHH----------HHHHHHHHHHcCCCCCCCCC-ccHHHH-HHHhccC-----CC
Confidence 1234677899999999999999999999 7788888876 766654211 111111 1111100 00
Q ss_pred hchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhh
Q 040925 787 VKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRE 826 (833)
Q Consensus 787 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~ 826 (833)
..+..+...+.+++.+||+.+|++||++.|+++.|+.+.+
T Consensus 296 ~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 296 RAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1122345678999999999999999999999999998765
No 123
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=2.6e-35 Score=314.56 Aligned_cols=241 Identities=21% Similarity=0.267 Sum_probs=190.0
Q ss_pred ceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhc-CCCccceEeeEeecCCCCCCceEeEEE
Q 040925 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNI-RHRNLIKIITICSSTDFKGTDFKAFVF 612 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 612 (833)
+.||+|+||.||+|++..+++.||+|.++... .........|.+++... +||+|+++++++...+ ..|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~-----~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKE-----HLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCC-----EEEEEE
Confidence 47999999999999999999999999997532 23345667788888765 8999999999976544 899999
Q ss_pred EecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccccc
Q 040925 613 EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL 692 (833)
Q Consensus 613 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 692 (833)
||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 E~~~~g~L~~~i~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05620 76 EFLNGGDLMFHIQDKG------RFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKEN 146 (316)
T ss_pred CCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeec
Confidence 9999999999987654 688999999999999999999999 9999999999999999999999999998743
Q ss_pred CcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchh
Q 040925 693 SDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLM 772 (833)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~ 772 (833)
.... .......||+.|+|||++.+..++.++|||| .|+++++++++..|+...+. ... .
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~Diws----------lGvil~el~~g~~Pf~~~~~--~~~-~ 205 (316)
T cd05620 147 VFGD--------NRASTFCGTPDYIAPEILQGLKYTFSVDWWS----------FGVLLYEMLIGQSPFHGDDE--DEL-F 205 (316)
T ss_pred ccCC--------CceeccCCCcCccCHHHHcCCCCCcccchhh----------hHHHHHHHHhCCCCCCCCCH--HHH-H
Confidence 2111 1122356999999999999999999999999 88899999999988753221 111 1
Q ss_pred hhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHH-HHH
Q 040925 773 EVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMR-DVV 818 (833)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~-eil 818 (833)
+.+.... ...+..+...+.+++.+||+.||++||++. ++.
T Consensus 206 ~~~~~~~------~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 206 ESIRVDT------PHYPRWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred HHHHhCC------CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 1111100 001112355678999999999999999984 555
No 124
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=6.6e-35 Score=303.32 Aligned_cols=255 Identities=26% Similarity=0.421 Sum_probs=200.6
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
.++|++.+.||+|++|.||+|.+. +++.||+|.++... ...+.+.+|++++++++||||+++++++.... ..+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 77 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEE-----PIY 77 (261)
T ss_pred hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCC-----Cee
Confidence 457999999999999999999986 56789999987443 33567899999999999999999999875544 789
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||+++++|.+++...... .+++..+..++.|++.|+.|||+. +|+||||||+||++++++.+||+|||++
T Consensus 78 lv~e~~~~~~L~~~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~ 150 (261)
T cd05068 78 IVTELMKYGSLLEYLQGGAGR----ALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLA 150 (261)
T ss_pred eeeecccCCcHHHHHhccCCC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceE
Confidence 999999999999999765421 689999999999999999999999 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCcccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEIVDP 768 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~~~~ 768 (833)
+......... ..+..++..|+|||+..+..++.++|||| +|++++++++ +..|+.... ..
T Consensus 151 ~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~s----------lG~~l~el~t~g~~p~~~~~--~~ 211 (261)
T cd05068 151 RVIKEDIYEA-------REGAKFPIKWTAPEAALYNRFSIKSDVWS----------FGILLTEIVTYGRMPYPGMT--NA 211 (261)
T ss_pred EEccCCcccc-------cCCCcCceeccCccccccCCCCchhhHHH----------HHHHHHHHHhcCCCCCCCCC--HH
Confidence 8765322111 11122356899999999889999999999 7888888887 776654211 11
Q ss_pred cchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 040925 769 SLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCH 823 (833)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 823 (833)
.... .+..... ...+..++..+.+++.+||+.+|++||+++++.+.|++
T Consensus 212 ~~~~-~~~~~~~-----~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 212 EVLQ-QVDQGYR-----MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred HHHH-HHHcCCC-----CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 1111 1111100 01122346778999999999999999999999999975
No 125
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=7.5e-36 Score=309.40 Aligned_cols=251 Identities=28% Similarity=0.497 Sum_probs=189.2
Q ss_pred cCceeccCcceEEEEEEEC----CCceEEEEEEeeccCCc-chhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 535 SSNMIGQGSFGYVYKGTLG----EDEMIVAVKVINLKYKG-ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 535 ~~~~lg~G~~g~Vy~~~~~----~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
+.+.||.|+||.||+|.+. ..+..|+||.++..... ..+.+.+|++.+++++||||++++|++...+ ..+
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~-----~~~ 77 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENE-----PLF 77 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSS-----SEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccc-----ccc
Confidence 4578999999999999997 45788999999654332 3678999999999999999999999987444 589
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||+++|+|.+++...... .+++.++..|+.||++||+|||+. +++|+||+|+||+++.++.+||+|||++
T Consensus 78 lv~e~~~~g~L~~~L~~~~~~----~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~ 150 (259)
T PF07714_consen 78 LVMEYCPGGSLDDYLKSKNKE----PLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLS 150 (259)
T ss_dssp EEEE--TTEBHHHHHHHTCTT----TSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTG
T ss_pred ccccccccccccccccccccc----cccccccccccccccccccccccc---cccccccccccccccccccccccccccc
Confidence 999999999999999987222 689999999999999999999999 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCcccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEIVDP 768 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~~~~ 768 (833)
.......... ......+...|+|||++.+..++.++|||| +|+.++|+++ +..|+.... ..
T Consensus 151 ~~~~~~~~~~------~~~~~~~~~~~~aPE~~~~~~~~~ksDVys----------fG~~l~ei~~~~~~p~~~~~--~~ 212 (259)
T PF07714_consen 151 RPISEKSKYK------NDSSQQLPLRYLAPEVLKDGEYTKKSDVYS----------FGMLLYEILTLGKFPFSDYD--NE 212 (259)
T ss_dssp EETTTSSSEE------ESTTSESGGGGS-HHHHHHSEESHHHHHHH----------HHHHHHHHHTTSSGTTTTSC--HH
T ss_pred cccccccccc------cccccccccccccccccccccccccccccc----------cccccccccccccccccccc--cc
Confidence 8763221110 111234778999999998888999999999 7778888887 455543211 11
Q ss_pred cchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 040925 769 SLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKL 821 (833)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 821 (833)
...... .... ....+..++..+.+++.+||..||++|||++++++.|
T Consensus 213 ~~~~~~-~~~~-----~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 213 EIIEKL-KQGQ-----RLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp HHHHHH-HTTE-----ETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred cccccc-cccc-----cceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 111111 1111 1112233567788999999999999999999999876
No 126
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=8.7e-35 Score=304.76 Aligned_cols=265 Identities=25% Similarity=0.390 Sum_probs=201.1
Q ss_pred CccCceeccCcceEEEEEEECCC---ceEEEEEEeeccCC--cchhHHHHHHHHHhhcCCCccceEeeEeecCCC-CCCc
Q 040925 533 FSSSNMIGQGSFGYVYKGTLGED---EMIVAVKVINLKYK--GASRSFVAECEALRNIRHRNLIKIITICSSTDF-KGTD 606 (833)
Q Consensus 533 y~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 606 (833)
|.+.+.||+|+||.||+|....+ +..||+|.++.... .....+.+|++.++.++||||+++++++..... ....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 56789999999999999987543 47899999875422 234578999999999999999999998765442 2334
Q ss_pred eEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccc
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDF 686 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 686 (833)
..+++|||+++|+|.+++...........+++..++.++.|++.||+|||+. +++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence 5799999999999999986543222223689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCccccc
Q 040925 687 GLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEI 765 (833)
Q Consensus 687 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~ 765 (833)
|+++.......... .....++..|+|||++.+..++.++|||| +|++++++++ +..|+....
T Consensus 158 g~~~~~~~~~~~~~------~~~~~~~~~~~~pe~~~~~~~~~~~Dv~S----------lG~il~el~~~g~~p~~~~~- 220 (273)
T cd05035 158 GLSKKIYSGDYYRQ------GRIAKMPVKWIAIESLADRVYTSKSDVWA----------FGVTMWEIATRGQTPYPGVE- 220 (273)
T ss_pred cceeeccccccccc------cccccCCccccCHhhcccCCCCcccchHH----------HHHHHHHHHhCCCCCCCCCC-
Confidence 99986644321110 11123567899999998888999999999 7778888877 666653211
Q ss_pred ccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 040925 766 VDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHT 824 (833)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i 824 (833)
............ ....+..++..+.+++.+||+.||++|||+.|+++.|+.+
T Consensus 221 -~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 221 -NHEIYDYLRHGN------RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred -HHHHHHHHHcCC------CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 111111111111 0111234567889999999999999999999999999875
No 127
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.2e-34 Score=302.54 Aligned_cols=262 Identities=23% Similarity=0.309 Sum_probs=206.2
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
++|++.+.||+|++|.||+|....+++.||+|.++... ....+.+.+|++++++++|++|+++++++...+ .
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~-----~ 76 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENN-----E 76 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCC-----e
Confidence 57999999999999999999999899999999986422 223567899999999999999999999976544 7
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.++||||+++|+|.+++...... ...+++.+++.++.|++.||+|||+. ||+||||||+||+++.++.++|+|||
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~ 151 (267)
T cd08224 77 LNIVLELADAGDLSRMIKHFKKQ--KRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred EEEEEecCCCCCHHHHHHHhccc--CCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccc
Confidence 89999999999999998653221 12589999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD 767 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~ 767 (833)
++........ ......|++.|+|||++.+..++.++|||| +|++++++.++..|+......-
T Consensus 152 ~~~~~~~~~~--------~~~~~~~~~~y~apE~~~~~~~~~~~Di~s----------lG~il~~l~~g~~p~~~~~~~~ 213 (267)
T cd08224 152 LGRFFSSKTT--------AAHSLVGTPYYMSPERIHENGYNFKSDIWS----------LGCLLYEMAALQSPFYGDKMNL 213 (267)
T ss_pred eeeeccCCCc--------ccceecCCccccCHHHhccCCCCchhcHHH----------HHHHHHHHHHCCCCcccCCccH
Confidence 9876543211 111245889999999998888999999999 7888889988888764222100
Q ss_pred ccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhh
Q 040925 768 PSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTR 825 (833)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~ 825 (833)
............ .......++..+.+++.+||..+|++|||+.+|++.++++.
T Consensus 214 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 214 YSLCKKIEKCDY-----PPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred HHHHhhhhcCCC-----CCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 001000000000 00111245667899999999999999999999999998874
No 128
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=7.7e-35 Score=305.71 Aligned_cols=259 Identities=22% Similarity=0.341 Sum_probs=197.7
Q ss_pred cCCccCceeccCcceEEEEEEECCCce----EEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCC
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEM----IVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGT 605 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 605 (833)
++|++.+.||+|+||.||+|.+..+++ .||+|.+..... ....++..|+..+++++||||+++++++..
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~------ 80 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG------ 80 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC------
Confidence 478899999999999999999876665 477787753322 233567888889999999999999998642
Q ss_pred ceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcc
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 685 (833)
...+++|||+++|+|.+++..... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|
T Consensus 81 ~~~~~i~e~~~~gsL~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~D 152 (279)
T cd05111 81 ASLQLVTQLSPLGSLLDHVRQHRD-----SLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIAD 152 (279)
T ss_pred CccEEEEEeCCCCcHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcC
Confidence 246789999999999999976432 589999999999999999999999 999999999999999999999999
Q ss_pred cccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCcccc
Q 040925 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVME 764 (833)
Q Consensus 686 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~ 764 (833)
||.++........ .......++..|+|||++.+..++.++|||| +|++++++++ +..|+....
T Consensus 153 fg~~~~~~~~~~~------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~s----------lG~il~el~t~g~~p~~~~~ 216 (279)
T cd05111 153 FGVADLLYPDDKK------YFYSEHKTPIKWMALESILFGRYTHQSDVWS----------YGVTVWEMMSYGAEPYAGMR 216 (279)
T ss_pred CccceeccCCCcc------cccCCCCCcccccCHHHhccCCcCchhhHHH----------HHHHHHHHHcCCCCCCCCCC
Confidence 9999865432211 1112234778899999998888999999999 7777888876 666654211
Q ss_pred cccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhhh
Q 040925 765 IVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRET 827 (833)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~~ 827 (833)
+....+........ ..+..++..+.+++.+||..||++|||+.|+++.+..+.++
T Consensus 217 ---~~~~~~~~~~~~~~-----~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 217 ---PHEVPDLLEKGERL-----AQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred ---HHHHHHHHHCCCcC-----CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 11111111111100 01112345678899999999999999999999999887764
No 129
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=4.1e-35 Score=312.77 Aligned_cols=242 Identities=23% Similarity=0.309 Sum_probs=190.5
Q ss_pred ceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhc-CCCccceEeeEeecCCCCCCceEeEEE
Q 040925 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNI-RHRNLIKIITICSSTDFKGTDFKAFVF 612 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 612 (833)
+.||+|+||.||+|++..+++.||||+++... .........|..++... +||||+++++++...+ ..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~-----~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKE-----NLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCC-----EEEEEE
Confidence 47999999999999999899999999997542 23345567788888765 8999999999976554 899999
Q ss_pred EecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccccc
Q 040925 613 EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL 692 (833)
Q Consensus 613 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 692 (833)
||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 ey~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05619 76 EYLNGGDLMFHIQSCH------KFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKEN 146 (316)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceEC
Confidence 9999999999997643 688999999999999999999999 9999999999999999999999999998743
Q ss_pred CcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchh
Q 040925 693 SDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLM 772 (833)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~ 772 (833)
.... .......||+.|+|||++.+..++.++|||| .|+++++++++..|+..... ....
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws----------lG~il~el~~G~~pf~~~~~---~~~~ 205 (316)
T cd05619 147 MLGD--------AKTCTFCGTPDYIAPEILLGQKYNTSVDWWS----------FGVLLYEMLIGQSPFHGHDE---EELF 205 (316)
T ss_pred CCCC--------CceeeecCCccccCHHHHcCCCCCchhhhhh----------HHHHHHHHHhCCCCCCCCCH---HHHH
Confidence 2211 1112356999999999999999999999999 88899999999888753221 1111
Q ss_pred hhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHH-HHHH
Q 040925 773 EVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMR-DVVA 819 (833)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~-eil~ 819 (833)
..+.... ...+......+.+++.+||..||++||++. ++.+
T Consensus 206 ~~i~~~~------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 206 QSIRMDN------PCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred HHHHhCC------CCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 1111000 011122455678999999999999999997 5643
No 130
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=2.9e-35 Score=313.68 Aligned_cols=190 Identities=27% Similarity=0.368 Sum_probs=166.3
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcC-C-----CccceEeeEeecCCCCCC
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIR-H-----RNLIKIITICSSTDFKGT 605 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~~~~~~~~~~~~~~ 605 (833)
+|.+.+.||+|+||+|.+|.+..+++.||||+++.. ....++...|+.+|..++ | -|+|++++++...+
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~---- 261 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN---- 261 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc----
Confidence 899999999999999999999999999999999743 334567788999999996 4 48999999966554
Q ss_pred ceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCC--CcEEE
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHD--MVAHV 683 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~--~~~kL 683 (833)
+.|||+|.++. +|+++++.+... .++...++.++.||+.||.+||+. +|||+||||||||+.+- ..+||
T Consensus 262 -HlciVfELL~~-NLYellK~n~f~----Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKV 332 (586)
T KOG0667|consen 262 -HLCIVFELLST-NLYELLKNNKFR----GLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKV 332 (586)
T ss_pred -ceeeeehhhhh-hHHHHHHhcCCC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeE
Confidence 99999999964 999999988754 799999999999999999999999 99999999999999754 37999
Q ss_pred cccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccC
Q 040925 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNE 746 (833)
Q Consensus 684 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~ 746 (833)
+|||.|+.....-. .++.+..|+|||++.|.+|+.+.||||.||+..|++.+
T Consensus 333 IDFGSSc~~~q~vy-----------tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG 384 (586)
T KOG0667|consen 333 IDFGSSCFESQRVY-----------TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTG 384 (586)
T ss_pred EecccccccCCcce-----------eeeeccccccchhhccCCCCCccceeehhhhHHhHhcC
Confidence 99999987654321 35688999999999999999999999999988887643
No 131
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=6.4e-35 Score=306.43 Aligned_cols=252 Identities=23% Similarity=0.327 Sum_probs=195.5
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC-CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY-KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
++|++.+.||+|++|.||+|++..+++.||+|.+.... ....+.+.+|++++++++||||+++++++.... ..+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~ 75 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVEN-----RIS 75 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECC-----EEE
Confidence 36888999999999999999998899999999986542 223457889999999999999999999976654 789
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||+++|+|..+. .+++..+..++.|++.||.|||+. +|+|+||||+||+++.++.+||+|||++
T Consensus 76 lv~e~~~~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~ 142 (279)
T cd06619 76 ICTEFMDGGSLDVYR----------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVS 142 (279)
T ss_pred EEEecCCCCChHHhh----------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcc
Confidence 999999999997542 467888999999999999999999 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPS 769 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~ 769 (833)
....... .....||+.|+|||++.+..++.++|+|| +|++++++.++..|+.........
T Consensus 143 ~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Dvws----------lG~~l~~l~~g~~pf~~~~~~~~~ 202 (279)
T cd06619 143 TQLVNSI----------AKTYVGTNAYMAPERISGEQYGIHSDVWS----------LGISFMELALGRFPYPQIQKNQGS 202 (279)
T ss_pred eeccccc----------ccCCCCChhhcCceeecCCCCCCcchHHH----------HHHHHHHHHhCCCCchhhcccccc
Confidence 7653321 11246899999999999989999999999 788888888888886532111110
Q ss_pred chhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 770 LLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.......................+..+.+++.+||..||++||+++|+++.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 203 LMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred cchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 000000000000000011112244568899999999999999999999875
No 132
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=7.5e-35 Score=306.77 Aligned_cols=266 Identities=23% Similarity=0.321 Sum_probs=200.5
Q ss_pred CC-ccCceeccCcceEEEEEEE----CCCceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCC
Q 040925 532 EF-SSSNMIGQGSFGYVYKGTL----GEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGT 605 (833)
Q Consensus 532 ~y-~~~~~lg~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 605 (833)
+| ++.+.||+|+||+||++.. ..++..||+|.++.... .....+.+|++++++++||||+++++++.... .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~ 80 (283)
T cd05080 4 RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQG---G 80 (283)
T ss_pred hhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC---C
Confidence 45 8899999999999988653 34678899999975432 23567889999999999999999999875432 3
Q ss_pred ceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcc
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 685 (833)
...++||||+++|+|.+++... .+++.+++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|
T Consensus 81 ~~~~lv~e~~~~~~l~~~~~~~-------~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~d 150 (283)
T cd05080 81 KGLQLIMEYVPLGSLRDYLPKH-------KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGD 150 (283)
T ss_pred ceEEEEecCCCCCCHHHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEee
Confidence 4689999999999999999753 589999999999999999999999 999999999999999999999999
Q ss_pred cccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccc-
Q 040925 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVME- 764 (833)
Q Consensus 686 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~- 764 (833)
||+++........... .....++..|+|||+..+..++.++|||| +|+++++++++..|+....
T Consensus 151 fg~~~~~~~~~~~~~~-----~~~~~~~~~~~~PE~~~~~~~~~~~Di~s----------lG~~l~el~tg~~p~~~~~~ 215 (283)
T cd05080 151 FGLAKAVPEGHEYYRV-----REDGDSPVFWYAVECLKENKFSYASDVWS----------FGVTLYELLTHCDSKQSPPK 215 (283)
T ss_pred cccccccCCcchhhcc-----CCCCCCCceeeCHhHhcccCCCcccccHH----------HHHHHHHHHhCCCCCCCCcc
Confidence 9999866442211100 11123567799999998888999999999 7888888888877754211
Q ss_pred ----cccccchhhhccc--cchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhh
Q 040925 765 ----IVDPSLLMEVMTN--NSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTR 825 (833)
Q Consensus 765 ----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~ 825 (833)
..+.......... ...........+..++..+.+++.+||+.||++|||++++++.|+++.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 216 KFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 1111000000000 000000000112335678999999999999999999999999999875
No 133
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=9e-35 Score=303.25 Aligned_cols=258 Identities=26% Similarity=0.398 Sum_probs=199.6
Q ss_pred hcCCccCceeccCcceEEEEEEECCC---ceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCC
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGED---EMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGT 605 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 605 (833)
.++|++.+.||+|+||.||+|.+..+ ...||||.++.... .....+.+|+.++++++||||+++++++....
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 78 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSR---- 78 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCC----
Confidence 35799999999999999999998643 46799999875433 23457889999999999999999999875544
Q ss_pred ceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcc
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 685 (833)
..++||||+++++|.+++..... .+++.+++.++.|++.|++|||+. +|+||||||+||++++++.+||+|
T Consensus 79 -~~~iv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~d 149 (266)
T cd05033 79 -PVMIITEYMENGSLDKFLRENDG-----KFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSD 149 (266)
T ss_pred -ceEEEEEcCCCCCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECc
Confidence 78999999999999999976432 689999999999999999999999 999999999999999999999999
Q ss_pred cccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCcccc
Q 040925 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVME 764 (833)
Q Consensus 686 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~ 764 (833)
||+++......... ......+++.|+|||.+.+..++.++|||| +|+.++++++ +..|+....
T Consensus 150 fg~~~~~~~~~~~~------~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~s----------lG~~l~~l~~~g~~p~~~~~ 213 (266)
T cd05033 150 FGLSRRLEDSEATY------TTKGGKIPIRWTAPEAIAYRKFTSASDVWS----------FGIVMWEVMSYGERPYWDMS 213 (266)
T ss_pred cchhhcccccccce------eccCCCCCccccChhhhccCCCccccchHH----------HHHHHHHHHccCCCCCCCCC
Confidence 99998764211100 011123567899999999889999999999 6667777665 655553211
Q ss_pred cccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 040925 765 IVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHT 824 (833)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i 824 (833)
+...... +.... ....+.+++..+.+++.+||+.+|++||+++||++.|+++
T Consensus 214 --~~~~~~~-~~~~~-----~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 214 --NQDVIKA-VEDGY-----RLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred --HHHHHHH-HHcCC-----CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1111111 11110 0011233466789999999999999999999999999875
No 134
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=4.3e-35 Score=303.51 Aligned_cols=252 Identities=23% Similarity=0.384 Sum_probs=195.8
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeE
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAF 610 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 610 (833)
++|++.+.||+|++|.||+|.+. .+..||+|.++... ...+.+.+|+.++++++||||+++++++...+ ..++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~l 76 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQR-----PIYI 76 (256)
T ss_pred HHeEEeeEecCcccceEEEEEec-CCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCC-----CcEE
Confidence 46889999999999999999886 35569999987432 33467899999999999999999999976544 6799
Q ss_pred EEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccc
Q 040925 611 VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690 (833)
Q Consensus 611 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 690 (833)
||||+++|+|.+++..... .+++.+++.++.|++.||+|||+. +++|+||||+||+++.++.+||+|||.++
T Consensus 77 v~e~~~~~~l~~~i~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~ 148 (256)
T cd05113 77 VTEYMSNGCLLNYLREHGK-----RFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSR 148 (256)
T ss_pred EEEcCCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccce
Confidence 9999999999999976432 589999999999999999999999 99999999999999999999999999987
Q ss_pred ccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCccccccccc
Q 040925 691 FLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEIVDPS 769 (833)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~~~~~ 769 (833)
......... .....++..|+|||+..+..++.++|||| +|++++++++ +..|+..... +.
T Consensus 149 ~~~~~~~~~-------~~~~~~~~~y~~pe~~~~~~~~~~~Di~s----------lG~~l~~l~~~g~~p~~~~~~--~~ 209 (256)
T cd05113 149 YVLDDEYTS-------SVGSKFPVRWSPPEVLLYSKFSSKSDVWA----------FGVLMWEVYSLGKMPYERFNN--SE 209 (256)
T ss_pred ecCCCceee-------cCCCccChhhCCHHHHhcCcccchhHHHH----------HHHHHHHHhcCCCCCcCcCCH--HH
Confidence 654432111 11223667899999998888999999999 6777777776 6666542211 11
Q ss_pred chhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 040925 770 LLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLC 822 (833)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 822 (833)
........... ..+...+..+.+++.+||+.||++|||+.++++.++
T Consensus 210 ~~~~~~~~~~~------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 210 TVEKVSQGLRL------YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred HHHHHhcCCCC------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 11111111110 011123567899999999999999999999998763
No 135
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=7.2e-35 Score=301.37 Aligned_cols=249 Identities=24% Similarity=0.354 Sum_probs=191.5
Q ss_pred ceeccCcceEEEEEEECCCceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEEEec
Q 040925 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYM 615 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 615 (833)
+.||+|+||.||+|++..+++.||+|.+..... .....+.+|++++++++||||+++++++.... ..++||||+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~~ 75 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ-----PIYIVMELV 75 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCC-----CeEEEEeec
Confidence 479999999999999988999999998864322 23467899999999999999999999976544 789999999
Q ss_pred CCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccCcc
Q 040925 616 ENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDH 695 (833)
Q Consensus 616 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 695 (833)
++++|.+++..... .+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+......
T Consensus 76 ~~~~L~~~~~~~~~-----~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 147 (252)
T cd05084 76 QGGDFLTFLRTEGP-----RLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDG 147 (252)
T ss_pred cCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccc
Confidence 99999999975431 588999999999999999999999 9999999999999999999999999998754432
Q ss_pred cccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCcccccccccchhhh
Q 040925 696 QLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEIVDPSLLMEV 774 (833)
Q Consensus 696 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~~~~~~~~~~ 774 (833)
..... .....++..|+|||.+.+..++.++|||| +|++++++++ +..|+......+ . ...
T Consensus 148 ~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s----------lG~il~e~~~~~~~p~~~~~~~~--~-~~~ 208 (252)
T cd05084 148 VYAST------GGMKQIPVKWTAPEALNYGRYSSESDVWS----------FGILLWEAFSLGAVPYANLSNQQ--T-REA 208 (252)
T ss_pred ccccc------CCCCCCceeecCchhhcCCCCChHHHHHH----------HHHHHHHHHhCCCCCccccCHHH--H-HHH
Confidence 11000 00112356799999998888999999999 6777777775 555543211100 0 011
Q ss_pred ccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 040925 775 MTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLC 822 (833)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 822 (833)
..... ....+..++..+.+++.+||..||++|||+.|+.+.|+
T Consensus 209 ~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 209 IEQGV-----RLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHcCC-----CCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 10000 01112234667899999999999999999999999875
No 136
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=4.2e-35 Score=314.31 Aligned_cols=238 Identities=26% Similarity=0.299 Sum_probs=185.7
Q ss_pred ceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHH-HHhhcCCCccceEeeEeecCCCCCCceEeEEE
Q 040925 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECE-ALRNIRHRNLIKIITICSSTDFKGTDFKAFVF 612 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 612 (833)
+.||+|+||+||+|++..+++.||+|++.... ......+..|.. +++.++||||+++++++...+ ..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~-----~~~lv~ 75 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTAD-----KLYFVL 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCC-----EEEEEE
Confidence 47999999999999999999999999996432 122334455554 567889999999999875544 899999
Q ss_pred EecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccccc
Q 040925 613 EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL 692 (833)
Q Consensus 613 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 692 (833)
||+++|+|.+++.... .+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~ 146 (323)
T cd05575 76 DYVNGGELFFHLQRER------SFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (323)
T ss_pred cCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCccc
Confidence 9999999999987654 688999999999999999999999 9999999999999999999999999998753
Q ss_pred CcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchh
Q 040925 693 SDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLM 772 (833)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~ 772 (833)
.... .......||+.|+|||++.+..++.++|||| +|+++++++++..|+...+.. ....
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws----------lG~il~ell~g~~pf~~~~~~--~~~~ 206 (323)
T cd05575 147 IEHS--------KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWC----------LGAVLYEMLYGLPPFYSRDTA--EMYD 206 (323)
T ss_pred ccCC--------CccccccCChhhcChhhhcCCCCCccccccc----------cchhhhhhhcCCCCCCCCCHH--HHHH
Confidence 2211 1122356999999999999999999999999 788888888888887532211 1111
Q ss_pred hhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHH
Q 040925 773 EVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMR 815 (833)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ 815 (833)
....... ......+..+.+++.+|++.||++||++.
T Consensus 207 ~i~~~~~-------~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 207 NILNKPL-------RLKPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred HHHcCCC-------CCCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 1111111 01122356788999999999999999985
No 137
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=5.1e-35 Score=313.63 Aligned_cols=242 Identities=21% Similarity=0.261 Sum_probs=192.8
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhc-CCCccceEeeEeecCCCCCCce
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNI-RHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 607 (833)
+|++.+.||+|+||.||+|++..+++.||+|+++... ....+....|.+++..+ +|++|+++++++...+ .
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~-----~ 75 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMD-----R 75 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCC-----E
Confidence 5888999999999999999999999999999997432 22234567788888877 5899999999865544 8
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.++||||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG 146 (323)
T cd05616 76 LYFVMEYVNGGDLMYQIQQVG------RFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred EEEEEcCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCC
Confidence 999999999999999987654 688999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD 767 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~ 767 (833)
+++....... ......||+.|+|||++.+..++.++|||| +|+++++++++..|+.....
T Consensus 147 ~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS----------lGvil~elltg~~Pf~~~~~-- 206 (323)
T cd05616 147 MCKENMWDGV--------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWA----------FGVLLYEMLAGQAPFEGEDE-- 206 (323)
T ss_pred CceecCCCCC--------ccccCCCChhhcCHHHhcCCCCCCccchhc----------hhHHHHHHHhCCCCCCCCCH--
Confidence 9875432111 112356999999999999999999999999 88899999999988753221
Q ss_pred ccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCH
Q 040925 768 PSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDM 814 (833)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 814 (833)
............ ..+...+..+.+++.+|++.||++|++.
T Consensus 207 ~~~~~~i~~~~~-------~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 207 DELFQSIMEHNV-------AYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred HHHHHHHHhCCC-------CCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 111111111111 1122345678899999999999999985
No 138
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=5.9e-35 Score=306.11 Aligned_cols=246 Identities=23% Similarity=0.300 Sum_probs=191.7
Q ss_pred eccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEEEec
Q 040925 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYM 615 (833)
Q Consensus 539 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 615 (833)
||+|+||.||+|+...+++.||+|.+.... ....+.+..|++++++++||||+++++++.... ..++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~-----~~~lv~e~~ 75 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKT-----HLCLVMSLM 75 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCC-----eEEEEEecC
Confidence 699999999999999899999999986321 122345667999999999999999999865544 899999999
Q ss_pred CCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccCcc
Q 040925 616 ENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDH 695 (833)
Q Consensus 616 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 695 (833)
++|+|.+++...... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 76 ~g~~L~~~~~~~~~~----~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~ 148 (277)
T cd05607 76 NGGDLKYHIYNVGER----GLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG 148 (277)
T ss_pred CCCCHHHHHHhcccc----CCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCC
Confidence 999999888654422 588999999999999999999999 9999999999999999999999999998765432
Q ss_pred cccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccc-cccccch-hh
Q 040925 696 QLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVME-IVDPSLL-ME 773 (833)
Q Consensus 696 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~-~~~~~~~-~~ 773 (833)
.. .....||+.|+|||++.+..++.++|||| .|+++++++++..|+.... ....... ..
T Consensus 149 ~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Dvws----------lGv~l~el~~g~~p~~~~~~~~~~~~~~~~ 209 (277)
T cd05607 149 KT---------ITQRAGTNGYMAPEILKEEPYSYPVDWFA----------MGCSIYEMVAGRTPFKDHKEKVAKEELKRR 209 (277)
T ss_pred ce---------eeccCCCCCccCHHHHccCCCCCchhHHH----------HHHHHHHHHhCCCCCCCCcchhhHHHHHHH
Confidence 11 11235899999999999888999999999 8889999999998875211 1111110 00
Q ss_pred hccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 040925 774 VMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKL 821 (833)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 821 (833)
..... .......++..+.+++.+||+.||++||+++|+++.+
T Consensus 210 ~~~~~------~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 210 TLEDE------VKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred hhccc------cccccccCCHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence 00000 0011123466789999999999999999997766443
No 139
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=6.5e-35 Score=304.60 Aligned_cols=262 Identities=23% Similarity=0.295 Sum_probs=205.4
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC---cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK---GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
++|++.+.||+|++|.||+|++..+++.||||.+..... .....+.+|+++++.++||||+++++++...+ .
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~ 76 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN-----E 76 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCC-----e
Confidence 478899999999999999999988999999998864322 23357889999999999999999999976554 8
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.+++|||+++++|.+++...... ...+++.+++.++.|++.||+|||+. +++|+||||+||+++.++.++|+|||
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg 151 (267)
T cd08229 77 LNIVLELADAGDLSRMIKHFKKQ--KRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred EEEEEEecCCCCHHHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcch
Confidence 89999999999999998743211 12689999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD 767 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~ 767 (833)
++........ ......|++.|+|||+..+..++.++|+|| +|+++++++++..|+.....-.
T Consensus 152 ~~~~~~~~~~--------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~s----------lG~il~~l~~g~~p~~~~~~~~ 213 (267)
T cd08229 152 LGRFFSSKTT--------AAHSLVGTPYYMSPERIHENGYNFKSDIWS----------LGCLLYEMAALQSPFYGDKMNL 213 (267)
T ss_pred hhhccccCCc--------ccccccCCcCccCHHHhcCCCccchhhHHH----------HHHHHHHHHhCCCCcccccchH
Confidence 9876543221 112345899999999998888999999999 7888888888888764211100
Q ss_pred ccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhh
Q 040925 768 PSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTR 825 (833)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~ 825 (833)
.......... .........++..+.+++.+||..||++|||+.+|++.++++.
T Consensus 214 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 214 YSLCKKIEQC-----DYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred HHHhhhhhcC-----CCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 0110000000 0011112345678999999999999999999999999998764
No 140
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=7.5e-35 Score=305.04 Aligned_cols=265 Identities=23% Similarity=0.393 Sum_probs=198.1
Q ss_pred CccCceeccCcceEEEEEEECCCce--EEEEEEeeccC--CcchhHHHHHHHHHhhcCCCccceEeeEeecCCC-CCCce
Q 040925 533 FSSSNMIGQGSFGYVYKGTLGEDEM--IVAVKVINLKY--KGASRSFVAECEALRNIRHRNLIKIITICSSTDF-KGTDF 607 (833)
Q Consensus 533 y~~~~~lg~G~~g~Vy~~~~~~~~~--~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~~ 607 (833)
|.+.+.||+|+||.||+|++..++. .||+|.++... ....+.+.+|+++++.++||||+++++++..... .....
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 4567899999999999999876664 68999986432 2335678899999999999999999998754321 12235
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.+++|||+++|+|.+++...........+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCC
Confidence 789999999999999875332111122589999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCcccccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEIV 766 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~~ 766 (833)
+++.+........ .....+++.|+|||+..+..++.++|||| +|++++++++ +..|+....
T Consensus 158 ~~~~~~~~~~~~~------~~~~~~~~~~~~pe~~~~~~~~~~~Di~s----------lG~il~el~~~g~~p~~~~~-- 219 (272)
T cd05075 158 LSKKIYNGDYYRQ------GRIAKMPVKWIAIESLADRVYTTKSDVWS----------FGVTMWEIATRGQTPYPGVE-- 219 (272)
T ss_pred cccccCcccceec------CCcccCCcccCCHHHccCCCcChHHHHHH----------HHHHHHHHHcCCCCCCCCCC--
Confidence 9987644321100 01123677899999999989999999999 7777888877 555553211
Q ss_pred cccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 040925 767 DPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHT 824 (833)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i 824 (833)
.... .+...... .......++..+.+++.+||+.||++|||++++++.|+++
T Consensus 220 ~~~~-~~~~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 220 NSEI-YDYLRQGN-----RLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred HHHH-HHHHHcCC-----CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1111 11111110 0011223456789999999999999999999999999875
No 141
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-37 Score=338.61 Aligned_cols=422 Identities=28% Similarity=0.364 Sum_probs=338.2
Q ss_pred CcEEEcCCCcCcccCCccccCCCCCCEEEccCCcccccCCccCCCCCCCCEEEcCCCcccccCCccccCCCCCcEEECCC
Q 040925 1 LQTLAVNDNYLTGQLPDFVGNLSDLEVIRIMGNSLGGKIPTTLGLLRNLVSLNVAENKFSGMFPRSICNISSLELIQLAL 80 (833)
Q Consensus 1 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 80 (833)
|+.||+++|++. ..|..+..+.+|+.|+++.|-| ...|.+..++.+|++|+|.+|++. ..|..+..+.+|++|++|.
T Consensus 47 L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i-~~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~ 123 (1081)
T KOG0618|consen 47 LKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYI-RSVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSF 123 (1081)
T ss_pred eEEeeccccccc-cCCchhhhHHHHhhcccchhhH-hhCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccch
Confidence 678999999998 7999999999999999999999 678888999999999999999998 7899999999999999999
Q ss_pred cccccccCchhhcCCCC-------------------ccEEEccCCcceeeCCccccCCCCCcEEEcccCccccccCcCcc
Q 040925 81 NRFSGNLPFDIVVNLPN-------------------LKALAIGGNNFFGSIPYSLSNASNLELLDLSVNQFKGNVSIDFS 141 (833)
Q Consensus 81 N~l~~~~~~~~~~~l~~-------------------L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~ 141 (833)
|.+. .+|.-++ .+.. ++.++|..|.+.+.++..+..+++ .|||++|.+. .....
T Consensus 124 N~f~-~~Pl~i~-~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~~dls 196 (1081)
T KOG0618|consen 124 NHFG-PIPLVIE-VLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME---VLDLS 196 (1081)
T ss_pred hccC-CCchhHH-hhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhhhhe--eeecccchhh---hhhhh
Confidence 9986 6775442 3333 444555555555555555544444 4788888776 33566
Q ss_pred CCCcCceEecccccCCCCCCCCcccccccCCCCCCCEEEccCCcCcccCChhHhhhcccccEEEccCccccccCChhhhc
Q 040925 142 SLKNLLWLNLEQNNLGTGTATDLDFVTFLTNCSSLKALSLADNQFGGELPHSIANLSSTVINFGIGRNQISGTIPPGIRN 221 (833)
Q Consensus 142 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~ 221 (833)
.+.+|+.|.++.|++..+.. ..++|+.|+.++|.++...+ .-.+..++.++++.|++++ .|+.++.
T Consensus 197 ~~~~l~~l~c~rn~ls~l~~----------~g~~l~~L~a~~n~l~~~~~---~p~p~nl~~~dis~n~l~~-lp~wi~~ 262 (1081)
T KOG0618|consen 197 NLANLEVLHCERNQLSELEI----------SGPSLTALYADHNPLTTLDV---HPVPLNLQYLDISHNNLSN-LPEWIGA 262 (1081)
T ss_pred hccchhhhhhhhcccceEEe----------cCcchheeeeccCcceeecc---ccccccceeeecchhhhhc-chHHHHh
Confidence 77778888888887765432 34788888999998872222 1234568889999999994 4599999
Q ss_pred CCCCCeEeccCCcccccCCccccCCCCCCEEEcccccCcccCCccccCCCCCCeEEeecccccCCCCCCCCCCC-cccee
Q 040925 222 LVNLIGFGAEENQLHGTIPDAIGELKNLQKLCLFRNFLQGRIPSGLGNLTKLANLELSSNSLQGNIPSSLGNCQ-NLMSF 300 (833)
Q Consensus 222 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L 300 (833)
+.+|+.+...+|++. ..|..+....+|+.|.+.+|.+. -+|....+++.|++|+|..|+|....+..|.-+. +|..|
T Consensus 263 ~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~l 340 (1081)
T KOG0618|consen 263 CANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTL 340 (1081)
T ss_pred cccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHH
Confidence 999999999999996 77888888999999999999998 6777888899999999999999854444444444 38888
Q ss_pred ecCCceecccCCcccccccccceeeecCCCccCCCCCcccccCCCcCEEeccCCcCCCCCCccccCCCCCcEEeecCCcc
Q 040925 301 TASQNKLTGALPHQLLSITTLSLYLDLSNNLLNGSLPLQVGHLKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSF 380 (833)
Q Consensus 301 ~l~~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 380 (833)
+.+.|++. ..|..-......++.|++.+|.++...-..+.+.+.|+.|+|++|++...+...+.++..|++|+||+|+|
T Consensus 341 n~s~n~l~-~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL 419 (1081)
T KOG0618|consen 341 NVSSNKLS-TLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKL 419 (1081)
T ss_pred hhhhcccc-ccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchh
Confidence 88999988 66644444444557899999999988777888999999999999999877777899999999999999999
Q ss_pred ccccCccccCCCCCCeEEccCcccCCCchhhhcCCCCCceEECccCcCcccc-CCCCccCCCccccccCCcCC
Q 040925 381 HGVIPLSLSFLKSIKELNVSSNNLSGQIPEFLKNLSVLEFLSLSYNHFEGEV-PTKGVFSNKTKISLQGNMKL 452 (833)
Q Consensus 381 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~-~~~~~~~~~~~l~l~~N~~~ 452 (833)
+ .+|.....+..|++|...+|+|. ..| .+..++.|+.+|++.|+++... |....+++++.+++.||.|.
T Consensus 420 ~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l 489 (1081)
T KOG0618|consen 420 T-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRL 489 (1081)
T ss_pred h-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCccc
Confidence 9 56788999999999999999998 677 7889999999999999998644 33334588999999999873
No 142
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=4.1e-35 Score=313.47 Aligned_cols=243 Identities=22% Similarity=0.263 Sum_probs=193.5
Q ss_pred ceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhc-CCCccceEeeEeecCCCCCCceEeEEE
Q 040925 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNI-RHRNLIKIITICSSTDFKGTDFKAFVF 612 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 612 (833)
+.||+|+||.||+|++..+++.||+|+++... ......+..|.++++.+ +||||+++++++...+ ..|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~-----~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKD-----RLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC-----EEEEEE
Confidence 47999999999999999899999999997432 23345677899999888 6999999999875544 899999
Q ss_pred EecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccccc
Q 040925 613 EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL 692 (833)
Q Consensus 613 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 692 (833)
||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~~~~~~------~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 146 (318)
T cd05570 76 EYVNGGDLMFHIQRSG------RFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEG 146 (318)
T ss_pred cCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeec
Confidence 9999999999987654 689999999999999999999999 9999999999999999999999999998743
Q ss_pred CcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchh
Q 040925 693 SDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLM 772 (833)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~ 772 (833)
.... .......||+.|+|||++.+..++.++|||| +|++++++++|..|+...+. .....
T Consensus 147 ~~~~--------~~~~~~~g~~~y~aPE~~~~~~~~~~~Diws----------lGvil~~l~~G~~pf~~~~~--~~~~~ 206 (318)
T cd05570 147 ILGG--------VTTSTFCGTPDYIAPEILSYQPYGPAVDWWA----------LGVLLYEMLAGQSPFEGDDE--DELFQ 206 (318)
T ss_pred CcCC--------CcccceecCccccCHHHhcCCCCCcchhhhh----------HHHHHHHHhhCCCCCCCCCH--HHHHH
Confidence 2211 1112346999999999999999999999999 88889999999888753221 11111
Q ss_pred hhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCH-----HHHHHH
Q 040925 773 EVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDM-----RDVVAK 820 (833)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~-----~eil~~ 820 (833)
....... ..+...+..+.+++.+||..||++|||+ .++++.
T Consensus 207 ~i~~~~~-------~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 207 SILEDEV-------RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred HHHcCCC-------CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 1111111 1112345678899999999999999999 777654
No 143
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=7.2e-35 Score=306.22 Aligned_cols=261 Identities=22% Similarity=0.356 Sum_probs=201.7
Q ss_pred hcCCccCceeccCcceEEEEEEECCCce----EEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCC
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEM----IVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFKG 604 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 604 (833)
..+|++.+.||+|+||.||+|++..+++ .||+|+++.... ...+.+.+|+.+++.++||||+++++++...
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~---- 81 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS---- 81 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC----
Confidence 3578999999999999999999866665 489999864432 2346788999999999999999999997543
Q ss_pred CceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEc
Q 040925 605 TDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVC 684 (833)
Q Consensus 605 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 684 (833)
..+++|||+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||+
T Consensus 82 --~~~l~~~~~~~g~l~~~l~~~~~-----~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~ 151 (279)
T cd05109 82 --TVQLVTQLMPYGCLLDYVRENKD-----RIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKIT 151 (279)
T ss_pred --CcEEEEEcCCCCCHHHHHhhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEEC
Confidence 46799999999999999976432 589999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCccc
Q 040925 685 DFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVM 763 (833)
Q Consensus 685 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~ 763 (833)
|||+++.......... .....+++.|+|||+..+..++.++|||| +|++++++++ +..|+...
T Consensus 152 dfG~~~~~~~~~~~~~------~~~~~~~~~y~~PE~~~~~~~~~~~Di~s----------lG~~l~el~t~g~~p~~~~ 215 (279)
T cd05109 152 DFGLARLLDIDETEYH------ADGGKVPIKWMALESILHRRFTHQSDVWS----------YGVTVWELMTFGAKPYDGI 215 (279)
T ss_pred CCCceeecccccceee------cCCCccchhhCCHHHhccCCCCchhHHHH----------HHHHHHHHHcCCCCCCCCC
Confidence 9999987643221110 11123577899999998889999999999 7777888776 66665421
Q ss_pred ccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhhhh
Q 040925 764 EIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRETF 828 (833)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~~~ 828 (833)
.. ........... ....+..++..+.+++.+||..||++||++.++++.++.+..+.
T Consensus 216 ~~---~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 216 PA---REIPDLLEKGE-----RLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred CH---HHHHHHHHCCC-----cCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 11 10011111110 00112234667889999999999999999999999998887654
No 144
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=5.7e-35 Score=306.75 Aligned_cols=247 Identities=23% Similarity=0.309 Sum_probs=192.9
Q ss_pred eccCcceEEEEEEECCCceEEEEEEeeccCC---cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEEEec
Q 040925 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYK---GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYM 615 (833)
Q Consensus 539 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 615 (833)
||+|+||+||+|.+..+++.||+|.+..... ...+.+..|+++++.++||||+++.+++.... ..++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~-----~~~lv~e~~ 75 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKT-----DLCLVMTIM 75 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCC-----eEEEEEeCC
Confidence 6999999999999999999999999864321 12356778999999999999999998865443 799999999
Q ss_pred CCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccCcc
Q 040925 616 ENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDH 695 (833)
Q Consensus 616 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 695 (833)
++|+|.+++...... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 76 ~~g~L~~~~~~~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 150 (280)
T cd05608 76 NGGDLRYHIYNVDEE--NPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDG 150 (280)
T ss_pred CCCCHHHHHHhcccc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCC
Confidence 999999887543211 12689999999999999999999999 9999999999999999999999999999765432
Q ss_pred cccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccc-ccc-cchhh
Q 040925 696 QLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEI-VDP-SLLME 773 (833)
Q Consensus 696 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~-~~~-~~~~~ 773 (833)
.. ......||+.|+|||++.+..++.++|||| +|+++++++++..|+..... ... .....
T Consensus 151 ~~--------~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws----------lG~il~el~~g~~pf~~~~~~~~~~~~~~~ 212 (280)
T cd05608 151 QS--------KTKGYAGTPGFMAPELLQGEEYDFSVDYFA----------LGVTLYEMIAARGPFRARGEKVENKELKQR 212 (280)
T ss_pred Cc--------cccccCCCcCccCHHHhcCCCCCccccHHH----------HHHHHHHHHhCCCCCCCCCcchhHHHHHHh
Confidence 21 112346999999999999999999999999 88899999999988753211 111 11111
Q ss_pred hccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCC-----CHHHHHHH
Q 040925 774 VMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERM-----DMRDVVAK 820 (833)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~ 820 (833)
.... ....+..++..+.+++.+||+.||++|| +++++++.
T Consensus 213 ~~~~-------~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 213 ILND-------SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred hccc-------CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 0000 0111234567788999999999999999 67777764
No 145
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.1e-34 Score=306.44 Aligned_cols=261 Identities=21% Similarity=0.280 Sum_probs=194.2
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC--cchhHHHHHHHHHhhc---CCCccceEeeEeecCCCCCCc
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNI---RHRNLIKIITICSSTDFKGTD 606 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~~~ 606 (833)
+|++.+.||+|+||.||+|++..+++.||+|.++.... .....+.+|+++++.+ +||||+++++++.........
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 58899999999999999999999999999999875422 2234566788877766 699999999998665444455
Q ss_pred eEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccc
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDF 686 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 686 (833)
..++||||++ ++|.+++...... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~~----~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~df 152 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPPP----GLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADF 152 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCCC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcc
Confidence 7899999997 4899988765422 589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccc
Q 040925 687 GLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIV 766 (833)
Q Consensus 687 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~ 766 (833)
|+++....... .....||+.|+|||++.+..++.++|||| .|+++++++++..++......
T Consensus 153 g~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Diws----------lG~~l~~l~~g~~~f~~~~~~ 213 (288)
T cd07863 153 GLARIYSCQMA---------LTPVVVTLWYRAPEVLLQSTYATPVDMWS----------VGCIFAEMFRRKPLFCGNSEA 213 (288)
T ss_pred CccccccCccc---------CCCccccccccCchHhhCCCCCCcchhhh----------HHHHHHHHHhCCcCcCCCCHH
Confidence 99986543211 11245899999999999889999999999 667777777666554311100
Q ss_pred cc--------------cchhhh--ccccch--hhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 767 DP--------------SLLMEV--MTNNSM--IQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 767 ~~--------------~~~~~~--~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
+. .+.... ...... .........++++..+.+++.+|++.||++|||+.|++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 214 DQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred HHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00 000000 000000 000001111234567889999999999999999999975
No 146
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=4.5e-35 Score=307.44 Aligned_cols=263 Identities=23% Similarity=0.364 Sum_probs=198.1
Q ss_pred HhcCCccCceeccCcceEEEEEEEC-----CCceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCC
Q 040925 529 ATGEFSSSNMIGQGSFGYVYKGTLG-----EDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDF 602 (833)
Q Consensus 529 ~~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 602 (833)
..++|++.+.||+|+||.||+|.+. .++..||+|+++.... .....+.+|+.+++.++||||+++++++....
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~- 82 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ- 82 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC-
Confidence 4678999999999999999999864 2457899999864322 23456889999999999999999999975443
Q ss_pred CCCceEeEEEEecCCCChhhhhccCCCcc----ccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCC
Q 040925 603 KGTDFKAFVFEYMENGSLKDWLHQSDDQV----EVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHD 678 (833)
Q Consensus 603 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~ 678 (833)
..++||||+++|+|.+++....... ....+++..+..++.|++.||+|||+. +++||||||+||+++++
T Consensus 83 ----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~ 155 (277)
T cd05062 83 ----PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 155 (277)
T ss_pred ----CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCC
Confidence 7899999999999999997543211 112467889999999999999999999 99999999999999999
Q ss_pred CcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-Hh
Q 040925 679 MVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TA 757 (833)
Q Consensus 679 ~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~ 757 (833)
+.+||+|||+++.......... .....+++.|||||++.+..++.++|||| +|++++++++ +.
T Consensus 156 ~~~~l~dfg~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~s----------lG~~l~el~~~~~ 219 (277)
T cd05062 156 FTVKIGDFGMTRDIYETDYYRK------GGKGLLPVRWMSPESLKDGVFTTYSDVWS----------FGVVLWEIATLAE 219 (277)
T ss_pred CCEEECCCCCccccCCcceeec------CCCCccCHhhcChhHhhcCCcCchhHHHH----------HHHHHHHHHcCCC
Confidence 9999999999876543221110 01124678899999999888999999999 7777788877 45
Q ss_pred CCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 040925 758 LPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCH 823 (833)
Q Consensus 758 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 823 (833)
.|+.... ............. ...+..++..+.+++.+||+.||++|||+.|+++.+++
T Consensus 220 ~p~~~~~--~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 220 QPYQGMS--NEQVLRFVMEGGL------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred CCCCCCC--HHHHHHHHHcCCc------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 5543111 0111111111100 01122345678999999999999999999999998763
No 147
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1e-34 Score=307.55 Aligned_cols=266 Identities=24% Similarity=0.362 Sum_probs=199.0
Q ss_pred HHhcCCccCceeccCcceEEEEEEECCC-----ceEEEEEEeeccCC-cchhHHHHHHHHHhhc-CCCccceEeeEeecC
Q 040925 528 KATGEFSSSNMIGQGSFGYVYKGTLGED-----EMIVAVKVINLKYK-GASRSFVAECEALRNI-RHRNLIKIITICSST 600 (833)
Q Consensus 528 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 600 (833)
...++|++.+.||+|+||.||+|..... ...||+|.++.... .....+.+|+++++++ +||||+++++++...
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 4456799999999999999999988643 37899999874322 2335688999999999 799999999997654
Q ss_pred CCCCCceEeEEEEecCCCChhhhhccCCCc----------cccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCC
Q 040925 601 DFKGTDFKAFVFEYMENGSLKDWLHQSDDQ----------VEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKP 670 (833)
Q Consensus 601 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp 670 (833)
+ ..+++|||+++|+|.+++...... .....+++..++.++.|++.||+|||+. +|+||||||
T Consensus 89 ~-----~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp 160 (293)
T cd05053 89 G-----PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAA 160 (293)
T ss_pred C-----CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Cccccccce
Confidence 4 789999999999999999753210 1122689999999999999999999999 999999999
Q ss_pred CCeeecCCCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccH
Q 040925 671 SNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSL 750 (833)
Q Consensus 671 ~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l 750 (833)
+||++++++.+||+|||.++.+........ .....++..|+|||++.+..++.++|||| +|+++
T Consensus 161 ~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~s----------lG~il 224 (293)
T cd05053 161 RNVLVTEDHVMKIADFGLARDIHHIDYYRK------TTNGRLPVKWMAPEALFDRVYTHQSDVWS----------FGVLL 224 (293)
T ss_pred eeEEEcCCCeEEeCccccccccccccceec------cCCCCCCccccCHHHhccCCcCcccceee----------hhhHH
Confidence 999999999999999999987654321111 11123567899999998888999999999 55666
Q ss_pred HHHHH-HhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhh
Q 040925 751 HEFAK-TALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTR 825 (833)
Q Consensus 751 ~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~ 825 (833)
+++++ +..|+..... .... ....... ....+..++..+.+++.+||..||++|||+.|+++.|+.+.
T Consensus 225 ~el~~~g~~p~~~~~~--~~~~-~~~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 225 WEIFTLGGSPYPGIPV--EELF-KLLKEGY-----RMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHHhcCCCCCCCCCCH--HHHH-HHHHcCC-----cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 66554 4444331110 0000 0000000 00112234567889999999999999999999999998874
No 148
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.4e-34 Score=299.75 Aligned_cols=251 Identities=18% Similarity=0.249 Sum_probs=199.1
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccC-CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeE
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY-KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAF 610 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 610 (833)
+|++.+.||+|+||.||++.+..+++.||+|.++... ....+.+.+|+.++++++||||+++++++.... ..++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~l 75 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADG-----HLYI 75 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECC-----EEEE
Confidence 5888999999999999999999999999999986432 234567889999999999999999999975544 8999
Q ss_pred EEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccc
Q 040925 611 VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690 (833)
Q Consensus 611 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 690 (833)
||||+++|+|.+++...... .+++..++.++.|++.||.|||+. +|+|+||||+||++++++.++++|||.+.
T Consensus 76 v~e~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~ 148 (255)
T cd08219 76 VMEYCDGGDLMQKIKLQRGK----LFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSAR 148 (255)
T ss_pred EEeeCCCCcHHHHHHhccCC----CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcce
Confidence 99999999999988754322 578999999999999999999999 99999999999999999999999999987
Q ss_pred ccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccc
Q 040925 691 FLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSL 770 (833)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~ 770 (833)
....... ......|++.|+|||++.+..++.++|+|| +|+++++++++..|+...... ..
T Consensus 149 ~~~~~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~s----------lG~i~~~l~~g~~p~~~~~~~--~~ 208 (255)
T cd08219 149 LLTSPGA--------YACTYVGTPYYVPPEIWENMPYNNKSDIWS----------LGCILYELCTLKHPFQANSWK--NL 208 (255)
T ss_pred eeccccc--------ccccccCCccccCHHHHccCCcCchhhhhh----------hchhheehhhccCCCCCCCHH--HH
Confidence 6543211 112346899999999998888999999999 677777777877776532211 00
Q ss_pred hhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 771 LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
......... ...+..++..+.+++.+||+.||++|||+.+++.+
T Consensus 209 ~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 209 ILKVCQGSY------KPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHHHhcCCC------CCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 011111100 11122345678899999999999999999999875
No 149
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1e-34 Score=306.85 Aligned_cols=265 Identities=24% Similarity=0.388 Sum_probs=204.6
Q ss_pred cCCccCceeccCcceEEEEEEEC-----CCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCC
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLG-----EDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGT 605 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 605 (833)
++|.+.+.||+|+||.||+|++. .++..+|+|.++.......+.+.+|++++++++||||+++++++...+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 80 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD---- 80 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC----
Confidence 46888999999999999999863 245679999987554444567899999999999999999999976544
Q ss_pred ceEeEEEEecCCCChhhhhccCCCc----------cccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeee
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQ----------VEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLL 675 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll 675 (833)
..++||||+++++|.+++...... .....+++..++.++.|++.|++|||++ +|+||||||+||++
T Consensus 81 -~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~ 156 (291)
T cd05094 81 -PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLV 156 (291)
T ss_pred -ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEE
Confidence 789999999999999999764321 0112488999999999999999999999 99999999999999
Q ss_pred cCCCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH
Q 040925 676 DHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK 755 (833)
Q Consensus 676 ~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~ 755 (833)
+.++.+||+|||++......... .......+++.|+|||++.+..++.++|||| +|++++++++
T Consensus 157 ~~~~~~~l~dfg~a~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s----------lG~il~el~t 220 (291)
T cd05094 157 GANLLVKIGDFGMSRDVYSTDYY------RVGGHTMLPIRWMPPESIMYRKFTTESDVWS----------FGVILWEIFT 220 (291)
T ss_pred ccCCcEEECCCCcccccCCCcee------ecCCCCCcceeecChHHhccCCCCchhhHHH----------HHHHHHHHHh
Confidence 99999999999999765432211 0111234788999999999989999999999 7778888887
Q ss_pred -HhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhhh
Q 040925 756 -TALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRET 827 (833)
Q Consensus 756 -~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~~ 827 (833)
+..|+..... ... .+...... .......++..+.+++.+||+.||++|||+++|++.|+++...
T Consensus 221 ~g~~p~~~~~~--~~~-~~~~~~~~-----~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 221 YGKQPWFQLSN--TEV-IECITQGR-----VLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred CCCCCCCCCCH--HHH-HHHHhCCC-----CCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 7776532111 111 11111110 0011122456789999999999999999999999999998654
No 150
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.3e-34 Score=306.44 Aligned_cols=251 Identities=21% Similarity=0.264 Sum_probs=203.0
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeE
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAF 610 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 610 (833)
.+|++.+.||+|++|.||+|.+..+++.||+|.+........+.+.+|+.+++.++||||+++++++.... ..++
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~-----~~~l 94 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD-----ELWV 94 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC-----EEEE
Confidence 47999999999999999999998899999999997655555677899999999999999999999876544 8999
Q ss_pred EEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccc
Q 040925 611 VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690 (833)
Q Consensus 611 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 690 (833)
||||+++++|.+++... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+.
T Consensus 95 v~e~~~~~~L~~~~~~~-------~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~ 164 (296)
T cd06654 95 VMEYLAGGSLTDVVTET-------CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCA 164 (296)
T ss_pred eecccCCCCHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccch
Confidence 99999999999998643 478899999999999999999999 99999999999999999999999999987
Q ss_pred ccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccc
Q 040925 691 FLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSL 770 (833)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~ 770 (833)
....... ......|++.|+|||.+.+..++.++|||| +|+++++++++..|+......+...
T Consensus 165 ~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s----------~Gvil~~l~~g~~pf~~~~~~~~~~ 226 (296)
T cd06654 165 QITPEQS--------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWS----------LGIMAIEMIEGEPPYLNENPLRALY 226 (296)
T ss_pred hcccccc--------ccCcccCCccccCHHHHcCCCCCccchHHH----------HHHHHHHHHhCCCCCCCCCHHHhHH
Confidence 6533211 111245899999999998888999999999 8888999999998875332211110
Q ss_pred hhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 771 LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
....... .....+...+..+.+++.+||..||++|||++++++.
T Consensus 227 --~~~~~~~----~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 227 --LIATNGT----PELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred --HHhcCCC----CCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 0000000 0001123456678899999999999999999999874
No 151
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=5.2e-35 Score=324.86 Aligned_cols=262 Identities=23% Similarity=0.318 Sum_probs=192.3
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCC---CCc
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFK---GTD 606 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~---~~~ 606 (833)
.++|++.+.||+|+||.||+|.+..+++.||||++... .....+|+.+++.++||||+++++++....+. ...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~----~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD----PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC----cchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 45799999999999999999999989999999988532 23345799999999999999999887543321 223
Q ss_pred eEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCC-cEEEcc
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVCD 685 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kL~D 685 (833)
..++||||+++ ++.+++...... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++ .+||+|
T Consensus 141 ~l~lvmE~~~~-~l~~~~~~~~~~--~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~D 214 (440)
T PTZ00036 141 FLNVVMEFIPQ-TVHKYMKHYARN--NHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCD 214 (440)
T ss_pred EEEEEEecCCc-cHHHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeec
Confidence 57799999974 787777542211 12689999999999999999999999 999999999999998665 799999
Q ss_pred cccccccCcccccccccCCCccccccccccccCccccCCC-CCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccc
Q 040925 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS-EASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVME 764 (833)
Q Consensus 686 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~ 764 (833)
||+|+...... ......||+.|+|||++.+. .++.++|||| +|++++++++|..|+....
T Consensus 215 FGla~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwS----------lGvil~elltG~~pf~~~~ 275 (440)
T PTZ00036 215 FGSAKNLLAGQ---------RSVSYICSRFYRAPELMLGATNYTTHIDLWS----------LGCIIAEMILGYPIFSGQS 275 (440)
T ss_pred cccchhccCCC---------CcccCCCCcCccCHHHhcCCCCCCcHHHHHH----------HHHHHHHHHhCCCCCCCCC
Confidence 99998654321 11234689999999987664 6899999999 7888888888887764221
Q ss_pred cccccch-hhhccc--------------c-----chhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 765 IVDPSLL-MEVMTN--------------N-----SMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 765 ~~~~~~~-~~~~~~--------------~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
..+.-.. ...... . ..........+...+.++.+++.+||.+||.+|||+.|+++.
T Consensus 276 ~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 276 SVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred hHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 1100000 000000 0 000000011112235678899999999999999999999865
No 152
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=5.8e-35 Score=313.51 Aligned_cols=242 Identities=26% Similarity=0.303 Sum_probs=187.5
Q ss_pred ceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHH-HHhhcCCCccceEeeEeecCCCCCCceEeEEE
Q 040925 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECE-ALRNIRHRNLIKIITICSSTDFKGTDFKAFVF 612 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 612 (833)
+.||+|+||.||+|++..+++.||+|++.... ......+..|.. +++.++||||+++++++...+ ..++||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~-----~~~lv~ 75 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD-----KLYFVL 75 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCC-----eEEEEE
Confidence 47999999999999999999999999996432 122234444444 567789999999999876554 899999
Q ss_pred EecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccccc
Q 040925 613 EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL 692 (833)
Q Consensus 613 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 692 (833)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~ 146 (325)
T cd05602 76 DYINGGELFYHLQRER------CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKEN 146 (325)
T ss_pred eCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCccc
Confidence 9999999999997654 578889999999999999999999 9999999999999999999999999998754
Q ss_pred CcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchh
Q 040925 693 SDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLM 772 (833)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~ 772 (833)
.... .......||+.|+|||++.+..++.++|||| .|+++++++++..|+...... ....
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~Diws----------lG~il~el~~g~~pf~~~~~~--~~~~ 206 (325)
T cd05602 147 IEHN--------GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWC----------LGAVLYEMLYGLPPFYSRNTA--EMYD 206 (325)
T ss_pred ccCC--------CCcccccCCccccCHHHHcCCCCCCcccccc----------ccHHHHHHhcCCCCCCCCCHH--HHHH
Confidence 2211 1122356999999999999999999999999 788889999998887522211 1111
Q ss_pred hhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 773 EVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
....... ......+..+.+++.+|++.||.+||++.+.+.
T Consensus 207 ~i~~~~~-------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 207 NILNKPL-------QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred HHHhCCc-------CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 1111111 111234567889999999999999999875443
No 153
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=8.5e-35 Score=316.80 Aligned_cols=261 Identities=17% Similarity=0.226 Sum_probs=200.9
Q ss_pred hHHHHHHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeec
Q 040925 523 YAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSS 599 (833)
Q Consensus 523 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 599 (833)
..++....++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++..
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 4455566789999999999999999999999999999999986421 2233567889999999999999999998755
Q ss_pred CCCCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCC
Q 040925 600 TDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM 679 (833)
Q Consensus 600 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~ 679 (833)
.. ..++||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 115 ~~-----~~~lv~Ey~~gg~L~~~~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~ 179 (371)
T cd05622 115 DR-----YLYMVMEYMPGGDLVNLMSNY-------DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSG 179 (371)
T ss_pred CC-----EEEEEEcCCCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCC
Confidence 44 899999999999999998753 478889999999999999999999 999999999999999999
Q ss_pred cEEEcccccccccCcccccccccCCCccccccccccccCccccCCCC----CCcccccccCCcCCCccccCCccHHHHHH
Q 040925 680 VAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSE----ASMTGDIFTGRRPIDAVFNEGHSLHEFAK 755 (833)
Q Consensus 680 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Di~s~~~~~~~~~~~g~~l~~~~~ 755 (833)
.+||+|||+++....... .......||+.|||||++.+.. ++.++|||| .|+++|++++
T Consensus 180 ~ikL~DfG~a~~~~~~~~-------~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwS----------lGvilyell~ 242 (371)
T cd05622 180 HLKLADFGTCMKMNKEGM-------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWS----------VGVFLYEMLV 242 (371)
T ss_pred CEEEEeCCceeEcCcCCc-------ccccCcccCccccCHHHHhccCCCccCCCccceee----------hhHHHHHHHh
Confidence 999999999986543211 1112356999999999986543 788999999 8899999999
Q ss_pred HhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCC--CCCHHHHHHH
Q 040925 756 TALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFE--RMDMRDVVAK 820 (833)
Q Consensus 756 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~eil~~ 820 (833)
+..|+....... ........... ...+.....+..+.+++..|+..+|.+ ||+++|+++.
T Consensus 243 G~~Pf~~~~~~~--~~~~i~~~~~~---~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 243 GDTPFYADSLVG--TYSKIMNHKNS---LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred CCCCCCCCCHHH--HHHHHHcCCCc---ccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 999976322110 11111111000 001111234567788999999844433 7799998875
No 154
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=4.8e-35 Score=313.29 Aligned_cols=239 Identities=21% Similarity=0.259 Sum_probs=185.8
Q ss_pred ceeccCcceEEEEEEE---CCCceEEEEEEeeccCC--cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEE
Q 040925 537 NMIGQGSFGYVYKGTL---GEDEMIVAVKVINLKYK--GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFV 611 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~---~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 611 (833)
+.||+|+||.||+++. ..+++.||+|+++.... .....+.+|++++++++||||+++++++...+ ..|+|
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~~lv 76 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEG-----KLYLI 76 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCC-----EEEEE
Confidence 6799999999999876 35789999999974321 22345778999999999999999999976554 89999
Q ss_pred EEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccc
Q 040925 612 FEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKF 691 (833)
Q Consensus 612 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 691 (833)
|||+++|+|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 77 ~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 147 (318)
T cd05582 77 LDFLRGGDLFTRLSKEV------MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKE 147 (318)
T ss_pred EcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcc
Confidence 99999999999997643 689999999999999999999999 999999999999999999999999999875
Q ss_pred cCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccch
Q 040925 692 LSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLL 771 (833)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~ 771 (833)
..... .......||+.|+|||++.+..++.++|||| +|+++++++++..|+...+.. ...
T Consensus 148 ~~~~~--------~~~~~~~g~~~y~aPE~~~~~~~~~~~Diws----------lG~il~el~tg~~p~~~~~~~--~~~ 207 (318)
T cd05582 148 SIDHE--------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWS----------FGVLMFEMLTGSLPFQGKDRK--ETM 207 (318)
T ss_pred cCCCC--------CceecccCChhhcCHHHHcCCCCCCccceec----------cceEeeeeccCCCCCCCCCHH--HHH
Confidence 43321 1122356999999999999888999999999 566666666676665422110 111
Q ss_pred hhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHH
Q 040925 772 MEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRD 816 (833)
Q Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~e 816 (833)
........ ..+...++.+.+++.+||+.||++|||+.+
T Consensus 208 ~~i~~~~~-------~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 208 TMILKAKL-------GMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred HHHHcCCC-------CCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 11111110 112234567889999999999999999544
No 155
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.5e-34 Score=307.15 Aligned_cols=263 Identities=26% Similarity=0.384 Sum_probs=198.9
Q ss_pred hcCCccCceeccCcceEEEEEEECCCce--EEEEEEeeccC-CcchhHHHHHHHHHhhc-CCCccceEeeEeecCCCCCC
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEM--IVAVKVINLKY-KGASRSFVAECEALRNI-RHRNLIKIITICSSTDFKGT 605 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 605 (833)
.++|++.+.||+|+||.||+|.+..++. .+|+|.++... ....+.+.+|++++.++ +||||+++++++...+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~---- 81 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG---- 81 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCC----
Confidence 4578999999999999999999876665 45777765332 22345788999999999 8999999999975544
Q ss_pred ceEeEEEEecCCCChhhhhccCCCcc----------ccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeee
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQV----------EVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLL 675 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll 675 (833)
..++||||+++|+|.+++....... ....+++.+++.++.|++.|++|||+. ||+||||||+||++
T Consensus 82 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili 157 (303)
T cd05088 82 -YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILV 157 (303)
T ss_pred -CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEe
Confidence 7899999999999999997543110 112578999999999999999999999 99999999999999
Q ss_pred cCCCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH
Q 040925 676 DHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK 755 (833)
Q Consensus 676 ~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~ 755 (833)
+.++.+||+|||++....... ......++..|+|||++.+..++.++|||| +|++++++++
T Consensus 158 ~~~~~~kl~dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s----------lG~il~ellt 218 (303)
T cd05088 158 GENYVAKIADFGLSRGQEVYV---------KKTMGRLPVRWMAIESLNYSVYTTNSDVWS----------YGVLLWEIVS 218 (303)
T ss_pred cCCCcEEeCccccCcccchhh---------hcccCCCcccccCHHHHhccCCcccccchh----------hhhHHHHHHh
Confidence 999999999999986322110 001112467899999998888999999999 7888888887
Q ss_pred -HhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhhh
Q 040925 756 -TALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRET 827 (833)
Q Consensus 756 -~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~~ 827 (833)
+..|+......+ . ........ ....+..++..+.+++.+||+.+|++||+++++++.+..+.+.
T Consensus 219 ~g~~p~~~~~~~~--~-~~~~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~ 283 (303)
T cd05088 219 LGGTPYCGMTCAE--L-YEKLPQGY-----RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 283 (303)
T ss_pred cCCCCcccCChHH--H-HHHHhcCC-----cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 776654221111 0 00010000 0001122455788999999999999999999999999887654
No 156
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-35 Score=283.00 Aligned_cols=257 Identities=23% Similarity=0.254 Sum_probs=211.9
Q ss_pred HhcCCccC-ceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhc-CCCccceEeeEeecCCCCCCc
Q 040925 529 ATGEFSSS-NMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNI-RHRNLIKIITICSSTDFKGTD 606 (833)
Q Consensus 529 ~~~~y~~~-~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 606 (833)
.+++|++. ++||-|-.|.|-.+.++.+|+.+|+|++. +....++|++..-.. .|||||.+++++... +.+..
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~-----Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs-~~~rk 132 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLL-----DSPKARREVELHWMASGHPHIVSIIDVYENS-YQGRK 132 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHh-----cCHHHHhHhhhhhhhcCCCceEEeehhhhhh-ccCce
Confidence 45677765 57999999999999999999999999985 345678899886666 599999999997654 67788
Q ss_pred eEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecC---CCcEEE
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDH---DMVAHV 683 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kL 683 (833)
...+|||.++||.|...+.+++.. .+++.++..|+.||+.|+.|||+. +|.||||||+|+|... +..+||
T Consensus 133 cLLiVmE~meGGeLfsriq~~g~~----afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKL 205 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRGDQ----AFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKL 205 (400)
T ss_pred eeEeeeecccchHHHHHHHHcccc----cchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEe
Confidence 899999999999999999988755 799999999999999999999999 9999999999999964 458999
Q ss_pred cccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCc--
Q 040925 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEK-- 761 (833)
Q Consensus 684 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~-- 761 (833)
+|||+|+..... ......+-||+|.|||++...+|+...|+|| .|+++|-++-|..|+-
T Consensus 206 tDfGFAK~t~~~---------~~L~TPc~TPyYvaPevlg~eKydkscdmwS----------lgVimYIlLCGyPPFYS~ 266 (400)
T KOG0604|consen 206 TDFGFAKETQEP---------GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWS----------LGVIMYILLCGYPPFYSN 266 (400)
T ss_pred cccccccccCCC---------ccccCCcccccccCHHHhCchhcCCCCCccc----------hhHHHHHhhcCCCccccc
Confidence 999999865432 1223356899999999999999999999999 7788888888888864
Q ss_pred ccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 762 VMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 762 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
-...+.|.+........+.+ +.+..+.+++...++|+..|..+|.+|.|+.|+++.
T Consensus 267 hg~aispgMk~rI~~gqy~F---P~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 267 HGLAISPGMKRRIRTGQYEF---PEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred CCccCChhHHhHhhccCccC---CChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 33455666655555544432 233455678889999999999999999999998764
No 157
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=8.8e-35 Score=304.49 Aligned_cols=259 Identities=22% Similarity=0.336 Sum_probs=201.8
Q ss_pred HHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhc-CCCccceEeeEeecCCCCC-C
Q 040925 528 KATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNI-RHRNLIKIITICSSTDFKG-T 605 (833)
Q Consensus 528 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~-~ 605 (833)
.+.+.|++.+.||+|+||.||+|....+++.||+|.+.... .....+..|+.+++++ +||||+++++++......+ .
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 45678999999999999999999999899999999987443 3446788999999999 6999999999986543221 3
Q ss_pred ceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcc
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 685 (833)
...++||||+++|+|.+++...... .+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~----~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~D 154 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGN----TLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVD 154 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCC----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEcc
Confidence 4689999999999999999864322 688999999999999999999999 999999999999999999999999
Q ss_pred cccccccCcccccccccCCCccccccccccccCccccC-----CCCCCcccccccCCcCCCccccCCccHHHHHHHhCCC
Q 040925 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGM-----GSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPE 760 (833)
Q Consensus 686 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~ 760 (833)
||++........ ......|++.|+|||++. +..++.++|||| .|+++++++++..|+
T Consensus 155 fg~~~~~~~~~~--------~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~s----------lGv~l~el~~g~~p~ 216 (272)
T cd06637 155 FGVSAQLDRTVG--------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWS----------LGITAIEMAEGAPPL 216 (272)
T ss_pred CCCceecccccc--------cCCcccccccccCHhHhccccCcCCCCCchhhHHH----------HHHHHHHHHhCCCCc
Confidence 999876533211 112346899999999875 345888999999 788888988888876
Q ss_pred cccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 761 KVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
........... .... .........++..+.+++.+||..||.+|||++|+++
T Consensus 217 ~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 217 CDMHPMRALFL--IPRN-----PAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred cccCHHHHHHH--HhcC-----CCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 42221111110 0000 0011111234567889999999999999999999976
No 158
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.7e-34 Score=299.43 Aligned_cols=251 Identities=23% Similarity=0.311 Sum_probs=202.6
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeecc--CCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK--YKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
+|++.+.||+|++|.||+|++..+++.||+|.+... .....+.+.+|++++++++||||+++++++...+ ..+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 75 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKG-----KLN 75 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCC-----EEE
Confidence 478889999999999999999999999999998643 2334567889999999999999999999975544 899
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||+++++|.+++...... .+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||++
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~----~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~ 148 (256)
T cd08529 76 IVMEYAENGDLHKLLKMQRGR----PLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVA 148 (256)
T ss_pred EEEEeCCCCcHHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccc
Confidence 999999999999999865322 689999999999999999999999 9999999999999999999999999998
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPS 769 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~ 769 (833)
+....... ......|++.|+|||+..+..++.++|+|| +|+++++++++..|+.... ...
T Consensus 149 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s----------lG~il~~l~~g~~p~~~~~--~~~ 208 (256)
T cd08529 149 KLLSDNTN--------FANTIVGTPYYLSPELCEDKPYNEKSDVWA----------LGVVLYECCTGKHPFDANN--QGA 208 (256)
T ss_pred eeccCccc--------hhhccccCccccCHHHhcCCCCCCccchHH----------HHHHHHHHHhCCCCCCCCC--HHH
Confidence 86654221 112245889999999999888999999999 8888999999988875322 111
Q ss_pred chhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 770 LLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.......... ......++..+.+++.+||+.+|++||++.++++.
T Consensus 209 ~~~~~~~~~~------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 209 LILKIIRGVF------PPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred HHHHHHcCCC------CCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 1111111110 11122456788999999999999999999999864
No 159
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.8e-34 Score=299.93 Aligned_cols=255 Identities=27% Similarity=0.435 Sum_probs=198.6
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
.++|++.++||+|++|.||+|++.++ ..||+|.++... ...+.+.+|++++++++||||+++++++.. ...+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~------~~~~ 76 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPIY 76 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEECC------CCcE
Confidence 45799999999999999999998755 469999987432 234678999999999999999999987532 2578
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||+++|+|.+++...... .+++..+..++.|+++||+|+|+. +++||||||+||++++++.+||+|||.+
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~----~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~ 149 (262)
T cd05071 77 IVTEYMSKGSLLDFLKGEMGK----YLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLA 149 (262)
T ss_pred EEEEcCCCCcHHHHHhhcccc----CCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCce
Confidence 999999999999999764321 578999999999999999999999 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCcccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEIVDP 768 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~~~~ 768 (833)
+......... .....++..|+|||+..+..++.++|||| +|++++++++ +..|+.... +.
T Consensus 150 ~~~~~~~~~~-------~~~~~~~~~y~~PE~~~~~~~~~~~Dvws----------lG~~l~ellt~g~~p~~~~~--~~ 210 (262)
T cd05071 150 RLIEDNEYTA-------RQGAKFPIKWTAPEAALYGRFTIKSDVWS----------FGILLTELTTKGRVPYPGMV--NR 210 (262)
T ss_pred eecccccccc-------ccCCcccceecCHhHhccCCCCchhhHHH----------HHHHHHHHHcCCCCCCCCCC--hH
Confidence 8664332111 11234678899999998888999999999 7778888887 555553211 11
Q ss_pred cchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 040925 769 SLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHT 824 (833)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i 824 (833)
... ....... ......+++..+.+++.+||+.||++|||+.++++.|+..
T Consensus 211 ~~~-~~~~~~~-----~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 211 EVL-DQVERGY-----RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred HHH-HHHhcCC-----CCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 111 1110000 0111234667889999999999999999999999998864
No 160
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.1e-34 Score=300.70 Aligned_cols=251 Identities=26% Similarity=0.406 Sum_probs=194.9
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeE
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAF 610 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 610 (833)
.+|++.+.||+|++|.||+|.++ ++..+|+|.+.... ...+.+.+|++++++++||||+++++++...+ ..++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~l 76 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQR-----PIFI 76 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC-----ceEE
Confidence 35889999999999999999986 56789999986432 23457888999999999999999999875444 7899
Q ss_pred EEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccc
Q 040925 611 VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690 (833)
Q Consensus 611 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 690 (833)
||||+++++|.+++..... .+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.++
T Consensus 77 v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~ 148 (256)
T cd05059 77 VTEYMANGCLLNYLRERKG-----KLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLAR 148 (256)
T ss_pred EEecCCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccce
Confidence 9999999999999976432 589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCccccccccc
Q 040925 691 FLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEIVDPS 769 (833)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~~~~~ 769 (833)
......... .....++..|+|||++.+..++.++|||| +|++++++++ +..|+..... ..
T Consensus 149 ~~~~~~~~~-------~~~~~~~~~y~~Pe~~~~~~~~~~~Di~s----------lG~il~~l~~~g~~p~~~~~~--~~ 209 (256)
T cd05059 149 YVLDDQYTS-------SQGTKFPVKWAPPEVFDYSRFSSKSDVWS----------FGVLMWEVFSEGKMPYERFSN--SE 209 (256)
T ss_pred ecccccccc-------cCCCCCCccccCHHHhccCCCCchhhHHH----------HHHHHHHHhccCCCCCCCCCH--HH
Confidence 654322111 11122456899999999889999999999 6777778776 5666542211 11
Q ss_pred chhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 040925 770 LLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKL 821 (833)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 821 (833)
.... ...... ...+..++.++.+++.+||..+|++|||+.|+++.|
T Consensus 210 ~~~~-~~~~~~-----~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 210 VVES-VSAGYR-----LYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred HHHH-HHcCCc-----CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 1111 111000 011122466899999999999999999999999876
No 161
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=9.3e-35 Score=316.49 Aligned_cols=258 Identities=20% Similarity=0.228 Sum_probs=193.6
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
++|++.+.||+|+||.||+|+...+++.||+|+++... ......+.+|+.++..++||+|+++++.+.... .
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~-----~ 75 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKR-----N 75 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC-----E
Confidence 46899999999999999999999999999999997432 233457888999999999999999999865544 8
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.|+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG 146 (360)
T cd05627 76 LYLIMEFLPGGDMMTLLMKKD------TLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFG 146 (360)
T ss_pred EEEEEeCCCCccHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeecc
Confidence 999999999999999997654 689999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccc---------------------------cCCCccccccccccccCccccCCCCCCcccccccCCcCC
Q 040925 688 LAKFLSDHQLDTAV---------------------------KTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPI 740 (833)
Q Consensus 688 ~a~~~~~~~~~~~~---------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~ 740 (833)
+++........... .........+||+.|+|||++.+..++.++||||
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwS----- 221 (360)
T cd05627 147 LCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWS----- 221 (360)
T ss_pred CCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceecc-----
Confidence 98755321110000 0001112457999999999999999999999999
Q ss_pred CccccCCccHHHHHHHhCCCcccccccccchhhhcc--ccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCC---HH
Q 040925 741 DAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMT--NNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMD---MR 815 (833)
Q Consensus 741 ~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt---~~ 815 (833)
.|+++|++++|..|+...... ........ .....+ .. ....+.+.+++.+|+ .||.+|++ ++
T Consensus 222 -----lGvilyel~tG~~Pf~~~~~~--~~~~~i~~~~~~~~~p-~~----~~~s~~~~~li~~l~-~~p~~R~~~~~~~ 288 (360)
T cd05627 222 -----LGVIMYEMLIGYPPFCSETPQ--ETYRKVMNWKETLVFP-PE----VPISEKAKDLILRFC-TDSENRIGSNGVE 288 (360)
T ss_pred -----ccceeeecccCCCCCCCCCHH--HHHHHHHcCCCceecC-CC----CCCCHHHHHHHHHhc-cChhhcCCCCCHH
Confidence 677777777877776422111 00011110 000000 00 012445677777766 49999995 56
Q ss_pred HHHHH
Q 040925 816 DVVAK 820 (833)
Q Consensus 816 eil~~ 820 (833)
|+++.
T Consensus 289 ei~~h 293 (360)
T cd05627 289 EIKSH 293 (360)
T ss_pred HHhcC
Confidence 66554
No 162
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=7e-35 Score=312.88 Aligned_cols=242 Identities=24% Similarity=0.281 Sum_probs=186.4
Q ss_pred ceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHH-HHhhcCCCccceEeeEeecCCCCCCceEeEEE
Q 040925 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECE-ALRNIRHRNLIKIITICSSTDFKGTDFKAFVF 612 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 612 (833)
+.||+|+||+||+|++..+++.||+|+++... ......+..|.. +++.++||||+++++++...+ ..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~-----~~~lv~ 75 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTE-----KLYFVL 75 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCC-----EEEEEE
Confidence 46999999999999999999999999996432 223344555555 467789999999999875544 899999
Q ss_pred EecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccccc
Q 040925 613 EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL 692 (833)
Q Consensus 613 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 692 (833)
||+++|+|.+++.... .+++.++..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~ 146 (325)
T cd05604 76 DFVNGGELFFHLQRER------SFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (325)
T ss_pred cCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccC
Confidence 9999999999887654 689999999999999999999999 9999999999999999999999999998743
Q ss_pred CcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchh
Q 040925 693 SDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLM 772 (833)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~ 772 (833)
.... .......||+.|+|||++.+..++.++|||| +|++++++++|..|+...+.. ....
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws----------lG~il~el~~G~~pf~~~~~~--~~~~ 206 (325)
T cd05604 147 IAQS--------DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWC----------LGAVLYEMLYGLPPFYCRDVA--EMYD 206 (325)
T ss_pred CCCC--------CCcccccCChhhCCHHHHcCCCCCCcCcccc----------ccceehhhhcCCCCCCCCCHH--HHHH
Confidence 2211 1122356999999999999999999999999 777788888888876532211 1111
Q ss_pred hhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 773 EVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
........ .....+..+.+++.+|+..||.+||++++.++
T Consensus 207 ~~~~~~~~-------~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~ 246 (325)
T cd05604 207 NILHKPLV-------LRPGASLTAWSILEELLEKDRQRRLGAKEDFL 246 (325)
T ss_pred HHHcCCcc-------CCCCCCHHHHHHHHHHhccCHHhcCCCCCCHH
Confidence 11111110 11123456788999999999999998864433
No 163
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.5e-34 Score=313.20 Aligned_cols=262 Identities=19% Similarity=0.246 Sum_probs=196.9
Q ss_pred HHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC--CcchhHHHHHHHHHhhcCCCccceEeeEeecCC-CCC
Q 040925 528 KATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVAECEALRNIRHRNLIKIITICSSTD-FKG 604 (833)
Q Consensus 528 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~ 604 (833)
...++|++.+.||+|+||.||+|.+..+++.||+|++.... ......+.+|+.+++.++||||+++++++.... ...
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 34578999999999999999999999899999999996432 233467889999999999999999999875443 122
Q ss_pred CceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEc
Q 040925 605 TDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVC 684 (833)
Q Consensus 605 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 684 (833)
....|+||||+++ ++.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 98 ~~~~~lv~e~~~~-~l~~~~~~--------~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~ 165 (359)
T cd07876 98 FQDVYLVMELMDA-NLCQVIHM--------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 165 (359)
T ss_pred cceeEEEEeCCCc-CHHHHHhc--------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEe
Confidence 2457999999975 67776642 478889999999999999999999 99999999999999999999999
Q ss_pred ccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccc
Q 040925 685 DFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVME 764 (833)
Q Consensus 685 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~ 764 (833)
|||+++...... ......||+.|+|||++.+..++.++|||| .|+++++++++..|+...+
T Consensus 166 Dfg~a~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwS----------lG~il~el~tg~~pf~~~~ 226 (359)
T cd07876 166 DFGLARTACTNF---------MMTPYVVTRYYRAPEVILGMGYKENVDIWS----------VGCIMGELVKGSVIFQGTD 226 (359)
T ss_pred cCCCccccccCc---------cCCCCcccCCCCCchhccCCCCCcchhhHH----------HHHHHHHHHhCCCCCCCCC
Confidence 999997543221 112346899999999999999999999999 7788888888888775322
Q ss_pred ccccc-------------c-------hhhhccccchhh-------------hhhhhchHHHHHHHHHHhhccCCCCCCCC
Q 040925 765 IVDPS-------------L-------LMEVMTNNSMIQ-------------EDKRVKTEECLNAIIRTGVLCSMESPFER 811 (833)
Q Consensus 765 ~~~~~-------------~-------~~~~~~~~~~~~-------------~~~~~~~~~~~~~l~~li~~cl~~dP~~R 811 (833)
..+.- . ............ +............+.+++.+||..||++|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R 306 (359)
T cd07876 227 HIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKR 306 (359)
T ss_pred HHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccC
Confidence 11100 0 000000000000 00000001123567899999999999999
Q ss_pred CCHHHHHHH
Q 040925 812 MDMRDVVAK 820 (833)
Q Consensus 812 Pt~~eil~~ 820 (833)
||+.|+++.
T Consensus 307 ~t~~e~l~h 315 (359)
T cd07876 307 ISVDEALRH 315 (359)
T ss_pred CCHHHHhcC
Confidence 999999875
No 164
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.1e-34 Score=311.27 Aligned_cols=240 Identities=23% Similarity=0.266 Sum_probs=189.1
Q ss_pred ceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhc-CCCccceEeeEeecCCCCCCceEeEEE
Q 040925 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNI-RHRNLIKIITICSSTDFKGTDFKAFVF 612 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 612 (833)
+.||+|+||.||+|+...+++.||+|+++... ....+.+.+|+.++.++ +||+|+++++++.... ..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~-----~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTS-----RLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCC-----EEEEEE
Confidence 47999999999999999999999999997542 22345688899999998 5999999999865544 899999
Q ss_pred EecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccccc
Q 040925 613 EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL 692 (833)
Q Consensus 613 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 692 (833)
||+++|+|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~~~~~~------~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~ 146 (327)
T cd05617 76 EYVNGGDLMFHMQRQR------KLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEG 146 (327)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceec
Confidence 9999999999887654 689999999999999999999999 9999999999999999999999999998743
Q ss_pred CcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccc-c--c-
Q 040925 693 SDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIV-D--P- 768 (833)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~-~--~- 768 (833)
.... .......||+.|+|||++.+..++.++|||| +|+++++++++..|+...... + .
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~Diws----------lGvil~ell~g~~pf~~~~~~~~~~~~ 208 (327)
T cd05617 147 LGPG--------DTTSTFCGTPNYIAPEILRGEEYGFSVDWWA----------LGVLMFEMMAGRSPFDIITDNPDMNTE 208 (327)
T ss_pred cCCC--------CceecccCCcccCCHHHHCCCCCCchheeeh----------hHHHHHHHHhCCCCCCccCCCcccccH
Confidence 2211 1112356999999999999999999999999 888999999999987522110 0 0
Q ss_pred cchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCH
Q 040925 769 SLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDM 814 (833)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 814 (833)
.......... ....+...+..+.+++.+||+.||++||++
T Consensus 209 ~~~~~~~~~~------~~~~p~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 209 DYLFQVILEK------PIRIPRFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred HHHHHHHHhC------CCCCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 0001110000 001122345567899999999999999985
No 165
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=2.1e-34 Score=306.80 Aligned_cols=257 Identities=23% Similarity=0.336 Sum_probs=198.0
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCc-chhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG-ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
++|++.+.||+|+||.||+|.+..++..||+|.++..... ....+.+|++++++++||||+++++++...+ ..+
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~ 75 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDG-----EIS 75 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC-----EEE
Confidence 3699999999999999999999999999999998754322 3356889999999999999999999976554 899
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||+++++|.+++.... .+++..+..++.|++.||.|||+.. +++||||||+||+++.++.+||+|||++
T Consensus 76 lv~ey~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~ 147 (308)
T cd06615 76 ICMEHMDGGSLDQVLKKAG------RIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVS 147 (308)
T ss_pred EEeeccCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCc
Confidence 9999999999999997654 6889999999999999999999732 8999999999999999999999999998
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPS 769 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~ 769 (833)
....... .....|++.|+|||++.+..++.++|||| +|+++++++++..|+...+..+..
T Consensus 148 ~~~~~~~----------~~~~~~~~~~~aPE~~~~~~~~~~~Diws----------lG~~l~~l~~g~~p~~~~~~~~~~ 207 (308)
T cd06615 148 GQLIDSM----------ANSFVGTRSYMSPERLQGTHYTVQSDIWS----------LGLSLVEMAIGRYPIPPPDAKELE 207 (308)
T ss_pred ccccccc----------cccCCCCcCccChhHhcCCCCCccchHHH----------HHHHHHHHHhCCCCCCCcchhhHH
Confidence 7543321 12246899999999998888999999999 777788888887775321100000
Q ss_pred chhhhccccc-----------------------------hhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 770 LLMEVMTNNS-----------------------------MIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 770 ~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.......... ............++..+.+++.+||..||++|||++|+++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 208 AMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred HhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000000000 00000000011245678999999999999999999999877
No 166
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=9.8e-35 Score=303.20 Aligned_cols=254 Identities=21% Similarity=0.273 Sum_probs=197.9
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
.++|++.+.||+|+||.||+|++..+++.||+|.++.........+.+|+.+++.++||||+++++++...+ ..+
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~-----~~~ 82 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRD-----KLW 82 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC-----EEE
Confidence 347888999999999999999999899999999997654445567889999999999999999999876554 889
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||+++++|.+++...+ .+++.+++.++.|++.|+.|||+. +++|+||||+||+++.++.+||+|||.+
T Consensus 83 lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~ 153 (267)
T cd06645 83 ICMEFCGGGSLQDIYHVTG------PLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVS 153 (267)
T ss_pred EEEeccCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceee
Confidence 9999999999999987654 689999999999999999999999 9999999999999999999999999998
Q ss_pred cccCcccccccccCCCccccccccccccCccccC---CCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGM---GSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIV 766 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~ 766 (833)
........ ......|++.|+|||++. ...++.++|+|| .|++++++.++..|+......
T Consensus 154 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwS----------lG~il~~l~~~~~p~~~~~~~ 215 (267)
T cd06645 154 AQITATIA--------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWA----------VGITAIELAELQPPMFDLHPM 215 (267)
T ss_pred eEccCccc--------ccccccCcccccChhhhccccCCCCCchhhhHH----------HHHHHHHHhcCCCCcccccch
Confidence 75533211 112346899999999874 456889999999 778888888887775421110
Q ss_pred cccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 767 DPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
.... ........ +........++..+.+++.+||..||++|||++++++
T Consensus 216 ~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 216 RALF--LMTKSNFQ--PPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred hhHH--hhhccCCC--CCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 0000 00000000 0000011123456789999999999999999999875
No 167
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.4e-34 Score=306.49 Aligned_cols=266 Identities=21% Similarity=0.317 Sum_probs=194.5
Q ss_pred cCCccCceeccCcceEEEEEEECCC--------------ceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEee
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGED--------------EMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIIT 595 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~--------------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~ 595 (833)
++|++.+.||+|+||.||+|+..++ ...||+|.++.... .....+.+|++++++++||||+++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 5799999999999999999987543 23589999875422 23457899999999999999999999
Q ss_pred EeecCCCCCCceEeEEEEecCCCChhhhhccCCCc------cccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCC
Q 040925 596 ICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQ------VEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLK 669 (833)
Q Consensus 596 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlk 669 (833)
++.... ..++||||+++++|.+++...... .....+++..++.++.|++.||+|||+. +++|||||
T Consensus 85 ~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlk 156 (295)
T cd05097 85 VCVSDD-----PLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLA 156 (295)
T ss_pred EEcCCC-----ccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccC
Confidence 976544 789999999999999998653211 0112468899999999999999999999 99999999
Q ss_pred CCCeeecCCCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCcc
Q 040925 670 PSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHS 749 (833)
Q Consensus 670 p~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~ 749 (833)
|+||++++++.+||+|||++.......... ......+++.|+|||+..+..++.++|||| +|++
T Consensus 157 p~Nill~~~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwS----------lG~~ 220 (295)
T cd05097 157 TRNCLVGNHYTIKIADFGMSRNLYSGDYYR------IQGRAVLPIRWMAWESILLGKFTTASDVWA----------FGVT 220 (295)
T ss_pred hhhEEEcCCCcEEecccccccccccCccee------ccCcCcCceeecChhhhccCCcCchhhHHH----------HHHH
Confidence 999999999999999999997653321110 111234578899999998888999999999 6777
Q ss_pred HHHHHHH--hCCCcccccccccchhhhccccc-hhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 040925 750 LHEFAKT--ALPEKVMEIVDPSLLMEVMTNNS-MIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLC 822 (833)
Q Consensus 750 l~~~~~~--~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 822 (833)
++++.+. ..|+.... ............. ............++..+.+++.+||..||++|||+++|++.|+
T Consensus 221 l~el~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 221 LWEMFTLCKEQPYSLLS--DEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHHHHcCCCCCCcccC--hHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 7777663 33432111 0111000000000 0000000011224568999999999999999999999999886
No 168
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=3.5e-34 Score=301.78 Aligned_cols=262 Identities=24% Similarity=0.391 Sum_probs=196.2
Q ss_pred CCccCceeccCcceEEEEEEE----CCCceEEEEEEeeccC-CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCc
Q 040925 532 EFSSSNMIGQGSFGYVYKGTL----GEDEMIVAVKVINLKY-KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTD 606 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 606 (833)
-|++.+.||+|+||.||+|++ ..++..||+|.++... ....+.+.+|++++++++||||+++++++...+ ..
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---~~ 81 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG---GN 81 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCC---CC
Confidence 478899999999999999985 3468899999987443 233467899999999999999999999876542 34
Q ss_pred eEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccc
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDF 686 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 686 (833)
..++||||+++++|.+++..... .+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+||
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~~~-----~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~df 153 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRNKN-----KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDF 153 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCC
Confidence 68999999999999999865431 589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcc----
Q 040925 687 GLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKV---- 762 (833)
Q Consensus 687 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~---- 762 (833)
|+++......... .......|+..|+|||+..+..++.++|||| +|++++++.++..+...
T Consensus 154 g~~~~~~~~~~~~-----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~s----------lG~il~ellt~~~~~~~~~~~ 218 (284)
T cd05079 154 GLTKAIETDKEYY-----TVKDDLDSPVFWYAPECLIQSKFYIASDVWS----------FGVTLYELLTYCDSESSPMTL 218 (284)
T ss_pred ccccccccCccce-----eecCCCCCCccccCHHHhccCCCCccccchh----------hhhhhhhhhcCCCCCccccch
Confidence 9998664322110 0111245778899999998888999999999 55555555553332210
Q ss_pred -cccccc---c----chhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 040925 763 -MEIVDP---S----LLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHT 824 (833)
Q Consensus 763 -~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i 824 (833)
.....+ . ......... ........++..+.+++.+||+.||++|||++++++.++.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 219 FLKMIGPTHGQMTVTRLVRVLEEG-----KRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred hhhhcccccccccHHHHHHHHHcC-----ccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 000000 0 000000000 00111223567899999999999999999999999999876
No 169
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=2.3e-34 Score=299.09 Aligned_cols=254 Identities=26% Similarity=0.446 Sum_probs=197.9
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
.++|++.+.||+|++|.||+|... ++..||+|.++.... ..+.+.+|+.++++++||+++++++++.. ...+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~------~~~~ 76 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSE------EPIY 76 (260)
T ss_pred hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECC------CCcE
Confidence 357999999999999999999886 566799999875432 34678999999999999999999998632 2478
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
++|||+++++|.+++...... .+++.+++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||.+
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~----~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~ 149 (260)
T cd05070 77 IVTEYMSKGSLLDFLKDGEGR----ALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLA 149 (260)
T ss_pred EEEEecCCCcHHHHHHhcCCC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceee
Confidence 999999999999999764322 589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCcccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEIVDP 768 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~~~~ 768 (833)
.......... .....++..|+|||+..+..++.++|||| +|++++++++ +..|+......
T Consensus 150 ~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~s----------lG~~l~~l~~~g~~p~~~~~~~-- 210 (260)
T cd05070 150 RLIEDNEYTA-------RQGAKFPIKWTAPEAALYGRFTIKSDVWS----------FGILLTELVTKGRVPYPGMNNR-- 210 (260)
T ss_pred eeccCccccc-------ccCCCCCccccChHHHhcCCCcchhhhHH----------HHHHHHHHHhcCCCCCCCCCHH--
Confidence 7654322111 11223567899999998888999999999 7788888887 66665422111
Q ss_pred cchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 040925 769 SLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCH 823 (833)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 823 (833)
... +.+.... ....+.+.+..+.+++.+||..||++|||++++.+.|+.
T Consensus 211 ~~~-~~~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 211 EVL-EQVERGY-----RMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HHH-HHHHcCC-----CCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 111 1111100 011123456678999999999999999999999988864
No 170
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=2.5e-34 Score=299.47 Aligned_cols=254 Identities=20% Similarity=0.283 Sum_probs=201.1
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC-----cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCC
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-----GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGT 605 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 605 (833)
++|++.+.||+|++|.||+|....+++.||+|.++.... ...+.+.+|++++++++||||+++++++...+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---- 77 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDE---- 77 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCC----
Confidence 479999999999999999999988999999999864321 12356888999999999999999999975544
Q ss_pred ceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcc
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 685 (833)
..++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.++|+|
T Consensus 78 -~~~~v~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~d 147 (263)
T cd06625 78 -TLSIFMEYMPGGSVKDQLKAYG------ALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGD 147 (263)
T ss_pred -eEEEEEEECCCCcHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEee
Confidence 8999999999999999997654 688999999999999999999999 999999999999999999999999
Q ss_pred cccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccc
Q 040925 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEI 765 (833)
Q Consensus 686 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~ 765 (833)
||+++......... .......|+..|+|||++.+..++.++|||| .|+++++++++..|+...+.
T Consensus 148 fg~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s----------lG~il~el~~g~~p~~~~~~ 212 (263)
T cd06625 148 FGASKRLQTICSSG-----TGMKSVTGTPYWMSPEVISGEGYGRKADVWS----------VGCTVVEMLTEKPPWAEFEA 212 (263)
T ss_pred cccceecccccccc-----ccccCCCcCccccCcceeccCCCCchhhhHH----------HHHHHHHHHhCCCCccccch
Confidence 99987654321111 0112245889999999999988999999999 78889999998888643221
Q ss_pred ccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 766 VDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
..... ..... ......+..++..+.+++.+||..+|++|||+.|+++.
T Consensus 213 ~~~~~--~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 213 MAAIF--KIATQ-----PTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred HHHHH--HHhcc-----CCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 11100 00000 00111223456678899999999999999999999864
No 171
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.4e-34 Score=305.44 Aligned_cols=270 Identities=20% Similarity=0.258 Sum_probs=206.0
Q ss_pred cchHHHHHHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhc-CCCccceEeeEeec
Q 040925 521 VSYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNI-RHRNLIKIITICSS 599 (833)
Q Consensus 521 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 599 (833)
+.++.+..+.++|++.+.||+|+||.||+|.+..+++.||+|+++.. ......+.+|+.+++++ +||||+++++++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI-HDIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccc-cchHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 45566777888999999999999999999999989999999988642 22345688899999999 69999999998865
Q ss_pred CCCCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCC
Q 040925 600 TDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM 679 (833)
Q Consensus 600 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~ 679 (833)
.........++||||+++|+|.+++...... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~ 161 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKR--GERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEG 161 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhcc--CccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCC
Confidence 4444556799999999999999987643211 12588999999999999999999999 999999999999999999
Q ss_pred cEEEcccccccccCcccccccccCCCccccccccccccCccccC-----CCCCCcccccccCCcCCCccccCCccHHHHH
Q 040925 680 VAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGM-----GSEASMTGDIFTGRRPIDAVFNEGHSLHEFA 754 (833)
Q Consensus 680 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~ 754 (833)
.+||+|||+++....... ......|++.|+|||++. +..++.++|||| .|++++++.
T Consensus 162 ~~kl~dfg~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~s----------lGvi~~el~ 223 (286)
T cd06638 162 GVKLVDFGVSAQLTSTRL--------RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWS----------LGITAIELG 223 (286)
T ss_pred CEEEccCCceeecccCCC--------ccccccCCCcccChhhhchhhhccccccchhhhhh----------HHHHHHHHh
Confidence 999999999876543211 112245899999999875 345788999999 778888888
Q ss_pred HHhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 755 KTALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 755 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
++..|+....... ......... ......+..++..+.+++.+||+.||++|||+.|+++.
T Consensus 224 ~g~~p~~~~~~~~--~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 224 DGDPPLADLHPMR--ALFKIPRNP----PPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred cCCCCCCCCchhH--HHhhccccC----CCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 8887764221111 000000000 00001112234578899999999999999999999875
No 172
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=2.5e-34 Score=304.83 Aligned_cols=264 Identities=24% Similarity=0.356 Sum_probs=200.1
Q ss_pred cCCccCceeccCcceEEEEEEECCCce--EEEEEEeeccC-CcchhHHHHHHHHHhhc-CCCccceEeeEeecCCCCCCc
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEM--IVAVKVINLKY-KGASRSFVAECEALRNI-RHRNLIKIITICSSTDFKGTD 606 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 606 (833)
++|++.+.||+|+||.||+|....++. .+|+|.++... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~----- 76 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRG----- 76 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCC-----
Confidence 579999999999999999999876654 46888886322 22346788999999999 7999999999975544
Q ss_pred eEeEEEEecCCCChhhhhccCCCc----------cccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeec
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQ----------VEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLD 676 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~ 676 (833)
..++||||+++|+|.+++...... .....+++..++.++.|++.||+|||+. +|+||||||+||+++
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~ 153 (297)
T cd05089 77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVG 153 (297)
T ss_pred cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEEC
Confidence 789999999999999999764311 0112588999999999999999999999 999999999999999
Q ss_pred CCCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-
Q 040925 677 HDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK- 755 (833)
Q Consensus 677 ~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~- 755 (833)
+++.+||+|||++........ ......+..|+|||+..+..++.++|||| +|++++++++
T Consensus 154 ~~~~~kl~dfg~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~DvwS----------lG~il~el~t~ 214 (297)
T cd05089 154 ENLASKIADFGLSRGEEVYVK---------KTMGRLPVRWMAIESLNYSVYTTKSDVWS----------FGVLLWEIVSL 214 (297)
T ss_pred CCCeEEECCcCCCccccceec---------cCCCCcCccccCchhhccCCCCchhhHHH----------HHHHHHHHHcC
Confidence 999999999999864321100 00112356799999998888999999999 7778888876
Q ss_pred HhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhhhhh
Q 040925 756 TALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRETFL 829 (833)
Q Consensus 756 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~~~~ 829 (833)
+..|+...... ......... . ....+..++..+.+++.+||..+|.+|||++++++.|+.+.+...
T Consensus 215 g~~pf~~~~~~--~~~~~~~~~-~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~ 280 (297)
T cd05089 215 GGTPYCGMTCA--ELYEKLPQG-Y-----RMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARK 280 (297)
T ss_pred CCCCCCCCCHH--HHHHHHhcC-C-----CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 66665422110 011111000 0 001122345678899999999999999999999999998887554
No 173
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.3e-34 Score=310.02 Aligned_cols=242 Identities=22% Similarity=0.268 Sum_probs=191.8
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcC-CCccceEeeEeecCCCCCCce
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIR-HRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 607 (833)
+|+..+.||+|+||.||+|++..+++.||+|+++... ....+.+..|.++++.+. |++|+++++++...+ .
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~-----~ 75 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVD-----R 75 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCC-----E
Confidence 4778899999999999999999999999999997432 233456778999998886 577888888865544 8
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.|+||||+++|+|.+++.... .+++.+++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~Ey~~~g~L~~~i~~~~------~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg 146 (323)
T cd05615 76 LYFVMEYVNGGDLMYHIQQVG------KFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred EEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccc
Confidence 999999999999999997654 689999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD 767 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~ 767 (833)
+++....... ......||+.|+|||++.+..++.++|||| .|+++++++++..|+.....
T Consensus 147 ~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~Diws----------lGvil~elltG~~pf~~~~~-- 206 (323)
T cd05615 147 MCKEHMVDGV--------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWA----------YGVLLYEMLAGQPPFDGEDE-- 206 (323)
T ss_pred cccccCCCCc--------cccCccCCccccCHHHHcCCCCCCccchhh----------hHHHHHHHHhCCCCCCCCCH--
Confidence 9875432211 112346999999999999989999999999 88899999999988753221
Q ss_pred ccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCH
Q 040925 768 PSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDM 814 (833)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 814 (833)
............ ..+...+..+.+++.+||+.||++|++.
T Consensus 207 ~~~~~~i~~~~~-------~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 207 DELFQSIMEHNV-------SYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred HHHHHHHHhCCC-------CCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 111111111111 1122345677899999999999999985
No 174
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.5e-34 Score=304.23 Aligned_cols=252 Identities=23% Similarity=0.302 Sum_probs=198.8
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC---cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceE
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK---GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
.|++.+.||+|+||.||+|.+..+++.||+|.+..... ...+.+.+|+.++++++|++|+++++.+...+ ..
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~-----~~ 75 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKD-----AL 75 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCC-----EE
Confidence 37788999999999999999999999999999864322 12345778999999999999999999876544 89
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
++||||+++|+|.+++...... .+++.++..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||+
T Consensus 76 ~lv~e~~~g~~L~~~l~~~~~~----~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~ 148 (285)
T cd05630 76 CLVLTLMNGGDLKFHIYHMGEA----GFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGL 148 (285)
T ss_pred EEEEEecCCCcHHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccc
Confidence 9999999999999998654322 589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccc-cc
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEI-VD 767 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~-~~ 767 (833)
+........ .....||+.|+|||++.+..++.++|||| .|+++++++++..|+..... ..
T Consensus 149 ~~~~~~~~~---------~~~~~g~~~y~aPE~~~~~~~~~~~Diws----------lG~~l~~l~~g~~Pf~~~~~~~~ 209 (285)
T cd05630 149 AVHVPEGQT---------IKGRVGTVGYMAPEVVKNERYTFSPDWWA----------LGCLLYEMIAGQSPFQQRKKKIK 209 (285)
T ss_pred eeecCCCcc---------ccCCCCCccccChHHHcCCCCCCccccHH----------HHHHHHHHHhCCCCCCCCCccch
Confidence 875432211 11246999999999999989999999999 78889999999988763211 00
Q ss_pred ccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCC-----HHHHHHH
Q 040925 768 PSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMD-----MRDVVAK 820 (833)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~eil~~ 820 (833)
.......... .....+..+++.+.+++.+||+.||++||| ++|++++
T Consensus 210 ~~~~~~~~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 210 REEVERLVKE------VQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred HHHHHhhhhh------hhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 0000000000 001112335567889999999999999999 8888874
No 175
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.4e-34 Score=315.93 Aligned_cols=269 Identities=22% Similarity=0.316 Sum_probs=202.5
Q ss_pred HHHHhcCCccCceeccCcceEEEEEEEC-----CCceEEEEEEeeccCCc-chhHHHHHHHHHhhcC-CCccceEeeEee
Q 040925 526 LSKATGEFSSSNMIGQGSFGYVYKGTLG-----EDEMIVAVKVINLKYKG-ASRSFVAECEALRNIR-HRNLIKIITICS 598 (833)
Q Consensus 526 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-h~niv~~~~~~~ 598 (833)
+....++|.+.+.||+|+||.||+|++. ..++.||+|+++..... ..+.+.+|++++.++. ||||+++++++.
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~ 111 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT 111 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence 3344557889999999999999999964 34568999999754322 2356889999999997 999999999986
Q ss_pred cCCCCCCceEeEEEEecCCCChhhhhccCCCc------------------------------------------------
Q 040925 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQ------------------------------------------------ 630 (833)
Q Consensus 599 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------------------------------------------------ 630 (833)
... ..++||||+++|+|.++++..+..
T Consensus 112 ~~~-----~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (401)
T cd05107 112 KGG-----PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDES 186 (401)
T ss_pred cCC-----CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccc
Confidence 654 789999999999999999754210
Q ss_pred --------------------------------------------cccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceee
Q 040925 631 --------------------------------------------VEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHG 666 (833)
Q Consensus 631 --------------------------------------------~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~ 666 (833)
.....+++.+++.++.|++.||+|||+. +|+||
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHr 263 (401)
T cd05107 187 ADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHR 263 (401)
T ss_pred cCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcc
Confidence 0112467888999999999999999999 99999
Q ss_pred CCCCCCeeecCCCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccC
Q 040925 667 DLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNE 746 (833)
Q Consensus 667 Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~ 746 (833)
||||+||++++++.+||+|||+++........ .......+++.|+|||++.+..++.++|||| +
T Consensus 264 dlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws----------l 327 (401)
T cd05107 264 DLAARNVLICEGKLVKICDFGLARDIMRDSNY------ISKGSTFLPLKWMAPESIFNNLYTTLSDVWS----------F 327 (401)
T ss_pred cCCcceEEEeCCCEEEEEecCcceeccccccc------ccCCCcCCCCceeChHHhcCCCCCcHhHHHH----------H
Confidence 99999999999999999999999865332110 0111235788999999998888999999999 7
Q ss_pred CccHHHHHH-HhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhh
Q 040925 747 GHSLHEFAK-TALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTR 825 (833)
Q Consensus 747 g~~l~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~ 825 (833)
|++++++++ +..|+...... ............ ...+..++..+.+++.+||..+|++||+++||++.|+.+.
T Consensus 328 Gvil~e~l~~g~~P~~~~~~~--~~~~~~~~~~~~-----~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 328 GILLWEIFTLGGTPYPELPMN--EQFYNAIKRGYR-----MAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred HHHHHHHHHcCCCCCCCCCch--HHHHHHHHcCCC-----CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 778888776 55565322111 111111111100 0112234567899999999999999999999999998764
No 176
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=2.1e-34 Score=311.30 Aligned_cols=268 Identities=21% Similarity=0.324 Sum_probs=198.5
Q ss_pred hcCCccCceeccCcceEEEEEEEC-----CCceEEEEEEeeccCC-cchhHHHHHHHHHhhc-CCCccceEeeEeecCCC
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLG-----EDEMIVAVKVINLKYK-GASRSFVAECEALRNI-RHRNLIKIITICSSTDF 602 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 602 (833)
.++|++.+.||+|+||.||+|.+. .+++.||||+++.... ...+.+.+|+.++.++ +||||+++++++...+
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~- 84 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG- 84 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC-
Confidence 357999999999999999999852 4578999999975432 2345688999999999 6899999999875432
Q ss_pred CCCceEeEEEEecCCCChhhhhccCCCcc---------------------------------------------------
Q 040925 603 KGTDFKAFVFEYMENGSLKDWLHQSDDQV--------------------------------------------------- 631 (833)
Q Consensus 603 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~--------------------------------------------------- 631 (833)
...++||||+++|+|.+++.......
T Consensus 85 ---~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (343)
T cd05103 85 ---GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV 161 (343)
T ss_pred ---CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence 46789999999999999986532100
Q ss_pred ----------ccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccCcccccccc
Q 040925 632 ----------EVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV 701 (833)
Q Consensus 632 ----------~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~ 701 (833)
....+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~-- 236 (343)
T cd05103 162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV-- 236 (343)
T ss_pred hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchh--
Confidence 012468889999999999999999999 99999999999999999999999999997653321100
Q ss_pred cCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCcccccccccchhhhccccch
Q 040925 702 KTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEIVDPSLLMEVMTNNSM 780 (833)
Q Consensus 702 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~ 780 (833)
......+++.|+|||++.+..++.++|||| +|++++++++ +..|+..... +............
T Consensus 237 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s----------lG~~l~el~~~g~~p~~~~~~-~~~~~~~~~~~~~- 300 (343)
T cd05103 237 ----RKGDARLPLKWMAPETIFDRVYTIQSDVWS----------FGVLLWEIFSLGASPYPGVKI-DEEFCRRLKEGTR- 300 (343)
T ss_pred ----hcCCCCCCcceECcHHhcCCCCCchhhHHH----------HHHHHHHHHHCCCCCCCCccc-cHHHHHHHhccCC-
Confidence 011123567899999998888999999999 6667777765 5555432111 1111110000000
Q ss_pred hhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhhh
Q 040925 781 IQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRET 827 (833)
Q Consensus 781 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~~ 827 (833)
...+...++.+.+++.+||+.||++|||+.||++.|+.+.+.
T Consensus 301 -----~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 301 -----MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred -----CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 001112345688999999999999999999999999988763
No 177
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.3e-35 Score=309.78 Aligned_cols=248 Identities=21% Similarity=0.360 Sum_probs=197.9
Q ss_pred cCceeccCcceEEEEEEECCCceEEEEEEeec----cCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeE
Q 040925 535 SSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL----KYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAF 610 (833)
Q Consensus 535 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~----~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 610 (833)
....||+|+|-+||+|.+..+|..||--.++. ......++|..|+++|+.|+|||||++|.++.+.. ...+.+
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~---n~~in~ 120 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTD---NKTINF 120 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCC---Cceeee
Confidence 44789999999999999999998887433321 12334578999999999999999999999987765 356889
Q ss_pred EEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecC-CCcEEEcccccc
Q 040925 611 VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDH-DMVAHVCDFGLA 689 (833)
Q Consensus 611 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kL~DfG~a 689 (833)
|+|.+..|+|+.|.++.+ .+....++.|++||++||.|||++ .|+|||||||.+||+|+. -|.|||+|.|+|
T Consensus 121 iTEL~TSGtLr~Y~kk~~------~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLA 193 (632)
T KOG0584|consen 121 ITELFTSGTLREYRKKHR------RVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLA 193 (632)
T ss_pred eeecccCCcHHHHHHHhc------cCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHH
Confidence 999999999999999887 788999999999999999999998 789999999999999975 589999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPS 769 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~ 769 (833)
....... ..++.|||.|||||++. ..|+..+|||| +|+.+.||++..+|+..- -.+.
T Consensus 194 tl~r~s~----------aksvIGTPEFMAPEmYE-E~YnE~VDVYa----------FGMCmLEMvT~eYPYsEC--~n~A 250 (632)
T KOG0584|consen 194 TLLRKSH----------AKSVIGTPEFMAPEMYE-ENYNELVDVYA----------FGMCMLEMVTSEYPYSEC--TNPA 250 (632)
T ss_pred HHhhccc----------cceeccCccccChHHHh-hhcchhhhhhh----------hhHHHHHHHhccCChhhh--CCHH
Confidence 8765422 22367999999999876 68999999998 999999999999997621 1222
Q ss_pred chhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 770 LLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
-....+............. .+++.++|.+|+.. .++|||+.|+++.
T Consensus 251 QIYKKV~SGiKP~sl~kV~----dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 251 QIYKKVTSGIKPAALSKVK----DPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred HHHHHHHcCCCHHHhhccC----CHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 2222222111111111112 34688999999999 9999999999874
No 178
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.7e-34 Score=300.20 Aligned_cols=260 Identities=26% Similarity=0.431 Sum_probs=198.0
Q ss_pred cCCccCceeccCcceEEEEEEECCCce---EEEEEEeeccC-CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCc
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEM---IVAVKVINLKY-KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTD 606 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~---~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 606 (833)
++|++.+.||+|+||.||+|....+++ .||||.++... ......+..|+.++++++||||+++++++....
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~----- 78 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSR----- 78 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCC-----
Confidence 468899999999999999999876554 69999987542 233467999999999999999999999965443
Q ss_pred eEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccc
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDF 686 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 686 (833)
..++||||+++|+|.+++..... .+++.+++.++.|++.|++|||+. |++||||||+||+++.++.+||+||
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~df 150 (269)
T cd05065 79 PVMIITEFMENGALDSFLRQNDG-----QFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDF 150 (269)
T ss_pred ceEEEEecCCCCcHHHHHhhCCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCC
Confidence 78999999999999999976432 589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCccccc
Q 040925 687 GLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEI 765 (833)
Q Consensus 687 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~ 765 (833)
|++............ ....+..++..|+|||++.+..++.++|||| +|+.++++++ +..|+.....
T Consensus 151 g~~~~~~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~Dvws----------lG~~l~e~l~~g~~p~~~~~~ 217 (269)
T cd05065 151 GLSRFLEDDTSDPTY---TSSLGGKIPIRWTAPEAIAYRKFTSASDVWS----------YGIVMWEVMSYGERPYWDMSN 217 (269)
T ss_pred ccccccccCcccccc---ccccCCCcceeecCHhHhccCcccchhhhhh----------hHHHHHHHhcCCCCCCCCCCH
Confidence 998765432211100 0001111246799999999889999999999 6777777664 6666542211
Q ss_pred ccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 040925 766 VDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHT 824 (833)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i 824 (833)
. .. ...+.... ....+.+++..+.+++.+||..+|++||++++|++.|+++
T Consensus 218 ~--~~-~~~i~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 218 Q--DV-INAIEQDY-----RLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred H--HH-HHHHHcCC-----cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1 11 11111110 1112234566788999999999999999999999998764
No 179
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.9e-34 Score=302.99 Aligned_cols=260 Identities=24% Similarity=0.375 Sum_probs=199.5
Q ss_pred cCCccCceeccCcceEEEEEEEC-----CCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCC
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLG-----EDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGT 605 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 605 (833)
.+|+..++||+|+||.||+|... .++..||+|.++.........+.+|++++++++||||+++++++....
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 80 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGR---- 80 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCC----
Confidence 46888999999999999999753 356789999987555555678999999999999999999999976554
Q ss_pred ceEeEEEEecCCCChhhhhccCCCc---------cccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeec
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQ---------VEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLD 676 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~---------~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~ 676 (833)
..++||||+++|+|.+++...... .....+++.+++.++.|++.|++|||+. +++||||||+||+++
T Consensus 81 -~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~ 156 (280)
T cd05092 81 -PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVG 156 (280)
T ss_pred -ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEc
Confidence 789999999999999999765321 0112578999999999999999999999 999999999999999
Q ss_pred CCCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-
Q 040925 677 HDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK- 755 (833)
Q Consensus 677 ~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~- 755 (833)
+++.+||+|||++.......... ......+++.|+|||++.+..++.++|||| +|+.++++++
T Consensus 157 ~~~~~kL~dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s----------lG~il~el~~~ 220 (280)
T cd05092 157 QGLVVKIGDFGMSRDIYSTDYYR------VGGRTMLPIRWMPPESILYRKFTTESDIWS----------FGVVLWEIFTY 220 (280)
T ss_pred CCCCEEECCCCceeEcCCCceee------cCCCccccccccCHHHhccCCcCchhhHHH----------HHHHHHHHHcC
Confidence 99999999999987553321100 011234678899999999889999999999 7777888876
Q ss_pred HhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 040925 756 TALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLC 822 (833)
Q Consensus 756 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 822 (833)
+..|+..... ........... ....+..++..+.+++.+||+.||++||+++||++.|+
T Consensus 221 g~~p~~~~~~--~~~~~~~~~~~------~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 221 GKQPWYQLSN--TEAIECITQGR------ELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred CCCCCccCCH--HHHHHHHHcCc------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 6666532111 11111111100 00112234567889999999999999999999999886
No 180
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-34 Score=295.96 Aligned_cols=250 Identities=20% Similarity=0.286 Sum_probs=206.9
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC--cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
.+=|...+.||+|.|+.|-+|++.-+|+.||||++.+..- .....+.+|++.|+-++|||||++|.+.... ..
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQ-----TK 91 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQ-----TK 91 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhccc-----ce
Confidence 4568888999999999999999999999999999975432 2345788999999999999999999995444 48
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeee-cCCCcEEEccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLL-DHDMVAHVCDF 686 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll-~~~~~~kL~Df 686 (833)
.|+|+|.-++|+|++||-++.. .+.+.-+.+++.||+.|+.|+|.. .+|||||||+|+.+ .+-|-|||.||
T Consensus 92 lyLiLELGD~GDl~DyImKHe~-----Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDF 163 (864)
T KOG4717|consen 92 LYLILELGDGGDLFDYIMKHEE-----GLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDF 163 (864)
T ss_pred EEEEEEecCCchHHHHHHhhhc-----cccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeec
Confidence 9999999999999999988764 689999999999999999999999 99999999999876 56789999999
Q ss_pred ccccccCcccccccccCCCccccccccccccCccccCCCCCC-cccccccCCcCCCccccCCccHHHHHHHhCCCccccc
Q 040925 687 GLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEAS-MTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEI 765 (833)
Q Consensus 687 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~ 765 (833)
|++-.+.+.. .....+|+..|-|||++.|..|+ +++|||| .|+++|.++-|..|+...
T Consensus 164 GFSNkf~PG~---------kL~TsCGSLAYSAPEILLGDsYDAPAVDiWS----------LGVILyMLVCGq~PFqeA-- 222 (864)
T KOG4717|consen 164 GFSNKFQPGK---------KLTTSCGSLAYSAPEILLGDSYDAPAVDIWS----------LGVILYMLVCGQPPFQEA-- 222 (864)
T ss_pred cccccCCCcc---------hhhcccchhhccCchhhhcCccCCcchhhhH----------HHHHHHHHHhCCCccccc--
Confidence 9997765532 23346899999999999999987 5679999 899999999999998633
Q ss_pred ccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 766 VDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.|.+-....+.-++ ..+.....+..++|..|+.+||.+|.|.+||+..
T Consensus 223 NDSETLTmImDCKY-------tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 223 NDSETLTMIMDCKY-------TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred cchhhhhhhhcccc-------cCchhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 23333222222111 1245567788999999999999999999999754
No 181
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=3e-34 Score=306.01 Aligned_cols=258 Identities=21% Similarity=0.298 Sum_probs=194.7
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
++|.+.+.||+|+||.||+|++..+++.||+|.++.... .....+.+|++++++++||||+++++++...+ ..+
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~ 80 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDK-----SLT 80 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCC-----eEE
Confidence 579999999999999999999998999999999975432 23356788999999999999999999976554 799
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||+++ +|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 81 lv~e~~~~-~l~~~~~~~~~-----~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 151 (309)
T cd07872 81 LVFEYLDK-DLKQYMDDCGN-----IMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLA 151 (309)
T ss_pred EEEeCCCC-CHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccc
Confidence 99999975 89888865432 578999999999999999999999 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDP 768 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~ 768 (833)
+....... ......+|+.|+|||++.+ ..++.++|||| .|+++++++++..|+......+.
T Consensus 152 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws----------lG~il~el~tg~~pf~~~~~~~~ 213 (309)
T cd07872 152 RAKSVPTK--------TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWG----------VGCIFFEMASGRPLFPGSTVEDE 213 (309)
T ss_pred eecCCCcc--------ccccccccccccCCHHHhCCCCCCcHHHHHH----------HHHHHHHHHhCCCCCCCCChHHH
Confidence 75433211 1112358999999998765 45889999999 77778888888776642211110
Q ss_pred cc-------------hhhhcccc----chhh----hhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 769 SL-------------LMEVMTNN----SMIQ----EDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 769 ~~-------------~~~~~~~~----~~~~----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.. ........ .... ..........+.++.+++.+|+..||++|||++|+++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 214 LHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred HHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 00 00000000 0000 00000112245677899999999999999999999874
No 182
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2.7e-34 Score=300.08 Aligned_cols=259 Identities=25% Similarity=0.404 Sum_probs=200.5
Q ss_pred hcCCccCceeccCcceEEEEEEECCCce---EEEEEEeeccC-CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCC
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEM---IVAVKVINLKY-KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGT 605 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~---~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 605 (833)
.++|+..+.||+|++|.||+|+...++. .||+|.++... ....+.+..|++++++++||||+++++++...+
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 79 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFK---- 79 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCC----
Confidence 3478889999999999999999865543 79999986542 223467889999999999999999999976554
Q ss_pred ceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcc
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 685 (833)
..++||||+++++|.+++..... .+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|
T Consensus 80 -~~~lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~d 150 (268)
T cd05063 80 -PAMIITEYMENGALDKYLRDHDG-----EFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSD 150 (268)
T ss_pred -CcEEEEEcCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECC
Confidence 78999999999999999976432 589999999999999999999999 999999999999999999999999
Q ss_pred cccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCcccc
Q 040925 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVME 764 (833)
Q Consensus 686 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~ 764 (833)
||++............ ......++.|+|||++.+..++.++|||| +|++++++++ +..|+....
T Consensus 151 fg~~~~~~~~~~~~~~-----~~~~~~~~~y~~PE~~~~~~~~~~~Dv~s----------lG~il~ell~~g~~p~~~~~ 215 (268)
T cd05063 151 FGLSRVLEDDPEGTYT-----TSGGKIPIRWTAPEAIAYRKFTSASDVWS----------FGIVMWEVMSFGERPYWDMS 215 (268)
T ss_pred Cccceeccccccccee-----ccCCCcCceecCHHHhhcCCcChHhHHHH----------HHHHHHHHHhCCCCCCCcCC
Confidence 9998765432211100 01122356799999998888999999999 7778888776 777764221
Q ss_pred cccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 040925 765 IVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHT 824 (833)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i 824 (833)
. ....... .... ......+++..+.+++.+||..+|++||++.+|++.|.++
T Consensus 216 ~--~~~~~~i-~~~~-----~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 216 N--HEVMKAI-NDGF-----RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred H--HHHHHHH-hcCC-----CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1 1111111 1100 1112234567789999999999999999999999999875
No 183
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.7e-34 Score=309.44 Aligned_cols=238 Identities=26% Similarity=0.286 Sum_probs=184.8
Q ss_pred ceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHH-HHhhcCCCccceEeeEeecCCCCCCceEeEEE
Q 040925 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECE-ALRNIRHRNLIKIITICSSTDFKGTDFKAFVF 612 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 612 (833)
+.||+|+||.||+|++..+++.||+|++.... ......+..|.. +++.++||||+++++++...+ ..++||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~-----~~~lv~ 75 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAE-----KLYFVL 75 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCC-----EEEEEE
Confidence 47999999999999999999999999996432 122334555554 578889999999999875554 899999
Q ss_pred EecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccccc
Q 040925 613 EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL 692 (833)
Q Consensus 613 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 692 (833)
||+++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 146 (321)
T cd05603 76 DYVNGGELFFHLQRER------CFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (321)
T ss_pred cCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccC
Confidence 9999999998887543 688999999999999999999999 9999999999999999999999999998753
Q ss_pred CcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchh
Q 040925 693 SDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLM 772 (833)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~ 772 (833)
.... .......||+.|+|||++.+..++.++|||| +|+++|+++++..|+...+.. ....
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~Diws----------lG~il~el~~g~~pf~~~~~~--~~~~ 206 (321)
T cd05603 147 VEPE--------ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWC----------LGAVLYEMLYGLPPFYSRDVS--QMYD 206 (321)
T ss_pred CCCC--------CccccccCCcccCCHHHhcCCCCCCcCcccc----------cchhhhhhhcCCCCCCCCCHH--HHHH
Confidence 2211 1112356999999999999889999999999 788888888888887532210 1111
Q ss_pred hhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHH
Q 040925 773 EVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMR 815 (833)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ 815 (833)
....... ..+......+.+++.+|++.||++||++.
T Consensus 207 ~i~~~~~-------~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 207 NILHKPL-------QLPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred HHhcCCC-------CCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 1111111 11122355688999999999999999764
No 184
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.2e-34 Score=301.43 Aligned_cols=253 Identities=27% Similarity=0.403 Sum_probs=197.6
Q ss_pred CccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcch--hHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeE
Q 040925 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGAS--RSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAF 610 (833)
Q Consensus 533 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 610 (833)
|++.+.||+|+||+||+|+...+++.||+|++........ ....+|+.++++++||||+++++++.... ..++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~-----~~~~ 75 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDN-----YLYI 75 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESS-----EEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccc-----cccc
Confidence 6788999999999999999999999999999975543222 23456999999999999999999976654 8899
Q ss_pred EEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccc
Q 040925 611 VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690 (833)
Q Consensus 611 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 690 (833)
||||+++++|.+++.... .+++..++.++.|+++||++||+. +|+|+||||+||+++.++.++|+|||.+.
T Consensus 76 v~~~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~ 146 (260)
T PF00069_consen 76 VMEYCPGGSLQDYLQKNK------PLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSV 146 (260)
T ss_dssp EEEEETTEBHHHHHHHHS------SBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTE
T ss_pred cccccccccccccccccc------cccccccccccccccccccccccc---ccccccccccccccccccccccccccccc
Confidence 999999999999998333 689999999999999999999999 99999999999999999999999999997
Q ss_pred ccCcccccccccCCCccccccccccccCccccC-CCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccccc
Q 040925 691 FLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGM-GSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPS 769 (833)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~ 769 (833)
...... .......+|+.|+|||++. +..++.++|||| .|.++++++++..|+......+..
T Consensus 147 ~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s----------lG~il~~l~~~~~p~~~~~~~~~~ 208 (260)
T PF00069_consen 147 KLSENN--------ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWS----------LGIILYELLTGKLPFEESNSDDQL 208 (260)
T ss_dssp ESTSTT--------SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHH----------HHHHHHHHHHSSSSSTTSSHHHHH
T ss_pred cccccc--------cccccccccccccccccccccccccccccccc----------cccccccccccccccccccchhhh
Confidence 541111 1122346899999999988 888999999999 888899999998887643111111
Q ss_pred chhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 770 LLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
......... ...............+.+++.+||+.||++|||+.++++
T Consensus 209 ~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 209 EIIEKILKR--PLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HHHHHHHHT--HHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred hhhhhcccc--cccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 111000000 000001111111378999999999999999999999975
No 185
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.8e-34 Score=302.76 Aligned_cols=262 Identities=21% Similarity=0.337 Sum_probs=199.0
Q ss_pred HhcCCccCceeccCcceEEEEEEECC-----CceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCC
Q 040925 529 ATGEFSSSNMIGQGSFGYVYKGTLGE-----DEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDF 602 (833)
Q Consensus 529 ~~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 602 (833)
..++|.+.+.||+|++|.||+|.+.. ++..||+|.+..... .....+.+|+.++++++|+||+++++++....
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~- 82 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERL- 82 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC-
Confidence 34679999999999999999999976 678899999864432 23456899999999999999999999875544
Q ss_pred CCCceEeEEEEecCCCChhhhhccCCCc-cccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCC--
Q 040925 603 KGTDFKAFVFEYMENGSLKDWLHQSDDQ-VEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM-- 679 (833)
Q Consensus 603 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~-~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~-- 679 (833)
..++||||+++|+|.+++...... .....+++.+++.++.||+.|++|||+. +++||||||+||+++.++
T Consensus 83 ----~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~ 155 (277)
T cd05036 83 ----PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPG 155 (277)
T ss_pred ----CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCC
Confidence 678999999999999999765421 1122589999999999999999999999 999999999999998755
Q ss_pred -cEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-Hh
Q 040925 680 -VAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TA 757 (833)
Q Consensus 680 -~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~ 757 (833)
.+||+|||+++......... ......++..|+|||++.+..++.++|||| +|++++++++ +.
T Consensus 156 ~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws----------lG~il~el~~~g~ 219 (277)
T cd05036 156 RVAKIADFGMARDIYRASYYR------KGGRAMLPIKWMPPEAFLDGIFTSKTDVWS----------FGVLLWEIFSLGY 219 (277)
T ss_pred cceEeccCccccccCCcccee------cCCCCCccHhhCCHHHHhcCCcCchhHHHH----------HHHHHHHHHcCCC
Confidence 69999999998663321110 011123457899999999889999999999 7777777775 66
Q ss_pred CCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 040925 758 LPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLC 822 (833)
Q Consensus 758 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 822 (833)
.|+..... ... ........ ....+..++..+.+++.+||+.+|++|||+.+|++.|.
T Consensus 220 ~pf~~~~~--~~~-~~~~~~~~-----~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 220 MPYPGRTN--QEV-MEFVTGGG-----RLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred CCCCCCCH--HHH-HHHHHcCC-----cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 66542111 111 11111100 00112334567899999999999999999999999885
No 186
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=2.9e-34 Score=299.53 Aligned_cols=259 Identities=27% Similarity=0.410 Sum_probs=198.6
Q ss_pred hcCCccCceeccCcceEEEEEEECCC---ceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCC
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGED---EMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGT 605 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 605 (833)
.++|++.+.||+|+||.||+|++..+ +..||+|.++.... ...+.+.+|+.++++++||||+++++++...+
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 78 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSK---- 78 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC----
Confidence 35789999999999999999987533 34799999865432 23467899999999999999999999975544
Q ss_pred ceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcc
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 685 (833)
..++||||+++|+|.+++..... .+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+||+|
T Consensus 79 -~~~lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~d 149 (267)
T cd05066 79 -PVMIVTEYMENGSLDAFLRKHDG-----QFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSD 149 (267)
T ss_pred -ccEEEEEcCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCC
Confidence 78999999999999999976532 579999999999999999999999 999999999999999999999999
Q ss_pred cccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCcccc
Q 040925 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVME 764 (833)
Q Consensus 686 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~ 764 (833)
||.+..+........ ......++..|+|||++.+..++.++|+|| +|+.++++++ +..|+....
T Consensus 150 fg~~~~~~~~~~~~~-----~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~s----------lG~~l~ell~~g~~p~~~~~ 214 (267)
T cd05066 150 FGLSRVLEDDPEAAY-----TTRGGKIPIRWTAPEAIAYRKFTSASDVWS----------YGIVMWEVMSYGERPYWEMS 214 (267)
T ss_pred CCcccccccccceee-----ecCCCccceeecCHhHhccCccCchhhhHH----------HHHHHHHHhcCCCCCcccCC
Confidence 999987654221110 011123467899999999888999999999 6777777664 666654221
Q ss_pred cccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 040925 765 IVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHT 824 (833)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i 824 (833)
.. .... .+.... .......++..+.+++.+||+.+|++||++.++++.|.++
T Consensus 215 ~~--~~~~-~~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 215 NQ--DVIK-AIEEGY-----RLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred HH--HHHH-HHhCCC-----cCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 11 1111 111110 0011223466788999999999999999999999999875
No 187
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.7e-34 Score=315.92 Aligned_cols=262 Identities=21% Similarity=0.279 Sum_probs=195.3
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC--cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
+|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+.+|+++++.++||||+++++++...........|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 47889999999999999999988999999999864322 2346788999999999999999999997655433334689
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||+. ++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 81 lv~e~~~-~~l~~~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a 150 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSPQ------PLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLA 150 (372)
T ss_pred EEeeccc-cCHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccce
Confidence 9999996 58888886543 689999999999999999999999 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCC-CCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS-EASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDP 768 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~ 768 (833)
+....... .......+|+.|+|||++.+. .++.++|||| .|+++++++++..|+......+.
T Consensus 151 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws----------lG~il~el~~g~~pf~~~~~~~~ 213 (372)
T cd07853 151 RVEEPDES-------KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWS----------VGCIFAELLGRRILFQAQSPIQQ 213 (372)
T ss_pred eecccCcc-------ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHh----------HHHHHHHHHcCCCCCCCCCHHHH
Confidence 76433211 111224589999999998774 4789999999 77777888887777642211100
Q ss_pred c-chh--------------------hhccccchhhhhh--hhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 769 S-LLM--------------------EVMTNNSMIQEDK--RVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 769 ~-~~~--------------------~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
- ... ............. .....+..+.+.+++.+||+.||++|||++|+++.
T Consensus 214 ~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 214 LDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 0 000 0000000000000 00111235678899999999999999999999875
No 188
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.3e-34 Score=303.05 Aligned_cols=261 Identities=22% Similarity=0.350 Sum_probs=197.4
Q ss_pred cCCccCceeccCcceEEEEEEE----CCCceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCC
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTL----GEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGT 605 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 605 (833)
.+|++.+.||+|+||.||+|.. ..++..||+|.++.... .....+.+|++++++++||||+++++++....
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 80 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQ---- 80 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCC----
Confidence 4688899999999999999985 34567899999974332 23357889999999999999999999975544
Q ss_pred ceEeEEEEecCCCChhhhhccCCCc-----------cccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCee
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQ-----------VEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVL 674 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIl 674 (833)
..|+||||+++|+|.+++...... .....+++.++..++.|++.||+|||+. +|+||||||+||+
T Consensus 81 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nil 156 (283)
T cd05090 81 -PVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNIL 156 (283)
T ss_pred -ceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEE
Confidence 789999999999999998643210 0112578899999999999999999999 9999999999999
Q ss_pred ecCCCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHH
Q 040925 675 LDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFA 754 (833)
Q Consensus 675 l~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~ 754 (833)
++.++.+||+|||+++......... ......++..|+|||++.+..++.++|||| +|+++++++
T Consensus 157 i~~~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s----------lG~il~el~ 220 (283)
T cd05090 157 IGEQLHVKISDLGLSREIYSADYYR------VQPKSLLPIRWMPPEAIMYGKFSSDSDIWS----------FGVVLWEIF 220 (283)
T ss_pred EcCCCcEEeccccccccccCCccee------cccCCCccceecChHHhccCCCCchhhhHH----------HHHHHHHHH
Confidence 9999999999999998654322111 111234677899999998888999999999 777778877
Q ss_pred H-HhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 040925 755 K-TALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCH 823 (833)
Q Consensus 755 ~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 823 (833)
+ +..|+.... +....+...... ....+..++..+.+++.+||+.||++||++.+|.+++..
T Consensus 221 ~~g~~p~~~~~---~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 221 SFGLQPYYGFS---NQEVIEMVRKRQ-----LLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred cCCCCCCCCCC---HHHHHHHHHcCC-----cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 6 555543111 101011111100 011122345678899999999999999999999988763
No 189
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2.2e-34 Score=323.97 Aligned_cols=261 Identities=19% Similarity=0.255 Sum_probs=191.8
Q ss_pred HHHHHHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCC------CccceEeeEe
Q 040925 524 AELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRH------RNLIKIITIC 597 (833)
Q Consensus 524 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~~~~~~ 597 (833)
.++....++|++.+.||+|+||.||+|.+..+++.||||+++... ...+....|+.+++.++| ++++++++++
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 344456789999999999999999999999899999999996432 233456678888877754 4588888887
Q ss_pred ecCCCCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhh-cCCCCceeeCCCCCCeeec
Q 040925 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH-HCQPPMVHGDLKPSNVLLD 676 (833)
Q Consensus 598 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~-~~~~~ivH~Dlkp~NIll~ 676 (833)
... ..+.|+|||++ +++|.+++...+ .+++..+..|+.||+.||+|||+ . |||||||||+|||++
T Consensus 201 ~~~----~~~~~iv~~~~-g~~l~~~l~~~~------~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~ 266 (467)
T PTZ00284 201 QNE----TGHMCIVMPKY-GPCLLDWIMKHG------PFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILME 266 (467)
T ss_pred EcC----CceEEEEEecc-CCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEe
Confidence 543 34789999998 679999887654 68999999999999999999997 5 999999999999998
Q ss_pred CCC----------------cEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCC
Q 040925 677 HDM----------------VAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPI 740 (833)
Q Consensus 677 ~~~----------------~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~ 740 (833)
.++ .+||+|||.+..... .....+||+.|||||++.+..++.++||||
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~-----------~~~~~~gt~~Y~APE~~~~~~~~~~~DiwS----- 330 (467)
T PTZ00284 267 TSDTVVDPVTNRALPPDPCRVRICDLGGCCDERH-----------SRTAIVSTRHYRSPEVVLGLGWMYSTDMWS----- 330 (467)
T ss_pred cCCcccccccccccCCCCceEEECCCCccccCcc-----------ccccccCCccccCcHHhhcCCCCcHHHHHH-----
Confidence 765 499999998764221 112357999999999999999999999999
Q ss_pred CccccCCccHHHHHHHhCCCcccccccc-------------cchh--------hhccccch------hhhhhh------h
Q 040925 741 DAVFNEGHSLHEFAKTALPEKVMEIVDP-------------SLLM--------EVMTNNSM------IQEDKR------V 787 (833)
Q Consensus 741 ~~~~~~g~~l~~~~~~~~p~~~~~~~~~-------------~~~~--------~~~~~~~~------~~~~~~------~ 787 (833)
+|+++|++++|..|+......+. .+.. +....... .....+ .
T Consensus 331 -----lGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (467)
T PTZ00284 331 -----MGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPV 405 (467)
T ss_pred -----HHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccch
Confidence 77788888888877642211100 0000 00000000 000000 0
Q ss_pred chHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 788 KTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 788 ~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
........+.+++.+||++||++|||++|++++
T Consensus 406 ~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~H 438 (467)
T PTZ00284 406 REVIRDDLLCDLIYGLLHYDRQKRLNARQMTTH 438 (467)
T ss_pred hhhhchHHHHHHHHHhCCcChhhCCCHHHHhcC
Confidence 000013457899999999999999999999874
No 190
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=3.7e-34 Score=296.59 Aligned_cols=250 Identities=23% Similarity=0.357 Sum_probs=190.8
Q ss_pred eeccCcceEEEEEEEC--CCceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEEEe
Q 040925 538 MIGQGSFGYVYKGTLG--EDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEY 614 (833)
Q Consensus 538 ~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 614 (833)
.||+|+||.||+|.+. .++..||+|++..... ...+.+.+|+.++++++||||+++++++.. ...++||||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~------~~~~lv~e~ 75 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA------EALMLVMEM 75 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC------CCeEEEEEe
Confidence 4899999999999774 4566799999875432 234568999999999999999999998642 257899999
Q ss_pred cCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccCc
Q 040925 615 MENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSD 694 (833)
Q Consensus 615 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 694 (833)
+++|+|.+++..... .+++..+++++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 76 ~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 147 (257)
T cd05115 76 ASGGPLNKFLSGKKD-----EITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGA 147 (257)
T ss_pred CCCCCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccC
Confidence 999999999875432 689999999999999999999999 999999999999999999999999999975543
Q ss_pred ccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCcccccccccchhh
Q 040925 695 HQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEIVDPSLLME 773 (833)
Q Consensus 695 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~~~~~~~~~ 773 (833)
...... ......+++.|+|||++.+..++.++|||| +|++++++++ +..|+..... .... .
T Consensus 148 ~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s----------lG~~l~el~~~g~~p~~~~~~--~~~~-~ 209 (257)
T cd05115 148 DDSYYK-----ARSAGKWPLKWYAPECINFRKFSSRSDVWS----------YGITMWEAFSYGQKPYKKMKG--PEVM-S 209 (257)
T ss_pred Ccccee-----ccCCCCCCcccCCHHHHccCCCCchhhHHH----------HHHHHHHHhcCCCCCcCcCCH--HHHH-H
Confidence 221100 011122467899999988888999999999 7777777775 6666542211 1111 1
Q ss_pred hccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 040925 774 VMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHT 824 (833)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i 824 (833)
...... ....+..++.++.+++.+||..||++||++.+|.+.|+.+
T Consensus 210 ~~~~~~-----~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 210 FIEQGK-----RLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred HHHCCC-----CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 111100 0111233467888999999999999999999999998865
No 191
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.2e-34 Score=305.18 Aligned_cols=267 Identities=22% Similarity=0.347 Sum_probs=200.7
Q ss_pred HhcCCccCceeccCcceEEEEEEEC-------CCceEEEEEEeeccC-CcchhHHHHHHHHHhhc-CCCccceEeeEeec
Q 040925 529 ATGEFSSSNMIGQGSFGYVYKGTLG-------EDEMIVAVKVINLKY-KGASRSFVAECEALRNI-RHRNLIKIITICSS 599 (833)
Q Consensus 529 ~~~~y~~~~~lg~G~~g~Vy~~~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 599 (833)
..++|.+.+.||+|+||.||+|+.. .++..||+|.++... ....+.+.+|+.+++.+ +||||+++++++..
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 3567899999999999999999752 235579999986432 23346789999999999 79999999999765
Q ss_pred CCCCCCceEeEEEEecCCCChhhhhccCCCcc----------ccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCC
Q 040925 600 TDFKGTDFKAFVFEYMENGSLKDWLHQSDDQV----------EVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLK 669 (833)
Q Consensus 600 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlk 669 (833)
.. ..++||||+++|+|.+++....... ....+++.++..++.|++.||+|||+. ||+|||||
T Consensus 93 ~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlk 164 (304)
T cd05101 93 DG-----PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLA 164 (304)
T ss_pred CC-----ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---Ceeecccc
Confidence 54 7899999999999999997643210 112578899999999999999999999 99999999
Q ss_pred CCCeeecCCCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCcc
Q 040925 670 PSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHS 749 (833)
Q Consensus 670 p~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~ 749 (833)
|+||+++.++.+||+|||.++......... ......+++.|+|||++.+..++.++|||| +|++
T Consensus 165 p~Nili~~~~~~kl~D~g~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s----------lG~~ 228 (304)
T cd05101 165 ARNVLVTENNVMKIADFGLARDVNNIDYYK------KTTNGRLPVKWMAPEALFDRVYTHQSDVWS----------FGVL 228 (304)
T ss_pred cceEEEcCCCcEEECCCccceecccccccc------cccCCCCCceeeCchhhccCCCCchhhHHH----------HHHH
Confidence 999999999999999999998664422111 111223678899999998888999999999 6666
Q ss_pred HHHHHH-HhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhhh
Q 040925 750 LHEFAK-TALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRET 827 (833)
Q Consensus 750 l~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~~ 827 (833)
++++++ +..|+.... ............ ....+..++..+.+++.+||..+|++|||+.|+++.|.++...
T Consensus 229 l~el~~~g~~p~~~~~---~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 229 MWEIFTLGGSPYPGIP---VEELFKLLKEGH-----RMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred HHHHHcCCCCCcccCC---HHHHHHHHHcCC-----cCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 666665 344432111 000011111100 0011234567789999999999999999999999999988753
No 192
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=3.3e-34 Score=303.82 Aligned_cols=265 Identities=22% Similarity=0.372 Sum_probs=197.2
Q ss_pred cCCccCceeccCcceEEEEEEECC----------------CceEEEEEEeeccC-CcchhHHHHHHHHHhhcCCCccceE
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGE----------------DEMIVAVKVINLKY-KGASRSFVAECEALRNIRHRNLIKI 593 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~----------------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~ 593 (833)
++|++.+.||+|+||.||+|.+.. ++..||+|+++... ......+.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 479999999999999999986532 34579999997542 2234678999999999999999999
Q ss_pred eeEeecCCCCCCceEeEEEEecCCCChhhhhccCCCcc-----ccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCC
Q 040925 594 ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQV-----EVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDL 668 (833)
Q Consensus 594 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-----~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dl 668 (833)
++++...+ ..++||||+++|+|.+++....... ....+++.+++.++.|++.||+|||+. +++||||
T Consensus 85 ~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl 156 (296)
T cd05095 85 LAVCITSD-----PLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDL 156 (296)
T ss_pred EEEEecCC-----ccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccC
Confidence 99976654 7899999999999999997643211 112478889999999999999999999 9999999
Q ss_pred CCCCeeecCCCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCc
Q 040925 669 KPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGH 748 (833)
Q Consensus 669 kp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~ 748 (833)
||+||+++.++.+||+|||+++.+....... ......+++.|+|||+..+..++.++|||| +|+
T Consensus 157 kp~Nili~~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~~~~~~pe~~~~~~~~~~~DiwS----------lG~ 220 (296)
T cd05095 157 ATRNCLVGKNYTIKIADFGMSRNLYSGDYYR------IQGRAVLPIRWMSWESILLGKFTTASDVWA----------FGV 220 (296)
T ss_pred ChheEEEcCCCCEEeccCcccccccCCccee------ccCcCcCccccCCHHHHhcCCccchhhhhH----------HHH
Confidence 9999999999999999999998654322110 011123567899999988888999999999 777
Q ss_pred cHHHHHH--HhCCCcccccccccchhhh---ccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 040925 749 SLHEFAK--TALPEKVMEIVDPSLLMEV---MTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCH 823 (833)
Q Consensus 749 ~l~~~~~--~~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 823 (833)
+++++++ +..|+.... +....... ..... .......+..++..+.+++.+||+.||++|||+.||.+.|++
T Consensus 221 ~l~el~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 221 TLWEILTLCKEQPYSQLS--DEQVIENTGEFFRDQG--RQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred HHHHHHHhCCCCCccccC--hHHHHHHHHHHHhhcc--ccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 8888876 445543211 11110000 00000 000011122345788999999999999999999999998863
No 193
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.6e-34 Score=303.26 Aligned_cols=251 Identities=22% Similarity=0.271 Sum_probs=202.4
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeE
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAF 610 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 610 (833)
.+|++.+.||+|++|.||+|....+++.||+|.+........+.+.+|+.+++.++||||+++++++.... ..++
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~l 93 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD-----ELWV 93 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-----EEEE
Confidence 57999999999999999999998899999999997655555677889999999999999999999976544 8999
Q ss_pred EEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccc
Q 040925 611 VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690 (833)
Q Consensus 611 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 690 (833)
||||+++++|.+++... .+++.++..++.|++.||.|||+. +++||||||+||+++.++.+||+|||.+.
T Consensus 94 v~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~ 163 (297)
T cd06656 94 VMEYLAGGSLTDVVTET-------CMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCA 163 (297)
T ss_pred eecccCCCCHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccce
Confidence 99999999999998653 578899999999999999999999 99999999999999999999999999987
Q ss_pred ccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccc
Q 040925 691 FLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSL 770 (833)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~ 770 (833)
....... ......|++.|+|||...+..++.++|+|| +|+++++++++..|+...+......
T Consensus 164 ~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s----------lGvil~~l~tg~~pf~~~~~~~~~~ 225 (297)
T cd06656 164 QITPEQS--------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWS----------LGIMAIEMVEGEPPYLNENPLRALY 225 (297)
T ss_pred EccCCcc--------CcCcccCCccccCHHHHcCCCCCcHHHHHH----------HHHHHHHHHhCCCCCCCCCcchhee
Confidence 6543221 111235889999999998888999999999 7888899999988875322111100
Q ss_pred hhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 771 LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
. ...... .....+...+..+.+++.+||..||++||+++++++.
T Consensus 226 ~--~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 226 L--IATNGT----PELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred e--eccCCC----CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 000000 0001123345678899999999999999999999874
No 194
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=2.5e-34 Score=301.89 Aligned_cols=261 Identities=22% Similarity=0.353 Sum_probs=198.6
Q ss_pred hcCCccCceeccCcceEEEEEEECCC-----ceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCC
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGED-----EMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFK 603 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 603 (833)
.++|++.+.||+|+||.||+|..... +..||+|.+..... .....+.+|+.+++.++||||+++++++....
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-- 82 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ-- 82 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC--
Confidence 45799999999999999999988643 47899999864422 23456889999999999999999999975543
Q ss_pred CCceEeEEEEecCCCChhhhhccCCCcc----ccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCC
Q 040925 604 GTDFKAFVFEYMENGSLKDWLHQSDDQV----EVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM 679 (833)
Q Consensus 604 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~----~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~ 679 (833)
..++||||+++|+|.+++....... ....+++..++.++.|++.||.|||+. +|+||||||+||+++.++
T Consensus 83 ---~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~ 156 (277)
T cd05032 83 ---PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDL 156 (277)
T ss_pred ---CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCC
Confidence 7899999999999999997643211 112478899999999999999999999 999999999999999999
Q ss_pred cEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhC
Q 040925 680 VAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TAL 758 (833)
Q Consensus 680 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~ 758 (833)
.+||+|||+++......... ......++..|+|||.+.+..++.++|||| +|++++++++ +..
T Consensus 157 ~~kl~dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s----------lG~il~el~t~g~~ 220 (277)
T cd05032 157 TVKIGDFGMTRDIYETDYYR------KGGKGLLPVRWMAPESLKDGVFTTKSDVWS----------FGVVLWEMATLAEQ 220 (277)
T ss_pred CEEECCcccchhhccCcccc------cCCCCCccccccCHHHHhcCCCCcccchHH----------HHHHHHHhhccCCC
Confidence 99999999998654432111 111234688999999998888999999999 6777777776 555
Q ss_pred CCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 040925 759 PEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLC 822 (833)
Q Consensus 759 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 822 (833)
|+..... ........... ....+..++..+.+++.+||+.+|++|||+.++++.|+
T Consensus 221 p~~~~~~--~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 221 PYQGLSN--EEVLKFVIDGG------HLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred CCccCCH--HHHHHHHhcCC------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 5431110 01111111110 01112234678899999999999999999999999876
No 195
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.1e-34 Score=305.60 Aligned_cols=267 Identities=23% Similarity=0.335 Sum_probs=202.4
Q ss_pred hcCCccCceeccCcceEEEEEEECC-------CceEEEEEEeeccC-CcchhHHHHHHHHHhhc-CCCccceEeeEeecC
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGE-------DEMIVAVKVINLKY-KGASRSFVAECEALRNI-RHRNLIKIITICSST 600 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 600 (833)
.++|.+.+.||+|+||.||+|++.. +...||+|.++... ......+.+|+++++.+ +||||+++++++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 4679999999999999999998643 23579999997542 22345688899999999 799999999997655
Q ss_pred CCCCCceEeEEEEecCCCChhhhhccCCCcc----------ccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCC
Q 040925 601 DFKGTDFKAFVFEYMENGSLKDWLHQSDDQV----------EVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKP 670 (833)
Q Consensus 601 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp 670 (833)
+ ..++||||+++|+|.+++....... ....+++.+++.++.|++.||+|||+. |++||||||
T Consensus 97 ~-----~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp 168 (307)
T cd05098 97 G-----PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAA 168 (307)
T ss_pred C-----ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccH
Confidence 4 7899999999999999997653210 112588999999999999999999999 999999999
Q ss_pred CCeeecCCCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccH
Q 040925 671 SNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSL 750 (833)
Q Consensus 671 ~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l 750 (833)
+||+++.++.+||+|||.++......... ......+++.|+|||++.+..++.++|||| +|+++
T Consensus 169 ~Nill~~~~~~kL~dfg~a~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws----------lG~~l 232 (307)
T cd05098 169 RNVLVTEDNVMKIADFGLARDIHHIDYYK------KTTNGRLPVKWMAPEALFDRIYTHQSDVWS----------FGVLL 232 (307)
T ss_pred HheEEcCCCcEEECCCcccccccccchhh------ccccCCCccceeChHHhccCCCCcHHHHHH----------HHHHH
Confidence 99999999999999999987654321110 011122457899999999888999999999 67777
Q ss_pred HHHHH-HhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhhhh
Q 040925 751 HEFAK-TALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRETF 828 (833)
Q Consensus 751 ~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~~~ 828 (833)
+++++ +..|+.... ............ ....+..++..+.+++.+||..+|++|||+.++++.|.++.+..
T Consensus 233 ~el~~~g~~p~~~~~---~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~ 303 (307)
T cd05098 233 WEIFTLGGSPYPGVP---VEELFKLLKEGH-----RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALT 303 (307)
T ss_pred HHHHcCCCCCCCcCC---HHHHHHHHHcCC-----CCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHh
Confidence 77776 555543211 111111111110 01112335668889999999999999999999999999988754
No 196
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.3e-34 Score=333.25 Aligned_cols=261 Identities=20% Similarity=0.272 Sum_probs=200.3
Q ss_pred HHHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC--CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCC
Q 040925 527 SKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKG 604 (833)
Q Consensus 527 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 604 (833)
....++|++.+.||+|+||.||+|++..++..||+|.+.... ......+..|+.++++++|||||++++++....
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~--- 85 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKA--- 85 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecC---
Confidence 345578999999999999999999999999999999987432 223467889999999999999999999875432
Q ss_pred CceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCC----CCceeeCCCCCCeeecC---
Q 040925 605 TDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQ----PPMVHGDLKPSNVLLDH--- 677 (833)
Q Consensus 605 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~----~~ivH~Dlkp~NIll~~--- 677 (833)
...+|+||||+++|+|.+++...... ...+++..++.|+.||+.||+|||+... .+||||||||+|||++.
T Consensus 86 ~~~lyIVMEY~~gGSL~~lL~k~~~~--~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~ 163 (1021)
T PTZ00266 86 NQKLYILMEFCDAGDLSRNIQKCYKM--FGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIR 163 (1021)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcc
Confidence 34789999999999999999753211 1168999999999999999999998510 25999999999999964
Q ss_pred --------------CCcEEEcccccccccCcccccccccCCCccccccccccccCccccCC--CCCCcccccccCCcCCC
Q 040925 678 --------------DMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG--SEASMTGDIFTGRRPID 741 (833)
Q Consensus 678 --------------~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di~s~~~~~~ 741 (833)
.+.+||+|||++..+..... .....||+.|+|||++.+ ..++.++||||
T Consensus 164 ~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~---------~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWS------ 228 (1021)
T PTZ00266 164 HIGKITAQANNLNGRPIAKIGDFGLSKNIGIESM---------AHSCVGTPYYWSPELLLHETKSYDDKSDMWA------ 228 (1021)
T ss_pred ccccccccccccCCCCceEEccCCcccccccccc---------ccccCCCccccCHHHHhccCCCCCchhHHHH------
Confidence 23589999999986543221 123469999999998854 45889999999
Q ss_pred ccccCCccHHHHHHHhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 742 AVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 742 ~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
+|+++|+++++..|+....... .+... +... ........+..+.++|..||..+|++|||+.|++.
T Consensus 229 ----LG~ILYELLTGk~PF~~~~~~~-qli~~-lk~~------p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 229 ----LGCIIYELCSGKTPFHKANNFS-QLISE-LKRG------PDLPIKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred ----HHHHHHHHHHCCCCCCcCCcHH-HHHHH-HhcC------CCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 8889999999999875322111 11111 1110 01111223567889999999999999999999985
No 197
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=3e-34 Score=312.16 Aligned_cols=262 Identities=18% Similarity=0.242 Sum_probs=196.7
Q ss_pred HHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC--cchhHHHHHHHHHhhcCCCccceEeeEeecCC-CCC
Q 040925 528 KATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNIRHRNLIKIITICSSTD-FKG 604 (833)
Q Consensus 528 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~ 604 (833)
...++|++.+.||+|+||.||+|.+..+++.||||++..... .....+.+|+.+++.++||||+++++++.... ...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 355789999999999999999999988999999999974422 23457788999999999999999999875443 123
Q ss_pred CceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEc
Q 040925 605 TDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVC 684 (833)
Q Consensus 605 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 684 (833)
....++||||+++ ++.+.+.. .+++..+..++.|+++||+|||+. ||+||||||+||+++.++.+||+
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~~--------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~ 161 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 161 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHhh--------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEe
Confidence 3467999999975 77777643 478889999999999999999999 99999999999999999999999
Q ss_pred ccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccc
Q 040925 685 DFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVME 764 (833)
Q Consensus 685 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~ 764 (833)
|||+++...... ......||+.|+|||++.+..++.++|||| +|+++++++++..|+...+
T Consensus 162 Dfg~~~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~Diws----------lG~il~el~~g~~pf~~~~ 222 (355)
T cd07874 162 DFGLARTAGTSF---------MMTPYVVTRYYRAPEVILGMGYKENVDIWS----------VGCIMGEMVRHKILFPGRD 222 (355)
T ss_pred eCcccccCCCcc---------ccCCccccCCccCHHHHcCCCCCchhhHHH----------HHHHHHHHHhCCCCCCCCC
Confidence 999998653321 112346899999999999999999999999 6777777777777654221
Q ss_pred cccc-------------cc-------hhhhccccc-----h--------hhhhhhhchHHHHHHHHHHhhccCCCCCCCC
Q 040925 765 IVDP-------------SL-------LMEVMTNNS-----M--------IQEDKRVKTEECLNAIIRTGVLCSMESPFER 811 (833)
Q Consensus 765 ~~~~-------------~~-------~~~~~~~~~-----~--------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 811 (833)
..+. .. ......... . ..+............+.+++.+|+..||++|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R 302 (355)
T cd07874 223 YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR 302 (355)
T ss_pred HHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhc
Confidence 1100 00 000000000 0 0000000111224567899999999999999
Q ss_pred CCHHHHHHH
Q 040925 812 MDMRDVVAK 820 (833)
Q Consensus 812 Pt~~eil~~ 820 (833)
||+.|+++.
T Consensus 303 ps~~ell~h 311 (355)
T cd07874 303 ISVDEALQH 311 (355)
T ss_pred CCHHHHhcC
Confidence 999999985
No 198
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=5.2e-34 Score=302.65 Aligned_cols=267 Identities=21% Similarity=0.306 Sum_probs=197.7
Q ss_pred hcCCccCceeccCcceEEEEEEECCCc----------------eEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccce
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDE----------------MIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIK 592 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~----------------~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~ 592 (833)
.++|++.+.||+|+||.||+|++...+ ..||+|.+..... ...+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 457999999999999999999876433 5689999875432 23567889999999999999999
Q ss_pred EeeEeecCCCCCCceEeEEEEecCCCChhhhhccCCCcc-----ccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeC
Q 040925 593 IITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQV-----EVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGD 667 (833)
Q Consensus 593 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-----~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~D 667 (833)
+++++...+ ..++||||+++++|.+++....... ....+++..++.++.|++.||+|||+. +|+|||
T Consensus 84 ~~~~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~d 155 (296)
T cd05051 84 LLGVCTVDP-----PLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRD 155 (296)
T ss_pred EEEEEecCC-----CcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccc
Confidence 999976544 7899999999999999997654110 112589999999999999999999999 999999
Q ss_pred CCCCCeeecCCCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCC
Q 040925 668 LKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEG 747 (833)
Q Consensus 668 lkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g 747 (833)
|||+||+++.++.++|+|||.++......... ......+++.|+|||++.+..++.++|||| +|
T Consensus 156 lkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s----------lG 219 (296)
T cd05051 156 LATRNCLVGKNYTIKIADFGMSRNLYSSDYYR------VQGRAPLPIRWMAWESVLLGKFTTKSDVWA----------FG 219 (296)
T ss_pred cchhceeecCCCceEEccccceeecccCccee------ecCcCCCCceecCHHHhhcCCCCccchhhh----------hH
Confidence 99999999999999999999987654322111 111234678999999998888999999999 67
Q ss_pred ccHHHHHH--HhCCCcccccccccchhhhccccc-hhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 040925 748 HSLHEFAK--TALPEKVMEIVDPSLLMEVMTNNS-MIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLC 822 (833)
Q Consensus 748 ~~l~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 822 (833)
++++++.+ +..|+.... +............ .........+..++.++.+++.+||+.||++|||+.||++.|+
T Consensus 220 ~~l~el~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 220 VTLWEILTLCREQPYEHLT--DQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HHHHHHHhcCCCCCCCCcC--hHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 77777766 334433111 1111110000000 0000001112234567999999999999999999999998875
No 199
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=4e-34 Score=296.69 Aligned_cols=251 Identities=23% Similarity=0.354 Sum_probs=194.5
Q ss_pred ceeccCcceEEEEEEECCCc---eEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEE
Q 040925 537 NMIGQGSFGYVYKGTLGEDE---MIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVF 612 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 612 (833)
++||+|+||.||+|++...+ ..||+|.++.... ...+.+.+|+.++++++||||+++++++.. ...++||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~~~~v~ 74 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG------EPLMLVM 74 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC------CceEEEE
Confidence 47999999999999875544 7899999875433 244678999999999999999999998642 2578999
Q ss_pred EecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccccc
Q 040925 613 EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL 692 (833)
Q Consensus 613 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 692 (833)
||+++|+|.+++.... .+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++..
T Consensus 75 e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~ 145 (257)
T cd05060 75 ELAPLGPLLKYLKKRR------EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRAL 145 (257)
T ss_pred EeCCCCcHHHHHHhCC------CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEecccccccee
Confidence 9999999999998654 589999999999999999999999 9999999999999999999999999999866
Q ss_pred CcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCcccccccccch
Q 040925 693 SDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEIVDPSLL 771 (833)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~~~~~~~ 771 (833)
....... .......++..|+|||...+..++.++|||| +|+.++++++ +..|+..... ....
T Consensus 146 ~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s----------lG~~l~~~~~~g~~p~~~~~~--~~~~ 208 (257)
T cd05060 146 GAGSDYY-----RATTAGRWPLKWYAPECINYGKFSSKSDVWS----------YGVTLWEAFSYGAKPYGEMKG--AEVI 208 (257)
T ss_pred ecCCccc-----ccccCccccccccCHHHhcCCCCCccchHHH----------HHHHHHHHHcCCCCCcccCCH--HHHH
Confidence 4322110 0011122456899999998888999999999 7777888876 6666542211 1111
Q ss_pred hhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhh
Q 040925 772 MEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTR 825 (833)
Q Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~ 825 (833)
.. ..... ....+..++..+.+++.+||..+|++|||+.++++.|+++.
T Consensus 209 ~~-~~~~~-----~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 209 AM-LESGE-----RLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred HH-HHcCC-----cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 11 11110 01122335678899999999999999999999999998764
No 200
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.6e-34 Score=305.21 Aligned_cols=268 Identities=23% Similarity=0.360 Sum_probs=201.0
Q ss_pred hcCCccCceeccCcceEEEEEEEC-------CCceEEEEEEeeccCC-cchhHHHHHHHHHhhc-CCCccceEeeEeecC
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLG-------EDEMIVAVKVINLKYK-GASRSFVAECEALRNI-RHRNLIKIITICSST 600 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~-------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 600 (833)
.++|.+.+.||+|+||.||+|+.. .....||+|.++.... .....+.+|+++++++ +||||+++++++...
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 457899999999999999999863 2356799999874322 2345688999999999 699999999997554
Q ss_pred CCCCCceEeEEEEecCCCChhhhhccCCCc----------cccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCC
Q 040925 601 DFKGTDFKAFVFEYMENGSLKDWLHQSDDQ----------VEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKP 670 (833)
Q Consensus 601 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp 670 (833)
. ..++||||+++|+|.+++...... .....+++.++..++.|++.||.|||+. ||+||||||
T Consensus 91 ~-----~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp 162 (314)
T cd05099 91 G-----PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAA 162 (314)
T ss_pred C-----ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---Ceeeccccc
Confidence 4 789999999999999999764321 0112588999999999999999999999 999999999
Q ss_pred CCeeecCCCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccH
Q 040925 671 SNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSL 750 (833)
Q Consensus 671 ~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l 750 (833)
+||+++.++.+||+|||.++........... ....+++.|||||++.+..++.++|||| +|+++
T Consensus 163 ~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Diws----------lG~~l 226 (314)
T cd05099 163 RNVLVTEDNVMKIADFGLARGVHDIDYYKKT------SNGRLPVKWMAPEALFDRVYTHQSDVWS----------FGILM 226 (314)
T ss_pred eeEEEcCCCcEEEcccccccccccccccccc------ccCCCCccccCHHHHccCCcCccchhhH----------HHHHH
Confidence 9999999999999999999866432211100 0112456899999998888999999999 67777
Q ss_pred HHHHH-HhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhhhhh
Q 040925 751 HEFAK-TALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRETFL 829 (833)
Q Consensus 751 ~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~~~~ 829 (833)
+++++ +..|+.... ............ ....+..++.++.+++.+||..||++|||+.|+++.|.++.....
T Consensus 227 ~el~~~g~~p~~~~~---~~~~~~~~~~~~-----~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~ 298 (314)
T cd05099 227 WEIFTLGGSPYPGIP---VEELFKLLREGH-----RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAVS 298 (314)
T ss_pred HHHHhCCCCCCCCCC---HHHHHHHHHcCC-----CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHhc
Confidence 77776 555543211 111111111100 001122345678899999999999999999999999999886543
No 201
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2e-34 Score=303.67 Aligned_cols=261 Identities=21% Similarity=0.308 Sum_probs=197.7
Q ss_pred cCCccCceeccCcceEEEEEEECC-----CceEEEEEEeeccCCc-chhHHHHHHHHHhhcCCCccceEeeEeecCCCCC
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGE-----DEMIVAVKVINLKYKG-ASRSFVAECEALRNIRHRNLIKIITICSSTDFKG 604 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 604 (833)
.+|++.+.||+|+||.||+|.+.. .+..||+|+++..... ..+.+.+|+.+++.++||||+++++++....
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~--- 81 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQ--- 81 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCC---
Confidence 357888999999999999998753 3578999999744332 2356889999999999999999999976554
Q ss_pred CceEeEEEEecCCCChhhhhccCCCc----------cccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCee
Q 040925 605 TDFKAFVFEYMENGSLKDWLHQSDDQ----------VEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVL 674 (833)
Q Consensus 605 ~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIl 674 (833)
..++++||+++++|.+++...... .....+++..++.++.|++.||+|+|+. +|+||||||+||+
T Consensus 82 --~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil 156 (283)
T cd05091 82 --PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVL 156 (283)
T ss_pred --ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheE
Confidence 789999999999999998632110 1122578899999999999999999999 9999999999999
Q ss_pred ecCCCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHH
Q 040925 675 LDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFA 754 (833)
Q Consensus 675 l~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~ 754 (833)
+++++.+||+|||+++......... ......+++.|+|||++.+..++.++|||| +|+++++++
T Consensus 157 ~~~~~~~kl~Dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s----------lG~~l~el~ 220 (283)
T cd05091 157 VFDKLNVKISDLGLFREVYAADYYK------LMGNSLLPIRWMSPEAIMYGKFSIDSDIWS----------YGVVLWEVF 220 (283)
T ss_pred ecCCCceEecccccccccccchhee------eccCccCCccccCHHHHhcCCCCcchhHHH----------HHHHHHHHH
Confidence 9999999999999988654322111 111234678999999998888999999999 677777777
Q ss_pred H-HhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 040925 755 K-TALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCH 823 (833)
Q Consensus 755 ~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 823 (833)
+ +..|+.... ............ ....+.+++..+.+++.+||+.+|++||++++|++.|+.
T Consensus 221 ~~g~~p~~~~~--~~~~~~~i~~~~------~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 221 SYGLQPYCGYS--NQDVIEMIRNRQ------VLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred cCCCCCCCCCC--HHHHHHHHHcCC------cCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 6 444543111 011111111111 111234567788999999999999999999999998864
No 202
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=4.4e-34 Score=296.29 Aligned_cols=249 Identities=24% Similarity=0.323 Sum_probs=192.9
Q ss_pred eeccCcceEEEEEEE--CCCceEEEEEEeeccCC--cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEEE
Q 040925 538 MIGQGSFGYVYKGTL--GEDEMIVAVKVINLKYK--GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFE 613 (833)
Q Consensus 538 ~lg~G~~g~Vy~~~~--~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 613 (833)
.||+|+||.||+|.+ ..++..||+|+++.... ...+.+.+|+.+++.++||||+++++++.. ...++|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~~~~lv~e 75 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA------ESWMLVME 75 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC------CCcEEEEe
Confidence 689999999999965 45678999999864432 234678999999999999999999998642 25689999
Q ss_pred ecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccC
Q 040925 614 YMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLS 693 (833)
Q Consensus 614 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 693 (833)
|+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 ~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~ 146 (257)
T cd05116 76 LAELGPLNKFLQKNK------HVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALG 146 (257)
T ss_pred cCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccC
Confidence 999999999997643 689999999999999999999999 99999999999999999999999999998664
Q ss_pred cccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCcccccccccchh
Q 040925 694 DHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEIVDPSLLM 772 (833)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~~~~~~~~ 772 (833)
...... .......+++.|+|||.+....++.++|||| +|+.++++++ +..|+..... ....
T Consensus 147 ~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s----------lG~~l~el~t~g~~p~~~~~~---~~~~ 208 (257)
T cd05116 147 ADENYY-----KAKTHGKWPVKWYAPECMNYYKFSSKSDVWS----------FGVLMWEAFSYGQKPYKGMKG---NEVT 208 (257)
T ss_pred CCCCee-----eecCCCCCCccccCHhHhccCCcCchhHHHH----------HHHHHHHHHhCCCCCCCCCCH---HHHH
Confidence 332110 0011123568999999998888999999999 7888888887 7777652211 1111
Q ss_pred hhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 040925 773 EVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHT 824 (833)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i 824 (833)
+.+..... ...+..++..+.+++.+||+.||++||++++|.+.|++.
T Consensus 209 ~~i~~~~~-----~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 209 QMIESGER-----MECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred HHHHCCCC-----CCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 11111110 011223567789999999999999999999999998764
No 203
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=4.3e-34 Score=302.08 Aligned_cols=263 Identities=22% Similarity=0.346 Sum_probs=199.4
Q ss_pred CCccCceeccCcceEEEEEEECC-----CceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCC
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGE-----DEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGT 605 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 605 (833)
+|++.+.||+|+||.||+|+... ....+|+|.+..... ...+.+.+|+.+++.++||||+++++.+...+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---- 76 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDG---- 76 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC----
Confidence 47888999999999999998743 235789998864432 23457889999999999999999999876554
Q ss_pred ceEeEEEEecCCCChhhhhccCCCc------------------cccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeC
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQ------------------VEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGD 667 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~------------------~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~D 667 (833)
..++||||+++|+|.+++...... .....+++..++.++.|++.||+|||+. +|+|||
T Consensus 77 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~d 152 (290)
T cd05045 77 -PLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRD 152 (290)
T ss_pred -CcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhh
Confidence 689999999999999998653211 0112578999999999999999999999 999999
Q ss_pred CCCCCeeecCCCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCC
Q 040925 668 LKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEG 747 (833)
Q Consensus 668 lkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g 747 (833)
|||+||++++++.+||+|||+++......... ......++..|+|||+..+..++.++|||| +|
T Consensus 153 ikp~nill~~~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~~~y~apE~~~~~~~~~~~Di~s----------lG 216 (290)
T cd05045 153 LAARNVLVAEGRKMKISDFGLSRDVYEEDSYV------KRSKGRIPVKWMAIESLFDHIYTTQSDVWS----------FG 216 (290)
T ss_pred hhhheEEEcCCCcEEeccccccccccCccchh------cccCCCCCccccCHHHHccCCcchHhHHHH----------HH
Confidence 99999999999999999999997653322110 111234677899999998888999999999 77
Q ss_pred ccHHHHHH-HhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhh
Q 040925 748 HSLHEFAK-TALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRE 826 (833)
Q Consensus 748 ~~l~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~ 826 (833)
+.++++++ +..|+.... +....+...... ....+..++..+.+++.+||+.+|++||+++|+++.|+++..
T Consensus 217 ~~l~el~t~g~~p~~~~~---~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 217 VLLWEIVTLGGNPYPGIA---PERLFNLLKTGY-----RMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred HHHHHHHhcCCCCCCCCC---HHHHHHHHhCCC-----CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 77888887 666653211 111111111110 011122345678899999999999999999999999998864
No 204
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=5.1e-34 Score=295.80 Aligned_cols=251 Identities=29% Similarity=0.419 Sum_probs=198.9
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
.++|++.+.||+|++|.||+|... ++.||+|.++.... ..+.+.+|+.++++++|+||+++++++... ...+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 76 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQG-----NPLY 76 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCC-----CCeE
Confidence 457899999999999999999884 78899999975533 457889999999999999999999997553 3789
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||+++++|.+++...... .+++..+..++.|++.|+.|||+. +++||||||+||+++.++.+||+|||.+
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~ 149 (256)
T cd05039 77 IVTEYMAKGSLVDYLRSRGRA----VITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLA 149 (256)
T ss_pred EEEEecCCCcHHHHHHhcCCC----CCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccc
Confidence 999999999999999765422 589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCcccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEIVDP 768 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~~~~ 768 (833)
+....... ...++..|+|||++.+..++.++|||| +|++++++++ +..|+.....
T Consensus 150 ~~~~~~~~-----------~~~~~~~~~ape~~~~~~~~~~~Di~s----------lG~il~~l~~~g~~p~~~~~~--- 205 (256)
T cd05039 150 KEASQGQD-----------SGKLPVKWTAPEALREKKFSTKSDVWS----------FGILLWEIYSFGRVPYPRIPL--- 205 (256)
T ss_pred cccccccc-----------cCCCcccccCchhhcCCcCCcHHHHHH----------HHHHHHHHHhcCCCCCCCCCH---
Confidence 86633211 122466799999998888999999999 6777777776 6666542211
Q ss_pred cchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 040925 769 SLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHT 824 (833)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i 824 (833)
........... ....+..+++.+.+++.+||..+|++|||++|++++|+.+
T Consensus 206 ~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 206 KDVVPHVEKGY-----RMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred HHHHHHHhcCC-----CCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 11111111110 0011223467789999999999999999999999998753
No 205
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=5e-34 Score=309.01 Aligned_cols=261 Identities=22% Similarity=0.276 Sum_probs=195.2
Q ss_pred HHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC--cchhHHHHHHHHHhhcCCCccceEeeEeecCCC-CC
Q 040925 528 KATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNIRHRNLIKIITICSSTDF-KG 604 (833)
Q Consensus 528 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~ 604 (833)
...++|++.+.||+|+||.||+|.+..+++.||||++..... ...+.+.+|++++++++||||+++++++..... ..
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 345789999999999999999999998999999999864322 233567789999999999999999998754321 22
Q ss_pred CceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEc
Q 040925 605 TDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVC 684 (833)
Q Consensus 605 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 684 (833)
....+++||++ +++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~ 160 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKCQ-------KLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRIL 160 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEc
Confidence 24578999998 67999888643 589999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccc
Q 040925 685 DFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVM 763 (833)
Q Consensus 685 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~ 763 (833)
|||+++..... .....||+.|+|||++.+ ..++.++|||| .|+++++++++..|+...
T Consensus 161 Dfg~~~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~~Diws----------lG~il~el~~g~~pf~~~ 219 (343)
T cd07878 161 DFGLARQADDE-----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWS----------VGCIMAELLKGKALFPGN 219 (343)
T ss_pred CCccceecCCC-----------cCCccccccccCchHhcCCccCCchhhhHh----------HHHHHHHHHHCCCCCCCC
Confidence 99999865331 123468999999999876 56899999999 777888888887765422
Q ss_pred ccccc-------------cchhh--------hccccc-hhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 764 EIVDP-------------SLLME--------VMTNNS-MIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 764 ~~~~~-------------~~~~~--------~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
+..+. ..... ...... ..............+.+.+++.+|++.||++|||+.|+++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 220 DYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred CHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 11100 00000 000000 00000000001123457899999999999999999999875
No 206
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=4.5e-34 Score=296.10 Aligned_cols=251 Identities=29% Similarity=0.367 Sum_probs=195.8
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
..+|++.+.||+|++|.||+|... +..||+|.++.. ...+.+.+|+.++++++|++++++++++... ....+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~~ 76 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE----KGGLY 76 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcC----CCceE
Confidence 347899999999999999999874 678999998633 2356789999999999999999999976432 24689
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||+++|+|.+++...... .+++..++.++.|++.||+|||+. |++||||||+||++++++.+||+|||++
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~ 149 (256)
T cd05082 77 IVTEYMAKGSLVDYLRSRGRS----VLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLT 149 (256)
T ss_pred EEEECCCCCcHHHHHHhcCCC----CCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccc
Confidence 999999999999999765432 578999999999999999999999 9999999999999999999999999998
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCcccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEIVDP 768 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~~~~ 768 (833)
....... ....++..|+|||++.+..++.++|||| +|++++++++ +..|+......
T Consensus 150 ~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~Dv~s----------lG~i~~~l~~~g~~p~~~~~~~-- 206 (256)
T cd05082 150 KEASSTQ-----------DTGKLPVKWTAPEALREKKFSTKSDVWS----------FGILLWEIYSFGRVPYPRIPLK-- 206 (256)
T ss_pred eeccccC-----------CCCccceeecCHHHHccCCCCchhhhHH----------HHHHHHHHHhCCCCCCCCCCHH--
Confidence 7543311 1123567899999998888999999999 6777777776 66665321110
Q ss_pred cchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 040925 769 SLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHT 824 (833)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i 824 (833)
.... ...... .......++..+.+++.+||..+|++|||+.++++.|+++
T Consensus 207 ~~~~-~~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 207 DVVP-RVEKGY-----KMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred HHHH-HHhcCC-----CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 0000 000000 0011233567889999999999999999999999998764
No 207
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=6.9e-34 Score=296.01 Aligned_cols=254 Identities=24% Similarity=0.294 Sum_probs=203.0
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeE
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAF 610 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 610 (833)
++|++.+.||.|++|.||+|.+..+++.+|+|.+........+.+.+|++++++++||||+++++++.... ..++
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~l 77 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRD-----KLWI 77 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCC-----EEEE
Confidence 57999999999999999999998889999999998665556678999999999999999999999875544 8999
Q ss_pred EEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccc
Q 040925 611 VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690 (833)
Q Consensus 611 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 690 (833)
+|||+++++|.+++..... .+++.++..++.|++.||+|||+. +|+|+||||+||++++++.+||+|||.+.
T Consensus 78 ~~e~~~~~~l~~~~~~~~~-----~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~ 149 (262)
T cd06613 78 VMEYCGGGSLQDIYQVTRG-----PLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSA 149 (262)
T ss_pred EEeCCCCCcHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccch
Confidence 9999999999999876521 689999999999999999999999 99999999999999999999999999987
Q ss_pred ccCcccccccccCCCccccccccccccCccccCCC---CCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc
Q 040925 691 FLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS---EASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD 767 (833)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~ 767 (833)
....... ......|+..|+|||.+.+. .++.++|+|| +|+.+++++++..|+.......
T Consensus 150 ~~~~~~~--------~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~s----------lG~~l~~~~tg~~p~~~~~~~~ 211 (262)
T cd06613 150 QLTATIA--------KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWA----------LGITAIELAELQPPMFDLHPMR 211 (262)
T ss_pred hhhhhhh--------ccccccCCccccCchhhcccccCCcCchhhhHH----------HHHHHHHHHhCCCCCCCCCHHH
Confidence 6543211 11224588999999998776 7899999999 8888999999988865222111
Q ss_pred ccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 768 PSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
... ....... ...........+..+.+++.+||..||++|||+.+|+.
T Consensus 212 ~~~--~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 212 ALF--LISKSNF--PPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred HHH--HHHhccC--CCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 100 0000000 00011122345667899999999999999999999975
No 208
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=6.7e-34 Score=295.49 Aligned_cols=254 Identities=26% Similarity=0.441 Sum_probs=198.1
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
.++|.+.+.||+|++|.||+|.+..+ ..||+|.+.... ...+.+.+|++++++++|||++++++++.. ...+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~~ 76 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE------EPIY 76 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC------CCcE
Confidence 35689999999999999999998744 469999886432 334678899999999999999999988632 2578
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||+++|+|.+++...... .+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||.+
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~----~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~ 149 (260)
T cd05069 77 IVTEFMGKGSLLDFLKEGDGK----YLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLA 149 (260)
T ss_pred EEEEcCCCCCHHHHHhhCCCC----CCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccc
Confidence 999999999999999764321 578999999999999999999999 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCcccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEIVDP 768 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~~~~ 768 (833)
.......... .....++..|+|||+..+..++.++|||| +|++++++++ +..|+.... +.
T Consensus 150 ~~~~~~~~~~-------~~~~~~~~~y~~Pe~~~~~~~~~~~Di~s----------lG~~l~el~t~g~~p~~~~~--~~ 210 (260)
T cd05069 150 RLIEDNEYTA-------RQGAKFPIKWTAPEAALYGRFTIKSDVWS----------FGILLTELVTKGRVPYPGMV--NR 210 (260)
T ss_pred eEccCCcccc-------cCCCccchhhCCHHHhccCCcChHHHHHH----------HHHHHHHHHhCCCCCCCCCC--HH
Confidence 7654322111 11223678899999998888999999999 7888888888 676654211 11
Q ss_pred cchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 040925 769 SLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCH 823 (833)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 823 (833)
..... ..... ....+.+.+..+.+++.+||..||++||++++|++.|++
T Consensus 211 ~~~~~-~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 211 EVLEQ-VERGY-----RMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HHHHH-HHcCC-----CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 11111 11110 011123456788999999999999999999999999875
No 209
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=5.7e-34 Score=299.91 Aligned_cols=251 Identities=20% Similarity=0.314 Sum_probs=196.7
Q ss_pred CccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEE
Q 040925 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVF 612 (833)
Q Consensus 533 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 612 (833)
|++.+.||+|+||.||+|.+..++..+|+|.+........+.+.+|+++++.++||||+++++++.... ..++||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~-----~~~~v~ 81 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN-----NLWILI 81 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCC-----EEEEEE
Confidence 678899999999999999999899999999997554445567889999999999999999999976544 889999
Q ss_pred EecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccccc
Q 040925 613 EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL 692 (833)
Q Consensus 613 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 692 (833)
||+++|+|.+++..... ++++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++...
T Consensus 82 e~~~~~~l~~~~~~~~~-----~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~ 153 (282)
T cd06643 82 EFCAGGAVDAVMLELER-----PLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKN 153 (282)
T ss_pred EecCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccc
Confidence 99999999998765321 689999999999999999999999 9999999999999999999999999998754
Q ss_pred CcccccccccCCCccccccccccccCccccC-----CCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc
Q 040925 693 SDHQLDTAVKTPSSSIGLKGTVGYVAPEYGM-----GSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD 767 (833)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~ 767 (833)
.... .......||+.|+|||++. +..++.++|||| +|+++++++++..|+.....
T Consensus 154 ~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~s----------lGvil~el~~g~~p~~~~~~-- 213 (282)
T cd06643 154 TRTI--------QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWS----------LGITLIEMAQIEPPHHELNP-- 213 (282)
T ss_pred cccc--------cccccccccccccCHhhccccCCCCCCCCccchhhh----------HHHHHHHHccCCCCccccCH--
Confidence 3221 1112346899999999873 455788999999 77888888888777642211
Q ss_pred ccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 768 PSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
............ .....+..++..+.+++.+||+.||++|||+.++++.
T Consensus 214 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 214 MRVLLKIAKSEP----PTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred HHHHHHHhhcCC----CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111111111100 0011122345678999999999999999999998764
No 210
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.7e-34 Score=302.08 Aligned_cols=251 Identities=22% Similarity=0.285 Sum_probs=202.5
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeE
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAF 610 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 610 (833)
.+|++.+.||.|++|.||+|.+..+++.||+|.+........+.+.+|+.+++.++||||+++++++...+ ..++
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~~~l 93 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGD-----ELFV 93 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCc-----eEEE
Confidence 46999999999999999999998899999999997655555677899999999999999999999976544 8999
Q ss_pred EEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccc
Q 040925 611 VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690 (833)
Q Consensus 611 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 690 (833)
||||+++++|.+++... .+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++.
T Consensus 94 v~e~~~~~~L~~~~~~~-------~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~ 163 (296)
T cd06655 94 VMEYLAGGSLTDVVTET-------CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCA 163 (296)
T ss_pred EEEecCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccch
Confidence 99999999999998643 588999999999999999999999 99999999999999999999999999987
Q ss_pred ccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccc
Q 040925 691 FLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSL 770 (833)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~ 770 (833)
....... ......|++.|+|||.+.+..++.++|||| +|+++++++++..|+...+..+...
T Consensus 164 ~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s----------lGvil~~lltg~~pf~~~~~~~~~~ 225 (296)
T cd06655 164 QITPEQS--------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWS----------LGIMAIEMVEGEPPYLNENPLRALY 225 (296)
T ss_pred hcccccc--------cCCCcCCCccccCcchhcCCCCCchhhHHH----------HHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 6543211 111245899999999998888999999999 7888899999888875332211100
Q ss_pred hhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 771 LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
. ..... ......+..++..+.+++.+||..||++|||+.+++..
T Consensus 226 ~--~~~~~----~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 226 L--IATNG----TPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred H--HHhcC----CcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 0 00000 00011123356678899999999999999999999865
No 211
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=4.2e-34 Score=300.96 Aligned_cols=253 Identities=21% Similarity=0.277 Sum_probs=197.3
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceE
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
.|+..+.||+|+||+||+|.+..+++.||+|.++... ......+.+|++++++++|++|+++++++...+ ..
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~-----~~ 75 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKD-----AL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCC-----EE
Confidence 3677889999999999999999999999999986432 122345788999999999999999998865544 89
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
++||||+++|+|.+++...... .+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||+
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~ 148 (285)
T cd05632 76 CLVLTIMNGGDLKFHIYNMGNP----GFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGL 148 (285)
T ss_pred EEEEEeccCccHHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCc
Confidence 9999999999999988654322 689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccc
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDP 768 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~ 768 (833)
+........ .....|++.|+|||++.+..++.++|+|| +|+++++++++..|+......
T Consensus 149 ~~~~~~~~~---------~~~~~g~~~~~aPE~~~~~~~~~~~Di~s----------lG~~l~~l~~g~~P~~~~~~~-- 207 (285)
T cd05632 149 AVKIPEGES---------IRGRVGTVGYMAPEVLNNQRYTLSPDYWG----------LGCLIYEMIEGQSPFRGRKEK-- 207 (285)
T ss_pred ceecCCCCc---------ccCCCCCcCccChHHhcCCCCCcccchHH----------HHHHHHHHHhCCCCCCCCCHH--
Confidence 875432211 12246899999999999889999999999 788899999999887532110
Q ss_pred cchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCC-----HHHHHHH
Q 040925 769 SLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMD-----MRDVVAK 820 (833)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~eil~~ 820 (833)
...+.+.... ..........++..+.+++..||+.||++||+ ++++++.
T Consensus 208 -~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 208 -VKREEVDRRV--LETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred -HHHHHHHHhh--hccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 0000000000 00011112334567889999999999999999 6677664
No 212
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=4.4e-34 Score=303.25 Aligned_cols=260 Identities=22% Similarity=0.384 Sum_probs=199.4
Q ss_pred hcCCccCceeccCcceEEEEEEE-----CCCceEEEEEEeeccCC-cchhHHHHHHHHHhhc-CCCccceEeeEeecCCC
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTL-----GEDEMIVAVKVINLKYK-GASRSFVAECEALRNI-RHRNLIKIITICSSTDF 602 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 602 (833)
.++|.+.+.||+|+||.||+|+. ..++..||+|.++.... ...+.+.+|+++++++ +||||+++++++...+
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~- 112 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG- 112 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC-
Confidence 35799999999999999999975 33566899999874432 2345788999999999 7999999999976554
Q ss_pred CCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEE
Q 040925 603 KGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH 682 (833)
Q Consensus 603 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 682 (833)
..++||||+++|+|.+++...... .+++.++..++.|++.||+|||+. +|+|+||||+||+++.++.+|
T Consensus 113 ----~~~lv~e~~~~~~L~~~i~~~~~~----~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~ 181 (302)
T cd05055 113 ----PILVITEYCCYGDLLNFLRRKRES----FLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVK 181 (302)
T ss_pred ----ceEEEEEcCCCCcHHHHHHhCCCC----CCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEE
Confidence 789999999999999999764321 489999999999999999999999 999999999999999999999
Q ss_pred EcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCc
Q 040925 683 VCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEK 761 (833)
Q Consensus 683 L~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~ 761 (833)
++|||+++......... ......+++.|+|||++.+..++.++|||| +|++++++++ +..|+.
T Consensus 182 l~dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws----------lGvil~el~t~g~~p~~ 245 (302)
T cd05055 182 ICDFGLARDIMNDSNYV------VKGNARLPVKWMAPESIFNCVYTFESDVWS----------YGILLWEIFSLGSNPYP 245 (302)
T ss_pred ECCCcccccccCCCcee------ecCCCCcccccCCHhhhccCCCCcHhHHHH----------HHHHHHHHHhCCCCCcC
Confidence 99999998654322100 011234678899999999888999999999 7777888876 666653
Q ss_pred ccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 040925 762 VMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHT 824 (833)
Q Consensus 762 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i 824 (833)
.... +... ........ ........+..+.+++.+||..+|++|||+.|+++.|+++
T Consensus 246 ~~~~-~~~~-~~~~~~~~-----~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 246 GMPV-DSKF-YKLIKEGY-----RMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred CCCc-hHHH-HHHHHcCC-----cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 2111 1111 00000000 0001112346788999999999999999999999999874
No 213
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=3.1e-34 Score=302.71 Aligned_cols=266 Identities=22% Similarity=0.339 Sum_probs=198.9
Q ss_pred HHhcCCccCceeccCcceEEEEEEECC-----CceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCC
Q 040925 528 KATGEFSSSNMIGQGSFGYVYKGTLGE-----DEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTD 601 (833)
Q Consensus 528 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 601 (833)
...++|++.+.||+|+||.||+|..++ .+..||+|.++.... .....+.+|+.++++++||||+++++++....
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ 82 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 346789999999999999999997642 356899999864322 22346788999999999999999999975544
Q ss_pred CCCCceEeEEEEecCCCChhhhhccCCCcc----ccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecC
Q 040925 602 FKGTDFKAFVFEYMENGSLKDWLHQSDDQV----EVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDH 677 (833)
Q Consensus 602 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~ 677 (833)
..++||||+++|+|.+++....... .....++..+..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 83 -----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~ 154 (288)
T cd05061 83 -----PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAH 154 (288)
T ss_pred -----CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcC
Confidence 7899999999999999997543211 112456788899999999999999999 9999999999999999
Q ss_pred CCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-H
Q 040925 678 DMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-T 756 (833)
Q Consensus 678 ~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~ 756 (833)
++.+||+|||+++.......... .....++..|+|||.+.+..++.++|||| +|++++++.+ +
T Consensus 155 ~~~~~L~Dfg~~~~~~~~~~~~~------~~~~~~~~~y~~pE~~~~~~~~~~~Dvws----------lG~~l~el~~~~ 218 (288)
T cd05061 155 DFTVKIGDFGMTRDIYETDYYRK------GGKGLLPVRWMAPESLKDGVFTTSSDMWS----------FGVVLWEITSLA 218 (288)
T ss_pred CCcEEECcCCccccccccccccc------cCCCcccccccCHHHhccCCCChHhHHHH----------HHHHHHHHHhCC
Confidence 99999999999986543221110 11123577899999998888999999999 6777777776 4
Q ss_pred hCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhh
Q 040925 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTR 825 (833)
Q Consensus 757 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~ 825 (833)
..|+..... ........... ....+..++..+.+++.+||+.||++|||+.++++.+++..
T Consensus 219 ~~p~~~~~~--~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 219 EQPYQGLSN--EQVLKFVMDGG------YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred CCCCCCCCH--HHHHHHHHcCC------CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 555432111 11111000000 00112234568999999999999999999999999988754
No 214
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=4.4e-34 Score=296.87 Aligned_cols=240 Identities=21% Similarity=0.377 Sum_probs=182.8
Q ss_pred ceeccCcceEEEEEEECC------------CceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCC
Q 040925 537 NMIGQGSFGYVYKGTLGE------------DEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKG 604 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~------------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 604 (833)
+.||+|+||.||+|+... ....||+|.+..........+.+|+.+++.++||||+++++++....
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~--- 77 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDV--- 77 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC---
Confidence 468999999999998642 23468999886554445567889999999999999999999976554
Q ss_pred CceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCc----
Q 040925 605 TDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMV---- 680 (833)
Q Consensus 605 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~---- 680 (833)
..++||||+++|+|..++..... .+++..++.++.|+++||+|||+. +|+||||||+||+++.++.
T Consensus 78 --~~~lv~e~~~~~~l~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~ 147 (262)
T cd05077 78 --ENIMVEEFVEFGPLDLFMHRKSD-----VLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGEC 147 (262)
T ss_pred --CCEEEEecccCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCC
Confidence 67899999999999998875432 589999999999999999999999 9999999999999987664
Q ss_pred ---EEEcccccccccCcccccccccCCCccccccccccccCccccC-CCCCCcccccccCCcCCCccccCCccHHHHH-H
Q 040925 681 ---AHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGM-GSEASMTGDIFTGRRPIDAVFNEGHSLHEFA-K 755 (833)
Q Consensus 681 ---~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~-~ 755 (833)
+|++|||.+....... ...|+..|+|||++. +..++.++|||| +|+++|+++ .
T Consensus 148 ~~~~~l~d~g~~~~~~~~~------------~~~~~~~y~aPE~~~~~~~~~~~~Diws----------lG~~l~el~~~ 205 (262)
T cd05077 148 GPFIKLSDPGIPITVLSRQ------------ECVERIPWIAPECVEDSKNLSIAADKWS----------FGTTLWEICYN 205 (262)
T ss_pred CceeEeCCCCCCccccCcc------------cccccccccChhhhcCCCCCCchhHHHH----------HHHHHHHHHhC
Confidence 8999999987543211 234788999999876 466899999999 677777776 3
Q ss_pred HhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 040925 756 TALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKL 821 (833)
Q Consensus 756 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 821 (833)
+..|+......+. ........ .......+.+.+++.+||+.||++||++.+|++.+
T Consensus 206 ~~~p~~~~~~~~~---~~~~~~~~-------~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 206 GEIPLKDKTLAEK---ERFYEGQC-------MLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred CCCCCCCcchhHH---HHHHhcCc-------cCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 5555432111110 00000000 00111245688999999999999999999998875
No 215
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=5e-34 Score=296.50 Aligned_cols=254 Identities=24% Similarity=0.450 Sum_probs=199.7
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
.++|++.++||+|+||.||+|... +++.||+|.+.... ...+.+.+|+.++++++||||+++++++.. ...+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~~ 76 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVTQ------EPIY 76 (260)
T ss_pred hHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEcc------CCcE
Confidence 457999999999999999999876 67789999987433 345678999999999999999999987532 2579
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
++|||+++|+|.+++...... .+++.++..++.|++.||+|||+. +++||||||+||++++++.++|+|||.+
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~----~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~ 149 (260)
T cd05067 77 IITEYMENGSLVDFLKTPEGI----KLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLA 149 (260)
T ss_pred EEEEcCCCCCHHHHHHhcCCC----CCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcce
Confidence 999999999999998764422 689999999999999999999999 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCcccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEIVDP 768 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~~~~ 768 (833)
.......... .....++..|+|||++.+..++.++|||| +|++++++++ +..|+.... ++
T Consensus 150 ~~~~~~~~~~-------~~~~~~~~~y~~pe~~~~~~~~~~~Di~s----------lG~~l~el~~~g~~p~~~~~--~~ 210 (260)
T cd05067 150 RLIEDNEYTA-------REGAKFPIKWTAPEAINYGTFTIKSDVWS----------FGILLTEIVTYGRIPYPGMT--NP 210 (260)
T ss_pred eecCCCCccc-------ccCCcccccccCHHHhccCCcCcccchHH----------HHHHHHHHHhCCCCCCCCCC--hH
Confidence 7654322111 11234678899999998888999999999 7888888887 777764221 11
Q ss_pred cchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 040925 769 SLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCH 823 (833)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 823 (833)
...... .... ....+...+.++.+++.+||..+|++|||++++++.|+.
T Consensus 211 ~~~~~~-~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 211 EVIQNL-ERGY-----RMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred HHHHHH-HcCC-----CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 111111 1110 001122345679999999999999999999999998874
No 216
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=6.3e-34 Score=301.15 Aligned_cols=253 Identities=22% Similarity=0.295 Sum_probs=199.4
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeE
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAF 610 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 610 (833)
+.|++.+.||+|+||.||+|++..+++.||+|.+........+.+.+|+.+++.++||||+++++++.... ..++
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~l 86 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDG-----KLWI 86 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCC-----eEEE
Confidence 57999999999999999999999899999999997665555677889999999999999999999876544 8999
Q ss_pred EEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccc
Q 040925 611 VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690 (833)
Q Consensus 611 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 690 (833)
||||+++++|..++.+... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++.
T Consensus 87 v~e~~~~~~l~~~~~~~~~-----~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~ 158 (292)
T cd06644 87 MIEFCPGGAVDAIMLELDR-----GLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSA 158 (292)
T ss_pred EEecCCCCcHHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccce
Confidence 9999999999988765432 589999999999999999999999 99999999999999999999999999987
Q ss_pred ccCcccccccccCCCccccccccccccCccccC-----CCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccc
Q 040925 691 FLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGM-----GSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEI 765 (833)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~ 765 (833)
...... .......+++.|+|||++. ...++.++|||| +|+++|+++++..|+.....
T Consensus 159 ~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~s----------lG~il~el~~g~~p~~~~~~ 220 (292)
T cd06644 159 KNVKTL--------QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWS----------LGITLIEMAQIEPPHHELNP 220 (292)
T ss_pred eccccc--------cccceecCCccccCceeeccccccCCCCCchhhhHh----------HHHHHHHHhcCCCCCccccH
Confidence 543211 1112345889999999874 345788899999 88888899998888653221
Q ss_pred ccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 766 VDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
. ........... .....+..++..+.+++.+||..||++||+++|+++.
T Consensus 221 ~--~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 221 M--RVLLKIAKSEP----PTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred H--HHHHHHhcCCC----ccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 1 01111110000 0011123345678899999999999999999999764
No 217
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=8.6e-34 Score=296.13 Aligned_cols=254 Identities=22% Similarity=0.325 Sum_probs=199.9
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcc---------hhHHHHHHHHHhhcCCCccceEeeEeecCCC
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGA---------SRSFVAECEALRNIRHRNLIKIITICSSTDF 602 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~---------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 602 (833)
+|.+.+.||+|++|.||+|.+..+++.||+|.+....... .+.+.+|+.++++++||||+++++++...+
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~- 79 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDAD- 79 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC-
Confidence 4788899999999999999998889999999986443221 246788999999999999999999976544
Q ss_pred CCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEE
Q 040925 603 KGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH 682 (833)
Q Consensus 603 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 682 (833)
..++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +++||||+|+||++++++.+|
T Consensus 80 ----~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~ 146 (267)
T cd06628 80 ----HLNIFLEYVPGGSVAALLNNYG------AFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIK 146 (267)
T ss_pred ----ccEEEEEecCCCCHHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEE
Confidence 8899999999999999997654 688999999999999999999999 999999999999999999999
Q ss_pred EcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcc
Q 040925 683 VCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKV 762 (833)
Q Consensus 683 L~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~ 762 (833)
|+|||.++........... ........|++.|+|||++.+..++.++|+|| .|+++++++++..|+..
T Consensus 147 l~dfg~~~~~~~~~~~~~~--~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~s----------lG~il~~l~~g~~p~~~ 214 (267)
T cd06628 147 ISDFGISKKLEANSLSTKT--NGARPSLQGSVFWMAPEVVKQTSYTRKADIWS----------LGCLVVEMLTGKHPFPD 214 (267)
T ss_pred ecccCCCcccccccccCCc--cccccccCCCcCccChhHhccCCCCchhhhHH----------HHHHHHHHhhCCCCCCC
Confidence 9999999876532211111 11112345889999999998888999999999 88889999998888753
Q ss_pred cccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 763 MEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
...... ....... .....+..++..+.+++.+||+.||++||++.|+++
T Consensus 215 ~~~~~~--~~~~~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 215 CTQLQA--IFKIGEN------ASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred ccHHHH--HHHHhcc------CCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 221110 0000000 001112335677889999999999999999999976
No 218
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=6.3e-34 Score=297.21 Aligned_cols=257 Identities=21% Similarity=0.280 Sum_probs=198.4
Q ss_pred HHHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCc
Q 040925 527 SKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTD 606 (833)
Q Consensus 527 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 606 (833)
+.+++.+.....||+|+||.||+|++..++..||+|.+........+.+.+|+.++++++|+||+++++++...+
T Consensus 4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----- 78 (268)
T cd06624 4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENG----- 78 (268)
T ss_pred ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCC-----
Confidence 345556666789999999999999998899999999987655555678999999999999999999999976554
Q ss_pred eEeEEEEecCCCChhhhhccCCCccccccC--CHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecC-CCcEEE
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQVEVCKL--SLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDH-DMVAHV 683 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l--~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kL 683 (833)
..++||||+++++|.+++..... .+ ++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l 150 (268)
T cd06624 79 FFKIFMEQVPGGSLSALLRSKWG-----PLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKI 150 (268)
T ss_pred EEEEEEecCCCCCHHHHHHHhcc-----cCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEE
Confidence 89999999999999999976421 34 7888899999999999999999 9999999999999976 679999
Q ss_pred cccccccccCcccccccccCCCccccccccccccCccccCCCC--CCcccccccCCcCCCccccCCccHHHHHHHhCCCc
Q 040925 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSE--ASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEK 761 (833)
Q Consensus 684 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~ 761 (833)
+|||.+........ ......|++.|+|||++.+.. ++.++|||| +|+++++++++..|+.
T Consensus 151 ~dfg~~~~~~~~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~s----------lGvvl~~l~~g~~p~~ 212 (268)
T cd06624 151 SDFGTSKRLAGINP--------CTETFTGTLQYMAPEVIDKGPRGYGAPADIWS----------LGCTIVEMATGKPPFI 212 (268)
T ss_pred ecchhheecccCCC--------ccccCCCCccccChhhhccccccCCchhhhHH----------HHHHHHHHHhCCCCCc
Confidence 99999876533211 111235899999999876543 788999999 7888888888887764
Q ss_pred ccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 762 VMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 762 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
................ .....+..+.+.+.+++.+||..+|++|||+.|+++.
T Consensus 213 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 213 ELGEPQAAMFKVGMFK------IHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred cccChhhhHhhhhhhc------cCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 2211111110000000 0011123356678899999999999999999999863
No 219
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=4.2e-34 Score=302.38 Aligned_cols=270 Identities=21% Similarity=0.256 Sum_probs=206.9
Q ss_pred cchHHHHHHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhc-CCCccceEeeEeec
Q 040925 521 VSYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNI-RHRNLIKIITICSS 599 (833)
Q Consensus 521 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 599 (833)
+.+.++..+.++|++.+.||+|+||.||+|....+++.||+|++.... .....+.+|+.+++++ +|||++++++++..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 455667777899999999999999999999999899999999986432 2345678899999999 79999999999876
Q ss_pred CCCCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCC
Q 040925 600 TDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM 679 (833)
Q Consensus 600 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~ 679 (833)
.+.......++||||+++|+|.++++..... ...+++..++.++.|++.||.|||+. +++||||||+||+++.++
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~ 165 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLIC--GQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEG 165 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCC
Confidence 5433345789999999999999988643211 11689999999999999999999999 999999999999999999
Q ss_pred cEEEcccccccccCcccccccccCCCccccccccccccCccccCCC-----CCCcccccccCCcCCCccccCCccHHHHH
Q 040925 680 VAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS-----EASMTGDIFTGRRPIDAVFNEGHSLHEFA 754 (833)
Q Consensus 680 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~Di~s~~~~~~~~~~~g~~l~~~~ 754 (833)
.+||+|||++......... .....|+..|+|||++... .++.++|||| +|++++++.
T Consensus 166 ~~kl~dfg~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~s----------lGvi~~el~ 227 (291)
T cd06639 166 GVKLVDFGVSAQLTSTRLR--------RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWS----------LGITAIELG 227 (291)
T ss_pred CEEEeecccchhccccccc--------ccCccCCccccChhhhcCCCCcccccCCccchHH----------HHHHHHHHh
Confidence 9999999998865432211 1124589999999987543 3688999999 788888999
Q ss_pred HHhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 755 KTALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 755 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
++..|+........ ......... ......++....+.+++.+||..||++||++.|+++.
T Consensus 228 ~g~~p~~~~~~~~~--~~~~~~~~~----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 228 DGDPPLFDMHPVKT--LFKIPRNPP----PTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred hCCCCCCCCcHHHH--HHHHhcCCC----CCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 88887653221111 011100000 0001122345678999999999999999999999864
No 220
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=7.2e-34 Score=297.13 Aligned_cols=258 Identities=21% Similarity=0.323 Sum_probs=199.9
Q ss_pred cCCccCceeccCcceEEEEEEECCC---ceEEEEEEeeccC-CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCc
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGED---EMIVAVKVINLKY-KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTD 606 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 606 (833)
.+|.+.+.||+|+||.||+|.+... ...||+|...... ....+.+.+|+.++++++||||+++++++...
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------ 79 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITEN------ 79 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCC------
Confidence 4688899999999999999987543 4568999886543 23456789999999999999999999987532
Q ss_pred eEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccc
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDF 686 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 686 (833)
..++||||+++|+|.+++..... .+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+||
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~ 151 (270)
T cd05056 80 PVWIVMELAPLGELRSYLQVNKY-----SLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDF 151 (270)
T ss_pred CcEEEEEcCCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccC
Confidence 46899999999999999976432 589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCccccc
Q 040925 687 GLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEI 765 (833)
Q Consensus 687 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~ 765 (833)
|+++.......... ....+++.|+|||.+....++.++|||| +|+.++++++ +..|+.....
T Consensus 152 g~~~~~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~Di~s----------lG~il~el~~~g~~pf~~~~~ 214 (270)
T cd05056 152 GLSRYLEDESYYKA-------SKGKLPIKWMAPESINFRRFTSASDVWM----------FGVCMWEILMLGVKPFQGVKN 214 (270)
T ss_pred ceeeecccccceec-------CCCCccccccChhhhccCCCCchhhhHH----------HHHHHHHHHHcCCCCCCCCCH
Confidence 99986644321110 1123567899999988888999999999 7777788765 6666542211
Q ss_pred ccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhhh
Q 040925 766 VDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRET 827 (833)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~~ 827 (833)
. ........... ...+..++..+.+++.+||..+|++|||+.++++.|.++...
T Consensus 215 ~--~~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 215 N--DVIGRIENGER------LPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred H--HHHHHHHcCCc------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 1 11111111100 011234567889999999999999999999999999987653
No 221
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.7e-34 Score=298.12 Aligned_cols=246 Identities=22% Similarity=0.272 Sum_probs=191.3
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeecc--CCcchhHHHHHHHHHhhcC-CCccceEeeEeecCCCCCCc
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK--YKGASRSFVAECEALRNIR-HRNLIKIITICSSTDFKGTD 606 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 606 (833)
...|++.++||+||.+.||++... +.+.||+|++... +....+.+.+|+..|.+++ |.+||++++|-.. .+
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~-----d~ 433 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVT-----DG 433 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeecc-----Cc
Confidence 346999999999999999999886 4556677766432 3344578999999999996 9999999999544 44
Q ss_pred eEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccc
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDF 686 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 686 (833)
+.||||||-+ .+|..++++... ..+...++.+..|++.|+.++|.+ ||||.||||+|+++ ..|.+||+||
T Consensus 434 ~lYmvmE~Gd-~DL~kiL~k~~~-----~~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLl-VkG~LKLIDF 503 (677)
T KOG0596|consen 434 YLYMVMECGD-IDLNKILKKKKS-----IDPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLL-VKGRLKLIDF 503 (677)
T ss_pred eEEEEeeccc-ccHHHHHHhccC-----CCchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEE-EeeeEEeeee
Confidence 9999999985 599999988653 233338889999999999999999 99999999999998 5789999999
Q ss_pred ccccccCcccccccccCCCccccccccccccCccccCCCC-----------CCcccccccCCcCCCccccCCccHHHHHH
Q 040925 687 GLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSE-----------ASMTGDIFTGRRPIDAVFNEGHSLHEFAK 755 (833)
Q Consensus 687 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----------~~~~~Di~s~~~~~~~~~~~g~~l~~~~~ 755 (833)
|+|..+..+... ......+||+.|||||.+.... .+.++|||| .|+++|+|+.
T Consensus 504 GIA~aI~~DTTs------I~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWS----------LGCILYqMvY 567 (677)
T KOG0596|consen 504 GIANAIQPDTTS------IVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWS----------LGCILYQMVY 567 (677)
T ss_pred chhcccCccccc------eeeccccCcccccCHHHHhhccccccCCCcceeecCccchhh----------hhhHHHHHHh
Confidence 999988775432 2334578999999999765432 568889998 8888999999
Q ss_pred HhCCCcccc--------cccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 756 TALPEKVME--------IVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 756 ~~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
+..|+.... +.+|....++... .. ..++.++|..||.+||++|||+.|+++.
T Consensus 568 gktPf~~~~n~~aKl~aI~~P~~~Iefp~~---------~~----~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 568 GKTPFGQIINQIAKLHAITDPNHEIEFPDI---------PE----NDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred cCCchHHHHHHHHHHHhhcCCCccccccCC---------CC----chHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 988876222 2233221111110 01 1238899999999999999999999875
No 222
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=7.3e-34 Score=295.76 Aligned_cols=256 Identities=24% Similarity=0.428 Sum_probs=191.4
Q ss_pred ceeccCcceEEEEEEECC---CceEEEEEEeeccC-CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEE
Q 040925 537 NMIGQGSFGYVYKGTLGE---DEMIVAVKVINLKY-KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVF 612 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 612 (833)
+.||+|+||.||+|.+.. .+..||+|.+.... ....+.+.+|+.+++.++||||+++++++...+ ...++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSE----GSPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCC----CCcEEEE
Confidence 468999999999998643 35679999985332 233567889999999999999999999875332 3578999
Q ss_pred EecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccccc
Q 040925 613 EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL 692 (833)
Q Consensus 613 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 692 (833)
||+++|+|.+++..... ..++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++..
T Consensus 77 e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~ 148 (262)
T cd05058 77 PYMKHGDLRNFIRSETH-----NPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDI 148 (262)
T ss_pred ecCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccc
Confidence 99999999999976432 467788899999999999999999 9999999999999999999999999999765
Q ss_pred CcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCC-Ccccccccccch
Q 040925 693 SDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALP-EKVMEIVDPSLL 771 (833)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p-~~~~~~~~~~~~ 771 (833)
....... ........+++.|+|||++.+..++.++|||| +|+++++++++..| +...... ...
T Consensus 149 ~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s----------lG~~l~el~~~~~~~~~~~~~~--~~~ 212 (262)
T cd05058 149 YDKEYYS----VHNHTGAKLPVKWMALESLQTQKFTTKSDVWS----------FGVLLWELMTRGAPPYPDVDSF--DIT 212 (262)
T ss_pred cCCccee----ecccccCcCCccccChhHhccCccchHHHHHH----------HHHHHHHHHcCCCCCCCCCCHH--HHH
Confidence 4322110 01111234678899999998888999999999 77777777775433 3211111 111
Q ss_pred hhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhh
Q 040925 772 MEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRE 826 (833)
Q Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~ 826 (833)
....... ....+..+++.+.+++.+||..+|++||++.|+++.++++..
T Consensus 213 ~~~~~~~------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 213 VYLLQGR------RLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred HHHhcCC------CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 1111100 011112345678899999999999999999999999998754
No 223
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=3.7e-34 Score=301.04 Aligned_cols=254 Identities=20% Similarity=0.339 Sum_probs=201.3
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
.++|++.+.||.|++|.||+|.+..++..||+|.++.......+.+.+|++++++++||||+++++++.... ..+
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 78 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYEN-----KLW 78 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCC-----eEE
Confidence 457999999999999999999998889999999997655555567889999999999999999999976544 889
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||+++++|.+++..... .+++..++.++.|++.||.|||+. +|+|+||||+||+++.++.++|+|||.+
T Consensus 79 lv~e~~~~~~L~~~~~~~~~-----~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~ 150 (280)
T cd06611 79 ILIEFCDGGALDSIMLELER-----GLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVS 150 (280)
T ss_pred EEeeccCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccc
Confidence 99999999999999876432 589999999999999999999999 9999999999999999999999999988
Q ss_pred cccCcccccccccCCCccccccccccccCccccC-----CCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGM-----GSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVME 764 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~ 764 (833)
........ ......||+.|+|||++. +..++.++|||| +|++++++.++..|+...+
T Consensus 151 ~~~~~~~~--------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~s----------lG~il~~l~~g~~p~~~~~ 212 (280)
T cd06611 151 AKNKSTLQ--------KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWS----------LGITLIELAQMEPPHHELN 212 (280)
T ss_pred hhhccccc--------ccceeecchhhcCHHHHhhcccCCCCCCccccHHH----------HHHHHHHHHhCCCCcccCC
Confidence 75433211 112346899999999864 345778999999 7888889999988875322
Q ss_pred cccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 765 IVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
... .......... .....+..++..+.+++.+||+.||++||+++++++.
T Consensus 213 ~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 213 PMR--VLLKILKSEP----PTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred HHH--HHHHHhcCCC----CCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 111 1111111000 0001122345678899999999999999999999875
No 224
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.9e-34 Score=300.67 Aligned_cols=257 Identities=21% Similarity=0.339 Sum_probs=202.2
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
++|++.+.||+|++|+||+|.+..+++.||+|++..... ...+.+.+|+++++.++||||+++++++.... ..+
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 79 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNEN-----NIC 79 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCC-----EEE
Confidence 578899999999999999999998899999999865432 33567899999999999999999999976554 899
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||+++|+|.+++...+ .+++..+..++.|++.||.|||+.. +++||||||+||+++.++.++|+|||++
T Consensus 80 lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~ 151 (284)
T cd06620 80 MCMEFMDCGSLDRIYKKGG------PIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVS 151 (284)
T ss_pred EEEecCCCCCHHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcc
Confidence 9999999999999987644 6899999999999999999999732 8999999999999999999999999998
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccc-c-
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIV-D- 767 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~-~- 767 (833)
....... .....|+..|+|||++.+..++.++|||| +|+++++++++..|+...... +
T Consensus 152 ~~~~~~~----------~~~~~~~~~~~aPE~~~~~~~~~~~Di~s----------lG~~l~~l~tg~~p~~~~~~~~~~ 211 (284)
T cd06620 152 GELINSI----------ADTFVGTSTYMSPERIQGGKYTVKSDVWS----------LGISIIELALGKFPFAFSNIDDDG 211 (284)
T ss_pred cchhhhc----------cCccccCcccCCHHHHccCCCCccchHHH----------HHHHHHHHHhCCCCCcccchhhhh
Confidence 6543211 11246899999999998888999999999 788899999988887532210 0
Q ss_pred ---ccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 040925 768 ---PSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKL 821 (833)
Q Consensus 768 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 821 (833)
+....+.... ............+++..+.+++.+||..||++|||++|+++..
T Consensus 212 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 212 QDDPMGILDLLQQ-IVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred hhhhhHHHHHHHH-HhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 0000000000 0000011112233667889999999999999999999999863
No 225
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=6.3e-34 Score=299.31 Aligned_cols=268 Identities=22% Similarity=0.316 Sum_probs=204.8
Q ss_pred HhcCCccCceeccCcceEEEEEEECC----CceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCC
Q 040925 529 ATGEFSSSNMIGQGSFGYVYKGTLGE----DEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFK 603 (833)
Q Consensus 529 ~~~~y~~~~~lg~G~~g~Vy~~~~~~----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 603 (833)
..++|++.+.||+|+||.||+|.+.. ++..||+|+++.... ...+.+.+|+.++++++||||+++++++...
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~--- 80 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIED--- 80 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC---
Confidence 34679999999999999999999875 368899999864322 2346688999999999999999999987543
Q ss_pred CCceEeEEEEecCCCChhhhhccCCCc--cccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcE
Q 040925 604 GTDFKAFVFEYMENGSLKDWLHQSDDQ--VEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVA 681 (833)
Q Consensus 604 ~~~~~~lv~e~~~~gsL~~~l~~~~~~--~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 681 (833)
....++++||+++|+|.+++...... .....+++.+++.++.|++.||+|||+. +++||||||+||++++++.+
T Consensus 81 -~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~ 156 (280)
T cd05043 81 -GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQV 156 (280)
T ss_pred -CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcE
Confidence 24678999999999999998764321 0112689999999999999999999999 99999999999999999999
Q ss_pred EEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCC
Q 040925 682 HVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPE 760 (833)
Q Consensus 682 kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~ 760 (833)
||+|||+++.+........ .....++..|+|||++.+..++.++|||| +|++++++++ +..|+
T Consensus 157 kl~d~g~~~~~~~~~~~~~------~~~~~~~~~y~apE~~~~~~~~~~~Di~s----------lG~~l~el~~~g~~p~ 220 (280)
T cd05043 157 KITDNALSRDLFPMDYHCL------GDNENRPVKWMALESLVNKEYSSASDVWS----------FGVLLWELMTLGQTPY 220 (280)
T ss_pred EECCCCCcccccCCceEEe------CCCCCcchhccCHHHHhcCCCCchhhHHH----------hHHHHHHHhcCCCCCc
Confidence 9999999986543221100 01124677899999998888999999999 7777888877 66665
Q ss_pred cccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhhh
Q 040925 761 KVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRET 827 (833)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~~ 827 (833)
...... ........... ......+++.+.+++.+||..||++|||+.++++.|+.+.+.
T Consensus 221 ~~~~~~---~~~~~~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 221 VEIDPF---EMAAYLKDGYR-----LAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred CcCCHH---HHHHHHHcCCC-----CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 422111 11111111110 001123456789999999999999999999999999988754
No 226
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.2e-33 Score=303.67 Aligned_cols=256 Identities=21% Similarity=0.242 Sum_probs=192.7
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeecc---CCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK---YKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
++|++.+.||+|+||.||+|+...+++.||+|+++.. .....+.+.+|+.+++.++|+||+++++++...+ .
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-----~ 75 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDEN-----N 75 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCC-----e
Confidence 4799999999999999999999999999999999642 1223456888999999999999999999876554 8
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.|+||||+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg 147 (331)
T cd05597 76 LYLVMDYYVGGDLLTLLSKFED-----RLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFG 147 (331)
T ss_pred EEEEEecCCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECC
Confidence 9999999999999999975332 588999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCC-----CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-----SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKV 762 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~ 762 (833)
++......... ......||+.|||||++.+ ..++.++|||| .|+++++++++..|+..
T Consensus 148 ~~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Diws----------lG~~l~el~~g~~Pf~~ 210 (331)
T cd05597 148 SCLRLLADGTV-------QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWS----------LGVCMYEMLYGETPFYA 210 (331)
T ss_pred ceeecCCCCCc-------cccceeccccccCHHHHhhccccccCCCCcceeeh----------hhhHHHHHhhCCCCCCC
Confidence 98765432210 1112359999999999863 45788999999 78888999998888753
Q ss_pred cccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCC--CCCCCHHHHHHH
Q 040925 763 MEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESP--FERMDMRDVVAK 820 (833)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP--~~RPt~~eil~~ 820 (833)
....+. ............ .......++..+.+++.+|+..++ ..||+++++++.
T Consensus 211 ~~~~~~--~~~i~~~~~~~~--~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 211 ESLVET--YGKIMNHKEHFQ--FPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred CCHHHH--HHHHHcCCCccc--CCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 221110 000110000000 000111245567778887775433 348899999876
No 227
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.9e-34 Score=314.43 Aligned_cols=187 Identities=25% Similarity=0.305 Sum_probs=157.6
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
..+|.+.+.||+|+||.||+|.+..+++.||||... ...+.+|++++++++|||||++++++...+ ..+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~-----~~~ 236 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGG-----LTC 236 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECC-----EEE
Confidence 457999999999999999999999999999999642 234678999999999999999999976554 789
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+|||++. ++|.+++..... .+++.+++.|+.|++.||.|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 237 lv~e~~~-~~L~~~l~~~~~-----~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla 307 (461)
T PHA03211 237 LVLPKYR-SDLYTYLGARLR-----PLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAA 307 (461)
T ss_pred EEEEccC-CCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCc
Confidence 9999995 699998865432 689999999999999999999999 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDA 742 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~ 742 (833)
+....... ........||+.|+|||++.+..++.++||||.|+.+++
T Consensus 308 ~~~~~~~~------~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~E 354 (461)
T PHA03211 308 CFARGSWS------TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFE 354 (461)
T ss_pred eecccccc------cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHH
Confidence 86543211 111123569999999999999999999999994444443
No 228
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=8.1e-34 Score=298.80 Aligned_cols=266 Identities=21% Similarity=0.311 Sum_probs=206.1
Q ss_pred cchHHHHHHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhc-CCCccceEeeEeec
Q 040925 521 VSYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNI-RHRNLIKIITICSS 599 (833)
Q Consensus 521 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 599 (833)
.+..++....+.|++.+.||.|+||.||+|.+..+++.||+|++.... .....+..|+.+++++ +||||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 355666677889999999999999999999999899999999986432 2345688899999999 69999999998754
Q ss_pred CCC-CCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCC
Q 040925 600 TDF-KGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHD 678 (833)
Q Consensus 600 ~~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~ 678 (833)
... ......+++|||+++|+|.+++...... .+++..++.++.|++.|++|||+. +|+||||||+||+++++
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~----~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~ 157 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGN----ALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTEN 157 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHccCC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCC
Confidence 321 2245789999999999999999764422 578888999999999999999999 99999999999999999
Q ss_pred CcEEEcccccccccCcccccccccCCCccccccccccccCccccC-----CCCCCcccccccCCcCCCccccCCccHHHH
Q 040925 679 MVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGM-----GSEASMTGDIFTGRRPIDAVFNEGHSLHEF 753 (833)
Q Consensus 679 ~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~ 753 (833)
+.++|+|||++........ ......|++.|+|||++. +..++.++|||| +|++++++
T Consensus 158 ~~~~l~dfg~~~~~~~~~~--------~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~Dvws----------lG~~l~el 219 (282)
T cd06636 158 AEVKLVDFGVSAQLDRTVG--------RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWS----------LGITAIEM 219 (282)
T ss_pred CCEEEeeCcchhhhhcccc--------CCCcccccccccCHhhcCcccCcCcCCCcccchhH----------HHHHHHHH
Confidence 9999999999875532111 112346899999999875 356888999999 88889999
Q ss_pred HHHhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 754 AKTALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 754 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
+++..|+.......... . ... ..........++..+.+++.+||..||.+|||+.|+++
T Consensus 220 ~~g~~p~~~~~~~~~~~--~-~~~----~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 220 AEGAPPLCDMHPMRALF--L-IPR----NPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred HhCCCCccccCHHhhhh--h-Hhh----CCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 99988874221110000 0 000 00111122345678999999999999999999999975
No 229
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1e-33 Score=308.90 Aligned_cols=261 Identities=18% Similarity=0.229 Sum_probs=196.1
Q ss_pred HhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC--CcchhHHHHHHHHHhhcCCCccceEeeEeecCC-CCCC
Q 040925 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVAECEALRNIRHRNLIKIITICSSTD-FKGT 605 (833)
Q Consensus 529 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~ 605 (833)
..++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|+.+++.++||||+++++++.... +...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 4578999999999999999999999899999999996432 233467889999999999999999999875432 2233
Q ss_pred ceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcc
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 685 (833)
...|+||||+++ ++.+++.. .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~D 169 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 169 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHh--------cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEe
Confidence 468999999975 78877743 478889999999999999999999 999999999999999999999999
Q ss_pred cccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccc
Q 040925 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEI 765 (833)
Q Consensus 686 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~ 765 (833)
||+++...... ......||+.|+|||++.+..++.++|||| +|+++++++++..|+...+.
T Consensus 170 fG~a~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwS----------lG~il~ell~g~~pf~~~~~ 230 (364)
T cd07875 170 FGLARTAGTSF---------MMTPYVVTRYYRAPEVILGMGYKENVDIWS----------VGCIMGEMIKGGVLFPGTDH 230 (364)
T ss_pred CCCccccCCCC---------cccCCcccCCcCCHHHHhCCCCCchhhHHh----------HHHHHHHHHhCCCCCCCCCH
Confidence 99998653321 112346899999999999999999999999 67777788777776642211
Q ss_pred ccc-------------cchhh-------hccccch-------------hhhhhhhchHHHHHHHHHHhhccCCCCCCCCC
Q 040925 766 VDP-------------SLLME-------VMTNNSM-------------IQEDKRVKTEECLNAIIRTGVLCSMESPFERM 812 (833)
Q Consensus 766 ~~~-------------~~~~~-------~~~~~~~-------------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 812 (833)
.+. ..... ....... ..+............+.+++.+|++.||++||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~ 310 (364)
T cd07875 231 IDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310 (364)
T ss_pred HHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCC
Confidence 100 00000 0000000 00000000111234678999999999999999
Q ss_pred CHHHHHHH
Q 040925 813 DMRDVVAK 820 (833)
Q Consensus 813 t~~eil~~ 820 (833)
|++|+++.
T Consensus 311 t~~e~L~h 318 (364)
T cd07875 311 SVDEALQH 318 (364)
T ss_pred CHHHHhcC
Confidence 99999875
No 230
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1e-33 Score=293.53 Aligned_cols=250 Identities=23% Similarity=0.316 Sum_probs=201.5
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeE
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAF 610 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 610 (833)
++|++.+.||+|++|.||+|....+++.||+|.++.... .+.+.+|++++++++||||+++++++.... ..|+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~-----~~~l 75 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNT-----DLWI 75 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCC-----cEEE
Confidence 579999999999999999999998899999999864422 678999999999999999999999976554 8999
Q ss_pred EEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccc
Q 040925 611 VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690 (833)
Q Consensus 611 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 690 (833)
+|||+++++|.+++..... .+++..++.++.|++.|+.|||+. +++||||+|+||+++.++.+||+|||++.
T Consensus 76 ~~e~~~~~~L~~~l~~~~~-----~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~ 147 (256)
T cd06612 76 VMEYCGAGSVSDIMKITNK-----TLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSG 147 (256)
T ss_pred EEecCCCCcHHHHHHhCcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccch
Confidence 9999999999999875432 689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccc
Q 040925 691 FLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSL 770 (833)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~ 770 (833)
....... ......|+..|+|||++.+..++.++|||| +|+++++++++..|+..........
T Consensus 148 ~~~~~~~--------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s----------~G~il~~l~~g~~p~~~~~~~~~~~ 209 (256)
T cd06612 148 QLTDTMA--------KRNTVIGTPFWMAPEVIQEIGYNNKADIWS----------LGITAIEMAEGKPPYSDIHPMRAIF 209 (256)
T ss_pred hcccCcc--------ccccccCCccccCHHHHhcCCCCchhhHHH----------HHHHHHHHHhCCCCCCCcchhhhhh
Confidence 7654321 111235889999999999889999999999 7888899998888765322111110
Q ss_pred hhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 771 LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
...... ......+..+...+.+++.+||+.||++|||+.|+++
T Consensus 210 ---~~~~~~---~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 210 ---MIPNKP---PPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred ---hhccCC---CCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 000000 0001112335567899999999999999999999986
No 231
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.4e-33 Score=296.40 Aligned_cols=259 Identities=22% Similarity=0.355 Sum_probs=200.5
Q ss_pred cCCccCceeccCcceEEEEEEECCCce----EEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCC
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEM----IVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGT 605 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 605 (833)
++|++.+.||+|+||.||+|.+..+++ .||+|.++.... .....+.+|+.++++++||||+++++++..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 80 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS------ 80 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec------
Confidence 578899999999999999999865554 689998864432 234678899999999999999999999864
Q ss_pred ceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcc
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 685 (833)
...++||||+++|+|.+++..... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|
T Consensus 81 ~~~~~v~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~d 152 (279)
T cd05057 81 SQVQLITQLMPLGCLLDYVRNHKD-----NIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITD 152 (279)
T ss_pred CceEEEEecCCCCcHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECC
Confidence 368999999999999999976542 589999999999999999999998 999999999999999999999999
Q ss_pred cccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCcccc
Q 040925 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVME 764 (833)
Q Consensus 686 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~ 764 (833)
||.++......... ......++..|+|||......++.++|||| +|+.++++++ +..|+....
T Consensus 153 fg~~~~~~~~~~~~------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s----------lG~~l~el~~~g~~p~~~~~ 216 (279)
T cd05057 153 FGLAKLLDVDEKEY------HAEGGKVPIKWMALESILHRIYTHKSDVWS----------YGVTVWELMTFGAKPYEGIP 216 (279)
T ss_pred CcccccccCcccce------ecCCCcccccccCHHHhhcCCcCchhhHHH----------HHHHHHHHhcCCCCCCCCCC
Confidence 99998765322111 011122467899999998888999999999 7777888776 666654221
Q ss_pred cccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhhh
Q 040925 765 IVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRET 827 (833)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~~ 827 (833)
. ............ ...+..+...+.+++.+||..||++|||+.++++.+.++..+
T Consensus 217 ~--~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 217 A--VEIPDLLEKGER------LPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred H--HHHHHHHhCCCC------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 1 111111111100 011112345678999999999999999999999999998654
No 232
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=5e-34 Score=298.42 Aligned_cols=240 Identities=22% Similarity=0.349 Sum_probs=180.7
Q ss_pred eeccCcceEEEEEEECC------------------------CceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceE
Q 040925 538 MIGQGSFGYVYKGTLGE------------------------DEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKI 593 (833)
Q Consensus 538 ~lg~G~~g~Vy~~~~~~------------------------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 593 (833)
.||+|+||.||+|.... ....||+|+++.........+.+|+.++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 68999999999997531 124689999865444445678899999999999999999
Q ss_pred eeEeecCCCCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCe
Q 040925 594 ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNV 673 (833)
Q Consensus 594 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NI 673 (833)
++++.... ..++||||+++|+|.+++..... .+++..+..++.|+++||+|||+. +|+||||||+||
T Consensus 82 ~~~~~~~~-----~~~lv~ey~~~g~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Ni 148 (274)
T cd05076 82 HGVCVRGS-----ENIMVEEFVEHGPLDVCLRKEKG-----RVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNI 148 (274)
T ss_pred EEEEEeCC-----ceEEEEecCCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccE
Confidence 99987655 78999999999999999865332 588999999999999999999999 999999999999
Q ss_pred eecCCC-------cEEEcccccccccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCcccc
Q 040925 674 LLDHDM-------VAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFN 745 (833)
Q Consensus 674 ll~~~~-------~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~ 745 (833)
++++++ .+|++|||.+....... ...++..|+|||++.+ ..++.++||||
T Consensus 149 ll~~~~~~~~~~~~~kl~d~g~~~~~~~~~------------~~~~~~~~~aPe~~~~~~~~~~~~Dv~s---------- 206 (274)
T cd05076 149 LLARLGLAEGTSPFIKLSDPGVSFTALSRE------------ERVERIPWIAPECVPGGNSLSTAADKWS---------- 206 (274)
T ss_pred EEeccCcccCccceeeecCCcccccccccc------------ccccCCcccCchhhcCCCCCCcHHHHHH----------
Confidence 997644 48999999886432211 1247888999998865 56899999999
Q ss_pred CCccHHHHH-HHhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 040925 746 EGHSLHEFA-KTALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLC 822 (833)
Q Consensus 746 ~g~~l~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 822 (833)
+|++++++. .+..|+.... +........... ..+......+.+++.+||+.+|++|||+++|++.|+
T Consensus 207 lG~~l~el~~~g~~p~~~~~---~~~~~~~~~~~~-------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 207 FGTTLLEICFDGEVPLKERT---PSEKERFYEKKH-------RLPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred HHHHHHHHHhCCCCCccccC---hHHHHHHHHhcc-------CCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 666777763 4555543211 111011111100 001112346889999999999999999999998873
No 233
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.3e-33 Score=292.92 Aligned_cols=252 Identities=21% Similarity=0.307 Sum_probs=199.2
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccC--CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
+|++.+.||+|++|.||+|.+..+++.||+|.+.... ....+.+.+|++++++++|||++++++.+... ....+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~~ 76 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGE----DGLLY 76 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCC----CCEEE
Confidence 5889999999999999999999889999999986432 23345788999999999999999999875322 23689
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||+++++|.+++...... .+++.+++.++.|++.|++|||+. +++||||||+||+++.++.++|+|||++
T Consensus 77 lv~e~~~~~~l~~~l~~~~~~----~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~ 149 (257)
T cd08223 77 IVMGFCEGGDLYHKLKEQKGK----LLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIA 149 (257)
T ss_pred EEecccCCCcHHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccce
Confidence 999999999999999764322 589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPS 769 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~ 769 (833)
........ ......|++.|+|||+..+..++.++|||| .|+++++++++..|+...+.. .
T Consensus 150 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s----------lG~il~~l~~g~~~~~~~~~~--~ 209 (257)
T cd08223 150 RVLENQCD--------MASTLIGTPYYMSPELFSNKPYNYKSDVWA----------LGCCVYEMATLKHAFNAKDMN--S 209 (257)
T ss_pred EEecccCC--------ccccccCCcCccChhHhcCCCCCchhhhHH----------HHHHHHHHHcCCCCCCCCCHH--H
Confidence 76543211 112345899999999999989999999999 788888888887776422211 1
Q ss_pred chhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 770 LLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.......... ...+...++.+.+++.+||+.||++|||+.+++++
T Consensus 210 ~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 210 LVYRIIEGKL------PPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred HHHHHHhcCC------CCCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 1111111110 01123456778999999999999999999999864
No 234
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.3e-33 Score=297.62 Aligned_cols=263 Identities=22% Similarity=0.357 Sum_probs=197.6
Q ss_pred cCCccCceeccCcceEEEEEEECC----CceEEEEEEeeccCCc-chhHHHHHHHHHhhcCCCccceEeeEeecCCCCCC
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGE----DEMIVAVKVINLKYKG-ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGT 605 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 605 (833)
.+|++.+.||+|+||.||+|++.. +++.||||+++..... ..+.+.+|++++++++||||+++++++.... .
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~---~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPG---G 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCC---C
Confidence 468888999999999999998643 4789999999755443 4568999999999999999999999875432 4
Q ss_pred ceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcc
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 685 (833)
...++||||+++++|.+++..... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~~-----~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~d 152 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHRD-----QINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISD 152 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCcc-----ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcc
Confidence 478999999999999999976542 589999999999999999999999 999999999999999999999999
Q ss_pred cccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccc
Q 040925 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEI 765 (833)
Q Consensus 686 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~ 765 (833)
||.+............ .....++..|+|||...+..++.++||||.|+.++ +++++..|+.....
T Consensus 153 fg~~~~~~~~~~~~~~-----~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~----------el~tg~~p~~~~~~ 217 (284)
T cd05038 153 FGLAKVLPEDKDYYYV-----KEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLY----------ELFTYGDPSQSPPA 217 (284)
T ss_pred cccccccccCCcceec-----cCCCCCcccccCcHHHccCCCCcccchHHHhhhhh----------eeeccCCCcccccc
Confidence 9999876532211100 11123566799999998888999999999555544 44444444321100
Q ss_pred cccc---------ch---hhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 040925 766 VDPS---------LL---MEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHT 824 (833)
Q Consensus 766 ~~~~---------~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i 824 (833)
.... .. .+..... .....+..++.++.+++.+||..+|++|||+.||+++|+.+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 218 EFLRMIGIAQGQMIVTRLLELLKEG-----ERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred hhccccccccccccHHHHHHHHHcC-----CcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 0000 00 0000000 01111233557899999999999999999999999999876
No 235
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=2.1e-33 Score=294.65 Aligned_cols=249 Identities=25% Similarity=0.340 Sum_probs=201.9
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC-CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY-KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
..|+..+.||+|+||.||+|.+..++..||+|.++... ......+.+|+.++++++||||+++++++.... ..+
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 78 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGT-----KLW 78 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC-----EEE
Confidence 45888899999999999999998889999999987443 234567889999999999999999999976554 899
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||+++|+|.+++... ++++.++..++.|++.|++|+|+. +++|+||+|+||+++.++.++|+|||++
T Consensus 79 lv~e~~~~~~L~~~i~~~-------~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~ 148 (277)
T cd06640 79 IIMEYLGGGSALDLLRAG-------PFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVA 148 (277)
T ss_pred EEEecCCCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccc
Confidence 999999999999998653 578899999999999999999999 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPS 769 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~ 769 (833)
........ ......++..|+|||++.+..++.++|+|| +|++++++.++..|+........
T Consensus 149 ~~~~~~~~--------~~~~~~~~~~y~apE~~~~~~~~~~~Dv~s----------lG~il~el~tg~~p~~~~~~~~~- 209 (277)
T cd06640 149 GQLTDTQI--------KRNTFVGTPFWMAPEVIQQSAYDSKADIWS----------LGITAIELAKGEPPNSDMHPMRV- 209 (277)
T ss_pred eeccCCcc--------ccccccCcccccCHhHhccCCCccHHHHHH----------HHHHHHHHHHCCCCCCCcChHhH-
Confidence 76543221 111245888999999998888999999999 88889999999888653221110
Q ss_pred chhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 770 LLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
....... ........++..+.+++.+||+.+|++||+++++++.
T Consensus 210 --~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 210 --LFLIPKN-----NPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred --hhhhhcC-----CCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 0000000 0112234567789999999999999999999999776
No 236
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7e-34 Score=308.62 Aligned_cols=188 Identities=22% Similarity=0.304 Sum_probs=157.5
Q ss_pred HHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 528 KATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 528 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
....+|++.+.||+|+||.||+|++..+++.||+|+... .....|+.++++++||||+++++++.... .
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~ 131 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK------GTTLIEAMLLQNVNHPSVIRMKDTLVSGA-----I 131 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc------cccHHHHHHHHhCCCCCCcChhheEEeCC-----e
Confidence 344579999999999999999999998999999998532 22356999999999999999999976554 7
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.++||||+. |+|.+++..... .+++..++.|+.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 132 ~~lv~e~~~-~~l~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG 202 (357)
T PHA03209 132 TCMVLPHYS-SDLYTYLTKRSR-----PLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLG 202 (357)
T ss_pred eEEEEEccC-CcHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCc
Confidence 899999995 689988865432 689999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVF 744 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~ 744 (833)
+++...... ......||+.|+|||++.+..++.++||||.|+.++++.
T Consensus 203 ~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell 250 (357)
T PHA03209 203 AAQFPVVAP---------AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEML 250 (357)
T ss_pred cccccccCc---------ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHH
Confidence 997532211 112346999999999999999999999999555544443
No 237
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=5.3e-34 Score=306.94 Aligned_cols=241 Identities=23% Similarity=0.259 Sum_probs=179.5
Q ss_pred eccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhc---CCCccceEeeEeecCCCCCCceEeEEE
Q 040925 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNI---RHRNLIKIITICSSTDFKGTDFKAFVF 612 (833)
Q Consensus 539 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~~~~~~lv~ 612 (833)
||+|+||+||+|++..+++.||||++.... .........|..++... +||+|+++++++.... ..|+||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~-----~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDS-----DLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCC-----eEEEEE
Confidence 699999999999999999999999986432 11223455677777665 6999999999866554 899999
Q ss_pred EecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccccc
Q 040925 613 EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL 692 (833)
Q Consensus 613 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 692 (833)
||+++|+|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~g~L~~~l~~~~------~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~ 146 (330)
T cd05586 76 DYMSGGELFWHLQKEG------RFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKAN 146 (330)
T ss_pred cCCCCChHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCC
Confidence 9999999999987654 689999999999999999999999 9999999999999999999999999998753
Q ss_pred CcccccccccCCCccccccccccccCccccCCC-CCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccch
Q 040925 693 SDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS-EASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLL 771 (833)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~ 771 (833)
.... .......||+.|+|||++.+. .++.++|||| .|+++|+++++..|+...+.. ...
T Consensus 147 ~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~Dvws----------lGvil~elltG~~Pf~~~~~~--~~~ 206 (330)
T cd05586 147 LTDN--------KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWS----------LGVLVFEMCCGWSPFYAEDTQ--QMY 206 (330)
T ss_pred CCCC--------CCccCccCCccccCHHHHcCCCCCCCccceec----------cccEEEEeccCCCCCCCCCHH--HHH
Confidence 2211 111235699999999998764 4899999999 555566666666665422110 010
Q ss_pred hhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCC----CHHHHHH
Q 040925 772 MEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERM----DMRDVVA 819 (833)
Q Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP----t~~eil~ 819 (833)
........ +......++.+.+++.+||..||++|| ++.++++
T Consensus 207 ~~i~~~~~------~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 207 RNIAFGKV------RFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred HHHHcCCC------CCCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 11100000 000112355678999999999999998 4666654
No 238
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.2e-33 Score=293.86 Aligned_cols=256 Identities=26% Similarity=0.455 Sum_probs=200.1
Q ss_pred HhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceE
Q 040925 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 529 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
..++|++.+.||+|++|.||+|... +++.||||.++... ...+++.+|+.++++++||||+++++++.... ..
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~ 76 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEE-----PI 76 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCC-----ce
Confidence 3468999999999999999999986 56789999987432 34567899999999999999999999865443 78
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
++||||+++++|.+++...... .+++.++..++.|++.|++|||+. +++|+||||+||+++.++.+||+|||.
T Consensus 77 ~~v~e~~~~~~L~~~i~~~~~~----~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~ 149 (261)
T cd05034 77 YIVTEYMSKGSLLDFLKSGEGK----KLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGL 149 (261)
T ss_pred EEEEeccCCCCHHHHHhccccC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECcccc
Confidence 9999999999999999765422 689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCccccccc
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEIVD 767 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~~~ 767 (833)
+.......... .....++..|+|||.+.+..++.++|||| .|++++++++ +..|+.... +
T Consensus 150 ~~~~~~~~~~~-------~~~~~~~~~y~~PE~~~~~~~~~~~Di~s----------lG~il~~l~t~g~~p~~~~~--~ 210 (261)
T cd05034 150 ARLIEDDEYTA-------REGAKFPIKWTAPEAANYGRFTIKSDVWS----------FGILLTEIVTYGRVPYPGMT--N 210 (261)
T ss_pred ceeccchhhhh-------hhccCCCccccCHHHhccCCcCchhHHHH----------HHHHHHHHHhCCCCCCCCCC--H
Confidence 98665321111 11123567899999999888999999999 7777888877 666653211 1
Q ss_pred ccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 040925 768 PSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCH 823 (833)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 823 (833)
...... +.... ....+.+++..+.+++.+||..+|++||+++++.+.|+.
T Consensus 211 ~~~~~~-~~~~~-----~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 211 REVLEQ-VERGY-----RMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred HHHHHH-HHcCC-----CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 111111 11110 001122335678999999999999999999999998874
No 239
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.4e-33 Score=303.37 Aligned_cols=256 Identities=20% Similarity=0.238 Sum_probs=194.9
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeecc---CCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK---YKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
++|++.+.||+|+||.||+|++..+++.||+|++... .......+.+|..++..++|++|+++++++...+ .
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~-----~ 75 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDEN-----Y 75 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC-----E
Confidence 4799999999999999999999999999999998642 1223345788999999999999999999976544 8
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.|+||||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~Ey~~gg~L~~~l~~~~~-----~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG 147 (331)
T cd05624 76 LYLVMDYYVGGDLLTLLSKFED-----RLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFG 147 (331)
T ss_pred EEEEEeCCCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEecc
Confidence 9999999999999999976432 588999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCC-----CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-----SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKV 762 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~ 762 (833)
+++........ ......||+.|+|||++.+ ..++.++|||| .|+++|+++++..|+..
T Consensus 148 ~a~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwS----------lGvil~ell~g~~Pf~~ 210 (331)
T cd05624 148 SCLKMNQDGTV-------QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWS----------LGVCMYEMLYGETPFYA 210 (331)
T ss_pred ceeeccCCCce-------eeccccCCcccCCHHHHhccccCCCCCCCcccEEe----------eehhhhhhhhCCCCccC
Confidence 99765432211 1112469999999998865 46788999999 78888999999888753
Q ss_pred cccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCC--CCCHHHHHHH
Q 040925 763 MEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFE--RMDMRDVVAK 820 (833)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~eil~~ 820 (833)
....+ ............. ......+.+..+.+++.+|+..+|++ |++++++++.
T Consensus 211 ~~~~~--~~~~i~~~~~~~~--~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 211 ESLVE--TYGKIMNHEERFQ--FPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred CCHHH--HHHHHHcCCCccc--CCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 22111 0011111000000 00111234567888999998866544 4688888764
No 240
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=9.1e-34 Score=301.27 Aligned_cols=261 Identities=23% Similarity=0.374 Sum_probs=198.9
Q ss_pred hcCCccCceeccCcceEEEEEEECCCce----EEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCC
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEM----IVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFKG 604 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 604 (833)
.++|+..+.||+|+||.||+|.+..++. .||+|.+..... .....+.+|+.++++++||||+++++++...
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~---- 81 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP---- 81 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC----
Confidence 3568889999999999999999876665 578888864332 2234688999999999999999999987543
Q ss_pred CceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEc
Q 040925 605 TDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVC 684 (833)
Q Consensus 605 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 684 (833)
..++++||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 82 --~~~~v~e~~~~g~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~ 151 (303)
T cd05110 82 --TIQLVTQLMPHGCLLDYVHEHKD-----NIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKIT 151 (303)
T ss_pred --CceeeehhcCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEc
Confidence 35789999999999999876532 578999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCccc
Q 040925 685 DFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVM 763 (833)
Q Consensus 685 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~ 763 (833)
|||+++......... ......++..|+|||++.+..++.++|||| +|++++++++ +..|+...
T Consensus 152 Dfg~~~~~~~~~~~~------~~~~~~~~~~y~~PE~~~~~~~~~~~Diws----------lG~~l~el~t~g~~p~~~~ 215 (303)
T cd05110 152 DFGLARLLEGDEKEY------NADGGKMPIKWMALECIHYRKFTHQSDVWS----------YGVTIWELMTFGGKPYDGI 215 (303)
T ss_pred cccccccccCccccc------ccCCCccccccCCHHHhccCCCChHHHHHH----------HHHHHHHHHhCCCCCCCCC
Confidence 999998654322110 111234678899999999889999999999 6777778776 55554311
Q ss_pred ccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhhhh
Q 040925 764 EIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRETF 828 (833)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~~~ 828 (833)
. .....+....... ...+..++..+.+++.+||..+|++||+++++++.+..+.+..
T Consensus 216 ~---~~~~~~~~~~~~~-----~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 216 P---TREIPDLLEKGER-----LPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred C---HHHHHHHHHCCCC-----CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 1 0000111111100 0011223456889999999999999999999999999987654
No 241
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=2.5e-34 Score=298.27 Aligned_cols=240 Identities=21% Similarity=0.335 Sum_probs=184.7
Q ss_pred ceeccCcceEEEEEEECCCce-------EEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 537 NMIGQGSFGYVYKGTLGEDEM-------IVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~~~-------~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
+.||+|+||.||+|.+...+. .||+|.+........+.+.+|+.+++.++||||+++++++.... ..+
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~-----~~~ 75 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGD-----ESI 75 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCC-----CcE
Confidence 469999999999998865443 48888886544444567889999999999999999999976544 789
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCc--------E
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMV--------A 681 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~--------~ 681 (833)
+||||+++|+|.+++...+. .+++..++.++.|++.||+|||+. +|+||||||+||+++.++. +
T Consensus 76 lv~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~ 147 (258)
T cd05078 76 MVQEYVKFGSLDTYLKKNKN-----LINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFI 147 (258)
T ss_pred EEEecCCCCcHHHHHhcCCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceE
Confidence 99999999999999986542 588999999999999999999999 9999999999999987765 6
Q ss_pred EEcccccccccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCccccCCccHHHHHHHh-CC
Q 040925 682 HVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTA-LP 759 (833)
Q Consensus 682 kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~-~p 759 (833)
+++|||.+....... ...+++.|+|||++.+ ..++.++|||| +|+++++++++. .|
T Consensus 148 ~l~d~g~~~~~~~~~------------~~~~~~~y~aPE~~~~~~~~~~~~Diws----------lG~~l~~l~~g~~~~ 205 (258)
T cd05078 148 KLSDPGISITVLPKE------------ILLERIPWVPPECIENPQNLSLAADKWS----------FGTTLWEIFSGGDKP 205 (258)
T ss_pred EecccccccccCCch------------hccccCCccCchhccCCCCCCchhhHHH----------HHHHHHHHHcCCCCC
Confidence 999999886543211 2358889999999876 45789999999 677777777763 33
Q ss_pred CcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 040925 760 EKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKL 821 (833)
Q Consensus 760 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 821 (833)
+...+ +........... ..+.....++.+++.+||+.||++|||++++++.|
T Consensus 206 ~~~~~---~~~~~~~~~~~~-------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 206 LSALD---SQKKLQFYEDRH-------QLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred hhhcc---HHHHHHHHHccc-------cCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 32111 111111111100 01112235688999999999999999999999876
No 242
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.1e-33 Score=304.00 Aligned_cols=261 Identities=18% Similarity=0.184 Sum_probs=191.1
Q ss_pred cCceeccC--cceEEEEEEECCCceEEEEEEeeccCC--cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeE
Q 040925 535 SSNMIGQG--SFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAF 610 (833)
Q Consensus 535 ~~~~lg~G--~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 610 (833)
+.++||+| ++++||+++.+.+++.||+|+++.... ...+.+.+|+++++.++||||+++++++...+ ..++
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~-----~~~l 76 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN-----ELWV 76 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECC-----EEEE
Confidence 45789999 678999999999999999999975422 23456788999999999999999999986655 8899
Q ss_pred EEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccc
Q 040925 611 VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690 (833)
Q Consensus 611 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 690 (833)
||||+++|+|.+++...... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.++++|||.+.
T Consensus 77 v~e~~~~~~l~~~~~~~~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~ 149 (327)
T cd08227 77 VTSFMAYGSAKDLICTHFMD----GMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNL 149 (327)
T ss_pred EEeccCCCcHHHHHHhhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhh
Confidence 99999999999999764322 589999999999999999999999 99999999999999999999999998765
Q ss_pred ccCcccccccccCCCccccccccccccCccccCC--CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccc
Q 040925 691 FLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG--SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDP 768 (833)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~ 768 (833)
........... .........++..|+|||++.+ ..++.++|||| +|+++++++++..|+..... .
T Consensus 150 ~~~~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws----------lG~il~el~~g~~pf~~~~~--~ 216 (327)
T cd08227 150 SMINHGQRLRV-VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYS----------VGITACELANGHVPFKDMPA--T 216 (327)
T ss_pred ccccccccccc-cccccccccceecccChHHhhcccCCCCchhhHHH----------HHHHHHHHHHCCCCCCCcch--h
Confidence 43221110000 0011122357888999999876 45899999999 67777777777776541110 0
Q ss_pred cchhhhcccc-------------------------------c--------hhhhhhhhchHHHHHHHHHHhhccCCCCCC
Q 040925 769 SLLMEVMTNN-------------------------------S--------MIQEDKRVKTEECLNAIIRTGVLCSMESPF 809 (833)
Q Consensus 769 ~~~~~~~~~~-------------------------------~--------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 809 (833)
.......... . ............+.+.+.+++.+||+.||+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~ 296 (327)
T cd08227 217 QMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPD 296 (327)
T ss_pred HHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCch
Confidence 0000000000 0 000000011223456789999999999999
Q ss_pred CCCCHHHHHHH
Q 040925 810 ERMDMRDVVAK 820 (833)
Q Consensus 810 ~RPt~~eil~~ 820 (833)
+|||++|+++.
T Consensus 297 ~Rpt~~ell~~ 307 (327)
T cd08227 297 ARPSASTLLNH 307 (327)
T ss_pred hcCCHHHHhcC
Confidence 99999999874
No 243
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=8.9e-34 Score=299.40 Aligned_cols=262 Identities=24% Similarity=0.370 Sum_probs=197.0
Q ss_pred hcCCccCceeccCcceEEEEEEECC-----CceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCC
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGE-----DEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFK 603 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 603 (833)
.++|++.+.||+|+||.||+|.+.. ++..||+|.++.... ...+.+.+|+.++++++||||+++++++...+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~-- 81 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGK-- 81 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC--
Confidence 4679999999999999999998743 578899999875432 23456889999999999999999999976544
Q ss_pred CCceEeEEEEecCCCChhhhhccCCCc----------------cccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeC
Q 040925 604 GTDFKAFVFEYMENGSLKDWLHQSDDQ----------------VEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGD 667 (833)
Q Consensus 604 ~~~~~~lv~e~~~~gsL~~~l~~~~~~----------------~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~D 667 (833)
..++||||+++|+|.+++...... .....+++.+++.++.|++.||+|||+. +++|||
T Consensus 82 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~d 155 (288)
T cd05050 82 ---PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRD 155 (288)
T ss_pred ---ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---Ceeccc
Confidence 789999999999999999753211 1112578899999999999999999999 999999
Q ss_pred CCCCCeeecCCCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCC
Q 040925 668 LKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEG 747 (833)
Q Consensus 668 lkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g 747 (833)
|||+||++++++.+||+|||.+.......... ......+++.|+|||++.+..++.++|||| +|
T Consensus 156 l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s----------lG 219 (288)
T cd05050 156 LATRNCLVGENMVVKIADFGLSRNIYSADYYK------ASENDAIPIRWMPPESIFYNRYTTESDVWA----------YG 219 (288)
T ss_pred ccHhheEecCCCceEECccccceecccCcccc------ccCCCccChhhcCHHHHhcCCCCchhHHHH----------HH
Confidence 99999999999999999999987553321100 011123567899999998889999999999 66
Q ss_pred ccHHHHHH-HhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 040925 748 HSLHEFAK-TALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCH 823 (833)
Q Consensus 748 ~~l~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 823 (833)
++++++++ +..|+.... ............. ...+..++..+.+++.+||+.||++|||+.|+++.|++
T Consensus 220 ~il~el~~~~~~p~~~~~--~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 220 VVLWEIFSYGMQPYYGMA--HEEVIYYVRDGNV------LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred HHHHHHHhCCCCCCCCCC--HHHHHHHHhcCCC------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 66777665 444432111 0111111100100 01122346778999999999999999999999998863
No 244
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.3e-33 Score=304.46 Aligned_cols=264 Identities=23% Similarity=0.363 Sum_probs=199.3
Q ss_pred cCCccCceeccCcceEEEEEEECC-------CceEEEEEEeeccCC-cchhHHHHHHHHHhhc-CCCccceEeeEeecCC
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGE-------DEMIVAVKVINLKYK-GASRSFVAECEALRNI-RHRNLIKIITICSSTD 601 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 601 (833)
.+|++.+.||+|+||.||+|++.. .+..||+|.++.... ...+.+.+|+++++++ +||||+++++++....
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 469999999999999999998642 234789998874322 2346789999999999 7999999999976544
Q ss_pred CCCCceEeEEEEecCCCChhhhhccCCCc----------cccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCC
Q 040925 602 FKGTDFKAFVFEYMENGSLKDWLHQSDDQ----------VEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPS 671 (833)
Q Consensus 602 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~ 671 (833)
..+++|||+++|+|.+++...... .....+++.++..++.|++.||+|||+. +|+||||||+
T Consensus 92 -----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~ 163 (334)
T cd05100 92 -----PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAAR 163 (334)
T ss_pred -----ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ceeccccccc
Confidence 789999999999999999764311 1122588899999999999999999999 9999999999
Q ss_pred CeeecCCCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHH
Q 040925 672 NVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLH 751 (833)
Q Consensus 672 NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~ 751 (833)
||+++.++.+||+|||+++......... ......++..|+|||++.+..++.++|||| +|++++
T Consensus 164 Nill~~~~~~kL~Dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s----------lG~il~ 227 (334)
T cd05100 164 NVLVTEDNVMKIADFGLARDVHNIDYYK------KTTNGRLPVKWMAPEALFDRVYTHQSDVWS----------FGVLLW 227 (334)
T ss_pred eEEEcCCCcEEECCcccceecccccccc------cccCCCcCceEcCHHHhccCCcCchhhhHH----------HHHHHH
Confidence 9999999999999999998654322111 011123467899999999999999999999 677777
Q ss_pred HHHH-HhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhh
Q 040925 752 EFAK-TALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRE 826 (833)
Q Consensus 752 ~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~ 826 (833)
++++ +..|+...... .. ........ ....+..++..+.+++.+||+.+|++|||+.|+++.|+++..
T Consensus 228 el~~~g~~p~~~~~~~--~~-~~~~~~~~-----~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~ 295 (334)
T cd05100 228 EIFTLGGSPYPGIPVE--EL-FKLLKEGH-----RMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT 295 (334)
T ss_pred HHHhcCCCCCCCCCHH--HH-HHHHHcCC-----CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence 7776 55554321110 01 11111100 001122345678899999999999999999999999998874
No 245
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.2e-33 Score=297.99 Aligned_cols=258 Identities=22% Similarity=0.304 Sum_probs=193.2
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC--cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
+|++.+.||+|++|.||+|++..++..||+|+++.... ...+.+.+|+.++++++||||+++++++.... ..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 75 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQES-----RLY 75 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCC-----eEE
Confidence 58899999999999999999998999999999864422 23467889999999999999999999976544 899
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||++ ++|.+++...... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 76 ~v~e~~~-~~l~~~~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~ 148 (285)
T cd07861 76 LIFEFLS-MDLKKYLDSLPKG---QYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLA 148 (285)
T ss_pred EEEecCC-CCHHHHHhcCCCC---CcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccce
Confidence 9999997 6899888654321 1689999999999999999999999 9999999999999999999999999998
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCC-CCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS-EASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDP 768 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~ 768 (833)
........ ......+++.|+|||++.+. .++.++|||| +|++++++.++..|+......+.
T Consensus 149 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~s----------lG~il~~l~tg~~~~~~~~~~~~ 210 (285)
T cd07861 149 RAFGIPVR--------VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWS----------IGTIFAEMATKKPLFHGDSEIDQ 210 (285)
T ss_pred eecCCCcc--------cccCCcccccccChHHhcCCCCcCcHHHHHH----------HHHHHHHHHHCCCCCCCCCHHHH
Confidence 75533211 11123578999999987654 4788999999 77778888887766542211110
Q ss_pred cchh---------h-------hccccch----hhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 769 SLLM---------E-------VMTNNSM----IQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 769 ~~~~---------~-------~~~~~~~----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
.... . ....... ...........+++++.+++.+||..||++|||++++++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 211 LFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred HHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000 0 0000000 000000011224567789999999999999999999975
No 246
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.7e-33 Score=294.12 Aligned_cols=254 Identities=26% Similarity=0.383 Sum_probs=190.5
Q ss_pred ceeccCcceEEEEEEECCCce--EEEEEEeeccC-CcchhHHHHHHHHHhhc-CCCccceEeeEeecCCCCCCceEeEEE
Q 040925 537 NMIGQGSFGYVYKGTLGEDEM--IVAVKVINLKY-KGASRSFVAECEALRNI-RHRNLIKIITICSSTDFKGTDFKAFVF 612 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 612 (833)
+.||+|+||.||+|+..+++. .+|+|.++... ....+.+.+|+++++++ +||||+++++++...+ ..++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-----~~~lv~ 75 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG-----YLYLAI 75 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCC-----CceEEE
Confidence 368999999999999977765 46888886332 23446788999999999 7999999999976554 789999
Q ss_pred EecCCCChhhhhccCCCc----------cccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEE
Q 040925 613 EYMENGSLKDWLHQSDDQ----------VEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH 682 (833)
Q Consensus 613 e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 682 (833)
||+++|+|.+++...... .....+++.+++.++.|++.|++|||+. +++||||||+||++++++.+|
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~k 152 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAK 152 (270)
T ss_pred EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEE
Confidence 999999999999764311 1112578999999999999999999999 999999999999999999999
Q ss_pred EcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCc
Q 040925 683 VCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEK 761 (833)
Q Consensus 683 L~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~ 761 (833)
|+|||++........ ......++.|+|||++.+..++.++|||| +|++++++++ +..|+.
T Consensus 153 l~dfgl~~~~~~~~~---------~~~~~~~~~y~apE~~~~~~~~~~~Di~s----------lG~il~el~~~g~~pf~ 213 (270)
T cd05047 153 IADFGLSRGQEVYVK---------KTMGRLPVRWMAIESLNYSVYTTNSDVWS----------YGVLLWEIVSLGGTPYC 213 (270)
T ss_pred ECCCCCccccchhhh---------ccCCCCccccCChHHHccCCCCchhhHHH----------HHHHHHHHHcCCCCCcc
Confidence 999999863221100 00112466799999998888999999999 6677777775 666653
Q ss_pred ccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhh
Q 040925 762 VMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTR 825 (833)
Q Consensus 762 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~ 825 (833)
.... ........ ... ....+..++..+.+++.+||..||.+|||+.++++.|..+.
T Consensus 214 ~~~~--~~~~~~~~-~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 214 GMTC--AELYEKLP-QGY-----RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred ccCH--HHHHHHHh-CCC-----CCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 2111 01111100 000 00011224567889999999999999999999999998875
No 247
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.7e-33 Score=293.48 Aligned_cols=255 Identities=22% Similarity=0.338 Sum_probs=198.4
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC------cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCC
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK------GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGT 605 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 605 (833)
+|++.+.||+|+||.||+|... +++.+|+|.++.... ...+.+.+|++++++++|+||+++++++.+..
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---- 75 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDN---- 75 (265)
T ss_pred CccccceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCC----
Confidence 5888999999999999999875 788999999864321 12246889999999999999999999976554
Q ss_pred ceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcc
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 685 (833)
..++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+|+||+|+||++++++.+||+|
T Consensus 76 -~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~d 145 (265)
T cd06631 76 -TISIFMEFVPGGSISSILNRFG------PLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLID 145 (265)
T ss_pred -eEEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEecc
Confidence 8999999999999999997654 578999999999999999999999 999999999999999999999999
Q ss_pred cccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccc
Q 040925 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEI 765 (833)
Q Consensus 686 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~ 765 (833)
||++........... .........|+..|+|||++.+..++.++|+|| +|+.+++++++..|+...+.
T Consensus 146 fg~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~s----------lG~~~~~l~~g~~p~~~~~~ 213 (265)
T cd06631 146 FGCARRLAWVGLHGT--HSNMLKSMHGTPYWMAPEVINESGYGRKSDIWS----------IGCTVFEMATGKPPLASMDR 213 (265)
T ss_pred chhhHhhhhcccccc--ccccccccCCCccccChhhhcCCCCcchhhHHH----------HHHHHHHHHhCCCccccCCh
Confidence 999876532111100 011122346899999999999888999999999 88889999999988753221
Q ss_pred ccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 766 VDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
....... ..... .....+..++..+.+++.+||..+|++|||+.|+++
T Consensus 214 ~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 214 LAAMFYI--GAHRG----LMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred HHHHHHh--hhccC----CCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1111000 00000 001112235667889999999999999999999875
No 248
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.7e-33 Score=290.69 Aligned_cols=247 Identities=25% Similarity=0.376 Sum_probs=189.5
Q ss_pred ceeccCcceEEEEEEECCCceEEEEEEeeccCCc-chhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEEEec
Q 040925 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG-ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYM 615 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 615 (833)
+.||+|+||.||+|... ++..||+|.++..... ....+.+|++++++++||||+++++++.... ..++||||+
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~~ 74 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQ-----PIYIVMELV 74 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCC-----ccEEEEECC
Confidence 47899999999999875 6888999998654322 2346889999999999999999999976554 789999999
Q ss_pred CCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccCcc
Q 040925 616 ENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDH 695 (833)
Q Consensus 616 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 695 (833)
++|+|.+++..... .+++..++.++.|++.||.|+|+. +++||||||+||+++.++.+||+|||++......
T Consensus 75 ~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 146 (250)
T cd05085 75 PGGDFLSFLRKKKD-----ELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDG 146 (250)
T ss_pred CCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceecccc
Confidence 99999999875432 578999999999999999999999 9999999999999999999999999998754332
Q ss_pred cccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCcccccccccchhhh
Q 040925 696 QLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEIVDPSLLMEV 774 (833)
Q Consensus 696 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~~~~~~~~~~ 774 (833)
.... .....+++.|+|||++.+..++.++|||| +|+.++++.+ +..|+...... .....
T Consensus 147 ~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~s----------lG~ll~~~~~~g~~p~~~~~~~--~~~~~- 206 (250)
T cd05085 147 IYSS-------SGLKQIPIKWTAPEALNYGRYSSESDVWS----------YGILLWETFSLGVCPYPGMTNQ--QAREQ- 206 (250)
T ss_pred cccc-------CCCCCCcccccCHHHhccCCCCchhHHHH----------HHHHHHHHhcCCCCCCCCCCHH--HHHHH-
Confidence 1110 01123467899999998888999999999 6777777766 55565321111 11000
Q ss_pred ccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 040925 775 MTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLC 822 (833)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 822 (833)
..... ....+..++..+.+++.+||..+|++|||+.|+.+.|.
T Consensus 207 ~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 207 VEKGY-----RMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHcCC-----CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 00000 00112234567899999999999999999999998874
No 249
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.3e-33 Score=295.90 Aligned_cols=262 Identities=24% Similarity=0.311 Sum_probs=201.6
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
++|+..+.||.|++|.||+|.+..+++.||+|.+..... .....+.+|++++++++||||+++++++.... ....+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~---~~~~~ 77 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDES---SSSIG 77 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccC---CCeEE
Confidence 468889999999999999999988999999999875432 34567899999999999999999999875432 34689
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||+++++|.+++...... ...+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++
T Consensus 78 lv~e~~~~~~L~~~l~~~~~~--~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~ 152 (287)
T cd06621 78 IAMEYCEGGSLDSIYKKVKKR--GGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVS 152 (287)
T ss_pred EEEEecCCCCHHHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccc
Confidence 999999999999987643211 12588999999999999999999999 9999999999999999999999999998
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccc--cc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEI--VD 767 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~--~~ 767 (833)
........ ....++..|+|||.+.+..++.++|||+ .|+++++++++..|+..... ..
T Consensus 153 ~~~~~~~~----------~~~~~~~~y~~pE~~~~~~~~~~~Dv~s----------lG~il~~l~~g~~p~~~~~~~~~~ 212 (287)
T cd06621 153 GELVNSLA----------GTFTGTSFYMAPERIQGKPYSITSDVWS----------LGLTLLEVAQNRFPFPPEGEPPLG 212 (287)
T ss_pred cccccccc----------ccccCCccccCHHHhcCCCCCchhhHHH----------HHHHHHHHHhCCCCCCcccCCCCC
Confidence 75533211 1234788999999999889999999999 88889999999888763321 11
Q ss_pred ccchhhhccc-cchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 768 PSLLMEVMTN-NSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 768 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
+......... ...............++.+.+++.+||..||++|||+.|+++.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 213 PIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred hHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 1111111111 0000000111011245678999999999999999999999884
No 250
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=2e-33 Score=291.33 Aligned_cols=251 Identities=21% Similarity=0.291 Sum_probs=201.6
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccC--CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
+|++.+.||.|+||.||.++...+++.||+|.+.... ....+.+.+|++++++++|+||+++++++.+.. ..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~ 75 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDN-----TLL 75 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCC-----eEE
Confidence 5889999999999999999999999999999986442 334567889999999999999999999976544 899
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
++|||+++|+|.+++...... .+++.++..++.|++.|++|||+. +++||||||+||++++++.+||+|||.+
T Consensus 76 ~~~e~~~~~~L~~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~ 148 (256)
T cd08221 76 IEMEYANGGTLYDKIVRQKGQ----LFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGIS 148 (256)
T ss_pred EEEEecCCCcHHHHHHhcccc----CCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcce
Confidence 999999999999999865322 689999999999999999999999 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPS 769 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~ 769 (833)
........ ......|++.|+|||+..+..++.++|+|| +|++++++.++..|+..... ..
T Consensus 149 ~~~~~~~~--------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~s----------lG~i~~~l~~g~~~~~~~~~--~~ 208 (256)
T cd08221 149 KILGSEYS--------MAETVVGTPYYMSPELCQGVKYNFKSDIWA----------LGCVLYELLTLKRTFDATNP--LN 208 (256)
T ss_pred EEcccccc--------cccccCCCccccCHhhcCCCCCCCcchhHH----------HHHHHHHHHHCCCCCCCCCH--HH
Confidence 86544321 112346899999999998888899999999 78888888888777542211 11
Q ss_pred chhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 770 LLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.......... ......++..+.+++.+||..+|++||+++++++.
T Consensus 209 ~~~~~~~~~~------~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 209 LVVKIVQGNY------TPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred HHHHHHcCCC------CCCccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 1111111111 11123356678899999999999999999999875
No 251
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.4e-33 Score=299.68 Aligned_cols=268 Identities=19% Similarity=0.277 Sum_probs=199.1
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC-CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceE
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY-KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
.++|++.+.||+|+||.||+|++..+++.||+|.++... ......+.+|+.++++++||||+++++++.... ..
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~-----~~ 79 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEK-----SL 79 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCC-----eE
Confidence 357999999999999999999999899999999987443 223456788999999999999999999976544 89
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
++||||++ ++|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 80 ~lv~e~~~-~~l~~~l~~~~~-----~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~ 150 (301)
T cd07873 80 TLVFEYLD-KDLKQYLDDCGN-----SINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGL 150 (301)
T ss_pred EEEEeccc-cCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcc
Confidence 99999997 599998876432 578999999999999999999999 999999999999999999999999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD 767 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~ 767 (833)
+........ ......+++.|+|||++.+ ..++.++|||| .|+++++++++..|+...+..+
T Consensus 151 ~~~~~~~~~--------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~s----------lG~~l~el~tg~~~f~~~~~~~ 212 (301)
T cd07873 151 ARAKSIPTK--------TYSNEVVTLWYRPPDILLGSTDYSTQIDMWG----------VGCIFYEMSTGRPLFPGSTVEE 212 (301)
T ss_pred hhccCCCCC--------cccccceeecccCcHHHhCCCCCccHHHHHH----------HHHHHHHHHhCCCCCCCCCHHH
Confidence 975432211 1112357899999998765 45788999999 7778888888877654221100
Q ss_pred -------------ccchhhhccccc----hhh----hhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH--HHHh
Q 040925 768 -------------PSLLMEVMTNNS----MIQ----EDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK--LCHT 824 (833)
Q Consensus 768 -------------~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~--L~~i 824 (833)
............ ... ..........++.+.+++.+|++.||.+|||++|+++. +..+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~ 292 (301)
T cd07873 213 QLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCL 292 (301)
T ss_pred HHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 000000000000 000 00001112345577899999999999999999999873 5444
Q ss_pred hhhhh
Q 040925 825 RETFL 829 (833)
Q Consensus 825 ~~~~~ 829 (833)
.+.+.
T Consensus 293 ~~~~~ 297 (301)
T cd07873 293 GERIH 297 (301)
T ss_pred cchhh
Confidence 44443
No 252
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.9e-34 Score=299.25 Aligned_cols=249 Identities=23% Similarity=0.324 Sum_probs=203.9
Q ss_pred HHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCc--chhHHHHHHHHHhhcCCCccceEeeEeecCCCCCC
Q 040925 528 KATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG--ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGT 605 (833)
Q Consensus 528 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 605 (833)
...+.|.+.+.||+|.|++|.+|++..++..||+|.+++..-. ....+.+|+++|..++|||||+++.+.....
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~---- 128 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEA---- 128 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecc----
Confidence 3457899999999999999999999999999999999755332 2356899999999999999999999966555
Q ss_pred ceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcc
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 685 (833)
..|+||||+.+|.+++|+..++ ...+..+..++.|+..|++|||++ .|||||||.+||+++.+..+||+|
T Consensus 129 -~lylV~eya~~ge~~~yl~~~g------r~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaD 198 (596)
T KOG0586|consen 129 -TLYLVMEYASGGELFDYLVKHG------RMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIAD 198 (596)
T ss_pred -eeEEEEEeccCchhHHHHHhcc------cchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeec
Confidence 8999999999999999999887 566789999999999999999999 999999999999999999999999
Q ss_pred cccccccCcccccccccCCCccccccccccccCccccCCCCC-CcccccccCCcCCCccccCCccHHHHHHHhCCCcc--
Q 040925 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEA-SMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKV-- 762 (833)
Q Consensus 686 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~-- 762 (833)
||++..+..... ....+|++.|.|||++.+.+| .+.+|+|| .|+++|-++.+.+|++-
T Consensus 199 fgfS~~~~~~~~---------lqt~cgsppyAaPEl~~g~~y~gpe~D~Ws----------lgvvly~LV~GsLPFDG~~ 259 (596)
T KOG0586|consen 199 FGFSTFFDYGLM---------LQTFCGSPPYAAPELFNGKKYDGPEVDIWS----------LGVVLYALVEGSLPFDGQN 259 (596)
T ss_pred cccceeeccccc---------ccccCCCCCccChHhhcCcccCCcceehhh----------hhhhheeeeecccccCCcc
Confidence 999988765332 334689999999999998876 57899999 77778888888888762
Q ss_pred cccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 763 MEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.....++.. .....+ +-....+..+++.+++..+|.+|+++++|.+.
T Consensus 260 lk~Lr~rvl----~gk~rI-------p~~ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 260 LKELRPRVL----RGKYRI-------PFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred cccccchhe----eeeecc-------cceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence 222222221 111111 11123345688889999999999999999765
No 253
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=8.7e-34 Score=297.66 Aligned_cols=248 Identities=25% Similarity=0.343 Sum_probs=198.3
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccC-CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeE
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY-KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAF 610 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 610 (833)
.|+..+.||+|+||.||+|.+..+++.||+|.++... ....+.+.+|++++++++||||+++++++... ...++
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~l 79 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKG-----TKLWI 79 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccC-----CceEE
Confidence 4777889999999999999998889999999987443 23346789999999999999999999986544 48999
Q ss_pred EEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccc
Q 040925 611 VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690 (833)
Q Consensus 611 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 690 (833)
||||+++++|.+++... .+++..++.++.|+++|+.|||+. +++|+||+|+||++++++.+||+|||++.
T Consensus 80 v~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~ 149 (277)
T cd06642 80 IMEYLGGGSALDLLKPG-------PLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAG 149 (277)
T ss_pred EEEccCCCcHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccc
Confidence 99999999999998643 588999999999999999999999 99999999999999999999999999997
Q ss_pred ccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccc
Q 040925 691 FLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSL 770 (833)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~ 770 (833)
....... ......|+..|+|||++.+..++.++|+|| +|+++++++++..|+.......
T Consensus 150 ~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s----------lG~il~el~tg~~p~~~~~~~~--- 208 (277)
T cd06642 150 QLTDTQI--------KRNTFVGTPFWMAPEVIKQSAYDFKADIWS----------LGITAIELAKGEPPNSDLHPMR--- 208 (277)
T ss_pred cccCcch--------hhhcccCcccccCHHHhCcCCCchhhhHHH----------HHHHHHHHHhCCCCCcccchhh---
Confidence 6543221 111235889999999999888999999999 7888899999888764221111
Q ss_pred hhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 771 LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
......... .......++..+.+++.+||..+|++|||+.++++.
T Consensus 209 ~~~~~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 209 VLFLIPKNS-----PPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred HHhhhhcCC-----CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 000000000 011122346678899999999999999999999985
No 254
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=3.1e-33 Score=291.62 Aligned_cols=254 Identities=20% Similarity=0.283 Sum_probs=195.8
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC-----cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCC
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-----GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGT 605 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 605 (833)
.+|+..+.||+|+||.||+|.+..++..||+|.++.... ...+.+.+|+.++++++||||+++++++.... .
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---~ 78 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRA---E 78 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCC---C
Confidence 368999999999999999999998999999999864321 12356888999999999999999999875432 3
Q ss_pred ceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcc
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 685 (833)
...+++|||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 79 ~~~~l~~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~d 149 (266)
T cd06651 79 KTLTIFMEYMPGGSVKDQLKAYG------ALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGD 149 (266)
T ss_pred CEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEcc
Confidence 46889999999999999997654 578999999999999999999999 999999999999999999999999
Q ss_pred cccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccc
Q 040925 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEI 765 (833)
Q Consensus 686 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~ 765 (833)
||+++......... .......++..|+|||++.+..++.++|||| .|+++++++++..|+...+.
T Consensus 150 fg~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s----------lG~i~~el~~g~~pf~~~~~ 214 (266)
T cd06651 150 FGASKRLQTICMSG-----TGIRSVTGTPYWMSPEVISGEGYGRKADVWS----------LGCTVVEMLTEKPPWAEYEA 214 (266)
T ss_pred CCCccccccccccC-----CccccCCccccccCHHHhCCCCCCchhhhHH----------HHHHHHHHHHCCCCccccch
Confidence 99987653321100 1112245899999999999888999999999 78888999998888652211
Q ss_pred ccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 766 VDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
. ......... ......+....+.+.+++ +||..+|++||+++||++
T Consensus 215 ~--~~~~~~~~~-----~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 215 M--AAIFKIATQ-----PTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred H--HHHHHHhcC-----CCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 1 000000000 000111223445566776 688899999999999976
No 255
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=2.2e-33 Score=292.09 Aligned_cols=254 Identities=28% Similarity=0.464 Sum_probs=198.2
Q ss_pred ceeccCcceEEEEEEECCC---ceEEEEEEeeccCCcc-hhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEE
Q 040925 537 NMIGQGSFGYVYKGTLGED---EMIVAVKVINLKYKGA-SRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVF 612 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 612 (833)
+.||+|+||.||+|..... +..||+|.++...... .+.+.+|++.++.++|+||+++++++... ...++||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~~~lv~ 75 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEE-----EPLYLVL 75 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCC-----CceEEEE
Confidence 4799999999999999865 8899999997554333 57889999999999999999999997653 4899999
Q ss_pred EecCCCChhhhhccCCCc---cccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 613 EYMENGSLKDWLHQSDDQ---VEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 613 e~~~~gsL~~~l~~~~~~---~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
||+++++|.+++...... .....+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||.+
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~ 152 (262)
T cd00192 76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLS 152 (262)
T ss_pred EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEcccccc
Confidence 999999999999875210 0012689999999999999999999999 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHH-hCCCcccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKT-ALPEKVMEIVDP 768 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~-~~p~~~~~~~~~ 768 (833)
........ ........+++.|+|||.+.+..++.++|||| .|++++++.++ ..|+.... ..
T Consensus 153 ~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s----------lG~il~~l~~~g~~p~~~~~--~~ 214 (262)
T cd00192 153 RDVYDDDY------YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWS----------FGVLLWEIFTLGATPYPGLS--NE 214 (262)
T ss_pred cccccccc------cccccCCCcCccccCHHHhccCCcchhhccHH----------HHHHHHHHHhcCCCCCCCCC--HH
Confidence 87654321 01122345789999999988888999999999 77788888773 66654321 11
Q ss_pred cchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 040925 769 SLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLC 822 (833)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 822 (833)
.... ..... .....+..++..+.+++.+||..||++|||+.|+++.|+
T Consensus 215 ~~~~-~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 215 EVLE-YLRKG-----YRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred HHHH-HHHcC-----CCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 1111 11110 011123344678899999999999999999999998763
No 256
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-35 Score=329.60 Aligned_cols=258 Identities=25% Similarity=0.342 Sum_probs=206.0
Q ss_pred HHHHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC--cchhHHHHHHHHHhhcCCCccceEeeEeecCCCC
Q 040925 526 LSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNIRHRNLIKIITICSSTDFK 603 (833)
Q Consensus 526 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 603 (833)
+...+-+|....+||.|.||.||-|.+.++|+..|+|.++.... ...+.+.+|..++..++|||+|++||+-.+.+
T Consensus 1230 lsnV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRe-- 1307 (1509)
T KOG4645|consen 1230 LSNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHRE-- 1307 (1509)
T ss_pred hccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHH--
Confidence 34455678889999999999999999999999999999875432 33467889999999999999999999965554
Q ss_pred CCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEE
Q 040925 604 GTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683 (833)
Q Consensus 604 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 683 (833)
..+|.||||++|+|.+.+...+ ..++.....+..|++.|++|||++ |||||||||+||+++.+|.+|+
T Consensus 1308 ---kv~IFMEyC~~GsLa~ll~~gr------i~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~ 1375 (1509)
T KOG4645|consen 1308 ---KVYIFMEYCEGGSLASLLEHGR------IEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKY 1375 (1509)
T ss_pred ---HHHHHHHHhccCcHHHHHHhcc------hhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEe
Confidence 7899999999999999998765 567888888999999999999999 9999999999999999999999
Q ss_pred cccccccccCcccccccccCCCccccccccccccCccccCCCC---CCcccccccCCcCCCccccCCccHHHHHHHhCCC
Q 040925 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSE---ASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPE 760 (833)
Q Consensus 684 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~ 760 (833)
+|||.|..+..... ..+....+.+||+.|||||++.+.. -.-++|||| .|++..||++|..||
T Consensus 1376 ~DFGsa~ki~~~~~----~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWs----------lGCVVlEM~tGkrPW 1441 (1509)
T KOG4645|consen 1376 GDFGSAVKIKNNAQ----TMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWS----------LGCVVLEMATGKRPW 1441 (1509)
T ss_pred ecccceeEecCchh----cCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhc----------ccceEEEeecCCCch
Confidence 99999998876521 1223445678999999999987643 456789999 666777888888887
Q ss_pred cccccccccch--hhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 761 KVMEIVDPSLL--MEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 761 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
... |..+. ..+..... ...++....+-.+++..|++.||++|+++.|+++.
T Consensus 1442 ~~~---dne~aIMy~V~~gh~------Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1442 AEL---DNEWAIMYHVAAGHK------PQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred hhc---cchhHHHhHHhccCC------CCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 632 22222 22211111 11223355667789999999999999999988765
No 257
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.6e-33 Score=303.09 Aligned_cols=256 Identities=20% Similarity=0.242 Sum_probs=194.6
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeecc---CCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK---YKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
++|++.+.||+|+||.||+|+...+++.||+|++... .......+.+|+.++..++|++|+++++++...+ .
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-----~ 75 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDEN-----N 75 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC-----E
Confidence 4799999999999999999999999999999998632 1223345788999999999999999999876554 8
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.++||||+++|+|.+++..... .+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~ey~~~g~L~~~l~~~~~-----~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG 147 (332)
T cd05623 76 LYLVMDYYVGGDLLTLLSKFED-----RLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFG 147 (332)
T ss_pred EEEEEeccCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecc
Confidence 9999999999999999976432 588999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccC-----CCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGM-----GSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKV 762 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~ 762 (833)
++........ .......||+.|+|||++. ...++.++|||| +|+++++++++..|+..
T Consensus 148 ~a~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwS----------lGvil~ell~g~~Pf~~ 210 (332)
T cd05623 148 SCLKLMEDGT-------VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWS----------LGVCMYEMLYGETPFYA 210 (332)
T ss_pred hheecccCCc-------ceecccccCccccCHHHHhccccCCCCCCCcCCEEe----------eHHHHHHHhcCCCCCCC
Confidence 9875432211 0111246999999999875 346889999999 88899999999988753
Q ss_pred cccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCC--CCCHHHHHHH
Q 040925 763 MEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFE--RMDMRDVVAK 820 (833)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~eil~~ 820 (833)
.+.... ............ .......+++.+.+++.+|+..+|++ |++++|+++.
T Consensus 211 ~~~~~~--~~~i~~~~~~~~--~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 211 ESLVET--YGKIMNHKERFQ--FPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred CCHHHH--HHHHhCCCcccc--CCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 321111 011111100000 00111234567788888888654444 7899999876
No 258
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-34 Score=271.83 Aligned_cols=252 Identities=19% Similarity=0.273 Sum_probs=194.8
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccC-CcchhHHHHHHHHHhhcC-CCccceEeeEeecCCCCCCceEe
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY-KGASRSFVAECEALRNIR-HRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
+.+.+..||+|+.|+||+++.+.+|...|||.++... .+..+++...++++..-+ +|+||+.+|||..+. .++
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~-----dV~ 167 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNT-----DVF 167 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCc-----hHH
Confidence 4455678999999999999999999999999997543 344567778888776664 899999999987665 788
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+.||.|.. -.+.+++.... ++++..+-++..-+++||.||.+++ +|+|||+||+|||+|+.|.+|+||||++
T Consensus 168 IcMelMs~-C~ekLlkrik~-----piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIs 239 (391)
T KOG0983|consen 168 ICMELMST-CAEKLLKRIKG-----PIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGIS 239 (391)
T ss_pred HHHHHHHH-HHHHHHHHhcC-----CchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeeccccc
Confidence 99999853 45555554432 6899999999999999999999987 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCC---CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG---SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIV 766 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~ 766 (833)
..+.+... ....+|.+.|||||.+.- ..|+.++|||| +|++++|++++.+|+..-+ .
T Consensus 240 GrlvdSkA---------htrsAGC~~YMaPERidp~~~~kYDiRaDVWS----------lGITlveLaTg~yPy~~c~-t 299 (391)
T KOG0983|consen 240 GRLVDSKA---------HTRSAGCAAYMAPERIDPPDKPKYDIRADVWS----------LGITLVELATGQYPYKGCK-T 299 (391)
T ss_pred ceeecccc---------cccccCCccccCccccCCCCCCccchhhhhhh----------hccchhhhhcccCCCCCCC-c
Confidence 87655332 122469999999997653 46899999999 8999999999999986321 1
Q ss_pred cccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 767 DPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
|-+....+.... +..-.....+++.+.+++..|+.+|+.+||...+++++
T Consensus 300 dFe~ltkvln~e----PP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 300 DFEVLTKVLNEE----PPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred cHHHHHHHHhcC----CCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 111111111111 11111112267789999999999999999999999875
No 259
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=2.3e-33 Score=291.55 Aligned_cols=255 Identities=23% Similarity=0.425 Sum_probs=198.5
Q ss_pred HhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceE
Q 040925 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 529 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
..++|++.+.||+|+||.||+|... .+..||+|.++.. ....+.+.+|++++++++|+||+++++++.. ...
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------~~~ 75 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK------EPI 75 (260)
T ss_pred cccceeEEeEecCccceEEEEEEec-CCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC------CCe
Confidence 3468999999999999999999876 5567999988643 2234678899999999999999999998654 267
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
+++|||+++|+|.+++...... .+++.+++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||.
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~----~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~ 148 (260)
T cd05073 76 YIITEFMAKGSLLDFLKSDEGS----KQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGL 148 (260)
T ss_pred EEEEEeCCCCcHHHHHHhCCcc----ccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcc
Confidence 9999999999999999764322 578899999999999999999999 999999999999999999999999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCccccccc
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEIVD 767 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~~~ 767 (833)
+......... ......++..|+|||++.+..++.++|+|| +|+.++++++ +..|+.... +
T Consensus 149 ~~~~~~~~~~-------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s----------lG~~l~~l~t~g~~p~~~~~--~ 209 (260)
T cd05073 149 ARVIEDNEYT-------AREGAKFPIKWTAPEAINFGSFTIKSDVWS----------FGILLMEIVTYGRIPYPGMS--N 209 (260)
T ss_pred eeeccCCCcc-------cccCCcccccccCHhHhccCCcCccccchH----------HHHHHHHHHhcCCCCCCCCC--H
Confidence 9765432111 111223667899999998888999999999 7888888887 676654221 1
Q ss_pred ccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 040925 768 PSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCH 823 (833)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 823 (833)
+... ........ .......+..+.+++.+||+.+|++||++.++.+.|+.
T Consensus 210 ~~~~-~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 210 PEVI-RALERGYR-----MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred HHHH-HHHhCCCC-----CCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 1111 11111110 01122345678999999999999999999999998874
No 260
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.2e-33 Score=294.09 Aligned_cols=250 Identities=25% Similarity=0.318 Sum_probs=201.4
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC-CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY-KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
++|++.+.||.|++|.||+|.+..+++.||+|.+.... ......+.+|+++++.++||||+++++++.... ..+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 75 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGS-----KLW 75 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECC-----eEE
Confidence 46889999999999999999999899999999987543 333467889999999999999999999876544 899
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+|+||+++++|.+++... .+++..++.++.|++.|+.|||+. +++||||+|+||++++++.++|+|||.+
T Consensus 76 ~v~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~ 145 (274)
T cd06609 76 IIMEYCGGGSCLDLLKPG-------KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVS 145 (274)
T ss_pred EEEEeeCCCcHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccc
Confidence 999999999999998754 588999999999999999999999 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPS 769 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~ 769 (833)
+....... ......|++.|+|||++.+..++.++|||| +|++++++.++..|+...+. .
T Consensus 146 ~~~~~~~~--------~~~~~~~~~~y~~PE~~~~~~~~~~sDv~s----------lG~il~~l~tg~~p~~~~~~---~ 204 (274)
T cd06609 146 GQLTSTMS--------KRNTFVGTPFWMAPEVIKQSGYDEKADIWS----------LGITAIELAKGEPPLSDLHP---M 204 (274)
T ss_pred eeeccccc--------ccccccCCccccChhhhccCCCCchhhHHH----------HHHHHHHHHhCCCCcccCch---H
Confidence 87654321 112245889999999999888999999999 88889999998888753221 1
Q ss_pred chhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 770 LLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.......... ........++..+.+++.+||..||++|||++++++.
T Consensus 205 ~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 205 RVLFLIPKNN----PPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred HHHHHhhhcC----CCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 1100011100 0000111146678899999999999999999999764
No 261
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.8e-33 Score=296.75 Aligned_cols=255 Identities=19% Similarity=0.282 Sum_probs=197.8
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
++|++.+.||+|+||.||+|.+..+++.||+|.++.... .....+.+|+.++++++||||+++++++.... ..+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-----~~~ 75 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEG-----AVY 75 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCC-----eEE
Confidence 368899999999999999999998999999999875422 23467889999999999999999999866544 899
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||+++++|.+++..... ...+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||+|||.+
T Consensus 76 lv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~ 150 (286)
T cd06622 76 MCMEYMDAGSLDKLYAGGVA---TEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVS 150 (286)
T ss_pred EEEeecCCCCHHHHHHhccc---cCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCc
Confidence 99999999999999876421 125899999999999999999999632 8999999999999999999999999998
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCC------CCCcccccccCCcCCCccccCCccHHHHHHHhCCCccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS------EASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVM 763 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~ 763 (833)
........ ....|++.|+|||++.+. .++.++|||| .|+++++++++..|+...
T Consensus 151 ~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Diws----------lG~il~~l~~g~~pf~~~ 210 (286)
T cd06622 151 GNLVASLA----------KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWS----------LGLSILEMALGRYPYPPE 210 (286)
T ss_pred ccccCCcc----------ccCCCccCccCcchhcCCCCCccCCCCcccchHh----------HHHHHHHHHhCCCCCCCc
Confidence 76533211 123488899999987554 3578899999 888899999998887532
Q ss_pred ccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 764 EIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
... ..... .... ........+.+++..+.+++.+||..+|++||+++++++.
T Consensus 211 ~~~--~~~~~-~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 211 TYA--NIFAQ-LSAI--VDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred chh--hHHHH-HHHH--hhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 111 10000 0000 0000111223467788999999999999999999999875
No 262
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=4.1e-33 Score=298.70 Aligned_cols=202 Identities=24% Similarity=0.318 Sum_probs=158.4
Q ss_pred CceeccCcceEEEEEEEC--CCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEEE
Q 040925 536 SNMIGQGSFGYVYKGTLG--EDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFE 613 (833)
Q Consensus 536 ~~~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 613 (833)
.++||+|+||.||+|++. .+++.||+|.++.. .....+.+|++++++++||||+++++++.... ....++|||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHA---DRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCC--CCcHHHHHHHHHHHhcCCCCCcceeeeEecCC---CcEEEEEEe
Confidence 368999999999999975 36788999998633 23456788999999999999999999875432 347899999
Q ss_pred ecCCCChhhhhccCCCc---cccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeee----cCCCcEEEccc
Q 040925 614 YMENGSLKDWLHQSDDQ---VEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLL----DHDMVAHVCDF 686 (833)
Q Consensus 614 ~~~~gsL~~~l~~~~~~---~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kL~Df 686 (833)
|++ ++|.+++...... .....+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+||
T Consensus 81 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07868 81 YAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred ccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeec
Confidence 996 5898887643211 1112588999999999999999999999 99999999999999 45679999999
Q ss_pred ccccccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCc
Q 040925 687 GLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEK 761 (833)
Q Consensus 687 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~ 761 (833)
|+|+........ ........||+.|+|||++.+ ..++.++|||| .|+++++++++..|+.
T Consensus 157 G~a~~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diws----------lG~il~el~~g~~~f~ 217 (317)
T cd07868 157 GFARLFNSPLKP-----LADLDPVVVTFWYRAPELLLGARHYTKAIDIWA----------IGCIFAELLTSEPIFH 217 (317)
T ss_pred CceeccCCCCcc-----ccccCCccccccccCCHHHcCCCCcCchhhHHH----------HHHHHHHHHhCCCCcc
Confidence 999866432211 111223568999999999876 45899999999 6777777777776654
No 263
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=2.7e-33 Score=295.64 Aligned_cols=257 Identities=22% Similarity=0.317 Sum_probs=195.3
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC--cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceE
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
++|++.+.||+|++|.||+|++..+++.||+|++..... ...+.+.+|+.++++++||||+++++++.... ..
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~ 75 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKR-----KL 75 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCC-----EE
Confidence 468999999999999999999998899999999864322 23356789999999999999999999976544 88
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
++||||++++++..++.... .+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||+
T Consensus 76 ~~v~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~ 146 (286)
T cd07847 76 HLVFEYCDHTVLNELEKNPR------GVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGF 146 (286)
T ss_pred EEEEeccCccHHHHHHhCCC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECcccc
Confidence 99999999988888776543 589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD 767 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~ 767 (833)
+........ ......++..|+|||++.+ ..++.++|||| +|+++++++++..|+......+
T Consensus 147 ~~~~~~~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s----------lG~i~~~l~~g~~p~~~~~~~~ 208 (286)
T cd07847 147 ARILTGPGD--------DYTDYVATRWYRAPELLVGDTQYGPPVDVWA----------IGCVFAELLTGQPLWPGKSDVD 208 (286)
T ss_pred ceecCCCcc--------cccCcccccccCCHHHHhCCCCcCchhhhHH----------HHHHHHHHHhCCCCCCCCChHH
Confidence 986644221 1112357899999998776 45788999999 7777888888877654211111
Q ss_pred ccchhh------------------hccccchhhhh----hhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 768 PSLLME------------------VMTNNSMIQED----KRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 768 ~~~~~~------------------~~~~~~~~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
...... .........+. .....+..+..+.+++.+||..||++|||+.|++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 209 QLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred HHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 000000 00000000000 00111234567889999999999999999999875
No 264
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=2.5e-33 Score=290.84 Aligned_cols=251 Identities=24% Similarity=0.337 Sum_probs=194.3
Q ss_pred ceeccCcceEEEEEEECC-C--ceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEE
Q 040925 537 NMIGQGSFGYVYKGTLGE-D--EMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVF 612 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~-~--~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 612 (833)
+.||+|++|.||+|.+.. . ...||+|.++.... ...+.+.+|++++++++||||+++++++.. ...++||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~~~~v~ 74 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT------HPLMMVT 74 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC------CeEEEEE
Confidence 468999999999999854 2 33699999976544 456789999999999999999999998654 3789999
Q ss_pred EecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccccc
Q 040925 613 EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL 692 (833)
Q Consensus 613 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 692 (833)
||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++..
T Consensus 75 e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~ 147 (257)
T cd05040 75 ELAPLGSLLDRLRKDAL----GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRAL 147 (257)
T ss_pred EecCCCcHHHHHHhccc----ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccc
Confidence 99999999999987542 1689999999999999999999999 9999999999999999999999999999876
Q ss_pred CcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCcccccccccch
Q 040925 693 SDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEIVDPSLL 771 (833)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~~~~~~~ 771 (833)
........ ......++..|+|||++.+..++.++|||| +|++++++++ +..|+......+ ..
T Consensus 148 ~~~~~~~~-----~~~~~~~~~~y~~pE~~~~~~~~~~~Di~s----------lG~~l~el~t~g~~p~~~~~~~~--~~ 210 (257)
T cd05040 148 PQNEDHYV-----MEEHLKVPFAWCAPESLRTRTFSHASDVWM----------FGVTLWEMFTYGEEPWAGLSGSQ--IL 210 (257)
T ss_pred ccccccee-----cccCCCCCceecCHHHhcccCcCchhhhHH----------HHHHHHHHHhCCCCCCCCCCHHH--HH
Confidence 44221100 011235788999999998889999999999 6777778776 666653211111 10
Q ss_pred hhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 040925 772 MEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLC 822 (833)
Q Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 822 (833)
...... ......+...+..+.+++.+||..+|++|||+.++++.|.
T Consensus 211 ~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 211 KKIDKE-----GERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred HHHHhc-----CCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 000000 0011112335678899999999999999999999999875
No 265
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=2.7e-33 Score=292.51 Aligned_cols=256 Identities=19% Similarity=0.305 Sum_probs=200.6
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC------cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCC
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK------GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGT 605 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 605 (833)
+|+..+.||+|++|.||+|....+++.||+|+++.... ...+.+.+|++++++++||||+++++++.+.+
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~---- 76 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDS---- 76 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCC----
Confidence 48888999999999999999988999999999974321 12467889999999999999999999975544
Q ss_pred ceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCC-cEEEc
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVC 684 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kL~ 684 (833)
..++||||+++++|.+++.... ++++..+..++.|++.||+|||+. +++|+||||+||+++.++ .+||+
T Consensus 77 -~~~~v~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~ 146 (268)
T cd06630 77 -HFNLFVEWMAGGSVSHLLSKYG------AFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIA 146 (268)
T ss_pred -eEEEEEeccCCCcHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEc
Confidence 8899999999999999997654 688999999999999999999999 999999999999998776 69999
Q ss_pred ccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccc
Q 040925 685 DFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVME 764 (833)
Q Consensus 685 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~ 764 (833)
|||.+.......... ........||..|+|||++.+..++.++|+|+ .|+++++++++..|+...+
T Consensus 147 dfg~~~~~~~~~~~~----~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~s----------lG~~l~~l~~g~~p~~~~~ 212 (268)
T cd06630 147 DFGAAARLAAKGTGA----GEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWS----------VGCVIIEMATAKPPWNAEK 212 (268)
T ss_pred ccccccccccccccC----CccccccccccceeCHhHhccCCCCcccchHH----------HHHHHHHHHhCCCCCCCCC
Confidence 999998765432111 11122346899999999998888999999999 7888888888888865322
Q ss_pred cccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 765 IVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
............. .......+....+.+.+++.+||..+|++|||+.|+++
T Consensus 213 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 213 HSNHLALIFKIAS----ATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred CcchHHHHHHHhc----cCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 2111111000000 00011223345678899999999999999999999975
No 266
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.2e-33 Score=310.76 Aligned_cols=255 Identities=21% Similarity=0.227 Sum_probs=191.8
Q ss_pred hcCCccCceeccCcceEEEEEEECC--CceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGE--DEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
..+|++.+.||+|+||.||+|...+ +++.||+|.+... +...+|++++++++||||+++++++.... .
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~-----~ 160 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKS-----T 160 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCC-----E
Confidence 3579999999999999999997643 4678999988532 34568999999999999999999865444 8
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.|+||||+. ++|.+++.... .+++.+++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||
T Consensus 161 ~~lv~e~~~-~~l~~~l~~~~------~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG 230 (392)
T PHA03207 161 VCMVMPKYK-CDLFTYVDRSG------PLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFG 230 (392)
T ss_pred EEEEehhcC-CCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCc
Confidence 999999996 68999885433 689999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD 767 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~ 767 (833)
+++........ .......||+.|+|||++.+..++.++|||| +|+++|+++++..|+.......
T Consensus 231 ~a~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dvws----------lGvil~el~~g~~pf~~~~~~~ 294 (392)
T PHA03207 231 AACKLDAHPDT------PQCYGWSGTLETNSPELLALDPYCAKTDIWS----------AGLVLFEMSVKNVTLFGKQVKS 294 (392)
T ss_pred cccccCccccc------ccccccccccCccCHhHhcCCCCCchhhHHH----------HHHHHHHHHHCCCCCCCCCCCC
Confidence 99765442211 1122356999999999999999999999999 7777888888777764211100
Q ss_pred c-cchhhhc-----------------------cccchhhh----hhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 768 P-SLLMEVM-----------------------TNNSMIQE----DKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 768 ~-~~~~~~~-----------------------~~~~~~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
. ....... .......+ ............+.+++.+||..||++|||+.|++.
T Consensus 295 ~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~ 374 (392)
T PHA03207 295 SSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILS 374 (392)
T ss_pred cHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhh
Confidence 0 0000000 00000000 000000122456788999999999999999999987
Q ss_pred H
Q 040925 820 K 820 (833)
Q Consensus 820 ~ 820 (833)
.
T Consensus 375 ~ 375 (392)
T PHA03207 375 L 375 (392)
T ss_pred C
Confidence 6
No 267
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=2.5e-33 Score=292.76 Aligned_cols=257 Identities=20% Similarity=0.300 Sum_probs=185.2
Q ss_pred ceeccCcceEEEEEEEC--CCceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEEE
Q 040925 537 NMIGQGSFGYVYKGTLG--EDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFE 613 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 613 (833)
+.||+|+||.||+|... .++..+|+|.++.... .....+.+|+.++++++||||+++++++.+.. ..++|||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~e 75 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVT-----PYLLVME 75 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC-----CcEEEEE
Confidence 36899999999999864 3456799999875432 23357888999999999999999999876544 6899999
Q ss_pred ecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccC
Q 040925 614 YMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLS 693 (833)
Q Consensus 614 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 693 (833)
|+++|+|.+++...... .....++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++...
T Consensus 76 ~~~~g~L~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~ 151 (269)
T cd05087 76 FCPLGDLKGYLRSCRKA-ELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKY 151 (269)
T ss_pred CCCCCcHHHHHHHhhhc-ccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCcccccccc
Confidence 99999999999754321 112456778889999999999999999 99999999999999999999999999987543
Q ss_pred cccccccccCCCccccccccccccCccccCCC-------CCCcccccccCCcCCCccccCCccHHHHHH-HhCCCccccc
Q 040925 694 DHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS-------EASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEI 765 (833)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~ 765 (833)
...... ......|++.|+|||++.+. .++.++|||| +|++++++++ +..|+.....
T Consensus 152 ~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Diws----------lG~~l~el~~~g~~p~~~~~~ 215 (269)
T cd05087 152 KEDYYV------TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWS----------LGVTIWELFELGSQPYRHLSD 215 (269)
T ss_pred Ccceee------cCCCcCCcccccCHhHhccccccccccCCCccchhHH----------HHHHHHHHHhCCCCCCCCCCh
Confidence 322110 11224578899999987542 3578999999 7777888775 7767642211
Q ss_pred ccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 040925 766 VDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLC 822 (833)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 822 (833)
.+ .............+ ........++.+.+++..|| .+|++|||++||+..|+
T Consensus 216 ~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 216 EQ--VLTYTVREQQLKLP-KPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred HH--HHHHHhhcccCCCC-CCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 11 00000000000000 00001123456788999999 68999999999998875
No 268
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-34 Score=290.50 Aligned_cols=248 Identities=23% Similarity=0.284 Sum_probs=203.1
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeecc---CCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCc
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK---YKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTD 606 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 606 (833)
.+.|+.-++||+|+||.||-++.+.+|+.||.|.+..+ .........+|-.++++++.+.||.+-.. |+..+
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYA-----feTkd 258 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYA-----FETKD 258 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeee-----ecCCC
Confidence 35688889999999999999999999999999988533 23344567899999999999999988766 44555
Q ss_pred eEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccc
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDF 686 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 686 (833)
..|+||..|.||+|.-+|...+.. .+++.+++.++.+|+.||++||.. +||.||+||+|||+|+.|.++|+|.
T Consensus 259 ~LClVLtlMNGGDLkfHiyn~g~~----gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDL 331 (591)
T KOG0986|consen 259 ALCLVLTLMNGGDLKFHIYNHGNP----GFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDL 331 (591)
T ss_pred ceEEEEEeecCCceeEEeeccCCC----CCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeecc
Confidence 999999999999999999988754 799999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccc-cc
Q 040925 687 GLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVM-EI 765 (833)
Q Consensus 687 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~-~~ 765 (833)
|+|..+..... ..+.+||.+|||||++.++.|+...|+|+ .|+.+|+++.|..|+... +-
T Consensus 332 GLAvei~~g~~---------~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~----------lGCllYemi~G~sPFr~~KeK 392 (591)
T KOG0986|consen 332 GLAVEIPEGKP---------IRGRVGTVGYMAPEVLQNEVYDFSPDWFS----------LGCLLYEMIAGHSPFRQRKEK 392 (591)
T ss_pred ceEEecCCCCc---------cccccCcccccCHHHHcCCcccCCccHHH----------HHhHHHHHHcccCchhhhhhh
Confidence 99998766432 22347999999999999999999999999 888999999999997632 22
Q ss_pred ccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCH
Q 040925 766 VDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDM 814 (833)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 814 (833)
+..+...... .......++.++++..+++...|.+||++|-..
T Consensus 393 vk~eEvdrr~------~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 393 VKREEVDRRT------LEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred hhHHHHHHHH------hcchhhcccccCHHHHHHHHHHHccCHHHhccC
Confidence 2111111111 111223345677788899999999999999754
No 269
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=4.6e-33 Score=290.16 Aligned_cols=255 Identities=21% Similarity=0.263 Sum_probs=197.8
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC-----cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCC
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-----GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGT 605 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 605 (833)
.+|++.+.||+|+||.||+|.+..+++.||+|.++.... ...+.+.+|++++++++||||+++++++.+.. .
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~ 78 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPM---E 78 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCC---C
Confidence 478999999999999999999998999999999864321 12357888999999999999999999865432 2
Q ss_pred ceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcc
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 685 (833)
...++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+|+||||+||+++.++.+||+|
T Consensus 79 ~~~~~v~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~D 149 (265)
T cd06652 79 RTLSIFMEHMPGGSIKDQLKSYG------ALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGD 149 (265)
T ss_pred ceEEEEEEecCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECc
Confidence 46789999999999999997654 578899999999999999999999 999999999999999999999999
Q ss_pred cccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccc
Q 040925 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEI 765 (833)
Q Consensus 686 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~ 765 (833)
||.++........ ........|+..|+|||++.+..++.++|||| +|+++++++++..|+...+.
T Consensus 150 fg~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s----------lG~il~el~~g~~p~~~~~~ 214 (265)
T cd06652 150 FGASKRLQTICLS-----GTGMKSVTGTPYWMSPEVISGEGYGRKADIWS----------VGCTVVEMLTEKPPWAEFEA 214 (265)
T ss_pred Ccccccccccccc-----ccccccCCCCccccChhhhcCCCCCcchhHHH----------HHHHHHHHhhCCCCCCccch
Confidence 9998865432111 01112345899999999998888999999999 78888999988888652211
Q ss_pred ccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 766 VDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.. ....... .+.....+......+.+++.+|+. +|++||+++|+++.
T Consensus 215 ~~--~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 215 MA--AIFKIAT-----QPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred HH--HHHHHhc-----CCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 10 0000000 001111233455678889999994 99999999999753
No 270
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=3.1e-33 Score=290.52 Aligned_cols=238 Identities=23% Similarity=0.379 Sum_probs=184.3
Q ss_pred ceeccCcceEEEEEEECCCc----------eEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCc
Q 040925 537 NMIGQGSFGYVYKGTLGEDE----------MIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTD 606 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~~----------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 606 (833)
+.||+|+||.||+|.+..++ ..|++|.++..... ...+.+|+.++++++||||+++++++.. .
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~----- 73 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-D----- 73 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-C-----
Confidence 46899999999999997666 45888887644332 6788999999999999999999999765 3
Q ss_pred eEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCC-------
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM------- 679 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~------- 679 (833)
..++||||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~ 145 (259)
T cd05037 74 ENIMVEEYVKFGPLDVFLHREKN-----NVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVP 145 (259)
T ss_pred CcEEEEEcCCCCcHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCce
Confidence 56899999999999999986542 588999999999999999999999 999999999999999888
Q ss_pred cEEEcccccccccCcccccccccCCCccccccccccccCccccCCC--CCCcccccccCCcCCCccccCCccHHHHHHH-
Q 040925 680 VAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS--EASMTGDIFTGRRPIDAVFNEGHSLHEFAKT- 756 (833)
Q Consensus 680 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~- 756 (833)
.+||+|||++....... ...++..|+|||++.+. .++.++|||| +|+++++++++
T Consensus 146 ~~kl~Dfg~a~~~~~~~------------~~~~~~~y~aPE~~~~~~~~~~~~~Di~s----------lG~~~~~l~~~~ 203 (259)
T cd05037 146 FIKLSDPGIPITVLSRE------------ERVERIPWIAPECIRNGQASLTIAADKWS----------FGTTLLEICSNG 203 (259)
T ss_pred eEEeCCCCccccccccc------------ccccCCCccChhhhcCCCCCcchhhHHHH----------HHHHHHHHHhCC
Confidence 79999999998654311 13467889999998776 7899999999 66777777663
Q ss_pred hCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 040925 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKL 821 (833)
Q Consensus 757 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 821 (833)
..|+.... +............ .... ....+.+++.+||..+|++|||+.++++.|
T Consensus 204 ~~p~~~~~---~~~~~~~~~~~~~---~~~~----~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 204 EEPLSTLS---SSEKERFYQDQHR---LPMP----DCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred CCCcccCC---chhHHHHHhcCCC---CCCC----CchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 44443221 1110010000000 0000 126788999999999999999999999876
No 271
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=3.3e-33 Score=293.18 Aligned_cols=262 Identities=21% Similarity=0.282 Sum_probs=202.8
Q ss_pred HHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhc-CCCccceEeeEeecCCC-CCC
Q 040925 528 KATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNI-RHRNLIKIITICSSTDF-KGT 605 (833)
Q Consensus 528 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~-~~~ 605 (833)
.++++|++.+.||+|++|.||+|.+..+++.||+|++..... ..+.+.+|+++++++ +||||+++++++..... ...
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 456899999999999999999999988899999999875432 346789999999999 69999999999876542 234
Q ss_pred ceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcc
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 685 (833)
...++||||+++++|.+++...... ...+++..++.++.|++.||.|||+. +++|+||+|+||++++++.+||+|
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d 156 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKK--GKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVD 156 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECC
Confidence 5789999999999999998753311 12689999999999999999999999 999999999999999999999999
Q ss_pred cccccccCcccccccccCCCccccccccccccCccccCC-----CCCCcccccccCCcCCCccccCCccHHHHHHHhCCC
Q 040925 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-----SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPE 760 (833)
Q Consensus 686 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~ 760 (833)
||++........ ......|++.|+|||++.. ..++.++|||| .|+++++++++..|+
T Consensus 157 ~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~s----------lG~il~~l~~g~~p~ 218 (275)
T cd06608 157 FGVSAQLDSTLG--------RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWS----------LGITAIELADGKPPL 218 (275)
T ss_pred Cccceecccchh--------hhcCccccccccCHhHhcccccccCCccccccHHH----------hHHHHHHHHhCCCCc
Confidence 999876543211 1122458999999998653 34678899999 888889999988887
Q ss_pred cccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 761 KVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
...... .......... .........+++.+.+++.+||..||++|||++|+++
T Consensus 219 ~~~~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 219 CDMHPM--RALFKIPRNP----PPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred cccchH--HHHHHhhccC----CCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 522111 1111111110 0011112335678899999999999999999999976
No 272
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=3.3e-33 Score=289.76 Aligned_cols=251 Identities=25% Similarity=0.403 Sum_probs=193.9
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeE
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAF 610 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 610 (833)
.+|++.+.||+|+||.||+|.+. .+..+|+|.++... .....+.+|++++++++||+++++++++.... ..++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~~ 76 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERS-----PICL 76 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCC-----ceEE
Confidence 47888999999999999999886 46789999986432 23467899999999999999999999865544 7899
Q ss_pred EEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccc
Q 040925 611 VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690 (833)
Q Consensus 611 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 690 (833)
||||+++|+|.+++..... .+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+.
T Consensus 77 v~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~ 148 (256)
T cd05112 77 VFEFMEHGCLSDYLRAQRG-----KFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTR 148 (256)
T ss_pred EEEcCCCCcHHHHHHhCcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCccee
Confidence 9999999999999875432 578999999999999999999999 99999999999999999999999999987
Q ss_pred ccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCccccccccc
Q 040925 691 FLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEIVDPS 769 (833)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~~~~~ 769 (833)
......... .....++..|+|||++.+..++.++|||| +|++++++.+ +..|+..... ..
T Consensus 149 ~~~~~~~~~-------~~~~~~~~~~~aPe~~~~~~~~~~~Dv~s----------lG~~l~el~~~g~~p~~~~~~--~~ 209 (256)
T cd05112 149 FVLDDQYTS-------STGTKFPVKWSSPEVFSFSKYSSKSDVWS----------FGVLMWEVFSEGKTPYENRSN--SE 209 (256)
T ss_pred ecccCcccc-------cCCCccchhhcCHhHhccCCcChHHHHHH----------HHHHHHHHHcCCCCCCCcCCH--HH
Confidence 654322110 11223567899999998888999999999 6777777776 5666532110 01
Q ss_pred chhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 040925 770 LLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKL 821 (833)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 821 (833)
.......... ...+...+..+.+++.+||+.+|++|||+.|++++|
T Consensus 210 ~~~~~~~~~~------~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 210 VVETINAGFR------LYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred HHHHHhCCCC------CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 1111000000 000111356789999999999999999999999886
No 273
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=2.8e-33 Score=293.61 Aligned_cols=260 Identities=21% Similarity=0.342 Sum_probs=197.1
Q ss_pred cCCccCceeccCcceEEEEEEECC-----CceEEEEEEeeccCCc-chhHHHHHHHHHhhcCCCccceEeeEeecCCCCC
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGE-----DEMIVAVKVINLKYKG-ASRSFVAECEALRNIRHRNLIKIITICSSTDFKG 604 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 604 (833)
.+|++.+.||+|+||.||+|+.+. +.+.||+|.+...... ..+.+.+|++++++++||||+++++++...+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--- 81 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE--- 81 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC---
Confidence 578999999999999999999753 3567999988654333 3467999999999999999999999975544
Q ss_pred CceEeEEEEecCCCChhhhhccCCCcc---ccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcE
Q 040925 605 TDFKAFVFEYMENGSLKDWLHQSDDQV---EVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVA 681 (833)
Q Consensus 605 ~~~~~lv~e~~~~gsL~~~l~~~~~~~---~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 681 (833)
..++||||+++|+|.+++....... ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 82 --~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~ 156 (275)
T cd05046 82 --PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREV 156 (275)
T ss_pred --cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcE
Confidence 7899999999999999997654211 011589999999999999999999999 99999999999999999999
Q ss_pred EEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCC
Q 040925 682 HVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPE 760 (833)
Q Consensus 682 kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~ 760 (833)
+++|||++........ .......+++.|+|||.+.+..++.++|||| +|++++++++ +..|+
T Consensus 157 ~l~~~~~~~~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s----------lG~~l~~l~~~~~~p~ 219 (275)
T cd05046 157 KVSLLSLSKDVYNSEY-------YKLRNALIPLRWLAPEAVQEDDFSTKSDVWS----------FGVLMWEVFTQGELPF 219 (275)
T ss_pred EEcccccccccCcccc-------cccCCceeEEeecChhhhccCCCCchhhHHH----------HHHHHHHHHhCCCCCc
Confidence 9999999875432211 1112235678899999988888999999999 6666777665 44454
Q ss_pred cccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 040925 761 KVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLC 822 (833)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 822 (833)
... .+............ .......++..+.+++.+||+.||++|||+.|+++.|.
T Consensus 220 ~~~--~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 220 YGL--SDEEVLNRLQAGKL-----ELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred ccc--chHHHHHHHHcCCc-----CCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 311 11111111110000 00112235668899999999999999999999999875
No 274
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=2.7e-33 Score=290.33 Aligned_cols=251 Identities=20% Similarity=0.267 Sum_probs=199.8
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccC--CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
+|++.+.||+|+||.||+++...+++.||+|.+.... ....+.+.+|++++++++||||+++++++... +..+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 75 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEEN-----GNLY 75 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCC-----CeEE
Confidence 5889999999999999999999899999999986432 23346789999999999999999999986544 4899
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||+++++|.+++...... .+++.+++.++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.+
T Consensus 76 lv~e~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~ 148 (256)
T cd08218 76 IVMDYCEGGDLYKKINAQRGV----LFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIA 148 (256)
T ss_pred EEEecCCCCcHHHHHHhccCC----CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccce
Confidence 999999999999998764322 578999999999999999999999 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPS 769 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~ 769 (833)
......... .....|++.|+|||+..+..++.++|+|| +|+.++++.++..|+...+.. .
T Consensus 149 ~~~~~~~~~--------~~~~~~~~~~~~pe~~~~~~~~~~~Dv~s----------lG~i~~~l~~g~~~~~~~~~~--~ 208 (256)
T cd08218 149 RVLNSTVEL--------ARTCIGTPYYLSPEICENRPYNNKSDIWA----------LGCVLYEMCTLKHAFEAGNMK--N 208 (256)
T ss_pred eecCcchhh--------hhhccCCccccCHHHhCCCCCCCccchhH----------HHHHHHHHHcCCCCccCCCHH--H
Confidence 765432211 11235889999999998888999999999 788888888887776432211 1
Q ss_pred chhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 770 LLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.......... ...+..++..+.+++.+||+.+|++||++++|++.
T Consensus 209 ~~~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 209 LVLKIIRGSY------PPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred HHHHHhcCCC------CCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 1111111110 11123346678999999999999999999999874
No 275
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=2.4e-33 Score=293.15 Aligned_cols=255 Identities=25% Similarity=0.394 Sum_probs=193.8
Q ss_pred ceeccCcceEEEEEEECCCc------eEEEEEEeeccC-CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 537 NMIGQGSFGYVYKGTLGEDE------MIVAVKVINLKY-KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~~------~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
+.||+|+||.||+|+..+.. +.||+|.+.... ......+.+|+.+++.++||||+++++++...+ ..+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 75 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNE-----PQY 75 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCC-----CeE
Confidence 46899999999999986433 689999886443 234567889999999999999999999975544 789
Q ss_pred EEEEecCCCChhhhhccCCCcc-ccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCC-----cEEE
Q 040925 610 FVFEYMENGSLKDWLHQSDDQV-EVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM-----VAHV 683 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~-~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~-----~~kL 683 (833)
+||||+++|+|.+++....... ....+++.+++.++.|++.|++|||+. +++|+||||+||+++.++ .+|+
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l 152 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKI 152 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEE
Confidence 9999999999999997543211 122578999999999999999999999 999999999999999877 8999
Q ss_pred cccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCcc
Q 040925 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKV 762 (833)
Q Consensus 684 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~ 762 (833)
+|||+++......... ......++..|+|||++.+..++.++|||| +|++++++++ +..|+..
T Consensus 153 ~dfg~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s----------lG~il~ellt~g~~p~~~ 216 (269)
T cd05044 153 GDFGLARDIYKSDYYR------KEGEGLLPVRWMAPESLLDGKFTTQSDVWS----------FGVLMWEILTLGQQPYPA 216 (269)
T ss_pred CCcccccccccccccc------cCcccCCCccccCHHHHccCCcccchhHHH----------HHHHHHHHHHcCCCCCcc
Confidence 9999997654322111 011224678899999999999999999999 7888888887 6666542
Q ss_pred cccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 040925 763 MEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCH 823 (833)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 823 (833)
... ...... ..... ....+..++..+.+++.+||..+|++||+++++++.|++
T Consensus 217 ~~~--~~~~~~-~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 217 LNN--QEVLQH-VTAGG-----RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred cCH--HHHHHH-HhcCC-----ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 211 111111 00000 011123456788999999999999999999999998863
No 276
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=3.9e-33 Score=289.20 Aligned_cols=250 Identities=23% Similarity=0.387 Sum_probs=198.2
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccC--CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
+|++.+.||+|++|.||+|....+++.||+|.+.... ....+.+.+|++++++++||||+++++.+... ...+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~~~ 75 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLED-----KALM 75 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecC-----CEEE
Confidence 5889999999999999999999899999999986442 23356788999999999999999999986544 4899
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCC-CcEEEccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHD-MVAHVCDFGL 688 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kL~DfG~ 688 (833)
+||||+++++|.+++...... .+++..++.++.|+++|++|||+. +++||||||+||+++.+ +.+||+|||.
T Consensus 76 lv~e~~~~~~L~~~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~ 148 (256)
T cd08220 76 IVMEYAPGGTLAEYIQKRCNS----LLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGI 148 (256)
T ss_pred EEEecCCCCCHHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCC
Confidence 999999999999999765422 589999999999999999999999 99999999999999865 4689999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccc
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDP 768 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~ 768 (833)
+........ .....|++.|+|||.+.+..++.++|||| +|+.++++.++..|+...+. +
T Consensus 149 ~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s----------lG~~l~~l~~~~~~~~~~~~--~ 207 (256)
T cd08220 149 SKILSSKSK---------AYTVVGTPCYISPELCEGKPYNQKSDIWA----------LGCVLYELASLKRAFEAANL--P 207 (256)
T ss_pred ceecCCCcc---------ccccccCCcccCchhccCCCCCcccchHH----------HHHHHHHHHhCCCCcccCch--H
Confidence 986643221 11245899999999999888999999999 78888888888777643221 1
Q ss_pred cchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 769 SLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.......... ....+..++..+.+++.+||..||++|||++|+++.
T Consensus 208 ~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 208 ALVLKIMSGT------FAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred HHHHHHHhcC------CCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 1111111110 011122356678999999999999999999999863
No 277
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=4e-33 Score=288.19 Aligned_cols=248 Identities=25% Similarity=0.378 Sum_probs=192.6
Q ss_pred ceeccCcceEEEEEEECCCceEEEEEEeeccCCc-chhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEEEec
Q 040925 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG-ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYM 615 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 615 (833)
++||+|++|.||+|.+.. ++.||+|.++..... ....+.+|++++++++||||+++++++.... ..++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~~v~e~~ 74 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQ-----PIYIVMELV 74 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCC-----CeEEEEEcC
Confidence 479999999999999986 999999998754333 4567899999999999999999999976554 789999999
Q ss_pred CCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccCcc
Q 040925 616 ENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDH 695 (833)
Q Consensus 616 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 695 (833)
++++|.+++..... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+......
T Consensus 75 ~~~~l~~~l~~~~~-----~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 146 (251)
T cd05041 75 PGGSLLTFLRKKKN-----RLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGG 146 (251)
T ss_pred CCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCC
Confidence 99999999965432 578999999999999999999999 9999999999999999999999999999765422
Q ss_pred cccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCcccccccccchhhh
Q 040925 696 QLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEIVDPSLLMEV 774 (833)
Q Consensus 696 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~~~~~~~~~~ 774 (833)
..... .....++..|+|||++.+..++.++|||| +|++++++++ +..|+......+ . ...
T Consensus 147 ~~~~~------~~~~~~~~~y~~PE~~~~~~~~~~~Di~s----------lG~i~~~l~t~~~~p~~~~~~~~--~-~~~ 207 (251)
T cd05041 147 IYTVS------DGLKQIPIKWTAPEALNYGRYTSESDVWS----------YGILLWETFSLGDTPYPGMSNQQ--T-RER 207 (251)
T ss_pred cceec------cccCcceeccCChHhhccCCCCcchhHHH----------HHHHHHHHHhccCCCCccCCHHH--H-HHH
Confidence 11100 01122466799999998888999999999 7777888887 555553221111 0 111
Q ss_pred ccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 040925 775 MTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLC 822 (833)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 822 (833)
..... ....+..++..+.+++.+||..+|++|||++|+++.|.
T Consensus 208 ~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 208 IESGY-----RMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HhcCC-----CCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 11000 00112335668999999999999999999999999875
No 278
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=3.4e-33 Score=291.26 Aligned_cols=255 Identities=22% Similarity=0.270 Sum_probs=201.6
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccC--CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
+|++.+.||.|++|.||+|.+..+++.||+|.++... ....+.+..|++++++++||||+++++++.... ....+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~~ 77 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRS---NQTLY 77 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCC---CCEEE
Confidence 5888999999999999999999899999999986432 223456888999999999999999999765432 34689
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHh-----hcCCCCceeeCCCCCCeeecCCCcEEEc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLH-----HHCQPPMVHGDLKPSNVLLDHDMVAHVC 684 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH-----~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 684 (833)
++|||+++++|.+++...... ...+++..++.++.|++.||+||| +. +++|+||||+||+++.++.+||+
T Consensus 78 ~~~e~~~~~~L~~~l~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~ 152 (265)
T cd08217 78 IVMEYCEGGDLAQLIQKCKKE--RKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLG 152 (265)
T ss_pred EEehhccCCCHHHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEe
Confidence 999999999999999764211 126899999999999999999999 77 99999999999999999999999
Q ss_pred ccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccc
Q 040925 685 DFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVME 764 (833)
Q Consensus 685 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~ 764 (833)
|||++........ ......|++.|+|||++.+..++.++|+|| +|+++++++++..|+...+
T Consensus 153 d~g~~~~~~~~~~--------~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~s----------lG~il~~l~~g~~p~~~~~ 214 (265)
T cd08217 153 DFGLAKILGHDSS--------FAKTYVGTPYYMSPEQLNHMSYDEKSDIWS----------LGCLIYELCALSPPFTARN 214 (265)
T ss_pred cccccccccCCcc--------cccccccCCCccChhhhcCCCCCchhHHHH----------HHHHHHHHHHCCCcccCcC
Confidence 9999987644221 011245899999999998888999999999 7888889999888876332
Q ss_pred cccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 765 IVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.... .+...... ....+...+..+.+++.+|+..+|++|||+++|++.
T Consensus 215 --~~~~-~~~~~~~~-----~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 215 --QLQL-ASKIKEGK-----FRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred --HHHH-HHHHhcCC-----CCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 1111 11111110 111223456788999999999999999999999864
No 279
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.4e-33 Score=297.80 Aligned_cols=249 Identities=22% Similarity=0.299 Sum_probs=196.5
Q ss_pred CccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEE
Q 040925 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVF 612 (833)
Q Consensus 533 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 612 (833)
|.....||+|+||.||+|....++..||||.++.......+.+.+|+.+++.++||||+++++.+...+ ..++||
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~-----~~~lv~ 98 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGD-----ELWVVM 98 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCC-----eEEEEE
Confidence 444567999999999999998889999999987554455667899999999999999999999875544 889999
Q ss_pred EecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccccc
Q 040925 613 EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL 692 (833)
Q Consensus 613 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 692 (833)
||+++++|.+++... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 99 e~~~~~~L~~~~~~~-------~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~ 168 (292)
T cd06658 99 EFLEGGALTDIVTHT-------RMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQV 168 (292)
T ss_pred eCCCCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhc
Confidence 999999999988543 578999999999999999999999 9999999999999999999999999998754
Q ss_pred CcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchh
Q 040925 693 SDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLM 772 (833)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~ 772 (833)
..... ......|++.|+|||+..+..++.++|||| +|+++++++++..|+...+.... .
T Consensus 169 ~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s----------lGvil~el~~g~~p~~~~~~~~~---~ 227 (292)
T cd06658 169 SKEVP--------KRKSLVGTPYWMAPEVISRLPYGTEVDIWS----------LGIMVIEMIDGEPPYFNEPPLQA---M 227 (292)
T ss_pred ccccc--------cCceeecCccccCHHHHccCCCCchhhHHH----------HHHHHHHHHhCCCCCCCCCHHHH---H
Confidence 33211 112245899999999998888999999999 78889999998888653221110 0
Q ss_pred hhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 773 EVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
....... . .........+..+.+++.+||..||++|||++|+++.
T Consensus 228 ~~~~~~~--~-~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 228 RRIRDNL--P-PRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred HHHHhcC--C-CccccccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0000000 0 0000111245568889999999999999999999875
No 280
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=4.3e-33 Score=294.42 Aligned_cols=252 Identities=22% Similarity=0.272 Sum_probs=202.4
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
.++|.+.+.||+|+||.||+|....++..||+|.+........+.+.+|+.++++++||||+++++++.... ..+
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~-----~~~ 92 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGD-----ELW 92 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCC-----cEE
Confidence 368999999999999999999998889999999987554455577899999999999999999999876544 789
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||+++++|.+++.+. .+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++
T Consensus 93 lv~e~~~~~~L~~~~~~~-------~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~ 162 (293)
T cd06647 93 VVMEYLAGGSLTDVVTET-------CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC 162 (293)
T ss_pred EEEecCCCCcHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcce
Confidence 999999999999998753 478889999999999999999999 9999999999999999999999999988
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPS 769 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~ 769 (833)
........ ......|++.|+|||.+.+..++.++|+|| +|+.++++.++..|+......+..
T Consensus 163 ~~~~~~~~--------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~s----------lG~ll~~ll~g~~pf~~~~~~~~~ 224 (293)
T cd06647 163 AQITPEQS--------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWS----------LGIMAIEMVEGEPPYLNENPLRAL 224 (293)
T ss_pred eccccccc--------ccccccCChhhcCchhhccCCCCchhhHHH----------HHHHHHHHHhCCCCCCCCChhhhe
Confidence 75543221 112245889999999998888999999999 888899999998887532211110
Q ss_pred chhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 770 LLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
. ....... .........+..+.+++.+||..+|++||++++++.+
T Consensus 225 ~--~~~~~~~----~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 225 Y--LIATNGT----PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred e--ehhcCCC----CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 0000000 0011122345678899999999999999999999876
No 281
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=3.6e-33 Score=289.03 Aligned_cols=247 Identities=28% Similarity=0.405 Sum_probs=193.8
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeE
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAF 610 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 610 (833)
++|++.+.||+|+||.||+|.. +++.||+|.++.. ...+.+.+|+.++++++||||+++++++... ..++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------~~~~ 75 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCD--VTAQAFLEETAVMTKLHHKNLVRLLGVILHN------GLYI 75 (254)
T ss_pred HHceeeeeeccCCCCceEeccc--CCCceEEEeecCc--chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC------CcEE
Confidence 5699999999999999999975 6778999998643 2346788999999999999999999987432 3689
Q ss_pred EEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccc
Q 040925 611 VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690 (833)
Q Consensus 611 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 690 (833)
||||+++|+|.+++...... .+++..++.++.|++.|+.|||+. |++||||||+||+++.++.+||+|||++.
T Consensus 76 v~e~~~~~~L~~~l~~~~~~----~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~ 148 (254)
T cd05083 76 VMELMSKGNLVNFLRTRGRA----LVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLAR 148 (254)
T ss_pred EEECCCCCCHHHHHHhcCcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccce
Confidence 99999999999999765422 588999999999999999999999 99999999999999999999999999987
Q ss_pred ccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCccccccccc
Q 040925 691 FLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEIVDPS 769 (833)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~~~~~ 769 (833)
...... .....+..|+|||++.+..++.++|+|| +|+.++++++ +..|+.......
T Consensus 149 ~~~~~~-----------~~~~~~~~y~~pe~~~~~~~~~~~Dv~s----------lG~~l~el~~~g~~p~~~~~~~~-- 205 (254)
T cd05083 149 VGSMGV-----------DNSKLPVKWTAPEALKHKKFSSKSDVWS----------YGVLLWEVFSYGRAPYPKMSLKE-- 205 (254)
T ss_pred eccccC-----------CCCCCCceecCHHHhccCCcCchhhHHH----------HHHHHHHHHhCCCCCCccCCHHH--
Confidence 543211 0123467899999998888999999999 7778888776 666654222111
Q ss_pred chhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 040925 770 LLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCH 823 (833)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 823 (833)
. .......... .....++..+.+++.+||+.+|++||+++++++.+++
T Consensus 206 ~-~~~~~~~~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 206 V-KECVEKGYRM-----EPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred H-HHHHhCCCCC-----CCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 1 1111111100 1122346778899999999999999999999998763
No 282
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4e-34 Score=301.81 Aligned_cols=255 Identities=24% Similarity=0.371 Sum_probs=200.8
Q ss_pred CCccCceeccCcceEEEEEEECC---CceEEEEEEeeccCCc-chhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGE---DEMIVAVKVINLKYKG-ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
+....+.||+|.||.|++|.|.. +...||||.++..... ..++|.+|+.+|.+|+|||++++||+..+. -
T Consensus 111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~q------p 184 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQ------P 184 (1039)
T ss_pred HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccc------h
Confidence 34456899999999999999953 3456899999866444 568999999999999999999999997553 4
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
..||||.++.|+|.+.+.+.... .+.......++.|||.|+.||.++ +.|||||..+|+++...-.|||+|||
T Consensus 185 ~mMV~ELaplGSLldrLrka~~~----~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFG 257 (1039)
T KOG0199|consen 185 AMMVFELAPLGSLLDRLRKAKKA----ILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFG 257 (1039)
T ss_pred hhHHhhhcccchHHHHHhhcccc----ceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeeccc
Confidence 78999999999999999873322 688889999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD 767 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~ 767 (833)
+.+.++...-...+. + ...-...|.|||.+....++.++|||++|+.+|+||+.|...|. |..+..+.+.+|
T Consensus 258 LmRaLg~ned~Yvm~-p----~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~---G~~g~qIL~~iD 329 (1039)
T KOG0199|consen 258 LMRALGENEDMYVMA-P----QRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWV---GCRGIQILKNID 329 (1039)
T ss_pred ceeccCCCCcceEec-C----CCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCC---CCCHHHHHHhcc
Confidence 999876543221111 1 12245679999999999999999999988888888877654332 111111222233
Q ss_pred ccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 040925 768 PSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKL 821 (833)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 821 (833)
... .-..++.|++.+.+++..||.++|++|||+..|.+.+
T Consensus 330 ~~e--------------rLpRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 330 AGE--------------RLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred ccc--------------cCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 111 1233567899999999999999999999999998553
No 283
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=5.5e-33 Score=297.55 Aligned_cols=260 Identities=22% Similarity=0.249 Sum_probs=200.8
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCc---chhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG---ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
++|++.+.||+|++|.||+|....+++.||+|.+...... ..+.+..|+++++.++||||+++++++.... .
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~ 75 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTET-----Y 75 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCC-----E
Confidence 3688999999999999999999988999999999754322 3457889999999999999999999865544 8
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.++||||+++++|.+++...... .+++..++.++.|++.||+|||+. +++||||||+||+++.++.++|+|||
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~~~----~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg 148 (316)
T cd05574 76 LCLVMDYCPGGELFRLLQRQPGK----CLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFD 148 (316)
T ss_pred EEEEEEecCCCCHHHHHHhCCCC----ccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecc
Confidence 99999999999999998764322 689999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccc---------------------cCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccC
Q 040925 688 LAKFLSDHQLDTAV---------------------KTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNE 746 (833)
Q Consensus 688 ~a~~~~~~~~~~~~---------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~ 746 (833)
++............ ..........||..|+|||++.+..++.++|||| +
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~s----------l 218 (316)
T cd05574 149 LSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWT----------L 218 (316)
T ss_pred hhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHH----------H
Confidence 98765332110000 0001112356899999999999888999999999 8
Q ss_pred CccHHHHHHHhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCC----HHHHHH
Q 040925 747 GHSLHEFAKTALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMD----MRDVVA 819 (833)
Q Consensus 747 g~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt----~~eil~ 819 (833)
|+++++++++..|+...+.. ............ .......+..+.+++.+||..||++||| ++|+++
T Consensus 219 G~ll~~l~~g~~pf~~~~~~--~~~~~~~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 219 GILLYEMLYGTTPFKGSNRD--ETFSNILKKEVT-----FPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred HHHHHHHhhCCCCCCCCchH--HHHHHHhcCCcc-----CCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 88899999998887522211 111111111110 0111124678899999999999999999 666665
No 284
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=5.4e-33 Score=288.50 Aligned_cols=252 Identities=29% Similarity=0.470 Sum_probs=196.4
Q ss_pred CccCceeccCcceEEEEEEECCCc----eEEEEEEeeccCCc-chhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 533 FSSSNMIGQGSFGYVYKGTLGEDE----MIVAVKVINLKYKG-ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 533 y~~~~~lg~G~~g~Vy~~~~~~~~----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
+++.+.||.|+||.||+|++...+ ..||+|+++..... ..+.+..|++.+++++|+||+++++++...+ .
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~ 75 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEE-----P 75 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC-----e
Confidence 456789999999999999998766 89999999755433 4678999999999999999999999976554 8
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.+++|||+++++|.+++...... .+++.+++.++.|++.|++|||+. +++||||||+||+++.++.++|+|||
T Consensus 76 ~~~i~e~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg 148 (258)
T smart00219 76 LMIVMEYMEGGDLLDYLRKNRPK----ELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFG 148 (258)
T ss_pred eEEEEeccCCCCHHHHHHhhhhc----cCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccC
Confidence 99999999999999999865421 289999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCcccccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEIV 766 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~~ 766 (833)
.+........... ....+++.|+|||...+..++.++|||| .|++++++.+ +..|+.....
T Consensus 149 ~~~~~~~~~~~~~-------~~~~~~~~y~~Pe~~~~~~~~~~~Di~s----------lG~i~~~l~~~g~~p~~~~~~- 210 (258)
T smart00219 149 LSRDLYDDDYYKK-------KGGKLPIRWMAPESLKDGKFTSKSDVWS----------FGVLLWEIFTLGESPYPGMSN- 210 (258)
T ss_pred Cceeccccccccc-------ccCCCcccccChHHhccCCCCcchhHHH----------HHHHHHHHHhCCCCCCCCCCH-
Confidence 9987654321110 0123788999999998888999999999 6777777776 4455432110
Q ss_pred cccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 040925 767 DPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKL 821 (833)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 821 (833)
............ ...+..++..+.+++.+||..||++|||+.|+++.|
T Consensus 211 -~~~~~~~~~~~~------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 211 -EEVLEYLKKGYR------LPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -HHHHHHHhcCCC------CCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 111111111110 111222567789999999999999999999998764
No 285
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=4.1e-33 Score=291.23 Aligned_cols=257 Identities=21% Similarity=0.279 Sum_probs=183.8
Q ss_pred ceeccCcceEEEEEEECC--CceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEEE
Q 040925 537 NMIGQGSFGYVYKGTLGE--DEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFE 613 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 613 (833)
+.||+|+||.||+|+... ....+|+|.+..... .....+.+|+++++.++||||+++++++.... ..++|||
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~-----~~~lv~e 75 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESI-----PYLLVLE 75 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCC-----ceEEEEE
Confidence 368999999999997532 345788988764322 23456889999999999999999999976544 7899999
Q ss_pred ecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccC
Q 040925 614 YMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLS 693 (833)
Q Consensus 614 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 693 (833)
|+++|+|.+++....... ....++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 76 ~~~~g~L~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 151 (269)
T cd05042 76 FCPLGDLKNYLRSNRGMV-AQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQY 151 (269)
T ss_pred eCCCCcHHHHHHhccccc-cccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccc
Confidence 999999999997654211 11356788899999999999999999 99999999999999999999999999987543
Q ss_pred cccccccccCCCccccccccccccCccccC-------CCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCccccc
Q 040925 694 DHQLDTAVKTPSSSIGLKGTVGYVAPEYGM-------GSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEI 765 (833)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~ 765 (833)
...... ......+++.|+|||+.. ...++.++|||| +|++++++++ +..|+.....
T Consensus 152 ~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Diws----------lG~~l~el~~~~~~p~~~~~~ 215 (269)
T cd05042 152 PEDYYI------TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWS----------LGVTMWELFTAADQPYPDLSD 215 (269)
T ss_pred cchhee------ccCCCCCcccccCHHHHhhccccccccccchhhHHHH----------HHHHHHHHHhCCCCCCCcCCH
Confidence 321100 011234678899999864 345688999999 7777888777 5555432111
Q ss_pred ccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 040925 766 VDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLC 822 (833)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 822 (833)
............. ..........+++.+.+++..|| .||++|||++||++.+.
T Consensus 216 --~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 216 --EQVLKQVVREQDI-KLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred --HHHHHHHhhccCc-cCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 1111111111000 00011112235567778889999 59999999999999874
No 286
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=6.5e-33 Score=290.29 Aligned_cols=256 Identities=21% Similarity=0.318 Sum_probs=196.6
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCc----------chhHHHHHHHHHhhcCCCccceEeeEeecCC
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG----------ASRSFVAECEALRNIRHRNLIKIITICSSTD 601 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 601 (833)
+|.+.+.||.|++|.||+|....+++.||+|.++..... ..+.+.+|+.++++++|||++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 578889999999999999999888999999998642111 1245788999999999999999999875544
Q ss_pred CCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcE
Q 040925 602 FKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVA 681 (833)
Q Consensus 602 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 681 (833)
..++||||+++|+|.+++.... .+++..+..++.|++.||.|||+. +++||||+|+||+++.++.+
T Consensus 82 -----~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~ 147 (272)
T cd06629 82 -----YLSIFLEYVPGGSIGSCLRTYG------RFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGIC 147 (272)
T ss_pred -----ceEEEEecCCCCcHHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeE
Confidence 8899999999999999997653 688999999999999999999999 99999999999999999999
Q ss_pred EEcccccccccCcccccccccCCCccccccccccccCccccCCCC--CCcccccccCCcCCCccccCCccHHHHHHHhCC
Q 040925 682 HVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSE--ASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALP 759 (833)
Q Consensus 682 kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p 759 (833)
+|+|||+++....... ........|+..|+|||++.... ++.++|+|| +|++++++.++..|
T Consensus 148 ~l~d~~~~~~~~~~~~------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~s----------lG~~l~~l~~g~~p 211 (272)
T cd06629 148 KISDFGISKKSDDIYD------NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWS----------LGCVVLEMFAGRRP 211 (272)
T ss_pred EEeecccccccccccc------ccccccccCCccccCHHHhccccCCCCccchhHH----------HHHHHHHHHhCCCC
Confidence 9999999976433211 11112345899999999877654 789999999 78888888888877
Q ss_pred CcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 760 EKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 760 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
+...+..... .+...... ..........+++..+.+++.+||..||++|||+++|++.
T Consensus 212 ~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 212 WSDEEAIAAM--FKLGNKRS-APPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred CcCcchHHHH--HHhhcccc-CCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 6422211100 00000000 0000111112356788999999999999999999999863
No 287
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=2.5e-33 Score=296.66 Aligned_cols=249 Identities=22% Similarity=0.285 Sum_probs=196.8
Q ss_pred CccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEE
Q 040925 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVF 612 (833)
Q Consensus 533 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 612 (833)
|.....||+|+||.||+|.+..+++.||+|.++.......+.+.+|+.+++.++||||+++++++...+ ..++||
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~-----~~~iv~ 97 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGE-----ELWVLM 97 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCC-----eEEEEE
Confidence 334458999999999999998889999999997655455667889999999999999999999875544 899999
Q ss_pred EecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccccc
Q 040925 613 EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL 692 (833)
Q Consensus 613 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 692 (833)
||+++++|.+++... .+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||++...
T Consensus 98 e~~~~~~L~~~~~~~-------~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~ 167 (297)
T cd06659 98 EFLQGGALTDIVSQT-------RLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQI 167 (297)
T ss_pred ecCCCCCHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhc
Confidence 999999999987643 588999999999999999999999 9999999999999999999999999998754
Q ss_pred CcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchh
Q 040925 693 SDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLM 772 (833)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~ 772 (833)
..... ......|++.|+|||++.+..++.++|||| +|+++++++++..|+........ .
T Consensus 168 ~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s----------lG~il~el~~g~~p~~~~~~~~~---~ 226 (297)
T cd06659 168 SKDVP--------KRKSLVGTPYWMAPEVISRTPYGTEVDIWS----------LGIMVIEMVDGEPPYFSDSPVQA---M 226 (297)
T ss_pred ccccc--------cccceecCccccCHHHHccCCCCchhhHHH----------HHHHHHHHHhCCCCCCCCCHHHH---H
Confidence 43211 112246899999999998888999999999 78888899998888653221110 0
Q ss_pred hhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 773 EVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
....... ..........+..+.+++.+||+.+|++||+++++++.
T Consensus 227 ~~~~~~~---~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 227 KRLRDSP---PPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred HHHhccC---CCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0000000 00001112235568899999999999999999999884
No 288
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=7.7e-33 Score=289.95 Aligned_cols=265 Identities=25% Similarity=0.374 Sum_probs=196.0
Q ss_pred CccCceeccCcceEEEEEEEC---CCceEEEEEEeeccC--CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCC-Cc
Q 040925 533 FSSSNMIGQGSFGYVYKGTLG---EDEMIVAVKVINLKY--KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKG-TD 606 (833)
Q Consensus 533 y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~-~~ 606 (833)
|++.+.||+|+||.||+|.+. .+++.||||+++... ....+.+.+|++++++++||||+++++++......+ ..
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 677889999999999999864 357899999986542 223457889999999999999999999876543111 12
Q ss_pred eEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccc
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDF 686 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 686 (833)
..++++||+++|+|.+++...........+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 3578999999999998875432211122578899999999999999999999 9999999999999999999999999
Q ss_pred ccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHH-HhCCCccccc
Q 040925 687 GLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAK-TALPEKVMEI 765 (833)
Q Consensus 687 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~-~~~p~~~~~~ 765 (833)
|+++......... ......+++.|++||...+..++.++|||| +|++++++++ +..|+...+.
T Consensus 158 g~~~~~~~~~~~~------~~~~~~~~~~~~~pe~~~~~~~~~~sDi~s----------lG~il~el~~~g~~p~~~~~~ 221 (273)
T cd05074 158 GLSKKIYSGDYYR------QGCASKLPVKWLALESLADNVYTTHSDVWA----------FGVTMWEIMTRGQTPYAGVEN 221 (273)
T ss_pred cccccccCCccee------cCCCccCchhhcCHhHHhcCccchhhhhHH----------HHHHHHHHhhCCCCCCCCCCH
Confidence 9998654322110 011224567899999998888999999999 6777777776 4455432111
Q ss_pred ccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 040925 766 VDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHT 824 (833)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i 824 (833)
. .......... ......+++..+.+++.+||..+|++|||+.|+++.|+++
T Consensus 222 ~--~~~~~~~~~~------~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 222 S--EIYNYLIKGN------RLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred H--HHHHHHHcCC------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0 1100011000 0011123456889999999999999999999999999875
No 289
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=3.3e-33 Score=291.37 Aligned_cols=255 Identities=24% Similarity=0.373 Sum_probs=200.9
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
++|+..+.||+|++|.||+|.+..+++.||+|.+..... ...+.+.+|++++++++||||+++++++.... ..+
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-----~~~ 75 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNG-----DIS 75 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCC-----EEE
Confidence 468889999999999999999998999999999875432 34467889999999999999999999976554 899
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhh-cCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH-HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
+||||+++++|.+++.... ..+++..+..++.|++.|++|+|+ . +++|+||||+||+++.++.+||+|||.
T Consensus 76 lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~ 147 (265)
T cd06605 76 ICMEYMDGGSLDKILKEVQ-----GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGV 147 (265)
T ss_pred EEEEecCCCcHHHHHHHcc-----CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 9999999999999998653 168999999999999999999999 8 999999999999999999999999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccc
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDP 768 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~ 768 (833)
+......... ...|+..|+|||++.+..++.++|||| +|++++++.++..|+........
T Consensus 148 ~~~~~~~~~~----------~~~~~~~y~~PE~~~~~~~~~~~Dv~s----------lG~~l~~l~~g~~p~~~~~~~~~ 207 (265)
T cd06605 148 SGQLVNSLAK----------TFVGTSSYMAPERIQGNDYSVKSDIWS----------LGLSLIELATGRFPYPPENDPPD 207 (265)
T ss_pred chhhHHHHhh----------cccCChhccCHHHHcCCCCCchhhHHH----------HHHHHHHHHhCCCCCCccccccc
Confidence 8765432111 145889999999999889999999999 78888888888887653211001
Q ss_pred cchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 769 SLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.. .+....... ..........++..+.+++.+||..||++|||+.|+++.
T Consensus 208 ~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 208 GI-FELLQYIVN-EPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred cH-HHHHHHHhc-CCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 00 011100000 000111111256778999999999999999999999864
No 290
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=3.5e-33 Score=294.32 Aligned_cols=256 Identities=21% Similarity=0.312 Sum_probs=190.2
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC--cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
+|++.+.||+|++|.||+|++..+|+.||+|.++.... .....+.+|++++++++||||+++++++.+. ...+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~-----~~~~ 75 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSD-----KKLT 75 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccC-----CceE
Confidence 58889999999999999999999999999999974422 2335678899999999999999999986544 4899
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||++ ++|.+++..... .+++..++.++.||++||.|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 76 lv~e~~~-~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~ 146 (284)
T cd07839 76 LVFEYCD-QDLKKYFDSCNG-----DIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLA 146 (284)
T ss_pred EEEecCC-CCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchh
Confidence 9999997 588888765332 589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCC-CCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS-EASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDP 768 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~ 768 (833)
+....... ......+++.|+|||++.+. .++.++|||| +|+++++++++..|+........
T Consensus 147 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws----------lG~il~~l~tg~~p~~~~~~~~~ 208 (284)
T cd07839 147 RAFGIPVR--------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWS----------AGCIFAELANAGRPLFPGNDVDD 208 (284)
T ss_pred hccCCCCC--------CcCCCccccCCcChHHHhCCcccCcHHHHHH----------HHHHHHHHHhcCCCCcCCCCHHH
Confidence 75533211 11123578999999987764 4789999999 67777777776666321110000
Q ss_pred cch-----------------hhhccccc----hhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 769 SLL-----------------MEVMTNNS----MIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 769 ~~~-----------------~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
... ........ .............++.+.+++.+||..||++|||++|+++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 209 QLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred HHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 000 00000000 0000000111234567889999999999999999999976
No 291
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-33 Score=248.58 Aligned_cols=195 Identities=24% Similarity=0.410 Sum_probs=166.8
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC--CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceE
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
.+|...++||+|.||+||+|+.+++++.||+|+++... ++......+|+-+++.++|+|||+++++..++. ..
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdk-----kl 76 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDK-----KL 76 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCc-----ee
Confidence 35777899999999999999999999999999998653 345678999999999999999999999865444 78
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
.+|+|||. .+|..+.....+ .++.+.++.++.|+++||.|+|++ ++.|||+||.|.+|+.+|+.|++|||+
T Consensus 77 tlvfe~cd-qdlkkyfdslng-----~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfgl 147 (292)
T KOG0662|consen 77 TLVFEFCD-QDLKKYFDSLNG-----DLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGL 147 (292)
T ss_pred EEeHHHhh-HHHHHHHHhcCC-----cCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccch
Confidence 99999996 499999887654 588999999999999999999999 999999999999999999999999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccCCCC-CCcccccccCCcCCCccccCC
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSE-ASMTGDIFTGRRPIDAVFNEG 747 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~s~~~~~~~~~~~g 747 (833)
|+.++-+... ....+-|.+|++|.++.+.+ |++..|+||.||.|.++-..|
T Consensus 148 arafgipvrc--------ysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanag 199 (292)
T KOG0662|consen 148 ARAFGIPVRC--------YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAG 199 (292)
T ss_pred hhhcCCceEe--------eeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcC
Confidence 9977654311 11235799999999999876 899999999888887665444
No 292
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=6.4e-33 Score=295.22 Aligned_cols=263 Identities=22% Similarity=0.230 Sum_probs=199.1
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC---cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK---GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
++|++.+.||+|+||.||+|.+..+++.||+|.+..... ...+.+.+|+++++.++||||+++++.+...+ .
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-----~ 75 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKR-----H 75 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCC-----E
Confidence 368999999999999999999999999999999875432 23456789999999999999999999875544 8
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.++||||+++++|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg 146 (305)
T cd05609 76 LCMVMEYVEGGDCATLLKNIG------ALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFG 146 (305)
T ss_pred EEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCC
Confidence 999999999999999997654 689999999999999999999999 99999999999999999999999999
Q ss_pred cccccCccccccc-------ccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCC
Q 040925 688 LAKFLSDHQLDTA-------VKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPE 760 (833)
Q Consensus 688 ~a~~~~~~~~~~~-------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~ 760 (833)
+++.......... ...........|+..|+|||++.+..++.++|||| +|+++++++++..|+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s----------lG~vl~el~~g~~pf 216 (305)
T cd05609 147 LSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWA----------MGIILYEFLVGCVPF 216 (305)
T ss_pred CccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHH----------HHHHHHHHHhCCCCC
Confidence 9874211100000 00001111245889999999998888999999999 788899999998886
Q ss_pred cccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 040925 761 KVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCH 823 (833)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 823 (833)
..... .............. ......++..+.+++.+||+.||++||++.++.+.++.
T Consensus 217 ~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 217 FGDTP--EELFGQVISDDIEW----PEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred CCCCH--HHHHHHHHhcccCC----CCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 42111 11111111110000 00111346678999999999999999996555555444
No 293
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=5.7e-33 Score=293.48 Aligned_cols=258 Identities=22% Similarity=0.299 Sum_probs=195.9
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC--CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceE
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
++|++.+.||+|++|.||+|.+..+++.||+|+++... ....+.+.+|++++++++|+||+++++++...+ ..
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~ 75 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKG-----RL 75 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECC-----EE
Confidence 46899999999999999999999899999999986432 233467899999999999999999999976544 89
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
++||||++++.+..+..... .+++.+++.++.|++.|++|||+. +++||||+|+||++++++.+||+|||+
T Consensus 76 ~iv~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~ 146 (288)
T cd07833 76 YLVFEYVERTLLELLEASPG------GLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGF 146 (288)
T ss_pred EEEEecCCCCHHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeec
Confidence 99999999877766554432 589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccCCC-CCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS-EASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD 767 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~ 767 (833)
+........ .......++..|+|||++.+. .++.++|||| +|++++++.++..|+......+
T Consensus 147 ~~~~~~~~~-------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~s----------lG~~l~~l~~g~~~~~~~~~~~ 209 (288)
T cd07833 147 ARALRARPA-------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWA----------IGCIMAELLDGEPLFPGDSDID 209 (288)
T ss_pred ccccCCCcc-------ccccCcccccCCcCCchhcCCCCcCchhhHHH----------HHHHHHHHHhCCCCCCCCCHHH
Confidence 986654321 011234688999999998887 7899999999 6777777777766554211110
Q ss_pred cc-----------------------chhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 768 PS-----------------------LLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 768 ~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
.. ...................+..++..+.+++.+||..+|++|||++++++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 210 QLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred HHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 00 00000000000000001112224678999999999999999999999875
No 294
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=6e-33 Score=293.23 Aligned_cols=245 Identities=23% Similarity=0.244 Sum_probs=198.7
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
++|++.+.||+|++|.||+|.+..+++.||+|+++... ....+.+.+|++++++++||||+++++++.... .
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~ 75 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDS-----N 75 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCC-----e
Confidence 36899999999999999999999899999999986432 223467889999999999999999999975544 8
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||+|+||+++.++.+||+|||
T Consensus 76 ~~~v~e~~~~~~L~~~~~~~~------~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg 146 (290)
T cd05580 76 LYLVMEYVPGGELFSHLRKSG------RFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFG 146 (290)
T ss_pred EEEEEecCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCC
Confidence 999999999999999997654 689999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD 767 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~ 767 (833)
++...... .....|++.|+|||.+.+..++.++|||| +|+++++++++..|+...+.
T Consensus 147 ~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~s----------lG~il~~l~~g~~p~~~~~~-- 203 (290)
T cd05580 147 FAKRVKGR-----------TYTLCGTPEYLAPEIILSKGYGKAVDWWA----------LGILIYEMLAGYPPFFDDNP-- 203 (290)
T ss_pred CccccCCC-----------CCCCCCCccccChhhhcCCCCCccccHHH----------HHHHHHHHHhCCCCCCCCCH--
Confidence 99865432 11245899999999998888899999999 88899999999888653221
Q ss_pred ccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCC-----CHHHHHH
Q 040925 768 PSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERM-----DMRDVVA 819 (833)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~ 819 (833)
............ ..+...+..+.+++.+||..||++|| +++|+++
T Consensus 204 ~~~~~~~~~~~~-------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 204 IQIYEKILEGKV-------RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred HHHHHHHhcCCc-------cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 111111111111 11222356788999999999999999 6777764
No 295
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1e-33 Score=317.39 Aligned_cols=268 Identities=21% Similarity=0.266 Sum_probs=189.2
Q ss_pred HHHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC-CcchhHHHHHHHHHhhcCCCccceEeeEeecCCC---
Q 040925 527 SKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY-KGASRSFVAECEALRNIRHRNLIKIITICSSTDF--- 602 (833)
Q Consensus 527 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~--- 602 (833)
.....+|+..+.||+||||.||+|+++-+|+.||||++.... ......+.+|+..+++++|||||++|..+.+...
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 456678999999999999999999999999999999997553 2334678999999999999999999876532110
Q ss_pred --------------------------------------------------------------------------------
Q 040925 603 -------------------------------------------------------------------------------- 602 (833)
Q Consensus 603 -------------------------------------------------------------------------------- 602 (833)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred --CC---------------------C--------ceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHH
Q 040925 603 --KG---------------------T--------DFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651 (833)
Q Consensus 603 --~~---------------------~--------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~g 651 (833)
++ + ...||=||||+.-++++++.+.... -.....++++++|++|
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~-----~~~d~~wrLFreIlEG 709 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN-----SQRDEAWRLFREILEG 709 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc-----hhhHHHHHHHHHHHHH
Confidence 00 0 2467889999998888888765421 1467889999999999
Q ss_pred HHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccC----------cccccccccCCCccccccccccccCccc
Q 040925 652 MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLS----------DHQLDTAVKTPSSSIGLKGTVGYVAPEY 721 (833)
Q Consensus 652 L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~----------~~~~~~~~~~~~~~~~~~gt~~y~aPE~ 721 (833)
|+|+|++ |||||||||.||+++++..|||+|||+|+... ..............++.+||.-|+|||+
T Consensus 710 LaYIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEl 786 (1351)
T KOG1035|consen 710 LAYIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPEL 786 (1351)
T ss_pred HHHHHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHH
Confidence 9999999 99999999999999999999999999998721 0000011111113356789999999999
Q ss_pred cCCCC---CCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHH
Q 040925 722 GMGSE---ASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIR 798 (833)
Q Consensus 722 ~~~~~---~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 798 (833)
+.+.. |+.|+|+|| .|++++|+... ++..+..+ ......-.... +.. .....+..+.-..
T Consensus 787 l~~~~~~~Yn~KiDmYS----------LGIVlFEM~yP-F~TsMERa---~iL~~LR~g~i--P~~-~~f~~~~~~~e~s 849 (1351)
T KOG1035|consen 787 LSDTSSNKYNSKIDMYS----------LGIVLFEMLYP-FGTSMERA---SILTNLRKGSI--PEP-ADFFDPEHPEEAS 849 (1351)
T ss_pred hcccccccccchhhhHH----------HHHHHHHHhcc-CCchHHHH---HHHHhcccCCC--CCC-cccccccchHHHH
Confidence 87655 999999999 55555555443 22111110 00000000000 000 0001112233467
Q ss_pred HhhccCCCCCCCCCCHHHHHH
Q 040925 799 TGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 799 li~~cl~~dP~~RPt~~eil~ 819 (833)
+|.+++++||++||||.|++.
T Consensus 850 lI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 850 LIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred HHHHHhcCCCccCCCHHHHhh
Confidence 899999999999999999986
No 296
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.1e-32 Score=287.38 Aligned_cols=252 Identities=25% Similarity=0.347 Sum_probs=204.1
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
++|++.+.||+|++|.||+|++..+++.||+|++..... ...+.+.+|++.+++++||||+++++++.... ..+
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~ 75 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEG-----EIS 75 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCC-----eEE
Confidence 368899999999999999999998999999999875543 34578999999999999999999999976554 899
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhh-cCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH-HCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
+||||+++++|.+++.... .+++..++.++.|+++|++|||+ . +++||||+|+||+++.++.++|+|||.
T Consensus 76 lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~ 146 (264)
T cd06623 76 IVLEYMDGGSLADLLKKVG------KIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGI 146 (264)
T ss_pred EEEEecCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCcc
Confidence 9999999999999998653 68999999999999999999999 8 999999999999999999999999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc-
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD- 767 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~- 767 (833)
+......... .....++..|+|||.+.+..++.++|+|| +|+++++++++..|+......+
T Consensus 147 ~~~~~~~~~~--------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~s----------lG~il~~l~tg~~p~~~~~~~~~ 208 (264)
T cd06623 147 SKVLENTLDQ--------CNTFVGTVTYMSPERIQGESYSYAADIWS----------LGLTLLECALGKFPFLPPGQPSF 208 (264)
T ss_pred ceecccCCCc--------ccceeecccccCHhhhCCCCCCchhhHHH----------HHHHHHHHHhCCCCCccccccCH
Confidence 9866442211 11245889999999998888999999999 8888999999888875332101
Q ss_pred ccchhhhccccchhhhhhhhchHH-HHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 768 PSLLMEVMTNNSMIQEDKRVKTEE-CLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
........... ....... ++..+.+++.+||..+|++|||+.|+++.
T Consensus 209 ~~~~~~~~~~~------~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 209 FELMQAICDGP------PPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred HHHHHHHhcCC------CCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 01111111100 0111222 56788999999999999999999999875
No 297
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=8e-33 Score=287.25 Aligned_cols=248 Identities=23% Similarity=0.337 Sum_probs=197.9
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC-----cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCc
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-----GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTD 606 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 606 (833)
+|+..+.||+|++|.||+|....+++.||+|.+..... ...+.+.+|++++++++||||+++++++....
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----- 75 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREED----- 75 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCC-----
Confidence 47888999999999999999988899999999865431 23467899999999999999999999875544
Q ss_pred eEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccc
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDF 686 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 686 (833)
..++||||+++++|.+++.... .+++..+..++.|++.|++|||+. +|+|+||+|+||+++.++.+||+||
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~ 146 (258)
T cd06632 76 NLYIFLELVPGGSLAKLLKKYG------SFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADF 146 (258)
T ss_pred eEEEEEEecCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccC
Confidence 8899999999999999997653 588999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCcccccccccCCCccccccccccccCccccCCCC-CCcccccccCCcCCCccccCCccHHHHHHHhCCCccccc
Q 040925 687 GLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSE-ASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEI 765 (833)
Q Consensus 687 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~ 765 (833)
|.+....... ......|++.|+|||.+.... ++.++|+|| +|+.+++++++..|+.....
T Consensus 147 ~~~~~~~~~~---------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~s----------lG~~l~~l~~g~~pf~~~~~ 207 (258)
T cd06632 147 GMAKQVVEFS---------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWS----------LGCTVLEMATGKPPWSQLEG 207 (258)
T ss_pred ccceeccccc---------cccccCCCcceeCHHHhcCCCCCCchhhhHH----------HHHHHHHHHhCCCCcccCcH
Confidence 9987654322 112345899999999887766 899999999 78888999998888653221
Q ss_pred ccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 766 VDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
.+... ...... .....+..+...+.+++.+||..+|++|||++++++
T Consensus 208 ~~~~~--~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 208 VAAVF--KIGRSK-----ELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred HHHHH--HHHhcc-----cCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 11111 000000 001112234567889999999999999999999975
No 298
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=3e-33 Score=295.24 Aligned_cols=257 Identities=22% Similarity=0.317 Sum_probs=193.0
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC--cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceE
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
++|++.+.||+|++|.||+|.+..+++.||+|++..... ...+.+.+|+++++.++||||+++++++... ...
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 75 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRK-----KRL 75 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccC-----CeE
Confidence 468999999999999999999988899999999864322 2345688999999999999999999996544 489
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
++||||++++++.++..... .+++.+++.++.|++.||+|||+. +++||||+|+||++++++.+||+|||+
T Consensus 76 ~lv~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~ 146 (286)
T cd07846 76 YLVFEFVDHTVLDDLEKYPN------GLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGF 146 (286)
T ss_pred EEEEecCCccHHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeee
Confidence 99999999999988776543 589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD 767 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~ 767 (833)
+........ ......++..|+|||+..+ ..++.++|||| +|+.+++++++..++......+
T Consensus 147 ~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~s----------lG~~l~el~~g~~~~~~~~~~~ 208 (286)
T cd07846 147 ARTLAAPGE--------VYTDYVATRWYRAPELLVGDTKYGRAVDIWA----------VGCLVTEMLTGEPLFPGDSDID 208 (286)
T ss_pred eeeccCCcc--------ccCcccceeeccCcHHhccccccCchHhHHH----------HHHHHHHHHcCCCCCCCCchHH
Confidence 876543221 1122458899999998765 44788999999 6777777777765543111100
Q ss_pred c---------------------cchhhhcccc-chhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 768 P---------------------SLLMEVMTNN-SMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 768 ~---------------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
. ......+... ...........+.++..+.+++.+||..+|++|||+.++++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 209 QLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred HHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 0 0000000000 00000000112234677899999999999999999999875
No 299
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=9.2e-33 Score=291.03 Aligned_cols=255 Identities=21% Similarity=0.299 Sum_probs=192.7
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC-cchhHHHHHHHH-HhhcCCCccceEeeEeecCCCCCCceE
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEA-LRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
++|++.+.||+|+||.||+|++..+|+.||+|+++.... .....+..|+.+ ++..+||||+++++++...+ ..
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~-----~~ 75 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREG-----DV 75 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCC-----cE
Confidence 478999999999999999999999999999999875432 223455666665 55568999999999976544 78
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
++||||++ |+|.+++...... ...+++..++.++.|++.||+|||+++ +++||||||+||+++.++.+||+|||.
T Consensus 76 ~lv~e~~~-~~l~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~ 150 (283)
T cd06617 76 WICMEVMD-TSLDKFYKKVYDK--GLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGI 150 (283)
T ss_pred EEEhhhhc-ccHHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 99999997 6898887653221 126899999999999999999999853 899999999999999999999999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccCC----CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccc
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG----SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVME 764 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~ 764 (833)
+........ .....|+..|+|||++.+ ..++.++|+|| +|+++++++++..|+....
T Consensus 151 ~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~s----------lG~~l~~l~~g~~p~~~~~ 211 (283)
T cd06617 151 SGYLVDSVA---------KTIDAGCKPYMAPERINPELNQKGYDVKSDVWS----------LGITMIELATGRFPYDSWK 211 (283)
T ss_pred ccccccccc---------cccccCCccccChhhcCCcccccccCccccchh----------hHHHHHHHHhCCCCCCccc
Confidence 986543211 112358899999998765 44688999999 7888999999988865211
Q ss_pred cccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 765 IVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
..-... ....... ........++..+.+++.+||..+|++|||++++++.
T Consensus 212 ~~~~~~-~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 212 TPFQQL-KQVVEEP-----SPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred cCHHHH-HHHHhcC-----CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 100000 0111100 0111112356778999999999999999999999873
No 300
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=4.4e-33 Score=289.10 Aligned_cols=248 Identities=23% Similarity=0.295 Sum_probs=199.8
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC---cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceE
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK---GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
+|++.+.||.|+||.||+|.+..+++.||+|.+..... ...+.+.+|++++++++||||+++++++.. ....
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 75 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQD-----EENM 75 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcC-----CCeE
Confidence 58899999999999999999998899999999974422 345688999999999999999999988544 3489
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
++||||+++++|.+++.... .+++..+..++.|+++||.|||+. +++|+||+|+||++++++.++|+|||.
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~ 146 (258)
T cd05578 76 YLVVDLLLGGDLRYHLSQKV------KFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNI 146 (258)
T ss_pred EEEEeCCCCCCHHHHHHhcC------CcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeeccc
Confidence 99999999999999997653 688999999999999999999999 999999999999999999999999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccc
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDP 768 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~ 768 (833)
+....... ......|+..|+|||++.+..++.++|+|| .|+++++++++..|+........
T Consensus 147 ~~~~~~~~---------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s----------lG~~l~~l~~g~~p~~~~~~~~~ 207 (258)
T cd05578 147 ATKVTPDT---------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWS----------LGVTAYECLRGKRPYRGHSRTIR 207 (258)
T ss_pred ccccCCCc---------cccccCCChhhcCHHHHcccCCCCcccchh----------hHHHHHHHHhCCCCCCCCCccHH
Confidence 87654322 111245889999999998888999999999 88889999999888763321111
Q ss_pred cchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCH--HHHH
Q 040925 769 SLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDM--RDVV 818 (833)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~--~eil 818 (833)
......... .....+...+..+.+++.+||..||++||++ +|++
T Consensus 208 ~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 208 DQIRAKQET------ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred HHHHHHhcc------ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 111111110 1112233456788999999999999999999 6654
No 301
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=7.5e-33 Score=298.77 Aligned_cols=265 Identities=22% Similarity=0.268 Sum_probs=199.4
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC-CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceE
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY-KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
.++|++.+.||+|++|.||+|++..+++.||+|+++... ......+.+|+.++++++||||+++++++....+......
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 468999999999999999999999899999999986432 2334568889999999999999999998876665555678
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
++||||++ +++.+++... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 84 ~lv~e~~~-~~l~~~~~~~-------~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~ 152 (336)
T cd07849 84 YIVQELME-TDLYKLIKTQ-------HLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGL 152 (336)
T ss_pred EEEehhcc-cCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccc
Confidence 99999997 4888887643 589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD 767 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~ 767 (833)
+.......... .......||+.|+|||++.+ ..++.++|||| .|++++++++|..|+...+...
T Consensus 153 ~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dvws----------lGvil~el~~G~~~f~~~~~~~ 217 (336)
T cd07849 153 ARIADPEHDHT-----GFLTEYVATRWYRAPEIMLNSKGYTKAIDIWS----------VGCILAEMLSNRPLFPGKDYLH 217 (336)
T ss_pred eeecccccccc-----CCcCCcCcCCCccChHHhhCCCCCCcHHHHHH----------HHHHHHHHHhCCCCCCCCCHHH
Confidence 97654322111 11223568999999998654 56889999999 7778888888877664221100
Q ss_pred -------------ccchhhhccc-------cchhhhh--hhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 768 -------------PSLLMEVMTN-------NSMIQED--KRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 768 -------------~~~~~~~~~~-------~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
+......... ....... .....+..+..+.+++.+||+.||++|||+.|+++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 218 QLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000000000 0000000 000012235678899999999999999999999886
No 302
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-33 Score=298.13 Aligned_cols=270 Identities=24% Similarity=0.334 Sum_probs=203.1
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC-CcchhHHHHHHHHHhhcCCCccceEeeEeecCC-CCCCceE
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY-KGASRSFVAECEALRNIRHRNLIKIITICSSTD-FKGTDFK 608 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~~~~ 608 (833)
..|...+.||+|+||.||+++++.+|+.||||.++... ....+..-+|+++|++++|||||+++++-.... .--....
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 34666789999999999999999999999999997543 345677889999999999999999998732221 0113457
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeee--cCCC--cEEEc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLL--DHDM--VAHVC 684 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll--~~~~--~~kL~ 684 (833)
.+|||||+||||+.++.+-.. .+.+++.+.+.++.+++.||.|||+. |||||||||.||++ +.+| ..||+
T Consensus 93 vlvmEyC~gGsL~~~L~~PEN---~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLt 166 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNSPEN---AYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLT 166 (732)
T ss_pred eEEEeecCCCcHHHHhcCccc---ccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeee
Confidence 899999999999999987543 34799999999999999999999999 99999999999998 3445 58999
Q ss_pred ccccccccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccc
Q 040925 685 DFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVM 763 (833)
Q Consensus 685 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~ 763 (833)
|||.|+..++.. ...+++||+.|.+||.+.. +.|+..+|.|| +|+++|+.++|.+|+...
T Consensus 167 DfG~Arel~d~s---------~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS----------~GvtlY~caTG~lPF~p~ 227 (732)
T KOG4250|consen 167 DFGAARELDDNS---------LFTSLVGTEEYLHPELYERQKKYTATVDLWS----------FGVTLYECATGELPFIPF 227 (732)
T ss_pred cccccccCCCCC---------eeeeecCchhhcChHHHhhccCcCceeehhh----------hhhHHHHHhccCCCCCcC
Confidence 999999877643 3446789999999999884 88999999999 888999999999987632
Q ss_pred cccc--ccchhhhccccc-------------------hhhhhhhhchHHHHHHHHHHhhccCCCCCCCCC--CHHHHHHH
Q 040925 764 EIVD--PSLLMEVMTNNS-------------------MIQEDKRVKTEECLNAIIRTGVLCSMESPFERM--DMRDVVAK 820 (833)
Q Consensus 764 ~~~~--~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP--t~~eil~~ 820 (833)
.... .........+.. ..+. ...........+...+..++..+|++|. ...+....
T Consensus 228 ~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~-p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~ 306 (732)
T KOG4250|consen 228 GGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQ-PNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAE 306 (732)
T ss_pred CCccccchhhhhhhccCCCceeEeeecccCCceeeeccCCC-cccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHH
Confidence 2211 011111111000 0000 0111122334455667778999999999 77777776
Q ss_pred HHHhhh
Q 040925 821 LCHTRE 826 (833)
Q Consensus 821 L~~i~~ 826 (833)
+..|..
T Consensus 307 ~~dIL~ 312 (732)
T KOG4250|consen 307 VDDILN 312 (732)
T ss_pred HHHHHh
Confidence 666643
No 303
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=1.4e-32 Score=290.92 Aligned_cols=257 Identities=22% Similarity=0.292 Sum_probs=190.6
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
++|++.+.||+|++|.||+|+...+++.||+|.++.... .....+.+|++++++++||||+++++++...+ ..+
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 79 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKK-----TLT 79 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCC-----eEE
Confidence 579999999999999999999988899999999875432 22345778999999999999999999976544 899
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||++ ++|.+++..... .+++..++.++.|+++||.|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 80 lv~e~~~-~~L~~~~~~~~~-----~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~ 150 (291)
T cd07844 80 LVFEYLD-TDLKQYMDDCGG-----GLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLA 150 (291)
T ss_pred EEEecCC-CCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccc
Confidence 9999997 499998876532 578999999999999999999999 9999999999999999999999999998
Q ss_pred cccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDP 768 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~ 768 (833)
+....... ......++..|+|||++.+ ..++.++|||| .|+++++++++..|+........
T Consensus 151 ~~~~~~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~s----------lG~il~~l~~g~~~~~~~~~~~~ 212 (291)
T cd07844 151 RAKSVPSK--------TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWG----------VGCIFYEMATGRPLFPGSTDVED 212 (291)
T ss_pred cccCCCCc--------cccccccccccCCcHHhhcCcccCcHHHHHH----------HHHHHHHHHhCCCCCCCCccHHH
Confidence 75432111 0111246889999998765 45889999999 67777777777766532110000
Q ss_pred --------------cchhhhcc--------ccchhhhhhhhchHHH--HHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 769 --------------SLLMEVMT--------NNSMIQEDKRVKTEEC--LNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 769 --------------~~~~~~~~--------~~~~~~~~~~~~~~~~--~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
........ ................ ...+.+++.+|++.||++|||+.|+++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 213 QLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred HHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 00000000 0000000000000011 256789999999999999999999875
No 304
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=2.1e-32 Score=285.73 Aligned_cols=261 Identities=24% Similarity=0.320 Sum_probs=202.5
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC-CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY-KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
++|++.+.||.|++|+||+|....++..||+|++.... ....+.+.+|+++++.++|+||+++++.+.... ..+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~ 75 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGD-----ELW 75 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCC-----EEE
Confidence 47999999999999999999998889999999986432 224577899999999999999999999875544 889
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||+++++|.+++...... ..+++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||++
T Consensus 76 iv~e~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~ 149 (267)
T cd06610 76 LVMPYLSGGSLLDIMKSSYPR---GGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVS 149 (267)
T ss_pred EEEeccCCCcHHHHHHHhccc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchH
Confidence 999999999999999764320 1589999999999999999999999 9999999999999999999999999998
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCC-CCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS-EASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDP 768 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~ 768 (833)
.......... ........|+..|+|||++... .++.++|+|| +|+.+++++++..|+......
T Consensus 150 ~~~~~~~~~~----~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~s----------lG~i~~~l~~g~~p~~~~~~~-- 213 (267)
T cd06610 150 ASLADGGDRT----RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWS----------FGITAIELATGAAPYSKYPPM-- 213 (267)
T ss_pred HHhccCcccc----ccccccccCChhhcChHHHccccCcCcccchHh----------HhHHHHHHHhCCCCccccChh--
Confidence 7665432211 0112234689999999998776 7899999999 888889999998887532211
Q ss_pred cchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 769 SLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
............. .........++..+.+++.+||..||++|||++|+++
T Consensus 214 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 214 KVLMLTLQNDPPS-LETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred hhHHHHhcCCCCC-cCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 1111111110000 0000111245678899999999999999999999986
No 305
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1e-32 Score=293.00 Aligned_cols=257 Identities=21% Similarity=0.286 Sum_probs=191.9
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCc-----chhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCc
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG-----ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTD 606 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 606 (833)
+|++.+.||+|++|.||+|.+..+++.||+|.++..... ....+..|++++++++|+||+++++++....
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~----- 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKS----- 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCC-----
Confidence 478889999999999999999888999999999754322 2345778999999999999999999976543
Q ss_pred eEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccc
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDF 686 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 686 (833)
..++||||+ +|+|.+++..... .+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 76 ~~~lv~e~~-~~~L~~~i~~~~~-----~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~df 146 (298)
T cd07841 76 NINLVFEFM-ETDLEKVIKDKSI-----VLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADF 146 (298)
T ss_pred EEEEEEccc-CCCHHHHHhccCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccc
Confidence 899999999 8899999976431 589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccc
Q 040925 687 GLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEI 765 (833)
Q Consensus 687 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~ 765 (833)
|+++....... ......+++.|+|||.+.+ ..++.++|||| +|++++++.++..++.....
T Consensus 147 g~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~s----------lG~il~e~~~g~~~~~~~~~ 208 (298)
T cd07841 147 GLARSFGSPNR--------KMTHQVVTRWYRAPELLFGARHYGVGVDMWS----------VGCIFAELLLRVPFLPGDSD 208 (298)
T ss_pred eeeeeccCCCc--------cccccccceeeeCHHHHhCCCCCCcHHHHHH----------HHHHHHHHHcCCccccCCcc
Confidence 99986644221 1112347889999998754 45789999999 66667777666433321110
Q ss_pred cc-------------ccc------hhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 766 VD-------------PSL------LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 766 ~~-------------~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.+ ... ......................+..+.+++.+||+.||++|||+.|+++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 209 IDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred HHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 00 000 00000000000000011122345678899999999999999999999874
No 306
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.5e-32 Score=294.47 Aligned_cols=201 Identities=24% Similarity=0.328 Sum_probs=157.8
Q ss_pred ceeccCcceEEEEEEECC--CceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEEEe
Q 040925 537 NMIGQGSFGYVYKGTLGE--DEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEY 614 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 614 (833)
.+||+|+||.||+|+... ++..||+|.++.. .....+.+|++++++++||||+++++++.... ....++||||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---~~~~~lv~e~ 81 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGT--GISMSACREIALLRELKHPNVIALQKVFLSHS---DRKVWLLFDY 81 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCC--CCcHHHHHHHHHHHhCCCCCeeeEEEEEeccC---CCeEEEEEee
Confidence 589999999999999753 5678999998633 23356789999999999999999999875432 3478999999
Q ss_pred cCCCChhhhhccCCCc---cccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeee----cCCCcEEEcccc
Q 040925 615 MENGSLKDWLHQSDDQ---VEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLL----DHDMVAHVCDFG 687 (833)
Q Consensus 615 ~~~gsL~~~l~~~~~~---~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kL~DfG 687 (833)
++ ++|.+++...... .....+++..++.++.|++.||.|||+. +|+||||||+||++ +.++.+||+|||
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07867 82 AE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred eC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeecc
Confidence 97 4888887543211 1122588999999999999999999999 99999999999999 566799999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEK 761 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~ 761 (833)
+++........ ........||+.|+|||++.+ ..++.++|||| .|+++++++++..|+.
T Consensus 158 ~a~~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwS----------lG~il~el~tg~~~f~ 217 (317)
T cd07867 158 FARLFNSPLKP-----LADLDPVVVTFWYRAPELLLGARHYTKAIDIWA----------IGCIFAELLTSEPIFH 217 (317)
T ss_pred ceeccCCCccc-----ccccCcceecccccCcHHhcCCCccCcHHHHHh----------HHHHHHHHHhCCCCcc
Confidence 99876443211 111223568999999999876 45889999999 7777888888777654
No 307
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=2.2e-32 Score=285.01 Aligned_cols=255 Identities=24% Similarity=0.351 Sum_probs=199.7
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCc--chhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG--ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
+|++.+.||+|++|.||+|....+++.||+|.++..... ..+.+.+|+.++++++|+||+++++++...+ ..+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~-----~~~ 75 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHRE-----KVY 75 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCC-----EEE
Confidence 588899999999999999999888999999999755443 5578999999999999999999999865443 899
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+|+||+++++|.+++.... .+++..++.++.|++.|++|||+. +|+|+||+|+||+++.++.+||+|||.+
T Consensus 76 lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~ 146 (264)
T cd06626 76 IFMEYCSGGTLEELLEHGR------ILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCA 146 (264)
T ss_pred EEEecCCCCcHHHHHhhcC------CCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccc
Confidence 9999999999999998653 578899999999999999999999 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCCC---CCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSE---ASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIV 766 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~ 766 (833)
........... .......+++.|+|||++.+.. ++.++|||| +|++++++.++..|+...+
T Consensus 147 ~~~~~~~~~~~----~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s----------~G~il~~l~~g~~pf~~~~-- 210 (264)
T cd06626 147 VKLKNNTTTMG----EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWS----------LGCVVLEMATGKRPWSELD-- 210 (264)
T ss_pred cccCCCCCccc----ccccCCcCCcCccChhhccCCCCCCCCcccchHH----------HHHHHHHHHhCCCCccCCc--
Confidence 87654322110 0012345889999999987766 889999999 7888889999888865221
Q ss_pred cccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 767 DPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
............ .....+....+...+.+++.+||+.+|++|||++|++.
T Consensus 211 -~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 211 -NEFQIMFHVGAG--HKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred -chHHHHHHHhcC--CCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 111000000000 00001111223567789999999999999999999875
No 308
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.3e-32 Score=288.86 Aligned_cols=249 Identities=22% Similarity=0.368 Sum_probs=197.5
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccC-CcchhHHHHHHHHHhhcC---CCccceEeeEeecCCCCCCce
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY-KGASRSFVAECEALRNIR---HRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~~~ 607 (833)
.|++.+.||+|+||.||+|.+..+++.||+|.++... ......+.+|+.++++++ |||++++++++.... .
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~-----~ 76 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGP-----R 76 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCC-----E
Confidence 4788899999999999999998899999999987542 234467889999999996 999999999875543 8
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.++||||+++++|.+++... .+++..++.++.|++.||.|||+. +|+||||+|+||+++.++.++|+|||
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~-------~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg 146 (277)
T cd06917 77 LWIIMEYAEGGSVRTLMKAG-------PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFG 146 (277)
T ss_pred EEEEEecCCCCcHHHHHHcc-------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCC
Confidence 89999999999999998653 588999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIV 766 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~ 766 (833)
.+........ ......|+..|+|||++.+ ..++.++|+|| +|+++++++++..|+...+..
T Consensus 147 ~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~s----------lG~~l~~ll~g~~p~~~~~~~ 208 (277)
T cd06917 147 VAALLNQNSS--------KRSTFVGTPYWMAPEVITEGKYYDTKADIWS----------LGITIYEMATGNPPYSDVDAF 208 (277)
T ss_pred ceeecCCCcc--------ccccccCCcceeCHHHhccCCccccchhHHH----------HHHHHHHHHhCCCCCCCCChh
Confidence 9986654321 1122458999999998765 44688999999 888899999998887532211
Q ss_pred cccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 767 DPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.... ...... ........++..+.+++.+||..||++||++.|+++.
T Consensus 209 ~~~~---~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 209 RAMM---LIPKSK----PPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred hhhh---ccccCC----CCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 1110 000100 0011111246678999999999999999999999774
No 309
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.6e-32 Score=290.36 Aligned_cols=259 Identities=24% Similarity=0.285 Sum_probs=190.9
Q ss_pred HhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 529 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
++++|.+.+.||+|+||.||+|....+++.||+|+++.... .....+.+|+.+++.++|+||+++++++.... .
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~-----~ 77 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKE-----T 77 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCC-----e
Confidence 35689999999999999999999988899999999965432 22346788999999999999999999976543 8
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.++||||++ +++.+++..... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 78 ~~lv~e~~~-~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg 148 (291)
T cd07870 78 LTFVFEYMH-TDLAQYMIQHPG-----GLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFG 148 (291)
T ss_pred EEEEEeccc-CCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccc
Confidence 899999996 688777654321 578888999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCCC-CCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS-EASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIV 766 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~ 766 (833)
+++....... ......+++.|+|||++.+. .++.++|||| +|+++++++++..|+......
T Consensus 149 ~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~s----------lG~~l~~l~~g~~~f~~~~~~ 210 (291)
T cd07870 149 LARAKSIPSQ--------TYSSEVVTLWYRPPDVLLGATDYSSALDIWG----------AGCIFIEMLQGQPAFPGVSDV 210 (291)
T ss_pred cccccCCCCC--------CCCCccccccccCCceeecCCCCCcHHHHHH----------HHHHHHHHHhCCCCCCCchhH
Confidence 9875433211 11123578999999988654 4788999999 777788888887776421100
Q ss_pred ccc------------------------chhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 767 DPS------------------------LLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 767 ~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
... ....................-.....+.+++.+|+..||++|||++|++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 211 FEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred HHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 000 00000000000000000000011456789999999999999999999875
No 310
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.9e-32 Score=285.79 Aligned_cols=256 Identities=23% Similarity=0.310 Sum_probs=180.8
Q ss_pred ceeccCcceEEEEEEECCC--ceEEEEEEeeccC-CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEEE
Q 040925 537 NMIGQGSFGYVYKGTLGED--EMIVAVKVINLKY-KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFE 613 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~--~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 613 (833)
+.||+|+||.||+|..... ...+++|.++... ....+.+.+|+.+++.++||||+++++++.... ..++|||
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~-----~~~lv~e 75 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAI-----PYLLVFE 75 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCC-----ccEEEEe
Confidence 3699999999999975422 3456677765432 234568999999999999999999999976544 7899999
Q ss_pred ecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccC
Q 040925 614 YMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLS 693 (833)
Q Consensus 614 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 693 (833)
|+++|+|.+++...... ....++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 76 ~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~ 150 (268)
T cd05086 76 YCELGDLKSYLSQEQWH--RRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRY 150 (268)
T ss_pred cCCCCcHHHHHHhhhcc--cccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccC
Confidence 99999999999764321 11467778889999999999999999 99999999999999999999999999986432
Q ss_pred cccccccccCCCccccccccccccCccccCC-------CCCCcccccccCCcCCCccccCCccHHHHHHH-hCCCccccc
Q 040925 694 DHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-------SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKT-ALPEKVMEI 765 (833)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~-~~p~~~~~~ 765 (833)
.... ........|+..|+|||++.. ..++.++|||| +|+++++++++ ..|+....
T Consensus 151 ~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Diws----------lG~~l~el~~~~~~p~~~~~- 213 (268)
T cd05086 151 KEDY------IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWA----------LGVTLWELFENAAQPYSHLS- 213 (268)
T ss_pred cchh------hhcccCCcCcccccCchhcccccCccccCCCCCcchhHH----------HHHHHHHHHhCCCCCCCCCC-
Confidence 2111 011123458899999998743 34578899999 67777777654 33432111
Q ss_pred ccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 040925 766 VDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLC 822 (833)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 822 (833)
+............... ........+.+.+.+++..|| .+|++|||++||++.|.
T Consensus 214 -~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 214 -DREVLNHVIKDQQVKL-FKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred -HHHHHHHHHhhccccc-CCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 1111111111100000 000111124556788999999 67999999999998874
No 311
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.8e-32 Score=287.62 Aligned_cols=248 Identities=25% Similarity=0.353 Sum_probs=197.7
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccC-CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeE
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY-KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAF 610 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 610 (833)
-|++.+.||+|+||.||+|.+..+++.||+|.+.... ....+.+.+|+.++++++||||+++++++.... ..++
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~~~l 79 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT-----KLWI 79 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCC-----eEEE
Confidence 3778899999999999999998889999999986432 223467889999999999999999999976554 8999
Q ss_pred EEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccc
Q 040925 611 VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690 (833)
Q Consensus 611 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 690 (833)
||||+++++|.+++... .+++..+..++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||++.
T Consensus 80 v~e~~~~~~l~~~i~~~-------~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~ 149 (277)
T cd06641 80 IMEYLGGGSALDLLEPG-------PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAG 149 (277)
T ss_pred EEEeCCCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccce
Confidence 99999999999998643 588999999999999999999999 99999999999999999999999999987
Q ss_pred ccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccc
Q 040925 691 FLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSL 770 (833)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~ 770 (833)
........ .....|+..|+|||.+.+..++.++|+|| +|++++++.++..|+.... +..
T Consensus 150 ~~~~~~~~--------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~s----------lG~~l~~l~~g~~p~~~~~---~~~ 208 (277)
T cd06641 150 QLTDTQIK--------RNTFVGTPFWMAPEVIKQSAYDSKADIWS----------LGITAIELAKGEPPHSELH---PMK 208 (277)
T ss_pred ecccchhh--------hccccCCccccChhhhccCCCCchhhHHH----------HHHHHHHHHcCCCCCCccc---hHH
Confidence 65432211 11245889999999998888899999999 7788888888888765221 111
Q ss_pred hhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 771 LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
......... .......++..+.+++.+||..+|++||++.++++.
T Consensus 209 ~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 209 VLFLIPKNN-----PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred HHHHHhcCC-----CCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 111110000 011122346678899999999999999999999985
No 312
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=2e-32 Score=289.04 Aligned_cols=258 Identities=21% Similarity=0.259 Sum_probs=193.4
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccC--CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
+|++.+.||+|++|.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++.... ..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-----~~~ 75 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGS-----GFV 75 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCC-----eeE
Confidence 5889999999999999999998899999999997543 233467899999999999999999999976544 889
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||+ +++|.+++..... .+++.+++.++.|+++||+|||+. +++|+||||+||+++.++.++|+|||.+
T Consensus 76 ~v~e~~-~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~ 146 (286)
T cd07832 76 LVMEYM-PSDLSEVLRDEER-----PLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLA 146 (286)
T ss_pred EEeccc-CCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeec
Confidence 999999 9999999875432 689999999999999999999999 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCC-CCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc-
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS-EASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD- 767 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~- 767 (833)
........ .......|+..|+|||++.+. .++.++|||| .|+++++++++..++.......
T Consensus 147 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s----------lG~~l~~l~tg~~~~~~~~~~~~ 209 (286)
T cd07832 147 RLFSEEEP-------RLYSHQVATRWYRAPELLYGARKYDPGVDLWA----------VGCIFAELLNGSPLFPGENDIEQ 209 (286)
T ss_pred ccccCCCC-------CccccccCcccccCceeeeccccCCchhHHHH----------HHHHHHHHHcCCcCcCCCCHHHH
Confidence 86644321 011124589999999987654 4689999999 6666667766644332110000
Q ss_pred ------------ccchh------hhccccchhhh--hhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 768 ------------PSLLM------EVMTNNSMIQE--DKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 768 ------------~~~~~------~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
+.... ........... ......++....+.+++.+|+..||++|||++++++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 210 LAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred HHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00000 00000000000 0001112345788999999999999999999999864
No 313
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=2.2e-32 Score=291.37 Aligned_cols=247 Identities=23% Similarity=0.328 Sum_probs=195.0
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC---cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK---GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
..|++.+.||+|++|.||+|+...+++.||+|.+..... ...+.+.+|+++++.++||||+++++++...+ .
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~-----~ 89 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREH-----T 89 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCC-----e
Confidence 458899999999999999999988899999999864322 22356889999999999999999999986654 7
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.++||||++ |++.+++..... .+++..+..++.|++.||.|||+. +|+||||+|+||++++++.+||+|||
T Consensus 90 ~~lv~e~~~-g~l~~~~~~~~~-----~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg 160 (307)
T cd06607 90 AWLVMEYCL-GSASDILEVHKK-----PLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFG 160 (307)
T ss_pred EEEEHHhhC-CCHHHHHHHccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecC
Confidence 899999997 588777764332 589999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccC---CCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGM---GSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVME 764 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~ 764 (833)
++....... ...|++.|+|||++. ...++.++|||| +|++++++.++..|+...+
T Consensus 161 ~~~~~~~~~------------~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s----------~G~il~el~tg~~p~~~~~ 218 (307)
T cd06607 161 SASLVSPAN------------SFVGTPYWMAPEVILAMDEGQYDGKVDVWS----------LGITCIELAERKPPLFNMN 218 (307)
T ss_pred cceecCCCC------------CccCCccccCceeeeccCCCCCCcccchHH----------HHHHHHHHHcCCCCCCCcc
Confidence 987543221 235888999999874 456888999999 8888899999888764322
Q ss_pred cccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 765 IVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
..... ...... .........++..+.+++.+||..||++||++.+++..
T Consensus 219 ~~~~~--~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 219 AMSAL--YHIAQN-----DSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred HHHHH--HHHhcC-----CCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 11110 000000 00111123456778999999999999999999999874
No 314
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.4e-32 Score=290.60 Aligned_cols=265 Identities=20% Similarity=0.263 Sum_probs=189.2
Q ss_pred cCCccCceeccCcceEEEEEEECCC---ceEEEEEEeeccCCcch-----------hHHHHHHHHHhhcCCCccceEeeE
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGED---EMIVAVKVINLKYKGAS-----------RSFVAECEALRNIRHRNLIKIITI 596 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~~~~~ 596 (833)
++|.+.+.||+|+||.||+|.+..+ +..+|+|+......... .....+...+..+.|+++++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 5799999999999999999999876 66777776543322111 112233344556789999999987
Q ss_pred eecCCCCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeec
Q 040925 597 CSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLD 676 (833)
Q Consensus 597 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~ 676 (833)
+.... ......+++||++. .++.+.+.... ..++..+..++.|++.||+|||+. +|+||||||+||+++
T Consensus 92 ~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~ 160 (294)
T PHA02882 92 GSFKR-CRMYYRFILLEKLV-ENTKEIFKRIK------CKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVD 160 (294)
T ss_pred eeEec-CCceEEEEEEehhc-cCHHHHHHhhc------cCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEc
Confidence 65432 11224578888875 47777766532 357888999999999999999999 999999999999999
Q ss_pred CCCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHH
Q 040925 677 HDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKT 756 (833)
Q Consensus 677 ~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~ 756 (833)
.++.+||+|||+|+........... .........||+.|+|||+..+..++.++|||| +|+++++++++
T Consensus 161 ~~~~~~l~DFGla~~~~~~~~~~~~-~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwS----------lG~~l~el~~g 229 (294)
T PHA02882 161 GNNRGYIIDYGIASHFIIHGKHIEY-SKEQKDLHRGTLYYAGLDAHNGACVTRRGDLES----------LGYCMLKWAGI 229 (294)
T ss_pred CCCcEEEEEcCCceeeccCCccccc-ccccccccCCCccccCHHHhCCCCCCcHHHHHH----------HHHHHHHHHhC
Confidence 9999999999999876432211100 011112346999999999999999999999999 88899999999
Q ss_pred hCCCcccccccccc---hhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 040925 757 ALPEKVMEIVDPSL---LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKL 821 (833)
Q Consensus 757 ~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 821 (833)
..|+.......... ..+..... .........+++.+.+++..||..+|++||+++++.+.+
T Consensus 230 ~~P~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 230 KLPWKGFGHNGNLIHAAKCDFIKRL----HEGKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred CCCCCccccchHHHHHhHHHHHHHh----hhhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 99986332111000 00010000 001112234567889999999999999999999999875
No 315
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.8e-32 Score=287.45 Aligned_cols=243 Identities=22% Similarity=0.249 Sum_probs=185.8
Q ss_pred eeccCcceEEEEEEECCCceEEEEEEeeccCCc---chhHHHHHHHHHhh---cCCCccceEeeEeecCCCCCCceEeEE
Q 040925 538 MIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG---ASRSFVAECEALRN---IRHRNLIKIITICSSTDFKGTDFKAFV 611 (833)
Q Consensus 538 ~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~---l~h~niv~~~~~~~~~~~~~~~~~~lv 611 (833)
.||+|+||.||+|.+..+++.||+|.++..... ....+.+|..+++. .+||+|+.+++++...+ ..++|
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~lv 75 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPD-----KLCFI 75 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCC-----eEEEE
Confidence 489999999999999989999999998643221 12234445444433 36999999999875544 78999
Q ss_pred EEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccc
Q 040925 612 FEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKF 691 (833)
Q Consensus 612 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 691 (833)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 76 ~e~~~~~~L~~~i~~~~------~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~ 146 (279)
T cd05633 76 LDLMNGGDLHYHLSQHG------VFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 146 (279)
T ss_pred EecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCccee
Confidence 99999999999987654 689999999999999999999999 999999999999999999999999999875
Q ss_pred cCcccccccccCCCccccccccccccCccccC-CCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccc
Q 040925 692 LSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGM-GSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSL 770 (833)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~ 770 (833)
..... .....||+.|+|||... +..++.++|||| .|+++++++++..|+......+...
T Consensus 147 ~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s----------lG~~l~~l~~g~~pf~~~~~~~~~~ 206 (279)
T cd05633 147 FSKKK----------PHASVGTHGYMAPEVLQKGTAYDSSADWFS----------LGCMLFKLLRGHSPFRQHKTKDKHE 206 (279)
T ss_pred ccccC----------ccCcCCCcCccCHHHhcCCCCCCchhhhHH----------HHHHHHHHHhCCCCcCCCCCcCHHH
Confidence 43221 11235899999999876 456899999999 7888999999998875332211111
Q ss_pred hhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCC-----CHHHHHHH
Q 040925 771 LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERM-----DMRDVVAK 820 (833)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~ 820 (833)
....... .....++.++..+.+++.+||..||++|| |++|++++
T Consensus 207 ~~~~~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 207 IDRMTLT------VNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred HHHHhhc------CCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 1110000 01112234567888999999999999999 59988775
No 316
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=2.1e-32 Score=288.00 Aligned_cols=250 Identities=22% Similarity=0.269 Sum_probs=197.0
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEE
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFV 611 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 611 (833)
.|...+.||+|++|.||+|....+++.||+|+++.......+.+.+|+.+++.++||||+++++++...+ ..++|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~-----~~~~v 94 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGD-----ELWVV 94 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCC-----eEEEE
Confidence 3555679999999999999998889999999987554445567889999999999999999999876544 88999
Q ss_pred EEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccc
Q 040925 612 FEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKF 691 (833)
Q Consensus 612 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 691 (833)
+||+++++|.+++... .+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||.+..
T Consensus 95 ~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~ 164 (285)
T cd06648 95 MEFLEGGALTDIVTHT-------RMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQ 164 (285)
T ss_pred EeccCCCCHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchh
Confidence 9999999999998762 588999999999999999999999 999999999999999999999999998875
Q ss_pred cCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccch
Q 040925 692 LSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLL 771 (833)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~ 771 (833)
...... ......|++.|+|||+..+..++.++|||| +|+++++++++..|+...+.. ..
T Consensus 165 ~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s----------lGv~l~ell~g~~p~~~~~~~---~~ 223 (285)
T cd06648 165 VSKEVP--------RRKSLVGTPYWMAPEVISRLPYGTEVDIWS----------LGIMVIEMVDGEPPYFNEPPL---QA 223 (285)
T ss_pred hccCCc--------ccccccCCccccCHHHhcCCCCCCcccHHH----------HHHHHHHHHhCCCCCcCCCHH---HH
Confidence 433211 111245899999999998888999999999 788888888888776422110 00
Q ss_pred hhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 772 MEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
........ +........++..+.+++.+||..+|++|||+.++++.
T Consensus 224 ~~~~~~~~---~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 224 MKRIRDNL---PPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred HHHHHhcC---CCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence 00000000 00000111245678999999999999999999999863
No 317
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1.8e-32 Score=286.45 Aligned_cols=255 Identities=22% Similarity=0.345 Sum_probs=196.5
Q ss_pred CCccCceeccCcceEEEEEEECC-CceEEEEEEeeccC----------CcchhHHHHHHHHHhh-cCCCccceEeeEeec
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGE-DEMIVAVKVINLKY----------KGASRSFVAECEALRN-IRHRNLIKIITICSS 599 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~ 599 (833)
+|++.+.||+|+||.||+|.+.. +++.+|+|.+.... .....++..|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 48889999999999999999987 67899999885321 1123457778888865 799999999999765
Q ss_pred CCCCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhh-cCCCCceeeCCCCCCeeecCC
Q 040925 600 TDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH-HCQPPMVHGDLKPSNVLLDHD 678 (833)
Q Consensus 600 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~-~~~~~ivH~Dlkp~NIll~~~ 678 (833)
.+ ..++||||+++++|.+++...... ...+++..++.++.|++.||.|||+ . +++|+||||+||+++.+
T Consensus 81 ~~-----~~~lv~e~~~~~~l~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~~~~ 150 (269)
T cd08528 81 ND-----RLYIVMDLIEGAPLGEHFNSLKEK--KQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIMLGED 150 (269)
T ss_pred CC-----eEEEEEecCCCCcHHHHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEECCC
Confidence 44 899999999999999988542211 1268899999999999999999996 5 89999999999999999
Q ss_pred CcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhC
Q 040925 679 MVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTAL 758 (833)
Q Consensus 679 ~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~ 758 (833)
+.+||+|||.+....... ......|+..|+|||++.+..++.++|+|| +|+.+++++++..
T Consensus 151 ~~~~l~dfg~~~~~~~~~---------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~s----------lG~ll~~l~~g~~ 211 (269)
T cd08528 151 DKVTITDFGLAKQKQPES---------KLTSVVGTILYSCPEIVKNEPYGEKADVWA----------FGCILYQMCTLQP 211 (269)
T ss_pred CcEEEecccceeeccccc---------ccccccCcccCcChhhhcCCCCchHHHHHH----------HHHHHHHHHhCCC
Confidence 999999999998654422 112345899999999999888999999999 7888889888887
Q ss_pred CCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 040925 759 PEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLC 822 (833)
Q Consensus 759 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 822 (833)
|+...+... ........... ......++..+.+++.+||+.||++||++.|+.++++
T Consensus 212 p~~~~~~~~--~~~~~~~~~~~-----~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 212 PFYSTNMLS--LATKIVEAVYE-----PLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred cccccCHHH--HHHHHhhccCC-----cCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 765322111 11111111000 0011124567889999999999999999999999875
No 318
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-33 Score=286.14 Aligned_cols=246 Identities=22% Similarity=0.313 Sum_probs=192.7
Q ss_pred CceeccCcceEEEEEEECCCceEEEEEEeecc--CCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEEE
Q 040925 536 SNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK--YKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFE 613 (833)
Q Consensus 536 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 613 (833)
.+.||+|.||+||-|+++.+|+.||||++.+. .......+++|+.||+++.||.||.+...|... +.+++|||
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~-----ervFVVME 643 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETP-----ERVFVVME 643 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCC-----ceEEEEeh
Confidence 37899999999999999999999999999643 223457899999999999999999999885544 49999999
Q ss_pred ecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCC---CcEEEccccccc
Q 040925 614 YMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHD---MVAHVCDFGLAK 690 (833)
Q Consensus 614 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kL~DfG~a~ 690 (833)
-+. |+..++|-....+ ++++.....++.||+.||.|||.+ +|+|+||||+|||+... .++||||||+|+
T Consensus 644 Kl~-GDMLEMILSsEkg----RL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfAR 715 (888)
T KOG4236|consen 644 KLH-GDMLEMILSSEKG----RLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFAR 715 (888)
T ss_pred hhc-chHHHHHHHhhcc----cchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeecccccee
Confidence 995 6887777665433 799999999999999999999999 99999999999999643 489999999999
Q ss_pred ccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccc
Q 040925 691 FLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSL 770 (833)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~ 770 (833)
.+++..+ ..+++|||.|.|||+++...|...-|+||. |+++|--+.|.+|+...+.+...+
T Consensus 716 iIgEksF---------RrsVVGTPAYLaPEVLrnkGyNrSLDMWSV----------GVIiYVsLSGTFPFNEdEdIndQI 776 (888)
T KOG4236|consen 716 IIGEKSF---------RRSVVGTPAYLAPEVLRNKGYNRSLDMWSV----------GVIIYVSLSGTFPFNEDEDINDQI 776 (888)
T ss_pred ecchhhh---------hhhhcCCccccCHHHHhhccccccccceee----------eEEEEEEecccccCCCccchhHHh
Confidence 9877543 234689999999999999999999999994 444455556777776444333322
Q ss_pred hhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 771 LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.. ...+.++. ...++....+++|...++..=.+|-|.++-+.+
T Consensus 777 QN----AaFMyPp~---PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh 819 (888)
T KOG4236|consen 777 QN----AAFMYPPN---PWSEISPEAIDLINNLLQVKMRKRYSVDKSLSH 819 (888)
T ss_pred hc----cccccCCC---chhhcCHHHHHHHHHHHHHHHHHhcchHhhccc
Confidence 11 11111111 123455667888888888888889888776544
No 319
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.7e-32 Score=289.11 Aligned_cols=257 Identities=22% Similarity=0.310 Sum_probs=192.4
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC--cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
+|++.+.||+|++|.||+|++..+++.||||.++.... ...+.+.+|++++++++||||+++++++... ...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 75 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-----NKLY 75 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccC-----CcEE
Confidence 48889999999999999999998999999999864432 2335788999999999999999999996544 4889
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||++ ++|.+++...... .+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+||+|||++
T Consensus 76 ~v~e~~~-~~l~~~~~~~~~~----~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~ 147 (284)
T cd07860 76 LVFEFLH-QDLKKFMDASPLS----GIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 147 (284)
T ss_pred EEeeccc-cCHHHHHHhCCCC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccch
Confidence 9999996 6899988764422 689999999999999999999999 9999999999999999999999999998
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCCC-CCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSE-ASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDP 768 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~ 768 (833)
........ ......+++.|+|||++.+.. ++.++|||| +|+++++++++..|+...+..+.
T Consensus 148 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~s----------lG~il~~l~tg~~p~~~~~~~~~ 209 (284)
T cd07860 148 RAFGVPVR--------TYTHEVVTLWYRAPEILLGCKYYSTAVDIWS----------LGCIFAEMVTRRALFPGDSEIDQ 209 (284)
T ss_pred hhcccCcc--------ccccccccccccCCeEEecCCCCCcHHHHHH----------HHHHHHHHHHCCCCCCCCCHHHH
Confidence 76543211 011234788999999876644 588899999 78888888888877542211100
Q ss_pred cch-hhhccc---------------cchhhh----hhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 769 SLL-MEVMTN---------------NSMIQE----DKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 769 ~~~-~~~~~~---------------~~~~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
... ...... ...... ............+.+++.+||+.||++|||++|+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 210 LFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 000 000000 000000 000001123456789999999999999999999975
No 320
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=1.8e-33 Score=270.45 Aligned_cols=204 Identities=24% Similarity=0.326 Sum_probs=168.8
Q ss_pred HhcCCccCceeccCcceEEEEEEECCCc----eEEEEEEeeccC--CcchhHHHHHHHHHhhcCCCccceEeeEeecCCC
Q 040925 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDE----MIVAVKVINLKY--KGASRSFVAECEALRNIRHRNLIKIITICSSTDF 602 (833)
Q Consensus 529 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~----~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 602 (833)
....|+.+..||+|.||.||+|....+. +.+|+|+++... .+......+|+..++.++||||+.+..++...
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~-- 99 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH-- 99 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc--
Confidence 3457999999999999999999665443 378999997542 23456788999999999999999999887543
Q ss_pred CCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCC----
Q 040925 603 KGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHD---- 678 (833)
Q Consensus 603 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~---- 678 (833)
...+++++||.+. +|.++|+-++.... ..++...+..|++||+.|+.|||+. =|+||||||+|||+..+
T Consensus 100 --d~~v~l~fdYAEh-DL~~II~fHr~~~~-~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgper 172 (438)
T KOG0666|consen 100 --DKKVWLLFDYAEH-DLWHIIKFHRASKA-KQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPER 172 (438)
T ss_pred --CceEEEEehhhhh-hHHHHHHHhccchh-ccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCcc
Confidence 3589999999987 99999987765433 4789999999999999999999999 89999999999999877
Q ss_pred CcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCC-CCcccccccCCcCCCccccC
Q 040925 679 MVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSE-ASMTGDIFTGRRPIDAVFNE 746 (833)
Q Consensus 679 ~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Di~s~~~~~~~~~~~ 746 (833)
|.|||+|||+|+.+..+-. .......++-|.+|+|||.+.|.. |+.+.|||+-||.|.++.+.
T Consensus 173 G~VKIaDlGlaR~~~~plk-----pl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl 236 (438)
T KOG0666|consen 173 GRVKIADLGLARLFNNPLK-----PLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTL 236 (438)
T ss_pred CeeEeecccHHHHhhcccc-----ccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHcc
Confidence 8999999999998765432 222334567899999999988764 99999999988888776543
No 321
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=2.2e-32 Score=297.53 Aligned_cols=268 Identities=20% Similarity=0.288 Sum_probs=215.2
Q ss_pred cchHHHHHHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhc-CCCccceEeeEeec
Q 040925 521 VSYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNI-RHRNLIKIITICSS 599 (833)
Q Consensus 521 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 599 (833)
..++.+...++.|++.+.||.|.+|.||+++.+.+++.+|+|+.... .+..+++..|.++++.. .|||++.+||++.-
T Consensus 9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~-~d~deEiE~eynil~~~~~hpnv~~fyg~~~k 87 (953)
T KOG0587|consen 9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT-EDEEEEIELEYNMLKKYSHHPNVATFYGAFIK 87 (953)
T ss_pred cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC-ccccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence 44555566678899999999999999999999999999999998744 33456788899999998 59999999999987
Q ss_pred CCCCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCC
Q 040925 600 TDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM 679 (833)
Q Consensus 600 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~ 679 (833)
.+....+..|+|||||.+||..|+++...+. .+.|..+..|++.++.|+.+||.. .++|||||-.|||++.++
T Consensus 88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~----rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~ 160 (953)
T KOG0587|consen 88 KDPGNGDQLWLVMEFCGGGSVTDLVKNTKGN----RLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENA 160 (953)
T ss_pred ecCCCCCeEEEEeeccCCccHHHHHhhhccc----chhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccC
Confidence 7766778999999999999999999987643 799999999999999999999999 999999999999999999
Q ss_pred cEEEcccccccccCcccccccccCCCccccccccccccCccccCC-----CCCCcccccccCCcCCCccccCCccHHHHH
Q 040925 680 VAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-----SEASMTGDIFTGRRPIDAVFNEGHSLHEFA 754 (833)
Q Consensus 680 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~ 754 (833)
.|||+|||.+...+.. ..+.....|||.|||||++.- ..|+..+|+|| .|++..|+.
T Consensus 161 ~VKLvDFGvSaQldsT--------~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~Ws----------LGITaIEla 222 (953)
T KOG0587|consen 161 EVKLVDFGVSAQLDST--------VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWS----------LGITAIEMA 222 (953)
T ss_pred cEEEeeeeeeeeeecc--------cccccCcCCCcccccceeeecccCCCCCcccccchhh----------ccceeehhc
Confidence 9999999999866542 333445679999999998642 34778889999 777777877
Q ss_pred HHhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 755 KTALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 755 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.|..|...+.... .+..... .++..-..++...+++.++|..|+.+|-++||++.++++.
T Consensus 223 dG~PPl~DmHPmr--aLF~IpR----NPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 223 EGAPPLCDMHPMR--ALFLIPR----NPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred CCCCCccCcchhh--hhccCCC----CCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 7777754221111 1001111 1112223356678899999999999999999999998754
No 322
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1.9e-33 Score=271.55 Aligned_cols=250 Identities=24% Similarity=0.281 Sum_probs=199.3
Q ss_pred HhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCC
Q 040925 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGT 605 (833)
Q Consensus 529 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 605 (833)
..++|...+.||+|.||+|.+++.+.+++.||+|++++.- +........|-++|+..+||.+..+... |+..
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYs-----FQt~ 240 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYS-----FQTQ 240 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhh-----hccC
Confidence 4568999999999999999999999999999999997542 2334456779999999999999888765 4455
Q ss_pred ceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcc
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 685 (833)
+..|+||||..||.|.-++...+ .+++...+.+...|+.||.|||++ +||.||+|.+|.++|+||.+||+|
T Consensus 241 drlCFVMeyanGGeLf~HLsrer------~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitD 311 (516)
T KOG0690|consen 241 DRLCFVMEYANGGELFFHLSRER------VFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITD 311 (516)
T ss_pred ceEEEEEEEccCceEeeehhhhh------cccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeee
Confidence 59999999999999999998755 789999999999999999999999 999999999999999999999999
Q ss_pred cccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccc
Q 040925 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEI 765 (833)
Q Consensus 686 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~ 765 (833)
||+++.--. .......++|||.|.|||++....|..++|+|- .|+++||++-|.+|+-..+.
T Consensus 312 FGLCKE~I~--------~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG----------~GVVMYEMmCGRLPFyn~dh 373 (516)
T KOG0690|consen 312 FGLCKEEIK--------YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWG----------VGVVMYEMMCGRLPFYNKDH 373 (516)
T ss_pred cccchhccc--------ccceeccccCChhhcCchhhccccccceeehhh----------hhHHHHHHHhccCcccccch
Confidence 999974221 223345689999999999999999999999888 88999999999999753221
Q ss_pred ccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCC-----CHHHHHH
Q 040925 766 VDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERM-----DMRDVVA 819 (833)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~ 819 (833)
....+.+-- ..-..+....++...++...+.+||.+|. .+.||.+
T Consensus 374 ---~kLFeLIl~------ed~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~ 423 (516)
T KOG0690|consen 374 ---EKLFELILM------EDLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMR 423 (516)
T ss_pred ---hHHHHHHHh------hhccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHh
Confidence 111111000 00111223345667888899999999995 3555544
No 323
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.98 E-value=1.8e-32 Score=295.73 Aligned_cols=267 Identities=22% Similarity=0.260 Sum_probs=199.2
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeecc--CCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK--YKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
..+|.+.+.||+|+||.||+|++..+++.||||.++.. .......+.+|+.+++.++||||+++++++.....+....
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 35799999999999999999999999999999998643 2223456788999999999999999999876544333346
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.++||||+. ++|.+++.... .+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg 153 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSSQ------TLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFG 153 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCc
Confidence 899999996 69999987654 689999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIV 766 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~ 766 (833)
+++...... .......++..|+|||++.+ ..++.++|||| +|+++++++++..|+...+..
T Consensus 154 ~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws----------lG~il~~l~~g~~pf~~~~~~ 215 (337)
T cd07858 154 LARTTSEKG--------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWS----------VGCIFAELLGRKPLFPGKDYV 215 (337)
T ss_pred cccccCCCc--------ccccccccccCccChHHHhcCCCCCCcccHHH----------HHHHHHHHHcCCCCCCCCChH
Confidence 998654321 11122458899999998764 46889999999 666777777776665321100
Q ss_pred ---------------------cccchhhhcccc-chhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH--HH
Q 040925 767 ---------------------DPSLLMEVMTNN-SMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK--LC 822 (833)
Q Consensus 767 ---------------------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~--L~ 822 (833)
............ ...........+++++.+.+++.+||+.||++|||++|+++. ++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~ 295 (337)
T cd07858 216 HQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLA 295 (337)
T ss_pred HHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchh
Confidence 000000000000 000000011123456778999999999999999999999887 54
Q ss_pred Hh
Q 040925 823 HT 824 (833)
Q Consensus 823 ~i 824 (833)
.+
T Consensus 296 ~~ 297 (337)
T cd07858 296 SL 297 (337)
T ss_pred hh
Confidence 44
No 324
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.98 E-value=4.4e-32 Score=294.80 Aligned_cols=261 Identities=18% Similarity=0.252 Sum_probs=196.1
Q ss_pred HhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC--CcchhHHHHHHHHHhhcCCCccceEeeEeecCC-CCCC
Q 040925 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVAECEALRNIRHRNLIKIITICSSTD-FKGT 605 (833)
Q Consensus 529 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~ 605 (833)
..++|++.+.||+|+||.||+|.+..+++.||+|.+.... ....+.+.+|+.++++++||||+++++++.... +.+.
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4578999999999999999999999999999999986432 223456788999999999999999999875433 2233
Q ss_pred ceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcc
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 685 (833)
...|+||||++ ++|.+.+.. .+++.++..++.|++.||+|||+. ||+||||||+||+++.++.+||+|
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~--------~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~D 161 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQM--------DLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 161 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhh--------cCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEcc
Confidence 46799999996 588888753 378889999999999999999999 999999999999999999999999
Q ss_pred cccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccc
Q 040925 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEI 765 (833)
Q Consensus 686 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~ 765 (833)
||+++....... .....||+.|+|||++.+..++.++|||| +|+++++++++..|+...+.
T Consensus 162 fg~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Dvws----------lG~~l~~l~~g~~pf~~~~~ 222 (353)
T cd07850 162 FGLARTAGTSFM---------MTPYVVTRYYRAPEVILGMGYKENVDIWS----------VGCIMGEMIRGTVLFPGTDH 222 (353)
T ss_pred CccceeCCCCCC---------CCCCcccccccCHHHHhCCCCCCchhhHh----------HHHHHHHHHHCCCCCCCCCH
Confidence 999986543211 12245889999999999999999999999 67777777777766542211
Q ss_pred ccc-------------cch-------hhhccccc--------------hhhhhhhhchHHHHHHHHHHhhccCCCCCCCC
Q 040925 766 VDP-------------SLL-------MEVMTNNS--------------MIQEDKRVKTEECLNAIIRTGVLCSMESPFER 811 (833)
Q Consensus 766 ~~~-------------~~~-------~~~~~~~~--------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 811 (833)
.+. .+. ........ .............+..+.+++.+||+.||++|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 302 (353)
T cd07850 223 IDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKR 302 (353)
T ss_pred HHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhC
Confidence 000 000 00000000 00000000011235667899999999999999
Q ss_pred CCHHHHHHH
Q 040925 812 MDMRDVVAK 820 (833)
Q Consensus 812 Pt~~eil~~ 820 (833)
||+.|+++.
T Consensus 303 ~t~~eiL~~ 311 (353)
T cd07850 303 ISVDDALQH 311 (353)
T ss_pred cCHHHHhcC
Confidence 999999865
No 325
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.98 E-value=5.5e-32 Score=281.85 Aligned_cols=250 Identities=22% Similarity=0.266 Sum_probs=194.5
Q ss_pred chHHHHHHhcCCccCcee--ccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhc-CCCccceEeeEee
Q 040925 522 SYAELSKATGEFSSSNMI--GQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNI-RHRNLIKIITICS 598 (833)
Q Consensus 522 ~~~~~~~~~~~y~~~~~l--g~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~ 598 (833)
+..+.....++|++.+.+ |+|+||.||++..+.++..+|+|.++...... . |+.....+ +||||+++++++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~---~--e~~~~~~~~~h~~iv~~~~~~~ 79 (267)
T PHA03390 5 SLSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA---I--EPMVHQLMKDNPNFIKLYYSVT 79 (267)
T ss_pred HHHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch---h--hHHHHHHhhcCCCEEEEEEEEe
Confidence 345556667788888887 99999999999999999999999986432111 1 22222222 6999999999976
Q ss_pred cCCCCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCC
Q 040925 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHD 678 (833)
Q Consensus 599 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~ 678 (833)
..+ ..++||||+++|+|.+++.... .+++.+++.++.|+++||.|||+. +++||||||+||+++.+
T Consensus 80 ~~~-----~~~iv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~ 145 (267)
T PHA03390 80 TLK-----GHVLIMDYIKDGDLFDLLKKEG------KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRA 145 (267)
T ss_pred cCC-----eeEEEEEcCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCC
Confidence 654 8999999999999999998654 689999999999999999999999 99999999999999999
Q ss_pred C-cEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHh
Q 040925 679 M-VAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTA 757 (833)
Q Consensus 679 ~-~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~ 757 (833)
+ .++|+|||.+....... ...|+..|+|||++.+..++.++|||| .|+++++++++.
T Consensus 146 ~~~~~l~dfg~~~~~~~~~------------~~~~~~~y~aPE~~~~~~~~~~~Dvws----------lG~il~~l~~g~ 203 (267)
T PHA03390 146 KDRIYLCDYGLCKIIGTPS------------CYDGTLDYFSPEKIKGHNYDVSFDWWA----------VGVLTYELLTGK 203 (267)
T ss_pred CCeEEEecCccceecCCCc------------cCCCCCcccChhhhcCCCCCchhhHHH----------HHHHHHHHHHCC
Confidence 8 99999999987654321 135899999999999888999999999 888999999999
Q ss_pred CCCccccc--ccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCC-HHHHHH
Q 040925 758 LPEKVMEI--VDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMD-MRDVVA 819 (833)
Q Consensus 758 ~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-~~eil~ 819 (833)
.|+..... .+......... .........+..+.+++.+||+.||.+||+ ++|+++
T Consensus 204 ~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 204 HPFKEDEDEELDLESLLKRQQ-------KKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred CCCCCCCcchhhHHHHHHhhc-------ccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 88762211 11111111110 011122245678899999999999999996 588874
No 326
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.98 E-value=2.1e-32 Score=295.01 Aligned_cols=265 Identities=20% Similarity=0.249 Sum_probs=198.3
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC--cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceE
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
++|++.+.||+|++|.||+|....+++.||+|++..... ...+.+.+|+.++++++||||+++++++.... ......
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~~~ 83 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG-ADFKDV 83 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC-CCCceE
Confidence 689999999999999999999999999999999875422 23466788999999999999999999875543 334578
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
++||||+. |+|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~ 153 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQ------PLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGM 153 (334)
T ss_pred EEEEehhh-hhHHHHhccCC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEeccccc
Confidence 99999996 69999987654 689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD 767 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~ 767 (833)
+......... .........|+..|+|||++.+ ..++.++|||| +|+++++++++..|+...+...
T Consensus 154 ~~~~~~~~~~----~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~s----------lG~~l~el~~g~~pf~~~~~~~ 219 (334)
T cd07855 154 ARGLSSSPTE----HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWS----------VGCIFAEMLGRRQLFPGKNYVH 219 (334)
T ss_pred ceeecccCcC----CCcccccccccccccChHHhcCCcccccccchHH----------HHHHHHHHHcCCCccCCCChHH
Confidence 9765432211 1111223468999999998765 45889999999 6777777777776653221100
Q ss_pred c-------------cc--------hhhhcccc-chhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 768 P-------------SL--------LMEVMTNN-SMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 768 ~-------------~~--------~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
. .. ........ ..............+..+.+++.+||+.||++|||+++++..
T Consensus 220 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 220 QLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred HHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0 00 00000000 000000000112346788999999999999999999999875
No 327
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.98 E-value=4.1e-32 Score=287.90 Aligned_cols=267 Identities=20% Similarity=0.254 Sum_probs=195.4
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC--cchhHHHHHHHHHhhcC-CCccceEeeEeecCCCCCCce
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNIR-HRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 607 (833)
++|++.+.||+|+||.||+|.+..+++.||+|.++.... .....+.+|+.+++.++ ||||+++++++...+..+...
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 468999999999999999999998999999999864432 23457888999999995 699999999887655333445
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecC-CCcEEEccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDH-DMVAHVCDF 686 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kL~Df 686 (833)
.++||||+++ ++.+++...... ....+++..++.++.||+.||.|||+. +|+||||||+||+++. ++.+||+||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~df 155 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRG-PGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADL 155 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhccc-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeec
Confidence 8999999985 899888754321 012589999999999999999999999 9999999999999998 889999999
Q ss_pred ccccccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccc
Q 040925 687 GLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEI 765 (833)
Q Consensus 687 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~ 765 (833)
|.++....... ......+++.|+|||++.+ ..++.++|||| +|+++++++++..|+...+.
T Consensus 156 g~~~~~~~~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s----------lG~~l~~l~~g~~~~~~~~~ 217 (295)
T cd07837 156 GLGRAFSIPVK--------SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWS----------VGCIFAEMSRKQPLFPGDSE 217 (295)
T ss_pred ccceecCCCcc--------ccCCcccccCCCChHHhhCCCCCCchHHHHH----------HHHHHHHHHcCCCCCCCCCH
Confidence 99876533211 1112347889999998765 45789999999 77778888877766542111
Q ss_pred ccccc-------------hhhh------ccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 766 VDPSL-------------LMEV------MTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 766 ~~~~~-------------~~~~------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
..... .... ...............+..+..+.+++.+||.+||++|||++|++..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 218 LQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred HHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00000 0000 0000000000011112356778999999999999999999999753
No 328
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.98 E-value=3.3e-32 Score=288.18 Aligned_cols=261 Identities=21% Similarity=0.269 Sum_probs=193.2
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCc--chhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG--ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
.++|++.+.||.|++|.||+|.+..+++.||+|.++..... ....+.+|+.++++++||||+++++++.... ...
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~---~~~ 80 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSN---LDK 80 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecC---CCc
Confidence 35799999999999999999999989999999999754322 2345678999999999999999999876542 248
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.++||||++ ++|.+++..... .+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||
T Consensus 81 ~~lv~e~~~-~~L~~~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g 151 (293)
T cd07843 81 IYMVMEYVE-HDLKSLMETMKQ-----PFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFG 151 (293)
T ss_pred EEEEehhcC-cCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecC
Confidence 999999997 599998876442 589999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCCC-CCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS-EASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIV 766 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~ 766 (833)
.+........ ......+++.|+|||++.+. .++.++|||| .|++++++.++..|+......
T Consensus 152 ~~~~~~~~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s----------lG~~l~~l~~g~~~f~~~~~~ 213 (293)
T cd07843 152 LAREYGSPLK--------PYTQLVVTLWYRAPELLLGAKEYSTAIDMWS----------VGCIFAELLTKKPLFPGKSEI 213 (293)
T ss_pred ceeeccCCcc--------ccccccccccccCchhhcCCccccchhhHHH----------HHHHHHHHHhCCCCCCCCChH
Confidence 9986654321 11123578999999987654 4688999999 666677777766655321110
Q ss_pred cccc-------------hh---h--hcc-c---cchhhhhhhhchHH-HHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 767 DPSL-------------LM---E--VMT-N---NSMIQEDKRVKTEE-CLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 767 ~~~~-------------~~---~--~~~-~---~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
+... .. . ... . ...........+.. ..+.+.+++.+||+.||++|||+.|+++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 214 DQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred HHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0000 00 0 000 0 00000000001111 35678899999999999999999999863
No 329
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.98 E-value=2.3e-32 Score=283.65 Aligned_cols=251 Identities=20% Similarity=0.294 Sum_probs=197.9
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccC--CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
+|++.+.||+|++|.||+|....++..||+|.+.... ....+.+.+|+.++++++|+||+++++++.... ..+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~-----~~~ 75 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENG-----RLF 75 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCC-----eEE
Confidence 5888999999999999999999899999999986532 223457889999999999999999999875544 899
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCC-cEEEccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVCDFGL 688 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kL~DfG~ 688 (833)
+||||+++++|.+++...... .+++..+..++.|++.||+|||+. +++|+||||+||++++++ .+||+|||.
T Consensus 76 lv~e~~~~~~L~~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~ 148 (257)
T cd08225 76 IVMEYCDGGDLMKRINRQRGV----LFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGI 148 (257)
T ss_pred EEEecCCCCcHHHHHHhccCC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEeccccc
Confidence 999999999999999764422 578999999999999999999999 999999999999999886 579999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccc
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDP 768 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~ 768 (833)
+........ ......|++.|+|||+..+..++.++|+|| +|+++++++++..|+..... .
T Consensus 149 ~~~~~~~~~--------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~s----------lG~il~~l~~g~~p~~~~~~--~ 208 (257)
T cd08225 149 ARQLNDSME--------LAYTCVGTPYYLSPEICQNRPYNNKTDIWS----------LGCVLYELCTLKHPFEGNNL--H 208 (257)
T ss_pred chhccCCcc--------cccccCCCccccCHHHHcCCCCCchhhHHH----------HHHHHHHHHhCCCCCCCccH--H
Confidence 876543211 111235899999999988888999999999 78888888888888652211 1
Q ss_pred cchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 769 SLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
........... .......+..+.+++.+||..+|++|||+.|+++.
T Consensus 209 ~~~~~~~~~~~------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 209 QLVLKICQGYF------APISPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred HHHHHHhcccC------CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 11111111100 01112345678899999999999999999999763
No 330
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.98 E-value=5.1e-32 Score=285.68 Aligned_cols=255 Identities=24% Similarity=0.313 Sum_probs=204.0
Q ss_pred HHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 528 KATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 528 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
...+.|++.+.||+|++|.||+|.+..++..||+|+++.... ..+.+.+|++.+++++|+||+++++++.... .
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~ 89 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGD-----E 89 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECC-----E
Confidence 345678899999999999999999988899999999975543 4567889999999999999999999976654 8
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.++||||+++++|.+++.... ..+++..+..++.|++.||+|||+. |++|+||+|+||+++.++.++|+|||
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~-----~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~ 161 (286)
T cd06614 90 LWVVMEYMDGGSLTDIITQNF-----VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFG 161 (286)
T ss_pred EEEEEeccCCCcHHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccc
Confidence 999999999999999998754 1589999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD 767 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~ 767 (833)
.+........ ......+++.|+|||++.+..++.++|+|| +|+++++++++..|+.......
T Consensus 162 ~~~~~~~~~~--------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~s----------lGvil~~l~~g~~p~~~~~~~~ 223 (286)
T cd06614 162 FAAQLTKEKS--------KRNSVVGTPYWMAPEVIKRKDYGPKVDIWS----------LGIMCIEMAEGEPPYLREPPLR 223 (286)
T ss_pred hhhhhccchh--------hhccccCCcccCCHhHhcCCCCCCccccHH----------HHHHHHHHHhCCCCCCCCCHHH
Confidence 8875543211 112245889999999998888999999999 8888999999888865222111
Q ss_pred ccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 768 PSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
. ......... ........++..+.+++.+||+.+|.+|||+.++++.
T Consensus 224 ~--~~~~~~~~~----~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 224 A--LFLITTKGI----PPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred H--HHHHHhcCC----CCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 0 000000000 0111122356788999999999999999999999864
No 331
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.98 E-value=4e-34 Score=266.99 Aligned_cols=276 Identities=21% Similarity=0.323 Sum_probs=202.3
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeec--cCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCC---CC
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINL--KYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFK---GT 605 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~---~~ 605 (833)
+.|+...+||+|.||+||+|+.+.+++.||+|++-. +..+......+|++++..++|+|++.++.+|....-. ..
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 457778899999999999999999999999987632 2233456678999999999999999999988664322 23
Q ss_pred ceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcc
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 685 (833)
...|+||.+|+. +|..++..... +++..++.+++.+++.||.|+|+. .|+|||+||+|++|+.+|.+||+|
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn~~v-----r~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklAD 167 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSNRKV-----RFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLAD 167 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcCccc-----cccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeec
Confidence 358999999986 99999987542 689999999999999999999999 999999999999999999999999
Q ss_pred cccccccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCccccCCccH-----------HHH
Q 040925 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFNEGHSL-----------HEF 753 (833)
Q Consensus 686 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~~g~~l-----------~~~ 753 (833)
||+|+.+....... ..+.+..+-|.+|++||.+.| ..|+++.|||..+|.+.++|....++ ...
T Consensus 168 FGlar~fs~~~n~~----kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~ 243 (376)
T KOG0669|consen 168 FGLARAFSTSKNVV----KPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQ 243 (376)
T ss_pred cccccceecccccC----CCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHH
Confidence 99998765443221 122344567999999998776 46999999999999998888754322 112
Q ss_pred HHHhCCCcccccccccchhhhccccchhhhhhhhchHHHH------HHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 754 AKTALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECL------NAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 754 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
+-|....+.+..+|.--..+.+..... ........++.. +...+++..++..||.+||++++++..
T Consensus 244 LcGs~tkevWP~~d~lpL~~sie~ePl-~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 244 LCGSITKEVWPNVDNLPLYQSIELEPL-PKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred HhccCCcccCCCcccchHHHhccCCCC-CcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 223333333333333222222211100 000001111111 256788999999999999999999765
No 332
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.98 E-value=6.7e-32 Score=280.93 Aligned_cols=243 Identities=24% Similarity=0.291 Sum_probs=193.3
Q ss_pred eccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEEEec
Q 040925 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYM 615 (833)
Q Consensus 539 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 615 (833)
||.|++|.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++.... ..++||||+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~~ 75 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKK-----YIYMLMEYC 75 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCC-----ccEEEEecC
Confidence 699999999999999889999999996432 233467899999999999999999999875544 789999999
Q ss_pred CCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccCcc
Q 040925 616 ENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDH 695 (833)
Q Consensus 616 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 695 (833)
++++|.+++.... .+++..+..++.|++.||+|||+. +++|+||||+||+++.++.+||+|||++......
T Consensus 76 ~~~~L~~~l~~~~------~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~ 146 (262)
T cd05572 76 LGGELWTILRDRG------LFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSG 146 (262)
T ss_pred CCCcHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCcc
Confidence 9999999997654 588999999999999999999999 9999999999999999999999999999866443
Q ss_pred cccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchhhhc
Q 040925 696 QLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVM 775 (833)
Q Consensus 696 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~~~~ 775 (833)
. ......|++.|+|||.+.+..++.++|+|+ .|+++++++++..|+...+...........
T Consensus 147 ~---------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s----------lG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 207 (262)
T cd05572 147 Q---------KTWTFCGTPEYVAPEIILNKGYDFSVDYWS----------LGILLYELLTGRPPFGEDDEDPMEIYNDIL 207 (262)
T ss_pred c---------ccccccCCcCccChhHhcCCCCCChhhhhh----------hHHHHHHHHhCCCCcCCCCCCHHHHHHHHh
Confidence 2 111235889999999988888999999999 888899999998887633311111111111
Q ss_pred cccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCC-----HHHHHH
Q 040925 776 TNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMD-----MRDVVA 819 (833)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~eil~ 819 (833)
.... ....+...++.+.+++.+||..||++||+ ++|+++
T Consensus 208 ~~~~-----~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 208 KGNG-----KLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred ccCC-----CCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 0000 01112223567899999999999999999 777765
No 333
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.98 E-value=6.2e-32 Score=289.64 Aligned_cols=266 Identities=20% Similarity=0.243 Sum_probs=194.5
Q ss_pred CCccCceeccCcceEEEEEEECC--CceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCc
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGE--DEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTD 606 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 606 (833)
+|++.+.||+|++|.||+|.+.. +++.||+|.+.... ....+.+.+|+.++++++||||+++++++.... ..
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---~~ 77 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHA---DK 77 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCC---Cc
Confidence 48889999999999999999987 78999999997532 334467888999999999999999999986542 24
Q ss_pred eEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecC----CCcEE
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDH----DMVAH 682 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~----~~~~k 682 (833)
..++||||+++ ++.+++....... ...+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+|
T Consensus 78 ~~~lv~e~~~~-~l~~~~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~k 152 (316)
T cd07842 78 SVYLLFDYAEH-DLWQIIKFHRQAK-RVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVK 152 (316)
T ss_pred eEEEEEeCCCc-CHHHHHHhhccCC-CcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEE
Confidence 79999999975 7877775433211 12588999999999999999999999 9999999999999999 89999
Q ss_pred EcccccccccCcccccccccCCCccccccccccccCccccCCC-CCCcccccccCCcCCCccccCCccHHHHHHHhCCCc
Q 040925 683 VCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS-EASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEK 761 (833)
Q Consensus 683 L~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~ 761 (833)
|+|||++......... ........+|+.|+|||++.+. .++.++|||| +|+++++++++..|+.
T Consensus 153 l~Dfg~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~s----------lG~~l~~l~~~~~~~~ 217 (316)
T cd07842 153 IGDLGLARLFNAPLKP-----LADLDPVVVTIWYRAPELLLGARHYTKAIDIWA----------IGCIFAELLTLEPIFK 217 (316)
T ss_pred ECCCccccccCCCccc-----ccccCCccccccccCHHHHhCCCCCCcHHHHHH----------HHHHHHHHHhcCCCCc
Confidence 9999999866443211 1112235689999999987664 5789999999 7777888888777654
Q ss_pred cccccc----c----------------------------cchh---hhccccchhhhhhhhchH--HHHHHHHHHhhccC
Q 040925 762 VMEIVD----P----------------------------SLLM---EVMTNNSMIQEDKRVKTE--ECLNAIIRTGVLCS 804 (833)
Q Consensus 762 ~~~~~~----~----------------------------~~~~---~~~~~~~~~~~~~~~~~~--~~~~~l~~li~~cl 804 (833)
...... + .... .................. .....+.+++.+|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 297 (316)
T cd07842 218 GREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLL 297 (316)
T ss_pred CCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHh
Confidence 221111 0 0000 000000000000000000 23456889999999
Q ss_pred CCCCCCCCCHHHHHHH
Q 040925 805 MESPFERMDMRDVVAK 820 (833)
Q Consensus 805 ~~dP~~RPt~~eil~~ 820 (833)
+.||++|||+.|+++.
T Consensus 298 ~~~P~~Rps~~eil~~ 313 (316)
T cd07842 298 EYDPTKRITAEEALEH 313 (316)
T ss_pred cCCcccCcCHHHHhcC
Confidence 9999999999999753
No 334
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.98 E-value=4.1e-32 Score=286.03 Aligned_cols=256 Identities=23% Similarity=0.313 Sum_probs=192.8
Q ss_pred CccCceeccCcceEEEEEEECCCceEEEEEEeeccC--CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeE
Q 040925 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAF 610 (833)
Q Consensus 533 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 610 (833)
|++.+.||.|++|.||+|.+..+|..||+|++.... ....+.+.+|++++++++|||++++++++... ...++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~-----~~~~i 75 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSE-----NKLYL 75 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccC-----CeEEE
Confidence 678899999999999999998899999999987543 22335688899999999999999999997654 48999
Q ss_pred EEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccc
Q 040925 611 VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690 (833)
Q Consensus 611 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 690 (833)
+|||++ ++|.+++...... .+++..++.++.|+++||+|||+. +++||||+|+||+++.++.++|+|||.+.
T Consensus 76 v~e~~~-~~l~~~~~~~~~~----~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~ 147 (283)
T cd07835 76 VFEFLD-LDLKKYMDSSPLT----GLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLAR 147 (283)
T ss_pred EEeccC-cCHHHHHhhCCCC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeeccccc
Confidence 999995 6999998765421 589999999999999999999999 99999999999999999999999999997
Q ss_pred ccCcccccccccCCCccccccccccccCccccCCC-CCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccccc
Q 040925 691 FLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS-EASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPS 769 (833)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~ 769 (833)
....... ......+++.|+|||++.+. .++.++|||| +|+++++++++..|+...+..+..
T Consensus 148 ~~~~~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s----------lG~~l~~l~~g~~pf~~~~~~~~~ 209 (283)
T cd07835 148 AFGVPVR--------TYTHEVVTLWYRAPEILLGSRQYSTPVDIWS----------IGCIFAEMVNRRPLFPGDSEIDQL 209 (283)
T ss_pred ccCCCcc--------ccCccccccCCCCCceeecCcccCcHHHHHH----------HHHHHHHHHhCCCCCCCCCHHHHH
Confidence 5533211 01123478899999987654 5788999999 788888888887775422111000
Q ss_pred ch--h-----------------hhccc-cchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 770 LL--M-----------------EVMTN-NSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 770 ~~--~-----------------~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
.. . +.... ...............+..+.+++.+||+.||++|||++|+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 210 FRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred HHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 00 0 00000 000000001111223467889999999999999999999975
No 335
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.98 E-value=2.1e-32 Score=289.00 Aligned_cols=255 Identities=22% Similarity=0.287 Sum_probs=191.4
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC-cchhHHHHHHHHHhhcC-CCccceEeeEeecCCCCCCceEe
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIR-HRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
+|...+.||+|+||.||++.+..+++.||+|.+..... .....+.+|+.++.++. ||||+++++++.... ..+
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~-----~~~ 79 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREG-----DCW 79 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCC-----cEE
Confidence 56677899999999999999999999999999874432 33457889999999996 999999999875543 788
Q ss_pred EEEEecCCCChhhhhc---cCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccc
Q 040925 610 FVFEYMENGSLKDWLH---QSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDF 686 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~---~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 686 (833)
++|||++ +++.++.. .... ..+++..+..++.|++.||+|||+.. +++||||||+||+++.++.+||+||
T Consensus 80 ~~~e~~~-~~l~~l~~~~~~~~~----~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~df 152 (288)
T cd06616 80 ICMELMD-ISLDKFYKYVYEVLK----SVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDF 152 (288)
T ss_pred EEEeccc-CCHHHHHHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeec
Confidence 9999986 46655432 2111 16899999999999999999999742 8999999999999999999999999
Q ss_pred ccccccCcccccccccCCCccccccccccccCccccCCC---CCCcccccccCCcCCCccccCCccHHHHHHHhCCCccc
Q 040925 687 GLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS---EASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVM 763 (833)
Q Consensus 687 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~ 763 (833)
|+++....... .....|++.|+|||++.+. .++.++|||| +|+++++++++..|+...
T Consensus 153 g~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~s----------lG~il~el~~g~~p~~~~ 213 (288)
T cd06616 153 GISGQLVDSIA---------KTRDAGCRPYMAPERIDPSARDGYDVRSDVWS----------LGITLYEVATGKFPYPKW 213 (288)
T ss_pred chhHHhccCCc---------cccccCccCccCHHHhccccccCCcchhhhhH----------HHHHHHHHHhCCCCchhc
Confidence 99976543211 1123589999999998766 6899999999 788888888888886532
Q ss_pred ccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 764 EIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
..... .......... ..........++..+.+++.+||+.||++|||+++|++.
T Consensus 214 ~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 214 NSVFD-QLTQVVKGDP--PILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred chHHH-HHhhhcCCCC--CcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 21000 0011111000 000011112356788999999999999999999999875
No 336
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.98 E-value=7.4e-32 Score=280.84 Aligned_cols=254 Identities=20% Similarity=0.265 Sum_probs=199.1
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC-----CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCC
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY-----KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGT 605 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 605 (833)
.+|++.+.||+|++|.||+|++..+++.||+|.+.... ......+.+|++++++++||||+++++++.+.. .
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~---~ 78 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPE---E 78 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCC---C
Confidence 47899999999999999999999899999999875321 223457889999999999999999999875432 3
Q ss_pred ceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcc
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 685 (833)
...++||||+++++|.+++.... .+++..++.++.|++.||.|||+. +++|+||||+||+++.++.++|+|
T Consensus 79 ~~~~~v~e~~~~~~L~~~~~~~~------~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~d 149 (264)
T cd06653 79 KKLSIFVEYMPGGSIKDQLKAYG------ALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGD 149 (264)
T ss_pred CEEEEEEEeCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECc
Confidence 46889999999999999987643 578999999999999999999999 999999999999999999999999
Q ss_pred cccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccc
Q 040925 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEI 765 (833)
Q Consensus 686 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~ 765 (833)
||+++........ ........|+..|+|||++.+..++.++|+|| +|+++++++++..|+.....
T Consensus 150 fg~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s----------lG~il~~l~~g~~p~~~~~~ 214 (264)
T cd06653 150 FGASKRIQTICMS-----GTGIKSVTGTPYWMSPEVISGEGYGRKADVWS----------VACTVVEMLTEKPPWAEYEA 214 (264)
T ss_pred ccccccccccccc-----CccccccCCcccccCHhhhcCCCCCccccHHH----------HHHHHHHHHhCCCCCCccCH
Confidence 9999865332110 01112346899999999998888999999999 88889999999888753211
Q ss_pred ccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 766 VDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
.. ...... ..+.....+....+.+.+++.+||. +|..|||+.+++.
T Consensus 215 ~~--~~~~~~-----~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 215 MA--AIFKIA-----TQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred HH--HHHHHH-----cCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 11 000000 0111112234456778999999999 5799999998875
No 337
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.98 E-value=8.7e-32 Score=287.15 Aligned_cols=261 Identities=24% Similarity=0.290 Sum_probs=193.1
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCc--chhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG--ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
.++|++.+.||+|+||.||+|.+..+++.||+|+++..... ....+.+|++++++++|+||+++++++.... ...
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~~~ 82 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKH---LDS 82 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCC---CCe
Confidence 46799999999999999999999989999999999754322 2335678999999999999999999875432 236
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.++||||++ ++|.+++.... ..+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||
T Consensus 83 ~~lv~e~~~-~~l~~~l~~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg 153 (309)
T cd07845 83 IFLVMEYCE-QDLASLLDNMP-----TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFG 153 (309)
T ss_pred EEEEEecCC-CCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccc
Confidence 899999997 48988887543 1689999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIV 766 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~ 766 (833)
.+........ ......+++.|+|||++.+ ..++.++|||| .|+++++++++..|+......
T Consensus 154 ~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dvws----------lG~il~el~~g~~~f~~~~~~ 215 (309)
T cd07845 154 LARTYGLPAK--------PMTPKVVTLWYRAPELLLGCTTYTTAIDMWA----------VGCILAELLAHKPLLPGKSEI 215 (309)
T ss_pred eeeecCCccC--------CCCcccccccccChhhhcCCCCcCchHHHHH----------HHHHHHHHHhCCCCCCCCCHH
Confidence 9986643211 1112246888999998765 45789999999 677777777777665311110
Q ss_pred cc-------------cchhhhc---c-ccchhh----hhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 767 DP-------------SLLMEVM---T-NNSMIQ----EDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 767 ~~-------------~~~~~~~---~-~~~~~~----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
+. ....... . ...... ..........++.+.+++.+|+..||++|||++|+++.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 216 EQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred HHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00 0000000 0 000000 00000011235677899999999999999999999864
No 338
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.98 E-value=1.2e-31 Score=286.71 Aligned_cols=268 Identities=22% Similarity=0.319 Sum_probs=192.3
Q ss_pred HhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC--cchhHHHHHHHHHhhcCCCccceEeeEeecCCCC---
Q 040925 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNIRHRNLIKIITICSSTDFK--- 603 (833)
Q Consensus 529 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--- 603 (833)
..++|++.+.||+|+||.||+|....+++.||||.+..... .....+.+|++++++++||||+++++++......
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 45689999999999999999999999999999999864322 2234567899999999999999999998665321
Q ss_pred CCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEE
Q 040925 604 GTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683 (833)
Q Consensus 604 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 683 (833)
.....++||||++ +++.+++..... .+++.+++.++.|++.||+|||+. +++|+||||+||+++.++.+||
T Consensus 90 ~~~~~~lv~e~~~-~~l~~~l~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl 160 (310)
T cd07865 90 YKGSFYLVFEFCE-HDLAGLLSNKNV-----KFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKL 160 (310)
T ss_pred CCceEEEEEcCCC-cCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEE
Confidence 2345799999996 588888865431 589999999999999999999999 9999999999999999999999
Q ss_pred cccccccccCcccccccccCCCccccccccccccCccccCCC-CCCcccccccCCcCCCccccCCccHHHHHHHhCCCcc
Q 040925 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS-EASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKV 762 (833)
Q Consensus 684 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~ 762 (833)
+|||++.......... ........++..|+|||++.+. .++.++|||| +|++++++.++..++..
T Consensus 161 ~dfg~~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s----------lG~~l~el~t~~~~~~~ 226 (310)
T cd07865 161 ADFGLARAFSLSKNSK----PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWG----------AGCIMAEMWTRSPIMQG 226 (310)
T ss_pred CcCCCcccccCCcccC----CCCccCcccCccccCcHHhcCCcccCchhhhHH----------HHHHHHHHHhCCCCCCC
Confidence 9999998664432111 1111234578999999987664 4788999999 66666676666555431
Q ss_pred cccc-------------cccchhhh----ccccchhhh------hhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 763 MEIV-------------DPSLLMEV----MTNNSMIQE------DKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 763 ~~~~-------------~~~~~~~~----~~~~~~~~~------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
.+.. .+...... ......... ..+....-....+.+++.+||..||++|||++|+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 227 NTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred CCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 1100 00000000 000000000 000000011345678999999999999999999975
No 339
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.97 E-value=4.7e-32 Score=286.05 Aligned_cols=246 Identities=22% Similarity=0.295 Sum_probs=194.3
Q ss_pred CceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEEEec
Q 040925 536 SNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYM 615 (833)
Q Consensus 536 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 615 (833)
...||+|++|.||+|....+++.||+|++..........+.+|+.+++.++|+||+++++++...+ ..++||||+
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~e~~ 99 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD-----ELWVVMEFL 99 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCC-----EEEEEEecC
Confidence 468999999999999999899999999986544445567899999999999999999999976554 899999999
Q ss_pred CCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccCcc
Q 040925 616 ENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDH 695 (833)
Q Consensus 616 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 695 (833)
++++|.+++... .+++..+..++.|++.|++|||+. |++||||||+||+++.++.++|+|||.+......
T Consensus 100 ~~~~L~~~~~~~-------~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~ 169 (292)
T cd06657 100 EGGALTDIVTHT-------RMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 169 (292)
T ss_pred CCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceecccc
Confidence 999999987543 578999999999999999999999 9999999999999999999999999998755432
Q ss_pred cccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchhhhc
Q 040925 696 QLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVM 775 (833)
Q Consensus 696 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~~~~ 775 (833)
.. ......|++.|+|||+..+..++.++|+|| .|+++++++++..|+........ ....
T Consensus 170 ~~--------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~s----------lGvil~el~tg~~p~~~~~~~~~---~~~~ 228 (292)
T cd06657 170 VP--------RRKSLVGTPYWMAPELISRLPYGPEVDIWS----------LGIMVIEMVDGEPPYFNEPPLKA---MKMI 228 (292)
T ss_pred cc--------cccccccCccccCHHHhcCCCCCchhhHHH----------HHHHHHHHHhCCCCCCCCCHHHH---HHHH
Confidence 11 112245899999999988888899999999 78888899988887642211100 0000
Q ss_pred cccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 776 TNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.... +.........+..+.+++.+||..||.+||++.++++.
T Consensus 229 ~~~~---~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 229 RDNL---PPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred HhhC---CcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 0000 00000112235567889999999999999999999874
No 340
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.97 E-value=8.8e-32 Score=278.70 Aligned_cols=248 Identities=27% Similarity=0.408 Sum_probs=199.8
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC--cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
+|++.+.||+|++|.||+|++..+++.||+|.+..... ...+.+.+|++++++++|||++++++++.... ..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~ 75 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSD-----SLY 75 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCC-----EEE
Confidence 58889999999999999999988899999999975543 34567899999999999999999999976544 889
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||+++++|.+++.... .+++..+..++.|++.|+.|||+. ||+||||||+||+++.++.+||+|||.+
T Consensus 76 ~v~e~~~~~~L~~~~~~~~------~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~ 146 (254)
T cd06627 76 IILEYAENGSLRQIIKKFG------PFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVA 146 (254)
T ss_pred EEEecCCCCcHHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccc
Confidence 9999999999999997653 689999999999999999999999 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPS 769 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~ 769 (833)
......... .....|+..|+|||...+..++.++|||+ .|+++++++++..|+...... .
T Consensus 147 ~~~~~~~~~--------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~----------lG~~l~~l~~g~~p~~~~~~~--~ 206 (254)
T cd06627 147 TKLNDVSKD--------DASVVGTPYWMAPEVIEMSGASTASDIWS----------LGCTVIELLTGNPPYYDLNPM--A 206 (254)
T ss_pred eecCCCccc--------ccccccchhhcCHhhhcCCCCCcchhHHH----------HHHHHHHHHhCCCCCCCccHH--H
Confidence 876543211 12245899999999988878899999999 788888888888776422211 0
Q ss_pred chhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 770 LLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
......... ....+...+..+.+++.+||..+|++|||+.+++.
T Consensus 207 ~~~~~~~~~------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 207 ALFRIVQDD------HPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred HHHHHhccC------CCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 000000000 01112234567889999999999999999999875
No 341
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.97 E-value=1.2e-31 Score=282.83 Aligned_cols=258 Identities=21% Similarity=0.277 Sum_probs=194.3
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeE
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAF 610 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 610 (833)
+|++.+.||.|++|.||+|++..+++.||||.++.... ...+.+.+|++++++++||||+++++++...+ ..++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~l 75 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTEN-----KLML 75 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCC-----cEEE
Confidence 58899999999999999999998999999999975533 23456788999999999999999999976654 7899
Q ss_pred EEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccc
Q 040925 611 VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690 (833)
Q Consensus 611 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 690 (833)
||||+++ +|.+++..... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||.+.
T Consensus 76 v~e~~~~-~l~~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~ 148 (284)
T cd07836 76 VFEYMDK-DLKKYMDTHGV---RGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLAR 148 (284)
T ss_pred EEecCCc-cHHHHHHhcCC---CCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhh
Confidence 9999985 89998875432 12589999999999999999999999 99999999999999999999999999997
Q ss_pred ccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc--
Q 040925 691 FLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD-- 767 (833)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~-- 767 (833)
....... ......+++.|+|||++.+ ..++.++|||+ +|+++++++++..|+...+..+
T Consensus 149 ~~~~~~~--------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~s----------lG~~l~~l~~g~~~~~~~~~~~~~ 210 (284)
T cd07836 149 AFGIPVN--------TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWS----------VGCIMAEMITGRPLFPGTNNEDQL 210 (284)
T ss_pred hhcCCcc--------ccccccccccccChHHhcCCCCCCcHHHHHH----------HHHHHHHHHhCCCCCCCCCcHHHH
Confidence 5533211 1112357899999998765 45788999999 7778888888877654221100
Q ss_pred -----------ccchhhhcc-----ccch--hhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 768 -----------PSLLMEVMT-----NNSM--IQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 768 -----------~~~~~~~~~-----~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
......... .... .........+..+..+.+++.+|++.||++||++.|+++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 211 LKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred HHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000000000 0000 000000111234567889999999999999999999975
No 342
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.97 E-value=9.7e-32 Score=282.03 Aligned_cols=244 Identities=23% Similarity=0.282 Sum_probs=190.3
Q ss_pred eccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEEEec
Q 040925 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYM 615 (833)
Q Consensus 539 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 615 (833)
||+|+||+||+|.+..+++.||+|.+.... ......+.+|++++++++||||+++++++...+ ..|+||||+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~lv~e~~ 75 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKD-----DLCLVMTLM 75 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCC-----eEEEEEecC
Confidence 689999999999999899999999986432 223445678999999999999999999865544 889999999
Q ss_pred CCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccCcc
Q 040925 616 ENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDH 695 (833)
Q Consensus 616 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 695 (833)
++++|.+++...... .+++.++..++.|++.||.|||+. +++||||+|+||+++.++.+||+|||.+......
T Consensus 76 ~~~~L~~~l~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~ 148 (277)
T cd05577 76 NGGDLKYHIYNVGEP----GFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG 148 (277)
T ss_pred CCCcHHHHHHHcCcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccC
Confidence 999999999765432 589999999999999999999999 9999999999999999999999999998765431
Q ss_pred cccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccc-ccccchhhh
Q 040925 696 QLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEI-VDPSLLMEV 774 (833)
Q Consensus 696 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~-~~~~~~~~~ 774 (833)
.. .....++..|+|||++.+..++.++|||| .|+++++++++..|+..... .........
T Consensus 149 ~~---------~~~~~~~~~y~~PE~~~~~~~~~~~Di~s----------lG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 209 (277)
T cd05577 149 KK---------IKGRAGTPGYMAPEVLQGEVYDFSVDWFA----------LGCTLYEMIAGRSPFRQRKEKVEKEELKRR 209 (277)
T ss_pred Cc---------cccccCCCCcCCHHHhcCCCCCchhhhHH----------HHHHHHHHhhCCCCCCCCcccccHHHHHhc
Confidence 11 11235788999999998888999999999 78889999999888753221 111110000
Q ss_pred ccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCC-----CHHHHHH
Q 040925 775 MTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERM-----DMRDVVA 819 (833)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~ 819 (833)
... .....+..+++.+.+++.+||+.||++|| ++.++++
T Consensus 210 ~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 210 TLE------MAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred ccc------ccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 000 01111223466788999999999999999 6666654
No 343
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.97 E-value=1.1e-31 Score=278.63 Aligned_cols=253 Identities=22% Similarity=0.334 Sum_probs=201.7
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC--cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
+|++.+.||+|++|.||+|.+..++..||+|++..... ...+.+.+|++++++++|||++++++.+... ...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~-----~~~~ 75 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEK-----GKLC 75 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecC-----CEEE
Confidence 58889999999999999999988899999999975433 3456789999999999999999999986554 4899
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||+++++|.+++...... ...+++.++..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||.+
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~ 150 (258)
T cd08215 76 IVMEYADGGDLSQKIKKQKKE--GKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGIS 150 (258)
T ss_pred EEEEecCCCcHHHHHHHhhcc--CCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccce
Confidence 999999999999999875311 12689999999999999999999999 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPS 769 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~ 769 (833)
........ ......|++.|+|||...+..++.++|+|| .|..++++.++..|+...+. +.
T Consensus 151 ~~~~~~~~--------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~s----------lG~~~~~l~~g~~p~~~~~~--~~ 210 (258)
T cd08215 151 KVLSSTVD--------LAKTVVGTPYYLSPELCQNKPYNYKSDIWS----------LGCVLYELCTLKHPFEGENL--LE 210 (258)
T ss_pred eecccCcc--------eecceeeeecccChhHhccCCCCccccHHH----------HHHHHHHHHcCCCCCCCCcH--HH
Confidence 76544321 111245899999999988888999999999 77788888888777653321 11
Q ss_pred chhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 770 LLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.......... ...+..++..+.+++.+||..+|++|||+.|+++.
T Consensus 211 ~~~~~~~~~~------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 211 LALKILKGQY------PPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred HHHHHhcCCC------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1111111110 11122345678999999999999999999999863
No 344
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.97 E-value=1.1e-31 Score=277.60 Aligned_cols=250 Identities=27% Similarity=0.380 Sum_probs=201.5
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEE
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFV 611 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 611 (833)
+|+..+.||+|++|.||+|.+..+++.||+|+++.......+.+.+|++++++++||+|+++++++.... ..+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~l~ 75 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKD-----ELWIV 75 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-----eEEEE
Confidence 4888899999999999999998889999999997655445678999999999999999999999876554 78999
Q ss_pred EEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccc
Q 040925 612 FEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKF 691 (833)
Q Consensus 612 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 691 (833)
|||+++++|.+++..... .+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||.+..
T Consensus 76 ~e~~~~~~L~~~~~~~~~-----~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~ 147 (253)
T cd05122 76 MEFCSGGSLKDLLKSTNQ-----TLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQ 147 (253)
T ss_pred EecCCCCcHHHHHhhcCC-----CCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccc
Confidence 999999999999877531 689999999999999999999998 999999999999999999999999999986
Q ss_pred cCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccch
Q 040925 692 LSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLL 771 (833)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~ 771 (833)
...... .....|+..|+|||++.+..++.++|+|| +|.++++++++..|+...+.......
T Consensus 148 ~~~~~~---------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~s----------lG~il~~l~~g~~p~~~~~~~~~~~~ 208 (253)
T cd05122 148 LSDTKA---------RNTMVGTPYWMAPEVINGKPYDYKADIWS----------LGITAIELAEGKPPYSELPPMKALFK 208 (253)
T ss_pred cccccc---------ccceecCCcccCHHHHcCCCCCccccHHH----------HHHHHHHHHhCCCCCCCCchHHHHHH
Confidence 654321 12345889999999998888999999999 78889999998887653321111000
Q ss_pred hhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 772 MEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
. ..... ........++..+.+++.+||..||++|||+.|+++
T Consensus 209 ~--~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 209 I--ATNGP----PGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred H--HhcCC----CCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0 00000 001111113567899999999999999999999976
No 345
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.97 E-value=1.4e-31 Score=287.84 Aligned_cols=259 Identities=17% Similarity=0.234 Sum_probs=187.0
Q ss_pred ceeccC--cceEEEEEEECCCceEEEEEEeeccCC--cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEE
Q 040925 537 NMIGQG--SFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVF 612 (833)
Q Consensus 537 ~~lg~G--~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 612 (833)
..||+| +||+||+|++..+++.||+|++..... ...+.+.+|+.+++.++||||+++++++...+ ..++||
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~-----~~~~v~ 78 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGS-----WLWVIS 78 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCC-----ceEEEE
Confidence 456666 899999999998999999999875432 23467889999999999999999999976554 789999
Q ss_pred EecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccccc
Q 040925 613 EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL 692 (833)
Q Consensus 613 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 692 (833)
||+++|++.+++...... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|++|||.+...
T Consensus 79 e~~~~~~l~~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~ 151 (328)
T cd08226 79 PFMAYGSANSLLKTYFPE----GMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSL 151 (328)
T ss_pred ecccCCCHHHHHHhhccc----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhh
Confidence 999999999998865422 588999999999999999999999 9999999999999999999999999865433
Q ss_pred CcccccccccCCCccccccccccccCccccCCC--CCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccc
Q 040925 693 SDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS--EASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSL 770 (833)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~ 770 (833)
......... .........++..|||||++.+. .++.++|||| +|+++++++++..|+...... ..
T Consensus 152 ~~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws----------lG~~l~el~~g~~p~~~~~~~--~~ 218 (328)
T cd08226 152 VRNGQKAKV-VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYS----------VGITACELATGRVPFQDMLRT--QM 218 (328)
T ss_pred hccCccccc-cccccccccCccCccChhhhcCCCCCCCchhhHHH----------HHHHHHHHHhCCCCCCCcChH--HH
Confidence 221110000 00001112356779999998763 4789999999 666667777766665311100 00
Q ss_pred hhhhccc----------------------------------------cchhhhhhhhchHHHHHHHHHHhhccCCCCCCC
Q 040925 771 LMEVMTN----------------------------------------NSMIQEDKRVKTEECLNAIIRTGVLCSMESPFE 810 (833)
Q Consensus 771 ~~~~~~~----------------------------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 810 (833)
....... ..............+...+.+++.+||..||++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~ 298 (328)
T cd08226 219 LLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEK 298 (328)
T ss_pred HHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCccc
Confidence 0000000 000000011123446778999999999999999
Q ss_pred CCCHHHHHHH
Q 040925 811 RMDMRDVVAK 820 (833)
Q Consensus 811 RPt~~eil~~ 820 (833)
|||++|+++.
T Consensus 299 Rpta~e~l~~ 308 (328)
T cd08226 299 RPSASSLLSH 308 (328)
T ss_pred CCCHHHHhhC
Confidence 9999999865
No 346
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=8.8e-33 Score=296.66 Aligned_cols=258 Identities=23% Similarity=0.336 Sum_probs=201.5
Q ss_pred CccCceeccCcceEEEEEEECCCce----EEEEEEeecc-CCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 533 FSSSNMIGQGSFGYVYKGTLGEDEM----IVAVKVINLK-YKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 533 y~~~~~lg~G~~g~Vy~~~~~~~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
.+..++||+|+||+||+|.+-..|+ +||+|++... ......++.+|+-+|.+++|||+++++|+|..+.
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~------ 771 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST------ 771 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch------
Confidence 3445899999999999999865544 6899988643 3345678999999999999999999999987653
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
..+|++|++.|+|.+|++.++. .+-....+.|..|||+||.|||.+ ++|||||-.+|||+..-..+||.|||
T Consensus 772 ~qlvtq~mP~G~LlDyvr~hr~-----~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfg 843 (1177)
T KOG1025|consen 772 LQLVTQLMPLGCLLDYVREHRD-----NIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFG 843 (1177)
T ss_pred HHHHHHhcccchHHHHHHHhhc-----cccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecc
Confidence 7799999999999999998765 688889999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD 767 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~ 767 (833)
+|+....+...-.. .+..-.+.|||=|.+....|+.++||||+|+..|++.++|...|.- .. ..++.|
T Consensus 844 la~ll~~d~~ey~~------~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~g---i~---~~eI~d 911 (1177)
T KOG1025|consen 844 LAKLLAPDEKEYSA------PGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDG---IP---AEEIPD 911 (1177)
T ss_pred hhhccCcccccccc------cccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCC---CC---HHHhhH
Confidence 99987664432211 1223467899999999999999999999655555555554332210 00 111111
Q ss_pred ccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhhh
Q 040925 768 PSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRET 827 (833)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~~ 827 (833)
.. ....+-..++-|+-.+..++.+||..|++.||+++++.+.+.++.++
T Consensus 912 ------ll-----e~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 912 ------LL-----EKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred ------HH-----hccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 00 01112234556788899999999999999999999999999988754
No 347
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.97 E-value=6.5e-32 Score=291.16 Aligned_cols=269 Identities=20% Similarity=0.245 Sum_probs=201.1
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccC--CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
+|++.+.||+|++|.||+|+...+++.||+|++.... ....+.+.+|+++++.++||||+++++++...........|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5889999999999999999998889999999987543 33456789999999999999999999987655333334689
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||++ ++|.+++.... .+++..++.++.|++.||+|||+. ||+||||||+||+++.++.++|+|||.+
T Consensus 81 lv~e~~~-~~l~~~l~~~~------~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~ 150 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ------PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLA 150 (330)
T ss_pred EEecchh-hhHHHHHhCCC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCce
Confidence 9999997 58999987654 689999999999999999999999 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCC-CCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccc--
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS-EASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIV-- 766 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~-- 766 (833)
......... ........+|+.|+|||++.+. .++.++|+|| +|+.+++++++..|+......
T Consensus 151 ~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~s----------lG~il~~l~~g~~pf~~~~~~~~ 215 (330)
T cd07834 151 RGVDPDEDE-----KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWS----------VGCIFAELLTRKPLFPGRDYIDQ 215 (330)
T ss_pred Eeecccccc-----cccccccccccCcCCceeeecccCCCcchhHHH----------HHHHHHHHHcCCCCcCCCCHHHH
Confidence 876543210 0112234589999999998887 7899999999 666677777766655311100
Q ss_pred -------------------cccchhhhcccc-chhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH--HHHh
Q 040925 767 -------------------DPSLLMEVMTNN-SMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK--LCHT 824 (833)
Q Consensus 767 -------------------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~--L~~i 824 (833)
............ ............+.+..+.+++.+||+++|++|||++++++. ++.+
T Consensus 216 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 295 (330)
T cd07834 216 LNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQL 295 (330)
T ss_pred HHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhh
Confidence 000000000000 000000001112245678999999999999999999999985 5544
Q ss_pred h
Q 040925 825 R 825 (833)
Q Consensus 825 ~ 825 (833)
.
T Consensus 296 ~ 296 (330)
T cd07834 296 H 296 (330)
T ss_pred c
Confidence 3
No 348
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.97 E-value=1.7e-31 Score=285.61 Aligned_cols=247 Identities=26% Similarity=0.342 Sum_probs=193.6
Q ss_pred CccCceeccCcceEEEEEEECCCceEEEEEEeeccCC---cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK---GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 533 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
|+..+.||+|+||.||+|++..++..||+|.+..... .....+.+|++++++++|||++++++++.... ..+
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~~~ 101 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREH-----TAW 101 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC-----eEE
Confidence 7778899999999999999988999999999864322 22356888999999999999999999976554 789
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||++ |++.+++..... .+++.++..++.|++.|+.|||+. +|+||||+|+||+++.++.+||+|||++
T Consensus 102 lv~e~~~-g~l~~~~~~~~~-----~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~ 172 (317)
T cd06635 102 LVMEYCL-GSASDLLEVHKK-----PLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSA 172 (317)
T ss_pred EEEeCCC-CCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCc
Confidence 9999997 588887764332 689999999999999999999999 9999999999999999999999999998
Q ss_pred cccCcccccccccCCCccccccccccccCccccC---CCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGM---GSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIV 766 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~ 766 (833)
...... ....|++.|+|||++. +..++.++|||| +|+++++++++..|+...+..
T Consensus 173 ~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~s----------lGvil~el~~g~~p~~~~~~~ 230 (317)
T cd06635 173 SIASPA------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWS----------LGITCIELAERKPPLFNMNAM 230 (317)
T ss_pred cccCCc------------ccccCCccccChhhhhcCCCCCCCccccHHH----------HHHHHHHHHhCCCCCCCccHH
Confidence 754321 1235889999999863 456889999999 788888898888876422111
Q ss_pred cccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 040925 767 DPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLC 822 (833)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 822 (833)
........... .......+++.+.+++.+||+.+|.+||++.++++...
T Consensus 231 --~~~~~~~~~~~-----~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 279 (317)
T cd06635 231 --SALYHIAQNES-----PTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMF 279 (317)
T ss_pred --HHHHHHHhccC-----CCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChh
Confidence 00001111000 11112345667899999999999999999999998643
No 349
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.97 E-value=5.2e-35 Score=319.15 Aligned_cols=420 Identities=26% Similarity=0.341 Sum_probs=287.6
Q ss_pred EEEcCCCcCcccCCccccCCCCCCEEEccCCcccccCCccCCCCCCCCEEEcCCCcccccCCccccCCCCCcEEECCCcc
Q 040925 3 TLAVNDNYLTGQLPDFVGNLSDLEVIRIMGNSLGGKIPTTLGLLRNLVSLNVAENKFSGMFPRSICNISSLELIQLALNR 82 (833)
Q Consensus 3 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~ 82 (833)
.+|+++..++ .+|..+-.-..++.|+++.|-+...+-+.....-+|+.|||++|+++ ..|..+..+.+|+.|+++.|.
T Consensus 2 ~vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~ 79 (1081)
T KOG0618|consen 2 HVDASDEQLE-LIPEQILNNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNY 79 (1081)
T ss_pred CcccccccCc-ccchhhccHHHHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhh
Confidence 3678888888 78887777777999999999885544444555666999999999998 789999999999999999999
Q ss_pred cccccCchhhcCCCCccEEEccCCcceeeCCccccCCCCCcEEEcccCccccccCcCccCCCcCceEecccc-cCCCCCC
Q 040925 83 FSGNLPFDIVVNLPNLKALAIGGNNFFGSIPYSLSNASNLELLDLSVNQFKGNVSIDFSSLKNLLWLNLEQN-NLGTGTA 161 (833)
Q Consensus 83 l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N-~l~~~~~ 161 (833)
|. .+|... ..+.+|++|.|.+|++. ..|..+..+.+|++|++|.|++.. .|..+..++.++++..++| .+..
T Consensus 80 i~-~vp~s~-~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~~-~Pl~i~~lt~~~~~~~s~N~~~~~--- 152 (1081)
T KOG0618|consen 80 IR-SVPSSC-SNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFGP-IPLVIEVLTAEEELAASNNEKIQR--- 152 (1081)
T ss_pred Hh-hCchhh-hhhhcchhheeccchhh-cCchhHHhhhcccccccchhccCC-CchhHHhhhHHHHHhhhcchhhhh---
Confidence 98 788444 68899999999999887 788899999999999999999884 4556778888888888888 2211
Q ss_pred CCcccccccCCCCCCCEEEccCCcCcccCChhHhhhcccccEEEccCccccccCChhhhcCC------------------
Q 040925 162 TDLDFVTFLTNCSSLKALSLADNQFGGELPHSIANLSSTVINFGIGRNQISGTIPPGIRNLV------------------ 223 (833)
Q Consensus 162 ~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~------------------ 223 (833)
++. ..++.++|..|.+.+.++..+..+.. .|+|++|.+... .+.++.
T Consensus 153 --------lg~-~~ik~~~l~~n~l~~~~~~~i~~l~~---~ldLr~N~~~~~---dls~~~~l~~l~c~rn~ls~l~~~ 217 (1081)
T KOG0618|consen 153 --------LGQ-TSIKKLDLRLNVLGGSFLIDIYNLTH---QLDLRYNEMEVL---DLSNLANLEVLHCERNQLSELEIS 217 (1081)
T ss_pred --------hcc-ccchhhhhhhhhcccchhcchhhhhe---eeecccchhhhh---hhhhccchhhhhhhhcccceEEec
Confidence 111 11555555555555555555544432 355555544411 111111
Q ss_pred ------------------------CCCeEeccCCcccccCCccccCCCCCCEEEcccccCcccCCccccCCCCCCeEEee
Q 040925 224 ------------------------NLIGFGAEENQLHGTIPDAIGELKNLQKLCLFRNFLQGRIPSGLGNLTKLANLELS 279 (833)
Q Consensus 224 ------------------------~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 279 (833)
+|++++++.|++++ .|++++.+.+|+.|+..+|.++ .+|..+...++|+.|.+.
T Consensus 218 g~~l~~L~a~~n~l~~~~~~p~p~nl~~~dis~n~l~~-lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~ 295 (1081)
T KOG0618|consen 218 GPSLTALYADHNPLTTLDVHPVPLNLQYLDISHNNLSN-LPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAA 295 (1081)
T ss_pred CcchheeeeccCcceeeccccccccceeeecchhhhhc-chHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhh
Confidence 33444444444442 2244444444444444444443 333334444444444444
Q ss_pred cccccCCCCCCCCCCCccceeecCCceecccCCccccccccc-ceeeecCCCccCCCCCcccccCCCcCEEeccCCcCCC
Q 040925 280 SNSLQGNIPSSLGNCQNLMSFTASQNKLTGALPHQLLSITTL-SLYLDLSNNLLNGSLPLQVGHLKNLVILDISSNQFSG 358 (833)
Q Consensus 280 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l-l~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~ 358 (833)
+|.+. -+|.....+++|++|+|..|+|. .+|..++..... ++.|+.+.|.+....-..=...+.|+.|++.+|.++.
T Consensus 296 ~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd 373 (1081)
T KOG0618|consen 296 YNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTD 373 (1081)
T ss_pred hhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccc
Confidence 44444 33444455555666666666655 555544443333 3445555555552221111235678899999999998
Q ss_pred CCCccccCCCCCcEEeecCCccccccCccccCCCCCCeEEccCcccCCCchhhhcCCCCCceEECccCcCccccCCCCcc
Q 040925 359 VIPGTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNVSSNNLSGQIPEFLKNLSVLEFLSLSYNHFEGEVPTKGVF 438 (833)
Q Consensus 359 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~ 438 (833)
..-..+.+..+|+.|+|++|+|..++...+.++..|++|+||+|+++ .+|..+.++..|++|...+|++.+.| ....+
T Consensus 374 ~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~~fP-e~~~l 451 (1081)
T KOG0618|consen 374 SCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLLSFP-ELAQL 451 (1081)
T ss_pred cchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCceeech-hhhhc
Confidence 77778999999999999999999777778899999999999999999 68899999999999999999999876 66778
Q ss_pred CCCccccccCCcCC
Q 040925 439 SNKTKISLQGNMKL 452 (833)
Q Consensus 439 ~~~~~l~l~~N~~~ 452 (833)
..++.++++-|.-.
T Consensus 452 ~qL~~lDlS~N~L~ 465 (1081)
T KOG0618|consen 452 PQLKVLDLSCNNLS 465 (1081)
T ss_pred CcceEEecccchhh
Confidence 88888999888543
No 350
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.97 E-value=7.2e-32 Score=279.71 Aligned_cols=251 Identities=24% Similarity=0.283 Sum_probs=200.5
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccC--CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
+|++.+.||+|++|.||+|++..+++.||+|.+.... ......+.+|++++++++||||+++++++... ...+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 75 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDG-----NKLC 75 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccC-----CEEE
Confidence 5888999999999999999999899999999987432 23345678899999999999999999886544 4899
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||+++++|.+++...... ...+++..++.++.|++.||+|||+. |++|+||+|+||+++.++.+||+|||++
T Consensus 76 ~v~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~ 150 (256)
T cd08530 76 IVMEYAPFGDLSKAISKRKKK--RKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGIS 150 (256)
T ss_pred EEehhcCCCCHHHHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccch
Confidence 999999999999998763321 12689999999999999999999999 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPS 769 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~ 769 (833)
........ ....|++.|+|||...+..++.++|+|| .|..++++.++..|+...+.. .
T Consensus 151 ~~~~~~~~----------~~~~~~~~~~~Pe~~~~~~~~~~~D~~s----------lG~~~~~l~~g~~p~~~~~~~--~ 208 (256)
T cd08530 151 KVLKKNMA----------KTQIGTPHYMAPEVWKGRPYSYKSDIWS----------LGCLLYEMATFAPPFEARSMQ--D 208 (256)
T ss_pred hhhccCCc----------ccccCCccccCHHHHCCCCCCchhhHHH----------HHHHHHHHHhCCCCCCCCCHH--H
Confidence 87654311 1134889999999999888999999999 788888998888886532211 1
Q ss_pred chhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 770 LLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
......... ....+..++..+.+++.+||..+|++|||+.|+++.
T Consensus 209 ~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 209 LRYKVQRGK------YPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred HHHHHhcCC------CCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 111111111 011223456778999999999999999999999763
No 351
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.97 E-value=1.8e-31 Score=277.30 Aligned_cols=254 Identities=24% Similarity=0.346 Sum_probs=203.5
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC--cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
+|++.+.||+|++|.||+|.+..+++.|++|+++.... ...+.+.+|++++++++||||+++++.+.... ....+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~~ 77 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEE---KNTLN 77 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCC---CCeEE
Confidence 47888999999999999999998999999999975532 34578899999999999999999999976541 24789
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||+++++|.+++.... .+++..++.++.|++.|++|||+. +++|+||+|+||+++.++.+||+|||.+
T Consensus 78 lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~ 148 (260)
T cd06606 78 IFLEYVSGGSLSSLLKKFG------KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCA 148 (260)
T ss_pred EEEEecCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccE
Confidence 9999999999999998654 689999999999999999999999 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPS 769 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~ 769 (833)
......... .......++..|+|||...+...+.++|||| +|+++++++++..|+...+.. ..
T Consensus 149 ~~~~~~~~~------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~s----------lG~il~~l~~g~~p~~~~~~~-~~ 211 (260)
T cd06606 149 KRLGDIETG------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWS----------LGCTVIEMATGKPPWSELGNP-MA 211 (260)
T ss_pred Eeccccccc------ccccCCCCCccccCHhhhcCCCCCchhhHHH----------HHHHHHHHHhCCCCCCCCCch-HH
Confidence 876553211 0112245889999999998888999999999 788899999988887643300 00
Q ss_pred chhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 770 LLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
....... .......+...+..+.+++.+|+..||++||++.|++.
T Consensus 212 ~~~~~~~-----~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 212 ALYKIGS-----SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred HHHhccc-----cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 0000000 00011122334678999999999999999999999986
No 352
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.97 E-value=1.6e-31 Score=286.03 Aligned_cols=260 Identities=20% Similarity=0.183 Sum_probs=185.6
Q ss_pred CceeccCcceEEEEEEECCCceEEEEEEeecc--CCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEEE
Q 040925 536 SNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK--YKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFE 613 (833)
Q Consensus 536 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 613 (833)
.+.+|.| |.||.++...+++.||||+++.. .....+.+.+|++++++++||||+++++++...+ ..+++||
T Consensus 7 ~~~~~~~--~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~-----~~~~~~e 79 (314)
T cd08216 7 GKCFEDL--MIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDS-----ELYVVSP 79 (314)
T ss_pred hHhhcCC--ceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCC-----eEEEEEe
Confidence 3444444 45555555558999999999754 2334568999999999999999999999865544 7899999
Q ss_pred ecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccC
Q 040925 614 YMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLS 693 (833)
Q Consensus 614 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 693 (833)
|+++|+|.+++...... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+....
T Consensus 80 ~~~~~~l~~~l~~~~~~----~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~ 152 (314)
T cd08216 80 LMAYGSCEDLLKTHFPE----GLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMI 152 (314)
T ss_pred ccCCCCHHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeec
Confidence 99999999999865322 588999999999999999999999 99999999999999999999999999887554
Q ss_pred cccccccccCCCccccccccccccCccccCC--CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccc-
Q 040925 694 DHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG--SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSL- 770 (833)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~- 770 (833)
....... ..........++..|+|||++.+ ..++.++|||| +|+++++++++..|+..........
T Consensus 153 ~~~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws----------~G~il~el~~g~~pf~~~~~~~~~~~ 221 (314)
T cd08216 153 KHGKRQR-VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYS----------VGITACELANGHVPFKDMPATQMLLE 221 (314)
T ss_pred ccccccc-ccccccccccccccccCHHHhcCCCCCCCcchhHHH----------HHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 3221100 01111223457889999998865 35889999999 6777777777777654211000000
Q ss_pred --------------hhhh---cc-------ccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 771 --------------LMEV---MT-------NNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 771 --------------~~~~---~~-------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.... .. ...............+...+.+++.+||..||++|||++|+++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 222 KVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred HHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 0000 00 00000001111223345678899999999999999999999876
No 353
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.97 E-value=1.6e-31 Score=280.16 Aligned_cols=243 Identities=21% Similarity=0.237 Sum_probs=185.2
Q ss_pred eeccCcceEEEEEEECCCceEEEEEEeeccCCc---chhHHHHHHHH---HhhcCCCccceEeeEeecCCCCCCceEeEE
Q 040925 538 MIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG---ASRSFVAECEA---LRNIRHRNLIKIITICSSTDFKGTDFKAFV 611 (833)
Q Consensus 538 ~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~---l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 611 (833)
.||+|+||.||+|.+..+++.||+|.+...... ....+..|..+ ++...||+|+++++++...+ ..++|
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~~v 75 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD-----KLSFI 75 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCC-----EEEEE
Confidence 489999999999999888999999998643211 12223444443 34457999999998865544 89999
Q ss_pred EEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccc
Q 040925 612 FEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKF 691 (833)
Q Consensus 612 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 691 (833)
|||+++|+|.+++.... .+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 76 ~e~~~g~~L~~~l~~~~------~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~ 146 (278)
T cd05606 76 LDLMNGGDLHYHLSQHG------VFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 146 (278)
T ss_pred EecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccc
Confidence 99999999999987543 689999999999999999999999 999999999999999999999999999875
Q ss_pred cCcccccccccCCCccccccccccccCccccCCC-CCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccc
Q 040925 692 LSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS-EASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSL 770 (833)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~ 770 (833)
..... .....|+..|+|||++.+. .++.++|||| .|+++++++++..|+......+...
T Consensus 147 ~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s----------~G~~l~~l~~g~~p~~~~~~~~~~~ 206 (278)
T cd05606 147 FSKKK----------PHASVGTHGYMAPEVLQKGVAYDSSADWFS----------LGCMLFKLLRGHSPFRQHKTKDKHE 206 (278)
T ss_pred cCccC----------CcCcCCCcCCcCcHHhcCCCCCCcccchHh----------HHHHHHHHHhCCCCCCCCCccchHH
Confidence 43221 1123589999999998754 6899999999 8888999999998875332111111
Q ss_pred hhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCC-----CHHHHHHH
Q 040925 771 LMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERM-----DMRDVVAK 820 (833)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~ 820 (833)
........ ....+..++..+.+++.+|+..+|++|| ++.++++.
T Consensus 207 ~~~~~~~~------~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 207 IDRMTLTM------AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred HHHHhhcc------CCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 11110000 0111222456788999999999999999 99999864
No 354
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=8e-34 Score=267.33 Aligned_cols=255 Identities=23% Similarity=0.275 Sum_probs=191.4
Q ss_pred CceeccCcceEEEEEEECCCceEEEEEEeeccCC-cchhHHHHHHHHHhhc-CCCccceEeeEeecCCCCCCceEeEEEE
Q 040925 536 SNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNI-RHRNLIKIITICSSTDFKGTDFKAFVFE 613 (833)
Q Consensus 536 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~e 613 (833)
...||.|+||+|++..++.+|+..|||+++.... .+.+++..|.+...+- +.||||++||.+...+ ..|+.||
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EG-----dcWiCME 143 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEG-----DCWICME 143 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCC-----ceeeeHH
Confidence 3579999999999999999999999999986544 4567788888875555 6999999999975544 7899999
Q ss_pred ecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccC
Q 040925 614 YMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLS 693 (833)
Q Consensus 614 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 693 (833)
.|+ .|+..+.+.-.. .....+++.-.-.|..-.++||.||.+.. .|||||+||+|||++..|.+||||||.+....
T Consensus 144 LMd-~SlDklYk~vy~-vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv 219 (361)
T KOG1006|consen 144 LMD-ISLDKLYKRVYS-VQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLV 219 (361)
T ss_pred HHh-hhHHHHHHHHHH-HHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHH
Confidence 996 477655442110 11226888888999999999999999875 99999999999999999999999999997664
Q ss_pred cccccccccCCCccccccccccccCccccCC--CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccch
Q 040925 694 DHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG--SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLL 771 (833)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~ 771 (833)
+.-.. +..+|..+|||||.+.. ..|+.+||+|| .|++++|.++|.+|+.-++-+-..+.
T Consensus 220 ~SiAk---------T~daGCrpYmAPERi~p~~~gyDiRSDvWS----------LGITL~EvAtG~fPyr~w~svfeql~ 280 (361)
T KOG1006|consen 220 DSIAK---------TVDAGCRPYMAPERIDPSDKGYDIRSDVWS----------LGITLYEVATGNFPYRKWDSVFEQLC 280 (361)
T ss_pred HHHHh---------hhccCCccccChhccCCccCCcchhhhhhh----------hcceEeeeecCCCCcchHHHHHHHHH
Confidence 43221 12368999999997653 34899999999 88888899999998764333222222
Q ss_pred hhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 772 MEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.-+. .......... ..-++...+..++..|+.+|-++||...++.+.
T Consensus 281 ~Vv~-gdpp~l~~~~-~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 281 QVVI-GDPPILLFDK-ECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred HHHc-CCCCeecCcc-cccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 2221 1111110111 111256678899999999999999999998764
No 355
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=4.1e-32 Score=306.19 Aligned_cols=265 Identities=19% Similarity=0.180 Sum_probs=180.7
Q ss_pred HhcCCccCceeccCcceEEEEEEECCCc-eEEEEEEee--------------c---cCCcchhHHHHHHHHHhhcCCCcc
Q 040925 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDE-MIVAVKVIN--------------L---KYKGASRSFVAECEALRNIRHRNL 590 (833)
Q Consensus 529 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~-~~vavK~~~--------------~---~~~~~~~~~~~E~~~l~~l~h~ni 590 (833)
..++|++.+.||+|+||+||+|..+... ..+++|.+. . ........+.+|++++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 4578999999999999999998764322 222222110 0 111223567899999999999999
Q ss_pred ceEeeEeecCCCCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCC
Q 040925 591 IKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKP 670 (833)
Q Consensus 591 v~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp 670 (833)
+++++++...+ ..|+|||++. +++.+++........ ......+++.|+.|++.||+|||+. +||||||||
T Consensus 226 v~l~~~~~~~~-----~~~lv~e~~~-~~l~~~l~~~~~~~~-~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP 295 (501)
T PHA03210 226 LKIEEILRSEA-----NTYMITQKYD-FDLYSFMYDEAFDWK-DRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKL 295 (501)
T ss_pred CcEeEEEEECC-----eeEEEEeccc-cCHHHHHhhcccccc-ccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCH
Confidence 99999976655 7899999995 588887764332111 1234667889999999999999999 999999999
Q ss_pred CCeeecCCCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccH
Q 040925 671 SNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSL 750 (833)
Q Consensus 671 ~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l 750 (833)
+|||++.++.+||+|||+++.+..... .......||+.|+|||++.+..++.++|||| +|+++
T Consensus 296 ~NILl~~~~~vkL~DFGla~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS----------lGvil 358 (501)
T PHA03210 296 ENIFLNCDGKIVLGDFGTAMPFEKERE-------AFDYGWVGTVATNSPEILAGDGYCEITDIWS----------CGLIL 358 (501)
T ss_pred HHEEECCCCCEEEEeCCCceecCcccc-------cccccccCCcCCCCchhhcCCCCCcHHHHHH----------HHHHH
Confidence 999999999999999999986644221 1122356999999999999999999999999 55566
Q ss_pred HHHHHHhCCCcccccccc----------------cc------hhhhccccchh----hhhhhhchHHHHHHHHHHhhccC
Q 040925 751 HEFAKTALPEKVMEIVDP----------------SL------LMEVMTNNSMI----QEDKRVKTEECLNAIIRTGVLCS 804 (833)
Q Consensus 751 ~~~~~~~~p~~~~~~~~~----------------~~------~~~~~~~~~~~----~~~~~~~~~~~~~~l~~li~~cl 804 (833)
++++++..++......++ .+ ..+.+...... ...........+..+.+++.+|+
T Consensus 359 ~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL 438 (501)
T PHA03210 359 LDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKML 438 (501)
T ss_pred HHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHh
Confidence 666655432210000000 00 00000000000 00000001112345678899999
Q ss_pred CCCCCCCCCHHHHHHH
Q 040925 805 MESPFERMDMRDVVAK 820 (833)
Q Consensus 805 ~~dP~~RPt~~eil~~ 820 (833)
+.||++|||+.|+++.
T Consensus 439 ~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 439 TFDWHLRPGAAELLAL 454 (501)
T ss_pred ccCcccCcCHHHHhhC
Confidence 9999999999999874
No 356
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.97 E-value=1.6e-31 Score=282.28 Aligned_cols=259 Identities=22% Similarity=0.302 Sum_probs=193.7
Q ss_pred CccCceeccCcceEEEEEEECCCceEEEEEEeeccC--CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeE
Q 040925 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAF 610 (833)
Q Consensus 533 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 610 (833)
|++.+.||+|++|.||+|++..+++.||+|+++... ......+.+|++++++++|||++++++++.... .+..++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~~l 77 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKG---KGSIYM 77 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCC---CCcEEE
Confidence 678899999999999999999889999999997653 333457889999999999999999999986551 247999
Q ss_pred EEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccc
Q 040925 611 VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690 (833)
Q Consensus 611 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 690 (833)
||||+++ +|.+++..... .+++..++.++.|+++||+|||+. +++|+||||+||++++++.+||+|||.+.
T Consensus 78 v~e~~~~-~l~~~~~~~~~-----~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~ 148 (287)
T cd07840 78 VFEYMDH-DLTGLLDSPEV-----KFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLAR 148 (287)
T ss_pred Eeccccc-cHHHHHhccCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEcccccee
Confidence 9999974 99998876531 689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc--
Q 040925 691 FLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD-- 767 (833)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~-- 767 (833)
....... .......++..|+|||.+.+ ..++.++|||| +|+++++++++..|+......+
T Consensus 149 ~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~s----------lG~~l~el~t~~~p~~~~~~~~~~ 211 (287)
T cd07840 149 PYTKRNS-------ADYTNRVITLWYRPPELLLGATRYGPEVDMWS----------VGCILAELFLGKPIFQGSTELEQL 211 (287)
T ss_pred eccCCCc-------ccccccccccccCCceeeEccccCChHHHHHH----------HHHHHHHHHhCCCCCCCCChHHHH
Confidence 6644321 01112357889999997665 45789999999 6777777777766654211100
Q ss_pred -----------ccchhhh--------ccccchhhhhhhhchHH-HHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 768 -----------PSLLMEV--------MTNNSMIQEDKRVKTEE-CLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 768 -----------~~~~~~~--------~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
+...... ...........+....+ ++..+.+++.+||..+|++|||++++++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 212 EKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred HHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 0000000 00000000000011111 26778999999999999999999999763
No 357
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.97 E-value=1.4e-31 Score=283.67 Aligned_cols=259 Identities=23% Similarity=0.305 Sum_probs=192.2
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC--cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceE
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
++|++.+.||+|++|.||+|++..+++.||+|.++.... ...+.+.+|++++++++||||+++++++.... ..
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~ 76 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK-----RL 76 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCC-----eE
Confidence 579999999999999999999998999999999864422 23456889999999999999999999976544 89
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecC-CCcEEEcccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDH-DMVAHVCDFG 687 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kL~DfG 687 (833)
++||||++ +++.+++...... .+++..+..++.|++.||+|||+. +++||||+|+||+++. ++.+||+|||
T Consensus 77 ~lv~e~~~-~~l~~~~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg 148 (294)
T PLN00009 77 YLVFEYLD-LDLKKHMDSSPDF----AKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFG 148 (294)
T ss_pred EEEEeccc-ccHHHHHHhCCCC----CcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccc
Confidence 99999996 5888887654321 467888999999999999999999 9999999999999985 5579999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCCC-CCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS-EASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIV 766 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~ 766 (833)
++........ ......|++.|+|||++.+. .++.++|||| .|+++++++++..|+...+..
T Consensus 149 ~~~~~~~~~~--------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~s----------lG~i~~~l~tg~~pf~~~~~~ 210 (294)
T PLN00009 149 LARAFGIPVR--------TFTHEVVTLWYRAPEILLGSRHYSTPVDIWS----------VGCIFAEMVNQKPLFPGDSEI 210 (294)
T ss_pred cccccCCCcc--------ccccCceeecccCHHHHhCCCCCCcHHHHHH----------HHHHHHHHHhCCCCCCCCCHH
Confidence 9975533211 11123578999999987664 5789999999 778888888887776422111
Q ss_pred cccchh-hhccc-------------------cchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 767 DPSLLM-EVMTN-------------------NSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 767 ~~~~~~-~~~~~-------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
+..... ..... ...............+..+.+++.+|++.||++||++.++++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 211 DELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred HHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 00000 0000000001112345668899999999999999999999874
No 358
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.97 E-value=2e-31 Score=280.63 Aligned_cols=256 Identities=19% Similarity=0.231 Sum_probs=189.2
Q ss_pred CccCceeccCcceEEEEEEECCCceEEEEEEeeccCC-cchhHHHHHHHHHhhcC-CCccceEeeEeecCCCCCCceEeE
Q 040925 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIR-HRNLIKIITICSSTDFKGTDFKAF 610 (833)
Q Consensus 533 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~l 610 (833)
|++.+.||+|++|.||+|....+++.||+|+++.... .......+|+.+++++. ||||+++++++.+.. .+..++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~---~~~~~l 77 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRK---TGRLAL 77 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCC---CCcEEE
Confidence 6788999999999999999998999999999875422 22334567899999985 999999999986541 247899
Q ss_pred EEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccc
Q 040925 611 VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690 (833)
Q Consensus 611 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 690 (833)
||||++ |++.+.+..... .+++.+++.++.|++.||+|||+. +++||||||+||+++. +.+||+|||.++
T Consensus 78 v~e~~~-~~l~~~l~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~ 147 (282)
T cd07831 78 VFELMD-MNLYELIKGRKR-----PLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCR 147 (282)
T ss_pred EEecCC-ccHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEeccccc
Confidence 999997 588888865431 689999999999999999999999 9999999999999999 999999999998
Q ss_pred ccCcccccccccCCCccccccccccccCccccC-CCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc--
Q 040925 691 FLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGM-GSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD-- 767 (833)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~-- 767 (833)
....... .....+++.|+|||++. +..++.++|||| .|+++++++++..|+...+..+
T Consensus 148 ~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s----------lGv~l~el~~~~~p~~~~~~~~~~ 208 (282)
T cd07831 148 GIYSKPP---------YTEYISTRWYRAPECLLTDGYYGPKMDIWA----------VGCVFFEILSLFPLFPGTNELDQI 208 (282)
T ss_pred ccccCCC---------cCCCCCCcccCChhHhhcCCCCCcchhHHH----------HHHHHHHHHcCCcCCCCCCHHHHH
Confidence 6543211 11235889999999764 455788999999 6777777777766653221110
Q ss_pred -----------ccchhhhcccc---ch----hhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 768 -----------PSLLMEVMTNN---SM----IQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 768 -----------~~~~~~~~~~~---~~----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
+.+........ .. ...........++..+.+++.+||.+||++|||++++++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 209 AKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred HHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 00000000000 00 0000011123457889999999999999999999999863
No 359
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.97 E-value=2.1e-31 Score=283.45 Aligned_cols=266 Identities=21% Similarity=0.290 Sum_probs=195.8
Q ss_pred HHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC--cchhHHHHHHHHHhhcCCCccceEeeEeecCC----
Q 040925 528 KATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNIRHRNLIKIITICSSTD---- 601 (833)
Q Consensus 528 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 601 (833)
...++|++.+.||+|++|.||+|++..+++.||+|+++.... .....+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 456789999999999999999999998899999999975432 23356788999999999999999999876543
Q ss_pred -CCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCc
Q 040925 602 -FKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMV 680 (833)
Q Consensus 602 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 680 (833)
..+....++||||+++ ++.+.+..... .+++..++.++.|++.||+|||+. +|+||||||+||++++++.
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~ 154 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGLV-----HFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQ 154 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCc
Confidence 1223478999999975 77777765421 689999999999999999999999 9999999999999999999
Q ss_pred EEEcccccccccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCccccCCccHHHHHHHhCC
Q 040925 681 AHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALP 759 (833)
Q Consensus 681 ~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p 759 (833)
+||+|||.+........ .......+++.|+|||++.+ ..++.++|||| +|++++++.++..|
T Consensus 155 ~kl~dfg~~~~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~s----------lG~~~~el~~g~~~ 217 (302)
T cd07864 155 IKLADFGLARLYNSEES-------RPYTNKVITLWYRPPELLLGEERYGPAIDVWS----------CGCILGELFTKKPI 217 (302)
T ss_pred EEeCcccccccccCCcc-------cccccceeccCccChHHhcCCCCCCchhHHHH----------HHHHHHHHHhCCCC
Confidence 99999999986543221 01112346888999998764 35788999999 67777777777666
Q ss_pred Ccccccccc-------------cchhhhcccc--------chhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHH
Q 040925 760 EKVMEIVDP-------------SLLMEVMTNN--------SMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVV 818 (833)
Q Consensus 760 ~~~~~~~~~-------------~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil 818 (833)
+...+..+. ....+..... .......+......+..+.+++.+||..||++|||+++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il 297 (302)
T cd07864 218 FQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEAL 297 (302)
T ss_pred CCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 542211100 0000000000 0000000111123467889999999999999999999997
Q ss_pred H
Q 040925 819 A 819 (833)
Q Consensus 819 ~ 819 (833)
+
T Consensus 298 ~ 298 (302)
T cd07864 298 N 298 (302)
T ss_pred c
Confidence 5
No 360
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.97 E-value=8.8e-32 Score=290.87 Aligned_cols=264 Identities=20% Similarity=0.249 Sum_probs=193.8
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCC--------
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDF-------- 602 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-------- 602 (833)
++|++.+.||.|+||.||+|.+..+++.||+|.+........+.+.+|++++++++||||+++++++.....
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 689999999999999999999999999999999976655556778999999999999999999987654321
Q ss_pred -CCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecC-CCc
Q 040925 603 -KGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDH-DMV 680 (833)
Q Consensus 603 -~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~-~~~ 680 (833)
......++||||++ ++|.+++... .+++..++.++.|++.||.|||+. ||+||||||+||+++. ++.
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~~-------~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~ 153 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQG-------PLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLV 153 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCce
Confidence 11235799999997 5999888643 588999999999999999999999 9999999999999974 557
Q ss_pred EEEcccccccccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCccccCCccHHHHHHHhCC
Q 040925 681 AHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALP 759 (833)
Q Consensus 681 ~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p 759 (833)
+||+|||.++......... .......|+..|+|||++.+ ..++.++|||| +|++++++.++..|
T Consensus 154 ~kl~dfg~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwS----------lGvil~el~~g~~p 218 (342)
T cd07854 154 LKIGDFGLARIVDPHYSHK-----GYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWA----------AGCIFAEMLTGKPL 218 (342)
T ss_pred EEECCcccceecCCccccc-----cccccccccccccCHHHHhCccccCchhhHHH----------HHHHHHHHHhCCCC
Confidence 8999999997653321110 11112357899999997654 56888999999 77778888888777
Q ss_pred Cccccccc-------------ccchhhh-------cc-ccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHH
Q 040925 760 EKVMEIVD-------------PSLLMEV-------MT-NNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVV 818 (833)
Q Consensus 760 ~~~~~~~~-------------~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil 818 (833)
+......+ +...... .. ...................+.+++.+||..||++|||++|++
T Consensus 219 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell 298 (342)
T cd07854 219 FAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEAL 298 (342)
T ss_pred CCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHh
Confidence 64211000 0000000 00 000000000001122456788999999999999999999998
Q ss_pred HH
Q 040925 819 AK 820 (833)
Q Consensus 819 ~~ 820 (833)
+.
T Consensus 299 ~h 300 (342)
T cd07854 299 MH 300 (342)
T ss_pred CC
Confidence 64
No 361
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.97 E-value=1.1e-31 Score=278.84 Aligned_cols=244 Identities=20% Similarity=0.250 Sum_probs=186.4
Q ss_pred ceeccCcceEEEEEEECCCceEEEEEEeeccCC---cchhHHHHHHHHH-hhcCCCccceEeeEeecCCCCCCceEeEEE
Q 040925 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK---GASRSFVAECEAL-RNIRHRNLIKIITICSSTDFKGTDFKAFVF 612 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l-~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 612 (833)
+.||+|++|.||+|.+..+++.||+|+++.... .....+..|..++ ...+|||++++++++...+ ..++||
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~-----~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKD-----YLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCC-----eEEEEE
Confidence 579999999999999988899999999864321 1123345555544 4458999999999976544 899999
Q ss_pred EecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccccc
Q 040925 613 EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL 692 (833)
Q Consensus 613 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 692 (833)
||+++++|.+++.... .+++..+..++.|++.||.|||+. +++||||+|+||+++.++.+||+|||++...
T Consensus 77 e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 147 (260)
T cd05611 77 EYLNGGDCASLIKTLG------GLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNG 147 (260)
T ss_pred eccCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceec
Confidence 9999999999997654 688999999999999999999999 9999999999999999999999999998754
Q ss_pred CcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchh
Q 040925 693 SDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLM 772 (833)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~ 772 (833)
.. .....|++.|+|||...+..++.++|||| .|++++++.++..|+..... .....
T Consensus 148 ~~------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~s----------lG~il~~l~~g~~p~~~~~~--~~~~~ 203 (260)
T cd05611 148 LE------------NKKFVGTPDYLAPETILGVGDDKMSDWWS----------LGCVIFEFLFGYPPFHAETP--DAVFD 203 (260)
T ss_pred cc------------cccCCCCcCccChhhhcCCCCcchhhhHH----------HHHHHHHHHHCCCCCCCCCH--HHHHH
Confidence 32 11235889999999998888999999999 78889999999888753221 01111
Q ss_pred hhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 040925 773 EVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKL 821 (833)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 821 (833)
......... .......++..+.+++.+||+.||++|||+.++.+.+
T Consensus 204 ~~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 204 NILSRRINW---PEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred HHHhcccCC---CCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 111100000 0111123567889999999999999999776554433
No 362
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.97 E-value=2.2e-31 Score=287.76 Aligned_cols=263 Identities=19% Similarity=0.259 Sum_probs=194.3
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC--CcchhHHHHHHHHHhhcCCCccceEeeEeecCCC-CCCc
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVAECEALRNIRHRNLIKIITICSSTDF-KGTD 606 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 606 (833)
.++|.+.+.||+|++|.||+|++..+++.||+|+++... ......+.+|++++++++||||+++++++..... ....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 378999999999999999999998899999999986432 2223567899999999999999999998765431 2234
Q ss_pred eEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccc
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDF 686 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 686 (833)
..++||||+.. ++.++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 94 ~~~lv~e~~~~-~l~~~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~df 161 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMGH--------PLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDF 161 (342)
T ss_pred eEEEEeccccc-CHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeC
Confidence 57999999964 78776532 578999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccc
Q 040925 687 GLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEI 765 (833)
Q Consensus 687 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~ 765 (833)
|+++..... .....||+.|+|||++.+ ..++.++|||| +|+++++++++..|+...+.
T Consensus 162 g~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~s----------lGvil~el~~g~~pf~~~~~ 220 (342)
T cd07879 162 GLARHADAE-----------MTGYVVTRWYRAPEVILNWMHYNQTVDIWS----------VGCIMAEMLTGKTLFKGKDY 220 (342)
T ss_pred CCCcCCCCC-----------CCCceeeecccChhhhcCccccCchHHHHH----------HHHHHHHHHhCCCCCCCCCH
Confidence 998754321 112458899999998766 46889999999 77778888887777642211
Q ss_pred cc-------------ccchh--------hhccc-cchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH--H
Q 040925 766 VD-------------PSLLM--------EVMTN-NSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK--L 821 (833)
Q Consensus 766 ~~-------------~~~~~--------~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~--L 821 (833)
.+ +.+.. ..... ............+.....+.+++.+||+.||++||+++|++.. +
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f 300 (342)
T cd07879 221 LDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYF 300 (342)
T ss_pred HHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcch
Confidence 10 00000 00000 0000000000011234568899999999999999999999865 5
Q ss_pred HHhh
Q 040925 822 CHTR 825 (833)
Q Consensus 822 ~~i~ 825 (833)
+...
T Consensus 301 ~~~~ 304 (342)
T cd07879 301 DSFR 304 (342)
T ss_pred hhcc
Confidence 5543
No 363
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.97 E-value=8.9e-32 Score=280.58 Aligned_cols=252 Identities=22% Similarity=0.280 Sum_probs=192.0
Q ss_pred eccCcceEEEEEEECCCceEEEEEEeeccCC---cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEEEec
Q 040925 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYK---GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYM 615 (833)
Q Consensus 539 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 615 (833)
||+|++|.||+|++..+++.||+|++..... ...+.+.+|++++++++||||+++++.+... ...|+||||+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~~lv~e~~ 75 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGK-----KNLYLVMEYL 75 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecC-----cEEEEEEecC
Confidence 6899999999999998899999999864432 3456788999999999999999999886443 4899999999
Q ss_pred CCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccCcc
Q 040925 616 ENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDH 695 (833)
Q Consensus 616 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 695 (833)
++++|.+++.... .+++..+..++.|+++||+|||+. +++||||+|+||+++.++.+||+|||++......
T Consensus 76 ~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~ 146 (265)
T cd05579 76 PGGDLASLLENVG------SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVR 146 (265)
T ss_pred CCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccC
Confidence 9999999998654 689999999999999999999999 9999999999999999999999999998754332
Q ss_pred cccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchhhhc
Q 040925 696 QLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVM 775 (833)
Q Consensus 696 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~~~~ 775 (833)
................++..|+|||+..+..++.++|||| +|+.+++++++..|+..... ........
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~s----------lG~~~~~l~~g~~p~~~~~~--~~~~~~~~ 214 (265)
T cd05579 147 RQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWS----------LGCILYEFLVGIPPFHGETP--EEIFQNIL 214 (265)
T ss_pred cccccccccccccCcccCccccCHHHhcCCCCCcchhhHH----------HHHHHHHHHhCCCCCCCCCH--HHHHHHHh
Confidence 1110000011122346889999999998888999999999 78888999998888653221 11111111
Q ss_pred cccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 040925 776 TNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKL 821 (833)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 821 (833)
..... .......+..+.+++.+||+.+|++|||+.++.+.+
T Consensus 215 ~~~~~-----~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 215 NGKIE-----WPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred cCCcC-----CCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 10100 001111267789999999999999999995554443
No 364
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.97 E-value=2.8e-31 Score=286.80 Aligned_cols=265 Identities=21% Similarity=0.292 Sum_probs=195.7
Q ss_pred HhcCCccCceeccCcceEEEEEEECCCceEEEEEEeecc--CCcchhHHHHHHHHHhhc-CCCccceEeeEeecCCCCCC
Q 040925 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK--YKGASRSFVAECEALRNI-RHRNLIKIITICSSTDFKGT 605 (833)
Q Consensus 529 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 605 (833)
..++|++.+.||+|+||.||+|.+..+++.||+|++... .......+.+|+.+++++ +||||+++++++...+ .
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~---~ 81 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEN---D 81 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCC---C
Confidence 456899999999999999999999888999999988532 222345677899999999 9999999999875432 3
Q ss_pred ceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcc
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 685 (833)
...++||||++ ++|.+++... .+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+|
T Consensus 82 ~~~~lv~e~~~-~~L~~~~~~~-------~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d 150 (337)
T cd07852 82 KDIYLVFEYME-TDLHAVIRAN-------ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLAD 150 (337)
T ss_pred ceEEEEecccc-cCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEee
Confidence 46899999997 5999988753 478889999999999999999999 999999999999999999999999
Q ss_pred cccccccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccc
Q 040925 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVME 764 (833)
Q Consensus 686 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~ 764 (833)
||.+.......... .........||+.|+|||++.+ ..++.++|||| +|+++++++++..|+....
T Consensus 151 ~g~~~~~~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~s----------lG~~l~el~tg~~pf~~~~ 217 (337)
T cd07852 151 FGLARSLSELEENP---ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWS----------VGCILGEMLLGKPLFPGTS 217 (337)
T ss_pred ccchhccccccccc---cCcchhcccccccccCceeeeccccccccchHHH----------HHHHHHHHHhCCCCCCCCC
Confidence 99998664432110 0112223568999999998754 45788999999 7777888888877653211
Q ss_pred ccccc---------------------chhhhccccc-hhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 765 IVDPS---------------------LLMEVMTNNS-MIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 765 ~~~~~---------------------~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
..+.. .......... ............++.++.+++.+||+.||++|||+.++++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 218 TLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred hHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 11000 0000000000 00000000111245678999999999999999999999976
No 365
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.97 E-value=6.7e-31 Score=277.51 Aligned_cols=258 Identities=22% Similarity=0.308 Sum_probs=193.8
Q ss_pred CccCceeccCcceEEEEEEECCCceEEEEEEeeccCC--cchhHHHHHHHHHhhc---CCCccceEeeEeecCCCCCCce
Q 040925 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNI---RHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 533 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~~~~ 607 (833)
|++.+.||+|++|.||+|++..+++.||+|+++.... .....+.+|+.+++++ +||||+++++++...+..+...
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 6788999999999999999988899999999974422 2234567788887776 5999999999987765334445
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.+++|||++ ++|.+++...... .+++..++.++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~~----~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg 152 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPKP----GLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFG 152 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccCC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccC
Confidence 899999997 4899988764422 589999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD 767 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~ 767 (833)
.+........ .....++..|+|||++.+..++.++|||| +|++++++.++..|+......+
T Consensus 153 ~~~~~~~~~~---------~~~~~~~~~~~~PE~~~~~~~~~~~Di~s----------~G~~l~~l~~~~~~~~~~~~~~ 213 (287)
T cd07838 153 LARIYSFEMA---------LTSVVVTLWYRAPEVLLQSSYATPVDMWS----------VGCIFAELFRRRPLFRGTSEAD 213 (287)
T ss_pred cceeccCCcc---------cccccccccccChHHhccCCCCCcchhhh----------HHHHHHHHHhCCCcccCCChHH
Confidence 9976543211 11234789999999999888999999999 6777777777765543211100
Q ss_pred ccchhhhcc--------------------ccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 768 PSLLMEVMT--------------------NNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 768 ~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
....... ..............+....+.+++.+||..||++||+++|++.
T Consensus 214 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 214 --QLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred --HHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 0000000 0000000011112345677889999999999999999999975
No 366
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=9.7e-32 Score=267.01 Aligned_cols=266 Identities=20% Similarity=0.265 Sum_probs=197.2
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcC-C-C----ccceEeeEeecCCCC
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIR-H-R----NLIKIITICSSTDFK 603 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-~----niv~~~~~~~~~~~~ 603 (833)
.++|.++..+|+|.||.|-++.+.+++..||||+++.. ....+...-|+++++++. + | -+|.+.+| |+
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~w-----Fd 161 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMRDW-----FD 161 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehh-----hh
Confidence 67999999999999999999999999999999999743 234566788999999994 2 2 36777777 44
Q ss_pred CCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecC------
Q 040925 604 GTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDH------ 677 (833)
Q Consensus 604 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~------ 677 (833)
..++.|+|+|.+ |-|+++++..+... +++...++.+++|++++++|||+. +++|-||||+||++..
T Consensus 162 yrghiCivfell-G~S~~dFlk~N~y~----~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~ 233 (415)
T KOG0671|consen 162 YRGHICIVFELL-GLSTFDFLKENNYI----PFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKT 233 (415)
T ss_pred ccCceEEEEecc-ChhHHHHhccCCcc----ccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEE
Confidence 456999999998 55999999987643 799999999999999999999999 9999999999999832
Q ss_pred --------------CCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCcc
Q 040925 678 --------------DMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAV 743 (833)
Q Consensus 678 --------------~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~ 743 (833)
+..+|++|||.|++..... ..++.|..|+|||++.+-.++.++||||.||.+.++
T Consensus 234 ~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h-----------s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~El 302 (415)
T KOG0671|consen 234 YNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH-----------STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVEL 302 (415)
T ss_pred eccCCccceeccCCCcceEEEecCCcceeccCc-----------ceeeeccccCCchheeccCcCCccCceeeeeEEEEe
Confidence 2358999999998654322 246789999999999999999999999999999887
Q ss_pred ccCCcc-----------HHHHHHHhCCCcccccc-----------c---ccchh--hhccccchhhhhhhhchHHHHHHH
Q 040925 744 FNEGHS-----------LHEFAKTALPEKVMEIV-----------D---PSLLM--EVMTNNSMIQEDKRVKTEECLNAI 796 (833)
Q Consensus 744 ~~~g~~-----------l~~~~~~~~p~~~~~~~-----------~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l 796 (833)
|.+-.. +-|.+-|..|..+.... | ..... .................+.....+
T Consensus 303 ytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~L 382 (415)
T KOG0671|consen 303 YTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQL 382 (415)
T ss_pred eccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHH
Confidence 754221 22223333343321111 0 00000 000000000111112233445679
Q ss_pred HHHhhccCCCCCCCCCCHHHHHHH
Q 040925 797 IRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 797 ~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.+++.+|+..||.+|+|+.|++..
T Consensus 383 fDLl~~mL~fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 383 FDLLRRMLEFDPARRITLREALSH 406 (415)
T ss_pred HHHHHHHHccCccccccHHHHhcC
Confidence 999999999999999999999864
No 367
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.97 E-value=2e-31 Score=285.97 Aligned_cols=260 Identities=22% Similarity=0.272 Sum_probs=195.4
Q ss_pred HHHHHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC--CcchhHHHHHHHHHhhcCCCccceEeeEeecCCC
Q 040925 525 ELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVAECEALRNIRHRNLIKIITICSSTDF 602 (833)
Q Consensus 525 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 602 (833)
++...+++|++.+.||.|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++....
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~- 82 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPL- 82 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCC-
Confidence 34456789999999999999999999999999999999885432 223467889999999999999999999875432
Q ss_pred CCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEE
Q 040925 603 KGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAH 682 (833)
Q Consensus 603 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 682 (833)
...++||||+ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||+|+||++++++.+|
T Consensus 83 ---~~~~lv~e~~-~~~L~~~~~~~-------~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~ 148 (328)
T cd07856 83 ---EDIYFVTELL-GTDLHRLLTSR-------PLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLK 148 (328)
T ss_pred ---CcEEEEeehh-ccCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEE
Confidence 3688999999 56999888643 578888899999999999999999 999999999999999999999
Q ss_pred EcccccccccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCc
Q 040925 683 VCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEK 761 (833)
Q Consensus 683 L~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~ 761 (833)
|+|||.+...... .....+++.|+|||++.+ ..++.++|||| +|+++++++++..|+.
T Consensus 149 l~dfg~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~s----------lG~il~el~tg~~~f~ 207 (328)
T cd07856 149 ICDFGLARIQDPQ-----------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWS----------AGCIFAEMLEGKPLFP 207 (328)
T ss_pred eCccccccccCCC-----------cCCCcccccccCceeeeccCCcCcHHHHHH----------HHHHHHHHHhCCCCCC
Confidence 9999998754321 112357889999998765 56899999999 7777888888776654
Q ss_pred ccccccc-------------cchhh--------hccccc-hhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 762 VMEIVDP-------------SLLME--------VMTNNS-MIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 762 ~~~~~~~-------------~~~~~--------~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
..+.... ++... ...... ............++..+.+++.+||+.+|++|||+++++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~ 287 (328)
T cd07856 208 GKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALA 287 (328)
T ss_pred CCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 2211000 00000 000000 0000000011123567899999999999999999999976
Q ss_pred H
Q 040925 820 K 820 (833)
Q Consensus 820 ~ 820 (833)
.
T Consensus 288 ~ 288 (328)
T cd07856 288 H 288 (328)
T ss_pred C
Confidence 5
No 368
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.97 E-value=9.5e-32 Score=282.86 Aligned_cols=256 Identities=24% Similarity=0.327 Sum_probs=201.3
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcC-CCccceEeeEeecCCCCCCc
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIR-HRNLIKIITICSSTDFKGTD 606 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 606 (833)
++|.+.+.||+|++|.||+|+...+++.||+|++.... ....+.+.+|++++++++ ||||+++++++... +
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~-----~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDE-----E 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCC-----c
Confidence 36899999999999999999999899999999986431 223467889999999998 99999999986444 4
Q ss_pred eEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccc
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDF 686 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 686 (833)
..++||||+++++|.+++.... .+++..++.++.|++.||.|||+. +++|+||||+||+++.++.++++||
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df 146 (280)
T cd05581 76 NLYFVLEYAPNGELLQYIRKYG------SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDF 146 (280)
T ss_pred eEEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCC
Confidence 8999999999999999998754 689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCcccccccc------------cCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHH
Q 040925 687 GLAKFLSDHQLDTAV------------KTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFA 754 (833)
Q Consensus 687 G~a~~~~~~~~~~~~------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~ 754 (833)
|++............ ..........|+..|+|||+..+..++.++|||| .|..+++++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~s----------lG~~l~~l~ 216 (280)
T cd05581 147 GTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWA----------LGCIIYQML 216 (280)
T ss_pred ccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHH----------HHHHHHHHH
Confidence 999866543321100 0012223456899999999988888999999999 788888888
Q ss_pred HHhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCH----HHHHH
Q 040925 755 KTALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDM----RDVVA 819 (833)
Q Consensus 755 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~----~eil~ 819 (833)
++..|+...... ........ .....+...++.+.+++.+||..||++|||+ +++++
T Consensus 217 ~g~~p~~~~~~~--~~~~~~~~-------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 217 TGKPPFRGSNEY--LTFQKILK-------LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred hCCCCCCCccHH--HHHHHHHh-------cCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 888886533211 00001100 0111223346678899999999999999999 77764
No 369
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.97 E-value=2e-31 Score=282.58 Aligned_cols=254 Identities=20% Similarity=0.306 Sum_probs=192.5
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC-cchhHHHHHHHHHhhcC-CCccceEeeEeecCCCCCCce
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIR-HRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 607 (833)
.++|++.+.||+|++|.||+|++..+++.||||.++.... .....+..|+.++.+.. ||||+++++++.... .
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~-----~ 88 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDS-----D 88 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCC-----e
Confidence 4678999999999999999999998899999999975432 23455677887777775 999999999976554 7
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.++||||++ +++.+++..... .+++..+..++.|++.|++|||+.. +|+||||+|+||++++++.+||+|||
T Consensus 89 ~~~v~e~~~-~~l~~l~~~~~~-----~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg 160 (296)
T cd06618 89 VFICMELMS-TCLDKLLKRIQG-----PIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFG 160 (296)
T ss_pred EEEEeeccC-cCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccc
Confidence 999999985 478777765332 6899999999999999999999732 89999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCCCC----CCcccccccCCcCCCccccCCccHHHHHHHhCCCccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSE----ASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVM 763 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~ 763 (833)
++........ .....+++.|+|||++.+.. ++.++|||| +|+++++++++..|+...
T Consensus 161 ~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~s----------lG~il~el~~g~~p~~~~ 221 (296)
T cd06618 161 ISGRLVDSKA---------KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWS----------LGISLVELATGQFPYKNC 221 (296)
T ss_pred cchhccCCCc---------ccCCCCCccccCHhhcCCCCCccccccchhHHH----------HHHHHHHHHhCCCCCCcc
Confidence 9876543211 11234788999999987554 788999999 888889999988887532
Q ss_pred ccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 764 EIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
... ............. .......++.++.+++.+||..||++||+++++++.
T Consensus 222 ~~~-~~~~~~~~~~~~~----~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 222 KTE-FEVLTKILQEEPP----SLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred hhH-HHHHHHHhcCCCC----CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 110 0111111111000 000111245678999999999999999999999876
No 370
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.97 E-value=2.6e-31 Score=280.02 Aligned_cols=255 Identities=22% Similarity=0.306 Sum_probs=195.0
Q ss_pred CccCceeccCcceEEEEEEECCCceEEEEEEeeccCC--cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeE
Q 040925 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAF 610 (833)
Q Consensus 533 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 610 (833)
|++.+.||+|++|.||+|....+++.+|+|.++.... .....+.+|++++++++||||+++++++... ...++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~~ 75 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHK-----GDLYL 75 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccC-----CCEEE
Confidence 6778999999999999999988999999999875432 2346788999999999999999999986554 48999
Q ss_pred EEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccc
Q 040925 611 VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690 (833)
Q Consensus 611 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 690 (833)
||||+++ ++.+++..... .+++.+++.++.|++.||+|||+. +|+|+||||+||+++.++.+||+|||.+.
T Consensus 76 v~e~~~~-~l~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~ 146 (283)
T cd05118 76 VFEFMDT-DLYKLIKDRQR-----GLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLAR 146 (283)
T ss_pred EEeccCC-CHHHHHHhhcc-----cCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeE
Confidence 9999975 89888876431 689999999999999999999999 99999999999999999999999999997
Q ss_pred ccCcccccccccCCCccccccccccccCccccCCC-CCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccc-
Q 040925 691 FLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS-EASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDP- 768 (833)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~- 768 (833)
....... ......++..|+|||.+.+. .++.++|+|| .|+++++++++..++...+..+.
T Consensus 147 ~~~~~~~--------~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~s----------lG~~l~~l~tg~~~~~~~~~~~~~ 208 (283)
T cd05118 147 SFGSPVR--------PYTHYVVTRWYRAPELLLGDKGYSTPVDIWS----------VGCIFAELLSRRPLFPGKSEIDQL 208 (283)
T ss_pred ecCCCcc--------cccCccCcccccCcHHHhcCCCCCchhHHHH----------HHHHHHHHHhCCCCCCCCCHHHHH
Confidence 6654320 11123588899999988776 7899999999 67777777777766532211110
Q ss_pred ------------cchhhhcc--------ccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 769 ------------SLLMEVMT--------NNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 769 ------------~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
........ .............++++..+.+++.+||+.||.+||++++++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 209 FKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred HHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 00000000 0000000001122346778999999999999999999999986
No 371
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.97 E-value=3.1e-31 Score=285.61 Aligned_cols=264 Identities=20% Similarity=0.258 Sum_probs=192.0
Q ss_pred CCccCceeccCcceEEEEEEECCC--ceEEEEEEeeccCC--cchhHHHHHHHHHhhc-CCCccceEeeEeecCCCCCCc
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGED--EMIVAVKVINLKYK--GASRSFVAECEALRNI-RHRNLIKIITICSSTDFKGTD 606 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~--~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 606 (833)
+|++.+.||+|+||.||+|++..+ +..||+|+++.... ...+.+.+|+++++++ +||||+++++++.... ....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFP-GNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecc-ccCC
Confidence 488899999999999999999877 88999999864322 2245678899999999 5999999998754331 2234
Q ss_pred eEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccc
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDF 686 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 686 (833)
..+++|||+. ++|.+++.... .+++..++.++.|++.||+|||+. ||+||||||+||+++.++.+||+||
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Df 149 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRSGQ------PLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDF 149 (332)
T ss_pred cEEEEEeccc-CCHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcC
Confidence 6789999986 69999987544 689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccc
Q 040925 687 GLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEI 765 (833)
Q Consensus 687 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~ 765 (833)
|.++........ .........||+.|+|||+..+ ..++.++|||| .|+++++++++..|+...+.
T Consensus 150 g~a~~~~~~~~~----~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~s----------lGv~l~~l~~g~~pf~~~~~ 215 (332)
T cd07857 150 GLARGFSENPGE----NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWS----------VGCILAELLGRKPVFKGKDY 215 (332)
T ss_pred CCceeccccccc----ccccccCcccCccccCcHHHhCCCCCCcHHHHHH----------HHHHHHHHHhCCcCCCCCCH
Confidence 999866543211 1111223568999999998765 56899999999 67777777777666542110
Q ss_pred c-------------cccchhhhcccc-------c-hhh-hhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 766 V-------------DPSLLMEVMTNN-------S-MIQ-EDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 766 ~-------------~~~~~~~~~~~~-------~-~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
. +........... . ... .............+.+++.+|++.||++|||+.|+++.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 216 VDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred HHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0 000000000000 0 000 00000011124678899999999999999999999764
No 372
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.97 E-value=2.7e-31 Score=284.09 Aligned_cols=271 Identities=20% Similarity=0.256 Sum_probs=194.9
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCc--chhHHHHHHHHHhhcCCCccceEeeEeecCCC---CC
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG--ASRSFVAECEALRNIRHRNLIKIITICSSTDF---KG 604 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~ 604 (833)
.++|++.+.||+|++|.||+|++..+++.||+|++...... ....+.+|++++++++||||+++++++..... ..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 57899999999999999999999989999999998644322 23467889999999999999999988654331 12
Q ss_pred CceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEc
Q 040925 605 TDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVC 684 (833)
Q Consensus 605 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 684 (833)
....++||||+++ ++.+.+..... .+++.++..++.|+++||+|||+. +|+||||||+||++++++.+||+
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~~-----~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~ 157 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPSV-----KLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIA 157 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhcccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEC
Confidence 3467999999974 78777765321 689999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCccccccccc---CCCccccccccccccCccccCC-CCCCcccccccCCcCCCccccCCccHHHHHHHhCCC
Q 040925 685 DFGLAKFLSDHQLDTAVK---TPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPE 760 (833)
Q Consensus 685 DfG~a~~~~~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~ 760 (833)
|||+++............ .........|++.|+|||++.+ ..++.++|||| +|+++++++++..|+
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~s----------lG~il~el~~g~~~~ 227 (311)
T cd07866 158 DFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWG----------IGCVFAEMFTRRPIL 227 (311)
T ss_pred cCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHH----------HHHHHHHHHhCCCCC
Confidence 999998654432211100 1112234568899999998765 35789999999 777778887777665
Q ss_pred cccccccc--------------cc-----hhhhc--cccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 761 KVMEIVDP--------------SL-----LMEVM--TNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 761 ~~~~~~~~--------------~~-----~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
......+. .+ ..... .......+..........+.+.+++.+|+..||++|||+.|++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 228 QGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred CCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 31110000 00 00000 00000000000111223467889999999999999999999875
No 373
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-32 Score=305.67 Aligned_cols=261 Identities=21% Similarity=0.238 Sum_probs=206.6
Q ss_pred hHHHHHHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeecc---CCcchhHHHHHHHHHhhcCCCccceEeeEeec
Q 040925 523 YAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK---YKGASRSFVAECEALRNIRHRNLIKIITICSS 599 (833)
Q Consensus 523 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 599 (833)
..++.-..++|.+++.||+|+||.|..++++.+++.||+|++... ......-|..|-.+|..-+.+-|+.++..
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyA--- 143 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYA--- 143 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHH---
Confidence 456666778999999999999999999999999999999999753 23344678999999999999999999877
Q ss_pred CCCCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCC
Q 040925 600 TDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM 679 (833)
Q Consensus 600 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~ 679 (833)
|++..+.|+|||||+||+|-.++.... ++++..++.|+..|+-||.-+|+. |+|||||||+|||+|..|
T Consensus 144 --FQD~~~LYlVMdY~pGGDlltLlSk~~------~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~G 212 (1317)
T KOG0612|consen 144 --FQDERYLYLVMDYMPGGDLLTLLSKFD------RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSG 212 (1317)
T ss_pred --hcCccceEEEEecccCchHHHHHhhcC------CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccC
Confidence 455559999999999999999998875 699999999999999999999999 999999999999999999
Q ss_pred cEEEcccccccccCcccccccccCCCccccccccccccCccccC----C-CCCCcccccccCCcCCCccccCCccHHHHH
Q 040925 680 VAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGM----G-SEASMTGDIFTGRRPIDAVFNEGHSLHEFA 754 (833)
Q Consensus 680 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~ 754 (833)
.+||+|||.+..+..++... +...+|||-|++||+++ + +.|+..+|+|| .|+.+|||+
T Consensus 213 HikLADFGsClkm~~dG~V~-------s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWS----------lGV~~YEMl 275 (1317)
T KOG0612|consen 213 HIKLADFGSCLKMDADGTVR-------SSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWS----------LGVFMYEML 275 (1317)
T ss_pred cEeeccchhHHhcCCCCcEE-------eccccCCCCccCHHHHHhhcCCccccCCccchhh----------hHHHHHHHH
Confidence 99999999998877543322 22357999999999875 2 56899999999 888999999
Q ss_pred HHhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCC---HHHHHHH
Q 040925 755 KTALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMD---MRDVVAK 820 (833)
Q Consensus 755 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt---~~eil~~ 820 (833)
.|.-|+-....+...-..--.+....++ .. .+++....++|.+.+ -+|+.|-. ++++-.+
T Consensus 276 yG~TPFYadslveTY~KIm~hk~~l~FP--~~---~~VSeeakdLI~~ll-~~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 276 YGETPFYADSLVETYGKIMNHKESLSFP--DE---TDVSEEAKDLIEALL-CDREVRLGRNGIEDIKNH 338 (1317)
T ss_pred cCCCcchHHHHHHHHHHHhchhhhcCCC--cc---cccCHHHHHHHHHHh-cChhhhcccccHHHHHhC
Confidence 9999886544443322211111122111 11 224555666666655 57888887 8877654
No 374
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.97 E-value=3.6e-31 Score=285.76 Aligned_cols=265 Identities=19% Similarity=0.288 Sum_probs=191.8
Q ss_pred cCCcc-CceeccCcceEEEEEEECCCceEEEEEEeeccCCcc--------------hhHHHHHHHHHhhcCCCccceEee
Q 040925 531 GEFSS-SNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGA--------------SRSFVAECEALRNIRHRNLIKIIT 595 (833)
Q Consensus 531 ~~y~~-~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~~~~ 595 (833)
++|.. .+.||+|+||.||+|.+..+++.||||.++...... ...+.+|++++++++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 46654 477999999999999998899999999986432211 124778999999999999999999
Q ss_pred EeecCCCCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeee
Q 040925 596 ICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLL 675 (833)
Q Consensus 596 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll 675 (833)
++...+ ..++||||++ |+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++
T Consensus 88 ~~~~~~-----~~~lv~e~~~-~~l~~~l~~~~------~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill 152 (335)
T PTZ00024 88 VYVEGD-----FINLVMDIMA-SDLKKVVDRKI------RLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFI 152 (335)
T ss_pred EEecCC-----cEEEEEeccc-cCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEE
Confidence 976544 8999999997 69999987643 689999999999999999999999 99999999999999
Q ss_pred cCCCcEEEcccccccccCcccccccc------cCCCccccccccccccCccccCCC-CCCcccccccCCcCCCccccCCc
Q 040925 676 DHDMVAHVCDFGLAKFLSDHQLDTAV------KTPSSSIGLKGTVGYVAPEYGMGS-EASMTGDIFTGRRPIDAVFNEGH 748 (833)
Q Consensus 676 ~~~~~~kL~DfG~a~~~~~~~~~~~~------~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Di~s~~~~~~~~~~~g~ 748 (833)
+.++.+||+|||.+............ ..........+++.|+|||++.+. .++.++|||| .|+
T Consensus 153 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~s----------lG~ 222 (335)
T PTZ00024 153 NSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWS----------VGC 222 (335)
T ss_pred CCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHH----------HHH
Confidence 99999999999999766522111000 001111223578899999988764 4689999999 677
Q ss_pred cHHHHHHHhCCCcccccccccc-hhhhcc------------------ccchhhhhhhhchHHHHHHHHHHhhccCCCCCC
Q 040925 749 SLHEFAKTALPEKVMEIVDPSL-LMEVMT------------------NNSMIQEDKRVKTEECLNAIIRTGVLCSMESPF 809 (833)
Q Consensus 749 ~l~~~~~~~~p~~~~~~~~~~~-~~~~~~------------------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 809 (833)
++++++++..|+...+..+... ...... ................+..+.+++.+||..||+
T Consensus 223 ~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~ 302 (335)
T PTZ00024 223 IFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPL 302 (335)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCch
Confidence 7778877776654221110000 000000 000000000011122356788999999999999
Q ss_pred CCCCHHHHHHH
Q 040925 810 ERMDMRDVVAK 820 (833)
Q Consensus 810 ~RPt~~eil~~ 820 (833)
+|||++|++..
T Consensus 303 ~R~s~~~~l~~ 313 (335)
T PTZ00024 303 ERISAKEALKH 313 (335)
T ss_pred hccCHHHHhcC
Confidence 99999999863
No 375
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.97 E-value=4.5e-31 Score=281.17 Aligned_cols=247 Identities=24% Similarity=0.319 Sum_probs=192.0
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceE
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
.|+..+.||+|++|.||+|++..++..||+|.+.... ....+++.+|+++++.++|+|++++++++.... ..
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~ 90 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH-----TA 90 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCC-----ee
Confidence 4777889999999999999999889999999986432 223356788999999999999999999976554 78
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
++||||+. |++.+++..... .+++.++..++.|++.|+.|||+. +++||||||+||+++.++.+||+|||+
T Consensus 91 ~lv~e~~~-~~l~~~~~~~~~-----~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~ 161 (308)
T cd06634 91 WLVMEYCL-GSASDLLEVHKK-----PLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGS 161 (308)
T ss_pred EEEEEccC-CCHHHHHHHcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCccc
Confidence 99999996 688887754331 588999999999999999999999 999999999999999999999999999
Q ss_pred ccccCcccccccccCCCccccccccccccCccccC---CCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccc
Q 040925 689 AKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGM---GSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEI 765 (833)
Q Consensus 689 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~ 765 (833)
+...... ....|++.|+|||++. ...++.++|||| +|+++++++++..|+...+.
T Consensus 162 ~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~s----------lG~il~el~~g~~p~~~~~~ 219 (308)
T cd06634 162 ASIMAPA------------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWS----------LGITCIELAERKPPLFNMNA 219 (308)
T ss_pred ceeecCc------------ccccCCccccCHHHHhhcccCCCCcccchHH----------HHHHHHHHHcCCCCCccccH
Confidence 8754321 1235889999999864 356788999999 77788888888877542211
Q ss_pred ccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 040925 766 VDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKL 821 (833)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 821 (833)
... ......... .......++..+.+++.+||..+|++||+++++++.-
T Consensus 220 ~~~--~~~~~~~~~-----~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~ 268 (308)
T cd06634 220 MSA--LYHIAQNES-----PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 268 (308)
T ss_pred HHH--HHHHhhcCC-----CCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence 110 000000000 1111223566788999999999999999999998763
No 376
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.97 E-value=3.2e-31 Score=286.47 Aligned_cols=262 Identities=19% Similarity=0.244 Sum_probs=195.0
Q ss_pred HHHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC--cchhHHHHHHHHHhhcCCCccceEeeEeecCCC-C
Q 040925 527 SKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNIRHRNLIKIITICSSTDF-K 603 (833)
Q Consensus 527 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~ 603 (833)
....++|++.+.||+|++|.||+|.+..++..||||++..... ...+.+.+|++++++++||||+++++++..... .
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07880 11 WEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD 90 (343)
T ss_pred hccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc
Confidence 3356789999999999999999999998999999999864322 223568899999999999999999998754431 1
Q ss_pred CCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEE
Q 040925 604 GTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683 (833)
Q Consensus 604 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 683 (833)
.....++||||+ +++|.+++... .+++..++.++.|+++||+|||+. ||+||||||+||+++.++.+||
T Consensus 91 ~~~~~~lv~e~~-~~~l~~~~~~~-------~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl 159 (343)
T cd07880 91 RFHDFYLVMPFM-GTDLGKLMKHE-------KLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKI 159 (343)
T ss_pred ccceEEEEEecC-CCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEE
Confidence 223568999999 67999888643 589999999999999999999999 9999999999999999999999
Q ss_pred cccccccccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcc
Q 040925 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKV 762 (833)
Q Consensus 684 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~ 762 (833)
+|||++...... .....+++.|+|||++.+ ..++.++|+|| .|+++++++++..|+..
T Consensus 160 ~dfg~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s----------lG~ll~~l~~g~~pf~~ 218 (343)
T cd07880 160 LDFGLARQTDSE-----------MTGYVVTRWYRAPEVILNWMHYTQTVDIWS----------VGCIMAEMLTGKPLFKG 218 (343)
T ss_pred eecccccccccC-----------ccccccCCcccCHHHHhCCCCCCcHHHHHH----------HHHHHHHHHhCCCCCCC
Confidence 999999754321 112357899999998765 45888999999 77777888877776642
Q ss_pred cccccc-------------cchhh--------hccccchh-hhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 763 MEIVDP-------------SLLME--------VMTNNSMI-QEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 763 ~~~~~~-------------~~~~~--------~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
....+. .+... ........ ..........+...+.+++.+|++.||++|||+.++++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 219 HDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred CCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 211000 00000 00000000 000000112345568899999999999999999999854
No 377
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.97 E-value=8.9e-31 Score=279.46 Aligned_cols=245 Identities=26% Similarity=0.343 Sum_probs=190.6
Q ss_pred CccCceeccCcceEEEEEEECCCceEEEEEEeeccCC---cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK---GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 533 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
|...+.||+|++|.||+|++..+++.||+|.+..... ...+.+.+|++++++++|||++++++++.+.. ..+
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~ 97 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEH-----TAW 97 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCC-----EEE
Confidence 6667889999999999999988999999999864322 22356788999999999999999999976654 789
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||+. |++.+++..... .+++.+++.++.|++.|++|||+. |++||||||+||+++.++.+||+|||++
T Consensus 98 lv~e~~~-~~l~~~l~~~~~-----~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~ 168 (313)
T cd06633 98 LVMEYCL-GSASDLLEVHKK-----PLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSA 168 (313)
T ss_pred EEEecCC-CCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCC
Confidence 9999996 588887765432 589999999999999999999999 9999999999999999999999999998
Q ss_pred cccCcccccccccCCCccccccccccccCccccC---CCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGM---GSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIV 766 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~ 766 (833)
...... ....|+..|+|||++. ...++.++|||| +|++++++.++..|+...+..
T Consensus 169 ~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s----------lGvil~el~~g~~p~~~~~~~ 226 (313)
T cd06633 169 SKSSPA------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWS----------LGITCIELAERKPPLFNMNAM 226 (313)
T ss_pred cccCCC------------CCccccccccChhhccccCCCCCCchhhHHH----------HHHHHHHHHhCCCCCCCCChH
Confidence 643211 1245899999999874 456888999999 788888888888776432211
Q ss_pred cccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 767 DPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
... ........ .......++..+.+++.+||+.+|.+||++.+++..
T Consensus 227 ~~~--~~~~~~~~-----~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 227 SAL--YHIAQNDS-----PTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred HHH--HHHHhcCC-----CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 110 00000000 011122344568899999999999999999999864
No 378
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-31 Score=257.56 Aligned_cols=265 Identities=19% Similarity=0.239 Sum_probs=201.9
Q ss_pred hHHHHHHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcC-CCccceEeeEeecCC
Q 040925 523 YAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIR-HRNLIKIITICSSTD 601 (833)
Q Consensus 523 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 601 (833)
+.++-+-++ +.||+|+|+.|--++...++..||||++.+.......++.+|++++.+.+ |+||+++++++
T Consensus 75 F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefF---- 145 (463)
T KOG0607|consen 75 FEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFF---- 145 (463)
T ss_pred HHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHh----
Confidence 455555554 68999999999999999999999999998776667789999999999996 99999999995
Q ss_pred CCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCC--
Q 040925 602 FKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM-- 679 (833)
Q Consensus 602 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~-- 679 (833)
++...+|+|||-|.||+|..+|.++. .+++.++.++..+|+.||.|||.+ ||.|||+||+|||-.+-.
T Consensus 146 -Edd~~FYLVfEKm~GGplLshI~~~~------~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~v 215 (463)
T KOG0607|consen 146 -EDDTRFYLVFEKMRGGPLLSHIQKRK------HFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKV 215 (463)
T ss_pred -cccceEEEEEecccCchHHHHHHHhh------hccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCc
Confidence 44459999999999999999999876 799999999999999999999999 999999999999986543
Q ss_pred -cEEEcccccccccCcccccccccCCCccccccccccccCccccC---C--CCCCcccccccCCcCCCccccCCccHHHH
Q 040925 680 -VAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGM---G--SEASMTGDIFTGRRPIDAVFNEGHSLHEF 753 (833)
Q Consensus 680 -~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~--~~~~~~~Di~s~~~~~~~~~~~g~~l~~~ 753 (833)
-+|||||.++.-+.....-....+ ....+.+|+..|||||+.. + ..|+.+.|.|| .|+++|-|
T Consensus 216 sPvKiCDfDLgSg~k~~~~~spast-P~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwS----------LGvIlYIm 284 (463)
T KOG0607|consen 216 SPVKICDFDLGSGIKLNNDCSPAST-PELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWS----------LGVILYIM 284 (463)
T ss_pred CceeeeccccccccccCCCCCCCCC-ccccCcccchhhcchhHHhhhccccccccccccHHH----------HHHHHHHH
Confidence 589999988764432221111111 2223467999999999632 2 34777888888 89999999
Q ss_pred HHHhCCCcccccccccch------------hhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 754 AKTALPEKVMEIVDPSLL------------MEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 754 ~~~~~p~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
+.|..|+.-.-..|-.|- .+.++..... .+......++.+..+++...+.+||.+|-++.+++.
T Consensus 285 LsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYe--FPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 285 LSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYE--FPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred HhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCc--CChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 999988752111222211 1111111111 112233456777889999999999999999999876
No 379
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.97 E-value=5.6e-31 Score=277.42 Aligned_cols=256 Identities=22% Similarity=0.271 Sum_probs=189.4
Q ss_pred CccCceeccCcceEEEEEEECCCceEEEEEEeeccCCc-chhHHHHHHHHHhhcC-CCccceEeeEeecCCCCCCceEeE
Q 040925 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG-ASRSFVAECEALRNIR-HRNLIKIITICSSTDFKGTDFKAF 610 (833)
Q Consensus 533 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~l 610 (833)
|++.+.||+|++|.||+|+...+++.||+|++...... ......+|+..+++++ ||||+++++++... +..++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~-----~~~~l 75 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFREN-----DELYF 75 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcC-----CcEEE
Confidence 67889999999999999999888999999998644322 2234567999999999 99999999997554 48899
Q ss_pred EEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccc
Q 040925 611 VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690 (833)
Q Consensus 611 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 690 (833)
||||+ +|+|.+++...... .+++.++..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||.+.
T Consensus 76 v~e~~-~~~l~~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~ 147 (283)
T cd07830 76 VFEYM-EGNLYQLMKDRKGK----PFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAR 147 (283)
T ss_pred EEecC-CCCHHHHHHhcccc----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccce
Confidence 99999 78999988765421 689999999999999999999999 99999999999999999999999999997
Q ss_pred ccCcccccccccCCCccccccccccccCccccC-CCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccccc
Q 040925 691 FLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGM-GSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPS 769 (833)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~ 769 (833)
....... .....|+..|+|||++. ...++.++|+|| +|++++++.++..|+......+..
T Consensus 148 ~~~~~~~---------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s----------~G~~l~el~~g~~~~~~~~~~~~~ 208 (283)
T cd07830 148 EIRSRPP---------YTDYVSTRWYRAPEILLRSTSYSSPVDIWA----------LGCIMAELYTLRPLFPGSSEIDQL 208 (283)
T ss_pred eccCCCC---------cCCCCCcccccCceeeecCcCcCCccchhh----------HHHHHHHHHhCCCccCCCChHHHH
Confidence 6543211 11245889999999874 455789999999 677777777776554321111000
Q ss_pred c-------------h------hhhccccchhh--hhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 770 L-------------L------MEVMTNNSMIQ--EDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 770 ~-------------~------~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
. . ........... .......+.....+.+++.+||+.||++|||++|++..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 209 YKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred HHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 0 0 00000000000 00000011124678899999999999999999999753
No 380
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=6.3e-32 Score=270.90 Aligned_cols=264 Identities=22% Similarity=0.286 Sum_probs=197.2
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC-------CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCC
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY-------KGASRSFVAECEALRNIRHRNLIKIITICSSTDFK 603 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 603 (833)
++|-....||+|+|+.||+|.+-..++.||||+-.... ....+...+|.+|.+.+.||.||++|+|+.-+.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt-- 540 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT-- 540 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc--
Confidence 46888899999999999999999889999999864321 112345778999999999999999999985443
Q ss_pred CCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeec---CCCc
Q 040925 604 GTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLD---HDMV 680 (833)
Q Consensus 604 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~---~~~~ 680 (833)
+.+|-|+|||+|-+|.-|++.++ .+++.+++.|+.||+.||.||.+. .|+|||-||||.|||+- ..|.
T Consensus 541 --dsFCTVLEYceGNDLDFYLKQhk------lmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGe 611 (775)
T KOG1151|consen 541 --DSFCTVLEYCEGNDLDFYLKQHK------LMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGE 611 (775)
T ss_pred --ccceeeeeecCCCchhHHHHhhh------hhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccce
Confidence 57899999999999999999876 789999999999999999999987 78999999999999994 4578
Q ss_pred EEEcccccccccCcccccccccCCCccccccccccccCccccCC----CCCCcccccccCCcCCCccccCCccHHHHHHH
Q 040925 681 AHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG----SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKT 756 (833)
Q Consensus 681 ~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~ 756 (833)
+||.|||+++.+.++...... ....+....||.+|.+||.+.- .+.+.|+|||| .|+++|..+.|
T Consensus 612 IKITDFGLSKIMdddSy~~vd-GmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWS----------vGVIFyQClYG 680 (775)
T KOG1151|consen 612 IKITDFGLSKIMDDDSYNSVD-GMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWS----------VGVIFYQCLYG 680 (775)
T ss_pred eEeeecchhhhccCCccCccc-ceeeecccCceeeecCcceeecCCCCCccccceeeEe----------eehhhhhhhcc
Confidence 999999999998876543221 2233445689999999997643 35789999999 56666666677
Q ss_pred hCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 757 ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 757 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
.-|+.-...-..-+....+-+........ -+.+..+...+|++|+++.-++|....++..
T Consensus 681 rKPFGhnqsQQdILqeNTIlkAtEVqFP~---KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 681 RKPFGHNQSQQDILQENTILKATEVQFPP---KPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred CCCCCCchhHHHHHhhhchhcceeccCCC---CCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 77765211100000000011110001011 1123445678999999999999988877754
No 381
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.97 E-value=9.5e-31 Score=283.02 Aligned_cols=266 Identities=19% Similarity=0.274 Sum_probs=197.3
Q ss_pred hHHHHHHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC--cchhHHHHHHHHHhhcCCCccceEeeEeecC
Q 040925 523 YAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK--GASRSFVAECEALRNIRHRNLIKIITICSST 600 (833)
Q Consensus 523 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 600 (833)
..++....++|++.+.||+|+||.||+|.+..+++.||+|+++.... ...+.+.+|++++++++||||+++++++...
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~ 88 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA 88 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence 35566678999999999999999999999988999999999864322 2245678899999999999999999987543
Q ss_pred C-CCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCC
Q 040925 601 D-FKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM 679 (833)
Q Consensus 601 ~-~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~ 679 (833)
. +......+++++++ +++|.+++... .+++..++.++.|+++||+|||+. +|+||||||+||++++++
T Consensus 89 ~~~~~~~~~~lv~~~~-~~~L~~~~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~ 157 (345)
T cd07877 89 RSLEEFNDVYLVTHLM-GADLNNIVKCQ-------KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDC 157 (345)
T ss_pred ccccccccEEEEehhc-ccCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCC
Confidence 2 12234578888887 67999888643 588999999999999999999999 999999999999999999
Q ss_pred cEEEcccccccccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCccccCCccHHHHHHHhC
Q 040925 680 VAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTAL 758 (833)
Q Consensus 680 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~ 758 (833)
.+||+|||+++..... .....||+.|+|||++.+ ..++.++|||| +|++++++.++..
T Consensus 158 ~~kl~dfg~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~Dvws----------lG~il~el~~g~~ 216 (345)
T cd07877 158 ELKILDFGLARHTDDE-----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWS----------VGCIMAELLTGRT 216 (345)
T ss_pred CEEEeccccccccccc-----------ccccccCCCccCHHHHhCccCCCchhhHHH----------HHHHHHHHHhCCC
Confidence 9999999998754321 112458899999998766 56888999999 7777888888777
Q ss_pred CCcccccccc-------------cchhhhcccc---ch--hhhhhhhc----hHHHHHHHHHHhhccCCCCCCCCCCHHH
Q 040925 759 PEKVMEIVDP-------------SLLMEVMTNN---SM--IQEDKRVK----TEECLNAIIRTGVLCSMESPFERMDMRD 816 (833)
Q Consensus 759 p~~~~~~~~~-------------~~~~~~~~~~---~~--~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~RPt~~e 816 (833)
|+...+.... .......... .. ........ ....+..+.+++.+|++.||++|||+.+
T Consensus 217 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e 296 (345)
T cd07877 217 LFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 296 (345)
T ss_pred CCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHH
Confidence 6532111000 0000000000 00 00000000 0012456789999999999999999999
Q ss_pred HHHH
Q 040925 817 VVAK 820 (833)
Q Consensus 817 il~~ 820 (833)
+++.
T Consensus 297 ~l~h 300 (345)
T cd07877 297 ALAH 300 (345)
T ss_pred HhcC
Confidence 9875
No 382
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.97 E-value=4.9e-31 Score=278.46 Aligned_cols=255 Identities=19% Similarity=0.234 Sum_probs=195.3
Q ss_pred CCccCceeccCcceEEEEEEEC---CCceEEEEEEeeccC----CcchhHHHHHHHHHhhc-CCCccceEeeEeecCCCC
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLG---EDEMIVAVKVINLKY----KGASRSFVAECEALRNI-RHRNLIKIITICSSTDFK 603 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 603 (833)
+|++.+.||+|++|.||+|+.. .+++.||||+++... ....+.+.+|++++.++ +||+|+++++.+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~--- 77 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTD--- 77 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecC---
Confidence 4788899999999999999864 357889999986432 12345688999999999 599999999886544
Q ss_pred CCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEE
Q 040925 604 GTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683 (833)
Q Consensus 604 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 683 (833)
...++||||+++|+|.+++.... .+++..+..++.|+++||.|||+. +++||||||+||+++.++.++|
T Consensus 78 --~~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l 146 (288)
T cd05583 78 --TKLHLILDYVNGGELFTHLYQRE------HFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVL 146 (288)
T ss_pred --CEEEEEEecCCCCcHHHHHhhcC------CcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEE
Confidence 37899999999999999987543 688999999999999999999999 9999999999999999999999
Q ss_pred cccccccccCcccccccccCCCccccccccccccCccccCCCC--CCcccccccCCcCCCccccCCccHHHHHHHhCCCc
Q 040925 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSE--ASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEK 761 (833)
Q Consensus 684 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~ 761 (833)
+|||+++........ ......|++.|+|||...+.. .+.++|||| +|+++++++++..|+.
T Consensus 147 ~dfg~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~s----------lG~il~el~tg~~p~~ 209 (288)
T cd05583 147 TDFGLSKEFLAEEEE-------RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWS----------LGVLTFELLTGASPFT 209 (288)
T ss_pred EECcccccccccccc-------ccccccCCccccCHHHhcCCCCCCcchhhhHH----------HHHHHHHHHhCCCCcc
Confidence 999998765432111 112245899999999987655 788999999 7888899999888865
Q ss_pred ccccc--cccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 040925 762 VMEIV--DPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHT 824 (833)
Q Consensus 762 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i 824 (833)
..... ........... ....+..++..+.+++.+||+.||++|||+.++.+.+...
T Consensus 210 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 210 VDGEQNSQSEISRRILKS-------KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred cCcccchHHHHHHHHHcc-------CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 22110 01111111111 0111223456788999999999999999988887665543
No 383
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=8.6e-31 Score=276.93 Aligned_cols=251 Identities=20% Similarity=0.287 Sum_probs=192.6
Q ss_pred CCccCceeccCcceEEEEEEEC---CCceEEEEEEeeccC----CcchhHHHHHHHHHhhc-CCCccceEeeEeecCCCC
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLG---EDEMIVAVKVINLKY----KGASRSFVAECEALRNI-RHRNLIKIITICSSTDFK 603 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 603 (833)
+|++.+.||+|+||.||+|+.. .+|+.||+|+++... ....+.+.+|+++++++ +|++|+++++++...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~--- 77 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTD--- 77 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecC---
Confidence 4888999999999999999874 478899999997432 12345678899999999 599999999886544
Q ss_pred CCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEE
Q 040925 604 GTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683 (833)
Q Consensus 604 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 683 (833)
...++||||+++++|.+++.... .+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||
T Consensus 78 --~~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl 146 (290)
T cd05613 78 --TKLHLILDYINGGELFTHLSQRE------RFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVL 146 (290)
T ss_pred --CeEEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEE
Confidence 37899999999999999997654 688999999999999999999999 9999999999999999999999
Q ss_pred cccccccccCcccccccccCCCccccccccccccCccccCCC--CCCcccccccCCcCCCccccCCccHHHHHHHhCCCc
Q 040925 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS--EASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEK 761 (833)
Q Consensus 684 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~ 761 (833)
+|||++......... ......|+..|+|||++.+. .++.++|||| +|+++++++++..|+.
T Consensus 147 ~dfg~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~s----------lG~~l~~ll~g~~p~~ 209 (290)
T cd05613 147 TDFGLSKEFHEDEVE-------RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWS----------MGVLMYELLTGASPFT 209 (290)
T ss_pred eeCccceeccccccc-------ccccccCCcccCChhhccCCCCCCCccccHHH----------HHHHHHHHhcCCCCCC
Confidence 999999765432211 11134589999999987653 4678899999 7888889998888865
Q ss_pred cccccc--ccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCC-----CHHHHHHH
Q 040925 762 VMEIVD--PSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERM-----DMRDVVAK 820 (833)
Q Consensus 762 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~eil~~ 820 (833)
...... .......... ....+..+...+.+++.+||..||++|| +++++++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 210 VDGEKNSQAEISRRILKS-------EPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred cCCccccHHHHHHHhhcc-------CCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 221110 0110110000 0111233456788999999999999997 67777654
No 384
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.97 E-value=5.5e-31 Score=273.74 Aligned_cols=252 Identities=20% Similarity=0.228 Sum_probs=192.4
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccC-----CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCc
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY-----KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTD 606 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 606 (833)
+|.+.+.||+|+||.||+|++...+..+++|+++... ......+..|+.++++++||||+++++++... .
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~ 75 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLER-----D 75 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcC-----C
Confidence 5889999999999999999998777777777765321 12334577899999999999999999986544 3
Q ss_pred eEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccc
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDF 686 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 686 (833)
..++||||+++++|.+++...... ...+++.+++.++.|++.|+.|||+. +++|+||||+||+++. +.+||+||
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~ 149 (260)
T cd08222 76 AFCIITEYCEGRDLDCKLEELKHT--GKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDF 149 (260)
T ss_pred ceEEEEEeCCCCCHHHHHHHHhhc--ccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeeccc
Confidence 789999999999999988653211 12689999999999999999999999 9999999999999975 57999999
Q ss_pred ccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccc
Q 040925 687 GLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIV 766 (833)
Q Consensus 687 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~ 766 (833)
|.+........ ......|++.|+|||...+..++.++|+|| +|+++++++++..|+.....
T Consensus 150 g~~~~~~~~~~--------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~s----------lG~~~~~l~~~~~~~~~~~~- 210 (260)
T cd08222 150 GVSRLLMGSCD--------LATTFTGTPYYMSPEALKHQGYDSKSDIWS----------LGCILYEMCCLAHAFEGQNF- 210 (260)
T ss_pred CceeecCCCcc--------cccCCCCCcCccCHHHHccCCCCchhhHHH----------HHHHHHHHHhCCCCCCCccH-
Confidence 99876543211 111245889999999988888899999999 77888888888877642111
Q ss_pred cccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 767 DPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.......... .....+..++..+.+++.+||..||++||++.|+++.
T Consensus 211 -~~~~~~~~~~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 211 -LSVVLRIVEG------PTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred -HHHHHHHHcC------CCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 1111111100 0111234456788999999999999999999999863
No 385
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=9.2e-31 Score=304.28 Aligned_cols=147 Identities=31% Similarity=0.450 Sum_probs=131.6
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC---cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCc
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK---GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTD 606 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 606 (833)
.++|.+.+.||+|+||.||+|.+..+++.||||+++.... .....+..|+.+++.++||||+++++++....
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~----- 77 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSAN----- 77 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECC-----
Confidence 4689999999999999999999998999999999974322 22367889999999999999999998865544
Q ss_pred eEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccc
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDF 686 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 686 (833)
..|+||||+++++|.+++.... .+++..++.|+.||+.||+|||+. +||||||||+|||++.++.+||+||
T Consensus 78 ~~~lVmEy~~g~~L~~li~~~~------~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DF 148 (669)
T cd05610 78 NVYLVMEYLIGGDVKSLLHIYG------YFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDF 148 (669)
T ss_pred EEEEEEeCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeC
Confidence 8999999999999999997654 578899999999999999999999 9999999999999999999999999
Q ss_pred cccc
Q 040925 687 GLAK 690 (833)
Q Consensus 687 G~a~ 690 (833)
|+++
T Consensus 149 Gls~ 152 (669)
T cd05610 149 GLSK 152 (669)
T ss_pred CCCc
Confidence 9986
No 386
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.97 E-value=1.1e-30 Score=275.06 Aligned_cols=255 Identities=25% Similarity=0.322 Sum_probs=193.0
Q ss_pred CccCceeccCcceEEEEEEECCCceEEEEEEeeccC--CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeE
Q 040925 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAF 610 (833)
Q Consensus 533 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 610 (833)
|+..+.||+|++|.||+|+...+++.||+|.+.... ....+.+..|++++++++|+|++++++++... ...++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~~~~ 75 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTE-----RKLYL 75 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcC-----CceEE
Confidence 667789999999999999999889999999997543 33346788899999999999999999996554 48999
Q ss_pred EEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccc
Q 040925 611 VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690 (833)
Q Consensus 611 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 690 (833)
||||++ ++|.+++..... .+++..++.++.|++.||+|||+. +|+||||+|+||++++++.+||+|||.+.
T Consensus 76 v~e~~~-~~l~~~i~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~ 146 (282)
T cd07829 76 VFEYCD-MDLKKYLDKRPG-----PLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLAR 146 (282)
T ss_pred EecCcC-cCHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCccc
Confidence 999997 599999987531 689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCcccccccccCCCccccccccccccCccccCCC-CCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccc-
Q 040925 691 FLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS-EASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDP- 768 (833)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~- 768 (833)
....... ......++..|+|||++.+. .++.++|||| +|++++++.++..|+......+.
T Consensus 147 ~~~~~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~s----------lG~~l~~l~~~~~~~~~~~~~~~~ 208 (282)
T cd07829 147 AFGIPLR--------TYTHEVVTLWYRAPEILLGSKHYSTAVDIWS----------VGCIFAEMITGKPLFPGDSEIDQL 208 (282)
T ss_pred ccCCCcc--------ccCccccCcCcCChHHhcCCcCCCccccHHH----------HHHHHHHHHhCCCCCCCccHHHHH
Confidence 6543221 11123467889999988766 7899999999 77777777777666542211100
Q ss_pred ------------cchhhhc-----cccc--hhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 769 ------------SLLMEVM-----TNNS--MIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 769 ------------~~~~~~~-----~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
....... .... ..........+..+..+.+++.+||..||++||++++++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 209 FKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred HHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 0000000 0000 0000000111223567899999999999999999999975
No 387
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=1.1e-30 Score=282.47 Aligned_cols=260 Identities=20% Similarity=0.276 Sum_probs=194.5
Q ss_pred HhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC--CcchhHHHHHHHHHhhcCCCccceEeeEeecCCC-CCC
Q 040925 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVAECEALRNIRHRNLIKIITICSSTDF-KGT 605 (833)
Q Consensus 529 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~ 605 (833)
..++|++.+.||+|++|.||+|++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++...+. ...
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 4568999999999999999999999899999999986432 2233567789999999999999999987654431 222
Q ss_pred ceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcc
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 685 (833)
...++|+||+ +++|.+++... .+++..++.++.|+++||+|||+. ||+||||||+||+++.++.+||+|
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~~-------~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~d 161 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKCQ-------KLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILD 161 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcc
Confidence 3489999999 56999998753 589999999999999999999999 999999999999999999999999
Q ss_pred cccccccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccc
Q 040925 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVME 764 (833)
Q Consensus 686 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~ 764 (833)
||++...... .....++..|+|||.+.+ ..++.++|||| +|++++++.++..|+...+
T Consensus 162 fg~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~Dvws----------lGv~l~elltg~~pf~~~~ 220 (343)
T cd07851 162 FGLARHTDDE-----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWS----------VGCIMAELLTGKTLFPGSD 220 (343)
T ss_pred cccccccccc-----------ccCCcccccccCHHHHhCCCCCCchHhHHH----------HHHHHHHHHhCCCCCCCCC
Confidence 9999765332 112358899999998765 36789999999 7788888888877764221
Q ss_pred ccc-------------ccchhhhcccc---ch--hhhhhh----hchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 765 IVD-------------PSLLMEVMTNN---SM--IQEDKR----VKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 765 ~~~-------------~~~~~~~~~~~---~~--~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
..+ +.+........ .. .....+ .....+++.+.+++.+||..||++|||+.||++.
T Consensus 221 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 221 HIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred hHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 110 00000000000 00 000000 0011235678999999999999999999999764
No 388
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-30 Score=298.55 Aligned_cols=269 Identities=23% Similarity=0.368 Sum_probs=205.6
Q ss_pred HHHHhcCCccCceeccCcceEEEEEEECC-------CceEEEEEEeeccCC-cchhHHHHHHHHHhhc-CCCccceEeeE
Q 040925 526 LSKATGEFSSSNMIGQGSFGYVYKGTLGE-------DEMIVAVKVINLKYK-GASRSFVAECEALRNI-RHRNLIKIITI 596 (833)
Q Consensus 526 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~ 596 (833)
++...++..+.+.+|+|.||.|++|.... ....||||..+.... .+.+.+..|+++|+.+ +||||+.++|+
T Consensus 291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~ 370 (609)
T KOG0200|consen 291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGA 370 (609)
T ss_pred eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheee
Confidence 33444455667799999999999997531 256799999975533 3457899999999999 59999999999
Q ss_pred eecCCCCCCceEeEEEEecCCCChhhhhccCC-C-cccc--------ccCCHHHHHHHHHHHHHHHHHHhhcCCCCceee
Q 040925 597 CSSTDFKGTDFKAFVFEYMENGSLKDWLHQSD-D-QVEV--------CKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHG 666 (833)
Q Consensus 597 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-~-~~~~--------~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~ 666 (833)
|.... ..++|+||++.|+|.+++...+ . .... ..++..+.+.++.|||.|++||++. ++|||
T Consensus 371 ~t~~~-----~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHR 442 (609)
T KOG0200|consen 371 CTQDG-----PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHR 442 (609)
T ss_pred eccCC-----ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccch
Confidence 97643 7899999999999999998876 0 0000 1388999999999999999999999 99999
Q ss_pred CCCCCCeeecCCCcEEEcccccccccCcccccccccCCCccccccc--cccccCccccCCCCCCcccccccCCcCCCccc
Q 040925 667 DLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKG--TVGYVAPEYGMGSEASMTGDIFTGRRPIDAVF 744 (833)
Q Consensus 667 Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~ 744 (833)
|+..+|||+.++..+||+|||+|+........... +..| ...|||||.+....|+.++||||+|+..|+++
T Consensus 443 DLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~-------~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~Eif 515 (609)
T KOG0200|consen 443 DLAARNVLITKNKVIKIADFGLARDHYNKDYYRTK-------SSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIF 515 (609)
T ss_pred hhhhhhEEecCCCEEEEccccceeccCCCCceEec-------CCCCccceeecCHHHhccCcccccchhhHHHHHHHHHh
Confidence 99999999999999999999999965543322211 1123 23599999999999999999999888888888
Q ss_pred cCCccHHHHHHHhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHh
Q 040925 745 NEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHT 824 (833)
Q Consensus 745 ~~g~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i 824 (833)
+.|...|.- .+ ....+ .+.... ......+..|.+++.++|..||+.+|++||++.|+.+.++..
T Consensus 516 sLG~~PYp~----~~------~~~~l-~~~l~~-----G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 516 TLGGTPYPG----IP------PTEEL-LEFLKE-----GNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred hCCCCCCCC----CC------cHHHH-HHHHhc-----CCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 877665521 00 00111 111111 111234556788899999999999999999999999999985
Q ss_pred h
Q 040925 825 R 825 (833)
Q Consensus 825 ~ 825 (833)
.
T Consensus 580 l 580 (609)
T KOG0200|consen 580 L 580 (609)
T ss_pred H
Confidence 4
No 389
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=4.1e-30 Score=265.55 Aligned_cols=237 Identities=26% Similarity=0.291 Sum_probs=189.3
Q ss_pred eccCcceEEEEEEECCCceEEEEEEeeccCC---cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEEEec
Q 040925 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYK---GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYM 615 (833)
Q Consensus 539 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 615 (833)
||.|++|.||+|.+..+++.||+|.++.... ...+.+..|+.++++++||||+++++.+... ...++||||+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~~v~e~~ 75 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTE-----EKLYLVLEYA 75 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecC-----CeeEEEEecC
Confidence 6899999999999988899999999875432 2345788999999999999999999886544 4899999999
Q ss_pred CCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccCcc
Q 040925 616 ENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDH 695 (833)
Q Consensus 616 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 695 (833)
++++|.+++.... .+++..+..++.|++.|+.|+|+. +++|+||+|+||+++.++.++|+|||.+......
T Consensus 76 ~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~ 146 (250)
T cd05123 76 PGGELFSHLSKEG------RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSE 146 (250)
T ss_pred CCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccC
Confidence 9999999998654 589999999999999999999998 9999999999999999999999999998765432
Q ss_pred cccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchhhhc
Q 040925 696 QLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVM 775 (833)
Q Consensus 696 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~~~~ 775 (833)
. .......|+..|+|||...+...+.++|+|+ +|..++++.++..|+...+. ........
T Consensus 147 ~--------~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~s----------lG~~~~~l~~g~~p~~~~~~--~~~~~~~~ 206 (250)
T cd05123 147 G--------SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWS----------LGVLLYEMLTGKPPFYAEDR--KEIYEKIL 206 (250)
T ss_pred C--------CcccCCcCCccccChHHhCCCCCCchhhHHH----------HHHHHHHHHHCCCCCCCCCH--HHHHHHHh
Confidence 1 1112345889999999998888899999999 78888899888888753321 11111111
Q ss_pred cccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHH
Q 040925 776 TNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRD 816 (833)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~e 816 (833)
... ...+...+..+.+++.+||..||++|||+.+
T Consensus 207 ~~~-------~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 207 KDP-------LRFPEFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred cCC-------CCCCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 111 1112223567889999999999999999943
No 390
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-31 Score=265.52 Aligned_cols=242 Identities=22% Similarity=0.260 Sum_probs=194.4
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeecc---CCcchhHHHHHHHHHhhc-CCCccceEeeEeecCCCCCC
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK---YKGASRSFVAECEALRNI-RHRNLIKIITICSSTDFKGT 605 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 605 (833)
..+|..+.+||+|+||.|.+|..+++.+.||||+++.. ...+.+--..|-++|+-- +-|.+++++.++...+
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmD---- 423 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMD---- 423 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhh----
Confidence 34799999999999999999999999999999999754 223344456678888776 5788999988855544
Q ss_pred ceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcc
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 685 (833)
..|+||||+.||+|--+|++.+ ++.++.+..++..||-||-|||++ |||.||||.+|||+|.+|.+||+|
T Consensus 424 -RLyFVMEyvnGGDLMyhiQQ~G------kFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~D 493 (683)
T KOG0696|consen 424 -RLYFVMEYVNGGDLMYHIQQVG------KFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIAD 493 (683)
T ss_pred -heeeEEEEecCchhhhHHHHhc------ccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeee
Confidence 9999999999999999998766 688899999999999999999999 999999999999999999999999
Q ss_pred cccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccc
Q 040925 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEI 765 (833)
Q Consensus 686 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~ 765 (833)
||+++.---+ ...+..++|||.|+|||++..++|+.++|+|+ +|+.+||++.|..|+.-.+
T Consensus 494 FGmcKEni~~--------~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa----------~GVLLyEmlaGQpPFdGeD- 554 (683)
T KOG0696|consen 494 FGMCKENIFD--------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWA----------FGVLLYEMLAGQPPFDGED- 554 (683)
T ss_pred cccccccccC--------CcceeeecCCCcccccceEEecccccchhHHH----------HHHHHHHHHcCCCCCCCCC-
Confidence 9999743221 12234579999999999999999999999999 8999999999999976322
Q ss_pred ccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCC
Q 040925 766 VDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERM 812 (833)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 812 (833)
..++....+... -..+...+.+...++...+.+.|.+|.
T Consensus 555 -E~elF~aI~ehn-------vsyPKslSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 555 -EDELFQAIMEHN-------VSYPKSLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred -HHHHHHHHHHcc-------CcCcccccHHHHHHHHHHhhcCCcccc
Confidence 111111111111 112334566777888889999999995
No 391
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-32 Score=272.71 Aligned_cols=412 Identities=20% Similarity=0.204 Sum_probs=296.1
Q ss_pred EEcCCCcCcccCCccccCCCCCCEEEccCCcccccCCccCCCCCCCCEEEcCCCcccccCCccccCCCCCcEEECC-Ccc
Q 040925 4 LAVNDNYLTGQLPDFVGNLSDLEVIRIMGNSLGGKIPTTLGLLRNLVSLNVAENKFSGMFPRSICNISSLELIQLA-LNR 82 (833)
Q Consensus 4 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~-~N~ 82 (833)
.+.++-+|+ .+|..+.. .-+.|+|..|.|+.+.|++|+.+++|+.||||+|.|+.+-|++|.++.+|..|-+- +|+
T Consensus 51 VdCr~~GL~-eVP~~LP~--~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~Nk 127 (498)
T KOG4237|consen 51 VDCRGKGLT-EVPANLPP--ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNK 127 (498)
T ss_pred EEccCCCcc-cCcccCCC--cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCc
Confidence 456677787 67776665 67889999999999999999999999999999999999999999999998766554 599
Q ss_pred cccccCchhhcCCCCccEEEccCCcceeeCCccccCCCCCcEEEcccCccccccCcCccCCCcCceEecccccCCCCCCC
Q 040925 83 FSGNLPFDIVVNLPNLKALAIGGNNFFGSIPYSLSNASNLELLDLSVNQFKGNVSIDFSSLKNLLWLNLEQNNLGTGTAT 162 (833)
Q Consensus 83 l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 162 (833)
|+ .+|.++|.+|..|+.|.+.-|++..+....|..|++|..|.|..|.+..+...+|.++..++.+.+..|.+-..-.-
T Consensus 128 I~-~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL 206 (498)
T KOG4237|consen 128 IT-DLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNL 206 (498)
T ss_pred hh-hhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcccccccc
Confidence 98 99999999999999999999999988899999999999999999999999999999999999999999974221100
Q ss_pred ------CcccccccCCCCCCCEEEccCCcCcccCChhHhhhccc-ccEEEccCccccccCChhhhcCCCCCeEeccCCcc
Q 040925 163 ------DLDFVTFLTNCSSLKALSLADNQFGGELPHSIANLSST-VINFGIGRNQISGTIPPGIRNLVNLIGFGAEENQL 235 (833)
Q Consensus 163 ------~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~-l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l 235 (833)
.-..+..+++..-..-..|.++++..+-+..+...... ...+....+....-....|..+++|+.|+|++|+|
T Consensus 207 ~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i 286 (498)
T KOG4237|consen 207 PWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKI 286 (498)
T ss_pred chhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCcc
Confidence 00011223344444445555555554434333322111 11223333333333335799999999999999999
Q ss_pred cccCCccccCCCCCCEEEcccccCcccCCccccCCCCCCeEEeecccccCCCCCCCCCCCccceeecCCceeccc-----
Q 040925 236 HGTIPDAIGELKNLQKLCLFRNFLQGRIPSGLGNLTKLANLELSSNSLQGNIPSSLGNCQNLMSFTASQNKLTGA----- 310 (833)
Q Consensus 236 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~----- 310 (833)
+.+-+.+|.++.++++|.|..|+|..+....|.++..|++|+|.+|+|+.+.|.+|..+.+|.+|+|-.|.+--.
T Consensus 287 ~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~w 366 (498)
T KOG4237|consen 287 TRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAW 366 (498)
T ss_pred chhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHH
Confidence 999999999999999999999999988888899999999999999999999999999999999999988876410
Q ss_pred CCcc----------cccccccceeeecCCCccCCC---CCcccc---------cCCCc-CEEeccCCcCCCCCCccccCC
Q 040925 311 LPHQ----------LLSITTLSLYLDLSNNLLNGS---LPLQVG---------HLKNL-VILDISSNQFSGVIPGTLSTC 367 (833)
Q Consensus 311 ~p~~----------~~~~~~ll~~L~ls~N~l~~~---~~~~~~---------~l~~L-~~L~ls~N~l~~~~~~~~~~l 367 (833)
+-++ -+.-+..++.+.++.+.+... .|+..+ ..+-+ ++..-|++.++ .+|..+-
T Consensus 367 l~~Wlr~~~~~~~~~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk-~lp~~iP-- 443 (498)
T KOG4237|consen 367 LGEWLRKKSVVGNPRCQSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLK-LLPRGIP-- 443 (498)
T ss_pred HHHHHhhCCCCCCCCCCCCchhccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchh-hcCCCCC--
Confidence 0000 011111123333433332211 111110 01111 11223333333 2222111
Q ss_pred CCCcEEeecCCccccccCccccCCCCCCeEEccCcccCCCchhhhcCCCCCceEECccC
Q 040925 368 VCLEYLDISSNSFHGVIPLSLSFLKSIKELNVSSNNLSGQIPEFLKNLSVLEFLSLSYN 426 (833)
Q Consensus 368 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N 426 (833)
..-.+|++.+|.++. +|.. .+.+| .+|+++|+++...-..|.+++.|.+|-|++|
T Consensus 444 ~d~telyl~gn~~~~-vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 444 VDVTELYLDGNAITS-VPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred chhHHHhcccchhcc-cCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 134578888998884 4444 56677 8899999998777778888899988888876
No 392
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=4.2e-30 Score=262.60 Aligned_cols=220 Identities=19% Similarity=0.103 Sum_probs=172.6
Q ss_pred CcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEEEecCCCChh
Q 040925 542 GSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLK 621 (833)
Q Consensus 542 G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~ 621 (833)
|.+|.||+|++..+++.||+|+++... ...+|...+....||||+++++++...+ ..++||||+++|+|.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~lv~e~~~~~~L~ 73 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSED-----SVFLVLQHAEGGKLW 73 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCC-----eEEEEEecCCCCCHH
Confidence 899999999999999999999996432 2344555556667999999999865544 899999999999999
Q ss_pred hhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccCcccccccc
Q 040925 622 DWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV 701 (833)
Q Consensus 622 ~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~ 701 (833)
+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++|||.+.......
T Consensus 74 ~~l~~~~------~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~----- 139 (237)
T cd05576 74 SHISKFL------NIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC----- 139 (237)
T ss_pred HHHHHhc------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhcccccc-----
Confidence 9987653 589999999999999999999999 99999999999999999999999999886553321
Q ss_pred cCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchhhhccccchh
Q 040925 702 KTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTNNSMI 781 (833)
Q Consensus 702 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 781 (833)
....++..|+|||+..+..++.++|+|| .|+++++++++..+..... ....... .
T Consensus 140 ------~~~~~~~~y~aPE~~~~~~~~~~~Dvws----------lG~il~el~~g~~~~~~~~----~~~~~~~--~--- 194 (237)
T cd05576 140 ------DGEAVENMYCAPEVGGISEETEACDWWS----------LGAILFELLTGKTLVECHP----SGINTHT--T--- 194 (237)
T ss_pred ------ccCCcCccccCCcccCCCCCCchhhHHH----------HHHHHHHHHHCcchhhcCc----hhccccc--c---
Confidence 1234677899999988888999999999 7778888888765533110 0000000 0
Q ss_pred hhhhhhchHHHHHHHHHHhhccCCCCCCCCCCH
Q 040925 782 QEDKRVKTEECLNAIIRTGVLCSMESPFERMDM 814 (833)
Q Consensus 782 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 814 (833)
...+..+++.+.+++.+|++.||++|||+
T Consensus 195 ----~~~~~~~~~~~~~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 195 ----LNIPEWVSEEARSLLQQLLQFNPTERLGA 223 (237)
T ss_pred ----cCCcccCCHHHHHHHHHHccCCHHHhcCC
Confidence 00112245678899999999999999997
No 393
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.96 E-value=3.9e-31 Score=278.83 Aligned_cols=254 Identities=22% Similarity=0.288 Sum_probs=198.2
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
.++|+...++|+|.||.||+|+++.+++..|+|+++...........+|+-+++..+|||||.++|-+...+ ..|
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~d-----klw 88 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRD-----KLW 88 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhc-----CcE
Confidence 458999999999999999999999999999999999887777888899999999999999999999864443 789
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+.||||.+|+|++.-+..+ ++++.++...++..++|++|||+. |-+|||||-.||++++.|.+|++|||.+
T Consensus 89 icMEycgggslQdiy~~Tg------plselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvs 159 (829)
T KOG0576|consen 89 ICMEYCGGGSLQDIYHVTG------PLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVS 159 (829)
T ss_pred EEEEecCCCcccceeeecc------cchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCch
Confidence 9999999999999888766 799999999999999999999999 9999999999999999999999999998
Q ss_pred cccCcccccccccCCCccccccccccccCcccc---CCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYG---MGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIV 766 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~ 766 (833)
..+.. +-.+..++.||++|||||+. +.+.|...+|||+.+ ++..|+..-..|-......
T Consensus 160 aqita--------ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~g----------itAiel~eLqpplfdlhpm 221 (829)
T KOG0576|consen 160 AQITA--------TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALG----------ITAIELGELQPPLFDLHPM 221 (829)
T ss_pred hhhhh--------hhhhhhcccCCccccchhHHHHHhcccccccccccccc----------cchhhhhhcCCcccccchH
Confidence 76543 23344567899999999974 356699999999944 4444443333332110000
Q ss_pred cccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 767 DPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
..-+ .+.+.. .++..........+.+-+++..|+.++|++|||++.++.
T Consensus 222 r~l~---LmTkS~-~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 222 RALF---LMTKSG-FQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred HHHH---HhhccC-CCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 0000 111111 111111112223556778899999999999999998765
No 394
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.1e-30 Score=251.34 Aligned_cols=250 Identities=21% Similarity=0.269 Sum_probs=196.0
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeecc---CCcchhHHHHHHHHHhhc-CCCccceEeeEeecCCCCCC
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK---YKGASRSFVAECEALRNI-RHRNLIKIITICSSTDFKGT 605 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 605 (833)
.++|...+.||+|+|++|..++.+.+.+.||+|++++. ..++.+-...|-.+..+- +||.+|-++.++.. +
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqt-----e 323 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQT-----E 323 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcc-----c
Confidence 46899999999999999999999999999999999754 334455677788887776 69999999988544 4
Q ss_pred ceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcc
Q 040925 606 DFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCD 685 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 685 (833)
...++|.||++||+|--++++++ +++++.++.+...|+-||.|||++ |||.||+|.+|+++|.+|.+||.|
T Consensus 324 srlffvieyv~ggdlmfhmqrqr------klpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltd 394 (593)
T KOG0695|consen 324 SRLFFVIEYVNGGDLMFHMQRQR------KLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTD 394 (593)
T ss_pred ceEEEEEEEecCcceeeehhhhh------cCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecc
Confidence 48999999999999988887765 799999999999999999999999 999999999999999999999999
Q ss_pred cccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccc
Q 040925 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEI 765 (833)
Q Consensus 686 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~ 765 (833)
+|+++.--. ....+..++|||.|+|||++.+.+|...+|+|+ .|+.++|++.+..|+.+...
T Consensus 395 ygmcke~l~--------~gd~tstfcgtpnyiapeilrgeeygfsvdwwa----------lgvlmfemmagrspfdivgm 456 (593)
T KOG0695|consen 395 YGMCKEGLG--------PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWA----------LGVLMFEMMAGRSPFDIVGM 456 (593)
T ss_pred cchhhcCCC--------CCcccccccCCCcccchhhhcccccCceehHHH----------HHHHHHHHHcCCCCcceecC
Confidence 999974322 222344589999999999999999999999999 88899999999999885554
Q ss_pred ccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCC
Q 040925 766 VDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERM 812 (833)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 812 (833)
-.+....+-.--........+ .+...+-....++..-+++||.+|.
T Consensus 457 ~n~d~ntedylfqvilekqir-iprslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 457 DNPDMNTEDYLFQVILEKQIR-IPRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred CCcccchhHHHHHHHhhhccc-ccceeehhhHHHHHHhhcCCcHHhc
Confidence 333332111100000000000 1111233445677788999999985
No 395
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=2.6e-30 Score=234.81 Aligned_cols=208 Identities=23% Similarity=0.330 Sum_probs=167.9
Q ss_pred HHHHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC-CcchhHHHHHHHHHhhc-CCCccceEeeEeecCCCC
Q 040925 526 LSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY-KGASRSFVAECEALRNI-RHRNLIKIITICSSTDFK 603 (833)
Q Consensus 526 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 603 (833)
++...++......||+|+||.|-+.++..+|...|+|.++..- .+..++...|+.+..+. .+|.+|++||....
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~r---- 116 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFR---- 116 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhc----
Confidence 4444556666789999999999999999999999999997543 33456788899887766 69999999997543
Q ss_pred CCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEE
Q 040925 604 GTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHV 683 (833)
Q Consensus 604 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 683 (833)
....++.||.|+- ||..+..+--..+ ..+++..+-+|+..+.+||.|||++. .+||||+||+|||++.+|++|+
T Consensus 117 -egdvwIcME~M~t-Sldkfy~~v~~~g--~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKi 190 (282)
T KOG0984|consen 117 -EGDVWICMELMDT-SLDKFYRKVLKKG--GTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKI 190 (282)
T ss_pred -cccEEEeHHHhhh-hHHHHHHHHHhcC--CcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEE
Confidence 3489999999964 8876654322111 16899999999999999999999986 8999999999999999999999
Q ss_pred cccccccccCcccccccccCCCccccccccccccCccccC----CCCCCcccccccCCcCCCccccCCccHHHHHHHhCC
Q 040925 684 CDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGM----GSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALP 759 (833)
Q Consensus 684 ~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p 759 (833)
||||.+....+.-..+ -..|...|||||.+. ...|+.++|||| .|.++.|+++..+|
T Consensus 191 CDFGIsG~L~dSiAkt---------~daGCkpYmaPEri~~e~n~~gY~vksDvWS----------LGItmiElA~lr~P 251 (282)
T KOG0984|consen 191 CDFGISGYLVDSIAKT---------MDAGCKPYMAPERINPELNQKGYSVKSDVWS----------LGITMIEMAILRFP 251 (282)
T ss_pred cccccceeehhhhHHH---------HhcCCCccCChhhcCcccCcccceeehhhhh----------hhhhhhhhhhcccc
Confidence 9999998765532211 134888999999764 346999999999 88999999999999
Q ss_pred Ccc
Q 040925 760 EKV 762 (833)
Q Consensus 760 ~~~ 762 (833)
+..
T Consensus 252 Y~~ 254 (282)
T KOG0984|consen 252 YES 254 (282)
T ss_pred ccc
Confidence 763
No 396
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.96 E-value=5.1e-30 Score=272.07 Aligned_cols=241 Identities=21% Similarity=0.182 Sum_probs=193.7
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhc-CCCccceEeeEeecCCCCCCceE
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNI-RHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
++.|.....+|.|+|+.|-.+.+..+++..+||++... ..+..+|+.++... +||||+++.+.+.+. .+.
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~~~v~~~~-----~~~ 391 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKSHDVYEDG-----KEI 391 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccc----ccccccccchhhhhcCCCcceeecceecCC-----cee
Confidence 55788888999999999999999999999999999644 23445678777776 699999999996544 499
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeee-cCCCcEEEcccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLL-DHDMVAHVCDFG 687 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll-~~~~~~kL~DfG 687 (833)
|+|||++.||-+.+.+...+ .....+..|+.+|+.|+.|||++ ||||||+||+|||+ +..+.++|+|||
T Consensus 392 ~~v~e~l~g~ell~ri~~~~-------~~~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG 461 (612)
T KOG0603|consen 392 YLVMELLDGGELLRRIRSKP-------EFCSEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFG 461 (612)
T ss_pred eeeehhccccHHHHHHHhcc-------hhHHHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEec
Confidence 99999999988877776553 22377788999999999999999 99999999999999 689999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD 767 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~ 767 (833)
.++..... ....+-|..|.|||+....+|+.++|||| .|+.+|+|++|..|+.....-
T Consensus 462 ~a~~~~~~-----------~~tp~~t~~y~APEvl~~~~yt~acD~WS----------LGvlLy~ML~G~tp~~~~P~~- 519 (612)
T KOG0603|consen 462 FWSELERS-----------CDTPALTLQYVAPEVLAIQEYTEACDWWS----------LGVLLYEMLTGRTLFAAHPAG- 519 (612)
T ss_pred hhhhCchh-----------hcccchhhcccChhhhccCCCCcchhhHH----------HHHHHHHHHhCCCccccCCch-
Confidence 99876553 11235688999999999999999999999 899999999999987633211
Q ss_pred ccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 768 PSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
-.+. ..+.. ......+++..++++.+||+.||.+||+|.++...
T Consensus 520 ~ei~-~~i~~--------~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 520 IEIH-TRIQM--------PKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred HHHH-HhhcC--------CccccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 1111 11111 01114567788999999999999999999999754
No 397
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.6e-29 Score=256.31 Aligned_cols=136 Identities=25% Similarity=0.450 Sum_probs=120.2
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcC-----C---CccceEeeEeecCCC
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIR-----H---RNLIKIITICSSTDF 602 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~~~~~~~~~~~ 602 (833)
++|.+.++||.|.|++||+|.+..+.+.||+|+++.. ....+....|+++|++++ | ..||+++++|...+
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG- 155 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG- 155 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC-
Confidence 6899999999999999999999999999999999733 334567889999999993 2 47999999998876
Q ss_pred CCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeee
Q 040925 603 KGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLL 675 (833)
Q Consensus 603 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll 675 (833)
....++|||+|+. |-+|..+|.....+ .++...+++|++||+.||.|||..| ||||-||||+|||+
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~Yr----Glpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSNYR----GLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhCCC----CCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 4456899999999 56999999887655 7999999999999999999999998 99999999999998
No 398
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.96 E-value=3.9e-29 Score=283.01 Aligned_cols=267 Identities=18% Similarity=0.136 Sum_probs=165.5
Q ss_pred HhcCCccCceeccCcceEEEEEEECCC----ceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCC-CC
Q 040925 529 ATGEFSSSNMIGQGSFGYVYKGTLGED----EMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTD-FK 603 (833)
Q Consensus 529 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~ 603 (833)
..++|++.+.||+|+||.||+|++..+ +..||+|++.... ..+....| .+++..+.+++.+...+.... ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~--~~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG--AVEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc--hhHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 567899999999999999999999888 8999999875321 11111111 112222233332222211110 12
Q ss_pred CCceEeEEEEecCCCChhhhhccCCCcc--------------ccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCC
Q 040925 604 GTDFKAFVFEYMENGSLKDWLHQSDDQV--------------EVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLK 669 (833)
Q Consensus 604 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~--------------~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlk 669 (833)
.....++||||+++++|.+++....... .........+..++.|++.||+|||+. +|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCC
Confidence 3457899999999999999987543110 000112345678999999999999999 99999999
Q ss_pred CCCeeecC-CCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCC----------------------
Q 040925 670 PSNVLLDH-DMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSE---------------------- 726 (833)
Q Consensus 670 p~NIll~~-~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---------------------- 726 (833)
|+|||++. ++.+||+|||+|+....... .......||+.|||||.+....
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~-------~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~ 355 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGIN-------YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLN 355 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccc-------cCCcccccCCCccChHHhhccCCCCCCccccccccccchhcccc
Confidence 99999986 57999999999986543211 1122357899999999653322
Q ss_pred CCcccccccCCcCCCccccCCccHHHHHHHhCCCcccc-----cc---ccc--chhhhccccchhhhhhh--hchHHHHH
Q 040925 727 ASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVME-----IV---DPS--LLMEVMTNNSMIQEDKR--VKTEECLN 794 (833)
Q Consensus 727 ~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~-----~~---~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~ 794 (833)
++.++|||| .|+++++++.+..+..... .+ +.. .......... ...... ........
T Consensus 356 ~~~k~DVwS----------lGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~ 424 (566)
T PLN03225 356 LPDRFDIYS----------AGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRA-SPDLRRGFEVLDLDGG 424 (566)
T ss_pred CCCCcccHH----------HHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhcccc-chhhhhhhhhccccch
Confidence 233447666 7777778776555432100 00 000 0000000000 000000 00001123
Q ss_pred HHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 795 AIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 795 ~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
...+++.+|+..||++|||++|++++
T Consensus 425 ~~~dLi~~mL~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 425 AGWELLKSMMRFKGRQRISAKAALAH 450 (566)
T ss_pred HHHHHHHHHccCCcccCCCHHHHhCC
Confidence 45589999999999999999999875
No 399
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=1.4e-29 Score=274.37 Aligned_cols=250 Identities=26% Similarity=0.293 Sum_probs=183.1
Q ss_pred CccCceeccCcce-EEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhc-CCCccceEeeEeecCCCCCCceEeE
Q 040925 533 FSSSNMIGQGSFG-YVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNI-RHRNLIKIITICSSTDFKGTDFKAF 610 (833)
Q Consensus 533 y~~~~~lg~G~~g-~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~l 610 (833)
|...+.+|.|+.| .||+|.+ .++.||||++- .+..+.+.+|+..++.- .|||||++|+.-. +..+.|+
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll---~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~-----d~qF~YI 580 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY--EGREVAVKRLL---EEFFDFAQREIQLLQESDEHPNVIRYYCSEQ-----DRQFLYI 580 (903)
T ss_pred eccHHHcccCCCCcEEEEEee--CCceehHHHHh---hHhHHHHHHHHHHHHhccCCCceEEEEeecc-----CCceEEE
Confidence 3444788999997 5899999 58899999984 23445678999999998 4999999998743 3459999
Q ss_pred EEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecC---C--CcEEEcc
Q 040925 611 VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDH---D--MVAHVCD 685 (833)
Q Consensus 611 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~---~--~~~kL~D 685 (833)
+.|.|. .+|.+++...... .........+.+..|++.||++||+. +||||||||.||||+. + .+++|+|
T Consensus 581 alELC~-~sL~dlie~~~~d--~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSD 654 (903)
T KOG1027|consen 581 ALELCA-CSLQDLIESSGLD--VEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISD 654 (903)
T ss_pred EehHhh-hhHHHHHhccccc--hhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecc
Confidence 999997 5999999985211 11122245678899999999999998 9999999999999976 3 4799999
Q ss_pred cccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccc
Q 040925 686 FGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEI 765 (833)
Q Consensus 686 fG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~ 765 (833)
||+++........ .....+..||-+|+|||++....-+.++||||.||.|+.+.+.|...+.-...
T Consensus 655 fglsKkl~~~~sS-----~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~--------- 720 (903)
T KOG1027|consen 655 FGLSKKLAGGKSS-----FSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLE--------- 720 (903)
T ss_pred cccccccCCCcch-----hhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHH---------
Confidence 9999988664432 12234567999999999999988899999999999998877776543321111
Q ss_pred ccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 766 VDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
-+..+......... -. ...++ ...++|.+|+++||..||+|.+|+.+
T Consensus 721 R~~NIl~~~~~L~~-----L~-~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 721 RQANILTGNYTLVH-----LE-PLPDC--EAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred hhhhhhcCccceee-----ec-cCchH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 01111000000000 00 01112 56799999999999999999999753
No 400
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=7.8e-31 Score=267.69 Aligned_cols=250 Identities=20% Similarity=0.279 Sum_probs=202.1
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeecc---CCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK---YKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
.+++++..||-|+||.|-++........+|+|.+++. .....+.+..|-.||...+.|.||++|-.+. +..+
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfr-----d~ky 494 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFR-----DSKY 494 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhc-----cchh
Confidence 3556677899999999999998766656899988644 3344567889999999999999999998854 4459
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
+|++||-|-||.+...+.+++ .++...++.++..+++|++|||++ +||.|||||+|.+++.+|.+||.|||
T Consensus 495 vYmLmEaClGGElWTiLrdRg------~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFG 565 (732)
T KOG0614|consen 495 VYMLMEACLGGELWTILRDRG------SFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFG 565 (732)
T ss_pred hhhhHHhhcCchhhhhhhhcC------CcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehh
Confidence 999999999999999999876 789999999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccccccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVD 767 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~ 767 (833)
+|+.+.... ++-.++|||.|.|||++.+...+.++|.|+ .|+.+||+++|..|+...+
T Consensus 566 FAKki~~g~---------KTwTFcGTpEYVAPEIILnKGHD~avDyWa----------LGIli~ELL~G~pPFs~~d--- 623 (732)
T KOG0614|consen 566 FAKKIGSGR---------KTWTFCGTPEYVAPEIILNKGHDRAVDYWA----------LGILIYELLTGSPPFSGVD--- 623 (732)
T ss_pred hHHHhccCC---------ceeeecCCcccccchhhhccCcchhhHHHH----------HHHHHHHHHcCCCCCCCCc---
Confidence 999886643 233578999999999999999999999999 8899999999999987433
Q ss_pred ccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCC-----HHHHHHH
Q 040925 768 PSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMD-----MRDVVAK 820 (833)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~eil~~ 820 (833)
|-.....+-+.. ..-..+..+.+...+++.+....+|.+|-. +.+|-++
T Consensus 624 pmktYn~ILkGi----d~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH 677 (732)
T KOG0614|consen 624 PMKTYNLILKGI----DKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKH 677 (732)
T ss_pred hHHHHHHHHhhh----hhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhh
Confidence 222222111111 111223445666778888999999999975 5555443
No 401
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=3.9e-29 Score=261.26 Aligned_cols=210 Identities=21% Similarity=0.264 Sum_probs=174.4
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCC---cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK---GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
.-|..++.||-|+||+|.++...++...||+|.+++.+. .....++.|.+||+.-..+-||++|..| ++++.
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySF-----QDkdn 703 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSF-----QDKDN 703 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEe-----ccCCc
Confidence 458888999999999999999999999999999975432 2335678899999999999999999774 44559
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.|+||+|++||++-.++-+.+ .+.+.-++.++..+..|+++.|.. |+|||||||+|||||.||.+||.|||
T Consensus 704 LYFVMdYIPGGDmMSLLIrmg------IFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFG 774 (1034)
T KOG0608|consen 704 LYFVMDYIPGGDMMSLLIRMG------IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFG 774 (1034)
T ss_pred eEEEEeccCCccHHHHHHHhc------cCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeecc
Confidence 999999999999999988765 688999999999999999999999 99999999999999999999999999
Q ss_pred cccccCc---------cc------cc------c-------------cccCCCccccccccccccCccccCCCCCCccccc
Q 040925 688 LAKFLSD---------HQ------LD------T-------------AVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDI 733 (833)
Q Consensus 688 ~a~~~~~---------~~------~~------~-------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di 733 (833)
++.-+.- .. +. . ...........+||+.|+|||++....|+..+|+
T Consensus 775 LCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdw 854 (1034)
T KOG0608|consen 775 LCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDW 854 (1034)
T ss_pred ccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchh
Confidence 9853211 00 00 0 0000111235689999999999999999999999
Q ss_pred ccCCcCCCccccCCccHHHHHHHhCCCcccc
Q 040925 734 FTGRRPIDAVFNEGHSLHEFAKTALPEKVME 764 (833)
Q Consensus 734 ~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~ 764 (833)
|| .|+++|||+.|..|+....
T Consensus 855 ws----------~gvil~em~~g~~pf~~~t 875 (1034)
T KOG0608|consen 855 WS----------VGVILYEMLVGQPPFLADT 875 (1034)
T ss_pred hH----------hhHHHHHHhhCCCCccCCC
Confidence 99 8899999999999986443
No 402
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.95 E-value=2.7e-28 Score=268.34 Aligned_cols=282 Identities=16% Similarity=0.181 Sum_probs=185.3
Q ss_pred HhcCCccCceeccCcceEEEEEEEC----------------CCceEEEEEEeeccCCcchh--------------HHHHH
Q 040925 529 ATGEFSSSNMIGQGSFGYVYKGTLG----------------EDEMIVAVKVINLKYKGASR--------------SFVAE 578 (833)
Q Consensus 529 ~~~~y~~~~~lg~G~~g~Vy~~~~~----------------~~~~~vavK~~~~~~~~~~~--------------~~~~E 578 (833)
..++|++.++||+|+||.||+|... ..++.||||+++.......+ ....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 3668999999999999999999752 24567999998654322222 23446
Q ss_pred HHHHhhcCCCc-----cceEeeEeecCCC---CCCceEeEEEEecCCCChhhhhccCCCc------------------cc
Q 040925 579 CEALRNIRHRN-----LIKIITICSSTDF---KGTDFKAFVFEYMENGSLKDWLHQSDDQ------------------VE 632 (833)
Q Consensus 579 ~~~l~~l~h~n-----iv~~~~~~~~~~~---~~~~~~~lv~e~~~~gsL~~~l~~~~~~------------------~~ 632 (833)
+.++.+++|.+ +++++++|..... ...+..++||||+++|+|.++++..... ..
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 77777776654 4677777754321 1234689999999999999998753210 01
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccCcccccccccCCCccccccc
Q 040925 633 VCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKG 712 (833)
Q Consensus 633 ~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~g 712 (833)
...+++..++.++.|++.||.|+|+. +|+||||||+||+++.++.+||+|||++.......... .....+
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~-------~~~g~~ 372 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFN-------PLYGML 372 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccC-------ccccCC
Confidence 12356788999999999999999999 99999999999999999999999999997553321100 111235
Q ss_pred cccccCccccCCCCCCccccc---cc---------CCcCCCccccCCccHHHHHHHhC-CCcccccccccchh--hhccc
Q 040925 713 TVGYVAPEYGMGSEASMTGDI---FT---------GRRPIDAVFNEGHSLHEFAKTAL-PEKVMEIVDPSLLM--EVMTN 777 (833)
Q Consensus 713 t~~y~aPE~~~~~~~~~~~Di---~s---------~~~~~~~~~~~g~~l~~~~~~~~-p~~~~~~~~~~~~~--~~~~~ 777 (833)
|+.|+|||.+.....+..++. |+ +.....|+|+.|++++++..+.. |............. .....
T Consensus 373 tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~ 452 (507)
T PLN03224 373 DPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNR 452 (507)
T ss_pred CcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHH
Confidence 899999998765544444332 21 22224577789999999988765 33211111111100 00000
Q ss_pred --cchhhhhhhhchHHHHHHHHHHhhccCCCCC---CCCCCHHHHHHH
Q 040925 778 --NSMIQEDKRVKTEECLNAIIRTGVLCSMESP---FERMDMRDVVAK 820 (833)
Q Consensus 778 --~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP---~~RPt~~eil~~ 820 (833)
........-.......+...+++.+++..+| .+|+|++|++++
T Consensus 453 ~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 453 WRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred HHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 0000000001122345678899999999866 689999999864
No 403
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.95 E-value=9.9e-31 Score=259.93 Aligned_cols=388 Identities=19% Similarity=0.217 Sum_probs=301.8
Q ss_pred cEEEcCCCcCcccCCccccCCCCCCEEEccCCcccccCCccCCCCCCCCEEEcCC-CcccccCCccccCCCCCcEEECCC
Q 040925 2 QTLAVNDNYLTGQLPDFVGNLSDLEVIRIMGNSLGGKIPTTLGLLRNLVSLNVAE-NKFSGMFPRSICNISSLELIQLAL 80 (833)
Q Consensus 2 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~-n~i~~~~~~~~~~l~~L~~L~L~~ 80 (833)
.+++|..|+|+.+.|.+|+.++.|++|||++|.|+.+-|++|.++++|.+|-+.+ |+|+.+..++|.+|.+|+.|.+.-
T Consensus 70 veirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNa 149 (498)
T KOG4237|consen 70 VEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNA 149 (498)
T ss_pred eEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcCh
Confidence 4789999999988888999999999999999999999999999999999988877 999988899999999999999999
Q ss_pred cccccccCchhhcCCCCccEEEccCCcceeeCCccccCCCCCcEEEcccCc------------cccccCcCccCCCcCce
Q 040925 81 NRFSGNLPFDIVVNLPNLKALAIGGNNFFGSIPYSLSNASNLELLDLSVNQ------------FKGNVSIDFSSLKNLLW 148 (833)
Q Consensus 81 N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~------------i~~~~~~~~~~l~~L~~ 148 (833)
|++. .++.++|..+++|..|.|.+|.+..+.-.+|..+.+++.+++..|. +....+..+++.+...-
T Consensus 150 n~i~-Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p 228 (498)
T KOG4237|consen 150 NHIN-CIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSP 228 (498)
T ss_pred hhhc-chhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecch
Confidence 9998 8999999999999999999999985555599999999999999998 33344556677777777
Q ss_pred EecccccCCCCCCCCcccccccCCCCCCCEEEccCCcCcccCChhHhhhcccccEEEccCccccccCChhhhcCCCCCeE
Q 040925 149 LNLEQNNLGTGTATDLDFVTFLTNCSSLKALSLADNQFGGELPHSIANLSSTVINFGIGRNQISGTIPPGIRNLVNLIGF 228 (833)
Q Consensus 149 L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L 228 (833)
..|.++++..+....+ ...+.++..=..+.+...+..|..-+.-...++.|+|++|+|+.+.+.+|.++..+++|
T Consensus 229 ~rl~~~Ri~q~~a~kf-----~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL 303 (498)
T KOG4237|consen 229 YRLYYKRINQEDARKF-----LCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQEL 303 (498)
T ss_pred HHHHHHHhcccchhhh-----hhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhh
Confidence 7777777776655422 22222332223333434457776666666678889999999999999999999999999
Q ss_pred eccCCcccccCCccccCCCCCCEEEcccccCcccCCccccCCCCCCeEEeeccccc---------------CCCCCCCCC
Q 040925 229 GAEENQLHGTIPDAIGELKNLQKLCLFRNFLQGRIPSGLGNLTKLANLELSSNSLQ---------------GNIPSSLGN 293 (833)
Q Consensus 229 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~---------------~~~~~~~~~ 293 (833)
.|..|+|..+....|.++..|+.|+|.+|+|+...|.+|..+..|.+|+|-.|.+. +.....-+.
T Consensus 304 ~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~~~~~~Cq 383 (498)
T KOG4237|consen 304 YLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKSVVGNPRCQ 383 (498)
T ss_pred hcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhCCCCCCCCCC
Confidence 99999999888889999999999999999999999999999999999999887653 111000111
Q ss_pred -CCccceeecCCceecc---cCCccccc---------ccccceeeecCCCccCCCCCcccccCCCcCEEeccCCcCCCCC
Q 040925 294 -CQNLMSFTASQNKLTG---ALPHQLLS---------ITTLSLYLDLSNNLLNGSLPLQVGHLKNLVILDISSNQFSGVI 360 (833)
Q Consensus 294 -l~~L~~L~l~~N~l~~---~~p~~~~~---------~~~ll~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~ 360 (833)
-..++.+.++++.+.. ..|+.... .+-+-+...-|+..++ .+|..+ -..-++|++.+|.++ .+
T Consensus 384 ~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk-~lp~~i--P~d~telyl~gn~~~-~v 459 (498)
T KOG4237|consen 384 SPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLK-LLPRGI--PVDVTELYLDGNAIT-SV 459 (498)
T ss_pred CCchhccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchh-hcCCCC--CchhHHHhcccchhc-cc
Confidence 1246677777666541 12222111 1111123456666666 445443 245778999999998 55
Q ss_pred CccccCCCCCcEEeecCCccccccCccccCCCCCCeEEccCc
Q 040925 361 PGTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNVSSN 402 (833)
Q Consensus 361 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N 402 (833)
|+. .+.+| .+|+|+|++.......|.++++|.+|-||+|
T Consensus 460 p~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 460 PDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred CHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 655 66677 8999999999888889999999999999886
No 404
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.95 E-value=2.9e-28 Score=250.34 Aligned_cols=239 Identities=26% Similarity=0.331 Sum_probs=189.9
Q ss_pred cceEEEEEEECCCceEEEEEEeeccCCcc-hhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEEEecCCCChh
Q 040925 543 SFGYVYKGTLGEDEMIVAVKVINLKYKGA-SRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLK 621 (833)
Q Consensus 543 ~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~ 621 (833)
+||.||+|+..++++.||+|++....... .+.+.+|++.+++++|+||+++++++.... ..+++|||+++++|.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~-----~~~l~~e~~~~~~L~ 75 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDED-----KLYLVMEYCDGGDLF 75 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCC-----EEEEEEeCCCCCCHH
Confidence 58999999999889999999997654444 678999999999999999999999976554 889999999999999
Q ss_pred hhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccCcccccccc
Q 040925 622 DWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAV 701 (833)
Q Consensus 622 ~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~ 701 (833)
+++.... .+++..++.++.++++|+.|||+. +++|+||+|+||+++.++.++|+|||.+.......
T Consensus 76 ~~~~~~~------~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~----- 141 (244)
T smart00220 76 DLLKKRG------RLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG----- 141 (244)
T ss_pred HHHHhcc------CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc-----
Confidence 9997653 378999999999999999999999 99999999999999999999999999998765432
Q ss_pred cCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchhhhccccchh
Q 040925 702 KTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTNNSMI 781 (833)
Q Consensus 702 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 781 (833)
......++..|+|||...+..++.++|||+ .|..++++.++..|+.... +.....+........
T Consensus 142 ----~~~~~~~~~~~~~pE~~~~~~~~~~~Di~s----------lG~~l~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~ 205 (244)
T smart00220 142 ----LLTTFVGTPEYMAPEVLLGKGYGKAVDVWS----------LGVILYELLTGKPPFPGDD--QLLELFKKIGKPKPP 205 (244)
T ss_pred ----ccccccCCcCCCCHHHHccCCCCchhhHHH----------HHHHHHHHHhCCCCCCCCC--cHHHHHHHHhccCCC
Confidence 112345889999999998888999999999 7888888888877764321 111111111111000
Q ss_pred hhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 782 QEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 782 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
.......++..+.+++.+||..+|++||++.++++
T Consensus 206 ---~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 206 ---FPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred ---CccccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 00000014567899999999999999999999986
No 405
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.95 E-value=2.1e-28 Score=242.51 Aligned_cols=274 Identities=21% Similarity=0.279 Sum_probs=211.1
Q ss_pred hHHHHHHhcCCccCceeccCcceEEEEEEECCC-----ceEEEEEEeeccCC-cchhHHHHHHHHHhhcCCCccceEeeE
Q 040925 523 YAELSKATGEFSSSNMIGQGSFGYVYKGTLGED-----EMIVAVKVINLKYK-GASRSFVAECEALRNIRHRNLIKIITI 596 (833)
Q Consensus 523 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~ 596 (833)
.+++.....+++....+-+|.||.||+|.+++. .+.|-||.++.... -....+..|...+..+.|||+..+.++
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V 355 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV 355 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence 466777778888889999999999999977643 33466777764422 234678899999999999999999999
Q ss_pred eecCCCCCCceEeEEEEecCCCChhhhhccCCC--ccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCee
Q 040925 597 CSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDD--QVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVL 674 (833)
Q Consensus 597 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIl 674 (833)
+.+. ....++++.++.-|+|..++...+. ......++..+...++.|++.|++|||.+ +|||.||..+|.+
T Consensus 356 ~ie~----~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCv 428 (563)
T KOG1024|consen 356 SIED----YATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCV 428 (563)
T ss_pred Eeec----cCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcce
Confidence 8653 3578899999999999999983221 11223677888999999999999999999 9999999999999
Q ss_pred ecCCCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHH
Q 040925 675 LDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFA 754 (833)
Q Consensus 675 l~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~ 754 (833)
||+..++||+|=.+++..-+.... ....+......||+||.+....|+.++|+|| +|+.+||++
T Consensus 429 Idd~LqVkltDsaLSRDLFP~DYh------cLGDnEnRPvkWMslEal~n~~yssasDvWs----------fGVllWELm 492 (563)
T KOG1024|consen 429 IDDQLQVKLTDSALSRDLFPGDYH------CLGDNENRPVKWMSLEALQNSHYSSASDVWS----------FGVLLWELM 492 (563)
T ss_pred ehhheeEEeccchhccccCccccc------ccCCCCCCcccccCHHHHhhhhhcchhhhHH----------HHHHHHHHH
Confidence 999999999999999876543321 1112233567899999999999999999999 556666655
Q ss_pred HH-hCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhhh
Q 040925 755 KT-ALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRET 827 (833)
Q Consensus 755 ~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~~ 827 (833)
+- ..|+. .+||..+..+.+... .-..+-.|++++..+|.-||..+|++||+++|++.-|.+....
T Consensus 493 tlg~~Pya---eIDPfEm~~ylkdGy-----RlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~q 558 (563)
T KOG1024|consen 493 TLGKLPYA---EIDPFEMEHYLKDGY-----RLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQ 558 (563)
T ss_pred hcCCCCcc---ccCHHHHHHHHhccc-----eecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHH
Confidence 53 23322 245555544443322 2234556899999999999999999999999999999887654
No 406
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=9.4e-29 Score=256.58 Aligned_cols=191 Identities=23% Similarity=0.353 Sum_probs=162.2
Q ss_pred HhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC--------CcchhHHHHHHHHHhhcC---CCccceEeeEe
Q 040925 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--------KGASRSFVAECEALRNIR---HRNLIKIITIC 597 (833)
Q Consensus 529 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---h~niv~~~~~~ 597 (833)
...+|+..+.+|.|+||.|+.|.++.....|+||.+.+.. ......+--|+.||..++ |+||+++++++
T Consensus 559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF 638 (772)
T KOG1152|consen 559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF 638 (772)
T ss_pred ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence 3457999999999999999999999999999999986431 111234567999999997 99999999995
Q ss_pred ecCCCCCCceEeEEEEec-CCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeec
Q 040925 598 SSTDFKGTDFKAFVFEYM-ENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLD 676 (833)
Q Consensus 598 ~~~~~~~~~~~~lv~e~~-~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~ 676 (833)
.++ +++|++||-. ++.+|.++|..+. .+++.++..|++|++.|+++||+. ||||||||-+|+.++
T Consensus 639 Edd-----d~yyl~te~hg~gIDLFd~IE~kp------~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd 704 (772)
T KOG1152|consen 639 EDD-----DYYYLETEVHGEGIDLFDFIEFKP------RMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVD 704 (772)
T ss_pred ecC-----CeeEEEecCCCCCcchhhhhhccC------ccchHHHHHHHHHHHhcccccccc---CceecccccccEEEe
Confidence 554 4999999975 5679999999876 799999999999999999999999 999999999999999
Q ss_pred CCCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCC-CcccccccCCcCCCcc
Q 040925 677 HDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEA-SMTGDIFTGRRPIDAV 743 (833)
Q Consensus 677 ~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~s~~~~~~~~ 743 (833)
.+|-+||+|||.|........+ .++||..|.|||++.|.+| ...-|||+.|+.++.+
T Consensus 705 ~~g~~klidfgsaa~~ksgpfd----------~f~gtv~~aapevl~g~~y~gk~qdiwalgillyti 762 (772)
T KOG1152|consen 705 SNGFVKLIDFGSAAYTKSGPFD----------VFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTI 762 (772)
T ss_pred cCCeEEEeeccchhhhcCCCcc----------eeeeeccccchhhhCCCccCCCcchhhhhhheeeEE
Confidence 9999999999999877665443 3569999999999999887 4567999966655543
No 407
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=6e-30 Score=241.60 Aligned_cols=197 Identities=22% Similarity=0.334 Sum_probs=161.5
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccC--CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY--KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
+.+..+.||-|+||.||.+++..+|+.||+|++.... -...+++.+|+.++..++|.|++..+++........=.++|
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 3455689999999999999999999999999985322 22357899999999999999999999886554422223578
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+++|.+.. +|.++|-.-+ .++...+.-+.+||++||+|||+. +|.||||||.|.+++.+..+||||||+|
T Consensus 134 V~TELmQS-DLHKIIVSPQ------~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLA 203 (449)
T KOG0664|consen 134 VLTELMQS-DLHKIIVSPQ------ALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLA 203 (449)
T ss_pred HHHHHHHh-hhhheeccCC------CCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccc
Confidence 89999964 8999887654 788899999999999999999999 9999999999999999999999999999
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCC-CCCcccccccCCcCCCcccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGS-EASMTGDIFTGRRPIDAVFN 745 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Di~s~~~~~~~~~~ 745 (833)
+.-..+.. ...+..+-|.+|+|||+++|. .|+.+.||||.||.|.++..
T Consensus 204 Rvee~d~~-------~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLg 253 (449)
T KOG0664|consen 204 RTWDQRDR-------LNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQ 253 (449)
T ss_pred cccchhhh-------hhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHh
Confidence 86544321 112234578899999999885 49999999998888877643
No 408
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.94 E-value=1.4e-27 Score=244.78 Aligned_cols=278 Identities=18% Similarity=0.226 Sum_probs=204.3
Q ss_pred ccchHHHHHHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcC------CCccceE
Q 040925 520 MVSYAELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIR------HRNLIKI 593 (833)
Q Consensus 520 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~ 593 (833)
.|.+.--+.-..+|.+....|+|-||+|.+|.+...|..||||+++.. +...+.=.+|+++|++|+ --|++++
T Consensus 421 YYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl 499 (752)
T KOG0670|consen 421 YYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN-EVMHKTGLKELEILKKLNDADPEDKFHCLRL 499 (752)
T ss_pred eEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc-hHHhhhhhHHHHHHHHhhccCchhhhHHHHH
Confidence 334433344557899999999999999999999988999999999743 333455678999999994 3578888
Q ss_pred eeEeecCCCCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCe
Q 040925 594 ITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNV 673 (833)
Q Consensus 594 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NI 673 (833)
+..|. ..++.|+|+|-+. .+|.++++..+... .+....+..++.|+.-||..|... ||+|.||||+||
T Consensus 500 ~r~F~-----hknHLClVFE~Ls-lNLRevLKKyG~nv---GL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNi 567 (752)
T KOG0670|consen 500 FRHFK-----HKNHLCLVFEPLS-LNLREVLKKYGRNV---GLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNI 567 (752)
T ss_pred HHHhh-----hcceeEEEehhhh-chHHHHHHHhCccc---ceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccce
Confidence 87744 4459999999986 59999999876543 688899999999999999999998 999999999999
Q ss_pred eecCC-CcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccH--
Q 040925 674 LLDHD-MVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSL-- 750 (833)
Q Consensus 674 ll~~~-~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l-- 750 (833)
|+++. ..+||||||.|..+....... +.-+..|.|||++.|-+|+...|+||.||.+|++|++.+.+
T Consensus 568 LVNE~k~iLKLCDfGSA~~~~eneitP----------YLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG 637 (752)
T KOG0670|consen 568 LVNESKNILKLCDFGSASFASENEITP----------YLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPG 637 (752)
T ss_pred EeccCcceeeeccCccccccccccccH----------HHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCC
Confidence 99865 479999999999877654322 34567899999999999999999999999999998754321
Q ss_pred ---------HHHHHHhCCCcc-------cccccccch-----------hhhccccchhhhh------------hhhchHH
Q 040925 751 ---------HEFAKTALPEKV-------MEIVDPSLL-----------MEVMTNNSMIQED------------KRVKTEE 791 (833)
Q Consensus 751 ---------~~~~~~~~p~~~-------~~~~~~~~~-----------~~~~~~~~~~~~~------------~~~~~~~ 791 (833)
+.-+.|.+|..+ .+-+|..+. .+...-.....+. .......
T Consensus 638 ~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~ 717 (752)
T KOG0670|consen 638 RTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPK 717 (752)
T ss_pred CCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHH
Confidence 111334444221 011111110 0000000001110 0011223
Q ss_pred HHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 792 CLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 792 ~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
...++.+|+..|+..||++|.|..|.+++
T Consensus 718 ~~~~~rdLLdkml~LdP~KRit~nqAL~H 746 (752)
T KOG0670|consen 718 IVQQLRDLLDKMLILDPEKRITVNQALKH 746 (752)
T ss_pred HHHHHHHHHHHHhccChhhcCCHHHHhcC
Confidence 56788999999999999999999998864
No 409
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.94 E-value=6.5e-28 Score=222.46 Aligned_cols=187 Identities=20% Similarity=0.373 Sum_probs=157.0
Q ss_pred HhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcC-CCccceEeeEeecCCCCCCce
Q 040925 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIR-HRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 529 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 607 (833)
..++|++.+++|+|.|++||.|....+.+.++||++++. ..+.+.+|+.|++.++ ||||++++++..++. +..
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~---Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPE---SKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCcc---ccC
Confidence 356899999999999999999999889999999999743 4567899999999997 999999999987654 456
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCC-cEEEccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVCDF 686 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kL~Df 686 (833)
..+|+||+.+.+...+.. .++...++.++.+++.||.|+|+. ||.|||+||.|++||... .++|+|+
T Consensus 110 paLiFE~v~n~Dfk~ly~---------tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDW 177 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLYP---------TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDW 177 (338)
T ss_pred chhHhhhhccccHHHHhh---------hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeec
Confidence 789999999887776654 578889999999999999999999 999999999999999754 7999999
Q ss_pred ccccccCcccccccccCCCccccccccccccCccccCC-CCCCcccccccCCcCCCc
Q 040925 687 GLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG-SEASMTGDIFTGRRPIDA 742 (833)
Q Consensus 687 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~s~~~~~~~ 742 (833)
|+|.++-+.... .-.+.+..|.-||.+.. +.|+..-|+||.||.+..
T Consensus 178 GLAEFYHp~~eY---------nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~ 225 (338)
T KOG0668|consen 178 GLAEFYHPGKEY---------NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS 225 (338)
T ss_pred chHhhcCCCcee---------eeeeehhhcCCchheeechhccccHHHHHHHHHHHH
Confidence 999877543221 11346788899998765 558999999997776544
No 410
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=3.1e-27 Score=223.60 Aligned_cols=254 Identities=19% Similarity=0.233 Sum_probs=190.8
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcC-CCccceEeeEeecCCCCCCceEe
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIR-HRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
+.|.+.+.+|+|.||.+-+|+++.++..+|+|.+.... ...++|.+|...--.+. |.||+.-|++. |+..+.++
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~va----Fqt~d~Yv 98 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVA----FQTSDAYV 98 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHH----hhcCceEE
Confidence 46999999999999999999999999999999997543 34678999988777774 99999988775 56667899
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeec--CCCcEEEcccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLD--HDMVAHVCDFG 687 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~--~~~~~kL~DfG 687 (833)
++|||+|.|+|..-+... .+.+....+++.|++.|+.|||++ ++||||||.+||||- +..++|+||||
T Consensus 99 F~qE~aP~gdL~snv~~~-------GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG 168 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVEAA-------GIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFG 168 (378)
T ss_pred EeeccCccchhhhhcCcc-------cccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecc
Confidence 999999999999988764 477888999999999999999999 999999999999983 34589999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCC---C--CCCcccccccCCcCCCccccCCccHHHHHHHhCCCcc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG---S--EASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKV 762 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~--~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~ 762 (833)
.++..+..-. ....+..|.|||.... + ...+.+|||. +|++++..++|.+||..
T Consensus 169 ~t~k~g~tV~-----------~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~Wq----------fGIi~f~cltG~~PWQk 227 (378)
T KOG1345|consen 169 LTRKVGTTVK-----------YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQ----------FGIIFFYCLTGKFPWQK 227 (378)
T ss_pred cccccCceeh-----------hhhhhcccCCcHHHhhccccceEecccccchh----------eeeeeeeeecCCCcchh
Confidence 9986543211 1235678999996432 2 2567788888 77777778888888885
Q ss_pred cccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 040925 763 MEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKL 821 (833)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L 821 (833)
..+.|+....-...........++ ....+.+...++..+-+.++|++|--..++.++-
T Consensus 228 a~~~d~~Y~~~~~w~~rk~~~~P~-~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~r 285 (378)
T KOG1345|consen 228 ASIMDKPYWEWEQWLKRKNPALPK-KFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMR 285 (378)
T ss_pred hhccCchHHHHHHHhcccCccCch-hhcccCHHHHHHHHHhcCCcccccchhHHHHHHH
Confidence 555665553222111111111111 1222455677888889999999996655555543
No 411
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.94 E-value=5.8e-26 Score=227.74 Aligned_cols=211 Identities=30% Similarity=0.483 Sum_probs=178.9
Q ss_pred eccCcceEEEEEEECCCceEEEEEEeeccCCc-chhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEEEecCC
Q 040925 539 IGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG-ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMEN 617 (833)
Q Consensus 539 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~ 617 (833)
||+|++|.||+|+...+++.+++|++...... ..+.+.+|++.++.++|++|+++++++.... ..+++|||+++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~-----~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDEN-----HLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCC-----eEEEEEecCCC
Confidence 68999999999999877999999999754332 3467999999999999999999999976543 88999999999
Q ss_pred CChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecC-CCcEEEcccccccccCccc
Q 040925 618 GSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDH-DMVAHVCDFGLAKFLSDHQ 696 (833)
Q Consensus 618 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kL~DfG~a~~~~~~~ 696 (833)
++|.+++.... ..+++..++.++.++++++++||+. +++|+||+|.||+++. ++.++|+|||.+.......
T Consensus 76 ~~l~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~ 147 (215)
T cd00180 76 GSLKDLLKENE-----GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDK 147 (215)
T ss_pred CcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCc
Confidence 99999998652 1588999999999999999999999 9999999999999999 8999999999998654432
Q ss_pred ccccccCCCccccccccccccCccccCCC-CCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchhhhc
Q 040925 697 LDTAVKTPSSSIGLKGTVGYVAPEYGMGS-EASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVM 775 (833)
Q Consensus 697 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~~~~ 775 (833)
. ......+...|++||..... .++.++|+|+ .|..++++
T Consensus 148 ~--------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~----------lg~~~~~l---------------------- 187 (215)
T cd00180 148 S--------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWS----------LGVILYEL---------------------- 187 (215)
T ss_pred c--------hhhcccCCCCccChhHhcccCCCCchhhhHH----------HHHHHHHH----------------------
Confidence 1 11123478899999998776 7889999999 66666665
Q ss_pred cccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 776 TNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
..+.+++..|+..||++||+++++++.
T Consensus 188 ------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 ------------------PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ------------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 356789999999999999999999864
No 412
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.93 E-value=5e-27 Score=228.04 Aligned_cols=192 Identities=21% Similarity=0.249 Sum_probs=161.2
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeecc--CCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCC-CCce
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK--YKGASRSFVAECEALRNIRHRNLIKIITICSSTDFK-GTDF 607 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~~~~ 607 (833)
.+|.-.+.+|.|.. .|..|.+.-.++.||+|++... .....++..+|...+..++|+||++++.++...... .-..
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 46788889999998 7888888778999999998644 233457889999999999999999999987654321 2235
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
.|+|||||. ++|.+.+.. .++-.++..+..|++.|++|||+. ||+||||||+||++..++.+||.|||
T Consensus 96 ~y~v~e~m~-~nl~~vi~~--------elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg 163 (369)
T KOG0665|consen 96 VYLVMELMD-ANLCQVILM--------ELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFG 163 (369)
T ss_pred HHHHHHhhh-hHHHHHHHH--------hcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccch
Confidence 799999996 599999883 577889999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVF 744 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~ 744 (833)
+|+..... -..+.++.|..|.|||++.+..+.+.+||||.||.+.++.
T Consensus 164 ~ar~e~~~---------~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli 211 (369)
T KOG0665|consen 164 LARTEDTD---------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELI 211 (369)
T ss_pred hhcccCcc---------cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHh
Confidence 99865433 1233467999999999999988999999999888887654
No 413
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.93 E-value=3.7e-26 Score=230.86 Aligned_cols=276 Identities=24% Similarity=0.326 Sum_probs=191.0
Q ss_pred HHHHhcCCccCceeccCcceEEEEEEECC---CceEEEEEEeeccCCcchhHHHHHHHHHhhcC-CCccceEeeEeecCC
Q 040925 526 LSKATGEFSSSNMIGQGSFGYVYKGTLGE---DEMIVAVKVINLKYKGASRSFVAECEALRNIR-HRNLIKIITICSSTD 601 (833)
Q Consensus 526 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 601 (833)
+......|..+++||+|.|+.||+|++.. .++.||+|.+... ....++.+|++.|..+. +.||+++.+++...
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t--s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnn- 107 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT--SSPSRILNELEMLYRLGGSDNIIKLNGCFRNN- 107 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc--cCchHHHHHHHHHHHhccchhhhcchhhhccC-
Confidence 33445679999999999999999999876 7889999999643 34567999999999995 99999999985544
Q ss_pred CCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecC-CCc
Q 040925 602 FKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDH-DMV 680 (833)
Q Consensus 602 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~-~~~ 680 (833)
+.+++||||++..+..++.. .++..++..+++.+..||+++|.. |||||||||+|++.+. .+.
T Consensus 108 ----d~v~ivlp~~~H~~f~~l~~---------~l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~r 171 (418)
T KOG1167|consen 108 ----DQVAIVLPYFEHDRFRDLYR---------SLSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQR 171 (418)
T ss_pred ----CeeEEEecccCccCHHHHHh---------cCCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCC
Confidence 49999999999988888876 477889999999999999999999 9999999999999975 457
Q ss_pred EEEcccccccccCccc----------------------------------ccc--cccCCCccccccccccccCccccCC
Q 040925 681 AHVCDFGLAKFLSDHQ----------------------------------LDT--AVKTPSSSIGLKGTVGYVAPEYGMG 724 (833)
Q Consensus 681 ~kL~DfG~a~~~~~~~----------------------------------~~~--~~~~~~~~~~~~gt~~y~aPE~~~~ 724 (833)
-.|+|||+|....... ... ............||++|+|||++..
T Consensus 172 g~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k 251 (418)
T KOG1167|consen 172 GVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFR 251 (418)
T ss_pred ceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhh
Confidence 8999999997221100 000 0011112234689999999999776
Q ss_pred C-CCCcccccccCCcCCCccccC----------CccHHHHHHHhCC----------Cc--ccc--c--ccccchh-----
Q 040925 725 S-EASMTGDIFTGRRPIDAVFNE----------GHSLHEFAKTALP----------EK--VME--I--VDPSLLM----- 772 (833)
Q Consensus 725 ~-~~~~~~Di~s~~~~~~~~~~~----------g~~l~~~~~~~~p----------~~--~~~--~--~~~~~~~----- 772 (833)
. ..+++.||||.|+++-.+.+. -..+.|+++-.-+ .. ..+ . ..++...
T Consensus 252 ~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~ 331 (418)
T KOG1167|consen 252 CPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETL 331 (418)
T ss_pred ccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhcc
Confidence 4 478999999877665322111 1122333222111 00 000 0 0001100
Q ss_pred --hhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 773 --EVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 773 --~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
+............+...+..+..+.+++.+|++.||.+|.|+++.++.
T Consensus 332 ~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 332 HIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred ChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 001110000011222233344578999999999999999999999875
No 414
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.92 E-value=4.1e-25 Score=232.92 Aligned_cols=185 Identities=20% Similarity=0.195 Sum_probs=138.8
Q ss_pred HHHHHhcCCccCceeccCcceEEEEEEECC-CceEEEEEEeeccC-----CcchhHHHHHHHHHhhcCCCccce-EeeEe
Q 040925 525 ELSKATGEFSSSNMIGQGSFGYVYKGTLGE-DEMIVAVKVINLKY-----KGASRSFVAECEALRNIRHRNLIK-IITIC 597 (833)
Q Consensus 525 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~-~~~~~ 597 (833)
......++|++.+.||+|+||+||+|++.. +++.||||++.... ....+.+.+|++++++++|+|++. ++++
T Consensus 12 ~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~- 90 (365)
T PRK09188 12 QIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT- 90 (365)
T ss_pred ccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc-
Confidence 344556789999999999999999999875 67888999875321 123456899999999999999985 4332
Q ss_pred ecCCCCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCC-CCCCeeec
Q 040925 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDL-KPSNVLLD 676 (833)
Q Consensus 598 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dl-kp~NIll~ 676 (833)
+..++||||++|++|... .. .. ...++.|+++||+|||+. ||+|||| ||+||+++
T Consensus 91 --------~~~~LVmE~~~G~~L~~~-~~---------~~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~ 146 (365)
T PRK09188 91 --------GKDGLVRGWTEGVPLHLA-RP---------HG---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMG 146 (365)
T ss_pred --------CCcEEEEEccCCCCHHHh-Cc---------cc---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEc
Confidence 246899999999999732 11 11 146788999999999999 9999999 99999999
Q ss_pred CCCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCC------CCcccccc
Q 040925 677 HDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSE------ASMTGDIF 734 (833)
Q Consensus 677 ~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~Di~ 734 (833)
.++.+||+|||+|+.+...................+++.|+|||++...+ .+..+|-|
T Consensus 147 ~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 147 PDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred CCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 99999999999999775543222111112223577999999999876432 23446666
No 415
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.92 E-value=5.1e-24 Score=262.03 Aligned_cols=339 Identities=22% Similarity=0.252 Sum_probs=194.5
Q ss_pred CCccccCCCCCCEEEccCCc------ccccCCccCCCC-CCCCEEEcCCCcccccCCccccCCCCCcEEECCCccccccc
Q 040925 15 LPDFVGNLSDLEVIRIMGNS------LGGKIPTTLGLL-RNLVSLNVAENKFSGMFPRSICNISSLELIQLALNRFSGNL 87 (833)
Q Consensus 15 ~~~~~~~l~~L~~L~l~~n~------l~~~~~~~~~~l-~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 87 (833)
.+.+|.++.+|+.|.+.++. +...+|+.|..+ .+|+.|++.+|.++ .+|..| ...+|+.|+|++|++. .+
T Consensus 550 ~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L 626 (1153)
T PLN03210 550 HENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KL 626 (1153)
T ss_pred cHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-cc
Confidence 34567777777777775543 223455656555 35777777777776 556666 4567777777777776 55
Q ss_pred CchhhcCCCCccEEEccCCcceeeCCccccCCCCCcEEEcccCccccccCcCccCCCcCceEecccc-cCCCCCCCCccc
Q 040925 88 PFDIVVNLPNLKALAIGGNNFFGSIPYSLSNASNLELLDLSVNQFKGNVSIDFSSLKNLLWLNLEQN-NLGTGTATDLDF 166 (833)
Q Consensus 88 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~ 166 (833)
+..+ ..+++|+.|+|++|.....+| .++.+++|++|+|++|......+..+..+++|+.|++++| .+..++..
T Consensus 627 ~~~~-~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~---- 700 (1153)
T PLN03210 627 WDGV-HSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTG---- 700 (1153)
T ss_pred cccc-ccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCc----
Confidence 5443 567777777777665433455 3666777777777776544445556677777777777764 34443321
Q ss_pred ccccCCCCCCCEEEccCCcCcccCChhHhhhcccccEEEccCccccccCChhhhcCCCCCeEeccCCcccccCCccccCC
Q 040925 167 VTFLTNCSSLKALSLADNQFGGELPHSIANLSSTVINFGIGRNQISGTIPPGIRNLVNLIGFGAEENQLHGTIPDAIGEL 246 (833)
Q Consensus 167 ~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 246 (833)
.++++|+.|+|++|.....+|.. ..+|++|++++|.+. .+|..+ .+
T Consensus 701 ----i~l~sL~~L~Lsgc~~L~~~p~~----------------------------~~nL~~L~L~~n~i~-~lP~~~-~l 746 (1153)
T PLN03210 701 ----INLKSLYRLNLSGCSRLKSFPDI----------------------------STNISWLDLDETAIE-EFPSNL-RL 746 (1153)
T ss_pred ----CCCCCCCEEeCCCCCCccccccc----------------------------cCCcCeeecCCCccc-cccccc-cc
Confidence 15667777777776544333321 223444444444444 223222 34
Q ss_pred CCCCEEEcccccCc-------ccCCccccCCCCCCeEEeecccccCCCCCCCCCCCccceeecCCceecccCCccccccc
Q 040925 247 KNLQKLCLFRNFLQ-------GRIPSGLGNLTKLANLELSSNSLQGNIPSSLGNCQNLMSFTASQNKLTGALPHQLLSIT 319 (833)
Q Consensus 247 ~~L~~L~L~~N~l~-------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~ 319 (833)
++|++|++.++... ...+..+...++|+.|+|++|.....+|..++++++|+.|++++|...+.+|..+ .+.
T Consensus 747 ~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~ 825 (1153)
T PLN03210 747 ENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLE 825 (1153)
T ss_pred cccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-Ccc
Confidence 44444444442211 1111112223456666666665544555566666666666666554333555443 333
Q ss_pred ccceeeecCCCccCCCCCcccccCCCcCEEeccCCcCCCCCCccccCCCCCcEEeecC-CccccccCccccCCCCCCeEE
Q 040925 320 TLSLYLDLSNNLLNGSLPLQVGHLKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISS-NSFHGVIPLSLSFLKSIKELN 398 (833)
Q Consensus 320 ~ll~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~ 398 (833)
++ +.|++++|..-..+|.. .++|+.|+|++|.++ .+|..+..+++|+.|+|++ |++. .+|..+..+++|+.|+
T Consensus 826 sL-~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~ 899 (1153)
T PLN03210 826 SL-ESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVD 899 (1153)
T ss_pred cc-CEEECCCCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeee
Confidence 33 55666665433334432 356777777777776 4566777777777777777 4455 3555667777777777
Q ss_pred ccCcc
Q 040925 399 VSSNN 403 (833)
Q Consensus 399 l~~N~ 403 (833)
+++|.
T Consensus 900 l~~C~ 904 (1153)
T PLN03210 900 FSDCG 904 (1153)
T ss_pred cCCCc
Confidence 77764
No 416
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.92 E-value=1.2e-24 Score=247.24 Aligned_cols=262 Identities=28% Similarity=0.346 Sum_probs=148.4
Q ss_pred cEEEcCCCcCcccCCccccCCCCCCEEEccCCcccccCCccCCCCCCCCEEEcCCCcccccCCccccCCCCCcEEECCCc
Q 040925 2 QTLAVNDNYLTGQLPDFVGNLSDLEVIRIMGNSLGGKIPTTLGLLRNLVSLNVAENKFSGMFPRSICNISSLELIQLALN 81 (833)
Q Consensus 2 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N 81 (833)
..|+|++|+|+ .+|+.+.. +|+.|++++|+|+ .+|. .+++|++|+|++|+|+. +|.. .++|+.|+|++|
T Consensus 204 ~~LdLs~~~Lt-sLP~~l~~--~L~~L~L~~N~Lt-~LP~---lp~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~Ls~N 272 (788)
T PRK15387 204 AVLNVGESGLT-TLPDCLPA--HITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPVL---PPGLLELSIFSN 272 (788)
T ss_pred cEEEcCCCCCC-cCCcchhc--CCCEEEccCCcCC-CCCC---CCCCCcEEEecCCccCc-ccCc---ccccceeeccCC
Confidence 35777777777 56666653 6777777777774 3443 24677777777777773 4432 356777777777
Q ss_pred ccccccCchhhcCCCCccEEEccCCcceeeCCccccCCCCCcEEEcccCccccccCcCccCCCcCceEecccccCCCCCC
Q 040925 82 RFSGNLPFDIVVNLPNLKALAIGGNNFFGSIPYSLSNASNLELLDLSVNQFKGNVSIDFSSLKNLLWLNLEQNNLGTGTA 161 (833)
Q Consensus 82 ~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 161 (833)
.++ .+|. ...+|+.|+|++|+++ .+|.. +++|++|+|++|+|++++. . ..+|+.|++++|+|+.++.
T Consensus 273 ~L~-~Lp~----lp~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~N~L~~Lp~-l---p~~L~~L~Ls~N~L~~LP~ 339 (788)
T PRK15387 273 PLT-HLPA----LPSGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLASLPA-L---PSELCKLWAYNNQLTSLPT 339 (788)
T ss_pred chh-hhhh----chhhcCEEECcCCccc-ccccc---ccccceeECCCCccccCCC-C---cccccccccccCccccccc
Confidence 776 5553 1255677777777776 34432 3567777777777776543 1 2346666777777765442
Q ss_pred CCcccccccCCCCCCCEEEccCCcCcccCChhHhhhcccccEEEccCccccccCChhhhcCCCCCeEeccCCcccccCCc
Q 040925 162 TDLDFVTFLTNCSSLKALSLADNQFGGELPHSIANLSSTVINFGIGRNQISGTIPPGIRNLVNLIGFGAEENQLHGTIPD 241 (833)
Q Consensus 162 ~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 241 (833)
. ..+|++|+|++|+|+ .+|.. + .+|+.|++++|+|.. +|.
T Consensus 340 l----------p~~Lq~LdLS~N~Ls-~LP~l----p------------------------~~L~~L~Ls~N~L~~-LP~ 379 (788)
T PRK15387 340 L----------PSGLQELSVSDNQLA-SLPTL----P------------------------SELYKLWAYNNRLTS-LPA 379 (788)
T ss_pred c----------ccccceEecCCCccC-CCCCC----C------------------------cccceehhhcccccc-Ccc
Confidence 0 135667777777766 33321 1 234445555555553 232
Q ss_pred cccCCCCCCEEEcccccCcccCCccccCCCCCCeEEeecccccCCCCCCCCCCCccceeecCCceecccCCccccccccc
Q 040925 242 AIGELKNLQKLCLFRNFLQGRIPSGLGNLTKLANLELSSNSLQGNIPSSLGNCQNLMSFTASQNKLTGALPHQLLSITTL 321 (833)
Q Consensus 242 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l 321 (833)
. ..+|+.|+|++|.|++ +|.. .++|+.|++++|+|++ +|..+ .+|+.|++++|+|+ .+|..++.+..+
T Consensus 380 l---~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L 447 (788)
T PRK15387 380 L---PSGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSE 447 (788)
T ss_pred c---ccccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcch---hhhhhhhhccCccc-ccChHHhhccCC
Confidence 2 1345555555555553 3322 2345556666666553 33321 24555666666665 556555555555
Q ss_pred ceeeecCCCccCCCCCccc
Q 040925 322 SLYLDLSNNLLNGSLPLQV 340 (833)
Q Consensus 322 l~~L~ls~N~l~~~~~~~~ 340 (833)
..|+|++|.+++..+..+
T Consensus 448 -~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 448 -TTVNLEGNPLSERTLQAL 465 (788)
T ss_pred -CeEECCCCCCCchHHHHH
Confidence 456666666665544444
No 417
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.92 E-value=1.4e-23 Score=258.22 Aligned_cols=306 Identities=22% Similarity=0.244 Sum_probs=140.0
Q ss_pred CccEEEccCCcceeeCCccccCCCCCcEEEcccCccccccCcCccCCCcCceEeccccc-CCCCCCCCcccccccCCCCC
Q 040925 97 NLKALAIGGNNFFGSIPYSLSNASNLELLDLSVNQFKGNVSIDFSSLKNLLWLNLEQNN-LGTGTATDLDFVTFLTNCSS 175 (833)
Q Consensus 97 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~~~~l~~l~~ 175 (833)
+|+.|++.+|.+. .+|..| .+.+|++|+|++|++..+ +..+..+++|++|+|+++. +..++ .+..+++
T Consensus 590 ~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~~L-~~~~~~l~~Lk~L~Ls~~~~l~~ip--------~ls~l~~ 658 (1153)
T PLN03210 590 KLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLEKL-WDGVHSLTGLRNIDLRGSKNLKEIP--------DLSMATN 658 (1153)
T ss_pred ccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccccc-ccccccCCCCCEEECCCCCCcCcCC--------ccccCCc
Confidence 3555555555554 334444 345555555555555432 2234455555555555432 22221 1344555
Q ss_pred CCEEEccCCcCcccCChhHhhhcccccEEEccCccccccCChhhhcCCCCCeEeccCCcccccCCccccCCCCCCEEEcc
Q 040925 176 LKALSLADNQFGGELPHSIANLSSTVINFGIGRNQISGTIPPGIRNLVNLIGFGAEENQLHGTIPDAIGELKNLQKLCLF 255 (833)
Q Consensus 176 L~~L~Ls~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 255 (833)
|++|+|++|.....+|..+.++.. |+.|++++|...+.+|..+ ++++|+.|++++|.....+|+. ..+|++|+|+
T Consensus 659 Le~L~L~~c~~L~~lp~si~~L~~-L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~ 733 (1153)
T PLN03210 659 LETLKLSDCSSLVELPSSIQYLNK-LEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLD 733 (1153)
T ss_pred ccEEEecCCCCccccchhhhccCC-CCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecC
Confidence 555555555433344444443332 3444444432222333333 4556666666666544344432 2456666666
Q ss_pred cccCcccCCccccCCCCCCeEEeeccccc-------CCCCCCCCCCCccceeecCCceecccCCcccccccccceeeecC
Q 040925 256 RNFLQGRIPSGLGNLTKLANLELSSNSLQ-------GNIPSSLGNCQNLMSFTASQNKLTGALPHQLLSITTLSLYLDLS 328 (833)
Q Consensus 256 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-------~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~ll~~L~ls 328 (833)
+|.+. .+|..+ .+++|+.|++.++... ...+..+...++|+.|++++|...+.+|..+..+..+ +.|+++
T Consensus 734 ~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L-~~L~Ls 810 (1153)
T PLN03210 734 ETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKL-EHLEIE 810 (1153)
T ss_pred CCccc-cccccc-cccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCC-CEEECC
Confidence 66665 344433 3555666666553221 1111112223455555555554444455555444444 445555
Q ss_pred CCccCCCCCcccccCCCcCEEeccCCcCCCCCCccccCCCCCcEEeecCCccccccCccccCCCCCCeEEccCcccCCCc
Q 040925 329 NNLLNGSLPLQVGHLKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNVSSNNLSGQI 408 (833)
Q Consensus 329 ~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 408 (833)
+|..-+.+|..+ ++++|+.|++++|......|.. ..+|+.|+|++|.++ .+|.++..+++|+.|+|++|+-...+
T Consensus 811 ~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l 885 (1153)
T PLN03210 811 NCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRV 885 (1153)
T ss_pred CCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCcc
Confidence 543222344333 4455555555554332222221 234555555555554 23444555555555555542222234
Q ss_pred hhhhcCCCCCceEECccC
Q 040925 409 PEFLKNLSVLEFLSLSYN 426 (833)
Q Consensus 409 p~~l~~l~~L~~L~l~~N 426 (833)
|..+..+++|+.++++++
T Consensus 886 ~~~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 886 SLNISKLKHLETVDFSDC 903 (1153)
T ss_pred CcccccccCCCeeecCCC
Confidence 444445555555555444
No 418
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.91 E-value=2.7e-24 Score=244.54 Aligned_cols=265 Identities=26% Similarity=0.326 Sum_probs=137.5
Q ss_pred CCCEEEcCCCcccccCCccccCCCCCcEEECCCcccccccCchhhcCCCCccEEEccCCcceeeCCccccCCCCCcEEEc
Q 040925 48 NLVSLNVAENKFSGMFPRSICNISSLELIQLALNRFSGNLPFDIVVNLPNLKALAIGGNNFFGSIPYSLSNASNLELLDL 127 (833)
Q Consensus 48 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 127 (833)
+-..|+|++|.++ .+|..+. ++|+.|++++|+|+ .+|. ..++|++|+|++|+|+. +|.. .++|+.|+|
T Consensus 202 ~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~----lp~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~L 269 (788)
T PRK15387 202 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA----LPPELRTLEVSGNQLTS-LPVL---PPGLLELSI 269 (788)
T ss_pred CCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCC----CCCCCcEEEecCCccCc-ccCc---ccccceeec
Confidence 3445555555555 3444443 25555555555555 4543 23556666666666652 3322 245566666
Q ss_pred ccCccccccCcCccCCCcCceEecccccCCCCCCCCcccccccCCCCCCCEEEccCCcCcccCChhHhhhcccccEEEcc
Q 040925 128 SVNQFKGNVSIDFSSLKNLLWLNLEQNNLGTGTATDLDFVTFLTNCSSLKALSLADNQFGGELPHSIANLSSTVINFGIG 207 (833)
Q Consensus 128 ~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~l~~L~l~ 207 (833)
++|.|+.++. -.++|+.|+|++|+|+.++. ..++|+.|+|++|+++ .+|. ++.
T Consensus 270 s~N~L~~Lp~----lp~~L~~L~Ls~N~Lt~LP~----------~p~~L~~LdLS~N~L~-~Lp~----lp~-------- 322 (788)
T PRK15387 270 FSNPLTHLPA----LPSGLCKLWIFGNQLTSLPV----------LPPGLQELSVSDNQLA-SLPA----LPS-------- 322 (788)
T ss_pred cCCchhhhhh----chhhcCEEECcCCccccccc----------cccccceeECCCCccc-cCCC----Ccc--------
Confidence 6666654432 12345556666666654432 1245666666666665 2232 111
Q ss_pred CccccccCChhhhcCCCCCeEeccCCcccccCCccccCCCCCCEEEcccccCcccCCccccCCCCCCeEEeecccccCCC
Q 040925 208 RNQISGTIPPGIRNLVNLIGFGAEENQLHGTIPDAIGELKNLQKLCLFRNFLQGRIPSGLGNLTKLANLELSSNSLQGNI 287 (833)
Q Consensus 208 ~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 287 (833)
+|+.|++++|++++ +|.. ..+|+.|+|++|+|++ +|.. ..+|+.|++++|+|.. +
T Consensus 323 ----------------~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-L 377 (788)
T PRK15387 323 ----------------ELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-L 377 (788)
T ss_pred ----------------cccccccccCcccc-cccc---ccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-C
Confidence 23333444444432 2211 1244555555555542 2321 1344445555555542 3
Q ss_pred CCCCCCCCccceeecCCceecccCCcccccccccceeeecCCCccCCCCCcccccCCCcCEEeccCCcCCCCCCccccCC
Q 040925 288 PSSLGNCQNLMSFTASQNKLTGALPHQLLSITTLSLYLDLSNNLLNGSLPLQVGHLKNLVILDISSNQFSGVIPGTLSTC 367 (833)
Q Consensus 288 ~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l 367 (833)
|.. ..+|+.|++++|+|+ .+|... .. ++.|++++|.+++ +|.. ..+|+.|++++|+|+ .+|..+..+
T Consensus 378 P~l---~~~L~~LdLs~N~Lt-~LP~l~---s~-L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L 444 (788)
T PRK15387 378 PAL---PSGLKELIVSGNRLT-SLPVLP---SE-LKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHL 444 (788)
T ss_pred ccc---ccccceEEecCCccc-CCCCcc---cC-CCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhc
Confidence 322 134555555555555 344321 12 2556777777663 4432 245677888888887 567778888
Q ss_pred CCCcEEeecCCccccccCcccc
Q 040925 368 VCLEYLDISSNSFHGVIPLSLS 389 (833)
Q Consensus 368 ~~L~~L~Ls~N~l~~~~~~~~~ 389 (833)
++|+.|+|++|+|++..+..+.
T Consensus 445 ~~L~~LdLs~N~Ls~~~~~~L~ 466 (788)
T PRK15387 445 SSETTVNLEGNPLSERTLQALR 466 (788)
T ss_pred cCCCeEECCCCCCCchHHHHHH
Confidence 8888888888888876665553
No 419
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.91 E-value=9e-24 Score=214.17 Aligned_cols=199 Identities=32% Similarity=0.461 Sum_probs=169.3
Q ss_pred CccCceeccCcceEEEEEEECCCceEEEEEEeeccCCc-chhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEE
Q 040925 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG-ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFV 611 (833)
Q Consensus 533 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 611 (833)
|++.+.||+|++|.||+|...++++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++.... ..+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~-----~~~~v 75 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPE-----PLYLV 75 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCC-----ceEEE
Confidence 56778999999999999999988899999999765444 5678999999999999999999999875544 78999
Q ss_pred EEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccc
Q 040925 612 FEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKF 691 (833)
Q Consensus 612 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 691 (833)
+||+++++|.+++..... .+++..+..++.+++.++.|||+. +++|+|++|+||+++.++.++|+|||.+..
T Consensus 76 ~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~ 147 (225)
T smart00221 76 MEYCEGGDLFDYLRKKGG-----KLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARF 147 (225)
T ss_pred EeccCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeE
Confidence 999999999999987541 178999999999999999999999 999999999999999999999999999987
Q ss_pred cCcccccccccCCCccccccccccccCcccc-CCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCc
Q 040925 692 LSDHQLDTAVKTPSSSIGLKGTVGYVAPEYG-MGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEK 761 (833)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~ 761 (833)
...... .......++..|++||.. ....++.++|+|+ +|..++++.++..|+.
T Consensus 148 ~~~~~~-------~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~----------lG~~~~~l~~g~~pf~ 201 (225)
T smart00221 148 IHRDLA-------ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWS----------LGVILYELLWGPEPFS 201 (225)
T ss_pred ecCccc-------ccccceeccCCcCCHhHhcCCCCCCchhhHHH----------HHHHHHHHHHCCCCcc
Confidence 654320 011234578899999988 6667888999999 7788899998888764
No 420
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=6.5e-23 Score=200.01 Aligned_cols=269 Identities=20% Similarity=0.267 Sum_probs=208.6
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcC-CCccceEeeEeecCCCCCCceEe
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIR-HRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
-.|++.++||+|+||+++.|+.--++++||||.-... ...-.+..|.+.++.|. .++|..+|.+..+. .+-.
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk--S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG-----~~Ni 100 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK--SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEG-----KYNI 100 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEecccc--CCcchHHHHHHHHHHHcCCCCCCceeeecccc-----chhh
Confidence 3799999999999999999999989999999986433 23456888999999985 79999998775443 3678
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCC-----cEEEc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM-----VAHVC 684 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~-----~~kL~ 684 (833)
+|||.. |.||+|+..-.++ .++..++..+|.|++.-++|+|++ .+|.|||||+|+||+.-+ .+.++
T Consensus 101 LVidLL-GPSLEDLFD~CgR-----~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~Ihii 171 (449)
T KOG1165|consen 101 LVIDLL-GPSLEDLFDLCGR-----RFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHII 171 (449)
T ss_pred hhhhhh-CcCHHHHHHHhcC-----cccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEE
Confidence 999998 7899999987654 799999999999999999999999 999999999999997543 68999
Q ss_pred ccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccc
Q 040925 685 DFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVME 764 (833)
Q Consensus 685 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~ 764 (833)
|||+|+.+.++....... -....+..||.+||+-....|.+.+.+.|+=+ .|.++..++.|.+||.-..
T Consensus 172 DFGmAK~YrDp~TkqHIP-YrE~KSLsGTARYMSINTHlGrEQSRRDDLEa----------LGHvFmYFLRGsLPWQGLK 240 (449)
T KOG1165|consen 172 DFGMAKEYRDPKTKQHIP-YREHKSLSGTARYMSINTHLGREQSRRDDLEA----------LGHVFMYFLRGSLPWQGLK 240 (449)
T ss_pred eccchhhhcCccccccCc-cccccccccceeeeEeeccccchhhhhhhHHH----------hhhhhhhhccCCCcccccc
Confidence 999999988776544432 22345678999999999999999999988555 7888888899999987433
Q ss_pred cccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhhh
Q 040925 765 IVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRET 827 (833)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~~ 827 (833)
........+.+.......+. +...+.++.++..-+.-.-..+-.+-|..+-+...+..+.+.
T Consensus 241 A~tnK~kYeKIGe~Kr~T~i-~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr 302 (449)
T KOG1165|consen 241 ADTNKEKYEKIGETKRSTPI-EVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDR 302 (449)
T ss_pred CcchHHHHHHhccccccCCH-HHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHh
Confidence 33333333333322222221 222345677777777777778999999988887777666543
No 421
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=7.9e-23 Score=217.62 Aligned_cols=269 Identities=20% Similarity=0.253 Sum_probs=196.1
Q ss_pred CCccCceeccCcceEEEEEEECCCc-eEEEEEEeeccCCcchhHHHHHHHHHhhcCC----CccceEeeEeecCCCCCCc
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDE-MIVAVKVINLKYKGASRSFVAECEALRNIRH----RNLIKIITICSSTDFKGTD 606 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~~~~~~~~~~~~~~~ 606 (833)
+|.+.+.||+|+||.||.|.+..++ ..+|+|............+..|..++..+.. +++..+++... ....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~----~~~~ 94 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGR----STED 94 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEecc----CCCc
Confidence 7999999999999999999987664 6789998765433333378889999999963 68888888763 2334
Q ss_pred eEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCC-----CcE
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHD-----MVA 681 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~-----~~~ 681 (833)
+.++||+.+ |.+|.++......+ .++..++.+++.|++.+|+++|+. |++||||||+|++++.. ..+
T Consensus 95 ~~~iVM~l~-G~sL~dl~~~~~~~----~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~ 166 (322)
T KOG1164|consen 95 FNFIVMSLL-GPSLEDLRKRNPPG----RFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTL 166 (322)
T ss_pred eeEEEEecc-CccHHHHHHhCCCC----CcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceE
Confidence 789999998 67999988665522 799999999999999999999999 99999999999999865 369
Q ss_pred EEccccccc--ccCcccccccccCCCc-cccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhC
Q 040925 682 HVCDFGLAK--FLSDHQLDTAVKTPSS-SIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTAL 758 (833)
Q Consensus 682 kL~DfG~a~--~~~~~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~ 758 (833)
.|.|||+|+ ......... ...... ...+.||..|+++.+..+.+.+.+.|+|| ....+.++..+..
T Consensus 167 ~llDfGlar~~~~~~~~~~~-~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles----------~~Y~l~el~~g~L 235 (322)
T KOG1164|consen 167 YLLDFGLARRFKYVGDSGGN-LRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLES----------LFYMLLELLKGSL 235 (322)
T ss_pred EEEecCCCccccccCCCCcc-cccCCCCccCCCCccccccHHHhCCCccCCchhhhh----------HHHHHHHHhcCCC
Confidence 999999998 332222111 011111 23467999999999999999999999999 6667888888888
Q ss_pred CCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhhh
Q 040925 759 PEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRET 827 (833)
Q Consensus 759 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~~ 827 (833)
||...+..+................ .....+..+.++...+-..+..++|....+.+.++.....
T Consensus 236 PW~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 236 PWEALEMTDLKSKFEKDPRKLLTDR----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred CCccccccchHHHHHHHhhhhcccc----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 8853332211111100000000000 1111344566666666668999999999999998777654
No 422
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=3.3e-23 Score=193.15 Aligned_cols=271 Identities=22% Similarity=0.265 Sum_probs=199.1
Q ss_pred HhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCC-CccceEeeEeecCCCCCCce
Q 040925 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRH-RNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 529 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~~~~ 607 (833)
..+.|.++++||+|+||.+|.|....+|+.||+|+-+... ....+..|..+.+.+++ ..|..+..|..+. .+
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~-----~y 85 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEK-----DY 85 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhcccc-----cc
Confidence 4578999999999999999999999999999999875332 23467889999999974 6777777664443 37
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecC---CCcEEEc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDH---DMVAHVC 684 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kL~ 684 (833)
-.+||+.. |.||+++..-... .++..+++.++-|++.-++|+|.+ ++|||||||+|+|++- ...+.++
T Consensus 86 nvlVMdLL-GPsLEdLfnfC~R-----~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LI 156 (341)
T KOG1163|consen 86 NVLVMDLL-GPSLEDLFNFCSR-----RFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLI 156 (341)
T ss_pred ceeeeecc-CccHHHHHHHHhh-----hhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEE
Confidence 78999998 7899998875543 689999999999999999999999 9999999999999963 3479999
Q ss_pred ccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccc
Q 040925 685 DFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVME 764 (833)
Q Consensus 685 DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~ 764 (833)
|||+|+.+.+........ ........||.+|.+-....+.+.+...|+=| .|.++..+..+.+||.-..
T Consensus 157 DFGLaKky~d~~t~~HIp-yre~r~ltGTaRYASinAh~g~eqSRRDDmeS----------vgYvLmYfnrG~LPWQglk 225 (341)
T KOG1163|consen 157 DFGLAKKYRDIRTRQHIP-YREDRNLTGTARYASINAHLGIEQSRRDDMES----------VGYVLMYFNRGSLPWQGLK 225 (341)
T ss_pred eccchhhhccccccccCc-cccCCccceeeeehhhhhhhhhhhhhhhhhhh----------hcceeeeeecCCCcccccc
Confidence 999999876644333221 12233467999999988888877888888666 5555556666777776333
Q ss_pred cccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhhh
Q 040925 765 IVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRET 827 (833)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~~ 827 (833)
........+.+.......+ .+.-.+.+|.++.-.+..|-..--++-|...-+.+.+..+...
T Consensus 226 a~tk~QKyEkI~EkK~s~~-ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ 287 (341)
T KOG1163|consen 226 AATKKQKYEKISEKKMSTP-IEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRT 287 (341)
T ss_pred hhhHHHHHHHHHHhhcCCC-HHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhh
Confidence 2222222222222211111 1222345667778888889999999999987777766655544
No 423
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.88 E-value=1.1e-23 Score=251.96 Aligned_cols=208 Identities=13% Similarity=0.148 Sum_probs=136.5
Q ss_pred hcCC-CccceEeeEeecCCCC--CCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCC
Q 040925 584 NIRH-RNLIKIITICSSTDFK--GTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQ 660 (833)
Q Consensus 584 ~l~h-~niv~~~~~~~~~~~~--~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~ 660 (833)
.++| +||.++++++...... ....++.+|||+ +++|.+++.... ..+++.+++.+++||++||+|||++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~-- 99 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD-----RSVDAFECFHVFRQIVEIVNAAHSQ-- 99 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc-----ccccHHHHHHHHHHHHHHHHHHHhC--
Confidence 4456 6888888876333211 123567788988 569999997532 1589999999999999999999999
Q ss_pred CCceeeCCCCCCeeecCCC-------------------cEEEcccccccccCcccc------ccccc--CCCcccccccc
Q 040925 661 PPMVHGDLKPSNVLLDHDM-------------------VAHVCDFGLAKFLSDHQL------DTAVK--TPSSSIGLKGT 713 (833)
Q Consensus 661 ~~ivH~Dlkp~NIll~~~~-------------------~~kL~DfG~a~~~~~~~~------~~~~~--~~~~~~~~~gt 713 (833)
||+||||||+|||++..+ .+|++|||+++....... ..... ........+||
T Consensus 100 -gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt 178 (793)
T PLN00181 100 -GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEM 178 (793)
T ss_pred -CeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCC
Confidence 999999999999996544 455666666543211000 00000 00011224689
Q ss_pred ccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchhhhccccchhhhhhhhchHHHH
Q 040925 714 VGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECL 793 (833)
Q Consensus 714 ~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
+.|||||++.+..++.++|||| +|+++||++++..|...... .......... ++ ......
T Consensus 179 ~~Y~APE~~~~~~~~~~sDVwS----------lGviL~ELl~~~~~~~~~~~----~~~~~~~~~~--~~----~~~~~~ 238 (793)
T PLN00181 179 SWYTSPEEDNGSSSNCASDVYR----------LGVLLFELFCPVSSREEKSR----TMSSLRHRVL--PP----QILLNW 238 (793)
T ss_pred cceEChhhhccCCCCchhhhhh----------HHHHHHHHhhCCCchhhHHH----HHHHHHHhhc--Ch----hhhhcC
Confidence 9999999999999999999999 77778888776555331110 0000000000 00 001112
Q ss_pred HHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 794 NAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 794 ~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
....+++.+||++||.+|||+.|+++.
T Consensus 239 ~~~~~~~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 239 PKEASFCLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred HHHHHHHHHhCCCChhhCcChHHHhhc
Confidence 345678889999999999999999764
No 424
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.87 E-value=2.4e-22 Score=195.07 Aligned_cols=169 Identities=20% Similarity=0.206 Sum_probs=127.5
Q ss_pred CChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccCcccc
Q 040925 618 GSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQL 697 (833)
Q Consensus 618 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~ 697 (833)
|||.+++...+. .+++.+++.|+.|++.||+|||+. + ||+||+++.++.+|+ ||.++......
T Consensus 1 GsL~~~l~~~~~-----~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~- 63 (176)
T smart00750 1 VSLADILEVRGR-----PLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ- 63 (176)
T ss_pred CcHHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc-
Confidence 689999986432 699999999999999999999999 6 999999999999999 99987654321
Q ss_pred cccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchhhhccc
Q 040925 698 DTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTN 777 (833)
Q Consensus 698 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~ 777 (833)
..||+.|||||++.+..++.++|||| +|+++|+++++..|+........ ........
T Consensus 64 ------------~~g~~~y~aPE~~~~~~~~~~~DiwS----------lG~il~elltg~~p~~~~~~~~~-~~~~~~~~ 120 (176)
T smart00750 64 ------------SRVDPYFMAPEVIQGQSYTEKADIYS----------LGITLYEALDYELPYNEERELSA-ILEILLNG 120 (176)
T ss_pred ------------CCCcccccChHHhcCCCCcchhhHHH----------HHHHHHHHHhCCCCccccchhcH-HHHHHHHH
Confidence 14899999999999999999999999 88899999999988753221111 11111111
Q ss_pred cchhhhhhhhchHHHHH--HHHHHhhccCCCCCCCCCCHHHHHHHHHHhhh
Q 040925 778 NSMIQEDKRVKTEECLN--AIIRTGVLCSMESPFERMDMRDVVAKLCHTRE 826 (833)
Q Consensus 778 ~~~~~~~~~~~~~~~~~--~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~ 826 (833)
.....+..+........ .+.+++.+||..||++|||+.|+++.+..+..
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 121 MPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred hccCCccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 11111111122233333 68999999999999999999999999877754
No 425
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.87 E-value=2.9e-22 Score=229.89 Aligned_cols=139 Identities=19% Similarity=0.332 Sum_probs=82.3
Q ss_pred CCCEEEccCCcccccCCccCCCCCCCCEEEcCCCcccccCCccccCCCCCcEEECCCcccccccCchhhcCCCCccEEEc
Q 040925 24 DLEVIRIMGNSLGGKIPTTLGLLRNLVSLNVAENKFSGMFPRSICNISSLELIQLALNRFSGNLPFDIVVNLPNLKALAI 103 (833)
Q Consensus 24 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L 103 (833)
+...|+++++.++ .+|..+. ++|+.|+|++|+|+ .+|..+. ++|++|+|++|+++ .+|..+. ++|+.|+|
T Consensus 179 ~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~---~~L~~L~L 248 (754)
T PRK15370 179 NKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP---DTIQEMEL 248 (754)
T ss_pred CceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh---ccccEEEC
Confidence 4566667766663 3555443 46667777777776 3444443 36777777777766 5665432 35677777
Q ss_pred cCCcceeeCCccccCCCCCcEEEcccCccccccCcCccCCCcCceEecccccCCCCCCCCcccccccCCCCCCCEEEccC
Q 040925 104 GGNNFFGSIPYSLSNASNLELLDLSVNQFKGNVSIDFSSLKNLLWLNLEQNNLGTGTATDLDFVTFLTNCSSLKALSLAD 183 (833)
Q Consensus 104 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~ 183 (833)
++|++. .+|..+. ++|+.|+|++|+|+.++. .+. ++|+.|+|++|+|+.++.. + .++|+.|++++
T Consensus 249 s~N~L~-~LP~~l~--s~L~~L~Ls~N~L~~LP~-~l~--~sL~~L~Ls~N~Lt~LP~~-------l--p~sL~~L~Ls~ 313 (754)
T PRK15370 249 SINRIT-ELPERLP--SALQSLDLFHNKISCLPE-NLP--EELRYLSVYDNSIRTLPAH-------L--PSGITHLNVQS 313 (754)
T ss_pred cCCccC-cCChhHh--CCCCEEECcCCccCcccc-ccC--CCCcEEECCCCccccCccc-------c--hhhHHHHHhcC
Confidence 777766 4454442 467777777777765443 222 3677777777777654421 1 13566666777
Q ss_pred CcCc
Q 040925 184 NQFG 187 (833)
Q Consensus 184 N~l~ 187 (833)
|+++
T Consensus 314 N~Lt 317 (754)
T PRK15370 314 NSLT 317 (754)
T ss_pred Cccc
Confidence 7666
No 426
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.87 E-value=6.3e-23 Score=231.13 Aligned_cols=258 Identities=19% Similarity=0.223 Sum_probs=191.6
Q ss_pred ccCceeccCcceEEEEEEECCCceEEEEEEeecc---CCcc---hhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCce
Q 040925 534 SSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK---YKGA---SRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 534 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~---~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 607 (833)
.....+|.|++|.|+.+......+.++.|.++.. .... ...+..|+.+-..++|||++..+..+.+.. .
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~-----~ 395 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEID-----G 395 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcc-----c
Confidence 3457899999998888888766666666655421 1111 122566777888889999988877754443 3
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFG 687 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 687 (833)
..-+||||++ +|..++.... .++..++..++.|++.|++|+|+. ||.|||+||+|+++..+|.+||+|||
T Consensus 396 ~~~~mE~~~~-Dlf~~~~~~~------~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg 465 (601)
T KOG0590|consen 396 ILQSMEYCPY-DLFSLVMSNG------KLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFG 465 (601)
T ss_pred chhhhhcccH-HHHHHHhccc------ccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecC
Confidence 3344999999 9999998763 578889999999999999999999 99999999999999999999999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCCCCCCcc-cccccCCcCCCccccCCccHHHHHHHhCCCcccccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMT-GDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIV 766 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~ 766 (833)
.+....-+... ......+++|+.+|+|||++.+.+|.+. .|||| .|+++..|..+..||......
T Consensus 466 ~~~vf~~~~e~----~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS----------~~ii~~~m~~~~~~Wk~a~~~ 531 (601)
T KOG0590|consen 466 AASVFRYPWEK----NIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWS----------CGIIYICMILGRFPWKVAKKS 531 (601)
T ss_pred cceeeccCcch----hhhhhcCcccCCcCcCcccccccccCcchhhhhh----------ccceEEEEecCCCcccccccc
Confidence 98765433221 1234456889999999999999998754 79999 555666667777777766555
Q ss_pred cccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 767 DPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
|................+........+.....++.++++.||.+|.|+++|++.
T Consensus 532 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 532 DNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred ccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 554322222222223333334445567778899999999999999999999864
No 427
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.87 E-value=3.4e-22 Score=229.25 Aligned_cols=247 Identities=25% Similarity=0.364 Sum_probs=140.3
Q ss_pred CCCCEEEcCCCcccccCCccccCCCCCcEEECCCcccccccCchhhcCCCCccEEEccCCcceeeCCccccCCCCCcEEE
Q 040925 47 RNLVSLNVAENKFSGMFPRSICNISSLELIQLALNRFSGNLPFDIVVNLPNLKALAIGGNNFFGSIPYSLSNASNLELLD 126 (833)
Q Consensus 47 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 126 (833)
.+.+.|+|++++++ .+|..+. ++|+.|+|++|+|+ .+|...+ ++|+.|+|++|.++ .+|..+. .+|+.|+
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~---~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~ 247 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ---GNIKTLYANSNQLT-SIPATLP--DTIQEME 247 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc---cCCCEEECCCCccc-cCChhhh--ccccEEE
Confidence 45677778777777 4565553 46777777777777 6776554 46777777777776 3455442 4677777
Q ss_pred cccCccccccCcCccCCCcCceEecccccCCCCCCCCcccccccCCCCCCCEEEccCCcCcccCChhHhhhcccccEEEc
Q 040925 127 LSVNQFKGNVSIDFSSLKNLLWLNLEQNNLGTGTATDLDFVTFLTNCSSLKALSLADNQFGGELPHSIANLSSTVINFGI 206 (833)
Q Consensus 127 L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~l~~L~l 206 (833)
|++|+|..++.. +. ++|+.|+|++|+|+.++.. +. ++|+.|+|++|+|+ .+|..+.
T Consensus 248 Ls~N~L~~LP~~-l~--s~L~~L~Ls~N~L~~LP~~-------l~--~sL~~L~Ls~N~Lt-~LP~~lp----------- 303 (754)
T PRK15370 248 LSINRITELPER-LP--SALQSLDLFHNKISCLPEN-------LP--EELRYLSVYDNSIR-TLPAHLP----------- 303 (754)
T ss_pred CcCCccCcCChh-Hh--CCCCEEECcCCccCccccc-------cC--CCCcEEECCCCccc-cCcccch-----------
Confidence 777777755432 22 3567777777777654431 11 35666677666666 2332211
Q ss_pred cCccccccCChhhhcCCCCCeEeccCCcccccCCccccCCCCCCEEEcccccCcccCCccccCCCCCCeEEeecccccCC
Q 040925 207 GRNQISGTIPPGIRNLVNLIGFGAEENQLHGTIPDAIGELKNLQKLCLFRNFLQGRIPSGLGNLTKLANLELSSNSLQGN 286 (833)
Q Consensus 207 ~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 286 (833)
++|+.|++++|++.. +|..+. ++|+.|++++|.+++ +|..+. ++|+.|+|++|+|+ .
T Consensus 304 ----------------~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~ 360 (754)
T PRK15370 304 ----------------SGITHLNVQSNSLTA-LPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-V 360 (754)
T ss_pred ----------------hhHHHHHhcCCcccc-CCcccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-c
Confidence 245555666666653 333221 456666666666663 444443 46666666666665 3
Q ss_pred CCCCCCCCCccceeecCCceecccCCcccccccccceeeecCCCccCCCCCcc----cccCCCcCEEeccCCcCC
Q 040925 287 IPSSLGNCQNLMSFTASQNKLTGALPHQLLSITTLSLYLDLSNNLLNGSLPLQ----VGHLKNLVILDISSNQFS 357 (833)
Q Consensus 287 ~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~~~~----~~~l~~L~~L~ls~N~l~ 357 (833)
+|..+. ++|+.|++++|+++ .+|..+.. .++.|++++|+++ .+|.. ++.++++..|++.+|.++
T Consensus 361 LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~~---sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 361 LPETLP--PTITTLDVSRNALT-NLPENLPA---ALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred CChhhc--CCcCEEECCCCcCC-CCCHhHHH---HHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 444332 45666666666665 44543321 1245555555555 33332 223355556666666554
No 428
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.86 E-value=1.2e-21 Score=190.28 Aligned_cols=141 Identities=18% Similarity=0.148 Sum_probs=109.3
Q ss_pred CceeccCcceEEEEEEECCCceEEEEEEeeccCCcc---------h-----------------hHHHHHHHHHhhcCCCc
Q 040925 536 SNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGA---------S-----------------RSFVAECEALRNIRHRN 589 (833)
Q Consensus 536 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~---------~-----------------~~~~~E~~~l~~l~h~n 589 (833)
...||+|++|.||+|... +|+.||||+++...... . .....|++.+.++.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 468999999999999997 89999999997542111 0 12235999999998877
Q ss_pred cceEeeEeecCCCCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHH-hhcCCCCceeeCC
Q 040925 590 LIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYL-HHHCQPPMVHGDL 668 (833)
Q Consensus 590 iv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~L-H~~~~~~ivH~Dl 668 (833)
+.....+.. . ..++||||++++++........ .+++.++..++.|++.+|.|+ |+. ||+||||
T Consensus 81 v~~p~~~~~-~------~~~iVmE~i~g~~l~~~~~~~~------~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDl 144 (190)
T cd05147 81 IPCPEPILL-K------SHVLVMEFIGDDGWAAPRLKDA------PLSESKARELYLQVIQIMRILYQDC---RLVHADL 144 (190)
T ss_pred CCCCcEEEe-c------CCEEEEEEeCCCCCcchhhhcC------CCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence 644333211 1 2379999999877765433222 688999999999999999999 688 9999999
Q ss_pred CCCCeeecCCCcEEEcccccccccCc
Q 040925 669 KPSNVLLDHDMVAHVCDFGLAKFLSD 694 (833)
Q Consensus 669 kp~NIll~~~~~~kL~DfG~a~~~~~ 694 (833)
||+||+++ ++.++|+|||+|.....
T Consensus 145 kP~NIli~-~~~v~LiDFG~a~~~~~ 169 (190)
T cd05147 145 SEYNLLYH-DGKLYIIDVSQSVEHDH 169 (190)
T ss_pred CHHHEEEE-CCcEEEEEccccccCCC
Confidence 99999998 57899999999975433
No 429
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.84 E-value=1.4e-20 Score=184.03 Aligned_cols=140 Identities=21% Similarity=0.194 Sum_probs=111.2
Q ss_pred CceeccCcceEEEEEEECCCceEEEEEEeeccCCcc--------------------------hhHHHHHHHHHhhcCCCc
Q 040925 536 SNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGA--------------------------SRSFVAECEALRNIRHRN 589 (833)
Q Consensus 536 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--------------------------~~~~~~E~~~l~~l~h~n 589 (833)
...||+|++|.||+|++. +|+.||||+++...... ...+..|.+.+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 578999999999999987 89999999997542110 112357899999999998
Q ss_pred cceEeeEeecCCCCCCceEeEEEEecCCCChhhh-hccCCCccccccCCHHHHHHHHHHHHHHHHHHhh-cCCCCceeeC
Q 040925 590 LIKIITICSSTDFKGTDFKAFVFEYMENGSLKDW-LHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH-HCQPPMVHGD 667 (833)
Q Consensus 590 iv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~-~~~~~ivH~D 667 (833)
+.....+... ..++||||++|+++... +.. . .++..++..++.|++.++.++|+ . ||+|||
T Consensus 81 i~~p~~~~~~-------~~~lVmE~~~g~~~~~~~l~~-~------~~~~~~~~~i~~~l~~~l~~lH~~~---givHrD 143 (190)
T cd05145 81 VPVPEPILLK-------KNVLVMEFIGDDGSPAPRLKD-V------PLEEEEAEELYEQVVEQMRRLYQEA---GLVHGD 143 (190)
T ss_pred CCCceEEEec-------CCEEEEEEecCCCchhhhhhh-c------cCCHHHHHHHHHHHHHHHHHHHHhC---CEecCC
Confidence 7544443221 24799999998755433 322 1 57788999999999999999999 8 999999
Q ss_pred CCCCCeeecCCCcEEEcccccccccCc
Q 040925 668 LKPSNVLLDHDMVAHVCDFGLAKFLSD 694 (833)
Q Consensus 668 lkp~NIll~~~~~~kL~DfG~a~~~~~ 694 (833)
|||+||+++ ++.++|+|||+|+....
T Consensus 144 lkP~NIll~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 144 LSEYNILYH-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred CChhhEEEE-CCCEEEEEcccceecCC
Confidence 999999998 88999999999986654
No 430
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.84 E-value=2.3e-22 Score=190.48 Aligned_cols=248 Identities=20% Similarity=0.283 Sum_probs=187.3
Q ss_pred ccCceeccCcceEEEEEEECCCceEEEEEEeecc--CCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEE
Q 040925 534 SSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK--YKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFV 611 (833)
Q Consensus 534 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 611 (833)
....+|.+...|+.|+|++. |..+++|++... .....++|..|.-.++-+.||||+.++|.|..+. ...++
T Consensus 193 nl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnspp-----nlv~i 265 (448)
T KOG0195|consen 193 NLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPP-----NLVII 265 (448)
T ss_pred hhhhhhccCCCccccccccc--CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCC-----CceEe
Confidence 34467889999999999996 445777877533 3334578999999999999999999999998776 88999
Q ss_pred EEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEc--ccccc
Q 040925 612 FEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVC--DFGLA 689 (833)
Q Consensus 612 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~--DfG~a 689 (833)
..||+.|+|+.++++...- .++..++.+++.++++|++|||+.. |-|----+.+..+++|++.+++|. |--++
T Consensus 266 sq~mp~gslynvlhe~t~v----vvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarismad~kfs 340 (448)
T KOG0195|consen 266 SQYMPFGSLYNVLHEQTSV----VVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISMADTKFS 340 (448)
T ss_pred eeeccchHHHHHHhcCccE----EEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheecccceee
Confidence 9999999999999987643 5788899999999999999999983 333344589999999999988774 32222
Q ss_pred cccCcccccccccCCCccccccccccccCccccCCCCC---CcccccccCCcCCCccccCCccHHHHHHHhCCCcccccc
Q 040925 690 KFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEA---SMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIV 766 (833)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~ 766 (833)
.. ..+..-.|.||+||.++..+. ..++|+|| +.+.++|+.+..+|+......
T Consensus 341 fq---------------e~gr~y~pawmspealqrkped~n~raadmws----------faillwel~trevpfadlspm 395 (448)
T KOG0195|consen 341 FQ---------------EVGRAYSPAWMSPEALQRKPEDLNIRAADMWS----------FAILLWELNTREVPFADLSPM 395 (448)
T ss_pred ee---------------ccccccCcccCCHHHHhcCchhcchhhhhHHH----------HHHHHHHhhccccccccCCch
Confidence 11 112346789999999877653 35789888 677788889999887643333
Q ss_pred cccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhh
Q 040925 767 DPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTR 825 (833)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~ 825 (833)
.-.+..... ......++.....+.+++.-|+..||.+||.++.|+-.|+++.
T Consensus 396 ecgmkiale-------glrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 396 ECGMKIALE-------GLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred hhhhhhhhc-------cccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 222221111 0111224456778889999999999999999999999998864
No 431
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.83 E-value=1.8e-20 Score=183.07 Aligned_cols=170 Identities=15% Similarity=0.150 Sum_probs=130.1
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhH---------HHHHHHHHhhcCCCccceEeeEeecC
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRS---------FVAECEALRNIRHRNLIKIITICSST 600 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l~h~niv~~~~~~~~~ 600 (833)
.++|++.+.+|.|+||.||++.. ++..+|+|.++.......+. +.+|+..+.++.||+|..+.+++...
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 57899999999999999999766 46679999997554333322 68999999999999999999886543
Q ss_pred CC---CCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecC
Q 040925 601 DF---KGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDH 677 (833)
Q Consensus 601 ~~---~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~ 677 (833)
.. ......++||||++|.+|.++.. ++. ....+++.++..+|+. |++|||+||+||+++.
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~----------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~ 170 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE----------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSK 170 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh----------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeC
Confidence 21 11346899999999999988732 222 2456999999999999 9999999999999999
Q ss_pred CCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcC
Q 040925 678 DMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRP 739 (833)
Q Consensus 678 ~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~ 739 (833)
+| ++|+|||.+........ ...+.....+..++|+|+.|+.
T Consensus 171 ~g-i~liDfg~~~~~~e~~a--------------------~d~~vler~y~~~~di~~lg~~ 211 (232)
T PRK10359 171 NG-LRIIDLSGKRCTAQRKA--------------------KDRIDLERHYGIKNEIKDLGYY 211 (232)
T ss_pred CC-EEEEECCCcccccchhh--------------------HHHHHHHhHhcccccccceeEe
Confidence 88 99999998875432211 0113444557789999995544
No 432
>PRK10345 hypothetical protein; Provisional
Probab=99.82 E-value=1.5e-19 Score=176.78 Aligned_cols=140 Identities=18% Similarity=0.302 Sum_probs=109.6
Q ss_pred CccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhc-----CCCccceEeeEeecCCCCCCce
Q 040925 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNI-----RHRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 533 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~~~~ 607 (833)
+.-.+.||+|++|.||. ++.++.. +||++........+.+.+|+.+++.+ .||||++++|++.+.. +.+.
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~--g~g~ 78 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDC--GTGY 78 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCC--CCeE
Confidence 34457999999999995 6666665 69998765444567899999999999 5799999999986653 2234
Q ss_pred -EeEEEEe--cCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHH-HHHhhcCCCCceeeCCCCCCeeecC----CC
Q 040925 608 -KAFVFEY--MENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAM-EYLHHHCQPPMVHGDLKPSNVLLDH----DM 679 (833)
Q Consensus 608 -~~lv~e~--~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL-~~LH~~~~~~ivH~Dlkp~NIll~~----~~ 679 (833)
..+|||| +++|||.+++.+. .+++. ..++.|++.++ +|||+. +|+||||||+||+++. ++
T Consensus 79 v~~~I~e~~G~~~~tL~~~l~~~-------~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~ 146 (210)
T PRK10345 79 VYDVIADFDGKPSITLTEFAEQC-------RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEV 146 (210)
T ss_pred EEEEEecCCCCcchhHHHHHHcc-------cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCC
Confidence 3478999 5579999999753 34444 35678888888 999999 9999999999999974 34
Q ss_pred cEEEcccccc
Q 040925 680 VAHVCDFGLA 689 (833)
Q Consensus 680 ~~kL~DfG~a 689 (833)
.++|+||+.+
T Consensus 147 ~~~LiDg~G~ 156 (210)
T PRK10345 147 IPVVCDNIGE 156 (210)
T ss_pred cEEEEECCCC
Confidence 8999995444
No 433
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.80 E-value=7.5e-19 Score=190.39 Aligned_cols=262 Identities=28% Similarity=0.394 Sum_probs=189.4
Q ss_pred CccCceeccCcceEEEEEEECCCceEEEEEEeeccCCc---chhHHHHHHHHHhhcCCC-ccceEeeEeecCCCCCCceE
Q 040925 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG---ASRSFVAECEALRNIRHR-NLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 533 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~-niv~~~~~~~~~~~~~~~~~ 608 (833)
|.+.+.||.|+||.||++.+. ..+|+|.+...... ....+.+|+.+++.+.|+ +++++++++.... ..
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~-----~~ 73 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEG-----SL 73 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCC-----EE
Confidence 677889999999999999987 67899999755333 357799999999999988 7999999974433 57
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCC-cEEEcccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM-VAHVCDFG 687 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kL~DfG 687 (833)
+++++|+.++++.+++...... ..++......++.|++.++.|+|+. +++|||+||+||+++..+ .++++|||
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg 147 (384)
T COG0515 74 YLVMEYVDGGSLEDLLKKIGRK---GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFG 147 (384)
T ss_pred EEEEecCCCCcHHHHHHhcccc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccC
Confidence 9999999999999777754321 2588899999999999999999999 999999999999999988 79999999
Q ss_pred cccccCcccccccccCCCccccccccccccCccccCC---CCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccc
Q 040925 688 LAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG---SEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVME 764 (833)
Q Consensus 688 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~ 764 (833)
.++............ .......||..|+|||...+ ..++...|+|+ .|..++++..+..|+....
T Consensus 148 ~~~~~~~~~~~~~~~--~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s----------~g~~~~~~~~~~~p~~~~~ 215 (384)
T COG0515 148 LAKLLPDPGSTSSIP--ALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWS----------LGITLYELLTGLPPFEGEK 215 (384)
T ss_pred cceecCCCCcccccc--ccccccccccccCCHHHhcCCCCCCCCchHhHHH----------HHHHHHHHHhCCCCCCCCC
Confidence 998554432111000 12334679999999999887 57899999997 5566777777777743222
Q ss_pred cc-cccchhhhccccchh--h-hhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHH
Q 040925 765 IV-DPSLLMEVMTNNSMI--Q-EDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAK 820 (833)
Q Consensus 765 ~~-~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 820 (833)
.. ........+...... . .............+.+++..|+..+|..|.++.+....
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 216 NSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 10 000000111100000 0 00000001123567888999999999999998887664
No 434
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.79 E-value=3.6e-19 Score=169.64 Aligned_cols=191 Identities=15% Similarity=0.062 Sum_probs=133.1
Q ss_pred CccCceeccCcceEEEEEEECCCceEEEEEEeeccCC----cchhHHHHHHHHHhhcC-CCccceEeeEeecCCCCCCce
Q 040925 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK----GASRSFVAECEALRNIR-HRNLIKIITICSSTDFKGTDF 607 (833)
Q Consensus 533 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 607 (833)
+.+...|++|+||+||.+.. .+.+++.+.+..... .....+.+|+++|+++. |++|++++++. .
T Consensus 4 ~~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~---------~ 72 (218)
T PRK12274 4 PAVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD---------G 72 (218)
T ss_pred cccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc---------C
Confidence 34568999999999998766 577788777753322 11235789999999995 58899998861 4
Q ss_pred EeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCC-CCCCeeecCCCcEEEccc
Q 040925 608 KAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDL-KPSNVLLDHDMVAHVCDF 686 (833)
Q Consensus 608 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dl-kp~NIll~~~~~~kL~Df 686 (833)
.+++|||++|.+|.+.... ....++.|++.+|.++|+. ||+|||| ||+||+++.++.++|+||
T Consensus 73 ~~lvmeyI~G~~L~~~~~~-------------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDF 136 (218)
T PRK12274 73 RHLDRSYLAGAAMYQRPPR-------------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDF 136 (218)
T ss_pred EEEEEeeecCccHHhhhhh-------------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEEC
Confidence 6899999999888754321 1134778999999999999 9999999 799999999999999999
Q ss_pred ccccccCccccc------ccccCCCccccccccccccCccccCCC-CCC-cccccccCCcCCCccccCCccHHHHHHHhC
Q 040925 687 GLAKFLSDHQLD------TAVKTPSSSIGLKGTVGYVAPEYGMGS-EAS-MTGDIFTGRRPIDAVFNEGHSLHEFAKTAL 758 (833)
Q Consensus 687 G~a~~~~~~~~~------~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~-~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~ 758 (833)
|+|......... .....- ...-...++.|++|+...-- ..+ ...++++ .|..+|.++++.+
T Consensus 137 G~A~~~~~~~~~~r~L~~rDl~~l-lk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~----------~g~~~~~~~~~~~ 205 (218)
T PRK12274 137 QLAVRGNPRARWMRLLAREDLRHL-LKHKRMYCPAALTPVERRVLKRTSWIRELWFA----------TGKPVYRFVTRRV 205 (218)
T ss_pred CCceecCCcchHHHHHHHHHHHHH-HHHHHhcCCCCCCHHHHhhhccchhHHHHHHH----------hcchHHHHHhccC
Confidence 999854432210 000000 00112367788888742211 122 3334334 7888899999887
Q ss_pred CCc
Q 040925 759 PEK 761 (833)
Q Consensus 759 p~~ 761 (833)
+..
T Consensus 206 ~~~ 208 (218)
T PRK12274 206 LHW 208 (218)
T ss_pred Ccc
Confidence 754
No 435
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.78 E-value=9.6e-20 Score=181.94 Aligned_cols=206 Identities=19% Similarity=0.245 Sum_probs=136.4
Q ss_pred CCCccceEeeEeecCC----------------------CCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHH
Q 040925 586 RHRNLIKIITICSSTD----------------------FKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVN 643 (833)
Q Consensus 586 ~h~niv~~~~~~~~~~----------------------~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~ 643 (833)
+|||||+++++|.+.- .......|+||..++. +|++++..+ ..+.....-
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~-------~~s~r~~~~ 345 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTR-------HRSYRTGRV 345 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcC-------CCchHHHHH
Confidence 5999999998875421 1224568999999975 999999876 356677888
Q ss_pred HHHHHHHHHHHHhhcCCCCceeeCCCCCCeee--cCCC--cEEEcccccccccCcccccccccCCCccccccccccccCc
Q 040925 644 IAIDVASAMEYLHHHCQPPMVHGDLKPSNVLL--DHDM--VAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAP 719 (833)
Q Consensus 644 i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll--~~~~--~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 719 (833)
++.|+++|+.|||.+ ||.|||+|++||++ |+|+ .+.++|||++-........-...+. ....-|...-|||
T Consensus 346 ~laQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~--~Vd~GGNa~lmAP 420 (598)
T KOG4158|consen 346 ILAQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESD--EVDLGGNAKLMAP 420 (598)
T ss_pred HHHHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccc--cccCCCcceecch
Confidence 999999999999999 99999999999998 4444 6889999998654432222111111 1123478889999
Q ss_pred cccCCCC------CCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchhhhccccchhhhhhhhchHHHH
Q 040925 720 EYGMGSE------ASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECL 793 (833)
Q Consensus 720 E~~~~~~------~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (833)
|+....+ --.|+|.|+.|...+++|.....+|. .|. . ..+.+- +... .-...++.++
T Consensus 421 Ei~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~--rGe-----m-~L~~r~---Yqe~------qLPalp~~vp 483 (598)
T KOG4158|consen 421 EIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYK--RGE-----M-LLDTRT---YQES------QLPALPSRVP 483 (598)
T ss_pred hhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccc--cch-----h-eechhh---hhhh------hCCCCcccCC
Confidence 9865432 23578989855544444444333333 000 0 011100 0000 0112245567
Q ss_pred HHHHHHhhccCCCCCCCCCCHHHHHHHH
Q 040925 794 NAIIRTGVLCSMESPFERMDMRDVVAKL 821 (833)
Q Consensus 794 ~~l~~li~~cl~~dP~~RPt~~eil~~L 821 (833)
+.+.+++...+++||++|++..-....+
T Consensus 484 p~~rqlV~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 484 PVARQLVFDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred hHHHHHHHHHhcCCccccCCccHHHhHH
Confidence 7888999999999999999976555443
No 436
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.78 E-value=3e-21 Score=170.69 Aligned_cols=177 Identities=26% Similarity=0.439 Sum_probs=131.0
Q ss_pred CCCCCEEEcccccCcccCCccccCCCCCCeEEeecccccCCCCCCCCCCCccceeecCCceecccCCcccccccccceee
Q 040925 246 LKNLQKLCLFRNFLQGRIPSGLGNLTKLANLELSSNSLQGNIPSSLGNCQNLMSFTASQNKLTGALPHQLLSITTLSLYL 325 (833)
Q Consensus 246 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~ll~~L 325 (833)
+.+++.|.||+|+++ .+|..++.+.+|+.|++++|+|+ ..|..++.++.|+ .|
T Consensus 32 ~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr-------------------------~l 84 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLR-------------------------IL 84 (264)
T ss_pred hhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhh-------------------------he
Confidence 344555555555555 44445555555555555555555 4444455555444 45
Q ss_pred ecCCCccCCCCCcccccCCCcCEEeccCCcCCC-CCCccccCCCCCcEEeecCCccccccCccccCCCCCCeEEccCccc
Q 040925 326 DLSNNLLNGSLPLQVGHLKNLVILDISSNQFSG-VIPGTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNVSSNNL 404 (833)
Q Consensus 326 ~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l 404 (833)
+++-|++. +.|..|+.++.|+.|||++|.+.. ..|+.|-.+..|+.|+|++|.+. .+|...+++++|+.|.+.+|.+
T Consensus 85 nvgmnrl~-~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndl 162 (264)
T KOG0617|consen 85 NVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDL 162 (264)
T ss_pred ecchhhhh-cCccccCCCchhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCch
Confidence 55555555 778888889999999999988864 67888888999999999999998 7788899999999999999998
Q ss_pred CCCchhhhcCCCCCceEECccCcCccccCCCCcc---CCCccccccCCcCC
Q 040925 405 SGQIPEFLKNLSVLEFLSLSYNHFEGEVPTKGVF---SNKTKISLQGNMKL 452 (833)
Q Consensus 405 ~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~---~~~~~l~l~~N~~~ 452 (833)
- .+|+.++.++.|+.|.+++|.++-.||..+.+ .+.....+..|||.
T Consensus 163 l-~lpkeig~lt~lrelhiqgnrl~vlppel~~l~l~~~k~v~r~E~NPwv 212 (264)
T KOG0617|consen 163 L-SLPKEIGDLTRLRELHIQGNRLTVLPPELANLDLVGNKQVMRMEENPWV 212 (264)
T ss_pred h-hCcHHHHHHHHHHHHhcccceeeecChhhhhhhhhhhHHHHhhhhCCCC
Confidence 8 68899999999999999999999999887654 34455667888885
No 437
>smart00090 RIO RIO-like kinase.
Probab=99.78 E-value=1.3e-18 Score=174.95 Aligned_cols=144 Identities=19% Similarity=0.155 Sum_probs=113.4
Q ss_pred CCccCceeccCcceEEEEEE-ECCCceEEEEEEeeccCCc------------------------chhHHHHHHHHHhhcC
Q 040925 532 EFSSSNMIGQGSFGYVYKGT-LGEDEMIVAVKVINLKYKG------------------------ASRSFVAECEALRNIR 586 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~-~~~~~~~vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~ 586 (833)
.|++.+.||+|++|.||+|. +..+|+.||+|+++..... ....+.+|++.+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 48889999999999999998 6568999999999743210 0123568999999997
Q ss_pred CC--ccceEeeEeecCCCCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCC-c
Q 040925 587 HR--NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPP-M 663 (833)
Q Consensus 587 h~--niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~-i 663 (833)
+. .+.+++++ . ..++||||++++++........ .....++..++.|++.++++||+. | |
T Consensus 109 ~~~i~~p~~~~~---~------~~~lV~E~~~g~~L~~~~~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---g~i 170 (237)
T smart00090 109 EAGVPVPKPIAW---R------RNVLVMEFIGGDGLPAPRLKDV------EPEEEEEFELYDDILEEMRKLYKE---GEL 170 (237)
T ss_pred hcCCCCCeeeEe---c------CceEEEEEecCCcccccccccC------CcchHHHHHHHHHHHHHHHHHHhc---CCE
Confidence 53 34455543 1 2479999999988876653322 355667789999999999999999 9 9
Q ss_pred eeeCCCCCCeeecCCCcEEEcccccccccCc
Q 040925 664 VHGDLKPSNVLLDHDMVAHVCDFGLAKFLSD 694 (833)
Q Consensus 664 vH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 694 (833)
+||||||+||+++ ++.++|+|||.|.....
T Consensus 171 iH~Dikp~NIli~-~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 171 VHGDLSEYNILVH-DGKVVIIDVSQSVELDH 200 (237)
T ss_pred EeCCCChhhEEEE-CCCEEEEEChhhhccCC
Confidence 9999999999999 88999999999875443
No 438
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.78 E-value=1.2e-20 Score=202.46 Aligned_cols=154 Identities=22% Similarity=0.320 Sum_probs=79.2
Q ss_pred EEEcCCCcCc-ccCCccccCCCCCCEEEccCCccccc----CCccCCCCCCCCEEEcCCCcccc------cCCccccCCC
Q 040925 3 TLAVNDNYLT-GQLPDFVGNLSDLEVIRIMGNSLGGK----IPTTLGLLRNLVSLNVAENKFSG------MFPRSICNIS 71 (833)
Q Consensus 3 ~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~L~~n~i~~------~~~~~~~~l~ 71 (833)
.|+|..+.++ ...+..|..+..|+.|+++++.++.. ++..+...++|++|+++++.+.+ ..+..|..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 4667777776 34445566666677777777776332 34445566667777777766651 2233455556
Q ss_pred CCcEEECCCcccccccCchhhcCCCC---ccEEEccCCccee----eCCccccCC-CCCcEEEcccCcccccc----CcC
Q 040925 72 SLELIQLALNRFSGNLPFDIVVNLPN---LKALAIGGNNFFG----SIPYSLSNA-SNLELLDLSVNQFKGNV----SID 139 (833)
Q Consensus 72 ~L~~L~L~~N~l~~~~~~~~~~~l~~---L~~L~L~~N~l~~----~~~~~~~~l-~~L~~L~L~~N~i~~~~----~~~ 139 (833)
+|+.|++++|.+.+ .....|..+.+ |++|++++|++++ .+...+..+ ++|++|+|++|.+++.. ...
T Consensus 82 ~L~~L~l~~~~~~~-~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~ 160 (319)
T cd00116 82 GLQELDLSDNALGP-DGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKA 160 (319)
T ss_pred ceeEEEccCCCCCh-hHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHH
Confidence 66666666666542 22222233333 5555555555541 112223334 55555555555554211 112
Q ss_pred ccCCCcCceEecccccCC
Q 040925 140 FSSLKNLLWLNLEQNNLG 157 (833)
Q Consensus 140 ~~~l~~L~~L~L~~N~l~ 157 (833)
|..+++|++|+|++|.++
T Consensus 161 ~~~~~~L~~L~l~~n~l~ 178 (319)
T cd00116 161 LRANRDLKELNLANNGIG 178 (319)
T ss_pred HHhCCCcCEEECcCCCCc
Confidence 333444555555554443
No 439
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.76 E-value=4.4e-20 Score=197.99 Aligned_cols=285 Identities=23% Similarity=0.287 Sum_probs=153.6
Q ss_pred EEECCCcccccccCchhhcCCCCccEEEccCCccee----eCCccccCCCCCcEEEcccCccccc------cCcCccCCC
Q 040925 75 LIQLALNRFSGNLPFDIVVNLPNLKALAIGGNNFFG----SIPYSLSNASNLELLDLSVNQFKGN------VSIDFSSLK 144 (833)
Q Consensus 75 ~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~L~~N~i~~~------~~~~~~~l~ 144 (833)
.|+|+.+.+++.--...|..+.+|+.|++++|.++. .++..+...++|++|+++++.+.+. ....|..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 467777777633334556777778888888888743 2444566677788888888776521 122345566
Q ss_pred cCceEecccccCCCCCCCCcccccccCCCCCCCEEEccCCcCcccCChhHhhhcccccEEEccCccccccCChhhhcC-C
Q 040925 145 NLLWLNLEQNNLGTGTATDLDFVTFLTNCSSLKALSLADNQFGGELPHSIANLSSTVINFGIGRNQISGTIPPGIRNL-V 223 (833)
Q Consensus 145 ~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l-~ 223 (833)
+|+.|++++|.+....... +...... ++|++|++++|++++.... .+...+..+ +
T Consensus 82 ~L~~L~l~~~~~~~~~~~~--~~~l~~~-~~L~~L~ls~~~~~~~~~~---------------------~l~~~l~~~~~ 137 (319)
T cd00116 82 GLQELDLSDNALGPDGCGV--LESLLRS-SSLQELKLNNNGLGDRGLR---------------------LLAKGLKDLPP 137 (319)
T ss_pred ceeEEEccCCCCChhHHHH--HHHHhcc-CcccEEEeeCCccchHHHH---------------------HHHHHHHhCCC
Confidence 6666666666664321110 1111112 3466666666665521111 112234444 6
Q ss_pred CCCeEeccCCcccc----cCCccccCCCCCCEEEcccccCccc----CCccccCCCCCCeEEeecccccCC----CCCCC
Q 040925 224 NLIGFGAEENQLHG----TIPDAIGELKNLQKLCLFRNFLQGR----IPSGLGNLTKLANLELSSNSLQGN----IPSSL 291 (833)
Q Consensus 224 ~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~ 291 (833)
+|+.|++++|.+++ ..+..+..+++|++|+|++|.+++. ++..+..+++|+.|+|++|.+.+. ++..+
T Consensus 138 ~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~ 217 (319)
T cd00116 138 ALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETL 217 (319)
T ss_pred CceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHh
Confidence 67777777777663 2334455666777777777777632 223344556777777777776533 22345
Q ss_pred CCCCccceeecCCceecccCCcccccccccceeeecCCCccCCCCCcccccCCCcCEEeccCCcCCC----CCCccccCC
Q 040925 292 GNCQNLMSFTASQNKLTGALPHQLLSITTLSLYLDLSNNLLNGSLPLQVGHLKNLVILDISSNQFSG----VIPGTLSTC 367 (833)
Q Consensus 292 ~~l~~L~~L~l~~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~----~~~~~~~~l 367 (833)
..+++|+.|++++|.+++.....+... .....+.|+.|++++|.++. .....+..+
T Consensus 218 ~~~~~L~~L~ls~n~l~~~~~~~l~~~--------------------~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~ 277 (319)
T cd00116 218 ASLKSLEVLNLGDNNLTDAGAAALASA--------------------LLSPNISLLTLSLSCNDITDDGAKDLAEVLAEK 277 (319)
T ss_pred cccCCCCEEecCCCcCchHHHHHHHHH--------------------HhccCCCceEEEccCCCCCcHHHHHHHHHHhcC
Confidence 556667777777776653111111110 00013456666666665541 122234444
Q ss_pred CCCcEEeecCCccccc----cCccccCC-CCCCeEEccCcc
Q 040925 368 VCLEYLDISSNSFHGV----IPLSLSFL-KSIKELNVSSNN 403 (833)
Q Consensus 368 ~~L~~L~Ls~N~l~~~----~~~~~~~l-~~L~~L~l~~N~ 403 (833)
++|+++++++|.+... ....+... +.|++|++.+|.
T Consensus 278 ~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (319)
T cd00116 278 ESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDS 318 (319)
T ss_pred CCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCC
Confidence 5666666666666533 22233333 556666666554
No 440
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.76 E-value=2.5e-20 Score=164.84 Aligned_cols=165 Identities=32% Similarity=0.507 Sum_probs=132.4
Q ss_pred hhhcCCCCCeEeccCCcccccCCccccCCCCCCEEEcccccCcccCCccccCCCCCCeEEeecccccCCCCCCCCCCCcc
Q 040925 218 GIRNLVNLIGFGAEENQLHGTIPDAIGELKNLQKLCLFRNFLQGRIPSGLGNLTKLANLELSSNSLQGNIPSSLGNCQNL 297 (833)
Q Consensus 218 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 297 (833)
.+-++.+.+.|.|++|+++ ..|..+..+.+|+.|++++|+|. ..|..++.+++|+.|+++-|++. ..|..|+.++.|
T Consensus 28 gLf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~l 104 (264)
T KOG0617|consen 28 GLFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPAL 104 (264)
T ss_pred cccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchh
Confidence 3446677888999999999 56677899999999999999998 68899999999999999999998 899999999999
Q ss_pred ceeecCCceecc-cCCcccccccccceeeecCCCccCCCCCcccccCCCcCEEeccCCcCCCCCCccccCCCCCcEEeec
Q 040925 298 MSFTASQNKLTG-ALPHQLLSITTLSLYLDLSNNLLNGSLPLQVGHLKNLVILDISSNQFSGVIPGTLSTCVCLEYLDIS 376 (833)
Q Consensus 298 ~~L~l~~N~l~~-~~p~~~~~~~~ll~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls 376 (833)
+.|+|++|.+.+ .+|..++.+..+ +-|+|+.|.+. ++|..++++++|+.|.+..|.+- ..|..++.+++|++|++.
T Consensus 105 evldltynnl~e~~lpgnff~m~tl-ralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiq 181 (264)
T KOG0617|consen 105 EVLDLTYNNLNENSLPGNFFYMTTL-RALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQ 181 (264)
T ss_pred hhhhccccccccccCCcchhHHHHH-HHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcc
Confidence 999999999873 467777777776 66777777777 67777777777777777777776 566677777777777777
Q ss_pred CCccccccCcccc
Q 040925 377 SNSFHGVIPLSLS 389 (833)
Q Consensus 377 ~N~l~~~~~~~~~ 389 (833)
+|+++ +.|..++
T Consensus 182 gnrl~-vlppel~ 193 (264)
T KOG0617|consen 182 GNRLT-VLPPELA 193 (264)
T ss_pred cceee-ecChhhh
Confidence 77776 4443333
No 441
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.75 E-value=1.7e-19 Score=201.59 Aligned_cols=255 Identities=21% Similarity=0.224 Sum_probs=180.2
Q ss_pred CCccCceeccCcceEEEEEEECCCceEEEEEEeeccC-CcchhHHHHHHHH--HhhcCCCccceEeeEeecCCCCCCceE
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY-KGASRSFVAECEA--LRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~--l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
+|...+.||++.|=+|.+|+++ .|. |+||++-... .-..+.+.++++- ...++|||++.+.-+- ......
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~-eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~-----~t~kAA 96 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR-EGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVL-----VTDKAA 96 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC-Cce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHH-----HhhHHH
Confidence 5778899999999999999997 455 8999985443 2233444444333 4445899999887652 233467
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
|+|=+|..+ +|+|.+..++ -+...+.+-|+.|++.||..+|.. ||+|||||.+||||+.=.-+.|+||..
T Consensus 97 ylvRqyvkh-nLyDRlSTRP------FL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAs 166 (1431)
T KOG1240|consen 97 YLVRQYVKH-NLYDRLSTRP------FLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFAS 166 (1431)
T ss_pred HHHHHHHhh-hhhhhhccch------HHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccc
Confidence 888899976 9999998765 678888899999999999999999 999999999999999988999999976
Q ss_pred cccc--CcccccccccCCCccccccccccccCccccCC----------CC-CCcccccccCCcCCCccccCCccHHHHHH
Q 040925 689 AKFL--SDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG----------SE-ASMTGDIFTGRRPIDAVFNEGHSLHEFAK 755 (833)
Q Consensus 689 a~~~--~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----------~~-~~~~~Di~s~~~~~~~~~~~g~~l~~~~~ 755 (833)
-+.. +.+..... .........-..|.|||.+.. .. .+++-||||.||.+.++|..|..++++..
T Consensus 167 FKPtYLPeDNPadf---~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQ 243 (1431)
T KOG1240|consen 167 FKPTYLPEDNPADF---TFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQ 243 (1431)
T ss_pred cCCccCCCCCcccc---eEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHH
Confidence 5432 11111000 000111122346999996543 12 56778999999998888888888877644
Q ss_pred HhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHH
Q 040925 756 TALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCH 823 (833)
Q Consensus 756 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~ 823 (833)
-. .+......+++...+.+.. ..+..++..|++.||++|-++++.++.-..
T Consensus 244 L~-aYr~~~~~~~e~~Le~Ied----------------~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG 294 (1431)
T KOG1240|consen 244 LL-AYRSGNADDPEQLLEKIED----------------VSLRNLILSMIQRDPSKRLSAEDYLQKYRG 294 (1431)
T ss_pred HH-hHhccCccCHHHHHHhCcC----------------ccHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence 32 2222223344443332221 246788899999999999999999988443
No 442
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.73 E-value=4.5e-18 Score=171.46 Aligned_cols=240 Identities=20% Similarity=0.222 Sum_probs=150.3
Q ss_pred CccCceeccCcceEEEEEEECCCceEEEEEEeeccCCc---chhHHHHHHHHHhhcC----------CCccceEeeEeec
Q 040925 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG---ASRSFVAECEALRNIR----------HRNLIKIITICSS 599 (833)
Q Consensus 533 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~----------h~niv~~~~~~~~ 599 (833)
+...+.||.|+++.||.+++.++++.+|||++...... ..+.+.+|.-....+. |-.++.-++....
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 45668999999999999999999999999998644322 2356666665555432 2223333333221
Q ss_pred CCC-------CCCc-----eEeEEEEecCCCChhhhhccCCCccc-cccCCHHHHHHHHHHHHHHHHHHhhcCCCCceee
Q 040925 600 TDF-------KGTD-----FKAFVFEYMENGSLKDWLHQSDDQVE-VCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHG 666 (833)
Q Consensus 600 ~~~-------~~~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~-~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~ 666 (833)
... .+.. ..+++|+-+. +||.+++..-..... ........+..+..|+++.+++||+. |+||+
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHg 169 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHG 169 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEES
T ss_pred cCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEec
Confidence 110 0011 2367888885 599888653111000 11344555677779999999999999 99999
Q ss_pred CCCCCCeeecCCCcEEEcccccccccCcccccccccCCCccccccccccccCccccCC--------CCCCcccccccCCc
Q 040925 667 DLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMG--------SEASMTGDIFTGRR 738 (833)
Q Consensus 667 Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Di~s~~~ 738 (833)
||||+|++++.+|.++|+||+.....+..... ...+..|.+||.... ..++.+.|.|+
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~-----------~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~--- 235 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC-----------SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQ--- 235 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTEEEEG-----------GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHH---
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCceeec-----------cCCCcccCChhhhhhhcccCcccceeeeccCHHH---
Confidence 99999999999999999999988765543221 124577999996533 24788889888
Q ss_pred CCCccccCCccHHHHHHHhCCCcccc-cccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCC
Q 040925 739 PIDAVFNEGHSLHEFAKTALPEKVME-IVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFER 811 (833)
Q Consensus 739 ~~~~~~~~g~~l~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 811 (833)
.|+++|.+..+.+|+.... ..++... -.... +.++.+..+|..++++||.+|
T Consensus 236 -------LG~~ly~lWC~~lPf~~~~~~~~~~~~-------------f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 236 -------LGITLYSLWCGRLPFGLSSPEADPEWD-------------FSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp -------HHHHHHHHHHSS-STCCCGGGSTSGGG-------------GTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred -------HHHHHHHHHHccCCCCCCCcccccccc-------------chhcC-CcCHHHHHHHHHHccCCcccC
Confidence 8889999999999987332 2222210 01112 578889999999999999988
No 443
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.72 E-value=1.6e-17 Score=190.49 Aligned_cols=254 Identities=19% Similarity=0.185 Sum_probs=176.1
Q ss_pred HHHHHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcC---CCccceEeeEeecCC
Q 040925 525 ELSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIR---HRNLIKIITICSSTD 601 (833)
Q Consensus 525 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~ 601 (833)
+.+.....|.|.+.+|+|+||+||+|+... |+.||+|+-+.... -+|.-=.+++.+|+ -+.|+++...+...
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~---WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~- 766 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNP---WEFYICLQVMERLKPQMLPSIMHISSAHVFQ- 766 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCc---eeeeehHHHHHhhchhhhcchHHHHHHHccC-
Confidence 444455679999999999999999999985 99999999764432 22222334444554 23344444332222
Q ss_pred CCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecC----
Q 040925 602 FKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDH---- 677 (833)
Q Consensus 602 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~---- 677 (833)
+.-++|+||.+.|||.+++...+ .++|.-++.++.|+++-+++||.. +|||+||||+|.+|..
T Consensus 767 ----~~S~lv~ey~~~Gtlld~~N~~~------~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~ 833 (974)
T KOG1166|consen 767 ----NASVLVSEYSPYGTLLDLINTNK------VMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICA 833 (974)
T ss_pred ----CcceeeeeccccccHHHhhccCC------CCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCC
Confidence 25679999999999999999554 689999999999999999999999 9999999999999942
Q ss_pred ---CCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHH
Q 040925 678 ---DMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFA 754 (833)
Q Consensus 678 ---~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~ 754 (833)
...++|+|||.+..+.--. ......+.++|-.+-.+|+..|.++++.+|.|- ...+++-++
T Consensus 834 ~~~~~~l~lIDfG~siDm~lfp------~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfG----------lAa~~h~mL 897 (974)
T KOG1166|consen 834 DSDSKGLYLIDFGRSIDMKLFP------DGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFG----------LAATVHVML 897 (974)
T ss_pred CCcccceEEEecccceeeeEcC------CCcEEeeeeccccchhHHHhcCCCCchhhhhHH----------HHHHHHHHH
Confidence 3369999999997653311 112334567899999999999999999999654 455666666
Q ss_pred HHhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHhhh
Q 040925 755 KTALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLCHTRE 826 (833)
Q Consensus 755 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~~i~~ 826 (833)
.|.+-. ..+...+.-.. ..+|..-.+. +-++...+|+.|-..=|...++...++++..
T Consensus 898 FG~y~q----~~~g~~~~~~~-------~~~Ry~~~~~---W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~ 955 (974)
T KOG1166|consen 898 FGKYME----VKNGSSWMVKT-------NFPRYWKRDM---WNKFFDLLLNPDCDTLPNLQELRTELEEVLA 955 (974)
T ss_pred HHHHHH----hcCCcceeccc-------cchhhhhHHH---HHHHHHHHhCcCcccchhHHHHHHHHHHHHH
Confidence 666543 11111100000 0112222222 3455556666666667888888888887754
No 444
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.72 E-value=1.3e-17 Score=178.91 Aligned_cols=216 Identities=26% Similarity=0.384 Sum_probs=159.2
Q ss_pred HhhcCCCccceEeeEeecCCCCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCC
Q 040925 582 LRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQP 661 (833)
Q Consensus 582 l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~ 661 (833)
|+.+.|.|+.+++|.+.+.. ..++|.+||..|+|.|.+..... .+++.-...++++|+.||+|+|..
T Consensus 1 l~~l~h~n~~~f~g~~~~~~-----~~~~i~~~c~rGsl~D~i~~~~~-----~~d~~F~~s~~rdi~~Gl~ylh~s--- 67 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGP-----EMIVIWEYCSRGSLLDILSNEDI-----KLDYFFILSFIRDISKGLAYLHNS--- 67 (484)
T ss_pred CcccchhhhhhheeeEecCC-----ceEEEEeeecCccHHhHHhcccc-----CccHHHHHHHHHHHHHHHHHHhcC---
Confidence 46788999999999987764 88999999999999999987432 689999999999999999999998
Q ss_pred Cc-eeeCCCCCCeeecCCCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCC-------CCccccc
Q 040925 662 PM-VHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSE-------ASMTGDI 733 (833)
Q Consensus 662 ~i-vH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~~Di 733 (833)
+| .|+.+++.|.++|....+||+|||+......... ........-..-|.|||.+.+.. .+.++||
T Consensus 68 ~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~------~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdi 141 (484)
T KOG1023|consen 68 PIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAE------PEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDI 141 (484)
T ss_pred cceeeeeeccccceeeeeEEEEechhhhccccccccc------ccccchhHHHHhccCHHHhcccccccccccccccCCe
Confidence 55 9999999999999999999999999876643100 00111122456799999887642 3556777
Q ss_pred ccCCcCCCccccCCccHHHHHHHhCCCcccc-cccccchhhhccccchhhhhhhhc-hHHHHHHHHHHhhccCCCCCCCC
Q 040925 734 FTGRRPIDAVFNEGHSLHEFAKTALPEKVME-IVDPSLLMEVMTNNSMIQEDKRVK-TEECLNAIIRTGVLCSMESPFER 811 (833)
Q Consensus 734 ~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~R 811 (833)
|| +|++++|++....|+.... ..++......+.+.......+... ..+.++.+..++.+||..+|++|
T Consensus 142 Ys----------~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~r 211 (484)
T KOG1023|consen 142 YS----------FGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKR 211 (484)
T ss_pred eh----------HHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhC
Confidence 77 8899999999998887322 222211111111101100111111 11556679999999999999999
Q ss_pred CCHHHHHHHHHHhhh
Q 040925 812 MDMRDVVAKLCHTRE 826 (833)
Q Consensus 812 Pt~~eil~~L~~i~~ 826 (833)
|++++|...++.+..
T Consensus 212 Ps~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 212 PSIEQIRSKLLTINK 226 (484)
T ss_pred ccHHHHHhhhhhhcc
Confidence 999999998887765
No 445
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.72 E-value=5.3e-17 Score=162.53 Aligned_cols=134 Identities=22% Similarity=0.344 Sum_probs=110.3
Q ss_pred ceeccCcceEEEEEEECCCceEEEEEEeeccCCc--------chhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceE
Q 040925 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG--------ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFK 608 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 608 (833)
+.||+|++|.||+|.+ .+..|++|+....... ....+.+|++++..+.|+++.....++.... ..
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~-----~~ 74 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPE-----NF 74 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCC-----CC
Confidence 5799999999999988 5677999986533211 1245788999999999998876666654333 57
Q ss_pred eEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccc
Q 040925 609 AFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGL 688 (833)
Q Consensus 609 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 688 (833)
++||||++|++|.+++.... + .+..++.+++.+|.++|+. +++|||++|+||+++ ++.++++|||.
T Consensus 75 ~lv~e~~~G~~L~~~~~~~~---------~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~ 140 (211)
T PRK14879 75 IIVMEYIEGEPLKDLINSNG---------M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGL 140 (211)
T ss_pred EEEEEEeCCcCHHHHHHhcc---------H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCc
Confidence 89999999999999986432 2 7889999999999999999 999999999999999 78999999999
Q ss_pred ccc
Q 040925 689 AKF 691 (833)
Q Consensus 689 a~~ 691 (833)
+..
T Consensus 141 a~~ 143 (211)
T PRK14879 141 AEF 143 (211)
T ss_pred ccC
Confidence 864
No 446
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.71 E-value=6.2e-17 Score=159.80 Aligned_cols=144 Identities=24% Similarity=0.199 Sum_probs=111.5
Q ss_pred HHHHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCc----------------------chhHHHHHHHHHh
Q 040925 526 LSKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG----------------------ASRSFVAECEALR 583 (833)
Q Consensus 526 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~ 583 (833)
+.....-|.+.+.||+|++|.||+|... +|+.||||+++..... ....+..|..++.
T Consensus 10 ~~~~~~~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 10 LVKRGVVESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHcCchhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 3333334888899999999999999886 7999999987643210 0123677899999
Q ss_pred hcCCC--ccceEeeEeecCCCCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCC
Q 040925 584 NIRHR--NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQP 661 (833)
Q Consensus 584 ~l~h~--niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~ 661 (833)
.+.|+ .+++.++. ...++||||++|++|.++... .....++.+++.++.++|+.
T Consensus 89 ~l~~~~i~v~~~~~~---------~~~~lv~e~~~g~~L~~~~~~------------~~~~~~~~~i~~~l~~lh~~--- 144 (198)
T cd05144 89 ALYEEGFPVPKPIDW---------NRHAVVMEYIDGVELYRVRVL------------EDPEEVLDEILEEIVKAYKH--- 144 (198)
T ss_pred HHHHcCCCCCceeec---------CCceEEEEEeCCcchhhcccc------------ccHHHHHHHHHHHHHHHHHC---
Confidence 99877 44444432 145899999999998765431 23457889999999999999
Q ss_pred CceeeCCCCCCeeecCCCcEEEcccccccccCc
Q 040925 662 PMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSD 694 (833)
Q Consensus 662 ~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 694 (833)
||+||||||+||++++++.++|+|||.+.....
T Consensus 145 gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 145 GIIHGDLSEFNILVDDDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred CCCcCCCCcccEEEcCCCcEEEEECCccccCCC
Confidence 999999999999999999999999999975543
No 447
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.70 E-value=1.6e-16 Score=180.92 Aligned_cols=140 Identities=26% Similarity=0.339 Sum_probs=110.3
Q ss_pred HHHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeecc-CC-------cchhHHHHHHHHHhhcCCCccceEeeEee
Q 040925 527 SKATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLK-YK-------GASRSFVAECEALRNIRHRNLIKIITICS 598 (833)
Q Consensus 527 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~-~~-------~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 598 (833)
......|...+.||+|+||.||+|.+... .+++|+.... .. ...+.+.+|+++++.++|++++....++.
T Consensus 329 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~ 406 (535)
T PRK09605 329 EEVKRRKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDV 406 (535)
T ss_pred cccccccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEE
Confidence 33445567789999999999999988643 3444432211 11 11246889999999999999988776654
Q ss_pred cCCCCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCC
Q 040925 599 STDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHD 678 (833)
Q Consensus 599 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~ 678 (833)
... ..++||||+++++|.+++. ....++.|++++|.|||+. +++|||+||+||++ ++
T Consensus 407 ~~~-----~~~lv~E~~~g~~L~~~l~--------------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~ 463 (535)
T PRK09605 407 DPE-----EKTIVMEYIGGKDLKDVLE--------------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RD 463 (535)
T ss_pred eCC-----CCEEEEEecCCCcHHHHHH--------------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-EC
Confidence 433 5689999999999998774 2457899999999999999 99999999999999 67
Q ss_pred CcEEEcccccccc
Q 040925 679 MVAHVCDFGLAKF 691 (833)
Q Consensus 679 ~~~kL~DfG~a~~ 691 (833)
+.++|+|||+++.
T Consensus 464 ~~~~liDFGla~~ 476 (535)
T PRK09605 464 DRLYLIDFGLGKY 476 (535)
T ss_pred CcEEEEeCccccc
Confidence 8999999999975
No 448
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.69 E-value=1.7e-16 Score=157.25 Aligned_cols=130 Identities=25% Similarity=0.386 Sum_probs=103.0
Q ss_pred eeccCcceEEEEEEECCCceEEEEEEeeccCC-c-------chhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEe
Q 040925 538 MIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-G-------ASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 538 ~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 609 (833)
.||+|++|.||+|.+ ++..|++|+...... . ....+.+|++++..++|+++.....++...+ ..+
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~-----~~~ 73 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPD-----NKT 73 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC-----CCE
Confidence 479999999999986 567899998643211 1 1245778999999998876544443433222 468
Q ss_pred EEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccc
Q 040925 610 FVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLA 689 (833)
Q Consensus 610 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 689 (833)
+||||++|++|.+++.... . .++.+++.+|.++|+. +++|||++|+||+++ ++.++++|||++
T Consensus 74 lv~e~~~g~~l~~~~~~~~------~-------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a 136 (199)
T TIGR03724 74 IVMEYIEGKPLKDVIEEGN------D-------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLG 136 (199)
T ss_pred EEEEEECCccHHHHHhhcH------H-------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCC
Confidence 9999999999998875421 1 7899999999999999 999999999999999 889999999998
Q ss_pred cc
Q 040925 690 KF 691 (833)
Q Consensus 690 ~~ 691 (833)
..
T Consensus 137 ~~ 138 (199)
T TIGR03724 137 KY 138 (199)
T ss_pred cC
Confidence 74
No 449
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.68 E-value=5e-18 Score=181.28 Aligned_cols=225 Identities=20% Similarity=0.198 Sum_probs=175.6
Q ss_pred eccCcceEEEEEEE---CCCceEEEEEEeeccCCc--chhHHHHHHHHHhhcC-CCccceEeeEeecCCCCCCceEeEEE
Q 040925 539 IGQGSFGYVYKGTL---GEDEMIVAVKVINLKYKG--ASRSFVAECEALRNIR-HRNLIKIITICSSTDFKGTDFKAFVF 612 (833)
Q Consensus 539 lg~G~~g~Vy~~~~---~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~lv~ 612 (833)
+|.|+||.|+++.. .+.+..+|+|+.+..... .......|..++..++ ||.+|++...+.. ....++++
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt-----~~kl~l~l 76 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQT-----DGKLYLIL 76 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeecc-----ccchhHhh
Confidence 68999999997654 345777899988644321 1124566888888887 9999999877544 44889999
Q ss_pred EecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccccc
Q 040925 613 EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL 692 (833)
Q Consensus 613 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 692 (833)
+|..+|.+...+.... .+++.....+...++-|++++|+. +|+|||+|++||+++.+|.+|+.|||.++..
T Consensus 77 d~~rgg~lft~l~~~~------~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~ 147 (612)
T KOG0603|consen 77 DFLRGGDLFTRLSKEV------MFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEA 147 (612)
T ss_pred hhcccchhhhccccCC------chHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHh
Confidence 9999999999888765 678888889999999999999999 9999999999999999999999999999866
Q ss_pred CcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchh
Q 040925 693 SDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLM 772 (833)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~ 772 (833)
-.... .+||..|||||++. ....++|.|| +|+..++++++..|+.. ....
T Consensus 148 v~~~~------------~cgt~eymApEI~~--gh~~a~D~ws----------~gvl~felltg~~pf~~------~~~~ 197 (612)
T KOG0603|consen 148 VKEKI------------ACGTYEYRAPEIIN--GHLSAADWWS----------FGVLAFELLTGTLPFGG------DTMK 197 (612)
T ss_pred Hhhhh------------cccchhhhhhHhhh--ccCCcccchh----------hhhhHHHHhhCCCCCch------HHHH
Confidence 54322 16999999999987 4677889888 88899999999998764 1111
Q ss_pred hhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCH
Q 040925 773 EVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDM 814 (833)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 814 (833)
.... .....+.+......+++..+...+|..|--.
T Consensus 198 ~Il~-------~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 198 RILK-------AELEMPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred HHhh-------hccCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 1111 1122344556667788888999999999754
No 450
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.65 E-value=2.4e-17 Score=172.74 Aligned_cols=249 Identities=22% Similarity=0.225 Sum_probs=153.2
Q ss_pred CCccCceeccCcceEEEEEEECCC---ceEEEEEEeeccCCcchhHHHHHHHHHhhcC-CCccceEee-------EeecC
Q 040925 532 EFSSSNMIGQGSFGYVYKGTLGED---EMIVAVKVINLKYKGASRSFVAECEALRNIR-HRNLIKIIT-------ICSST 600 (833)
Q Consensus 532 ~y~~~~~lg~G~~g~Vy~~~~~~~---~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~-------~~~~~ 600 (833)
.+.+.+..+..+++.++...-..+ .+.++.|..+...........+++-.+.... |+..+. .+ .....
T Consensus 245 s~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~r~~~~l~~~~~~~~s~~-~d~~~s~~~~~~~~ 323 (516)
T KOG1033|consen 245 SSSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTFRQLGVLVDSSHSNRSIL-EDLRPSLFESSKRN 323 (516)
T ss_pred cccccccccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhhhhhhheeccccCCcccc-cCCCCchhhhcccc
Confidence 344555556666666655443322 2333333333222122233344444444443 443322 11 11111
Q ss_pred CCCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCc
Q 040925 601 DFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMV 680 (833)
Q Consensus 601 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 680 (833)
......+.|+.|++|...+|.+++...+.. +.-++.....++.|++.|+.| + +.+|||+||.||+...+..
T Consensus 324 ~v~~~~~lyI~Mn~c~~~tledWl~rr~~~---e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q 394 (516)
T KOG1033|consen 324 KVGKKVYLYIQMNLCEKETLEDWLRRRRTG---EERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQ 394 (516)
T ss_pred ccccccchhhhhhhhhhhhHHHHhhCCCcc---cccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchh
Confidence 111234688999999999999999865432 256788899999999999999 6 8999999999999999999
Q ss_pred EEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCC
Q 040925 681 AHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPE 760 (833)
Q Consensus 681 ~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~ 760 (833)
+||.|||+........ +........+..+||..||+||.+.+..|+.++|||+ .|.+++|+....-..
T Consensus 395 ~kIgDFgl~ts~~~~~--~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIya----------LGlil~EL~~~f~T~ 462 (516)
T KOG1033|consen 395 LKIGDFGLVTSQDKDE--TVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYA----------LGLILAELLIQFSTQ 462 (516)
T ss_pred hhhhhhhheeecccCC--cccchhhhhhhcccccccCCHHHHhhhhhhhhcchhh----------HHHHHHHHHHHhccH
Confidence 9999999998765543 1111223344578999999999999999999999999 555555554421110
Q ss_pred ----c-ccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHH
Q 040925 761 ----K-VMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDV 817 (833)
Q Consensus 761 ----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei 817 (833)
. ..++-|..+-.. ...++ +.-..++.+++.+.|.+||++.+.
T Consensus 463 ~er~~t~~d~r~g~ip~~--------------~~~d~-p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 463 FERIATLTDIRDGIIPPE--------------FLQDY-PEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred HHHHHhhhhhhcCCCChH--------------HhhcC-cHHHHHHHHhcCCCcccCchHHHH
Confidence 0 111111111000 00111 123478889999999999954443
No 451
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.63 E-value=1.1e-15 Score=149.81 Aligned_cols=137 Identities=23% Similarity=0.266 Sum_probs=99.5
Q ss_pred CceeccCcceEEEEEEECCCceEEEEEEeeccCCcc--hhH----------------------HHHHHHHHhhcCCC--c
Q 040925 536 SNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGA--SRS----------------------FVAECEALRNIRHR--N 589 (833)
Q Consensus 536 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--~~~----------------------~~~E~~~l~~l~h~--n 589 (833)
.+.||+|+||.||+|.+. +++.||||+++...... ... ...|.+.+.++.+. .
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 468999999999999987 78999999987432111 111 13566666666443 3
Q ss_pred cceEeeEeecCCCCCCceEeEEEEecCCCChhhh-hccCCCccccccCCHHHHHHHHHHHHHHHHHHhh-cCCCCceeeC
Q 040925 590 LIKIITICSSTDFKGTDFKAFVFEYMENGSLKDW-LHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHH-HCQPPMVHGD 667 (833)
Q Consensus 590 iv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~-~~~~~ivH~D 667 (833)
+.+.+++ ...++||||++++++... +... ... .++..++.+++.++.++|. . +|+|||
T Consensus 81 ~~~~~~~---------~~~~lv~e~~~g~~~~~~~l~~~-------~~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~D 140 (187)
T cd05119 81 VPKPIDL---------NRHVLVMEFIGGDGIPAPRLKDV-------RLL-EDPEELYDQILELMRKLYREA---GLVHGD 140 (187)
T ss_pred CCceEec---------CCCEEEEEEeCCCCccChhhhhh-------hhc-ccHHHHHHHHHHHHHHHhhcc---CcCcCC
Confidence 4444443 135899999998654321 1111 011 5678899999999999999 7 999999
Q ss_pred CCCCCeeecCCCcEEEcccccccccCc
Q 040925 668 LKPSNVLLDHDMVAHVCDFGLAKFLSD 694 (833)
Q Consensus 668 lkp~NIll~~~~~~kL~DfG~a~~~~~ 694 (833)
|||+||+++ ++.++++|||.+.....
T Consensus 141 l~p~Nili~-~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 141 LSEYNILVD-DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred CChhhEEEE-CCcEEEEECcccccccC
Confidence 999999999 89999999999975543
No 452
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.60 E-value=8.4e-15 Score=147.77 Aligned_cols=138 Identities=17% Similarity=0.131 Sum_probs=105.3
Q ss_pred ceec-cCcceEEEEEEECCCceEEEEEEeeccC-------------CcchhHHHHHHHHHhhcCCCcc--ceEeeEeecC
Q 040925 537 NMIG-QGSFGYVYKGTLGEDEMIVAVKVINLKY-------------KGASRSFVAECEALRNIRHRNL--IKIITICSST 600 (833)
Q Consensus 537 ~~lg-~G~~g~Vy~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~h~ni--v~~~~~~~~~ 600 (833)
..|| .|+.|+||.++.. +..+|||.+.... ......+.+|++++.+++|++| ++.+++....
T Consensus 37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4687 8899999999874 6779999885321 1123567889999999998775 6777764332
Q ss_pred CCCCCceEeEEEEecCC-CChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCC
Q 040925 601 DFKGTDFKAFVFEYMEN-GSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM 679 (833)
Q Consensus 601 ~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~ 679 (833)
. ......++||||++| .+|.+++... .++.. .+.+++.++.+||+. ||+||||||+|||++.++
T Consensus 115 ~-~~~~~~~lV~e~l~G~~~L~~~l~~~-------~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~ 179 (239)
T PRK01723 115 H-GLFYRADILIERIEGARDLVALLQEA-------PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDG 179 (239)
T ss_pred c-CcceeeeEEEEecCCCCCHHHHHhcC-------CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCC
Confidence 1 111123699999997 6999988643 34443 356899999999999 999999999999999999
Q ss_pred cEEEcccccccc
Q 040925 680 VAHVCDFGLAKF 691 (833)
Q Consensus 680 ~~kL~DfG~a~~ 691 (833)
.++|+|||.+..
T Consensus 180 ~v~LIDfg~~~~ 191 (239)
T PRK01723 180 KFWLIDFDRGEL 191 (239)
T ss_pred CEEEEECCCccc
Confidence 999999999874
No 453
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.59 E-value=1.2e-14 Score=137.33 Aligned_cols=135 Identities=21% Similarity=0.292 Sum_probs=111.2
Q ss_pred cCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCC--CccceEeeEeecCCCCCCceEeEEE
Q 040925 535 SSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRH--RNLIKIITICSSTDFKGTDFKAFVF 612 (833)
Q Consensus 535 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~~~~lv~ 612 (833)
+.+.||+|.++.||++...+ ..+++|.++.... ...+.+|+.+++.++| ..+++++++.... +..+++|
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~-----~~~~~v~ 72 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESD-----GWSYLLM 72 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCC-----CccEEEE
Confidence 45789999999999999853 6799999864432 4678999999999976 5889988875433 4789999
Q ss_pred EecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccc
Q 040925 613 EYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKF 691 (833)
Q Consensus 613 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 691 (833)
||++++.+..+ +......++.+++++++++|.....+++|+|++|+||++++.+.++++|||.+..
T Consensus 73 e~~~g~~~~~~-------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 73 EWIEGETLDEV-------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred EecCCeecccC-------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 99998777643 3456677899999999999986444799999999999999989999999999874
No 454
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.59 E-value=3.3e-16 Score=175.56 Aligned_cols=215 Identities=25% Similarity=0.286 Sum_probs=143.3
Q ss_pred cCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeE
Q 040925 531 GEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAF 610 (833)
Q Consensus 531 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 610 (833)
.+|..++.|..|+||.||.++++.+.+.+|+|+-+ +. .+ ++ ||..+-+ ..+.
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~kiNk-q~-----li------lR-----nilt~a~-----------npfv 134 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINK-QN-----LI------LR-----NILTFAG-----------NPFV 134 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhcccc-cc-----hh------hh-----ccccccC-----------Ccce
Confidence 57999999999999999999999999999995432 11 11 11 1222111 2223
Q ss_pred EEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccc
Q 040925 611 VFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAK 690 (833)
Q Consensus 611 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 690 (833)
| |+-...++..+ +++. +++.+++|+|+. ||+|||+||+|.+|..-|.+|+.|||+++
T Consensus 135 v------gDc~tllk~~g------~lPv--------dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk 191 (1205)
T KOG0606|consen 135 V------GDCATLLKNIG------PLPV--------DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSK 191 (1205)
T ss_pred e------chhhhhcccCC------CCcc--------hhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhh
Confidence 3 44455555433 2222 227899999999 99999999999999999999999999987
Q ss_pred ccCccccc-------ccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCCCccc
Q 040925 691 FLSDHQLD-------TAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVM 763 (833)
Q Consensus 691 ~~~~~~~~-------~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~ 763 (833)
........ ......-....++|||.|+|||++..+.|...+|+|+ .|.++|++..+.+|+.-.
T Consensus 192 ~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwa----------mGiIlyeFLVgcvpffGd 261 (1205)
T KOG0606|consen 192 KGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWA----------MGIILYEFLVGCVPFFGD 261 (1205)
T ss_pred hhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHH----------HHHHHHHHheeeeeccCC
Confidence 53211100 0000111223568999999999999999999999999 788888888888886521
Q ss_pred ccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCC
Q 040925 764 EIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERM 812 (833)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 812 (833)
. ..++...++......... .+..+.+..+++.+.++.+|..|-
T Consensus 262 t--peelfg~visd~i~wpE~----dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 262 T--PEELFGQVISDDIEWPEE----DEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred C--HHHHHhhhhhhhcccccc----CcCCCHHHHHHHHHHHHhChHhhc
Confidence 0 011222222222222222 223456678888999999999996
No 455
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.50 E-value=2.6e-15 Score=169.75 Aligned_cols=257 Identities=23% Similarity=0.262 Sum_probs=185.0
Q ss_pred hcCCccCceeccCcceEEEEEEEC-CCceEEEEEEeeccC--CcchhHHHHHHHHHhhcC-CCccceEeeEeecCCCCCC
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLG-EDEMIVAVKVINLKY--KGASRSFVAECEALRNIR-HRNLIKIITICSSTDFKGT 605 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~ 605 (833)
...|.+.+.||+|+++.|-.+... .....+|+|.+.... .........|..+-..+. |+|++++++.....+
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~---- 94 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPR---- 94 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCc----
Confidence 346888889999999999988774 345567777775432 223345556788877776 999999999855544
Q ss_pred ceEeEEEEecCCCChhhhh-ccCCCccccccCCHHHHHHHHHHHHHHHHHHh-hcCCCCceeeCCCCCCeeecCCC-cEE
Q 040925 606 DFKAFVFEYMENGSLKDWL-HQSDDQVEVCKLSLIQRVNIAIDVASAMEYLH-HHCQPPMVHGDLKPSNVLLDHDM-VAH 682 (833)
Q Consensus 606 ~~~~lv~e~~~~gsL~~~l-~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH-~~~~~~ivH~Dlkp~NIll~~~~-~~k 682 (833)
..+++++|..+|++.+.+ ..... ..+...+..+..|+..|+.|+| .. ++.|||+||+|.+++..+ ..|
T Consensus 95 -~~~~~~~~s~g~~~f~~i~~~~~~-----~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~ 165 (601)
T KOG0590|consen 95 -SYLLSLSYSDGGSLFSKISHPDST-----GTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALK 165 (601)
T ss_pred -ccccccCcccccccccccccCCcc-----CCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCccc
Confidence 889999999999999988 33221 4566778889999999999999 77 999999999999999999 999
Q ss_pred EcccccccccCc-ccccccccCCCccccccc-cccccCccccCCC-CCCcccccccCCcCCCccccCCccHHHHHHHhCC
Q 040925 683 VCDFGLAKFLSD-HQLDTAVKTPSSSIGLKG-TVGYVAPEYGMGS-EASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALP 759 (833)
Q Consensus 683 L~DfG~a~~~~~-~~~~~~~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p 759 (833)
++|||+|..+.. ... .......+| ++.|+|||...+. -.....|+|| .|+++..+.++..|
T Consensus 166 ~~df~~At~~~~~~g~------~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S----------~g~~l~~~~~g~~p 229 (601)
T KOG0590|consen 166 IADFGLATAYRNKNGA------ERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWS----------LGIVLSAMLTGELP 229 (601)
T ss_pred CCCchhhccccccCCc------ceeeecccCCCCCCCCcccccchhhcCCCccccc----------ccccccccccCCCC
Confidence 999999987655 221 122234567 9999999998874 4567789998 66667777777777
Q ss_pred CcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 760 EKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 760 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
+......+..... ++... ................+++.+++..+|+.|.+.+++..
T Consensus 230 ~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 230 WDFPSRKDGRYSS-WKSNK---GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred cccccccccccee-ecccc---cccccCccccCChhhhhcccccccCCchhccccccccc
Confidence 7644433322111 11111 00001112334456678888999999999999988754
No 456
>PLN03150 hypothetical protein; Provisional
Probab=99.48 E-value=1.2e-13 Score=158.97 Aligned_cols=118 Identities=32% Similarity=0.538 Sum_probs=102.0
Q ss_pred CcCEEeccCCcCCCCCCccccCCCCCcEEeecCCccccccCccccCCCCCCeEEccCcccCCCchhhhcCCCCCceEECc
Q 040925 345 NLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNVSSNNLSGQIPEFLKNLSVLEFLSLS 424 (833)
Q Consensus 345 ~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~ 424 (833)
.++.|+|++|.+++.+|..+..+++|+.|+|++|++++.+|..+..+++|+.|+|++|++++.+|..+.++++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 37889999999999999999999999999999999999999899999999999999999999999999999999999999
Q ss_pred cCcCccccCCC--CccCCCccccccCCcCCCCCcccCCCCCCC
Q 040925 425 YNHFEGEVPTK--GVFSNKTKISLQGNMKLCGGIDELHLPSCP 465 (833)
Q Consensus 425 ~N~l~~~~~~~--~~~~~~~~l~l~~N~~~c~~~~~~~~~~~~ 465 (833)
+|++++..|.. ..+..+..+++.+|+.+|+.+. .+.|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~---l~~C~ 538 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPG---LRACG 538 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCC---CCCCc
Confidence 99999888864 2234556788999999998643 35664
No 457
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.46 E-value=1.9e-15 Score=158.44 Aligned_cols=178 Identities=30% Similarity=0.481 Sum_probs=110.9
Q ss_pred CCCeEeccCCcccccCCccccCCCCCCEEEcccccCcccCCccccCCCCCCeEEeecccccCCCCCCCCCCCccceeecC
Q 040925 224 NLIGFGAEENQLHGTIPDAIGELKNLQKLCLFRNFLQGRIPSGLGNLTKLANLELSSNSLQGNIPSSLGNCQNLMSFTAS 303 (833)
Q Consensus 224 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 303 (833)
--...+|+.|++. .+|..+..+..|+.|.|.+|.|. .+|..++++..|++|||+.|+++ ..|..++.|+ |+.|-++
T Consensus 76 dt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~s 151 (722)
T KOG0532|consen 76 DTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVS 151 (722)
T ss_pred chhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEe
Confidence 3445566666666 55666666666666666666666 56666666666666666666666 5555566555 6666666
Q ss_pred CceecccCCcccccccccceeeecCCCccCCCCCcccccCCCcCEEeccCCcCCCCCCccccCCCCCcEEeecCCccccc
Q 040925 304 QNKLTGALPHQLLSITTLSLYLDLSNNLLNGSLPLQVGHLKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFHGV 383 (833)
Q Consensus 304 ~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 383 (833)
+|+++ .+|+.+....++ ..||.+.|.+. .+|..++++.+|+.|.+..|++. ..|..+..| .|..||+|.|++. .
T Consensus 152 NNkl~-~lp~~ig~~~tl-~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis-~ 225 (722)
T KOG0532|consen 152 NNKLT-SLPEEIGLLPTL-AHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS-Y 225 (722)
T ss_pred cCccc-cCCcccccchhH-HHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee-e
Confidence 66666 566666644444 45666666666 55666666666777777777666 334445533 3666677777766 5
Q ss_pred cCccccCCCCCCeEEccCcccCCCchhhh
Q 040925 384 IPLSLSFLKSIKELNVSSNNLSGQIPEFL 412 (833)
Q Consensus 384 ~~~~~~~l~~L~~L~l~~N~l~~~~p~~l 412 (833)
+|..|..|+.|++|-|.+|.+. .+|..+
T Consensus 226 iPv~fr~m~~Lq~l~LenNPLq-SPPAqI 253 (722)
T KOG0532|consen 226 LPVDFRKMRHLQVLQLENNPLQ-SPPAQI 253 (722)
T ss_pred cchhhhhhhhheeeeeccCCCC-CChHHH
Confidence 5666666777777777777766 444443
No 458
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.46 E-value=7.1e-15 Score=154.15 Aligned_cols=182 Identities=31% Similarity=0.501 Sum_probs=121.2
Q ss_pred CCCCCCEEEccCCcCcccCChhHhhhcccccEEEccCccccccCChhhhcCCCCCeEeccCCcccccCCccccCCCCCCE
Q 040925 172 NCSSLKALSLADNQFGGELPHSIANLSSTVINFGIGRNQISGTIPPGIRNLVNLIGFGAEENQLHGTIPDAIGELKNLQK 251 (833)
Q Consensus 172 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 251 (833)
.++.-...||+.|++. ++|..++.+.. +..+.+..|.|. .+|..++++..|++|+|+.|+++ ..|..++.|+ |+.
T Consensus 73 ~ltdt~~aDlsrNR~~-elp~~~~~f~~-Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkv 147 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFS-ELPEEACAFVS-LESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKV 147 (722)
T ss_pred cccchhhhhccccccc-cCchHHHHHHH-HHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-cee
Confidence 3444455666777766 56655555443 344455555555 66667777777777777777777 5666666554 777
Q ss_pred EEcccccCcccCCccccCCCCCCeEEeecccccCCCCCCCCCCCccceeecCCceecccCCcccccccccceeeecCCCc
Q 040925 252 LCLFRNFLQGRIPSGLGNLTKLANLELSSNSLQGNIPSSLGNCQNLMSFTASQNKLTGALPHQLLSITTLSLYLDLSNNL 331 (833)
Q Consensus 252 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~ll~~L~ls~N~ 331 (833)
|-+++|+++ .+|+.++.+..|..||.+.|.|. .+|..++++.+|+.|.+..|++. .+|+.++.++ + ..||+|.|+
T Consensus 148 li~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~Lp-L-i~lDfScNk 222 (722)
T KOG0532|consen 148 LIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSLP-L-IRLDFSCNK 222 (722)
T ss_pred EEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCCc-e-eeeecccCc
Confidence 777777777 56666777777777777777777 56666777777777777777777 6777666333 3 457777777
Q ss_pred cCCCCCcccccCCCcCEEeccCCcCCCCCCcccc
Q 040925 332 LNGSLPLQVGHLKNLVILDISSNQFSGVIPGTLS 365 (833)
Q Consensus 332 l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~ 365 (833)
++ .+|..|.+++.|++|-|.+|.++ .+|..++
T Consensus 223 is-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC 254 (722)
T KOG0532|consen 223 IS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQIC 254 (722)
T ss_pred ee-ecchhhhhhhhheeeeeccCCCC-CChHHHH
Confidence 76 66777777777777777777776 4555444
No 459
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.45 E-value=1.2e-13 Score=152.35 Aligned_cols=195 Identities=35% Similarity=0.504 Sum_probs=112.0
Q ss_pred EEECCCcccccccCchhhcCCCCccEEEccCCcceeeCCccccCCC-CCcEEEcccCccccccCcCccCCCcCceEeccc
Q 040925 75 LIQLALNRFSGNLPFDIVVNLPNLKALAIGGNNFFGSIPYSLSNAS-NLELLDLSVNQFKGNVSIDFSSLKNLLWLNLEQ 153 (833)
Q Consensus 75 ~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 153 (833)
.|+++.|++...+. . ...++.++.|++.+|.++ .++.....+. +|+.|++++|+|..++ ..+..+++|+.|++++
T Consensus 97 ~l~~~~~~~~~~~~-~-~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~~l~-~~~~~l~~L~~L~l~~ 172 (394)
T COG4886 97 SLDLNLNRLRSNIS-E-LLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIESLP-SPLRNLPNLKNLDLSF 172 (394)
T ss_pred eeeccccccccCch-h-hhcccceeEEecCCcccc-cCccccccchhhcccccccccchhhhh-hhhhccccccccccCC
Confidence 57777777631222 2 235577888888888887 4444555553 7888888888887543 4567788888888888
Q ss_pred ccCCCCCCCCcccccccCCCCCCCEEEccCCcCcccCChhHhhhcccccEEEccCccccccCChhhhcCCCCCeEeccCC
Q 040925 154 NNLGTGTATDLDFVTFLTNCSSLKALSLADNQFGGELPHSIANLSSTVINFGIGRNQISGTIPPGIRNLVNLIGFGAEEN 233 (833)
Q Consensus 154 N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N 233 (833)
|+++.++.. ...+++|+.|++++|+++ .+|..+. ....+.++.+++|.+. ..+..+.++.++..|.+.+|
T Consensus 173 N~l~~l~~~-------~~~~~~L~~L~ls~N~i~-~l~~~~~-~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n 242 (394)
T COG4886 173 NDLSDLPKL-------LSNLSNLNNLDLSGNKIS-DLPPEIE-LLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNN 242 (394)
T ss_pred chhhhhhhh-------hhhhhhhhheeccCCccc-cCchhhh-hhhhhhhhhhcCCcce-ecchhhhhcccccccccCCc
Confidence 888766542 236778888888888887 4554431 1122334444444322 33444445555555555555
Q ss_pred cccccCCccccCCCCCCEEEcccccCcccCCccccCCCCCCeEEeecccccCC
Q 040925 234 QLHGTIPDAIGELKNLQKLCLFRNFLQGRIPSGLGNLTKLANLELSSNSLQGN 286 (833)
Q Consensus 234 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 286 (833)
++. ..+..++.++++++|++++|.++.+.+ ++.+.+++.|++++|.+...
T Consensus 243 ~~~-~~~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~ 292 (394)
T COG4886 243 KLE-DLPESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNA 292 (394)
T ss_pred eee-eccchhccccccceecccccccccccc--ccccCccCEEeccCcccccc
Confidence 544 224444444555555555555542211 44455555555555554433
No 460
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.45 E-value=3.3e-13 Score=148.21 Aligned_cols=143 Identities=20% Similarity=0.260 Sum_probs=101.0
Q ss_pred CceeccCcceEEEEEEECCCceEEEEEEeeccCCcch----------------------------------------hHH
Q 040925 536 SNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGAS----------------------------------------RSF 575 (833)
Q Consensus 536 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~----------------------------------------~~~ 575 (833)
.+.||+|++|+||+|+.+ +|+.||||+.++...... -++
T Consensus 122 ~~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred CcceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 367999999999999987 789999999864321000 024
Q ss_pred HHHHHHHhhcC----CCccceEeeEeecCCCCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHH-
Q 040925 576 VAECEALRNIR----HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVAS- 650 (833)
Q Consensus 576 ~~E~~~l~~l~----h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~- 650 (833)
.+|++.+.+++ |..-+.+-.++.+. ....++||||++|++|.++...... .. ....++.+++.
T Consensus 201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~----~~~~vLvmE~i~G~~L~~~~~~~~~-----~~---~~~~ia~~~~~~ 268 (437)
T TIGR01982 201 RREAANASELGENFKNDPGVYVPEVYWDR----TSERVLTMEWIDGIPLSDIAALDEA-----GL---DRKALAENLARS 268 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCEEeCCEehhh----cCCceEEEEeECCcccccHHHHHhc-----CC---CHHHHHHHHHHH
Confidence 55666666652 32223333333221 2346899999999999887653211 12 23456666666
Q ss_pred HHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccCc
Q 040925 651 AMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSD 694 (833)
Q Consensus 651 gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 694 (833)
.+..+|.. |++|+|+||.||+++.++.++++|||++..++.
T Consensus 269 ~l~ql~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 269 FLNQVLRD---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred HHHHHHhC---CceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 47888988 999999999999999999999999999987654
No 461
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.45 E-value=1.4e-13 Score=151.74 Aligned_cols=243 Identities=33% Similarity=0.422 Sum_probs=161.5
Q ss_pred CCEEEcCCCcccccCCccccCCCCCcEEECCCcccccccCchhhcCCCCc---cEEEccCCcceeeCCccccCCCCCcEE
Q 040925 49 LVSLNVAENKFSGMFPRSICNISSLELIQLALNRFSGNLPFDIVVNLPNL---KALAIGGNNFFGSIPYSLSNASNLELL 125 (833)
Q Consensus 49 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L---~~L~L~~N~l~~~~~~~~~~l~~L~~L 125 (833)
-..+.+.++... ..+..+.....+....-+.+... +....+.++ ..|++..|++. ........++.++.|
T Consensus 49 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l-----~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~l~~L 121 (394)
T COG4886 49 RLALNLSSNTLL-LLPSSLSRLLSLDLLSPSGISSL-----DGSENLLNLLPLPSLDLNLNRLR-SNISELLELTNLTSL 121 (394)
T ss_pred hhcccCCcchhh-hhhcchhhhhhhcccCcCCcccc-----cccccccCCCCCceeeccccccc-cCchhhhcccceeEE
Confidence 344555555554 55555655555554444322211 111223333 47999999985 334456677899999
Q ss_pred EcccCccccccCcCccCCC-cCceEecccccCCCCCCCCcccccccCCCCCCCEEEccCCcCcccCChhHhhhcccccEE
Q 040925 126 DLSVNQFKGNVSIDFSSLK-NLLWLNLEQNNLGTGTATDLDFVTFLTNCSSLKALSLADNQFGGELPHSIANLSSTVINF 204 (833)
Q Consensus 126 ~L~~N~i~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~l~~L 204 (833)
++.+|+++.+++ ....++ +|+.|++++|.+..++ ..+..+++|+.|++++|+++ .+|...+.. ..+..|
T Consensus 122 ~l~~n~i~~i~~-~~~~~~~nL~~L~l~~N~i~~l~-------~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~-~~L~~L 191 (394)
T COG4886 122 DLDNNNITDIPP-LIGLLKSNLKELDLSDNKIESLP-------SPLRNLPNLKNLDLSFNDLS-DLPKLLSNL-SNLNNL 191 (394)
T ss_pred ecCCcccccCcc-ccccchhhcccccccccchhhhh-------hhhhccccccccccCCchhh-hhhhhhhhh-hhhhhe
Confidence 999999997765 344553 9999999999998764 23678999999999999999 666554433 236667
Q ss_pred EccCccccccCChhhhcCCCCCeEeccCCcccccCCccccCCCCCCEEEcccccCcccCCccccCCCCCCeEEeeccccc
Q 040925 205 GIGRNQISGTIPPGIRNLVNLIGFGAEENQLHGTIPDAIGELKNLQKLCLFRNFLQGRIPSGLGNLTKLANLELSSNSLQ 284 (833)
Q Consensus 205 ~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 284 (833)
++++|++. .+|.....+.+|++|++++|.+. ..+..+..+.++..|.+.+|++. ..+..+..++++++|++++|+++
T Consensus 192 ~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~ 268 (394)
T COG4886 192 DLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQIS 268 (394)
T ss_pred eccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccchhccccccceecccccccc
Confidence 77777777 45555555566777777777544 35566677777777777777776 33566667777777777777776
Q ss_pred CCCCCCCCCCCccceeecCCceecccCCc
Q 040925 285 GNIPSSLGNCQNLMSFTASQNKLTGALPH 313 (833)
Q Consensus 285 ~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 313 (833)
...+ ++.+.+++.|++++|.+....|.
T Consensus 269 ~i~~--~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 269 SISS--LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred cccc--ccccCccCEEeccCccccccchh
Confidence 4333 66777777777777777644443
No 462
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.41 E-value=6.5e-13 Score=147.06 Aligned_cols=150 Identities=17% Similarity=0.190 Sum_probs=100.1
Q ss_pred HhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCc----------------------------------chh-
Q 040925 529 ATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKG----------------------------------ASR- 573 (833)
Q Consensus 529 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----------------------------------~~~- 573 (833)
....|+. +.||+|++|+||+|+.+++|+.||||+.++.-.. ..+
T Consensus 118 ~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~ 196 (537)
T PRK04750 118 WFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKT 196 (537)
T ss_pred HHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHH
Confidence 3446776 7999999999999999877999999999744110 001
Q ss_pred -----HHHHHHHHHhhcC----CCccceEeeEeecCCCCCCceEeEEEEecCCCChhhhh--ccCCCccccccCCHHHHH
Q 040925 574 -----SFVAECEALRNIR----HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWL--HQSDDQVEVCKLSLIQRV 642 (833)
Q Consensus 574 -----~~~~E~~~l~~l~----h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l--~~~~~~~~~~~l~~~~~~ 642 (833)
++.+|+..+.+++ +...+.+-.++.+ -....++||||++|+.+.++- ...+. ....+....+.
T Consensus 197 l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d----~st~~VLvmE~i~G~~l~d~~~l~~~g~--d~~~la~~~v~ 270 (537)
T PRK04750 197 LHDELDLMREAANASQLRRNFEDSDMLYVPEVYWD----YCSETVMVMERMYGIPVSDVAALRAAGT--DMKLLAERGVE 270 (537)
T ss_pred HHHhhCHHHHHHHHHHHHHHccCCCCeecceeecc----cCCCceEEEeeecCccHHhHHHHHhcCC--CHHHHHHHHHH
Confidence 2445555555552 3333333333322 123568999999999998752 22211 11123344444
Q ss_pred HHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCC----cEEEcccccccccCcc
Q 040925 643 NIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM----VAHVCDFGLAKFLSDH 695 (833)
Q Consensus 643 ~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kL~DfG~a~~~~~~ 695 (833)
.++.|+. .. |++|+|+||.||+++.++ +++++|||++..++..
T Consensus 271 ~~~~Qif-------~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~ 317 (537)
T PRK04750 271 VFFTQVF-------RD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE 317 (537)
T ss_pred HHHHHHH-------hC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence 4555543 45 999999999999999988 9999999999877553
No 463
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.36 E-value=9.2e-13 Score=129.52 Aligned_cols=214 Identities=21% Similarity=0.298 Sum_probs=143.3
Q ss_pred HHHHhhcCCCccceEeeEeecCCCCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhc
Q 040925 579 CEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHH 658 (833)
Q Consensus 579 ~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~ 658 (833)
..-+-++-|.|+|+++.|+.+..+++.....++.|||+.|++.+++++...... .+......+|+-||+.||.|||+.
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~--a~~~~~wkkw~tqIlsal~yLhs~ 195 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQK--ALFQKAWKKWCTQILSALSYLHSC 195 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhh--hhhHHHHHHHHHHHHhhhhhhhcc
Confidence 344556679999999999988877777788999999999999999987654322 577788889999999999999997
Q ss_pred CCCCceeeCCCCCCeeecCCCcEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCc
Q 040925 659 CQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRR 738 (833)
Q Consensus 659 ~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~ 738 (833)
.|+|+|+++..+-|++..+|-+|+.--.-........ .. . ......-.+-++|.|||.-.....+.++|||+
T Consensus 196 -~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~-~~--~-~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~--- 267 (458)
T KOG1266|consen 196 -DPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVN-ST--R-EAEKSVNTSLPGFSAPESGTTTNTTGASDIYK--- 267 (458)
T ss_pred -CCccccCCcchhheeecCCceEEecccCccccchhhh-hh--h-HhhhhccccCCccccCCcCcccccccchhhhh---
Confidence 7899999999999999999988875221111100000 00 0 00011123678999999866666778899888
Q ss_pred CCCccccCCccHHHHHHHhCCCc-ccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHH
Q 040925 739 PIDAVFNEGHSLHEFAKTALPEK-VMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDV 817 (833)
Q Consensus 739 ~~~~~~~~g~~l~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei 817 (833)
+|+...++..+..-.. -...+.++.. +.+..... + ...=..++..|++..|..||+|+++
T Consensus 268 -------fgmcAlemailEiq~tnseS~~~~ee~---ia~~i~~l-------e--n~lqr~~i~kcl~~eP~~rp~ar~l 328 (458)
T KOG1266|consen 268 -------FGMCALEMAILEIQSTNSESKVEVEEN---IANVIIGL-------E--NGLQRGSITKCLEGEPNGRPDARLL 328 (458)
T ss_pred -------hhHHHHHHHHheeccCCCcceeehhhh---hhhheeec-------c--CccccCcCcccccCCCCCCcchhhh
Confidence 6666666666655322 1111111110 00000000 0 0011356788999999999999998
Q ss_pred HHHH
Q 040925 818 VAKL 821 (833)
Q Consensus 818 l~~L 821 (833)
+.+.
T Consensus 329 lfHp 332 (458)
T KOG1266|consen 329 LFHP 332 (458)
T ss_pred hcCc
Confidence 7653
No 464
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.33 E-value=1.8e-11 Score=117.46 Aligned_cols=139 Identities=19% Similarity=0.216 Sum_probs=100.6
Q ss_pred CceeccCcceEEEEEEECC------CceEEEEEEeeccC------------C----------cchhHH----HHHHHHHh
Q 040925 536 SNMIGQGSFGYVYKGTLGE------DEMIVAVKVINLKY------------K----------GASRSF----VAECEALR 583 (833)
Q Consensus 536 ~~~lg~G~~g~Vy~~~~~~------~~~~vavK~~~~~~------------~----------~~~~~~----~~E~~~l~ 583 (833)
...||.|--+.||.|...+ .+..+|||+.+... + ...+.+ .+|++.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3578999999999998653 35789999886321 0 001122 38999999
Q ss_pred hcC--CCccceEeeEeecCCCCCCceEeEEEEecCCCChhh-hhccCCCccccccCCHHHHHHHHHHHHHHHHHH-hhcC
Q 040925 584 NIR--HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKD-WLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYL-HHHC 659 (833)
Q Consensus 584 ~l~--h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~L-H~~~ 659 (833)
++. .-++.+.+++ ...++||||+.+..+.. .++.. .++..+...+..+++.+|..+ |..
T Consensus 82 rl~~~Gv~vP~pi~~---------~~~~lvME~Ig~~~~~~~~Lkd~-------~~~~~~~~~i~~~i~~~l~~l~H~~- 144 (197)
T cd05146 82 RMQKAGIPCPEVVVL---------KKHVLVMSFIGDDQVPAPKLKDA-------KLNDEEMKNAYYQVLSMMKQLYKEC- 144 (197)
T ss_pred HHHHcCCCCCeEEEe---------cCCEEEEEEcCCCCccchhhhcc-------ccCHHHHHHHHHHHHHHHHHHHHhC-
Confidence 995 3566677764 14579999997643321 22211 344556677889999999999 788
Q ss_pred CCCceeeCCCCCCeeecCCCcEEEcccccccccCc
Q 040925 660 QPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSD 694 (833)
Q Consensus 660 ~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 694 (833)
|+||+|+++.||+++ ++.++++|||.|.....
T Consensus 145 --glVHGDLs~~NIL~~-~~~v~iIDF~qav~~~h 176 (197)
T cd05146 145 --NLVHADLSEYNMLWH-DGKVWFIDVSQSVEPTH 176 (197)
T ss_pred --CeecCCCCHHHEEEE-CCcEEEEECCCceeCCC
Confidence 999999999999996 56899999999876544
No 465
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.32 E-value=2e-12 Score=139.14 Aligned_cols=247 Identities=25% Similarity=0.268 Sum_probs=175.1
Q ss_pred CCccCceecc--CcceEEEEEEE--CCCceEEEEEEeeccCC--cchhHHHHHHHHHhhcC-CCccceEeeEeecCCCCC
Q 040925 532 EFSSSNMIGQ--GSFGYVYKGTL--GEDEMIVAVKVINLKYK--GASRSFVAECEALRNIR-HRNLIKIITICSSTDFKG 604 (833)
Q Consensus 532 ~y~~~~~lg~--G~~g~Vy~~~~--~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 604 (833)
.|.+.+.+|. |.+|.||.+.. ..++..+|+|.-+.... .....-.+|+...+.++ |++.++.+.. +++
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~-----~e~ 189 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPA-----WEG 189 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcc-----ccc
Confidence 4667789999 99999999998 88899999998543322 33344466777777775 9999996665 455
Q ss_pred CceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHH----HHHHHhhcCCCCceeeCCCCCCeeecCC-C
Q 040925 605 TDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVAS----AMEYLHHHCQPPMVHGDLKPSNVLLDHD-M 679 (833)
Q Consensus 605 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~----gL~~LH~~~~~~ivH~Dlkp~NIll~~~-~ 679 (833)
.+..++-+|++. .++.++...... .++....+.+..+... |+.++|+. +++|-|+||+||+...+ .
T Consensus 190 ~~~lfiqtE~~~-~sl~~~~~~~~~-----~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~ 260 (524)
T KOG0601|consen 190 SGILFIQTELCG-ESLQSYCHTPCN-----FLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWT 260 (524)
T ss_pred CCcceeeecccc-chhHHhhhcccc-----cCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccc
Confidence 568889999995 689988876542 3778888888888888 99999999 99999999999999999 8
Q ss_pred cEEEcccccccccCcccccccccCCCccccccccccccCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhCC
Q 040925 680 VAHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALP 759 (833)
Q Consensus 680 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p 759 (833)
..+++|||+...+.+........ ......|...|++||...+ -++.++|||+ .|.++.+...+...
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~---~~~r~~~~~~Y~~ke~~~~-l~~~~~di~s----------l~ev~l~~~l~~~~ 326 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFK---VSKRPEGDCIYAAKELLNG-LATFASDIFS----------LGEVILEAILGSHL 326 (524)
T ss_pred eeecCCcceeEEccCCcccccee---eeecCCCCceEeChhhhcc-ccchHhhhcc----------hhhhhHhhHhhccc
Confidence 89999999999887765432221 1123358889999997655 5788899888 55555555444433
Q ss_pred Cccc-----ccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHH
Q 040925 760 EKVM-----EIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVA 819 (833)
Q Consensus 760 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~ 819 (833)
.... ...+.... .....+....++...+..++..+|..|++++.+..
T Consensus 327 ~~~g~~~~W~~~r~~~i-------------p~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 327 PSVGKNSSWSQLRQGYI-------------PLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred ccCCCCCCccccccccC-------------chhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 2211 11111110 00001111223344778899999999999887754
No 466
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.29 E-value=2.1e-12 Score=121.27 Aligned_cols=127 Identities=24% Similarity=0.335 Sum_probs=40.8
Q ss_pred ccCCCCCCEEEccCCcccccCCccCC-CCCCCCEEEcCCCcccccCCccccCCCCCcEEECCCcccccccCchhhcCCCC
Q 040925 19 VGNLSDLEVIRIMGNSLGGKIPTTLG-LLRNLVSLNVAENKFSGMFPRSICNISSLELIQLALNRFSGNLPFDIVVNLPN 97 (833)
Q Consensus 19 ~~~l~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~ 97 (833)
+.+...++.|+|++|.|+.+ . .++ .+.+|+.|+|++|.|+.+ +.+..+++|++|++++|+|+ .++..+...+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~I-e-~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQISTI-E-NLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRIS-SISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS----S-CHHHHHH-TT
T ss_pred cccccccccccccccccccc-c-chhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCC-ccccchHHhCCc
Confidence 44444677777777777432 2 355 467777777777777743 24677777777777777776 555444445777
Q ss_pred ccEEEccCCcceeeCC-ccccCCCCCcEEEcccCccccccC---cCccCCCcCceEe
Q 040925 98 LKALAIGGNNFFGSIP-YSLSNASNLELLDLSVNQFKGNVS---IDFSSLKNLLWLN 150 (833)
Q Consensus 98 L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~i~~~~~---~~~~~l~~L~~L~ 150 (833)
|++|+|++|+|..... ..++.+++|++|+|.+|.++.... ..+..+++|+.||
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD 146 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLD 146 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEET
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeC
Confidence 7777777777764221 345667777777777777763321 1234455555554
No 467
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.29 E-value=2e-11 Score=117.55 Aligned_cols=131 Identities=18% Similarity=0.162 Sum_probs=96.3
Q ss_pred CceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCcc-ceEeeEeecCCCCCCceEeEEEEe
Q 040925 536 SNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNL-IKIITICSSTDFKGTDFKAFVFEY 614 (833)
Q Consensus 536 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~~~lv~e~ 614 (833)
++.++.|.++.||+++.. +..|++|....... ....+.+|+.+++.+.+.++ .+++++.. . ..++||||
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~-----~~~lv~e~ 72 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP--E-----TGVLITEF 72 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC--C-----CCeEEEEe
Confidence 467899999999999874 77899999754322 23356889999999865444 45554421 1 24799999
Q ss_pred cCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcC--CCCceeeCCCCCCeeecCCCcEEEcccccccc
Q 040925 615 MENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHC--QPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKF 691 (833)
Q Consensus 615 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~--~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 691 (833)
++|.++.+. . . ....++.+++++++.||+.. ..+++|+|++|.||+++ ++.++++|||.+..
T Consensus 73 i~G~~l~~~----~------~----~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 73 IEGSELLTE----D------F----SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cCCCccccc----c------c----cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 999887643 0 0 11235678999999999982 11259999999999998 67899999999864
No 468
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.29 E-value=1.1e-12 Score=123.06 Aligned_cols=130 Identities=28% Similarity=0.289 Sum_probs=44.7
Q ss_pred CCCCCCCCEEEcCCCcccccCCcccc-CCCCCcEEECCCcccccccCchhhcCCCCccEEEccCCcceeeCCccc-cCCC
Q 040925 43 LGLLRNLVSLNVAENKFSGMFPRSIC-NISSLELIQLALNRFSGNLPFDIVVNLPNLKALAIGGNNFFGSIPYSL-SNAS 120 (833)
Q Consensus 43 ~~~l~~L~~L~L~~n~i~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~ 120 (833)
+.+..++++|+|++|.|+.+ +.++ .+.+|+.|+|++|.|+ .++. +..+++|++|+|++|+|+.+ +..+ ..++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~-~l~~--l~~L~~L~~L~L~~N~I~~i-~~~l~~~lp 88 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQIT-KLEG--LPGLPRLKTLDLSNNRISSI-SEGLDKNLP 88 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---TT------TT--EEE--SS---S--CHHHHHH-T
T ss_pred cccccccccccccccccccc--cchhhhhcCCCEEECCCCCCc-cccC--ccChhhhhhcccCCCCCCcc-ccchHHhCC
Confidence 44455678888888888743 2454 5778888888888887 5542 56677888888888888743 3333 3577
Q ss_pred CCcEEEcccCccccccC-cCccCCCcCceEecccccCCCCCCCCcccccccCCCCCCCEEEc
Q 040925 121 NLELLDLSVNQFKGNVS-IDFSSLKNLLWLNLEQNNLGTGTATDLDFVTFLTNCSSLKALSL 181 (833)
Q Consensus 121 ~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L 181 (833)
+|++|+|++|+|..+.. ..+..+++|+.|+|.+|.++.-+. --...+..+|+|+.||-
T Consensus 89 ~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~---YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 89 NLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKN---YRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp T--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTT---HHHHHHHH-TT-SEETT
T ss_pred cCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhh---HHHHHHHHcChhheeCC
Confidence 78888888888776544 345667777777777777754321 11233556677777653
No 469
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.28 E-value=3.9e-13 Score=137.21 Aligned_cols=210 Identities=23% Similarity=0.254 Sum_probs=116.9
Q ss_pred cCCCCCCEEEccCCcccccCC--ccCCCCCCCCEEEcCCCcccccC--CccccCCCCCcEEECCCcccccccCchhhcCC
Q 040925 20 GNLSDLEVIRIMGNSLGGKIP--TTLGLLRNLVSLNVAENKFSGMF--PRSICNISSLELIQLALNRFSGNLPFDIVVNL 95 (833)
Q Consensus 20 ~~l~~L~~L~l~~n~l~~~~~--~~~~~l~~L~~L~L~~n~i~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l 95 (833)
+++..|+.+.|.+..+. ..+ +....+++++.||||+|-+.... -.-...|++|+.|+||.|++........-..+
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 45566777777777773 333 35566777777777777665322 23345567777777777776533333333355
Q ss_pred CCccEEEccCCcceee-CCccccCCCCCcEEEcccCccccccCcCccCCCcCceEecccccCCCCCCCCcccccccCCCC
Q 040925 96 PNLKALAIGGNNFFGS-IPYSLSNASNLELLDLSVNQFKGNVSIDFSSLKNLLWLNLEQNNLGTGTATDLDFVTFLTNCS 174 (833)
Q Consensus 96 ~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~ 174 (833)
+.|+.|.|+.|.++.. +-......++|+.|+|+.|.+-.+....+.-+..|+.|+|++|++-+.+. ......++
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~-----~~~~~~l~ 271 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQ-----GYKVGTLP 271 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCccccccc-----cccccccc
Confidence 6666666666666521 12223445666666666664333444455555666666666666543221 12344555
Q ss_pred CCCEEEccCCcCcccCChhHhhhcccccEEEccCccccccCChhhhcCCCCCeEeccCCccccc-CCcc-----ccCCCC
Q 040925 175 SLKALSLADNQFGGELPHSIANLSSTVINFGIGRNQISGTIPPGIRNLVNLIGFGAEENQLHGT-IPDA-----IGELKN 248 (833)
Q Consensus 175 ~L~~L~Ls~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~-----~~~l~~ 248 (833)
.|..|+++.+.+. ++ .|+. ...+++
T Consensus 272 ~L~~Lnls~tgi~-------------------------------------------------si~~~d~~s~~kt~~f~k 302 (505)
T KOG3207|consen 272 GLNQLNLSSTGIA-------------------------------------------------SIAEPDVESLDKTHTFPK 302 (505)
T ss_pred chhhhhccccCcc-------------------------------------------------hhcCCCccchhhhccccc
Confidence 5555555555544 21 1111 234567
Q ss_pred CCEEEcccccCccc-CCccccCCCCCCeEEeeccccc
Q 040925 249 LQKLCLFRNFLQGR-IPSGLGNLTKLANLELSSNSLQ 284 (833)
Q Consensus 249 L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~ 284 (833)
|++|+++.|+|... .-+.+..+.+|+.|....|.+.
T Consensus 303 L~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 303 LEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred ceeeecccCccccccccchhhccchhhhhhccccccc
Confidence 77777777777521 1123445667777777777776
No 470
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.27 E-value=8.7e-13 Score=127.76 Aligned_cols=136 Identities=26% Similarity=0.285 Sum_probs=89.7
Q ss_pred CCCCCccceeecCCceecccCCcccccccccceeeecCCCccCCCCCcccccCCCcCEEeccCCcCCCCCCccccCCCCC
Q 040925 291 LGNCQNLMSFTASQNKLTGALPHQLLSITTLSLYLDLSNNLLNGSLPLQVGHLKNLVILDISSNQFSGVIPGTLSTCVCL 370 (833)
Q Consensus 291 ~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L 370 (833)
....+.|++++||+|.|+ .+.++..-.+.+ +.|++|+|.|.. +. .+..|++|+.||||+|.++ ...++-..+.+.
T Consensus 280 ~dTWq~LtelDLS~N~I~-~iDESvKL~Pki-r~L~lS~N~i~~-v~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNI 354 (490)
T KOG1259|consen 280 ADTWQELTELDLSGNLIT-QIDESVKLAPKL-RRLILSQNRIRT-VQ-NLAELPQLQLLDLSGNLLA-ECVGWHLKLGNI 354 (490)
T ss_pred cchHhhhhhccccccchh-hhhhhhhhccce-eEEeccccceee-eh-hhhhcccceEeecccchhH-hhhhhHhhhcCE
Confidence 344556777777777776 566555555555 667777777762 22 3667777777777777776 445556667777
Q ss_pred cEEeecCCccccccCccccCCCCCCeEEccCcccCCCc-hhhhcCCCCCceEECccCcCccccC
Q 040925 371 EYLDISSNSFHGVIPLSLSFLKSIKELNVSSNNLSGQI-PEFLKNLSVLEFLSLSYNHFEGEVP 433 (833)
Q Consensus 371 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~-p~~l~~l~~L~~L~l~~N~l~~~~~ 433 (833)
+.|.|+.|.|.+. ..+..+-+|..||+++|+|.... -..+++++-|+.+.|.+|++.+.+.
T Consensus 355 KtL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 355 KTLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred eeeehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 7777777777643 24566677777777777776321 2456777777777777777776654
No 471
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.24 E-value=7.9e-13 Score=145.83 Aligned_cols=247 Identities=27% Similarity=0.325 Sum_probs=179.2
Q ss_pred cCCCCCCEEEccCCcccccCCccCCCCCCCCEEEcCCCcccccCCccccCCCCCcEEECCCcccccccCchhhcCCCCcc
Q 040925 20 GNLSDLEVIRIMGNSLGGKIPTTLGLLRNLVSLNVAENKFSGMFPRSICNISSLELIQLALNRFSGNLPFDIVVNLPNLK 99 (833)
Q Consensus 20 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~ 99 (833)
..+..++.+++..|.|. .+-..++.+++|+.|++.+|+|.. +...+..+++|+.|+|++|.|+ .+.. +..++.|+
T Consensus 69 ~~l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls~N~I~-~i~~--l~~l~~L~ 143 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDLSFNKIT-KLEG--LSTLTLLK 143 (414)
T ss_pred HHhHhHHhhccchhhhh-hhhcccccccceeeeeccccchhh-cccchhhhhcchheeccccccc-cccc--hhhccchh
Confidence 45677888889999994 455668889999999999999984 3434888999999999999998 4432 45677899
Q ss_pred EEEccCCcceeeCCccccCCCCCcEEEcccCccccccC-cCccCCCcCceEecccccCCCCCCCCcccccccCCCCCCCE
Q 040925 100 ALAIGGNNFFGSIPYSLSNASNLELLDLSVNQFKGNVS-IDFSSLKNLLWLNLEQNNLGTGTATDLDFVTFLTNCSSLKA 178 (833)
Q Consensus 100 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~ 178 (833)
.|++++|.|+. ...|..+.+|+.+++++|++..+.. . ...+.+|+.+.+++|.+..+.. +..+..+..
T Consensus 144 ~L~l~~N~i~~--~~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i~~--------~~~~~~l~~ 212 (414)
T KOG0531|consen 144 ELNLSGNLISD--ISGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREIEG--------LDLLKKLVL 212 (414)
T ss_pred hheeccCcchh--ccCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcccc--------hHHHHHHHH
Confidence 99999999973 3456779999999999999997776 3 5788999999999999977543 334455556
Q ss_pred EEccCCcCcccCChhHhhhcccccEEEccCccccccCChhhhcCC--CCCeEeccCCcccccCCccccCCCCCCEEEccc
Q 040925 179 LSLADNQFGGELPHSIANLSSTVINFGIGRNQISGTIPPGIRNLV--NLIGFGAEENQLHGTIPDAIGELKNLQKLCLFR 256 (833)
Q Consensus 179 L~Ls~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~--~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 256 (833)
+++..|.++..-+ +..+. +|+.+++++|.+.. .+..+..+.++..|++.+
T Consensus 213 ~~l~~n~i~~~~~---------------------------l~~~~~~~L~~l~l~~n~i~~-~~~~~~~~~~l~~l~~~~ 264 (414)
T KOG0531|consen 213 LSLLDNKISKLEG---------------------------LNELVMLHLRELYLSGNRISR-SPEGLENLKNLPVLDLSS 264 (414)
T ss_pred hhcccccceeccC---------------------------cccchhHHHHHHhcccCcccc-ccccccccccccccchhh
Confidence 6788887762111 11111 47778888888773 335666778888888888
Q ss_pred ccCcccCCccccCCCCCCeEEeecccccCC---CCC-CCCCCCccceeecCCceecccCC
Q 040925 257 NFLQGRIPSGLGNLTKLANLELSSNSLQGN---IPS-SLGNCQNLMSFTASQNKLTGALP 312 (833)
Q Consensus 257 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~-~~~~l~~L~~L~l~~N~l~~~~p 312 (833)
|.+... ..+.....+..+.+..|.+... ... .....+.+..+.+..|.+....+
T Consensus 265 n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 265 NRISNL--EGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred cccccc--ccccccchHHHhccCcchhcchhhhhccccccccccccccccccCccccccc
Confidence 888743 3355667777777777776522 111 14556778888888888774443
No 472
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.23 E-value=9.4e-13 Score=145.23 Aligned_cols=267 Identities=28% Similarity=0.297 Sum_probs=193.7
Q ss_pred CCCCEEEccCCcccccCCccC-CCCCCCCEEEcCCCcccccCCccccCCCCCcEEECCCcccccccCchhhcCCCCccEE
Q 040925 23 SDLEVIRIMGNSLGGKIPTTL-GLLRNLVSLNVAENKFSGMFPRSICNISSLELIQLALNRFSGNLPFDIVVNLPNLKAL 101 (833)
Q Consensus 23 ~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L 101 (833)
+.++.++...+.+.. ...+ ..+..++.+++..|.|. ..-..+..+.+|+.|++.+|+|. .+... +..+++|++|
T Consensus 49 ~~~~~~~~~~~~~~~--~~~~~~~l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~-~i~~~-l~~~~~L~~L 123 (414)
T KOG0531|consen 49 SDLEEIDLIFNLDGS--DEDLVESLTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIE-KIENL-LSSLVNLQVL 123 (414)
T ss_pred chhhhhcchhccccc--hhhhHHHhHhHHhhccchhhhh-hhhcccccccceeeeeccccchh-hcccc-hhhhhcchhe
Confidence 356667777766622 2222 56788888999999998 45666899999999999999998 55432 4679999999
Q ss_pred EccCCcceeeCCccccCCCCCcEEEcccCccccccCcCccCCCcCceEecccccCCCCCCCCcccccccCCCCCCCEEEc
Q 040925 102 AIGGNNFFGSIPYSLSNASNLELLDLSVNQFKGNVSIDFSSLKNLLWLNLEQNNLGTGTATDLDFVTFLTNCSSLKALSL 181 (833)
Q Consensus 102 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~L 181 (833)
+|++|.|+.+. .+..++.|+.|++++|.|+.+. .|..+++|+.+++++|.+..+... . ...+.+++.+++
T Consensus 124 ~ls~N~I~~i~--~l~~l~~L~~L~l~~N~i~~~~--~~~~l~~L~~l~l~~n~i~~ie~~-----~-~~~~~~l~~l~l 193 (414)
T KOG0531|consen 124 DLSFNKITKLE--GLSTLTLLKELNLSGNLISDIS--GLESLKSLKLLDLSYNRIVDIEND-----E-LSELISLEELDL 193 (414)
T ss_pred ecccccccccc--chhhccchhhheeccCcchhcc--CCccchhhhcccCCcchhhhhhhh-----h-hhhccchHHHhc
Confidence 99999998554 4677888999999999999654 566699999999999999876541 1 357889999999
Q ss_pred cCCcCcccCChhHhhhcccccEEEccCccccccCChhhhcCCCCCeEeccCCcccccCCccccCCC--CCCEEEcccccC
Q 040925 182 ADNQFGGELPHSIANLSSTVINFGIGRNQISGTIPPGIRNLVNLIGFGAEENQLHGTIPDAIGELK--NLQKLCLFRNFL 259 (833)
Q Consensus 182 s~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~--~L~~L~L~~N~l 259 (833)
++|.+.. ...+..+..+..+++..|.+..+-+ +..+. +|+.+++++|.+
T Consensus 194 ~~n~i~~---------------------------i~~~~~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i 244 (414)
T KOG0531|consen 194 GGNSIRE---------------------------IEGLDLLKKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRI 244 (414)
T ss_pred cCCchhc---------------------------ccchHHHHHHHHhhcccccceeccC--cccchhHHHHHHhcccCcc
Confidence 9998861 1222333344455788888874332 22233 389999999999
Q ss_pred cccCCccccCCCCCCeEEeecccccCCCCCCCCCCCccceeecCCceeccc---CCcc-cccccccceeeecCCCccCCC
Q 040925 260 QGRIPSGLGNLTKLANLELSSNSLQGNIPSSLGNCQNLMSFTASQNKLTGA---LPHQ-LLSITTLSLYLDLSNNLLNGS 335 (833)
Q Consensus 260 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~---~p~~-~~~~~~ll~~L~ls~N~l~~~ 335 (833)
. ..+..+..+.++..|++.+|++... ..+...+.+..+.+..|.+... .... ......+ +.+.+..|.+...
T Consensus 245 ~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 320 (414)
T KOG0531|consen 245 S-RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTL-VTLTLELNPIRKI 320 (414)
T ss_pred c-cccccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhhhhccccccccccc-cccccccCccccc
Confidence 8 4557788899999999999999754 3356677788888888887622 1111 2333333 5677777777654
Q ss_pred CC
Q 040925 336 LP 337 (833)
Q Consensus 336 ~~ 337 (833)
.+
T Consensus 321 ~~ 322 (414)
T KOG0531|consen 321 SS 322 (414)
T ss_pred cc
Confidence 43
No 473
>PLN03150 hypothetical protein; Provisional
Probab=99.22 E-value=3e-11 Score=139.18 Aligned_cols=112 Identities=35% Similarity=0.479 Sum_probs=104.2
Q ss_pred ceeeecCCCccCCCCCcccccCCCcCEEeccCCcCCCCCCccccCCCCCcEEeecCCccccccCccccCCCCCCeEEccC
Q 040925 322 SLYLDLSNNLLNGSLPLQVGHLKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNVSS 401 (833)
Q Consensus 322 l~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~ 401 (833)
+..|+|++|.+.+.+|..++.+++|+.|+|++|.+++.+|..+..+++|+.|+|++|++++.+|..+..+++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCchhhhcCC-CCCceEECccCcCccccC
Q 040925 402 NNLSGQIPEFLKNL-SVLEFLSLSYNHFEGEVP 433 (833)
Q Consensus 402 N~l~~~~p~~l~~l-~~L~~L~l~~N~l~~~~~ 433 (833)
|++++.+|..+..+ .++..+++.+|+..|..|
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p 532 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP 532 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCccccCCC
Confidence 99999999998764 467789999998877655
No 474
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.20 E-value=5.1e-13 Score=132.83 Aligned_cols=138 Identities=20% Similarity=0.276 Sum_probs=83.2
Q ss_pred CCCCeEEeecccccCCC----CCCCCCCCccceeecCCceecccCCcccccccccceeeecCCCccCCCCCcccccCCCc
Q 040925 271 TKLANLELSSNSLQGNI----PSSLGNCQNLMSFTASQNKLTGALPHQLLSITTLSLYLDLSNNLLNGSLPLQVGHLKNL 346 (833)
Q Consensus 271 ~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~ll~~L~ls~N~l~~~~~~~~~~l~~L 346 (833)
++|+++...+|++.... ...|...+.|+.+.++.|.|. |... + .....|..++.|
T Consensus 157 ~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~---~eG~-----------------~-al~eal~~~~~L 215 (382)
T KOG1909|consen 157 PKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIR---PEGV-----------------T-ALAEALEHCPHL 215 (382)
T ss_pred cceEEEEeeccccccccHHHHHHHHHhccccceEEEeccccc---Cchh-----------------H-HHHHHHHhCCcc
Confidence 55666666666665321 224445555666666555553 1111 0 123456677888
Q ss_pred CEEeccCCcCCC----CCCccccCCCCCcEEeecCCccccccCccc-----cCCCCCCeEEccCcccCC----Cchhhhc
Q 040925 347 VILDISSNQFSG----VIPGTLSTCVCLEYLDISSNSFHGVIPLSL-----SFLKSIKELNVSSNNLSG----QIPEFLK 413 (833)
Q Consensus 347 ~~L~ls~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-----~~l~~L~~L~l~~N~l~~----~~p~~l~ 413 (833)
+.|||..|-++. ....++..+++|++|++++|.+..--..+| ...++|+.|.+.+|.|+. .+...+.
T Consensus 216 evLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ 295 (382)
T KOG1909|consen 216 EVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMA 295 (382)
T ss_pred eeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHh
Confidence 888888888753 233456777788888888887764322222 335778888888888763 2233445
Q ss_pred CCCCCceEECccCcCc
Q 040925 414 NLSVLEFLSLSYNHFE 429 (833)
Q Consensus 414 ~l~~L~~L~l~~N~l~ 429 (833)
..+.|..|+|++|.+.
T Consensus 296 ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 296 EKPDLEKLNLNGNRLG 311 (382)
T ss_pred cchhhHHhcCCccccc
Confidence 5677778888887773
No 475
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.17 E-value=9e-12 Score=120.82 Aligned_cols=199 Identities=24% Similarity=0.188 Sum_probs=135.4
Q ss_pred ccCCCCCCEEEcccccCcccCCccccCCCCCCeEEeecccccCCCCCCCCCCCccceeecCC-ceecccCCccccccccc
Q 040925 243 IGELKNLQKLCLFRNFLQGRIPSGLGNLTKLANLELSSNSLQGNIPSSLGNCQNLMSFTASQ-NKLTGALPHQLLSITTL 321 (833)
Q Consensus 243 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~-N~l~~~~p~~~~~~~~l 321 (833)
+.-+.+|+.+.++++.-.. +.+....-+.|+++...+.-++. .|. +-..+.+....-+. .-.+|..-..+-.+..+
T Consensus 210 l~~f~~l~~~~~s~~~~~~-i~~~~~~kptl~t~~v~~s~~~~-~~~-l~pe~~~~D~~~~E~~t~~G~~~~~~dTWq~L 286 (490)
T KOG1259|consen 210 LNAFRNLKTLKFSALSTEN-IVDIELLKPTLQTICVHNTTIQD-VPS-LLPETILADPSGSEPSTSNGSALVSADTWQEL 286 (490)
T ss_pred hHHhhhhheeeeeccchhh-eeceeecCchhheeeeecccccc-ccc-ccchhhhcCccCCCCCccCCceEEecchHhhh
Confidence 3444556666666554331 12222233567777766655541 111 11112222111111 11112222233334444
Q ss_pred ceeeecCCCccCCCCCcccccCCCcCEEeccCCcCCCCCCccccCCCCCcEEeecCCccccccCccccCCCCCCeEEccC
Q 040925 322 SLYLDLSNNLLNGSLPLQVGHLKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNVSS 401 (833)
Q Consensus 322 l~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~ 401 (833)
..+|||+|.|+ .+.++..-++.++.|++|+|.|..+ +.++.+++|+.||||+|.++ ...++-..+-++++|.|+.
T Consensus 287 -telDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La~ 361 (490)
T KOG1259|consen 287 -TELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLAQ 361 (490)
T ss_pred -hhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehhh
Confidence 67999999999 6777888899999999999999854 34999999999999999999 5667788899999999999
Q ss_pred cccCCCchhhhcCCCCCceEECccCcCcccc--CCCCccCCCccccccCCcC
Q 040925 402 NNLSGQIPEFLKNLSVLEFLSLSYNHFEGEV--PTKGVFSNKTKISLQGNMK 451 (833)
Q Consensus 402 N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~--~~~~~~~~~~~l~l~~N~~ 451 (833)
|.|... ..++.+.+|..||+++|++...- ..+|.++-+..+.+.+||.
T Consensus 362 N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl 411 (490)
T KOG1259|consen 362 NKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPL 411 (490)
T ss_pred hhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCc
Confidence 999743 46889999999999999998644 3457888888999999974
No 476
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.17 E-value=6.2e-12 Score=128.55 Aligned_cols=88 Identities=25% Similarity=0.211 Sum_probs=42.3
Q ss_pred CCCCccEEEccCCcceeeCC--ccccCCCCCcEEEcccCccccccCc--CccCCCcCceEecccccCCCCCCCCcccccc
Q 040925 94 NLPNLKALAIGGNNFFGSIP--YSLSNASNLELLDLSVNQFKGNVSI--DFSSLKNLLWLNLEQNNLGTGTATDLDFVTF 169 (833)
Q Consensus 94 ~l~~L~~L~L~~N~l~~~~~--~~~~~l~~L~~L~L~~N~i~~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~ 169 (833)
++.+|+...|.+..+. ..+ .....+++++.||||+|-+..+.+- ....|++|+.|+|+.|++.........
T Consensus 119 n~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~---- 193 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTT---- 193 (505)
T ss_pred hHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccch----
Confidence 3444555555555553 222 2344555556666666555433321 234555555555555555443222111
Q ss_pred cCCCCCCCEEEccCCcCc
Q 040925 170 LTNCSSLKALSLADNQFG 187 (833)
Q Consensus 170 l~~l~~L~~L~Ls~N~l~ 187 (833)
..+++|+.|.|+.|.++
T Consensus 194 -~~l~~lK~L~l~~CGls 210 (505)
T KOG3207|consen 194 -LLLSHLKQLVLNSCGLS 210 (505)
T ss_pred -hhhhhhheEEeccCCCC
Confidence 13455555555555554
No 477
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.15 E-value=1.8e-12 Score=128.98 Aligned_cols=255 Identities=17% Similarity=0.240 Sum_probs=128.4
Q ss_pred ccCCCCCCEEEccCCcccc----cCCccCCCCCCCCEEEcCCCcc---ccc-------CCccccCCCCCcEEECCCcccc
Q 040925 19 VGNLSDLEVIRIMGNSLGG----KIPTTLGLLRNLVSLNVAENKF---SGM-------FPRSICNISSLELIQLALNRFS 84 (833)
Q Consensus 19 ~~~l~~L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~L~~n~i---~~~-------~~~~~~~l~~L~~L~L~~N~l~ 84 (833)
+-....++.|+|+||.+.. .+...+.+.++|+..++|+--- ... +.+++..+++|++||||.|-+.
T Consensus 26 ~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G 105 (382)
T KOG1909|consen 26 LEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFG 105 (382)
T ss_pred hcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccC
Confidence 4445566677777777632 2233345556666666665221 111 1233444555666666665553
Q ss_pred cccC---chhhcCCCCccEEEccCCcceeeCCccccCCCCCcEEEcccCccccccCcCccCCCcCceEecccccCCCCCC
Q 040925 85 GNLP---FDIVVNLPNLKALAIGGNNFFGSIPYSLSNASNLELLDLSVNQFKGNVSIDFSSLKNLLWLNLEQNNLGTGTA 161 (833)
Q Consensus 85 ~~~~---~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 161 (833)
-.-+ .+.+....+|++|+|.+|.+.-.--..++. .|.+|. .++ -..+-++|+.+...+|++...+.
T Consensus 106 ~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l~-~~k--------k~~~~~~Lrv~i~~rNrlen~ga 174 (382)
T KOG1909|consen 106 PKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR--ALFELA-VNK--------KAASKPKLRVFICGRNRLENGGA 174 (382)
T ss_pred ccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH--HHHHHH-HHh--------ccCCCcceEEEEeeccccccccH
Confidence 1111 122334445555555555443110011110 111111 000 11223456666666666655444
Q ss_pred CCcccccccCCCCCCCEEEccCCcCcccCChhHhhhcccccEEEccCccccccCChhhhcCCCCCeEeccCCcccc----
Q 040925 162 TDLDFVTFLTNCSSLKALSLADNQFGGELPHSIANLSSTVINFGIGRNQISGTIPPGIRNLVNLIGFGAEENQLHG---- 237 (833)
Q Consensus 162 ~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~---- 237 (833)
.. +...|...+.|+.+.++.|.|. |+.+ ......|..+++|+.|||.+|-++.
T Consensus 175 ~~--~A~~~~~~~~leevr~~qN~I~---~eG~------------------~al~eal~~~~~LevLdl~DNtft~egs~ 231 (382)
T KOG1909|consen 175 TA--LAEAFQSHPTLEEVRLSQNGIR---PEGV------------------TALAEALEHCPHLEVLDLRDNTFTLEGSV 231 (382)
T ss_pred HH--HHHHHHhccccceEEEeccccc---Cchh------------------HHHHHHHHhCCcceeeecccchhhhHHHH
Confidence 32 2344555566666666666654 1111 0223456666777777777776653
Q ss_pred cCCccccCCCCCCEEEcccccCcccCCccc-----cCCCCCCeEEeecccccCC----CCCCCCCCCccceeecCCcee
Q 040925 238 TIPDAIGELKNLQKLCLFRNFLQGRIPSGL-----GNLTKLANLELSSNSLQGN----IPSSLGNCQNLMSFTASQNKL 307 (833)
Q Consensus 238 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-----~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l 307 (833)
.+..++..+++|++|++++|.++.....+| ...++|+.|.|.+|.|+.. +...+...+.|..|+|++|++
T Consensus 232 ~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 232 ALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred HHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 234455666777777777777765433332 1356777777777777622 222344466777777777777
No 478
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.15 E-value=4.4e-11 Score=128.88 Aligned_cols=250 Identities=18% Similarity=0.112 Sum_probs=166.5
Q ss_pred HHHHhcCCccCceeccCcceEEEEEEEC-CCceEEEEEEeeccCCcch--hHHHHHHHHHhhc-CCCccceEeeEeecCC
Q 040925 526 LSKATGEFSSSNMIGQGSFGYVYKGTLG-EDEMIVAVKVINLKYKGAS--RSFVAECEALRNI-RHRNLIKIITICSSTD 601 (833)
Q Consensus 526 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~~--~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 601 (833)
......+|..+..||.|.|+.|+.+..+ .++..|++|.......... ..-..|+.+...+ .|.+++..+..+....
T Consensus 260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r 339 (524)
T KOG0601|consen 260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR 339 (524)
T ss_pred ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccc
Confidence 4455678999999999999999998766 6788999998864433322 2234566666666 4888887665543332
Q ss_pred CCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCC-Cc
Q 040925 602 FKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHD-MV 680 (833)
Q Consensus 602 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~-~~ 680 (833)
..|+=-|||++++....+.-.. .+++..++++..|++.++.++|+. .++|+|+||+||++..+ +.
T Consensus 340 -----~~~ip~e~~~~~s~~l~~~~~~------~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~ 405 (524)
T KOG0601|consen 340 -----QGYIPLEFCEGGSSSLRSVTSQ------MLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFF 405 (524)
T ss_pred -----cccCchhhhcCcchhhhhHHHH------hcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhh
Confidence 5668889999998877663222 678889999999999999999999 99999999999999886 78
Q ss_pred EEEcccccccccCcccccccccCCCccccccccccc-cCccccCCCCCCcccccccCCcCCCccccCCccHHHHHHHhC-
Q 040925 681 AHVCDFGLAKFLSDHQLDTAVKTPSSSIGLKGTVGY-VAPEYGMGSEASMTGDIFTGRRPIDAVFNEGHSLHEFAKTAL- 758 (833)
Q Consensus 681 ~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y-~aPE~~~~~~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~- 758 (833)
.++.|||++..+.-..... ..++..| .+|+......+..++|++|.+..+.+ ..++..
T Consensus 406 ~~~~~~~~~t~~~~~~~~~----------~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e----------~~~~~~l 465 (524)
T KOG0601|consen 406 SKLGDFGCWTRLAFSSGVF----------HHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDE----------AITGSPL 465 (524)
T ss_pred hhccccccccccceecccc----------cccccccccchhhccccccccccccccccccccc----------cccCccc
Confidence 8999999986432211100 1133444 35666666778899999996655543 222221
Q ss_pred CCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHHH
Q 040925 759 PEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMRDVVAKLC 822 (833)
Q Consensus 759 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 822 (833)
++.... . ........ +........+..+...+...++..||.+.+.....+
T Consensus 466 s~~~~~-~-----~~i~~~~~-------p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~ 516 (524)
T KOG0601|consen 466 SESGVQ-S-----LTIRSGDT-------PNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSE 516 (524)
T ss_pred Cccccc-c-----eeeecccc-------cCCCchHHhhhhhhhhhcCCccccchhhhhhcccch
Confidence 111000 0 00000000 001111245666777789999999999988765443
No 479
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.11 E-value=8.6e-10 Score=101.39 Aligned_cols=129 Identities=28% Similarity=0.411 Sum_probs=93.4
Q ss_pred ceeccCcceEEEEEEECCCceEEEEEEe-eccCCc-------chhHHHHHHHHHhhcCCC--ccceEeeEeecCCCCCCc
Q 040925 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVI-NLKYKG-------ASRSFVAECEALRNIRHR--NLIKIITICSSTDFKGTD 606 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~-~~~~~~-------~~~~~~~E~~~l~~l~h~--niv~~~~~~~~~~~~~~~ 606 (833)
..+++|+-+.+|.+.+. |..+++|.= ++.... ...+..+|++++++++-- ++..++++ +. .
T Consensus 2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dv--D~-----~ 72 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDV--DP-----D 72 (204)
T ss_pred chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEE--cC-----C
Confidence 46789999999999774 444666642 221111 124678899999998643 33444444 22 2
Q ss_pred eEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccc
Q 040925 607 FKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDF 686 (833)
Q Consensus 607 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 686 (833)
...++|||++|-.|.+++... ...++..+-.-+.-||.. ||||+|+.++||+++.+. +.++||
T Consensus 73 ~~~I~me~I~G~~lkd~l~~~-------------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDf 135 (204)
T COG3642 73 NGLIVMEYIEGELLKDALEEA-------------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDF 135 (204)
T ss_pred CCEEEEEEeCChhHHHHHHhc-------------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEEC
Confidence 557999999998899888754 134566666777789999 999999999999997665 999999
Q ss_pred ccccc
Q 040925 687 GLAKF 691 (833)
Q Consensus 687 G~a~~ 691 (833)
|++..
T Consensus 136 GLg~~ 140 (204)
T COG3642 136 GLGEF 140 (204)
T ss_pred Ccccc
Confidence 99973
No 480
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.10 E-value=8.9e-10 Score=111.25 Aligned_cols=145 Identities=23% Similarity=0.321 Sum_probs=110.5
Q ss_pred ceeccCcceEEEEEEECCCceEEEEEEeeccCC-cchhHHHHHHHHHhhcCC--CccceEeeEeecCCCCCCceEeEEEE
Q 040925 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-GASRSFVAECEALRNIRH--RNLIKIITICSSTDFKGTDFKAFVFE 613 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~~~~lv~e 613 (833)
+.++.|..+.||+++.. +|+.+++|....... .....+.+|+++++.+++ ..+.+++.+..... ..+..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~--~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPS--VLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEec-CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCC--ccCCceEEEE
Confidence 57899999999999885 367899999764322 134678999999999975 44677777754322 1125689999
Q ss_pred ecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcC----------------------------------
Q 040925 614 YMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHC---------------------------------- 659 (833)
Q Consensus 614 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~---------------------------------- 659 (833)
|++|+++.+.+.. . .++..+...++.+++++|+.||+..
T Consensus 81 ~i~G~~l~~~~~~-~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (223)
T cd05154 81 RVDGRVLRDRLLR-P------ELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDE 153 (223)
T ss_pred EeCCEecCCCCCC-C------CCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccc
Confidence 9999888876542 1 4677788888889999999998531
Q ss_pred -------------------CCCceeeCCCCCCeeecC--CCcEEEcccccccc
Q 040925 660 -------------------QPPMVHGDLKPSNVLLDH--DMVAHVCDFGLAKF 691 (833)
Q Consensus 660 -------------------~~~ivH~Dlkp~NIll~~--~~~~kL~DfG~a~~ 691 (833)
...++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 154 PPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred cHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 246799999999999998 66789999998863
No 481
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.08 E-value=1.2e-09 Score=99.67 Aligned_cols=142 Identities=23% Similarity=0.324 Sum_probs=100.9
Q ss_pred cCceeccCcceEEEEEEECCCceEEEEEE-eeccCC-------cchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCc
Q 040925 535 SSNMIGQGSFGYVYKGTLGEDEMIVAVKV-INLKYK-------GASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTD 606 (833)
Q Consensus 535 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~-~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 606 (833)
....+-+|+-+.|+++.+. |+.+.||. +.+... -..++..+|++.+.++.--.|.--.-++.+..
T Consensus 11 ~l~likQGAEArv~~~~~~--Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~----- 83 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS--GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTY----- 83 (229)
T ss_pred cceeeeccceeeEeeeccC--CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecC-----
Confidence 5678899999999999984 67766764 222211 12357889999999986333322222222222
Q ss_pred eEeEEEEecCC-CChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCC---cEE
Q 040925 607 FKAFVFEYMEN-GSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM---VAH 682 (833)
Q Consensus 607 ~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~k 682 (833)
.-.++|||++| .++.+++...... .........++.+|-+.+.-||.. +|||+||..+||++..++ .+.
T Consensus 84 ~~~i~ME~~~g~~~vk~~i~~~~~~----~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~ 156 (229)
T KOG3087|consen 84 GGQIYMEFIDGASTVKDFILSTMED----ESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPI 156 (229)
T ss_pred CCeEEEEeccchhHHHHHHHHHccC----cccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceE
Confidence 45799999976 3788888765432 233334477888999999999999 999999999999997665 468
Q ss_pred Eccccccc
Q 040925 683 VCDFGLAK 690 (833)
Q Consensus 683 L~DfG~a~ 690 (833)
++|||++.
T Consensus 157 lIdfgls~ 164 (229)
T KOG3087|consen 157 LIDFGLSS 164 (229)
T ss_pred EEeecchh
Confidence 99999985
No 482
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=99.04 E-value=1.9e-10 Score=88.87 Aligned_cols=57 Identities=42% Similarity=0.610 Sum_probs=22.0
Q ss_pred CcEEECCCcccccccCchhhcCCCCccEEEccCCcceeeCCccccCCCCCcEEEcccC
Q 040925 73 LELIQLALNRFSGNLPFDIVVNLPNLKALAIGGNNFFGSIPYSLSNASNLELLDLSVN 130 (833)
Q Consensus 73 L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 130 (833)
|++|++++|+++ .+|.++|.++++|++|+|++|.++.+.|..|.++++|++|++++|
T Consensus 3 L~~L~l~~n~l~-~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N 59 (61)
T PF13855_consen 3 LESLDLSNNKLT-EIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNN 59 (61)
T ss_dssp ESEEEETSSTES-EECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSS
T ss_pred CcEEECCCCCCC-ccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCC
Confidence 333333333333 333333333333333333333333333333333333333333333
No 483
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=99.03 E-value=2.7e-10 Score=87.94 Aligned_cols=61 Identities=44% Similarity=0.579 Sum_probs=53.4
Q ss_pred CCccEEEccCCcceeeCCccccCCCCCcEEEcccCccccccCcCccCCCcCceEecccccC
Q 040925 96 PNLKALAIGGNNFFGSIPYSLSNASNLELLDLSVNQFKGNVSIDFSSLKNLLWLNLEQNNL 156 (833)
Q Consensus 96 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l 156 (833)
|+|++|+|++|+|+.+.+..|.++++|++|++++|+|+.+++.+|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 5788899999999887778899999999999999999988888899888888888888875
No 484
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.01 E-value=2.7e-09 Score=102.17 Aligned_cols=126 Identities=24% Similarity=0.235 Sum_probs=83.1
Q ss_pred EEEEEEECCCceEEEEEEeeccCC-------------c-------------chhHHHHHHHHHhhcCCC--ccceEeeEe
Q 040925 546 YVYKGTLGEDEMIVAVKVINLKYK-------------G-------------ASRSFVAECEALRNIRHR--NLIKIITIC 597 (833)
Q Consensus 546 ~Vy~~~~~~~~~~vavK~~~~~~~-------------~-------------~~~~~~~E~~~l~~l~h~--niv~~~~~~ 597 (833)
.||.|... +|..+|||+.+.... . ......+|.+.|.++... ++.+.+++.
T Consensus 1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 48999886 788999999863210 0 013467899999999754 567777652
Q ss_pred ecCCCCCCceEeEEEEecC--CCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHH-hhcCCCCceeeCCCCCCee
Q 040925 598 SSTDFKGTDFKAFVFEYME--NGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYL-HHHCQPPMVHGDLKPSNVL 674 (833)
Q Consensus 598 ~~~~~~~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~L-H~~~~~~ivH~Dlkp~NIl 674 (833)
..++||||++ |..+..+... .++......++.+++..+..+ |.. ||+|+|+.+.||+
T Consensus 80 ---------~~~ivME~I~~~G~~~~~l~~~--------~~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIl 139 (188)
T PF01163_consen 80 ---------RNVIVMEYIGEDGVPLPRLKDV--------DLSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNIL 139 (188)
T ss_dssp ---------TTEEEEE--EETTEEGGCHHHC--------GGGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEE
T ss_pred ---------CCEEEEEecCCCccchhhHHhc--------cccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEE
Confidence 2379999998 5445443332 122344566778888866664 677 9999999999999
Q ss_pred ecCCCcEEEcccccccccC
Q 040925 675 LDHDMVAHVCDFGLAKFLS 693 (833)
Q Consensus 675 l~~~~~~kL~DfG~a~~~~ 693 (833)
++++ .+.++|||.|....
T Consensus 140 v~~~-~~~iIDf~qav~~~ 157 (188)
T PF01163_consen 140 VDDG-KVYIIDFGQAVDSS 157 (188)
T ss_dssp EETT-CEEE--GTTEEETT
T ss_pred eecc-eEEEEecCcceecC
Confidence 9887 99999999887543
No 485
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=98.98 E-value=2.4e-09 Score=116.45 Aligned_cols=127 Identities=18% Similarity=0.223 Sum_probs=105.2
Q ss_pred EEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEEEecCCCChhhhhccCC
Q 040925 549 KGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSD 628 (833)
Q Consensus 549 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 628 (833)
.|..+.++.+|.|.+.+...........+-+..++.++||||+++++.+. ..+..|+|+|.+. .|..++++.
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e-----~~~~~ylvTErV~--Pl~~~lk~l- 101 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTE-----EEGTLYLVTERVR--PLETVLKEL- 101 (690)
T ss_pred ccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhc-----ccCceEEEeeccc--cHHHHHHHh-
Confidence 46667788999999987655544566788889999999999999998844 3448999999984 688888753
Q ss_pred CccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccC
Q 040925 629 DQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLS 693 (833)
Q Consensus 629 ~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 693 (833)
....+..-+.||+.||.|||..+ +++|++|.-+-|+++..|..||++|..+....
T Consensus 102 --------~~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~ 156 (690)
T KOG1243|consen 102 --------GKEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKAS 156 (690)
T ss_pred --------HHHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccc
Confidence 35567778899999999999776 99999999999999999999999999886543
No 486
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.92 E-value=6.1e-09 Score=101.76 Aligned_cols=137 Identities=26% Similarity=0.215 Sum_probs=101.5
Q ss_pred CccCceeccCcceEEEEEEECCCceEEEEEEeeccCC----------------------cchhHHHHHHHHHhhcCCC--
Q 040925 533 FSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK----------------------GASRSFVAECEALRNIRHR-- 588 (833)
Q Consensus 533 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----------------------~~~~~~~~E~~~l~~l~h~-- 588 (833)
+.+...||-|--|.||.|... .|.++|||.=+.... .......+|.++|.++...
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 445689999999999999997 788999996542210 0123578899999999754
Q ss_pred ccceEeeEeecCCCCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCC
Q 040925 589 NLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDL 668 (833)
Q Consensus 589 niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dl 668 (833)
.|.+.+++ +...+||||++|--|...- ++......++..|++-+.-.-.. ||||+|+
T Consensus 172 ~VP~P~~~---------nRHaVvMe~ieG~eL~~~r-----------~~~en~~~il~~il~~~~~~~~~---GiVHGDl 228 (304)
T COG0478 172 KVPKPIAW---------NRHAVVMEYIEGVELYRLR-----------LDVENPDEILDKILEEVRKAYRR---GIVHGDL 228 (304)
T ss_pred CCCCcccc---------ccceeeeehcccceeeccc-----------CcccCHHHHHHHHHHHHHHHHHc---CccccCC
Confidence 77777665 3568999999986555432 22334445566666666666667 9999999
Q ss_pred CCCCeeecCCCcEEEcccccccccC
Q 040925 669 KPSNVLLDHDMVAHVCDFGLAKFLS 693 (833)
Q Consensus 669 kp~NIll~~~~~~kL~DfG~a~~~~ 693 (833)
.+=||++++||.+.++||--+....
T Consensus 229 SefNIlV~~dg~~~vIDwPQ~v~~~ 253 (304)
T COG0478 229 SEFNILVTEDGDIVVIDWPQAVPIS 253 (304)
T ss_pred chheEEEecCCCEEEEeCcccccCC
Confidence 9999999999999999997765443
No 487
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.92 E-value=1.3e-09 Score=128.26 Aligned_cols=129 Identities=20% Similarity=0.247 Sum_probs=72.7
Q ss_pred CCCCEEEccCCcccccCCccCCCCCCCCEEEcCCCc--ccccCCccccCCCCCcEEECCCcccccccCchhhcCCCCccE
Q 040925 23 SDLEVIRIMGNSLGGKIPTTLGLLRNLVSLNVAENK--FSGMFPRSICNISSLELIQLALNRFSGNLPFDIVVNLPNLKA 100 (833)
Q Consensus 23 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~--i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~ 100 (833)
...+...+.+|.+ ..++..... ++|++|-+.+|. +..+.++.|..++.|+.||||+|.--+.+|..+ +.|-+|++
T Consensus 523 ~~~rr~s~~~~~~-~~~~~~~~~-~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I-~~Li~Lry 599 (889)
T KOG4658|consen 523 NSVRRMSLMNNKI-EHIAGSSEN-PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSI-GELVHLRY 599 (889)
T ss_pred hheeEEEEeccch-hhccCCCCC-CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHH-hhhhhhhc
Confidence 4555666666666 333333322 356666666664 443444445566666666666655433555444 45666666
Q ss_pred EEccCCcceeeCCccccCCCCCcEEEcccCccccccCcCccCCCcCceEeccccc
Q 040925 101 LAIGGNNFFGSIPYSLSNASNLELLDLSVNQFKGNVSIDFSSLKNLLWLNLEQNN 155 (833)
Q Consensus 101 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~ 155 (833)
|+|++..+. .+|..+++|..|.+|++..+.-....++....|.+|++|.+-.-.
T Consensus 600 L~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 600 LDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred ccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 666666665 556666666666666666665444445555556666666655443
No 488
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.91 E-value=5.1e-10 Score=131.56 Aligned_cols=125 Identities=23% Similarity=0.252 Sum_probs=102.8
Q ss_pred EEEcCCCcCcccCCccccCCCCCCEEEccCCc--ccccCCccCCCCCCCCEEEcCCCcccccCCccccCCCCCcEEECCC
Q 040925 3 TLAVNDNYLTGQLPDFVGNLSDLEVIRIMGNS--LGGKIPTTLGLLRNLVSLNVAENKFSGMFPRSICNISSLELIQLAL 80 (833)
Q Consensus 3 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~--l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 80 (833)
...+-+|.+. .++.+..+ +.|++|-+.+|. +....++.|..++.|++|||++|.=-+.+|..+++|-+|++|+|++
T Consensus 527 r~s~~~~~~~-~~~~~~~~-~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~ 604 (889)
T KOG4658|consen 527 RMSLMNNKIE-HIAGSSEN-PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSD 604 (889)
T ss_pred EEEEeccchh-hccCCCCC-CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccC
Confidence 4455566665 44444444 379999999996 6566666788999999999999887678999999999999999999
Q ss_pred cccccccCchhhcCCCCccEEEccCCcceeeCCccccCCCCCcEEEcccCc
Q 040925 81 NRFSGNLPFDIVVNLPNLKALAIGGNNFFGSIPYSLSNASNLELLDLSVNQ 131 (833)
Q Consensus 81 N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 131 (833)
..++ .+|..+ .+|.+|.+|++..+.-...+|.....|++|++|.+-.-.
T Consensus 605 t~I~-~LP~~l-~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 605 TGIS-HLPSGL-GNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred CCcc-ccchHH-HHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 9998 888766 789999999999988766778888889999999998766
No 489
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.91 E-value=2.7e-08 Score=101.43 Aligned_cols=146 Identities=14% Similarity=0.025 Sum_probs=100.8
Q ss_pred ceeccCcceEEEEEEECCCceEEEEEEeeccCC-----------cchhHHHHHHHHHhhcCCCc--cceEeeEeecCCCC
Q 040925 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK-----------GASRSFVAECEALRNIRHRN--LIKIITICSSTDFK 603 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~ 603 (833)
+.+-......|+++.. .|+.|.||....... .....+.+|.+.+.++...+ +++..++.......
T Consensus 28 e~v~~~~~rrvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~ 105 (268)
T PRK15123 28 EVFRELEGRRTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNP 105 (268)
T ss_pred cEEecCCCceEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCC
Confidence 3444444455777766 567899997742221 11124789999998884322 33444444322111
Q ss_pred CCceEeEEEEecCCC-ChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecC-----
Q 040925 604 GTDFKAFVFEYMENG-SLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDH----- 677 (833)
Q Consensus 604 ~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~----- 677 (833)
....-++|||++++. +|.+++...... ..+...+..++.+++..++-||.. ||+|+|+++.|||++.
T Consensus 106 ~~~~s~LVte~l~~~~sL~~~~~~~~~~----~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~ 178 (268)
T PRK15123 106 ATRTSFIITEDLAPTISLEDYCADWATN----PPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGR 178 (268)
T ss_pred ccceeEEEEeeCCCCccHHHHHHhhccc----CCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCC
Confidence 123568999999875 799998542211 455677789999999999999999 9999999999999975
Q ss_pred --CCcEEEcccccccc
Q 040925 678 --DMVAHVCDFGLAKF 691 (833)
Q Consensus 678 --~~~~kL~DfG~a~~ 691 (833)
++.+.++||+.+..
T Consensus 179 ~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 179 EEDLKLSVIDLHRAQI 194 (268)
T ss_pred CCCceEEEEECCcccc
Confidence 46899999998863
No 490
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.85 E-value=3e-08 Score=104.51 Aligned_cols=148 Identities=15% Similarity=0.154 Sum_probs=116.4
Q ss_pred cceEEEEEEECCCceEEEEEEeeccCCcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCCCceEeEEEEecCC-CChh
Q 040925 543 SFGYVYKGTLGEDEMIVAVKVINLKYKGASRSFVAECEALRNIRHRNLIKIITICSSTDFKGTDFKAFVFEYMEN-GSLK 621 (833)
Q Consensus 543 ~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-gsL~ 621 (833)
...+.|++...-+|..|++|+++............-+++++++.|+|||++..++....|. ....++|++|+++ ++|.
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~-D~SlvlvYDYyP~s~TL~ 366 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFG-DLSLVLVYDYYPSSPTLY 366 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccC-cceEEEEEecCCCCchHH
Confidence 4468899999999999999999533333333445568889999999999999998755443 3478999999986 5677
Q ss_pred hhhccCCCc---------cccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEccccccccc
Q 040925 622 DWLHQSDDQ---------VEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFL 692 (833)
Q Consensus 622 ~~l~~~~~~---------~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 692 (833)
++-...... ......++...|.++.|+..||.++|+. |..-+-|.|.+|+++.+.+++|...|....+
T Consensus 367 d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 367 DLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeee
Confidence 766543321 2233678899999999999999999999 9999999999999999999999888877654
Q ss_pred Cc
Q 040925 693 SD 694 (833)
Q Consensus 693 ~~ 694 (833)
..
T Consensus 444 ~~ 445 (655)
T KOG3741|consen 444 QE 445 (655)
T ss_pred cC
Confidence 43
No 491
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.80 E-value=1.2e-09 Score=123.75 Aligned_cols=258 Identities=19% Similarity=0.201 Sum_probs=169.8
Q ss_pred HHhcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccC---CcchhHHHHHHHHHhhcCCCccceEeeEeecCCCCC
Q 040925 528 KATGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKY---KGASRSFVAECEALRNIRHRNLIKIITICSSTDFKG 604 (833)
Q Consensus 528 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 604 (833)
...+++.+.+-+.+|+++.++.+.-..+|...+.|+..... ....+....+-.+.-..+||-++....- +.-
T Consensus 801 sS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s-----~~~ 875 (1205)
T KOG0606|consen 801 SSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPS-----FPC 875 (1205)
T ss_pred CCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCC-----CCC
Confidence 35567888889999999999999888777666666653221 1122233333333333345666654332 122
Q ss_pred CceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEc
Q 040925 605 TDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVC 684 (833)
Q Consensus 605 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 684 (833)
....++||+|+.+++|...++..+ ..+..-.+.....+..+.+|||+. .+.|||++|.|++...++..++.
T Consensus 876 rsP~~L~~~~~~~~~~~Skl~~~~------~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~ 946 (1205)
T KOG0606|consen 876 RSPLPLVGHYLNGGDLPSKLHNSG------CLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLT 946 (1205)
T ss_pred CCCcchhhHHhccCCchhhhhcCC------CcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccC
Confidence 335789999999999999988765 344555566677788999999998 89999999999999999999999
Q ss_pred ccccccccCcccccc---------------------ccc--CCCccccccccccccCccccCCCCCCcccccccCCcCCC
Q 040925 685 DFGLAKFLSDHQLDT---------------------AVK--TPSSSIGLKGTVGYVAPEYGMGSEASMTGDIFTGRRPID 741 (833)
Q Consensus 685 DfG~a~~~~~~~~~~---------------------~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~s~~~~~~ 741 (833)
|||......--.... ... .........||+.|.|||...+......+|+|+
T Consensus 947 ~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~------ 1020 (1205)
T KOG0606|consen 947 DFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWS------ 1020 (1205)
T ss_pred ccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhh------
Confidence 998443321110000 000 001233568999999999999999999999998
Q ss_pred ccccCCccHHHHHHHhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCCCCCCCCCCHH
Q 040925 742 AVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSMESPFERMDMR 815 (833)
Q Consensus 742 ~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ 815 (833)
.|+.+++..++..|+.....- .......... ..+..-+.+......+++...+..+|.+|-.+.
T Consensus 1021 ----~g~~l~e~l~g~pp~na~tpq--~~f~ni~~~~----~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1021 ----SGVCLFEVLTGIPPFNAETPQ--QIFENILNRD----IPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred ----hhhhhhhhhcCCCCCCCcchh--hhhhccccCC----CCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 788888888888876522110 0111111111 111112233445567777888889999997765
No 492
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.79 E-value=1.3e-10 Score=125.78 Aligned_cols=183 Identities=28% Similarity=0.281 Sum_probs=91.7
Q ss_pred CccccCCCCCCEEEcccccCcccCCccccCC-CCCCeEEeeccccc---CCCC---CCCCC---CCccceeecCCceecc
Q 040925 240 PDAIGELKNLQKLCLFRNFLQGRIPSGLGNL-TKLANLELSSNSLQ---GNIP---SSLGN---CQNLMSFTASQNKLTG 309 (833)
Q Consensus 240 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~L~~N~l~---~~~~---~~~~~---l~~L~~L~l~~N~l~~ 309 (833)
|-.+..+.+|+.|.|.++.|.. ..++..+ ..|++|...+ .++ .++. ..+++ ...|.+.+.+.|++.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~--~~GL~~lr~qLe~LIC~~-Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~- 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLST--AKGLQELRHQLEKLICHN-SLDALRHVFASCGGDISNSPVWNKLATASFSYNRLV- 177 (1096)
T ss_pred CceeccccceeeEEecCcchhh--hhhhHHHHHhhhhhhhhc-cHHHHHHHHHHhccccccchhhhhHhhhhcchhhHH-
Confidence 4345566777777777777763 1222221 2344444332 111 0000 11111 124555566666665
Q ss_pred cCCcccccccccceeeecCCCccCCCCCcccccCCCcCEEeccCCcCCCCCCccccCCCCCcEEeecCCccccccCcccc
Q 040925 310 ALPHQLLSITTLSLYLDLSNNLLNGSLPLQVGHLKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFHGVIPLSLS 389 (833)
Q Consensus 310 ~~p~~~~~~~~ll~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 389 (833)
.+...+.-++.+ +.|+|++|+++.. . .+..++.|+.|||++|.++.++--...++. |+.|.|++|.++... .+.
T Consensus 178 ~mD~SLqll~al-e~LnLshNk~~~v-~-~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~tL~--gie 251 (1096)
T KOG1859|consen 178 LMDESLQLLPAL-ESLNLSHNKFTKV-D-NLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALTTLR--GIE 251 (1096)
T ss_pred hHHHHHHHHHHh-hhhccchhhhhhh-H-HHHhcccccccccccchhccccccchhhhh-heeeeecccHHHhhh--hHH
Confidence 444444433333 5566666666522 2 455566666666666666533333334444 666666666665332 345
Q ss_pred CCCCCCeEEccCcccCCCc-hhhhcCCCCCceEECccCcCcccc
Q 040925 390 FLKSIKELNVSSNNLSGQI-PEFLKNLSVLEFLSLSYNHFEGEV 432 (833)
Q Consensus 390 ~l~~L~~L~l~~N~l~~~~-p~~l~~l~~L~~L~l~~N~l~~~~ 432 (833)
+|.+|+-||+++|-|++.. -..+..|..|+.|+|.+|++.|.+
T Consensus 252 ~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~p 295 (1096)
T KOG1859|consen 252 NLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCAP 295 (1096)
T ss_pred hhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccCH
Confidence 5666666666666665421 122344555666666666665544
No 493
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.68 E-value=3.4e-10 Score=122.54 Aligned_cols=123 Identities=30% Similarity=0.288 Sum_probs=60.1
Q ss_pred eecCCCccCCCCCcccccCCCcCEEeccCCcCCCCCCccccCCCCCcEEeecCCccccccCccccCCCCCCeEEccCccc
Q 040925 325 LDLSNNLLNGSLPLQVGHLKNLVILDISSNQFSGVIPGTLSTCVCLEYLDISSNSFHGVIPLSLSFLKSIKELNVSSNNL 404 (833)
Q Consensus 325 L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l 404 (833)
.+.++|++. ....++.-++.|+.|||++|+++... .+..|+.|++|||++|.++.++--...++. |+.|+++||.+
T Consensus 169 a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l 244 (1096)
T KOG1859|consen 169 ASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNAL 244 (1096)
T ss_pred hhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhhh-heeeeecccHH
Confidence 445555555 44444555555555555555554332 455555555555555555533333333333 55555555555
Q ss_pred CCCchhhhcCCCCCceEECccCcCccccCC--CCccCCCccccccCCcCCC
Q 040925 405 SGQIPEFLKNLSVLEFLSLSYNHFEGEVPT--KGVFSNKTKISLQGNMKLC 453 (833)
Q Consensus 405 ~~~~p~~l~~l~~L~~L~l~~N~l~~~~~~--~~~~~~~~~l~l~~N~~~c 453 (833)
+.. ..+.+|.+|+.||+++|-|.+--.. .+.+..+..+.++|||..|
T Consensus 245 ~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 245 TTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred Hhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 432 2344555555555555555432211 1334444555555555444
No 494
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.65 E-value=3.5e-07 Score=90.43 Aligned_cols=110 Identities=25% Similarity=0.298 Sum_probs=85.6
Q ss_pred hhHHHHHHHHHhhcC--CCccceEeeEeecCCCCCCceEeEEEEecCCC-ChhhhhccCCCccccccCCHHHHHHHHHHH
Q 040925 572 SRSFVAECEALRNIR--HRNLIKIITICSSTDFKGTDFKAFVFEYMENG-SLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648 (833)
Q Consensus 572 ~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~l~~~~~~~i~~qi 648 (833)
.....+|.+.+.++. .=.+.+.+++...... .....++|+|++++. +|.+++.... ..+......++.++
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~-~~~~s~lite~l~~~~~L~~~~~~~~------~~~~~~~~~ll~~l 127 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKG-GGYRSYLITEALPGAQDLRDLLQQWE------QLDPSQRRELLRAL 127 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCC-CceeEEEEEEeCCCcccHHHHHHhhc------ccchhhHHHHHHHH
Confidence 356888999888885 3335566666544321 123568999999874 7999987643 24566778899999
Q ss_pred HHHHHHHhhcCCCCceeeCCCCCCeeecCCC---cEEEcccccccc
Q 040925 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDM---VAHVCDFGLAKF 691 (833)
Q Consensus 649 ~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kL~DfG~a~~ 691 (833)
+..++-||+. ||+|+|++|.|||++.++ .+.++||+-++.
T Consensus 128 ~~~i~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 128 ARLIAKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHHHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 9999999999 999999999999999887 899999998764
No 495
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.63 E-value=2.2e-08 Score=109.68 Aligned_cols=157 Identities=15% Similarity=0.212 Sum_probs=108.2
Q ss_pred HHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccCcccccc-cccCCCccccccccccccCccccCCC
Q 040925 647 DVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSDHQLDT-AVKTPSSSIGLKGTVGYVAPEYGMGS 725 (833)
Q Consensus 647 qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~-~~~~~~~~~~~~gt~~y~aPE~~~~~ 725 (833)
+++.|+.|+|... ++||++|.|++|.+++.+..||+.|+++.....+.... ...++....-..-...|.|||++.+.
T Consensus 107 ~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~ 184 (700)
T KOG2137|consen 107 NVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT 184 (700)
T ss_pred cccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc
Confidence 4559999999885 99999999999999999999999999887654422111 11111111123356789999999998
Q ss_pred CCCcccccccCCcCCCccccCCccHHHHHHHhCCCcccccccccchhhhccccchhhhhhhhchHHHHHHHHHHhhccCC
Q 040925 726 EASMTGDIFTGRRPIDAVFNEGHSLHEFAKTALPEKVMEIVDPSLLMEVMTNNSMIQEDKRVKTEECLNAIIRTGVLCSM 805 (833)
Q Consensus 726 ~~~~~~Di~s~~~~~~~~~~~g~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 805 (833)
..+.++|+||.|+.++.+|..|..+.....+..........+..- ........+.++.+-+.+++.
T Consensus 185 ~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~--------------~~~~s~~~p~el~~~l~k~l~ 250 (700)
T KOG2137|consen 185 TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAG--------------AFGYSNNLPSELRESLKKLLN 250 (700)
T ss_pred cccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccc--------------cccccccCcHHHHHHHHHHhc
Confidence 899999999999999999988877665433222222111111100 011123456777888888999
Q ss_pred CCCCCCCCHHHHHH
Q 040925 806 ESPFERMDMRDVVA 819 (833)
Q Consensus 806 ~dP~~RPt~~eil~ 819 (833)
.++.-||++.++..
T Consensus 251 ~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 251 GDSAVRPTLDLLLS 264 (700)
T ss_pred CCcccCcchhhhhc
Confidence 99999998777643
No 496
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.61 E-value=5.1e-07 Score=87.00 Aligned_cols=141 Identities=18% Similarity=0.241 Sum_probs=94.8
Q ss_pred hcCCccCceeccCcceEEEEEEECCCceEEEEEEeeccCCcchhH---------HHHHHHHHhhcC---CCccceEeeEe
Q 040925 530 TGEFSSSNMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYKGASRS---------FVAECEALRNIR---HRNLIKIITIC 597 (833)
Q Consensus 530 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l~---h~niv~~~~~~ 597 (833)
.++|.+.+.+-......|.+... +|..+++|..+.......+. ..+++..+.+++ -...+.++.+.
T Consensus 30 ~~~~~~~kv~k~~~r~~ValIei--~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ 107 (229)
T PF06176_consen 30 DNNYKIIKVFKNTKRNYVALIEI--DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA 107 (229)
T ss_pred hCCceEEEeecCCCccEEEEEEE--CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence 46788888888888888888777 56789999987544332222 233444444443 22333333332
Q ss_pred ecCCCCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecC
Q 040925 598 SSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDH 677 (833)
Q Consensus 598 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~ 677 (833)
.-..+.-....+++|||++|..|.++.. +++ .++..+++++.-+|.. |++|+|..|.|+++++
T Consensus 108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~----------i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNFlv~~ 170 (229)
T PF06176_consen 108 EKKIFRYTSSYVLLMEYIEGVELNDIED----------IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNFLVSN 170 (229)
T ss_pred eeeeccceeEEEEEEEEecCeecccchh----------cCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcEEEEC
Confidence 2222223345678999999987776532 222 2445677889999999 9999999999999986
Q ss_pred CCcEEEccccccc
Q 040925 678 DMVAHVCDFGLAK 690 (833)
Q Consensus 678 ~~~~kL~DfG~a~ 690 (833)
++ ++++||+..+
T Consensus 171 ~~-i~iID~~~k~ 182 (229)
T PF06176_consen 171 NG-IRIIDTQGKR 182 (229)
T ss_pred Cc-EEEEECcccc
Confidence 54 9999998765
No 497
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.60 E-value=3.3e-09 Score=103.34 Aligned_cols=205 Identities=18% Similarity=0.166 Sum_probs=95.5
Q ss_pred CCCcEEECCCcccccccC--chhhcCCCCccEEEccCCcceeeCCccccCCCCCcEEEcccCccccccCcC-ccCCCcCc
Q 040925 71 SSLELIQLALNRFSGNLP--FDIVVNLPNLKALAIGGNNFFGSIPYSLSNASNLELLDLSVNQFKGNVSID-FSSLKNLL 147 (833)
Q Consensus 71 ~~L~~L~L~~N~l~~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~-~~~l~~L~ 147 (833)
+.++.|||.+|.|+ ... ..+..++|.|+.|+|+.|.+...+...-..+.+|++|-|.+..+......+ +..++.++
T Consensus 71 ~~v~elDL~~N~iS-dWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vt 149 (418)
T KOG2982|consen 71 TDVKELDLTGNLIS-DWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVT 149 (418)
T ss_pred hhhhhhhcccchhc-cHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhh
Confidence 44555555555554 221 123445566666666666554322221134456666666665554333322 34455555
Q ss_pred eEecccccCCCCCCCCcccccccCCCCCCCEEEccCCcCcccCChhHhhhcccccEEEccCccccccCChhhhcCCCCCe
Q 040925 148 WLNLEQNNLGTGTATDLDFVTFLTNCSSLKALSLADNQFGGELPHSIANLSSTVINFGIGRNQISGTIPPGIRNLVNLIG 227 (833)
Q Consensus 148 ~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~ 227 (833)
.|+++.|++......+-..- ..-+.+++|++..|... +.++-|++. .-++++..
T Consensus 150 elHmS~N~~rq~n~Dd~c~e---~~s~~v~tlh~~~c~~~----------------~w~~~~~l~-------r~Fpnv~s 203 (418)
T KOG2982|consen 150 ELHMSDNSLRQLNLDDNCIE---DWSTEVLTLHQLPCLEQ----------------LWLNKNKLS-------RIFPNVNS 203 (418)
T ss_pred hhhhccchhhhhcccccccc---ccchhhhhhhcCCcHHH----------------HHHHHHhHH-------hhcccchh
Confidence 56555554332211110000 01123333433333221 001111111 22345555
Q ss_pred EeccCCccccc-CCccccCCCCCCEEEcccccCccc-CCccccCCCCCCeEEeecccccCCCCC------CCCCCCccce
Q 040925 228 FGAEENQLHGT-IPDAIGELKNLQKLCLFRNFLQGR-IPSGLGNLTKLANLELSSNSLQGNIPS------SLGNCQNLMS 299 (833)
Q Consensus 228 L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~------~~~~l~~L~~ 299 (833)
+.+..|.+... ....+..++.+-.|+|+.|+|.+- .-+++.++++|..|.+++|.+...... .++.+++++.
T Consensus 204 v~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~~~err~llIaRL~~v~v 283 (418)
T KOG2982|consen 204 VFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPLRGGERRFLLIARLTKVQV 283 (418)
T ss_pred eeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccccccCCcceEEEEeeccceEE
Confidence 55666655432 223455556666777777776532 124566677777777777766533221 2456677776
Q ss_pred eec
Q 040925 300 FTA 302 (833)
Q Consensus 300 L~l 302 (833)
|+=
T Consensus 284 LNG 286 (418)
T KOG2982|consen 284 LNG 286 (418)
T ss_pred ecC
Confidence 653
No 498
>PRK09902 hypothetical protein; Provisional
Probab=98.60 E-value=9.6e-07 Score=84.93 Aligned_cols=144 Identities=18% Similarity=0.139 Sum_probs=104.1
Q ss_pred eeccCcceEEEEEEECCCceEEEEEEeecc------CCcchhHHHHHHHHHhhcCC--CccceEeeEeecCCCCCCceEe
Q 040925 538 MIGQGSFGYVYKGTLGEDEMIVAVKVINLK------YKGASRSFVAECEALRNIRH--RNLIKIITICSSTDFKGTDFKA 609 (833)
Q Consensus 538 ~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~------~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~~~~ 609 (833)
--|+||.+-|++.... |..+-+|.-... .+.....|.+|...+.++.. -.+.+.. ++........-.-+
T Consensus 25 N~~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~ 101 (216)
T PRK09902 25 NYRRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRAL 101 (216)
T ss_pred CcCCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEE
Confidence 3467999999998875 336778876411 12345689999999999953 2244444 32222112233468
Q ss_pred EEEEecCC-CChhhhhccCCCccccccCCHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCCCeeecCCCc--EEEccc
Q 040925 610 FVFEYMEN-GSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMV--AHVCDF 686 (833)
Q Consensus 610 lv~e~~~~-gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kL~Df 686 (833)
+|+|-+++ -||.+++...... +.+......+..+++..++-||+. |+.|+|+.+.||+++.++. ++++||
T Consensus 102 LVTe~L~g~~~L~~~l~~~~~~----~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDl 174 (216)
T PRK09902 102 LVTEDMAGFISIADWYAQHAVS----PYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDL 174 (216)
T ss_pred EEEEeCCCCccHHHHHhcCCcC----CcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEh
Confidence 99998753 4888888654321 467778889999999999999999 9999999999999986666 999999
Q ss_pred ccccc
Q 040925 687 GLAKF 691 (833)
Q Consensus 687 G~a~~ 691 (833)
.-++.
T Consensus 175 Ek~r~ 179 (216)
T PRK09902 175 EKSRR 179 (216)
T ss_pred hccch
Confidence 87653
No 499
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.55 E-value=7.8e-07 Score=86.49 Aligned_cols=156 Identities=21% Similarity=0.229 Sum_probs=107.2
Q ss_pred CccchHHHHHHhcCCccCceec---cCcceEEEEEEECCCceEEEEEEeeccCCc-------------------ch----
Q 040925 519 PMVSYAELSKATGEFSSSNMIG---QGSFGYVYKGTLGEDEMIVAVKVINLKYKG-------------------AS---- 572 (833)
Q Consensus 519 ~~~~~~~~~~~~~~y~~~~~lg---~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-------------------~~---- 572 (833)
-..+...+.....+..+....| .|.-+.||+|... ++..||||+++..... ..
T Consensus 33 D~~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~-~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv 111 (268)
T COG1718 33 DKRTLETLRRLLSRGVITELVGCISTGKEANVYLAETG-DGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLV 111 (268)
T ss_pred hhHHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccC-CCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHH
Confidence 3456667777777777766655 5566689999874 7889999998743211 00
Q ss_pred -hHHHHHHHHHhhcC--CCccceEeeEeecCCCCCCceEeEEEEecCCC-ChhhhhccCCCccccccCCHHHHHHHHHHH
Q 040925 573 -RSFVAECEALRNIR--HRNLIKIITICSSTDFKGTDFKAFVFEYMENG-SLKDWLHQSDDQVEVCKLSLIQRVNIAIDV 648 (833)
Q Consensus 573 -~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~l~~~~~~~i~~qi 648 (833)
.-..+|+.-|.++. +-.+.+-+++. .-.+||||+... .-.-.++.- ++...+...+..++
T Consensus 112 ~~W~~kEf~NL~R~~eAGVrvP~Pi~~~---------~nVLvMEfIg~~g~pAP~LkDv-------~~e~~e~~~~~~~~ 175 (268)
T COG1718 112 FAWARKEFRNLKRAYEAGVRVPEPIAFR---------NNVLVMEFIGDDGLPAPRLKDV-------PLELEEAEGLYEDV 175 (268)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCceeec---------CCeEEEEeccCCCCCCCCcccC-------CcCchhHHHHHHHH
Confidence 11357888888873 45555665542 357999999542 111111111 23333677788889
Q ss_pred HHHHHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccCc
Q 040925 649 ASAMEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSD 694 (833)
Q Consensus 649 ~~gL~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 694 (833)
++++.-|-..+ ++||+||+.=|||+. ++.+.|+|||-|....+
T Consensus 176 v~~~~~l~~~a--~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~h 218 (268)
T COG1718 176 VEYMRRLYKEA--GLVHGDLSEYNILVH-DGEPYIIDVSQAVTIDH 218 (268)
T ss_pred HHHHHHHHHhc--CcccccchhhheEEE-CCeEEEEECccccccCC
Confidence 99998888733 999999999999998 88999999999876554
No 500
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.47 E-value=3.1e-07 Score=101.55 Aligned_cols=141 Identities=20% Similarity=0.261 Sum_probs=93.3
Q ss_pred ceeccCcceEEEEEEECCCceEEEEEEeeccCC----------------------c----c--------------hhHHH
Q 040925 537 NMIGQGSFGYVYKGTLGEDEMIVAVKVINLKYK----------------------G----A--------------SRSFV 576 (833)
Q Consensus 537 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----------------------~----~--------------~~~~~ 576 (833)
+.|+.++-|+||+|+.+ +|+.||||+.++.-. . . .-++.
T Consensus 131 ~PiAsASIaQVH~A~L~-sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVLK-SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEec-CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 68899999999999998 699999999864310 0 0 01245
Q ss_pred HHHHHHhhcC-----CCccceEeeEeecCCCCCCceEeEEEEecCCCChhhhhccCCCccccccCCHHHHHHHHHHHHHH
Q 040925 577 AECEALRNIR-----HRNLIKIITICSSTDFKGTDFKAFVFEYMENGSLKDWLHQSDDQVEVCKLSLIQRVNIAIDVASA 651 (833)
Q Consensus 577 ~E~~~l~~l~-----h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~g 651 (833)
+|+.-+.+++ .|. +++=.++ .+.+....++|||++|-.+.+...-... ..+...+ +..++++
T Consensus 210 ~EA~n~~~~~~nf~~~~~-v~VP~V~----we~t~~~VLtmE~i~Gi~i~d~~~l~~~-----g~d~k~i---a~~~~~~ 276 (517)
T COG0661 210 REAANAERFRENFKDDPD-VYVPKVY----WEYTTRRVLTMEWIDGIKISDIAALKSA-----GIDRKEL---AELLVRA 276 (517)
T ss_pred HHHHHHHHHHHHcCCCCC-eEeceee----hhccCCcEEEEEeeCCEecccHHHHHhc-----CCCHHHH---HHHHHHH
Confidence 6666666662 233 2222232 2223467899999999888887432221 2442222 2222222
Q ss_pred -HHHHhhcCCCCceeeCCCCCCeeecCCCcEEEcccccccccCc
Q 040925 652 -MEYLHHHCQPPMVHGDLKPSNVLLDHDMVAHVCDFGLAKFLSD 694 (833)
Q Consensus 652 -L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 694 (833)
+..+-.. |++|+|..|.||+++.+|.+.+.|||+...+++
T Consensus 277 f~~q~~~d---gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 277 FLRQLLRD---GFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred HHHHHHhc---CccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 2222334 999999999999999999999999999987765
Done!