BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040927
(147 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver
Somniferum
Length = 311
Score = 122 bits (306), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 93/158 (58%), Gaps = 33/158 (20%)
Query: 15 TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDP-ASVDSLVHFVSSQFGKLDIL---GGL 70
T +D +G AVEKLKNS +NV+FH LDVTDP A++ SL F+ + FGKLDIL G+
Sbjct: 42 TCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGV 101
Query: 71 P------DNWYKM-----------------------LTQTYELAEKCIQTNYYGNKRMCE 101
D + M +++TYELAE+C++ NY G K + E
Sbjct: 102 AGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTE 161
Query: 102 ALIPLLQLSDSPRIVNASSSMGKLKNITNEWAKGVLSD 139
LIPLLQLSDSPRIVN SSS G LK ++NE A +L D
Sbjct: 162 VLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGD 199
>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp
pdb|3BHI|A Chain A, Crystal Structure Of Human Carbonyl Reductase 1 In Complex
With Nadp
pdb|3BHJ|A Chain A, Crystal Structure Of Human Carbonyl Reductase 1 In Complex
With Glutathione
pdb|3BHM|A Chain A, Crystal Structure Of Human Carbonyl Reductase 1 In Complex
With S-Hydroxymethylglutathione
Length = 276
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
Query: 15 TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNW 74
T +D RG AAV++L+ G FH LD+ D S+ +L F+ ++G LD+L
Sbjct: 35 TARDVTRGQAAVQQLQAEGLSPR-FHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIA 93
Query: 75 YKMLTQT--YELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122
+K+ T + AE ++TN++G + +C L+PL++ R+VN SS M
Sbjct: 94 FKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQG--RVVNVSSIM 141
>pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase
20beta-Hydroxysteroid Dehydrogenase
Length = 288
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 63/111 (56%), Gaps = 5/111 (4%)
Query: 15 TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNW 74
T +D RG AAV++L+ G + FH LD+ D S+ +L F+ ++G LD+L
Sbjct: 35 TARDVARGQAAVKQLQAEGL-SPRFHQLDIIDLQSIRALCDFLRKEYGGLDVLVNNAAIA 93
Query: 75 YKM--LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
+++ T + AE ++TN+ G + +C L+PL++ R+VN SS+ G
Sbjct: 94 FQLDNPTPFHIQAELTMKTNFMGTRNVCTELLPLIKPQG--RVVNVSSTEG 142
>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2
Length = 276
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
Query: 15 TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNW 74
T +D RG AAV++L+ G + FH LD+ D S+ +L F+ ++G LD+L
Sbjct: 35 TARDVTRGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIA 93
Query: 75 YKMLTQT--YELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122
+K+ T + AE ++TN++G + + L+PL++ R+VN SS M
Sbjct: 94 FKVADPTPFHIQAEVTMKTNFFGTRDVXTELLPLIKPQG--RVVNVSSIM 141
>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed
With Nadp+
Length = 274
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 61/108 (56%), Gaps = 5/108 (4%)
Query: 15 TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNW 74
T +D RG AAV++L+ G + FH LD+ D S+ +L F+ ++G L++L
Sbjct: 33 TARDVARGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRALRDFLRKEYGGLNVLVNNAAVA 91
Query: 75 YKML-TQTYEL-AEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASS 120
+K +++ AE ++TN++ + MC L+P+++ R+VN SS
Sbjct: 92 FKSDDPMPFDIKAEMTLKTNFFATRNMCNELLPIMKPHG--RVVNISS 137
>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|A Chain A, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|D Chain D, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|C Chain C, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|F Chain F, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|E Chain E, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|H Chain H, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
pdb|3TZQ|G Chain G, Crystal Structure Of A Short-Chain Type
DehydrogenaseREDUCTASE FROM Mycobacterium Marinum
Length = 271
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 36 NVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQ-TYELAEKCIQT 91
+ H++D+T+ SV +L+ F FG+LDI+ D ++TQ T ++ +
Sbjct: 58 GAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTV 117
Query: 92 NYYGNKRMCEALIPLLQLSDSPRIVNASSS 121
N G MC+ IP L + IVN SS+
Sbjct: 118 NARGTMLMCKYAIPRLISAGGGAIVNISSA 147
>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant
In Complex With Nadph Fragment
pdb|1Q7C|B Chain B, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant
In Complex With Nadph Fragment
Length = 244
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 41 LLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNWYKMLTQTYELAEKCIQTNYYGN 96
+L+VTDPAS++S++ + ++FG++DIL G DN ++ E I+TN
Sbjct: 57 MLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNL--LMRMKDEEWNDIIETNLSSV 114
Query: 97 KRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127
R+ +A++ + RI+ S +G + N
Sbjct: 115 FRLSKAVMRAMMKKRHGRIITIGSVVGTMGN 145
>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|B Chain B, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|C Chain C, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|D Chain D, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|E Chain E, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|F Chain F, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|G Chain G, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|H Chain H, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1Q7B|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|B Chain B, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|C Chain C, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|D Chain D, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
Length = 244
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 41 LLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNWYKMLTQTYELAEKCIQTNYYGN 96
+L+VTDPAS++S++ + ++FG++DIL G DN ++ E I+TN
Sbjct: 57 MLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNL--LMRMKDEEWNDIIETNLSSV 114
Query: 97 KRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127
R+ +A++ + RI+ S +G + N
Sbjct: 115 FRLSKAVMRAMMKKRHGRIITIGSVVGTMGN 145
>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441)
From Thermotoga Maritima At 2.07 A Resolution
pdb|1VL8|B Chain B, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441)
From Thermotoga Maritima At 2.07 A Resolution
Length = 267
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 25 AVEKL-KNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNWYKMLTQTYE 83
A +KL + G + + F DV++ V L+ V +FGKLD + + + +
Sbjct: 61 AAQKLTEKYGVETMAFRC-DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFP 119
Query: 84 LAE--KCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASS 120
L E + I+ N +G +C LL+ SD+P I+N S
Sbjct: 120 LDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGS 158
>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
Length = 270
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Query: 11 MGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--- 67
+G ATT+ G+ A K +G + +L+V D +VD+LV +FG L++L
Sbjct: 56 IGTATTEAGAEGIGAA--FKQAGLEGR-GAVLNVNDATAVDALVESTLKEFGALNVLVNN 112
Query: 68 GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127
G+ + M + E + I TN R+ A++ + + RIVN +S +G N
Sbjct: 113 AGITQDQLAMRMKDDEW-DAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGN 171
>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From
Staphylococcus Aureus Complex With Nadph
pdb|3SJ7|B Chain B, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From
Staphylococcus Aureus Complex With Nadph
Length = 252
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 9/114 (7%)
Query: 19 EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNW 74
+++ A VE++K G D+ +V D V +++ V SQFG LD+L G DN
Sbjct: 45 KEKAEAVVEEIKAKGVDSFAIQA-NVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL 103
Query: 75 Y-KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127
+M Q + + I TN G + P + S I+N SS +G + N
Sbjct: 104 LMRMKEQEW---DDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGN 154
>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
pdb|3RIH|B Chain B, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
pdb|3RIH|C Chain C, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
pdb|3RIH|D Chain D, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
Length = 293
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 6/104 (5%)
Query: 28 KLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNWYKMLTQTYE 83
+L G NVI LDV+DP S V FG LD++ G P+ ++ T T E
Sbjct: 84 ELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPE--ARLDTMTPE 141
Query: 84 LAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127
+ + N G +A + L S R++ SS G +
Sbjct: 142 QLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTG 185
>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|B Chain B, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|C Chain C, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|D Chain D, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|E Chain E, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|F Chain F, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|G Chain G, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|H Chain H, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|I Chain I, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|J Chain J, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
Length = 281
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 16/93 (17%)
Query: 42 LDVTDPASVDSLVHFVSSQFGKLDIL---------GGLPDNWYKMLTQTYELAEKCIQTN 92
LDVTD +D + V +++G++D+L G + + L +EL +
Sbjct: 58 LDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFEL-------H 110
Query: 93 YYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL 125
+G R+ AL+P + S +VN SS G+L
Sbjct: 111 VFGPARLTRALLPQXRERGSGSVVNISSFGGQL 143
>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
Length = 251
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 35 DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQT 91
DN L+VT+P S+++++ ++ +FG +DIL G+ + M + E ++ ++T
Sbjct: 58 DNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSD-IMET 116
Query: 92 NYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127
N R+ +A++ + RI+N S +G + N
Sbjct: 117 NLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGN 152
>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RSH|B Chain B, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RRO|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|3RRO|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|4I08|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
pdb|4I08|B Chain B, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
Length = 251
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 35 DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQT 91
DN L+VT+P S+++++ ++ +FG +DIL G+ + M + E ++ ++T
Sbjct: 58 DNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSD-IMET 116
Query: 92 NYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127
N R+ +A++ + RI+N S +G + N
Sbjct: 117 NLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGN 152
>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|E Chain E, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|F Chain F, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
Length = 251
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 35 DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQT 91
DN L+VT+P S+++++ ++ +FG +DIL G+ + M + E ++ ++T
Sbjct: 58 DNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSD-IMET 116
Query: 92 NYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127
N R+ +A++ + RI+N S +G + N
Sbjct: 117 NLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGN 152
>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|N Chain N, Architecture Of Mammalian Fatty Acid Synthase
Length = 226
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 24/27 (88%)
Query: 41 LLDVTDPASVDSLVHFVSSQFGKLDIL 67
+L+VTDPAS++S++ + ++FG++DIL
Sbjct: 57 MLNVTDPASIESVLEKIRAEFGEVDIL 83
>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
pdb|3PGX|B Chain B, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
pdb|3PGX|C Chain C, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
pdb|3PGX|D Chain D, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
Length = 280
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 41 LLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNWYKMLTQTYELAEKCIQTNYYGN 96
+LDV D A++ LV QFG+LD++ G L +W ++ T E + I N G
Sbjct: 83 VLDVRDDAALRELVADGMEQFGRLDVVVANAGVL--SWGRVWELTDEQWDTVIGVNLTGT 140
Query: 97 KRMCEALIP-LLQLSDSPRIVNASSSMG 123
R A +P +++ + IV SSS G
Sbjct: 141 WRTLRATVPAMIEAGNGGSIVVVSSSAG 168
>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92d) From Vibrio Cholerae
pdb|3U09|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92d) From Vibrio Cholerae
Length = 251
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 35 DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNWYKMLTQTYELAE--KCIQTN 92
DN L+VT+P S+++++ ++ +FG +DIL D L + E ++TN
Sbjct: 58 DNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNADITRDNLLMRMKEEEWSDIMETN 117
Query: 93 YYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127
R+ +A++ + RI+N S +G + N
Sbjct: 118 LTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGN 152
>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
pdb|3PK0|B Chain B, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
pdb|3PK0|C Chain C, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
pdb|3PK0|D Chain D, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE
SDR FROM Mycobacterium Smegmatis
Length = 262
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 43/108 (39%), Gaps = 6/108 (5%)
Query: 24 AAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNWYKMLT 79
A V L G VI DV+D A D+L +FG +D++ G PD + T
Sbjct: 49 ACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPD--APLAT 106
Query: 80 QTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127
T E N G +A + L S S R+V SS G +
Sbjct: 107 MTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITG 154
>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein
Reductase, Fabg, From Staphylococcus Aureus
pdb|3OSU|B Chain B, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein
Reductase, Fabg, From Staphylococcus Aureus
Length = 246
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Query: 19 EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNW 74
+++ A VE++K G D+ +V D V + + V SQFG LD+L G DN
Sbjct: 39 KEKAEAVVEEIKAKGVDSFAIQA-NVADADEVKAXIKEVVSQFGSLDVLVNNAGITRDN- 96
Query: 75 YKMLTQTYELA-EKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127
+L + E + I TN G + P S I+N SS +G + N
Sbjct: 97 --LLXRXKEQEWDDVIDTNLKGVFNCIQKATPQXLRQRSGAIINLSSVVGAVGN 148
>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
pdb|2CFC|B Chain B, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
pdb|2CFC|C Chain C, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
pdb|2CFC|D Chain D, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
Length = 250
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 34 CDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQT--YELAEKC 88
D V+ DV D V++ + QFG +D+L G+ N + T E +K
Sbjct: 51 ADKVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKV 110
Query: 89 IQTNYYGNKRMCEALIPLLQLSDSPRIVNASS 120
+ N G C A++P + L + IVN +S
Sbjct: 111 MAVNVRGIFLGCRAVLPHMLLQGAGVIVNIAS 142
>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia
Coli
pdb|3ASU|B Chain B, Crystal Structure Of Serine Dehydrogenase From Escherichia
Coli
pdb|3ASV|A Chain A, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|B Chain B, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|C Chain C, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|D Chain D, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|E Chain E, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|F Chain F, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
Length = 248
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 14 ATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGL 70
AT + ++R +++LK+ DN+ LDV + A+++ ++ + +++ +DIL GL
Sbjct: 29 ATGRRQER----LQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGL 84
Query: 71 PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
+ E E I TN G M A++P + + I+N S+ G
Sbjct: 85 ALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAG 137
>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92a) From Vibrio Cholerae
pdb|3TZK|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92a) From Vibrio Cholerae
Length = 251
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 35 DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQT 91
DN L+VT+P S+++++ ++ +FG +DIL + + M + E ++ ++T
Sbjct: 58 DNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAAITRDNLLMRMKEEEWSD-IMET 116
Query: 92 NYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127
N R+ +A++ + RI+N S +G + N
Sbjct: 117 NLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGN 152
>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|B Chain B, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|C Chain C, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|D Chain D, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
Length = 317
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 37 VIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNY 93
+I DV D AS+ ++V ++FG +DIL G+ N ++++ T + +QTN
Sbjct: 109 IIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGI-SNQGEVVSLTDQQWSDILQTNL 167
Query: 94 YGNKRMCEALIP-LLQLSDSPRIVNASSSMG 123
G C A++P +++ ++ SS++G
Sbjct: 168 IGAWHACRAVLPSMIERGQGGSVIFVSSTVG 198
>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181
pdb|3AWD|B Chain B, Crystal Structure Of Gox2181
pdb|3AWD|C Chain C, Crystal Structure Of Gox2181
pdb|3AWD|D Chain D, Crystal Structure Of Gox2181
Length = 260
Score = 33.9 bits (76), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Query: 18 DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW 74
DE AVE L+ G D V ++DVT+ SV + V V Q G++DIL G+ +
Sbjct: 46 DEAMATKAVEDLRMEGHD-VSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISE 104
Query: 75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL 125
K T K + N G R C+A + + L ++ A SM L
Sbjct: 105 VKAEDMTDGQWLKQVDINLNGMFRSCQA-VGRIMLEQKQGVIVAIGSMSGL 154
>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase
pdb|1IY8|B Chain B, Crystal Structure Of Levodione Reductase
pdb|1IY8|C Chain C, Crystal Structure Of Levodione Reductase
pdb|1IY8|D Chain D, Crystal Structure Of Levodione Reductase
pdb|1IY8|E Chain E, Crystal Structure Of Levodione Reductase
pdb|1IY8|F Chain F, Crystal Structure Of Levodione Reductase
pdb|1IY8|G Chain G, Crystal Structure Of Levodione Reductase
pdb|1IY8|H Chain H, Crystal Structure Of Levodione Reductase
Length = 267
Score = 33.9 bits (76), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 53/101 (52%), Gaps = 10/101 (9%)
Query: 37 VIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDN----WYKMLTQTYELAE--KCIQ 90
V+ + DV+D A V++ V + +FG++D G +N + T+++ AE K +
Sbjct: 66 VLTTVADVSDEAQVEAYVTATTERFGRID---GFFNNAGIEGKQNPTESFTAAEFDKVVS 122
Query: 91 TNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNE 131
N G E ++ +++ S +VN ++S+G ++ I N+
Sbjct: 123 INLRGVFLGLEKVLKIMREQGSGMVVN-TASVGGIRGIGNQ 162
>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EW8|B Chain B, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EW8|C Chain C, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EW8|D Chain D, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EWM|A Chain A, Crystal Structure Of The (S)-Specific 1-Phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EWM|B Chain B, Crystal Structure Of The (S)-Specific 1-Phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
Length = 249
Score = 33.5 bits (75), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 43 DVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNWYKMLTQTYELAEKCIQTNYYGNKR 98
DV+ P V++ V S FG+ DIL G P + L T+E +K + N
Sbjct: 62 DVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDEL--TFEQWKKTFEINVDSGFL 119
Query: 99 MCEALIPLLQLSDSPRIVNASSSMGKLK 126
M +A +P ++ + RI+N +S+ LK
Sbjct: 120 MAKAFVPGMKRNGWGRIINLTSTTYWLK 147
>pdb|3OP4|A Chain A, Crystal Structure Of Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio
Cholerae O1 Biovar Eltor Str. N16961 In Complex With
Nadp+
pdb|3OP4|B Chain B, Crystal Structure Of Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio
Cholerae O1 Biovar Eltor Str. N16961 In Complex With
Nadp+
Length = 248
Score = 33.1 bits (74), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 35 DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNWYKMLTQTYELAEKCIQ 90
DN L+VT+P S+++++ ++ +FG +DIL G DN + E +
Sbjct: 55 DNGKGXALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLXRXKE--EEWSDIXE 112
Query: 91 TNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127
TN R+ +A++ RI+N S +G N
Sbjct: 113 TNLTSIFRLSKAVLRGXXKKRQGRIINVGSVVGTXGN 149
>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|B Chain B, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|C Chain C, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|D Chain D, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
Length = 287
Score = 33.1 bits (74), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 25/152 (16%)
Query: 13 EATTKDEKRGLAA-----VEKLKNS---GCDNVIFHL--LDVTDPASVDSLVHFVSSQFG 62
EA+ D K LAA +E+LK + N H+ LD+T + + + +F
Sbjct: 55 EASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFK 114
Query: 63 KLDILGGLPDNWYKML--TQTYELAEKCIQ----TNYYGNKRMCEALIPLLQLSDSPRIV 116
+DIL +N K L + ++A + IQ TN + +A++P+ Q +S IV
Sbjct: 115 DIDIL---VNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIV 171
Query: 117 NASSSMGKLKNIT------NEWAKGVLSDWMR 142
N S G+ T +++A G +D +R
Sbjct: 172 NLGSIAGRDAYPTGSIYCASKFAVGAFTDSLR 203
>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL
Dehydrogenase From Clostridium Thermocellum
Length = 247
Score = 32.7 bits (73), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Query: 24 AAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQ 80
A E+ K +G NV+ DV +P V+++V FG++DIL G+ + ML
Sbjct: 45 ATAEEFKAAGI-NVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTL-MLKM 102
Query: 81 TYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127
+ + + + TN +A+ ++ S +I+N +S G + N
Sbjct: 103 SEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGN 149
>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|B Chain B, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|C Chain C, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|D Chain D, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
Length = 254
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 35 DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQT 91
D + LDVT +V + +FG +D L G+ + + T++ E K ++
Sbjct: 51 DAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMF-LETESVERFRKVVEI 109
Query: 92 NYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
N G + +IP ++ + IVN SS+ G
Sbjct: 110 NLTGVFIGMKTVIPAMKDAGGGSIVNISSAAG 141
>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|B Chain B, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|C Chain C, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|D Chain D, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
Length = 253
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 35 DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQT 91
D + LDVT +V + +FG +D L G+ + + T++ E K ++
Sbjct: 51 DAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMF-LETESVERFRKVVEI 109
Query: 92 NYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
N G + +IP ++ + IVN SS+ G
Sbjct: 110 NLTGVFIGMKTVIPAMKDAGGGSIVNISSAAG 141
>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma
Acidophilum Aldohexose Dehydrogenase (Aldt)
pdb|2ZK7|B Chain B, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma
Acidophilum Aldohexose Dehydrogenase (Aldt)
Length = 257
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 43 DVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRM 99
DVT+P V + + + ++G + +L G+ +++ K+ + + + I N +G
Sbjct: 61 DVTNPDQVKASIDHIFKEYGSISVLVNNAGI-ESYGKIESMSMGEWRRIIDVNLFGYYYA 119
Query: 100 CEALIPLLQLSDSPRIVNASS 120
+ IP + S P IVN SS
Sbjct: 120 SKFAIPYMIRSRDPSIVNISS 140
>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
pdb|2JAP|B Chain B, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
pdb|2JAP|C Chain C, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
pdb|2JAP|D Chain D, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
Length = 247
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 41/94 (43%), Gaps = 10/94 (10%)
Query: 42 LDVTDPASVDSLVHFVSSQFGKLDILGGLPDNWYKMLTQTYELAE-----KCIQTNYYGN 96
LDV D VD+ V G LDI L +N ML E A+ + I TN G
Sbjct: 63 LDVADRQGVDAAVASTVEALGGLDI---LVNNAGIMLLGPVEDADTTDWTRMIDTNLLGL 119
Query: 97 KRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN 130
M A +P L L +V SS G++ N+ N
Sbjct: 120 MYMTRAALPHL-LRSKGTVVQMSSIAGRV-NVRN 151
>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (aldt) In Ligand-free Form
pdb|2DTD|B Chain B, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (aldt) In Ligand-free Form
pdb|2DTE|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With Nadh
pdb|2DTE|B Chain B, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With Nadh
pdb|2DTX|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With D-Mannose
pdb|2DTX|B Chain B, Structure Of Thermoplasma Acidophilum Aldohexose
Dehydrogenase (Aldt) In Complex With D-Mannose
Length = 264
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 43 DVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRM 99
DVT+P V + + + ++G + +L G+ +++ K+ + + + I N +G
Sbjct: 54 DVTNPDQVKASIDHIFKEYGSISVLVNNAGI-ESYGKIESMSMGEWRRIIDVNLFGYYYA 112
Query: 100 CEALIPLLQLSDSPRIVNASS 120
+ IP + S P IVN SS
Sbjct: 113 SKFAIPYMIRSRDPSIVNISS 133
>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From
Mycobacterium Smegmatis
Length = 264
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 43 DVTDPASVDSLVHFVSSQFGKLDILGGLPDNWYKMLTQ------TYELAEKCIQTNYYGN 96
D+TD A V LV +G++D+ + +N +++ + T+E I+ +G
Sbjct: 68 DITDDAQVAHLVDETMKAYGRVDV---VINNAFRVPSMKPFANTTFEHMRDAIELTVFGA 124
Query: 97 KRMCEALIPLLQLSDSPRIVNASS 120
R+ + P L+ S +VN +S
Sbjct: 125 LRLIQGFTPALEESKGA-VVNVNS 147
>pdb|3TFO|A Chain A, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
pdb|3TFO|B Chain B, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
pdb|3TFO|C Chain C, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
pdb|3TFO|D Chain D, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
Length = 264
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 62/146 (42%), Gaps = 33/146 (22%)
Query: 17 KDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLP- 71
+ + R A +++++G + +LDVTD SV + +G++D+L G +P
Sbjct: 36 RRQARIEAIATEIRDAG-GTALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPL 94
Query: 72 --------DNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
D W E+ I N G A++P+++ S +I+N S+G
Sbjct: 95 SPLAAVKVDEW-----------ERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINI-GSIG 142
Query: 124 KLKNI-------TNEWAKGVLSDWMR 142
L + ++A +SD +R
Sbjct: 143 ALSVVPTAAVYCATKFAVRAISDGLR 168
>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of
Caenorhabditis Elegans In The Apo-Form
Length = 278
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Query: 36 NVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL-----GGLPDNWYKMLT-QTYELAEKCI 89
NV + DVT A D ++ +FGKLDIL +PD+ K T Q+ E + +
Sbjct: 59 NVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATL 118
Query: 90 QTNYYGNKRMCEALIPLLQLSDSPRIVNASS 120
N + + +P L S IVN SS
Sbjct: 119 NLNLRSVIALTKKAVPHLS-STKGEIVNISS 148
>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|B Chain B, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|C Chain C, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|D Chain D, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|E Chain E, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|F Chain F, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|G Chain G, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
pdb|3GAF|H Chain H, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid
Dehydrogenase From Brucella Melitensis
Length = 256
Score = 30.8 bits (68), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 43 DVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNWYKMLTQTYELAEKCIQTNYYGNKR 98
+VTD ++++ QFGK+ +L GG + M +E A K N + R
Sbjct: 69 NVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKL---NLFSLFR 125
Query: 99 MCEALIPLLQLSDSPRIVNASSSMGKLKNI 128
+ + P +Q + I+N SS G+ N+
Sbjct: 126 LSQLAAPHMQKAGGGAILNISSMAGENTNV 155
>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
pdb|1XKQ|B Chain B, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
pdb|1XKQ|C Chain C, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
pdb|1XKQ|D Chain D, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
Length = 280
Score = 30.4 bits (67), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 41 LLDVTDPASVDSLVHFVSSQFGKLDIL-----GGLPDNWYKMLT-QTYELAEKCIQTNYY 94
+ DVT D +++ QFGK+D+L +PD + T Q ++ K ++ N
Sbjct: 64 VADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQ 123
Query: 95 GNKRMCEALIPLLQLSDSPRIVNASS 120
M + + P L ++ IVN SS
Sbjct: 124 AVIEMTKKVKPHL-VASKGEIVNVSS 148
>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
pdb|4FN4|B Chain B, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
pdb|4FN4|C Chain C, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
pdb|4FN4|D Chain D, Short-chain Nad(h)-dependent Dehydrogenase/reductase From
Sulfolobus Acidocaldarius
Length = 254
Score = 30.0 bits (66), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Query: 43 DVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRM 99
DV+ V+ V + ++D+L G+ D + + EL E+ + N Y
Sbjct: 64 DVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYS 123
Query: 100 CEALIPLLQLSDSPRIVNASSSMG 123
A+IP++ IVN +S G
Sbjct: 124 SRAVIPIMLKQGKGVIVNTASIAG 147
>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From
Caenorhabditis Elegans With Cofactor And Substrate
pdb|1XHL|B Chain B, Crystal Structure Of Putative Tropinone Reductase-Ii From
Caenorhabditis Elegans With Cofactor And Substrate
Length = 297
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 21/117 (17%)
Query: 41 LLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPDNWYKMLTQTYELAEKCIQTNYYGN 96
+ DVT+ + D +++ ++FGK+DIL G + Q EL +K + N+
Sbjct: 84 VADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNF--- 140
Query: 97 KRMCEALIPLLQ------LSDSPRIVNASSSMGKLKNITN----EWAKGVLSDWMRC 143
+A+I + Q + IVN SS + + + AK L + RC
Sbjct: 141 ----QAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRC 193
>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|B Chain B, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|C Chain C, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|D Chain D, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|E Chain E, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|F Chain F, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|G Chain G, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|H Chain H, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|I Chain I, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|J Chain J, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|K Chain K, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|L Chain L, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|M Chain M, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|N Chain N, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|O Chain O, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|P Chain P, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
Length = 270
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 11/113 (9%)
Query: 17 KDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPD 72
KDE G A ++L + +F L DVT V +LV +FG+LD + G P
Sbjct: 41 KDESGGRALEQELPGA-----VFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPP 95
Query: 73 NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL 125
T + ++ N G + + +P L+ S ++N SS +G +
Sbjct: 96 PQRPEETSAQGF-RQLLELNLLGTYTLTKLALPYLRKSQG-NVINISSLVGAI 146
>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R.
Sphaeroides
pdb|1K2W|B Chain B, Crystal Structure Of Sorbitol Dehydrogenase From R.
Sphaeroides
Length = 256
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 42 LDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKR 98
LDVTD AS+D V + ++G +DIL L D ++ T E ++ N G
Sbjct: 58 LDVTDQASIDRCVAELLDRWGSIDILVNNAALFD-LAPIVEITRESYDRLFAINVSGTLF 116
Query: 99 MCEALI-PLLQLSDSPRIVNASSSMGK 124
M +A+ ++ +I+N +S G+
Sbjct: 117 MMQAVARAMIAGGRGGKIINMASQAGR 143
>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
pdb|3AI3|C Chain C, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
pdb|3AI3|E Chain E, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
pdb|3AI3|G Chain G, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
Length = 263
Score = 29.6 bits (65), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 25 AVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67
A LK V+ +DV P VD++V V S FG DIL
Sbjct: 47 AARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGADIL 89
>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose Reveals The Structure Bases Of Its Catalytic
Mechanism And High Substrate Selectivity
pdb|3AI1|B Chain B, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose Reveals The Structure Bases Of Its Catalytic
Mechanism And High Substrate Selectivity
pdb|3AI2|A Chain A, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|B Chain B, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|H Chain H, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|D Chain D, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|E Chain E, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|C Chain C, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|F Chain F, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|G Chain G, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
Length = 263
Score = 29.6 bits (65), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 25 AVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67
A LK V+ +DV P VD++V V S FG DIL
Sbjct: 47 AARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGADIL 89
>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE
SDR FROM Xanthobacter Autotrophicus Py2
Length = 272
Score = 29.6 bits (65), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 21 RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67
R L A+++ D+ + DVTDP SV +L +FG++D+L
Sbjct: 60 RRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVL 106
>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon
Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp
Length = 235
Score = 29.3 bits (64), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 12/118 (10%)
Query: 25 AVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML-TQ 80
A E ++ G + V +H LDV+ SV+ V +FG +D++ GL ++K L
Sbjct: 43 AHELMQEQGVE-VFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGL--GYFKRLEEL 99
Query: 81 TYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL-----KNITNEWA 133
+ E + I+ N G R +A + L+ + +V S +L ++ +WA
Sbjct: 100 SEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYGGGYVSTKWA 157
>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase
From Hyperthermophilic Archaeon Thermococcus Sibiricus
Complexed With 5- Hydroxy-Nadp
pdb|3TN7|B Chain B, Crystal Structure Of Short-Chain Alcohol Dehydrogenase
From Hyperthermophilic Archaeon Thermococcus Sibiricus
Complexed With 5- Hydroxy-Nadp
Length = 257
Score = 29.3 bits (64), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 12/118 (10%)
Query: 25 AVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML-TQ 80
A E ++ G + V +H LDV+ SV+ V +FG +D++ GL ++K L
Sbjct: 65 AHELMQEQGVE-VFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGL--GYFKRLEEL 121
Query: 81 TYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL-----KNITNEWA 133
+ E + I+ N G R +A + L+ + +V S +L ++ +WA
Sbjct: 122 SEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYGGGYVSTKWA 179
>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase
pdb|2BGK|B Chain B, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase
pdb|2BGL|A Chain A, X-Ray Structure Of Binary-Secoisolariciresinol
Dehydrogenase
pdb|2BGM|A Chain A, X-Ray Structure Of Ternary-Secoisolariciresinol
Dehydrogenase
Length = 278
Score = 29.3 bits (64), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 9/84 (10%)
Query: 31 NSGCDNVI-FHLLDVTDPASVDSLVHFVSSQFGKLDILGG----LPDNWYKMLTQTYELA 85
N G +VI F DVT V +LV ++ GKLDI+ G L Y +L E
Sbjct: 59 NIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDF 118
Query: 86 EKCIQTNYYG----NKRMCEALIP 105
++ + N YG K +IP
Sbjct: 119 KRVMDINVYGAFLVAKHAARVMIP 142
>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|D Chain D, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|A Chain A, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|B Chain B, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|E Chain E, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|F Chain F, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|G Chain G, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|H Chain H, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
Length = 258
Score = 29.3 bits (64), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 28 KLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67
KL + +F LDVTD A+ DS + + + G D+L
Sbjct: 46 KLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGGFDVL 85
>pdb|3LLI|A Chain A, Sulfhydryl Oxidase Fragment Of Human Qsox1
pdb|3LLK|A Chain A, Sulfhydryl Oxidase Fragment Of Human Qsox1
pdb|3LLK|B Chain B, Sulfhydryl Oxidase Fragment Of Human Qsox1
pdb|3LLK|C Chain C, Sulfhydryl Oxidase Fragment Of Human Qsox1
Length = 261
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQF 61
++ N++ YS + D K G +K+ GC H P S+ L HF++ Q
Sbjct: 76 QKRNKIPYSFFKTALDDRKEGAVLAKKVNWIGCQGSEPHFRGF--PCSLWVLFHFLTVQA 133
Query: 62 GKLDI 66
+ ++
Sbjct: 134 ARQNV 138
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 76 KMLTQTYELAEKCIQTNYYGNKRMCE 101
++L T ELA CI T YY + +CE
Sbjct: 173 RVLNSTVELARACIGTPYYLSPEICE 198
>pdb|2D2X|A Chain A, Crystal Structure Of 2-Deoxy-Scyllo-Inosose Synthase
pdb|2D2X|B Chain B, Crystal Structure Of 2-Deoxy-Scyllo-Inosose Synthase
pdb|2GRU|A Chain A, Crystal Structure Of 2-Deoxy-Scyllo-Inosose Synthase
Complexed With Carbaglucose-6-Phosphate, Nad+ And Co2+
pdb|2GRU|B Chain B, Crystal Structure Of 2-Deoxy-Scyllo-Inosose Synthase
Complexed With Carbaglucose-6-Phosphate, Nad+ And Co2+
Length = 368
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 44 VTDPASVDSLVHFVSSQFGKL---DILGGLPDNWYKMLTQTYELAEKCI 89
++D DS+VH+ + FGKL IL YK L+ L E+ I
Sbjct: 40 ISDSGVPDSIVHYAAEYFGKLAPVHILRFQGGEEYKTLSTVTNLQERAI 88
>pdb|4EIT|A Chain A, Crystal Structure Of An Enoyl-(Acyl Carrier Protein)
Reductase From Bartonella Henselae
pdb|4EIT|B Chain B, Crystal Structure Of An Enoyl-(Acyl Carrier Protein)
Reductase From Bartonella Henselae
pdb|4EIT|C Chain C, Crystal Structure Of An Enoyl-(Acyl Carrier Protein)
Reductase From Bartonella Henselae
pdb|4EIT|D Chain D, Crystal Structure Of An Enoyl-(Acyl Carrier Protein)
Reductase From Bartonella Henselae
pdb|4EIT|E Chain E, Crystal Structure Of An Enoyl-(Acyl Carrier Protein)
Reductase From Bartonella Henselae
pdb|4EIT|F Chain F, Crystal Structure Of An Enoyl-(Acyl Carrier Protein)
Reductase From Bartonella Henselae
Length = 276
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 43 DVTDPASVDSLVHFVSSQFGKLDIL 67
DV+D AS+D++ + + ++GKLD L
Sbjct: 72 DVSDSASIDAVFNTIEKKWGKLDFL 96
>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From
Streptococcus Suis Type 2
pdb|3O03|A Chain A, Quaternary Complex Structure Of Gluconate 5-Dehydrogenase
From Streptococcus Suis Type 2
Length = 291
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Query: 21 RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77
RG+AA K +G N ++ DVTD + ++V + S+ G +DIL G+ M
Sbjct: 73 RGMAA---YKAAGI-NAHGYVCDVTDEDGIQAMVAQIESEVGIIDILVNNAGI-IRRVPM 127
Query: 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL 125
+ T + I + + +A+IP + +I+N S M +L
Sbjct: 128 IEMTAAQFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSEL 175
>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
pdb|3I4F|B Chain B, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
pdb|3I4F|C Chain C, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
pdb|3I4F|D Chain D, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
Length = 264
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 7/100 (7%)
Query: 25 AVEKLKNSGCD---NVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--GGLPDNWYKMLT 79
A+E +K + D + F DVT + +V S FGK+D L P + +
Sbjct: 44 AMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKL 103
Query: 80 QTYELAE--KCIQTNYYGNKRMCEALIPLLQLSDSPRIVN 117
YE E + IQ N + + ++P+++ + RI+N
Sbjct: 104 VDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIIN 143
>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|B Chain B, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|C Chain C, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|D Chain D, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|E Chain E, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|F Chain F, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|G Chain G, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|H Chain H, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|B Chain B, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|C Chain C, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|D Chain D, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|B Chain B, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|C Chain C, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|D Chain D, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
Length = 255
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Query: 38 IFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNWYKMLTQTYELA--EKCIQTNYYG 95
+ H D++D A +++L +FG +DIL + + + L +K I N
Sbjct: 54 VHHPADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSA 113
Query: 96 NKRMCEALIPLLQLSDSPRIVNASSSMG 123
+P ++ + RI+N +S G
Sbjct: 114 VFHGTRLALPGMRARNWGRIINIASVHG 141
>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
pdb|3VTZ|B Chain B, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
pdb|3VTZ|C Chain C, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
pdb|3VTZ|D Chain D, Structure Of Thermoplasma Volcanium Aldohexose
Dehydrogenase
Length = 269
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 17/115 (14%)
Query: 22 GLAAVEKLKNSGCD------------NVIFHL-LDVTDPASVDSLVHFVSSQFGKLDIL- 67
GLA V+ L G NV H +DVT+ V V + ++G++DIL
Sbjct: 27 GLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILV 86
Query: 68 --GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASS 120
G+ LT T E+ + I N G+ M + IP++ I+N +S
Sbjct: 87 NNAGIEQYSPLHLTPT-EIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIAS 140
>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein
pdb|3P19|B Chain B, Improved Nadph-Dependent Blue Fluorescent Protein
pdb|3P19|C Chain C, Improved Nadph-Dependent Blue Fluorescent Protein
pdb|3P19|D Chain D, Improved Nadph-Dependent Blue Fluorescent Protein
Length = 266
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
Query: 26 VEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNWYKML-----TQ 80
VE+LK N + +DVTD + D+ + +G D + +N ML TQ
Sbjct: 50 VERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPAD---AIVNNAGMMLLGQIDTQ 106
Query: 81 TYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124
++ N G +A++ ++ + I+N SS GK
Sbjct: 107 EANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGK 150
>pdb|3SJV|E Chain E, Crystal Structure Of The Rl42 Tcr In Complex With
Hla-B8-Flr
pdb|3SJV|J Chain J, Crystal Structure Of The Rl42 Tcr In Complex With
Hla-B8-Flr
pdb|3SJV|O Chain O, Crystal Structure Of The Rl42 Tcr In Complex With
Hla-B8-Flr
pdb|3SJV|T Chain T, Crystal Structure Of The Rl42 Tcr In Complex With
Hla-B8-Flr
pdb|3SKN|B Chain B, Crystal Structure Of The Rl42 Tcr Unliganded
pdb|3SKN|D Chain D, Crystal Structure Of The Rl42 Tcr Unliganded
pdb|3SKN|F Chain F, Crystal Structure Of The Rl42 Tcr Unliganded
pdb|3SKN|H Chain H, Crystal Structure Of The Rl42 Tcr Unliganded
Length = 244
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 7/61 (11%)
Query: 7 VHYSMGEATT-KDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLD 65
+HYS+GE TT K E V +LK LL + A + V+F +S G D
Sbjct: 48 IHYSVGEGTTAKGEVPDGYNVSRLKKQN------FLLGLESAAPSQTSVYFCASGQGNFD 101
Query: 66 I 66
I
Sbjct: 102 I 102
>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate
Dehydrogenase From Sinorhizobium Meliloti
pdb|3V2H|B Chain B, The Crystal Structure Of D-Beta-Hydroxybutyrate
Dehydrogenase From Sinorhizobium Meliloti
Length = 281
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 11/111 (9%)
Query: 15 TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNW 74
T DE GL++ V+ H D T P+ + V+ +FG DIL
Sbjct: 65 TVTDEVAGLSS---------GTVLHHPADXTKPSEIADXXAXVADRFGGADILVNNAGVQ 115
Query: 75 YKMLTQTYELAE--KCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123
+ + + + + + I N + IP + RI+N +S+ G
Sbjct: 116 FVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPXKKKGWGRIINIASAHG 166
>pdb|3GRK|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Reductase
Sdr Glucose-Ribitol Dehydrogenase From Brucella
Melitensis
pdb|3GRK|B Chain B, Crystal Structure Of Short Chain Dehydrogenase Reductase
Sdr Glucose-Ribitol Dehydrogenase From Brucella
Melitensis
pdb|3GRK|C Chain C, Crystal Structure Of Short Chain Dehydrogenase Reductase
Sdr Glucose-Ribitol Dehydrogenase From Brucella
Melitensis
pdb|3GRK|D Chain D, Crystal Structure Of Short Chain Dehydrogenase Reductase
Sdr Glucose-Ribitol Dehydrogenase From Brucella
Melitensis
pdb|3GRK|E Chain E, Crystal Structure Of Short Chain Dehydrogenase Reductase
Sdr Glucose-Ribitol Dehydrogenase From Brucella
Melitensis
pdb|3GRK|F Chain F, Crystal Structure Of Short Chain Dehydrogenase Reductase
Sdr Glucose-Ribitol Dehydrogenase From Brucella
Melitensis
pdb|3GRK|G Chain G, Crystal Structure Of Short Chain Dehydrogenase Reductase
Sdr Glucose-Ribitol Dehydrogenase From Brucella
Melitensis
pdb|3GRK|H Chain H, Crystal Structure Of Short Chain Dehydrogenase Reductase
Sdr Glucose-Ribitol Dehydrogenase From Brucella
Melitensis
Length = 293
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 43 DVTDPASVDSLVHFVSSQFGKLDIL 67
DV D AS+D++ + ++GKLD L
Sbjct: 89 DVADAASIDAVFETLEKKWGKLDFL 113
>pdb|3O3M|B Chain B, (R)-2-Hydroxyisocaproyl-Coa Dehydratase
pdb|3O3M|D Chain D, (R)-2-Hydroxyisocaproyl-Coa Dehydratase
pdb|3O3N|B Chain B, (R)-2-Hydroxyisocaproyl-Coa Dehydratase In Complex With
Its Substrate (R)-2-Hydroxyisocaproyl-Coa
pdb|3O3N|D Chain D, (R)-2-Hydroxyisocaproyl-Coa Dehydratase In Complex With
Its Substrate (R)-2-Hydroxyisocaproyl-Coa
pdb|3O3O|B Chain B, (R)-2-Hydroxyisocaproyl-Coa Dehydratase In Complex With
(R)-2- Hydroxyisocaproate
Length = 385
Score = 26.9 bits (58), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 20 KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVD 51
KRG V+++K D VIF ++ DP D
Sbjct: 300 KRGSLIVDEVKKKDIDGVIFCMMKFCDPEEYD 331
>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
pdb|3UXY|B Chain B, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
pdb|3UXY|C Chain C, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
pdb|3UXY|D Chain D, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
Length = 266
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Query: 43 DVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELA-EKCIQTNYYGNKR 98
D+ + A D L V++ G+LDI+ G+ +T+T + + N R
Sbjct: 74 DLREAAYADGLPGAVAAGLGRLDIVVNNAGVISR--GRITETTDADWSLSLGVNVEAPFR 131
Query: 99 MCEALIPLLQLSDSPRIVNASSSMG 123
+C A IPL + IVN +S G
Sbjct: 132 ICRAAIPLXAAAGGGAIVNVASCWG 156
>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase
Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QIV|B Chain B, Crystal Structure Of A Putative Short-Chain Dehydrogenase
Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
Length = 253
Score = 26.6 bits (57), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Query: 42 LDVTDPASVDSLVHFVSSQFGKLD-------ILGGLPDNWYKMLTQTYELAEKCIQTNYY 94
+DV+DP S ++ ++FG +D I GG+ ++ +LT E +K + N
Sbjct: 65 VDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDF--LLTIDPEYYKKFMSVNLD 122
Query: 95 GNKRMCEALIPLLQLSDSPRIVNASSS 121
G A+ + IVN SS+
Sbjct: 123 GALWCTRAVYKKMTKRGGGAIVNQSST 149
>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Hydroxysteroid Dehydrogenase Like 2 (Hsdl2)
pdb|3KVO|B Chain B, Crystal Structure Of The Catalytic Domain Of Human
Hydroxysteroid Dehydrogenase Like 2 (Hsdl2)
Length = 346
Score = 26.6 bits (57), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 10/98 (10%)
Query: 41 LLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNWYKMLTQTYELAEK----CIQTNYYGN 96
++DV D + + V +FG +DIL + + LT T + K + N G
Sbjct: 107 IVDVRDEQQISAAVEKAIKKFGGIDIL--VNNASAISLTNTLDTPTKRLDLMMNVNTRGT 164
Query: 97 KRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNEWAK 134
+A IP L+ S I+N S + N+ W K
Sbjct: 165 YLASKACIPYLKKSKVAHILNISPPL----NLNPVWFK 198
>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh
And 7-Oxo Glycochenodeoxycholic Acid
pdb|1AHI|B Chain B, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh
And 7-Oxo Glycochenodeoxycholic Acid
pdb|1AHH|A Chain A, 7 Alpha-hydroxysteroid Dehydrogenase Complexed With Nad+
pdb|1AHH|B Chain B, 7 Alpha-hydroxysteroid Dehydrogenase Complexed With Nad+
pdb|1FMC|A Chain A, 7-Alpha-Hydroxysteroid Dehydrogenase Complex With Nadh And
7-Oxo Glycochenodeoxycholic Acid
pdb|1FMC|B Chain B, 7-Alpha-Hydroxysteroid Dehydrogenase Complex With Nadh And
7-Oxo Glycochenodeoxycholic Acid
Length = 255
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 15/94 (15%)
Query: 43 DVTDPASVDSLVHFVSSQFGKLDIL-----GGLP---DNWYKMLTQTYELAEKCIQTNYY 94
D+T + +L F S+ GK+DIL GG P D + YEL N +
Sbjct: 68 DITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYEL-------NVF 120
Query: 95 GNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128
+ + + P ++ + I+ +S + KNI
Sbjct: 121 SFFHLSQLVAPEMEKNGGGVILTITSMAAENKNI 154
>pdb|3CPE|A Chain A, Crystal Structure Of T4 Gp17
Length = 592
Score = 25.8 bits (55), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 124 KLKNITNEWAKGVLSDWMRCRRSI 147
K NI +W + ++ +W +CR I
Sbjct: 119 KRANIKTQWTREMVEEWKKCRDDI 142
>pdb|3EZK|A Chain A, Bacteriophage T4 Gp17 Motor Assembly Based On Crystal
Structures And Cryo-Em Reconstructions
pdb|3EZK|B Chain B, Bacteriophage T4 Gp17 Motor Assembly Based On Crystal
Structures And Cryo-Em Reconstructions
pdb|3EZK|C Chain C, Bacteriophage T4 Gp17 Motor Assembly Based On Crystal
Structures And Cryo-Em Reconstructions
pdb|3EZK|D Chain D, Bacteriophage T4 Gp17 Motor Assembly Based On Crystal
Structures And Cryo-Em Reconstructions
pdb|3EZK|E Chain E, Bacteriophage T4 Gp17 Motor Assembly Based On Crystal
Structures And Cryo-Em Reconstructions
Length = 577
Score = 25.8 bits (55), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 124 KLKNITNEWAKGVLSDWMRCRRSI 147
K NI +W + ++ +W +CR I
Sbjct: 94 KRANIKTQWTREMVEEWKKCRDDI 117
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.132 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,323,813
Number of Sequences: 62578
Number of extensions: 159780
Number of successful extensions: 478
Number of sequences better than 100.0: 87
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 412
Number of HSP's gapped (non-prelim): 92
length of query: 147
length of database: 14,973,337
effective HSP length: 90
effective length of query: 57
effective length of database: 9,341,317
effective search space: 532455069
effective search space used: 532455069
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.7 bits)