Query 040927
Match_columns 147
No_of_seqs 138 out of 1591
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 13:12:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040927.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040927hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG4221 Short-chain alcohol de 100.0 1.9E-29 4.1E-34 168.6 11.5 140 2-147 23-171 (246)
2 KOG1205 Predicted dehydrogenas 100.0 4.7E-29 1E-33 171.8 10.2 144 1-147 28-181 (282)
3 COG0300 DltE Short-chain dehyd 100.0 8.1E-28 1.8E-32 164.5 10.3 144 1-147 22-174 (265)
4 KOG1201 Hydroxysteroid 17-beta 99.9 3.4E-26 7.4E-31 156.8 10.0 142 1-147 54-204 (300)
5 COG3967 DltE Short-chain dehyd 99.9 2.1E-23 4.5E-28 135.9 8.7 140 1-147 21-170 (245)
6 PRK08339 short chain dehydroge 99.9 8.3E-23 1.8E-27 142.0 12.2 143 1-147 24-175 (263)
7 KOG1200 Mitochondrial/plastidi 99.9 4.9E-23 1.1E-27 133.3 9.2 141 2-147 31-182 (256)
8 PRK06139 short chain dehydroge 99.9 2E-22 4.3E-27 144.1 12.0 142 2-147 24-174 (330)
9 PRK08862 short chain dehydroge 99.9 2.5E-22 5.5E-27 136.8 11.5 143 1-146 21-171 (227)
10 KOG1610 Corticosteroid 11-beta 99.9 1.4E-22 3.1E-27 139.8 10.0 141 1-147 45-196 (322)
11 PRK07478 short chain dehydroge 99.9 4E-22 8.6E-27 137.7 11.0 143 1-146 22-174 (254)
12 PRK08415 enoyl-(acyl carrier p 99.9 8E-22 1.7E-26 137.8 11.9 140 1-147 23-175 (274)
13 PRK05876 short chain dehydroge 99.9 1E-21 2.3E-26 137.3 11.7 142 1-146 22-173 (275)
14 PRK07062 short chain dehydroge 99.9 1.7E-21 3.7E-26 135.4 12.7 142 2-146 25-176 (265)
15 PRK07063 short chain dehydroge 99.9 1.1E-21 2.3E-26 136.0 11.6 141 2-146 24-175 (260)
16 PRK08589 short chain dehydroge 99.9 1.2E-21 2.5E-26 136.8 11.0 141 1-146 22-171 (272)
17 PRK06505 enoyl-(acyl carrier p 99.9 1.7E-21 3.8E-26 135.9 11.3 139 1-146 25-176 (271)
18 PF00106 adh_short: short chai 99.9 1.2E-21 2.6E-26 127.4 9.7 138 2-147 17-166 (167)
19 PRK07109 short chain dehydroge 99.9 2.7E-21 5.8E-26 138.6 12.2 141 2-146 25-174 (334)
20 PRK08303 short chain dehydroge 99.9 2.2E-21 4.7E-26 137.5 11.3 142 2-146 25-192 (305)
21 PRK05599 hypothetical protein; 99.9 4.1E-21 8.8E-26 132.3 12.0 141 2-146 17-167 (246)
22 PRK06603 enoyl-(acyl carrier p 99.9 3.3E-21 7.2E-26 133.8 11.5 140 2-147 27-178 (260)
23 PRK06079 enoyl-(acyl carrier p 99.9 2.5E-21 5.5E-26 133.8 10.6 138 1-146 25-174 (252)
24 PRK07791 short chain dehydroge 99.9 3.1E-21 6.7E-26 135.6 11.1 141 2-146 23-187 (286)
25 PRK05867 short chain dehydroge 99.9 2.6E-21 5.7E-26 133.6 10.3 142 1-146 25-178 (253)
26 PRK07370 enoyl-(acyl carrier p 99.9 3.1E-21 6.8E-26 133.8 10.5 142 1-147 24-179 (258)
27 PRK07677 short chain dehydroge 99.9 7.3E-21 1.6E-25 131.4 11.9 141 2-146 18-168 (252)
28 PRK08594 enoyl-(acyl carrier p 99.9 4.9E-21 1.1E-25 132.7 10.9 139 1-146 25-178 (257)
29 KOG0725 Reductases with broad 99.9 1.1E-20 2.3E-25 131.4 12.2 144 1-146 24-181 (270)
30 PRK12481 2-deoxy-D-gluconate 3 99.9 5.1E-21 1.1E-25 132.2 10.2 140 1-146 24-173 (251)
31 PLN00015 protochlorophyllide r 99.9 1.1E-20 2.3E-25 134.2 11.7 124 1-125 13-142 (308)
32 PRK08690 enoyl-(acyl carrier p 99.9 1.2E-20 2.7E-25 131.0 11.6 141 1-146 24-177 (261)
33 PRK08159 enoyl-(acyl carrier p 99.9 1.2E-20 2.7E-25 131.7 11.6 140 1-146 28-179 (272)
34 PRK07533 enoyl-(acyl carrier p 99.8 1.6E-20 3.5E-25 130.2 11.7 139 2-146 29-179 (258)
35 PRK12859 3-ketoacyl-(acyl-carr 99.8 2.1E-20 4.7E-25 129.4 12.2 142 1-146 24-185 (256)
36 PRK05855 short chain dehydroge 99.8 1.1E-20 2.4E-25 143.6 11.3 142 1-146 331-482 (582)
37 PRK06997 enoyl-(acyl carrier p 99.8 1.5E-20 3.2E-25 130.5 10.9 140 1-146 24-176 (260)
38 PRK07984 enoyl-(acyl carrier p 99.8 2.2E-20 4.8E-25 129.8 11.7 140 1-146 24-176 (262)
39 PRK06114 short chain dehydroge 99.8 1.3E-20 2.8E-25 130.3 10.4 125 1-127 24-152 (254)
40 PF13561 adh_short_C2: Enoyl-( 99.8 7.6E-21 1.6E-25 130.5 9.1 139 2-146 13-164 (241)
41 PRK08416 7-alpha-hydroxysteroi 99.8 3.1E-20 6.7E-25 128.8 11.9 143 2-146 25-182 (260)
42 KOG1014 17 beta-hydroxysteroid 99.8 5.5E-21 1.2E-25 131.8 8.0 141 2-147 66-218 (312)
43 PRK07097 gluconate 5-dehydroge 99.8 3.8E-20 8.2E-25 128.7 12.2 141 2-146 27-176 (265)
44 PRK07024 short chain dehydroge 99.8 2.7E-20 5.8E-25 128.9 11.3 141 2-146 19-168 (257)
45 PRK08340 glucose-1-dehydrogena 99.8 3.3E-20 7.1E-25 128.6 11.7 142 1-146 16-168 (259)
46 PRK06172 short chain dehydroge 99.8 4.2E-20 9E-25 127.6 12.0 142 2-146 24-174 (253)
47 PRK07035 short chain dehydroge 99.8 4.6E-20 1E-24 127.3 12.0 143 1-146 24-175 (252)
48 PRK12823 benD 1,6-dihydroxycyc 99.8 3.8E-20 8.1E-25 128.2 11.6 142 1-146 24-172 (260)
49 PRK05872 short chain dehydroge 99.8 3.1E-20 6.8E-25 131.1 11.2 140 1-146 25-173 (296)
50 PRK08277 D-mannonate oxidoredu 99.8 4.9E-20 1.1E-24 128.9 11.3 142 2-146 27-191 (278)
51 PRK07825 short chain dehydroge 99.8 5.9E-20 1.3E-24 128.2 11.6 137 2-146 22-167 (273)
52 PRK06194 hypothetical protein; 99.8 3.8E-20 8.2E-25 129.9 10.6 142 1-146 22-178 (287)
53 PRK06935 2-deoxy-D-gluconate 3 99.8 6.4E-20 1.4E-24 127.0 11.3 141 1-146 31-180 (258)
54 KOG1209 1-Acyl dihydroxyaceton 99.8 8E-21 1.7E-25 124.7 6.3 137 1-147 24-170 (289)
55 PRK07523 gluconate 5-dehydroge 99.8 8.4E-20 1.8E-24 126.2 11.8 126 2-129 27-155 (255)
56 KOG1208 Dehydrogenases with di 99.8 3.9E-20 8.5E-25 130.6 10.1 120 1-123 51-174 (314)
57 PRK08085 gluconate 5-dehydroge 99.8 8.4E-20 1.8E-24 126.2 11.6 125 2-128 26-153 (254)
58 PLN02253 xanthoxin dehydrogena 99.8 5.9E-20 1.3E-24 128.6 10.7 141 2-146 35-185 (280)
59 TIGR01289 LPOR light-dependent 99.8 9.8E-20 2.1E-24 129.6 11.5 122 2-124 20-147 (314)
60 PRK07831 short chain dehydroge 99.8 1.1E-19 2.4E-24 126.1 11.5 142 2-146 35-187 (262)
61 PRK05650 short chain dehydroge 99.8 1.4E-19 3.1E-24 126.1 12.1 141 2-146 17-166 (270)
62 PRK09242 tropinone reductase; 99.8 1.4E-19 3E-24 125.3 11.9 127 2-129 26-156 (257)
63 PLN02730 enoyl-[acyl-carrier-p 99.8 5.2E-20 1.1E-24 130.0 9.9 141 1-146 27-210 (303)
64 PRK06484 short chain dehydroge 99.8 1.2E-19 2.6E-24 136.8 11.7 138 1-146 285-431 (520)
65 PRK07985 oxidoreductase; Provi 99.8 1.3E-19 2.9E-24 127.8 11.0 141 1-146 65-216 (294)
66 PRK06128 oxidoreductase; Provi 99.8 1.6E-19 3.4E-24 127.7 11.2 140 2-146 72-222 (300)
67 PRK08643 acetoin reductase; Va 99.8 3.1E-19 6.7E-24 123.4 12.4 127 1-129 18-148 (256)
68 PRK06398 aldose dehydrogenase; 99.8 6.9E-20 1.5E-24 127.0 9.1 130 2-146 23-161 (258)
69 PRK05866 short chain dehydroge 99.8 1.8E-19 3.8E-24 127.1 11.1 141 2-146 57-209 (293)
70 PRK07890 short chain dehydroge 99.8 2.8E-19 6E-24 123.7 11.9 127 1-129 21-150 (258)
71 PRK05854 short chain dehydroge 99.8 9E-20 2E-24 129.7 9.6 123 1-126 30-156 (313)
72 PRK08278 short chain dehydroge 99.8 2E-19 4.4E-24 125.6 11.2 124 1-126 22-155 (273)
73 PRK06124 gluconate 5-dehydroge 99.8 3.3E-19 7.2E-24 123.3 12.0 126 2-129 28-156 (256)
74 PLN02780 ketoreductase/ oxidor 99.8 9E-20 2E-24 130.0 9.3 143 1-147 69-226 (320)
75 PRK09186 flagellin modificatio 99.8 2.8E-19 6E-24 123.6 11.1 125 1-125 20-150 (256)
76 PRK07889 enoyl-(acyl carrier p 99.8 1.3E-19 2.9E-24 125.5 9.5 137 2-147 26-176 (256)
77 PRK07832 short chain dehydroge 99.8 3.9E-19 8.4E-24 124.1 11.7 126 2-128 17-146 (272)
78 PRK08993 2-deoxy-D-gluconate 3 99.8 2.5E-19 5.4E-24 123.8 10.5 140 1-146 26-175 (253)
79 PRK07454 short chain dehydroge 99.8 4.4E-19 9.6E-24 121.6 11.6 127 1-129 22-151 (241)
80 PRK12384 sorbitol-6-phosphate 99.8 3.4E-19 7.4E-24 123.4 11.1 125 2-127 19-148 (259)
81 PRK06125 short chain dehydroge 99.8 5.2E-19 1.1E-23 122.6 11.9 138 2-146 24-170 (259)
82 PRK06113 7-alpha-hydroxysteroi 99.8 6.5E-19 1.4E-23 121.8 12.1 141 1-146 27-176 (255)
83 PRK06484 short chain dehydroge 99.8 4.9E-19 1.1E-23 133.5 11.9 140 1-146 21-171 (520)
84 PRK08265 short chain dehydroge 99.8 6.1E-19 1.3E-23 122.4 11.4 122 1-129 22-146 (261)
85 PRK07792 fabG 3-ketoacyl-(acyl 99.8 3.6E-19 7.8E-24 126.2 10.2 141 1-146 28-185 (306)
86 PRK07666 fabG 3-ketoacyl-(acyl 99.8 1.1E-18 2.4E-23 119.6 11.9 127 1-129 23-152 (239)
87 PRK07904 short chain dehydroge 99.8 7.1E-19 1.5E-23 121.7 11.0 142 1-146 24-176 (253)
88 PRK05993 short chain dehydroge 99.8 5.6E-19 1.2E-23 123.6 10.6 135 2-146 21-165 (277)
89 PRK06182 short chain dehydroge 99.8 7.1E-19 1.5E-23 122.8 11.0 135 2-146 20-163 (273)
90 PRK08703 short chain dehydroge 99.8 8.9E-19 1.9E-23 120.0 11.2 144 1-146 22-177 (239)
91 PRK06200 2,3-dihydroxy-2,3-dih 99.8 3.4E-19 7.3E-24 123.7 9.2 138 2-146 23-173 (263)
92 PRK12748 3-ketoacyl-(acyl-carr 99.8 1.1E-18 2.4E-23 120.7 11.8 126 1-128 23-162 (256)
93 PRK07774 short chain dehydroge 99.8 9.6E-19 2.1E-23 120.5 11.4 143 1-146 22-172 (250)
94 PRK07576 short chain dehydroge 99.8 1.3E-18 2.7E-23 121.1 11.8 140 2-146 26-174 (264)
95 PRK08063 enoyl-(acyl carrier p 99.8 1.2E-18 2.7E-23 119.9 11.5 125 1-127 20-148 (250)
96 PRK07069 short chain dehydroge 99.8 1.7E-18 3.7E-23 119.2 12.1 127 2-129 16-147 (251)
97 TIGR02415 23BDH acetoin reduct 99.8 1.4E-18 3E-23 119.9 11.6 126 2-129 17-146 (254)
98 PRK06463 fabG 3-ketoacyl-(acyl 99.8 6.2E-19 1.3E-23 121.9 9.7 137 1-146 23-169 (255)
99 PRK12743 oxidoreductase; Provi 99.8 1.7E-18 3.7E-23 119.8 11.9 127 2-130 19-150 (256)
100 PRK07814 short chain dehydroge 99.8 1.9E-18 4.2E-23 120.0 12.0 126 2-129 27-156 (263)
101 PRK12747 short chain dehydroge 99.8 1.1E-18 2.3E-23 120.5 10.6 140 1-146 20-175 (252)
102 PRK08936 glucose-1-dehydrogena 99.8 2.3E-18 5E-23 119.5 12.2 142 1-146 23-175 (261)
103 PRK12938 acetyacetyl-CoA reduc 99.8 1.1E-18 2.5E-23 119.9 10.5 127 1-129 19-149 (246)
104 PRK08267 short chain dehydroge 99.8 1.5E-18 3.3E-23 120.3 10.9 123 1-127 17-143 (260)
105 TIGR01832 kduD 2-deoxy-D-gluco 99.8 1.2E-18 2.5E-23 120.0 10.2 140 1-146 21-170 (248)
106 PRK06180 short chain dehydroge 99.8 3E-18 6.6E-23 119.9 12.0 125 1-130 20-147 (277)
107 PRK06179 short chain dehydroge 99.8 1.1E-18 2.5E-23 121.5 9.8 134 1-146 20-162 (270)
108 PRK06138 short chain dehydroge 99.8 2.4E-18 5.2E-23 118.5 11.3 126 1-129 21-149 (252)
109 PRK06483 dihydromonapterin red 99.8 1.8E-18 3.9E-23 118.3 10.3 136 2-146 19-165 (236)
110 TIGR01500 sepiapter_red sepiap 99.8 3.5E-18 7.6E-23 118.3 11.8 143 2-146 17-181 (256)
111 TIGR01831 fabG_rel 3-oxoacyl-( 99.8 4E-18 8.6E-23 116.7 11.9 128 1-130 14-146 (239)
112 PRK07231 fabG 3-ketoacyl-(acyl 99.8 3.7E-18 8.1E-23 117.5 11.7 127 1-129 21-150 (251)
113 PRK08213 gluconate 5-dehydroge 99.8 4E-18 8.6E-23 118.1 11.8 126 1-128 28-157 (259)
114 PRK09072 short chain dehydroge 99.8 4.2E-18 9.1E-23 118.3 11.8 124 2-129 22-148 (263)
115 PRK10538 malonic semialdehyde 99.8 4.9E-18 1.1E-22 117.0 12.0 124 2-129 17-143 (248)
116 PRK12935 acetoacetyl-CoA reduc 99.8 2.7E-18 6E-23 118.1 10.8 125 1-127 22-150 (247)
117 PRK08251 short chain dehydroge 99.8 5.6E-18 1.2E-22 116.6 12.2 127 1-128 18-148 (248)
118 TIGR03206 benzo_BadH 2-hydroxy 99.8 4.8E-18 1E-22 117.0 11.8 127 1-129 19-148 (250)
119 PRK12939 short chain dehydroge 99.8 4.6E-18 1E-22 117.0 11.5 127 1-129 23-152 (250)
120 TIGR03325 BphB_TodD cis-2,3-di 99.8 1.4E-18 3E-23 120.7 8.9 139 1-146 21-172 (262)
121 PRK06947 glucose-1-dehydrogena 99.8 4.8E-18 1E-22 116.9 11.5 127 1-128 18-151 (248)
122 PRK08263 short chain dehydroge 99.8 4.7E-18 1E-22 118.8 11.4 123 2-129 20-145 (275)
123 PRK05875 short chain dehydroge 99.8 4.3E-18 9.3E-23 118.9 11.1 127 1-127 23-153 (276)
124 PRK08226 short chain dehydroge 99.8 5.1E-18 1.1E-22 117.7 11.5 120 2-124 23-145 (263)
125 PRK12429 3-hydroxybutyrate deh 99.8 5.6E-18 1.2E-22 117.0 11.5 127 1-129 20-149 (258)
126 PRK06123 short chain dehydroge 99.8 5.2E-18 1.1E-22 116.7 11.3 126 2-128 19-151 (248)
127 PRK08945 putative oxoacyl-(acy 99.8 4.6E-18 9.9E-23 117.1 10.7 127 2-128 29-160 (247)
128 PRK07453 protochlorophyllide o 99.8 7.3E-18 1.6E-22 120.3 12.1 121 2-123 23-148 (322)
129 PRK06197 short chain dehydroge 99.8 1E-18 2.3E-23 123.8 7.3 121 1-124 32-156 (306)
130 PRK06701 short chain dehydroge 99.8 7.7E-18 1.7E-22 118.7 11.3 141 1-146 62-212 (290)
131 PRK05717 oxidoreductase; Valid 99.8 8.4E-18 1.8E-22 116.3 11.2 123 1-128 26-152 (255)
132 PRK13394 3-hydroxybutyrate deh 99.8 1.1E-17 2.3E-22 116.0 11.7 124 2-127 24-151 (262)
133 PRK07067 sorbitol dehydrogenas 99.8 7.7E-18 1.7E-22 116.6 10.9 124 1-129 22-149 (257)
134 PRK06940 short chain dehydroge 99.8 7.6E-18 1.7E-22 117.8 10.9 112 2-126 18-132 (275)
135 PRK07201 short chain dehydroge 99.8 9.7E-18 2.1E-22 129.6 12.5 142 1-146 387-539 (657)
136 PRK06949 short chain dehydroge 99.8 1.2E-17 2.6E-22 115.5 11.7 125 2-128 26-161 (258)
137 KOG4169 15-hydroxyprostaglandi 99.8 1.8E-18 3.8E-23 114.7 7.1 128 2-139 22-162 (261)
138 TIGR01829 AcAcCoA_reduct aceto 99.8 1.9E-17 4.2E-22 113.4 12.3 126 2-129 17-146 (242)
139 PRK06914 short chain dehydroge 99.8 1.9E-17 4.2E-22 115.9 12.0 126 2-129 20-149 (280)
140 PRK07102 short chain dehydroge 99.8 1.4E-17 3E-22 114.4 10.9 123 2-128 18-143 (243)
141 PRK07775 short chain dehydroge 99.8 1.8E-17 3.9E-22 115.9 11.5 126 1-128 26-154 (274)
142 PRK09730 putative NAD(P)-bindi 99.8 2.1E-17 4.5E-22 113.5 11.6 127 2-129 18-151 (247)
143 PRK08628 short chain dehydroge 99.8 8.2E-18 1.8E-22 116.4 9.6 122 1-127 23-147 (258)
144 PRK12824 acetoacetyl-CoA reduc 99.8 2.2E-17 4.8E-22 113.3 11.4 126 2-129 19-148 (245)
145 PRK06841 short chain dehydroge 99.7 1.9E-17 4.1E-22 114.4 11.0 123 2-129 32-157 (255)
146 PRK06523 short chain dehydroge 99.7 1.3E-17 2.9E-22 115.5 10.1 117 2-128 26-146 (260)
147 PRK05884 short chain dehydroge 99.7 1.7E-17 3.6E-22 112.9 10.0 131 2-146 17-157 (223)
148 KOG1210 Predicted 3-ketosphing 99.7 1.1E-17 2.3E-22 115.7 9.0 143 2-147 50-203 (331)
149 PRK06196 oxidoreductase; Provi 99.7 7.5E-18 1.6E-22 120.0 8.5 116 1-124 42-160 (315)
150 PRK06198 short chain dehydroge 99.7 3.6E-17 7.8E-22 113.3 11.6 124 2-127 23-151 (260)
151 PRK05693 short chain dehydroge 99.7 3E-17 6.4E-22 114.7 11.2 134 2-146 18-160 (274)
152 PRK06482 short chain dehydroge 99.7 3.7E-17 8E-22 114.3 11.3 123 1-128 18-143 (276)
153 PRK09134 short chain dehydroge 99.7 5.2E-17 1.1E-21 112.5 11.9 125 2-128 26-154 (258)
154 PRK07856 short chain dehydroge 99.7 3.3E-17 7.2E-22 113.1 10.6 128 2-139 23-160 (252)
155 PRK12745 3-ketoacyl-(acyl-carr 99.7 4E-17 8.8E-22 112.8 10.8 126 1-127 18-154 (256)
156 PRK12744 short chain dehydroge 99.7 4.6E-17 1E-21 112.7 11.1 140 1-146 24-176 (257)
157 PRK06171 sorbitol-6-phosphate 99.7 2.2E-17 4.7E-22 114.8 9.2 133 2-146 26-175 (266)
158 PRK06181 short chain dehydroge 99.7 8.6E-17 1.9E-21 111.6 12.0 125 2-129 18-146 (263)
159 PRK12937 short chain dehydroge 99.7 8.8E-17 1.9E-21 110.3 11.8 125 1-129 21-149 (245)
160 PRK06300 enoyl-(acyl carrier p 99.7 4.9E-18 1.1E-22 119.9 5.7 95 48-146 104-209 (299)
161 PRK06500 short chain dehydroge 99.7 6.3E-17 1.4E-21 111.3 11.1 121 2-129 23-146 (249)
162 PRK08220 2,3-dihydroxybenzoate 99.7 4E-17 8.7E-22 112.5 10.0 132 2-146 25-165 (252)
163 TIGR02685 pter_reduc_Leis pter 99.7 4.3E-17 9.3E-22 113.5 9.4 143 1-146 17-190 (267)
164 PRK12826 3-ketoacyl-(acyl-carr 99.7 1.2E-16 2.6E-21 110.0 11.4 124 2-127 23-150 (251)
165 PRK12936 3-ketoacyl-(acyl-carr 99.7 9.3E-17 2E-21 110.2 10.7 123 2-129 23-148 (245)
166 PRK06057 short chain dehydroge 99.7 1E-16 2.2E-21 110.9 10.8 120 2-127 24-147 (255)
167 PRK07074 short chain dehydroge 99.7 1.2E-16 2.6E-21 110.5 11.1 119 2-124 19-140 (257)
168 TIGR01963 PHB_DH 3-hydroxybuty 99.7 1.7E-16 3.7E-21 109.5 11.8 126 1-128 17-145 (255)
169 PRK05565 fabG 3-ketoacyl-(acyl 99.7 1.4E-16 3E-21 109.4 11.3 126 2-129 22-151 (247)
170 PRK07326 short chain dehydroge 99.7 1.7E-16 3.7E-21 108.5 11.2 123 2-128 23-148 (237)
171 PRK05653 fabG 3-ketoacyl-(acyl 99.7 1.8E-16 4E-21 108.6 11.4 125 2-128 22-149 (246)
172 PRK12746 short chain dehydroge 99.7 1.5E-16 3.3E-21 109.8 10.9 124 1-128 22-155 (254)
173 TIGR02632 RhaD_aldol-ADH rhamn 99.7 2.1E-16 4.6E-21 122.3 12.1 127 2-129 431-562 (676)
174 TIGR01830 3oxo_ACP_reduc 3-oxo 99.7 3.9E-16 8.5E-21 106.6 12.0 127 1-129 14-144 (239)
175 PRK08217 fabG 3-ketoacyl-(acyl 99.7 2.7E-16 5.8E-21 108.3 10.9 120 2-122 22-153 (253)
176 KOG1611 Predicted short chain- 99.7 3.1E-16 6.8E-21 104.0 9.7 121 6-127 25-162 (249)
177 PRK08324 short chain dehydroge 99.7 5.7E-16 1.2E-20 120.2 12.2 125 2-129 439-567 (681)
178 PRK06924 short chain dehydroge 99.7 3.7E-16 8E-21 107.7 10.0 126 1-130 17-151 (251)
179 PRK12827 short chain dehydroge 99.7 1E-15 2.2E-20 105.2 11.6 127 1-129 22-156 (249)
180 PRK08261 fabG 3-ketoacyl-(acyl 99.7 6.6E-16 1.4E-20 114.8 11.1 122 2-130 227-353 (450)
181 PRK08642 fabG 3-ketoacyl-(acyl 99.7 8.8E-16 1.9E-20 105.9 10.9 139 2-146 22-176 (253)
182 PRK12828 short chain dehydroge 99.7 8.9E-16 1.9E-20 104.8 10.8 123 2-128 24-149 (239)
183 PRK06101 short chain dehydroge 99.7 4.4E-16 9.6E-21 106.9 9.1 132 1-145 17-157 (240)
184 COG1028 FabG Dehydrogenases wi 99.7 1.4E-15 3E-20 104.9 11.4 138 2-146 22-173 (251)
185 KOG1207 Diacetyl reductase/L-x 99.7 3.4E-17 7.4E-22 104.7 3.0 134 2-146 24-167 (245)
186 PRK06077 fabG 3-ketoacyl-(acyl 99.7 1.9E-15 4.2E-20 104.1 12.0 125 2-130 23-151 (252)
187 PRK07023 short chain dehydroge 99.7 5.8E-16 1.3E-20 106.4 9.2 124 1-130 17-147 (243)
188 PRK12829 short chain dehydroge 99.7 1.6E-15 3.5E-20 105.1 11.5 125 2-129 28-156 (264)
189 PRK07041 short chain dehydroge 99.7 1.3E-15 2.9E-20 103.7 10.7 133 1-146 13-154 (230)
190 PRK05557 fabG 3-ketoacyl-(acyl 99.7 3E-15 6.5E-20 102.7 11.8 125 2-128 22-150 (248)
191 PRK09291 short chain dehydroge 99.6 2.2E-15 4.7E-20 104.2 10.7 119 2-128 19-140 (257)
192 PRK09135 pteridine reductase; 99.6 6.1E-15 1.3E-19 101.3 11.4 126 1-128 22-151 (249)
193 PRK12825 fabG 3-ketoacyl-(acyl 99.6 8E-15 1.7E-19 100.6 12.0 125 2-128 23-151 (249)
194 PRK06550 fabG 3-ketoacyl-(acyl 99.6 9.9E-16 2.1E-20 104.6 7.3 127 2-146 22-157 (235)
195 PRK07577 short chain dehydroge 99.6 6.4E-15 1.4E-19 100.5 8.6 107 2-122 20-129 (234)
196 PRK07578 short chain dehydroge 99.6 8E-15 1.7E-19 97.9 8.8 99 39-146 35-142 (199)
197 PF08659 KR: KR domain; Inter 99.6 3.6E-15 7.8E-20 98.4 6.5 125 2-132 17-148 (181)
198 PRK08017 oxidoreductase; Provi 99.6 2.8E-14 6.2E-19 98.5 11.0 119 2-128 19-141 (256)
199 PRK07060 short chain dehydroge 99.6 2.1E-14 4.6E-19 98.6 10.1 116 2-128 26-145 (245)
200 PRK08177 short chain dehydroge 99.6 1E-14 2.2E-19 99.2 8.3 116 2-126 18-137 (225)
201 PRK08264 short chain dehydroge 99.6 2.2E-14 4.7E-19 98.2 9.8 116 2-129 23-142 (238)
202 PRK05786 fabG 3-ketoacyl-(acyl 99.6 7.8E-14 1.7E-18 95.4 11.8 117 2-125 22-141 (238)
203 PRK06953 short chain dehydroge 99.6 4.4E-14 9.4E-19 95.9 10.3 115 2-126 18-136 (222)
204 COG0623 FabI Enoyl-[acyl-carri 99.6 5.8E-14 1.3E-18 93.5 10.3 127 1-131 24-156 (259)
205 PRK09009 C factor cell-cell si 99.6 2.3E-14 5.1E-19 97.9 8.8 130 2-146 17-165 (235)
206 PRK12742 oxidoreductase; Provi 99.6 6E-14 1.3E-18 95.9 10.7 110 2-124 23-136 (237)
207 KOG1199 Short-chain alcohol de 99.5 6E-15 1.3E-19 94.5 4.5 123 3-129 27-163 (260)
208 PRK07806 short chain dehydroge 99.5 1.2E-14 2.5E-19 100.1 6.0 112 2-123 23-138 (248)
209 PRK12428 3-alpha-hydroxysteroi 99.5 9.4E-15 2E-19 100.4 5.0 98 1-124 1-101 (241)
210 PRK06720 hypothetical protein; 99.5 2.1E-13 4.6E-18 88.9 10.8 118 2-123 33-160 (169)
211 TIGR02813 omega_3_PfaA polyket 99.5 8.4E-14 1.8E-18 118.7 11.1 100 25-131 2085-2187(2582)
212 smart00822 PKS_KR This enzymat 99.5 1.9E-13 4.1E-18 89.0 8.6 121 2-128 17-144 (180)
213 KOG1478 3-keto sterol reductas 99.5 9.1E-13 2E-17 89.2 9.9 117 10-126 33-181 (341)
214 PRK12367 short chain dehydroge 99.4 6.7E-13 1.4E-17 91.5 8.5 108 2-126 31-144 (245)
215 PRK08219 short chain dehydroge 99.4 3.6E-12 7.7E-17 86.5 9.4 116 2-129 20-138 (227)
216 PRK07424 bifunctional sterol d 99.3 2.9E-11 6.4E-16 88.6 11.1 104 2-120 195-305 (406)
217 KOG1204 Predicted dehydrogenas 99.2 6.1E-10 1.3E-14 74.5 9.7 92 38-129 57-154 (253)
218 PF08643 DUF1776: Fungal famil 99.1 6.3E-10 1.4E-14 78.0 9.0 140 2-147 21-186 (299)
219 PLN02989 cinnamyl-alcohol dehy 99.0 5E-09 1.1E-13 75.0 8.5 109 1-124 21-133 (325)
220 PLN03209 translocon at the inn 98.8 4E-08 8.7E-13 74.6 10.0 105 2-124 97-212 (576)
221 PRK13656 trans-2-enoyl-CoA red 98.8 1.4E-07 3E-12 68.5 11.4 125 2-130 60-235 (398)
222 PLN02896 cinnamyl-alcohol dehy 98.7 1.3E-07 2.8E-12 68.5 9.6 112 1-124 26-142 (353)
223 TIGR02622 CDP_4_6_dhtase CDP-g 98.7 1.2E-07 2.7E-12 68.5 8.9 107 1-122 20-129 (349)
224 TIGR03589 PseB UDP-N-acetylglu 98.7 2.4E-07 5.1E-12 66.5 9.7 106 2-126 21-131 (324)
225 PLN02583 cinnamoyl-CoA reducta 98.7 1.6E-07 3.4E-12 66.6 8.7 105 2-124 23-132 (297)
226 PLN02653 GDP-mannose 4,6-dehyd 98.5 5E-07 1.1E-11 65.1 7.8 110 1-121 22-140 (340)
227 PLN02214 cinnamoyl-CoA reducta 98.5 1.4E-06 3E-11 63.0 8.7 101 2-124 27-131 (342)
228 PRK10217 dTDP-glucose 4,6-dehy 98.5 1.1E-06 2.4E-11 63.7 8.0 109 1-122 17-136 (355)
229 TIGR01472 gmd GDP-mannose 4,6- 98.4 1.4E-06 2.9E-11 63.0 8.0 111 1-122 16-134 (343)
230 PLN02986 cinnamyl-alcohol dehy 98.4 1.8E-06 4E-11 61.7 8.4 106 2-123 22-131 (322)
231 PRK10675 UDP-galactose-4-epime 98.4 2.2E-06 4.9E-11 61.6 8.6 107 2-122 17-126 (338)
232 PF02719 Polysacc_synt_2: Poly 98.4 9.2E-07 2E-11 62.1 6.2 114 1-127 14-135 (293)
233 PLN02572 UDP-sulfoquinovose sy 98.4 4.1E-06 9E-11 62.6 9.4 112 1-122 63-193 (442)
234 PLN02650 dihydroflavonol-4-red 98.4 3.9E-06 8.5E-11 60.8 8.9 107 1-123 21-131 (351)
235 PLN00198 anthocyanidin reducta 98.3 4.8E-06 1E-10 60.0 8.8 106 1-124 25-135 (338)
236 KOG1502 Flavonol reductase/cin 98.3 4.2E-06 9.1E-11 59.6 7.6 110 2-127 23-136 (327)
237 PRK08309 short chain dehydroge 98.3 3.1E-06 6.7E-11 55.7 6.5 64 2-67 16-79 (177)
238 PLN02240 UDP-glucose 4-epimera 98.3 6.4E-06 1.4E-10 59.6 8.4 106 2-122 22-134 (352)
239 COG1086 Predicted nucleoside-d 98.2 9.7E-06 2.1E-10 61.3 8.7 116 2-130 267-386 (588)
240 TIGR02114 coaB_strep phosphopa 98.2 1.9E-06 4.1E-11 58.9 3.9 84 1-101 31-117 (227)
241 PLN02662 cinnamyl-alcohol dehy 98.1 1.9E-05 4.2E-10 56.4 8.3 106 1-122 20-129 (322)
242 TIGR01179 galE UDP-glucose-4-e 98.1 1.5E-05 3.3E-10 56.7 7.7 105 2-122 16-123 (328)
243 PRK10084 dTDP-glucose 4,6 dehy 98.1 1.9E-05 4.1E-10 57.2 7.7 108 2-122 17-135 (352)
244 COG1087 GalE UDP-glucose 4-epi 98.1 2.1E-05 4.7E-10 55.2 7.2 107 2-129 17-126 (329)
245 TIGR01181 dTDP_gluc_dehyt dTDP 98.1 3E-05 6.6E-10 55.0 8.3 106 2-122 16-127 (317)
246 TIGR03466 HpnA hopanoid-associ 98.0 1.6E-05 3.5E-10 56.7 5.6 98 2-124 17-117 (328)
247 PLN02657 3,8-divinyl protochlo 97.9 7.1E-05 1.5E-09 55.2 8.1 105 2-124 77-186 (390)
248 PF01073 3Beta_HSD: 3-beta hyd 97.9 4.4E-05 9.5E-10 53.9 6.6 104 2-126 14-122 (280)
249 PRK15181 Vi polysaccharide bio 97.9 0.0001 2.2E-09 53.5 8.3 106 1-122 31-143 (348)
250 PF01370 Epimerase: NAD depend 97.9 0.00014 3.1E-09 49.4 8.5 102 1-122 14-118 (236)
251 KOG1371 UDP-glucose 4-epimeras 97.8 0.00015 3.2E-09 51.6 7.2 104 3-122 20-130 (343)
252 PLN00141 Tic62-NAD(P)-related 97.8 9.6E-05 2.1E-09 51.1 6.3 97 2-122 34-134 (251)
253 PLN02427 UDP-apiose/xylose syn 97.6 0.00029 6.3E-09 51.8 7.5 104 2-122 31-138 (386)
254 PF13460 NAD_binding_10: NADH( 97.5 0.0013 2.9E-08 43.1 8.5 86 2-125 15-103 (183)
255 PLN02686 cinnamoyl-CoA reducta 97.4 0.0011 2.3E-08 48.7 7.9 106 1-122 69-182 (367)
256 CHL00194 ycf39 Ycf39; Provisio 97.3 0.0012 2.5E-08 47.4 6.5 93 2-122 17-112 (317)
257 TIGR01214 rmlD dTDP-4-dehydror 97.3 0.0011 2.3E-08 46.6 6.3 95 12-122 2-102 (287)
258 PF04321 RmlD_sub_bind: RmlD s 97.2 0.0041 8.9E-08 44.0 8.4 98 11-124 2-105 (286)
259 TIGR01746 Thioester-redct thio 97.1 0.0072 1.6E-07 43.7 9.6 107 2-124 16-140 (367)
260 TIGR02197 heptose_epim ADP-L-g 97.1 0.0022 4.8E-08 45.5 6.8 98 2-122 15-116 (314)
261 PRK05865 hypothetical protein; 97.1 0.002 4.4E-08 51.9 7.1 86 2-122 17-105 (854)
262 PRK11908 NAD-dependent epimera 97.0 0.0027 5.8E-08 46.0 6.4 98 2-122 18-120 (347)
263 PLN02260 probable rhamnose bio 96.9 0.0088 1.9E-07 47.3 8.8 105 2-122 23-134 (668)
264 COG1091 RfbD dTDP-4-dehydrorha 96.9 0.018 4E-07 40.6 9.4 97 11-124 2-104 (281)
265 COG0451 WcaG Nucleoside-diphos 96.9 0.003 6.5E-08 44.8 5.5 99 2-122 17-118 (314)
266 PRK11150 rfaD ADP-L-glycero-D- 96.8 0.0019 4.1E-08 45.9 4.2 99 1-122 15-118 (308)
267 PRK08125 bifunctional UDP-gluc 96.7 0.0052 1.1E-07 48.5 6.0 98 2-122 332-434 (660)
268 PRK09987 dTDP-4-dehydrorhamnos 96.6 0.046 1E-06 38.9 10.0 95 11-122 2-106 (299)
269 PF07993 NAD_binding_4: Male s 96.6 0.012 2.7E-07 40.7 6.7 102 4-120 15-135 (249)
270 PLN02695 GDP-D-mannose-3',5'-e 96.5 0.016 3.5E-07 42.5 7.1 99 2-122 38-139 (370)
271 PLN02725 GDP-4-keto-6-deoxyman 96.4 0.011 2.5E-07 41.7 5.8 69 41-122 32-103 (306)
272 COG1088 RfbB dTDP-D-glucose 4, 96.3 0.028 6.1E-07 40.0 7.2 72 36-120 52-126 (340)
273 PLN02260 probable rhamnose bio 96.3 0.099 2.1E-06 41.5 10.9 100 9-121 380-482 (668)
274 PRK06732 phosphopantothenate-- 96.2 0.012 2.7E-07 40.4 4.9 82 1-96 32-116 (229)
275 PLN02778 3,5-epimerase/4-reduc 96.2 0.17 3.6E-06 36.1 10.8 90 9-106 9-101 (298)
276 PRK07201 short chain dehydroge 96.2 0.041 8.8E-07 43.4 8.2 105 2-123 17-128 (657)
277 PLN02206 UDP-glucuronate decar 96.1 0.03 6.4E-07 42.3 6.9 33 86-123 204-236 (442)
278 PLN02166 dTDP-glucose 4,6-dehy 95.8 0.046 1E-06 41.2 6.8 32 86-122 205-236 (436)
279 KOG1202 Animal-type fatty acid 95.3 0.036 7.7E-07 46.5 4.9 125 1-130 1784-1915(2376)
280 PF03808 Glyco_tran_WecB: Glyc 95.2 0.15 3.3E-06 33.4 6.8 67 4-73 43-112 (172)
281 KOG2733 Uncharacterized membra 95.2 0.072 1.6E-06 38.9 5.5 52 6-57 30-84 (423)
282 TIGR03649 ergot_EASG ergot alk 95.1 0.065 1.4E-06 37.7 5.2 55 2-67 16-71 (285)
283 cd01078 NAD_bind_H4MPT_DH NADP 94.6 0.079 1.7E-06 35.3 4.4 57 2-67 45-101 (194)
284 KOG2865 NADH:ubiquinone oxidor 94.5 0.091 2E-06 37.4 4.6 104 2-124 78-181 (391)
285 KOG1430 C-3 sterol dehydrogena 94.4 0.52 1.1E-05 34.7 8.4 74 36-126 56-132 (361)
286 PRK12548 shikimate 5-dehydroge 93.6 0.086 1.9E-06 37.5 3.2 58 2-67 142-203 (289)
287 COG1089 Gmd GDP-D-mannose dehy 93.2 0.066 1.4E-06 38.0 2.0 106 1-120 18-131 (345)
288 PRK12320 hypothetical protein; 93.1 0.58 1.2E-05 37.6 7.3 86 2-123 17-105 (699)
289 TIGR00696 wecB_tagA_cpsF bacte 92.9 0.79 1.7E-05 30.3 6.7 66 5-73 44-111 (177)
290 COG1922 WecG Teichoic acid bio 92.5 0.93 2E-05 31.7 6.8 65 5-73 104-172 (253)
291 COG1748 LYS9 Saccharopine dehy 92.2 0.24 5.3E-06 36.7 3.9 51 2-56 17-68 (389)
292 PF02310 B12-binding: B12 bind 92.0 1.1 2.4E-05 27.1 6.2 67 3-71 22-90 (121)
293 PRK03692 putative UDP-N-acetyl 91.9 1 2.2E-05 31.3 6.6 66 6-73 102-168 (243)
294 COG0569 TrkA K+ transport syst 91.8 0.21 4.5E-06 34.3 3.1 47 1-53 15-62 (225)
295 PF03435 Saccharop_dh: Sacchar 91.5 0.26 5.5E-06 36.5 3.5 51 2-55 14-66 (386)
296 PLN02503 fatty acyl-CoA reduct 91.5 2.5 5.3E-05 33.6 8.9 73 36-122 193-270 (605)
297 PLN00016 RNA-binding protein; 91.5 0.6 1.3E-05 34.4 5.4 43 1-46 72-121 (378)
298 PLN02996 fatty acyl-CoA reduct 90.4 5.6 0.00012 30.7 9.8 69 36-122 85-163 (491)
299 cd06533 Glyco_transf_WecG_TagA 90.1 2 4.4E-05 28.1 6.4 65 5-73 42-110 (171)
300 TIGR01777 yfcH conserved hypot 89.6 1.2 2.6E-05 31.2 5.4 82 2-105 15-99 (292)
301 PF02254 TrkA_N: TrkA-N domain 89.4 0.43 9.4E-06 28.7 2.7 45 2-53 14-58 (116)
302 PRK05579 bifunctional phosphop 89.4 0.4 8.6E-06 35.9 2.9 55 2-71 221-278 (399)
303 PF03848 TehB: Tellurite resis 89.4 0.77 1.7E-05 30.8 4.0 44 3-47 46-89 (192)
304 TIGR03443 alpha_am_amid L-amin 88.1 3.1 6.7E-05 36.1 7.7 105 4-123 990-1112(1389)
305 PF04131 NanE: Putative N-acet 87.4 2.3 5E-05 28.4 5.2 55 3-67 58-116 (192)
306 PF05368 NmrA: NmrA-like famil 87.4 0.73 1.6E-05 31.4 3.1 48 3-55 16-63 (233)
307 cd02067 B12-binding B12 bindin 86.7 3.6 7.8E-05 24.9 5.6 67 3-71 21-90 (119)
308 TIGR02813 omega_3_PfaA polyket 86.6 12 0.00026 35.1 10.4 133 9-147 1755-1925(2582)
309 PRK04148 hypothetical protein; 86.3 0.76 1.7E-05 28.9 2.4 39 3-48 33-71 (134)
310 PRK14968 putative methyltransf 86.1 7 0.00015 25.4 7.1 43 4-46 40-84 (188)
311 PRK10669 putative cation:proto 82.4 1.3 2.8E-05 34.6 2.7 44 2-52 433-476 (558)
312 COG3320 Putative dehydrogenase 82.1 5.3 0.00012 29.7 5.5 105 5-124 21-139 (382)
313 KOG1431 GDP-L-fucose synthetas 80.0 8.2 0.00018 26.9 5.5 80 10-93 2-88 (315)
314 PF01488 Shikimate_DH: Shikima 80.0 2.4 5.2E-05 26.5 2.9 27 3-29 29-56 (135)
315 cd02070 corrinoid_protein_B12- 79.0 9.1 0.0002 25.7 5.6 62 4-67 105-169 (201)
316 TIGR03840 TMPT_Se_Te thiopurin 77.6 2.9 6.4E-05 28.4 2.9 46 3-48 50-107 (213)
317 PRK14106 murD UDP-N-acetylmura 77.6 3.9 8.5E-05 30.9 3.9 42 2-46 21-63 (450)
318 PRK07807 inosine 5-monophospha 77.5 14 0.0003 28.6 6.7 61 3-70 233-297 (479)
319 COG0702 Predicted nucleoside-d 77.2 3.3 7.1E-05 28.6 3.2 46 2-55 17-62 (275)
320 COG1023 Gnd Predicted 6-phosph 76.6 14 0.00029 26.1 5.8 65 1-67 15-90 (300)
321 KOG1203 Predicted dehydrogenas 76.0 5.5 0.00012 30.0 4.1 114 2-130 96-211 (411)
322 COG0144 Sun tRNA and rRNA cyto 75.9 29 0.00064 25.7 8.6 104 5-121 178-290 (355)
323 PRK03562 glutathione-regulated 75.7 8.7 0.00019 30.7 5.4 66 2-67 416-495 (621)
324 TIGR00521 coaBC_dfp phosphopan 75.1 3.5 7.5E-05 30.9 2.9 55 2-71 218-276 (390)
325 PRK03659 glutathione-regulated 74.7 9.2 0.0002 30.4 5.3 66 2-67 416-495 (601)
326 PF03446 NAD_binding_2: NAD bi 74.6 3.5 7.7E-05 26.6 2.6 61 1-61 16-84 (163)
327 COG3010 NanE Putative N-acetyl 74.4 23 0.00051 24.2 6.3 60 3-72 92-160 (229)
328 cd02071 MM_CoA_mut_B12_BD meth 74.4 11 0.00025 23.0 4.7 56 3-60 21-77 (122)
329 PRK09287 6-phosphogluconate de 72.9 8.4 0.00018 29.6 4.6 67 1-67 5-85 (459)
330 PRK06849 hypothetical protein; 72.7 12 0.00026 27.8 5.3 61 1-67 20-80 (389)
331 PRK11207 tellurite resistance 72.5 6.3 0.00014 26.3 3.5 43 3-45 46-88 (197)
332 PRK09496 trkA potassium transp 72.1 5.1 0.00011 30.2 3.3 25 2-26 16-40 (453)
333 PRK08261 fabG 3-ketoacyl-(acyl 72.1 5.1 0.00011 30.3 3.3 48 95-146 101-151 (450)
334 PRK09496 trkA potassium transp 71.8 5.5 0.00012 30.1 3.4 27 2-28 247-273 (453)
335 COG3727 Vsr DNA G:T-mismatch r 69.9 13 0.00028 23.4 4.1 43 17-59 92-134 (150)
336 COG2185 Sbm Methylmalonyl-CoA 69.6 10 0.00022 24.2 3.7 64 2-67 33-96 (143)
337 PF12847 Methyltransf_18: Meth 69.4 9.3 0.0002 22.4 3.5 41 4-44 18-61 (112)
338 COG0300 DltE Short-chain dehyd 68.5 40 0.00086 24.0 7.0 57 7-67 4-61 (265)
339 cd02068 radical_SAM_B12_BD B12 68.5 24 0.00053 21.5 5.5 61 4-67 11-72 (127)
340 COG2910 Putative NADH-flavin r 68.4 3.1 6.8E-05 27.9 1.3 39 3-50 18-56 (211)
341 PRK13255 thiopurine S-methyltr 66.3 8.8 0.00019 26.2 3.2 23 3-25 53-75 (218)
342 PF15117 UPF0697: Uncharacteri 66.0 9.2 0.0002 22.0 2.7 62 82-146 11-72 (99)
343 PRK02261 methylaspartate mutas 66.0 31 0.00066 21.7 6.5 63 3-67 25-89 (137)
344 PRK13256 thiopurine S-methyltr 66.0 7.6 0.00017 26.8 2.8 45 3-47 59-115 (226)
345 PLN02350 phosphogluconate dehy 65.2 24 0.00053 27.4 5.6 27 1-27 21-47 (493)
346 PF02737 3HCDH_N: 3-hydroxyacy 64.6 4.8 0.0001 26.6 1.6 29 2-30 15-43 (180)
347 PTZ00142 6-phosphogluconate de 64.2 28 0.00061 26.9 5.8 67 1-67 16-97 (470)
348 PF12683 DUF3798: Protein of u 64.0 51 0.0011 23.6 7.4 93 19-121 44-140 (275)
349 COG2263 Predicted RNA methylas 64.0 12 0.00025 25.2 3.3 42 6-48 64-106 (198)
350 cd02069 methionine_synthase_B1 63.8 27 0.00059 23.8 5.2 62 4-67 111-173 (213)
351 TIGR02370 pyl_corrinoid methyl 62.6 44 0.00095 22.4 6.6 55 4-60 107-162 (197)
352 TIGR00561 pntA NAD(P) transhyd 62.2 76 0.0016 25.0 8.1 18 6-23 184-201 (511)
353 TIGR03439 methyl_EasF probable 61.8 34 0.00075 25.0 5.6 56 9-66 77-134 (319)
354 PF12241 Enoyl_reductase: Tran 61.6 49 0.0011 23.0 5.9 39 28-67 17-55 (237)
355 cd01075 NAD_bind_Leu_Phe_Val_D 61.4 4.8 0.0001 27.1 1.2 28 2-29 44-71 (200)
356 TIGR01724 hmd_rel H2-forming N 60.1 37 0.00081 25.0 5.5 58 1-58 35-103 (341)
357 PF04309 G3P_antiterm: Glycero 59.1 23 0.00049 23.5 4.0 56 10-67 21-76 (175)
358 TIGR03472 HpnI hopanoid biosyn 58.8 60 0.0013 24.0 6.7 58 9-66 42-100 (373)
359 PF00535 Glycos_transf_2: Glyc 58.5 39 0.00085 20.7 5.1 56 12-67 2-58 (169)
360 PRK07819 3-hydroxybutyryl-CoA 57.9 8.8 0.00019 27.3 2.1 27 2-28 21-47 (286)
361 KOG1429 dTDP-glucose 4-6-dehyd 57.6 27 0.00058 25.4 4.3 31 87-122 113-143 (350)
362 TIGR00507 aroE shikimate 5-deh 57.5 8.9 0.00019 27.0 2.1 29 3-31 134-162 (270)
363 PF00478 IMPDH: IMP dehydrogen 57.3 33 0.00072 25.4 5.0 61 4-71 115-179 (352)
364 PRK11036 putative S-adenosyl-L 57.0 14 0.00029 25.7 2.9 43 3-45 60-103 (255)
365 PF13649 Methyltransf_25: Meth 56.9 18 0.00039 20.9 3.0 47 10-67 25-71 (101)
366 PF01729 QRPTase_C: Quinolinat 56.8 54 0.0012 21.5 6.2 51 12-69 83-134 (169)
367 PF13684 Dak1_2: Dihydroxyacet 56.5 75 0.0016 23.1 7.0 60 8-67 237-297 (313)
368 PRK05096 guanosine 5'-monophos 55.5 84 0.0018 23.4 7.3 30 38-67 124-155 (346)
369 TIGR00640 acid_CoA_mut_C methy 55.1 42 0.00091 21.0 4.6 56 3-60 24-80 (132)
370 PF13847 Methyltransf_31: Meth 54.9 51 0.0011 20.7 5.7 40 8-47 27-66 (152)
371 TIGR03469 HonB hopene-associat 54.7 81 0.0017 23.5 6.8 53 10-62 42-96 (384)
372 COG4982 3-oxoacyl-[acyl-carrie 54.7 1.2E+02 0.0026 24.9 11.3 57 4-60 416-476 (866)
373 PRK06382 threonine dehydratase 54.3 62 0.0013 24.4 6.1 61 6-67 116-177 (406)
374 PLN02970 serine racemase 53.6 59 0.0013 23.7 5.8 62 5-67 117-179 (328)
375 COG1570 XseA Exonuclease VII, 53.6 1E+02 0.0022 23.8 7.8 72 13-84 140-216 (440)
376 TIGR00872 gnd_rel 6-phosphoglu 52.5 66 0.0014 23.0 5.8 27 1-27 15-41 (298)
377 TIGR00873 gnd 6-phosphoglucona 52.4 42 0.00091 25.9 5.0 28 1-28 14-41 (467)
378 PRK06843 inosine 5-monophospha 52.3 39 0.00085 25.6 4.7 59 4-69 160-222 (404)
379 PRK11933 yebU rRNA (cytosine-C 52.3 1.1E+02 0.0024 23.8 10.1 36 11-46 140-175 (470)
380 COG0362 Gnd 6-phosphogluconate 52.0 50 0.0011 25.2 5.1 27 2-28 19-45 (473)
381 COG0275 Predicted S-adenosylme 50.8 60 0.0013 23.7 5.2 52 10-67 49-100 (314)
382 TIGR00477 tehB tellurite resis 50.3 23 0.0005 23.5 3.1 26 4-29 47-72 (195)
383 PLN02274 inosine-5'-monophosph 50.1 28 0.00061 27.2 3.8 50 4-54 255-307 (505)
384 KOG2550 IMP dehydrogenase/GMP 49.9 58 0.0013 24.9 5.2 56 5-67 259-317 (503)
385 PF04007 DUF354: Protein of un 49.8 10 0.00022 27.9 1.4 28 2-29 20-47 (335)
386 TIGR01127 ilvA_1Cterm threonin 49.4 55 0.0012 24.3 5.2 62 5-67 90-152 (380)
387 COG0541 Ffh Signal recognition 49.2 1.1E+02 0.0024 23.6 6.6 66 1-71 120-194 (451)
388 COG1954 GlpP Glycerol-3-phosph 49.2 62 0.0013 21.5 4.7 54 12-67 27-80 (181)
389 TIGR03590 PseG pseudaminic aci 49.1 59 0.0013 23.0 5.1 17 2-18 24-40 (279)
390 PRK10073 putative glycosyl tra 49.0 1E+02 0.0022 22.4 6.5 58 10-67 8-66 (328)
391 TIGR00537 hemK_rel_arch HemK-r 48.9 72 0.0016 20.7 8.3 42 4-46 36-77 (179)
392 PRK12335 tellurite resistance 48.7 32 0.00069 24.4 3.8 41 4-45 137-177 (287)
393 COG1255 Uncharacterized protei 48.7 13 0.00029 22.8 1.5 36 2-48 29-64 (129)
394 PRK09260 3-hydroxybutyryl-CoA 48.4 13 0.00029 26.3 1.8 26 2-27 17-42 (288)
395 COG2084 MmsB 3-hydroxyisobutyr 48.4 28 0.00062 25.0 3.4 22 1-22 15-36 (286)
396 cd01562 Thr-dehyd Threonine de 48.3 65 0.0014 22.9 5.3 12 7-18 109-120 (304)
397 PRK00258 aroE shikimate 5-dehy 48.2 13 0.00028 26.3 1.7 26 4-29 141-167 (278)
398 PF07015 VirC1: VirC1 protein; 47.7 49 0.0011 23.0 4.3 20 1-20 22-41 (231)
399 KOG0409 Predicted dehydrogenas 47.6 26 0.00057 25.5 3.1 26 1-26 50-75 (327)
400 KOG1372 GDP-mannose 4,6 dehydr 46.9 20 0.00043 25.4 2.4 57 2-58 45-106 (376)
401 PRK06035 3-hydroxyacyl-CoA deh 46.9 16 0.00035 26.0 2.0 26 2-27 19-44 (291)
402 TIGR00735 hisF imidazoleglycer 46.7 73 0.0016 22.2 5.2 25 38-67 202-226 (254)
403 KOG0023 Alcohol dehydrogenase, 46.7 41 0.00088 24.8 3.9 44 4-54 199-244 (360)
404 PRK07530 3-hydroxybutyryl-CoA 46.4 16 0.00035 25.9 2.0 26 2-27 20-45 (292)
405 COG4565 CitB Response regulato 46.1 98 0.0021 21.4 7.6 55 8-67 24-78 (224)
406 PF10100 DUF2338: Uncharacteri 45.1 45 0.00096 25.4 4.0 117 6-123 21-148 (429)
407 TIGR02026 BchE magnesium-proto 45.0 91 0.002 24.3 5.9 64 5-69 32-99 (497)
408 PRK09424 pntA NAD(P) transhydr 44.9 1.5E+02 0.0033 23.3 9.2 18 7-24 186-203 (509)
409 TIGR01302 IMP_dehydrog inosine 44.9 52 0.0011 25.2 4.5 50 5-55 232-284 (450)
410 COG1090 Predicted nucleoside-d 44.8 46 0.00099 24.0 3.9 20 2-21 15-34 (297)
411 COG0169 AroE Shikimate 5-dehyd 44.7 18 0.00039 25.9 2.0 31 3-33 143-174 (283)
412 TIGR01915 npdG NADPH-dependent 44.7 17 0.00038 24.6 1.8 27 2-28 17-43 (219)
413 COG1897 MetA Homoserine trans- 44.6 45 0.00098 23.7 3.7 66 37-104 67-146 (307)
414 PRK07048 serine/threonine dehy 44.5 61 0.0013 23.4 4.7 61 6-67 115-176 (321)
415 PRK00748 1-(5-phosphoribosyl)- 44.4 56 0.0012 22.2 4.3 13 22-34 148-160 (233)
416 PF01795 Methyltransf_5: MraW 44.0 34 0.00075 24.9 3.3 54 9-67 44-97 (310)
417 PRK06129 3-hydroxyacyl-CoA deh 43.9 18 0.00039 26.0 1.9 24 2-25 18-41 (308)
418 PRK03910 D-cysteine desulfhydr 43.8 1.3E+02 0.0027 22.0 6.2 62 5-67 116-187 (331)
419 PF03807 F420_oxidored: NADP o 43.8 16 0.00034 20.9 1.4 27 3-29 16-46 (96)
420 TIGR01501 MthylAspMutase methy 43.7 78 0.0017 20.0 4.5 56 3-60 23-79 (134)
421 KOG1208 Dehydrogenases with di 43.5 1.3E+02 0.0028 22.0 7.1 57 6-66 32-88 (314)
422 PRK08293 3-hydroxybutyryl-CoA 43.3 20 0.00043 25.4 2.0 27 2-28 19-45 (287)
423 COG1352 CheR Methylase of chem 43.3 38 0.00083 24.1 3.4 47 81-127 56-109 (268)
424 PF13382 Adenine_deam_C: Adeni 43.3 69 0.0015 21.1 4.3 31 4-34 60-90 (171)
425 PF04672 Methyltransf_19: S-ad 43.0 56 0.0012 23.3 4.1 46 7-52 93-138 (267)
426 TIGR00715 precor6x_red precorr 42.5 28 0.00061 24.5 2.6 20 2-21 16-35 (256)
427 PRK02842 light-independent pro 42.3 64 0.0014 24.5 4.6 100 2-110 306-412 (427)
428 COG3268 Uncharacterized conser 42.2 10 0.00022 27.9 0.4 47 2-54 23-69 (382)
429 PRK13562 acetolactate synthase 42.1 69 0.0015 18.5 3.8 16 43-58 51-66 (84)
430 COG1058 CinA Predicted nucleot 42.0 1.2E+02 0.0027 21.4 6.9 68 21-94 22-91 (255)
431 PRK14484 phosphotransferase ma 42.0 61 0.0013 20.1 3.8 48 12-60 4-51 (124)
432 KOG0781 Signal recognition par 41.7 1.5E+02 0.0033 23.4 6.3 68 2-73 399-480 (587)
433 PRK12549 shikimate 5-dehydroge 41.5 36 0.00077 24.3 3.1 30 3-32 144-174 (284)
434 PRK07334 threonine dehydratase 41.4 65 0.0014 24.2 4.6 62 5-67 113-175 (403)
435 PRK06815 hypothetical protein; 41.4 88 0.0019 22.6 5.1 62 5-67 110-172 (317)
436 cd01065 NAD_bind_Shikimate_DH 41.2 21 0.00045 22.4 1.7 25 5-29 38-63 (155)
437 COG0788 PurU Formyltetrahydrof 41.1 1.3E+02 0.0029 21.5 6.4 73 42-119 122-195 (287)
438 PF01210 NAD_Gly3P_dh_N: NAD-d 41.1 13 0.00028 23.8 0.8 26 2-27 15-40 (157)
439 TIGR01675 plant-AP plant acid 41.0 21 0.00046 24.7 1.8 31 3-33 130-161 (229)
440 PRK05370 argininosuccinate syn 40.9 1.6E+02 0.0035 22.8 6.4 55 8-64 10-66 (447)
441 PLN02545 3-hydroxybutyryl-CoA 40.3 23 0.0005 25.2 2.0 24 2-25 20-43 (295)
442 cd05291 HicDH_like L-2-hydroxy 40.2 1.4E+02 0.003 21.5 7.0 29 3-31 17-47 (306)
443 cd04185 GT_2_like_b Subfamily 39.9 1E+02 0.0023 19.9 5.7 47 13-59 2-49 (202)
444 PF13433 Peripla_BP_5: Peripla 39.8 1.6E+02 0.0035 22.1 6.2 59 6-67 130-193 (363)
445 PRK11204 N-glycosyltransferase 39.7 1.5E+02 0.0032 22.2 6.3 58 10-67 56-114 (420)
446 PF05724 TPMT: Thiopurine S-me 39.6 53 0.0012 22.5 3.6 56 3-67 53-120 (218)
447 PLN02520 bifunctional 3-dehydr 39.5 19 0.00041 28.2 1.6 25 4-28 397-421 (529)
448 PTZ00314 inosine-5'-monophosph 39.2 77 0.0017 24.8 4.7 29 25-54 272-300 (495)
449 COG1609 PurR Transcriptional r 39.2 1.5E+02 0.0033 21.6 8.2 26 93-122 160-185 (333)
450 PRK06114 short chain dehydroge 39.1 1.2E+02 0.0027 20.6 7.4 53 5-60 4-56 (254)
451 TIGR03599 YloV DAK2 domain fus 39.0 2E+02 0.0043 22.9 7.2 59 9-67 455-514 (530)
452 COG2242 CobL Precorrin-6B meth 39.0 1E+02 0.0023 20.7 4.7 39 7-45 56-94 (187)
453 PF04312 DUF460: Protein of un 38.9 1E+02 0.0022 19.6 6.0 52 7-63 50-101 (138)
454 COG0552 FtsY Signal recognitio 38.8 1.3E+02 0.0028 22.3 5.5 68 1-73 159-235 (340)
455 TIGR01182 eda Entner-Doudoroff 38.8 79 0.0017 21.5 4.2 43 17-63 17-59 (204)
456 PRK03522 rumB 23S rRNA methylu 38.6 47 0.001 24.0 3.3 42 4-45 190-231 (315)
457 PRK12557 H(2)-dependent methyl 38.5 1.4E+02 0.0031 22.0 5.8 21 1-21 35-55 (342)
458 KOG0820 Ribosomal RNA adenine 38.5 35 0.00076 24.6 2.5 46 3-48 74-120 (315)
459 COG4301 Uncharacterized conser 38.5 1.5E+02 0.0032 21.3 7.6 49 16-66 87-135 (321)
460 TIGR02279 PaaC-3OHAcCoADH 3-hy 38.3 25 0.00054 27.4 2.0 25 2-26 21-45 (503)
461 PRK08268 3-hydroxy-acyl-CoA de 38.2 25 0.00054 27.4 2.0 25 2-26 23-47 (507)
462 PRK07476 eutB threonine dehydr 38.0 91 0.002 22.6 4.8 62 5-67 109-171 (322)
463 TIGR01303 IMP_DH_rel_1 IMP deh 37.9 1.2E+02 0.0027 23.6 5.6 58 3-67 231-291 (475)
464 TIGR01680 Veg_Stor_Prot vegeta 37.5 27 0.00058 25.0 1.9 32 3-34 155-187 (275)
465 PRK05458 guanosine 5'-monophos 37.5 1.1E+02 0.0024 22.5 5.0 50 4-54 104-158 (326)
466 cd01080 NAD_bind_m-THF_DH_Cycl 37.4 24 0.00053 23.1 1.6 28 7-34 42-69 (168)
467 PF09445 Methyltransf_15: RNA 37.2 59 0.0013 21.3 3.3 43 4-46 16-59 (163)
468 COG1832 Predicted CoA-binding 37.1 1.1E+02 0.0024 19.5 5.4 61 3-67 37-101 (140)
469 PRK08198 threonine dehydratase 37.0 1.5E+02 0.0032 22.3 5.8 62 5-67 112-174 (404)
470 PRK07792 fabG 3-ketoacyl-(acyl 36.9 1.5E+02 0.0034 21.1 7.0 51 7-60 10-60 (306)
471 COG2226 UbiE Methylase involve 36.8 39 0.00084 23.6 2.6 24 10-33 76-99 (238)
472 cd06292 PBP1_LacI_like_10 Liga 36.5 1.4E+02 0.003 20.4 8.8 55 5-59 25-81 (273)
473 TIGR00446 nop2p NOL1/NOP2/sun 36.2 1.5E+02 0.0033 20.8 10.5 36 10-45 97-132 (264)
474 COG1512 Beta-propeller domains 36.2 87 0.0019 22.4 4.2 43 19-61 48-90 (271)
475 PRK14583 hmsR N-glycosyltransf 36.0 2E+02 0.0042 22.0 6.7 58 10-67 77-135 (444)
476 cd06448 L-Ser-dehyd Serine deh 36.0 1E+02 0.0022 22.3 4.7 63 5-67 93-160 (316)
477 TIGR01124 ilvA_2Cterm threonin 35.9 1.4E+02 0.0029 23.5 5.6 60 5-67 107-170 (499)
478 cd04731 HisF The cyclase subun 35.7 1.4E+02 0.0031 20.5 5.3 25 38-67 196-220 (243)
479 cd06442 DPM1_like DPM1_like re 35.5 1.3E+02 0.0028 19.8 5.7 50 18-67 8-58 (224)
480 TIGR00677 fadh2_euk methylenet 35.5 94 0.002 22.2 4.4 55 9-63 59-128 (281)
481 PF03721 UDPG_MGDP_dh_N: UDP-g 35.4 15 0.00033 24.3 0.4 23 2-24 16-38 (185)
482 cd02520 Glucosylceramide_synth 35.3 1.3E+02 0.0028 19.6 6.0 56 10-65 3-59 (196)
483 PTZ00338 dimethyladenosine tra 35.2 42 0.00092 24.1 2.6 44 3-46 52-96 (294)
484 KOG2730 Methylase [General fun 35.1 37 0.0008 23.7 2.2 49 4-52 111-160 (263)
485 KOG1221 Acyl-CoA reductase [Li 35.0 1.7E+02 0.0037 22.8 5.8 73 36-122 80-157 (467)
486 PRK07066 3-hydroxybutyryl-CoA 34.9 33 0.00071 25.1 2.1 26 2-27 23-48 (321)
487 COG2085 Predicted dinucleotide 34.7 24 0.00051 24.2 1.2 59 1-62 16-85 (211)
488 PF05401 NodS: Nodulation prot 34.6 42 0.00092 22.8 2.4 43 3-47 59-101 (201)
489 PF05221 AdoHcyase: S-adenosyl 34.4 87 0.0019 22.4 4.0 53 3-58 61-114 (268)
490 KOG0747 Putative NAD+-dependen 34.1 43 0.00094 24.3 2.4 74 36-122 58-134 (331)
491 TIGR01692 HIBADH 3-hydroxyisob 34.1 27 0.00058 24.8 1.5 24 2-25 12-35 (288)
492 PF01209 Ubie_methyltran: ubiE 33.6 1.5E+02 0.0032 20.5 5.0 38 9-46 72-109 (233)
493 TIGR02364 dha_pts dihydroxyace 33.6 1E+02 0.0022 19.1 3.8 42 11-52 2-43 (125)
494 PF06962 rRNA_methylase: Putat 33.4 79 0.0017 20.2 3.3 106 11-138 1-110 (140)
495 PRK06130 3-hydroxybutyryl-CoA 33.2 34 0.00075 24.5 2.0 26 2-27 20-45 (311)
496 PF02601 Exonuc_VII_L: Exonucl 33.1 1.9E+02 0.0041 20.9 8.7 55 13-67 19-79 (319)
497 PRK00107 gidB 16S rRNA methylt 33.1 1.3E+02 0.0029 20.0 4.6 38 8-45 68-105 (187)
498 PF08241 Methyltransf_11: Meth 32.8 79 0.0017 17.3 3.2 40 5-47 14-54 (95)
499 TIGR01809 Shik-DH-AROM shikima 32.7 32 0.0007 24.5 1.7 26 4-29 143-169 (282)
500 cd00640 Trp-synth-beta_II Tryp 32.5 1.4E+02 0.0029 20.5 4.8 61 5-67 92-157 (244)
No 1
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.96 E-value=1.9e-29 Score=168.62 Aligned_cols=140 Identities=23% Similarity=0.236 Sum_probs=129.2
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|++.|++|++++|+.+.++++.+++.+ . .+..+..|++|.++++.+++.+.++|+++|+| ||.... .++.
T Consensus 23 A~~l~~~G~~vvl~aRR~drL~~la~~~~~--~-~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiLvNNAGl~~g-~~~~ 98 (246)
T COG4221 23 ARALAEAGAKVVLAARREERLEALADEIGA--G-AALALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALG-DPLD 98 (246)
T ss_pred HHHHHHCCCeEEEEeccHHHHHHHHHhhcc--C-ceEEEeeccCCHHHHHHHHHHHHHhhCcccEEEecCCCCcC-Chhh
Confidence 678999999999999999999999999965 2 58999999999999999999999999999999 898844 8999
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhccC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRSI 147 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e~ 147 (147)
+.+.++|++++++|+.|.++.+++.+|.|.++++|.|||+||++|..++++. ++++..|++ .||+|+
T Consensus 99 ~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~aV~~fs~--~LR~e~ 171 (246)
T COG4221 99 EADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSL--GLRQEL 171 (246)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHHHHHHHHH--HHHHHh
Confidence 9999999999999999999999999999999999999999999999887654 578889998 899875
No 2
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.96 E-value=4.7e-29 Score=171.75 Aligned_cols=144 Identities=22% Similarity=0.274 Sum_probs=131.3
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCc-eEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDN-VIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~ 76 (147)
+|++|+++|++++++.|....++++.+++++.+... ++++.||++|++++.++++.+.++||++|+| ||... ...
T Consensus 28 lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~-~~~ 106 (282)
T KOG1205|consen 28 LAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFGRVDVLVNNAGISL-VGF 106 (282)
T ss_pred HHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcCCCCEEEecCcccc-ccc
Confidence 467899999999999999999999989998876555 9999999999999999999999999999999 88875 677
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC------CchhhhccccchhhhhccC
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI------TNEWAKGVLSDWMRCRRSI 147 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~------~~~~~~~~~~~~~al~~e~ 147 (147)
....+.+++.+.|++|++|+.+++++++|+|++++.|+||++||++|..+.| ++++|..+|++ +||.|+
T Consensus 107 ~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~ASK~Al~~f~e--tLR~El 181 (282)
T KOG1205|consen 107 LEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYSASKHALEGFFE--TLRQEL 181 (282)
T ss_pred cccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccchHHHHHHHHHH--HHHHHh
Confidence 8888999999999999999999999999999999889999999999998754 55789999999 999985
No 3
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.95 E-value=8.1e-28 Score=164.50 Aligned_cols=144 Identities=18% Similarity=0.206 Sum_probs=130.8
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+.++++++.++++...+..+.++.+|+++++++.++.+++.+..+.||++ ||.. ...++
T Consensus 22 ~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~IdvLVNNAG~g-~~g~f 100 (265)
T COG0300 22 LAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGGPIDVLVNNAGFG-TFGPF 100 (265)
T ss_pred HHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCCcccEEEECCCcC-Cccch
Confidence 3678999999999999999999999999998765578999999999999999999999998899999 8877 45889
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhccC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRSI 147 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e~ 147 (147)
.+.+.++.++++++|+.++..|+++++|.|.++++|.||||+|.+|..+.|. +++++.+|+. +||.|+
T Consensus 101 ~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATKa~v~~fSe--aL~~EL 174 (265)
T COG0300 101 LELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSE--ALREEL 174 (265)
T ss_pred hhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHHHHHHHHHH--HHHHHh
Confidence 9999999999999999999999999999999999999999999999988654 3467778888 899885
No 4
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.94 E-value=3.4e-26 Score=156.81 Aligned_cols=142 Identities=16% Similarity=0.180 Sum_probs=128.3
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
++.+++++|+++++.+.+.+..+++.++++..| ++..+.||++|.+++.+..+++++++|.+|++ ||+. +..++
T Consensus 54 ialefa~rg~~~vl~Din~~~~~etv~~~~~~g--~~~~y~cdis~~eei~~~a~~Vk~e~G~V~ILVNNAGI~-~~~~l 130 (300)
T KOG1201|consen 54 IALEFAKRGAKLVLWDINKQGNEETVKEIRKIG--EAKAYTCDISDREEIYRLAKKVKKEVGDVDILVNNAGIV-TGKKL 130 (300)
T ss_pred HHHHHHHhCCeEEEEeccccchHHHHHHHHhcC--ceeEEEecCCCHHHHHHHHHHHHHhcCCceEEEeccccc-cCCCc
Confidence 467899999999999999999999999998775 69999999999999999999999999999999 8988 55778
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC------CCchhhhccccchhhhhccC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN------ITNEWAKGVLSDWMRCRRSI 147 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~------~~~~~~~~~~~~~~al~~e~ 147 (147)
.+.+.+++++++++|+.|+++.+|+|+|.|.+.++|.||+|+|++|..+. .+++.+..+|.+ +|+.|+
T Consensus 131 l~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaSK~a~vGfhe--sL~~EL 204 (300)
T KOG1201|consen 131 LDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCASKFAAVGFHE--SLSMEL 204 (300)
T ss_pred cCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhhHHHHHHHHH--HHHHHH
Confidence 88999999999999999999999999999999999999999999998774 456678888888 777664
No 5
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=99.90 E-value=2.1e-23 Score=135.91 Aligned_cols=140 Identities=20% Similarity=0.195 Sum_probs=118.4
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
|++.|.+.|-+|++++|+.+.++++.++. +.++...||+.|.++.+++++.+++.|+.++++ ||+.....-.
T Consensus 21 lak~f~elgN~VIi~gR~e~~L~e~~~~~-----p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvliNNAGIqr~~dlt 95 (245)
T COG3967 21 LAKRFLELGNTVIICGRNEERLAEAKAEN-----PEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLT 95 (245)
T ss_pred HHHHHHHhCCEEEEecCcHHHHHHHHhcC-----cchheeeecccchhhHHHHHHHHHhhCCchheeeecccccchhhcc
Confidence 35678889999999999999888776654 258899999999999999999999999999999 9987442222
Q ss_pred -hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC------CCchhhhccccchhhhhccC
Q 040927 78 -LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN------ITNEWAKGVLSDWMRCRRSI 147 (147)
Q Consensus 78 -~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~------~~~~~~~~~~~~~~al~~e~ 147 (147)
.+...++.+..+++|+.+|+++++.++|++.++..+.|||+||..+..|. ...+++++.|+. +||.++
T Consensus 96 ~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaTKAaiHsyt~--aLR~Ql 170 (245)
T COG3967 96 GAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHSYTL--ALREQL 170 (245)
T ss_pred CCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhhHHHHHHHHH--HHHHHh
Confidence 23446778899999999999999999999999988999999999998874 455688999999 898764
No 6
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.90 E-value=8.3e-23 Score=142.00 Aligned_cols=143 Identities=18% Similarity=0.149 Sum_probs=117.7
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+.+.++++.+++....+.++.++.+|++|+++++++++++. ++|++|++ +|.. ...++
T Consensus 24 ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~~g~iD~lv~nag~~-~~~~~ 101 (263)
T PRK08339 24 VARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-NIGEPDIFFFSTGGP-KPGYF 101 (263)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-hhCCCcEEEECCCCC-CCCCc
Confidence 3577899999999999999888888888765433368899999999999999999986 58999998 6765 33667
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhccC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRSI 147 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e~ 147 (147)
.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||.++..+.+. .+++...|+. ++++|+
T Consensus 102 ~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asKaal~~l~~--~la~el 175 (263)
T PRK08339 102 MEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAGLVR--TLAKEL 175 (263)
T ss_pred ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHHHHHHHHHH--HHHHHh
Confidence 7889999999999999999999999999998887899999999988766443 2355666666 666653
No 7
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=99.89 E-value=4.9e-23 Score=133.30 Aligned_cols=141 Identities=17% Similarity=0.156 Sum_probs=119.9
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
+..|+++|++|++.+++.+..+++...|...+ +...+.||++++.+++..+++..+.+|+++++ ||+.. ...+.
T Consensus 31 a~~la~~Garv~v~dl~~~~A~ata~~L~g~~--~h~aF~~DVS~a~~v~~~l~e~~k~~g~psvlVncAGItr-D~~Ll 107 (256)
T KOG1200|consen 31 AQLLAKKGARVAVADLDSAAAEATAGDLGGYG--DHSAFSCDVSKAHDVQNTLEEMEKSLGTPSVLVNCAGITR-DGLLL 107 (256)
T ss_pred HHHHHhcCcEEEEeecchhhHHHHHhhcCCCC--ccceeeeccCcHHHHHHHHHHHHHhcCCCcEEEEcCcccc-cccee
Confidence 45688999999999999998898888886654 36789999999999999999999999999999 89984 47777
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccC--CCCeEEEEcCCCCCCcCCCch------hhhccccchhhhhccC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLS--DSPRIVNASSSMGKLKNITNE------WAKGVLSDWMRCRRSI 147 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~~~iv~isS~~~~~~~~~~~------~~~~~~~~~~al~~e~ 147 (147)
.++.++|++.+.+|+.|.|+++|++...|..+ ..++|||+||+.|.++..++. +.+-.|++ +.+||+
T Consensus 108 rmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK~GvIgftk--taArEl 182 (256)
T KOG1200|consen 108 RMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASKGGVIGFTK--TAAREL 182 (256)
T ss_pred eccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhcCceeeeeH--HHHHHH
Confidence 89999999999999999999999999985433 345999999999999866654 44567777 777764
No 8
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.89 E-value=2e-22 Score=144.06 Aligned_cols=142 Identities=22% Similarity=0.207 Sum_probs=122.2
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+.++++.++++..+. ++.++.+|++|+++++++++++.+.+|++|++ +|.. ...++.
T Consensus 24 a~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~-~~~~~~ 101 (330)
T PRK06139 24 AEAFARRGARLVLAARDEEALQAVAEECRALGA-EVLVVPTDVTDADQVKALATQAASFGGRIDVWVNNVGVG-AVGRFE 101 (330)
T ss_pred HHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcC-CCCCcc
Confidence 567889999999999999999999888887765 58889999999999999999999988999999 7765 446778
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhccC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRSI 147 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e~ 147 (147)
+.+.++|++.+++|+.+++++++.++|+|.+++.|+||++||..+..+.+.. +++...|++ +|+.|+
T Consensus 102 ~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~asKaal~~~~~--sL~~El 174 (330)
T PRK06139 102 ETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSE--ALRGEL 174 (330)
T ss_pred cCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHHHHHHHHHHH--HHHHHh
Confidence 8999999999999999999999999999998888999999998887665443 456666777 777663
No 9
>PRK08862 short chain dehydrogenase; Provisional
Probab=99.89 E-value=2.5e-22 Score=136.82 Aligned_cols=143 Identities=12% Similarity=-0.064 Sum_probs=119.3
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcC-CccEE---ecCCCcchh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFG-KLDIL---GGLPDNWYK 76 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-~id~l---ag~~~~~~~ 76 (147)
+++.|+++|++|++++|+.+.++++.+++...+. ++..+.+|++|+++++++++++.+++| ++|++ +|......+
T Consensus 21 ia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD~li~nag~~~~~~~ 99 (227)
T PRK08862 21 ISCHFARLGATLILCDQDQSALKDTYEQCSALTD-NVYSFQLKDFSQESIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSL 99 (227)
T ss_pred HHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC-CeEEEEccCCCHHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCc
Confidence 3567899999999999999999998888877665 578899999999999999999999998 99999 664434457
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCc---CCCchhhhccccchhhhhcc
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLK---NITNEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~---~~~~~~~~~~~~~~~al~~e 146 (147)
+.+.+.++|.+.+++|+.+++.+++.++|+|.+++ +|+||++||..+..+ +..+++++..|.. +|+.|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~Y~asKaal~~~~~--~la~e 171 (227)
T PRK08862 100 FDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDHQDLTGVESSNALVSGFTH--SWAKE 171 (227)
T ss_pred cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCCCcchhHHHHHHHHHHHH--HHHHH
Confidence 77889999999999999999999999999998654 689999999876543 3344567777777 66665
No 10
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=99.89 E-value=1.4e-22 Score=139.76 Aligned_cols=141 Identities=26% Similarity=0.260 Sum_probs=121.0
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcC--CccEE---ecCCCcch
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFG--KLDIL---GGLPDNWY 75 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~id~l---ag~~~~~~ 75 (147)
||+.|+++|++|++..-+++..+.+..+.+ .++...+..|++++++++++.+.+++..+ .+..+ ||+....+
T Consensus 45 LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~---s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gLwglVNNAGi~~~~g 121 (322)
T KOG1610|consen 45 LAKKLDKKGFRVFAGCLTEEGAESLRGETK---SPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGLWGLVNNAGISGFLG 121 (322)
T ss_pred HHHHHHhcCCEEEEEeecCchHHHHhhhhc---CCcceeEeeccCCHHHHHHHHHHHHHhcccccceeEEeccccccccC
Confidence 478899999999999887777777666654 23688889999999999999999888763 46666 89777778
Q ss_pred hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC------CchhhhccccchhhhhccC
Q 040927 76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI------TNEWAKGVLSDWMRCRRSI 147 (147)
Q Consensus 76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~------~~~~~~~~~~~~~al~~e~ 147 (147)
+....+.+++.+.+++|+.|++.+++.++|.+++++ |+|||+||+.|..+.| .++.++++|++ +||+|+
T Consensus 122 ~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~GR~~~p~~g~Y~~SK~aVeaf~D--~lR~EL 196 (322)
T KOG1610|consen 122 PDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLGRVALPALGPYCVSKFAVEAFSD--SLRREL 196 (322)
T ss_pred ccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEecccccCccCcccccchhhHHHHHHHHH--HHHHHH
Confidence 899999999999999999999999999999998875 9999999999987654 45678999999 999996
No 11
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.88 E-value=4e-22 Score=137.74 Aligned_cols=143 Identities=15% Similarity=0.084 Sum_probs=118.6
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+.++++++.+++...+. ++.++.||++|+++++++++++.++++++|++ +|......++
T Consensus 22 ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~ 100 (254)
T PRK07478 22 AAKLFAREGAKVVVGARRQAELDQLVAEIRAEGG-EAVALAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPV 100 (254)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCh
Confidence 3577889999999999999888888888877665 68899999999999999999999999999999 7765444677
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC-CcCC------Cchhhhccccchhhhhcc
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK-LKNI------TNEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~~~~------~~~~~~~~~~~~~al~~e 146 (147)
.+.+.++|++.+++|+.+++++++.++|.|++.+.++||++||..+. .+.+ .++++...+.. ++++|
T Consensus 101 ~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e 174 (254)
T PRK07478 101 AEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQ--VLAAE 174 (254)
T ss_pred hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHHHHHHHHHHHH--HHHHH
Confidence 78899999999999999999999999999988878999999998775 2322 23445555655 55554
No 12
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.88 E-value=8e-22 Score=137.81 Aligned_cols=140 Identities=18% Similarity=0.145 Sum_probs=109.6
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHh-cCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc---
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKN-SGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN--- 73 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~--- 73 (147)
+++.|+++|++|++++|+.. .++..+++.. .+. . ..+.||++|+++++++++++.+++|++|++ ||...+
T Consensus 23 iA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~-~-~~~~~Dv~d~~~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~ 99 (274)
T PRK08415 23 IAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGS-D-YVYELDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEAL 99 (274)
T ss_pred HHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCC-c-eEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCccCccccc
Confidence 36778899999999999853 2233334332 233 3 678899999999999999999999999999 776422
Q ss_pred chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC------CchhhhccccchhhhhccC
Q 040927 74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI------TNEWAKGVLSDWMRCRRSI 147 (147)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~------~~~~~~~~~~~~~al~~e~ 147 (147)
..++.+.+.++|++.+++|+.+++++++.++|.|.+ +|+||++||.++..+.+ .++++...|+. +|++|+
T Consensus 100 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~--~la~el 175 (274)
T PRK08415 100 EGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--GASVLTLSYLGGVKYVPHYNVMGVAKAALESSVR--YLAVDL 175 (274)
T ss_pred ccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--CCcEEEEecCCCccCCCcchhhhhHHHHHHHHHH--HHHHHh
Confidence 256778899999999999999999999999999975 38999999988876543 34566777777 666653
No 13
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.88 E-value=1e-21 Score=137.30 Aligned_cols=142 Identities=18% Similarity=0.150 Sum_probs=118.5
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+.+.++++.+++...+. ++.++.+|++|++++.++++++.+.+|++|++ ||.. ...++
T Consensus 22 la~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~li~nAg~~-~~~~~ 99 (275)
T PRK05876 22 TGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGF-DVHGVMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIV-VGGPI 99 (275)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCc
Confidence 3577889999999999999888888888876654 58889999999999999999999999999999 7765 34677
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS 146 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e 146 (147)
.+.+.++|++.+++|+.+++.+++.++|.|.+++ +|+||++||.++..+.++. +.+...|+. +|+.|
T Consensus 100 ~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~l~~e 173 (275)
T PRK05876 100 VEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAE--TLARE 173 (275)
T ss_pred ccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHHHHHHHHHH--HHHHH
Confidence 7899999999999999999999999999997665 6899999999888765443 344455565 56554
No 14
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.88 E-value=1.7e-21 Score=135.37 Aligned_cols=142 Identities=19% Similarity=0.154 Sum_probs=117.9
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCC-CceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGC-DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
++.|+++|++|++++|+.+++++..+++....+ .++..+.+|++|+++++++++++.+.++++|++ +|.. ...++
T Consensus 25 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~-~~~~~ 103 (265)
T PRK07062 25 VELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGGVDMLVNNAGQG-RVSTF 103 (265)
T ss_pred HHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC-CCCCh
Confidence 567889999999999999888888888766532 257889999999999999999999999999998 7765 34677
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS 146 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e 146 (147)
.+.+.++|++.+++|+.+++.+++.++|.|++.+.|+||++||..+..+.+.. +++...++. +++.|
T Consensus 104 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~asKaal~~~~~--~la~e 176 (265)
T PRK07062 104 ADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAARAGLLNLVK--SLATE 176 (265)
T ss_pred hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHHHHHHHHHHHH--HHHHH
Confidence 78899999999999999999999999999998877999999999887765433 344555555 55554
No 15
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.87 E-value=1.1e-21 Score=136.00 Aligned_cols=141 Identities=23% Similarity=0.199 Sum_probs=117.2
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHh--cCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKN--SGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~ 76 (147)
++.|+++|++|++++|+.+.+++..+++.. .+. ++.++.||++|++++..+++++.+.++++|++ +|... ..+
T Consensus 24 a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~ 101 (260)
T PRK07063 24 ARAFAREGAAVALADLDAALAERAAAAIARDVAGA-RVLAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINV-FAD 101 (260)
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCc-eEEEEEccCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCC-CCC
Confidence 567889999999999999888888888876 333 58899999999999999999999999999999 77652 345
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e 146 (147)
+.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.++ ++++...++. ++++|
T Consensus 102 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~--~la~e 175 (260)
T PRK07063 102 PLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHGLLGLTR--ALGIE 175 (260)
T ss_pred hhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHHHHHHHHHHH--HHHHH
Confidence 56788899999999999999999999999998877789999999887765443 3455666666 56554
No 16
>PRK08589 short chain dehydrogenase; Validated
Probab=99.87 E-value=1.2e-21 Score=136.81 Aligned_cols=141 Identities=18% Similarity=0.223 Sum_probs=116.3
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+ +.++++.+++...+. ++..+.||+++++++..+++++.+.+|++|++ +|......++
T Consensus 22 ia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~ 99 (272)
T PRK08589 22 SAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGG-KAKAYHVDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRI 99 (272)
T ss_pred HHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCC-eEEEEEeecCCHHHHHHHHHHHHHHcCCcCEEEECCCCCCCCCCc
Confidence 356788999999999999 778888888876654 68899999999999999999999999999999 7765334567
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e 146 (147)
.+.+.++|++.+++|+.+++.+++.++|+|.+++ |+||++||..+..+.+. ++.+...|+. ++++|
T Consensus 100 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~--~la~e 171 (272)
T PRK08589 100 HEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKGAVINFTK--SIAIE 171 (272)
T ss_pred ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHHHHHHHHHHHH--HHHHH
Confidence 7888999999999999999999999999998765 89999999888765433 3345566665 55554
No 17
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.87 E-value=1.7e-21 Score=135.94 Aligned_cols=139 Identities=17% Similarity=0.120 Sum_probs=108.7
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHH-hcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc---
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLK-NSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN--- 73 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~--- 73 (147)
+++.|+++|++|++++|+....++ .+++. ..+. ...+.+|++|+++++++++++.+++|++|++ ||....
T Consensus 25 iA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~g~--~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~ 101 (271)
T PRK06505 25 IAKQLAAQGAELAFTYQGEALGKR-VKPLAESLGS--DFVLPCDVEDIASVDAVFEALEKKWGKLDFVVHAIGFSDKNEL 101 (271)
T ss_pred HHHHHHhCCCEEEEecCchHHHHH-HHHHHHhcCC--ceEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEECCccCCCccc
Confidence 367899999999999998643333 33332 2232 3578999999999999999999999999999 776422
Q ss_pred chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC------Cchhhhccccchhhhhcc
Q 040927 74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI------TNEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~------~~~~~~~~~~~~~al~~e 146 (147)
..++.+.+.++|++.+++|+.+++++++.++|+|.+ +|+||++||.++..+.+ .++++...|+. +|++|
T Consensus 102 ~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~asKaAl~~l~r--~la~e 176 (271)
T PRK06505 102 KGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGSTRVMPNYNVMGVAKAALEASVR--YLAAD 176 (271)
T ss_pred cCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCccccCCccchhhhhHHHHHHHHH--HHHHH
Confidence 146778899999999999999999999999999974 48999999988765543 34566777777 66665
No 18
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=99.87 E-value=1.2e-21 Score=127.37 Aligned_cols=138 Identities=25% Similarity=0.308 Sum_probs=118.3
Q ss_pred ccccccCCc-EEEEeecC--hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcch
Q 040927 2 KRSNQVHYS-MGEATTKD--EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWY 75 (147)
Q Consensus 2 ~~~l~~~G~-~v~l~~r~--~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~ 75 (147)
++.|+++|+ .|++++|+ .+..+++..++...+. ++.++.||++++++++++++++.+.++++|++ +|... ..
T Consensus 17 a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~ld~li~~ag~~~-~~ 94 (167)
T PF00106_consen 17 ARALARRGARVVILTSRSEDSEGAQELIQELKAPGA-KITFIECDLSDPESIRALIEEVIKRFGPLDILINNAGIFS-DG 94 (167)
T ss_dssp HHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTS-EEEEEESETTSHHHHHHHHHHHHHHHSSESEEEEECSCTT-SB
T ss_pred HHHHHhcCceEEEEeeeccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccc-cc
Confidence 567788854 68999998 6778888888887774 79999999999999999999999999999999 77764 68
Q ss_pred hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCch------hhhccccchhhhhccC
Q 040927 76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNE------WAKGVLSDWMRCRRSI 147 (147)
Q Consensus 76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~------~~~~~~~~~~al~~e~ 147 (147)
++.+++.++|++.+++|+.+++++.+.++| ++.|.||++||.++..|.+... ++...|.. +|++|+
T Consensus 95 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~~~~~~Y~askaal~~~~~--~la~e~ 166 (167)
T PF00106_consen 95 SLDDLSEEELERVFRVNLFGPFLLAKALLP----QGGGKIVNISSIAGVRGSPGMSAYSASKAALRGLTQ--SLAAEL 166 (167)
T ss_dssp SGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTTEEEEEEEEGGGTSSSTTBHHHHHHHHHHHHHHH--HHHHHH
T ss_pred ccccccchhhhhccccccceeeeeeehhee----ccccceEEecchhhccCCCCChhHHHHHHHHHHHHH--HHHHhc
Confidence 888899999999999999999999999999 3469999999999998876653 56677777 788774
No 19
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.87 E-value=2.7e-21 Score=138.59 Aligned_cols=141 Identities=15% Similarity=0.121 Sum_probs=120.4
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+.++++.+++...+. ++.++.+|++|+++++++++.+.+++|++|++ +|.. ...++.
T Consensus 25 a~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~-~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~lInnAg~~-~~~~~~ 102 (334)
T PRK07109 25 ARAFARRGAKVVLLARGEEGLEALAAEIRAAGG-EALAVVADVADAEAVQAAADRAEEELGPIDTWVNNAMVT-VFGPFE 102 (334)
T ss_pred HHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCC-cEEEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcC-CCCchh
Confidence 567889999999999999988888888887765 68899999999999999999999999999998 6655 346777
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS 146 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e 146 (147)
+.+.++|++.+++|+.+++++++.++|+|.+++.|+||++||..+..+.+.. +++...|++ +++.|
T Consensus 103 ~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~l~~e 174 (334)
T PRK07109 103 DVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTD--SLRCE 174 (334)
T ss_pred hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHHHHHHHHHH--HHHHH
Confidence 8899999999999999999999999999998877999999999887665433 345566666 66655
No 20
>PRK08303 short chain dehydrogenase; Provisional
Probab=99.87 E-value=2.2e-21 Score=137.45 Aligned_cols=142 Identities=14% Similarity=0.051 Sum_probs=112.3
Q ss_pred ccccccCCcEEEEeecCh----------hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---e
Q 040927 2 KRSNQVHYSMGEATTKDE----------KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---G 68 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~----------~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---a 68 (147)
++.|++.|++|++++|+. +.++++.+++...+. ++.++.||++|+++++++++++.+++|++|++ +
T Consensus 25 a~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA 103 (305)
T PRK08303 25 AVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGG-RGIAVQVDHLVPEQVRALVERIDREQGRLDILVNDI 103 (305)
T ss_pred HHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEECC
Confidence 577899999999999973 455666677766554 57889999999999999999999999999999 6
Q ss_pred -cCC---CcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCC---------cCCCchhhhc
Q 040927 69 -GLP---DNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL---------KNITNEWAKG 135 (147)
Q Consensus 69 -g~~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~---------~~~~~~~~~~ 135 (147)
|.. ....++.+.+.++|++.+++|+.+++.+++.++|.|.++++|+||++||..+.. .|..++++..
T Consensus 104 ~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~~~~~~~~~Y~asKaal~ 183 (305)
T PRK08303 104 WGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNATHYRLSVFYDLAKTSVN 183 (305)
T ss_pred cccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccCcCCCCcchhHHHHHHHH
Confidence 642 112567778899999999999999999999999999877679999999976532 1233345666
Q ss_pred cccchhhhhcc
Q 040927 136 VLSDWMRCRRS 146 (147)
Q Consensus 136 ~~~~~~al~~e 146 (147)
.|+. +|+.|
T Consensus 184 ~lt~--~La~e 192 (305)
T PRK08303 184 RLAF--SLAHE 192 (305)
T ss_pred HHHH--HHHHH
Confidence 6666 56555
No 21
>PRK05599 hypothetical protein; Provisional
Probab=99.87 E-value=4.1e-21 Score=132.32 Aligned_cols=141 Identities=15% Similarity=0.091 Sum_probs=114.6
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+ +|++|++++|+.+.++++.+++++.+..++.++.||++|+++++++++++.+.+|++|++ +|.... .+..
T Consensus 17 a~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nag~~~~-~~~~ 94 (246)
T PRK05599 17 ATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISLAVVAFGILGD-QERA 94 (246)
T ss_pred HHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCEEEEecCcCCC-chhh
Confidence 56677 599999999999999999999887665347889999999999999999999999999999 776533 3445
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e 146 (147)
+.+.+++.+.+++|+.+++.+++.++|.|.+++ +|+||++||.++..+.+. ++++...|+. +|+.|
T Consensus 95 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~--~la~e 167 (246)
T PRK05599 95 ETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLDAFCQ--GLADS 167 (246)
T ss_pred hcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHHHHHH--HHHHH
Confidence 667778889999999999999999999997664 689999999988776433 3455666666 66655
No 22
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.86 E-value=3.3e-21 Score=133.77 Aligned_cols=140 Identities=16% Similarity=0.095 Sum_probs=108.6
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc---ch
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN---WY 75 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~---~~ 75 (147)
++.|+++|++|++++|+. ..++..+++....+ ....+.||++|+++++++++.+.+++|++|++ +|.... ..
T Consensus 27 a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~ 104 (260)
T PRK06603 27 AQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIG-CNFVSELDVTNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKG 104 (260)
T ss_pred HHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcC-CceEEEccCCCHHHHHHHHHHHHHHcCCccEEEEccccCCcccccC
Confidence 567889999999999874 34444555544322 23467899999999999999999999999999 565321 24
Q ss_pred hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC------CchhhhccccchhhhhccC
Q 040927 76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI------TNEWAKGVLSDWMRCRRSI 147 (147)
Q Consensus 76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~------~~~~~~~~~~~~~al~~e~ 147 (147)
++.+.+.++|++.+++|+.+++.+++.++|.|.+ +|+|||+||..+..+.+ .++++...|+. +|++|+
T Consensus 105 ~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~--~la~el 178 (260)
T PRK06603 105 RYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAEKVIPNYNVMGVAKAALEASVK--YLANDM 178 (260)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCccccCCCcccchhhHHHHHHHHHH--HHHHHh
Confidence 6778899999999999999999999999999964 48999999988765543 34566677777 666653
No 23
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.86 E-value=2.5e-21 Score=133.78 Aligned_cols=138 Identities=13% Similarity=0.048 Sum_probs=110.1
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc---c
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN---W 74 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~---~ 74 (147)
+++.|+++|++|++++|+. ..++..+++. + .++..+.||++|+++++++++++.+++|++|++ ||...+ .
T Consensus 25 ~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~--~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~ 100 (252)
T PRK06079 25 CAQAIKDQGATVIYTYQND-RMKKSLQKLV--D-EEDLLVECDVASDESIERAFATIKERVGKIDGIVHAIAYAKKEELG 100 (252)
T ss_pred HHHHHHHCCCEEEEecCch-HHHHHHHhhc--c-CceeEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEEccccccccccc
Confidence 3678899999999999984 4444444443 2 257889999999999999999999999999999 775432 2
Q ss_pred hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927 75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e 146 (147)
.++.+.+.++|+..+++|+.+++++++.++|+|.+ +|+||++||..+..+.+. ++++...|+. +|+.|
T Consensus 101 ~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~--~la~e 174 (252)
T PRK06079 101 GNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGSERAIPNYNVMGIAKAALESSVR--YLARD 174 (252)
T ss_pred CCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCccccCCcchhhHHHHHHHHHHHH--HHHHH
Confidence 56778899999999999999999999999999964 489999999888765443 3456667766 66665
No 24
>PRK07791 short chain dehydrogenase; Provisional
Probab=99.86 E-value=3.1e-21 Score=135.62 Aligned_cols=141 Identities=16% Similarity=0.136 Sum_probs=115.4
Q ss_pred ccccccCCcEEEEeecCh---------hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ec
Q 040927 2 KRSNQVHYSMGEATTKDE---------KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GG 69 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag 69 (147)
++.|++.|++|++++++. +.++++.+++...+. ++.++.+|++|++++.++++++.+.+|++|++ ||
T Consensus 23 a~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAG 101 (286)
T PRK07791 23 ALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGG-EAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAG 101 (286)
T ss_pred HHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCC-ceEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 567889999999998875 677778888876665 58889999999999999999999999999999 77
Q ss_pred CCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC------CCeEEEEcCCCCCCcCCC------chhhhccc
Q 040927 70 LPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD------SPRIVNASSSMGKLKNIT------NEWAKGVL 137 (147)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~~~iv~isS~~~~~~~~~------~~~~~~~~ 137 (147)
.. ...++.+.+.++|++.+++|+.+++++++.++|+|.+.. .|+||++||.++..+.+. ++++...+
T Consensus 102 ~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l 180 (286)
T PRK07791 102 IL-RDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGNYSAAKAGIAAL 180 (286)
T ss_pred CC-CCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCCCCchhhHHHHHHHHHH
Confidence 65 335677889999999999999999999999999997532 379999999988776543 33555666
Q ss_pred cchhhhhcc
Q 040927 138 SDWMRCRRS 146 (147)
Q Consensus 138 ~~~~al~~e 146 (147)
.. +++.|
T Consensus 181 ~~--~la~e 187 (286)
T PRK07791 181 TL--VAAAE 187 (286)
T ss_pred HH--HHHHH
Confidence 66 55554
No 25
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.86 E-value=2.6e-21 Score=133.62 Aligned_cols=142 Identities=18% Similarity=0.144 Sum_probs=116.1
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+.+.++++.+++...+. ++..+.+|++|++++.++++++.+.+|++|++ +|.. ...++
T Consensus 25 ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~-~~~~~ 102 (253)
T PRK05867 25 VALAYVEAGAQVAIAARHLDALEKLADEIGTSGG-KVVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGII-TVTPM 102 (253)
T ss_pred HHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCC-eEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC-CCCCh
Confidence 3567889999999999999888888888877664 68889999999999999999999999999999 6665 33567
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcC--------CCchhhhccccchhhhhcc
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKN--------ITNEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~--------~~~~~~~~~~~~~~al~~e 146 (147)
.+.+.++|++.+++|+.+++.+++.++|.|.+++ +|+||++||..+..+. ..++++...++. ++++|
T Consensus 103 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~asKaal~~~~~--~la~e 178 (253)
T PRK05867 103 LDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTK--AMAVE 178 (253)
T ss_pred hhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHHHHHHHHHHHH--HHHHH
Confidence 7889999999999999999999999999997654 4789999998765422 222345556665 55554
No 26
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=99.86 E-value=3.1e-21 Score=133.76 Aligned_cols=142 Identities=18% Similarity=0.149 Sum_probs=112.2
Q ss_pred CccccccCCcEEEEeecChh--hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc--
Q 040927 1 MKRSNQVHYSMGEATTKDEK--RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN-- 73 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~--~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~-- 73 (147)
+++.|+++|++|++++|+.+ ..++..+++...+. ++.++.+|++|+++++++++++.+++|++|++ +|....
T Consensus 24 ia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nag~~~~~~ 102 (258)
T PRK07370 24 IAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLN-PSLFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEE 102 (258)
T ss_pred HHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccC-cceEeecCcCCHHHHHHHHHHHHHHcCCCCEEEEcccccCccc
Confidence 36788999999999876543 34555666655543 46788999999999999999999999999999 775421
Q ss_pred -chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927 74 -WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 74 -~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e 146 (147)
..++.+.+.++|++.+++|+.+++++++.++|.|.+ +|+||++||..+..+.+. ++++...++. +|+.|
T Consensus 103 ~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~--~la~e 178 (258)
T PRK07370 103 LIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVRAIPNYNVMGVAKAALEASVR--YLAAE 178 (258)
T ss_pred ccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccccCCcccchhhHHHHHHHHHHH--HHHHH
Confidence 256778899999999999999999999999999975 489999999888765443 3456666766 66665
Q ss_pred C
Q 040927 147 I 147 (147)
Q Consensus 147 ~ 147 (147)
+
T Consensus 179 l 179 (258)
T PRK07370 179 L 179 (258)
T ss_pred h
Confidence 3
No 27
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.86 E-value=7.3e-21 Score=131.36 Aligned_cols=141 Identities=12% Similarity=0.032 Sum_probs=115.2
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+.++++.+++...+. ++.++.+|++|+++++++++++.+.++++|++ +|.. ...++.
T Consensus 18 a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lI~~ag~~-~~~~~~ 95 (252)
T PRK07677 18 AKRFAEEGANVVITGRTKEKLEEAKLEIEQFPG-QVLTVQMDVRNPEDVQKMVEQIDEKFGRIDALINNAAGN-FICPAE 95 (252)
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCC-CCCCcc
Confidence 567888999999999998888888777766554 68899999999999999999999999999998 6654 235667
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccC-CCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLS-DSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e 146 (147)
+.+.++|++++++|+.++++++++++|+|.+. .+|+||++||..+..+.+. ++.+...|.. +|++|
T Consensus 96 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~~~~~--~la~e 168 (252)
T PRK07677 96 DLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTR--TLAVE 168 (252)
T ss_pred cCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHHHHHH--HHHHH
Confidence 88999999999999999999999999998654 3589999999988765332 3455566666 55554
No 28
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.86 E-value=4.9e-21 Score=132.73 Aligned_cols=139 Identities=12% Similarity=0.034 Sum_probs=109.2
Q ss_pred CccccccCCcEEEEeecCh---hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc-
Q 040927 1 MKRSNQVHYSMGEATTKDE---KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN- 73 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~---~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~- 73 (147)
+++.|+++|++|++++|+. +.++++.+++. +. ++..+.+|++|+++++++++++.+++|++|++ +|....
T Consensus 25 ia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ld~lv~nag~~~~~ 101 (257)
T PRK08594 25 IARSLHNAGAKLVFTYAGERLEKEVRELADTLE--GQ-ESLLLPCDVTSDEEITACFETIKEEVGVIHGVAHCIAFANKE 101 (257)
T ss_pred HHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--CC-ceEEEecCCCCHHHHHHHHHHHHHhCCCccEEEECcccCCCC
Confidence 3678999999999998753 34444444442 32 58889999999999999999999999999999 665421
Q ss_pred --chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhc
Q 040927 74 --WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRR 145 (147)
Q Consensus 74 --~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~ 145 (147)
..++.+.+.++|+..+++|+.+++.+++.++|+|.+ +|+|||+||..+..+.+. ++++...|+. +|++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~--~la~ 177 (257)
T PRK08594 102 DLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGERVVQNYNVMGVAKASLEASVK--YLAN 177 (257)
T ss_pred cCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCccCCCCCchhHHHHHHHHHHHH--HHHH
Confidence 246678899999999999999999999999999965 489999999988765433 3456667766 6665
Q ss_pred c
Q 040927 146 S 146 (147)
Q Consensus 146 e 146 (147)
|
T Consensus 178 e 178 (257)
T PRK08594 178 D 178 (257)
T ss_pred H
Confidence 5
No 29
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=99.86 E-value=1.1e-20 Score=131.42 Aligned_cols=144 Identities=25% Similarity=0.227 Sum_probs=118.8
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCC--CceEEEEecCCCHHHHHHHHHHHHhh-cCCccEE---ecCCCcc
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGC--DNVIFHLLDVTDPASVDSLVHFVSSQ-FGKLDIL---GGLPDNW 74 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id~l---ag~~~~~ 74 (147)
+|+.|++.|++|++++|+.+.++++..++...+. .++..+.||++++++++++++...++ +|++|++ +|.....
T Consensus 24 ia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~GkidiLvnnag~~~~~ 103 (270)
T KOG0725|consen 24 IALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKFFGKIDILVNNAGALGLT 103 (270)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHhCCCCCEEEEcCCcCCCC
Confidence 3678999999999999999999998888776443 35889999999999999999999999 6999999 7776554
Q ss_pred hhhhcccHHHHHHhHHHhhh-hHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC-------chhhhccccchhhhhcc
Q 040927 75 YKMLTQTYELAEKCIQTNYY-GNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT-------NEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 75 ~~~~~~~~~~~~~~~~~n~~-~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~-------~~~~~~~~~~~~al~~e 146 (147)
.++.+++.++|++++++|+. +.+.+.+.+.|++.++++|.|+++||..+..+.++ +++++..++. +++.|
T Consensus 104 ~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~~~Y~~sK~al~~ltr--~lA~E 181 (270)
T KOG0725|consen 104 GSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSGVAYGVSKAALLQLTR--SLAKE 181 (270)
T ss_pred CChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCcccchhHHHHHHHHHH--HHHHH
Confidence 57889999999999999999 57788888888888888899999999988755333 3456666666 44443
No 30
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.85 E-value=5.1e-21 Score=132.19 Aligned_cols=140 Identities=16% Similarity=0.107 Sum_probs=110.7
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+.. ++..++++..+. ++.++.+|++|+++++++++++.+.+|++|++ +|.. ...++
T Consensus 24 ia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~lv~~ag~~-~~~~~ 99 (251)
T PRK12481 24 MAIGLAKAGADIVGVGVAEA--PETQAQVEALGR-KFHFITADLIQQKDIDSIVSQAVEVMGHIDILINNAGII-RRQDL 99 (251)
T ss_pred HHHHHHHCCCEEEEecCchH--HHHHHHHHHcCC-eEEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCc
Confidence 35678999999999988642 344455555554 68899999999999999999999999999999 7765 33567
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCC------Cchhhhccccchhhhhcc
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNI------TNEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~------~~~~~~~~~~~~~al~~e 146 (147)
.+.+.++|++.+++|+.+++.+++.++|.|.+++ +|+||++||..+..+.+ .++++...+.. +++.|
T Consensus 100 ~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK~a~~~l~~--~la~e 173 (251)
T PRK12481 100 LEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTR--ALATE 173 (251)
T ss_pred ccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHHHHHHHHHH--HHHHH
Confidence 7889999999999999999999999999997654 58999999988766543 33455566665 55544
No 31
>PLN00015 protochlorophyllide reductase
Probab=99.85 E-value=1.1e-20 Score=134.17 Aligned_cols=124 Identities=20% Similarity=0.073 Sum_probs=104.8
Q ss_pred CccccccCC-cEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927 1 MKRSNQVHY-SMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 1 ~~~~l~~~G-~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~ 76 (147)
+++.|+++| ++|++++|+.+.++++.+++...+. ++.++.+|++|.++++++++++.+.++++|++ ||......+
T Consensus 13 ia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lInnAG~~~~~~~ 91 (308)
T PLN00015 13 TAKALAETGKWHVVMACRDFLKAERAAKSAGMPKD-SYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAK 91 (308)
T ss_pred HHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCC-eEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEEECCCcCCCCCC
Confidence 367888999 9999999998888887777754333 57888999999999999999999888999999 776533334
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC--CCeEEEEcCCCCCC
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD--SPRIVNASSSMGKL 125 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~isS~~~~~ 125 (147)
+.+.+.++|++++++|+.|++.+++.++|.|.+++ +|+||++||..+..
T Consensus 92 ~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~ 142 (308)
T PLN00015 92 EPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNT 142 (308)
T ss_pred cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEecccccc
Confidence 55778899999999999999999999999998775 58999999987753
No 32
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.85 E-value=1.2e-20 Score=130.97 Aligned_cols=141 Identities=11% Similarity=-0.007 Sum_probs=107.4
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc---
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW--- 74 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~--- 74 (147)
+++.|+++|++|++++|+. ..++..+++....+ ....+.||++|+++++++++++.+++|++|++ ||.....
T Consensus 24 ~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~ 101 (261)
T PRK08690 24 IAKACREQGAELAFTYVVD-KLEERVRKMAAELD-SELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALS 101 (261)
T ss_pred HHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccC-CceEEECCCCCHHHHHHHHHHHHHHhCCCcEEEECCccCCccccc
Confidence 3678899999999998864 34444555544333 35678999999999999999999999999999 7765321
Q ss_pred h-hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927 75 Y-KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 75 ~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e 146 (147)
. .+.+.+.++|+..+++|+.+++++++.++|.|+++ +|+||++||..+..+.+. ++++...|+. ++++|
T Consensus 102 ~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~--~la~e 177 (261)
T PRK08690 102 GDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVRAIPNYNVMGMAKASLEAGIR--FTAAC 177 (261)
T ss_pred cchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEcccccccCCCCcccchhHHHHHHHHHH--HHHHH
Confidence 1 24567889999999999999999999999999755 489999999888765433 3455566655 55544
No 33
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.85 E-value=1.2e-20 Score=131.70 Aligned_cols=140 Identities=15% Similarity=0.090 Sum_probs=107.6
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc---c
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN---W 74 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~---~ 74 (147)
+++.|+++|++|++++|+.. ..+..+++....+ ....+.+|++|+++++++++++.+++|++|++ ||...+ .
T Consensus 28 ia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~ 105 (272)
T PRK08159 28 IAKACRAAGAELAFTYQGDA-LKKRVEPLAAELG-AFVAGHCDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELT 105 (272)
T ss_pred HHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcC-CceEEecCCCCHHHHHHHHHHHHHhcCCCcEEEECCcccCccccc
Confidence 36788999999999988732 2223333332222 35678999999999999999999999999999 776532 2
Q ss_pred hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC------Cchhhhccccchhhhhcc
Q 040927 75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI------TNEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~------~~~~~~~~~~~~~al~~e 146 (147)
.++.+.+.++|++.+++|+.+++.+++.++|+|.+ +|+||++||.++..+.+ .++++...|+. +|+.|
T Consensus 106 ~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~p~~~~Y~asKaal~~l~~--~la~e 179 (272)
T PRK08159 106 GRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--GGSILTLTYYGAEKVMPHYNVMGVAKAALEASVK--YLAVD 179 (272)
T ss_pred cCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCcchhhhhHHHHHHHHHH--HHHHH
Confidence 46678899999999999999999999999999964 48999999988765543 34456667766 66655
No 34
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.85 E-value=1.6e-20 Score=130.20 Aligned_cols=139 Identities=17% Similarity=0.106 Sum_probs=107.0
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc---ch
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN---WY 75 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~---~~ 75 (147)
++.|+++|++|++++|+....+ ..+++..... ...++.||++|+++++++++.+.+++|++|++ ||.... ..
T Consensus 29 a~~la~~G~~v~l~~r~~~~~~-~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~ 106 (258)
T PRK07533 29 ARAFRALGAELAVTYLNDKARP-YVEPLAEELD-APIFLPLDVREPGQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHG 106 (258)
T ss_pred HHHHHHcCCEEEEEeCChhhHH-HHHHHHHhhc-cceEEecCcCCHHHHHHHHHHHHHHcCCCCEEEEcCccCCcccccC
Confidence 5678999999999999864322 2233332222 35678999999999999999999999999999 776422 24
Q ss_pred hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC------Cchhhhccccchhhhhcc
Q 040927 76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI------TNEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~------~~~~~~~~~~~~~al~~e 146 (147)
++.+.+.++|++.+++|+.+++++++.++|.|++ +|+||++||..+..+.+ .++++...|+. +|+.|
T Consensus 107 ~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~~~~~~~~~~Y~asKaal~~l~~--~la~e 179 (258)
T PRK07533 107 RVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGAEKVVENYNLMGPVKAALESSVR--YLAAE 179 (258)
T ss_pred CcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEeccccccCCccchhhHHHHHHHHHHHH--HHHHH
Confidence 6678899999999999999999999999999964 48999999988765533 33456666666 66655
No 35
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.85 E-value=2.1e-20 Score=129.38 Aligned_cols=142 Identities=17% Similarity=0.082 Sum_probs=113.5
Q ss_pred CccccccCCcEEEEeecC-----------hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE--
Q 040927 1 MKRSNQVHYSMGEATTKD-----------EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL-- 67 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l-- 67 (147)
+++.|+++|++|++++++ .+..++..+++...+. ++.++.+|++|++++.++++++.+.+|++|++
T Consensus 24 ~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~ 102 (256)
T PRK12859 24 ICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGV-KVSSMELDLTQNDAPKELLNKVTEQLGYPHILVN 102 (256)
T ss_pred HHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 367889999999987532 2334455566666664 68899999999999999999999999999998
Q ss_pred -ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccch
Q 040927 68 -GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDW 140 (147)
Q Consensus 68 -ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~ 140 (147)
+|.. ...++.+.+.++|++.+++|+.+++.+.+.++|.|.+++.|+||++||..+..+.++ ++++...|.+
T Consensus 103 ~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~- 180 (256)
T PRK12859 103 NAAYS-TNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMVGELAYAATKGAIDALTS- 180 (256)
T ss_pred CCCCC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCCCCchHHHHHHHHHHHHHH-
Confidence 6665 336778899999999999999999999999999998877799999999998776544 2345566665
Q ss_pred hhhhcc
Q 040927 141 MRCRRS 146 (147)
Q Consensus 141 ~al~~e 146 (147)
++++|
T Consensus 181 -~la~~ 185 (256)
T PRK12859 181 -SLAAE 185 (256)
T ss_pred -HHHHH
Confidence 55554
No 36
>PRK05855 short chain dehydrogenase; Validated
Probab=99.85 E-value=1.1e-20 Score=143.64 Aligned_cols=142 Identities=18% Similarity=0.183 Sum_probs=120.2
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+.+.++++.++++..+. ++.++.||++|++++.++++++.+.+|++|++ ||.. ...++
T Consensus 331 ~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~-~~~~~ 408 (582)
T PRK05855 331 TALAFAREGAEVVASDIDEAAAERTAELIRAAGA-VAHAYRVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIG-MAGGF 408 (582)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHhcCCCcEEEECCccC-CCCCc
Confidence 3577899999999999999888888888877765 68999999999999999999999999999999 7775 34667
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e 146 (147)
.+.+.++|++++++|+.|++.+++.++|.|.+++ +|+||++||.++..+.++ ++++...++. +|++|
T Consensus 409 ~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~--~l~~e 482 (582)
T PRK05855 409 LDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSE--CLRAE 482 (582)
T ss_pred ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHHHHHHHHHH--HHHHH
Confidence 7889999999999999999999999999998765 489999999988766443 3345566666 66655
No 37
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.85 E-value=1.5e-20 Score=130.51 Aligned_cols=140 Identities=11% Similarity=0.023 Sum_probs=103.9
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc---
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW--- 74 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~--- 74 (147)
+++.|+++|++|++++|.... ++..+++....+ ....+.||++|+++++++++.+.+++|++|++ ||.....
T Consensus 24 ~a~~l~~~G~~v~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~ 101 (260)
T PRK06997 24 IAKACKREGAELAFTYVGDRF-KDRITEFAAEFG-SDLVFPCDVASDEQIDALFASLGQHWDGLDGLVHSIGFAPREAIA 101 (260)
T ss_pred HHHHHHHCCCeEEEEccchHH-HHHHHHHHHhcC-CcceeeccCCCHHHHHHHHHHHHHHhCCCcEEEEccccCCccccc
Confidence 367788999999998764221 222233322222 23568899999999999999999999999999 7764221
Q ss_pred hh-hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927 75 YK-MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 75 ~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e 146 (147)
.+ +.+.+.++|++.+++|+.+++++++.++|+|.+ +|+||++||..+..+.+. ++++...++. +|++|
T Consensus 102 ~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~--~g~Ii~iss~~~~~~~~~~~~Y~asKaal~~l~~--~la~e 176 (260)
T PRK06997 102 GDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERVVPNYNTMGLAKASLEASVR--YLAVS 176 (260)
T ss_pred cccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCCcchHHHHHHHHHHHHH--HHHHH
Confidence 12 345788999999999999999999999999953 489999999888765443 3456667776 66655
No 38
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.85 E-value=2.2e-20 Score=129.80 Aligned_cols=140 Identities=14% Similarity=0.014 Sum_probs=108.4
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc---
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW--- 74 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~--- 74 (147)
+++.|+++|++|++++|+ +.+++..+++....+ ....+.||++|+++++++++++.+.+|++|++ ||.....
T Consensus 24 ia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~ 101 (262)
T PRK07984 24 IAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLG-SDIVLPCDVAEDASIDAMFAELGKVWPKFDGFVHSIGFAPGDQLD 101 (262)
T ss_pred HHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccC-CceEeecCCCCHHHHHHHHHHHHhhcCCCCEEEECCccCCccccC
Confidence 367789999999999987 345555666655443 46788999999999999999999999999999 7754221
Q ss_pred -hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927 75 -YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 75 -~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e 146 (147)
.++.+.+.++|++.+++|+.+++.+++.++|.|.+ +|+||++||..+..+.+. ++.+...|+. +++.|
T Consensus 102 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~--~la~e 176 (262)
T PRK07984 102 GDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVMGLAKASLEANVR--YMANA 176 (262)
T ss_pred CcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC--CcEEEEEecCCCCCCCCCcchhHHHHHHHHHHHH--HHHHH
Confidence 12556788999999999999999999999997653 489999999887665433 3456666666 66655
No 39
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.85 E-value=1.3e-20 Score=130.29 Aligned_cols=125 Identities=18% Similarity=0.124 Sum_probs=106.9
Q ss_pred CccccccCCcEEEEeecChh-hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927 1 MKRSNQVHYSMGEATTKDEK-RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~ 76 (147)
+++.|+++|++|++++|+.+ .++++.+++...+. ++..+.+|++|++++.++++++.+.++++|++ +|... ..+
T Consensus 24 ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~-~~~ 101 (254)
T PRK06114 24 IAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGR-RAIQIAADVTSKADLRAAVARTEAELGALTLAVNAAGIAN-ANP 101 (254)
T ss_pred HHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCC
Confidence 35678899999999999754 45677777776654 58889999999999999999999999999999 77653 356
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~ 127 (147)
+.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.
T Consensus 102 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~ 152 (254)
T PRK06114 102 AEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVN 152 (254)
T ss_pred hHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCC
Confidence 778899999999999999999999999999988878999999998876544
No 40
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=99.85 E-value=7.6e-21 Score=130.54 Aligned_cols=139 Identities=22% Similarity=0.207 Sum_probs=114.5
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhc-CCccEE---ecCCCc---c
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQF-GKLDIL---GGLPDN---W 74 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~l---ag~~~~---~ 74 (147)
++.|+++|++|++++|+.+++++..+++....+. .++.||++++++++++++++.+.+ |++|++ +|.... .
T Consensus 13 a~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~--~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~~ 90 (241)
T PF13561_consen 13 ARALAEEGANVILTDRNEEKLADALEELAKEYGA--EVIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGISPPSNVE 90 (241)
T ss_dssp HHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTS--EEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEESCTGGGTS
T ss_pred HHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCC--ceEeecCcchHHHHHHHHHHHhhcCCCeEEEEecccccccccCC
Confidence 6788999999999999999877777777765543 369999999999999999999999 999988 665533 3
Q ss_pred hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCch------hhhccccchhhhhcc
Q 040927 75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNE------WAKGVLSDWMRCRRS 146 (147)
Q Consensus 75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~------~~~~~~~~~~al~~e 146 (147)
.++.+.+.++|++.+++|+.+++.+++.++|+|.+. |+||++||..+..+.+... ++...++. ++++|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~~~~~~~~~y~~sKaal~~l~r--~lA~e 164 (241)
T PF13561_consen 91 KPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQRPMPGYSAYSASKAALEGLTR--SLAKE 164 (241)
T ss_dssp SSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHHH--HHHHH
T ss_pred CChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhcccCccchhhHHHHHHHHHHHH--HHHHH
Confidence 678889999999999999999999999999988775 8999999998877765543 44555555 44443
No 41
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.84 E-value=3.1e-20 Score=128.84 Aligned_cols=143 Identities=10% Similarity=0.012 Sum_probs=114.9
Q ss_pred ccccccCCcEEEEeec-ChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC-----
Q 040927 2 KRSNQVHYSMGEATTK-DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD----- 72 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~----- 72 (147)
++.|+++|++|++++| +.+.++++.++++...+.++.++.+|++|+++++++++++.+.++++|++ ||...
T Consensus 25 a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~ 104 (260)
T PRK08416 25 VYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVG 104 (260)
T ss_pred HHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcCCccEEEECcccccccccc
Confidence 5678899999998875 56667777777765433368899999999999999999999999999998 66431
Q ss_pred cchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC------Cchhhhccccchhhhhcc
Q 040927 73 NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI------TNEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~------~~~~~~~~~~~~~al~~e 146 (147)
...++.+.+.++|++.+++|+.+++.+++.++|.|.+.+.|+||++||..+..+.+ .++++...++. +|++|
T Consensus 105 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~la~e 182 (260)
T PRK08416 105 GYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGHGTSKAAVETMVK--YAATE 182 (260)
T ss_pred ccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCcccchhhHHHHHHHHH--HHHHH
Confidence 23566778889999999999999999999999999887778999999988765433 34556666666 66665
No 42
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=99.84 E-value=5.5e-21 Score=131.79 Aligned_cols=141 Identities=14% Similarity=0.048 Sum_probs=116.1
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCc--cEE---ecCCC-cch
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKL--DIL---GGLPD-NWY 75 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i--d~l---ag~~~-~~~ 75 (147)
+++||++|.+|++++|+.++++++.+|+.+.....+.++.+|+++.+.+ .+.+.+....+ -+| +|... .+.
T Consensus 66 A~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~---ye~i~~~l~~~~VgILVNNvG~~~~~P~ 142 (312)
T KOG1014|consen 66 ARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEV---YEKLLEKLAGLDVGILVNNVGMSYDYPE 142 (312)
T ss_pred HHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchh---HHHHHHHhcCCceEEEEecccccCCCcH
Confidence 5789999999999999999999999999987765688999999998773 44444444444 444 77653 467
Q ss_pred hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCch------hhhccccchhhhhccC
Q 040927 76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNE------WAKGVLSDWMRCRRSI 147 (147)
Q Consensus 76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~------~~~~~~~~~~al~~e~ 147 (147)
.+.+.+...+++.+++|..++..+++.++|.|.++++|.|||+||.+|..|.|... .+...|+. +|++|.
T Consensus 143 ~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~~v~~~S~--~L~~Ey 218 (312)
T KOG1014|consen 143 SFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKAFVDFFSR--CLQKEY 218 (312)
T ss_pred HHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHHHHHHHHH--HHHHHH
Confidence 88899988999999999999999999999999999999999999999999876443 34556666 777763
No 43
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.84 E-value=3.8e-20 Score=128.68 Aligned_cols=141 Identities=18% Similarity=0.180 Sum_probs=117.3
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
+++|+++|++|++++|+.+.+++..+.+...+. ++..+.||++|+++++++++++.+.++++|++ +|... ..++.
T Consensus 27 a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~ 104 (265)
T PRK07097 27 AKAYAKAGATIVFNDINQELVDKGLAAYRELGI-EAHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIK-RIPML 104 (265)
T ss_pred HHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCC-CCCcc
Confidence 567889999999999999888888888876665 68899999999999999999999999999999 77653 35677
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS 146 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e 146 (147)
+.+.++|++++++|+.+++.+.+.++|+|.+.+.++||++||..+..+.++. +.+...++. ++++|
T Consensus 105 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~l~~--~la~e 176 (265)
T PRK07097 105 EMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTK--NIASE 176 (265)
T ss_pred cCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHHHHHHHHHHHH--HHHHH
Confidence 8899999999999999999999999999988778999999998876654332 344455555 55544
No 44
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.84 E-value=2.7e-20 Score=128.89 Aligned_cols=141 Identities=14% Similarity=0.112 Sum_probs=113.1
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+.++++.+++...+ ++.++.+|++|++++.++++++.+++|++|++ +|.........
T Consensus 19 a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~ 96 (257)
T PRK07024 19 AREYARQGATLGLVARRTDALQAFAARLPKAA--RVSVYAADVRDADALAAAAADFIAAHGLPDVVIANAGISVGTLTEE 96 (257)
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC--eeEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCccccc
Confidence 56788999999999999888877777664433 58899999999999999999999999999999 66543222233
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS 146 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e 146 (147)
+.+.++|+..+++|+.|++.+++.++|.|.+++.++||++||.++..+.+.. +.+...|.. +++.|
T Consensus 97 ~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~l~~e 168 (257)
T PRK07024 97 REDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIKYLE--SLRVE 168 (257)
T ss_pred cCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHHHHHH--HHHHH
Confidence 3778999999999999999999999999988888999999999887665433 345555555 55544
No 45
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.84 E-value=3.3e-20 Score=128.59 Aligned_cols=142 Identities=17% Similarity=0.067 Sum_probs=115.7
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC-cchh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD-NWYK 76 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~-~~~~ 76 (147)
+++.|+++|++|++++|+.+.+++..+++...+ ++.++.+|++|+++++++++++.+.++++|++ +|... ...+
T Consensus 16 ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li~naG~~~~~~~~ 93 (259)
T PRK08340 16 VARELLKKGARVVISSRNEENLEKALKELKEYG--EVYAVKADLSDKDDLKNLVKEAWELLGGIDALVWNAGNVRCEPCM 93 (259)
T ss_pred HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccc
Confidence 357788999999999999988888888886554 47889999999999999999999999999999 67542 2345
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhc-cCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQ-LSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e 146 (147)
+.+.+.++|.+.+++|+.+++++++.++|.|. +.++|+||++||..+..+.+. ++++...++. +|++|
T Consensus 94 ~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~~~~~--~la~e 168 (259)
T PRK08340 94 LHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQLAK--GVSRT 168 (259)
T ss_pred cccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHHHHHHH--HHHHH
Confidence 66788899999999999999999999999886 455689999999988766543 3345566666 55554
No 46
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.84 E-value=4.2e-20 Score=127.56 Aligned_cols=142 Identities=20% Similarity=0.168 Sum_probs=117.0
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+.+++..+++...+. ++.++.+|++|.+++.++++.+.+.+|++|++ +|......++.
T Consensus 24 a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~ 102 (253)
T PRK06172 24 ALAFAREGAKVVVADRDAAGGEETVALIREAGG-EALFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLA 102 (253)
T ss_pred HHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChh
Confidence 567889999999999999888888888876664 68899999999999999999999999999999 66543334567
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS 146 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e 146 (147)
+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.+.. +++...|+. ++++|
T Consensus 103 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~--~la~e 174 (253)
T PRK06172 103 EGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTK--SAAIE 174 (253)
T ss_pred hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHHHHHHHH--HHHHH
Confidence 8899999999999999999999999999988777899999998887665433 344455555 45444
No 47
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.84 E-value=4.6e-20 Score=127.27 Aligned_cols=143 Identities=15% Similarity=0.123 Sum_probs=117.7
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+.+.++++.+++...+. +...+.+|+++.++++.+++++.+.++++|++ +|......++
T Consensus 24 l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~ 102 (252)
T PRK07035 24 IAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGG-KAEALACHIGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHI 102 (252)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCc
Confidence 3567889999999999998888888888876664 57889999999999999999999999999998 6654334566
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS 146 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e 146 (147)
.+.+.++|++.+++|+.+++.+++.++|+|.+++.++|+++||..+..+.++. +++...+.. ++++|
T Consensus 103 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~al~~~~~--~l~~e 175 (252)
T PRK07035 103 LDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTK--AFAKE 175 (252)
T ss_pred ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHHHHHHHHHHH--HHHHH
Confidence 77889999999999999999999999999988777999999998877654332 345555555 55544
No 48
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.84 E-value=3.8e-20 Score=128.25 Aligned_cols=142 Identities=15% Similarity=0.125 Sum_probs=114.0
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+. ..++..+++...+. ++.++.+|++|++++.++++++.+.++++|++ ||......++
T Consensus 24 la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~ 101 (260)
T PRK12823 24 VALRAAAEGARVVLVDRSE-LVHEVAAELRAAGG-EALALTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPF 101 (260)
T ss_pred HHHHHHHCCCEEEEEeCch-HHHHHHHHHHhcCC-eEEEEEEeCCCHHHHHHHHHHHHHHcCCCeEEEECCccccCCCCh
Confidence 3567889999999999985 34556666665554 58889999999999999999999999999999 6654334667
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC----CcCCCchhhhccccchhhhhcc
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK----LKNITNEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~----~~~~~~~~~~~~~~~~~al~~e 146 (147)
.+.+.++|++.+++|+.+++++++.++|.|.+.+.|+||++||..+. .+|..++.+...|.. ++++|
T Consensus 102 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~Y~~sK~a~~~~~~--~la~e 172 (260)
T PRK12823 102 EEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGINRVPYSAAKGGVNALTA--SLAFE 172 (260)
T ss_pred hhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCCCCCccHHHHHHHHHHHH--HHHHH
Confidence 78899999999999999999999999999988777899999998753 234444566667666 55544
No 49
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.84 E-value=3.1e-20 Score=131.10 Aligned_cols=140 Identities=16% Similarity=0.138 Sum_probs=114.0
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+.+.++++.+++.. +. ++..+.||++|+++++++++++.+.++++|++ +|.. ...++
T Consensus 25 ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~-~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~vI~nAG~~-~~~~~ 101 (296)
T PRK05872 25 LARRLHARGAKLALVDLEEAELAALAAELGG-DD-RVLTVVADVTDLAAMQAAAEEAVERFGGIDVVVANAGIA-SGGSV 101 (296)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-CC-cEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCcCc
Confidence 3567889999999999999888888777743 22 47777899999999999999999999999999 7765 34677
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS 146 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e 146 (147)
.+.+.++|++.+++|+.+++++++.++|.|.+. .|+||++||..+..+.+.. +.+...|.. +++.|
T Consensus 102 ~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaal~~~~~--~l~~e 173 (296)
T PRK05872 102 AQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFAN--ALRLE 173 (296)
T ss_pred ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcCCCCCchHHHHHHHHHHHHHH--HHHHH
Confidence 788999999999999999999999999999775 4899999999887765443 234455555 44443
No 50
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.83 E-value=4.9e-20 Score=128.88 Aligned_cols=142 Identities=16% Similarity=0.086 Sum_probs=115.7
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc-----
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN----- 73 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~----- 73 (147)
++.|+++|++|++++|+.+..+++.+++...+. ++.++.+|++|++++..+++++.+.++++|++ +|...+
T Consensus 27 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~ 105 (278)
T PRK08277 27 AKELARAGAKVAILDRNQEKAEAVVAEIKAAGG-EALAVKADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTD 105 (278)
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccccc
Confidence 567889999999999998888888888876654 68899999999999999999999999999999 664311
Q ss_pred ---------chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhcccc
Q 040927 74 ---------WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLS 138 (147)
Q Consensus 74 ---------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~ 138 (147)
..++.+.+.++|++.+++|+.+++.+++.++|.|.+.+.|+||++||..+..+.++. +++...++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~ 185 (278)
T PRK08277 106 NEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTKVPAYSAAKAAISNFT 185 (278)
T ss_pred cccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCCCCCCchhHHHHHHHHHHH
Confidence 134667889999999999999999999999999988877999999999887664432 34445555
Q ss_pred chhhhhcc
Q 040927 139 DWMRCRRS 146 (147)
Q Consensus 139 ~~~al~~e 146 (147)
. ++++|
T Consensus 186 ~--~la~e 191 (278)
T PRK08277 186 Q--WLAVH 191 (278)
T ss_pred H--HHHHH
Confidence 5 45444
No 51
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.83 E-value=5.9e-20 Score=128.19 Aligned_cols=137 Identities=23% Similarity=0.230 Sum_probs=113.8
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+.++++.+++. ++.++.||++|++++.++++.+.+.++++|++ +|.. ...++.
T Consensus 22 a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~-~~~~~~ 95 (273)
T PRK07825 22 ARALAALGARVAIGDLDEALAKETAAELG-----LVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVM-PVGPFL 95 (273)
T ss_pred HHHHHHCCCEEEEEECCHHHHHHHHHHhc-----cceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCCccc
Confidence 56788999999999999888777666652 47788999999999999999999999999999 7766 346677
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS 146 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e 146 (147)
+.+.++|++++++|+.+++.+++.++|.|.+++.|+||++||..+..+.++. +.+...|.+ +++.|
T Consensus 96 ~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~--~l~~e 167 (273)
T PRK07825 96 DEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTD--AARLE 167 (273)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHHHHHHHHH--HHHHH
Confidence 8889999999999999999999999999998888999999999887765543 334445555 55554
No 52
>PRK06194 hypothetical protein; Provisional
Probab=99.83 E-value=3.8e-20 Score=129.94 Aligned_cols=142 Identities=21% Similarity=0.207 Sum_probs=115.6
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+.+.+++..+++...+. ++.++.+|++|.++++++++.+.+.++++|++ ||.... .++
T Consensus 22 la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~-~~~ 99 (287)
T PRK06194 22 FARIGAALGMKLVLADVQQDALDRAVAELRAQGA-EVLGVRTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAG-GLV 99 (287)
T ss_pred HHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC-CCc
Confidence 3577889999999999998888888888766554 58889999999999999999999999999999 776533 666
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCC------CeEEEEcCCCCCCcCCCc------hhhhccccchhhhhc
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDS------PRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRR 145 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~------~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~ 145 (147)
.+.+.++|+..+++|+.+++.+++.++|.|.++.. |+||++||..+..+.++. +.+...++. ++++
T Consensus 100 ~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~--~l~~ 177 (287)
T PRK06194 100 WENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSKHAVVSLTE--TLYQ 177 (287)
T ss_pred ccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcchHHHHHHHHHHHH--HHHH
Confidence 77889999999999999999999999999987654 799999999887654332 344455555 4544
Q ss_pred c
Q 040927 146 S 146 (147)
Q Consensus 146 e 146 (147)
|
T Consensus 178 e 178 (287)
T PRK06194 178 D 178 (287)
T ss_pred H
Confidence 3
No 53
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.83 E-value=6.4e-20 Score=127.03 Aligned_cols=141 Identities=18% Similarity=0.164 Sum_probs=114.6
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+ .+.+++.+.+...+. ++.++.||+++++++.++++++.+.+|++|++ +|.. ...++
T Consensus 31 ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~-~~~~~ 107 (258)
T PRK06935 31 YAVALAKAGADIIITTHG-TNWDETRRLIEKEGR-KVTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTI-RRAPL 107 (258)
T ss_pred HHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCc
Confidence 356788999999999998 566666666665554 58899999999999999999999999999998 6655 33566
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e 146 (147)
.+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+. ++.+...+.. ++++|
T Consensus 108 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~la~e 180 (258)
T PRK06935 108 LEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAGLTK--AFANE 180 (258)
T ss_pred ccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHHHHHHHHHHHH--HHHHH
Confidence 7788999999999999999999999999998887799999999887655433 3345556655 66655
No 54
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.83 E-value=8e-21 Score=124.73 Aligned_cols=137 Identities=23% Similarity=0.266 Sum_probs=114.1
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHh-hcCCccEE---ecCCCcchh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSS-QFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~g~id~l---ag~~~~~~~ 76 (147)
++++|+++|+.|+.++|+.+...++.... .+..+.+|+++++++..+..++.. .+|.+|++ ||.... .|
T Consensus 24 la~ef~~~G~~V~AtaR~~e~M~~L~~~~------gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L~NNAG~~C~-~P 96 (289)
T KOG1209|consen 24 LAKEFARNGYLVYATARRLEPMAQLAIQF------GLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLLYNNAGQSCT-FP 96 (289)
T ss_pred HHHHHHhCCeEEEEEccccchHhhHHHhh------CCeeEEeccCChHHHHHHHHHHhhCCCCceEEEEcCCCCCcc-cc
Confidence 46789999999999999987766554332 378899999999999999999988 67999999 887643 66
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhccC
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRSI 147 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e~ 147 (147)
..+.+.+.++++|++|++|.+.|++++. ++.-..+|.|||++|..+..|+|-. ++++++++. .||-|+
T Consensus 97 a~d~~i~ave~~f~vNvfG~irM~~a~~-h~likaKGtIVnvgSl~~~vpfpf~~iYsAsKAAihay~~--tLrlEl 170 (289)
T KOG1209|consen 97 ALDATIAAVEQCFKVNVFGHIRMCRALS-HFLIKAKGTIVNVGSLAGVVPFPFGSIYSASKAAIHAYAR--TLRLEL 170 (289)
T ss_pred cccCCHHHHHhhhccceeeeehHHHHHH-HHHHHccceEEEecceeEEeccchhhhhhHHHHHHHHhhh--hcEEee
Confidence 7789999999999999999999999999 5544456999999999999887644 467788887 777764
No 55
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.83 E-value=8.4e-20 Score=126.22 Aligned_cols=126 Identities=20% Similarity=0.176 Sum_probs=109.8
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+..+++.+.++..+. ++..+.+|++|+++++++++.+.+.++++|++ +|.. ...++.
T Consensus 27 a~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~-~~~~~~ 104 (255)
T PRK07523 27 AEGLAQAGAEVILNGRDPAKLAAAAESLKGQGL-SAHALAFDVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQ-FRTPLE 104 (255)
T ss_pred HHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCc-eEEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC-CCCChh
Confidence 567888999999999998888888888876654 58899999999999999999999999999999 6655 346777
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~ 129 (147)
+.+.++|++.+++|+.+++.+++.+.+.|.+++.|+||++||..+..+.++
T Consensus 105 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~ 155 (255)
T PRK07523 105 DFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPG 155 (255)
T ss_pred hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCC
Confidence 889999999999999999999999999998877799999999887665443
No 56
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.83 E-value=3.9e-20 Score=130.60 Aligned_cols=120 Identities=28% Similarity=0.365 Sum_probs=106.9
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHh-cCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKN-SGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~ 76 (147)
+++.|+.+|++|++..|+.+..++..+++.. ....++.++.||+++.+++.++.+++.+.++++|++ ||+.....
T Consensus 51 ta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~ldvLInNAGV~~~~~- 129 (314)
T KOG1208|consen 51 TARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEGPLDVLINNAGVMAPPF- 129 (314)
T ss_pred HHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCCCccEEEeCcccccCCc-
Confidence 3688999999999999999999999999986 333458889999999999999999999999999999 99874433
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~ 123 (147)
..+.|.++.+|.+|+.|+|.|++.++|.|+.+..++|||+||..+
T Consensus 130 --~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~ 174 (314)
T KOG1208|consen 130 --SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG 174 (314)
T ss_pred --ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc
Confidence 567789999999999999999999999999887799999999887
No 57
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.83 E-value=8.4e-20 Score=126.16 Aligned_cols=125 Identities=16% Similarity=0.146 Sum_probs=108.7
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+.++++.+++...+. ++..+.+|++|++++.++++.+.+.++++|++ +|.. ...++.
T Consensus 26 a~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~ 103 (254)
T PRK08085 26 ATGLAEYGAEIIINDITAERAELAVAKLRQEGI-KAHAAPFNVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQ-RRHPFT 103 (254)
T ss_pred HHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCC-eEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcC-CCCChh
Confidence 567889999999999998888888888876654 57888999999999999999999999999999 6654 335677
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~ 128 (147)
+.+.++|++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.+
T Consensus 104 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~ 153 (254)
T PRK08085 104 EFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRD 153 (254)
T ss_pred hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCC
Confidence 88999999999999999999999999999877778999999987765543
No 58
>PLN02253 xanthoxin dehydrogenase
Probab=99.83 E-value=5.9e-20 Score=128.59 Aligned_cols=141 Identities=21% Similarity=0.172 Sum_probs=113.6
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc-chhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN-WYKM 77 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~-~~~~ 77 (147)
++.|+++|++|++++|+.+..+++.+++.. + .++.++.+|++|+++++++++.+.+.+|++|++ +|.... ..++
T Consensus 35 a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~ 112 (280)
T PLN02253 35 VRLFHKHGAKVCIVDLQDDLGQNVCDSLGG-E-PNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDI 112 (280)
T ss_pred HHHHHHcCCEEEEEeCCHHHHHHHHHHhcC-C-CceEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCc
Confidence 567889999999999988777777666632 2 258899999999999999999999999999999 665422 2456
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC------Cchhhhccccchhhhhcc
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI------TNEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~------~~~~~~~~~~~~~al~~e 146 (147)
.+.+.++|++++++|+.+++++++.++|.|.+.++|+||+++|..+..+.+ .++.+.+.++. ++++|
T Consensus 113 ~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e 185 (280)
T PLN02253 113 RNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAVLGLTR--SVAAE 185 (280)
T ss_pred ccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHHHHHHHHHHHH--HHHHH
Confidence 788999999999999999999999999999877778999999988765543 23445556665 55554
No 59
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=99.83 E-value=9.8e-20 Score=129.56 Aligned_cols=122 Identities=20% Similarity=0.092 Sum_probs=102.3
Q ss_pred ccccccCC-cEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 2 KRSNQVHY-SMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 2 ~~~l~~~G-~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
++.|+++| ++|++++|+.+.++++.+++...+. ++.++.+|++|.++++++++++.+.++++|++ ||...+..+.
T Consensus 20 a~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~ 98 (314)
T TIGR01289 20 AKALAATGEWHVIMACRDFLKAEQAAKSLGMPKD-SYTIMHLDLGSLDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKE 98 (314)
T ss_pred HHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCC-eEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCccccCccc
Confidence 56788999 9999999998888888777754433 57888999999999999999998888999999 7764332333
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC--CCeEEEEcCCCCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD--SPRIVNASSSMGK 124 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~isS~~~~ 124 (147)
.+.+.++|+.++++|+.+++++++.++|.|.+.+ .|+||++||.++.
T Consensus 99 ~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~ 147 (314)
T TIGR01289 99 PRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGN 147 (314)
T ss_pred cccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccc
Confidence 4568899999999999999999999999998763 4899999998774
No 60
>PRK07831 short chain dehydrogenase; Provisional
Probab=99.83 E-value=1.1e-19 Score=126.12 Aligned_cols=142 Identities=20% Similarity=0.193 Sum_probs=115.9
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHh-cCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKN-SGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
++.|+++|++|++++|+.+.+++..++++. .+..++..+.+|++++++++++++.+.+.+|++|++ +|.. ...++
T Consensus 35 a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~-~~~~~ 113 (262)
T PRK07831 35 ARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLG-GQTPV 113 (262)
T ss_pred HHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCc
Confidence 567889999999999998888888887765 343358889999999999999999999999999998 6754 34667
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e 146 (147)
.+.+.++|++.+++|+.+++.+++.++|.|.... .|+||+++|..+..+.++ .+++...+.. +++.|
T Consensus 114 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sKaal~~~~~--~la~e 187 (262)
T PRK07831 114 VDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTR--CSALE 187 (262)
T ss_pred ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHHHHHHHHHHHH--HHHHH
Confidence 7889999999999999999999999999998775 689999999887665433 3455666666 55544
No 61
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.83 E-value=1.4e-19 Score=126.12 Aligned_cols=141 Identities=20% Similarity=0.224 Sum_probs=117.1
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+.++++.+++...+. ++.++.||++|++++..+++.+.+.++++|++ +|.. ...++.
T Consensus 17 a~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~lI~~ag~~-~~~~~~ 94 (270)
T PRK05650 17 ALRWAREGWRLALADVNEEGGEETLKLLREAGG-DGFYQRCDVRDYSQLTALAQACEEKWGGIDVIVNNAGVA-SGGFFE 94 (270)
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcc
Confidence 567889999999999999888888888877665 68899999999999999999999999999999 6655 335667
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCch------hhhccccchhhhhcc
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNE------WAKGVLSDWMRCRRS 146 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~------~~~~~~~~~~al~~e 146 (147)
+.+.++|++.+++|+.+++.+++.++|.|.+.+.++||++||..+..+.+... .+...|.. +|+.|
T Consensus 95 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~~--~l~~e 166 (270)
T PRK05650 95 ELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSE--TLLVE 166 (270)
T ss_pred cCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHHHHH--HHHHH
Confidence 88899999999999999999999999999887778999999998877654433 34444554 55544
No 62
>PRK09242 tropinone reductase; Provisional
Probab=99.83 E-value=1.4e-19 Score=125.26 Aligned_cols=127 Identities=20% Similarity=0.122 Sum_probs=108.9
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcC-CCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSG-CDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
++.|+++|++|++++|+.+.+++..+++.... +.++..+.+|+++++++..+++.+.+.++++|++ +|.. ...++
T Consensus 26 a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~-~~~~~ 104 (257)
T PRK09242 26 AREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGGN-IRKAA 104 (257)
T ss_pred HHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCh
Confidence 56788899999999999988888888886651 2268889999999999999999999999999999 6654 33566
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~ 129 (147)
.+.+.++|++.+++|+.+++.++++++|+|.+++.++||++||..+..+.++
T Consensus 105 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~ 156 (257)
T PRK09242 105 IDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRS 156 (257)
T ss_pred hhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCC
Confidence 6889999999999999999999999999998877789999999988766433
No 63
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=99.83 E-value=5.2e-20 Score=129.98 Aligned_cols=141 Identities=11% Similarity=-0.016 Sum_probs=109.0
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhc----------CC--CceEEEEecC--CC------------------HH
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNS----------GC--DNVIFHLLDV--TD------------------PA 48 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~----------~~--~~~~~~~~D~--~~------------------~~ 48 (147)
+++.|++.|++|++ +|+.+.++++..++... +. .....+.+|+ ++ ++
T Consensus 27 ~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (303)
T PLN02730 27 IAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTPEDVPEDVKTNKRYAGSSNW 105 (303)
T ss_pred HHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCccccCchhhhcccccccCCHH
Confidence 36789999999999 78888888877666531 10 0146788898 43 34
Q ss_pred HHHHHHHHHHhhcCCccEE---ecCCC-cchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927 49 SVDSLVHFVSSQFGKLDIL---GGLPD-NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124 (147)
Q Consensus 49 ~~~~~~~~~~~~~g~id~l---ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~ 124 (147)
+++++++++.+++|++|++ ||... ...++.+.+.++|++++++|+.+++.+++.++|.|.+. |+|||+||.++.
T Consensus 106 ~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~~~--G~II~isS~a~~ 183 (303)
T PLN02730 106 TVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNPG--GASISLTYIASE 183 (303)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC--CEEEEEechhhc
Confidence 8999999999999999999 66432 23678889999999999999999999999999999764 899999998887
Q ss_pred CcCCC-------chhhhccccchhhhhcc
Q 040927 125 LKNIT-------NEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 125 ~~~~~-------~~~~~~~~~~~~al~~e 146 (147)
.+.+. ++++...|+. +|+.|
T Consensus 184 ~~~p~~~~~Y~asKaAl~~l~~--~la~E 210 (303)
T PLN02730 184 RIIPGYGGGMSSAKAALESDTR--VLAFE 210 (303)
T ss_pred CCCCCCchhhHHHHHHHHHHHH--HHHHH
Confidence 66443 2345666666 66655
No 64
>PRK06484 short chain dehydrogenase; Validated
Probab=99.82 E-value=1.2e-19 Score=136.83 Aligned_cols=138 Identities=22% Similarity=0.196 Sum_probs=112.7
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+.+.++++.+++ +. ++..+.+|++|+++++++++++.+.+|++|++ ||......++
T Consensus 285 ~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~ 360 (520)
T PRK06484 285 VADRFAAAGDRLLIIDRDAEGAKKLAEAL---GD-EHLSVQADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPS 360 (520)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC-ceeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCh
Confidence 36778999999999999988877776555 33 57788999999999999999999999999999 7765344577
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS 146 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e 146 (147)
.+.+.++|++++++|+.+++++++.++|+|. +.|+||++||.++..+.++. +++...|.. +|++|
T Consensus 361 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~--~la~e 431 (520)
T PRK06484 361 LEQSAEDFTRVYDVNLSGAFACARAAARLMS--QGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSR--SLACE 431 (520)
T ss_pred hhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc--cCCEEEEECchhhcCCCCCCchhHHHHHHHHHHHH--HHHHH
Confidence 7889999999999999999999999999993 45899999999988765443 345555555 55544
No 65
>PRK07985 oxidoreductase; Provisional
Probab=99.82 E-value=1.3e-19 Score=127.83 Aligned_cols=141 Identities=18% Similarity=0.113 Sum_probs=110.2
Q ss_pred CccccccCCcEEEEeecCh--hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcch
Q 040927 1 MKRSNQVHYSMGEATTKDE--KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWY 75 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~ 75 (147)
+++.|+++|++|++++|+. +..+++.+.+...+. ++.++.+|++|++++.++++++.+.+|++|++ +|......
T Consensus 65 ia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~ 143 (294)
T PRK07985 65 AAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGR-KAVLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIP 143 (294)
T ss_pred HHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCC-eEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCcCCC
Confidence 3577889999999988653 345555555555554 58889999999999999999999999999998 66543345
Q ss_pred hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927 76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e 146 (147)
++.+.+.++|++.+++|+.+++.+++.++|+|.+ +|+||++||..+..+.+. ++++...++. ++++|
T Consensus 144 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~iSS~~~~~~~~~~~~Y~asKaal~~l~~--~la~e 216 (294)
T PRK07985 144 DIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYAATKAAILNYSR--GLAKQ 216 (294)
T ss_pred ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc--CCEEEEECCchhccCCCCcchhHHHHHHHHHHHH--HHHHH
Confidence 6778899999999999999999999999999965 389999999988765443 2345555555 55544
No 66
>PRK06128 oxidoreductase; Provisional
Probab=99.82 E-value=1.6e-19 Score=127.74 Aligned_cols=140 Identities=21% Similarity=0.176 Sum_probs=112.2
Q ss_pred ccccccCCcEEEEeecChh--hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927 2 KRSNQVHYSMGEATTKDEK--RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~--~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~ 76 (147)
++.|+++|++|++++++.+ ..+++.+.++..+. ++.++.||++|+++++++++++.+.++++|++ +|......+
T Consensus 72 a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~ 150 (300)
T PRK06128 72 AIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGR-KAVALPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKD 150 (300)
T ss_pred HHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCC
Confidence 5678899999999887543 45556666766654 68899999999999999999999999999999 776534456
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e 146 (147)
+.+.+.++|++.+++|+.+++++++.++|.|.+ +++||++||..+..+.+. ++.+...|+. +|++|
T Consensus 151 ~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~asK~a~~~~~~--~la~e 222 (300)
T PRK06128 151 IADITTEQFDATFKTNVYAMFWLCKAAIPHLPP--GASIINTGSIQSYQPSPTLLDYASTKAAIVAFTK--ALAKQ 222 (300)
T ss_pred hhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--CCEEEEECCccccCCCCCchhHHHHHHHHHHHHH--HHHHH
Confidence 778899999999999999999999999999875 379999999987765433 3455666666 56554
No 67
>PRK08643 acetoin reductase; Validated
Probab=99.82 E-value=3.1e-19 Score=123.42 Aligned_cols=127 Identities=24% Similarity=0.199 Sum_probs=108.8
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+.+.++++..++...+. ++.++.+|++|++++.++++++.++++++|++ +|.. ...++
T Consensus 18 la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~ 95 (256)
T PRK08643 18 IAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGG-KAIAVKADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVA-PTTPI 95 (256)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCc
Confidence 3567889999999999998888888888876654 58889999999999999999999999999998 6654 33567
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~ 129 (147)
.+.+.++|++.+++|+.+++.+++.+++.|.+.+ .++||++||..+..+.++
T Consensus 96 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~ 148 (256)
T PRK08643 96 ETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPE 148 (256)
T ss_pred ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCC
Confidence 7888999999999999999999999999997654 479999999988766543
No 68
>PRK06398 aldose dehydrogenase; Validated
Probab=99.82 E-value=6.9e-20 Score=127.02 Aligned_cols=130 Identities=19% Similarity=0.170 Sum_probs=104.4
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.... .++.++.||++|+++++++++++.+.++++|++ +|.. ...++.
T Consensus 23 a~~l~~~G~~Vi~~~r~~~~~------------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag~~-~~~~~~ 89 (258)
T PRK06398 23 VNRLKEEGSNVINFDIKEPSY------------NDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIE-SYGAIH 89 (258)
T ss_pred HHHHHHCCCeEEEEeCCcccc------------CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcc
Confidence 566778888888888775321 147789999999999999999999999999999 7765 446778
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e 146 (147)
+.+.++|++.+++|+.+++.+++.++|+|.+++.|+||++||..+..+.+. ++.+...+.. ++++|
T Consensus 90 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~~~~--~la~e 161 (258)
T PRK06398 90 AVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTR--SIAVD 161 (258)
T ss_pred cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHHHHHHHHH--HHHHH
Confidence 889999999999999999999999999998877799999999887765433 3345555555 44444
No 69
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.82 E-value=1.8e-19 Score=127.14 Aligned_cols=141 Identities=19% Similarity=0.192 Sum_probs=111.9
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+.++++.+++...+. ++.++.+|++|++++.++++.+.+.+|++|++ +|.... .++.
T Consensus 57 a~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~li~~AG~~~~-~~~~ 134 (293)
T PRK05866 57 AEQFARRGATVVAVARREDLLDAVADRITRAGG-DAMAVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIR-RPLA 134 (293)
T ss_pred HHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC-cchh
Confidence 567889999999999999888888888876654 58899999999999999999999999999999 665522 3333
Q ss_pred cc--cHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc-------CCCchhhhccccchhhhhcc
Q 040927 79 TQ--TYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK-------NITNEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 79 ~~--~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-------~~~~~~~~~~~~~~~al~~e 146 (147)
+. +.++++..+++|+.|++.+++.++|.|.+.+.|+||++||.++..+ +..++++...|.. +++.|
T Consensus 135 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~Y~asKaal~~l~~--~la~e 209 (293)
T PRK05866 135 ESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYNASKAALSAVSR--VIETE 209 (293)
T ss_pred hccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcchHHHHHHHHHHHHH--HHHHH
Confidence 32 4578999999999999999999999998887899999999765432 2223345555655 55554
No 70
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.82 E-value=2.8e-19 Score=123.68 Aligned_cols=127 Identities=17% Similarity=0.169 Sum_probs=108.7
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+.+.++++.+++...+. ++..+.+|++|+++++.+++++.+.++++|++ +|...+..++
T Consensus 21 la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~ 99 (258)
T PRK07890 21 LAVRAARAGADVVLAARTAERLDEVAAEIDDLGR-RALAVPTDITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPL 99 (258)
T ss_pred HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCC-ceEEEecCCCCHHHHHHHHHHHHHHcCCccEEEECCccCCCCCCc
Confidence 3567889999999999998888888888876554 68899999999999999999999999999999 6654344567
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~ 129 (147)
.+.+.++|++.+++|+.+++.+++.+.+.|.+.. ++||++||..+..+.++
T Consensus 100 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~ii~~sS~~~~~~~~~ 150 (258)
T PRK07890 100 ADADFAHWRAVIELNVLGTLRLTQAFTPALAESG-GSIVMINSMVLRHSQPK 150 (258)
T ss_pred ccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CEEEEEechhhccCCCC
Confidence 7888999999999999999999999999997654 79999999887665443
No 71
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.82 E-value=9e-20 Score=129.69 Aligned_cols=123 Identities=20% Similarity=0.210 Sum_probs=103.8
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcC-CCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSG-CDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~ 76 (147)
+++.|+++|++|++++|+.+++++..+++.... ..++.++.||++|.++++++++++.+.++++|++ ||.... +
T Consensus 30 ~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~iD~li~nAG~~~~--~ 107 (313)
T PRK05854 30 LARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRPIHLLINNAGVMTP--P 107 (313)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCccccC--C
Confidence 357789999999999999988888888886543 2258889999999999999999999999999999 776532 2
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK 126 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~ 126 (147)
..+.+.+.|+.++++|+.|++.+++.++|.|.+. .++||++||.++..+
T Consensus 108 ~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~ 156 (313)
T PRK05854 108 ERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRG 156 (313)
T ss_pred ccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCC
Confidence 3356778999999999999999999999999765 589999999887543
No 72
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.82 E-value=2e-19 Score=125.63 Aligned_cols=124 Identities=19% Similarity=0.167 Sum_probs=104.2
Q ss_pred CccccccCCcEEEEeecChhh-------HHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecC
Q 040927 1 MKRSNQVHYSMGEATTKDEKR-------GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGL 70 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~ 70 (147)
+++.|+++|++|++++|+.+. ++++.+++...+. ++.++.+|+++++++.++++++.+.++++|++ +|.
T Consensus 22 ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~ 100 (273)
T PRK08278 22 IALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGG-QALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASA 100 (273)
T ss_pred HHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 357788999999999997542 4555666666654 68899999999999999999999999999999 665
Q ss_pred CCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc
Q 040927 71 PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK 126 (147)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~ 126 (147)
. ...++.+.+.++|++.+++|+.+++.+++.++|.|.++++|+|+++||..+..+
T Consensus 101 ~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~ 155 (273)
T PRK08278 101 I-NLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDP 155 (273)
T ss_pred c-CCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccc
Confidence 4 335677889999999999999999999999999998887789999999876554
No 73
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.82 E-value=3.3e-19 Score=123.25 Aligned_cols=126 Identities=16% Similarity=0.150 Sum_probs=110.2
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+.++++.++++..+. ++.++.||++|++++.++++++.+.++++|++ +|.. ...++.
T Consensus 28 a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~ 105 (256)
T PRK06124 28 ARALAGAGAHVLVNGRNAATLEAAVAALRAAGG-AAEALAFDIADEEAVAAAFARIDAEHGRLDILVNNVGAR-DRRPLA 105 (256)
T ss_pred HHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC-CCCChh
Confidence 567888999999999998888888888877665 58899999999999999999999999999999 6655 336677
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~ 129 (147)
+.+.++|++.+++|+.+++.+.+.++|.|.+++.++||++||..+..+.+.
T Consensus 106 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~ 156 (256)
T PRK06124 106 ELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAG 156 (256)
T ss_pred hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCC
Confidence 888999999999999999999999999998877899999999988766543
No 74
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.82 E-value=9e-20 Score=130.00 Aligned_cols=143 Identities=11% Similarity=0.056 Sum_probs=108.6
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcC-CCceEEEEecCCCHHHHHHHHHHHHhhcCC--ccEE---ecCCCc-
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSG-CDNVIFHLLDVTDPASVDSLVHFVSSQFGK--LDIL---GGLPDN- 73 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~--id~l---ag~~~~- 73 (147)
+++.|+++|++|++++|+.+.++++.+++.... ..++..+.+|+++ ++.+.++++.+.++. +|++ ||...+
T Consensus 69 lA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~~~~didilVnnAG~~~~~ 146 (320)
T PLN02780 69 FAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETIEGLDVGVLINNVGVSYPY 146 (320)
T ss_pred HHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHhcCCCccEEEEecCcCCCC
Confidence 367889999999999999999999988887643 2357888999985 334445555555554 5577 776532
Q ss_pred chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCC-c-CCC------chhhhccccchhhhhc
Q 040927 74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL-K-NIT------NEWAKGVLSDWMRCRR 145 (147)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~-~-~~~------~~~~~~~~~~~~al~~ 145 (147)
..++.+.+.+++++.+++|+.|++.+++.++|.|.++++|+||++||.++.. + .|. ++++...|+. +|+.
T Consensus 147 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y~aSKaal~~~~~--~L~~ 224 (320)
T PLN02780 147 ARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAATKAYIDQFSR--CLYV 224 (320)
T ss_pred CcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHHHHHHHHHHHHHH--HHHH
Confidence 2456788999999999999999999999999999988889999999988854 2 222 2456667776 6776
Q ss_pred cC
Q 040927 146 SI 147 (147)
Q Consensus 146 e~ 147 (147)
|+
T Consensus 225 El 226 (320)
T PLN02780 225 EY 226 (320)
T ss_pred HH
Confidence 63
No 75
>PRK09186 flagellin modification protein A; Provisional
Probab=99.81 E-value=2.8e-19 Score=123.56 Aligned_cols=125 Identities=14% Similarity=0.135 Sum_probs=104.3
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhc-CCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC--cc
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNS-GCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD--NW 74 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~--~~ 74 (147)
+++.|+++|++|++++|+.+.++++.+++... +...+.++.||++|++++.++++.+.+.++++|++ ||... ..
T Consensus 20 ~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~ 99 (256)
T PRK09186 20 LVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYG 99 (256)
T ss_pred HHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECCcccccccc
Confidence 35778899999999999988888888887543 33246677999999999999999999999999999 55321 12
Q ss_pred hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCC
Q 040927 75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL 125 (147)
Q Consensus 75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~ 125 (147)
.++.+.+.++|+..+++|+.+++.+++.++|.|.+++.++||++||..+..
T Consensus 100 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~ 150 (256)
T PRK09186 100 KKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVV 150 (256)
T ss_pred CccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhc
Confidence 456788999999999999999999999999999887778999999987653
No 76
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.81 E-value=1.3e-19 Score=125.46 Aligned_cols=137 Identities=19% Similarity=0.131 Sum_probs=105.7
Q ss_pred ccccccCCcEEEEeecCh--hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc---
Q 040927 2 KRSNQVHYSMGEATTKDE--KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN--- 73 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~--- 73 (147)
++.|+++|++|++++|+. +.++++.+++ +. ++.++.+|++|+++++++++++.+.+|++|++ ||....
T Consensus 26 a~~la~~G~~v~l~~r~~~~~~~~~~~~~~---~~-~~~~~~~Dv~~~~~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~ 101 (256)
T PRK07889 26 ARVAQEQGAEVVLTGFGRALRLTERIAKRL---PE-PAPVLELDVTNEEHLASLADRVREHVDGLDGVVHSIGFAPQSAL 101 (256)
T ss_pred HHHHHHCCCEEEEecCccchhHHHHHHHhc---CC-CCcEEeCCCCCHHHHHHHHHHHHHHcCCCcEEEEcccccccccc
Confidence 577899999999999864 3344444443 22 47789999999999999999999999999999 776522
Q ss_pred chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC------CCchhhhccccchhhhhccC
Q 040927 74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN------ITNEWAKGVLSDWMRCRRSI 147 (147)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~------~~~~~~~~~~~~~~al~~e~ 147 (147)
..++.+.+.++|++.+++|+.+++.+++.++|+|++ +|+||++||.. ..+. ..++++...|+. +|++|+
T Consensus 102 ~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~~-~~~~~~~~~Y~asKaal~~l~~--~la~el 176 (256)
T PRK07889 102 GGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFDA-TVAWPAYDWMGVAKAALESTNR--YLARDL 176 (256)
T ss_pred CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeecc-cccCCccchhHHHHHHHHHHHH--HHHHHh
Confidence 135667889999999999999999999999999974 48999998754 2222 345567777777 666653
No 77
>PRK07832 short chain dehydrogenase; Provisional
Probab=99.81 E-value=3.9e-19 Score=124.08 Aligned_cols=126 Identities=18% Similarity=0.225 Sum_probs=106.4
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+.+++..+++...+.....++.+|++|+++++++++++.+.++++|++ +|.. ...++.
T Consensus 17 a~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~-~~~~~~ 95 (272)
T PRK07832 17 ALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDVVMNIAGIS-AWGTVD 95 (272)
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC-CCCccc
Confidence 567888999999999998888888888876654335567899999999999999999999999999 6655 346677
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccC-CCCeEEEEcCCCCCCcCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLS-DSPRIVNASSSMGKLKNI 128 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~~~ 128 (147)
+.+.++|+..+++|+.+++.+++.++|.|.+. ..|+||++||..+..+.+
T Consensus 96 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~ 146 (272)
T PRK07832 96 RLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALP 146 (272)
T ss_pred cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCC
Confidence 89999999999999999999999999999764 358999999988765543
No 78
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=99.81 E-value=2.5e-19 Score=123.84 Aligned_cols=140 Identities=14% Similarity=0.084 Sum_probs=109.4
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++++. .++..+++...+. ++..+.+|++|.++++++++++.++++++|++ ||.. ...++
T Consensus 26 ~a~~l~~~G~~vv~~~~~~--~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~li~~Ag~~-~~~~~ 101 (253)
T PRK08993 26 MALGLAEAGCDIVGINIVE--PTETIEQVTALGR-RFLSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLI-RREDA 101 (253)
T ss_pred HHHHHHHCCCEEEEecCcc--hHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC-CCCCc
Confidence 3567889999999887753 2445555655543 58889999999999999999999999999998 7765 33567
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCC------Cchhhhccccchhhhhcc
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNI------TNEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~------~~~~~~~~~~~~~al~~e 146 (147)
.+.+.++|++.+++|+.+++.+++.++|.|.+++ +|+||++||..+..+.+ .++.+...++. ++++|
T Consensus 102 ~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~--~la~e 175 (253)
T PRK08993 102 IEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTR--LMANE 175 (253)
T ss_pred ccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHHHHHHHHHHH--HHHHH
Confidence 7888999999999999999999999999997753 58999999988766543 23445555555 55544
No 79
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.81 E-value=4.4e-19 Score=121.63 Aligned_cols=127 Identities=17% Similarity=0.150 Sum_probs=109.1
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+.+..+++.+++...+. ++.++.+|++|++++.++++.+.+.++++|++ +|.. ...++
T Consensus 22 la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~-~~~~~ 99 (241)
T PRK07454 22 TALAFAKAGWDLALVARSQDALEALAAELRSTGV-KAAAYSIDLSNPEAIAPGIAELLEQFGCPDVLINNAGMA-YTGPL 99 (241)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCC-cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcc-CCCch
Confidence 3567889999999999998888888777776554 58899999999999999999999999999999 6655 33566
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~ 129 (147)
.+.+.++|+..+++|+.+++.+++.++|.|.+++.++||++||..+..+.+.
T Consensus 100 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~ 151 (241)
T PRK07454 100 LEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQ 151 (241)
T ss_pred hhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCC
Confidence 7788999999999999999999999999998877799999999887665443
No 80
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.81 E-value=3.4e-19 Score=123.39 Aligned_cols=125 Identities=16% Similarity=0.126 Sum_probs=106.2
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCC-CceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGC-DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
++.|+++|++|++++|+...+++..+++....+ .++.++.||++|++++.++++++.+.++++|++ +|.. ...++
T Consensus 19 a~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vv~~ag~~-~~~~~ 97 (259)
T PRK12384 19 CHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYNAGIA-KAAFI 97 (259)
T ss_pred HHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCc
Confidence 567889999999999998888877777765432 358899999999999999999999999999998 6655 33567
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKN 127 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~ 127 (147)
.+.+.++|++.+++|+.+++++.+.++|.|.+.+ .++||++||..+..+.
T Consensus 98 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~ 148 (259)
T PRK12384 98 TDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGS 148 (259)
T ss_pred ccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCC
Confidence 7889999999999999999999999999998765 6899999998776543
No 81
>PRK06125 short chain dehydrogenase; Provisional
Probab=99.81 E-value=5.2e-19 Score=122.56 Aligned_cols=138 Identities=16% Similarity=0.115 Sum_probs=110.6
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+.+++..+++....+.++.++.+|++|++++.++++. ++++|++ +|.. ...++.
T Consensus 24 a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~----~g~id~lv~~ag~~-~~~~~~ 98 (259)
T PRK06125 24 AEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE----AGDIDILVNNAGAI-PGGGLD 98 (259)
T ss_pred HHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----hCCCCEEEECCCCC-CCCCcc
Confidence 5668889999999999998888888888765433688999999999999887754 4889998 6765 336777
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e 146 (147)
+.+.++|+.++++|+.+++++++.++|.|.+++.|+||++||..+..+.+. .+.+...+.. +++.|
T Consensus 99 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ask~al~~~~~--~la~e 170 (259)
T PRK06125 99 DVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNAALMAFTR--ALGGK 170 (259)
T ss_pred cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHHHHHHHHHHH--HHHHH
Confidence 899999999999999999999999999998877789999999888765433 2345555555 45443
No 82
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.81 E-value=6.5e-19 Score=121.82 Aligned_cols=141 Identities=16% Similarity=0.161 Sum_probs=114.2
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+.+..+++.+++...+. ++.++.+|++|.+++.+++..+.+.++++|++ +|...+ .++
T Consensus 27 la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~ag~~~~-~~~ 104 (255)
T PRK06113 27 IAITFATAGASVVVSDINADAANHVVDEIQQLGG-QAFACRCDITSEQELSALADFALSKLGKVDILVNNAGGGGP-KPF 104 (255)
T ss_pred HHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC-CCC
Confidence 3567889999999999998888888888876654 58889999999999999999999999999999 665422 333
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS 146 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e 146 (147)
+.+.++|++.+++|+.+++++++.++|+|.+.+.++||++||..+..+.++. +++...++. ++++|
T Consensus 105 -~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~~ 176 (255)
T PRK06113 105 -DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVR--NMAFD 176 (255)
T ss_pred -CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHHHHHHHHHHH--HHHHH
Confidence 5788999999999999999999999999987767899999998887665432 344555555 45443
No 83
>PRK06484 short chain dehydrogenase; Validated
Probab=99.81 E-value=4.9e-19 Score=133.50 Aligned_cols=140 Identities=19% Similarity=0.174 Sum_probs=113.6
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC-cchh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD-NWYK 76 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~-~~~~ 76 (147)
+++.|+++|++|++++|+.+.+++..+++ +. ++..+.+|++|+++++++++.+.+.++++|++ +|... ...+
T Consensus 21 ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~ 96 (520)
T PRK06484 21 ACQRFARAGDQVVVADRNVERARERADSL---GP-DHHALAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTA 96 (520)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC-ceeEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCcc
Confidence 35778999999999999988777766655 33 57889999999999999999999999999999 67632 2356
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCC-eEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSP-RIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e 146 (147)
+.+.+.++|++.+++|+.+++.++++++|+|.+++.| +||++||..+..+.+. ++++...|.. ++++|
T Consensus 97 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~--~la~e 171 (520)
T PRK06484 97 TLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTR--SLACE 171 (520)
T ss_pred cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHHHHHHHHH--HHHHH
Confidence 6788999999999999999999999999999776555 9999999988776543 3345556665 55555
No 84
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.80 E-value=6.1e-19 Score=122.43 Aligned_cols=122 Identities=22% Similarity=0.226 Sum_probs=101.8
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+.+.++++.+++ +. ++.++.||++|++++.++++.+.+.++++|++ +|.... ..+
T Consensus 22 ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~-~~~ 96 (261)
T PRK08265 22 VARALVAAGARVAIVDIDADNGAAVAASL---GE-RARFIATDITDDAAIERAVATVVARFGRVDILVNLACTYLD-DGL 96 (261)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CC-eeEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC-CcC
Confidence 35678899999999999987777766655 32 58889999999999999999999999999999 665422 222
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~ 129 (147)
+.+.++|++.+++|+.+++.+++.++|.|. ++.|+||++||.++..+.+.
T Consensus 97 -~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~~~~ 146 (261)
T PRK08265 97 -ASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQTG 146 (261)
T ss_pred -cCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhccCCCC
Confidence 568899999999999999999999999997 55689999999988766443
No 85
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.80 E-value=3.6e-19 Score=126.25 Aligned_cols=141 Identities=16% Similarity=0.169 Sum_probs=112.5
Q ss_pred CccccccCCcEEEEeecC-hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927 1 MKRSNQVHYSMGEATTKD-EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~ 76 (147)
+++.|+++|++|++++++ .+..++..+++...+. ++.++.+|++|++++.++++.+.+ +|++|++ +|.... .+
T Consensus 28 ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~-~~~~~~~Dv~d~~~~~~~~~~~~~-~g~iD~li~nAG~~~~-~~ 104 (306)
T PRK07792 28 EALGLARLGATVVVNDVASALDASDVLDEIRAAGA-KAVAVAGDISQRATADELVATAVG-LGGLDIVVNNAGITRD-RM 104 (306)
T ss_pred HHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCC-eEEEEeCCCCCHHHHHHHHHHHHH-hCCCCEEEECCCCCCC-CC
Confidence 357789999999999875 4566777788877665 688999999999999999999988 9999999 776633 56
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccC-------CCCeEEEEcCCCCCCcCCC------chhhhccccchhhh
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLS-------DSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRC 143 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-------~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al 143 (147)
+.+.+.++|+..+++|+.+++++++.+.|+|.+. ..|+||++||.++..+.+. .+.+...++. ++
T Consensus 105 ~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~--~l 182 (306)
T PRK07792 105 LFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITALTL--SA 182 (306)
T ss_pred cccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCCchHHHHHHHHHHHHH--HH
Confidence 6778899999999999999999999999998643 1379999999887765433 3345555555 55
Q ss_pred hcc
Q 040927 144 RRS 146 (147)
Q Consensus 144 ~~e 146 (147)
++|
T Consensus 183 a~e 185 (306)
T PRK07792 183 ARA 185 (306)
T ss_pred HHH
Confidence 554
No 86
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.80 E-value=1.1e-18 Score=119.57 Aligned_cols=127 Identities=24% Similarity=0.270 Sum_probs=108.8
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+.+..++..+++...+. ++.++.+|+++++++.++++++.+.++++|++ +|.. ...++
T Consensus 23 l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~ 100 (239)
T PRK07666 23 VAIALAKEGVNVGLLARTEENLKAVAEEVEAYGV-KVVIATADVSDYEEVTAAIEQLKNELGSIDILINNAGIS-KFGKF 100 (239)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC-eEEEEECCCCCHHHHHHHHHHHHHHcCCccEEEEcCccc-cCCCc
Confidence 3567889999999999998888888888866554 68899999999999999999999999999999 5654 33556
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~ 129 (147)
.+.+.++|++.+++|+.+++.+++.+.|.|.+++.+++|++||..+..+.++
T Consensus 101 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~ 152 (239)
T PRK07666 101 LELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAV 152 (239)
T ss_pred ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCC
Confidence 6788899999999999999999999999998887789999999887766544
No 87
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.80 E-value=7.1e-19 Score=121.69 Aligned_cols=142 Identities=16% Similarity=0.056 Sum_probs=107.4
Q ss_pred CccccccC-CcEEEEeecChhh-HHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcch
Q 040927 1 MKRSNQVH-YSMGEATTKDEKR-GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWY 75 (147)
Q Consensus 1 ~~~~l~~~-G~~v~l~~r~~~~-~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~ 75 (147)
++++|+++ |++|++++|+.+. ++++.+++...+..++.++.+|++|++++.++++++.+ ++++|++ +|...+..
T Consensus 24 la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~g~id~li~~ag~~~~~~ 102 (253)
T PRK07904 24 ICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-GGDVDVAIVAFGLLGDAE 102 (253)
T ss_pred HHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-cCCCCEEEEeeecCCchh
Confidence 35677777 4999999999876 88888888776544688999999999999999999886 4899987 56542211
Q ss_pred hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927 76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e 146 (147)
....+.+++.+.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++ ++++...|.. +++.|
T Consensus 103 -~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKaa~~~~~~--~l~~e 176 (253)
T PRK07904 103 -ELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKAGLDGFYL--GLGEA 176 (253)
T ss_pred -hcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHHHHHHHHH--HHHHH
Confidence 11234556678899999999999999999999888899999999887654332 2344455544 55544
No 88
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.80 E-value=5.6e-19 Score=123.63 Aligned_cols=135 Identities=24% Similarity=0.227 Sum_probs=109.1
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhc-CCccEE---ecCCCcchhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQF-GKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~l---ag~~~~~~~~ 77 (147)
++.|+++|++|++++|+.+.++++. .. .+.++.+|++|+++++++++.+.+.+ +++|++ +|.. ...++
T Consensus 21 a~~l~~~G~~Vi~~~r~~~~~~~l~----~~---~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~Ag~~-~~~~~ 92 (277)
T PRK05993 21 ARALQSDGWRVFATCRKEEDVAALE----AE---GLEAFQLDYAEPESIAALVAQVLELSGGRLDALFNNGAYG-QPGAV 92 (277)
T ss_pred HHHHHHCCCEEEEEECCHHHHHHHH----HC---CceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEECCCcC-CCCCc
Confidence 5678899999999999987665432 22 36788999999999999999997776 689998 6655 34667
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e 146 (147)
.+.+.++|+..+++|+.|++.+++.++|.|.+.+.|+||++||..+..+.+. ++++...|+. +||.|
T Consensus 93 ~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~l~~e 165 (277)
T PRK05993 93 EDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSL--TLRME 165 (277)
T ss_pred ccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHHHHHH--HHHHH
Confidence 7889999999999999999999999999999888899999999988766443 3455666666 66654
No 89
>PRK06182 short chain dehydrogenase; Validated
Probab=99.80 E-value=7.1e-19 Score=122.79 Aligned_cols=135 Identities=23% Similarity=0.274 Sum_probs=108.4
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+.++++. .. ++.++.+|++|+++++++++++.+.++++|++ +|.. ...++.
T Consensus 20 a~~l~~~G~~V~~~~r~~~~l~~~~----~~---~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ag~~-~~~~~~ 91 (273)
T PRK06182 20 ARRLAAQGYTVYGAARRVDKMEDLA----SL---GVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYG-SYGAIE 91 (273)
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHHH----hC---CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcC-CCCchh
Confidence 5678889999999999987655432 11 37789999999999999999999999999999 6765 446777
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS 146 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e 146 (147)
+.+.++|+..+++|+.+++.+++.++|.|++.+.|+||++||..+..+.+.. +.+...|.. +++.|
T Consensus 92 ~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~--~l~~e 163 (273)
T PRK06182 92 DVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFSD--ALRLE 163 (273)
T ss_pred hCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHHHHHHH--HHHHH
Confidence 8899999999999999999999999999988877899999998876554332 344455554 45543
No 90
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.80 E-value=8.9e-19 Score=120.04 Aligned_cols=144 Identities=15% Similarity=0.123 Sum_probs=115.6
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCC--HHHHHHHHHHHHhhc-CCccEE---ecCCCcc
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTD--PASVDSLVHFVSSQF-GKLDIL---GGLPDNW 74 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~-g~id~l---ag~~~~~ 74 (147)
+++.|+++|++|++++|+.+.+++..+++...+......+.+|+++ .+++.++++++.+.+ +.+|++ +|.....
T Consensus 22 la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~ 101 (239)
T PRK08703 22 VAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYAL 101 (239)
T ss_pred HHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHhCCCCCEEEEeccccccC
Confidence 3567888999999999999888888888876554357788999986 568899999998888 789999 6654344
Q ss_pred hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC------Cchhhhccccchhhhhcc
Q 040927 75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI------TNEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~------~~~~~~~~~~~~~al~~e 146 (147)
.++.+.+.++|++.+++|+.+++.+++.++|.|.+.+.+++|++||..+..+.+ .++.+...++. ++++|
T Consensus 102 ~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~~~~~~--~la~e 177 (239)
T PRK08703 102 SPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGASKAALNYLCK--VAADE 177 (239)
T ss_pred CCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchHHhHHHHHHHHH--HHHHH
Confidence 567788999999999999999999999999999887778999999988776543 33455556655 55544
No 91
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.80 E-value=3.4e-19 Score=123.75 Aligned_cols=138 Identities=18% Similarity=0.120 Sum_probs=107.8
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+.++++.+++ + .++.++.+|++|+++++++++++.+.++++|++ +|......++.
T Consensus 23 a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~ 98 (263)
T PRK06200 23 VERFLAEGARVAVLERSAEKLASLRQRF---G-DHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLV 98 (263)
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHHHHHh---C-CcceEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCcccCCCcc
Confidence 5678899999999999988777665554 2 257889999999999999999999999999999 77543334444
Q ss_pred cccHHH----HHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927 79 TQTYEL----AEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 79 ~~~~~~----~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e 146 (147)
+.+.++ |++++++|+.+++.+++.++|.|.+. +|+||++||..+..+.++ ++++...+.. ++++|
T Consensus 99 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e 173 (263)
T PRK06200 99 DIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVR--QLAYE 173 (263)
T ss_pred cCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-CCEEEEECChhhcCCCCCCchhHHHHHHHHHHHH--HHHHH
Confidence 555554 89999999999999999999998765 489999999888765433 3445555555 55544
No 92
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.80 E-value=1.1e-18 Score=120.71 Aligned_cols=126 Identities=17% Similarity=0.099 Sum_probs=103.6
Q ss_pred CccccccCCcEEEEeecC-----------hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE--
Q 040927 1 MKRSNQVHYSMGEATTKD-----------EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL-- 67 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l-- 67 (147)
+++.|+++|++|++++|+ ......+.+++...+. ++.++.+|+++++++..+++.+.+.++++|++
T Consensus 23 la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~ 101 (256)
T PRK12748 23 VCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGV-RCEHMEIDLSQPYAPNRVFYAVSERLGDPSILIN 101 (256)
T ss_pred HHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 367888999999999987 2222234555655554 68899999999999999999999999999998
Q ss_pred -ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927 68 -GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128 (147)
Q Consensus 68 -ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~ 128 (147)
+|.. ...++.+.+.+++++.+++|+.+++.+++.++|.|.+...++||++||..+..+.+
T Consensus 102 ~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~ 162 (256)
T PRK12748 102 NAAYS-THTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMP 162 (256)
T ss_pred CCCcC-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCC
Confidence 6654 34667788899999999999999999999999999877778999999988766544
No 93
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.80 E-value=9.6e-19 Score=120.47 Aligned_cols=143 Identities=17% Similarity=0.177 Sum_probs=115.0
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC--cch
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD--NWY 75 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~--~~~ 75 (147)
+++.|+++|++|++++|+.+..+++.+++...+. ++..+.+|++|.++++++++.+.+.++++|++ +|... ...
T Consensus 22 la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~ 100 (250)
T PRK07774 22 YAEALAREGASVVVADINAEGAERVAKQIVADGG-TAIAVQVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLD 100 (250)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCCC
Confidence 3577889999999999998777777777766554 57888999999999999999999999999999 66542 234
Q ss_pred hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC---CCchhhhccccchhhhhcc
Q 040927 76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN---ITNEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~---~~~~~~~~~~~~~~al~~e 146 (147)
++.+.+.++|++.+++|+.+++.+++.++|.|.+.+.|+||++||..+..+. ..++.+.+.+.. ++++|
T Consensus 101 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~Y~~sK~a~~~~~~--~l~~~ 172 (250)
T PRK07774 101 LLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLYSNFYGLAKVGLNGLTQ--QLARE 172 (250)
T ss_pred ChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCCccccHHHHHHHHHHHH--HHHHH
Confidence 5667888999999999999999999999999988777899999998776543 233455566665 55544
No 94
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.80 E-value=1.3e-18 Score=121.08 Aligned_cols=140 Identities=16% Similarity=0.137 Sum_probs=112.3
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+.+++..+++...+. +..++.+|++|++++.++++++.+.++++|++ +|.. ...++.
T Consensus 26 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~vi~~ag~~-~~~~~~ 103 (264)
T PRK07576 26 AQAFARAGANVAVASRSQEKVDAAVAQLQQAGP-EGLGVSADVRDYAAVEAAFAQIADEFGPIDVLVSGAAGN-FPAPAA 103 (264)
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC-ceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCccc
Confidence 567888999999999998888777777776654 57889999999999999999999999999999 5544 235666
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS 146 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e 146 (147)
+.+.++|++.+++|+.+++.++++++|.|.+. +|+||++||..+..+.+.. +.+...|+. +++.|
T Consensus 104 ~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~g~iv~iss~~~~~~~~~~~~Y~asK~a~~~l~~--~la~e 174 (264)
T PRK07576 104 GMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-GASIIQISAPQAFVPMPMQAHVCAAKAGVDMLTR--TLALE 174 (264)
T ss_pred cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCEEEEECChhhccCCCCccHHHHHHHHHHHHHH--HHHHH
Confidence 78899999999999999999999999999765 4899999998876654433 334445555 44443
No 95
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.80 E-value=1.2e-18 Score=119.92 Aligned_cols=125 Identities=11% Similarity=0.050 Sum_probs=106.9
Q ss_pred CccccccCCcEEEE-eecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927 1 MKRSNQVHYSMGEA-TTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 1 ~~~~l~~~G~~v~l-~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~ 76 (147)
+++.|+++|++|++ ..|+.+..+++.++++..+. ++.++.+|++|++++.++++++.+.++++|++ +|.. ...+
T Consensus 20 ~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~ 97 (250)
T PRK08063 20 IALRLAEEGYDIAVNYARSRKAAEETAEEIEALGR-KALAVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASG-VLRP 97 (250)
T ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCC
Confidence 36778899999876 57888888888888877665 58899999999999999999999999999999 5654 3466
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~ 127 (147)
+.+.+.++|+..+++|+.+++.++++++|.|.+++.|+||++||..+..+.
T Consensus 98 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~ 148 (250)
T PRK08063 98 AMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYL 148 (250)
T ss_pred cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCC
Confidence 778889999999999999999999999999988878899999998766553
No 96
>PRK07069 short chain dehydrogenase; Validated
Probab=99.80 E-value=1.7e-18 Score=119.23 Aligned_cols=127 Identities=18% Similarity=0.130 Sum_probs=106.0
Q ss_pred ccccccCCcEEEEeecC-hhhHHHHHHHHHhcCC-CceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927 2 KRSNQVHYSMGEATTKD-EKRGLAAVEKLKNSGC-DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~-~~~~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~ 76 (147)
++.|+++|++|++++|+ .+.++++.+++..... .....+.+|++|++++.++++++.+.++++|++ +|.. ...+
T Consensus 16 a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~ 94 (251)
T PRK07069 16 ARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLSVLVNNAGVG-SFGA 94 (251)
T ss_pred HHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCccEEEECCCcC-CCCC
Confidence 56788899999999998 6667777777765432 235568899999999999999999999999998 6655 3356
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~ 129 (147)
+.+.+.+++++.+++|+.+++.+++.++|.|.+.+.++||++||..+..+.++
T Consensus 95 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~ 147 (251)
T PRK07069 95 IEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPD 147 (251)
T ss_pred hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCC
Confidence 77888999999999999999999999999999877789999999988765443
No 97
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.80 E-value=1.4e-18 Score=119.95 Aligned_cols=126 Identities=20% Similarity=0.196 Sum_probs=108.6
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+.++++.+++...+. ++..+.+|++|++++.+++..+.+.++++|++ +|.. ...++.
T Consensus 17 a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~ 94 (254)
T TIGR02415 17 AERLAKDGFAVAVADLNEETAKETAKEINQAGG-KAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVA-PITPIL 94 (254)
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCcc
Confidence 567889999999999998888888888876654 68899999999999999999999999999998 6654 446777
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~ 129 (147)
+.+.++|++.+++|+.+++.+++.+++.|.+.+ +++||++||..+..+.+.
T Consensus 95 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~ 146 (254)
T TIGR02415 95 EITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPI 146 (254)
T ss_pred cCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCC
Confidence 889999999999999999999999999998764 479999999888766543
No 98
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.79 E-value=6.2e-19 Score=121.93 Aligned_cols=137 Identities=20% Similarity=0.208 Sum_probs=105.9
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|+++.++.+.. .+++... ++.++.+|++|+++++++++++.+.++++|++ +|.. ...++
T Consensus 23 ~a~~l~~~G~~v~~~~~~~~~~---~~~l~~~---~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~-~~~~~ 95 (255)
T PRK06463 23 IAEAFLREGAKVAVLYNSAENE---AKELREK---GVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIM-YLMPF 95 (255)
T ss_pred HHHHHHHCCCEEEEEeCCcHHH---HHHHHhC---CCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCh
Confidence 3567889999999887754322 2233322 36789999999999999999999999999999 6765 33567
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc-------CCCchhhhccccchhhhhcc
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK-------NITNEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~-------~~~~~~~~~~~~~~~al~~e 146 (147)
.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+ |..++++...+.. ++++|
T Consensus 96 ~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~--~la~e 169 (255)
T PRK06463 96 EEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTR--RLAFE 169 (255)
T ss_pred hhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHHHHHHHHHHH--HHHHH
Confidence 7788999999999999999999999999998777799999999876532 2223455556665 55554
No 99
>PRK12743 oxidoreductase; Provisional
Probab=99.79 E-value=1.7e-18 Score=119.81 Aligned_cols=127 Identities=15% Similarity=0.120 Sum_probs=106.2
Q ss_pred ccccccCCcEEEEeec-ChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 2 KRSNQVHYSMGEATTK-DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
++.|+++|++|+++++ +.+.++++.+++...+. ++.++.+|++|+++++++++++.+.++++|++ +|.... .++
T Consensus 19 a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~-~~~ 96 (256)
T PRK12743 19 ALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGV-RAEIRQLDLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTK-APF 96 (256)
T ss_pred HHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC-CCh
Confidence 5678899999998865 56667777778777665 68999999999999999999999999999999 665533 556
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCCc
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNITN 130 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~ 130 (147)
.+.+.++|++.+++|+.+++.+++.++++|.+++ +|+||++||..+..+.++.
T Consensus 97 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~ 150 (256)
T PRK12743 97 LDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGA 150 (256)
T ss_pred hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCc
Confidence 6788999999999999999999999999997653 5899999998877665443
No 100
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.79 E-value=1.9e-18 Score=120.03 Aligned_cols=126 Identities=19% Similarity=0.198 Sum_probs=108.2
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+.++++.+.+...+. ++.++.+|+++++++.++++++.+.++++|++ ||.. ...++.
T Consensus 27 a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~-~~~~~~ 104 (263)
T PRK07814 27 ALAFAEAGADVLIAARTESQLDEVAEQIRAAGR-RAHVVAADLAHPEATAGLAGQAVEAFGRLDIVVNNVGGT-MPNPLL 104 (263)
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChh
Confidence 567888999999999998888888888766554 58889999999999999999999999999999 6654 235666
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhcc-CCCCeEEEEcCCCCCCcCCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQL-SDSPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~isS~~~~~~~~~ 129 (147)
+.+.++|+..+++|+.+++.+.+.+.|+|.+ .+.|+||++||..+..+.++
T Consensus 105 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~ 156 (263)
T PRK07814 105 STSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRG 156 (263)
T ss_pred hCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCC
Confidence 7889999999999999999999999999977 45689999999988766544
No 101
>PRK12747 short chain dehydrogenase; Provisional
Probab=99.79 E-value=1.1e-18 Score=120.55 Aligned_cols=140 Identities=14% Similarity=0.129 Sum_probs=109.6
Q ss_pred CccccccCCcEEEEee-cChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhh----cC--CccEE---ecC
Q 040927 1 MKRSNQVHYSMGEATT-KDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQ----FG--KLDIL---GGL 70 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~-r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~----~g--~id~l---ag~ 70 (147)
+++.|++.|++|+++. ++.+..+++..++...+. ++..+.+|+++.+++..+++++.+. ++ ++|++ ||.
T Consensus 20 ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~ 98 (252)
T PRK12747 20 IAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGG-SAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGI 98 (252)
T ss_pred HHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCC-ceEEEecccCCHHHHHHHHHHHHHHhhhhcCCCCCCEEEECCCc
Confidence 3577899999998875 566777777777776654 5788899999999999999888753 34 89999 776
Q ss_pred CCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhh
Q 040927 71 PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCR 144 (147)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~ 144 (147)
. ...++.+.+.++|++++++|+.++++++++++|.|.+. |+||++||.++..+.+.. +++...++. +++
T Consensus 99 ~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~--~la 173 (252)
T PRK12747 99 G-PGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN--SRIINISSAATRISLPDFIAYSMTKGAINTMTF--TLA 173 (252)
T ss_pred C-CCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC--CeEEEECCcccccCCCCchhHHHHHHHHHHHHH--HHH
Confidence 5 34567788999999999999999999999999999754 899999999987664432 345555555 454
Q ss_pred cc
Q 040927 145 RS 146 (147)
Q Consensus 145 ~e 146 (147)
+|
T Consensus 174 ~e 175 (252)
T PRK12747 174 KQ 175 (252)
T ss_pred HH
Confidence 44
No 102
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.79 E-value=2.3e-18 Score=119.46 Aligned_cols=142 Identities=20% Similarity=0.164 Sum_probs=112.1
Q ss_pred CccccccCCcEEEEeecC-hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927 1 MKRSNQVHYSMGEATTKD-EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~ 76 (147)
+++.|+++|++|+++.|+ .+..+.+.+++...+. ++.++.+|++|.+++.++++.+.+.++++|++ +|.. ...+
T Consensus 23 ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~-~~~~ 100 (261)
T PRK08936 23 MAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGG-EAIAVKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIE-NAVP 100 (261)
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCC-eEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCC
Confidence 356788999999998885 4556667777766654 68889999999999999999999999999998 6655 3356
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS 146 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e 146 (147)
+.+.+.++|++.+++|+.+++.+++.++|.|.+.. .|+||++||..+..+.+.. +.+...|.. .+++|
T Consensus 101 ~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~--~la~e 175 (261)
T PRK08936 101 SHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTE--TLAME 175 (261)
T ss_pred hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHHHHHHHHHHHH--HHHHH
Confidence 67788999999999999999999999999998764 5899999998876654432 334455555 44443
No 103
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.79 E-value=1.1e-18 Score=119.89 Aligned_cols=127 Identities=20% Similarity=0.121 Sum_probs=105.2
Q ss_pred CccccccCCcEEEEe-ecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927 1 MKRSNQVHYSMGEAT-TKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~ 76 (147)
+++.|+++|++|++. .++....++..+++...+. ++..+.+|++|.+++.++++++.+.++++|++ +|... ..+
T Consensus 19 ~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~ 96 (246)
T PRK12938 19 ICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGF-DFIASEGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITR-DVV 96 (246)
T ss_pred HHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCC
Confidence 367888999998875 4555566666777766554 57888999999999999999999999999999 66653 356
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~ 129 (147)
+.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++
T Consensus 97 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~ 149 (246)
T PRK12938 97 FRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFG 149 (246)
T ss_pred hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCC
Confidence 77889999999999999999999999999998877789999999887766443
No 104
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.79 E-value=1.5e-18 Score=120.27 Aligned_cols=123 Identities=23% Similarity=0.177 Sum_probs=104.7
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhh-cCCccEE---ecCCCcchh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQ-FGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id~l---ag~~~~~~~ 76 (147)
+++.|+++|++|++++|+.+.++++...+. + .++.++.+|++|.+++.++++.+.+. ++++|++ +|.. ...+
T Consensus 17 la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~-~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~vi~~ag~~-~~~~ 92 (260)
T PRK08267 17 TALLFAAEGWRVGAYDINEAGLAALAAELG--A-GNAWTGALDVTDRAAWDAALADFAAATGGRLDVLFNNAGIL-RGGP 92 (260)
T ss_pred HHHHHHHCCCeEEEEeCCHHHHHHHHHHhc--C-CceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCC-CCCc
Confidence 356788999999999999888777766654 3 25889999999999999999988776 6899998 6765 3356
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~ 127 (147)
+.+.+.++++.++++|+.+++.+++.+.|.|+..+.++||++||..+..+.
T Consensus 93 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~ 143 (260)
T PRK08267 93 FEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQ 143 (260)
T ss_pred cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCC
Confidence 667889999999999999999999999999998878999999998877654
No 105
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.79 E-value=1.2e-18 Score=119.98 Aligned_cols=140 Identities=14% Similarity=0.111 Sum_probs=109.1
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
++++|+++|++|++++|+. ..+..+.+...+. ++..+.+|+++++++.++++++.+.++++|++ +|... ..++
T Consensus 21 ia~~l~~~G~~vi~~~r~~--~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~-~~~~ 96 (248)
T TIGR01832 21 IAVGLAEAGADIVGAGRSE--PSETQQQVEALGR-RFLSLTADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIR-RADA 96 (248)
T ss_pred HHHHHHHCCCEEEEEcCch--HHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCh
Confidence 3678899999999999875 2344555555454 58899999999999999999999998999999 67653 3566
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCC------Cchhhhccccchhhhhcc
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNI------TNEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~------~~~~~~~~~~~~~al~~e 146 (147)
.+.+.++|++.+++|+.+++.+++.++|.|.+++ .|+||++||..+..+.+ .++++...+.. ++++|
T Consensus 97 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~--~la~e 170 (248)
T TIGR01832 97 EEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHGVAGLTK--LLANE 170 (248)
T ss_pred hhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHHHHHHHHH--HHHHH
Confidence 6788899999999999999999999999997665 68999999987665432 23345555555 45544
No 106
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.79 E-value=3e-18 Score=119.89 Aligned_cols=125 Identities=21% Similarity=0.229 Sum_probs=104.6
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+.+.++.+.+. .+.++..+.+|++|++++.++++.+.+.++++|++ +|.. ...++
T Consensus 20 la~~l~~~G~~V~~~~r~~~~~~~l~~~----~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv~~ag~~-~~~~~ 94 (277)
T PRK06180 20 LAQAALAAGHRVVGTVRSEAARADFEAL----HPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLVNNAGYG-HEGAI 94 (277)
T ss_pred HHHHHHhCcCEEEEEeCCHHHHHHHHhh----cCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcc-CCccc
Confidence 3567888999999999998766554332 22358889999999999999999999999999999 6765 34667
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN 130 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~ 130 (147)
.+.+.++|++.+++|+.+++.+++.++|+|++.+.++||++||..+..+.++.
T Consensus 95 ~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~ 147 (277)
T PRK06180 95 EESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGI 147 (277)
T ss_pred ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCc
Confidence 78889999999999999999999999999988877899999999887765443
No 107
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.79 E-value=1.1e-18 Score=121.49 Aligned_cols=134 Identities=26% Similarity=0.240 Sum_probs=108.0
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+.+..+. . .++.++.+|++|+++++++++.+.+.+|++|++ +|.. ...++
T Consensus 20 ~a~~l~~~g~~V~~~~r~~~~~~~-------~--~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag~~-~~~~~ 89 (270)
T PRK06179 20 TAEKLARAGYRVFGTSRNPARAAP-------I--PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAGVG-LAGAA 89 (270)
T ss_pred HHHHHHHCCCEEEEEeCChhhccc-------c--CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCCCC-CCcCc
Confidence 356788999999999998654321 1 247889999999999999999999999999999 6765 34667
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS 146 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e 146 (147)
.+.+.+++++.+++|+.+++.+++.++|.|++.+.++||++||..+..+.+.. +.+...+.. ++++|
T Consensus 90 ~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~--~l~~e 162 (270)
T PRK06179 90 EESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSE--SLDHE 162 (270)
T ss_pred ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHHHHHH--HHHHH
Confidence 78899999999999999999999999999998888999999999887665443 234445544 55544
No 108
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.79 E-value=2.4e-18 Score=118.54 Aligned_cols=126 Identities=19% Similarity=0.217 Sum_probs=106.7
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+.+..++..+++. .+. ++..+.||++|++++.++++.+.+.++++|++ +|.. ...++
T Consensus 21 la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~-~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~vi~~ag~~-~~~~~ 97 (252)
T PRK06138 21 TAKLFAREGARVVVADRDAEAAERVAAAIA-AGG-RAFARQGDVGSAEAVEALVDFVAARWGRLDVLVNNAGFG-CGGTV 97 (252)
T ss_pred HHHHHHHCCCeEEEecCCHHHHHHHHHHHh-cCC-eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCc
Confidence 356788899999999999887777777765 333 58899999999999999999999999999999 6654 33556
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~ 129 (147)
.+.+.+++++.+++|+.+++.+++.++|.|++++.++|+++||..+..+.++
T Consensus 98 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~ 149 (252)
T PRK06138 98 VTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRG 149 (252)
T ss_pred ccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCC
Confidence 6788999999999999999999999999998877789999999877655433
No 109
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.78 E-value=1.8e-18 Score=118.31 Aligned_cols=136 Identities=10% Similarity=-0.006 Sum_probs=105.4
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+... +++...+ +.++.+|++|+++++++++++.+.++++|++ +|.... ....
T Consensus 19 a~~l~~~G~~V~~~~r~~~~~~---~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~-~~~~ 91 (236)
T PRK06483 19 AWHLLAQGQPVIVSYRTHYPAI---DGLRQAG---AQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHNASDWLA-EKPG 91 (236)
T ss_pred HHHHHHCCCeEEEEeCCchhHH---HHHHHcC---CEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEECCccccC-CCcC
Confidence 5678899999999999875432 3333322 5778999999999999999999999999998 665422 3345
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC--CCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD--SPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e 146 (147)
+.+.++|++.+++|+.+++.+++.++|.|.+.+ .|+||++||..+..+.+. ++++...++. ++++|
T Consensus 92 ~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal~~l~~--~~a~e 165 (236)
T PRK06483 92 APLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALDNMTL--SFAAK 165 (236)
T ss_pred ccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHHHHHHH--HHHHH
Confidence 678899999999999999999999999998765 589999999887655432 3445566665 45544
No 110
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=99.78 E-value=3.5e-18 Score=118.31 Aligned_cols=143 Identities=11% Similarity=0.003 Sum_probs=107.7
Q ss_pred cccccc----CCcEEEEeecChhhHHHHHHHHHhc-CCCceEEEEecCCCHHHHHHHHHHHHhhcCCc----cEE---ec
Q 040927 2 KRSNQV----HYSMGEATTKDEKRGLAAVEKLKNS-GCDNVIFHLLDVTDPASVDSLVHFVSSQFGKL----DIL---GG 69 (147)
Q Consensus 2 ~~~l~~----~G~~v~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i----d~l---ag 69 (147)
++.|++ .|++|++++|+.+.++++.+++... ++.++.++.+|++|+++++++++.+.+.++.+ |++ ||
T Consensus 17 a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~~~~~~~~lv~nAG 96 (256)
T TIGR01500 17 AQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELPRPKGLQRLLLINNAG 96 (256)
T ss_pred HHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhccccCCCceEEEEeCCc
Confidence 445554 7999999999998888888888753 22258889999999999999999998877653 455 77
Q ss_pred CCCcch-hhhc-ccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC--CCeEEEEcCCCCCCcCCCc------hhhhccccc
Q 040927 70 LPDNWY-KMLT-QTYELAEKCIQTNYYGNKRMCEALIPLLQLSD--SPRIVNASSSMGKLKNITN------EWAKGVLSD 139 (147)
Q Consensus 70 ~~~~~~-~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~isS~~~~~~~~~~------~~~~~~~~~ 139 (147)
...... ...+ .+.++|++.+++|+.+++.+++.++|.|.++. .++||++||..+..+.+.. +.+...|+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~ 176 (256)
T TIGR01500 97 TLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGWALYCAGKAARDMLFQ 176 (256)
T ss_pred ccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCchHHHHHHHHHHHHHH
Confidence 543222 2222 35789999999999999999999999998653 4789999999887665443 345556665
Q ss_pred hhhhhcc
Q 040927 140 WMRCRRS 146 (147)
Q Consensus 140 ~~al~~e 146 (147)
+|+.|
T Consensus 177 --~la~e 181 (256)
T TIGR01500 177 --VLALE 181 (256)
T ss_pred --HHHHH
Confidence 55554
No 111
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=99.78 E-value=4e-18 Score=116.73 Aligned_cols=128 Identities=16% Similarity=0.135 Sum_probs=104.3
Q ss_pred CccccccCCcEEEEeecC-hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927 1 MKRSNQVHYSMGEATTKD-EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~ 76 (147)
+++.|+++|++|++++|+ .+..++..++++..+. ++.++.+|++|++++..+++++.+.++++|++ +|.. ...+
T Consensus 14 ~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~li~~ag~~-~~~~ 91 (239)
T TIGR01831 14 IANRLAADGFEICVHYHSGRSDAESVVSAIQAQGG-NARLLQFDVADRVACRTLLEADIAEHGAYYGVVLNAGIT-RDAA 91 (239)
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCC-eEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCc
Confidence 356788999999998865 5566777777776665 68999999999999999999999889999998 6655 2345
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHH-HhhccCCCCeEEEEcCCCCCCcCCCc
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALI-PLLQLSDSPRIVNASSSMGKLKNITN 130 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~l~~~~~~~iv~isS~~~~~~~~~~ 130 (147)
+.+.+.++|+.++++|+.+++++.+.++ |.+++.+.++||++||..+..+.+..
T Consensus 92 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~ 146 (239)
T TIGR01831 92 FPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQ 146 (239)
T ss_pred hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCC
Confidence 6678899999999999999999999875 55555566899999998887775543
No 112
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.78 E-value=3.7e-18 Score=117.50 Aligned_cols=127 Identities=20% Similarity=0.206 Sum_probs=108.2
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
++++|+++|++|++++|+.+..+++.+.+.. +. ++.++.||++|++++.++++++.+.++++|++ +|......++
T Consensus 21 l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~ 98 (251)
T PRK07231 21 IARRFAAEGARVVVTDRNEEAAERVAAEILA-GG-RAIAVAADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPL 98 (251)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CC-eEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCh
Confidence 3567888999999999999888777777655 33 58899999999999999999998899999999 6654344566
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~ 129 (147)
.+.+.++|++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.++
T Consensus 99 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~ 150 (251)
T PRK07231 99 LDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPG 150 (251)
T ss_pred hhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCC
Confidence 7788999999999999999999999999998877789999999887766544
No 113
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.78 E-value=4e-18 Score=118.12 Aligned_cols=126 Identities=20% Similarity=0.179 Sum_probs=106.1
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+.++++...+++...+. ++.++.||++|+++++++++++.+.++++|++ +|.. ...++
T Consensus 28 la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~-~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~vi~~ag~~-~~~~~ 105 (259)
T PRK08213 28 IAEALGEAGARVVLSARKAEELEEAAAHLEALGI-DALWIAADVADEADIERLAEETLERFGHVDILVNNAGAT-WGAPA 105 (259)
T ss_pred HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC-CCCCh
Confidence 3567888999999999998888888888776654 58889999999999999999999998999998 6654 23556
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHh-hccCCCCeEEEEcCCCCCCcCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPL-LQLSDSPRIVNASSSMGKLKNI 128 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-l~~~~~~~iv~isS~~~~~~~~ 128 (147)
.+.+.+.|++.+++|+.+++.+++++.|+ |.+++.+++|++||..+..+.+
T Consensus 106 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~ 157 (259)
T PRK08213 106 EDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNP 157 (259)
T ss_pred hhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCC
Confidence 67888999999999999999999999998 7766668999999987665443
No 114
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.78 E-value=4.2e-18 Score=118.28 Aligned_cols=124 Identities=18% Similarity=0.222 Sum_probs=105.8
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+.+++..+++ ..+. ++.++.+|++|++++..+++.+.+ ++++|++ +|.. ...++.
T Consensus 22 a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~-~~~~~~~D~~d~~~~~~~~~~~~~-~~~id~lv~~ag~~-~~~~~~ 97 (263)
T PRK09072 22 AEALAAAGARLLLVGRNAEKLEALAARL-PYPG-RHRWVVADLTSEAGREAVLARARE-MGGINVLINNAGVN-HFALLE 97 (263)
T ss_pred HHHHHHCCCEEEEEECCHHHHHHHHHHH-hcCC-ceEEEEccCCCHHHHHHHHHHHHh-cCCCCEEEECCCCC-Cccccc
Confidence 5678899999999999988888877777 3343 688999999999999999998876 7899999 6655 345677
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~ 129 (147)
+.+.+++++++++|+.|++.+++.++|+|.+.+.+.||++||..+..+.++
T Consensus 98 ~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~ 148 (263)
T PRK09072 98 DQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPG 148 (263)
T ss_pred cCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCC
Confidence 888999999999999999999999999998887789999999888766544
No 115
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.78 E-value=4.9e-18 Score=117.04 Aligned_cols=124 Identities=23% Similarity=0.248 Sum_probs=103.8
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+.++++.+.+ +. ++.++.+|++|.+++.++++++.+.++++|++ +|......++.
T Consensus 17 a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~ 92 (248)
T PRK10538 17 TRRFIQQGHKVIATGRRQERLQELKDEL---GD-NLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAH 92 (248)
T ss_pred HHHHHHCCCEEEEEECCHHHHHHHHHHh---cc-ceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCCCcc
Confidence 5678889999999999987776655544 32 58889999999999999999999999999998 66543334566
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~ 129 (147)
+.+.++|++.+++|+.+++.+++.++|.|.+.+.++||++||..+..+.++
T Consensus 93 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~ 143 (248)
T PRK10538 93 KASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAG 143 (248)
T ss_pred cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCC
Confidence 788899999999999999999999999998877789999999887765433
No 116
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.78 E-value=2.7e-18 Score=118.06 Aligned_cols=125 Identities=21% Similarity=0.238 Sum_probs=104.7
Q ss_pred CccccccCCcEEEEeec-ChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927 1 MKRSNQVHYSMGEATTK-DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~ 76 (147)
+++.|+++|++|+++.+ +.+..++..+++...+. ++.++.+|++|++++.++++++.+.++++|++ +|.. ....
T Consensus 22 la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~ 99 (247)
T PRK12935 22 ITVALAQEGAKVVINYNSSKEAAENLVNELGKEGH-DVYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGIT-RDRT 99 (247)
T ss_pred HHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCC
Confidence 35678889999987654 55667777777776664 68999999999999999999999999999999 6665 3355
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~ 127 (147)
+.+.+.+++++.+++|+.+++.+++.++|.|.+.+.+++|++||..+..+.
T Consensus 100 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~ 150 (247)
T PRK12935 100 FKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG 150 (247)
T ss_pred hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC
Confidence 667888999999999999999999999999987777899999998876554
No 117
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.78 E-value=5.6e-18 Score=116.58 Aligned_cols=127 Identities=19% Similarity=0.122 Sum_probs=107.6
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcC-CCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSG-CDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~ 76 (147)
+++.|+++|++|++++|+.+.++++.+++.... +.++.++.+|++|++++.++++++.+.++++|++ +|.. ...+
T Consensus 18 la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~ 96 (248)
T PRK08251 18 MAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGGLDRVIVNAGIG-KGAR 96 (248)
T ss_pred HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCCC
Confidence 356788999999999999988888877776542 2258899999999999999999999999999998 6765 3355
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~ 128 (147)
+.+.+.+.+++.+++|+.+++.+++.++|.|++.+.++||++||..+..+.+
T Consensus 97 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~ 148 (248)
T PRK08251 97 LGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLP 148 (248)
T ss_pred cCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCC
Confidence 6667788999999999999999999999999887778999999988776654
No 118
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.78 E-value=4.8e-18 Score=116.95 Aligned_cols=127 Identities=21% Similarity=0.233 Sum_probs=108.6
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+.+..+++.+++...+. ++.++.+|++|+++++++++.+.+.++++|++ +|.. ...++
T Consensus 19 la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~-~~~~~ 96 (250)
T TIGR03206 19 TCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGG-NAQAFACDITDRDSVDTAVAAAEQALGPVDVLVNNAGWD-KFGPF 96 (250)
T ss_pred HHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCh
Confidence 3567889999999999998888888787776654 58899999999999999999999999999988 6654 33566
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~ 129 (147)
.+.+.++|++.+++|+.+++.+.+.++|.|.+.+.++||++||..+..+.+.
T Consensus 97 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~ 148 (250)
T TIGR03206 97 TKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSG 148 (250)
T ss_pred hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCC
Confidence 6788899999999999999999999999998877789999999887665433
No 119
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.78 E-value=4.6e-18 Score=116.97 Aligned_cols=127 Identities=20% Similarity=0.178 Sum_probs=109.4
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+.+.+++..++++..+. ++.++.+|++|+++++++++++.+.++++|++ +|.... .++
T Consensus 23 la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~-~~~ 100 (250)
T PRK12939 23 FAEALAEAGATVAFNDGLAAEARELAAALEAAGG-RAHAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNS-KSA 100 (250)
T ss_pred HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC-CCh
Confidence 3567888999999999998888888888876654 68999999999999999999999999999999 665533 566
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~ 129 (147)
.+.+.++|++.+++|+.+++.+++.++|.|.+++.|++|++||..+..+.+.
T Consensus 101 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~ 152 (250)
T PRK12939 101 TELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPK 152 (250)
T ss_pred hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCC
Confidence 7788999999999999999999999999998877789999999887766543
No 120
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.78 E-value=1.4e-18 Score=120.69 Aligned_cols=139 Identities=18% Similarity=0.063 Sum_probs=105.3
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+.+.++++.+. .+. ++..+.+|++|.+++.++++++.+.++++|++ +|......++
T Consensus 21 ia~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~ 96 (262)
T TIGR03325 21 IVDRFVAEGARVAVLDKSAAGLQELEAA---HGD-AVVGVEGDVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTAL 96 (262)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHhh---cCC-ceEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCccCCcc
Confidence 3577889999999999988766654332 232 58889999999999999999999999999999 7754222333
Q ss_pred hccc----HHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927 78 LTQT----YELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 78 ~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e 146 (147)
.+.+ .++|++.+++|+.+++.+++.++|.|.+.+ |+||+++|..+..+.+. ++.+...+.. ++++|
T Consensus 97 ~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~l~~--~la~e 172 (262)
T TIGR03325 97 VDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVK--ELAFE 172 (262)
T ss_pred ccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CCEEEEeccceecCCCCCchhHHHHHHHHHHHH--HHHHh
Confidence 3333 257999999999999999999999997654 78999999887765432 3455566665 55554
No 121
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=99.78 E-value=4.8e-18 Score=116.93 Aligned_cols=127 Identities=19% Similarity=0.161 Sum_probs=103.9
Q ss_pred CccccccCCcEEEEee-cChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927 1 MKRSNQVHYSMGEATT-KDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~-r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~ 76 (147)
+++.|+++|++|+++. |+.+.++.+.+++...+. ++..+.||++|++++.++++++.+.++++|++ +|......+
T Consensus 18 la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~ 96 (248)
T PRK06947 18 TAVLAAARGWSVGINYARDAAAAEETADAVRAAGG-RACVVAGDVANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMP 96 (248)
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCC
Confidence 3567889999988765 666777777777766554 68899999999999999999999888999999 665533355
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC---CCeEEEEcCCCCCCcCC
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD---SPRIVNASSSMGKLKNI 128 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~isS~~~~~~~~ 128 (147)
+.+.+.++|+..+++|+.+++.+++.+++.|...+ .++||++||..+..+.+
T Consensus 97 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~ 151 (248)
T PRK06947 97 LADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSP 151 (248)
T ss_pred hhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCC
Confidence 66788999999999999999999999999986543 47899999988765543
No 122
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.77 E-value=4.7e-18 Score=118.81 Aligned_cols=123 Identities=28% Similarity=0.267 Sum_probs=104.3
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+.++++.+.+ +. ++.++.+|++|++++.++++.+.+.++++|++ +|.. ...++.
T Consensus 20 a~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~-~~~~~~ 94 (275)
T PRK08263 20 TEAALERGDRVVATARDTATLADLAEKY---GD-RLLPLALDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYG-LFGMIE 94 (275)
T ss_pred HHHHHHCCCEEEEEECCHHHHHHHHHhc---cC-CeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCc-cccccc
Confidence 5667889999999999987766654433 22 57888999999999999999999999999998 7765 446677
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~ 129 (147)
+.+.++|++.+++|+.+++.+++.++|.|++.+.++||++||..+..+.+.
T Consensus 95 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~ 145 (275)
T PRK08263 95 EVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPM 145 (275)
T ss_pred cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCC
Confidence 889999999999999999999999999998877789999999888776544
No 123
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.77 E-value=4.3e-18 Score=118.94 Aligned_cols=127 Identities=15% Similarity=0.092 Sum_probs=106.3
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcC-CCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSG-CDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~ 76 (147)
+++.|+++|++|++++|+.+..++..+++...+ ..++.++.+|++|++++.++++++.+.++++|++ +|......+
T Consensus 23 la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~ 102 (276)
T PRK05875 23 VAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGP 102 (276)
T ss_pred HHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCC
Confidence 356788999999999999887777777776542 1357889999999999999999999999999999 665433356
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~ 127 (147)
+.+.+.++|+.++++|+.+++.+++.+++.|.+.+.++|+++||..+..+.
T Consensus 103 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~ 153 (276)
T PRK05875 103 ITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTH 153 (276)
T ss_pred hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCC
Confidence 667888999999999999999999999999987777899999998876553
No 124
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.77 E-value=5.1e-18 Score=117.74 Aligned_cols=120 Identities=24% Similarity=0.218 Sum_probs=101.2
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.. ..+..+++...+. ++.++.+|++++++++++++++.+.++++|++ +|.. ...++.
T Consensus 23 a~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~ 99 (263)
T PRK08226 23 ARVFARHGANLILLDISPE-IEKLADELCGRGH-RCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVC-RLGSFL 99 (263)
T ss_pred HHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCC-ceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCcc
Confidence 5678889999999999874 4445555555444 58889999999999999999999999999999 6665 446677
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~ 124 (147)
+.+.++|++.+++|+.+++.+++.++|+|.+.+.++||++||..+.
T Consensus 100 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~ 145 (263)
T PRK08226 100 DMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGD 145 (263)
T ss_pred cCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhc
Confidence 8888999999999999999999999999987767899999997763
No 125
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.77 E-value=5.6e-18 Score=117.03 Aligned_cols=127 Identities=21% Similarity=0.263 Sum_probs=109.8
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
++++|.++|++|++++|+.+..++..+++...+. ++..+.||++|++++.++++.+.+.++++|++ +|.. ...++
T Consensus 20 la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~-~~~~~ 97 (258)
T PRK12429 20 IALALAKEGAKVVIADLNDEAAAAAAEALQKAGG-KAIGVAMDVTDEEAINAGIDYAVETFGGVDILVNNAGIQ-HVAPI 97 (258)
T ss_pred HHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCh
Confidence 3567888999999999999888888888876664 68899999999999999999999999999998 5654 33566
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~ 129 (147)
.+.+.++++..+++|+.+++.+++.++|.|++.+.++||++||..+..+.++
T Consensus 98 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~ 149 (258)
T PRK12429 98 EDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAG 149 (258)
T ss_pred hhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCC
Confidence 6788899999999999999999999999999887889999999887766544
No 126
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.77 E-value=5.2e-18 Score=116.71 Aligned_cols=126 Identities=19% Similarity=0.188 Sum_probs=102.9
Q ss_pred ccccccCCcEEEEee-cChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 2 KRSNQVHYSMGEATT-KDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~-r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++|+++|++|+++. |+.+..++..+++...+. ++.++.||++|.+++.++++++.+.++++|++ +|......++
T Consensus 19 a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~ 97 (248)
T PRK06123 19 ALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGG-EALAVAADVADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRL 97 (248)
T ss_pred HHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCC-cEEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCh
Confidence 567889999998887 455566666667766554 57889999999999999999999999999998 6665333456
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC---CCeEEEEcCCCCCCcCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD---SPRIVNASSSMGKLKNI 128 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~isS~~~~~~~~ 128 (147)
.+.+.++|+..+++|+.+++.+++.++|.|.++. +|+||++||..+..+.+
T Consensus 98 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~ 151 (248)
T PRK06123 98 EQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSP 151 (248)
T ss_pred hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCC
Confidence 6788999999999999999999999999997542 47899999988766544
No 127
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.77 E-value=4.6e-18 Score=117.06 Aligned_cols=127 Identities=24% Similarity=0.280 Sum_probs=107.1
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCC--CHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVT--DPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~ 76 (147)
++.|++.|++|++++|+.+.++++.+++...+..++.++.+|++ +++++..+++.+.+.++++|++ +|......+
T Consensus 29 a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~ 108 (247)
T PRK08945 29 ALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGP 108 (247)
T ss_pred HHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCC
Confidence 56788899999999999988888888887665445777778875 7899999999999999999999 665434456
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~ 128 (147)
+.+.+.+.|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.+
T Consensus 109 ~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~ 160 (247)
T PRK08945 109 MEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRA 160 (247)
T ss_pred cccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCC
Confidence 6678889999999999999999999999999888889999999988766543
No 128
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.77 E-value=7.3e-18 Score=120.32 Aligned_cols=121 Identities=20% Similarity=0.128 Sum_probs=101.0
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+.++++.+++...+. ++.++.+|++|.++++++++++.+.++++|++ ||......+..
T Consensus 23 a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~ 101 (322)
T PRK07453 23 AKALAKRGWHVIMACRNLKKAEAAAQELGIPPD-SYTIIHIDLGDLDSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEP 101 (322)
T ss_pred HHHHHHCCCEEEEEECCHHHHHHHHHHhhccCC-ceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCcccCCCCCCC
Confidence 567889999999999999888888887754333 58889999999999999999988777889999 77653322334
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCC--CeEEEEcCCCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDS--PRIVNASSSMG 123 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--~~iv~isS~~~ 123 (147)
+.+.++|+..+++|+.|++.+++.++|.|++++. ++||++||...
T Consensus 102 ~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~ 148 (322)
T PRK07453 102 LRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTA 148 (322)
T ss_pred CCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEccccc
Confidence 5688999999999999999999999999987753 59999999764
No 129
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.77 E-value=1e-18 Score=123.83 Aligned_cols=121 Identities=20% Similarity=0.189 Sum_probs=101.0
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhc-CCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNS-GCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~ 76 (147)
+++.|+++|++|++++|+.+..++..+++... +..++.++.+|++|.++++++++++.+.++++|++ ||.....
T Consensus 32 ~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~-- 109 (306)
T PRK06197 32 TAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYPRIDLLINNAGVMYTP-- 109 (306)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCCCCCEEEECCccccCC--
Confidence 35778899999999999988887777777643 22357889999999999999999999999999999 7754221
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~ 124 (147)
...+.++++..+++|+.+++.+++.++|.|++.+.++||++||..+.
T Consensus 110 -~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~ 156 (306)
T PRK06197 110 -KQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHR 156 (306)
T ss_pred -CccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHh
Confidence 24566789999999999999999999999988777899999997654
No 130
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.77 E-value=7.7e-18 Score=118.66 Aligned_cols=141 Identities=22% Similarity=0.199 Sum_probs=109.7
Q ss_pred CccccccCCcEEEEeecChh-hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927 1 MKRSNQVHYSMGEATTKDEK-RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~ 76 (147)
+++.|+++|++|++++|+.. ..+...+.+...+. ++.++.||++|.+++.++++++.+.++++|++ +|......+
T Consensus 62 la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~ 140 (290)
T PRK06701 62 VAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGV-KCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQS 140 (290)
T ss_pred HHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCC-eEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCC
Confidence 35678899999999999853 45555566655554 58899999999999999999999999999998 665433456
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e 146 (147)
+.+.+.++|.+.+++|+.+++.+++++++.|+. .++||++||..+..+.+. ++.+...+.. ++++|
T Consensus 141 ~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~sK~a~~~l~~--~la~~ 212 (290)
T PRK06701 141 LEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ--GSAIINTGSITGYEGNETLIDYSATKGAIHAFTR--SLAQS 212 (290)
T ss_pred cccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh--CCeEEEEecccccCCCCCcchhHHHHHHHHHHHH--HHHHH
Confidence 678899999999999999999999999999854 378999999887665433 2334455554 45543
No 131
>PRK05717 oxidoreductase; Validated
Probab=99.76 E-value=8.4e-18 Score=116.28 Aligned_cols=123 Identities=24% Similarity=0.245 Sum_probs=101.6
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc-chh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN-WYK 76 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~-~~~ 76 (147)
+++.|+++|++|++++|+....++..+++ +. ++.++.+|++|++++.++++++.+++|++|++ +|.... ..+
T Consensus 26 ~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~ 101 (255)
T PRK05717 26 IAAWLIAEGWQVVLADLDRERGSKVAKAL---GE-NAWFIAMDVADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTT 101 (255)
T ss_pred HHHHHHHcCCEEEEEcCCHHHHHHHHHHc---CC-ceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcccCCCCC
Confidence 35778899999999999876666554443 32 57889999999999999999999999999998 665432 246
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~ 128 (147)
+.+.+.++|+..+++|+.+++.+++++.|+|.+. .|+||++||..+..+.+
T Consensus 102 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~ii~~sS~~~~~~~~ 152 (255)
T PRK05717 102 LESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-NGAIVNLASTRARQSEP 152 (255)
T ss_pred hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CcEEEEEcchhhcCCCC
Confidence 6678899999999999999999999999999765 48999999998876644
No 132
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.76 E-value=1.1e-17 Score=115.97 Aligned_cols=124 Identities=15% Similarity=0.136 Sum_probs=106.6
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+..++..+++...+. ++.++.+|++|.++++++++.+.+.++++|++ +|.. ...++.
T Consensus 24 a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~-~~~~~~ 101 (262)
T PRK13394 24 ALELARAGAAVAIADLNQDGANAVADEINKAGG-KAIGVAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQ-IVNPIE 101 (262)
T ss_pred HHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCc-eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccC-CCCchh
Confidence 567889999999999999888888888877665 58889999999999999999999889999998 6654 335556
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhh-ccCCCCeEEEEcCCCCCCcC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLL-QLSDSPRIVNASSSMGKLKN 127 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l-~~~~~~~iv~isS~~~~~~~ 127 (147)
+.+.++|+..+++|+.+++.+++.+++.| ++.+.++||++||..+..+.
T Consensus 102 ~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~ 151 (262)
T PRK13394 102 NYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEAS 151 (262)
T ss_pred hCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCC
Confidence 77889999999999999999999999999 66667899999998776553
No 133
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.76 E-value=7.7e-18 Score=116.55 Aligned_cols=124 Identities=20% Similarity=0.204 Sum_probs=103.9
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+.+..+++.+++ +. ++..+.+|++|++++..+++++.+.++++|++ +|.. ...++
T Consensus 22 ia~~l~~~G~~v~~~~r~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~-~~~~~ 96 (257)
T PRK07067 22 VAERYLAEGARVVIADIKPARARLAALEI---GP-AAIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAALF-DMAPI 96 (257)
T ss_pred HHHHHHHcCCEEEEEcCCHHHHHHHHHHh---CC-ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCc
Confidence 36778899999999999988777766655 22 47889999999999999999999999999998 6655 33667
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~ 129 (147)
.+.+.++|+..+++|+.+++.+++.++|.|.+++ +++||++||..+..+.++
T Consensus 97 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~ 149 (257)
T PRK07067 97 LDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEAL 149 (257)
T ss_pred ccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCC
Confidence 7888999999999999999999999999987653 479999999877666443
No 134
>PRK06940 short chain dehydrogenase; Provisional
Probab=99.76 E-value=7.6e-18 Score=117.84 Aligned_cols=112 Identities=20% Similarity=0.195 Sum_probs=93.6
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+ +|++|++++|+.+.++++.+++...+. ++.++.||++|++++.++++++ ++++++|++ ||...
T Consensus 18 a~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~i~~~~~~~-~~~g~id~li~nAG~~~------ 88 (275)
T PRK06940 18 ARRVG-AGKKVLLADYNEENLEAAAKTLREAGF-DVSTQEVDVSSRESVKALAATA-QTLGPVTGLVHTAGVSP------ 88 (275)
T ss_pred HHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEeecCCHHHHHHHHHHH-HhcCCCCEEEECCCcCC------
Confidence 45675 799999999998888888888876554 6889999999999999999988 567999999 67541
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK 126 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~ 126 (147)
+.++|++++++|+.+++++++.++|.|.+. |++|++||.++..+
T Consensus 89 --~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--g~iv~isS~~~~~~ 132 (275)
T PRK06940 89 --SQASPEAILKVDLYGTALVLEEFGKVIAPG--GAGVVIASQSGHRL 132 (275)
T ss_pred --chhhHHHHHHHhhHHHHHHHHHHHHHHhhC--CCEEEEEecccccC
Confidence 236789999999999999999999999654 77899999887654
No 135
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.76 E-value=9.7e-18 Score=129.55 Aligned_cols=142 Identities=19% Similarity=0.185 Sum_probs=114.6
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+.+.++++.+++...+. ++.++.+|++|+++++++++++.+.+|++|++ +|.... ..+
T Consensus 387 la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~-~~~ 464 (657)
T PRK07201 387 TAIKVAEAGATVFLVARNGEALDELVAEIRAKGG-TAHAYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIR-RSV 464 (657)
T ss_pred HHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC-CCh
Confidence 3567889999999999999988888888877665 68899999999999999999999999999999 665422 222
Q ss_pred hc--ccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927 78 LT--QTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 78 ~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e 146 (147)
.. .+.+++++.+++|+.+++.+++.++|.|++++.|+||++||.++..+.+. ++++...|.. +++.|
T Consensus 465 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e 539 (657)
T PRK07201 465 ENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASKAALDAFSD--VAASE 539 (657)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHHHHHHHHHHHH--HHHHH
Confidence 22 23578999999999999999999999999888899999999887765443 2345556665 55554
No 136
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.76 E-value=1.2e-17 Score=115.54 Aligned_cols=125 Identities=19% Similarity=0.142 Sum_probs=106.4
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.++++++.+++...+. ++.++.+|+++++++.++++++.+.++++|++ +|.. ...++.
T Consensus 26 a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~-~~~~~~ 103 (258)
T PRK06949 26 AQVLAQAGAKVVLASRRVERLKELRAEIEAEGG-AAHVVSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVS-TTQKLV 103 (258)
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC-CCCCcc
Confidence 567888999999999999888888888766554 58899999999999999999999999999999 6654 335666
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC--------CCeEEEEcCCCCCCcCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD--------SPRIVNASSSMGKLKNI 128 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--------~~~iv~isS~~~~~~~~ 128 (147)
+.+.++|+.++++|+.+++.+.+.++|.|.++. .++||++||..+..+.+
T Consensus 104 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~ 161 (258)
T PRK06949 104 DVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLP 161 (258)
T ss_pred cCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCC
Confidence 778899999999999999999999999987653 47999999988776543
No 137
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=99.76 E-value=1.8e-18 Score=114.66 Aligned_cols=128 Identities=22% Similarity=0.191 Sum_probs=103.8
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHh-cCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKN-SGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+.+|.++|..+.+...+.++.+. ..+|++ .+..++.++.||+++..++++.++++...+|.+|++ ||+..
T Consensus 22 sk~Ll~kgik~~~i~~~~En~~a-~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~iDIlINgAGi~~----- 95 (261)
T KOG4169|consen 22 SKALLEKGIKVLVIDDSEENPEA-IAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGTIDILINGAGILD----- 95 (261)
T ss_pred HHHHHHcCchheeehhhhhCHHH-HHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCceEEEEccccccc-----
Confidence 46788899998888777777554 444444 344468999999999999999999999999999999 77762
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC---CCeEEEEcCCCCCCcCCCc------hhhhccccc
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD---SPRIVNASSSMGKLKNITN------EWAKGVLSD 139 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~isS~~~~~~~~~~------~~~~~~~~~ 139 (147)
..+|++++++|+.|.+..+...+|+|.+.. +|-|||+||..|.-|.|.. ++.+..|+-
T Consensus 96 ----dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~AsKaGVvgFTR 162 (261)
T KOG4169|consen 96 ----DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASKAGVVGFTR 162 (261)
T ss_pred ----chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhcccceeeeeh
Confidence 467999999999999999999999998764 5789999999999885543 445555655
No 138
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.76 E-value=1.9e-17 Score=113.35 Aligned_cols=126 Identities=21% Similarity=0.167 Sum_probs=105.4
Q ss_pred ccccccCCcEEEEeec-ChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 2 KRSNQVHYSMGEATTK-DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
++.|+++|++|+++.| +....++..+++...+. ++.++.+|++|+++++++++.+.+.++++|++ +|... ..++
T Consensus 17 a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~ 94 (242)
T TIGR01829 17 CQRLAKDGYRVAANCGPNEERAEAWLQEQGALGF-DFRVVEGDVSSFESCKAAVAKVEAELGPIDVLVNNAGITR-DATF 94 (242)
T ss_pred HHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCC-ceEEEEecCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCC-CCCh
Confidence 5678899999999988 66666666666655554 58899999999999999999999999999999 66552 3456
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~ 129 (147)
.+.+.++|++.+++|+.+++.+++.++|.|++.+.++||++||..+..+.++
T Consensus 95 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~ 146 (242)
T TIGR01829 95 KKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFG 146 (242)
T ss_pred hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCC
Confidence 6788999999999999999999999999998877789999999887766543
No 139
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.76 E-value=1.9e-17 Score=115.87 Aligned_cols=126 Identities=22% Similarity=0.275 Sum_probs=105.5
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcC-CCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSG-CDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
++.|+++|++|++++|+.+..+++.+++...+ ..++.++.+|++|+++++. ++++.+.++++|++ +|.. ....+
T Consensus 20 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~id~vv~~ag~~-~~~~~ 97 (280)
T PRK06914 20 TLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGRIDLLVNNAGYA-NGGFV 97 (280)
T ss_pred HHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCCeeEEEECCccc-ccCcc
Confidence 56788899999999999888877777665543 2358899999999999999 89998888999998 6655 33556
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~ 129 (147)
.+.+.+++++.+++|+.+++.+++.++|.|++.+.++||++||..+..+.++
T Consensus 98 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~ 149 (280)
T PRK06914 98 EEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPG 149 (280)
T ss_pred ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCC
Confidence 6788899999999999999999999999998877789999999887766443
No 140
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.75 E-value=1.4e-17 Score=114.37 Aligned_cols=123 Identities=22% Similarity=0.180 Sum_probs=102.3
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+..++..+++...+..++.++.||++|+++++++++++.+ .+|++ +|.... .++.
T Consensus 18 a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~d~vv~~ag~~~~-~~~~ 93 (243)
T PRK07102 18 ARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---LPDIVLIAVGTLGD-QAAC 93 (243)
T ss_pred HHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---cCCEEEECCcCCCC-cccc
Confidence 5678899999999999998888777777655444689999999999999999888764 45888 665423 4566
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~ 128 (147)
+.+.+++.+.+++|+.+++++++.++|.|.+.+.+++|++||..+..+.+
T Consensus 94 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~ 143 (243)
T PRK07102 94 EADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRA 143 (243)
T ss_pred cCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCC
Confidence 78889999999999999999999999999988789999999988766543
No 141
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.75 E-value=1.8e-17 Score=115.87 Aligned_cols=126 Identities=20% Similarity=0.237 Sum_probs=106.1
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+.+.+++..+++...+. ++.++.+|++|++++.++++++.+.++++|++ +|.. ...+.
T Consensus 26 la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~-~~~~~ 103 (274)
T PRK07775 26 TAIELAAAGFPVALGARRVEKCEELVDKIRADGG-EAVAFPLDVTDPDSVKSFVAQAEEALGEIEVLVSGAGDT-YFGKL 103 (274)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcC-CCccc
Confidence 3577889999999999988777777777766564 58889999999999999999998888999998 6654 23555
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~ 128 (147)
.+.+.+++++.+++|+.+++++++.++|.|.+++.++||++||..+..+.+
T Consensus 104 ~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~ 154 (274)
T PRK07775 104 HEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRP 154 (274)
T ss_pred ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC
Confidence 677889999999999999999999999999877778999999987765543
No 142
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.75 E-value=2.1e-17 Score=113.54 Aligned_cols=127 Identities=17% Similarity=0.144 Sum_probs=105.1
Q ss_pred ccccccCCcEEEEe-ecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 2 KRSNQVHYSMGEAT-TKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 2 ~~~l~~~G~~v~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
++.|+++|++|+++ .|+.+..++...++...+. ++..+.+|++|+++++++++++.+.++++|++ +|......++
T Consensus 18 ~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~ 96 (247)
T PRK09730 18 ALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGG-KAFVLQADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTV 96 (247)
T ss_pred HHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCC-eEEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcc
Confidence 56788899998774 6777777777777776654 58889999999999999999999889999999 6654344566
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC---CCeEEEEcCCCCCCcCCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD---SPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~isS~~~~~~~~~ 129 (147)
.+.+.++|+..+++|+.+++.+++.+++.|.+.. +|++|++||..+..+.+.
T Consensus 97 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~ 151 (247)
T PRK09730 97 ENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPG 151 (247)
T ss_pred ccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCC
Confidence 7788999999999999999999999999987652 478999999887766543
No 143
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.75 E-value=8.2e-18 Score=116.43 Aligned_cols=122 Identities=20% Similarity=0.181 Sum_probs=101.4
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+.+.. +..+++...+. ++.++.+|+++++++.++++++.+.++++|++ +|... ...+
T Consensus 23 la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~ 99 (258)
T PRK08628 23 ISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQP-RAEFVQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVND-GVGL 99 (258)
T ss_pred HHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCcccC-CCcc
Confidence 3678899999999999988766 66677766665 58999999999999999999999999999999 66542 2334
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~ 127 (147)
...+ ++|+..+++|+.+++.+.+.++|.|.+. .++||++||..+..+.
T Consensus 100 ~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~ 147 (258)
T PRK08628 100 EAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALTGQ 147 (258)
T ss_pred cCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhccCC
Confidence 4444 9999999999999999999999998765 4899999998877654
No 144
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.75 E-value=2.2e-17 Score=113.28 Aligned_cols=126 Identities=20% Similarity=0.092 Sum_probs=102.0
Q ss_pred ccccccCCcEEEEeecChh-hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 2 KRSNQVHYSMGEATTKDEK-RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
++.|+++|++|++++|+.. ...+....+...+. ++.++.+|++|++++.++++.+.++++++|++ +|.. ...++
T Consensus 19 a~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~-~~~~~ 96 (245)
T PRK12824 19 ARELLNDGYRVIATYFSGNDCAKDWFEEYGFTED-QVRLKELDVTDTEECAEALAEIEEEEGPVDILVNNAGIT-RDSVF 96 (245)
T ss_pred HHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCC-eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCcc
Confidence 5678889999999999853 23333333333333 58899999999999999999999999999999 6655 33556
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~ 129 (147)
.+.+.++|++++++|+.+++.+++.++|.|++.+.++||++||..+..+.++
T Consensus 97 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~ 148 (245)
T PRK12824 97 KRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFG 148 (245)
T ss_pred ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCC
Confidence 6788999999999999999999999999998877789999999887765443
No 145
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.75 E-value=1.9e-17 Score=114.38 Aligned_cols=123 Identities=24% Similarity=0.212 Sum_probs=101.0
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+... .+...++. + .++..+.+|+++++++.++++++.+.++++|++ +|.. ...++.
T Consensus 32 a~~l~~~G~~Vi~~~r~~~~-~~~~~~~~--~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~-~~~~~~ 106 (255)
T PRK06841 32 AELFAAKGARVALLDRSEDV-AEVAAQLL--G-GNAKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVA-LLAPAE 106 (255)
T ss_pred HHHHHHCCCEEEEEeCCHHH-HHHHHHhh--C-CceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC-CCCChh
Confidence 56788999999999998753 33333332 2 246789999999999999999999999999999 6655 345667
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~ 129 (147)
+.+.++|++.+++|+.+++++++.++|.|.+.+.++||++||..+..+.+.
T Consensus 107 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~ 157 (255)
T PRK06841 107 DVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALER 157 (255)
T ss_pred hCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCC
Confidence 788999999999999999999999999998877799999999887666543
No 146
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.75 E-value=1.3e-17 Score=115.49 Aligned_cols=117 Identities=19% Similarity=0.112 Sum_probs=97.2
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC-cchhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD-NWYKM 77 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~-~~~~~ 77 (147)
++.|+++|++|++++|+.... .+ .++.++.+|++|+++++++++++.+.++++|++ +|... ...++
T Consensus 26 a~~l~~~G~~v~~~~r~~~~~---------~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~ 95 (260)
T PRK06523 26 VARLLEAGARVVTTARSRPDD---------LP-EGVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGF 95 (260)
T ss_pred HHHHHHCCCEEEEEeCChhhh---------cC-CceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccCCCCc
Confidence 567788899999999985421 12 257889999999999999999999999999998 66432 23556
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~ 128 (147)
.+.+.++|++.+++|+.+++.+++.++|+|.+++.|+||++||..+..+.+
T Consensus 96 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~ 146 (260)
T PRK06523 96 AALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLP 146 (260)
T ss_pred ccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCC
Confidence 678899999999999999999999999999888778999999998876643
No 147
>PRK05884 short chain dehydrogenase; Provisional
Probab=99.75 E-value=1.7e-17 Score=112.88 Aligned_cols=131 Identities=12% Similarity=0.017 Sum_probs=99.3
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC-----c
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD-----N 73 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~-----~ 73 (147)
++.|+++|++|++++|+.++++++.+++ ++.++.+|++|+++++++++++.+ ++|++ +|... .
T Consensus 17 a~~l~~~g~~v~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~~~---~id~lv~~ag~~~~~~~~~ 87 (223)
T PRK05884 17 AEGFRNDGHKVTLVGARRDDLEVAAKEL------DVDAIVCDNTDPASLEEARGLFPH---HLDTIVNVPAPSWDAGDPR 87 (223)
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHHHHhc------cCcEEecCCCCHHHHHHHHHHHhh---cCcEEEECCCccccCCCCc
Confidence 5678889999999999988777665554 256788999999999999887653 68888 55321 1
Q ss_pred chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC--CcCCCchhhhccccchhhhhcc
Q 040927 74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK--LKNITNEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~--~~~~~~~~~~~~~~~~~al~~e 146 (147)
..++.+ +.++|++.+++|+.+++++++.++|.|.+ +|+||++||.+.. ..|..++++...|+. ++++|
T Consensus 88 ~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~~~~Y~asKaal~~~~~--~la~e 157 (223)
T PRK05884 88 TYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPENPPAGSAEAAIKAALSNWTA--GQAAV 157 (223)
T ss_pred ccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCCCCCccccHHHHHHHHHHHH--HHHHH
Confidence 112333 46899999999999999999999999964 4899999997631 234455677778877 66665
No 148
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.74 E-value=1.1e-17 Score=115.70 Aligned_cols=143 Identities=21% Similarity=0.213 Sum_probs=121.8
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCC-CceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGC-DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+..+..+|++|.++.|+..+++++.++++.... .++.++.+|++|-+++...++++....+++|.+ ||.. ..+.+
T Consensus 50 a~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~d~l~~cAG~~-v~g~f 128 (331)
T KOG1210|consen 50 ALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPIDNLFCCAGVA-VPGLF 128 (331)
T ss_pred HHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCcceEEEecCcc-ccccc
Confidence 566778999999999999999999999876543 237789999999999999999999999999998 8876 45888
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCC------chhhhccccchhhhhccC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRSI 147 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e~ 147 (147)
.+.+.++++..+++|+.+.++++++.+|.|++.. .|+|+.+||..+..|..+ .+.+..++.. ++|+|+
T Consensus 129 ~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~alrgLa~--~l~qE~ 203 (331)
T KOG1210|consen 129 EDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFALRGLAE--ALRQEL 203 (331)
T ss_pred ccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHHHHHHH--HHHHHH
Confidence 8999999999999999999999999999999876 579999999988776544 3456666666 788774
No 149
>PRK06196 oxidoreductase; Provisional
Probab=99.74 E-value=7.5e-18 Score=119.95 Aligned_cols=116 Identities=21% Similarity=0.175 Sum_probs=97.7
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+.+.+++..+++. ++.++.+|++|.++++++++++.+.++++|++ ||.... +
T Consensus 42 ~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~-----~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~--~- 113 (315)
T PRK06196 42 TTRALAQAGAHVIVPARRPDVAREALAGID-----GVEVVMLDLADLESVRAFAERFLDSGRRIDILINNAGVMAC--P- 113 (315)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-----hCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEEECCCCCCC--C-
Confidence 357788999999999999887777766663 37789999999999999999999988999999 775422 1
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~ 124 (147)
...+.++|+..+++|+.+++.+++.++|.|.+++.++||++||..+.
T Consensus 114 ~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~ 160 (315)
T PRK06196 114 ETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHR 160 (315)
T ss_pred CccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhc
Confidence 24566789999999999999999999999988777899999997653
No 150
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.74 E-value=3.6e-17 Score=113.28 Aligned_cols=124 Identities=21% Similarity=0.261 Sum_probs=105.0
Q ss_pred ccccccCCcE-EEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 2 KRSNQVHYSM-GEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 2 ~~~l~~~G~~-v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
++.|+++|++ |++++|+.+..++..+++...+. ++.++.+|+++++++.++++.+.+.++++|++ +|.. ...++
T Consensus 23 a~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~-~~~~~ 100 (260)
T PRK06198 23 ARAFAERGAAGLVICGRNAEKGEAQAAELEALGA-KAVFVQADLSDVEDCRRVVAAADEAFGRLDALVNAAGLT-DRGTI 100 (260)
T ss_pred HHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCC-eEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcC-CCCCh
Confidence 5678889999 99999998887777777766654 58889999999999999999999999999999 6655 33556
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKN 127 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~ 127 (147)
.+.+.++|+.++++|+.+++.+++.++|.|.+.+ .|++|++||..+..+.
T Consensus 101 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~ 151 (260)
T PRK06198 101 LDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ 151 (260)
T ss_pred hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCC
Confidence 6788999999999999999999999999997653 4899999998876543
No 151
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.74 E-value=3e-17 Score=114.67 Aligned_cols=134 Identities=25% Similarity=0.215 Sum_probs=105.8
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+.++++ ... .+.++.+|++|++++.++++.+.+.++++|++ +|.. ...++.
T Consensus 18 a~~l~~~G~~V~~~~r~~~~~~~~----~~~---~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~ 89 (274)
T PRK05693 18 ADAFKAAGYEVWATARKAEDVEAL----AAA---GFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAGYG-AMGPLL 89 (274)
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHH----HHC---CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC-CCCCcc
Confidence 567888999999999987665443 222 36788999999999999999999999999999 6655 345667
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS 146 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e 146 (147)
+.+.++|+..+++|+.+++.+++.++|.|.+. .|+||++||..+..+.+.. +.+...++. +++.|
T Consensus 90 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~--~l~~e 160 (274)
T PRK05693 90 DGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSD--ALRLE 160 (274)
T ss_pred cCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEECCccccCCCCCccHHHHHHHHHHHHHH--HHHHH
Confidence 78999999999999999999999999999764 4899999998887665433 334455555 55554
No 152
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.74 E-value=3.7e-17 Score=114.26 Aligned_cols=123 Identities=23% Similarity=0.236 Sum_probs=102.5
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|+++.|+.+.++++.+.. +. ++.++.+|++|.+++.++++++.+.++++|++ +|.. ...+.
T Consensus 18 la~~L~~~g~~v~~~~r~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~ 92 (276)
T PRK06482 18 MTERLLARGDRVAATVRRPDALDDLKARY---GD-RLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVSNAGYG-LFGAA 92 (276)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cC-ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCccc
Confidence 35678899999999999987666554433 22 58889999999999999999998888999999 6765 33566
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~ 128 (147)
.+.+.+++++.+++|+.+++.++++++|+|++.+.++||++||..+..+.+
T Consensus 93 ~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~ 143 (276)
T PRK06482 93 EELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYP 143 (276)
T ss_pred ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCC
Confidence 677889999999999999999999999999887778999999988765544
No 153
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.74 E-value=5.2e-17 Score=112.50 Aligned_cols=125 Identities=17% Similarity=0.100 Sum_probs=102.9
Q ss_pred ccccccCCcEEEEeec-ChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 2 KRSNQVHYSMGEATTK-DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
++.|+++|++|+++.+ +.+.++++.+++...+. ++.++.||++|.+++.++++++.+.++++|++ +|.. ...++
T Consensus 26 a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~~~~~~~~~~~~~~~iD~vi~~ag~~-~~~~~ 103 (258)
T PRK09134 26 ALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGR-RAVALQADLADEAEVRALVARASAALGPITLLVNNASLF-EYDSA 103 (258)
T ss_pred HHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCC-CCCcc
Confidence 5678899999988766 45566667777765554 58899999999999999999999989999999 6655 23556
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~ 128 (147)
.+.+.++|++.+++|+.+++.+++.+.+.|.+...+.||+++|..+..+.+
T Consensus 104 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p 154 (258)
T PRK09134 104 ASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNP 154 (258)
T ss_pred ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCC
Confidence 678899999999999999999999999999877778999999876654433
No 154
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.74 E-value=3.3e-17 Score=113.11 Aligned_cols=128 Identities=21% Similarity=0.223 Sum_probs=102.8
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+. ...+. ++.++.+|++++++++++++.+.+.++++|++ +|.. ...++.
T Consensus 23 a~~l~~~g~~v~~~~r~~~~--------~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~ 92 (252)
T PRK07856 23 ARAFLAAGATVVVCGRRAPE--------TVDGR-PAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNAGGS-PYALAA 92 (252)
T ss_pred HHHHHHCCCEEEEEeCChhh--------hhcCC-ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCcc
Confidence 56788899999999998654 11232 57889999999999999999999999999999 7755 335666
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccC-CCCeEEEEcCCCCCCcCCCc------hhhhccccc
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLS-DSPRIVNASSSMGKLKNITN------EWAKGVLSD 139 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~~~~~------~~~~~~~~~ 139 (147)
+.+.++|++.+++|+.+++.+++.+.|.|.+. +.|+||++||..+..+.+.. +.+...+..
T Consensus 93 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~ 160 (252)
T PRK07856 93 EASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTR 160 (252)
T ss_pred cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHHHHHHHHHH
Confidence 78899999999999999999999999999864 45899999999887665432 344455554
No 155
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.73 E-value=4e-17 Score=112.75 Aligned_cols=126 Identities=19% Similarity=0.208 Sum_probs=102.8
Q ss_pred CccccccCCcEEEEeecCh-hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC-cch
Q 040927 1 MKRSNQVHYSMGEATTKDE-KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD-NWY 75 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~-~~~ 75 (147)
+++.|+++|++|++++|+. +..++..+.++..+. ++.++.+|++|++++.++++.+.+.++++|++ +|... ...
T Consensus 18 la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~ 96 (256)
T PRK12745 18 IARALAAAGFDLAINDRPDDEELAATQQELRALGV-EVIFFPADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRG 96 (256)
T ss_pred HHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCC
Confidence 3577889999999999864 455566666665554 68899999999999999999999999999999 66532 234
Q ss_pred hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC------CCeEEEEcCCCCCCcC
Q 040927 76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD------SPRIVNASSSMGKLKN 127 (147)
Q Consensus 76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~~~iv~isS~~~~~~~ 127 (147)
++.+.+.++|++.+++|+.+++.+++.+++.|.++. .++||++||..+..+.
T Consensus 97 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~ 154 (256)
T PRK12745 97 DLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVS 154 (256)
T ss_pred ChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCC
Confidence 567788899999999999999999999999998654 3569999998876554
No 156
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.73 E-value=4.6e-17 Score=112.69 Aligned_cols=140 Identities=15% Similarity=0.122 Sum_probs=106.5
Q ss_pred CccccccCCcEEEEeecC----hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc
Q 040927 1 MKRSNQVHYSMGEATTKD----EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN 73 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~----~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~ 73 (147)
+++.|+++|++|+++.++ .+..+++.+++...+. ++.++.+|++|++++.++++++.+.++++|++ +|...
T Consensus 24 ~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~- 101 (257)
T PRK12744 24 IARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGA-KAVAFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVL- 101 (257)
T ss_pred HHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCC-cEEEEecCcCCHHHHHHHHHHHHHhhCCCCEEEECCcccC-
Confidence 357788899996666543 3455666666665554 58889999999999999999999999999999 67652
Q ss_pred chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEE-cCCCCCC-----cCCCchhhhccccchhhhhcc
Q 040927 74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNA-SSSMGKL-----KNITNEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~i-sS~~~~~-----~~~~~~~~~~~~~~~~al~~e 146 (147)
..++.+.+.++|++.+++|+.+++.+++.++|.|.+. ++++++ ||..+.. .+..++.+.+.|+. ++++|
T Consensus 102 ~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--~~iv~~~ss~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e 176 (257)
T PRK12744 102 KKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDN--GKIVTLVTSLLGAFTPFYSAYAGSKAPVEHFTR--AASKE 176 (257)
T ss_pred CCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC--CCEEEEecchhcccCCCcccchhhHHHHHHHHH--HHHHH
Confidence 3566778899999999999999999999999999754 667776 4543322 23445667777777 66665
No 157
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.73 E-value=2.2e-17 Score=114.83 Aligned_cols=133 Identities=18% Similarity=0.117 Sum_probs=101.4
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc----
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW---- 74 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~---- 74 (147)
++.|+++|++|++++++....+ . .++.++.+|++|+++++++++.+.+.++++|++ +|.....
T Consensus 26 a~~l~~~G~~v~~~~~~~~~~~---------~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~ 95 (266)
T PRK06171 26 VKELLANGANVVNADIHGGDGQ---------H-ENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVD 95 (266)
T ss_pred HHHHHHCCCEEEEEeCCccccc---------c-CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCccccc
Confidence 4567778888888877654321 1 147788999999999999999999999999999 6653221
Q ss_pred ----hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhh
Q 040927 75 ----YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCR 144 (147)
Q Consensus 75 ----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~ 144 (147)
.++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..+.+.. +.+...+.. +++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~--~la 173 (266)
T PRK06171 96 EKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTR--SWA 173 (266)
T ss_pred cccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCCchhHHHHHHHHHHHH--HHH
Confidence 12346789999999999999999999999999988777899999999887654332 344455555 454
Q ss_pred cc
Q 040927 145 RS 146 (147)
Q Consensus 145 ~e 146 (147)
+|
T Consensus 174 ~e 175 (266)
T PRK06171 174 KE 175 (266)
T ss_pred HH
Confidence 44
No 158
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.73 E-value=8.6e-17 Score=111.61 Aligned_cols=125 Identities=23% Similarity=0.316 Sum_probs=105.8
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+..+.+++.+++...+. ++.++.+|++|++++..+++.+.++++++|++ +|.. ...++.
T Consensus 18 a~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~ 95 (263)
T PRK06181 18 AVRLARAGAQLVLAARNETRLASLAQELADHGG-EALVVPTDVSDAEACERLIEAAVARFGGIDILVNNAGIT-MWSRFD 95 (263)
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcc-cccchh
Confidence 456788999999999998888888888876664 68899999999999999999999999999999 6654 335566
Q ss_pred cc-cHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927 79 TQ-TYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 79 ~~-~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~ 129 (147)
+. +.+++++.+++|+.+++.+++.+.|.|.+. .++||++||..+..+.++
T Consensus 96 ~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~ 146 (263)
T PRK06181 96 ELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGLTGVPT 146 (263)
T ss_pred ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccccCCCCC
Confidence 66 889999999999999999999999998765 489999999887766544
No 159
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.73 E-value=8.8e-17 Score=110.35 Aligned_cols=125 Identities=22% Similarity=0.197 Sum_probs=103.4
Q ss_pred CccccccCCcEEEEeecCh-hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927 1 MKRSNQVHYSMGEATTKDE-KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~ 76 (147)
+++.|+++|++|+++.|+. ...+++.+++...+. ++.++.+|++|++++.++++++.+.++++|++ +|.. ...+
T Consensus 21 la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~ 98 (245)
T PRK12937 21 IARRLAADGFAVAVNYAGSAAAADELVAEIEAAGG-RAIAVQADVADAAAVTRLFDAAETAFGRIDVLVNNAGVM-PLGT 98 (245)
T ss_pred HHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCC
Confidence 3577889999998887754 445666677766554 68999999999999999999999999999999 6665 3356
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~ 129 (147)
+.+.+.++|++++++|+.+++.+++.++|.|.. .++||++||..+..+.++
T Consensus 99 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~ 149 (245)
T PRK12937 99 IADFDLEDFDRTIATNLRGAFVVLREAARHLGQ--GGRIINLSTSVIALPLPG 149 (245)
T ss_pred hhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc--CcEEEEEeeccccCCCCC
Confidence 677889999999999999999999999999865 379999999887766544
No 160
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.73 E-value=4.9e-18 Score=119.86 Aligned_cols=95 Identities=12% Similarity=0.045 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHhhcCCccEE---ecCCC-cchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927 48 ASVDSLVHFVSSQFGKLDIL---GGLPD-NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123 (147)
Q Consensus 48 ~~~~~~~~~~~~~~g~id~l---ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~ 123 (147)
++++++++++.+++|++|++ ||... ...++.+++.++|++.+++|+.|+++++++++|+|+++ |+||+++|..+
T Consensus 104 ~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~~--G~ii~iss~~~ 181 (299)
T PRK06300 104 YTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPG--GSTISLTYLAS 181 (299)
T ss_pred HHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC--CeEEEEeehhh
Confidence 35899999999999999998 66542 24678899999999999999999999999999999753 78999999888
Q ss_pred CCcCCCc-------hhhhccccchhhhhcc
Q 040927 124 KLKNITN-------EWAKGVLSDWMRCRRS 146 (147)
Q Consensus 124 ~~~~~~~-------~~~~~~~~~~~al~~e 146 (147)
..+.+.. +++...|+. +|+.|
T Consensus 182 ~~~~p~~~~~Y~asKaAl~~lt~--~la~e 209 (299)
T PRK06300 182 MRAVPGYGGGMSSAKAALESDTK--VLAWE 209 (299)
T ss_pred cCcCCCccHHHHHHHHHHHHHHH--HHHHH
Confidence 7665442 245556666 56555
No 161
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.73 E-value=6.3e-17 Score=111.32 Aligned_cols=121 Identities=22% Similarity=0.243 Sum_probs=100.2
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+.+++..+++ +. ++.++.+|++|.+++..+++.+.+.++++|++ +|.. ...++.
T Consensus 23 a~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~ 97 (249)
T PRK06500 23 ARQFLAEGARVAITGRDPASLEAARAEL---GE-SALVIRADAGDVAAQKALAQALAEAFGRLDAVFINAGVA-KFAPLE 97 (249)
T ss_pred HHHHHHCCCEEEEecCCHHHHHHHHHHh---CC-ceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC-CCCChh
Confidence 5678899999999999977666655554 33 57889999999999999999999999999998 6654 335667
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~ 129 (147)
+.+.++|++.+++|+.+++.++++++|.|.. .+++|+++|..+..+.+.
T Consensus 98 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~i~~~S~~~~~~~~~ 146 (249)
T PRK06500 98 DWDEAMFDRSFNTNVKGPYFLIQALLPLLAN--PASIVLNGSINAHIGMPN 146 (249)
T ss_pred hCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEechHhccCCCC
Confidence 7899999999999999999999999999864 378999999877665443
No 162
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.73 E-value=4e-17 Score=112.53 Aligned_cols=132 Identities=18% Similarity=0.136 Sum_probs=103.9
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+. +...+. ++..+.+|++|++++.++++++.+.++++|++ +|.. ...++.
T Consensus 25 a~~l~~~G~~v~~~~~~~---------~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~ 93 (252)
T PRK08220 25 ALAFVEAGAKVIGFDQAF---------LTQEDY-PFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGIL-RMGATD 93 (252)
T ss_pred HHHHHHCCCEEEEEecch---------hhhcCC-ceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcC-CCCCcc
Confidence 566788899999998875 122233 58889999999999999999999999999999 6654 335677
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e 146 (147)
+.+.++|+..+++|+.+++.+++.++|.|++.+.|+||++||..+..+.++ ++.+...++. .+++|
T Consensus 94 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e 165 (252)
T PRK08220 94 SLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAK--CVGLE 165 (252)
T ss_pred cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHHHHHHHHHH--HHHHH
Confidence 788999999999999999999999999998877789999999877655332 3344555554 44443
No 163
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=99.72 E-value=4.3e-17 Score=113.50 Aligned_cols=143 Identities=11% Similarity=0.058 Sum_probs=102.5
Q ss_pred CccccccCCcEEEEeec-ChhhHHHHHHHHHhcCCCceEEEEecCCCHHHH----HHHHHHHHhhcCCccEE---ecCCC
Q 040927 1 MKRSNQVHYSMGEATTK-DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASV----DSLVHFVSSQFGKLDIL---GGLPD 72 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~----~~~~~~~~~~~g~id~l---ag~~~ 72 (147)
+++.|+++|++|++++| +.+.++++.+++....+.+..++.+|++|++++ +++++.+.+.+|++|++ ||...
T Consensus 17 ~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~g~iD~lv~nAG~~~ 96 (267)
T TIGR02685 17 IAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRAFGRCDVLVNNASAFY 96 (267)
T ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHccCCceEEEECCccCC
Confidence 36788899999999875 456777777777543323577899999999865 55666666778999998 77542
Q ss_pred cchhhhcccH-----------HHHHHhHHHhhhhHHHHHHHHHHhhccC------CCCeEEEEcCCCCCCcCCC------
Q 040927 73 NWYKMLTQTY-----------ELAEKCIQTNYYGNKRMCEALIPLLQLS------DSPRIVNASSSMGKLKNIT------ 129 (147)
Q Consensus 73 ~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~iv~isS~~~~~~~~~------ 129 (147)
+ .++.+.+. ++|.+.+++|+.+++.+++.++|.|... ..++|++++|..+..+.++
T Consensus 97 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~~~~~~~~~~~Y~a 175 (267)
T TIGR02685 97 P-TPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTM 175 (267)
T ss_pred C-CcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhhccCCCcccchhHH
Confidence 2 33333332 3589999999999999999999998643 2468999999887665433
Q ss_pred chhhhccccchhhhhcc
Q 040927 130 NEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 130 ~~~~~~~~~~~~al~~e 146 (147)
++++...+.. +|++|
T Consensus 176 sK~a~~~~~~--~la~e 190 (267)
T TIGR02685 176 AKHALEGLTR--SAALE 190 (267)
T ss_pred HHHHHHHHHH--HHHHH
Confidence 3445566666 56655
No 164
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.72 E-value=1.2e-16 Score=109.96 Aligned_cols=124 Identities=23% Similarity=0.213 Sum_probs=106.6
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+...+..+++...+. ++.++.+|++|++++.++++++.+.++++|++ +|... ..++.
T Consensus 23 ~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~ 100 (251)
T PRK12826 23 AVRLAADGAEVIVVDICGDDAAATAELVEAAGG-KARARQVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFP-LTPFA 100 (251)
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChh
Confidence 567888999999999998887877777776654 58899999999999999999999999999998 56553 35666
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC-CcC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK-LKN 127 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~-~~~ 127 (147)
+.+.++++..+++|+.+++.+.+.++|.|.+++.+++|++||..+. .+.
T Consensus 101 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~ 150 (251)
T PRK12826 101 EMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGY 150 (251)
T ss_pred hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCC
Confidence 7889999999999999999999999999988777899999998876 443
No 165
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.72 E-value=9.3e-17 Score=110.17 Aligned_cols=123 Identities=18% Similarity=0.153 Sum_probs=102.4
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|+.|++.+|+.+.+++....+ +. ++.++.+|++|.++++++++++.+.++++|++ +|... ..++.
T Consensus 23 a~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~ 97 (245)
T PRK12936 23 ARLLHAQGAIVGLHGTRVEKLEALAAEL---GE-RVKIFPANLSDRDEVKALGQKAEADLEGVDILVNNAGITK-DGLFV 97 (245)
T ss_pred HHHHHHCCCEEEEEcCCHHHHHHHHHHh---CC-ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCccc
Confidence 5678889999999999887777665544 32 57889999999999999999999999999999 66553 35566
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~ 129 (147)
+.+.++|++.+++|+.+++.+++.+.+.+.+++.++||++||..+..+.+.
T Consensus 98 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~ 148 (245)
T PRK12936 98 RMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPG 148 (245)
T ss_pred cCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCC
Confidence 778899999999999999999999999887766789999999887766543
No 166
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.72 E-value=1e-16 Score=110.91 Aligned_cols=120 Identities=20% Similarity=0.264 Sum_probs=99.6
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc-chhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN-WYKM 77 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~-~~~~ 77 (147)
++.|+++|++|++++|+...+++..+++. ..++.+|++|+++++++++++.+.++++|++ +|...+ ..++
T Consensus 24 a~~l~~~G~~v~~~~r~~~~~~~~~~~~~------~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~ 97 (255)
T PRK06057 24 ARRLAAEGATVVVGDIDPEAGKAAADEVG------GLFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSI 97 (255)
T ss_pred HHHHHHcCCEEEEEeCCHHHHHHHHHHcC------CcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCc
Confidence 56788999999999999877666555541 2578899999999999999999888999998 665422 2456
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~ 127 (147)
.+.+.+.|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.
T Consensus 98 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~ 147 (255)
T PRK06057 98 LNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGS 147 (255)
T ss_pred ccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCC
Confidence 67888999999999999999999999999988777899999998766554
No 167
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.72 E-value=1.2e-16 Score=110.55 Aligned_cols=119 Identities=18% Similarity=0.077 Sum_probs=101.6
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+..+++.+++. + .++..+.+|++|++++.++++++.++++++|++ +|.... .++.
T Consensus 19 a~~L~~~g~~v~~~~r~~~~~~~~~~~~~--~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~-~~~~ 94 (257)
T PRK07074 19 ARRFLAAGDRVLALDIDAAALAAFADALG--D-ARFVPVACDLTDAASLAAALANAAAERGPVDVLVANAGAARA-ASLH 94 (257)
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHHHHHhc--C-CceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC-CChh
Confidence 56788899999999999888777777662 2 258899999999999999999999999999998 665533 5666
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~ 124 (147)
+.+.++|...+++|+.+++.+.+.+++.+.+++.++||++||..+.
T Consensus 95 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~ 140 (257)
T PRK07074 95 DTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGM 140 (257)
T ss_pred hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhc
Confidence 7888999999999999999999999999988777899999997654
No 168
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.72 E-value=1.7e-16 Score=109.46 Aligned_cols=126 Identities=20% Similarity=0.221 Sum_probs=106.2
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+.+..+++.+++...+. ++..+.+|++|++++..+++.+.+.++++|++ +|.. ...+.
T Consensus 17 l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~-~~~~~ 94 (255)
T TIGR01963 17 IALALAAAGANVVVNDLGEAGAEAAAKVATDAGG-SVIYLVADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQ-HVAPI 94 (255)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCC-CCCCc
Confidence 3567889999999999998888888777766554 68899999999999999999999888899998 5554 23445
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~ 128 (147)
.+.+.+++++.+++|+.+++.+++.++|.|.+.+.+++|++||..+..+.+
T Consensus 95 ~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~ 145 (255)
T TIGR01963 95 EEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASP 145 (255)
T ss_pred ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCC
Confidence 567788999999999999999999999999887778999999987766544
No 169
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.72 E-value=1.4e-16 Score=109.36 Aligned_cols=126 Identities=25% Similarity=0.279 Sum_probs=107.1
Q ss_pred ccccccCCcEEEEe-ecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 2 KRSNQVHYSMGEAT-TKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 2 ~~~l~~~G~~v~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
++.|+++|++|+++ .|+.+..++..+.+...+. ++.++.+|++|++++.++++.+.+.++++|++ +|.. ...++
T Consensus 22 a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~ 99 (247)
T PRK05565 22 AELLAKEGAKVVIAYDINEEAAQELLEEIKEEGG-DAIAVKADVSSEEDVENLVEQIVEKFGKIDILVNNAGIS-NFGLV 99 (247)
T ss_pred HHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCcC-CCCCh
Confidence 56788899999998 9988887777777766544 58899999999999999999999988999999 6655 44566
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~ 129 (147)
.+.+.++|++.+++|+.+++.+.+.++|.+.+.+.+++|++||..+..+.+.
T Consensus 100 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~ 151 (247)
T PRK05565 100 TDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASC 151 (247)
T ss_pred hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCC
Confidence 7788999999999999999999999999998887789999999877665443
No 170
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.71 E-value=1.7e-16 Score=108.50 Aligned_cols=123 Identities=28% Similarity=0.241 Sum_probs=103.4
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+.++++.+++... . ++.++.+|++|++++.++++++.+.++++|++ +|.. ...++.
T Consensus 23 a~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~-~~~~~~ 99 (237)
T PRK07326 23 AEALLAEGYKVAITARDQKELEEAAAELNNK-G-NVLGLAADVRDEADVQRAVDAIVAAFGGLDVLIANAGVG-HFAPVE 99 (237)
T ss_pred HHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc-C-cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCchh
Confidence 5667888999999999988888887777654 2 58899999999999999999999999999999 5544 335666
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~ 128 (147)
+.+.+++++.+++|+.+++.+++.+++.|. .+.++||++||..+..+..
T Consensus 100 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~iv~~ss~~~~~~~~ 148 (237)
T PRK07326 100 ELTPEEWRLVIDTNLTGAFYTIKAAVPALK-RGGGYIINISSLAGTNFFA 148 (237)
T ss_pred hCCHHHHHHHHhhccHHHHHHHHHHHHHHH-HCCeEEEEECChhhccCCC
Confidence 788999999999999999999999999983 3458999999988765543
No 171
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.71 E-value=1.8e-16 Score=108.57 Aligned_cols=125 Identities=25% Similarity=0.260 Sum_probs=106.6
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+..+....++...+. ++.++.+|++|++++.++++++.+.++++|++ +|.. ...++.
T Consensus 22 ~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~~~ 99 (246)
T PRK05653 22 ALRLAADGAKVVIYDSNEEAAEALAAELRAAGG-EARVLVFDVSDEAAVRALIEAAVEAFGALDILVNNAGIT-RDALLP 99 (246)
T ss_pred HHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcC-CCCChh
Confidence 567888999999999998888888888876665 58899999999999999999998888999998 5554 235566
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~ 128 (147)
+.+.++++..++.|+.+++.+++.++|.|.+.+.++||++||..+..+.+
T Consensus 100 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~ 149 (246)
T PRK05653 100 RMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNP 149 (246)
T ss_pred hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCC
Confidence 77889999999999999999999999999887778999999987765543
No 172
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.71 E-value=1.5e-16 Score=109.81 Aligned_cols=124 Identities=16% Similarity=0.230 Sum_probs=100.9
Q ss_pred CccccccCCcEEEEe-ecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhc------CCccEE---ecC
Q 040927 1 MKRSNQVHYSMGEAT-TKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQF------GKLDIL---GGL 70 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~------g~id~l---ag~ 70 (147)
+++.|+++|++|++. .|+.+..++..+++...+. ++.++.+|++|++++.++++++.+.+ +++|++ +|.
T Consensus 22 la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 22 IAMRLANDGALVAIHYGRNKQAADETIREIESNGG-KAFLIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGI 100 (254)
T ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCcCCHHHHHHHHHHHHHHhccccCCCCccEEEECCCC
Confidence 367788999998775 6887777777777765443 58889999999999999999998876 478998 665
Q ss_pred CCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927 71 PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128 (147)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~ 128 (147)
. ...++.+.+.+.|+..+++|+.+++.+++.++|.|.+. +++|++||..+..+.+
T Consensus 101 ~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~v~~sS~~~~~~~~ 155 (254)
T PRK12746 101 G-TQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAE--GRVINISSAEVRLGFT 155 (254)
T ss_pred C-CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC--CEEEEECCHHhcCCCC
Confidence 4 33566678899999999999999999999999998654 7899999987765533
No 173
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.70 E-value=2.1e-16 Score=122.29 Aligned_cols=127 Identities=14% Similarity=0.105 Sum_probs=107.0
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhc-CCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNS-GCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
++.|+++|++|++++|+.+.++++.+++... +..++..+.+|++|++++.++++++.+.+|++|++ ||.. ...++
T Consensus 431 A~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~~-~~~~~ 509 (676)
T TIGR02632 431 ARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIA-TSSPF 509 (676)
T ss_pred HHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCC-CCCCc
Confidence 5678899999999999988888777777643 32257789999999999999999999999999998 7765 33566
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~~ 129 (147)
.+.+.++|+..+++|+.+++.+++.++|.|++.+ +++||++||..+..+.+.
T Consensus 510 ~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~ 562 (676)
T TIGR02632 510 EETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKN 562 (676)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCC
Confidence 7788999999999999999999999999998764 578999999888766544
No 174
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=99.70 E-value=3.9e-16 Score=106.64 Aligned_cols=127 Identities=24% Similarity=0.277 Sum_probs=104.8
Q ss_pred CccccccCCcEEEEeecCh-hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927 1 MKRSNQVHYSMGEATTKDE-KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~ 76 (147)
+++.|.++|++|++++|+. +.++...+.+...+. ++.++.+|++|+++++++++.+.+.++++|++ +|.. ...+
T Consensus 14 la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~-~~~~ 91 (239)
T TIGR01830 14 IALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGV-KALGVVCDVSDREDVKAVVEEIEEELGPIDILVNNAGIT-RDNL 91 (239)
T ss_pred HHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCC-ceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCC-CCCC
Confidence 3567888999999998875 555566666766665 58899999999999999999999999999999 6654 2245
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~ 129 (147)
+.+.+.+++++.+++|+.+++.+++.+.+.+.+.+.++++++||.++..+.++
T Consensus 92 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~ 144 (239)
T TIGR01830 92 LMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAG 144 (239)
T ss_pred hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCC
Confidence 56778899999999999999999999999997766789999999887766543
No 175
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.70 E-value=2.7e-16 Score=108.29 Aligned_cols=120 Identities=19% Similarity=0.110 Sum_probs=99.0
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc----
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW---- 74 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~---- 74 (147)
++.|+++|++|++++|+.+++++..+++...+. ++..+.+|+++++++.++++.+.+.++++|++ +|.....
T Consensus 22 a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~ 100 (253)
T PRK08217 22 AEYLAQKGAKLALIDLNQEKLEEAVAECGALGT-EVRGYAANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVK 100 (253)
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCcCcccc
Confidence 466788999999999998888888888776654 68889999999999999999998888999998 6643210
Q ss_pred ---hhh-hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccC-CCCeEEEEcCCC
Q 040927 75 ---YKM-LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLS-DSPRIVNASSSM 122 (147)
Q Consensus 75 ---~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~ 122 (147)
.++ .+.+.++|+.++++|+.+++.+.+.++|.|.+. .++.|+++||..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~ 153 (253)
T PRK08217 101 AKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA 153 (253)
T ss_pred cccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc
Confidence 112 567889999999999999999999999999765 457899999864
No 176
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=99.69 E-value=3.1e-16 Score=103.96 Aligned_cols=121 Identities=22% Similarity=0.272 Sum_probs=93.6
Q ss_pred ccCCcEEEEe-ecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhc--CCccEE---ecCCCcchhhhc
Q 040927 6 QVHYSMGEAT-TKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQF--GKLDIL---GGLPDNWYKMLT 79 (147)
Q Consensus 6 ~~~G~~v~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~id~l---ag~~~~~~~~~~ 79 (147)
...|-.+++. .|+.++..+..+.. .....+++.+..|+++.++++++++++.+-. ..+|++ +|+........+
T Consensus 25 k~~~i~~iiat~r~~e~a~~~l~~k-~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~ 103 (249)
T KOG1611|consen 25 KDKGIEVIIATARDPEKAATELALK-SKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLK 103 (249)
T ss_pred cCCCcEEEEEecCChHHhhHHHHHh-hccCCceEEEEEecccHHHHHHHHHHHHhhcccCCceEEEeccceeeecccccC
Confidence 3457776555 56677652222222 2223479999999999999999999998873 477887 887766677778
Q ss_pred ccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-----------CCeEEEEcCCCCCCcC
Q 040927 80 QTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-----------SPRIVNASSSMGKLKN 127 (147)
Q Consensus 80 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-----------~~~iv~isS~~~~~~~ 127 (147)
.+.+.|.+.+++|..||+.++|.|+|++++.. ++.|||+||.++..+.
T Consensus 104 ~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~ 162 (249)
T KOG1611|consen 104 PSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGG 162 (249)
T ss_pred CcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCC
Confidence 88999999999999999999999999998754 2489999998887653
No 177
>PRK08324 short chain dehydrogenase; Validated
Probab=99.68 E-value=5.7e-16 Score=120.18 Aligned_cols=125 Identities=18% Similarity=0.114 Sum_probs=107.7
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|.++|++|++++|+.+.++...+++... . ++..+.+|++|++++.++++++.+.+|++|++ +|.. ...++.
T Consensus 439 a~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~-~-~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~-~~~~~~ 515 (681)
T PRK08324 439 AKRLAAEGACVVLADLDEEAAEAAAAELGGP-D-RALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIA-ISGPIE 515 (681)
T ss_pred HHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc-C-cEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCChh
Confidence 5678889999999999998888777777654 2 58899999999999999999999999999998 7765 336677
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCC-CeEEEEcCCCCCCcCCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDS-PRIVNASSSMGKLKNIT 129 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~iv~isS~~~~~~~~~ 129 (147)
+.+.++|+..+++|+.+++.+++.++|.|++++. |+||++||..+..+.++
T Consensus 516 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~ 567 (681)
T PRK08324 516 ETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPN 567 (681)
T ss_pred hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCC
Confidence 8899999999999999999999999999988664 89999999888766544
No 178
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.68 E-value=3.7e-16 Score=107.71 Aligned_cols=126 Identities=15% Similarity=0.103 Sum_probs=97.2
Q ss_pred CccccccCCcEEEEeecCh-hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCC--cc--EE---ecCCC
Q 040927 1 MKRSNQVHYSMGEATTKDE-KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGK--LD--IL---GGLPD 72 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~--id--~l---ag~~~ 72 (147)
+++.|+++|++|++++|+. +.+++..+ ..+. ++.++.+|++|+++++++++++.+.++. ++ ++ +|...
T Consensus 17 ia~~l~~~g~~V~~~~r~~~~~~~~~~~---~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~ 92 (251)
T PRK06924 17 IANQLLEKGTHVISISRTENKELTKLAE---QYNS-NLTFHSLDLQDVHELETNFNEILSSIQEDNVSSIHLINNAGMVA 92 (251)
T ss_pred HHHHHHhcCCEEEEEeCCchHHHHHHHh---ccCC-ceEEEEecCCCHHHHHHHHHHHHHhcCcccCCceEEEEcceecc
Confidence 3678889999999999986 33333222 2233 5888999999999999999998876653 22 33 66654
Q ss_pred cchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccC-CCCeEEEEcCCCCCCcCCCc
Q 040927 73 NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLS-DSPRIVNASSSMGKLKNITN 130 (147)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~~~~~ 130 (147)
+..++.+.+.++|.+.+++|+.+++.+++.++|.|.+. ..++||++||..+..+.++.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~ 151 (251)
T PRK06924 93 PIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGW 151 (251)
T ss_pred cCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCc
Confidence 55677788999999999999999999999999999875 35789999998877665443
No 179
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.68 E-value=1e-15 Score=105.23 Aligned_cols=127 Identities=20% Similarity=0.200 Sum_probs=102.8
Q ss_pred CccccccCCcEEEEeec----ChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc
Q 040927 1 MKRSNQVHYSMGEATTK----DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN 73 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r----~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~ 73 (147)
+++.|+++|++|++++| +.+..+++.+++...+. ++.++.+|++|+++++++++++.+.++++|++ +|...
T Consensus 22 la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~- 99 (249)
T PRK12827 22 IAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGG-KALGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIAT- 99 (249)
T ss_pred HHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC-
Confidence 35678899999988665 44555666666665554 68899999999999999999999888999998 66653
Q ss_pred chhhhcccHHHHHHhHHHhhhhHHHHHHHHH-HhhccCCCCeEEEEcCCCCCCcCCC
Q 040927 74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALI-PLLQLSDSPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~l~~~~~~~iv~isS~~~~~~~~~ 129 (147)
..++.+.+.++|+..+++|+.+++.+++.+. |.|.+...+++|++||..+..+.++
T Consensus 100 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~ 156 (249)
T PRK12827 100 DAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRG 156 (249)
T ss_pred CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCC
Confidence 3566778899999999999999999999999 6676666688999999887765443
No 180
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.67 E-value=6.6e-16 Score=114.83 Aligned_cols=122 Identities=20% Similarity=0.177 Sum_probs=97.8
Q ss_pred ccccccCCcEEEEeecCh--hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927 2 KRSNQVHYSMGEATTKDE--KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~ 76 (147)
++.|+++|++|+++++.. +.++++.+++ ....+.+|++|+++++++++.+.+.++++|++ +|... ...
T Consensus 227 a~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~------~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~vi~~AG~~~-~~~ 299 (450)
T PRK08261 227 AEVLARDGAHVVCLDVPAAGEALAAVANRV------GGTALALDITAPDAPARIAEHLAERHGGLDIVVHNAGITR-DKT 299 (450)
T ss_pred HHHHHHCCCEEEEEeCCccHHHHHHHHHHc------CCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCC-CCC
Confidence 567888999999998843 3333333332 24578899999999999999999999999999 77653 356
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN 130 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~ 130 (147)
+.+.+.++|+..+++|+.+++++++.+++.+..+++++||++||.++..+.+..
T Consensus 300 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~ 353 (450)
T PRK08261 300 LANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQ 353 (450)
T ss_pred hhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCC
Confidence 778899999999999999999999999997655566899999998887665443
No 181
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.67 E-value=8.8e-16 Score=105.86 Aligned_cols=139 Identities=19% Similarity=0.118 Sum_probs=104.9
Q ss_pred ccccccCCcEEEEeec-ChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCC-ccEE---ecCCC----
Q 040927 2 KRSNQVHYSMGEATTK-DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGK-LDIL---GGLPD---- 72 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~-id~l---ag~~~---- 72 (147)
++.|+++|++|+++.+ +.+..+++..++ +. ++.++.+|++|++++.++++++.+.++. +|++ +|...
T Consensus 22 a~~l~~~G~~vv~~~~~~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~ 97 (253)
T PRK08642 22 ARAFAREGARVVVNYHQSEDAAEALADEL---GD-RAIALQADVTDREQVQAMFATATEHFGKPITTVVNNALADFSFDG 97 (253)
T ss_pred HHHHHHCCCeEEEEcCCCHHHHHHHHHHh---CC-ceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCccccccc
Confidence 5678899999988765 455555444443 22 5888999999999999999999988887 9998 65421
Q ss_pred -cchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC------CCchhhhccccchhhhhc
Q 040927 73 -NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN------ITNEWAKGVLSDWMRCRR 145 (147)
Q Consensus 73 -~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~------~~~~~~~~~~~~~~al~~ 145 (147)
...++.+.+.++|++.+++|+.+++.+++.++|.|.+.+.|+||++||..+..+. ..++.+.+.+.. ++++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~l~~--~la~ 175 (253)
T PRK08642 98 DARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYTTAKAALLGLTR--NLAA 175 (253)
T ss_pred cCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCccchHHHHHHHHHHHH--HHHH
Confidence 1245677889999999999999999999999999987777999999997665433 223445555555 4544
Q ss_pred c
Q 040927 146 S 146 (147)
Q Consensus 146 e 146 (147)
|
T Consensus 176 ~ 176 (253)
T PRK08642 176 E 176 (253)
T ss_pred H
Confidence 4
No 182
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.67 E-value=8.9e-16 Score=104.83 Aligned_cols=123 Identities=18% Similarity=0.169 Sum_probs=102.5
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+...+..+++... ....+.+|++|.+++.++++.+.+.++++|++ +|.. ...++.
T Consensus 24 a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~-~~~~~~ 99 (239)
T PRK12828 24 AAWLAARGARVALIGRGAAPLSQTLPGVPAD---ALRIGGIDLVDPQAARRAVDEVNRQFGRLDALVNIAGAF-VWGTIA 99 (239)
T ss_pred HHHHHHCCCeEEEEeCChHhHHHHHHHHhhc---CceEEEeecCCHHHHHHHHHHHHHHhCCcCEEEECCccc-CcCChh
Confidence 5678889999999999987776666666543 35677899999999999999999999999998 5654 234556
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~ 128 (147)
..+.+++++.+++|+.+++.++++++|.+.+++.++||++||..+..+.+
T Consensus 100 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~ 149 (239)
T PRK12828 100 DGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGP 149 (239)
T ss_pred hCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCC
Confidence 77889999999999999999999999999887778999999988765543
No 183
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.67 E-value=4.4e-16 Score=106.86 Aligned_cols=132 Identities=14% Similarity=0.066 Sum_probs=97.4
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
++++|+++|++|++++|+.+.++++.+ .+. ++.++.||++|+++++++++++.. .+|.+ +|... ..+.
T Consensus 17 la~~L~~~G~~V~~~~r~~~~~~~~~~----~~~-~~~~~~~D~~~~~~~~~~~~~~~~---~~d~~i~~ag~~~-~~~~ 87 (240)
T PRK06101 17 LALDYAKQGWQVIACGRNQSVLDELHT----QSA-NIFTLAFDVTDHPGTKAALSQLPF---IPELWIFNAGDCE-YMDD 87 (240)
T ss_pred HHHHHHhCCCEEEEEECCHHHHHHHHH----hcC-CCeEEEeeCCCHHHHHHHHHhccc---CCCEEEEcCcccc-cCCC
Confidence 367888999999999999876555433 232 578899999999999999887643 35655 66432 2333
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhc
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRR 145 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~ 145 (147)
.+.+.++|++++++|+.+++++++.++|.|.+ +++||++||..+..+.+.. +++.+.|+. +++.
T Consensus 88 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~--~l~~ 157 (240)
T PRK06101 88 GKVDATLMARVFNVNVLGVANCIEGIQPHLSC--GHRVVIVGSIASELALPRAEAYGASKAAVAYFAR--TLQL 157 (240)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCeEEEEechhhccCCCCCchhhHHHHHHHHHHH--HHHH
Confidence 45788999999999999999999999999854 3689999998877664432 344555555 4443
No 184
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=99.67 E-value=1.4e-15 Score=104.87 Aligned_cols=138 Identities=24% Similarity=0.235 Sum_probs=105.5
Q ss_pred ccccccCCcEEEEeecChhh--HHHHHHHHHhcCC-CceEEEEecCCC-HHHHHHHHHHHHhhcCCccEE---ecCCCcc
Q 040927 2 KRSNQVHYSMGEATTKDEKR--GLAAVEKLKNSGC-DNVIFHLLDVTD-PASVDSLVHFVSSQFGKLDIL---GGLPDNW 74 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~--~~~~~~~l~~~~~-~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id~l---ag~~~~~ 74 (147)
++.|+++|++|+++.++.+. .+.+.+... ... ..+....+|+++ .++++.+++.+.+.+|++|++ ||.....
T Consensus 22 a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~ 100 (251)
T COG1028 22 ARALAREGARVVVAARRSEEEAAEALAAAIK-EAGGGRAAAVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPD 100 (251)
T ss_pred HHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-hcCCCcEEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC
Confidence 56788999998888887653 344444433 221 247788899998 999999999999999999977 7766321
Q ss_pred hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC-------chhhhccccchhhhhcc
Q 040927 75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT-------NEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~-------~~~~~~~~~~~~al~~e 146 (147)
.++.+.+.++|++.+++|+.+++.+++.+.|.+.++ +||++||..+. +.++ +++++..|++ +++.|
T Consensus 101 ~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~~~~~~~~Y~~sK~al~~~~~--~l~~e 173 (251)
T COG1028 101 APLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-GGPPGQAAYAASKAALIGLTK--ALALE 173 (251)
T ss_pred CChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-CCCCCcchHHHHHHHHHHHHH--HHHHH
Confidence 477788899999999999999999999888888833 99999999886 5433 3456667776 55544
No 185
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.67 E-value=3.4e-17 Score=104.72 Aligned_cols=134 Identities=16% Similarity=-0.009 Sum_probs=103.3
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
+.+|++.|++|+.+.|+++.+..+.++. +. -+..+..|+++++.+.+.+ ...+++|++ ||.. ...++.
T Consensus 24 v~~La~aGA~ViAvaR~~a~L~sLV~e~---p~-~I~Pi~~Dls~wea~~~~l----~~v~pidgLVNNAgvA-~~~pf~ 94 (245)
T KOG1207|consen 24 VLSLAKAGAQVIAVARNEANLLSLVKET---PS-LIIPIVGDLSAWEALFKLL----VPVFPIDGLVNNAGVA-TNHPFG 94 (245)
T ss_pred HHHHHhcCCEEEEEecCHHHHHHHHhhC---Cc-ceeeeEecccHHHHHHHhh----cccCchhhhhccchhh-hcchHH
Confidence 5678999999999999998888776664 22 3677888999866554443 344789999 7766 458888
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccC-CCCeEEEEcCCCCCCcC------CCchhhhccccchhhhhcc
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLS-DSPRIVNASSSMGKLKN------ITNEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~isS~~~~~~~------~~~~~~~~~~~~~~al~~e 146 (147)
+++.++++++|++|+.+++...|.....+..+ .+|.|||+||.++..+. ...+++....++ +|+-|
T Consensus 95 eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatKaALDmlTk--~lAlE 167 (245)
T KOG1207|consen 95 EITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATKAALDMLTK--CLALE 167 (245)
T ss_pred HHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecHHHHHHHHH--HHHHh
Confidence 99999999999999999999999966655433 46889999999988774 344567777777 44444
No 186
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.67 E-value=1.9e-15 Score=104.08 Aligned_cols=125 Identities=21% Similarity=0.190 Sum_probs=101.8
Q ss_pred ccccccCCcEEEEeecC-hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 2 KRSNQVHYSMGEATTKD-EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++|+++|++|++..|+ ..........+...+. ++..+.+|+++++++.++++++.+.++++|++ +|.. ...++
T Consensus 23 ~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~-~~~~~ 100 (252)
T PRK06077 23 AVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGG-EGIGVLADVSTREGCETLAKATIDRYGVADILVNNAGLG-LFSPF 100 (252)
T ss_pred HHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCC-eeEEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCCh
Confidence 56788999998887754 4455555566666554 57889999999999999999999999999999 6764 33566
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN 130 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~ 130 (147)
.+.+.++|++.+++|+.+++.+++.++|.|.+. ++||++||..+..+.++.
T Consensus 101 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~iv~~sS~~~~~~~~~~ 151 (252)
T PRK06077 101 LNVDDKLIDKHISTDFKSVIYCSQELAKEMREG--GAIVNIASVAGIRPAYGL 151 (252)
T ss_pred hhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC--cEEEEEcchhccCCCCCc
Confidence 678888999999999999999999999998753 799999999887765544
No 187
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.66 E-value=5.8e-16 Score=106.35 Aligned_cols=124 Identities=13% Similarity=0.061 Sum_probs=97.2
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHH-HHhhc---CCccEE---ecCCCc
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHF-VSSQF---GKLDIL---GGLPDN 73 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~-~~~~~---g~id~l---ag~~~~ 73 (147)
+++.|+++|++|++++|+.... . ....+ .++.++.+|++|++++.+++.+ +.+.+ +++|++ +|...+
T Consensus 17 ia~~l~~~G~~v~~~~r~~~~~--~---~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~ 90 (243)
T PRK07023 17 LAEQLLQPGIAVLGVARSRHPS--L---AAAAG-ERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLLINNAGTVEP 90 (243)
T ss_pred HHHHHHhCCCEEEEEecCcchh--h---hhccC-CeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceEEEEcCcccCC
Confidence 3567889999999999986431 1 12223 3688899999999999998876 55544 468877 666544
Q ss_pred chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc
Q 040927 74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN 130 (147)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~ 130 (147)
..++.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~ 147 (243)
T PRK07023 91 IGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGW 147 (243)
T ss_pred CCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCc
Confidence 456667889999999999999999999999999988777899999999877665443
No 188
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.66 E-value=1.6e-15 Score=105.12 Aligned_cols=125 Identities=25% Similarity=0.262 Sum_probs=102.3
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+..+++.+++... ++.++.+|++|++++.++++++.+.++++|++ +|......++.
T Consensus 28 a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~ 104 (264)
T PRK12829 28 AEAFAEAGARVHVCDVSEAALAATAARLPGA---KVTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGID 104 (264)
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC---ceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcc
Confidence 5678889999999999987766665555322 46889999999999999999999999999999 66543445566
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCC-CeEEEEcCCCCCCcCCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDS-PRIVNASSSMGKLKNIT 129 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~iv~isS~~~~~~~~~ 129 (147)
..+.++|++.+++|+.+++.+++.+++.+...+. +.|+++||..+..+.+.
T Consensus 105 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~ 156 (264)
T PRK12829 105 EITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPG 156 (264)
T ss_pred cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCC
Confidence 7788999999999999999999999999887665 78999999887666544
No 189
>PRK07041 short chain dehydrogenase; Provisional
Probab=99.66 E-value=1.3e-15 Score=103.70 Aligned_cols=133 Identities=17% Similarity=0.148 Sum_probs=100.8
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+.+.+++..++++. +. ++.++.+|++|++++.+++++ ++++|++ +|.. ...++
T Consensus 13 ~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~~~~~~~~----~~~id~li~~ag~~-~~~~~ 85 (230)
T PRK07041 13 LARAFAAEGARVTIASRSRDRLAAAARALGG-GA-PVRTAALDITDEAAVDAFFAE----AGPFDHVVITAADT-PGGPV 85 (230)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CC-ceEEEEccCCCHHHHHHHHHh----cCCCCEEEECCCCC-CCCCh
Confidence 3567889999999999998877777666653 33 588899999999999888765 4789998 6654 23566
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN------EWAKGVLSDWMRCRRS 146 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~------~~~~~~~~~~~al~~e 146 (147)
.+.+.++|++++++|+.+++.+++ .+.+. +.|+||++||..+..+.++. +++...+.. +++.|
T Consensus 86 ~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~--~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e 154 (230)
T PRK07041 86 RALPLAAAQAAMDSKFWGAYRVAR--AARIA--PGGSLTFVSGFAAVRPSASGVLQGAINAALEALAR--GLALE 154 (230)
T ss_pred hhCCHHHHHHHHHHHHHHHHHHHh--hhhhc--CCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHH--HHHHH
Confidence 678899999999999999999999 44554 35899999999887665443 334455554 44443
No 190
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.65 E-value=3e-15 Score=102.68 Aligned_cols=125 Identities=23% Similarity=0.246 Sum_probs=102.1
Q ss_pred ccccccCCcEEEEeecChh-hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 2 KRSNQVHYSMGEATTKDEK-RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
++.|.++|++|+++.|+.. ..+...+++...+. ++..+.+|+++++++.++++++.+.++++|++ +|.... .+.
T Consensus 22 ~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~-~~~ 99 (248)
T PRK05557 22 AERLAAQGANVVINYASSEAGAEALVAEIGALGG-KALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRD-NLL 99 (248)
T ss_pred HHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC-CCc
Confidence 5667889999988887654 45566666655554 68899999999999999999999988999998 665433 555
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~ 128 (147)
.+.+.+.+++.+++|+.+++.+.+.++|.+.+.+.+++|++||..+..+.+
T Consensus 100 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~ 150 (248)
T PRK05557 100 MRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNP 150 (248)
T ss_pred ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCC
Confidence 567889999999999999999999999999887778999999987765543
No 191
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.65 E-value=2.2e-15 Score=104.18 Aligned_cols=119 Identities=16% Similarity=0.136 Sum_probs=98.1
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|+++.|+....+++.+.....+. ++.++.+|++|++++.+.+. +++|++ +|.. ...++.
T Consensus 19 a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~------~~id~vi~~ag~~-~~~~~~ 90 (257)
T PRK09291 19 ALRLARKGHNVIAGVQIAPQVTALRAEAARRGL-ALRVEKLDLTDAIDRAQAAE------WDVDVLLNNAGIG-EAGAVV 90 (257)
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cceEEEeeCCCHHHHHHHhc------CCCCEEEECCCcC-CCcCcc
Confidence 567888999999999998777777666665554 58899999999988876542 378988 6665 346777
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~ 128 (147)
+.+.++|+..+++|+.+++.+++.++|.+.+.+.++||++||..+..+.+
T Consensus 91 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~ 140 (257)
T PRK09291 91 DIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGP 140 (257)
T ss_pred cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCC
Confidence 88999999999999999999999999999888778999999988766543
No 192
>PRK09135 pteridine reductase; Provisional
Probab=99.63 E-value=6.1e-15 Score=101.34 Aligned_cols=126 Identities=17% Similarity=0.075 Sum_probs=99.9
Q ss_pred CccccccCCcEEEEeecC-hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927 1 MKRSNQVHYSMGEATTKD-EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~ 76 (147)
++++|+++|++|++++|+ ....+++.+.+.......+.++.+|++|.+++.++++.+.+.++++|++ +|.. ...+
T Consensus 22 l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~-~~~~ 100 (249)
T PRK09135 22 IARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFGRLDALVNNASSF-YPTP 100 (249)
T ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC-CCCC
Confidence 356788999999999986 4455666666655433357889999999999999999999999999998 6654 2245
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~ 128 (147)
+.+.+.++++..+++|+.+++.+.+++.|.+.+. ++.+++++|..+..+.+
T Consensus 101 ~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 151 (249)
T PRK09135 101 LGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ-RGAIVNITDIHAERPLK 151 (249)
T ss_pred hhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC-CeEEEEEeChhhcCCCC
Confidence 5667788999999999999999999999998765 37888888866655443
No 193
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.63 E-value=8e-15 Score=100.55 Aligned_cols=125 Identities=22% Similarity=0.203 Sum_probs=102.2
Q ss_pred ccccccCCcEEEEeecC-hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 2 KRSNQVHYSMGEATTKD-EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
++.|.++|++|++..|+ ....+.+.+.+...+. ++.++.+|++|++++.++++++.+.++.+|++ +|.. ...++
T Consensus 23 ~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~-~~~~~ 100 (249)
T PRK12825 23 ALRLARAGADVVVHYRSDEEAAEELVEAVEALGR-RAQAVQADVTDKAALEAAVAAAVERFGRIDILVNNAGIF-EDKPL 100 (249)
T ss_pred HHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECCcCCHHHHHHHHHHHHHHcCCCCEEEECCccC-CCCCh
Confidence 56788899998776665 4445555566655554 58899999999999999999998888999999 6654 44566
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~ 128 (147)
.+.+.++|+..+++|+.+++.+++.++|.+.+.+.+++|++||..+..+.+
T Consensus 101 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~ 151 (249)
T PRK12825 101 ADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWP 151 (249)
T ss_pred hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCC
Confidence 677889999999999999999999999999887778999999988776543
No 194
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.63 E-value=9.9e-16 Score=104.63 Aligned_cols=127 Identities=19% Similarity=0.182 Sum_probs=94.7
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.... .. .++..+.+|++++ ++++.+.++++|++ +|......++.
T Consensus 22 a~~l~~~G~~v~~~~r~~~~~---------~~-~~~~~~~~D~~~~------~~~~~~~~~~id~lv~~ag~~~~~~~~~ 85 (235)
T PRK06550 22 ARAFLAQGAQVYGVDKQDKPD---------LS-GNFHFLQLDLSDD------LEPLFDWVPSVDILCNTAGILDDYKPLL 85 (235)
T ss_pred HHHHHHCCCEEEEEeCCcccc---------cC-CcEEEEECChHHH------HHHHHHhhCCCCEEEECCCCCCCCCCcc
Confidence 567888999999999875321 12 2578899999887 44555566899998 66543335667
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC------chhhhccccchhhhhcc
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT------NEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~------~~~~~~~~~~~~al~~e 146 (147)
+.+.++|++.+++|+.+++.+++.++|.|.+++.|+||++||..+..+.+. .+.+...+.. ++++|
T Consensus 86 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~~ 157 (235)
T PRK06550 86 DTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTK--QLALD 157 (235)
T ss_pred cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHHHHHHHHH--HHHHH
Confidence 788999999999999999999999999998877799999999887665433 2344445554 45444
No 195
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.60 E-value=6.4e-15 Score=100.53 Aligned_cols=107 Identities=11% Similarity=0.040 Sum_probs=89.1
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+... ... ..++.+|++|++++.++++++.+.+ ++|++ +|.. ...++.
T Consensus 20 a~~l~~~G~~v~~~~r~~~~---------~~~---~~~~~~D~~~~~~~~~~~~~~~~~~-~~d~vi~~ag~~-~~~~~~ 85 (234)
T PRK07577 20 SLRLANLGHQVIGIARSAID---------DFP---GELFACDLADIEQTAATLAQINEIH-PVDAIVNNVGIA-LPQPLG 85 (234)
T ss_pred HHHHHHCCCEEEEEeCCccc---------ccC---ceEEEeeCCCHHHHHHHHHHHHHhC-CCcEEEECCCCC-CCCChH
Confidence 56788899999999998643 111 2467899999999999999998876 68988 6655 335666
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~ 122 (147)
+.+.++|++.+++|+.+++.+.+.++|.|++++.++||++||..
T Consensus 86 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~ 129 (234)
T PRK07577 86 KIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRA 129 (234)
T ss_pred HCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccc
Confidence 78899999999999999999999999999888778999999975
No 196
>PRK07578 short chain dehydrogenase; Provisional
Probab=99.60 E-value=8e-15 Score=97.94 Aligned_cols=99 Identities=18% Similarity=0.115 Sum_probs=78.7
Q ss_pred EEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeE
Q 040927 39 FHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRI 115 (147)
Q Consensus 39 ~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~i 115 (147)
.+.||++|++++++++++ ++++|++ +|.. ...++.+.+.++|++.+++|+.+++++++.++|+|.+. |+|
T Consensus 35 ~~~~D~~~~~~~~~~~~~----~~~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--g~i 107 (199)
T PRK07578 35 DVQVDITDPASIRALFEK----VGKVDAVVSAAGKV-HFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDG--GSF 107 (199)
T ss_pred ceEecCCChHHHHHHHHh----cCCCCEEEECCCCC-CCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CeE
Confidence 367999999999888765 4789998 6765 44677788999999999999999999999999999753 789
Q ss_pred EEEcCCCCCCcCCCc------hhhhccccchhhhhcc
Q 040927 116 VNASSSMGKLKNITN------EWAKGVLSDWMRCRRS 146 (147)
Q Consensus 116 v~isS~~~~~~~~~~------~~~~~~~~~~~al~~e 146 (147)
+++||..+..+.+.. +++...|.. +++.|
T Consensus 108 v~iss~~~~~~~~~~~~Y~~sK~a~~~~~~--~la~e 142 (199)
T PRK07578 108 TLTSGILSDEPIPGGASAATVNGALEGFVK--AAALE 142 (199)
T ss_pred EEEcccccCCCCCCchHHHHHHHHHHHHHH--HHHHH
Confidence 999998887665443 345566665 66655
No 197
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=99.59 E-value=3.6e-15 Score=98.40 Aligned_cols=125 Identities=20% Similarity=0.138 Sum_probs=94.1
Q ss_pred ccccccCCc-EEEEeecCh---hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc
Q 040927 2 KRSNQVHYS-MGEATTKDE---KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW 74 (147)
Q Consensus 2 ~~~l~~~G~-~v~l~~r~~---~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~ 74 (147)
+++|+++|. +|++++|+. ...++..++++..+. ++.++.||++|++++.++++.+.+.+++++++ +|.. ..
T Consensus 17 a~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~-~v~~~~~Dv~d~~~v~~~~~~~~~~~~~i~gVih~ag~~-~~ 94 (181)
T PF08659_consen 17 ARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGA-RVEYVQCDVTDPEAVAAALAQLRQRFGPIDGVIHAAGVL-AD 94 (181)
T ss_dssp HHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT--EEEEEE--TTSHHHHHHHHHTSHTTSS-EEEEEE--------
T ss_pred HHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCC-ceeeeccCccCHHHHHHHHHHHHhccCCcceeeeeeeee-cc
Confidence 566777765 699999983 345678888888876 79999999999999999999999999999998 6665 44
Q ss_pred hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCchh
Q 040927 75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNEW 132 (147)
Q Consensus 75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~ 132 (147)
.++.+.+.++++.++...+.+...+.+.+.+ ..-..+|.+||+++..|.+++..
T Consensus 95 ~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~~l~~~i~~SSis~~~G~~gq~~ 148 (181)
T PF08659_consen 95 APIQDQTPDEFDAVLAPKVRGLWNLHEALEN----RPLDFFILFSSISSLLGGPGQSA 148 (181)
T ss_dssp B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT----TTTSEEEEEEEHHHHTT-TTBHH
T ss_pred cccccCCHHHHHHHHhhhhhHHHHHHHHhhc----CCCCeEEEECChhHhccCcchHh
Confidence 7888999999999999999999999998765 23357999999999988887764
No 198
>PRK08017 oxidoreductase; Provisional
Probab=99.58 E-value=2.8e-14 Score=98.55 Aligned_cols=119 Identities=22% Similarity=0.208 Sum_probs=96.5
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhc-CCccEE---ecCCCcchhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQF-GKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~l---ag~~~~~~~~ 77 (147)
++.|+++|++|++++|+.+.++.+ ... .+..+.||++|.+++.++++.+.+.. +.+|++ +|.. ...++
T Consensus 19 a~~l~~~g~~v~~~~r~~~~~~~~----~~~---~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ag~~-~~~~~ 90 (256)
T PRK08017 19 ALELKRRGYRVLAACRKPDDVARM----NSL---GFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNAGFG-VYGPL 90 (256)
T ss_pred HHHHHHCCCEEEEEeCCHHHhHHH----HhC---CCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECCCCC-Cccch
Confidence 567888999999999998765543 222 36778999999999999998887654 678887 5654 33566
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~ 128 (147)
.+.+.+++++.+++|+.|++.+++.++|.|.+.+.++||++||..+..+.+
T Consensus 91 ~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~ 141 (256)
T PRK08017 91 STISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTP 141 (256)
T ss_pred hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCC
Confidence 788999999999999999999999999999888778999999987776543
No 199
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.58 E-value=2.1e-14 Score=98.55 Aligned_cols=116 Identities=17% Similarity=0.084 Sum_probs=91.2
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+..+++.+.. ...++.+|+++++++.++++. ++++|++ +|.. ...+..
T Consensus 26 a~~l~~~g~~V~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~----~~~~d~vi~~ag~~-~~~~~~ 94 (245)
T PRK07060 26 AVALAQRGARVVAAARNAAALDRLAGET------GCEPLRLDVGDDAAIRAALAA----AGAFDGLVNCAGIA-SLESAL 94 (245)
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCeEEEecCCCHHHHHHHHHH----hCCCCEEEECCCCC-CCCChh
Confidence 4567889999999999987666554433 256788999999888777654 4789998 6654 335556
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-CCeEEEEcCCCCCCcCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-SPRIVNASSSMGKLKNI 128 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~isS~~~~~~~~ 128 (147)
+.+.++|++.+++|+.+++.+++.+++.+.+.. .++||++||..+..+.+
T Consensus 95 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~ 145 (245)
T PRK07060 95 DMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLP 145 (245)
T ss_pred hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCC
Confidence 788899999999999999999999999987554 47999999988766543
No 200
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.58 E-value=1e-14 Score=99.19 Aligned_cols=116 Identities=20% Similarity=0.207 Sum_probs=92.1
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc-chhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN-WYKM 77 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~-~~~~ 77 (147)
++.|+++|++|++++|+.+..+++ ...+ ++.++.+|++|+++++++++.+.+ +++|++ +|.... ..++
T Consensus 18 a~~l~~~G~~V~~~~r~~~~~~~~----~~~~--~~~~~~~D~~d~~~~~~~~~~~~~--~~id~vi~~ag~~~~~~~~~ 89 (225)
T PRK08177 18 VDRLLERGWQVTATVRGPQQDTAL----QALP--GVHIEKLDMNDPASLDQLLQRLQG--QRFDLLFVNAGISGPAHQSA 89 (225)
T ss_pred HHHHHhCCCEEEEEeCCCcchHHH----Hhcc--ccceEEcCCCCHHHHHHHHHHhhc--CCCCEEEEcCcccCCCCCCc
Confidence 577889999999999997665433 2222 467788999999999999988754 479998 665422 2456
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK 126 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~ 126 (147)
.+.+.++++..+++|+.+++.+.+.++|.+... .+.++++||..+..+
T Consensus 90 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~iv~~ss~~g~~~ 137 (225)
T PRK08177 90 ADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG-QGVLAFMSSQLGSVE 137 (225)
T ss_pred ccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc-CCEEEEEccCccccc
Confidence 678899999999999999999999999998754 478999999877654
No 201
>PRK08264 short chain dehydrogenase; Validated
Probab=99.58 E-value=2.2e-14 Score=98.17 Aligned_cols=116 Identities=25% Similarity=0.248 Sum_probs=94.3
Q ss_pred ccccccCCc-EEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 2 KRSNQVHYS-MGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 2 ~~~l~~~G~-~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
++.|+++|+ +|++++|+.+.+++ .+. ++.++.+|++|++++.++++. ++++|++ +|......++
T Consensus 23 a~~l~~~G~~~V~~~~r~~~~~~~-------~~~-~~~~~~~D~~~~~~~~~~~~~----~~~id~vi~~ag~~~~~~~~ 90 (238)
T PRK08264 23 VEQLLARGAAKVYAAARDPESVTD-------LGP-RVVPLQLDVTDPASVAAAAEA----ASDVTILVNNAGIFRTGSLL 90 (238)
T ss_pred HHHHHHCCcccEEEEecChhhhhh-------cCC-ceEEEEecCCCHHHHHHHHHh----cCCCCEEEECCCcCCCCCcc
Confidence 567888999 89999998765443 233 588999999999998877654 4689998 6663344667
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~ 129 (147)
.+.+.++|...+++|+.+++.+.+.++|.+.+.+.+++|++||..+..+.++
T Consensus 91 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~ 142 (238)
T PRK08264 91 LEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPN 142 (238)
T ss_pred ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCC
Confidence 7889999999999999999999999999998877789999999887765443
No 202
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.57 E-value=7.8e-14 Score=95.40 Aligned_cols=117 Identities=15% Similarity=0.086 Sum_probs=94.5
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|.++|++|++++|+.+..+++.+++...+ ++..+.+|+++++++.++++++...++++|.+ +|.... .+..
T Consensus 22 a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ii~~ag~~~~-~~~~ 98 (238)
T PRK05786 22 AYFALKEGAQVCINSRNENKLKRMKKTLSKYG--NIHYVVGDVSSTESARNVIEKAAKVLNAIDGLVVTVGGYVE-DTVE 98 (238)
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCcCC-CchH
Confidence 56788899999999999888777766665543 47889999999999999999998888899988 554322 2222
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL 125 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~ 125 (147)
+.++++..+++|+.+++.+.+.++|.|.+ ++++|++||..+..
T Consensus 99 --~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~ 141 (238)
T PRK05786 99 --EFSGLEEMLTNHIKIPLYAVNASLRFLKE--GSSIVLVSSMSGIY 141 (238)
T ss_pred --HHHHHHHHHHHhchHHHHHHHHHHHHHhc--CCEEEEEecchhcc
Confidence 23889999999999999999999999865 37899999987643
No 203
>PRK06953 short chain dehydrogenase; Provisional
Probab=99.56 E-value=4.4e-14 Score=95.90 Aligned_cols=115 Identities=25% Similarity=0.219 Sum_probs=89.9
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC-cchhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD-NWYKM 77 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~-~~~~~ 77 (147)
++.|+++|++|++++|+.+..+++ ... .+.++.+|+++.++++++++.+.. +++|++ +|... ...++
T Consensus 18 a~~L~~~G~~v~~~~r~~~~~~~~----~~~---~~~~~~~D~~~~~~v~~~~~~~~~--~~~d~vi~~ag~~~~~~~~~ 88 (222)
T PRK06953 18 VRQYRADGWRVIATARDAAALAAL----QAL---GAEALALDVADPASVAGLAWKLDG--EALDAAVYVAGVYGPRTEGV 88 (222)
T ss_pred HHHHHhCCCEEEEEECCHHHHHHH----Hhc---cceEEEecCCCHHHHHHHHHHhcC--CCCCEEEECCCcccCCCCCc
Confidence 567888999999999997665543 222 256789999999999998777643 478998 66542 22445
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK 126 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~ 126 (147)
.+.+.++|+..+++|+.+++.+++.++|+|.+. +|+++++||..+..+
T Consensus 89 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~ 136 (222)
T PRK06953 89 EPITREDFDAVMHTNVLGPMQLLPILLPLVEAA-GGVLAVLSSRMGSIG 136 (222)
T ss_pred ccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc-CCeEEEEcCcccccc
Confidence 567899999999999999999999999998664 588999999877554
No 204
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=99.56 E-value=5.8e-14 Score=93.50 Aligned_cols=127 Identities=19% Similarity=0.109 Sum_probs=102.9
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC---cc
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD---NW 74 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~---~~ 74 (147)
+++.|+++|+++.+++.++ ++++-.+++.+.-+ ...+++||+++.+++++++.++.+++|++|++ .|..+ -.
T Consensus 24 IAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~-s~~v~~cDV~~d~~i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~ 101 (259)
T COG0623 24 IAKALAEQGAELAFTYQGE-RLEKRVEELAEELG-SDLVLPCDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELK 101 (259)
T ss_pred HHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhcc-CCeEEecCCCCHHHHHHHHHHHHHhhCcccEEEEEeccCChHHhC
Confidence 3678899999999999987 55555555544332 36789999999999999999999999999999 33321 13
Q ss_pred hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCch
Q 040927 75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNE 131 (147)
Q Consensus 75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~ 131 (147)
+.+.+++.+.|...+++...+...+.+.+.|.|.. +|+||.+|...+.+..|...
T Consensus 102 G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~--ggSiltLtYlgs~r~vPnYN 156 (259)
T COG0623 102 GDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN--GGSILTLTYLGSERVVPNYN 156 (259)
T ss_pred CcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC--CCcEEEEEeccceeecCCCc
Confidence 56777999999999999999999999999999976 48999999888776665543
No 205
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=99.56 E-value=2.3e-14 Score=97.89 Aligned_cols=130 Identities=23% Similarity=0.247 Sum_probs=92.7
Q ss_pred ccccccC--CcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC----
Q 040927 2 KRSNQVH--YSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD---- 72 (147)
Q Consensus 2 ~~~l~~~--G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~---- 72 (147)
++.|+++ ++.|++..|+... . . .. .++.++.||++|+++++++ .++++++|++ +|...
T Consensus 17 a~~l~~~~~~~~v~~~~~~~~~--~----~--~~-~~~~~~~~Dls~~~~~~~~----~~~~~~id~li~~aG~~~~~~~ 83 (235)
T PRK09009 17 VKQLLERYPDATVHATYRHHKP--D----F--QH-DNVQWHALDVTDEAEIKQL----SEQFTQLDWLINCVGMLHTQDK 83 (235)
T ss_pred HHHHHHhCCCCEEEEEccCCcc--c----c--cc-CceEEEEecCCCHHHHHHH----HHhcCCCCEEEECCcccccccc
Confidence 4556666 4556666665421 1 1 12 2578899999999988774 3456899998 67542
Q ss_pred -cchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCC---------cCCCchhhhccccchhh
Q 040927 73 -NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL---------KNITNEWAKGVLSDWMR 142 (147)
Q Consensus 73 -~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~---------~~~~~~~~~~~~~~~~a 142 (147)
+..++.+.+.+.|++.+++|+.+++.+++.++|.|.+++.++|+++||..+.. .+..++.+...|.. +
T Consensus 84 ~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~Y~asK~a~~~~~~--~ 161 (235)
T PRK09009 84 GPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSYRASKAALNMFLK--T 161 (235)
T ss_pred CcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcchhhhhHHHHHHHHH--H
Confidence 12456778889999999999999999999999999887778999999866533 23334556666666 6
Q ss_pred hhcc
Q 040927 143 CRRS 146 (147)
Q Consensus 143 l~~e 146 (147)
|++|
T Consensus 162 la~e 165 (235)
T PRK09009 162 LSIE 165 (235)
T ss_pred HHHH
Confidence 6654
No 206
>PRK12742 oxidoreductase; Provisional
Probab=99.56 E-value=6e-14 Score=95.91 Aligned_cols=110 Identities=16% Similarity=0.103 Sum_probs=84.7
Q ss_pred ccccccCCcEEEEeec-ChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 2 KRSNQVHYSMGEATTK-DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
++.|+++|++|+++.+ +.+..+++.+++ ....+.+|++|++++.+++. .++++|++ +|.. ...+.
T Consensus 23 a~~l~~~G~~v~~~~~~~~~~~~~l~~~~------~~~~~~~D~~~~~~~~~~~~----~~~~id~li~~ag~~-~~~~~ 91 (237)
T PRK12742 23 VRRFVTDGANVRFTYAGSKDAAERLAQET------GATAVQTDSADRDAVIDVVR----KSGALDILVVNAGIA-VFGDA 91 (237)
T ss_pred HHHHHHCCCEEEEecCCCHHHHHHHHHHh------CCeEEecCCCCHHHHHHHHH----HhCCCcEEEECCCCC-CCCCc
Confidence 5678899999988876 444444443332 25677899999988877664 35789998 6654 23455
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~ 124 (147)
.+.+.++|++.+++|+.+++.+++.++|.|.. .|+||++||..+.
T Consensus 92 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~ 136 (237)
T PRK12742 92 LELDADDIDRLFKINIHAPYHASVEAARQMPE--GGRIIIIGSVNGD 136 (237)
T ss_pred ccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc--CCeEEEEeccccc
Confidence 57788999999999999999999999999864 3799999998774
No 207
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.55 E-value=6e-15 Score=94.49 Aligned_cols=123 Identities=20% Similarity=0.213 Sum_probs=102.1
Q ss_pred cccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCC-----Ccc
Q 040927 3 RSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLP-----DNW 74 (147)
Q Consensus 3 ~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~-----~~~ 74 (147)
..|+++|+.|++.+-..++.++..+++ |+ ++.+.++|+++++++...+...+.+||++|.+ +|+. ...
T Consensus 27 erlakqgasv~lldlp~skg~~vakel---g~-~~vf~padvtsekdv~aala~ak~kfgrld~~vncagia~a~ktyn~ 102 (260)
T KOG1199|consen 27 ERLAKQGASVALLDLPQSKGADVAKEL---GG-KVVFTPADVTSEKDVRAALAKAKAKFGRLDALVNCAGIAYAFKTYNV 102 (260)
T ss_pred HHHHhcCceEEEEeCCcccchHHHHHh---CC-ceEEeccccCcHHHHHHHHHHHHhhccceeeeeeccceeeeeeeeee
Confidence 457889999999998888888888887 44 79999999999999999999999999999998 6642 122
Q ss_pred hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC------CCeEEEEcCCCCCCcCCC
Q 040927 75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD------SPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~~~iv~isS~~~~~~~~~ 129 (147)
..-...+.|++++.+++|+.|+|+.++.-.-.|-++. +|.|||..|+++..+..+
T Consensus 103 ~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~g 163 (260)
T KOG1199|consen 103 QKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTG 163 (260)
T ss_pred cccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccc
Confidence 3334567899999999999999999999988886542 589999999998766433
No 208
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.54 E-value=1.2e-14 Score=100.11 Aligned_cols=112 Identities=19% Similarity=0.194 Sum_probs=88.3
Q ss_pred ccccccCCcEEEEeecCh-hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 2 KRSNQVHYSMGEATTKDE-KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
++.|+++|++|++++|+. ...+.+.++++..+. ++..+.+|++|++++.++++++.+.++.+|++ +|.... .
T Consensus 23 ~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~-~-- 98 (248)
T PRK07806 23 AKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGG-RASAVGADLTDEESVAALMDTAREEFGGLDALVLNASGGME-S-- 98 (248)
T ss_pred HHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHhCCCCcEEEECCCCCCC-C--
Confidence 567888999999999975 346666667766554 58889999999999999999999888999987 554311 1
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~ 123 (147)
. .+++..+++|+.+++++++.+.|.|.+ +++||++||..+
T Consensus 99 -~---~~~~~~~~vn~~~~~~l~~~~~~~~~~--~~~iv~isS~~~ 138 (248)
T PRK07806 99 -G---MDEDYAMRLNRDAQRNLARAALPLMPA--GSRVVFVTSHQA 138 (248)
T ss_pred -C---CCcceeeEeeeHHHHHHHHHHHhhccC--CceEEEEeCchh
Confidence 1 124567899999999999999999864 378999999654
No 209
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.53 E-value=9.4e-15 Score=100.41 Aligned_cols=98 Identities=29% Similarity=0.371 Sum_probs=80.2
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|++++|+.+..+ + ..++.||++|.+++.++++++. +++|++ ||....
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~-------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~~---- 61 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMT-----L-------DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPGT---- 61 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhh-----h-------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCCC----
Confidence 57889999999999999876531 1 2457899999999999988764 689998 765421
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~ 124 (147)
+.|+..+++|+.+++.+++.++|.|.+. |+||++||.++.
T Consensus 62 -----~~~~~~~~vN~~~~~~l~~~~~~~~~~~--g~Iv~isS~~~~ 101 (241)
T PRK12428 62 -----APVELVARVNFLGLRHLTEALLPRMAPG--GAIVNVASLAGA 101 (241)
T ss_pred -----CCHHHhhhhchHHHHHHHHHHHHhccCC--cEEEEeCcHHhh
Confidence 2478999999999999999999999653 899999998875
No 210
>PRK06720 hypothetical protein; Provisional
Probab=99.53 E-value=2.1e-13 Score=88.93 Aligned_cols=118 Identities=15% Similarity=0.086 Sum_probs=92.4
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+.++++.+++...+. +..++.+|+++.+++.++++++.+.+|++|++ +|......++.
T Consensus 33 a~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iDilVnnAG~~~~~~~~~ 111 (169)
T PRK06720 33 ALLLAKQGAKVIVTDIDQESGQATVEEITNLGG-EALFVSYDMEKQGDWQRVISITLNAFSRIDMLFQNAGLYKIDSIFS 111 (169)
T ss_pred HHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCccc
Confidence 566888999999999998888777788876554 57788999999999999999999999999999 77664445555
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-------CCeEEEEcCCCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD-------SPRIVNASSSMG 123 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-------~~~iv~isS~~~ 123 (147)
+.+.+++. .+|+.+++..++.+.+.|.+++ .|++..|||.+.
T Consensus 112 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (169)
T PRK06720 112 RQQENDSN---VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQ 160 (169)
T ss_pred ccchhHhh---ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccc
Confidence 55555533 6778888889999999887653 467777776553
No 211
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=99.53 E-value=8.4e-14 Score=118.68 Aligned_cols=100 Identities=20% Similarity=0.139 Sum_probs=83.4
Q ss_pred HHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHH
Q 040927 25 AVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCE 101 (147)
Q Consensus 25 ~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 101 (147)
+.+++...|. ++.++.||++|.+++.+++.++.+. +++|++ ||.. ....+.+.+.++|++++++|+.|++++++
T Consensus 2085 ~la~l~~~G~-~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~-~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~ 2161 (2582)
T TIGR02813 2085 ALAAFKAAGA-SAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVL-ADKHIQDKTLEEFNAVYGTKVDGLLSLLA 2161 (2582)
T ss_pred HHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccC-CCCCcccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3444555565 6889999999999999999999877 789999 7776 34678889999999999999999999999
Q ss_pred HHHHhhccCCCCeEEEEcCCCCCCcCCCch
Q 040927 102 ALIPLLQLSDSPRIVNASSSMGKLKNITNE 131 (147)
Q Consensus 102 ~~~~~l~~~~~~~iv~isS~~~~~~~~~~~ 131 (147)
.+.+.+. +.||++||++|..+.+++.
T Consensus 2162 al~~~~~----~~IV~~SSvag~~G~~gqs 2187 (2582)
T TIGR02813 2162 ALNAENI----KLLALFSSAAGFYGNTGQS 2187 (2582)
T ss_pred HHHHhCC----CeEEEEechhhcCCCCCcH
Confidence 9887653 4699999999998876654
No 212
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.50 E-value=1.9e-13 Score=88.98 Aligned_cols=121 Identities=18% Similarity=0.088 Sum_probs=93.2
Q ss_pred ccccccCCc-EEEEeecChhhHHHH---HHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc
Q 040927 2 KRSNQVHYS-MGEATTKDEKRGLAA---VEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW 74 (147)
Q Consensus 2 ~~~l~~~G~-~v~l~~r~~~~~~~~---~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~ 74 (147)
++.|.++|+ .|++++|+....+.. .++++..+. ++.++.+|++++++++++++++...++++|.+ +|.. ..
T Consensus 17 ~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~-~~ 94 (180)
T smart00822 17 ARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGA-EVTVVACDVADRAALAAALAAIPARLGPLRGVIHAAGVL-DD 94 (180)
T ss_pred HHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCC-eEEEEECCCCCHHHHHHHHHHHHHHcCCeeEEEEccccC-Cc
Confidence 456777886 588888876443332 345554454 68889999999999999999998888999999 6654 33
Q ss_pred hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCC
Q 040927 75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNI 128 (147)
Q Consensus 75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~ 128 (147)
.++.+.+.++++..+++|+.+++.+.+.+.+ .+.++++++||..+..+.+
T Consensus 95 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~ii~~ss~~~~~~~~ 144 (180)
T smart00822 95 GLLANLTPERFAAVLAPKVDGAWNLHELTRD----LPLDFFVLFSSVAGVLGNP 144 (180)
T ss_pred cccccCCHHHHHHhhchHhHHHHHHHHHhcc----CCcceEEEEccHHHhcCCC
Confidence 5566788899999999999999999999843 3457899999988776653
No 213
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=99.46 E-value=9.1e-13 Score=89.18 Aligned_cols=117 Identities=26% Similarity=0.259 Sum_probs=97.9
Q ss_pred cEEEEeecChhhHHHHHHHHHhcCC---CceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc---------
Q 040927 10 SMGEATTKDEKRGLAAVEKLKNSGC---DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW--------- 74 (147)
Q Consensus 10 ~~v~l~~r~~~~~~~~~~~l~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~--------- 74 (147)
.+++++.|+.+++++....+.+..+ .++.++.+|++|..++.++.+++.++|.++|.+ ||..+..
T Consensus 33 ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf 112 (341)
T KOG1478|consen 33 LTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVF 112 (341)
T ss_pred EEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHHHHHhhhccEEEEccccCCCCcccHHHHHH
Confidence 3588889999999999999987654 247889999999999999999999999999999 6632111
Q ss_pred -----------------hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc
Q 040927 75 -----------------YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK 126 (147)
Q Consensus 75 -----------------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~ 126 (147)
......+.+++..+|++|++|+|.+.+.+.|++..++...+|.+||..+...
T Consensus 113 ~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll~~~~~~~lvwtSS~~a~kk 181 (341)
T KOG1478|consen 113 GLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLLCHSDNPQLVWTSSRMARKK 181 (341)
T ss_pred HHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHhhcCCCCeEEEEeecccccc
Confidence 1122456788999999999999999999999999988889999999887654
No 214
>PRK12367 short chain dehydrogenase; Provisional
Probab=99.44 E-value=6.7e-13 Score=91.55 Aligned_cols=108 Identities=15% Similarity=0.067 Sum_probs=75.3
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.....+ .. ..+ ....+.+|++|.+++.+ .++++|++ ||.. . ..
T Consensus 31 a~~l~~~G~~Vi~~~r~~~~~~~---~~-~~~--~~~~~~~D~~~~~~~~~-------~~~~iDilVnnAG~~-~---~~ 93 (245)
T PRK12367 31 TKAFRAKGAKVIGLTHSKINNSE---SN-DES--PNEWIKWECGKEESLDK-------QLASLDVLILNHGIN-P---GG 93 (245)
T ss_pred HHHHHHCCCEEEEEECCchhhhh---hh-ccC--CCeEEEeeCCCHHHHHH-------hcCCCCEEEECCccC-C---cC
Confidence 56788999999999998622111 11 112 13567899999987653 35789999 7754 2 12
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccC---CCCeEEEEcCCCCCCc
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLS---DSPRIVNASSSMGKLK 126 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~---~~~~iv~isS~~~~~~ 126 (147)
+.+.++|++.+++|+.+++++++.++|.|.++ +++.+++.+|.++..+
T Consensus 94 ~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~ 144 (245)
T PRK12367 94 RQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP 144 (245)
T ss_pred CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC
Confidence 46789999999999999999999999999763 2233444456555433
No 215
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.39 E-value=3.6e-12 Score=86.50 Aligned_cols=116 Identities=19% Similarity=0.213 Sum_probs=89.9
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++ ++|++++|+.+..++..++. . .+.++.+|++|++++.++++.+ +++|++ +|.. ...++.
T Consensus 20 ~~~l~~~-~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~D~~~~~~~~~~~~~~----~~id~vi~~ag~~-~~~~~~ 88 (227)
T PRK08219 20 ARELAPT-HTLLLGGRPAERLDELAAEL----P-GATPFPVDLTDPEAIAAAVEQL----GRLDVLVHNAGVA-DLGPVA 88 (227)
T ss_pred HHHHHhh-CCEEEEeCCHHHHHHHHHHh----c-cceEEecCCCCHHHHHHHHHhc----CCCCEEEECCCcC-CCCCcc
Confidence 4567777 89999999977655544332 1 3778899999999888876543 578998 6654 334566
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~ 129 (147)
+.+.++|++.+++|+.+++.+.+.+++.+.++. +++|++||..+..+.++
T Consensus 89 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~v~~ss~~~~~~~~~ 138 (227)
T PRK08219 89 ESTVDEWRATLEVNVVAPAELTRLLLPALRAAH-GHVVFINSGAGLRANPG 138 (227)
T ss_pred cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEcchHhcCcCCC
Confidence 778899999999999999999999999988764 78999999887655433
No 216
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=99.32 E-value=2.9e-11 Score=88.60 Aligned_cols=104 Identities=19% Similarity=0.168 Sum_probs=77.2
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|+++|++|++++|+.+++++. +..... .+..+.+|++|++++.+. ++++|++ +|.... .
T Consensus 195 A~~La~~G~~Vi~l~r~~~~l~~~---~~~~~~-~v~~v~~Dvsd~~~v~~~-------l~~IDiLInnAGi~~~----~ 259 (406)
T PRK07424 195 LKELHQQGAKVVALTSNSDKITLE---INGEDL-PVKTLHWQVGQEAALAEL-------LEKVDILIINHGINVH----G 259 (406)
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHH---HhhcCC-CeEEEEeeCCCHHHHHHH-------hCCCCEEEECCCcCCC----C
Confidence 567888999999999987655432 222222 367888999998876543 3679988 675422 2
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCC----CeEEEEcC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDS----PRIVNASS 120 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~----~~iv~isS 120 (147)
+.+.+++++.+++|+.|++.+++.++|.|++++. +.+|++|+
T Consensus 260 ~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss 305 (406)
T PRK07424 260 ERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE 305 (406)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc
Confidence 5678999999999999999999999999987642 34666665
No 217
>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.15 E-value=6.1e-10 Score=74.45 Aligned_cols=92 Identities=20% Similarity=0.152 Sum_probs=75.9
Q ss_pred EEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh--cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC-
Q 040927 38 IFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML--TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD- 111 (147)
Q Consensus 38 ~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~- 111 (147)
.....|+++..-+..+++..+...|..|++ ||...+..... ..+.++|++.+++|+++++.+.+.++|.++++.
T Consensus 57 v~~~g~~~e~~~l~al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~ 136 (253)
T KOG1204|consen 57 VHVVGDITEEQLLGALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPV 136 (253)
T ss_pred ceechHHHHHHHHHHHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCc
Confidence 344567777777788888888888888888 88776655544 678899999999999999999999999999883
Q ss_pred CCeEEEEcCCCCCCcCCC
Q 040927 112 SPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 112 ~~~iv~isS~~~~~~~~~ 129 (147)
.+.+||+||.++..|+++
T Consensus 137 ~~~vVnvSS~aav~p~~~ 154 (253)
T KOG1204|consen 137 NGNVVNVSSLAAVRPFSS 154 (253)
T ss_pred cCeEEEecchhhhccccH
Confidence 689999999999988743
No 218
>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function. One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].
Probab=99.12 E-value=6.3e-10 Score=78.01 Aligned_cols=140 Identities=15% Similarity=0.049 Sum_probs=99.1
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCc--------------cEE
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKL--------------DIL 67 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i--------------d~l 67 (147)
+..|.++|+.|+++..+.+.......+ +...+.....|..++.++...+.++.+.+... ..+
T Consensus 21 a~DLeRRGFIV~v~~~~~ed~~~ve~e----~~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p~~p~~~~~~h~l~L~sv 96 (299)
T PF08643_consen 21 ALDLERRGFIVYVTVSSAEDEKYVESE----DRPDIRPLWLDDSDPSSIHASLSRFASLLSRPHVPFPGAPPHHLQLKSV 96 (299)
T ss_pred HHHHhhCCeEEEEEeCCHHHHHHHHhc----cCCCCCCcccCCCCCcchHHHHHHHHHHhcCCCCCCCCCCCceeEEEEE
Confidence 456789999999999987654433222 22247777788888888888887777654322 222
Q ss_pred ---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhcc---CCCCeEEEEcCCCCCCcCCCch------hhhc
Q 040927 68 ---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQL---SDSPRIVNASSSMGKLKNITNE------WAKG 135 (147)
Q Consensus 68 ---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~---~~~~~iv~isS~~~~~~~~~~~------~~~~ 135 (147)
.....+.+|+..++.++|.+.++.|+..++.++|.++|+|+. .+...|++.-|+.+....|-.. .+..
T Consensus 97 i~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ssl~~PfhspE~~~~~al~ 176 (299)
T PF08643_consen 97 IFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISSSLNPPFHSPESIVSSALS 176 (299)
T ss_pred EEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhhccCCCccCHHHHHHHHHH
Confidence 223335678889999999999999999999999999999998 4333444444766665544432 4677
Q ss_pred cccchhhhhccC
Q 040927 136 VLSDWMRCRRSI 147 (147)
Q Consensus 136 ~~~~~~al~~e~ 147 (147)
+|.. +||+|+
T Consensus 177 ~~~~--~LrrEl 186 (299)
T PF08643_consen 177 SFFT--SLRREL 186 (299)
T ss_pred HHHH--HHHHHh
Confidence 7777 899985
No 219
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=98.96 E-value=5e-09 Score=74.96 Aligned_cols=109 Identities=14% Similarity=0.070 Sum_probs=77.1
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcC-CCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSG-CDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~ 76 (147)
+++.|.++|++|+++.|+....+.....+...+ ..++.++.+|++|++++.++++ .+|++ ||....
T Consensus 21 l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~vih~A~~~~~--- 90 (325)
T PLN02989 21 IVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------GCETVFHTASPVAI--- 90 (325)
T ss_pred HHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------CCCEEEEeCCCCCC---
Confidence 356788899999999888765444322222111 1257889999999998877764 47887 664311
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~ 124 (147)
..+.+.+...+++|+.+++++++++.+.+ +.++||++||..+.
T Consensus 91 --~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~~~iv~~SS~~~~ 133 (325)
T PLN02989 91 --TVKTDPQVELINPAVNGTINVLRTCTKVS---SVKRVILTSSMAAV 133 (325)
T ss_pred --CCCCChHHHHHHHHHHHHHHHHHHHHHcC---CceEEEEecchhhe
Confidence 22335578899999999999999998764 23689999997654
No 220
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=98.84 E-value=4e-08 Score=74.60 Aligned_cols=105 Identities=13% Similarity=0.147 Sum_probs=77.5
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHh-----cC---CCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecC
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKN-----SG---CDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGL 70 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~-----~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~ 70 (147)
++.|+++|++|++++|+.+.++.+.+++.. .+ ..++.++.+|++|.+++.+ .++.+|++ +|.
T Consensus 97 Ar~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~-------aLggiDiVVn~AG~ 169 (576)
T PLN03209 97 VRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGP-------ALGNASVVICCIGA 169 (576)
T ss_pred HHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHH-------HhcCCCEEEEcccc
Confidence 567888999999999999888777665543 12 1247889999999888754 34678988 554
Q ss_pred CCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927 71 PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124 (147)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~ 124 (147)
... ...+|...+++|+.+..++++++... +.++||++||..+.
T Consensus 170 ~~~-------~v~d~~~~~~VN~~Gt~nLl~Aa~~a----gVgRIV~VSSiga~ 212 (576)
T PLN03209 170 SEK-------EVFDVTGPYRIDYLATKNLVDAATVA----KVNHFILVTSLGTN 212 (576)
T ss_pred ccc-------cccchhhHHHHHHHHHHHHHHHHHHh----CCCEEEEEccchhc
Confidence 311 11246788899999999999987653 45789999998763
No 221
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=98.80 E-value=1.4e-07 Score=68.52 Aligned_cols=125 Identities=13% Similarity=-0.002 Sum_probs=80.3
Q ss_pred ccccccCCcEEEEeecChhh------------HHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE--
Q 040927 2 KRSNQVHYSMGEATTKDEKR------------GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL-- 67 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~------------~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l-- 67 (147)
++.| +.|++++++++..+. .+.+.+.++..+. .+..+.||++++++++++++.+.+.+|++|++
T Consensus 60 A~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~-~a~~i~~DVss~E~v~~lie~I~e~~G~IDiLVn 137 (398)
T PRK13656 60 AAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGL-YAKSINGDAFSDEIKQKVIELIKQDLGQVDLVVY 137 (398)
T ss_pred HHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 4567 889998888753321 1234445555554 47789999999999999999999999999999
Q ss_pred -ecCCCcch--------------------h-------------hhcccHHHHHHhHHHhhh-hHHHHHHHH--HHhhccC
Q 040927 68 -GGLPDNWY--------------------K-------------MLTQTYELAEKCIQTNYY-GNKRMCEAL--IPLLQLS 110 (147)
Q Consensus 68 -ag~~~~~~--------------------~-------------~~~~~~~~~~~~~~~n~~-~~~~l~~~~--~~~l~~~ 110 (147)
+|...... + +...+.++++.++.+.=. .-...++++ .+.|.
T Consensus 138 SaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~vMggedw~~Wi~al~~a~lla-- 215 (398)
T PRK13656 138 SLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKVMGGEDWELWIDALDEAGVLA-- 215 (398)
T ss_pred CCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHhhccchHHHHHHHHHhccccc--
Confidence 34331111 0 113445566666555443 223333333 34443
Q ss_pred CCCeEEEEcCCCCCCcCCCc
Q 040927 111 DSPRIVNASSSMGKLKNITN 130 (147)
Q Consensus 111 ~~~~iv~isS~~~~~~~~~~ 130 (147)
.++++|.+|+..+....|..
T Consensus 216 ~g~~~va~TY~G~~~t~p~Y 235 (398)
T PRK13656 216 EGAKTVAYSYIGPELTHPIY 235 (398)
T ss_pred CCcEEEEEecCCcceeeccc
Confidence 45899999998887776655
No 222
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=98.73 E-value=1.3e-07 Score=68.54 Aligned_cols=112 Identities=19% Similarity=0.111 Sum_probs=75.8
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|.++|++|++++|+....+.+...+.. + .++.++.+|++|.+++.+++. .+|++ |+........
T Consensus 26 l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~-~~~~~~~~Dl~~~~~~~~~~~-------~~d~Vih~A~~~~~~~~~ 96 (353)
T PLN02896 26 LVKLLLQRGYTVHATLRDPAKSLHLLSKWKE-G-DRLRLFRADLQEEGSFDEAVK-------GCDGVFHVAASMEFDVSS 96 (353)
T ss_pred HHHHHHHCCCEEEEEeCChHHHHHHHHhhcc-C-CeEEEEECCCCCHHHHHHHHc-------CCCEEEECCccccCCccc
Confidence 3567888999999999987666555555432 2 258889999999988877653 46877 5544221111
Q ss_pred hcccHHHH--HHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927 78 LTQTYELA--EKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124 (147)
Q Consensus 78 ~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~ 124 (147)
...+.+.+ ...+++|+.++..+++++.+.. ..+++|++||....
T Consensus 97 ~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~~~~~v~~SS~~vy 142 (353)
T PLN02896 97 DHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---TVKRVVFTSSISTL 142 (353)
T ss_pred cccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---CccEEEEEechhhc
Confidence 12233333 4677888999999999987653 23579999997544
No 223
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=98.71 E-value=1.2e-07 Score=68.54 Aligned_cols=107 Identities=18% Similarity=0.135 Sum_probs=75.4
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|.++|++|++++|+..........+.. +. ++.++.+|++|.+++.++++.. .+|++ ||....
T Consensus 20 l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~-~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vih~A~~~~~---- 88 (349)
T TIGR02622 20 LSLWLLELGAEVYGYSLDPPTSPNLFELLNL-AK-KIEDHFGDIRDAAKLRKAIAEF-----KPEIVFHLAAQPLV---- 88 (349)
T ss_pred HHHHHHHCCCEEEEEeCCCccchhHHHHHhh-cC-CceEEEccCCCHHHHHHHHhhc-----CCCEEEECCccccc----
Confidence 3567888999999999886554433333322 22 4777899999999998887753 57887 553211
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~ 122 (147)
..+.+++...+++|+.+++.+++++... ...+++|++||..
T Consensus 89 -~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~~~~~iv~~SS~~ 129 (349)
T TIGR02622 89 -RKSYADPLETFETNVMGTVNLLEAIRAI---GSVKAVVNVTSDK 129 (349)
T ss_pred -ccchhCHHHHHHHhHHHHHHHHHHHHhc---CCCCEEEEEechh
Confidence 2344567788999999999999987532 1236899999964
No 224
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=98.69 E-value=2.4e-07 Score=66.52 Aligned_cols=106 Identities=19% Similarity=0.200 Sum_probs=72.7
Q ss_pred ccccccCC--cEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927 2 KRSNQVHY--SMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 2 ~~~l~~~G--~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~ 76 (147)
++.|+++| ++|++.+|+......+...+. . .++.++.+|++|++++.++++ .+|++ ||.... +
T Consensus 21 ~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~--~-~~~~~v~~Dl~d~~~l~~~~~-------~iD~Vih~Ag~~~~--~ 88 (324)
T TIGR03589 21 ISRLLENYNPKKIIIYSRDELKQWEMQQKFP--A-PCLRFFIGDVRDKERLTRALR-------GVDYVVHAAALKQV--P 88 (324)
T ss_pred HHHHHHhCCCcEEEEEcCChhHHHHHHHHhC--C-CcEEEEEccCCCHHHHHHHHh-------cCCEEEECcccCCC--c
Confidence 45677765 789998887655444333332 1 258889999999998877653 47888 664321 2
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK 126 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~ 126 (147)
..+.+. ...+++|+.++.++++++.+. +.++||++||.....|
T Consensus 89 ~~~~~~---~~~~~~Nv~g~~~ll~aa~~~----~~~~iV~~SS~~~~~p 131 (324)
T TIGR03589 89 AAEYNP---FECIRTNINGAQNVIDAAIDN----GVKRVVALSTDKAANP 131 (324)
T ss_pred hhhcCH---HHHHHHHHHHHHHHHHHHHHc----CCCEEEEEeCCCCCCC
Confidence 222232 468999999999999998863 3468999999765544
No 225
>PLN02583 cinnamoyl-CoA reductase
Probab=98.69 E-value=1.6e-07 Score=66.63 Aligned_cols=105 Identities=13% Similarity=-0.021 Sum_probs=70.9
Q ss_pred ccccccCCcEEEEeecChh--hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927 2 KRSNQVHYSMGEATTKDEK--RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~--~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~ 76 (147)
++.|.++|++|+++.|+.. ...+....+...+. ++.++.+|++|.+++...+ ...|.+ ++.. .
T Consensus 23 v~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~-~~~~~~~Dl~d~~~~~~~l-------~~~d~v~~~~~~~---~- 90 (297)
T PLN02583 23 VKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEE-RLKVFDVDPLDYHSILDAL-------KGCSGLFCCFDPP---S- 90 (297)
T ss_pred HHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCC-ceEEEEecCCCHHHHHHHH-------cCCCEEEEeCccC---C-
Confidence 5678899999999998632 22233333322222 5788899999998876544 235555 2221 1
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~ 124 (147)
..+ .+++..+++|+.+++++++++.+.+ +.++||++||.++.
T Consensus 91 --~~~-~~~~~~~~~nv~gt~~ll~aa~~~~---~v~riV~~SS~~a~ 132 (297)
T PLN02583 91 --DYP-SYDEKMVDVEVRAAHNVLEACAQTD---TIEKVVFTSSLTAV 132 (297)
T ss_pred --ccc-ccHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEecchHhe
Confidence 111 2467899999999999999998764 23689999998764
No 226
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=98.53 E-value=5e-07 Score=65.11 Aligned_cols=110 Identities=14% Similarity=0.040 Sum_probs=73.4
Q ss_pred CccccccCCcEEEEeecChhh-----HHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC
Q 040927 1 MKRSNQVHYSMGEATTKDEKR-----GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD 72 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~ 72 (147)
+++.|.++|++|++++|+... ++.+.......+ .++.++.+|++|.+++.++++.. .+|++ ||...
T Consensus 22 l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~A~~~~ 95 (340)
T PLN02653 22 LTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNK-ARMKLHYGDLSDASSLRRWLDDI-----KPDEVYNLAAQSH 95 (340)
T ss_pred HHHHHHHCCCEEEEEecccccccccchhhhcccccccc-CceEEEEecCCCHHHHHHHHHHc-----CCCEEEECCcccc
Confidence 356788899999999886532 222211111112 24788999999999998888764 47887 65432
Q ss_pred cchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCC-CeEEEEcCC
Q 040927 73 NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDS-PRIVNASSS 121 (147)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~iv~isS~ 121 (147)
. . ...+..+..+++|+.++..+++++.+...+.++ .++|++||.
T Consensus 96 ~-~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~ 140 (340)
T PLN02653 96 V-A----VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSS 140 (340)
T ss_pred h-h----hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccH
Confidence 2 1 122345677899999999999999988654311 268888874
No 227
>PLN02214 cinnamoyl-CoA reductase
Probab=98.47 E-value=1.4e-06 Score=63.03 Aligned_cols=101 Identities=14% Similarity=0.105 Sum_probs=70.2
Q ss_pred ccccccCCcEEEEeecChhhHHH-HHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLA-AVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~-~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
++.|.++|++|.++.|+.+.... ....+.... .++.++.+|++|.+++.++++ .+|++ |+.. .
T Consensus 27 ~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~-------~~d~Vih~A~~~-~---- 93 (342)
T PLN02214 27 VKILLERGYTVKGTVRNPDDPKNTHLRELEGGK-ERLILCKADLQDYEALKAAID-------GCDGVFHTASPV-T---- 93 (342)
T ss_pred HHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCC-CcEEEEecCcCChHHHHHHHh-------cCCEEEEecCCC-C----
Confidence 56788899999999998654322 122332212 247888999999988877664 47887 5432 1
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~ 124 (147)
+++...+++|+.++.++++++... +.++||++||..+.
T Consensus 94 -----~~~~~~~~~nv~gt~~ll~aa~~~----~v~r~V~~SS~~av 131 (342)
T PLN02214 94 -----DDPEQMVEPAVNGAKFVINAAAEA----KVKRVVITSSIGAV 131 (342)
T ss_pred -----CCHHHHHHHHHHHHHHHHHHHHhc----CCCEEEEeccceee
Confidence 134678899999999999998653 33589999997544
No 228
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=98.46 E-value=1.1e-06 Score=63.68 Aligned_cols=109 Identities=15% Similarity=0.099 Sum_probs=70.3
Q ss_pred CccccccCCcEEE-EeecChhh--HHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc
Q 040927 1 MKRSNQVHYSMGE-ATTKDEKR--GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW 74 (147)
Q Consensus 1 ~~~~l~~~G~~v~-l~~r~~~~--~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~ 74 (147)
+++.|.++|++++ +.++.... .... ..+. .. .++.++.+|++|.+++.++++. ..+|++ ||....
T Consensus 17 l~~~L~~~g~~~v~~~~~~~~~~~~~~~-~~~~-~~-~~~~~~~~Dl~d~~~~~~~~~~-----~~~D~Vih~A~~~~~- 87 (355)
T PRK10217 17 LVRYIINETSDAVVVVDKLTYAGNLMSL-APVA-QS-ERFAFEKVDICDRAELARVFTE-----HQPDCVMHLAAESHV- 87 (355)
T ss_pred HHHHHHHcCCCEEEEEecCccccchhhh-hhcc-cC-CceEEEECCCcChHHHHHHHhh-----cCCCEEEECCcccCc-
Confidence 3567888898755 44443221 1111 1111 12 2477889999999988887765 258888 554321
Q ss_pred hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhc---c--CCCCeEEEEcCCC
Q 040927 75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQ---L--SDSPRIVNASSSM 122 (147)
Q Consensus 75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~---~--~~~~~iv~isS~~ 122 (147)
..+.++++..+++|+.++..+++++.+.|. . .+..++|++||.+
T Consensus 88 ----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~ 136 (355)
T PRK10217 88 ----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDE 136 (355)
T ss_pred ----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchh
Confidence 223456788999999999999999987542 1 1224799999854
No 229
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=98.44 E-value=1.4e-06 Score=62.99 Aligned_cols=111 Identities=16% Similarity=0.114 Sum_probs=70.8
Q ss_pred CccccccCCcEEEEeecChhh-----HHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC
Q 040927 1 MKRSNQVHYSMGEATTKDEKR-----GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD 72 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~ 72 (147)
+++.|.++|++|++++|+... ++.+.+........++.++.+|++|.+++.++++.. .+|++ |+...
T Consensus 16 l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~ViH~Aa~~~ 90 (343)
T TIGR01472 16 LAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI-----KPTEIYNLAAQSH 90 (343)
T ss_pred HHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC-----CCCEEEECCcccc
Confidence 356788899999999987532 222211111111124788999999999988887764 47887 55432
Q ss_pred cchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927 73 NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122 (147)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~ 122 (147)
... +.+.-...+++|+.++..+++++.+.-.+ +..++|++||..
T Consensus 91 ~~~-----~~~~~~~~~~~n~~gt~~ll~a~~~~~~~-~~~~~v~~SS~~ 134 (343)
T TIGR01472 91 VKV-----SFEIPEYTADVDGIGTLRLLEAVRTLGLI-KSVKFYQASTSE 134 (343)
T ss_pred cch-----hhhChHHHHHHHHHHHHHHHHHHHHhCCC-cCeeEEEeccHH
Confidence 211 11222466788999999999998874211 113689999854
No 230
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=98.42 E-value=1.8e-06 Score=61.74 Aligned_cols=106 Identities=12% Similarity=0.064 Sum_probs=70.8
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcC-CCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSG-CDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
++.|.++|++|+++.|+....+.........+ ..++.++.+|++|++++.++++ .+|++ |+.... .
T Consensus 22 ~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~vih~A~~~~~-~-- 91 (322)
T PLN02986 22 VKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE-------GCDAVFHTASPVFF-T-- 91 (322)
T ss_pred HHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh-------CCCEEEEeCCCcCC-C--
Confidence 46788899999999998765443332222111 1257889999999988877764 37887 554311 1
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~ 123 (147)
.. +.....+++|+.++..+++++.... +.++||++||...
T Consensus 92 -~~--~~~~~~~~~nv~gt~~ll~~~~~~~---~v~rvV~~SS~~~ 131 (322)
T PLN02986 92 -VK--DPQTELIDPALKGTINVLNTCKETP---SVKRVILTSSTAA 131 (322)
T ss_pred -CC--CchhhhhHHHHHHHHHHHHHHHhcC---CccEEEEecchhh
Confidence 11 1235678999999999999876431 2358999999764
No 231
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=98.41 E-value=2.2e-06 Score=61.59 Aligned_cols=107 Identities=13% Similarity=0.087 Sum_probs=69.4
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|.++|++|++++|...........+...+..++.++.+|++|.+++.+++.. ..+|++ ||.... ..
T Consensus 17 ~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~vvh~a~~~~~-~~-- 88 (338)
T PRK10675 17 CVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD-----HAIDTVIHFAGLKAV-GE-- 88 (338)
T ss_pred HHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc-----CCCCEEEECCccccc-cc--
Confidence 5678889999998876433222222333332222467889999999888777653 368888 554321 11
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~ 122 (147)
..+.....+++|+.++..+++++.. .+.+++|++||..
T Consensus 89 --~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~ 126 (338)
T PRK10675 89 --SVQKPLEYYDNNVNGTLRLISAMRA----ANVKNLIFSSSAT 126 (338)
T ss_pred --hhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHH
Confidence 1123356788999999999887543 3446799999864
No 232
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=98.40 E-value=9.2e-07 Score=62.13 Aligned_cols=114 Identities=18% Similarity=0.102 Sum_probs=76.2
Q ss_pred CccccccCCc-EEEEeecChhhHHHHHHHHHhcCC-CceE----EEEecCCCHHHHHHHHHHHHhhcCCccEE--ecCCC
Q 040927 1 MKRSNQVHYS-MGEATTKDEKRGLAAVEKLKNSGC-DNVI----FHLLDVTDPASVDSLVHFVSSQFGKLDIL--GGLPD 72 (147)
Q Consensus 1 ~~~~l~~~G~-~v~l~~r~~~~~~~~~~~l~~~~~-~~~~----~~~~D~~~~~~~~~~~~~~~~~~g~id~l--ag~~~ 72 (147)
|++++++.+. +|+++++++..+-++..++..... .++. .+.+|++|.+.+..++++ .++|++ |+-..
T Consensus 14 L~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~-----~~pdiVfHaAA~K 88 (293)
T PF02719_consen 14 LVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEE-----YKPDIVFHAAALK 88 (293)
T ss_dssp HHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT-------T-SEEEE-----
T ss_pred HHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhh-----cCCCEEEEChhcC
Confidence 4677777774 699999999999999888864332 2343 346799999888877754 378999 44442
Q ss_pred cchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC
Q 040927 73 NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127 (147)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~ 127 (147)
. .++.+..+ .+.+.+|+.|+.++++++..+ +-.++|++|+.-+..|.
T Consensus 89 h-Vpl~E~~p---~eav~tNv~GT~nv~~aa~~~----~v~~~v~ISTDKAv~Pt 135 (293)
T PF02719_consen 89 H-VPLMEDNP---FEAVKTNVLGTQNVAEAAIEH----GVERFVFISTDKAVNPT 135 (293)
T ss_dssp --HHHHCCCH---HHHHHHHCHHHHHHHHHHHHT----T-SEEEEEEECGCSS--
T ss_pred C-CChHHhCH---HHHHHHHHHHHHHHHHHHHHc----CCCEEEEccccccCCCC
Confidence 3 45555544 567999999999999999876 33579999998877654
No 233
>PLN02572 UDP-sulfoquinovose synthase
Probab=98.37 E-value=4.1e-06 Score=62.65 Aligned_cols=112 Identities=10% Similarity=-0.050 Sum_probs=73.2
Q ss_pred CccccccCCcEEEEeecChh---h----H---------HHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCc
Q 040927 1 MKRSNQVHYSMGEATTKDEK---R----G---------LAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKL 64 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~---~----~---------~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 64 (147)
|++.|+++|++|+++++... . . .+-.+.+......++.++.+|++|.+++.++++.. ++
T Consensus 63 Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~~~v~~~l~~~-----~~ 137 (442)
T PLN02572 63 TALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDFEFLSEAFKSF-----EP 137 (442)
T ss_pred HHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCHHHHHHHHHhC-----CC
Confidence 46778889999999864210 0 0 00111111111124889999999999988887763 58
Q ss_pred cEE---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927 65 DIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122 (147)
Q Consensus 65 d~l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~ 122 (147)
|++ |+.. . .+....+.++++..+++|+.|++++++++...-. +.++|++||..
T Consensus 138 D~ViHlAa~~-~-~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv---~~~~V~~SS~~ 193 (442)
T PLN02572 138 DAVVHFGEQR-S-APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAP---DCHLVKLGTMG 193 (442)
T ss_pred CEEEECCCcc-c-ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCC---CccEEEEecce
Confidence 888 4332 1 2333445566788899999999999999866421 14699999875
No 234
>PLN02650 dihydroflavonol-4-reductase
Probab=98.36 E-value=3.9e-06 Score=60.79 Aligned_cols=107 Identities=16% Similarity=0.053 Sum_probs=71.6
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCC-CceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGC-DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~ 76 (147)
+++.|.++|++|++++|+.+........+...+. .++.++.+|++|.+.+.++++ .+|.+ |+.... .
T Consensus 21 l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------~~d~ViH~A~~~~~-~- 91 (351)
T PLN02650 21 LVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------GCTGVFHVATPMDF-E- 91 (351)
T ss_pred HHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------CCCEEEEeCCCCCC-C-
Confidence 3567888999999999987655544332221111 147888999999988877654 36777 543211 1
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~ 123 (147)
.. +.++..+++|+.++.++++++.+.. ..++||++||...
T Consensus 92 --~~--~~~~~~~~~Nv~gt~~ll~aa~~~~---~~~r~v~~SS~~~ 131 (351)
T PLN02650 92 --SK--DPENEVIKPTVNGMLSIMKACAKAK---TVRRIVFTSSAGT 131 (351)
T ss_pred --CC--CchhhhhhHHHHHHHHHHHHHHhcC---CceEEEEecchhh
Confidence 11 2235678999999999999987753 1257999999743
No 235
>PLN00198 anthocyanidin reductase; Provisional
Probab=98.33 E-value=4.8e-06 Score=60.01 Aligned_cols=106 Identities=14% Similarity=0.114 Sum_probs=69.7
Q ss_pred CccccccCCcEEEEeecChhhHHHHH--HHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcch
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAV--EKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWY 75 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~--~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~ 75 (147)
+++.|.++|++|+++.|+........ ..+... + ++.++.+|++|.+++.+++. .+|++ |+.. .
T Consensus 25 l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~-~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~A~~~-~-- 92 (338)
T PLN00198 25 LIKLLLQKGYAVNTTVRDPENQKKIAHLRALQEL-G-DLKIFGADLTDEESFEAPIA-------GCDLVFHVATPV-N-- 92 (338)
T ss_pred HHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCC-C-ceEEEEcCCCChHHHHHHHh-------cCCEEEEeCCCC-c--
Confidence 35678889999998888764433221 112111 1 47888999999988776653 46887 5532 1
Q ss_pred hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927 76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124 (147)
Q Consensus 76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~ 124 (147)
.. ..+.+...+++|+.++..+++++.+.. +.+++|++||.+..
T Consensus 93 -~~--~~~~~~~~~~~nv~g~~~ll~a~~~~~---~~~~~v~~SS~~~~ 135 (338)
T PLN00198 93 -FA--SEDPENDMIKPAIQGVHNVLKACAKAK---SVKRVILTSSAAAV 135 (338)
T ss_pred -cC--CCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEeecceee
Confidence 11 112235678999999999999986642 23689999997643
No 236
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=98.30 E-value=4.2e-06 Score=59.56 Aligned_cols=110 Identities=18% Similarity=0.120 Sum_probs=78.0
Q ss_pred ccccccCCcEEEEeecChhhHHH--HHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE--ecCCCcchhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLA--AVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--GGLPDNWYKM 77 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~--~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l--ag~~~~~~~~ 77 (147)
++.|.++||+|..+.|+.+.-+. .+.+++.... +...+..|+.|+++++..++. .|++ .+.+..+..
T Consensus 23 vk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~-~l~l~~aDL~d~~sf~~ai~g-------cdgVfH~Asp~~~~~- 93 (327)
T KOG1502|consen 23 VKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKE-RLKLFKADLLDEGSFDKAIDG-------CDGVFHTASPVDFDL- 93 (327)
T ss_pred HHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcc-cceEEeccccccchHHHHHhC-------CCEEEEeCccCCCCC-
Confidence 56789999999999999876333 3455554443 689999999999999887643 6777 333312221
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKN 127 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~ 127 (147)
.+ --.+.++..+.|+.++++++...= .-.+||++||.++....
T Consensus 94 --~~--~e~~li~pav~Gt~nVL~ac~~~~---sVkrvV~TSS~aAv~~~ 136 (327)
T KOG1502|consen 94 --ED--PEKELIDPAVKGTKNVLEACKKTK---SVKRVVYTSSTAAVRYN 136 (327)
T ss_pred --CC--cHHhhhhHHHHHHHHHHHHHhccC---CcceEEEeccHHHhccC
Confidence 11 113688999999999999986542 23679999999887654
No 237
>PRK08309 short chain dehydrogenase; Provisional
Probab=98.30 E-value=3.1e-06 Score=55.71 Aligned_cols=64 Identities=9% Similarity=-0.056 Sum_probs=53.6
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
++.|++.|++|++++|+.+..+++...+.. +. ++..+.+|++|++++.++++.+.+.++++|++
T Consensus 16 a~~L~~~G~~V~v~~R~~~~~~~l~~~l~~-~~-~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l 79 (177)
T PRK08309 16 SLWLCEKGFHVSVIARREVKLENVKRESTT-PE-SITPLPLDYHDDDALKLAIKSTIEKNGPFDLA 79 (177)
T ss_pred HHHHHHCcCEEEEEECCHHHHHHHHHHhhc-CC-cEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence 567889999999999998877776655543 22 58889999999999999999999888999887
No 238
>PLN02240 UDP-glucose 4-epimerase
Probab=98.28 E-value=6.4e-06 Score=59.57 Aligned_cols=106 Identities=17% Similarity=0.226 Sum_probs=69.7
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHH----hcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLK----NSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW 74 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~ 74 (147)
++.|.++|++|++++|......+....+. ..+ .++.++.+|++|++++.++++. ..+|++ +|....
T Consensus 22 ~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~l~~~~~~-----~~~d~vih~a~~~~~- 94 (352)
T PLN02240 22 VLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLG-DNLVFHKVDLRDKEALEKVFAS-----TRFDAVIHFAGLKAV- 94 (352)
T ss_pred HHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccC-ccceEEecCcCCHHHHHHHHHh-----CCCCEEEEccccCCc-
Confidence 56778889999998865322211111221 112 2578899999999998887765 267887 554321
Q ss_pred hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927 75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122 (147)
Q Consensus 75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~ 122 (147)
. .+.+++...+++|+.++..+++++.. .+.+++|++||..
T Consensus 95 ~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~ 134 (352)
T PLN02240 95 G----ESVAKPLLYYDNNLVGTINLLEVMAK----HGCKKLVFSSSAT 134 (352)
T ss_pred c----ccccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEccHH
Confidence 1 12345677899999999999887543 3346799999854
No 239
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.24 E-value=9.7e-06 Score=61.29 Aligned_cols=116 Identities=19% Similarity=0.092 Sum_probs=87.2
Q ss_pred ccccccCCcE-EEEeecChhhHHHHHHHHHhcCC-CceEEEEecCCCHHHHHHHHHHHHhhcCCccEE--ecCCCcchhh
Q 040927 2 KRSNQVHYSM-GEATTKDEKRGLAAVEKLKNSGC-DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--GGLPDNWYKM 77 (147)
Q Consensus 2 ~~~l~~~G~~-v~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l--ag~~~~~~~~ 77 (147)
|+++++.+.+ +++.+|++.++-.+..++....+ .+..++-+|+.|.+.++.+++.. ++|++ |+-... -|+
T Consensus 267 ~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~-----kvd~VfHAAA~KH-VPl 340 (588)
T COG1086 267 CRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH-----KVDIVFHAAALKH-VPL 340 (588)
T ss_pred HHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC-----CCceEEEhhhhcc-Ccc
Confidence 5566666555 88889999999999999987532 46888999999999998887653 78999 443322 444
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN 130 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~ 130 (147)
.+..+ .+.+.+|+.|+.++.+++...- -.++|.+|+.-+..|....
T Consensus 341 ~E~nP---~Eai~tNV~GT~nv~~aa~~~~----V~~~V~iSTDKAV~PtNvm 386 (588)
T COG1086 341 VEYNP---EEAIKTNVLGTENVAEAAIKNG----VKKFVLISTDKAVNPTNVM 386 (588)
T ss_pred hhcCH---HHHHHHhhHhHHHHHHHHHHhC----CCEEEEEecCcccCCchHh
Confidence 45444 6788999999999999997753 3569999998887764433
No 240
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=98.19 E-value=1.9e-06 Score=58.92 Aligned_cols=84 Identities=11% Similarity=0.040 Sum_probs=61.7
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|+++|++|+++++... +... ....+|+++.+++.++++.+.+.++++|++ ||.. ...++
T Consensus 31 IA~~la~~Ga~Vvlv~~~~~--------l~~~-----~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv~-d~~~~ 96 (227)
T TIGR02114 31 ITETFLSAGHEVTLVTTKRA--------LKPE-----PHPNLSIREIETTKDLLITLKELVQEHDILIHSMAVS-DYTPV 96 (227)
T ss_pred HHHHHHHCCCEEEEEcChhh--------cccc-----cCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEec-cccch
Confidence 36778899999999876311 1110 124589999999999999999999999999 7765 44678
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHH
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCE 101 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~ 101 (147)
.+.+.++|++++.+ +.+++.+
T Consensus 97 ~~~s~e~~~~~~~~---~~~~~~~ 117 (227)
T TIGR02114 97 YMTDLEQVQASDNL---NEFLSKQ 117 (227)
T ss_pred hhCCHHHHhhhcch---hhhhccc
Confidence 88999999987544 4444443
No 241
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=98.14 E-value=1.9e-05 Score=56.35 Aligned_cols=106 Identities=14% Similarity=0.065 Sum_probs=68.8
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcC-CCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSG-CDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~ 76 (147)
+++.|.++|++|+++.|+..............+ ..++.++.+|++|++++..+++ .+|++ |+.... .
T Consensus 20 l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d~Vih~A~~~~~-~- 90 (322)
T PLN02662 20 LVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD-------GCEGVFHTASPFYH-D- 90 (322)
T ss_pred HHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-------CCCEEEEeCCcccC-C-
Confidence 356788899999999987654332221111111 1257889999999988776654 46877 553311 1
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~ 122 (147)
... .....+++|+.++.++++++.... +..++|++||.+
T Consensus 91 --~~~--~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~v~~SS~~ 129 (322)
T PLN02662 91 --VTD--PQAELIDPAVKGTLNVLRSCAKVP---SVKRVVVTSSMA 129 (322)
T ss_pred --CCC--hHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEccCHH
Confidence 011 124678999999999999976542 235799999965
No 242
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=98.13 E-value=1.5e-05 Score=56.75 Aligned_cols=105 Identities=17% Similarity=0.092 Sum_probs=68.8
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|.++|++|+++++......+....+...+ ++..+.+|+++++++.++++. +.+|++ +|.... .+
T Consensus 16 ~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~-----~~~d~vv~~ag~~~~-~~-- 85 (328)
T TIGR01179 16 VRQLLESGHEVVVLDNLSNGSPEALKRGERIT--RVTFVEGDLRDRELLDRLFEE-----HKIDAVIHFAGLIAV-GE-- 85 (328)
T ss_pred HHHHHhCCCeEEEEeCCCccchhhhhhhcccc--ceEEEECCCCCHHHHHHHHHh-----CCCcEEEECccccCc-ch--
Confidence 56788899999888764332222222222222 477888999999998887763 478888 654322 11
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~ 122 (147)
..++..+.+..|+.++..+++.+.. .+.+++|++||..
T Consensus 86 --~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~ss~~ 123 (328)
T TIGR01179 86 --SVQDPLKYYRNNVVNTLNLLEAMQQ----TGVKKFIFSSSAA 123 (328)
T ss_pred --hhcCchhhhhhhHHHHHHHHHHHHh----cCCCEEEEecchh
Confidence 2234456788999999999887643 2346899998854
No 243
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=98.10 E-value=1.9e-05 Score=57.18 Aligned_cols=108 Identities=15% Similarity=0.059 Sum_probs=68.4
Q ss_pred ccccccCCcE-EEEeecCh--hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcch
Q 040927 2 KRSNQVHYSM-GEATTKDE--KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWY 75 (147)
Q Consensus 2 ~~~l~~~G~~-v~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~ 75 (147)
++.|.++|+. |+.+++.. ...+... .+.. + .++.++.+|++|.+++.++++. ..+|++ ||......
T Consensus 17 ~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~~-~-~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~vih~A~~~~~~~ 88 (352)
T PRK10084 17 VRHIINNTQDSVVNVDKLTYAGNLESLA-DVSD-S-ERYVFEHADICDRAELDRIFAQ-----HQPDAVMHLAAESHVDR 88 (352)
T ss_pred HHHHHHhCCCeEEEecCCCccchHHHHH-hccc-C-CceEEEEecCCCHHHHHHHHHh-----cCCCEEEECCcccCCcc
Confidence 5667778876 44455432 1222211 1211 2 2477889999999999888765 268888 55431111
Q ss_pred hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccC-----CCCeEEEEcCCC
Q 040927 76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLS-----DSPRIVNASSSM 122 (147)
Q Consensus 76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----~~~~iv~isS~~ 122 (147)
+....+..+++|+.++..+++++.+.|... +..++|++||..
T Consensus 89 -----~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~ 135 (352)
T PRK10084 89 -----SITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDE 135 (352)
T ss_pred -----hhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchh
Confidence 112346689999999999999998876421 124799999864
No 244
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=98.08 E-value=2.1e-05 Score=55.23 Aligned_cols=107 Identities=17% Similarity=0.068 Sum_probs=71.4
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
+++|.+.|++|++++.-...-.+.+... ...++..|+.|.+.+++++++ ..+|.+ ||...- +
T Consensus 17 v~~Ll~~G~~vvV~DNL~~g~~~~v~~~------~~~f~~gDi~D~~~L~~vf~~-----~~idaViHFAa~~~V-g--- 81 (329)
T COG1087 17 VRQLLKTGHEVVVLDNLSNGHKIALLKL------QFKFYEGDLLDRALLTAVFEE-----NKIDAVVHFAASISV-G--- 81 (329)
T ss_pred HHHHHHCCCeEEEEecCCCCCHHHhhhc------cCceEEeccccHHHHHHHHHh-----cCCCEEEECcccccc-c---
Confidence 5678899999999986443222222221 157899999999988888876 378877 665422 2
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNIT 129 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~ 129 (147)
.+.++=.+.++.|+.|+..|++++... +-..+|| ||.++.-|.|.
T Consensus 82 -ESv~~Pl~Yy~NNv~gTl~Ll~am~~~----gv~~~vF-SStAavYG~p~ 126 (329)
T COG1087 82 -ESVQNPLKYYDNNVVGTLNLIEAMLQT----GVKKFIF-SSTAAVYGEPT 126 (329)
T ss_pred -hhhhCHHHHHhhchHhHHHHHHHHHHh----CCCEEEE-ecchhhcCCCC
Confidence 233444678899999999999986554 3344664 55565555443
No 245
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=98.07 E-value=3e-05 Score=54.98 Aligned_cols=106 Identities=17% Similarity=0.074 Sum_probs=68.0
Q ss_pred ccccccCC--cEEEEeecChh-hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcch
Q 040927 2 KRSNQVHY--SMGEATTKDEK-RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWY 75 (147)
Q Consensus 2 ~~~l~~~G--~~v~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~ 75 (147)
++.|.+.| ++|++.+|... .-.+..+.+... .++.++.+|++|++++.++++.. .+|++ ++....
T Consensus 16 ~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vi~~a~~~~~-- 86 (317)
T TIGR01181 16 VRYILNEHPDAEVIVLDKLTYAGNLENLADLEDN--PRYRFVKGDIGDRELVSRLFTEH-----QPDAVVHFAAESHV-- 86 (317)
T ss_pred HHHHHHhCCCCEEEEecCCCcchhhhhhhhhccC--CCcEEEEcCCcCHHHHHHHHhhc-----CCCEEEEcccccCc--
Confidence 45566666 78888776321 111111222211 24778899999999998877542 58888 443311
Q ss_pred hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927 76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122 (147)
Q Consensus 76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~ 122 (147)
..+.+.++..+++|+.++..+++++...+. +.++|++||..
T Consensus 87 ---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~i~~Ss~~ 127 (317)
T TIGR01181 87 ---DRSISGPAAFIETNVVGTYTLLEAVRKYWH---EFRFHHISTDE 127 (317)
T ss_pred ---hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC---CceEEEeeccc
Confidence 123345667899999999999998876543 24699999854
No 246
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=97.99 E-value=1.6e-05 Score=56.71 Aligned_cols=98 Identities=19% Similarity=0.070 Sum_probs=67.5
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|.++|++|++++|+.+.... +. . ..+.++.+|++|.+++.++++ .+|++ ++....
T Consensus 17 ~~~L~~~g~~V~~~~r~~~~~~~----~~--~-~~~~~~~~D~~~~~~l~~~~~-------~~d~vi~~a~~~~~----- 77 (328)
T TIGR03466 17 VRLLLEQGEEVRVLVRPTSDRRN----LE--G-LDVEIVEGDLRDPASLRKAVA-------GCRALFHVAADYRL----- 77 (328)
T ss_pred HHHHHHCCCEEEEEEecCccccc----cc--c-CCceEEEeeCCCHHHHHHHHh-------CCCEEEEeceeccc-----
Confidence 56788899999999998654321 11 1 147789999999988776653 46777 443211
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~ 124 (147)
..++.+..+++|+.++..+++++... +.+++|++||....
T Consensus 78 --~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~SS~~~~ 117 (328)
T TIGR03466 78 --WAPDPEEMYAANVEGTRNLLRAALEA----GVERVVYTSSVATL 117 (328)
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHHHHh----CCCeEEEEechhhc
Confidence 11234667889999999999987643 34689999997643
No 247
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=97.93 E-value=7.1e-05 Score=55.23 Aligned_cols=105 Identities=14% Similarity=0.010 Sum_probs=67.6
Q ss_pred ccccccCCcEEEEeecChhhHHH--HHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLA--AVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~--~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~ 76 (147)
++.|.++|++|+++.|+....+. ..+++..... ++.++.+|++|++++.++++... +.+|++ +|.... .
T Consensus 77 ~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~-~v~~v~~Dl~d~~~l~~~~~~~~---~~~D~Vi~~aa~~~~-~- 150 (390)
T PLN02657 77 VRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELP-GAEVVFGDVTDADSLRKVLFSEG---DPVDVVVSCLASRTG-G- 150 (390)
T ss_pred HHHHHHCCCEEEEEEechhhccccchhhHHhhhcC-CceEEEeeCCCHHHHHHHHHHhC---CCCcEEEECCccCCC-C-
Confidence 56788899999999998754321 1112222222 47899999999999988876531 268888 443211 1
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~ 124 (147)
. ...+++|+.+...+++++. +.+.+++|++||....
T Consensus 151 ----~----~~~~~vn~~~~~~ll~aa~----~~gv~r~V~iSS~~v~ 186 (390)
T PLN02657 151 ----V----KDSWKIDYQATKNSLDAGR----EVGAKHFVLLSAICVQ 186 (390)
T ss_pred ----C----ccchhhHHHHHHHHHHHHH----HcCCCEEEEEeecccc
Confidence 1 1234667778777777764 3344689999997654
No 248
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=97.92 E-value=4.4e-05 Score=53.86 Aligned_cols=104 Identities=19% Similarity=0.188 Sum_probs=70.5
Q ss_pred ccccccCC--cEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927 2 KRSNQVHY--SMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 2 ~~~l~~~G--~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~ 76 (147)
+++|.++| ++|.+.++...... ...+...+ ...++.+|++|.+++.++++ ..|++ |+......
T Consensus 14 v~~Ll~~g~~~~Vr~~d~~~~~~~--~~~~~~~~--~~~~~~~Di~d~~~l~~a~~-------g~d~V~H~Aa~~~~~~- 81 (280)
T PF01073_consen 14 VRQLLERGYIYEVRVLDRSPPPKF--LKDLQKSG--VKEYIQGDITDPESLEEALE-------GVDVVFHTAAPVPPWG- 81 (280)
T ss_pred HHHHHHCCCceEEEEccccccccc--chhhhccc--ceeEEEeccccHHHHHHHhc-------CCceEEEeCccccccC-
Confidence 56788899 77888887654311 11222222 23489999999999988774 35777 44432211
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCc
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLK 126 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~ 126 (147)
....+..+++|+.|+-++++++... +-.++|++||......
T Consensus 82 -----~~~~~~~~~vNV~GT~nvl~aa~~~----~VkrlVytSS~~vv~~ 122 (280)
T PF01073_consen 82 -----DYPPEEYYKVNVDGTRNVLEAARKA----GVKRLVYTSSISVVFD 122 (280)
T ss_pred -----cccHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEEcCcceeEe
Confidence 2334778999999999999998753 4467999999886554
No 249
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=97.89 E-value=0.0001 Score=53.47 Aligned_cols=106 Identities=11% Similarity=-0.006 Sum_probs=65.9
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHH----hcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLK----NSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN 73 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~ 73 (147)
|++.|.++|++|++++|...........+. .....++.++.+|+.|.+++..+++ .+|++ |+....
T Consensus 31 lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~-------~~d~ViHlAa~~~~ 103 (348)
T PRK15181 31 LLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK-------NVDYVLHQAALGSV 103 (348)
T ss_pred HHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh-------CCCEEEECccccCc
Confidence 356778889999988875432222122221 1111247788999999877766653 36877 544322
Q ss_pred chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927 74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122 (147)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~ 122 (147)
.. +.++-...+++|+.|+.++++.+... +-.++|++||..
T Consensus 104 ~~-----~~~~~~~~~~~Nv~gt~nll~~~~~~----~~~~~v~~SS~~ 143 (348)
T PRK15181 104 PR-----SLKDPIATNSANIDGFLNMLTAARDA----HVSSFTYAASSS 143 (348)
T ss_pred hh-----hhhCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEeechH
Confidence 11 11223456899999999999987542 335799999864
No 250
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=97.88 E-value=0.00014 Score=49.39 Aligned_cols=102 Identities=21% Similarity=0.252 Sum_probs=72.0
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
++++|.++|+.|+...|+........... ++.++.+|+.|.+.++++++.. .+|.+ |+... .
T Consensus 14 l~~~l~~~g~~v~~~~~~~~~~~~~~~~~------~~~~~~~dl~~~~~~~~~~~~~-----~~d~vi~~a~~~~--~-- 78 (236)
T PF01370_consen 14 LVRQLLKKGHEVIVLSRSSNSESFEEKKL------NVEFVIGDLTDKEQLEKLLEKA-----NIDVVIHLAAFSS--N-- 78 (236)
T ss_dssp HHHHHHHTTTEEEEEESCSTGGHHHHHHT------TEEEEESETTSHHHHHHHHHHH-----TESEEEEEBSSSS--H--
T ss_pred HHHHHHHcCCccccccccccccccccccc------eEEEEEeecccccccccccccc-----CceEEEEeecccc--c--
Confidence 35678899999888887765433222221 5899999999999999988775 67888 54432 1
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~ 122 (147)
..+.+.....++.|+.++..+++.+... +..++|++||..
T Consensus 79 -~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~i~~sS~~ 118 (236)
T PF01370_consen 79 -PESFEDPEEIIEANVQGTRNLLEAAREA----GVKRFIFLSSAS 118 (236)
T ss_dssp -HHHHHSHHHHHHHHHHHHHHHHHHHHHH----TTSEEEEEEEGG
T ss_pred -cccccccccccccccccccccccccccc----cccccccccccc
Confidence 1122556777888999988888887654 335799999943
No 251
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=97.78 E-value=0.00015 Score=51.59 Aligned_cols=104 Identities=17% Similarity=0.083 Sum_probs=68.3
Q ss_pred cccccCCcEEEEeecC----hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcch
Q 040927 3 RSNQVHYSMGEATTKD----EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWY 75 (147)
Q Consensus 3 ~~l~~~G~~v~l~~r~----~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~ 75 (147)
-+|.++|+.|++++.- .+.+.+...... .+. ++.++..|++|.+.++++|+.. .+|.+ |+.... .
T Consensus 20 l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~-~~~-~v~f~~~Dl~D~~~L~kvF~~~-----~fd~V~Hfa~~~~v-g 91 (343)
T KOG1371|consen 20 LALLKRGYGVVIVDNLNNSYLESLKRVRQLLG-EGK-SVFFVEGDLNDAEALEKLFSEV-----KFDAVMHFAALAAV-G 91 (343)
T ss_pred HHHHhCCCcEEEEecccccchhHHHHHHHhcC-CCC-ceEEEEeccCCHHHHHHHHhhc-----CCceEEeehhhhcc-c
Confidence 4678899999999753 233333322222 233 6999999999999999988775 46666 443211 1
Q ss_pred hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927 76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122 (147)
Q Consensus 76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~ 122 (147)
.+.+.-....+.|+.|++.++..+..+ +-..+|+.||..
T Consensus 92 ----eS~~~p~~Y~~nNi~gtlnlLe~~~~~----~~~~~V~sssat 130 (343)
T KOG1371|consen 92 ----ESMENPLSYYHNNIAGTLNLLEVMKAH----NVKALVFSSSAT 130 (343)
T ss_pred ----hhhhCchhheehhhhhHHHHHHHHHHc----CCceEEEeccee
Confidence 122333678899999999998886544 345678777643
No 252
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=97.77 E-value=9.6e-05 Score=51.14 Aligned_cols=97 Identities=14% Similarity=0.153 Sum_probs=60.6
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCH-HHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDP-ASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
++.|.+.|++|+++.|+.+..++.. . .+. ++.++.+|++|. +++ .+.+. ..+|++ +|......+.
T Consensus 34 ~~~L~~~g~~V~~~~R~~~~~~~~~---~-~~~-~~~~~~~Dl~d~~~~l---~~~~~---~~~d~vi~~~g~~~~~~~~ 102 (251)
T PLN00141 34 VEQLLAKGFAVKAGVRDVDKAKTSL---P-QDP-SLQIVRADVTEGSDKL---VEAIG---DDSDAVICATGFRRSFDPF 102 (251)
T ss_pred HHHHHhCCCEEEEEecCHHHHHHhc---c-cCC-ceEEEEeeCCCCHHHH---HHHhh---cCCCEEEECCCCCcCCCCC
Confidence 4567788999999999876544322 1 122 488899999983 322 22221 268888 4433111111
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~ 122 (147)
..+++|+.++..+++++. +.+.++||++||..
T Consensus 103 ---------~~~~~n~~~~~~ll~a~~----~~~~~~iV~iSS~~ 134 (251)
T PLN00141 103 ---------APWKVDNFGTVNLVEACR----KAGVTRFILVSSIL 134 (251)
T ss_pred ---------CceeeehHHHHHHHHHHH----HcCCCEEEEEcccc
Confidence 124678888888888864 33457899999975
No 253
>PLN02427 UDP-apiose/xylose synthase
Probab=97.65 E-value=0.00029 Score=51.81 Aligned_cols=104 Identities=10% Similarity=0.042 Sum_probs=63.3
Q ss_pred ccccccC-CcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 2 KRSNQVH-YSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 2 ~~~l~~~-G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
++.|.++ |++|++++|+.+....+..........++.++.+|++|.+++.++++ .+|++ |+.... ...
T Consensus 31 v~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~-------~~d~ViHlAa~~~~-~~~ 102 (386)
T PLN02427 31 CEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK-------MADLTINLAAICTP-ADY 102 (386)
T ss_pred HHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh-------cCCEEEEcccccCh-hhh
Confidence 4567776 68999998876544332211000011258899999999888776653 36777 554322 111
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~ 122 (147)
. .+. ...+..|+.+...+++++... + .++|++||..
T Consensus 103 ~-~~~---~~~~~~n~~gt~~ll~aa~~~----~-~r~v~~SS~~ 138 (386)
T PLN02427 103 N-TRP---LDTIYSNFIDALPVVKYCSEN----N-KRLIHFSTCE 138 (386)
T ss_pred h-hCh---HHHHHHHHHHHHHHHHHHHhc----C-CEEEEEeeee
Confidence 1 111 234567999998888877532 2 5799999964
No 254
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.50 E-value=0.0013 Score=43.05 Aligned_cols=86 Identities=17% Similarity=0.128 Sum_probs=59.9
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
+++|.++|++|.++.|+.++.++ . .++.++.+|+.|++++.+.+. ..|.+ +|....
T Consensus 15 ~~~L~~~~~~V~~~~R~~~~~~~--------~-~~~~~~~~d~~d~~~~~~al~-------~~d~vi~~~~~~~~----- 73 (183)
T PF13460_consen 15 AKQLLRRGHEVTALVRSPSKAED--------S-PGVEIIQGDLFDPDSVKAALK-------GADAVIHAAGPPPK----- 73 (183)
T ss_dssp HHHHHHTTSEEEEEESSGGGHHH--------C-TTEEEEESCTTCHHHHHHHHT-------TSSEEEECCHSTTT-----
T ss_pred HHHHHHCCCEEEEEecCchhccc--------c-cccccceeeehhhhhhhhhhh-------hcchhhhhhhhhcc-----
Confidence 46788899999999999887665 2 269999999999977766553 56777 433311
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKL 125 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~ 125 (147)
+ ...++.++..+++.+..++|++||.....
T Consensus 74 ----~-------------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~ 103 (183)
T PF13460_consen 74 ----D-------------VDAAKNIIEAAKKAGVKRVVYLSSAGVYR 103 (183)
T ss_dssp ----H-------------HHHHHHHHHHHHHTTSSEEEEEEETTGTT
T ss_pred ----c-------------ccccccccccccccccccceeeeccccCC
Confidence 0 23345555556556667899999866544
No 255
>PLN02686 cinnamoyl-CoA reductase
Probab=97.42 E-value=0.0011 Score=48.65 Aligned_cols=106 Identities=11% Similarity=0.059 Sum_probs=64.8
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcC-----CCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSG-----CDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD 72 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~ 72 (147)
+++.|+++|++|+++.|+.+..+.+ .++...+ ..++.++.+|++|.+++.++++.+ |.+ ++...
T Consensus 69 lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~-------d~V~hlA~~~~ 140 (367)
T PLN02686 69 IVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGC-------AGVFHTSAFVD 140 (367)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhc-------cEEEecCeeec
Confidence 3567889999999988887655443 2332211 114778899999999988877643 333 33221
Q ss_pred cchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927 73 NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122 (147)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~ 122 (147)
... ... ......++|+.+...+++++... .+-.++|++||..
T Consensus 141 ~~~-~~~----~~~~~~~~nv~gt~~llea~~~~---~~v~r~V~~SS~~ 182 (367)
T PLN02686 141 PAG-LSG----YTKSMAELEAKASENVIEACVRT---ESVRKCVFTSSLL 182 (367)
T ss_pred ccc-ccc----ccchhhhhhHHHHHHHHHHHHhc---CCccEEEEeccHH
Confidence 111 000 01234567888888888886542 1234799999963
No 256
>CHL00194 ycf39 Ycf39; Provisional
Probab=97.27 E-value=0.0012 Score=47.38 Aligned_cols=93 Identities=12% Similarity=0.018 Sum_probs=60.9
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|.++|++|.++.|+...... +... .+.++.+|++|++++.++++ .+|.+ ++.. . .
T Consensus 17 v~~Ll~~g~~V~~l~R~~~~~~~----l~~~---~v~~v~~Dl~d~~~l~~al~-------g~d~Vi~~~~~~-~-~--- 77 (317)
T CHL00194 17 VRQALDEGYQVRCLVRNLRKASF----LKEW---GAELVYGDLSLPETLPPSFK-------GVTAIIDASTSR-P-S--- 77 (317)
T ss_pred HHHHHHCCCeEEEEEcChHHhhh----Hhhc---CCEEEECCCCCHHHHHHHHC-------CCCEEEECCCCC-C-C---
Confidence 56788899999999998654322 2211 47889999999988766553 46877 2221 1 1
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~ 122 (147)
+.....++|+.+..++.+++.. .+-.++|++||..
T Consensus 78 -----~~~~~~~~~~~~~~~l~~aa~~----~gvkr~I~~Ss~~ 112 (317)
T CHL00194 78 -----DLYNAKQIDWDGKLALIEAAKA----AKIKRFIFFSILN 112 (317)
T ss_pred -----CccchhhhhHHHHHHHHHHHHH----cCCCEEEEecccc
Confidence 1123456788888777777653 3335799999854
No 257
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=97.27 E-value=0.0011 Score=46.60 Aligned_cols=95 Identities=22% Similarity=0.268 Sum_probs=61.8
Q ss_pred EEEeecChhhHHHHHHHHHhcCCCceEEE---EecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHHH
Q 040927 12 GEATTKDEKRGLAAVEKLKNSGCDNVIFH---LLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELA 85 (147)
Q Consensus 12 v~l~~r~~~~~~~~~~~l~~~~~~~~~~~---~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~~ 85 (147)
|++++.+..-...+.+.+.+.|. ++..+ .+|+.+++++.++++.. .+|++ +|.... .. .....
T Consensus 2 ilv~G~tG~iG~~l~~~l~~~g~-~v~~~~r~~~d~~~~~~~~~~~~~~-----~~d~vi~~a~~~~~-~~----~~~~~ 70 (287)
T TIGR01214 2 ILITGANGQLGRELVQQLSPEGR-VVVALTSSQLDLTDPEALERLLRAI-----RPDAVVNTAAYTDV-DG----AESDP 70 (287)
T ss_pred EEEEcCCCHHHHHHHHHHHhcCC-EEEEeCCcccCCCCHHHHHHHHHhC-----CCCEEEECCccccc-cc----cccCH
Confidence 56666666666677777766553 33322 36999998888776552 57888 554321 11 11234
Q ss_pred HHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927 86 EKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122 (147)
Q Consensus 86 ~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~ 122 (147)
+..+++|+.++..+.+++... + .++|++||..
T Consensus 71 ~~~~~~n~~~~~~l~~~~~~~----~-~~~v~~Ss~~ 102 (287)
T TIGR01214 71 EKAFAVNALAPQNLARAAARH----G-ARLVHISTDY 102 (287)
T ss_pred HHHHHHHHHHHHHHHHHHHHc----C-CeEEEEeeee
Confidence 567889999999999987542 2 4799999864
No 258
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=97.18 E-value=0.0041 Score=44.05 Aligned_cols=98 Identities=24% Similarity=0.221 Sum_probs=64.8
Q ss_pred EEEEeecChhhHHHHHHHHHhcCCCceEEE---EecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHH
Q 040927 11 MGEATTKDEKRGLAAVEKLKNSGCDNVIFH---LLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYEL 84 (147)
Q Consensus 11 ~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~---~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~ 84 (147)
+|.+++.+..-+..+...+...+- .+... .+|++|.+++.++++.. .+|++ ||.... .. -..+
T Consensus 2 riLI~GasG~lG~~l~~~l~~~~~-~v~~~~r~~~dl~d~~~~~~~~~~~-----~pd~Vin~aa~~~~-~~----ce~~ 70 (286)
T PF04321_consen 2 RILITGASGFLGSALARALKERGY-EVIATSRSDLDLTDPEAVAKLLEAF-----KPDVVINCAAYTNV-DA----CEKN 70 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHTTTSE-EEEEESTTCS-TTSHHHHHHHHHHH-------SEEEE------H-HH----HHHS
T ss_pred EEEEECCCCHHHHHHHHHHhhCCC-EEEEeCchhcCCCCHHHHHHHHHHh-----CCCeEeccceeecH-Hh----hhhC
Confidence 688888888888888888876542 24444 67999999998888765 57877 555422 21 1223
Q ss_pred HHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927 85 AEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124 (147)
Q Consensus 85 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~ 124 (147)
-+..+.+|+.++..+.+.+... +.++|++||..-.
T Consensus 71 p~~a~~iN~~~~~~la~~~~~~-----~~~li~~STd~VF 105 (286)
T PF04321_consen 71 PEEAYAINVDATKNLAEACKER-----GARLIHISTDYVF 105 (286)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHC-----T-EEEEEEEGGGS
T ss_pred hhhhHHHhhHHHHHHHHHHHHc-----CCcEEEeeccEEE
Confidence 4568899999999999998653 3689999996543
No 259
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=97.14 E-value=0.0072 Score=43.68 Aligned_cols=107 Identities=10% Similarity=-0.004 Sum_probs=64.2
Q ss_pred ccccccCC--cEEEEeecChhh---HHHHHHHHHhcCC-------CceEEEEecCCCHH---HHHHHHHHHHhhcCCccE
Q 040927 2 KRSNQVHY--SMGEATTKDEKR---GLAAVEKLKNSGC-------DNVIFHLLDVTDPA---SVDSLVHFVSSQFGKLDI 66 (147)
Q Consensus 2 ~~~l~~~G--~~v~l~~r~~~~---~~~~~~~l~~~~~-------~~~~~~~~D~~~~~---~~~~~~~~~~~~~g~id~ 66 (147)
++.|.++| ++|+++.|+... .+++.+.+..... .++.++.+|++++. +... ...+. ..+|.
T Consensus 16 ~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~~-~~~~~---~~~d~ 91 (367)
T TIGR01746 16 LEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDAE-WERLA---ENVDT 91 (367)
T ss_pred HHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHHH-HHHHH---hhCCE
Confidence 46677888 779999997642 2233333322110 25888999998753 1111 12222 46788
Q ss_pred E---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927 67 L---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124 (147)
Q Consensus 67 l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~ 124 (147)
+ ++..... ..++...++|+.++..+++.+... +..+++++||....
T Consensus 92 vih~a~~~~~~--------~~~~~~~~~nv~g~~~ll~~a~~~----~~~~~v~iSS~~v~ 140 (367)
T TIGR01746 92 IVHNGALVNWV--------YPYSELRAANVLGTREVLRLAASG----RAKPLHYVSTISVL 140 (367)
T ss_pred EEeCCcEeccC--------CcHHHHhhhhhHHHHHHHHHHhhC----CCceEEEEcccccc
Confidence 8 4433111 123556789999999998887653 23459999997654
No 260
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=97.14 E-value=0.0022 Score=45.53 Aligned_cols=98 Identities=17% Similarity=0.093 Sum_probs=61.4
Q ss_pred ccccccCCc-EEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 2 KRSNQVHYS-MGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 2 ~~~l~~~G~-~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
++.|.++|+ .|++++|.... .. ..++ . ...+..|+.+.+.++.+.+. .++.+|++ |+....
T Consensus 15 ~~~L~~~g~~~v~~~~~~~~~-~~-~~~~---~---~~~~~~d~~~~~~~~~~~~~---~~~~~D~vvh~A~~~~~---- 79 (314)
T TIGR02197 15 VKALNERGITDILVVDNLRDG-HK-FLNL---A---DLVIADYIDKEDFLDRLEKG---AFGKIEAIFHQGACSDT---- 79 (314)
T ss_pred HHHHHHcCCceEEEEecCCCc-hh-hhhh---h---heeeeccCcchhHHHHHHhh---ccCCCCEEEECccccCc----
Confidence 567888897 68887765432 11 1111 1 13456788877666554432 34679988 554311
Q ss_pred hcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927 78 LTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~ 122 (147)
+.++....+++|+.++..+++.+... + .++|++||..
T Consensus 80 ---~~~~~~~~~~~n~~~~~~ll~~~~~~----~-~~~v~~SS~~ 116 (314)
T TIGR02197 80 ---TETDGEYMMENNYQYSKRLLDWCAEK----G-IPFIYASSAA 116 (314)
T ss_pred ---cccchHHHHHHHHHHHHHHHHHHHHh----C-CcEEEEccHH
Confidence 12345678899999999999987653 2 4699999964
No 261
>PRK05865 hypothetical protein; Provisional
Probab=97.13 E-value=0.002 Score=51.95 Aligned_cols=86 Identities=16% Similarity=0.126 Sum_probs=59.8
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|.++|++|++++|+.... + .. ++.++.+|++|.+++.++++ .+|++ |+....
T Consensus 17 a~~Ll~~G~~Vv~l~R~~~~~------~---~~-~v~~v~gDL~D~~~l~~al~-------~vD~VVHlAa~~~~----- 74 (854)
T PRK05865 17 TARLLSQGHEVVGIARHRPDS------W---PS-SADFIAADIRDATAVESAMT-------GADVVAHCAWVRGR----- 74 (854)
T ss_pred HHHHHHCcCEEEEEECCchhh------c---cc-CceEEEeeCCCHHHHHHHHh-------CCCEEEECCCcccc-----
Confidence 567788999999999874321 1 11 47788999999988877664 36877 543211
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~ 122 (147)
.+++|+.++.++++++. +.+.+++|++||..
T Consensus 75 ---------~~~vNv~GT~nLLeAa~----~~gvkr~V~iSS~~ 105 (854)
T PRK05865 75 ---------NDHINIDGTANVLKAMA----ETGTGRIVFTSSGH 105 (854)
T ss_pred ---------hHHHHHHHHHHHHHHHH----HcCCCeEEEECCcH
Confidence 35789999887776654 34446899999863
No 262
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=97.02 E-value=0.0027 Score=46.03 Aligned_cols=98 Identities=13% Similarity=0.083 Sum_probs=60.3
Q ss_pred ccccccC-CcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCC-CHHHHHHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927 2 KRSNQVH-YSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVT-DPASVDSLVHFVSSQFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 2 ~~~l~~~-G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~ 76 (147)
++.|.+. |++|+.++|+..... .+... ..+.++.+|++ +.+.+.+++ ..+|++ |+...+ ..
T Consensus 18 ~~~L~~~~~~~V~~~~r~~~~~~----~~~~~--~~~~~~~~Dl~~~~~~~~~~~-------~~~d~ViH~aa~~~~-~~ 83 (347)
T PRK11908 18 SKRILETTDWEVYGMDMQTDRLG----DLVNH--PRMHFFEGDITINKEWIEYHV-------KKCDVILPLVAIATP-AT 83 (347)
T ss_pred HHHHHhCCCCeEEEEeCcHHHHH----HhccC--CCeEEEeCCCCCCHHHHHHHH-------cCCCEEEECcccCCh-HH
Confidence 4556554 799999998754322 22111 24888899998 555544433 247887 443322 11
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~ 122 (147)
. .++-+..+++|+.+...+++++... + .++|++||..
T Consensus 84 ~----~~~p~~~~~~n~~~~~~ll~aa~~~----~-~~~v~~SS~~ 120 (347)
T PRK11908 84 Y----VKQPLRVFELDFEANLPIVRSAVKY----G-KHLVFPSTSE 120 (347)
T ss_pred h----hcCcHHHHHHHHHHHHHHHHHHHhc----C-CeEEEEecce
Confidence 1 1122456789999999988887642 3 4799999964
No 263
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=96.91 E-value=0.0088 Score=47.30 Aligned_cols=105 Identities=13% Similarity=0.046 Sum_probs=63.0
Q ss_pred ccccccC--CcEEEEeecCh--hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcc
Q 040927 2 KRSNQVH--YSMGEATTKDE--KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNW 74 (147)
Q Consensus 2 ~~~l~~~--G~~v~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~ 74 (147)
++.|.++ |++|+.+++.. .....+.. .....++.++.+|++|.+.+..++.. ..+|++ |+.....
T Consensus 23 v~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~---~~~~~~v~~~~~Dl~d~~~~~~~~~~-----~~~D~ViHlAa~~~~~ 94 (668)
T PLN02260 23 ANRLIRNYPDYKIVVLDKLDYCSNLKNLNP---SKSSPNFKFVKGDIASADLVNYLLIT-----EGIDTIMHFAAQTHVD 94 (668)
T ss_pred HHHHHHhCCCCEEEEEeCCCccchhhhhhh---cccCCCeEEEECCCCChHHHHHHHhh-----cCCCEEEECCCccCch
Confidence 3456555 67888887742 22221111 11112588899999998876655422 368888 5544221
Q ss_pred hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927 75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122 (147)
Q Consensus 75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~ 122 (147)
. +..+....+++|+.++..+++++... ....++|++||..
T Consensus 95 ~-----~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~vkr~I~~SS~~ 134 (668)
T PLN02260 95 N-----SFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDE 134 (668)
T ss_pred h-----hhhCHHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEcchH
Confidence 1 11223466789999999998887542 1135799999964
No 264
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=96.90 E-value=0.018 Score=40.62 Aligned_cols=97 Identities=21% Similarity=0.173 Sum_probs=67.1
Q ss_pred EEEEeecChhhHHHHHHHHHhcCCCceEE---EEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHH
Q 040927 11 MGEATTKDEKRGLAAVEKLKNSGCDNVIF---HLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYEL 84 (147)
Q Consensus 11 ~v~l~~r~~~~~~~~~~~l~~~~~~~~~~---~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~ 84 (147)
+|.+++.+..-..++.+.+. +..++.. -.+|++|++.+.+++.+. ++|++ |+...... -..+
T Consensus 2 ~iLi~G~~GqLG~~L~~~l~--~~~~v~a~~~~~~Ditd~~~v~~~i~~~-----~PDvVIn~AAyt~vD~-----aE~~ 69 (281)
T COG1091 2 KILITGANGQLGTELRRALP--GEFEVIATDRAELDITDPDAVLEVIRET-----RPDVVINAAAYTAVDK-----AESE 69 (281)
T ss_pred cEEEEcCCChHHHHHHHHhC--CCceEEeccCccccccChHHHHHHHHhh-----CCCEEEECcccccccc-----ccCC
Confidence 37788888877777777765 2112222 236999999999988875 78998 55442211 1223
Q ss_pred HHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927 85 AEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124 (147)
Q Consensus 85 ~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~ 124 (147)
-+..+.+|..++.++.+++-.. +..+|++|+-.-.
T Consensus 70 ~e~A~~vNa~~~~~lA~aa~~~-----ga~lVhiSTDyVF 104 (281)
T COG1091 70 PELAFAVNATGAENLARAAAEV-----GARLVHISTDYVF 104 (281)
T ss_pred HHHHHHhHHHHHHHHHHHHHHh-----CCeEEEeecceEe
Confidence 4678999999999999998654 3679999985533
No 265
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=96.87 E-value=0.003 Score=44.77 Aligned_cols=99 Identities=20% Similarity=0.079 Sum_probs=61.5
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|.++|++|..++|......... . .+.++.+|+++.+......... . |.+ ++.......
T Consensus 17 ~~~L~~~g~~V~~~~r~~~~~~~~~-------~-~~~~~~~d~~~~~~~~~~~~~~----~--d~vih~aa~~~~~~~-- 80 (314)
T COG0451 17 VERLLAAGHDVRGLDRLRDGLDPLL-------S-GVEFVVLDLTDRDLVDELAKGV----P--DAVIHLAAQSSVPDS-- 80 (314)
T ss_pred HHHHHhCCCeEEEEeCCCccccccc-------c-ccceeeecccchHHHHHHHhcC----C--CEEEEccccCchhhh--
Confidence 4567777999999988765433221 1 4778889999884443333221 1 666 444322111
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~ 122 (147)
..+ .....+.+|+.++.++++++.. .+..++|+.||..
T Consensus 81 ~~~--~~~~~~~~nv~gt~~ll~aa~~----~~~~~~v~~ss~~ 118 (314)
T COG0451 81 NAS--DPAEFLDVNVDGTLNLLEAARA----AGVKRFVFASSVS 118 (314)
T ss_pred hhh--CHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeCCCc
Confidence 111 3456889999999999999876 3446788855544
No 266
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=96.82 E-value=0.0019 Score=45.92 Aligned_cols=99 Identities=15% Similarity=0.169 Sum_probs=58.0
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHh--hcCCccEE---ecCCCcch
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSS--QFGKLDIL---GGLPDNWY 75 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~g~id~l---ag~~~~~~ 75 (147)
|++.|.++|++++++.|+....... .....+|+.|..+.+.+++.+.+ .++.+|++ ||.... .
T Consensus 15 l~~~L~~~g~~~v~~~~~~~~~~~~-----------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~-~ 82 (308)
T PRK11150 15 IVKALNDKGITDILVVDNLKDGTKF-----------VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGACSST-T 82 (308)
T ss_pred HHHHHHhCCCceEEEecCCCcchHH-----------HhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECceecCC-c
Confidence 3567788898766665543321110 01123566666555555555432 34578988 554322 1
Q ss_pred hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927 76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122 (147)
Q Consensus 76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~ 122 (147)
..+. +..++.|+.++..+++++... + .++|++||..
T Consensus 83 ---~~~~---~~~~~~n~~~t~~ll~~~~~~----~-~~~i~~SS~~ 118 (308)
T PRK11150 83 ---EWDG---KYMMDNNYQYSKELLHYCLER----E-IPFLYASSAA 118 (308)
T ss_pred ---CCCh---HHHHHHHHHHHHHHHHHHHHc----C-CcEEEEcchH
Confidence 1122 346899999999999987542 3 3599999864
No 267
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=96.68 E-value=0.0052 Score=48.52 Aligned_cols=98 Identities=10% Similarity=0.003 Sum_probs=60.6
Q ss_pred ccccccC-CcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHH-HHHHHHHHhhcCCccEE---ecCCCcchh
Q 040927 2 KRSNQVH-YSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASV-DSLVHFVSSQFGKLDIL---GGLPDNWYK 76 (147)
Q Consensus 2 ~~~l~~~-G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~-~~~~~~~~~~~g~id~l---ag~~~~~~~ 76 (147)
++.|.++ |++|+.++|+...... +.. ..++.++.+|++|.++. ++++ ..+|++ |+.......
T Consensus 332 v~~Ll~~~g~~V~~l~r~~~~~~~----~~~--~~~~~~~~gDl~d~~~~l~~~l-------~~~D~ViHlAa~~~~~~~ 398 (660)
T PRK08125 332 TERLLRDDNYEVYGLDIGSDAISR----FLG--HPRFHFVEGDISIHSEWIEYHI-------KKCDVVLPLVAIATPIEY 398 (660)
T ss_pred HHHHHhCCCcEEEEEeCCchhhhh----hcC--CCceEEEeccccCcHHHHHHHh-------cCCCEEEECccccCchhh
Confidence 4556654 7889888886543221 111 12478888999986542 2222 257888 664422111
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~ 122 (147)
. +..+..+++|+.+...+++++... + .++|++||..
T Consensus 399 --~---~~~~~~~~~Nv~~t~~ll~a~~~~----~-~~~V~~SS~~ 434 (660)
T PRK08125 399 --T---RNPLRVFELDFEENLKIIRYCVKY----N-KRIIFPSTSE 434 (660)
T ss_pred --c---cCHHHHHHhhHHHHHHHHHHHHhc----C-CeEEEEcchh
Confidence 1 122456789999999999998653 2 4799999964
No 268
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=96.62 E-value=0.046 Score=38.88 Aligned_cols=95 Identities=17% Similarity=0.081 Sum_probs=60.8
Q ss_pred EEEEeecChhhHHHHHHHHHhcCCCceEE-------EEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcc
Q 040927 11 MGEATTKDEKRGLAAVEKLKNSGCDNVIF-------HLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQ 80 (147)
Q Consensus 11 ~v~l~~r~~~~~~~~~~~l~~~~~~~~~~-------~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~ 80 (147)
+|.+++.+..-...+.+.+.+.+ ++.. +..|++|.+.+.++++.. .+|++ |+......
T Consensus 2 ~iLVtG~~GfiGs~l~~~L~~~g--~V~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~D~Vih~Aa~~~~~~----- 69 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALAPLG--NLIALDVHSTDYCGDFSNPEGVAETVRKI-----RPDVIVNAAAHTAVDK----- 69 (299)
T ss_pred eEEEECCCCHHHHHHHHHhhccC--CEEEeccccccccCCCCCHHHHHHHHHhc-----CCCEEEECCccCCcch-----
Confidence 46777777666666767666554 2322 236999998887776542 57888 55442211
Q ss_pred cHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927 81 TYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122 (147)
Q Consensus 81 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~ 122 (147)
...+-+..+.+|+.++..+.+++... + .++|++||..
T Consensus 70 ~~~~~~~~~~~N~~~~~~l~~aa~~~----g-~~~v~~Ss~~ 106 (299)
T PRK09987 70 AESEPEFAQLLNATSVEAIAKAANEV----G-AWVVHYSTDY 106 (299)
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEccce
Confidence 11122456688999999999987653 2 4689998854
No 269
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=96.58 E-value=0.012 Score=40.68 Aligned_cols=102 Identities=11% Similarity=0.037 Sum_probs=51.8
Q ss_pred ccccCCc--EEEEeecChh---hHHHHHHHHHhcC---------CCceEEEEecCCCHH-HH-HHHHHHHHhhcCCccEE
Q 040927 4 SNQVHYS--MGEATTKDEK---RGLAAVEKLKNSG---------CDNVIFHLLDVTDPA-SV-DSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 4 ~l~~~G~--~v~l~~r~~~---~~~~~~~~l~~~~---------~~~~~~~~~D~~~~~-~~-~~~~~~~~~~~g~id~l 67 (147)
.|.+.+. +|+++.|..+ ..+++.+.+...+ ..++.++.+|++++. .+ ....+.+.+ .+|++
T Consensus 15 ~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~~~~L~~---~v~~I 91 (249)
T PF07993_consen 15 ELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDEDYQELAE---EVDVI 91 (249)
T ss_dssp HHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHHHHHHHH---H--EE
T ss_pred HHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHHhhcccc---cccee
Confidence 3444444 8999999753 2334433332211 347999999999864 11 111233322 46777
Q ss_pred ---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcC
Q 040927 68 ---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASS 120 (147)
Q Consensus 68 ---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS 120 (147)
|+......+ ++...++|+.|+..+++.+.. .+..+++++||
T Consensus 92 iH~Aa~v~~~~~--------~~~~~~~NV~gt~~ll~la~~----~~~~~~~~iST 135 (249)
T PF07993_consen 92 IHCAASVNFNAP--------YSELRAVNVDGTRNLLRLAAQ----GKRKRFHYIST 135 (249)
T ss_dssp EE--SS-SBS-S----------EEHHHHHHHHHHHHHHHTS----SS---EEEEEE
T ss_pred eecchhhhhccc--------chhhhhhHHHHHHHHHHHHHh----ccCcceEEecc
Confidence 444322222 234678999999999998762 22237999999
No 270
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=96.47 E-value=0.016 Score=42.55 Aligned_cols=99 Identities=15% Similarity=0.033 Sum_probs=55.8
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|.++|++|+.++|..... +..... ...++.+|++|.+.+..++. .+|++ |+.... ....
T Consensus 38 ~~~L~~~G~~V~~v~r~~~~~------~~~~~~-~~~~~~~Dl~d~~~~~~~~~-------~~D~Vih~Aa~~~~-~~~~ 102 (370)
T PLN02695 38 ARRLKAEGHYIIASDWKKNEH------MSEDMF-CHEFHLVDLRVMENCLKVTK-------GVDHVFNLAADMGG-MGFI 102 (370)
T ss_pred HHHHHhCCCEEEEEEeccccc------cccccc-cceEEECCCCCHHHHHHHHh-------CCCEEEEcccccCC-cccc
Confidence 455666677777776643210 000000 14567789998776655442 46877 543311 1111
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~ 122 (147)
.. +....+..|+.++.++++++... +..++|++||..
T Consensus 103 ~~---~~~~~~~~N~~~t~nll~aa~~~----~vk~~V~~SS~~ 139 (370)
T PLN02695 103 QS---NHSVIMYNNTMISFNMLEAARIN----GVKRFFYASSAC 139 (370)
T ss_pred cc---CchhhHHHHHHHHHHHHHHHHHh----CCCEEEEeCchh
Confidence 11 12345678999999998886532 335799999864
No 271
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=96.39 E-value=0.011 Score=41.74 Aligned_cols=69 Identities=16% Similarity=0.112 Sum_probs=44.5
Q ss_pred EecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEE
Q 040927 41 LLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVN 117 (147)
Q Consensus 41 ~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~ 117 (147)
.+|++|.+++.++++. ..+|++ |+....... ..++....+++|+.++..+++.+... +.+++|+
T Consensus 32 ~~Dl~~~~~l~~~~~~-----~~~d~Vih~A~~~~~~~~----~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~i~ 98 (306)
T PLN02725 32 ELDLTRQADVEAFFAK-----EKPTYVILAAAKVGGIHA----NMTYPADFIRENLQIQTNVIDAAYRH----GVKKLLF 98 (306)
T ss_pred cCCCCCHHHHHHHHhc-----cCCCEEEEeeeeecccch----hhhCcHHHHHHHhHHHHHHHHHHHHc----CCCeEEE
Confidence 4799998888777655 256877 554311010 01122356788999999998887643 3357999
Q ss_pred EcCCC
Q 040927 118 ASSSM 122 (147)
Q Consensus 118 isS~~ 122 (147)
+||..
T Consensus 99 ~SS~~ 103 (306)
T PLN02725 99 LGSSC 103 (306)
T ss_pred eCcee
Confidence 99864
No 272
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=96.35 E-value=0.028 Score=39.96 Aligned_cols=72 Identities=22% Similarity=0.152 Sum_probs=52.9
Q ss_pred ceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCC
Q 040927 36 NVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDS 112 (147)
Q Consensus 36 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~ 112 (147)
+..++..|++|.+.+.+++.+- .+|.+ |+-+.- +.+..+-+..+++|+.|++.|++++..+...
T Consensus 52 ~~~fv~~DI~D~~~v~~~~~~~-----~~D~VvhfAAESHV-----DRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~--- 118 (340)
T COG1088 52 RYRFVQGDICDRELVDRLFKEY-----QPDAVVHFAAESHV-----DRSIDGPAPFIQTNVVGTYTLLEAARKYWGK--- 118 (340)
T ss_pred CceEEeccccCHHHHHHHHHhc-----CCCeEEEechhccc-----cccccChhhhhhcchHHHHHHHHHHHHhccc---
Confidence 6899999999999888887653 67877 543322 2233334567899999999999999888643
Q ss_pred CeEEEEcC
Q 040927 113 PRIVNASS 120 (147)
Q Consensus 113 ~~iv~isS 120 (147)
-+++.||.
T Consensus 119 frf~HIST 126 (340)
T COG1088 119 FRFHHIST 126 (340)
T ss_pred ceEEEecc
Confidence 25788876
No 273
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=96.28 E-value=0.099 Score=41.50 Aligned_cols=100 Identities=11% Similarity=-0.023 Sum_probs=67.9
Q ss_pred CcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHHH
Q 040927 9 YSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELA 85 (147)
Q Consensus 9 G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~~ 85 (147)
..+|++++.+..-...+.+.+...+- .+.+...|++|.+.+...+... .+|++ |+...... . +...++-
T Consensus 380 ~mkiLVtGa~G~iG~~l~~~L~~~g~-~v~~~~~~l~d~~~v~~~i~~~-----~pd~Vih~Aa~~~~~~-~-~~~~~~~ 451 (668)
T PLN02260 380 SLKFLIYGRTGWIGGLLGKLCEKQGI-AYEYGKGRLEDRSSLLADIRNV-----KPTHVFNAAGVTGRPN-V-DWCESHK 451 (668)
T ss_pred CceEEEECCCchHHHHHHHHHHhCCC-eEEeeccccccHHHHHHHHHhh-----CCCEEEECCcccCCCC-C-ChHHhCH
Confidence 45689999998888888888877664 4545667899988887766543 57888 55432111 1 1122344
Q ss_pred HHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCC
Q 040927 86 EKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSS 121 (147)
Q Consensus 86 ~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~ 121 (147)
...+++|+.++..+++++... + .+++++||.
T Consensus 452 ~~~~~~N~~gt~~l~~a~~~~----g-~~~v~~Ss~ 482 (668)
T PLN02260 452 VETIRANVVGTLTLADVCREN----G-LLMMNFATG 482 (668)
T ss_pred HHHHHHHhHHHHHHHHHHHHc----C-CeEEEEccc
Confidence 678899999999999998753 2 346666653
No 274
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=96.21 E-value=0.012 Score=40.37 Aligned_cols=82 Identities=13% Similarity=0.090 Sum_probs=49.7
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKM 77 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~ 77 (147)
+++.|.++|++|++++|+... ......++.++.++ +...+.+.+.+.++.+|++ ||... ..+.
T Consensus 32 LA~~L~~~G~~V~li~r~~~~--------~~~~~~~v~~i~v~-----s~~~m~~~l~~~~~~~DivIh~AAvsd-~~~~ 97 (229)
T PRK06732 32 IAETFLAAGHEVTLVTTKTAV--------KPEPHPNLSIIEIE-----NVDDLLETLEPLVKDHDVLIHSMAVSD-YTPV 97 (229)
T ss_pred HHHHHHhCCCEEEEEECcccc--------cCCCCCCeEEEEEe-----cHHHHHHHHHHHhcCCCEEEeCCccCC-ceeh
Confidence 356788899999999876421 11011135555543 2233333344445678988 77663 3556
Q ss_pred hcccHHHHHHhHHHhhhhH
Q 040927 78 LTQTYELAEKCIQTNYYGN 96 (147)
Q Consensus 78 ~~~~~~~~~~~~~~n~~~~ 96 (147)
...+.++|..++++|.+..
T Consensus 98 ~~~~~~~~~~~~~v~~~~~ 116 (229)
T PRK06732 98 YMTDLEEVSASDNLNEFLT 116 (229)
T ss_pred hhhhhhhhhhhhhhhhhhc
Confidence 6677889999988877543
No 275
>PLN02778 3,5-epimerase/4-reductase
Probab=96.19 E-value=0.17 Score=36.13 Aligned_cols=90 Identities=11% Similarity=-0.021 Sum_probs=61.8
Q ss_pred CcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHHH
Q 040927 9 YSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELA 85 (147)
Q Consensus 9 G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~~ 85 (147)
..+|++++.+.--...+...|...|. ++.....|+.|.+.+...++. ..+|++ ||...... . +...++-
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~-~V~~~~~~~~~~~~v~~~l~~-----~~~D~ViH~Aa~~~~~~-~-~~~~~~p 80 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGI-DFHYGSGRLENRASLEADIDA-----VKPTHVFNAAGVTGRPN-V-DWCESHK 80 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCC-EEEEecCccCCHHHHHHHHHh-----cCCCEEEECCcccCCCC-c-hhhhhCH
Confidence 45799999998888888888888775 566566788887776655543 257888 65442211 0 1111234
Q ss_pred HHhHHHhhhhHHHHHHHHHHh
Q 040927 86 EKCIQTNYYGNKRMCEALIPL 106 (147)
Q Consensus 86 ~~~~~~n~~~~~~l~~~~~~~ 106 (147)
...+++|+.++..+++++...
T Consensus 81 ~~~~~~Nv~gt~~ll~aa~~~ 101 (298)
T PLN02778 81 VETIRANVVGTLTLADVCRER 101 (298)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 568899999999999998653
No 276
>PRK07201 short chain dehydrogenase; Provisional
Probab=96.17 E-value=0.041 Score=43.37 Aligned_cols=105 Identities=14% Similarity=0.064 Sum_probs=62.0
Q ss_pred ccccc--cCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHH--HHHHHHHHhhcCCccEE---ecCCCcc
Q 040927 2 KRSNQ--VHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASV--DSLVHFVSSQFGKLDIL---GGLPDNW 74 (147)
Q Consensus 2 ~~~l~--~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~--~~~~~~~~~~~g~id~l---ag~~~~~ 74 (147)
++.|. ..|++|++++|+... ..........+..++.++.+|++|++.. ...++.+ ..+|++ ||....
T Consensus 17 v~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----~~~D~Vih~Aa~~~~- 90 (657)
T PRK07201 17 VSRLLDRRREATVHVLVRRQSL-SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----GDIDHVVHLAAIYDL- 90 (657)
T ss_pred HHHHHhcCCCCEEEEEECcchH-HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----cCCCEEEECceeecC-
Confidence 34555 579999999996432 2222212222213588899999985321 1122222 367888 554321
Q ss_pred hhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927 75 YKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123 (147)
Q Consensus 75 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~ 123 (147)
. .+ .....++|+.++..+++++.. .+..++|++||...
T Consensus 91 ~----~~---~~~~~~~nv~gt~~ll~~a~~----~~~~~~v~~SS~~v 128 (657)
T PRK07201 91 T----AD---EEAQRAANVDGTRNVVELAER----LQAATFHHVSSIAV 128 (657)
T ss_pred C----CC---HHHHHHHHhHHHHHHHHHHHh----cCCCeEEEEecccc
Confidence 1 11 234568899999888888654 23467999998654
No 277
>PLN02206 UDP-glucuronate decarboxylase
Probab=96.11 E-value=0.03 Score=42.27 Aligned_cols=33 Identities=27% Similarity=0.206 Sum_probs=26.0
Q ss_pred HHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927 86 EKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123 (147)
Q Consensus 86 ~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~ 123 (147)
...+++|+.++..+++++... + .++|++||...
T Consensus 204 ~~~~~~Nv~gt~nLleaa~~~----g-~r~V~~SS~~V 236 (442)
T PLN02206 204 VKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSEV 236 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHh----C-CEEEEECChHH
Confidence 567899999999999987643 2 37999999653
No 278
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=95.80 E-value=0.046 Score=41.19 Aligned_cols=32 Identities=28% Similarity=0.256 Sum_probs=25.4
Q ss_pred HHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927 86 EKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122 (147)
Q Consensus 86 ~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~ 122 (147)
...+++|+.++..++.++... + .++|++||..
T Consensus 205 ~~~~~~Nv~gT~nLleaa~~~----g-~r~V~~SS~~ 236 (436)
T PLN02166 205 VKTIKTNVMGTLNMLGLAKRV----G-ARFLLTSTSE 236 (436)
T ss_pred HHHHHHHHHHHHHHHHHHHHh----C-CEEEEECcHH
Confidence 567889999999999887653 2 3799998864
No 279
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=95.34 E-value=0.036 Score=46.49 Aligned_cols=125 Identities=13% Similarity=0.036 Sum_probs=86.2
Q ss_pred CccccccCCcE-EEEeecChhh---HHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCc
Q 040927 1 MKRSNQVHYSM-GEATTKDEKR---GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDN 73 (147)
Q Consensus 1 ~~~~l~~~G~~-v~l~~r~~~~---~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~ 73 (147)
|+.+|-.+|++ +++++|+.-+ ....+...+.+|. .+.+-.-|++..+....++++.. +.+++-++ |... .
T Consensus 1784 LaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GV-qV~vsT~nitt~~ga~~Li~~s~-kl~~vGGiFnLA~VL-R 1860 (2376)
T KOG1202|consen 1784 LAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGV-QVQVSTSNITTAEGARGLIEESN-KLGPVGGIFNLAAVL-R 1860 (2376)
T ss_pred HHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCe-EEEEecccchhhhhHHHHHHHhh-hcccccchhhHHHHH-H
Confidence 35677889998 8888887422 3344555666664 46666668888888888887754 44677666 5555 4
Q ss_pred chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc
Q 040927 74 WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN 130 (147)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~ 130 (147)
.+.+.+++++.+++.-...+.++.++-+.....--.- ..+|.+||+..-.|..++
T Consensus 1861 D~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~L--dyFv~FSSvscGRGN~GQ 1915 (2376)
T KOG1202|consen 1861 DGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPEL--DYFVVFSSVSCGRGNAGQ 1915 (2376)
T ss_pred hhhhcccChhHHHhhhccceeeeeehhhhhhhhCccc--ceEEEEEeecccCCCCcc
Confidence 4778889999999999999999998776654332211 468888887765555443
No 280
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=95.17 E-value=0.15 Score=33.40 Aligned_cols=67 Identities=12% Similarity=-0.007 Sum_probs=50.2
Q ss_pred ccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecC--CCHHHHHHHHHHHHhhcCCccEE-ecCCCc
Q 040927 4 SNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDV--TDPASVDSLVHFVSSQFGKLDIL-GGLPDN 73 (147)
Q Consensus 4 ~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~--~~~~~~~~~~~~~~~~~g~id~l-ag~~~~ 73 (147)
...++|.+|++++.+++.++++.+.++..++ .+.++...- -++++.+.+++.+.+. .+|++ .|...+
T Consensus 43 ~~~~~~~~ifllG~~~~~~~~~~~~l~~~yP-~l~ivg~~~g~f~~~~~~~i~~~I~~~--~pdiv~vglG~P 112 (172)
T PF03808_consen 43 RAEQRGKRIFLLGGSEEVLEKAAANLRRRYP-GLRIVGYHHGYFDEEEEEAIINRINAS--GPDIVFVGLGAP 112 (172)
T ss_pred HHHHcCCeEEEEeCCHHHHHHHHHHHHHHCC-CeEEEEecCCCCChhhHHHHHHHHHHc--CCCEEEEECCCC
Confidence 3456789999999999999999999988765 355443321 2677888888888775 78999 777644
No 281
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=95.15 E-value=0.072 Score=38.87 Aligned_cols=52 Identities=15% Similarity=0.159 Sum_probs=42.8
Q ss_pred ccCCcEEEEeecChhhHHHHHHHHHhcCCC---ceEEEEecCCCHHHHHHHHHHH
Q 040927 6 QVHYSMGEATTKDEKRGLAAVEKLKNSGCD---NVIFHLLDVTDPASVDSLVHFV 57 (147)
Q Consensus 6 ~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~---~~~~~~~D~~~~~~~~~~~~~~ 57 (147)
...|..+.+.+||.+++++..+.+.+..+. ...++.||.+|+++++++..+.
T Consensus 30 ~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~ 84 (423)
T KOG2733|consen 30 VFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQA 84 (423)
T ss_pred cccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhh
Confidence 347888999999999999999998876532 2348889999999999998775
No 282
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=95.07 E-value=0.065 Score=37.69 Aligned_cols=55 Identities=11% Similarity=-0.033 Sum_probs=38.7
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCC-ccEE
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGK-LDIL 67 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~-id~l 67 (147)
++.|.+.|++|.+..|+.+... .. .+..+.+|+.|++++..+++.. +.+.. +|.+
T Consensus 16 v~~L~~~g~~V~~~~R~~~~~~--------~~--~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d~v 71 (285)
T TIGR03649 16 ARLLQAASVPFLVASRSSSSSA--------GP--NEKHVKFDWLDEDTWDNPFSSD-DGMEPEISAV 71 (285)
T ss_pred HHHHHhCCCcEEEEeCCCcccc--------CC--CCccccccCCCHHHHHHHHhcc-cCcCCceeEE
Confidence 4667888999999999876431 11 3566778999999998887653 22234 6766
No 283
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=94.57 E-value=0.079 Score=35.26 Aligned_cols=57 Identities=12% Similarity=0.032 Sum_probs=40.6
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
++.|++.|++|++++|+.++++++.+++....+ .....+|..+.+++.+.++ ..|++
T Consensus 45 a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~~~~~~~-------~~diV 101 (194)
T cd01078 45 AVLLAREGARVVLVGRDLERAQKAADSLRARFG--EGVGAVETSDDAARAAAIK-------GADVV 101 (194)
T ss_pred HHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcC--CcEEEeeCCCHHHHHHHHh-------cCCEE
Confidence 456778899999999999888888777754332 3455678888777655542 45777
No 284
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=94.53 E-value=0.091 Score=37.38 Aligned_cols=104 Identities=13% Similarity=0.111 Sum_probs=64.0
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEEecCCCcchhhhccc
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDILGGLPDNWYKMLTQT 81 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lag~~~~~~~~~~~~ 81 (147)
+..|++.|-+|++-+|..+---.-.+-+...| .+.++..|+.|+++++++++.-. --|+. .|...+...+ +
T Consensus 78 vnklak~GSQviiPyR~d~~~~r~lkvmGdLG--Qvl~~~fd~~DedSIr~vvk~sN---VVINL-IGrd~eTknf---~ 148 (391)
T KOG2865|consen 78 VNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLG--QVLFMKFDLRDEDSIRAVVKHSN---VVINL-IGRDYETKNF---S 148 (391)
T ss_pred HHHHhhcCCeEEEeccCCccchhheeeccccc--ceeeeccCCCCHHHHHHHHHhCc---EEEEe-eccccccCCc---c
Confidence 45688999999999997543222223333344 48999999999999998875521 11111 4543222222 2
Q ss_pred HHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927 82 YELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124 (147)
Q Consensus 82 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~ 124 (147)
. -++|+.++-.+.+.+-.. +--++|.+|+..+.
T Consensus 149 f------~Dvn~~~aerlAricke~----GVerfIhvS~Lgan 181 (391)
T KOG2865|consen 149 F------EDVNVHIAERLARICKEA----GVERFIHVSCLGAN 181 (391)
T ss_pred c------ccccchHHHHHHHHHHhh----Chhheeehhhcccc
Confidence 2 256787877777776443 22358888886644
No 285
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=94.37 E-value=0.52 Score=34.73 Aligned_cols=74 Identities=18% Similarity=0.159 Sum_probs=44.9
Q ss_pred ceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCC
Q 040927 36 NVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDS 112 (147)
Q Consensus 36 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~ 112 (147)
++.++.+|+.|..++.+.++. .-++ |+...... ..+-+..+++|+.|+.++...+... +.
T Consensus 56 ~v~~~~~D~~~~~~i~~a~~~-------~~Vvh~aa~~~~~~~------~~~~~~~~~vNV~gT~nvi~~c~~~----~v 118 (361)
T KOG1430|consen 56 RVTVILGDLLDANSISNAFQG-------AVVVHCAASPVPDFV------ENDRDLAMRVNVNGTLNVIEACKEL----GV 118 (361)
T ss_pred ceeEEecchhhhhhhhhhccC-------ceEEEeccccCcccc------ccchhhheeecchhHHHHHHHHHHh----CC
Confidence 456666777766666554432 2233 32221111 1145678899999988888887654 45
Q ss_pred CeEEEEcCCCCCCc
Q 040927 113 PRIVNASSSMGKLK 126 (147)
Q Consensus 113 ~~iv~isS~~~~~~ 126 (147)
.++|++||..-..+
T Consensus 119 ~~lIYtSs~~Vvf~ 132 (361)
T KOG1430|consen 119 KRLIYTSSAYVVFG 132 (361)
T ss_pred CEEEEecCceEEeC
Confidence 67999999765443
No 286
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=93.59 E-value=0.086 Score=37.51 Aligned_cols=58 Identities=17% Similarity=0.200 Sum_probs=39.8
Q ss_pred ccccccCCcE-EEEeecCh---hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 2 KRSNQVHYSM-GEATTKDE---KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 2 ~~~l~~~G~~-v~l~~r~~---~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
+..|+..|++ |++++|+. ++++++.+++...+. .+....+|+++.+++...+. ..|++
T Consensus 142 a~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~-~~~~~~~d~~~~~~~~~~~~-------~~Dil 203 (289)
T PRK12548 142 QVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVP-ECIVNVYDLNDTEKLKAEIA-------SSDIL 203 (289)
T ss_pred HHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCC-CceeEEechhhhhHHHhhhc-------cCCEE
Confidence 3456788987 99999986 677777777765543 35566788877666644332 34877
No 287
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=93.17 E-value=0.066 Score=37.98 Aligned_cols=106 Identities=16% Similarity=0.119 Sum_probs=65.3
Q ss_pred CccccccCCcEEEEeecChh--hHHHHHHHHHh---cCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCC
Q 040927 1 MKRSNQVHYSMGEATTKDEK--RGLAAVEKLKN---SGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPD 72 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~--~~~~~~~~l~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~ 72 (147)
|+..|.++|+.|.-+.|... ....+ .|.. ....++..+.+|++|...+.++++++ .+|-+ ++-+.
T Consensus 18 La~lLLekGY~VhGi~Rrss~~n~~ri--~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v-----~PdEIYNLaAQS~ 90 (345)
T COG1089 18 LAELLLEKGYEVHGIKRRSSSFNTPRI--HLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV-----QPDEIYNLAAQSH 90 (345)
T ss_pred HHHHHHhcCcEEEEEeeccccCCcccc--eeccccccCCceeEEEeccccchHHHHHHHHhc-----Cchhheecccccc
Confidence 45678899999999887632 22221 2222 12225889999999999998888776 45555 33221
Q ss_pred cchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcC
Q 040927 73 NWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASS 120 (147)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS 120 (147)
- ..+.++-..+.+++..|+..++.+.--.- .++.++..-||
T Consensus 91 V-----~vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~~~~rfYQASt 131 (345)
T COG1089 91 V-----GVSFEQPEYTADVDAIGTLRLLEAIRILG--EKKTRFYQAST 131 (345)
T ss_pred c-----cccccCcceeeeechhHHHHHHHHHHHhC--CcccEEEeccc
Confidence 1 22333335677888999999888864332 22345555555
No 288
>PRK12320 hypothetical protein; Provisional
Probab=93.10 E-value=0.58 Score=37.56 Aligned_cols=86 Identities=13% Similarity=0.115 Sum_probs=54.8
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|.++|++|++++|.... . .. ..+.++.+|++|+. +.+++ ..+|.+ ++.. ...
T Consensus 17 a~~Ll~~G~~Vi~ldr~~~~-------~--~~-~~ve~v~~Dl~d~~-l~~al-------~~~D~VIHLAa~~-~~~--- 74 (699)
T PRK12320 17 TRQLIAAGHTVSGIAQHPHD-------A--LD-PRVDYVCASLRNPV-LQELA-------GEADAVIHLAPVD-TSA--- 74 (699)
T ss_pred HHHHHhCCCEEEEEeCChhh-------c--cc-CCceEEEccCCCHH-HHHHh-------cCCCEEEEcCccC-ccc---
Confidence 45677889999999886431 1 11 24788899999873 32222 357887 5432 100
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~ 123 (147)
..++|+.++.++++++.. .+ .++|++||..|
T Consensus 75 ---------~~~vNv~Gt~nLleAA~~----~G-vRiV~~SS~~G 105 (699)
T PRK12320 75 ---------PGGVGITGLAHVANAAAR----AG-ARLLFVSQAAG 105 (699)
T ss_pred ---------hhhHHHHHHHHHHHHHHH----cC-CeEEEEECCCC
Confidence 114789999888888743 23 36999998653
No 289
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=92.91 E-value=0.79 Score=30.26 Aligned_cols=66 Identities=9% Similarity=-0.099 Sum_probs=46.1
Q ss_pred cccCCcEEEEeecChhhHHHHHHHHHhcCCC-ceEEEEecCCCHHHHHHHHHHHHhhcCCccEE-ecCCCc
Q 040927 5 NQVHYSMGEATTKDEKRGLAAVEKLKNSGCD-NVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL-GGLPDN 73 (147)
Q Consensus 5 l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l-ag~~~~ 73 (147)
..++|++|++++.+++.++++.+.+++..+. ++.....-+ ++++-+.+++++.+. .+|++ .|...+
T Consensus 44 ~~~~~~~vfllG~~~~v~~~~~~~l~~~yP~l~i~g~~g~f-~~~~~~~i~~~I~~s--~~dil~VglG~P 111 (177)
T TIGR00696 44 AGKEKLPIFLYGGKPDVLQQLKVKLIKEYPKLKIVGAFGPL-EPEERKAALAKIARS--GAGIVFVGLGCP 111 (177)
T ss_pred HHHcCCeEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCC-ChHHHHHHHHHHHHc--CCCEEEEEcCCc
Confidence 4567899999999999999999999877542 223332233 455566777888764 68988 776534
No 290
>COG1922 WecG Teichoic acid biosynthesis proteins [Cell envelope biogenesis, outer membrane]
Probab=92.51 E-value=0.93 Score=31.70 Aligned_cols=65 Identities=12% Similarity=-0.052 Sum_probs=47.4
Q ss_pred cccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEE---ecCCCHHHHHHHHHHHHhhcCCccEE-ecCCCc
Q 040927 5 NQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHL---LDVTDPASVDSLVHFVSSQFGKLDIL-GGLPDN 73 (147)
Q Consensus 5 l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~---~D~~~~~~~~~~~~~~~~~~g~id~l-ag~~~~ 73 (147)
.+++|.+|++.+..++-++++...+....+ ...++. .=++..++ ++++++|.+. .+|+| .|...+
T Consensus 104 a~~~~~~vfllGgkp~V~~~a~~~l~~~~p-~l~ivg~h~GYf~~~e~-~~i~~~I~~s--~pdil~VgmG~P 172 (253)
T COG1922 104 AAEEGKRVFLLGGKPGVAEQAAAKLRAKYP-GLKIVGSHDGYFDPEEE-EAIVERIAAS--GPDILLVGMGVP 172 (253)
T ss_pred hCccCceEEEecCCHHHHHHHHHHHHHHCC-CceEEEecCCCCChhhH-HHHHHHHHhc--CCCEEEEeCCCc
Confidence 456689999999999999999999988775 233333 33555555 7888888764 78999 776644
No 291
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=92.15 E-value=0.24 Score=36.75 Aligned_cols=51 Identities=10% Similarity=0.032 Sum_probs=40.4
Q ss_pred ccccccCC-cEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHH
Q 040927 2 KRSNQVHY-SMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHF 56 (147)
Q Consensus 2 ~~~l~~~G-~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~ 56 (147)
++.|+++| .+|++.+|+.++..++.+... .++....+|+.|.+++.+++++
T Consensus 17 a~~la~~~d~~V~iAdRs~~~~~~i~~~~~----~~v~~~~vD~~d~~al~~li~~ 68 (389)
T COG1748 17 AHKLAQNGDGEVTIADRSKEKCARIAELIG----GKVEALQVDAADVDALVALIKD 68 (389)
T ss_pred HHHHHhCCCceEEEEeCCHHHHHHHHhhcc----ccceeEEecccChHHHHHHHhc
Confidence 45678888 889999999988877655542 2689999999999888777655
No 292
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=91.96 E-value=1.1 Score=27.09 Aligned_cols=67 Identities=12% Similarity=0.043 Sum_probs=46.0
Q ss_pred cccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEe-cCCCHHHHHHHHHHHHhhcCCccEE-ecCC
Q 040927 3 RSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLL-DVTDPASVDSLVHFVSSQFGKLDIL-GGLP 71 (147)
Q Consensus 3 ~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~-D~~~~~~~~~~~~~~~~~~g~id~l-ag~~ 71 (147)
..|.+.|++|.+.+-+... +++.+.+..... ++..+.+ ...+.....++.+.+++..+.+-++ .|..
T Consensus 22 ~~l~~~G~~v~~~d~~~~~-~~l~~~~~~~~p-d~V~iS~~~~~~~~~~~~l~~~~k~~~p~~~iv~GG~~ 90 (121)
T PF02310_consen 22 AYLRKAGHEVDILDANVPP-EELVEALRAERP-DVVGISVSMTPNLPEAKRLARAIKERNPNIPIVVGGPH 90 (121)
T ss_dssp HHHHHTTBEEEEEESSB-H-HHHHHHHHHTTC-SEEEEEESSSTHHHHHHHHHHHHHTTCTTSEEEEEESS
T ss_pred HHHHHCCCeEEEECCCCCH-HHHHHHHhcCCC-cEEEEEccCcCcHHHHHHHHHHHHhcCCCCEEEEECCc
Confidence 3456679999988776533 556666666554 5777777 6677778888888877776666666 5543
No 293
>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
Probab=91.93 E-value=1 Score=31.32 Aligned_cols=66 Identities=9% Similarity=-0.061 Sum_probs=45.1
Q ss_pred ccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE-ecCCCc
Q 040927 6 QVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL-GGLPDN 73 (147)
Q Consensus 6 ~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l-ag~~~~ 73 (147)
.++|++|++++.+++.++++.+.++...+-++....--.-++++.+.+++.+.+. .+|++ .|...+
T Consensus 102 ~~~~~~v~llG~~~~v~~~a~~~l~~~y~l~i~g~~~Gyf~~~e~~~i~~~I~~s--~~dil~VglG~P 168 (243)
T PRK03692 102 GKEGTPVFLVGGKPEVLAQTEAKLRTQWNVNIVGSQDGYFTPEQRQALFERIHAS--GAKIVTVAMGSP 168 (243)
T ss_pred HhcCCeEEEECCCHHHHHHHHHHHHHHhCCEEEEEeCCCCCHHHHHHHHHHHHhc--CCCEEEEECCCc
Confidence 4578999999999999999988887655323322222222455666778888764 78999 777644
No 294
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=91.85 E-value=0.21 Score=34.27 Aligned_cols=47 Identities=17% Similarity=0.102 Sum_probs=33.0
Q ss_pred CccccccCCcEEEEeecChhhHHHHHH-HHHhcCCCceEEEEecCCCHHHHHHH
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVE-KLKNSGCDNVIFHLLDVTDPASVDSL 53 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~-~l~~~~~~~~~~~~~D~~~~~~~~~~ 53 (147)
+|+.|.+.|++|+++.++.+..++... ++ ..+.+.+|.+|++-++++
T Consensus 15 va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~------~~~~v~gd~t~~~~L~~a 62 (225)
T COG0569 15 VARELSEEGHNVVLIDRDEERVEEFLADEL------DTHVVIGDATDEDVLEEA 62 (225)
T ss_pred HHHHHHhCCCceEEEEcCHHHHHHHhhhhc------ceEEEEecCCCHHHHHhc
Confidence 467899999999999999988776433 22 256666666666555443
No 295
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=91.53 E-value=0.26 Score=36.48 Aligned_cols=51 Identities=25% Similarity=0.253 Sum_probs=35.7
Q ss_pred ccccccCC-c-EEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHH
Q 040927 2 KRSNQVHY-S-MGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVH 55 (147)
Q Consensus 2 ~~~l~~~G-~-~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~ 55 (147)
++.|++.+ . +|++.+|+.++++++.+++ .+ .++..+.+|+.|.+++.++++
T Consensus 14 ~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~-~~~~~~~~d~~~~~~l~~~~~ 66 (386)
T PF03435_consen 14 ARLLARRGPFEEVTVADRNPEKAERLAEKL--LG-DRVEAVQVDVNDPESLAELLR 66 (386)
T ss_dssp HHHHHCTTCE-EEEEEESSHHHHHHHHT----TT-TTEEEEE--TTTHHHHHHHHT
T ss_pred HHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cc-cceeEEEEecCCHHHHHHHHh
Confidence 34566665 4 7999999999888877665 22 369999999999998877653
No 296
>PLN02503 fatty acyl-CoA reductase 2
Probab=91.52 E-value=2.5 Score=33.56 Aligned_cols=73 Identities=11% Similarity=0.105 Sum_probs=45.1
Q ss_pred ceEEEEecCCCHH-HH-HHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccC
Q 040927 36 NVIFHLLDVTDPA-SV-DSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLS 110 (147)
Q Consensus 36 ~~~~~~~D~~~~~-~~-~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 110 (147)
++..+..|++++. .+ ....+.+.+ .+|++ |+.... . +..+..+++|+.++.++++.+...-
T Consensus 193 Ki~~v~GDl~d~~LGLs~~~~~~L~~---~vDiVIH~AA~v~f-~-------~~~~~a~~vNV~GT~nLLelA~~~~--- 258 (605)
T PLN02503 193 KLVPVVGNVCESNLGLEPDLADEIAK---EVDVIINSAANTTF-D-------ERYDVAIDINTRGPCHLMSFAKKCK--- 258 (605)
T ss_pred cEEEEEeeCCCcccCCCHHHHHHHHh---cCCEEEECcccccc-c-------cCHHHHHHHHHHHHHHHHHHHHHcC---
Confidence 6888999999872 00 011222222 47888 544321 1 2356788999999999999876431
Q ss_pred CCCeEEEEcCCC
Q 040927 111 DSPRIVNASSSM 122 (147)
Q Consensus 111 ~~~~iv~isS~~ 122 (147)
....+|++||..
T Consensus 259 ~lk~fV~vSTay 270 (605)
T PLN02503 259 KLKLFLQVSTAY 270 (605)
T ss_pred CCCeEEEccCce
Confidence 124588888743
No 297
>PLN00016 RNA-binding protein; Provisional
Probab=91.50 E-value=0.6 Score=34.41 Aligned_cols=43 Identities=12% Similarity=-0.027 Sum_probs=27.0
Q ss_pred CccccccCCcEEEEeecChhhHHHHH-------HHHHhcCCCceEEEEecCCC
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAV-------EKLKNSGCDNVIFHLLDVTD 46 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~-------~~l~~~~~~~~~~~~~D~~~ 46 (147)
+++.|.++|++|+++.|+......+. .++... .+.++.+|+.|
T Consensus 72 lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~---~v~~v~~D~~d 121 (378)
T PLN00016 72 LAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSA---GVKTVWGDPAD 121 (378)
T ss_pred HHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhc---CceEEEecHHH
Confidence 35678889999999999865422211 122211 36778888865
No 298
>PLN02996 fatty acyl-CoA reductase
Probab=90.39 E-value=5.6 Score=30.71 Aligned_cols=69 Identities=12% Similarity=0.081 Sum_probs=44.7
Q ss_pred ceEEEEecCCCH-------HHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHH
Q 040927 36 NVIFHLLDVTDP-------ASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIP 105 (147)
Q Consensus 36 ~~~~~~~D~~~~-------~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 105 (147)
++.++.+|++++ +....++ ..+|++ |+.... . +..+..+++|+.|+..+++++..
T Consensus 85 kv~~i~GDl~~~~LGLs~~~~~~~l~-------~~vD~ViH~AA~v~~-~-------~~~~~~~~~Nv~gt~~ll~~a~~ 149 (491)
T PLN02996 85 KVTPVPGDISYDDLGVKDSNLREEMW-------KEIDIVVNLAATTNF-D-------ERYDVALGINTLGALNVLNFAKK 149 (491)
T ss_pred CEEEEecccCCcCCCCChHHHHHHHH-------hCCCEEEECccccCC-c-------CCHHHHHHHHHHHHHHHHHHHHh
Confidence 688999999854 2233322 247888 554321 1 23466889999999999988764
Q ss_pred hhccCCCCeEEEEcCCC
Q 040927 106 LLQLSDSPRIVNASSSM 122 (147)
Q Consensus 106 ~l~~~~~~~iv~isS~~ 122 (147)
.- +..++|++||..
T Consensus 150 ~~---~~k~~V~vST~~ 163 (491)
T PLN02996 150 CV---KVKMLLHVSTAY 163 (491)
T ss_pred cC---CCCeEEEEeeeE
Confidence 21 224689988865
No 299
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=90.14 E-value=2 Score=28.07 Aligned_cols=65 Identities=14% Similarity=-0.009 Sum_probs=43.8
Q ss_pred cccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEE---ecCCCHHHHHHHHHHHHhhcCCccEE-ecCCCc
Q 040927 5 NQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHL---LDVTDPASVDSLVHFVSSQFGKLDIL-GGLPDN 73 (147)
Q Consensus 5 l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~---~D~~~~~~~~~~~~~~~~~~g~id~l-ag~~~~ 73 (147)
..+++.+|++++.+++.++++.+.++...+ .+.++. .-.. .++...+++.+.+. .+|++ .|...+
T Consensus 42 ~~~~~~~v~llG~~~~~~~~~~~~l~~~yp-~l~i~g~~~g~~~-~~~~~~i~~~I~~~--~pdiv~vglG~P 110 (171)
T cd06533 42 AAQKGLRVFLLGAKPEVLEKAAERLRARYP-GLKIVGYHHGYFG-PEEEEEIIERINAS--GADILFVGLGAP 110 (171)
T ss_pred HHHcCCeEEEECCCHHHHHHHHHHHHHHCC-CcEEEEecCCCCC-hhhHHHHHHHHHHc--CCCEEEEECCCC
Confidence 345689999999999999999888887654 344333 2232 33334467777654 78999 776634
No 300
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=89.59 E-value=1.2 Score=31.16 Aligned_cols=82 Identities=12% Similarity=-0.029 Sum_probs=46.2
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhh
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKML 78 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~ 78 (147)
++.|.+.|++|++++|+........ ... ..|... ... .+.+..+|++ +|......
T Consensus 15 ~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~--~~~~~~-~~~-------~~~~~~~D~Vvh~a~~~~~~~--- 72 (292)
T TIGR01777 15 TQRLTKDGHEVTILTRSPPAGANTK---------WEG--YKPWAP-LAE-------SEALEGADAVINLAGEPIADK--- 72 (292)
T ss_pred HHHHHHcCCEEEEEeCCCCCCCccc---------cee--eecccc-cch-------hhhcCCCCEEEECCCCCcccc---
Confidence 5678889999999999875432110 001 112221 111 1233568888 55431111
Q ss_pred cccHHHHHHhHHHhhhhHHHHHHHHHH
Q 040927 79 TQTYELAEKCIQTNYYGNKRMCEALIP 105 (147)
Q Consensus 79 ~~~~~~~~~~~~~n~~~~~~l~~~~~~ 105 (147)
..+.+..+..+++|+.++..+++++..
T Consensus 73 ~~~~~~~~~~~~~n~~~~~~l~~a~~~ 99 (292)
T TIGR01777 73 RWTEERKQEIRDSRIDTTRALVEAIAA 99 (292)
T ss_pred cCCHHHHHHHHhcccHHHHHHHHHHHh
Confidence 123344566778999998888888754
No 301
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=89.44 E-value=0.43 Score=28.67 Aligned_cols=45 Identities=18% Similarity=0.096 Sum_probs=31.2
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHH
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSL 53 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~ 53 (147)
++.|.+.+.+|+++.++.+..++. ...+ +.++.+|.++++.++++
T Consensus 14 ~~~L~~~~~~vvvid~d~~~~~~~----~~~~---~~~i~gd~~~~~~l~~a 58 (116)
T PF02254_consen 14 AEQLKEGGIDVVVIDRDPERVEEL----REEG---VEVIYGDATDPEVLERA 58 (116)
T ss_dssp HHHHHHTTSEEEEEESSHHHHHHH----HHTT---SEEEES-TTSHHHHHHT
T ss_pred HHHHHhCCCEEEEEECCcHHHHHH----Hhcc---cccccccchhhhHHhhc
Confidence 355667677999999998765543 3332 67888999998877654
No 302
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=89.40 E-value=0.4 Score=35.85 Aligned_cols=55 Identities=11% Similarity=0.029 Sum_probs=34.7
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCC
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLP 71 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~ 71 (147)
++.|+++|++|++++++.. ++ .. .....+|+++.+++.+.+. +.++.+|++ ||+.
T Consensus 221 A~~l~~~Ga~V~~v~~~~~-~~--------~~---~~~~~~dv~~~~~~~~~v~---~~~~~~DilI~~Aav~ 278 (399)
T PRK05579 221 ARAAARRGADVTLVSGPVN-LP--------TP---AGVKRIDVESAQEMLDAVL---AALPQADIFIMAAAVA 278 (399)
T ss_pred HHHHHHCCCEEEEeCCCcc-cc--------CC---CCcEEEccCCHHHHHHHHH---HhcCCCCEEEEccccc
Confidence 4566777777777776542 10 01 1134579998888766654 557889998 6643
No 303
>PF03848 TehB: Tellurite resistance protein TehB; InterPro: IPR015985 Tellurite resistance protein TehB is part of a tellurite-reducing operon tehA and tehB. When present in high copy number, TehB is responsible for potassium tellurite resistance, probably by increasing the reduction rate of tellurite to metallic tellurium within the bacterium. TehB is a cytoplasmic protein which possesses three conserved motifs (I, II, and III) found in S-adenosyl-L-methionine (SAM)-dependent non-nucleic acid methyltransferases []. Conformational changes in TehB are observed upon binding of both tellurite and SAM, suggesting that TehB utilises a methyltransferase activity in the detoxification of tellurite. This entry represents the methyltransferase domain found in all TehB proteins.; PDB: 2KW5_A 3MER_B 3M70_A 2I6G_A 4DQ0_D 2XVA_B 2XVM_A.
Probab=89.39 E-value=0.77 Score=30.76 Aligned_cols=44 Identities=9% Similarity=-0.136 Sum_probs=31.6
Q ss_pred cccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCH
Q 040927 3 RSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDP 47 (147)
Q Consensus 3 ~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~ 47 (147)
..|+++|+.|..++.+...++.+.+..+..+- .+....+|+.+.
T Consensus 46 lyLA~~G~~VtAvD~s~~al~~l~~~a~~~~l-~i~~~~~Dl~~~ 89 (192)
T PF03848_consen 46 LYLASQGFDVTAVDISPVALEKLQRLAEEEGL-DIRTRVADLNDF 89 (192)
T ss_dssp HHHHHTT-EEEEEESSHHHHHHHHHHHHHTT--TEEEEE-BGCCB
T ss_pred HHHHHCCCeEEEEECCHHHHHHHHHHHhhcCc-eeEEEEecchhc
Confidence 46889999999999999888876555544444 478888888764
No 304
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=88.07 E-value=3.1 Score=36.05 Aligned_cols=105 Identities=13% Similarity=0.048 Sum_probs=56.6
Q ss_pred ccccCC----cEEEEeecChhh---HHHHHHHHHhcC------CCceEEEEecCCCHHH--HHHHHHHHHhhcCCccEE-
Q 040927 4 SNQVHY----SMGEATTKDEKR---GLAAVEKLKNSG------CDNVIFHLLDVTDPAS--VDSLVHFVSSQFGKLDIL- 67 (147)
Q Consensus 4 ~l~~~G----~~v~l~~r~~~~---~~~~~~~l~~~~------~~~~~~~~~D~~~~~~--~~~~~~~~~~~~g~id~l- 67 (147)
.|.+.| ++|+.+.|+... .+++.+.+...+ ..++.++.+|++++.- -...+.++. ..+|.+
T Consensus 990 ~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl~~~~~~~l~---~~~d~ii 1066 (1389)
T TIGR03443 990 DLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGLSDEKWSDLT---NEVDVII 1066 (1389)
T ss_pred HHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCcCHHHHHHHH---hcCCEEE
Confidence 444444 778888886432 222322222211 1257888899986520 011122222 357777
Q ss_pred --ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCC
Q 040927 68 --GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMG 123 (147)
Q Consensus 68 --ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~ 123 (147)
|+.... ..+. ......|+.|+..+++.+... +..+++++||.+.
T Consensus 1067 H~Aa~~~~-----~~~~---~~~~~~nv~gt~~ll~~a~~~----~~~~~v~vSS~~v 1112 (1389)
T TIGR03443 1067 HNGALVHW-----VYPY---SKLRDANVIGTINVLNLCAEG----KAKQFSFVSSTSA 1112 (1389)
T ss_pred ECCcEecC-----ccCH---HHHHHhHHHHHHHHHHHHHhC----CCceEEEEeCeee
Confidence 433211 1122 334457999999998887532 3357999999654
No 305
>PF04131 NanE: Putative N-acetylmannosamine-6-phosphate epimerase; InterPro: IPR007260 This family represents a putative ManNAc-6-P-to-GlcNAc-6P epimerase in the N-acetylmannosamine (ManNAc) utilization pathway found mainly in pathogenic bacteria for the reaction: N-acyl-D-glucosamine 6-phosphate = N-acyl-D-mannosamine 6-phosphate It is probably encoded by the yhcJ gene [].; GO: 0047465 N-acylglucosamine-6-phosphate 2-epimerase activity, 0006051 N-acetylmannosamine metabolic process; PDB: 1Y0E_B 3IGS_A 1YXY_A 3Q58_B.
Probab=87.44 E-value=2.3 Score=28.43 Aligned_cols=55 Identities=9% Similarity=-0.036 Sum_probs=36.3
Q ss_pred cccccCCcEEEEeecC----hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 3 RSNQVHYSMGEATTKD----EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 3 ~~l~~~G~~v~l~~r~----~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
+.+.+.|++++.++-+ +..++++..+++..+ ..+-+|+++.++.....+ -..|++
T Consensus 58 ~~l~~aGadIIAlDaT~R~Rp~~l~~li~~i~~~~----~l~MADist~ee~~~A~~------~G~D~I 116 (192)
T PF04131_consen 58 DALAEAGADIIALDATDRPRPETLEELIREIKEKY----QLVMADISTLEEAINAAE------LGFDII 116 (192)
T ss_dssp HHHHHCT-SEEEEE-SSSS-SS-HHHHHHHHHHCT----SEEEEE-SSHHHHHHHHH------TT-SEE
T ss_pred HHHHHcCCCEEEEecCCCCCCcCHHHHHHHHHHhC----cEEeeecCCHHHHHHHHH------cCCCEE
Confidence 4677889999998732 366888888888765 556689998887755432 258998
No 306
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=87.38 E-value=0.73 Score=31.35 Aligned_cols=48 Identities=19% Similarity=0.135 Sum_probs=31.3
Q ss_pred cccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHH
Q 040927 3 RSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVH 55 (147)
Q Consensus 3 ~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~ 55 (147)
+.|.+.|++|.++.|+... ...++++..| +.++.+|..|++++.++++
T Consensus 16 ~~L~~~~~~V~~l~R~~~~--~~~~~l~~~g---~~vv~~d~~~~~~l~~al~ 63 (233)
T PF05368_consen 16 RALLSAGFSVRALVRDPSS--DRAQQLQALG---AEVVEADYDDPESLVAALK 63 (233)
T ss_dssp HHHHHTTGCEEEEESSSHH--HHHHHHHHTT---TEEEES-TT-HHHHHHHHT
T ss_pred HHHHhCCCCcEEEEeccch--hhhhhhhccc---ceEeecccCCHHHHHHHHc
Confidence 4566789999999998732 2344555544 4667889888887766653
No 307
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=86.71 E-value=3.6 Score=24.91 Aligned_cols=67 Identities=15% Similarity=-0.041 Sum_probs=43.6
Q ss_pred cccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEe-cCCCHHHHHHHHHHHHhhcC-CccEE-ecCC
Q 040927 3 RSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLL-DVTDPASVDSLVHFVSSQFG-KLDIL-GGLP 71 (147)
Q Consensus 3 ~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~-D~~~~~~~~~~~~~~~~~~g-~id~l-ag~~ 71 (147)
..|...|++|+-.+.+. ..+++.+.+.+... ++..+.+ +-.....+.++++.+++... .+.++ .|..
T Consensus 21 ~~l~~~G~~V~~lg~~~-~~~~l~~~~~~~~p-dvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~ 90 (119)
T cd02067 21 RALRDAGFEVIDLGVDV-PPEEIVEAAKEEDA-DAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGAI 90 (119)
T ss_pred HHHHHCCCEEEECCCCC-CHHHHHHHHHHcCC-CEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECCC
Confidence 34667899998877553 34566666665554 4665555 45667788888888888744 45555 5543
No 308
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=86.58 E-value=12 Score=35.06 Aligned_cols=133 Identities=14% Similarity=0.060 Sum_probs=74.1
Q ss_pred CcEEEEeecChhhHHHHHHHHHhcCCCceEEEE--------------------ecCCCHHHHHHHHHHHHhhcCCccEE-
Q 040927 9 YSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHL--------------------LDVTDPASVDSLVHFVSSQFGKLDIL- 67 (147)
Q Consensus 9 G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~--------------------~D~~~~~~~~~~~~~~~~~~g~id~l- 67 (147)
|..++++.-.......+.+.|...|. .+..+. ..-.|..++..++..+....+.++.+
T Consensus 1755 ~~~~~v~~d~~~~~~~L~~~L~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i 1833 (2582)
T TIGR02813 1755 GANALVIDDDGHNAGVLAEKLIAAGW-QVAVVRSPWVVSHSASPLASAIASVTLGTIDDTSIEAVIKDIEEKTAQIDGFI 1833 (2582)
T ss_pred CceeEEEcCCcchHHHHHHHHHhCCC-eEEEeeccccccccccccccccccccccccchHHHHHHHHhhhccccccceEE
Confidence 55556655455555667778887775 344431 11234456666777776666677666
Q ss_pred --ecCCCc-chhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc--------------
Q 040927 68 --GGLPDN-WYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN-------------- 130 (147)
Q Consensus 68 --ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~-------------- 130 (147)
.+.... ..+..... ....-...+...|.+.|.+.+.+...+++.++.+|+..|..|+...
T Consensus 1834 ~l~~~~~~~~~~~~~~~---~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~~~~~~~~~~~~~~~ 1910 (2582)
T TIGR02813 1834 HLQPQHKSVADKVDAIE---LPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNGDADSGTQQVKAELN 1910 (2582)
T ss_pred Eeccccccccccccccc---cchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCccccCCccccccccccccchh
Confidence 221100 00000011 1111113344567778887777666666889999999888776321
Q ss_pred hhhhccccchhhhhccC
Q 040927 131 EWAKGVLSDWMRCRRSI 147 (147)
Q Consensus 131 ~~~~~~~~~~~al~~e~ 147 (147)
.++..++.+ ++++|+
T Consensus 1911 ~a~l~Gl~K--tl~~E~ 1925 (2582)
T TIGR02813 1911 QAALAGLTK--TLNHEW 1925 (2582)
T ss_pred hhhHHHHHH--hHHHHC
Confidence 245666666 677664
No 309
>PRK04148 hypothetical protein; Provisional
Probab=86.34 E-value=0.76 Score=28.91 Aligned_cols=39 Identities=13% Similarity=-0.073 Sum_probs=21.5
Q ss_pred cccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHH
Q 040927 3 RSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPA 48 (147)
Q Consensus 3 ~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~ 48 (147)
..|++.|++|+.++.++...+.+.+. .+.++.+|+.+++
T Consensus 33 ~~L~~~G~~ViaIDi~~~aV~~a~~~-------~~~~v~dDlf~p~ 71 (134)
T PRK04148 33 KKLKESGFDVIVIDINEKAVEKAKKL-------GLNAFVDDLFNPN 71 (134)
T ss_pred HHHHHCCCEEEEEECCHHHHHHHHHh-------CCeEEECcCCCCC
Confidence 34566677777777776543333221 1456666666553
No 310
>PRK14968 putative methyltransferase; Provisional
Probab=86.05 E-value=7 Score=25.40 Aligned_cols=43 Identities=12% Similarity=-0.138 Sum_probs=28.7
Q ss_pred ccccCCcEEEEeecChhhHHHHHHHHHhcCCCc--eEEEEecCCC
Q 040927 4 SNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDN--VIFHLLDVTD 46 (147)
Q Consensus 4 ~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~--~~~~~~D~~~ 46 (147)
.+++.|.+|+.++.+++..+...+.+...+..+ +.++.+|+.+
T Consensus 40 ~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~ 84 (188)
T PRK14968 40 VAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFE 84 (188)
T ss_pred HHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEeccccc
Confidence 345568889999999877776666665443212 6777777644
No 311
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=82.37 E-value=1.3 Score=34.62 Aligned_cols=44 Identities=7% Similarity=-0.169 Sum_probs=27.4
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHH
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDS 52 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~ 52 (147)
++.|.++|+++++++.|++..++..+ . ....+.+|.+|++..++
T Consensus 433 a~~L~~~g~~vvvId~d~~~~~~~~~----~---g~~~i~GD~~~~~~L~~ 476 (558)
T PRK10669 433 GEKLLAAGIPLVVIETSRTRVDELRE----R---GIRAVLGNAANEEIMQL 476 (558)
T ss_pred HHHHHHCCCCEEEEECCHHHHHHHHH----C---CCeEEEcCCCCHHHHHh
Confidence 45667778888888888766554432 1 25566667776655433
No 312
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=82.10 E-value=5.3 Score=29.69 Aligned_cols=105 Identities=10% Similarity=0.061 Sum_probs=58.4
Q ss_pred cccCCcEEEEeecChh---hHHHHHHHHH------hcCCCceEEEEecCCCHH--HHHHHHHHHHhhcCCccEE--ec-C
Q 040927 5 NQVHYSMGEATTKDEK---RGLAAVEKLK------NSGCDNVIFHLLDVTDPA--SVDSLVHFVSSQFGKLDIL--GG-L 70 (147)
Q Consensus 5 l~~~G~~v~l~~r~~~---~~~~~~~~l~------~~~~~~~~~~~~D~~~~~--~~~~~~~~~~~~~g~id~l--ag-~ 70 (147)
|.+.-++|+...|-.+ ..+++.+.+. +...+++..+..|++.+. =-+.-++++. ..+|.| .| .
T Consensus 21 L~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~~~~La---~~vD~I~H~gA~ 97 (382)
T COG3320 21 LDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERTWQELA---ENVDLIIHNAAL 97 (382)
T ss_pred HhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHHHHHHh---hhcceEEecchh
Confidence 3344578888877432 2344444433 233457999999998532 1111122222 357888 33 2
Q ss_pred CCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCC
Q 040927 71 PDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGK 124 (147)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~ 124 (147)
.....| + .+....|+.|+..+++.+.-. +...+.+|||++..
T Consensus 98 Vn~v~p-----Y---s~L~~~NVlGT~evlrLa~~g----k~Kp~~yVSsisv~ 139 (382)
T COG3320 98 VNHVFP-----Y---SELRGANVLGTAEVLRLAATG----KPKPLHYVSSISVG 139 (382)
T ss_pred hcccCc-----H---HHhcCcchHhHHHHHHHHhcC----CCceeEEEeeeeec
Confidence 212222 2 344567999998888876532 22348999997743
No 313
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=80.00 E-value=8.2 Score=26.95 Aligned_cols=80 Identities=19% Similarity=0.200 Sum_probs=44.0
Q ss_pred cEEEEeecChhhHHHHHHHHHhcCC--CceEE---EEecCCCHHHHHHHHHHHHhhcCCccEE--ecCCCcchhhhcccH
Q 040927 10 SMGEATTKDEKRGLAAVEKLKNSGC--DNVIF---HLLDVTDPASVDSLVHFVSSQFGKLDIL--GGLPDNWYKMLTQTY 82 (147)
Q Consensus 10 ~~v~l~~r~~~~~~~~~~~l~~~~~--~~~~~---~~~D~~~~~~~~~~~~~~~~~~g~id~l--ag~~~~~~~~~~~~~ 82 (147)
.+|.+++.+.=-...+.+.+++.+. ++..+ -.+|+++.++.+.++++.+ +..++ |+..+..-.-...+.
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~skd~DLt~~a~t~~lF~~ek----PthVIhlAAmVGGlf~N~~ynl 77 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSKDADLTNLADTRALFESEK----PTHVIHLAAMVGGLFHNNTYNL 77 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccccccccchHHHHHHHhccC----CceeeehHhhhcchhhcCCCch
Confidence 3567777665444555556665554 22222 3489999999999987753 55555 221111111113455
Q ss_pred HHHHHhHHHhh
Q 040927 83 ELAEKCIQTNY 93 (147)
Q Consensus 83 ~~~~~~~~~n~ 93 (147)
+-|...+++|-
T Consensus 78 dF~r~Nl~ind 88 (315)
T KOG1431|consen 78 DFIRKNLQIND 88 (315)
T ss_pred HHHhhcceech
Confidence 66666665553
No 314
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=79.99 E-value=2.4 Score=26.49 Aligned_cols=27 Identities=11% Similarity=0.005 Sum_probs=21.5
Q ss_pred cccccCCcE-EEEeecChhhHHHHHHHH
Q 040927 3 RSNQVHYSM-GEATTKDEKRGLAAVEKL 29 (147)
Q Consensus 3 ~~l~~~G~~-v~l~~r~~~~~~~~~~~l 29 (147)
..|...|++ |.++.|+.++++++.+.+
T Consensus 29 ~~L~~~g~~~i~i~nRt~~ra~~l~~~~ 56 (135)
T PF01488_consen 29 AALAALGAKEITIVNRTPERAEALAEEF 56 (135)
T ss_dssp HHHHHTTSSEEEEEESSHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEEECCHHHHHHHHHHc
Confidence 456677877 888899888888888777
No 315
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=78.96 E-value=9.1 Score=25.69 Aligned_cols=62 Identities=10% Similarity=-0.041 Sum_probs=40.8
Q ss_pred ccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEe-cCCCHHHHHHHHHHHHhhcC--CccEE
Q 040927 4 SNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLL-DVTDPASVDSLVHFVSSQFG--KLDIL 67 (147)
Q Consensus 4 ~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~-D~~~~~~~~~~~~~~~~~~g--~id~l 67 (147)
.|...|++|+-.+.+. ..+++.+.+..... ++..+.+ --+....+.++++.+++... .+.++
T Consensus 105 ~l~~~G~~vi~lG~~~-p~~~l~~~~~~~~~-d~v~lS~~~~~~~~~~~~~i~~lr~~~~~~~~~i~ 169 (201)
T cd02070 105 MLEANGFEVIDLGRDV-PPEEFVEAVKEHKP-DILGLSALMTTTMGGMKEVIEALKEAGLRDKVKVM 169 (201)
T ss_pred HHHHCCCEEEECCCCC-CHHHHHHHHHHcCC-CEEEEeccccccHHHHHHHHHHHHHCCCCcCCeEE
Confidence 4567899988777553 24556666665554 4666665 45556788888888888744 45555
No 316
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=77.62 E-value=2.9 Score=28.41 Aligned_cols=46 Identities=7% Similarity=-0.265 Sum_probs=29.3
Q ss_pred cccccCCcEEEEeecChhhHHHHHHHHHh------------cCCCceEEEEecCCCHH
Q 040927 3 RSNQVHYSMGEATTKDEKRGLAAVEKLKN------------SGCDNVIFHLLDVTDPA 48 (147)
Q Consensus 3 ~~l~~~G~~v~l~~r~~~~~~~~~~~l~~------------~~~~~~~~~~~D~~~~~ 48 (147)
..|+++|++|+.++.++..++...++-.. ....++.++.+|+.+..
T Consensus 50 ~~LA~~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 107 (213)
T TIGR03840 50 AWLAEQGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALT 107 (213)
T ss_pred HHHHhCCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCC
Confidence 46788899999999988777754332110 01124677788887653
No 317
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=77.56 E-value=3.9 Score=30.88 Aligned_cols=42 Identities=17% Similarity=0.065 Sum_probs=26.3
Q ss_pred ccccccCCcEEEEeecCh-hhHHHHHHHHHhcCCCceEEEEecCCC
Q 040927 2 KRSNQVHYSMGEATTKDE-KRGLAAVEKLKNSGCDNVIFHLLDVTD 46 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~D~~~ 46 (147)
++.|++.|++|.+++++. +..++..+++...+ +.++..|..+
T Consensus 21 A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~---~~~~~~~~~~ 63 (450)
T PRK14106 21 AKFLKKLGAKVILTDEKEEDQLKEALEELGELG---IELVLGEYPE 63 (450)
T ss_pred HHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC---CEEEeCCcch
Confidence 567888899999888874 34444455554433 3455566554
No 318
>PRK07807 inosine 5-monophosphate dehydrogenase; Validated
Probab=77.54 E-value=14 Score=28.60 Aligned_cols=61 Identities=16% Similarity=0.077 Sum_probs=43.9
Q ss_pred cccccCCcEEEEeecC---hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE-ecC
Q 040927 3 RSNQVHYSMGEATTKD---EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL-GGL 70 (147)
Q Consensus 3 ~~l~~~G~~v~l~~r~---~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l-ag~ 70 (147)
..|.+.|.++++++-. .....+++++++...+ ++.++..|+...+....+.+. ..|.+ .|+
T Consensus 233 ~~Lv~aGvd~i~~D~a~~~~~~~~~~i~~ik~~~p-~~~v~agnv~t~~~a~~l~~a------Gad~v~vgi 297 (479)
T PRK07807 233 RALLEAGVDVLVVDTAHGHQEKMLEALRAVRALDP-GVPIVAGNVVTAEGTRDLVEA------GADIVKVGV 297 (479)
T ss_pred HHHHHhCCCEEEEeccCCccHHHHHHHHHHHHHCC-CCeEEeeccCCHHHHHHHHHc------CCCEEEECc
Confidence 4567789998887643 3456677788887765 478888899998888777642 57887 443
No 319
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=77.18 E-value=3.3 Score=28.60 Aligned_cols=46 Identities=20% Similarity=0.091 Sum_probs=36.0
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHH
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVH 55 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~ 55 (147)
++.|.++|++|.+..|+.+...... . .+.+...|+.+++.+...++
T Consensus 17 ~~~L~~~~~~v~~~~r~~~~~~~~~-------~-~v~~~~~d~~~~~~l~~a~~ 62 (275)
T COG0702 17 VRELLARGHEVRAAVRNPEAAAALA-------G-GVEVVLGDLRDPKSLVAGAK 62 (275)
T ss_pred HHHHHhCCCEEEEEEeCHHHHHhhc-------C-CcEEEEeccCCHhHHHHHhc
Confidence 5677888999999999988766543 2 47888899999888866653
No 320
>COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]
Probab=76.56 E-value=14 Score=26.11 Aligned_cols=65 Identities=8% Similarity=0.055 Sum_probs=39.5
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHH-----------HHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEK-----------LKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~-----------l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
|++.|...|+.|+..++|....+++.++ +...+.++..++-+-..| -.++.++++...+..=|++
T Consensus 15 ~v~rl~~~ghdvV~yD~n~~av~~~~~~ga~~a~sl~el~~~L~~pr~vWlMvPag~--it~~vi~~la~~L~~GDiv 90 (300)
T COG1023 15 LVRRLLDGGHDVVGYDVNQTAVEELKDEGATGAASLDELVAKLSAPRIVWLMVPAGD--ITDAVIDDLAPLLSAGDIV 90 (300)
T ss_pred HHHHHHhCCCeEEEEcCCHHHHHHHHhcCCccccCHHHHHHhcCCCcEEEEEccCCC--chHHHHHHHHhhcCCCCEE
Confidence 3567889999999999998766655432 222343455544443332 2344566666665566777
No 321
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=75.96 E-value=5.5 Score=30.04 Aligned_cols=114 Identities=14% Similarity=-0.023 Sum_probs=57.0
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcC-CccEE-ecCCCcchhhhc
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFG-KLDIL-GGLPDNWYKMLT 79 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-~id~l-ag~~~~~~~~~~ 79 (147)
++.|.++|+.|..+.|+.+..+.+.. +.... .....+..|...+.+...-+.+ ..+ ...++ .+........
T Consensus 96 v~~llkrgf~vra~VRd~~~a~~~~~-~~~~d-~~~~~v~~~~~~~~d~~~~~~~---~~~~~~~~v~~~~ggrp~~e-- 168 (411)
T KOG1203|consen 96 VKILLKRGFSVRALVRDEQKAEDLLG-VFFVD-LGLQNVEADVVTAIDILKKLVE---AVPKGVVIVIKGAGGRPEEE-- 168 (411)
T ss_pred HHHHHHCCCeeeeeccChhhhhhhhc-ccccc-cccceeeeccccccchhhhhhh---hccccceeEEecccCCCCcc--
Confidence 35677889999999998877776655 11111 1234445555554444222222 212 12223 2211111110
Q ss_pred ccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc
Q 040927 80 QTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN 130 (147)
Q Consensus 80 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~ 130 (147)
+...-..+.+.|..++++++... +-.++|.+||+.+.......
T Consensus 169 ----d~~~p~~VD~~g~knlvdA~~~a----Gvk~~vlv~si~~~~~~~~~ 211 (411)
T KOG1203|consen 169 ----DIVTPEKVDYEGTKNLVDACKKA----GVKRVVLVGSIGGTKFNQPP 211 (411)
T ss_pred ----cCCCcceecHHHHHHHHHHHHHh----CCceEEEEEeecCcccCCCc
Confidence 11112234455666677776433 33569999998877654433
No 322
>COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]
Probab=75.95 E-value=29 Score=25.66 Aligned_cols=104 Identities=21% Similarity=0.079 Sum_probs=59.4
Q ss_pred cccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE--------ecCCCc-ch
Q 040927 5 NQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--------GGLPDN-WY 75 (147)
Q Consensus 5 l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l--------ag~~~~-~~ 75 (147)
+...|..|+..+.+...+..+.+.++..|..++..+..|.+........ .+..|-+ -|+... +.
T Consensus 178 ~~~~~~iV~A~D~~~~Rl~~l~~nl~RlG~~nv~~~~~d~~~~~~~~~~-------~~~fD~iLlDaPCSg~G~irr~Pd 250 (355)
T COG0144 178 MENEGAIVVAVDVSPKRLKRLRENLKRLGVRNVIVVNKDARRLAELLPG-------GEKFDRILLDAPCSGTGVIRRDPD 250 (355)
T ss_pred cCCCCceEEEEcCCHHHHHHHHHHHHHcCCCceEEEecccccccccccc-------cCcCcEEEECCCCCCCcccccCcc
Confidence 3445777899999999999999999988875567777776543222110 0135555 232211 12
Q ss_pred hhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCC
Q 040927 76 KMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSS 121 (147)
Q Consensus 76 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~ 121 (147)
-....+.+++.+..+... .++...+..++ .+|.+|+.+.+
T Consensus 251 ~~~~~~~~~i~~l~~lQ~----~iL~~a~~~lk--~GG~LVYSTCS 290 (355)
T COG0144 251 VKWRRTPEDIAELAKLQK----EILAAALKLLK--PGGVLVYSTCS 290 (355)
T ss_pred ccccCCHHHHHHHHHHHH----HHHHHHHHhcC--CCCEEEEEccC
Confidence 223344555444433322 34555555553 34788887753
No 323
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=75.70 E-value=8.7 Score=30.66 Aligned_cols=66 Identities=18% Similarity=0.167 Sum_probs=41.1
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHH--------------HHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEK--------------LKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~--------------l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
++.|.++|.++++++.|.+..++..+. +++.+-++...+.+-..|.+....++..+++.++.+.++
T Consensus 416 a~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~d~~~n~~i~~~ar~~~p~~~ii 495 (621)
T PRK03562 416 GRLLLSSGVKMTVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTSLQLVELVKEHFPHLQII 495 (621)
T ss_pred HHHHHhCCCCEEEEECCHHHHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEE
Confidence 466778899999999998876665331 122222234444444555555666667777777776666
No 324
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=75.09 E-value=3.5 Score=30.88 Aligned_cols=55 Identities=7% Similarity=-0.029 Sum_probs=32.2
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHH-HHHHHHHHhhcCCccEE---ecCC
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASV-DSLVHFVSSQFGKLDIL---GGLP 71 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~-~~~~~~~~~~~g~id~l---ag~~ 71 (147)
++.+..+|++|+++.++.... .+ .....+|+++.+++ +.++++ .++.+|++ ||..
T Consensus 218 a~~~~~~Ga~V~~~~g~~~~~---------~~---~~~~~~~v~~~~~~~~~~~~~---~~~~~D~~i~~Aavs 276 (390)
T TIGR00521 218 AEAAYKRGADVTLITGPVSLL---------TP---PGVKSIKVSTAEEMLEAALNE---LAKDFDIFISAAAVA 276 (390)
T ss_pred HHHHHHCCCEEEEeCCCCccC---------CC---CCcEEEEeccHHHHHHHHHHh---hcccCCEEEEccccc
Confidence 455666777777666543210 11 12245789888888 545433 24678998 6654
No 325
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=74.74 E-value=9.2 Score=30.38 Aligned_cols=66 Identities=15% Similarity=0.171 Sum_probs=37.5
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHH--------------HHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEK--------------LKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~--------------l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
++.|.++|.++++.+.|++..++..+. +++.+-++...+.+-..|.+.....+..+++.++.+.++
T Consensus 416 a~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~d~~~n~~i~~~~r~~~p~~~Ii 495 (601)
T PRK03659 416 GRLLMANKMRITVLERDISAVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVITCNEPEDTMKIVELCQQHFPHLHIL 495 (601)
T ss_pred HHHHHhCCCCEEEEECCHHHHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEEeCCHHHHHHHHHHHHHHCCCCeEE
Confidence 466778899999999998776654321 111121223333333444444445556666666666666
No 326
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=74.62 E-value=3.5 Score=26.57 Aligned_cols=61 Identities=13% Similarity=0.074 Sum_probs=37.7
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhc-CC-----CceEEEEecCCCHHHHHHHHHH--HHhhc
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNS-GC-----DNVIFHLLDVTDPASVDSLVHF--VSSQF 61 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~-~~-----~~~~~~~~D~~~~~~~~~~~~~--~~~~~ 61 (147)
|++.|.+.|++|.+.+|+.++.+++.++-... .. ....++..=+.+.++++.++.. +....
T Consensus 16 ~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i~~~l 84 (163)
T PF03446_consen 16 MARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENILAGL 84 (163)
T ss_dssp HHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTHGGGS
T ss_pred HHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHHhhcc
Confidence 35678889999999999988777665431000 00 1234455557777778777766 55443
No 327
>COG3010 NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
Probab=74.44 E-value=23 Score=24.21 Aligned_cols=60 Identities=10% Similarity=-0.043 Sum_probs=37.6
Q ss_pred cccccCCcEEEEeecC-----hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE----ecCCC
Q 040927 3 RSNQVHYSMGEATTKD-----EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL----GGLPD 72 (147)
Q Consensus 3 ~~l~~~G~~v~l~~r~-----~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l----ag~~~ 72 (147)
..|++.|+.|+..+.+ .+.++++++..+.. -...-+|.++.++.....+ -.+|++ .|...
T Consensus 92 d~L~~~Ga~IIA~DaT~R~RP~~~~~~~i~~~k~~----~~l~MAD~St~ee~l~a~~------~G~D~IGTTLsGYT~ 160 (229)
T COG3010 92 DALAEAGADIIAFDATDRPRPDGDLEELIARIKYP----GQLAMADCSTFEEGLNAHK------LGFDIIGTTLSGYTG 160 (229)
T ss_pred HHHHHCCCcEEEeecccCCCCcchHHHHHHHhhcC----CcEEEeccCCHHHHHHHHH------cCCcEEecccccccC
Confidence 4688899999998632 22456665553222 2455689998887755432 278888 55443
No 328
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=74.43 E-value=11 Score=22.97 Aligned_cols=56 Identities=11% Similarity=-0.109 Sum_probs=36.6
Q ss_pred cccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEe-cCCCHHHHHHHHHHHHhh
Q 040927 3 RSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLL-DVTDPASVDSLVHFVSSQ 60 (147)
Q Consensus 3 ~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~-D~~~~~~~~~~~~~~~~~ 60 (147)
..|...|++|+-.+.+. ..+++.+...+..+ ++..+.+ +-...+.+.++++.+++.
T Consensus 21 ~~l~~~G~~vi~lG~~v-p~e~~~~~a~~~~~-d~V~iS~~~~~~~~~~~~~~~~L~~~ 77 (122)
T cd02071 21 RALRDAGFEVIYTGLRQ-TPEEIVEAAIQEDV-DVIGLSSLSGGHMTLFPEVIELLREL 77 (122)
T ss_pred HHHHHCCCEEEECCCCC-CHHHHHHHHHHcCC-CEEEEcccchhhHHHHHHHHHHHHhc
Confidence 34667899999888764 34456666655554 3555443 455567777878888776
No 329
>PRK09287 6-phosphogluconate dehydrogenase; Validated
Probab=72.87 E-value=8.4 Score=29.57 Aligned_cols=67 Identities=15% Similarity=0.080 Sum_probs=40.1
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHH------HHhcCC--------CceEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEK------LKNSGC--------DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDI 66 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~------l~~~~~--------~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 66 (147)
|++.|+++|++|.+.+|+.++.+++.++ +..... .+...+..=+.+.+.++.++..+.....+=|+
T Consensus 5 mA~nL~~~G~~V~v~nrt~~~~~~l~~~~g~~~g~~~~~s~~e~v~~l~~~~~Ii~mv~~g~~v~~Vi~~l~~~l~~Gdi 84 (459)
T PRK09287 5 LALNIASHGYTVAVYNRTPEKTDEFLAEEGKGKKIVPAYTLEEFVASLEKPRKILLMVKAGAPVDAVIEQLLPLLEKGDI 84 (459)
T ss_pred HHHHHHhCCCeEEEECCCHHHHHHHHHhhCCCCCeEeeCCHHHHHhhCCCCCEEEEECCCchHHHHHHHHHHhcCCCCCE
Confidence 4677889999999999998887776653 110000 01223334466666777777666554333344
Q ss_pred E
Q 040927 67 L 67 (147)
Q Consensus 67 l 67 (147)
+
T Consensus 85 i 85 (459)
T PRK09287 85 I 85 (459)
T ss_pred E
Confidence 4
No 330
>PRK06849 hypothetical protein; Provisional
Probab=72.72 E-value=12 Score=27.75 Aligned_cols=61 Identities=10% Similarity=-0.089 Sum_probs=32.2
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
++|.|.+.|++|++++.+..........+ .....+...-.+++...+.+.++.++. .+|++
T Consensus 20 iar~l~~~G~~Vi~~d~~~~~~~~~s~~~-----d~~~~~p~p~~d~~~~~~~L~~i~~~~-~id~v 80 (389)
T PRK06849 20 LARLFHNAGHTVILADSLKYPLSRFSRAV-----DGFYTIPSPRWDPDAYIQALLSIVQRE-NIDLL 80 (389)
T ss_pred HHHHHHHCCCEEEEEeCCchHHHHHHHhh-----hheEEeCCCCCCHHHHHHHHHHHHHHc-CCCEE
Confidence 35778888999999988764432211111 122222222234444444444555553 47887
No 331
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=72.53 E-value=6.3 Score=26.30 Aligned_cols=43 Identities=12% Similarity=-0.120 Sum_probs=25.1
Q ss_pred cccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCC
Q 040927 3 RSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVT 45 (147)
Q Consensus 3 ~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~ 45 (147)
..|+++|++|+.++.+...++...+.....+..++.+...|+.
T Consensus 46 ~~La~~g~~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~~d~~ 88 (197)
T PRK11207 46 LYLAANGFDVTAWDKNPMSIANLERIKAAENLDNLHTAVVDLN 88 (197)
T ss_pred HHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCcceEEecChh
Confidence 3466778888888877766665555444433223455555543
No 332
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=72.13 E-value=5.1 Score=30.25 Aligned_cols=25 Identities=12% Similarity=-0.101 Sum_probs=19.4
Q ss_pred ccccccCCcEEEEeecChhhHHHHH
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAV 26 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~ 26 (147)
++.|.+.|+.|++++++.+..+++.
T Consensus 16 a~~L~~~g~~v~vid~~~~~~~~~~ 40 (453)
T PRK09496 16 AENLSGENNDVTVIDTDEERLRRLQ 40 (453)
T ss_pred HHHHHhCCCcEEEEECCHHHHHHHH
Confidence 4567778999999999987766543
No 333
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=72.07 E-value=5.1 Score=30.30 Aligned_cols=48 Identities=8% Similarity=0.014 Sum_probs=31.2
Q ss_pred hHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCc---hhhhccccchhhhhcc
Q 040927 95 GNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITN---EWAKGVLSDWMRCRRS 146 (147)
Q Consensus 95 ~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~---~~~~~~~~~~~al~~e 146 (147)
+.+.+.+..++.|.. .|+||+++|..+..+.+.. +++...+.. ++++|
T Consensus 101 ~~~~~~~~~l~~l~~--~griv~i~s~~~~~~~~~~~~akaal~gl~r--sla~E 151 (450)
T PRK08261 101 ALYEFFHPVLRSLAP--CGRVVVLGRPPEAAADPAAAAAQRALEGFTR--SLGKE 151 (450)
T ss_pred HHHHHHHHHHHhccC--CCEEEEEccccccCCchHHHHHHHHHHHHHH--HHHHH
Confidence 455677888888864 4899999998775443322 345555555 55555
No 334
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=71.81 E-value=5.5 Score=30.07 Aligned_cols=27 Identities=11% Similarity=0.009 Sum_probs=19.8
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHH
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEK 28 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~ 28 (147)
++.|.+.|++|++++++.+..+++.++
T Consensus 247 ~~~L~~~~~~v~vid~~~~~~~~~~~~ 273 (453)
T PRK09496 247 AKLLEKEGYSVKLIERDPERAEELAEE 273 (453)
T ss_pred HHHHHhCCCeEEEEECCHHHHHHHHHH
Confidence 456777899999999988766655443
No 335
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=69.86 E-value=13 Score=23.41 Aligned_cols=43 Identities=14% Similarity=0.177 Sum_probs=31.6
Q ss_pred cChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHh
Q 040927 17 KDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSS 59 (147)
Q Consensus 17 r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 59 (147)
+|.+.-++.+++|++.|..-..+..|++.+..+....++.+.+
T Consensus 92 kNveRD~r~~~~L~~~GwrvlvVWEC~~r~kas~a~~l~rl~~ 134 (150)
T COG3727 92 KNVERDERDIKRLQQLGWRVLVVWECALRKKASDAARLERLEE 134 (150)
T ss_pred hhhhhhHHHHHHHHHcCCeEEEEEeeechHHHhHHHHHHHHHH
Confidence 4445556677788888873245677999998888888888776
No 336
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=69.56 E-value=10 Score=24.17 Aligned_cols=64 Identities=17% Similarity=-0.050 Sum_probs=36.8
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
++.|...|+.|+..+.....-+-....+++... -+-+-..+-.-.+.+..+++.+++. |.=|++
T Consensus 33 a~~l~d~GfeVi~~g~~~tp~e~v~aA~~~dv~-vIgvSsl~g~h~~l~~~lve~lre~-G~~~i~ 96 (143)
T COG2185 33 ARALADAGFEVINLGLFQTPEEAVRAAVEEDVD-VIGVSSLDGGHLTLVPGLVEALREA-GVEDIL 96 (143)
T ss_pred HHHHHhCCceEEecCCcCCHHHHHHHHHhcCCC-EEEEEeccchHHHHHHHHHHHHHHh-CCcceE
Confidence 467788899998887654433333333333221 1223334666677777877777766 444444
No 337
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=69.36 E-value=9.3 Score=22.40 Aligned_cols=41 Identities=12% Similarity=-0.094 Sum_probs=30.8
Q ss_pred cccc--CCcEEEEeecChhhHHHHHHHHHhc-CCCceEEEEecC
Q 040927 4 SNQV--HYSMGEATTKDEKRGLAAVEKLKNS-GCDNVIFHLLDV 44 (147)
Q Consensus 4 ~l~~--~G~~v~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~ 44 (147)
.+++ .|++|+.++.+++.++...+..... ...++.++..|+
T Consensus 18 ~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~ 61 (112)
T PF12847_consen 18 ALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDA 61 (112)
T ss_dssp HHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCC
T ss_pred HHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECcc
Confidence 3455 7999999999998888777777332 234788998888
No 338
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=68.46 E-value=40 Score=23.97 Aligned_cols=57 Identities=14% Similarity=0.262 Sum_probs=45.0
Q ss_pred cCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcC-CccEE
Q 040927 7 VHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFG-KLDIL 67 (147)
Q Consensus 7 ~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-~id~l 67 (147)
..+..+++++-+..-..++.+.+...|. ++..+ .++.+.++++.+++.++++ .++++
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLv---aR~~~kL~~la~~l~~~~~v~v~vi 61 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-NLILV---ARREDKLEALAKELEDKTGVEVEVI 61 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEE---eCcHHHHHHHHHHHHHhhCceEEEE
Confidence 4577899999999999999999988875 44444 5778899999999988873 45555
No 339
>cd02068 radical_SAM_B12_BD B12 binding domain_like associated with radical SAM domain. This domain shows similarity with B12 (adenosylcobamide) binding domains found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase, but it lacks the signature motif Asp-X-His-X-X-Gly, which contains the histidine that acts as a cobalt ligand. The function of this domain remains unclear.
Probab=68.45 E-value=24 Score=21.50 Aligned_cols=61 Identities=10% Similarity=-0.076 Sum_probs=41.1
Q ss_pred ccccCCcEEEEeecChhhHHHHHHHHHh-cCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 4 SNQVHYSMGEATTKDEKRGLAAVEKLKN-SGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 4 ~l~~~G~~v~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
.+.++|..+...... ..++..+.+.. ... ++..+.+-..+......+.+.+++..+.+-++
T Consensus 11 ~l~~~g~~v~~~~~~--~~~~~~~~~~~~~~p-div~~S~~~~~~~~~~~~~~~ik~~~p~~~iv 72 (127)
T cd02068 11 VLEDAGFIVAEHDVL--SADDIVEDIKELLKP-DVVGISLMTSAIYEALELAKIAKEVLPNVIVV 72 (127)
T ss_pred HHHHCCCeeeecCCC--CHHHHHHHHHHhcCC-CEEEEeeccccHHHHHHHHHHHHHHCCCCEEE
Confidence 445667766665543 33555666654 333 58888888888888888999998886655555
No 340
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=68.35 E-value=3.1 Score=27.89 Aligned_cols=39 Identities=15% Similarity=0.072 Sum_probs=25.7
Q ss_pred cccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHH
Q 040927 3 RSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASV 50 (147)
Q Consensus 3 ~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~ 50 (147)
.+...+|+.|..+.||..++... +.+.....|+.|++++
T Consensus 18 ~EA~~RGHeVTAivRn~~K~~~~---------~~~~i~q~Difd~~~~ 56 (211)
T COG2910 18 KEALKRGHEVTAIVRNASKLAAR---------QGVTILQKDIFDLTSL 56 (211)
T ss_pred HHHHhCCCeeEEEEeChHhcccc---------ccceeecccccChhhh
Confidence 34567899999999998765431 1245566666666554
No 341
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=66.32 E-value=8.8 Score=26.21 Aligned_cols=23 Identities=4% Similarity=-0.439 Sum_probs=16.3
Q ss_pred cccccCCcEEEEeecChhhHHHH
Q 040927 3 RSNQVHYSMGEATTKDEKRGLAA 25 (147)
Q Consensus 3 ~~l~~~G~~v~l~~r~~~~~~~~ 25 (147)
..|+++|++|+.++.++..++..
T Consensus 53 ~~LA~~G~~V~avD~s~~Ai~~~ 75 (218)
T PRK13255 53 LWLAEQGHEVLGVELSELAVEQF 75 (218)
T ss_pred HHHHhCCCeEEEEccCHHHHHHH
Confidence 35677788888888777666654
No 342
>PF15117 UPF0697: Uncharacterised protein family UPF0697
Probab=66.01 E-value=9.2 Score=21.97 Aligned_cols=62 Identities=16% Similarity=0.060 Sum_probs=35.0
Q ss_pred HHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCchhhhccccchhhhhcc
Q 040927 82 YELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNEWAKGVLSDWMRCRRS 146 (147)
Q Consensus 82 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~~~~~~~~~~al~~e 146 (147)
.+.|.+. +|+.-.+-+....+-.-.+.++++|+-|-|.....+..+.+..+..+.+. .||++
T Consensus 11 heaWNEA--TNVYlivilvS~~l~~YarrNKrkImRifs~ppt~~~~~epnfyd~~~ki-RLRQQ 72 (99)
T PF15117_consen 11 HEAWNEA--TNVYLIVILVSFGLFMYARRNKRKIMRIFSVPPTAETLTEPNFYDSMSKI-RLRQQ 72 (99)
T ss_pred HHHHhhh--ccEEeehhHHhhHHHHhhhhcCceEEEEEecCCCCCCCCCCcHHHHHHHH-HHHHH
Confidence 4556664 45443333333333333344457888888776665666666677777664 56654
No 343
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=65.99 E-value=31 Score=21.73 Aligned_cols=63 Identities=6% Similarity=-0.103 Sum_probs=39.1
Q ss_pred cccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEe-cCCCHHHHHHHHHHHHhh-cCCccEE
Q 040927 3 RSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLL-DVTDPASVDSLVHFVSSQ-FGKLDIL 67 (147)
Q Consensus 3 ~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~-D~~~~~~~~~~~~~~~~~-~g~id~l 67 (147)
..|...|++|+-.+.+.. .+++.+.+.+... ++..+.+ .-+....+.++++.+.+. ...+.++
T Consensus 25 ~~lr~~G~eVi~LG~~vp-~e~i~~~a~~~~~-d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~~i~ 89 (137)
T PRK02261 25 RALTEAGFEVINLGVMTS-QEEFIDAAIETDA-DAILVSSLYGHGEIDCRGLREKCIEAGLGDILLY 89 (137)
T ss_pred HHHHHCCCEEEECCCCCC-HHHHHHHHHHcCC-CEEEEcCccccCHHHHHHHHHHHHhcCCCCCeEE
Confidence 346678999988887642 3455555555544 4555554 445667888888888776 2344433
No 344
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=65.98 E-value=7.6 Score=26.78 Aligned_cols=45 Identities=11% Similarity=-0.110 Sum_probs=29.0
Q ss_pred cccccCCcEEEEeecChhhHHHHHHHHHh------------cCCCceEEEEecCCCH
Q 040927 3 RSNQVHYSMGEATTKDEKRGLAAVEKLKN------------SGCDNVIFHLLDVTDP 47 (147)
Q Consensus 3 ~~l~~~G~~v~l~~r~~~~~~~~~~~l~~------------~~~~~~~~~~~D~~~~ 47 (147)
..|+.+|++|+.++-++...++..++... ..+.++.++.+|+-+.
T Consensus 59 ~~LA~~G~~V~GvDlS~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~gD~f~l 115 (226)
T PRK13256 59 LFFLSKGVKVIGIELSEKAVLSFFSQNTINYEVIHGNDYKLYKGDDIEIYVADIFNL 115 (226)
T ss_pred HHHHhCCCcEEEEecCHHHHHHHHHHcCCCcceecccccceeccCceEEEEccCcCC
Confidence 35778888888888887777766553210 1122577777888764
No 345
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=65.22 E-value=24 Score=27.43 Aligned_cols=27 Identities=7% Similarity=-0.149 Sum_probs=21.7
Q ss_pred CccccccCCcEEEEeecChhhHHHHHH
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVE 27 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~ 27 (147)
|++.|+++|++|.+.+|+.++.+++.+
T Consensus 21 mA~nL~~~G~~V~V~NRt~~k~~~l~~ 47 (493)
T PLN02350 21 LALNIAEKGFPISVYNRTTSKVDETVE 47 (493)
T ss_pred HHHHHHhCCCeEEEECCCHHHHHHHHH
Confidence 466788999999999999887776654
No 346
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=64.61 E-value=4.8 Score=26.56 Aligned_cols=29 Identities=3% Similarity=-0.224 Sum_probs=21.2
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHH
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLK 30 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~ 30 (147)
+..++..|++|.+.+++.+.+++..+.++
T Consensus 15 A~~~a~~G~~V~l~d~~~~~l~~~~~~i~ 43 (180)
T PF02737_consen 15 AALFARAGYEVTLYDRSPEALERARKRIE 43 (180)
T ss_dssp HHHHHHTTSEEEEE-SSHHHHHHHHHHHH
T ss_pred HHHHHhCCCcEEEEECChHHHHhhhhHHH
Confidence 34567889999999999887776665554
No 347
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=64.16 E-value=28 Score=26.89 Aligned_cols=67 Identities=13% Similarity=0.037 Sum_probs=38.9
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHHHHhcCC---------------CceEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGC---------------DNVIFHLLDVTDPASVDSLVHFVSSQFGKLD 65 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~---------------~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 65 (147)
|++.|+++|++|.+.+|+.++.+++.+.....+. .+...+..=+.+.+.++.+++.+.....+=|
T Consensus 16 lA~nL~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~i~~~~s~~e~v~~l~~~d~Iil~v~~~~~v~~vi~~l~~~L~~g~ 95 (470)
T PTZ00142 16 LALNIASRGFKISVYNRTYEKTEEFVKKAKEGNTRVKGYHTLEELVNSLKKPRKVILLIKAGEAVDETIDNLLPLLEKGD 95 (470)
T ss_pred HHHHHHHCCCeEEEEeCCHHHHHHHHHhhhhcCCcceecCCHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHhhCCCCC
Confidence 4667889999999999998887766553211110 0012222334556667777766655443334
Q ss_pred EE
Q 040927 66 IL 67 (147)
Q Consensus 66 ~l 67 (147)
++
T Consensus 96 iI 97 (470)
T PTZ00142 96 II 97 (470)
T ss_pred EE
Confidence 44
No 348
>PF12683 DUF3798: Protein of unknown function (DUF3798); InterPro: IPR024258 This entry represents functionally uncharacterised proteins that are found in bacteria. They are typically between 247 and 417 amino acids in length. Most of the proteins in this entry have an N-terminal lipoprotein attachment site. These proteins have distant similarity to periplasmic ligand binding families suggesting that this family has a similar role.; PDB: 3QI7_A.
Probab=64.01 E-value=51 Score=23.56 Aligned_cols=93 Identities=12% Similarity=0.076 Sum_probs=47.3
Q ss_pred hhhHHHHHHHHHhcC-CCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE--ecCCCcchhhhcccHHHHHHhHHHhhhh
Q 040927 19 EKRGLAAVEKLKNSG-CDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--GGLPDNWYKMLTQTYELAEKCIQTNYYG 95 (147)
Q Consensus 19 ~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l--ag~~~~~~~~~~~~~~~~~~~~~~n~~~ 95 (147)
....+.++..+.... .+.+..+.+.=..+ ....++++++++ ++|++ +|.... ++..+.+..++.+..
T Consensus 44 ~~e~EttIskI~~lAdDp~mKaIVv~q~vp-Gt~~af~kIkek--RpDIl~ia~~~~E-------Dp~~i~~~aDi~~~~ 113 (275)
T PF12683_consen 44 MSEQETTISKIVSLADDPDMKAIVVSQAVP-GTAEAFRKIKEK--RPDILLIAGEPHE-------DPEVISSAADIVVNP 113 (275)
T ss_dssp GGCHHHHHHHHHGGGG-TTEEEEEEE-SS----HHHHHHHHHH---TTSEEEESS--S--------HHHHHHHSSEEEE-
T ss_pred cchHHHHHHHHHHhccCCCccEEEEeCCCc-chHHHHHHHHhc--CCCeEEEcCCCcC-------CHHHHhhccCeEecc
Confidence 455777777776632 22456555554443 567778999988 88888 776633 456666666665554
Q ss_pred HHHHHHHHHHhhcc-CCCCeEEEEcCC
Q 040927 96 NKRMCEALIPLLQL-SDSPRIVNASSS 121 (147)
Q Consensus 96 ~~~l~~~~~~~l~~-~~~~~iv~isS~ 121 (147)
-...---.++.+.+ -+...+|++|.-
T Consensus 114 D~~~~G~~i~~~Ak~mGAktFVh~sfp 140 (275)
T PF12683_consen 114 DEISRGYTIVWAAKKMGAKTFVHYSFP 140 (275)
T ss_dssp -HHHHHHHHHHHHHHTT-S-EEEEEET
T ss_pred chhhccHHHHHHHHHcCCceEEEEech
Confidence 33322222222221 133568888753
No 349
>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis]
Probab=63.97 E-value=12 Score=25.25 Aligned_cols=42 Identities=19% Similarity=-0.012 Sum_probs=30.9
Q ss_pred ccCCc-EEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHH
Q 040927 6 QVHYS-MGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPA 48 (147)
Q Consensus 6 ~~~G~-~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~ 48 (147)
+..|+ +|+.+..+.+.++-..+...+..+ ++.++.+|+++..
T Consensus 64 ~~lGa~~V~~vdiD~~a~ei~r~N~~~l~g-~v~f~~~dv~~~~ 106 (198)
T COG2263 64 ALLGASRVLAVDIDPEALEIARANAEELLG-DVEFVVADVSDFR 106 (198)
T ss_pred HhcCCcEEEEEecCHHHHHHHHHHHHhhCC-ceEEEEcchhhcC
Confidence 34564 488899999888877777666444 6999999988654
No 350
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=63.83 E-value=27 Score=23.79 Aligned_cols=62 Identities=10% Similarity=-0.180 Sum_probs=35.4
Q ss_pred ccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEe-cCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 4 SNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLL-DVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 4 ~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~-D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
.|...|++|+-.+.+.. .+++.+.+.+..+ ++..+.+ .-+....+.++++.+.+....+.++
T Consensus 111 ~l~~~G~~Vi~LG~~vp-~e~~v~~~~~~~~-~~V~lS~~~~~~~~~~~~~i~~L~~~~~~~~i~ 173 (213)
T cd02069 111 ILSNNGYEVIDLGVMVP-IEKILEAAKEHKA-DIIGLSGLLVPSLDEMVEVAEEMNRRGIKIPLL 173 (213)
T ss_pred HHHhCCCEEEECCCCCC-HHHHHHHHHHcCC-CEEEEccchhccHHHHHHHHHHHHhcCCCCeEE
Confidence 34567888777776542 3445555554443 3444443 3455677777777777663344444
No 351
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=62.62 E-value=44 Score=22.39 Aligned_cols=55 Identities=11% Similarity=-0.119 Sum_probs=32.4
Q ss_pred ccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEe-cCCCHHHHHHHHHHHHhh
Q 040927 4 SNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLL-DVTDPASVDSLVHFVSSQ 60 (147)
Q Consensus 4 ~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~-D~~~~~~~~~~~~~~~~~ 60 (147)
.|...|++|+-.+.+.. .+++.+.+.+..+ ++..+.+ -.++...+.++++.+++.
T Consensus 107 ~l~~~G~~vi~LG~~vp-~e~~v~~~~~~~p-d~v~lS~~~~~~~~~~~~~i~~l~~~ 162 (197)
T TIGR02370 107 MLRANGFDVIDLGRDVP-IDTVVEKVKKEKP-LMLTGSALMTTTMYGQKDINDKLKEE 162 (197)
T ss_pred HHHhCCcEEEECCCCCC-HHHHHHHHHHcCC-CEEEEccccccCHHHHHHHHHHHHHc
Confidence 34566888777776642 3555555655554 3544443 344456677777777666
No 352
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=62.24 E-value=76 Score=24.98 Aligned_cols=18 Identities=6% Similarity=-0.195 Sum_probs=12.9
Q ss_pred ccCCcEEEEeecChhhHH
Q 040927 6 QVHYSMGEATTKDEKRGL 23 (147)
Q Consensus 6 ~~~G~~v~l~~r~~~~~~ 23 (147)
...|+.|++++++.+.++
T Consensus 184 k~lGA~V~v~d~~~~rle 201 (511)
T TIGR00561 184 NSLGAIVRAFDTRPEVKE 201 (511)
T ss_pred HHCCCEEEEEeCCHHHHH
Confidence 456888888888876544
No 353
>TIGR03439 methyl_EasF probable methyltransferase domain, EasF family. This model represents an uncharacterized domain of about 300 amino acids with homology to S-adenosylmethionine-dependent methyltransferases. Proteins with this domain are exclusively fungal. A few, such as EasF from Neotyphodium lolii, are associated with the biosynthesis of ergot alkaloids, a class of fungal secondary metabolites. EasF may, in fact, be the AdoMet:dimethylallyltryptophan N-methyltransferase, the enzyme that follows tryptophan dimethylallyltransferase (DMATS) in ergot alkaloid biosynthesis. Several other members of this family, including mug158 (meiotically up-regulated gene 158 protein) from Schizosaccharomyces pombe, contain an additional uncharacterized domain DUF323 (pfam03781).
Probab=61.80 E-value=34 Score=24.97 Aligned_cols=56 Identities=16% Similarity=0.145 Sum_probs=37.3
Q ss_pred CcEEEEe-ecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHH-hhcCCccE
Q 040927 9 YSMGEAT-TKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVS-SQFGKLDI 66 (147)
Q Consensus 9 G~~v~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~~g~id~ 66 (147)
|..++=. +.+..+..-+.+.+...+. .+.++++|++. +.+....+.+. +.++.+.+
T Consensus 77 ~~~lIELGsG~~~Kt~~LL~aL~~~~~-~~~Y~plDIS~-~~L~~a~~~L~~~~~p~l~v 134 (319)
T TIGR03439 77 GSMLVELGSGNLRKVGILLEALERQKK-SVDYYALDVSR-SELQRTLAELPLGNFSHVRC 134 (319)
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCC-CceEEEEECCH-HHHHHHHHhhhhccCCCeEE
Confidence 4443333 3455666677777765544 47899999985 56888888887 66666655
No 354
>PF12241 Enoyl_reductase: Trans-2-enoyl-CoA reductase catalytic region; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=61.56 E-value=49 Score=23.00 Aligned_cols=39 Identities=15% Similarity=0.270 Sum_probs=29.6
Q ss_pred HHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 28 KLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 28 ~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
..++.|- ....+..|.-+.+--++.++.+++.+|.+|.+
T Consensus 17 ~A~~~Gl-~a~~ingDAFS~e~K~~vI~~Ik~~~G~vDLv 55 (237)
T PF12241_consen 17 AAEAAGL-YAKSINGDAFSDEMKEQVIELIKEDFGKVDLV 55 (237)
T ss_dssp HHHHTT---EEEEES-TTSHHHHHHHHHHHHHHTS-EEEE
T ss_pred HHHHCCC-eeeecccccCCHHHHHHHHHHHHHhcCCccEE
Confidence 3344453 47788999999999999999999999999998
No 355
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=61.37 E-value=4.8 Score=27.05 Aligned_cols=28 Identities=11% Similarity=-0.137 Sum_probs=20.8
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHH
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKL 29 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l 29 (147)
++.|.+.|++|++.+++.+.+++..+.+
T Consensus 44 A~~L~~~G~~Vvv~D~~~~~~~~~~~~~ 71 (200)
T cd01075 44 AEHLLEEGAKLIVADINEEAVARAAELF 71 (200)
T ss_pred HHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence 5677888999888888877766665543
No 356
>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein. This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.
Probab=60.10 E-value=37 Score=25.00 Aligned_cols=58 Identities=10% Similarity=-0.043 Sum_probs=32.9
Q ss_pred CccccccCCcEEEEeecChhhHH-HHHHHHHhcCC----------CceEEEEecCCCHHHHHHHHHHHH
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGL-AAVEKLKNSGC----------DNVIFHLLDVTDPASVDSLVHFVS 58 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~-~~~~~l~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~~ 58 (147)
||+.|++.|+.|.+.+|+.+..+ +..+.+...|. ....++..=+.+.+.++.++..+.
T Consensus 35 MArnLlkAGheV~V~Drnrsa~e~e~~e~LaeaGA~~AaS~aEAAa~ADVVIL~LPd~aaV~eVl~GLa 103 (341)
T TIGR01724 35 MAIEFAMAGHDVVLAEPNREFMSDDLWKKVEDAGVKVVSDDKEAAKHGEIHVLFTPFGKGTFSIARTII 103 (341)
T ss_pred HHHHHHHCCCEEEEEeCChhhhhhhhhHHHHHCCCeecCCHHHHHhCCCEEEEecCCHHHHHHHHHHHH
Confidence 46778899999999998876442 12222222221 023334444556677766654443
No 357
>PF04309 G3P_antiterm: Glycerol-3-phosphate responsive antiterminator; InterPro: IPR006699 Glycerol enters bacterial cells via facilitated diffusion, an energy-independent transport process catalysed by the glycerol transport facilitator GlpF, an integral membrane protein of the aquaporin family. Intracellular glycerol is usually converted to glycerol-3-P in an ATP-requiring phosphorylation reaction catalysed by glycerol kinase (GlpK). Glycerol-3-P, the inducer of the glpFK operon, is not a substrate for GlpF and hence remains entrapped in the cell where it is metabolized further. In some bacterial species, for example Bacillus firmus, glycerol-3-P activates the antiterminator GlpP []. In B. subtilis, glpF and glpK are organised in an operon followed by the glycerol-3-P dehydrogenase-encoding glpD gene and preceded by glpP coding for an antiterminator regulating the expression of glpFK, glpD and glpTQ. Their induction requires the inducer glycerol-3-P, which activates the antiterminator GlpP by allowing it to bind to the leader region of glpD and presumably also of glpFK and glpTQ mRNAs.; GO: 0006355 regulation of transcription, DNA-dependent, 0009607 response to biotic stimulus; PDB: 1VKF_A 3KTS_G.
Probab=59.13 E-value=23 Score=23.48 Aligned_cols=56 Identities=23% Similarity=0.190 Sum_probs=34.7
Q ss_pred cEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 10 SMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 10 ~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
-.|++...+-..+.++.+.++..+ +..+++.|+-+-=+-++..=+...+.+++|++
T Consensus 21 ~~vfLl~g~I~~l~~~v~~~~~~g--K~vfVHiDli~Gl~~D~~~i~~L~~~~~~dGI 76 (175)
T PF04309_consen 21 EVVFLLTGDIGNLKDIVKRLKAAG--KKVFVHIDLIEGLSRDEAGIEYLKEYGKPDGI 76 (175)
T ss_dssp SEEEE-SEECCCHHHHHHHHHHTT---EEEEECCGEETB-SSHHHHHHHHHTT--SEE
T ss_pred CEEEEEcCcHHHHHHHHHHHHHcC--CEEEEEehhcCCCCCCHHHHHHHHHcCCCcEE
Confidence 347777778788999999998887 57888888755322223333334445788988
No 358
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=58.79 E-value=60 Score=24.01 Aligned_cols=58 Identities=7% Similarity=-0.028 Sum_probs=35.6
Q ss_pred CcEEEEeecChh-hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 040927 9 YSMGEATTKDEK-RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDI 66 (147)
Q Consensus 9 G~~v~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 66 (147)
...|++..+|++ .++++.+.+..+.-++.+++.+|-++.+...++++++.++++.+++
T Consensus 42 ~VSViiP~~nee~~l~~~L~Sl~~q~Yp~~EIivvdd~s~D~t~~iv~~~~~~~p~~~i 100 (373)
T TIGR03472 42 PVSVLKPLHGDEPELYENLASFCRQDYPGFQMLFGVQDPDDPALAVVRRLRADFPDADI 100 (373)
T ss_pred CeEEEEECCCCChhHHHHHHHHHhcCCCCeEEEEEeCCCCCcHHHHHHHHHHhCCCCce
Confidence 356788888764 4667777775543224666555544445555677887777665443
No 359
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=58.47 E-value=39 Score=20.70 Aligned_cols=56 Identities=7% Similarity=-0.002 Sum_probs=35.7
Q ss_pred EEEeecC-hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 12 GEATTKD-EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 12 v~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
|++...+ .+.+.++++.+.........++.+|=.+.+...+.+++..+...++.++
T Consensus 2 vvip~~n~~~~l~~~l~sl~~q~~~~~eiivvdd~s~d~~~~~~~~~~~~~~~i~~i 58 (169)
T PF00535_consen 2 VVIPTYNEAEYLERTLESLLKQTDPDFEIIVVDDGSTDETEEILEEYAESDPNIRYI 58 (169)
T ss_dssp EEEEESS-TTTHHHHHHHHHHHSGCEEEEEEEECS-SSSHHHHHHHHHCCSTTEEEE
T ss_pred EEEEeeCCHHHHHHHHHHHhhccCCCEEEEEeccccccccccccccccccccccccc
Confidence 4555554 4678888888877633356777776666677777777776533455555
No 360
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=57.92 E-value=8.8 Score=27.35 Aligned_cols=27 Identities=7% Similarity=-0.191 Sum_probs=21.1
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHH
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEK 28 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~ 28 (147)
+..++..|+.|++.+++.+.+++..+.
T Consensus 21 A~~~a~~G~~V~l~d~~~~~~~~~~~~ 47 (286)
T PRK07819 21 AEVCARAGVDVLVFETTEELATAGRNR 47 (286)
T ss_pred HHHHHhCCCEEEEEECCHHHHHHHHHH
Confidence 456788999999999998877664443
No 361
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=57.60 E-value=27 Score=25.39 Aligned_cols=31 Identities=32% Similarity=0.250 Sum_probs=22.0
Q ss_pred HhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927 87 KCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSM 122 (147)
Q Consensus 87 ~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~ 122 (147)
+++-+|..++.+++..+.... .+++..|+..
T Consensus 113 ktIktN~igtln~lglakrv~-----aR~l~aSTse 143 (350)
T KOG1429|consen 113 KTIKTNVIGTLNMLGLAKRVG-----ARFLLASTSE 143 (350)
T ss_pred ceeeecchhhHHHHHHHHHhC-----ceEEEeeccc
Confidence 457789999999888876543 5677666543
No 362
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=57.49 E-value=8.9 Score=26.99 Aligned_cols=29 Identities=3% Similarity=-0.103 Sum_probs=20.5
Q ss_pred cccccCCcEEEEeecChhhHHHHHHHHHh
Q 040927 3 RSNQVHYSMGEATTKDEKRGLAAVEKLKN 31 (147)
Q Consensus 3 ~~l~~~G~~v~l~~r~~~~~~~~~~~l~~ 31 (147)
..|++.|++|.+++|+.++.+++.+++..
T Consensus 134 ~~L~~~g~~v~v~~R~~~~~~~la~~~~~ 162 (270)
T TIGR00507 134 LPLLKADCNVIIANRTVSKAEELAERFQR 162 (270)
T ss_pred HHHHHCCCEEEEEeCCHHHHHHHHHHHhh
Confidence 44566777888888887777777666644
No 363
>PF00478 IMPDH: IMP dehydrogenase / GMP reductase domain; InterPro: IPR001093 Synonym(s): Inosine-5'-monophosphate dehydrogenase, Inosinic acid dehydrogenase; Synonym(s): Guanosine 5'-monophosphate oxidoreductase This entry contains two related enzymes IMP dehydrogenase and GMP reducatase. These enzymes adopt a TIM barrel structure. IMP dehydrogenase (1.1.1.205 from EC) (IMPDH) catalyzes the rate-limiting reaction of de novo GTP biosynthesis, the NAD-dependent reduction of IMP into XMP []. Inosine 5-phosphate + NAD+ + H2O = xanthosine 5-phosphate + NADH IMP dehydrogenase is associated with cell proliferation and is a possible target for cancer chemotherapy. Mammalian and bacterial IMPDHs are tetramers of identical chains. There are two IMP dehydrogenase isozymes in humans []. IMP dehydrogenase nearly always contains a long insertion that has two CBS domains within it. GMP reductase (1.7.1.7 from EC) catalyzes the irreversible and NADPH-dependent reductive deamination of GMP into IMP []. NADPH + guanosine 5-phosphate = NADP+ + inosine 5-phosphate + NH3 It converts nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and maintains intracellular balance of A and G nucleotides.; GO: 0003824 catalytic activity, 0055114 oxidation-reduction process; PDB: 3FFS_D 1VRD_A 1JCN_B 1EEP_B 3TSB_B 3USB_B 3TSD_A 4FF0_A 4FEZ_A 3KHJ_D ....
Probab=57.27 E-value=33 Score=25.45 Aligned_cols=61 Identities=11% Similarity=-0.007 Sum_probs=33.8
Q ss_pred ccccCCcEEEEeecC---hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE-ecCC
Q 040927 4 SNQVHYSMGEATTKD---EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL-GGLP 71 (147)
Q Consensus 4 ~l~~~G~~v~l~~r~---~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l-ag~~ 71 (147)
.|.+.|.++++++.. .+..-+.++.++...+ ++.++..++...+..+.+++. ..|.+ .|+.
T Consensus 115 ~L~~agvD~ivID~a~g~s~~~~~~ik~ik~~~~-~~~viaGNV~T~e~a~~L~~a------Gad~vkVGiG 179 (352)
T PF00478_consen 115 ALVEAGVDVIVIDSAHGHSEHVIDMIKKIKKKFP-DVPVIAGNVVTYEGAKDLIDA------GADAVKVGIG 179 (352)
T ss_dssp HHHHTT-SEEEEE-SSTTSHHHHHHHHHHHHHST-TSEEEEEEE-SHHHHHHHHHT------T-SEEEESSS
T ss_pred HHHHcCCCEEEccccCccHHHHHHHHHHHHHhCC-CceEEecccCCHHHHHHHHHc------CCCEEEEecc
Confidence 455567777777543 2334445556666554 577777787777776665432 46777 5543
No 364
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=57.04 E-value=14 Score=25.74 Aligned_cols=43 Identities=12% Similarity=-0.099 Sum_probs=28.1
Q ss_pred cccccCCcEEEEeecChhhHHHHHHHHHhcCC-CceEEEEecCC
Q 040927 3 RSNQVHYSMGEATTKDEKRGLAAVEKLKNSGC-DNVIFHLLDVT 45 (147)
Q Consensus 3 ~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~~D~~ 45 (147)
..|++.|++|+.++.+.+.++.+.+.+...+. .++.++.+|+.
T Consensus 60 ~~la~~g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d~~ 103 (255)
T PRK11036 60 IKLAELGHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCAAQ 103 (255)
T ss_pred HHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEcCHH
Confidence 45667788899888888777766666554432 23556655553
No 365
>PF13649 Methyltransf_25: Methyltransferase domain; PDB: 3BXO_B 3GGD_A 3PX2_A 3PX3_A 3PFH_D 3PFG_A 1Y8C_A.
Probab=56.92 E-value=18 Score=20.94 Aligned_cols=47 Identities=21% Similarity=0.150 Sum_probs=35.2
Q ss_pred cEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 10 SMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 10 ~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
.+++.++.+.+.++...+.....+. ++.++..|+.+.. ...++.|++
T Consensus 25 ~~~~gvD~s~~~l~~~~~~~~~~~~-~~~~~~~D~~~l~----------~~~~~~D~v 71 (101)
T PF13649_consen 25 SRVIGVDISPEMLELAKKRFSEDGP-KVRFVQADARDLP----------FSDGKFDLV 71 (101)
T ss_dssp SEEEEEES-HHHHHHHHHHSHHTTT-TSEEEESCTTCHH----------HHSSSEEEE
T ss_pred ceEEEEECCHHHHHHHHHhchhcCC-ceEEEECCHhHCc----------ccCCCeeEE
Confidence 7899999999888887777766655 6899999997732 123588988
No 366
>PF01729 QRPTase_C: Quinolinate phosphoribosyl transferase, C-terminal domain; InterPro: IPR002638 Quinolinate phosphoribosyl transferase (QPRTase) or nicotinate-nucleotide pyrophosphorylase 2.4.2.19 from EC is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to give rise to nicotinic acid mononucleotide (NaMN), pyrophosphate and carbon dioxide [, ]. Unlike IPR004393 from INTERPRO, this domain also includes the molybdenum transport system protein ModD.; GO: 0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity, 0009435 NAD biosynthetic process; PDB: 3C2O_A 3C2F_A 3C2E_A 3C2R_A 3C2V_A 1QPN_E 1QPO_A 1QPQ_F 1QPR_E 2I14_D ....
Probab=56.82 E-value=54 Score=21.53 Aligned_cols=51 Identities=16% Similarity=0.182 Sum_probs=33.7
Q ss_pred EEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE-ec
Q 040927 12 GEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL-GG 69 (147)
Q Consensus 12 v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l-ag 69 (147)
|.+=..+.+++++ .++ . .+..+.+|=.++++++++++.+....+++.+. +|
T Consensus 83 I~VEv~~~ee~~e---a~~-~---g~d~I~lD~~~~~~~~~~v~~l~~~~~~v~ie~SG 134 (169)
T PF01729_consen 83 IEVEVENLEEAEE---ALE-A---GADIIMLDNMSPEDLKEAVEELRELNPRVKIEASG 134 (169)
T ss_dssp EEEEESSHHHHHH---HHH-T---T-SEEEEES-CHHHHHHHHHHHHHHTTTSEEEEES
T ss_pred EEEEcCCHHHHHH---HHH-h---CCCEEEecCcCHHHHHHHHHHHhhcCCcEEEEEEC
Confidence 4444555544443 332 1 37788899999999999999998777777666 55
No 367
>PF13684 Dak1_2: Dihydroxyacetone kinase family
Probab=56.49 E-value=75 Score=23.13 Aligned_cols=60 Identities=13% Similarity=0.114 Sum_probs=41.6
Q ss_pred CCcEEEEeecChh-hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 8 HYSMGEATTKDEK-RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 8 ~G~~v~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
.+-+++.++.+.. .+.++++.+...+.+-++.+.++-.+.+..+.+.+.+.++|+.+++-
T Consensus 237 ~~~~i~~~~~~~~~~~~~ll~~l~~~~~elvTi~~G~~~~~~~a~~l~~~l~~~~p~~eve 297 (313)
T PF13684_consen 237 VDGKIVVVGKDLEEALKKLLEKLLDEDGELVTIYYGEDVSEEEAEALAEFLEEKYPDVEVE 297 (313)
T ss_pred eCCEEEEEcCCHHHHHHHHHHHhhccCCeEEEEEecCCCCHHHHHHHHHHHHHHhCCeEEE
Confidence 3445666676643 45667777755555446667776666678999999999998877765
No 368
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional
Probab=55.51 E-value=84 Score=23.35 Aligned_cols=30 Identities=17% Similarity=0.156 Sum_probs=13.3
Q ss_pred EEEEecCCCH--HHHHHHHHHHHhhcCCccEE
Q 040927 38 IFHLLDVTDP--ASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 38 ~~~~~D~~~~--~~~~~~~~~~~~~~g~id~l 67 (147)
.++..|+++- +.+-++++.+++.++.++++
T Consensus 124 D~iviD~AhGhs~~~i~~ik~ik~~~P~~~vI 155 (346)
T PRK05096 124 NFICIDVANGYSEHFVQFVAKAREAWPDKTIC 155 (346)
T ss_pred CEEEEECCCCcHHHHHHHHHHHHHhCCCCcEE
Confidence 3444444442 33344445555555444443
No 369
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=55.12 E-value=42 Score=20.98 Aligned_cols=56 Identities=5% Similarity=-0.200 Sum_probs=36.0
Q ss_pred cccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEe-cCCCHHHHHHHHHHHHhh
Q 040927 3 RSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLL-DVTDPASVDSLVHFVSSQ 60 (147)
Q Consensus 3 ~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~-D~~~~~~~~~~~~~~~~~ 60 (147)
..|...|+.|+-.+.+.. .++..+...+.+. ++..+.. +-+-.+.+..+++.++++
T Consensus 24 ~~l~~~GfeVi~lg~~~s-~e~~v~aa~e~~a-dii~iSsl~~~~~~~~~~~~~~L~~~ 80 (132)
T TIGR00640 24 TAYADLGFDVDVGPLFQT-PEEIARQAVEADV-HVVGVSSLAGGHLTLVPALRKELDKL 80 (132)
T ss_pred HHHHhCCcEEEECCCCCC-HHHHHHHHHHcCC-CEEEEcCchhhhHHHHHHHHHHHHhc
Confidence 456778999998887643 3445555555554 3444433 545667788888888776
No 370
>PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A ....
Probab=54.90 E-value=51 Score=20.67 Aligned_cols=40 Identities=23% Similarity=0.071 Sum_probs=31.3
Q ss_pred CCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCH
Q 040927 8 HYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDP 47 (147)
Q Consensus 8 ~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~ 47 (147)
.+.+++.++.+++.++...+.++..+-.++.++..|+.+.
T Consensus 27 ~~~~i~gvD~s~~~i~~a~~~~~~~~~~ni~~~~~d~~~l 66 (152)
T PF13847_consen 27 PGAKIIGVDISEEMIEYAKKRAKELGLDNIEFIQGDIEDL 66 (152)
T ss_dssp TTSEEEEEESSHHHHHHHHHHHHHTTSTTEEEEESBTTCG
T ss_pred CCCEEEEEECcHHHHHHhhcccccccccccceEEeehhcc
Confidence 3778999999998888877777666554688998998873
No 371
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=54.73 E-value=81 Score=23.47 Aligned_cols=53 Identities=11% Similarity=0.142 Sum_probs=35.2
Q ss_pred cEEEEeecCh-hhHHHHHHHHHhcC-CCceEEEEecCCCHHHHHHHHHHHHhhcC
Q 040927 10 SMGEATTKDE-KRGLAAVEKLKNSG-CDNVIFHLLDVTDPASVDSLVHFVSSQFG 62 (147)
Q Consensus 10 ~~v~l~~r~~-~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 62 (147)
..|++..+|+ +.+.++++.+.++. +.+.+++.+|=.+.|+..+.+++..++++
T Consensus 42 VSVIIpa~Ne~~~L~~~L~sL~~q~yp~~~eIIVVDd~StD~T~~i~~~~~~~~~ 96 (384)
T TIGR03469 42 VVAVVPARNEADVIGECVTSLLEQDYPGKLHVILVDDHSTDGTADIARAAARAYG 96 (384)
T ss_pred EEEEEecCCcHhHHHHHHHHHHhCCCCCceEEEEEeCCCCCcHHHHHHHHHHhcC
Confidence 4578888875 45777778776542 21467777777666777777777765544
No 372
>COG4982 3-oxoacyl-[acyl-carrier protein]
Probab=54.68 E-value=1.2e+02 Score=24.87 Aligned_cols=57 Identities=12% Similarity=0.049 Sum_probs=41.3
Q ss_pred ccccCCcEEEEeecC-hhhHHHHHHHHHhcC---CCceEEEEecCCCHHHHHHHHHHHHhh
Q 040927 4 SNQVHYSMGEATTKD-EKRGLAAVEKLKNSG---CDNVIFHLLDVTDPASVDSLVHFVSSQ 60 (147)
Q Consensus 4 ~l~~~G~~v~l~~r~-~~~~~~~~~~l~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~ 60 (147)
.|...|++|+++..+ .....+....|.... +....++..+..+..+++.+++.|-.+
T Consensus 416 ~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg~e 476 (866)
T COG4982 416 RLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIGDE 476 (866)
T ss_pred HHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhccc
Confidence 467889999998665 334445556665432 235788999999999999999988553
No 373
>PRK06382 threonine dehydratase; Provisional
Probab=54.33 E-value=62 Score=24.41 Aligned_cols=61 Identities=8% Similarity=-0.006 Sum_probs=37.1
Q ss_pred ccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEec-CCCHHHHHHHHHHHHhhcCCccEE
Q 040927 6 QVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLD-VTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 6 ~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D-~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
...|++|++++.+.+...+...++....+ ...+...| ....+.-..+..++.++.+.+|.+
T Consensus 116 ~~~GA~Vv~~~~~~~~a~~~a~~la~~~~-~~~v~~~~~~~~i~g~~t~~~Ei~eq~~~~d~v 177 (406)
T PRK06382 116 EAYGAHVILTGRDYDEAHRYADKIAMDEN-RTFIEAFNDRWVISGQGTIGLEIMEDLPDLDQI 177 (406)
T ss_pred HHcCCEEEEECCCHHHHHHHHHHHHHhcC-CEecCccCChHHHHHHHHHHHHHHHhcCCCCEE
Confidence 35689999888765555555666654433 23333332 223334455677788888888888
No 374
>PLN02970 serine racemase
Probab=53.65 E-value=59 Score=23.67 Aligned_cols=62 Identities=11% Similarity=0.019 Sum_probs=33.7
Q ss_pred cccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEe-cCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 5 NQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLL-DVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 5 l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~-D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
+...|++|+.+..+.+...+...++....+ ....... +....+....+..++.++...+|.+
T Consensus 117 ~~~~GA~Vi~~~~~~~~~~~~a~~la~~~g-~~~~~~~~n~~~~~g~~t~g~Ei~~ql~~~D~v 179 (328)
T PLN02970 117 VIRYGGIITWCEPTVESREAVAARVQQETG-AVLIHPYNDGRVISGQGTIALEFLEQVPELDVI 179 (328)
T ss_pred HHhcCCEEEEeCCCHHHHHHHHHHHHHhcC-CEEeCCCCCcchhhehHHHHHHHHHhccCCCEE
Confidence 345588888887665555555555544322 1222222 2222333445566777776667877
No 375
>COG1570 XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair]
Probab=53.61 E-value=1e+02 Score=23.77 Aligned_cols=72 Identities=14% Similarity=0.048 Sum_probs=44.3
Q ss_pred EEeecChhhHHHHHHHHHhcCC-CceEEEEecCCCHHHHHHHHHHHHhh--cCCccEE-ec-CCCcchhhhcccHHH
Q 040927 13 EATTKDEKRGLAAVEKLKNSGC-DNVIFHLLDVTDPASVDSLVHFVSSQ--FGKLDIL-GG-LPDNWYKMLTQTYEL 84 (147)
Q Consensus 13 ~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~--~g~id~l-ag-~~~~~~~~~~~~~~~ 84 (147)
++++++.....++...+..+.+ ..+.++++-+.-.....++++.+... .+.+|++ .| ..+....++..+.|.
T Consensus 140 VITS~tgAairDIl~~~~rR~P~~~viv~pt~VQG~~A~~eIv~aI~~an~~~~~DvlIVaRGGGSiEDLW~FNdE~ 216 (440)
T COG1570 140 VITSPTGAALRDILHTLSRRFPSVEVIVYPTLVQGEGAAEEIVEAIERANQRGDVDVLIVARGGGSIEDLWAFNDEI 216 (440)
T ss_pred EEcCCchHHHHHHHHHHHhhCCCCeEEEEeccccCCCcHHHHHHHHHHhhccCCCCEEEEecCcchHHHHhccChHH
Confidence 6678888888888888887654 34666666555555555555555432 3679998 32 222334555555554
No 376
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=52.52 E-value=66 Score=23.02 Aligned_cols=27 Identities=15% Similarity=-0.076 Sum_probs=20.2
Q ss_pred CccccccCCcEEEEeecChhhHHHHHH
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVE 27 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~ 27 (147)
|++.|.+.|++|.+.+|+.++.+++.+
T Consensus 15 la~~L~~~g~~V~~~dr~~~~~~~l~~ 41 (298)
T TIGR00872 15 IVRRLAKRGHDCVGYDHDQDAVKAMKE 41 (298)
T ss_pred HHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 356677889999999998877665543
No 377
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating. This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.
Probab=52.35 E-value=42 Score=25.93 Aligned_cols=28 Identities=4% Similarity=-0.096 Sum_probs=21.8
Q ss_pred CccccccCCcEEEEeecChhhHHHHHHH
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAVEK 28 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~~~ 28 (147)
|++.|+++|++|++.+|+.++.+++.++
T Consensus 14 mA~nL~~~G~~V~v~drt~~~~~~l~~~ 41 (467)
T TIGR00873 14 LALNMADHGFTVSVYNRTPEKTDEFLAE 41 (467)
T ss_pred HHHHHHhcCCeEEEEeCCHHHHHHHHhh
Confidence 4567888999999999998877766543
No 378
>PRK06843 inosine 5-monophosphate dehydrogenase; Validated
Probab=52.35 E-value=39 Score=25.63 Aligned_cols=59 Identities=15% Similarity=0.016 Sum_probs=32.7
Q ss_pred ccccCCcEEEEeecC---hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE-ec
Q 040927 4 SNQVHYSMGEATTKD---EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL-GG 69 (147)
Q Consensus 4 ~l~~~G~~v~l~~r~---~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l-ag 69 (147)
.|.+.|+++++++.. .....+++++++...+ +..++..|+.+.+....+.+- ..|++ .|
T Consensus 160 ~lv~aGvDvI~iD~a~g~~~~~~~~v~~ik~~~p-~~~vi~g~V~T~e~a~~l~~a------GaD~I~vG 222 (404)
T PRK06843 160 ELVKAHVDILVIDSAHGHSTRIIELVKKIKTKYP-NLDLIAGNIVTKEAALDLISV------GADCLKVG 222 (404)
T ss_pred HHHhcCCCEEEEECCCCCChhHHHHHHHHHhhCC-CCcEEEEecCCHHHHHHHHHc------CCCEEEEC
Confidence 455667776665432 2344455566655543 355566677776666555432 46666 44
No 379
>PRK11933 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed
Probab=52.31 E-value=1.1e+02 Score=23.79 Aligned_cols=36 Identities=17% Similarity=0.077 Sum_probs=27.4
Q ss_pred EEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCC
Q 040927 11 MGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTD 46 (147)
Q Consensus 11 ~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~ 46 (147)
.|+..+.+...++.+.+.++..|..++.+...|..+
T Consensus 140 ~lvA~D~~~~R~~~L~~nl~r~G~~nv~v~~~D~~~ 175 (470)
T PRK11933 140 AIVANEYSASRVKVLHANISRCGVSNVALTHFDGRV 175 (470)
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCchhh
Confidence 688888998888888888887775556666667554
No 380
>COG0362 Gnd 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]
Probab=52.01 E-value=50 Score=25.19 Aligned_cols=27 Identities=4% Similarity=-0.128 Sum_probs=21.4
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHH
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEK 28 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~ 28 (147)
+.-++.+|++|.+..|+.++.++..++
T Consensus 19 aLNi~~~G~~VavyNRt~~ktd~f~~~ 45 (473)
T COG0362 19 ALNIADHGYTVAVYNRTTEKTDEFLAE 45 (473)
T ss_pred HHHHHhcCceEEEEeCCHHHHHHHHHh
Confidence 445678999999999998887776554
No 381
>COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis [Cell envelope biogenesis, outer membrane]
Probab=50.79 E-value=60 Score=23.68 Aligned_cols=52 Identities=19% Similarity=0.142 Sum_probs=36.1
Q ss_pred cEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 10 SMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 10 ~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
.+++..+|+...++...+.+...++ ++.++...+++.... ..... .+.+|++
T Consensus 49 ~~li~~DrD~~Ai~~a~~~l~~~~~-r~~~v~~~F~~l~~~---l~~~~--i~~vDGi 100 (314)
T COG0275 49 GRLIGIDRDPQAIAIAKERLKEFDG-RVTLVHGNFANLAEA---LKELG--IGKVDGI 100 (314)
T ss_pred CeEEEEcCCHHHHHHHHHHhhccCC-cEEEEeCcHHHHHHH---HHhcC--CCceeEE
Confidence 5689999999888887777777664 799988776554332 22221 3578887
No 382
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=50.25 E-value=23 Score=23.52 Aligned_cols=26 Identities=4% Similarity=-0.233 Sum_probs=15.4
Q ss_pred ccccCCcEEEEeecChhhHHHHHHHH
Q 040927 4 SNQVHYSMGEATTKDEKRGLAAVEKL 29 (147)
Q Consensus 4 ~l~~~G~~v~l~~r~~~~~~~~~~~l 29 (147)
.++++|++|+.++.+...++.+.+..
T Consensus 47 ~la~~g~~V~~iD~s~~~l~~a~~~~ 72 (195)
T TIGR00477 47 YLSLAGYDVRAWDHNPASIASVLDMK 72 (195)
T ss_pred HHHHCCCeEEEEECCHHHHHHHHHHH
Confidence 45566777777777765555444433
No 383
>PLN02274 inosine-5'-monophosphate dehydrogenase
Probab=50.08 E-value=28 Score=27.17 Aligned_cols=50 Identities=8% Similarity=-0.109 Sum_probs=26.3
Q ss_pred ccccCCcEEEEeecChhh---HHHHHHHHHhcCCCceEEEEecCCCHHHHHHHH
Q 040927 4 SNQVHYSMGEATTKDEKR---GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLV 54 (147)
Q Consensus 4 ~l~~~G~~v~l~~r~~~~---~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~ 54 (147)
.|.+.|+++++++....+ ..+++++++...+ ...++..|+...++...+.
T Consensus 255 ~l~~ag~d~i~iD~~~g~~~~~~~~i~~ik~~~p-~~~vi~g~v~t~e~a~~a~ 307 (505)
T PLN02274 255 HLVKAGVDVVVLDSSQGDSIYQLEMIKYIKKTYP-ELDVIGGNVVTMYQAQNLI 307 (505)
T ss_pred HHHHcCCCEEEEeCCCCCcHHHHHHHHHHHHhCC-CCcEEEecCCCHHHHHHHH
Confidence 455566666666554322 1245555555443 3555556666666655544
No 384
>KOG2550 consensus IMP dehydrogenase/GMP reductase [Nucleotide transport and metabolism]
Probab=49.88 E-value=58 Score=24.91 Aligned_cols=56 Identities=11% Similarity=-0.062 Sum_probs=34.1
Q ss_pred cccCCcEEEEeecCh---hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 5 NQVHYSMGEATTKDE---KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 5 l~~~G~~v~l~~r~~---~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
|.+.|.+|++++.+. .-.-+.++.+++..+ ...++..++-..++.++++.. ..|++
T Consensus 259 l~~aGvdvviLDSSqGnS~~qiemik~iK~~yP-~l~ViaGNVVT~~qa~nLI~a------GaDgL 317 (503)
T KOG2550|consen 259 LVQAGVDVVILDSSQGNSIYQLEMIKYIKETYP-DLQIIAGNVVTKEQAANLIAA------GADGL 317 (503)
T ss_pred hhhcCCcEEEEecCCCcchhHHHHHHHHHhhCC-CceeeccceeeHHHHHHHHHc------cCcee
Confidence 456677777776543 223445666666665 467777777666666666543 56666
No 385
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=49.79 E-value=10 Score=27.87 Aligned_cols=28 Identities=11% Similarity=-0.031 Sum_probs=22.1
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHH
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKL 29 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l 29 (147)
.++|.++|++|+++.|+.+...++.+..
T Consensus 20 I~eL~~~GheV~it~R~~~~~~~LL~~y 47 (335)
T PF04007_consen 20 IRELEKRGHEVLITARDKDETEELLDLY 47 (335)
T ss_pred HHHHHhCCCEEEEEEeccchHHHHHHHc
Confidence 3567889999999999988777665543
No 386
>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form. A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.
Probab=49.45 E-value=55 Score=24.31 Aligned_cols=62 Identities=13% Similarity=0.025 Sum_probs=35.1
Q ss_pred cccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEec-CCCHHHHHHHHHHHHhhcCCccEE
Q 040927 5 NQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLD-VTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 5 l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D-~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
+...|++|++++.+.+...+...++....+ .......| -...+.-.....++.++.+.+|.+
T Consensus 90 ~~~~GA~V~~~~~~~~~a~~~a~~~~~~~~-~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~D~v 152 (380)
T TIGR01127 90 TKSYGAEVILHGDDYDEAYAFATSLAEEEG-RVFVHPFDDEFVMAGQGTIGLEIMEDIPDVDTV 152 (380)
T ss_pred HHHCCCEEEEECCCHHHHHHHHHHHHHhcC-CEecCCCCChhhhhhhHHHHHHHHHhCCCCCEE
Confidence 445699999988765555555555544432 12222221 112233345566777777788888
No 387
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=49.24 E-value=1.1e+02 Score=23.62 Aligned_cols=66 Identities=12% Similarity=0.070 Sum_probs=33.0
Q ss_pred CccccccCCcEEEEeecChh---hHHHHHHHHHhcCCCceEEEEe-cCCCHHHH-HHHHHHHHhhcCCccEE----ecCC
Q 040927 1 MKRSNQVHYSMGEATTKDEK---RGLAAVEKLKNSGCDNVIFHLL-DVTDPASV-DSLVHFVSSQFGKLDIL----GGLP 71 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~---~~~~~~~~l~~~~~~~~~~~~~-D~~~~~~~-~~~~~~~~~~~g~id~l----ag~~ 71 (147)
||++|.++|.+|.+++.+.. ..+++ +.+...- .+.++.- +-.||.++ ++.++.+++. ..|++ ||..
T Consensus 120 LA~~lkk~~~kvllVaaD~~RpAA~eQL-~~La~q~--~v~~f~~~~~~~Pv~Iak~al~~ak~~--~~DvvIvDTAGRl 194 (451)
T COG0541 120 LAKYLKKKGKKVLLVAADTYRPAAIEQL-KQLAEQV--GVPFFGSGTEKDPVEIAKAALEKAKEE--GYDVVIVDTAGRL 194 (451)
T ss_pred HHHHHHHcCCceEEEecccCChHHHHHH-HHHHHHc--CCceecCCCCCCHHHHHHHHHHHHHHc--CCCEEEEeCCCcc
Confidence 35667778888887765532 22222 2222221 2444443 23345444 4555555554 45665 7754
No 388
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=49.16 E-value=62 Score=21.48 Aligned_cols=54 Identities=24% Similarity=0.130 Sum_probs=36.7
Q ss_pred EEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 12 GEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 12 v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
|++...+--.+.+..+.+++.+ +..+++.|+-+--+-++..-+...+..++|++
T Consensus 27 vflL~~~i~~ik~ivk~lK~~g--K~vfiHvDLv~Gl~~~e~~i~fi~~~~~pdGI 80 (181)
T COG1954 27 VFLLTGHILNIKEIVKKLKNRG--KTVFIHVDLVEGLSNDEVAIEFIKEVIKPDGI 80 (181)
T ss_pred EEEEechhhhHHHHHHHHHhCC--cEEEEEeHHhcccCCchHHHHHHHHhccCCee
Confidence 6677777777888888888776 47888888766544444443333344678887
No 389
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=49.06 E-value=59 Score=23.00 Aligned_cols=17 Identities=12% Similarity=-0.056 Sum_probs=10.7
Q ss_pred ccccccCCcEEEEeecC
Q 040927 2 KRSNQVHYSMGEATTKD 18 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~ 18 (147)
|+.|.+.|+.|+.+.++
T Consensus 24 A~~l~~~g~~v~f~~~~ 40 (279)
T TIGR03590 24 ARALHAQGAEVAFACKP 40 (279)
T ss_pred HHHHHHCCCEEEEEeCC
Confidence 45555667777666654
No 390
>PRK10073 putative glycosyl transferase; Provisional
Probab=48.96 E-value=1e+02 Score=22.43 Aligned_cols=58 Identities=9% Similarity=0.013 Sum_probs=39.0
Q ss_pred cEEEEeecC-hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 10 SMGEATTKD-EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 10 ~~v~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
..|++...+ .+.++++++.+..+.-.+..++.+|=.+.+....++++..++.+++.++
T Consensus 8 vSVIIP~yN~~~~L~~~l~Sl~~Qt~~~~EIIiVdDgStD~t~~i~~~~~~~~~~i~vi 66 (328)
T PRK10073 8 LSIIIPLYNAGKDFRAFMESLIAQTWTALEIIIVNDGSTDNSVEIAKHYAENYPHVRLL 66 (328)
T ss_pred EEEEEeccCCHHHHHHHHHHHHhCCCCCeEEEEEeCCCCccHHHHHHHHHhhCCCEEEE
Confidence 456666655 4567788888876543357777776666667777777776666677666
No 391
>TIGR00537 hemK_rel_arch HemK-related putative methylase. The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.
Probab=48.91 E-value=72 Score=20.67 Aligned_cols=42 Identities=10% Similarity=-0.146 Sum_probs=28.9
Q ss_pred ccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCC
Q 040927 4 SNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTD 46 (147)
Q Consensus 4 ~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~ 46 (147)
.+++.|.+|+.++.+.+.++.+...+...+. ++.++.+|+.+
T Consensus 36 ~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~ 77 (179)
T TIGR00537 36 RLKGKGKCILTTDINPFAVKELRENAKLNNV-GLDVVMTDLFK 77 (179)
T ss_pred HHHhcCCEEEEEECCHHHHHHHHHHHHHcCC-ceEEEEccccc
Confidence 3455666888889888877777666655543 46777777654
No 392
>PRK12335 tellurite resistance protein TehB; Provisional
Probab=48.75 E-value=32 Score=24.44 Aligned_cols=41 Identities=12% Similarity=-0.066 Sum_probs=24.2
Q ss_pred ccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCC
Q 040927 4 SNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVT 45 (147)
Q Consensus 4 ~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~ 45 (147)
.|++.|++|+.++.+...++.+.+.....+- ++.+...|+.
T Consensus 137 ~la~~g~~V~avD~s~~ai~~~~~~~~~~~l-~v~~~~~D~~ 177 (287)
T PRK12335 137 YLALLGFDVTAVDINQQSLENLQEIAEKENL-NIRTGLYDIN 177 (287)
T ss_pred HHHHCCCEEEEEECCHHHHHHHHHHHHHcCC-ceEEEEechh
Confidence 4566677888887777666655544444333 3555555553
No 393
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=48.73 E-value=13 Score=22.83 Aligned_cols=36 Identities=22% Similarity=0.162 Sum_probs=22.2
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHH
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPA 48 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~ 48 (147)
++.|+++|+.|++++-++... + ..+.++.=|++|+.
T Consensus 29 A~~L~e~g~dv~atDI~~~~a----------~-~g~~~v~DDitnP~ 64 (129)
T COG1255 29 AKRLAERGFDVLATDINEKTA----------P-EGLRFVVDDITNPN 64 (129)
T ss_pred HHHHHHcCCcEEEEecccccC----------c-ccceEEEccCCCcc
Confidence 456677777777777765411 1 13566667777764
No 394
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=48.44 E-value=13 Score=26.34 Aligned_cols=26 Identities=8% Similarity=-0.179 Sum_probs=20.6
Q ss_pred ccccccCCcEEEEeecChhhHHHHHH
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVE 27 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~ 27 (147)
+..|++.|++|++.+++.+.+++..+
T Consensus 17 A~~la~~G~~V~~~d~~~~~~~~~~~ 42 (288)
T PRK09260 17 AYVFAVSGFQTTLVDIKQEQLESAQQ 42 (288)
T ss_pred HHHHHhCCCcEEEEeCCHHHHHHHHH
Confidence 45678889999999999887776543
No 395
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=48.39 E-value=28 Score=24.99 Aligned_cols=22 Identities=5% Similarity=-0.106 Sum_probs=18.2
Q ss_pred CccccccCCcEEEEeecChhhH
Q 040927 1 MKRSNQVHYSMGEATTKDEKRG 22 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~ 22 (147)
|+..|.+.|+.|.+.+|+.++.
T Consensus 15 mA~~L~~aG~~v~v~~r~~~ka 36 (286)
T COG2084 15 MAANLLKAGHEVTVYNRTPEKA 36 (286)
T ss_pred HHHHHHHCCCEEEEEeCChhhh
Confidence 4567889999999999998773
No 396
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=48.29 E-value=65 Score=22.94 Aligned_cols=12 Identities=8% Similarity=-0.288 Sum_probs=5.9
Q ss_pred cCCcEEEEeecC
Q 040927 7 VHYSMGEATTKD 18 (147)
Q Consensus 7 ~~G~~v~l~~r~ 18 (147)
..|++|+.+..+
T Consensus 109 ~~Ga~vi~~~~~ 120 (304)
T cd01562 109 AYGAEVVLYGED 120 (304)
T ss_pred HcCCEEEEeCCC
Confidence 345555555444
No 397
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=48.22 E-value=13 Score=26.33 Aligned_cols=26 Identities=4% Similarity=-0.181 Sum_probs=15.2
Q ss_pred ccccCC-cEEEEeecChhhHHHHHHHH
Q 040927 4 SNQVHY-SMGEATTKDEKRGLAAVEKL 29 (147)
Q Consensus 4 ~l~~~G-~~v~l~~r~~~~~~~~~~~l 29 (147)
.|...| .+|++++|+.++.+++.+++
T Consensus 141 aL~~~g~~~V~v~~R~~~~a~~l~~~~ 167 (278)
T PRK00258 141 PLLDLGVAEITIVNRTVERAEELAKLF 167 (278)
T ss_pred HHHHcCCCEEEEEeCCHHHHHHHHHHh
Confidence 445556 45666666666655555554
No 398
>PF07015 VirC1: VirC1 protein; InterPro: IPR009744 This family consists of several bacterial VirC1 proteins. In Agrobacterium tumefaciens, a cis-active 24-base-pair sequence adjacent to the right border of the T-DNA, called overdrive, stimulates tumour formation by increasing the level of T-DNA processing. It is thought that the virC operon, which enhances T-DNA processing probably, does so because the VirC1 protein interacts with overdrive. It has now been shown that the virC1 gene product binds to overdrive but not to the right border of T-DNA [].
Probab=47.66 E-value=49 Score=23.04 Aligned_cols=20 Identities=5% Similarity=-0.084 Sum_probs=16.3
Q ss_pred CccccccCCcEEEEeecChh
Q 040927 1 MKRSNQVHYSMGEATTKDEK 20 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~ 20 (147)
||..|+++|.+|.+.+-++.
T Consensus 22 LAs~la~~G~~V~lIDaDpn 41 (231)
T PF07015_consen 22 LASELAARGARVALIDADPN 41 (231)
T ss_pred HHHHHHHCCCeEEEEeCCCC
Confidence 35678899999999998764
No 399
>KOG0409 consensus Predicted dehydrogenase [General function prediction only]
Probab=47.62 E-value=26 Score=25.49 Aligned_cols=26 Identities=4% Similarity=-0.220 Sum_probs=20.3
Q ss_pred CccccccCCcEEEEeecChhhHHHHH
Q 040927 1 MKRSNQVHYSMGEATTKDEKRGLAAV 26 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~~~~~~ 26 (147)
|+..|.+.|++|++-+|+.++.+++.
T Consensus 50 M~~nLik~G~kVtV~dr~~~k~~~f~ 75 (327)
T KOG0409|consen 50 MVSNLIKAGYKVTVYDRTKDKCKEFQ 75 (327)
T ss_pred HHHHHHHcCCEEEEEeCcHHHHHHHH
Confidence 35667889999999999987765543
No 400
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=46.90 E-value=20 Score=25.44 Aligned_cols=57 Identities=9% Similarity=-0.023 Sum_probs=36.1
Q ss_pred ccccccCCcEEEEeecChhh-----HHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHH
Q 040927 2 KRSNQVHYSMGEATTKDEKR-----GLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVS 58 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 58 (147)
+..|..+|+.|--.-|.... .+.+...-....+........|++|...+.+++..++
T Consensus 45 aEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ik 106 (376)
T KOG1372|consen 45 AEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIK 106 (376)
T ss_pred HHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccC
Confidence 45678899998777665432 2222221112222357778899999999888887763
No 401
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=46.86 E-value=16 Score=25.96 Aligned_cols=26 Identities=12% Similarity=-0.210 Sum_probs=20.1
Q ss_pred ccccccCCcEEEEeecChhhHHHHHH
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVE 27 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~ 27 (147)
+..++..|++|++.+++.+.+++..+
T Consensus 19 A~~la~~G~~V~l~d~~~~~l~~~~~ 44 (291)
T PRK06035 19 AQVFARTGYDVTIVDVSEEILKNAME 44 (291)
T ss_pred HHHHHhcCCeEEEEeCCHHHHHHHHH
Confidence 45677889999999999887765433
No 402
>TIGR00735 hisF imidazoleglycerol phosphate synthase, cyclase subunit.
Probab=46.75 E-value=73 Score=22.23 Aligned_cols=25 Identities=16% Similarity=0.108 Sum_probs=13.3
Q ss_pred EEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 38 IFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 38 ~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
.+...++++++++.++... +.+|++
T Consensus 202 via~GGi~s~~di~~~~~~-----g~~dgv 226 (254)
T TIGR00735 202 VIASGGAGKPEHFYEAFTK-----GKADAA 226 (254)
T ss_pred EEEeCCCCCHHHHHHHHHc-----CCccee
Confidence 3444566666666554332 446665
No 403
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=46.73 E-value=41 Score=24.84 Aligned_cols=44 Identities=18% Similarity=0.224 Sum_probs=27.1
Q ss_pred ccccC-CcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCC-CHHHHHHHH
Q 040927 4 SNQVH-YSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVT-DPASVDSLV 54 (147)
Q Consensus 4 ~l~~~-G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~-~~~~~~~~~ 54 (147)
++++. |++|++.+++..+-++..+.| |. ..+ .|.+ |++.++.+.
T Consensus 199 q~AKAMG~rV~vis~~~~kkeea~~~L---GA---d~f-v~~~~d~d~~~~~~ 244 (360)
T KOG0023|consen 199 QYAKAMGMRVTVISTSSKKKEEAIKSL---GA---DVF-VDSTEDPDIMKAIM 244 (360)
T ss_pred HHHHHhCcEEEEEeCCchhHHHHHHhc---Cc---cee-EEecCCHHHHHHHH
Confidence 34444 999999999876666665555 43 222 3455 666665544
No 404
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=46.44 E-value=16 Score=25.93 Aligned_cols=26 Identities=8% Similarity=-0.202 Sum_probs=20.4
Q ss_pred ccccccCCcEEEEeecChhhHHHHHH
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVE 27 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~ 27 (147)
+..|+..|++|++.+++.+.++...+
T Consensus 20 A~~la~~G~~V~l~d~~~~~~~~~~~ 45 (292)
T PRK07530 20 AHVCALAGYDVLLNDVSADRLEAGLA 45 (292)
T ss_pred HHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence 45678889999999999877766543
No 405
>COG4565 CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms]
Probab=46.15 E-value=98 Score=21.41 Aligned_cols=55 Identities=16% Similarity=0.158 Sum_probs=38.2
Q ss_pred CCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 8 HYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 8 ~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
.|++++.++++.+++...+.+.+. +......=+.|...++ ++.++.+++.++|++
T Consensus 24 ~gF~~vg~A~~~~ea~~~i~~~~p----DLILLDiYmPd~~Gi~-lL~~ir~~~~~~DVI 78 (224)
T COG4565 24 PGFSVVGTAGTLEEAKMIIEEFKP----DLILLDIYMPDGNGIE-LLPELRSQHYPVDVI 78 (224)
T ss_pred CCceEEEeeccHHHHHHHHHhhCC----CEEEEeeccCCCccHH-HHHHHHhcCCCCCEE
Confidence 589999999988877777666532 3555555556666664 457777777788887
No 406
>PF10100 DUF2338: Uncharacterized protein conserved in bacteria (DUF2338); InterPro: IPR016935 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=45.07 E-value=45 Score=25.38 Aligned_cols=117 Identities=11% Similarity=0.053 Sum_probs=67.0
Q ss_pred ccCCc-EEEEeecChhhHHHHHHHHHhcCCCceEEEE-----ecCCCHHHHHHHHHHHHhhcCCccEE--ecC-CCcchh
Q 040927 6 QVHYS-MGEATTKDEKRGLAAVEKLKNSGCDNVIFHL-----LDVTDPASVDSLVHFVSSQFGKLDIL--GGL-PDNWYK 76 (147)
Q Consensus 6 ~~~G~-~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~-----~D~~~~~~~~~~~~~~~~~~g~id~l--ag~-~~~~~~ 76 (147)
.+.+. +|-+.+|...+.+...+.+...+. .+..-. --++-.-.++.+++...+-.|..|.+ |-. -.+..-
T Consensus 21 k~~~~~~vGi~~R~S~rSq~f~~aL~~~~~-~~~v~vqn~~h~~l~G~~~id~~~~~~~~i~g~WdtlILavtaDAY~~V 99 (429)
T PF10100_consen 21 KKHGNCRVGIVGRESVRSQRFFEALARSDG-LFEVSVQNEQHQALSGECTIDHVFQDYEEIEGEWDTLILAVTADAYLDV 99 (429)
T ss_pred HhccCceeeeecCcchhHHHHHHHHHhCCC-EEEEeecchhhhhhcCeEEhhHhhcCHHHhcccccEEEEEechHHHHHH
Confidence 33443 599999998888999999876432 122110 01222334666677666666777777 322 224455
Q ss_pred hhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCC--CCeEEEEcCCCC
Q 040927 77 MLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSD--SPRIVNASSSMG 123 (147)
Q Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~isS~~~ 123 (147)
+..++.+.+...=.+=+.+|.+-...++..+.... ..-||-.|+--|
T Consensus 100 L~ql~~~~L~~vk~iVLvSPtfGS~~lv~~~l~~~~~~~EVISFStY~g 148 (429)
T PF10100_consen 100 LQQLPWEVLKRVKSIVLVSPTFGSHLLVKGFLNDLGPDAEVISFSTYYG 148 (429)
T ss_pred HHhcCHHHHhhCCEEEEECcccchHHHHHHHHHhcCCCceEEEeecccc
Confidence 66777777777666666666555444444433221 245666666444
No 407
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=44.95 E-value=91 Score=24.26 Aligned_cols=64 Identities=11% Similarity=-0.023 Sum_probs=42.1
Q ss_pred cccCC-cEEEEeecChh--hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE-ec
Q 040927 5 NQVHY-SMGEATTKDEK--RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL-GG 69 (147)
Q Consensus 5 l~~~G-~~v~l~~r~~~--~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l-ag 69 (147)
|.+.| ++|-+++-..+ ..+++.+.+.+..+ ++..+.+-..+.....++++.+++..+.+-++ .|
T Consensus 32 L~~~G~~~V~iiD~~~~~~~~~~~~~~l~~~~p-dvVgis~~t~~~~~a~~~~~~~k~~~P~~~iV~GG 99 (497)
T TIGR02026 32 LLDAGYHDVTFLDAMTGPLTDEKLVERLRAHCP-DLVLITAITPAIYIACETLKFARERLPNAIIVLGG 99 (497)
T ss_pred HHhcCCcceEEecccccCCCHHHHHHHHHhcCc-CEEEEecCcccHHHHHHHHHHHHHHCCCCEEEEcC
Confidence 45678 68888875432 23556666665544 57777776666667777788888776666666 44
No 408
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=44.89 E-value=1.5e+02 Score=23.32 Aligned_cols=18 Identities=6% Similarity=-0.182 Sum_probs=13.3
Q ss_pred cCCcEEEEeecChhhHHH
Q 040927 7 VHYSMGEATTKDEKRGLA 24 (147)
Q Consensus 7 ~~G~~v~l~~r~~~~~~~ 24 (147)
..|++|++++++.+.++.
T Consensus 186 ~lGA~V~a~D~~~~rle~ 203 (509)
T PRK09424 186 SLGAIVRAFDTRPEVAEQ 203 (509)
T ss_pred HCCCEEEEEeCCHHHHHH
Confidence 458888888888776553
No 409
>TIGR01302 IMP_dehydrog inosine-5'-monophosphate dehydrogenase. This model describes a rather tightly conserved cluster of IMP dehydrogenase sequences, many of which are characterized. The model excludes two related families of proteins proposed also to be IMP dehydrogenases, but without characterized members. These are related families are the subject of separate models.
Probab=44.86 E-value=52 Score=25.25 Aligned_cols=50 Identities=6% Similarity=-0.053 Sum_probs=26.7
Q ss_pred cccCCcEEEEeec---ChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHH
Q 040927 5 NQVHYSMGEATTK---DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVH 55 (147)
Q Consensus 5 l~~~G~~v~l~~r---~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~ 55 (147)
|.+.|.+++.++- +.....+.++++++..+ ++.++..++.+.++...+.+
T Consensus 232 L~~aG~d~I~vd~a~g~~~~~~~~i~~i~~~~~-~~~vi~G~v~t~~~a~~l~~ 284 (450)
T TIGR01302 232 LVKAGVDVIVIDSSHGHSIYVIDSIKEIKKTYP-DLDIIAGNVATAEQAKALID 284 (450)
T ss_pred HHHhCCCEEEEECCCCcHhHHHHHHHHHHHhCC-CCCEEEEeCCCHHHHHHHHH
Confidence 4455666555544 33344455555555432 35555566666666655543
No 410
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=44.84 E-value=46 Score=24.00 Aligned_cols=20 Identities=5% Similarity=-0.155 Sum_probs=14.7
Q ss_pred ccccccCCcEEEEeecChhh
Q 040927 2 KRSNQVHYSMGEATTKDEKR 21 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~ 21 (147)
+..|.+.|+.|+++.|+..+
T Consensus 15 ~~~L~~~gh~v~iltR~~~~ 34 (297)
T COG1090 15 TARLRKGGHQVTILTRRPPK 34 (297)
T ss_pred HHHHHhCCCeEEEEEcCCcc
Confidence 34566778888888888754
No 411
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=44.74 E-value=18 Score=25.90 Aligned_cols=31 Identities=6% Similarity=-0.041 Sum_probs=21.8
Q ss_pred cccccCCc-EEEEeecChhhHHHHHHHHHhcC
Q 040927 3 RSNQVHYS-MGEATTKDEKRGLAAVEKLKNSG 33 (147)
Q Consensus 3 ~~l~~~G~-~v~l~~r~~~~~~~~~~~l~~~~ 33 (147)
..|++.|. +|.++.|+.++++++.+.+...+
T Consensus 143 ~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~ 174 (283)
T COG0169 143 FALAEAGAKRITVVNRTRERAEELADLFGELG 174 (283)
T ss_pred HHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc
Confidence 34667774 58888888888777777776544
No 412
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=44.73 E-value=17 Score=24.61 Aligned_cols=27 Identities=11% Similarity=-0.104 Sum_probs=20.7
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHH
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEK 28 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~ 28 (147)
++.|++.|++|.+.+|+.+..+.+.+.
T Consensus 17 a~~L~~~G~~V~v~~r~~~~~~~l~~~ 43 (219)
T TIGR01915 17 ALRLAKAGNKIIIGSRDLEKAEEAAAK 43 (219)
T ss_pred HHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence 456778899999999998777665543
No 413
>COG1897 MetA Homoserine trans-succinylase [Amino acid transport and metabolism]
Probab=44.63 E-value=45 Score=23.72 Aligned_cols=66 Identities=17% Similarity=0.245 Sum_probs=37.8
Q ss_pred eEEEEecCCC-----HHHHHHH---HHHHHhhcCCccEE--ecCCCcchhhhccc-HHHHHHhHH---HhhhhHHHHHHH
Q 040927 37 VIFHLLDVTD-----PASVDSL---VHFVSSQFGKLDIL--GGLPDNWYKMLTQT-YELAEKCIQ---TNYYGNKRMCEA 102 (147)
Q Consensus 37 ~~~~~~D~~~-----~~~~~~~---~~~~~~~~g~id~l--ag~~~~~~~~~~~~-~~~~~~~~~---~n~~~~~~l~~~ 102 (147)
+.++..|-.. .+-+.++ ++++++ ...|++ .|-+-...++.+.+ ++++.++|+ .|+.+++++|=.
T Consensus 67 itll~~~sh~~KnTp~eHl~~FY~tfeeVk~--~~FDG~IiTGAPve~l~feeV~YW~el~~I~eWskt~V~STl~ICWg 144 (307)
T COG1897 67 ITLLRIDSHESKNTPAEHLNSFYCTFEEVKD--QKFDGLIITGAPVELLPFEEVAYWEELKQIFEWSKTHVTSTLHICWG 144 (307)
T ss_pred EEEEEecCcCCCCCcHHHHHHHhhcHHHHhh--cccCceEEeCCcccccCchhhhhHHHHHHHHHHHhhcchhhhhhHHH
Confidence 4555554322 3344444 344444 377887 55444456666665 356666655 899999887744
Q ss_pred HH
Q 040927 103 LI 104 (147)
Q Consensus 103 ~~ 104 (147)
+-
T Consensus 145 aq 146 (307)
T COG1897 145 AQ 146 (307)
T ss_pred HH
Confidence 43
No 414
>PRK07048 serine/threonine dehydratase; Validated
Probab=44.49 E-value=61 Score=23.45 Aligned_cols=61 Identities=11% Similarity=-0.033 Sum_probs=29.4
Q ss_pred ccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEec-CCCHHHHHHHHHHHHhhcCCccEE
Q 040927 6 QVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLD-VTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 6 ~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D-~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
...|++|+.+..+.+...+..+++....+ .+.....| -...........++.++.+.+|.+
T Consensus 115 ~~~GAeV~~~~~~~~~~~~~a~~l~~~~g-~~~~~~~~~~~~~~g~~t~~~EI~~q~~~~D~v 176 (321)
T PRK07048 115 RGYGGEVVTYDRYTEDREEIGRRLAEERG-LTLIPPYDHPHVIAGQGTAAKELFEEVGPLDAL 176 (321)
T ss_pred HHCCCEEEEECCCHHHHHHHHHHHHHhcC-CEEECCCCCcchhhccchHHHHHHhhcCCCCEE
Confidence 34577777777554444445555544332 12222221 111222233445666666667777
No 415
>PRK00748 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Validated
Probab=44.44 E-value=56 Score=22.24 Aligned_cols=13 Identities=8% Similarity=0.343 Sum_probs=6.6
Q ss_pred HHHHHHHHHhcCC
Q 040927 22 GLAAVEKLKNSGC 34 (147)
Q Consensus 22 ~~~~~~~l~~~~~ 34 (147)
..+..+.+...+.
T Consensus 148 ~~e~~~~~~~~g~ 160 (233)
T PRK00748 148 AEDLAKRFEDAGV 160 (233)
T ss_pred HHHHHHHHHhcCC
Confidence 3445555555544
No 416
>PF01795 Methyltransf_5: MraW methylase family; InterPro: IPR002903 This is a family of S-adenosyl-L-methionine-dependent methyltransferases, which are found primarily, though not exclusively, in bacteria. The Escherichia coli protein is essential and has been linked to peptidoglycan biosynthesis [, ].; GO: 0008168 methyltransferase activity; PDB: 1N2X_A 1M6Y_A 1WG8_A 3TKA_A.
Probab=44.04 E-value=34 Score=24.90 Aligned_cols=54 Identities=17% Similarity=0.088 Sum_probs=35.2
Q ss_pred CcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 9 YSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 9 G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
+.+|+..+|+++.++...+.+..... ++.++..++++.... +... ...+.+|++
T Consensus 44 ~~~li~~DrD~~a~~~a~~~l~~~~~-r~~~~~~~F~~l~~~---l~~~-~~~~~~dgi 97 (310)
T PF01795_consen 44 NGRLIGIDRDPEALERAKERLKKFDD-RFIFIHGNFSNLDEY---LKEL-NGINKVDGI 97 (310)
T ss_dssp T-EEEEEES-HHHHHHHHCCTCCCCT-TEEEEES-GGGHHHH---HHHT-TTTS-EEEE
T ss_pred CCeEEEecCCHHHHHHHHHHHhhccc-eEEEEeccHHHHHHH---HHHc-cCCCccCEE
Confidence 47899999999888777777765544 799999988765444 3333 233678887
No 417
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=43.87 E-value=18 Score=25.99 Aligned_cols=24 Identities=13% Similarity=-0.230 Sum_probs=19.1
Q ss_pred ccccccCCcEEEEeecChhhHHHH
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAA 25 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~ 25 (147)
+..|++.|++|++.+++.+..+..
T Consensus 18 A~~la~~G~~V~v~d~~~~~~~~~ 41 (308)
T PRK06129 18 AIVFARAGHEVRLWDADPAAAAAA 41 (308)
T ss_pred HHHHHHCCCeeEEEeCCHHHHHHH
Confidence 456788999999999998766554
No 418
>PRK03910 D-cysteine desulfhydrase; Validated
Probab=43.76 E-value=1.3e+02 Score=21.98 Aligned_cols=62 Identities=8% Similarity=0.041 Sum_probs=33.6
Q ss_pred cccCCcEEEEeecCh---hhHHHHHHHHHhcCCCceEEEEecCCCH---HHHHHHHHHHHhhcC----CccEE
Q 040927 5 NQVHYSMGEATTKDE---KRGLAAVEKLKNSGCDNVIFHLLDVTDP---ASVDSLVHFVSSQFG----KLDIL 67 (147)
Q Consensus 5 l~~~G~~v~l~~r~~---~~~~~~~~~l~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~~~g----~id~l 67 (147)
+...|++|+.+.++. ....+..+++..... ...++.-+-.++ .....+..++.++++ .+|.+
T Consensus 116 ~~~~Ga~vi~~~~~~~~~~~~~~~a~~l~~~~~-~~~~~~~~~~~~~~~~g~~~~~~Ei~~q~~~~~~~~d~v 187 (331)
T PRK03910 116 DDLFGAEIHVVPAGTDMDAQLEELAEELRAQGR-RPYVIPVGGSNALGALGYVACALEIAQQLAEGGVDFDAV 187 (331)
T ss_pred HHHcCCEEEEeCccchHHHHHHHHHHHHHHcCC-ceEEECCCCCCchhHHHHHHHHHHHHHHHHhcCCCCCEE
Confidence 446799999988752 223344455554432 234443333343 333345566766654 58887
No 419
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=43.76 E-value=16 Score=20.90 Aligned_cols=27 Identities=4% Similarity=-0.045 Sum_probs=18.8
Q ss_pred cccccCC---cEEEEe-ecChhhHHHHHHHH
Q 040927 3 RSNQVHY---SMGEAT-TKDEKRGLAAVEKL 29 (147)
Q Consensus 3 ~~l~~~G---~~v~l~-~r~~~~~~~~~~~l 29 (147)
+.|.+.| .+|.+. .|+.++.+++.++.
T Consensus 16 ~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~ 46 (96)
T PF03807_consen 16 RGLLASGIKPHEVIIVSSRSPEKAAELAKEY 46 (96)
T ss_dssp HHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred HHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence 4456677 888855 88888777766554
No 420
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=43.69 E-value=78 Score=19.96 Aligned_cols=56 Identities=4% Similarity=-0.204 Sum_probs=35.3
Q ss_pred cccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEe-cCCCHHHHHHHHHHHHhh
Q 040927 3 RSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLL-DVTDPASVDSLVHFVSSQ 60 (147)
Q Consensus 3 ~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~-D~~~~~~~~~~~~~~~~~ 60 (147)
+.|...|++|+-++.+.. .++..+...+... .+..+.. -.+....+.++.+.++++
T Consensus 23 ~~l~~~GfeVi~LG~~v~-~e~~v~aa~~~~a-diVglS~l~~~~~~~~~~~~~~l~~~ 79 (134)
T TIGR01501 23 HAFTNAGFNVVNLGVLSP-QEEFIKAAIETKA-DAILVSSLYGHGEIDCKGLRQKCDEA 79 (134)
T ss_pred HHHHHCCCEEEECCCCCC-HHHHHHHHHHcCC-CEEEEecccccCHHHHHHHHHHHHHC
Confidence 456678999988887653 3555555555544 3444433 345566788888787765
No 421
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=43.50 E-value=1.3e+02 Score=22.00 Aligned_cols=57 Identities=11% Similarity=0.134 Sum_probs=40.9
Q ss_pred ccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 040927 6 QVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDI 66 (147)
Q Consensus 6 ~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 66 (147)
...|..+++++.+.....++..++...|. .+.. ...|.+..+.+.+++.+....-++
T Consensus 32 ~~~~~~~vVTGansGIG~eta~~La~~Ga-~Vv~---~~R~~~~~~~~~~~i~~~~~~~~i 88 (314)
T KOG1208|consen 32 DLSGKVALVTGATSGIGFETARELALRGA-HVVL---ACRNEERGEEAKEQIQKGKANQKI 88 (314)
T ss_pred cCCCcEEEEECCCCchHHHHHHHHHhCCC-EEEE---EeCCHHHHHHHHHHHHhcCCCCce
Confidence 34567789999999999999999998874 3333 345667778888888775444343
No 422
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=43.34 E-value=20 Score=25.45 Aligned_cols=27 Identities=11% Similarity=-0.143 Sum_probs=20.2
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHH
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEK 28 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~ 28 (147)
+..+++.|++|.+.+++.+.+++..+.
T Consensus 19 A~~la~~G~~V~l~d~~~~~l~~~~~~ 45 (287)
T PRK08293 19 AFQTAFHGFDVTIYDISDEALEKAKER 45 (287)
T ss_pred HHHHHhcCCeEEEEeCCHHHHHHHHHH
Confidence 456778899999999998766655443
No 423
>COG1352 CheR Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms]
Probab=43.30 E-value=38 Score=24.09 Aligned_cols=47 Identities=13% Similarity=0.068 Sum_probs=32.3
Q ss_pred cHHHHHHhHHHhhhhHHH-------HHHHHHHhhccCCCCeEEEEcCCCCCCcC
Q 040927 81 TYELAEKCIQTNYYGNKR-------MCEALIPLLQLSDSPRIVNASSSMGKLKN 127 (147)
Q Consensus 81 ~~~~~~~~~~~n~~~~~~-------l~~~~~~~l~~~~~~~iv~isS~~~~~~~ 127 (147)
..+.+-+.+.+|++..|. +-+..+|.+.+..+++.+.|-|.+...|-
T Consensus 56 e~~~~l~~ltin~T~FFR~~~~f~~l~~~v~p~l~~~~~~~~irIWSaaCStGE 109 (268)
T COG1352 56 ELQAFLDALTINVTEFFRDPEHFEELRDEVLPELVKRKKGRPIRIWSAACSTGE 109 (268)
T ss_pred HHHHHHHHhhhccchhccCcHHHHHHHHHHHHHHHhhccCCceEEEecCcCCCc
Confidence 345666777788886653 77788888776655567888887765553
No 424
>PF13382 Adenine_deam_C: Adenine deaminase C-terminal domain; PDB: 3T8L_B 3T81_A 3NQB_A.
Probab=43.27 E-value=69 Score=21.14 Aligned_cols=31 Identities=13% Similarity=-0.027 Sum_probs=18.6
Q ss_pred ccccCCcEEEEeecChhhHHHHHHHHHhcCC
Q 040927 4 SNQVHYSMGEATTKDEKRGLAAVEKLKNSGC 34 (147)
Q Consensus 4 ~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~ 34 (147)
.++..-++++++++|.+......+++.+.++
T Consensus 60 S~ahDshniiviG~~~~dm~~A~n~l~~~gG 90 (171)
T PF13382_consen 60 SVAHDSHNIIVIGTNDEDMALAANRLIEMGG 90 (171)
T ss_dssp S--TTT--EEEEESSHHHHHHHHHHHHHTTS
T ss_pred EcccCCCCEEEEECCHHHHHHHHHHHHHhCC
Confidence 3445566777777777777777777766554
No 425
>PF04672 Methyltransf_19: S-adenosyl methyltransferase; InterPro: IPR006764 This is a family of uncharacterised proteins.; PDB: 3GIW_A 3GO4_A 2QE6_A.
Probab=42.97 E-value=56 Score=23.28 Aligned_cols=46 Identities=13% Similarity=0.032 Sum_probs=27.6
Q ss_pred cCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHH
Q 040927 7 VHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDS 52 (147)
Q Consensus 7 ~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~ 52 (147)
...++|+-++.+.--+......|.........++.+|+++++.+-.
T Consensus 93 ~P~aRVVYVD~DPvv~ah~ralL~~~~~g~t~~v~aD~r~p~~iL~ 138 (267)
T PF04672_consen 93 APDARVVYVDNDPVVLAHARALLADNPRGRTAYVQADLRDPEAILA 138 (267)
T ss_dssp -TT-EEEEEESSHHHHHCCHHHHTT-TTSEEEEEE--TT-HHHHHC
T ss_pred CCCceEEEECCCchHHHHHHhhhcCCCCccEEEEeCCCCCHHHHhc
Confidence 3467888888887655555555554432248899999999988855
No 426
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=42.51 E-value=28 Score=24.53 Aligned_cols=20 Identities=5% Similarity=-0.212 Sum_probs=14.8
Q ss_pred ccccccCCcEEEEeecChhh
Q 040927 2 KRSNQVHYSMGEATTKDEKR 21 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~ 21 (147)
++.|.+.|++|+.+.++...
T Consensus 16 a~~L~~~g~~v~~s~~t~~~ 35 (256)
T TIGR00715 16 AKGLIAQGIEILVTVTTSEG 35 (256)
T ss_pred HHHHHhCCCeEEEEEccCCc
Confidence 45667789988888887653
No 427
>PRK02842 light-independent protochlorophyllide reductase subunit N; Provisional
Probab=42.27 E-value=64 Score=24.54 Aligned_cols=100 Identities=9% Similarity=-0.133 Sum_probs=47.7
Q ss_pred cccccc-CCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE-ecCCCcchhhhc
Q 040927 2 KRSNQV-HYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL-GGLPDNWYKMLT 79 (147)
Q Consensus 2 ~~~l~~-~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l-ag~~~~~~~~~~ 79 (147)
++.|.+ .|..++.++.....-+...++++.... .+. ..|=.|..++.+.+.+ .++|++ ++.. ...|+..
T Consensus 306 a~~L~eelGm~~v~v~t~~~~~~~~~~~~~~l~~-~~~--v~~~~D~~~l~~~i~~-----~~pDllig~~~-~~~pl~r 376 (427)
T PRK02842 306 ARFLSRECGMELVEVGTPYLNRRFLAAELALLPD-GVR--IVEGQDVERQLDRIRA-----LRPDLVVCGLG-LANPLEA 376 (427)
T ss_pred HHHHHHhCCCEEEEeCCCCCCHHHHHHHHHhccC-CCE--EEECCCHHHHHHHHHH-----cCCCEEEccCc-cCCchhh
Confidence 455666 788877765432211211222332222 222 2444556666555544 378988 4421 1112111
Q ss_pred ccH-----HHHHHhHHHhhhhHHHHHHHHHHhhccC
Q 040927 80 QTY-----ELAEKCIQTNYYGNKRMCEALIPLLQLS 110 (147)
Q Consensus 80 ~~~-----~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 110 (147)
.-. -.+...-.+-+.|...+...+...+.++
T Consensus 377 ~GfP~~dr~~~~~~p~~Gy~G~~~l~~~~~~~l~~~ 412 (427)
T PRK02842 377 EGITTKWSIEFVFTPIHGFEQAGDLAELFTRPLRRR 412 (427)
T ss_pred cCCceeEEEeeeeecccchhhHHHHHHHHHHHhhhh
Confidence 111 1122334556777777777777666544
No 428
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=42.17 E-value=10 Score=27.92 Aligned_cols=47 Identities=13% Similarity=0.051 Sum_probs=33.9
Q ss_pred ccccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHH
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLV 54 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~ 54 (147)
+++|+.+|.+..+.+||..++..+..+|. . ....+.+.+ ++.++.+.
T Consensus 23 ae~l~~~g~~~aLAgRs~~kl~~l~~~LG---~-~~~~~p~~~--p~~~~~~~ 69 (382)
T COG3268 23 AEYLAREGLTAALAGRSSAKLDALRASLG---P-EAAVFPLGV--PAALEAMA 69 (382)
T ss_pred HHHHHHcCCchhhccCCHHHHHHHHHhcC---c-cccccCCCC--HHHHHHHH
Confidence 56788899999999999999998888873 2 344555554 55555544
No 429
>PRK13562 acetolactate synthase 1 regulatory subunit; Provisional
Probab=42.08 E-value=69 Score=18.47 Aligned_cols=16 Identities=25% Similarity=0.445 Sum_probs=8.9
Q ss_pred cCCCHHHHHHHHHHHH
Q 040927 43 DVTDPASVDSLVHFVS 58 (147)
Q Consensus 43 D~~~~~~~~~~~~~~~ 58 (147)
+..|++.++++..++.
T Consensus 51 ~~~d~~~ieqI~kQL~ 66 (84)
T PRK13562 51 DIQDDTSLHILIKKLK 66 (84)
T ss_pred eCCCHHHHHHHHHHHh
Confidence 3455566666655554
No 430
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=42.03 E-value=1.2e+02 Score=21.44 Aligned_cols=68 Identities=13% Similarity=0.066 Sum_probs=41.0
Q ss_pred hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE--ecCCCcchhhhcccHHHHHHhHHHhhh
Q 040927 21 RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL--GGLPDNWYKMLTQTYELAEKCIQTNYY 94 (147)
Q Consensus 21 ~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l--ag~~~~~~~~~~~~~~~~~~~~~~n~~ 94 (147)
+..-+.+.|...|- .+..+..=--|++++...++...+ +.|++ .|..++. -++++.+.+-+.+...+.
T Consensus 22 Na~~la~~L~~~G~-~v~~~~~VgD~~~~I~~~l~~a~~---r~D~vI~tGGLGPT--~DDiT~e~vAka~g~~lv 91 (255)
T COG1058 22 NAAFLADELTELGV-DLARITTVGDNPDRIVEALREASE---RADVVITTGGLGPT--HDDLTAEAVAKALGRPLV 91 (255)
T ss_pred hHHHHHHHHHhcCc-eEEEEEecCCCHHHHHHHHHHHHh---CCCEEEECCCcCCC--ccHhHHHHHHHHhCCCcc
Confidence 45667778888875 455544433456677666666654 47877 3433232 236777777777776654
No 431
>PRK14484 phosphotransferase mannnose-specific family component IIA; Provisional
Probab=42.01 E-value=61 Score=20.13 Aligned_cols=48 Identities=8% Similarity=0.042 Sum_probs=24.1
Q ss_pred EEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhh
Q 040927 12 GEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQ 60 (147)
Q Consensus 12 v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 60 (147)
+++++++..-.+.+.+.++.-- +++.+..++..+..++.....++.+.
T Consensus 4 IVlVSHs~~lA~gl~~~~~~i~-~~~~i~~~gg~~d~~~gt~~~~i~~a 51 (124)
T PRK14484 4 IVIVSHSKKIAEGVKDLIKQMA-PDVPIIYAGGTEDGRIGTSFDQIQEA 51 (124)
T ss_pred EEEEeCcHHHHHHHHHHHHHhh-CCCCEEEecCCCCCCccchHHHHHHH
Confidence 6777887443333333333221 24566666666544455444444443
No 432
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=41.68 E-value=1.5e+02 Score=23.42 Aligned_cols=68 Identities=13% Similarity=-0.028 Sum_probs=34.9
Q ss_pred ccccccCCcEEEEeecCh---hhHHHH---HHHHHhcCCCceEEE----EecCCCHHHHHHHHHHHHhhcCCccEE----
Q 040927 2 KRSNQVHYSMGEATTKDE---KRGLAA---VEKLKNSGCDNVIFH----LLDVTDPASVDSLVHFVSSQFGKLDIL---- 67 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~---~~~~~~---~~~l~~~~~~~~~~~----~~D~~~~~~~~~~~~~~~~~~g~id~l---- 67 (147)
|.+|.+++++|.+.+.+. ...|++ .+.+.+.++..+.++ .-|.+ .-..++++.... ...|++
T Consensus 399 ayWLlqNkfrVLIAACDTFRsGAvEQLrtHv~rl~~l~~~~v~lfekGYgkd~a--~vak~AI~~a~~--~gfDVvLiDT 474 (587)
T KOG0781|consen 399 AYWLLQNKFRVLIAACDTFRSGAVEQLRTHVERLSALHGTMVELFEKGYGKDAA--GVAKEAIQEARN--QGFDVVLIDT 474 (587)
T ss_pred HHHHHhCCceEEEEeccchhhhHHHHHHHHHHHHHHhccchhHHHhhhcCCChH--HHHHHHHHHHHh--cCCCEEEEec
Confidence 567888899988876542 233333 344443333223222 22422 223344454443 467877
Q ss_pred ecCCCc
Q 040927 68 GGLPDN 73 (147)
Q Consensus 68 ag~~~~ 73 (147)
||....
T Consensus 475 AGR~~~ 480 (587)
T KOG0781|consen 475 AGRMHN 480 (587)
T ss_pred cccccC
Confidence 776644
No 433
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=41.46 E-value=36 Score=24.30 Aligned_cols=30 Identities=13% Similarity=-0.035 Sum_probs=21.0
Q ss_pred cccccCCc-EEEEeecChhhHHHHHHHHHhc
Q 040927 3 RSNQVHYS-MGEATTKDEKRGLAAVEKLKNS 32 (147)
Q Consensus 3 ~~l~~~G~-~v~l~~r~~~~~~~~~~~l~~~ 32 (147)
..|...|. +|++++|+.++.+.+.+++...
T Consensus 144 ~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~ 174 (284)
T PRK12549 144 HALLTLGVERLTIFDVDPARAAALADELNAR 174 (284)
T ss_pred HHHHHcCCCEEEEECCCHHHHHHHHHHHHhh
Confidence 34556676 5888888888877777777544
No 434
>PRK07334 threonine dehydratase; Provisional
Probab=41.45 E-value=65 Score=24.24 Aligned_cols=62 Identities=13% Similarity=-0.015 Sum_probs=32.1
Q ss_pred cccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEe-cCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 5 NQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLL-DVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 5 l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~-D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
+...|++|+.+..+.+...+...++....+ .+..... |....+.......++.++.+.+|.+
T Consensus 113 ~~~~GA~v~~~~~~~~~~~~~a~~l~~~~~-~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~d~v 175 (403)
T PRK07334 113 TRGFGAEVVLHGETLDEARAHARELAEEEG-LTFVHPYDDPAVIAGQGTVALEMLEDAPDLDTL 175 (403)
T ss_pred HHHcCCEEEEECcCHHHHHHHHHHHHHhcC-CEecCCCCCHHHHHhHHHHHHHHHhcCCCCCEE
Confidence 345688887776554444445555544332 1222222 1222333444566666666667777
No 435
>PRK06815 hypothetical protein; Provisional
Probab=41.40 E-value=88 Score=22.64 Aligned_cols=62 Identities=11% Similarity=-0.056 Sum_probs=33.6
Q ss_pred cccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEec-CCCHHHHHHHHHHHHhhcCCccEE
Q 040927 5 NQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLD-VTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 5 l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D-~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
+...|++|+.+..+.+...+...++....+ .......| ....+....+..++.++++.+|.+
T Consensus 110 ~~~~GA~V~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~g~~t~a~Ei~~q~~~~d~v 172 (317)
T PRK06815 110 IRALGAEVRLYGGDALNAELAARRAAEQQG-KVYISPYNDPQVIAGQGTIGMELVEQQPDLDAV 172 (317)
T ss_pred HHHCCCEEEEECCCHHHHHHHHHHHHHhcC-CEEecCCCChhhhcchhHHHHHHHHhcCCCCEE
Confidence 345688888887765554444555544332 12222221 111233345667777777778887
No 436
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=41.20 E-value=21 Score=22.43 Aligned_cols=25 Identities=8% Similarity=-0.080 Sum_probs=12.5
Q ss_pred cccCC-cEEEEeecChhhHHHHHHHH
Q 040927 5 NQVHY-SMGEATTKDEKRGLAAVEKL 29 (147)
Q Consensus 5 l~~~G-~~v~l~~r~~~~~~~~~~~l 29 (147)
|.+.| .+|.+.+|+.+..++..+++
T Consensus 38 l~~~g~~~v~v~~r~~~~~~~~~~~~ 63 (155)
T cd01065 38 LAELGAAKIVIVNRTLEKAKALAERF 63 (155)
T ss_pred HHHCCCCEEEEEcCCHHHHHHHHHHH
Confidence 33443 45666666655554444443
No 437
>COG0788 PurU Formyltetrahydrofolate hydrolase [Nucleotide transport and metabolism]
Probab=41.12 E-value=1.3e+02 Score=21.55 Aligned_cols=73 Identities=10% Similarity=-0.026 Sum_probs=39.0
Q ss_pred ecCCCHHHHHHHHHHHHhhcCCccEE-ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEc
Q 040927 42 LDVTDPASVDSLVHFVSSQFGKLDIL-GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDSPRIVNAS 119 (147)
Q Consensus 42 ~D~~~~~~~~~~~~~~~~~~g~id~l-ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~is 119 (147)
+=++|-++.+.+++.. + |..- .+......+-.+...-++.+..++.+.-...-+|.+-|.+.+.=.|+||||=
T Consensus 122 ~VIsNH~dl~~~v~~~----~-IPfhhip~~~~~k~e~E~~~~~ll~~~~~DlvVLARYMqILS~d~~~~~~g~iINIH 195 (287)
T COG0788 122 AVISNHDDLRPLVERF----D-IPFHHIPVTKENKAEAEARLLELLEEYGADLVVLARYMQILSPDFVERFPGKIINIH 195 (287)
T ss_pred EEEcCCHHHHHHHHHc----C-CCeeeccCCCCcchHHHHHHHHHHHHhCCCEEeehhhHhhCCHHHHHhccCcEEEec
Confidence 3467777776665442 2 2222 2222111221122222333334456666667778888888777678899986
No 438
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=41.07 E-value=13 Score=23.78 Aligned_cols=26 Identities=12% Similarity=-0.207 Sum_probs=19.5
Q ss_pred ccccccCCcEEEEeecChhhHHHHHH
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVE 27 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~ 27 (147)
+..|+.+|++|.+..|+.+..+.+.+
T Consensus 15 A~~la~~g~~V~l~~~~~~~~~~i~~ 40 (157)
T PF01210_consen 15 AALLADNGHEVTLWGRDEEQIEEINE 40 (157)
T ss_dssp HHHHHHCTEEEEEETSCHHHHHHHHH
T ss_pred HHHHHHcCCEEEEEeccHHHHHHHHH
Confidence 45678889999999998866555544
No 439
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=40.99 E-value=21 Score=24.71 Aligned_cols=31 Identities=16% Similarity=-0.056 Sum_probs=20.0
Q ss_pred cccccCCcEEEE-eecChhhHHHHHHHHHhcC
Q 040927 3 RSNQVHYSMGEA-TTKDEKRGLAAVEKLKNSG 33 (147)
Q Consensus 3 ~~l~~~G~~v~l-~~r~~~~~~~~~~~l~~~~ 33 (147)
+.+.++|++|++ ++|+....+.+.+.|...|
T Consensus 130 ~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G 161 (229)
T TIGR01675 130 QKIIELGIKIFLLSGRWEELRNATLDNLINAG 161 (229)
T ss_pred HHHHHCCCEEEEEcCCChHHHHHHHHHHHHcC
Confidence 345677888555 5676666566777776654
No 440
>PRK05370 argininosuccinate synthase; Validated
Probab=40.91 E-value=1.6e+02 Score=22.79 Aligned_cols=55 Identities=9% Similarity=-0.023 Sum_probs=33.9
Q ss_pred CCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCC--HHHHHHHHHHHHhhcCCc
Q 040927 8 HYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTD--PASVDSLVHFVSSQFGKL 64 (147)
Q Consensus 8 ~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 64 (147)
.|.+|++.+...=...-++..|++.+. .+..+.+|+-+ .++++.+-++... .|..
T Consensus 10 ~~~KVvLAYSGGLDTSv~l~wL~e~~~-eVia~~aDvGQ~~~ed~~~i~~kA~~-~GA~ 66 (447)
T PRK05370 10 VGQRVGIAFSGGLDTSAALLWMRQKGA-VPYAYTANLGQPDEDDYDAIPRRAME-YGAE 66 (447)
T ss_pred CCCEEEEEecCCchHHHHHHHHHhcCC-eEEEEEEECCCCCccchHHHHHHHHH-hCCC
Confidence 477888887653222334555666554 58889999987 4566665555443 3543
No 441
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=40.26 E-value=23 Score=25.18 Aligned_cols=24 Identities=4% Similarity=-0.329 Sum_probs=18.9
Q ss_pred ccccccCCcEEEEeecChhhHHHH
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAA 25 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~ 25 (147)
++.|+..|++|++.+++.+.+++.
T Consensus 20 A~~l~~~G~~V~~~d~~~~~~~~~ 43 (295)
T PLN02545 20 AQLAAAAGMDVWLLDSDPAALSRG 43 (295)
T ss_pred HHHHHhcCCeEEEEeCCHHHHHHH
Confidence 456788899999999998776543
No 442
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=40.23 E-value=1.4e+02 Score=21.49 Aligned_cols=29 Identities=10% Similarity=-0.086 Sum_probs=21.7
Q ss_pred cccccCC--cEEEEeecChhhHHHHHHHHHh
Q 040927 3 RSNQVHY--SMGEATTKDEKRGLAAVEKLKN 31 (147)
Q Consensus 3 ~~l~~~G--~~v~l~~r~~~~~~~~~~~l~~ 31 (147)
..|+..| .+|++++++.+.++....++..
T Consensus 17 ~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~ 47 (306)
T cd05291 17 YSLVNQGIADELVLIDINEEKAEGEALDLED 47 (306)
T ss_pred HHHHhcCCCCEEEEEeCCcchhhHhHhhHHH
Confidence 4456677 5799999998887777777754
No 443
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=39.88 E-value=1e+02 Score=19.94 Aligned_cols=47 Identities=6% Similarity=-0.040 Sum_probs=27.6
Q ss_pred EEeecC-hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHh
Q 040927 13 EATTKD-EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSS 59 (147)
Q Consensus 13 ~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 59 (147)
+++..+ .+.++++++.+.+.......++.+|=.+.+...+.+++...
T Consensus 2 iI~~~n~~~~l~~~l~sl~~q~~~~~eiiivD~~s~d~t~~~~~~~~~ 49 (202)
T cd04185 2 VVVTYNRLDLLKECLDALLAQTRPPDHIIVIDNASTDGTAEWLTSLGD 49 (202)
T ss_pred EEEeeCCHHHHHHHHHHHHhccCCCceEEEEECCCCcchHHHHHHhcC
Confidence 344444 45577777777665332356666766666666666665543
No 444
>PF13433 Peripla_BP_5: Periplasmic binding protein domain; PDB: 1QNL_A 1QO0_A 1PEA_A.
Probab=39.78 E-value=1.6e+02 Score=22.13 Aligned_cols=59 Identities=14% Similarity=0.105 Sum_probs=33.3
Q ss_pred ccCC-cEEEEeecCh---hhHHHHH-HHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 6 QVHY-SMGEATTKDE---KRGLAAV-EKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 6 ~~~G-~~v~l~~r~~---~~~~~~~-~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
.+.| .++++++.|- ....++. +.+.+.|++-+--.-+.+. ..++..++++|++. ++|++
T Consensus 130 ~~~G~~r~~lvGSdYv~pre~Nri~r~~l~~~GgevvgE~Y~plg-~td~~~ii~~I~~~--~Pd~V 193 (363)
T PF13433_consen 130 ENFGAKRFYLVGSDYVYPRESNRIIRDLLEARGGEVVGERYLPLG-ATDFDPIIAEIKAA--KPDFV 193 (363)
T ss_dssp HHS--SEEEEEEESSHHHHHHHHHHHHHHHHTT-EEEEEEEE-S--HHHHHHHHHHHHHH--T-SEE
T ss_pred hccCCceEEEecCCccchHHHHHHHHHHHHHcCCEEEEEEEecCC-chhHHHHHHHHHhh--CCCEE
Confidence 3458 8899999884 2333433 3445556522222223333 26788889999887 78887
No 445
>PRK11204 N-glycosyltransferase; Provisional
Probab=39.72 E-value=1.5e+02 Score=22.18 Aligned_cols=58 Identities=9% Similarity=0.063 Sum_probs=35.2
Q ss_pred cEEEEeecCh-hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 10 SMGEATTKDE-KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 10 ~~v~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
..|++...|+ +.++++.+.+.+..-++.+++.+|=.+.++..+.+++..++++++.++
T Consensus 56 vsViIp~yne~~~i~~~l~sl~~q~yp~~eiiVvdD~s~d~t~~~l~~~~~~~~~v~~i 114 (420)
T PRK11204 56 VSILVPCYNEGENVEETISHLLALRYPNYEVIAINDGSSDNTGEILDRLAAQIPRLRVI 114 (420)
T ss_pred EEEEEecCCCHHHHHHHHHHHHhCCCCCeEEEEEECCCCccHHHHHHHHHHhCCcEEEE
Confidence 4566666665 446677777665432356777776665666667777666655545444
No 446
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=39.61 E-value=53 Score=22.46 Aligned_cols=56 Identities=11% Similarity=-0.050 Sum_probs=34.6
Q ss_pred cccccCCcEEEEeecChhhHHHHHHHHHh------------cCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 3 RSNQVHYSMGEATTKDEKRGLAAVEKLKN------------SGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 3 ~~l~~~G~~v~l~~r~~~~~~~~~~~l~~------------~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
..|+++|++|+.++-+....++..++-.. ....++.++.+|+-+... +..|++|.+
T Consensus 53 ~~La~~G~~VvGvDls~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~gDfF~l~~---------~~~g~fD~i 120 (218)
T PF05724_consen 53 LWLAEQGHDVVGVDLSPTAIEQAFEENNLEPTVTSVGGFKRYQAGRITIYCGDFFELPP---------EDVGKFDLI 120 (218)
T ss_dssp HHHHHTTEEEEEEES-HHHHHHHHHHCTTEEECTTCTTEEEETTSSEEEEES-TTTGGG---------SCHHSEEEE
T ss_pred HHHHHCCCeEEEEecCHHHHHHHHHHhccCCCcccccceeeecCCceEEEEcccccCCh---------hhcCCceEE
Confidence 35788999999999988777766444321 011246788889877431 122578888
No 447
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=39.54 E-value=19 Score=28.21 Aligned_cols=25 Identities=4% Similarity=-0.047 Sum_probs=12.2
Q ss_pred ccccCCcEEEEeecChhhHHHHHHH
Q 040927 4 SNQVHYSMGEATTKDEKRGLAAVEK 28 (147)
Q Consensus 4 ~l~~~G~~v~l~~r~~~~~~~~~~~ 28 (147)
.|++.|++|++++|+.++.+++.++
T Consensus 397 ~L~~~G~~V~i~nR~~e~a~~la~~ 421 (529)
T PLN02520 397 GAKEKGARVVIANRTYERAKELADA 421 (529)
T ss_pred HHHHCCCEEEEEcCCHHHHHHHHHH
Confidence 3444555555555554444444333
No 448
>PTZ00314 inosine-5'-monophosphate dehydrogenase; Provisional
Probab=39.20 E-value=77 Score=24.76 Aligned_cols=29 Identities=21% Similarity=0.198 Sum_probs=12.8
Q ss_pred HHHHHHhcCCCceEEEEecCCCHHHHHHHH
Q 040927 25 AVEKLKNSGCDNVIFHLLDVTDPASVDSLV 54 (147)
Q Consensus 25 ~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~ 54 (147)
.+++++...+ .+.+...++.+.++...+.
T Consensus 272 ~i~~ik~~~~-~~~v~aG~V~t~~~a~~~~ 300 (495)
T PTZ00314 272 MIKKLKSNYP-HVDIIAGNVVTADQAKNLI 300 (495)
T ss_pred HHHHHHhhCC-CceEEECCcCCHHHHHHHH
Confidence 3444444332 2444444555555544443
No 449
>COG1609 PurR Transcriptional regulators [Transcription]
Probab=39.16 E-value=1.5e+02 Score=21.59 Aligned_cols=26 Identities=19% Similarity=0.151 Sum_probs=15.1
Q ss_pred hhhHHHHHHHHHHhhccCCCCeEEEEcCCC
Q 040927 93 YYGNKRMCEALIPLLQLSDSPRIVNASSSM 122 (147)
Q Consensus 93 ~~~~~~l~~~~~~~l~~~~~~~iv~isS~~ 122 (147)
..+...+++. +.+.+..+|.+++...
T Consensus 160 ~~~~~~a~~~----L~~~G~~~i~~i~~~~ 185 (333)
T COG1609 160 FAGAYLATEH----LIELGHRRIAFIGGPL 185 (333)
T ss_pred HHHHHHHHHH----HHHCCCceEEEEeCCC
Confidence 3444444444 4444556788888754
No 450
>PRK06114 short chain dehydrogenase; Provisional
Probab=39.11 E-value=1.2e+02 Score=20.61 Aligned_cols=53 Identities=11% Similarity=0.109 Sum_probs=35.7
Q ss_pred cccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhh
Q 040927 5 NQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQ 60 (147)
Q Consensus 5 l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 60 (147)
+.-.|..+++++-+..-...+...+.+.|. .++.+|-++.+..+++.+++.+.
T Consensus 4 ~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~---~v~~~~r~~~~~~~~~~~~l~~~ 56 (254)
T PRK06114 4 FDLDGQVAFVTGAGSGIGQRIAIGLAQAGA---DVALFDLRTDDGLAETAEHIEAA 56 (254)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCC---EEEEEeCCcchHHHHHHHHHHhc
Confidence 334577888888888888888888887764 34445655555556666665443
No 451
>TIGR03599 YloV DAK2 domain fusion protein YloV. This model describes a protein family that contains an N-terminal DAK2 domain (pfam02734), so named because of similarity to the dihydroxyacetone kinase family family. The GTP-binding protein CgtA (a member of the obg family) is a bacterial GTPase associated with ribosome biogenesis, and it has a characteristic extension (TIGR03595) in certain lineages. This protein family described here was found, by the method of partial phylognetic profiling, to have a phylogenetic distribution strongly correlated to that of TIGR03595. This correlation implies some form of functional coupling.
Probab=39.03 E-value=2e+02 Score=22.88 Aligned_cols=59 Identities=12% Similarity=0.178 Sum_probs=41.4
Q ss_pred CcEEEEeecChh-hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 9 YSMGEATTKDEK-RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 9 G~~v~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
+-+++.++.+.. .+.++++.+-..+++-++++..+-.+++..+.+.+.+.++|+.+++-
T Consensus 455 ~~~i~~~~~d~~~~~~~ll~~l~~~~~elvTi~~G~~~~~~~~~~l~~~i~~~~~~veve 514 (530)
T TIGR03599 455 DGKIIAVGKDPEDAAKKLLDKLLDEDSELITIFYGEDATEEEAEELEAFIEEKYPDVEVE 514 (530)
T ss_pred CCeEEEecCCHHHHHHHHHHHHhcCCCeEEEEEECCCCCHHHHHHHHHHHHhhCCCcEEE
Confidence 445666666643 35566666666565456777776666778999999999998888776
No 452
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=39.00 E-value=1e+02 Score=20.69 Aligned_cols=39 Identities=18% Similarity=-0.034 Sum_probs=31.5
Q ss_pred cCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCC
Q 040927 7 VHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVT 45 (147)
Q Consensus 7 ~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~ 45 (147)
....+|+...|+++.++.+..-++..+.+++..+..|..
T Consensus 56 ~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap 94 (187)
T COG2242 56 GPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAP 94 (187)
T ss_pred CCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccch
Confidence 566789999999988888888887777667888888764
No 453
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=38.91 E-value=1e+02 Score=19.60 Aligned_cols=52 Identities=13% Similarity=0.227 Sum_probs=33.6
Q ss_pred cCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCC
Q 040927 7 VHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGK 63 (147)
Q Consensus 7 ~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 63 (147)
..|--+.+.++..-...++++.+.+.| +-..+..|++.+-+. ++++...|+.
T Consensus 50 L~G~~l~l~S~R~~~~~evi~~I~~~G--~PviVAtDV~p~P~~---V~Kia~~f~A 101 (138)
T PF04312_consen 50 LDGELLDLKSSRNMSRSEVIEWISEYG--KPVIVATDVSPPPET---VKKIARSFNA 101 (138)
T ss_pred cCCcEEEEEeecCCCHHHHHHHHHHcC--CEEEEEecCCCCcHH---HHHHHHHhCC
Confidence 345445555544445567888888887 468888999876433 5666665553
No 454
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=38.82 E-value=1.3e+02 Score=22.34 Aligned_cols=68 Identities=16% Similarity=0.037 Sum_probs=36.9
Q ss_pred CccccccCCcEEEEeecChhh---HHHHHHHHHhcCCCceEEEEe-cCCCHHHH-HHHHHHHHhhcCCccEE----ecCC
Q 040927 1 MKRSNQVHYSMGEATTKDEKR---GLAAVEKLKNSGCDNVIFHLL-DVTDPASV-DSLVHFVSSQFGKLDIL----GGLP 71 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~---~~~~~~~l~~~~~~~~~~~~~-D~~~~~~~-~~~~~~~~~~~g~id~l----ag~~ 71 (147)
||++|.++|.+|++...+.-. .+++...-+..| +.++.. .=+||.++ -..++..+. ..+|++ ||..
T Consensus 159 LA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er~g---v~vI~~~~G~DpAaVafDAi~~Aka--r~~DvvliDTAGRL 233 (340)
T COG0552 159 LAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGERLG---VPVISGKEGADPAAVAFDAIQAAKA--RGIDVVLIDTAGRL 233 (340)
T ss_pred HHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhC---CeEEccCCCCCcHHHHHHHHHHHHH--cCCCEEEEeCcccc
Confidence 467788999999998876533 222222222233 333332 45666653 223333333 378888 7865
Q ss_pred Cc
Q 040927 72 DN 73 (147)
Q Consensus 72 ~~ 73 (147)
..
T Consensus 234 hn 235 (340)
T COG0552 234 HN 235 (340)
T ss_pred cC
Confidence 33
No 455
>TIGR01182 eda Entner-Doudoroff aldolase. 2-deydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) is an enzyme of the Entner-Doudoroff pathway. This aldolase has another function, 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) shown experimentally in Escherichia coli and Pseudomonas putida
Probab=38.81 E-value=79 Score=21.52 Aligned_cols=43 Identities=12% Similarity=0.213 Sum_probs=23.8
Q ss_pred cChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCC
Q 040927 17 KDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGK 63 (147)
Q Consensus 17 r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 63 (147)
.+.+...++.+.+.+.| +..+...++++. ..+.++++.++++.
T Consensus 17 ~~~e~a~~~~~al~~~G---i~~iEit~~t~~-a~~~i~~l~~~~~~ 59 (204)
T TIGR01182 17 DDVDDALPLAKALIEGG---LRVLEVTLRTPV-ALDAIRLLRKEVPD 59 (204)
T ss_pred CCHHHHHHHHHHHHHcC---CCEEEEeCCCcc-HHHHHHHHHHHCCC
Confidence 34455555555555443 455666666654 33456677666653
No 456
>PRK03522 rumB 23S rRNA methyluridine methyltransferase; Reviewed
Probab=38.65 E-value=47 Score=24.02 Aligned_cols=42 Identities=19% Similarity=0.056 Sum_probs=30.6
Q ss_pred ccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCC
Q 040927 4 SNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVT 45 (147)
Q Consensus 4 ~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~ 45 (147)
.++..|.+|+.++.+...++.+.+.++..+-.++.++..|+.
T Consensus 190 ~la~~~~~V~gvD~s~~av~~A~~n~~~~~l~~v~~~~~D~~ 231 (315)
T PRK03522 190 HCATPGMQLTGIEISAEAIACAKQSAAELGLTNVQFQALDST 231 (315)
T ss_pred HHHhcCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEEcCHH
Confidence 456778889999999888877776666555335777777764
No 457
>PRK12557 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein; Provisional
Probab=38.53 E-value=1.4e+02 Score=22.03 Aligned_cols=21 Identities=5% Similarity=-0.277 Sum_probs=17.1
Q ss_pred CccccccCCcEEEEeecChhh
Q 040927 1 MKRSNQVHYSMGEATTKDEKR 21 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~~~ 21 (147)
|+..|++.|++|++.+|+.+.
T Consensus 35 MA~~La~aG~~V~v~Dr~~~~ 55 (342)
T PRK12557 35 MAIEFAEAGHDVVLAEPNRSI 55 (342)
T ss_pred HHHHHHhCCCeEEEEECCHHH
Confidence 356788899999999998764
No 458
>KOG0820 consensus Ribosomal RNA adenine dimethylase [RNA processing and modification]
Probab=38.50 E-value=35 Score=24.57 Aligned_cols=46 Identities=7% Similarity=-0.126 Sum_probs=31.7
Q ss_pred cccccCCcEEEEeecChhhHHHHHHHHHhcC-CCceEEEEecCCCHH
Q 040927 3 RSNQVHYSMGEATTKDEKRGLAAVEKLKNSG-CDNVIFHLLDVTDPA 48 (147)
Q Consensus 3 ~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~ 48 (147)
..|.+.|.+|+.+-.+.-...++.+..+..+ ..+..++.||+-..+
T Consensus 74 ~~lLe~~kkVvA~E~Dprmvael~krv~gtp~~~kLqV~~gD~lK~d 120 (315)
T KOG0820|consen 74 VKLLEAGKKVVAVEIDPRMVAELEKRVQGTPKSGKLQVLHGDFLKTD 120 (315)
T ss_pred HHHHHhcCeEEEEecCcHHHHHHHHHhcCCCccceeeEEecccccCC
Confidence 4577889999999888766666666665443 125778888865543
No 459
>COG4301 Uncharacterized conserved protein [Function unknown]
Probab=38.49 E-value=1.5e+02 Score=21.30 Aligned_cols=49 Identities=10% Similarity=0.259 Sum_probs=27.3
Q ss_pred ecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccE
Q 040927 16 TKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDI 66 (147)
Q Consensus 16 ~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 66 (147)
+.+..+...+.+.+...+. -..+++.|++- .-++...+.+...++.+.+
T Consensus 87 sGns~Ktr~Llda~~~~~~-~~ryvpiDv~a-~iL~~ta~ai~~~y~~l~v 135 (321)
T COG4301 87 SGNSTKTRILLDALAHRGS-LLRYVPIDVSA-SILRATATAILREYPGLEV 135 (321)
T ss_pred CCccHHHHHHHHHhhhcCC-cceeeeecccH-HHHHHHHHHHHHhCCCCeE
Confidence 3455566666666665554 36677777762 3344445555555555444
No 460
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=38.30 E-value=25 Score=27.43 Aligned_cols=25 Identities=4% Similarity=-0.251 Sum_probs=20.2
Q ss_pred ccccccCCcEEEEeecChhhHHHHH
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAV 26 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~ 26 (147)
+..++..|+.|.+.+++.+.+++..
T Consensus 21 A~~la~aG~~V~l~d~~~e~l~~~~ 45 (503)
T TIGR02279 21 AQVAASAGHQVLLYDIRAEALARAI 45 (503)
T ss_pred HHHHHhCCCeEEEEeCCHHHHHHHH
Confidence 5567889999999999988776543
No 461
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=38.15 E-value=25 Score=27.42 Aligned_cols=25 Identities=8% Similarity=-0.223 Sum_probs=20.4
Q ss_pred ccccccCCcEEEEeecChhhHHHHH
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAV 26 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~ 26 (147)
+..++..|+.|++.+++.+.+++..
T Consensus 23 A~~la~aG~~V~l~D~~~e~l~~~~ 47 (507)
T PRK08268 23 AQVAAQAGHTVLLYDARAGAAAAAR 47 (507)
T ss_pred HHHHHhCCCeEEEEeCCHHHHHHHH
Confidence 5567889999999999988777643
No 462
>PRK07476 eutB threonine dehydratase; Provisional
Probab=38.04 E-value=91 Score=22.63 Aligned_cols=62 Identities=10% Similarity=-0.003 Sum_probs=26.8
Q ss_pred cccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEe-cCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 5 NQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLL-DVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 5 l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~-D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
+...|++|+.+..+.+...+...++....+ ....... +-...+....+..++.++.+.+|.+
T Consensus 109 ~~~~GA~V~~~~~~~~~~~~~a~~~~~~~g-~~~~~~~~n~~~~~g~~t~~~Ei~~Q~~~~d~i 171 (322)
T PRK07476 109 IRALGAEVRIVGRSQDDAQAEVERLVREEG-LTMVPPFDDPRIIAGQGTIGLEILEALPDVATV 171 (322)
T ss_pred HHHcCCEEEEECCCHHHHHHHHHHHHHhcC-CEEeCCCCCcceeechhHHHHHHHHhCcCCCEE
Confidence 334577777666543333233333322211 1221111 1122233345556666666556665
No 463
>TIGR01303 IMP_DH_rel_1 IMP dehydrogenase family protein. This model represents a family of proteins, often annotated as a putative IMP dehydrogenase, related to IMP dehydrogenase and GMP reductase and restricted to the high GC Gram-positive bacteria. All species in which a member is found so far (Corynebacterium glutamicum, Mycobacterium tuberculosis, Streptomyces coelicolor, etc.) also have IMP dehydrogenase as described by TIGRFAMs entry TIGR01302.
Probab=37.95 E-value=1.2e+02 Score=23.57 Aligned_cols=58 Identities=10% Similarity=0.032 Sum_probs=37.3
Q ss_pred cccccCCcEEEEeecCh---hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 3 RSNQVHYSMGEATTKDE---KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 3 ~~l~~~G~~v~l~~r~~---~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
..|.+.|.++++++-.. ....++++.++.... ++.++..++.+.+....+.+. ..|++
T Consensus 231 ~~Lv~aGVd~i~~D~a~g~~~~~~~~i~~i~~~~~-~~~vi~g~~~t~~~~~~l~~~------G~d~i 291 (475)
T TIGR01303 231 KALLDAGVDVLVIDTAHGHQVKMISAIKAVRALDL-GVPIVAGNVVSAEGVRDLLEA------GANII 291 (475)
T ss_pred HHHHHhCCCEEEEeCCCCCcHHHHHHHHHHHHHCC-CCeEEEeccCCHHHHHHHHHh------CCCEE
Confidence 45677888887776432 345566677776554 366666668888777766532 56776
No 464
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=37.48 E-value=27 Score=24.98 Aligned_cols=32 Identities=9% Similarity=-0.087 Sum_probs=22.3
Q ss_pred cccccCCcEEEE-eecChhhHHHHHHHHHhcCC
Q 040927 3 RSNQVHYSMGEA-TTKDEKRGLAAVEKLKNSGC 34 (147)
Q Consensus 3 ~~l~~~G~~v~l-~~r~~~~~~~~~~~l~~~~~ 34 (147)
+.+.++|.+|++ ++|++..-+.+.+.|...|-
T Consensus 155 ~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy 187 (275)
T TIGR01680 155 NKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGY 187 (275)
T ss_pred HHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCC
Confidence 345678998555 57777666778888877653
No 465
>PRK05458 guanosine 5'-monophosphate oxidoreductase; Provisional
Probab=37.45 E-value=1.1e+02 Score=22.54 Aligned_cols=50 Identities=10% Similarity=-0.020 Sum_probs=28.1
Q ss_pred ccccCCc--EEEEeecC---hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHH
Q 040927 4 SNQVHYS--MGEATTKD---EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLV 54 (147)
Q Consensus 4 ~l~~~G~--~v~l~~r~---~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~ 54 (147)
.|.+.|. +++.++-. ...+.+++++++...+ .+.++..|+.+.+....+.
T Consensus 104 ~Lv~ag~~~d~i~iD~a~gh~~~~~e~I~~ir~~~p-~~~vi~g~V~t~e~a~~l~ 158 (326)
T PRK05458 104 QLAAEGLTPEYITIDIAHGHSDSVINMIQHIKKHLP-ETFVIAGNVGTPEAVRELE 158 (326)
T ss_pred HHHhcCCCCCEEEEECCCCchHHHHHHHHHHHhhCC-CCeEEEEecCCHHHHHHHH
Confidence 3444533 66666543 2345556666666554 3556666777766665544
No 466
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=37.45 E-value=24 Score=23.06 Aligned_cols=28 Identities=11% Similarity=-0.027 Sum_probs=18.0
Q ss_pred cCCcEEEEeecChhhHHHHHHHHHhcCC
Q 040927 7 VHYSMGEATTKDEKRGLAAVEKLKNSGC 34 (147)
Q Consensus 7 ~~G~~v~l~~r~~~~~~~~~~~l~~~~~ 34 (147)
-.|.+|++++...--...+.+.|...+.
T Consensus 42 l~gk~vlViG~G~~~G~~~a~~L~~~g~ 69 (168)
T cd01080 42 LAGKKVVVVGRSNIVGKPLAALLLNRNA 69 (168)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhhCCC
Confidence 4678888888865334446666666554
No 467
>PF09445 Methyltransf_15: RNA cap guanine-N2 methyltransferase; InterPro: IPR019012 RNA cap guanine-N2 methyltransferases such as Schizosaccharomyces pombe (Fission yeast) trimethylguanosine synthase (Tgs1) and Giardia lamblia (Giardia intestinalis) Tgs2, catalyse the methylation step(s) for the conversion of the 7-monomethylguanosine (m(7)G) caps of snRNAs and snoRNAs to a 2,2,7-trimethylguanosine (m(2,2,7)G) cap structure [, , ]. Trimethylguanosine synthase is specific for guanine, and N7 methylation must precede N2 methylation. This enzyme is required for pre-mRNA splicing, pre-rRNA processing and small ribosomal subunit synthesis. As such, this enzyme plays a role in transcriptional regulation. ; GO: 0008168 methyltransferase activity, 0001510 RNA methylation, 0009452 RNA capping; PDB: 3EGI_B 3GDH_A.
Probab=37.17 E-value=59 Score=21.26 Aligned_cols=43 Identities=21% Similarity=0.099 Sum_probs=30.4
Q ss_pred ccccCCcEEEEeecChhhHHHHHHHHHhcC-CCceEEEEecCCC
Q 040927 4 SNQVHYSMGEATTKDEKRGLAAVEKLKNSG-CDNVIFHLLDVTD 46 (147)
Q Consensus 4 ~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~ 46 (147)
+|++.+.+|+.+..+..+++-+..-.+-.| ..++.++.+|..+
T Consensus 16 qFA~~~~~Viaidid~~~~~~a~hNa~vYGv~~~I~~i~gD~~~ 59 (163)
T PF09445_consen 16 QFARTFDRVIAIDIDPERLECAKHNAEVYGVADNIDFICGDFFE 59 (163)
T ss_dssp HHHHTT-EEEEEES-HHHHHHHHHHHHHTT-GGGEEEEES-HHH
T ss_pred HHHHhCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCCHHH
Confidence 577788899999999988777766666665 2368999988754
No 468
>COG1832 Predicted CoA-binding protein [General function prediction only]
Probab=37.07 E-value=1.1e+02 Score=19.48 Aligned_cols=61 Identities=5% Similarity=-0.091 Sum_probs=33.6
Q ss_pred cccccCCcEEEEeec--Chh--hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 3 RSNQVHYSMGEATTK--DEK--RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 3 ~~l~~~G~~v~l~~r--~~~--~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
+.|.++|++|+=+.- ..+ -.++....|.+.+. .+..+.. +..++.+...++++.+. .+.++
T Consensus 37 kyL~~~GY~ViPVNP~~~~~eiLG~k~y~sL~dIpe-~IDiVdv-FR~~e~~~~i~~eal~~--~~kv~ 101 (140)
T COG1832 37 KYLQQKGYRVIPVNPKLAGEEILGEKVYPSLADIPE-PIDIVDV-FRRSEAAPEVAREALEK--GAKVV 101 (140)
T ss_pred HHHHHCCCEEEeeCcccchHHhcCchhhhcHHhCCC-CCcEEEE-ecChhhhHHHHHHHHhh--CCCeE
Confidence 457778888887765 211 24445555555442 3444333 34456666666666654 25555
No 469
>PRK08198 threonine dehydratase; Provisional
Probab=36.98 E-value=1.5e+02 Score=22.32 Aligned_cols=62 Identities=11% Similarity=0.025 Sum_probs=33.2
Q ss_pred cccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEec-CCCHHHHHHHHHHHHhhcCCccEE
Q 040927 5 NQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLD-VTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 5 l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D-~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
+...|++|+++..+.+...+...++.+..+ .......| -...+.-..+..++.++.+.+|.+
T Consensus 112 ~~~~GA~Vi~~~~~~~~~~~~a~~~~~~~g-~~~~~~~~~~~~~~g~~t~a~EI~~q~~~~d~v 174 (404)
T PRK08198 112 TRSYGAEVVLHGDVYDEALAKAQELAEETG-ATFVHPFDDPDVIAGQGTIGLEILEDLPDVDTV 174 (404)
T ss_pred HHhCCCEEEEECCCHHHHHHHHHHHHHhcC-CEecCCCCCccHHHHHHHHHHHHHHhCCCCCEE
Confidence 345689999887654444333444433322 12222222 222333345667777777778877
No 470
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=36.92 E-value=1.5e+02 Score=21.05 Aligned_cols=51 Identities=14% Similarity=0.116 Sum_probs=36.3
Q ss_pred cCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhh
Q 040927 7 VHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQ 60 (147)
Q Consensus 7 ~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 60 (147)
-.|..+++++-+..-...+..++...|. .++.+|..+.+..+++.+++...
T Consensus 10 l~~k~~lVTGas~gIG~~ia~~L~~~Ga---~Vv~~~~~~~~~~~~~~~~i~~~ 60 (306)
T PRK07792 10 LSGKVAVVTGAAAGLGRAEALGLARLGA---TVVVNDVASALDASDVLDEIRAA 60 (306)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC---EEEEecCCchhHHHHHHHHHHhc
Confidence 4577888998888888888888887764 34445666666666777776543
No 471
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=36.76 E-value=39 Score=23.60 Aligned_cols=24 Identities=29% Similarity=0.108 Sum_probs=14.9
Q ss_pred cEEEEeecChhhHHHHHHHHHhcC
Q 040927 10 SMGEATTKDEKRGLAAVEKLKNSG 33 (147)
Q Consensus 10 ~~v~l~~r~~~~~~~~~~~l~~~~ 33 (147)
.+|++++.+.+.++...+.+...+
T Consensus 76 g~v~~~D~s~~ML~~a~~k~~~~~ 99 (238)
T COG2226 76 GEVVGLDISESMLEVAREKLKKKG 99 (238)
T ss_pred ceEEEEECCHHHHHHHHHHhhccC
Confidence 456677777766666666655443
No 472
>cd06292 PBP1_LacI_like_10 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=36.51 E-value=1.4e+02 Score=20.39 Aligned_cols=55 Identities=15% Similarity=-0.048 Sum_probs=26.0
Q ss_pred cccCCcEEEEeec--ChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHh
Q 040927 5 NQVHYSMGEATTK--DEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSS 59 (147)
Q Consensus 5 l~~~G~~v~l~~r--~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 59 (147)
+.+.|+++++... +.+...+..+.+.....+.+.+..+...+.......+..+.+
T Consensus 25 ~~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~i~~~~~ 81 (273)
T cd06292 25 LAQYGYTVLLCNTYRGGVSEADYVEDLLARGVRGVVFISSLHADTHADHSHYERLAE 81 (273)
T ss_pred HHHCCCEEEEEeCCCChHHHHHHHHHHHHcCCCEEEEeCCCCCcccchhHHHHHHHh
Confidence 4457888766543 333344555555554432233333333333334444455443
No 473
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=36.19 E-value=1.5e+02 Score=20.77 Aligned_cols=36 Identities=17% Similarity=0.112 Sum_probs=26.5
Q ss_pred cEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCC
Q 040927 10 SMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVT 45 (147)
Q Consensus 10 ~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~ 45 (147)
..|+.++.+...++.+.+.++..+..++.++..|..
T Consensus 97 g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~D~~ 132 (264)
T TIGR00446 97 GAIVANEFSKSRTKVLIANINRCGVLNVAVTNFDGR 132 (264)
T ss_pred CEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecCCHH
Confidence 378889999988888888887666434666666653
No 474
>COG1512 Beta-propeller domains of methanol dehydrogenase type [General function prediction only]
Probab=36.18 E-value=87 Score=22.41 Aligned_cols=43 Identities=5% Similarity=0.046 Sum_probs=34.5
Q ss_pred hhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhc
Q 040927 19 EKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQF 61 (147)
Q Consensus 19 ~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 61 (147)
...+++-.+.|.++....+.++..+-++.++++....++.+++
T Consensus 48 ~~~Leq~l~~L~~kt~~QiaVv~vpSt~g~~IE~ya~rlfd~W 90 (271)
T COG1512 48 RGALEQQLADLEQKTGAQIAVVTVPSTGGETIEQYATRLFDKW 90 (271)
T ss_pred HHHHHHHHHHHHhccCCeEEEEEecCCCCCCHHHHHHHHHHhc
Confidence 4567777778877766568888899999999999998888873
No 475
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=36.03 E-value=2e+02 Score=21.96 Aligned_cols=58 Identities=5% Similarity=0.014 Sum_probs=35.2
Q ss_pred cEEEEeecChh-hHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 10 SMGEATTKDEK-RGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 10 ~~v~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
..|++...|++ .++++++.+.+..-++.+++.+|=.+.++..+.+++..++++.+.++
T Consensus 77 vsViIP~yNE~~~i~~~l~sll~q~yp~~eIivVdDgs~D~t~~~~~~~~~~~~~v~vv 135 (444)
T PRK14583 77 VSILVPCFNEGLNARETIHAALAQTYTNIEVIAINDGSSDDTAQVLDALLAEDPRLRVI 135 (444)
T ss_pred EEEEEEeCCCHHHHHHHHHHHHcCCCCCeEEEEEECCCCccHHHHHHHHHHhCCCEEEE
Confidence 44677777754 46666666654432256777776555566666667766665556555
No 476
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=35.96 E-value=1e+02 Score=22.35 Aligned_cols=63 Identities=16% Similarity=0.016 Sum_probs=32.2
Q ss_pred cccCCcEEEEeecC-hhhHHHHHHHHHhcCCCceEEEEe-cCCCHHHHHHHHHHHHhhcCC---ccEE
Q 040927 5 NQVHYSMGEATTKD-EKRGLAAVEKLKNSGCDNVIFHLL-DVTDPASVDSLVHFVSSQFGK---LDIL 67 (147)
Q Consensus 5 l~~~G~~v~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~~-D~~~~~~~~~~~~~~~~~~g~---id~l 67 (147)
+...|++|+.+..+ .+...+...++.+..+........ +-...+.-..+..++.++.+. +|.+
T Consensus 93 l~~~GA~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~n~~~~~g~~t~~~Ei~~q~~~~~~~D~v 160 (316)
T cd06448 93 LRDEGATVVVHGKVWWEADNYLREELAENDPGPVYVHPFDDPLIWEGHSSMVDEIAQQLQSQEKVDAI 160 (316)
T ss_pred HHHcCCEEEEECCchHHHHHHHHHHHHhccCCcEEeCCCCCchhhccccHHHHHHHHHccccCCCCEE
Confidence 44568888888766 444445555555443111222111 112222334456677666653 7877
No 477
>TIGR01124 ilvA_2Cterm threonine ammonia-lyase, biosynthetic, long form. Forms scoring between the trusted and noise cutoff tend to branch with this subgroup of threonine ammonia-lyase phylogenetically but have only a single copy of the C-terminal domain.
Probab=35.86 E-value=1.4e+02 Score=23.48 Aligned_cols=60 Identities=15% Similarity=0.054 Sum_probs=34.8
Q ss_pred cccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHH---HHHHHHHHHHhhcC-CccEE
Q 040927 5 NQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPA---SVDSLVHFVSSQFG-KLDIL 67 (147)
Q Consensus 5 l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~---~~~~~~~~~~~~~g-~id~l 67 (147)
+...|++|++++.+.+...+...++....+ .....+. .|+. .-..+..++.++.+ .+|.+
T Consensus 107 ~r~~GA~Vvl~g~~~d~a~~~a~~la~~~g-~~~i~p~--~~~~~i~G~gtig~EI~~q~~~~~D~v 170 (499)
T TIGR01124 107 VRGFGGEVVLHGANFDDAKAKAIELSQEKG-LTFIHPF--DDPLVIAGQGTLALEILRQVANPLDAV 170 (499)
T ss_pred HHhCCCEEEEeCcCHHHHHHHHHHHHHhcC-CEeeCCC--CChHHHHhhHHHHHHHHHhCCCCCCEE
Confidence 445699999998776555555555554433 2333333 2333 23445566777765 68888
No 478
>cd04731 HisF The cyclase subunit of imidazoleglycerol phosphate synthase (HisF). Imidazole glycerol phosphate synthase (IGPS) catalyzes the fifth step of histidine biosynthesis, the formation of the imidazole ring. IGPS converts N1-(5'-phosphoribulosyl)-formimino-5-aminoimidazole-4-carboxamide ribonucleotide (PRFAR) to imidazole glycerol phosphate (ImGP) and 5'-(5-aminoimidazole-4-carboxamide) ribonucleotide (AICAR). This conversion involves two tightly coupled reactions in distinct active sites of IGPS. The two catalytic domains can be fused, like in fungi and plants, or peformed by a heterodimer (HisH-glutaminase and HisF-cyclase), like in bacteria.
Probab=35.73 E-value=1.4e+02 Score=20.51 Aligned_cols=25 Identities=12% Similarity=0.050 Sum_probs=13.9
Q ss_pred EEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 38 IFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 38 ~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
.+...++.+++++.++... +.+|.+
T Consensus 196 via~GGi~~~~di~~~l~~-----~g~dgv 220 (243)
T cd04731 196 VIASGGAGKPEHFVEAFEE-----GGADAA 220 (243)
T ss_pred EEEeCCCCCHHHHHHHHHh-----CCCCEE
Confidence 4455566666666555432 345555
No 479
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=35.50 E-value=1.3e+02 Score=19.77 Aligned_cols=50 Identities=10% Similarity=0.218 Sum_probs=27.1
Q ss_pred ChhhHHHHHHHHHhcCC-CceEEEEecCCCHHHHHHHHHHHHhhcCCccEE
Q 040927 18 DEKRGLAAVEKLKNSGC-DNVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL 67 (147)
Q Consensus 18 ~~~~~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 67 (147)
....+.++++.+..... ....++.+|=.+.+.....+++..+..+.+.++
T Consensus 8 ~~~~l~~~l~sl~~q~~~~~~eiiiVDd~S~d~t~~~~~~~~~~~~~i~~~ 58 (224)
T cd06442 8 ERENIPELIERLDAALKGIDYEIIVVDDNSPDGTAEIVRELAKEYPRVRLI 58 (224)
T ss_pred hhhhHHHHHHHHHHhhcCCCeEEEEEeCCCCCChHHHHHHHHHhCCceEEE
Confidence 34456677776654321 235666665544555566666665554444444
No 480
>TIGR00677 fadh2_euk methylenetetrahydrofolate reductase, eukaryotic type. This protein is an FAD-containing flavoprotein.
Probab=35.50 E-value=94 Score=22.24 Aligned_cols=55 Identities=16% Similarity=0.097 Sum_probs=32.7
Q ss_pred CcEEEEe----ecChhhHHHHHHHHHhcCCCceEEEEecCCC-----------HHHHHHHHHHHHhhcCC
Q 040927 9 YSMGEAT----TKDEKRGLAAVEKLKNSGCDNVIFHLLDVTD-----------PASVDSLVHFVSSQFGK 63 (147)
Q Consensus 9 G~~v~l~----~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-----------~~~~~~~~~~~~~~~g~ 63 (147)
|..++.. +++...++..+..+...|-.++..+..|-.. .+....+++.+++.++.
T Consensus 59 g~~~i~Hltcr~~~~~~l~~~L~~~~~~Gi~niLal~GD~p~~~~~~~~~~~~f~~a~~Li~~i~~~~~~ 128 (281)
T TIGR00677 59 GVETCMHLTCTNMPIEMIDDALERAYSNGIQNILALRGDPPHIGDDWTEVEGGFQYAVDLVKYIRSKYGD 128 (281)
T ss_pred CCCeeEEeccCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCcCHHHHHHHHHHhCCC
Confidence 7775443 3455566666666667776567777777631 13355666776665554
No 481
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=35.43 E-value=15 Score=24.35 Aligned_cols=23 Identities=13% Similarity=-0.123 Sum_probs=16.5
Q ss_pred ccccccCCcEEEEeecChhhHHH
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLA 24 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~ 24 (147)
+-.|++.|++|+.++.+.+..+.
T Consensus 16 A~~lA~~G~~V~g~D~~~~~v~~ 38 (185)
T PF03721_consen 16 AAALAEKGHQVIGVDIDEEKVEA 38 (185)
T ss_dssp HHHHHHTTSEEEEE-S-HHHHHH
T ss_pred HHHHHhCCCEEEEEeCChHHHHH
Confidence 44688999999999999875544
No 482
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=35.33 E-value=1.3e+02 Score=19.61 Aligned_cols=56 Identities=5% Similarity=-0.057 Sum_probs=33.4
Q ss_pred cEEEEeecCh-hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHHhhcCCcc
Q 040927 10 SMGEATTKDE-KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVSSQFGKLD 65 (147)
Q Consensus 10 ~~v~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 65 (147)
..|++...+. ..+.++++.+....-....++.+|=...+...+.+++....++.++
T Consensus 3 vsviip~~n~~~~l~~~L~sl~~q~~~~~eiivVdd~s~d~t~~~~~~~~~~~~~~~ 59 (196)
T cd02520 3 VSILKPLCGVDPNLYENLESFFQQDYPKYEILFCVQDEDDPAIPVVRKLIAKYPNVD 59 (196)
T ss_pred eEEEEecCCCCccHHHHHHHHHhccCCCeEEEEEeCCCcchHHHHHHHHHHHCCCCc
Confidence 3566766654 4577777777654322467766655545555666677666655444
No 483
>PTZ00338 dimethyladenosine transferase-like protein; Provisional
Probab=35.16 E-value=42 Score=24.14 Aligned_cols=44 Identities=11% Similarity=-0.090 Sum_probs=30.9
Q ss_pred cccccCCcEEEEeecChhhHHHHHHHHHhcC-CCceEEEEecCCC
Q 040927 3 RSNQVHYSMGEATTKDEKRGLAAVEKLKNSG-CDNVIFHLLDVTD 46 (147)
Q Consensus 3 ~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~ 46 (147)
..+++.+.+|+.+..+....+.+.+.+...+ ..++.++..|+.+
T Consensus 52 ~~Ll~~~~~V~avEiD~~li~~l~~~~~~~~~~~~v~ii~~Dal~ 96 (294)
T PTZ00338 52 EKLLQLAKKVIAIEIDPRMVAELKKRFQNSPLASKLEVIEGDALK 96 (294)
T ss_pred HHHHHhCCcEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECCHhh
Confidence 3456667789999999877777766665433 2358888888764
No 484
>KOG2730 consensus Methylase [General function prediction only]
Probab=35.05 E-value=37 Score=23.69 Aligned_cols=49 Identities=20% Similarity=0.038 Sum_probs=34.6
Q ss_pred ccccCCcEEEEeecChhhHHHHHHHHHhcCC-CceEEEEecCCCHHHHHH
Q 040927 4 SNQVHYSMGEATTKDEKRGLAAVEKLKNSGC-DNVIFHLLDVTDPASVDS 52 (147)
Q Consensus 4 ~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~ 52 (147)
+++.+|..|+.++-++.+..-+..-++-.|- ++++++..|+-|..+..+
T Consensus 111 qfa~~~~~VisIdiDPikIa~AkhNaeiYGI~~rItFI~GD~ld~~~~lq 160 (263)
T KOG2730|consen 111 QFALQGPYVIAIDIDPVKIACARHNAEVYGVPDRITFICGDFLDLASKLK 160 (263)
T ss_pred HHHHhCCeEEEEeccHHHHHHHhccceeecCCceeEEEechHHHHHHHHh
Confidence 5678899999999998776655555544442 368899999876554433
No 485
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=34.97 E-value=1.7e+02 Score=22.84 Aligned_cols=73 Identities=15% Similarity=0.172 Sum_probs=42.9
Q ss_pred ceEEEEecCCCHHHHHH--HHHHHHhhcCCccEE---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccC
Q 040927 36 NVIFHLLDVTDPASVDS--LVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLS 110 (147)
Q Consensus 36 ~~~~~~~D~~~~~~~~~--~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~ 110 (147)
++..+.+|+++++-=-+ -.+.+ ...+|++ |+.... .+-++..+.+|.+|+..+.+.+.....-
T Consensus 80 Kv~pi~GDi~~~~LGis~~D~~~l---~~eV~ivih~AAtvrF--------de~l~~al~iNt~Gt~~~l~lak~~~~l- 147 (467)
T KOG1221|consen 80 KVVPIAGDISEPDLGISESDLRTL---ADEVNIVIHSAATVRF--------DEPLDVALGINTRGTRNVLQLAKEMVKL- 147 (467)
T ss_pred cceeccccccCcccCCChHHHHHH---HhcCCEEEEeeeeecc--------chhhhhhhhhhhHhHHHHHHHHHHhhhh-
Confidence 46667777776531111 11111 1357777 444322 1345778899999999999998765432
Q ss_pred CCCeEEEEcCCC
Q 040927 111 DSPRIVNASSSM 122 (147)
Q Consensus 111 ~~~~iv~isS~~ 122 (147)
...+.+|..-
T Consensus 148 --~~~vhVSTAy 157 (467)
T KOG1221|consen 148 --KALVHVSTAY 157 (467)
T ss_pred --heEEEeehhh
Confidence 3477777644
No 486
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=34.94 E-value=33 Score=25.09 Aligned_cols=26 Identities=12% Similarity=-0.248 Sum_probs=19.2
Q ss_pred ccccccCCcEEEEeecChhhHHHHHH
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVE 27 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~ 27 (147)
+..++..|++|.+.+++.+.++...+
T Consensus 23 A~~~a~aG~~V~l~D~~~~~~~~~~~ 48 (321)
T PRK07066 23 VARALAHGLDVVAWDPAPGAEAALRA 48 (321)
T ss_pred HHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence 34577889999999998776555433
No 487
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=34.72 E-value=24 Score=24.17 Aligned_cols=59 Identities=12% Similarity=0.040 Sum_probs=35.2
Q ss_pred CccccccCCcEEEEeecCh-hhHHHHHHHHHhc--CC--------CceEEEEecCCCHHHHHHHHHHHHhhcC
Q 040927 1 MKRSNQVHYSMGEATTKDE-KRGLAAVEKLKNS--GC--------DNVIFHLLDVTDPASVDSLVHFVSSQFG 62 (147)
Q Consensus 1 ~~~~l~~~G~~v~l~~r~~-~~~~~~~~~l~~~--~~--------~~~~~~~~D~~~~~~~~~~~~~~~~~~g 62 (147)
|++.|+..|+.|++.+|+. +..+.+.+.+... +. ..+.++..-. +.+....+++...++
T Consensus 16 lA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~---~a~~~v~~~l~~~~~ 85 (211)
T COG2085 16 LALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPF---EAIPDVLAELRDALG 85 (211)
T ss_pred HHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccH---HHHHhHHHHHHHHhC
Confidence 4678899999999986654 4455555555322 10 1244444333 456666777777664
No 488
>PF05401 NodS: Nodulation protein S (NodS); InterPro: IPR008715 This entry consists of nodulation S (NodS) proteins. The products of the rhizobial nodulation genes are involved in the biosynthesis of lipochitin oligosaccharides (LCOs), which are host-specific signal molecules required for nodule formation. NodS is an S-adenosyl-L-methionine (SAM)-dependent methyltransferase involved in N methylation of LCOs. NodS uses N-deacetylated chitooligosaccharides, the products of the NodBC proteins, as its methyl acceptors [].; GO: 0008757 S-adenosylmethionine-dependent methyltransferase activity, 0009312 oligosaccharide biosynthetic process, 0009877 nodulation; PDB: 3OFK_D 3OFJ_A.
Probab=34.61 E-value=42 Score=22.79 Aligned_cols=43 Identities=16% Similarity=-0.015 Sum_probs=30.4
Q ss_pred cccccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCH
Q 040927 3 RSNQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDP 47 (147)
Q Consensus 3 ~~l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~ 47 (147)
..|+.+.-++..++-+...++.+.+.+...+ ++.+...|+.+.
T Consensus 59 ~~LA~rCd~LlavDis~~Al~~Ar~Rl~~~~--~V~~~~~dvp~~ 101 (201)
T PF05401_consen 59 ERLAPRCDRLLAVDISPRALARARERLAGLP--HVEWIQADVPEF 101 (201)
T ss_dssp HHHGGGEEEEEEEES-HHHHHHHHHHTTT-S--SEEEEES-TTT-
T ss_pred HHHHHhhCceEEEeCCHHHHHHHHHhcCCCC--CeEEEECcCCCC
Confidence 4567777779999999888888888887553 588888888653
No 489
>PF05221 AdoHcyase: S-adenosyl-L-homocysteine hydrolase; InterPro: IPR000043 Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase, 3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. This enzyme is ubiquitous, highly conserved, and may play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. AdoHcyase requires NAD+ as a cofactor and contains a central glycine-rich region which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity, 0006730 one-carbon metabolic process; PDB: 3N58_B 3H9U_C 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 1K0U_F 1B3R_A 1XWF_D ....
Probab=34.43 E-value=87 Score=22.36 Aligned_cols=53 Identities=6% Similarity=-0.133 Sum_probs=28.2
Q ss_pred cccccCCcEEEEeecCh-hhHHHHHHHHHhcCCCceEEEEecCCCHHHHHHHHHHHH
Q 040927 3 RSNQVHYSMGEATTKDE-KRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDSLVHFVS 58 (147)
Q Consensus 3 ~~l~~~G~~v~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 58 (147)
+-|...|+.|.+++.|. +....+.+.|...| +.++..--.+.++-...+.++.
T Consensus 61 ~tL~a~GAeV~~~~sNplSTQDdvaAAL~~~G---i~V~A~~get~eey~~~i~~~L 114 (268)
T PF05221_consen 61 ETLKALGAEVRWTGSNPLSTQDDVAAALAEEG---IPVFAWKGETDEEYWWCIEKAL 114 (268)
T ss_dssp HHHHHTTEEEEEEESSTTT--HHHHHHHHHTT---EEEEE-TT--HHHHHHHHHHCH
T ss_pred HHHHHcCCeEEEecCCCcccchHHHHHhccCC---ceEEEeCCCCHHHHHHHHHHHh
Confidence 45677899999988875 33445566665443 4555443333444444444443
No 490
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=34.07 E-value=43 Score=24.31 Aligned_cols=74 Identities=18% Similarity=0.099 Sum_probs=47.9
Q ss_pred ceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHHHHHhHHHhhhhHHHHHHHHHHhhccCCC
Q 040927 36 NVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAEKCIQTNYYGNKRMCEALIPLLQLSDS 112 (147)
Q Consensus 36 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~ 112 (147)
+..++..|+.+...+..++.. .++|.+ |........ .-+--.....|+.+...|+....... +-
T Consensus 58 ~ykfv~~di~~~~~~~~~~~~-----~~id~vihfaa~t~vd~s-----~~~~~~~~~nnil~t~~Lle~~~~sg---~i 124 (331)
T KOG0747|consen 58 NYKFVEGDIADADLVLYLFET-----EEIDTVIHFAAQTHVDRS-----FGDSFEFTKNNILSTHVLLEAVRVSG---NI 124 (331)
T ss_pred CceEeeccccchHHHHhhhcc-----CchhhhhhhHhhhhhhhh-----cCchHHHhcCCchhhhhHHHHHHhcc---Ce
Confidence 588999999998877666543 477777 443211111 11113446789999988888877654 22
Q ss_pred CeEEEEcCCC
Q 040927 113 PRIVNASSSM 122 (147)
Q Consensus 113 ~~iv~isS~~ 122 (147)
.++|++|+..
T Consensus 125 ~~fvhvSTde 134 (331)
T KOG0747|consen 125 RRFVHVSTDE 134 (331)
T ss_pred eEEEEecccc
Confidence 4689999844
No 491
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=34.05 E-value=27 Score=24.82 Aligned_cols=24 Identities=4% Similarity=-0.409 Sum_probs=16.4
Q ss_pred ccccccCCcEEEEeecChhhHHHH
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAA 25 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~ 25 (147)
++.|.+.|++|.+.+|+.+..+.+
T Consensus 12 A~~L~~~G~~V~v~dr~~~~~~~l 35 (288)
T TIGR01692 12 AANLLKAGHPVRVFDLFPDAVEEA 35 (288)
T ss_pred HHHHHhCCCeEEEEeCCHHHHHHH
Confidence 456677788888888876654443
No 492
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=33.64 E-value=1.5e+02 Score=20.54 Aligned_cols=38 Identities=24% Similarity=0.108 Sum_probs=22.5
Q ss_pred CcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCC
Q 040927 9 YSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTD 46 (147)
Q Consensus 9 G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~ 46 (147)
..+|+.++-+.+.++...+.+...+..++.++.+|..+
T Consensus 72 ~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~~ 109 (233)
T PF01209_consen 72 NGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAED 109 (233)
T ss_dssp --EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTTB
T ss_pred ccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHHH
Confidence 35788888888888877777765543356666666543
No 493
>TIGR02364 dha_pts dihydroxyacetone kinase, phosphotransfer subunit. In E. coli and many other bacteria, unlike the yeasts and a few bacteria such as Citrobacter freundii, the dihydroxyacetone kinase (also called glycerone kinase) transfers a phosphate from a phosphoprotein rather than from ATP and contains multiple subunits. This protein, which resembles proteins of PTS transport systems, is found with its gene adjacent to
Probab=33.59 E-value=1e+02 Score=19.12 Aligned_cols=42 Identities=17% Similarity=0.056 Sum_probs=20.0
Q ss_pred EEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCHHHHHH
Q 040927 11 MGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDPASVDS 52 (147)
Q Consensus 11 ~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~ 52 (147)
.+++++++..-.+.+.+.++.-.+.......+...+..++..
T Consensus 2 gIvivSHs~~lA~Gi~~~~~~~~g~~~~i~~~gg~~d~~~gt 43 (125)
T TIGR02364 2 GIVLVSHSKKIAEGIKELIKQMAGDDVTIISAGGTDDGRLGT 43 (125)
T ss_pred cEEEEeCCHHHHHHHHHHHHHHcCCCccEEEEecCCCCCccc
Confidence 367777775444444444443322234444454444333333
No 494
>PF06962 rRNA_methylase: Putative rRNA methylase; InterPro: IPR010719 This family contains a number of putative rRNA methylases.; PDB: 3EEY_H 3LBY_A 3MTI_A.
Probab=33.40 E-value=79 Score=20.15 Aligned_cols=106 Identities=20% Similarity=0.079 Sum_probs=52.5
Q ss_pred EEEEeecChhhHHHHHHHHHhcCCC-ceEEEEecCCCHHHHHHHHHHHHhhcCCccEE---ecCCCcchhhhcccHHHHH
Q 040927 11 MGEATTKDEKRGLAAVEKLKNSGCD-NVIFHLLDVTDPASVDSLVHFVSSQFGKLDIL---GGLPDNWYKMLTQTYELAE 86 (147)
Q Consensus 11 ~v~l~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---ag~~~~~~~~~~~~~~~~~ 86 (147)
+|+..+-..+.++.+.+.+++.+.. ++.++...-. .+.+.+.. +++|.+ -|..+...
T Consensus 1 kVyaFDIQ~~Ai~~T~~rL~~~~~~~~v~li~~sHe---~l~~~i~~-----~~v~~~iFNLGYLPggD----------- 61 (140)
T PF06962_consen 1 KVYAFDIQEEAIENTRERLEEAGLEDRVTLILDSHE---NLDEYIPE-----GPVDAAIFNLGYLPGGD----------- 61 (140)
T ss_dssp EEEEEES-HHHHHHHHHHHHHTT-GSGEEEEES-GG---GGGGT--S-------EEEEEEEESB-CTS------------
T ss_pred CEEEEECHHHHHHHHHHHHHhcCCCCcEEEEECCHH---HHHhhCcc-----CCcCEEEEECCcCCCCC-----------
Confidence 4777888888899999999887542 4666654433 33333333 578877 45442211
Q ss_pred HhHHHhhhhHHHHHHHHHHhhccCCCCeEEEEcCCCCCCcCCCchhhhcccc
Q 040927 87 KCIQTNYYGNKRMCEALIPLLQLSDSPRIVNASSSMGKLKNITNEWAKGVLS 138 (147)
Q Consensus 87 ~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~isS~~~~~~~~~~~~~~~~~~ 138 (147)
+.+-+.-.++..-++.++..+... |.|+.+.. .|+.+..-...++..|.
T Consensus 62 k~i~T~~~TTl~Al~~al~lL~~g--G~i~iv~Y-~GH~gG~eE~~av~~~~ 110 (140)
T PF06962_consen 62 KSITTKPETTLKALEAALELLKPG--GIITIVVY-PGHPGGKEESEAVEEFL 110 (140)
T ss_dssp TTSB--HHHHHHHHHHHHHHEEEE--EEEEEEE---STCHHHHHHHHHHHHH
T ss_pred CCCCcCcHHHHHHHHHHHHhhccC--CEEEEEEe-CCCCCCHHHHHHHHHHH
Confidence 112233334556667778777654 55554443 44443322333444433
No 495
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=33.16 E-value=34 Score=24.47 Aligned_cols=26 Identities=8% Similarity=-0.418 Sum_probs=20.3
Q ss_pred ccccccCCcEEEEeecChhhHHHHHH
Q 040927 2 KRSNQVHYSMGEATTKDEKRGLAAVE 27 (147)
Q Consensus 2 ~~~l~~~G~~v~l~~r~~~~~~~~~~ 27 (147)
+..|++.|++|++.+++.+.+++..+
T Consensus 20 A~~l~~~g~~V~~~d~~~~~~~~~~~ 45 (311)
T PRK06130 20 AALFARKGLQVVLIDVMEGALERARG 45 (311)
T ss_pred HHHHHhCCCeEEEEECCHHHHHHHHH
Confidence 45677889999999998877766554
No 496
>PF02601 Exonuc_VII_L: Exonuclease VII, large subunit; InterPro: IPR020579 Exonuclease VII 3.1.11.6 from EC is composed of two nonidentical subunits; one large subunit and 4 small ones []. Exonuclease VII catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. The large subunit also contains the OB-fold domains (IPR004365 from INTERPRO) that bind to nucleic acids at the N terminus. This entry represents Exonuclease VII, large subunit, C-terminal. ; GO: 0008855 exodeoxyribonuclease VII activity
Probab=33.13 E-value=1.9e+02 Score=20.91 Aligned_cols=55 Identities=16% Similarity=0.098 Sum_probs=34.6
Q ss_pred EEeecChhhHHHHHHHHHhcCC-CceEEEEecCCC---HHHHHHHHHHHHhhc--CCccEE
Q 040927 13 EATTKDEKRGLAAVEKLKNSGC-DNVIFHLLDVTD---PASVDSLVHFVSSQF--GKLDIL 67 (147)
Q Consensus 13 ~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~~D~~~---~~~~~~~~~~~~~~~--g~id~l 67 (147)
++++.+.....++...+...++ .++.++++-+.- +.++-+.++.+.+.. ..+|++
T Consensus 19 vITs~~gAa~~D~~~~~~~r~~~~~~~~~p~~vQG~~A~~~I~~al~~~~~~~~~~~~Dvi 79 (319)
T PF02601_consen 19 VITSPTGAAIQDFLRTLKRRNPIVEIILYPASVQGEGAAASIVSALRKANEMGQADDFDVI 79 (319)
T ss_pred EEeCCchHHHHHHHHHHHHhCCCcEEEEEeccccccchHHHHHHHHHHHHhccccccccEE
Confidence 5556677778888888877654 246677776643 445555555554331 258988
No 497
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=33.08 E-value=1.3e+02 Score=19.96 Aligned_cols=38 Identities=13% Similarity=-0.164 Sum_probs=21.8
Q ss_pred CCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCC
Q 040927 8 HYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVT 45 (147)
Q Consensus 8 ~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~ 45 (147)
.+++|+.++.+.+..+.+.+.++..+..++.++.+|+.
T Consensus 68 ~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~d~~ 105 (187)
T PRK00107 68 PELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHGRAE 105 (187)
T ss_pred CCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEeccHh
Confidence 45667777777666555555554444333566666654
No 498
>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals. The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....
Probab=32.76 E-value=79 Score=17.32 Aligned_cols=40 Identities=23% Similarity=0.071 Sum_probs=23.3
Q ss_pred cccC-CcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCH
Q 040927 5 NQVH-YSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDP 47 (147)
Q Consensus 5 l~~~-G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~ 47 (147)
|++. +.+|+.++.+.+.++...+..... ...+...|+.+.
T Consensus 14 l~~~~~~~v~~~D~~~~~~~~~~~~~~~~---~~~~~~~d~~~l 54 (95)
T PF08241_consen 14 LAKRGGASVTGIDISEEMLEQARKRLKNE---GVSFRQGDAEDL 54 (95)
T ss_dssp HHHTTTCEEEEEES-HHHHHHHHHHTTTS---TEEEEESBTTSS
T ss_pred HHhccCCEEEEEeCCHHHHHHHHhccccc---CchheeehHHhC
Confidence 4445 777888888877666555544322 244666676554
No 499
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=32.73 E-value=32 Score=24.47 Aligned_cols=26 Identities=4% Similarity=-0.236 Sum_probs=16.3
Q ss_pred ccccCCc-EEEEeecChhhHHHHHHHH
Q 040927 4 SNQVHYS-MGEATTKDEKRGLAAVEKL 29 (147)
Q Consensus 4 ~l~~~G~-~v~l~~r~~~~~~~~~~~l 29 (147)
.|.+.|+ +|.++.|+.++.+++.+++
T Consensus 143 aL~~~G~~~i~I~nRt~~ka~~La~~~ 169 (282)
T TIGR01809 143 ALASLGVTDITVINRNPDKLSRLVDLG 169 (282)
T ss_pred HHHHcCCCeEEEEeCCHHHHHHHHHHh
Confidence 3455665 4777777776666666555
No 500
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=32.51 E-value=1.4e+02 Score=20.51 Aligned_cols=61 Identities=13% Similarity=0.095 Sum_probs=31.0
Q ss_pred cccCCcEEEEeecChhhHHHHHHHHHhcCCCceEEEEecCCCH---HHHHHHHHHHHhhcCC--ccEE
Q 040927 5 NQVHYSMGEATTKDEKRGLAAVEKLKNSGCDNVIFHLLDVTDP---ASVDSLVHFVSSQFGK--LDIL 67 (147)
Q Consensus 5 l~~~G~~v~l~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~~~g~--id~l 67 (147)
+...|++|+.+..+.+...+...++.+... +..++. ...++ +....+..++.++.+. +|.+
T Consensus 92 ~~~~Ga~v~~~~~~~~~~~~~a~~~~~~~~-~~~~~~-~~~n~~~~~g~~~~~~Ei~~q~~~~~~d~i 157 (244)
T cd00640 92 MRALGAEVVLVPGDFDDAIALAKELAEEDP-GAYYVN-QFDNPANIAGQGTIGLEILEQLGGQKPDAV 157 (244)
T ss_pred HHHCCCEEEEECCCHHHHHHHHHHHHHhCC-CCEecC-CCCCHHHHHHHHHHHHHHHHHcCCCCCCEE
Confidence 445688888887764444455555544421 122221 12333 3333344566666654 7776
Done!