Query 040932
Match_columns 97
No_of_seqs 108 out of 626
Neff 4.8
Searched_HMMs 13730
Date Mon Mar 25 21:33:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040932.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/040932hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1b0aa2 c.58.1.2 (A:2-122) Tet 68.7 10 0.00076 23.4 6.8 54 31-97 31-86 (121)
2 d2bkfa1 d.15.2.2 (A:1-85) Next 63.9 8.7 0.00063 23.2 5.4 52 37-91 8-67 (85)
3 d1z3xa2 a.261.1.1 (A:88-235) G 62.9 0.15 1.1E-05 34.4 -3.5 30 29-61 118-147 (148)
4 d1nn7a_ d.42.1.2 (A:) Potassiu 62.7 0.67 4.9E-05 28.7 -0.2 56 36-96 2-58 (105)
5 d1unda_ a.14.1.1 (A:) Advillin 58.4 1.4 9.9E-05 23.1 0.6 18 54-71 1-18 (36)
6 d1y6ia2 a.261.1.1 (A:83-233) M 56.6 0.42 3E-05 32.2 -2.2 31 29-62 118-148 (151)
7 d2pd1a1 d.58.4.11 (A:1-100) Hy 55.4 12 0.0009 21.6 4.9 59 5-69 13-80 (100)
8 d1a4ia2 c.58.1.2 (A:2-126) Tet 50.7 18 0.0013 22.3 5.4 54 31-97 33-88 (125)
9 d3kvta_ d.42.1.2 (A:) akv3.1 v 46.9 1.7 0.00012 26.6 -0.3 56 35-96 3-61 (103)
10 d1tjya_ c.93.1.1 (A:) AI-2 rec 39.2 16 0.0012 23.4 3.9 31 44-74 2-35 (316)
11 d1yu5x1 a.14.1.1 (X:10-76) Vil 37.5 4.4 0.00032 23.6 0.6 20 52-71 30-49 (67)
12 d1ip9a_ d.15.2.2 (A:) Bud emer 37.2 31 0.0023 19.8 4.6 48 36-88 15-70 (85)
13 d1t1da_ d.42.1.2 (A:) Shaker p 34.3 4 0.00029 24.8 -0.0 55 36-96 3-60 (100)
14 d2al3a1 d.15.1.2 (A:10-85) Tet 34.2 26 0.0019 20.5 3.8 38 36-77 3-40 (76)
15 d1qusa_ d.2.1.6 (A:) 36 kDa so 30.9 15 0.0011 26.8 2.7 25 52-76 13-37 (322)
16 d1qzpa_ a.14.1.1 (A:) Dematin 30.6 4.7 0.00035 23.6 -0.1 20 52-71 31-50 (68)
17 d1ujsa_ a.14.1.1 (A:) Actin-bi 30.6 6.8 0.0005 24.0 0.7 21 52-72 45-65 (88)
18 d1y74b1 a.194.1.1 (B:83-132) P 30.0 10 0.00074 20.9 1.3 20 53-72 26-49 (50)
19 d1x7va_ d.58.4.11 (A:) Hypothe 28.1 32 0.0023 19.4 3.5 57 6-68 16-83 (98)
20 d1yu8x1 a.14.1.1 (X:42-76) Vil 27.3 8.2 0.0006 19.7 0.5 17 55-71 1-17 (35)
21 d1dkgd1 c.55.1.1 (D:3-185) Hea 25.3 18 0.0013 22.8 2.2 40 51-90 109-148 (183)
22 d1owxa_ d.58.7.1 (A:) Lupus LA 25.2 19 0.0014 21.2 2.1 15 28-42 4-18 (113)
23 d2r85a1 c.30.1.8 (A:1-99) 5-fo 24.5 0.61 4.4E-05 29.6 -5.4 24 29-52 65-88 (99)
24 d3buxb3 d.93.1.1 (B:264-351) C 22.5 27 0.002 21.1 2.4 36 33-71 37-73 (88)
25 d1mlaa1 c.19.1.1 (A:3-127,A:19 22.5 15 0.0011 24.6 1.3 20 55-74 22-41 (235)
26 d1t2da2 d.162.1.1 (A:151-315) 22.4 57 0.0042 20.0 4.2 32 36-70 126-157 (165)
27 d1whza_ d.50.3.2 (A:) Hypothet 22.1 63 0.0046 17.8 4.2 51 13-67 8-60 (70)
28 d1vi7a2 d.58.11.2 (A:138-208) 21.4 34 0.0024 18.4 2.6 46 45-93 2-55 (71)
29 d1vqon1 c.55.4.1 (N:1-186) Rib 20.6 20 0.0014 24.3 1.6 29 53-89 108-136 (186)
No 1
>d1b0aa2 c.58.1.2 (A:2-122) Tetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}
Probab=68.71 E-value=10 Score=23.40 Aligned_cols=54 Identities=24% Similarity=0.420 Sum_probs=39.3
Q ss_pred CCCCeEEEEeecCcceEEEEeccccCchHHHHHHHHHHHhcCCccCCCceeee--ccHHHHHHHHhhcC
Q 040932 31 VPRGHIAVYVGEMERKRFVVPISYLNHPLFADLLNRAEEEFGFNHPMGGLTIP--CKEDAFIDLTSRLH 97 (97)
Q Consensus 31 vpkG~~~VyVG~~~~~RfvVp~~~L~hP~F~~LL~~aeEEfG~~~~~G~L~IP--C~~~~F~~vl~~l~ 97 (97)
.+.+...|+||+ +. ..-.....-.+++++.|+... .+.+| |+...+...+..||
T Consensus 31 ~~P~LavI~vg~-d~----------aS~~Yv~~k~k~a~~lGi~~~--~~~l~~~~t~~~l~~~I~~lN 86 (121)
T d1b0aa2 31 RAPGLAVVLVGS-NP----------ASQIYVASKRKACEEVGFVSR--SYDLPETTSEAELLELIDTLN 86 (121)
T ss_dssp CCCEEEEEEESC-CH----------HHHHHHHHHHHHHHHHTCEEC--CEEECTTCCHHHHHHHHHHHH
T ss_pred CCceEEEEEeCC-Ch----------hHHHHHHHHHHHHHhhcccee--eeeccccccHHHHHHHHHHHh
Confidence 345888999998 21 012356777888999999875 57775 78888998887764
No 2
>d2bkfa1 d.15.2.2 (A:1-85) Next to BRCA1 gene 1 protein, NBR1 (KIAA0049) {Human (Homo sapiens) [TaxId: 9606]}
Probab=63.94 E-value=8.7 Score=23.17 Aligned_cols=52 Identities=15% Similarity=0.196 Sum_probs=36.9
Q ss_pred EEEeecCcceEEEEeccccCchHHHHHHHHHHHhcCC--------ccCCCceeeeccHHHHHH
Q 040932 37 AVYVGEMERKRFVVPISYLNHPLFADLLNRAEEEFGF--------NHPMGGLTIPCKEDAFID 91 (97)
Q Consensus 37 ~VyVG~~~~~RfvVp~~~L~hP~F~~LL~~aeEEfG~--------~~~~G~L~IPC~~~~F~~ 91 (97)
-|..|+ +..||.++.. +++.|.+|..+-+.-||. +.++--++|.|+++.=|.
T Consensus 8 Kvtf~~-dt~RF~ls~~--~~~~~~~L~~~i~~rf~l~~~~lkY~Ddd~e~v~l~~d~dl~E~ 67 (85)
T d2bkfa1 8 NVTFKN-EIQSFLVSDP--ENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINSQGEYEEA 67 (85)
T ss_dssp EEEETT-EEEEEEESCG--GGCCHHHHHHHHHHHHTCSSEEEEEECTTSCEEEECSHHHHHHH
T ss_pred EEEECC-ceEEEEecCC--CCCcHHHHHHHHHHhcCcccceEEEEcCCCCEEEEecHHHHHHH
Confidence 344454 7899988533 477899999999998885 334456889999775443
No 3
>d1z3xa2 a.261.1.1 (A:88-235) GUN4-like protein Ycf53 {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=62.92 E-value=0.15 Score=34.37 Aligned_cols=30 Identities=30% Similarity=0.521 Sum_probs=20.7
Q ss_pred cCCCCCeEEEEeecCcceEEEEeccccCchHHH
Q 040932 29 QVVPRGHIAVYVGEMERKRFVVPISYLNHPLFA 61 (97)
Q Consensus 29 ~~vpkG~~~VyVG~~~~~RfvVp~~~L~hP~F~ 61 (97)
..+|+||+|+.- . .+-..|--..|+||.|.
T Consensus 118 l~AP~GHLP~~~-~--lrg~~~~~~~l~h~a~~ 147 (148)
T d1z3xa2 118 LSAPRGHLPLTN-Q--LRGVQVLNALLNHPAWT 147 (148)
T ss_dssp TTSCTTCCSCCC-C--TTCSHHHHHHHTCGGGG
T ss_pred CCCCCCCCCcCC-c--cchHHHHHHHhcCcccc
Confidence 478999999743 2 34444566788888763
No 4
>d1nn7a_ d.42.1.2 (A:) Potassium channel kv4.2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=62.72 E-value=0.67 Score=28.68 Aligned_cols=56 Identities=21% Similarity=0.221 Sum_probs=38.3
Q ss_pred EEEEeecCcceEEEEecccc-CchHHHHHHHHHHHhcCCccCCCceeeeccHHHHHHHHhhc
Q 040932 36 IAVYVGEMERKRFVVPISYL-NHPLFADLLNRAEEEFGFNHPMGGLTIPCKEDAFIDLTSRL 96 (97)
Q Consensus 36 ~~VyVG~~~~~RfvVp~~~L-~hP~F~~LL~~aeEEfG~~~~~G~L~IPC~~~~F~~vl~~l 96 (97)
+.+-||. ++|.+..+-| ++|.. +|........++.+.|.+-|-.|...|++||..+
T Consensus 2 I~LNVGG---~~f~t~~~TL~~~p~s--~l~~~~~~~~~~~~~~~~FiDRdp~~F~~IL~yl 58 (105)
T d1nn7a_ 2 IVLNVSG---TRFQTWQDTLERYPDT--LLGSSERDFFYHPETQQYFFDRDPDIFRHILNFY 58 (105)
T ss_dssp EEEEETT---EEEEECHHHHHTSCSS--STTSGGGGGGEEGGGTEEEECSCTTTHHHHHHHH
T ss_pred EEEEECC---EEEEEeHHHHhcCCCC--CccccccccCcCCCCCcEEEeCCHHHHHHHHHHH
Confidence 5677886 8999998877 45531 1222233333444458899999999999999765
No 5
>d1unda_ a.14.1.1 (A:) Advillin {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.43 E-value=1.4 Score=23.09 Aligned_cols=18 Identities=22% Similarity=0.504 Sum_probs=16.7
Q ss_pred ccCchHHHHHHHHHHHhc
Q 040932 54 YLNHPLFADLLNRAEEEF 71 (97)
Q Consensus 54 ~L~hP~F~~LL~~aeEEf 71 (97)
||+.-.|++++.++.+||
T Consensus 1 yLsd~dF~~vFgmsr~eF 18 (36)
T d1unda_ 1 YLSEQDFVSVFGITRGQF 18 (36)
T ss_dssp CCCHHHHHHHHSSCHHHH
T ss_pred CCCHHHHHHHHCcCHHHH
Confidence 789999999999999987
No 6
>d1y6ia2 a.261.1.1 (A:83-233) Mg-chelatase cofactor Gun4 {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=56.57 E-value=0.42 Score=32.24 Aligned_cols=31 Identities=26% Similarity=0.485 Sum_probs=19.9
Q ss_pred cCCCCCeEEEEeecCcceEEEEeccccCchHHHH
Q 040932 29 QVVPRGHIAVYVGEMERKRFVVPISYLNHPLFAD 62 (97)
Q Consensus 29 ~~vpkG~~~VyVG~~~~~RfvVp~~~L~hP~F~~ 62 (97)
..+|+||+|+.-.- -.-| +--+.|+||.|.+
T Consensus 118 l~AP~GHLP~~~~l-rG~~--~~~~l~~h~~~~~ 148 (151)
T d1y6ia2 118 LSAPQGHLPLLNQL-RGVR--VAESLYRHPVWSQ 148 (151)
T ss_dssp TTSCTTCCSCCCCT-TCTH--HHHHHHTSTHHHH
T ss_pred CCCCCCCCCccchh-hhHH--HHHHHHcCcchhh
Confidence 36899999975421 0011 4445889998864
No 7
>d2pd1a1 d.58.4.11 (A:1-100) Hypothetical protein NE2512 {Nitrosomonas europaea [TaxId: 915]}
Probab=55.36 E-value=12 Score=21.59 Aligned_cols=59 Identities=20% Similarity=0.123 Sum_probs=41.5
Q ss_pred cccchHHHHHHHHhhhhcccCCCCcCCCCCeEEEEeecCcceEEEEec---------cccCchHHHHHHHHHHH
Q 040932 5 LPSMIHNAKQILKRHNNHALKSADQVVPRGHIAVYVGEMERKRFVVPI---------SYLNHPLFADLLNRAEE 69 (97)
Q Consensus 5 ~~~~~~~~k~~l~r~~s~~~~~~~~~vpkG~~~VyVG~~~~~RfvVp~---------~~L~hP~F~~LL~~aeE 69 (97)
+|+....+++.++.....+ .-..||+..++..++..+|++=- .+++.|.|+++++...+
T Consensus 13 kpg~~~~~~~~l~~~~~~~------~~E~Gcl~y~~~~~~p~~~~~~E~w~d~~a~~aH~~s~~~~~~~~~~~~ 80 (100)
T d2pd1a1 13 KPGQEAALADFLASALPLA------NAESGTTAWFALKFGPSTFGVFDAFADEAGRQAHLNGQIAAALMANAAT 80 (100)
T ss_dssp CTTCHHHHHHHHHHTHHHH------HTCTTEEEEEEEECSSSEEEEEEEESSHHHHHHHHTSHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHh------hcCCCeeEEEEecCCCcEEEEEEEeCChHHHHHHHcCHHHHHHHHHhHH
Confidence 4555556777776654433 33679998888765678888854 46778889999988765
No 8
>d1a4ia2 c.58.1.2 (A:2-126) Tetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.69 E-value=18 Score=22.35 Aligned_cols=54 Identities=19% Similarity=0.370 Sum_probs=37.6
Q ss_pred CCCCeEEEEeecCcceEEEEeccccCchHHHHHHHHHHHhcCCccCCCceeee--ccHHHHHHHHhhcC
Q 040932 31 VPRGHIAVYVGEMERKRFVVPISYLNHPLFADLLNRAEEEFGFNHPMGGLTIP--CKEDAFIDLTSRLH 97 (97)
Q Consensus 31 vpkG~~~VyVG~~~~~RfvVp~~~L~hP~F~~LL~~aeEEfG~~~~~G~L~IP--C~~~~F~~vl~~l~ 97 (97)
++.+...|+||+ +. ..-.....-.+++++.|.... .+.+| ++..++...+..||
T Consensus 33 ~~P~LavIlvg~-d~----------aS~~Yv~~k~k~a~~~Gi~~~--~~~l~~~~~e~el~~~I~~lN 88 (125)
T d1a4ia2 33 FTPRLAILQVGN-RD----------DSNLYINVKLKAAEEIGIKAT--HIKLPRTTTESEVMKYITSLN 88 (125)
T ss_dssp CCCEEEEEEESC-CH----------HHHHHHHHHHHHHHHHTCEEE--EEEECTTCCHHHHHHHHHHHH
T ss_pred CCceEEEEEcCC-Ch----------hHHHHHHHHHHHHHhccceEE--EEecCcchhHHHHHHHHHHHh
Confidence 344678899998 22 122456677888999998864 57777 56678888877664
No 9
>d3kvta_ d.42.1.2 (A:) akv3.1 voltage-gated potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]}
Probab=46.87 E-value=1.7 Score=26.58 Aligned_cols=56 Identities=14% Similarity=0.247 Sum_probs=39.6
Q ss_pred eEEEEeecCcceEEEEeccccCc-h--HHHHHHHHHHHhcCCccCCCceeeeccHHHHHHHHhhc
Q 040932 35 HIAVYVGEMERKRFVVPISYLNH-P--LFADLLNRAEEEFGFNHPMGGLTIPCKEDAFIDLTSRL 96 (97)
Q Consensus 35 ~~~VyVG~~~~~RfvVp~~~L~h-P--~F~~LL~~aeEEfG~~~~~G~L~IPC~~~~F~~vl~~l 96 (97)
.+.+=||. ++|.+..+-|.. | .|..+ ++....++.+.|.+-|--+...|++||..+
T Consensus 3 rI~LNVGG---~~F~t~~~tL~~~~~s~l~~~---~~~~~~~~~~~~~~fiDRdp~~F~~IL~yl 61 (103)
T d3kvta_ 3 RVIINVGG---IRHETYKATLKKIPATRLSRL---TEGMLNYDPVLNEYFFDRHPGVFAQIINYY 61 (103)
T ss_dssp EEEEEETT---EEEEEEHHHHTTSCSSTTTTC---CTTSTTEETTTTEEEECSCTTTHHHHHHHH
T ss_pred EEEEEECC---EEEEEeHHHHhhCccchhHHH---HcCCCccCCCCCcEEecCCHHHHHHHHHHH
Confidence 46677886 999999887763 4 23322 233334455558999999999999999865
No 10
>d1tjya_ c.93.1.1 (A:) AI-2 receptor LsrB {Salmonella typhi [TaxId: 90370]}
Probab=39.20 E-value=16 Score=23.35 Aligned_cols=31 Identities=16% Similarity=0.205 Sum_probs=24.1
Q ss_pred cceEEEEeccccCchHHHHHHHH---HHHhcCCc
Q 040932 44 ERKRFVVPISYLNHPLFADLLNR---AEEEFGFN 74 (97)
Q Consensus 44 ~~~RfvVp~~~L~hP~F~~LL~~---aeEEfG~~ 74 (97)
..+|..+=+..++||.|....+- +++|+|++
T Consensus 2 ~~~kI~~i~~~~~npf~~~~~~g~~~~a~~~G~~ 35 (316)
T d1tjya_ 2 SAERIAFIPKLVGVGFFTSGGNGAQEAGKALGID 35 (316)
T ss_dssp CCCEEEEECSSSSSHHHHHHHHHHHHHHHHHTCE
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCE
Confidence 35778888899999999988655 45678874
No 11
>d1yu5x1 a.14.1.1 (X:10-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=37.49 E-value=4.4 Score=23.63 Aligned_cols=20 Identities=15% Similarity=0.232 Sum_probs=18.4
Q ss_pred ccccCchHHHHHHHHHHHhc
Q 040932 52 ISYLNHPLFADLLNRAEEEF 71 (97)
Q Consensus 52 ~~~L~hP~F~~LL~~aeEEf 71 (97)
-.||+.-.|++++.++.+||
T Consensus 30 E~yLsd~dF~~vFgms~~eF 49 (67)
T d1yu5x1 30 ENHLSDEDFKAVFGMTRSAF 49 (67)
T ss_dssp GGGSCHHHHHHHHSSCHHHH
T ss_pred HhhCCHHHHHHHHCcCHHHH
Confidence 37999999999999999998
No 12
>d1ip9a_ d.15.2.2 (A:) Bud emergence mediator Bemp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=37.17 E-value=31 Score=19.81 Aligned_cols=48 Identities=10% Similarity=0.142 Sum_probs=34.0
Q ss_pred EEEEeecCcceEEEEeccccCchHHHHHHHHHHHhcCC--------ccCCCceeeeccHHH
Q 040932 36 IAVYVGEMERKRFVVPISYLNHPLFADLLNRAEEEFGF--------NHPMGGLTIPCKEDA 88 (97)
Q Consensus 36 ~~VyVG~~~~~RfvVp~~~L~hP~F~~LL~~aeEEfG~--------~~~~G~L~IPC~~~~ 88 (97)
+=|+.++ +..||.||.+ ..|.+|.++-++-|+. +.++..++|.|+.+.
T Consensus 15 VKv~~~~-D~~~~~l~~~----it~~dL~~kI~~rf~~~~~~lkY~Dedgd~v~i~sD~Dl 70 (85)
T d1ip9a_ 15 IKFYYKD-DIFALMLKGD----TTYKELRSKIAPRIDTDNFKLQTKLFDGSGEEIKTDSQV 70 (85)
T ss_dssp EEECBTT-CCEEEEECSC----CCHHHHHHHHHHHHTSSCEEEEECCSSSCCSCCCSHHHH
T ss_pred EEEEECC-cEEEEEeCCC----CCHHHHHHHHHHHhCCCceEEEEEcCCCCEEEEeCHHHH
Confidence 3444465 8999999854 4599999998888862 233356788998765
No 13
>d1t1da_ d.42.1.2 (A:) Shaker potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]}
Probab=34.28 E-value=4 Score=24.77 Aligned_cols=55 Identities=16% Similarity=0.210 Sum_probs=37.8
Q ss_pred EEEEeecCcceEEEEeccccCc-h--HHHHHHHHHHHhcCCccCCCceeeeccHHHHHHHHhhc
Q 040932 36 IAVYVGEMERKRFVVPISYLNH-P--LFADLLNRAEEEFGFNHPMGGLTIPCKEDAFIDLTSRL 96 (97)
Q Consensus 36 ~~VyVG~~~~~RfvVp~~~L~h-P--~F~~LL~~aeEEfG~~~~~G~L~IPC~~~~F~~vl~~l 96 (97)
+.+-||. ++|.+..+-|.. | .+..|.... -.++.+.|.+-|--+...|++||..+
T Consensus 3 I~LNVGG---~~f~t~~~tL~~~p~s~l~~l~~~~---~~~~~~~g~~FiDRdp~~F~~IL~fl 60 (100)
T d1t1da_ 3 VVINVSG---LRFETQLKTLNQFPDTLLGNPQKRN---RYYDPLRNEYFFDRNRPSFDAILYFY 60 (100)
T ss_dssp EEEEETT---EEEEEEHHHHHTSTTSTTTCHHHHG---GGEETTTTEEEECSCSTTHHHHHHHH
T ss_pred EEEEECC---EEEEEeHHHHhhCCCchhHHHHhCC---CcCCCCCCeEEEecCHHHHHHHHHHH
Confidence 4567886 899998877654 4 344433221 22344558999999999999999764
No 14
>d2al3a1 d.15.1.2 (A:10-85) Tether containing UBX domain for GLUT4 (Tug) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=34.16 E-value=26 Score=20.54 Aligned_cols=38 Identities=16% Similarity=0.296 Sum_probs=27.8
Q ss_pred EEEEeecCcceEEEEeccccCchHHHHHHHHHHHhcCCccCC
Q 040932 36 IAVYVGEMERKRFVVPISYLNHPLFADLLNRAEEEFGFNHPM 77 (97)
Q Consensus 36 ~~VyVG~~~~~RfvVp~~~L~hP~F~~LL~~aeEEfG~~~~~ 77 (97)
+.|..- ..+|..|+++ -.-.+.+.|++|.+.|||+.+.
T Consensus 3 V~Vl~~--~~rR~~VKvt--P~t~l~~VL~eaC~k~~~~~~~ 40 (76)
T d2al3a1 3 VSVLAP--NGRRHTVKVT--PSTVLLQVLEDTCRRQDFNPSE 40 (76)
T ss_dssp EEEECT--TSCEEEECCC--TTSBHHHHHHHHHHHTTCCGGG
T ss_pred EEEECC--CCcEEEEEeC--CCcCHHHHHHHHHHHhCCChhH
Confidence 444443 4788888874 3446889999999999998653
No 15
>d1qusa_ d.2.1.6 (A:) 36 kDa soluble lytic transglycosylase, SLT35 {Escherichia coli [TaxId: 562]}
Probab=30.89 E-value=15 Score=26.77 Aligned_cols=25 Identities=16% Similarity=0.444 Sum_probs=22.2
Q ss_pred ccccCchHHHHHHHHHHHhcCCccC
Q 040932 52 ISYLNHPLFADLLNRAEEEFGFNHP 76 (97)
Q Consensus 52 ~~~L~hP~F~~LL~~aeEEfG~~~~ 76 (97)
-+|.+||.+++++++..+++||+.+
T Consensus 13 ~dya~~p~v~~Fi~~la~~~G~s~~ 37 (322)
T d1qusa_ 13 GDFANNPNAQQFIDKMVNKHGFDRQ 37 (322)
T ss_dssp STTTTCHHHHHHHHHHHHHHCCCHH
T ss_pred CCcccCHHHHHHHHHHHHHhCCCHH
Confidence 4789999999999999999999853
No 16
>d1qzpa_ a.14.1.1 (A:) Dematin {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.64 E-value=4.7 Score=23.58 Aligned_cols=20 Identities=25% Similarity=0.316 Sum_probs=18.4
Q ss_pred ccccCchHHHHHHHHHHHhc
Q 040932 52 ISYLNHPLFADLLNRAEEEF 71 (97)
Q Consensus 52 ~~~L~hP~F~~LL~~aeEEf 71 (97)
-.||+.-.|++++.++.+||
T Consensus 31 E~yLsd~dF~~vFgms~~eF 50 (68)
T d1qzpa_ 31 ERHLSAEDFSRVFAMSPEEF 50 (68)
T ss_dssp GGGBCHHHHHHHSSSCHHHH
T ss_pred HhhCCHHHHHHHHCcCHHHH
Confidence 37999999999999999998
No 17
>d1ujsa_ a.14.1.1 (A:) Actin-binding LIM protein homologue KIAA0843 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.59 E-value=6.8 Score=23.97 Aligned_cols=21 Identities=19% Similarity=0.235 Sum_probs=19.0
Q ss_pred ccccCchHHHHHHHHHHHhcC
Q 040932 52 ISYLNHPLFADLLNRAEEEFG 72 (97)
Q Consensus 52 ~~~L~hP~F~~LL~~aeEEfG 72 (97)
-.||+.-.|++++.++.+||-
T Consensus 45 E~YLSdedF~~vFgMsr~eF~ 65 (88)
T d1ujsa_ 45 ERHLSQEEFYQVFGMTISEFD 65 (88)
T ss_dssp GGGSCTTHHHHHHSSCHHHHT
T ss_pred HhcCCHHHHHHHHCcCHHHHH
Confidence 469999999999999999984
No 18
>d1y74b1 a.194.1.1 (B:83-132) Peripheral plasma membrane protein cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.96 E-value=10 Score=20.91 Aligned_cols=20 Identities=35% Similarity=0.584 Sum_probs=14.7
Q ss_pred cccCchHHHHHHHH----HHHhcC
Q 040932 53 SYLNHPLFADLLNR----AEEEFG 72 (97)
Q Consensus 53 ~~L~hP~F~~LL~~----aeEEfG 72 (97)
..|+.|.|++||.- |.+-||
T Consensus 26 ~lL~~PH~~aLL~aHD~VA~k~Y~ 49 (50)
T d1y74b1 26 RILTQPHFMALLQTHDVVAHEVYS 49 (50)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhCHHHHHHHHHHHHHHHHhcc
Confidence 46889999999974 455555
No 19
>d1x7va_ d.58.4.11 (A:) Hypothetical protein PA3566 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=28.10 E-value=32 Score=19.35 Aligned_cols=57 Identities=12% Similarity=0.101 Sum_probs=37.5
Q ss_pred ccchHHHHHHHHhhhhcccCCCCcCCCCCeEEEEeec--CcceEEEEecc---------ccCchHHHHHHHHHH
Q 040932 6 PSMIHNAKQILKRHNNHALKSADQVVPRGHIAVYVGE--MERKRFVVPIS---------YLNHPLFADLLNRAE 68 (97)
Q Consensus 6 ~~~~~~~k~~l~r~~s~~~~~~~~~vpkG~~~VyVG~--~~~~RfvVp~~---------~L~hP~F~~LL~~ae 68 (97)
|+....+++.++.....+ .-..||+...+.. ++..+|++=-. ++++|.|+++.+..+
T Consensus 16 pg~~~~~~~~l~~~~~~t------~~epGcl~~~~~~~~~~~~~~~~~E~w~d~~a~~~H~~s~~~~~~~~~~~ 83 (98)
T d1x7va_ 16 PGHAEALERELRALVAPS------RAEAGCLQYDLHQDRHDSHLFYMIEQWRDDAALERHQNTEHFLRFSRGNE 83 (98)
T ss_dssp TTCHHHHHHHHHHHHHHH------HHSTTEEEEEEEECSSCTTEEEEEEEESSHHHHHHHHTSHHHHHHHTTCG
T ss_pred CCCHHHHHHHHHHHHHHH------HcCCCceEEEEEEcCCCCCEEEEEEEECCHHHHHHHhcCHHHHHHHHHHH
Confidence 555556777776665443 2257999998864 45788888754 456677777666543
No 20
>d1yu8x1 a.14.1.1 (X:42-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=27.31 E-value=8.2 Score=19.73 Aligned_cols=17 Identities=18% Similarity=0.350 Sum_probs=14.0
Q ss_pred cCchHHHHHHHHHHHhc
Q 040932 55 LNHPLFADLLNRAEEEF 71 (97)
Q Consensus 55 L~hP~F~~LL~~aeEEf 71 (97)
|+.-.|++++.++.+||
T Consensus 1 Lsd~dF~~vfgmsr~eF 17 (35)
T d1yu8x1 1 LSDEDFKAVFGMTRSAF 17 (35)
T ss_dssp SCHHHHHHHHSSCHHHH
T ss_pred CCHHHHHHHHCCCHHHH
Confidence 56678899999998887
No 21
>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]}
Probab=25.34 E-value=18 Score=22.76 Aligned_cols=40 Identities=13% Similarity=0.130 Sum_probs=30.0
Q ss_pred eccccCchHHHHHHHHHHHhcCCccCCCceeeeccHHHHH
Q 040932 51 PISYLNHPLFADLLNRAEEEFGFNHPMGGLTIPCKEDAFI 90 (97)
Q Consensus 51 p~~~L~hP~F~~LL~~aeEEfG~~~~~G~L~IPC~~~~F~ 90 (97)
..+-|-.-.++.|.+.|++.+|-+-..-+|++|+.....+
T Consensus 109 s~~~l~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~~ 148 (183)
T d1dkgd1 109 APPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQ 148 (183)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHH
Confidence 4455666778889999999999776656789998766544
No 22
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.24 E-value=19 Score=21.23 Aligned_cols=15 Identities=13% Similarity=0.240 Sum_probs=13.1
Q ss_pred CcCCCCCeEEEEeec
Q 040932 28 DQVVPRGHIAVYVGE 42 (97)
Q Consensus 28 ~~~vpkG~~~VyVG~ 42 (97)
+.+.|.|++-+|||.
T Consensus 4 ~~~~~~g~~~~fvgn 18 (113)
T d1owxa_ 4 SLEEKIGCLLKFSGD 18 (113)
T ss_dssp CCSCCCCCEEEEEES
T ss_pred CcCCCCCCeEEEECC
Confidence 468899999999996
No 23
>d2r85a1 c.30.1.8 (A:1-99) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Pyrococcus furiosus [TaxId: 2261]}
Probab=24.54 E-value=0.61 Score=29.63 Aligned_cols=24 Identities=29% Similarity=0.400 Sum_probs=16.6
Q ss_pred cCCCCCeEEEEeecCcceEEEEec
Q 040932 29 QVVPRGHIAVYVGEMERKRFVVPI 52 (97)
Q Consensus 29 ~~vpkG~~~VyVG~~~~~RfvVp~ 52 (97)
.-+|-|.|++|+|-+.-+.|.||+
T Consensus 65 I~IPhgSfv~Y~G~d~ie~~~VP~ 88 (99)
T d2r85a1 65 VVVPTGSFVAHLGIELVENMKVPY 88 (99)
T ss_dssp EECCCTTHHHHHCHHHHHTCCSCB
T ss_pred EEecCCCEEEEEcHHHHhcCCCCc
Confidence 478999999999962222366663
No 24
>d3buxb3 d.93.1.1 (B:264-351) Cbl {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.51 E-value=27 Score=21.06 Aligned_cols=36 Identities=31% Similarity=0.498 Sum_probs=25.6
Q ss_pred CCeEEE-EeecCcceEEEEeccccCchHHHHHHHHHHHhc
Q 040932 33 RGHIAV-YVGEMERKRFVVPISYLNHPLFADLLNRAEEEF 71 (97)
Q Consensus 33 kG~~~V-yVG~~~~~RfvVp~~~L~hP~F~~LL~~aeEEf 71 (97)
-|.-|+ ||.. + .=++-+-=.|.|++|+|++-++|-|
T Consensus 37 lGQWAIGyvt~-d--g~IlQTIp~nk~L~qaLidG~reGf 73 (88)
T d3buxb3 37 LGQWAIGYVTA-D--GNILQTIPHNKPLFQALIDGFREGF 73 (88)
T ss_dssp TTSEEEEEECT-T--SCEEEECCSSCCHHHHHHHHHHHTS
T ss_pred ccceeeeeecc-C--CceeeeccCccHHHHHHHhccccee
Confidence 344443 6765 2 2356666789999999999999976
No 25
>d1mlaa1 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of malonyl-CoA ACP transacylase FabD {Escherichia coli [TaxId: 562]}
Probab=22.46 E-value=15 Score=24.55 Aligned_cols=20 Identities=15% Similarity=0.501 Sum_probs=17.5
Q ss_pred cCchHHHHHHHHHHHhcCCc
Q 040932 55 LNHPLFADLLNRAEEEFGFN 74 (97)
Q Consensus 55 L~hP~F~~LL~~aeEEfG~~ 74 (97)
-++|.|++.++++.+-+|++
T Consensus 22 ~~~p~~r~~~~~~~~~l~~~ 41 (235)
T d1mlaa1 22 ASYPIVEETFAEASAALGYD 41 (235)
T ss_dssp HHCHHHHHHHHHHHHHHTSC
T ss_pred HCCHHHHHHHHHHHHHhCCC
Confidence 46899999999999998875
No 26
>d1t2da2 d.162.1.1 (A:151-315) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=22.40 E-value=57 Score=20.03 Aligned_cols=32 Identities=22% Similarity=0.231 Sum_probs=21.9
Q ss_pred EEEEeecCcceEEEEeccccCchHHHHHHHHHHHh
Q 040932 36 IAVYVGEMERKRFVVPISYLNHPLFADLLNRAEEE 70 (97)
Q Consensus 36 ~~VyVG~~~~~RfvVp~~~L~hP~F~~LL~~aeEE 70 (97)
+||-+|. +.-.-++++. |+ +.=+++|++|++|
T Consensus 126 ~Pv~lg~-~Gv~~i~~l~-L~-~~E~~~L~~s~~~ 157 (165)
T d1t2da2 126 TPVVLGA-NGVEQVIELQ-LN-SEEKAKFDEAIAE 157 (165)
T ss_dssp EEEEEET-TEEEEECCCC-CC-HHHHHHHHHHHHH
T ss_pred eeEEEcC-CceEEEeCCC-CC-HHHHHHHHHHHHH
Confidence 4566676 4455567776 65 6678888888776
No 27
>d1whza_ d.50.3.2 (A:) Hypothetical protein TTHA1913 {Thermus thermophilus [TaxId: 274]}
Probab=22.09 E-value=63 Score=17.80 Aligned_cols=51 Identities=18% Similarity=0.378 Sum_probs=31.3
Q ss_pred HHHHHhhhhcccCCCCcCCCCCeEEEEeecCcceEEEEecc--ccCchHHHHHHHHH
Q 040932 13 KQILKRHNNHALKSADQVVPRGHIAVYVGEMERKRFVVPIS--YLNHPLFADLLNRA 67 (97)
Q Consensus 13 k~~l~r~~s~~~~~~~~~vpkG~~~VyVG~~~~~RfvVp~~--~L~hP~F~~LL~~a 67 (97)
|++++.....+.. ... .+|-.-.|.-. +.++.+||.. =|.-..+++.|++|
T Consensus 8 kelik~L~~~Gf~--~~r-qkGSH~~~~~~-~~~~~~v~~~~kei~~gtl~~Ilkqa 60 (70)
T d1whza_ 8 EEVARKLRRLGFV--ERM-AKGGHRLYTHP-DGRIVVVPFHSGELPKGTFKRILRDA 60 (70)
T ss_dssp HHHHHHHHHTTCE--EEE-EETTEEEEECT-TSCEEEEECSSSSCCHHHHHHHHHHT
T ss_pred HHHHHHHHHCCcE--Eec-cCCceeEEEcC-CCCEEEcCCCCCccCHHHHHHHHHHh
Confidence 5555555544431 011 35777788754 5566677764 36677788888887
No 28
>d1vi7a2 d.58.11.2 (A:138-208) Hypothetical protein YigZ, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=21.43 E-value=34 Score=18.43 Aligned_cols=46 Identities=11% Similarity=0.122 Sum_probs=32.2
Q ss_pred ceEEEEeccccCchHHHHHHHHHH-----HhcCCccCCCceeeecc---HHHHHHHH
Q 040932 45 RKRFVVPISYLNHPLFADLLNRAE-----EEFGFNHPMGGLTIPCK---EDAFIDLT 93 (97)
Q Consensus 45 ~~RfvVp~~~L~hP~F~~LL~~ae-----EEfG~~~~~G~L~IPC~---~~~F~~vl 93 (97)
+.+|.+.++|=....++.+|++.. ++|+=+ -.++|.+. ++.|..-+
T Consensus 2 ~t~~~l~~dY~~~~~v~~~L~~~~~~i~~~~y~~~---V~l~v~vp~~~~~~f~~~l 55 (71)
T d1vi7a2 2 LTEYTLQCEYHQLTGIEALLGQCDGKIINSDYQAF---VLLRVALPAAKVAEFSAKL 55 (71)
T ss_dssp CEEEEEEECTTTHHHHHHHHHHTTCEEEEEEESSS---EEEEEEECSSTHHHHHHHH
T ss_pred ceEEEEEeccccHHHHHHHHHHCCCEEEeeeeccE---EEEEEEECHHHHHHHHHHH
Confidence 468999999999999999999873 456632 34555543 45555444
No 29
>d1vqon1 c.55.4.1 (N:1-186) Ribosomal protein L18 (L18p) {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=20.64 E-value=20 Score=24.26 Aligned_cols=29 Identities=24% Similarity=0.306 Sum_probs=24.2
Q ss_pred cccCchHHHHHHHHHHHhcCCccCCCceeeeccHHHH
Q 040932 53 SYLNHPLFADLLNRAEEEFGFNHPMGGLTIPCKEDAF 89 (97)
Q Consensus 53 ~~L~hP~F~~LL~~aeEEfG~~~~~G~L~IPC~~~~F 89 (97)
.|..|-...++++-|.| |+|.||+++..|
T Consensus 108 ~~~yhgRV~A~akgard--------~GL~Iph~~~~~ 136 (186)
T d1vqon1 108 SPTPGSKVFAIQEGAID--------AGLDIPHNDDVL 136 (186)
T ss_dssp CCCTTCHHHHHHHHHHH--------TTCBCCCCGGGS
T ss_pred CCCccchHHHHHHHHHh--------cCccCCCCCccC
Confidence 46778888999998876 789999998766
Done!