Query 040934
Match_columns 72
No_of_seqs 100 out of 707
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 21:34:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040934.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040934hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1hv2_A Elongin C, ELC1; protei 99.9 2.5E-28 8.5E-33 142.9 6.4 67 1-71 1-67 (99)
2 1vcb_B Protein (elongin C); tu 99.9 2.7E-28 9.4E-33 145.6 6.2 69 3-71 15-83 (112)
3 2fnj_C Transcription elongatio 99.9 3.1E-28 1E-32 141.8 5.9 67 5-71 1-67 (96)
4 4ajy_C Transcription elongatio 99.9 1.2E-26 4.2E-31 134.8 6.0 66 6-71 3-68 (97)
5 3v7d_A Suppressor of kinetocho 99.9 7.5E-26 2.6E-30 142.8 7.0 70 1-71 4-75 (169)
6 1fs1_B SKP1, cyclin A/CDK2-ass 99.9 3.9E-23 1.3E-27 126.9 4.9 60 6-71 3-62 (141)
7 2p1m_A SKP1-like protein 1A; F 99.9 7.8E-24 2.7E-28 132.3 -1.0 65 1-71 1-65 (160)
8 2ast_A S-phase kinase-associat 99.9 7.7E-22 2.6E-26 122.8 7.5 66 6-71 2-67 (159)
9 2vkp_A BTB/POZ domain-containi 98.4 1.8E-06 6.3E-11 49.1 6.8 59 6-67 10-72 (109)
10 2if5_A Zinc finger and BTB dom 98.2 8.9E-06 3.1E-10 47.0 7.0 59 6-67 27-86 (120)
11 3htm_A Speckle-type POZ protei 98.1 1.1E-05 3.7E-10 48.9 6.9 60 6-68 36-96 (172)
12 2ppi_A Gigaxonin; BTB domain, 98.1 1E-05 3.5E-10 48.6 6.4 61 6-67 49-110 (144)
13 1r29_A B-cell lymphoma 6 prote 98.0 4E-05 1.4E-09 44.7 7.6 58 6-67 31-90 (127)
14 4eoz_A Speckle-type POZ protei 98.0 9.9E-06 3.4E-10 47.8 4.7 60 6-68 27-87 (145)
15 3ohu_A Transcription regulator 98.0 5.4E-05 1.8E-09 44.0 7.5 57 6-67 34-92 (125)
16 1buo_A POZ domain, protein (pr 97.9 7.4E-05 2.5E-09 43.3 6.9 54 6-67 30-84 (121)
17 2vpk_A Myoneurin; transcriptio 97.9 0.00012 4E-09 42.0 7.6 55 6-67 24-81 (116)
18 3b84_A Zinc finger and BTB dom 97.8 5.8E-05 2E-09 43.7 6.2 55 6-67 26-81 (119)
19 3ga1_A Nucleus accumbens-assoc 97.8 6.9E-05 2.4E-09 43.9 6.6 55 6-67 35-91 (129)
20 2yy9_A Zinc finger and BTB dom 97.8 4.4E-05 1.5E-09 45.2 5.1 56 6-68 27-83 (135)
21 3fkc_A Transcriptional regulat 97.8 0.00012 4.2E-09 42.3 6.5 54 6-67 33-87 (116)
22 3hqi_A Speckle-type POZ protei 97.7 0.0001 3.6E-09 48.6 6.8 59 6-67 176-235 (312)
23 3hve_A Gigaxonin; ubiquitin, c 97.6 8.8E-05 3E-09 47.8 5.1 61 6-67 33-94 (256)
24 2z8h_A Transcription regulator 97.6 0.00036 1.2E-08 41.2 7.4 57 6-67 38-96 (138)
25 2ihc_A Transcription regulator 97.6 0.00032 1.1E-08 40.8 7.0 57 6-67 31-89 (124)
26 2q81_A MIZ-1 protein; BTB/POZ 97.6 0.00024 8.4E-09 41.0 6.2 54 6-67 29-83 (119)
27 3i3n_A Kelch-like protein 11; 97.6 6.7E-05 2.3E-09 49.0 3.8 60 6-67 34-102 (279)
28 3m5b_A Zinc finger and BTB dom 96.1 0.0028 9.7E-08 36.8 2.2 50 6-67 32-82 (119)
29 1xb4_A VPS25, hypothetical 23. 72.6 1.7 6E-05 27.7 1.7 13 59-71 32-44 (202)
30 3cuq_C Vacuolar protein-sortin 68.9 2.3 7.9E-05 26.5 1.7 13 59-71 35-47 (176)
31 2xuv_A HDEB, 10K-L protein; un 63.5 3 0.0001 22.8 1.3 25 46-70 39-63 (79)
32 3drz_A BTB/POZ domain-containi 61.9 14 0.00048 20.5 4.0 61 5-67 6-70 (107)
33 3phx_B Ubiquitin-like protein 61.8 7.8 0.00027 19.8 2.7 35 1-35 1-35 (79)
34 2pjh_A Protein NPL4, nuclear p 52.8 6.7 0.00023 20.9 1.5 19 1-20 1-19 (80)
35 2hj8_A Interferon-induced 17 k 48.3 17 0.00057 19.2 2.7 20 1-20 1-20 (88)
36 3r2c_J Protein NUSE, 30S ribos 45.2 18 0.00062 19.7 2.5 42 1-51 1-43 (83)
37 3kvt_A Potassium channel prote 42.9 9.3 0.00032 21.8 1.1 64 1-67 1-66 (115)
38 3gox_A Restriction endonucleas 42.2 18 0.0006 23.1 2.4 17 53-69 183-199 (200)
39 1dj8_A HDEA, protein HNS-depen 39.7 19 0.00066 19.9 2.1 24 46-70 48-71 (89)
40 1got_G GT-gamma; complex (GTP- 38.9 23 0.00079 18.9 2.3 17 55-71 41-57 (73)
41 2ra2_A Putative lipoprotein; X 37.2 26 0.00089 18.3 2.2 19 1-20 1-19 (64)
42 2dhy_A CUE domain-containing p 37.0 22 0.00074 18.6 1.9 19 50-68 29-47 (67)
43 1ng7_A Poliovirus 3A-N, genome 35.7 19 0.00064 18.7 1.5 21 48-68 16-41 (60)
44 1p3q_Q VPS9P, vacuolar protein 35.6 28 0.00096 17.5 2.1 19 50-68 23-41 (54)
45 2io0_B Small ubiquitin-related 35.3 33 0.0011 18.6 2.6 20 1-20 1-21 (91)
46 2waa_A Acetyl esterase, xylan 33.0 7.7 0.00026 25.6 -0.4 16 56-71 331-346 (347)
47 4h10_A ARYL hydrocarbon recept 31.8 38 0.0013 17.8 2.4 18 54-71 47-64 (73)
48 1wgl_A TOLL-interacting protei 30.9 27 0.00091 17.7 1.6 18 50-67 20-37 (59)
49 3d3c_J 30S ribosomal protein S 30.6 44 0.0015 18.2 2.6 37 6-51 12-48 (87)
50 3v7e_A Ribosome-associated pro 29.9 49 0.0017 17.4 2.7 19 51-69 35-53 (82)
51 3htu_A Vacuolar protein-sortin 29.7 70 0.0024 17.2 3.5 24 46-69 40-63 (79)
52 3qvn_A Manganese-containing su 29.5 24 0.00081 22.3 1.5 19 51-71 22-40 (206)
53 3kky_A Mnsod, superoxide dismu 29.3 22 0.00074 22.6 1.3 19 51-71 17-35 (211)
54 4h10_B Circadian locomoter out 28.0 35 0.0012 18.0 1.8 15 54-68 43-57 (71)
55 1pl4_A Superoxide dismutase [M 27.7 24 0.00082 22.1 1.3 19 51-71 16-34 (198)
56 3rn4_A Superoxide dismutase [M 27.7 24 0.00082 22.5 1.3 19 51-71 24-42 (215)
57 3p8c_F ABL interactor 2; actin 27.2 27 0.00093 21.4 1.4 16 54-69 23-38 (159)
58 1ids_A Iron superoxide dismuta 27.2 25 0.00085 22.2 1.3 19 51-71 18-36 (207)
59 3dc5_A Superoxide dismutase [M 26.7 26 0.00088 22.0 1.3 19 51-71 17-35 (195)
60 3d9j_A RNA-binding protein 16; 26.4 59 0.002 19.0 2.8 21 51-71 19-39 (145)
61 1ix9_A Mnsod, superoxide dismu 26.3 26 0.0009 22.0 1.3 19 51-71 16-34 (205)
62 4i95_A Putative uncharacterize 26.2 35 0.0012 20.6 1.7 17 4-20 35-51 (142)
63 2uyz_B Small ubiquitin-related 25.9 65 0.0022 16.1 2.7 17 4-20 3-19 (79)
64 3tjt_A Superoxide dismutase; m 25.7 27 0.00093 22.0 1.3 19 51-71 20-38 (208)
65 1d8j_A General transcription f 25.7 51 0.0017 18.0 2.2 16 52-67 7-22 (81)
66 1bsm_A Superoxide dismutase; o 25.6 28 0.00095 21.9 1.3 19 51-71 17-35 (201)
67 1ma1_A Superoxide dismutase; m 25.5 28 0.00095 22.0 1.3 18 52-71 24-41 (205)
68 4ath_A MITF, microphthalmia-as 25.5 48 0.0017 18.1 2.1 16 53-68 29-44 (83)
69 3f7w_A Putative fructosamine-3 25.3 1.1E+02 0.0038 18.9 4.2 18 4-21 29-46 (288)
70 2rcv_A Superoxide dismutase [M 25.1 29 0.00098 21.8 1.3 19 51-71 17-35 (202)
71 1mng_A Manganese superoxide di 24.6 30 0.001 21.8 1.3 19 51-71 18-36 (203)
72 1kkc_A Mnsod, manganese supero 24.6 29 0.001 22.1 1.3 19 51-71 30-48 (221)
73 3ak2_A Superoxide dismutase [M 24.5 30 0.001 22.0 1.3 19 51-71 21-39 (214)
74 2nyb_A Superoxide dismutase [F 24.5 30 0.001 21.6 1.3 19 51-71 16-34 (192)
75 3q9d_A Protein CPN_0803/CP_106 24.5 63 0.0021 20.0 2.7 28 8-35 156-183 (220)
76 3kdf_A Replication protein A 1 24.4 80 0.0027 18.1 3.1 66 4-70 38-111 (121)
77 1b06_A Protein (superoxide dis 24.3 30 0.001 21.9 1.3 18 52-71 24-41 (210)
78 3lio_A Iron superoxide dismuta 24.1 20 0.0007 22.4 0.5 19 51-71 16-34 (192)
79 2awp_A Iron super-oxide dismut 23.7 32 0.0011 21.6 1.3 19 51-71 17-35 (198)
80 1dt0_A Superoxide dismutase; p 23.6 32 0.0011 21.6 1.3 19 51-71 16-34 (197)
81 2blf_B SORB, sulfite\:cytochro 23.4 86 0.003 16.1 4.2 18 52-69 64-81 (81)
82 2rb6_A Uncharacterized protein 23.0 76 0.0026 16.3 2.5 15 6-20 4-18 (61)
83 2pi2_E Replication protein A 1 22.3 84 0.0029 18.6 2.9 66 4-70 59-132 (142)
84 4f2n_A Superoxide dismutase; s 22.1 32 0.0011 22.2 1.1 19 51-71 48-66 (230)
85 2cw3_A Pmsod2, iron superoxide 21.9 35 0.0012 22.7 1.3 18 52-71 94-111 (280)
86 4ffk_A Superoxide dismutase; o 21.7 36 0.0012 21.8 1.3 19 51-71 33-51 (223)
87 2cw2_A Superoxide dismutase 1; 21.6 37 0.0013 21.8 1.3 19 51-71 47-65 (226)
88 2k0q_A Putative uncharacterize 21.4 13 0.00044 20.0 -0.7 25 8-32 43-68 (74)
89 1jw2_A Hemolysin expression mo 21.1 76 0.0026 16.9 2.3 15 54-68 20-34 (72)
90 3h1s_A Superoxide dismutase; S 20.4 27 0.00091 21.9 0.5 19 51-71 20-38 (195)
No 1
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=99.95 E-value=2.5e-28 Score=142.89 Aligned_cols=67 Identities=34% Similarity=0.649 Sum_probs=60.8
Q ss_pred CCCCceEEEEeCCCcEEEeeHHHHHHhHHHHHHhcCCCCCCCCCCcccccCCCCHHHHHHHHHHHHhhccC
Q 040934 1 MKKEDTVKLISAEGFEFVISKEAAMVSQTIRNMLTSPGGFAETEHGEVTFPEISTTILEKICQYFYWSLQY 71 (72)
Q Consensus 1 m~~~~~i~L~S~Dg~~f~v~~~~a~~S~~i~~~l~~~~~~~e~~~~~Ipl~~v~~~~L~kVieyc~~h~~y 71 (72)
|+ +++|+|+|+||++|+|++++|++|++|++|+++ + + ++..++||||+|++.+|+|||+||+||++|
T Consensus 1 m~-~~~v~L~SsDg~~f~V~~~vA~~S~~ik~ml~~-~-~-e~~~~~Iplp~V~~~iL~kVieyc~~h~~~ 67 (99)
T 1hv2_A 1 MS-QDFVTLVSKDDKEYEISRSAAMISPTLKAMIEG-P-F-RESKGRIELKQFDSHILEKAVEYLNYNLKY 67 (99)
T ss_dssp CC-CSEEEEEETTTEEEEEEHHHHTTCHHHHHHHHS-S-T-TTCTTEEEETTSCHHHHHHHHHHHHHHHHH
T ss_pred CC-CcEEEEEecCCCEEEECHHHHHHhHHHHHHHhc-c-c-ccCCCceecCCcCHHHHHHHHHHHHHhccc
Confidence 67 678999999999999999999999999999998 3 3 445678999999999999999999999865
No 2
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=99.95 E-value=2.7e-28 Score=145.58 Aligned_cols=69 Identities=46% Similarity=0.850 Sum_probs=57.0
Q ss_pred CCceEEEEeCCCcEEEeeHHHHHHhHHHHHHhcCCCCCCCCCCcccccCCCCHHHHHHHHHHHHhhccC
Q 040934 3 KEDTVKLISAEGFEFVISKEAAMVSQTIRNMLTSPGGFAETEHGEVTFPEISTTILEKICQYFYWSLQY 71 (72)
Q Consensus 3 ~~~~i~L~S~Dg~~f~v~~~~a~~S~~i~~~l~~~~~~~e~~~~~Ipl~~v~~~~L~kVieyc~~h~~y 71 (72)
++++|+|+|+||++|+|++++|++|++|++|+++.+.+.|+.+++||||+|++.+|+|||+||+||++|
T Consensus 15 ~~~~v~L~SsDG~~F~V~~~~A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s~iL~kVieyc~~h~~~ 83 (112)
T 1vcb_B 15 DAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRY 83 (112)
T ss_dssp --CEEEEECTTSCEEEEEHHHHHTSHHHHHHSSCC--------CEEECSSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCEEEECHHHHHHhHHHHHHHHhcCCcccccCCceeCCCCCHHHHHHHHHHHHHhhhc
Confidence 357899999999999999999999999999999877666666689999999999999999999999875
No 3
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=99.95 E-value=3.1e-28 Score=141.76 Aligned_cols=67 Identities=48% Similarity=0.873 Sum_probs=56.3
Q ss_pred ceEEEEeCCCcEEEeeHHHHHHhHHHHHHhcCCCCCCCCCCcccccCCCCHHHHHHHHHHHHhhccC
Q 040934 5 DTVKLISAEGFEFVISKEAAMVSQTIRNMLTSPGGFAETEHGEVTFPEISTTILEKICQYFYWSLQY 71 (72)
Q Consensus 5 ~~i~L~S~Dg~~f~v~~~~a~~S~~i~~~l~~~~~~~e~~~~~Ipl~~v~~~~L~kVieyc~~h~~y 71 (72)
++|+|+|+||++|.|++++|++|++|++|+++.+.+.|+.+++||||+|++.+|+|||+||+||++|
T Consensus 1 ~~v~L~SsDg~~f~V~~~~A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~~iL~kVieyc~~h~~~ 67 (96)
T 2fnj_C 1 MYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRY 67 (96)
T ss_dssp CEEEEECTTSCEEEEEHHHHTTSHHHHHHHHCC--------CEEECSSCCHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEecCCCEEEeCHHHHHHhHHHHHHHHccCCcccccCCceeCCCCCHHHHHHHHHHHHHcccc
Confidence 4799999999999999999999999999999877666666789999999999999999999999865
No 4
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.93 E-value=1.2e-26 Score=134.79 Aligned_cols=66 Identities=48% Similarity=0.901 Sum_probs=56.2
Q ss_pred eEEEEeCCCcEEEeeHHHHHHhHHHHHHhcCCCCCCCCCCcccccCCCCHHHHHHHHHHHHhhccC
Q 040934 6 TVKLISAEGFEFVISKEAAMVSQTIRNMLTSPGGFAETEHGEVTFPEISTTILEKICQYFYWSLQY 71 (72)
Q Consensus 6 ~i~L~S~Dg~~f~v~~~~a~~S~~i~~~l~~~~~~~e~~~~~Ipl~~v~~~~L~kVieyc~~h~~y 71 (72)
+|+|+|+||++|.|++.+|++|++||+|+++.+++.|+.+++||||+|++.+|+|||+||+||++|
T Consensus 3 ~v~L~SsDg~~F~v~r~vA~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~~~iL~kViey~~~h~~~ 68 (97)
T 4ajy_C 3 YVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRY 68 (97)
T ss_dssp EEEEECTTCCEEEEEHHHHTTSHHHHHHHCCC--------CEEECTTSCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCcEEEecHHHHHHhHHHHHHHHhCCCccccCCCceECCCCCHHHHHHHHHHHHHhccc
Confidence 799999999999999999999999999999877777777889999999999999999999999876
No 5
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=99.92 E-value=7.5e-26 Score=142.76 Aligned_cols=70 Identities=23% Similarity=0.352 Sum_probs=56.9
Q ss_pred CCCCceEEEEeCCCcEEEeeHHHHHHhHHHHHHhcCCCC--CCCCCCcccccCCCCHHHHHHHHHHHHhhccC
Q 040934 1 MKKEDTVKLISAEGFEFVISKEAAMVSQTIRNMLTSPGG--FAETEHGEVTFPEISTTILEKICQYFYWSLQY 71 (72)
Q Consensus 1 m~~~~~i~L~S~Dg~~f~v~~~~a~~S~~i~~~l~~~~~--~~e~~~~~Ipl~~v~~~~L~kVieyc~~h~~y 71 (72)
|| +++|+|+|+||++|.|++++|++|++|++|+++.+. +.++..++||||+|++.+|+|||+||+||++|
T Consensus 4 m~-~~~i~L~SsDG~~F~V~~~vA~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~ 75 (169)
T 3v7d_A 4 MV-TSNVVLVSGEGERFTVDKKIAERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDS 75 (169)
T ss_dssp ---CCEEEEECTTCCEEEEEHHHHTTSHHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHHHTTTC
T ss_pred CC-CCeEEEEeCCCCEEEecHHHHHHhHHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHHHcccC
Confidence 66 579999999999999999999999999999998654 11223478999999999999999999999976
No 6
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.88 E-value=3.9e-23 Score=126.87 Aligned_cols=60 Identities=32% Similarity=0.443 Sum_probs=55.8
Q ss_pred eEEEEeCCCcEEEeeHHHHHHhHHHHHHhcCCCCCCCCCCcccccCCCCHHHHHHHHHHHHhhccC
Q 040934 6 TVKLISAEGFEFVISKEAAMVSQTIRNMLTSPGGFAETEHGEVTFPEISTTILEKICQYFYWSLQY 71 (72)
Q Consensus 6 ~i~L~S~Dg~~f~v~~~~a~~S~~i~~~l~~~~~~~e~~~~~Ipl~~v~~~~L~kVieyc~~h~~y 71 (72)
.|+|+|+||++|.|++++|++|++|++|+++.+ +++||||+|++.+|+||++||+||+++
T Consensus 3 ~v~L~SsDg~~f~v~~~vA~~S~~ik~ml~~~~------~~~Ipl~~V~~~iL~kVieyc~~h~~~ 62 (141)
T 1fs1_B 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLG------MDPVPLPNVNAAILKKVIQWCTHHKDD 62 (141)
T ss_dssp EEEEECTTSCEEEEEGGGGGTCHHHHHHHHHTC------CSSEECTTCCHHHHHHHHHHHHHHTTC
T ss_pred eEEEEeCCCCEEEecHHHHHHhHHHHHHHHhcC------CCceecCCcCHHHHHHHHHHHHHhccC
Confidence 599999999999999999999999999999753 457999999999999999999999975
No 7
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=99.86 E-value=7.8e-24 Score=132.26 Aligned_cols=65 Identities=26% Similarity=0.430 Sum_probs=29.9
Q ss_pred CCCCceEEEEeCCCcEEEeeHHHHHHhHHHHHHhcCCCCCCCCCCcccccCCCCHHHHHHHHHHHHhhccC
Q 040934 1 MKKEDTVKLISAEGFEFVISKEAAMVSQTIRNMLTSPGGFAETEHGEVTFPEISTTILEKICQYFYWSLQY 71 (72)
Q Consensus 1 m~~~~~i~L~S~Dg~~f~v~~~~a~~S~~i~~~l~~~~~~~e~~~~~Ipl~~v~~~~L~kVieyc~~h~~y 71 (72)
|+ +++|+|+|+||++|.|++.+|++|++|++|+++.+ .+++||||+|++.+|+|||+||+||++|
T Consensus 1 ~~-~~~v~L~SsDg~~f~v~~~vA~~S~~ik~ml~~~~-----~~~~Ipl~~V~~~iL~kVieyc~~h~~~ 65 (160)
T 2p1m_A 1 MS-AKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDC-----VDNGVPLPNVTSKILAKVIEYCKRHVEA 65 (160)
T ss_dssp --------CCC---------CHHHHTCTTTC-----------------CCTTSCHHHHHHHHHC-------
T ss_pred CC-CCEEEEEcCCCCEEEECHHHHHHhHHHHHHHHccC-----CCCceeCCcCcHHHHHHHHHHHHHcccC
Confidence 45 56899999999999999999999999999999753 2568999999999999999999999865
No 8
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.86 E-value=7.7e-22 Score=122.85 Aligned_cols=66 Identities=30% Similarity=0.396 Sum_probs=55.2
Q ss_pred eEEEEeCCCcEEEeeHHHHHHhHHHHHHhcCCCCCCCCCCcccccCCCCHHHHHHHHHHHHhhccC
Q 040934 6 TVKLISAEGFEFVISKEAAMVSQTIRNMLTSPGGFAETEHGEVTFPEISTTILEKICQYFYWSLQY 71 (72)
Q Consensus 6 ~i~L~S~Dg~~f~v~~~~a~~S~~i~~~l~~~~~~~e~~~~~Ipl~~v~~~~L~kVieyc~~h~~y 71 (72)
.|+|+|+||++|.|++.+|++|++|++|+++.+...|+..++||||+|++.+|+||++||+||+++
T Consensus 2 ~v~L~ssDg~~f~v~~~vA~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~ 67 (159)
T 2ast_A 2 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDD 67 (159)
T ss_dssp EEEEECTTSCEEEEEHHHHHTCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTTTC
T ss_pred eEEEEcCCCCEEEeCHHHHHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcC
Confidence 499999999999999999999999999999743221445678999999999999999999999965
No 9
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=98.36 E-value=1.8e-06 Score=49.06 Aligned_cols=59 Identities=17% Similarity=0.277 Sum_probs=47.7
Q ss_pred eEEEEeCCC---cEEEeeHHHH-HHhHHHHHHhcCCCCCCCCCCcccccCCCCHHHHHHHHHHHHh
Q 040934 6 TVKLISAEG---FEFVISKEAA-MVSQTIRNMLTSPGGFAETEHGEVTFPEISTTILEKICQYFYW 67 (72)
Q Consensus 6 ~i~L~S~Dg---~~f~v~~~~a-~~S~~i~~~l~~~~~~~e~~~~~Ipl~~v~~~~L~kVieyc~~ 67 (72)
-|+|+..+| +.|.+.+.++ ..|+.+++|+.+ .+.|.. ..|.||++++.+++.+++|++.
T Consensus 10 Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~--~~~e~~-~~i~l~~~~~~~f~~~l~~iYt 72 (109)
T 2vkp_A 10 DVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYG--DLAEVK-SEIHIPDVEPAAFLILLKYMYS 72 (109)
T ss_dssp CEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC--------C-CEEEETTSCHHHHHHHHHHHHH
T ss_pred cEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcC--CcccCC-CeEEeCCCCHHHHHHHHHHHcC
Confidence 588888886 9999999994 589999999985 345545 8899999999999999999975
No 10
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=98.18 E-value=8.9e-06 Score=47.02 Aligned_cols=59 Identities=22% Similarity=0.297 Sum_probs=46.8
Q ss_pred eEEEEeCCCcEEEeeHHH-HHHhHHHHHHhcCCCCCCCCCCcccccCCCCHHHHHHHHHHHHh
Q 040934 6 TVKLISAEGFEFVISKEA-AMVSQTIRNMLTSPGGFAETEHGEVTFPEISTTILEKICQYFYW 67 (72)
Q Consensus 6 ~i~L~S~Dg~~f~v~~~~-a~~S~~i~~~l~~~~~~~e~~~~~Ipl~~v~~~~L~kVieyc~~ 67 (72)
-|+|+. +|+.|.+.+.+ +..|+.+++|+.+. +.|.....|.|++++..+++.+++|++.
T Consensus 27 Dv~l~v-~~~~~~aHk~vLaa~S~~F~~~f~~~--~~e~~~~~i~l~~~~~~~f~~ll~~~Yt 86 (120)
T 2if5_A 27 DVVILV-EGREFPTHRSVLAACSQYFKKLFTSG--AVVDQQNVYEIDFVSAEALTALMDFAYT 86 (120)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHHC-------CCSEEECCSSCHHHHHHHHHHHHH
T ss_pred CeEEEE-CCEEEeHHHHHHHHhCHHHHHHhcCC--ccccCCceEEeCCCCHHHHHHHHHHHcC
Confidence 466665 68999999999 45799999999853 4455677899999999999999999975
No 11
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=98.13 E-value=1.1e-05 Score=48.93 Aligned_cols=60 Identities=18% Similarity=0.321 Sum_probs=50.2
Q ss_pred eEEEEeCCCcEEEeeHHH-HHHhHHHHHHhcCCCCCCCCCCcccccCCCCHHHHHHHHHHHHhh
Q 040934 6 TVKLISAEGFEFVISKEA-AMVSQTIRNMLTSPGGFAETEHGEVTFPEISTTILEKICQYFYWS 68 (72)
Q Consensus 6 ~i~L~S~Dg~~f~v~~~~-a~~S~~i~~~l~~~~~~~e~~~~~Ipl~~v~~~~L~kVieyc~~h 68 (72)
-|+|+. +|+.|.+.+.+ +..|+.+++|+... +.|.....|.||+++..+++.+++|++..
T Consensus 36 Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~--~~e~~~~~i~l~~~~~~~f~~~l~~~Yt~ 96 (172)
T 3htm_A 36 DCCLCV-AGQEFQAHKAILAARSPVFSAMFEHE--MEESKKNRVEINDVEPEVFKEMMCFIYTG 96 (172)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSC--CCGGGTTEEEECSSCHHHHHHHHHHHHHS
T ss_pred ceEEEE-CCEEEEeeHHHHHHcCHHHHHHHccC--ccccCCCeEEecCCCHHHHHHHHHHHhCC
Confidence 366665 78999999999 46799999999953 45556788999999999999999999753
No 12
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=98.10 E-value=1e-05 Score=48.64 Aligned_cols=61 Identities=21% Similarity=0.300 Sum_probs=47.0
Q ss_pred eEEEEeCCCcEEEeeHHH-HHHhHHHHHHhcCCCCCCCCCCcccccCCCCHHHHHHHHHHHHh
Q 040934 6 TVKLISAEGFEFVISKEA-AMVSQTIRNMLTSPGGFAETEHGEVTFPEISTTILEKICQYFYW 67 (72)
Q Consensus 6 ~i~L~S~Dg~~f~v~~~~-a~~S~~i~~~l~~~~~~~e~~~~~Ipl~~v~~~~L~kVieyc~~ 67 (72)
-|+|+. +|+.|.+.+.+ +..|+.+++|+.......+.....|.|++++..+++.+++|++-
T Consensus 49 Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~~~~f~~lL~fiYt 110 (144)
T 2ppi_A 49 DAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFS 110 (144)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSCHHHHHHHHHHHTT
T ss_pred ceEEEE-CCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCCHHHHHHHHHHHhC
Confidence 366665 68999999998 55799999999853221224567899999999999999999974
No 13
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=98.01 E-value=4e-05 Score=44.68 Aligned_cols=58 Identities=16% Similarity=0.271 Sum_probs=48.2
Q ss_pred eEEEEeCCCcEEEeeHHHH-HHhHHHHHHhcCCCCCCCCCCccccc-CCCCHHHHHHHHHHHHh
Q 040934 6 TVKLISAEGFEFVISKEAA-MVSQTIRNMLTSPGGFAETEHGEVTF-PEISTTILEKICQYFYW 67 (72)
Q Consensus 6 ~i~L~S~Dg~~f~v~~~~a-~~S~~i~~~l~~~~~~~e~~~~~Ipl-~~v~~~~L~kVieyc~~ 67 (72)
-|+|+. +|+.|.+.+.++ ..|+.+++|+... +.| ....|.| ++++..+++.+++|++.
T Consensus 31 Dv~l~v-~~~~~~aHk~iLaa~S~~F~~~f~~~--~~e-~~~~i~l~~~~~~~~f~~ll~~~Yt 90 (127)
T 1r29_A 31 DVVIVV-SREQFRAHKTVLMACSGLFYSIFTDQ--LKR-NLSVINLDPEINPEGFNILLDFMYT 90 (127)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHTST--TTT-TCSEEECCTTSCHHHHHHHHHHHHH
T ss_pred CEEEEE-CCEEEehHHHHHHHhCHHHHHHhcCC--ccC-CCCEEEeCCCCCHHHHHHHHHHHcC
Confidence 466665 589999999995 7899999999863 334 5677999 89999999999999975
No 14
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=97.99 E-value=9.9e-06 Score=47.84 Aligned_cols=60 Identities=17% Similarity=0.301 Sum_probs=49.3
Q ss_pred eEEEEeCCCcEEEeeHHHH-HHhHHHHHHhcCCCCCCCCCCcccccCCCCHHHHHHHHHHHHhh
Q 040934 6 TVKLISAEGFEFVISKEAA-MVSQTIRNMLTSPGGFAETEHGEVTFPEISTTILEKICQYFYWS 68 (72)
Q Consensus 6 ~i~L~S~Dg~~f~v~~~~a-~~S~~i~~~l~~~~~~~e~~~~~Ipl~~v~~~~L~kVieyc~~h 68 (72)
-|+|+. +|+.|.+.+.++ ..|+.++.|+... +.|.....|.||+++..+++.+++|++..
T Consensus 27 Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~--~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~ 87 (145)
T 4eoz_A 27 DCCLCV-AGQEFQAHKAILAARSPVFSAMFEHE--MEESKKNRVEINDVEPEVFKEMMCFIYTG 87 (145)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSS--SHHHHHTEEEECSSCHHHHHHHHHHHHHS
T ss_pred ceEEEE-CCEEEEeehHHHHHcCHHHHHHHcCC--CcCCCCceEEecCCCHHHHHHHHHhhccC
Confidence 366665 689999999995 6799999999853 44445678999999999999999999753
No 15
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=97.96 E-value=5.4e-05 Score=44.01 Aligned_cols=57 Identities=25% Similarity=0.297 Sum_probs=47.1
Q ss_pred eEEEEeCCCcEEEeeHHH-HHHhHHHHHHhcCCCCCCCCCCcccccCC-CCHHHHHHHHHHHHh
Q 040934 6 TVKLISAEGFEFVISKEA-AMVSQTIRNMLTSPGGFAETEHGEVTFPE-ISTTILEKICQYFYW 67 (72)
Q Consensus 6 ~i~L~S~Dg~~f~v~~~~-a~~S~~i~~~l~~~~~~~e~~~~~Ipl~~-v~~~~L~kVieyc~~ 67 (72)
-|+|+. +|+.|.+.+.+ +..|+.+++|+..... +...|.+|+ ++..+++.+++|++.
T Consensus 34 Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~~----e~~~i~l~~~~~~~~f~~~l~~iYt 92 (125)
T 3ohu_A 34 DVTLIV-ERKEFRAHRAVLAACSEYFWQALVGQTK----NDLVVSLPEEVTARGFGPLLQFAYT 92 (125)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTCCC----SSCEEECCTTCCHHHHHHHHHHHTT
T ss_pred ceEEEE-CCEEEechHHHHHHcCHHHHHHhcCCCC----CCcEEEeCCCCCHHHHHHHHHhHcC
Confidence 366765 68999999999 5579999999986432 366799998 999999999999874
No 16
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=97.86 E-value=7.4e-05 Score=43.30 Aligned_cols=54 Identities=19% Similarity=0.281 Sum_probs=46.0
Q ss_pred eEEEEeCCCcEEEeeHHH-HHHhHHHHHHhcCCCCCCCCCCcccccCCCCHHHHHHHHHHHHh
Q 040934 6 TVKLISAEGFEFVISKEA-AMVSQTIRNMLTSPGGFAETEHGEVTFPEISTTILEKICQYFYW 67 (72)
Q Consensus 6 ~i~L~S~Dg~~f~v~~~~-a~~S~~i~~~l~~~~~~~e~~~~~Ipl~~v~~~~L~kVieyc~~ 67 (72)
-|+|+. +|+.|.+.+.+ +..|+.+++|+.+. ...|.|+++++.+++.+++|++.
T Consensus 30 Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~-------~~~i~l~~~~~~~f~~ll~~~Yt 84 (121)
T 1buo_A 30 DVVIMV-DSQEFHAHRTVLACTSKMFEILFHRN-------SQHYTLDFLSPKTFQQILEYAYT 84 (121)
T ss_dssp CEEEEE-SSCEEEECHHHHHHHCHHHHHHTTSC-------CSEEEECSSCHHHHHHHHHHHHH
T ss_pred CEEEEE-CCEEEehhHHHHhhcCHHHHHHHcCC-------CcEEEeCCCCHHHHHHHHHhhcC
Confidence 466665 68999999999 57899999999852 45799999999999999999975
No 17
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=97.86 E-value=0.00012 Score=42.03 Aligned_cols=55 Identities=15% Similarity=0.320 Sum_probs=44.0
Q ss_pred eEEEEeCCCcEEEeeHHH-HHHhHHHHHHhcCCCCCCCCCCcccccC--CCCHHHHHHHHHHHHh
Q 040934 6 TVKLISAEGFEFVISKEA-AMVSQTIRNMLTSPGGFAETEHGEVTFP--EISTTILEKICQYFYW 67 (72)
Q Consensus 6 ~i~L~S~Dg~~f~v~~~~-a~~S~~i~~~l~~~~~~~e~~~~~Ipl~--~v~~~~L~kVieyc~~ 67 (72)
-|+|+. +|+.|.+.+.+ +..|+.++.|+...+ ...|.|+ ++++.+++.+++|++.
T Consensus 24 Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~~~------~~~i~l~~~~~~~~~f~~ll~~~Yt 81 (116)
T 2vpk_A 24 DCTIVI-GEFQFKAHRNVLASFSEYFGAIYRSTS------ENNVFLDQSQVKADGFQKLLEFIYT 81 (116)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTCC------CSCEECCTTTCCHHHHHHHHHHHHH
T ss_pred cEEEEE-CCEEEeccHHHHhhcCHHHHHHHcCCC------CCeEEeecCCCCHHHHHHHHHHHcC
Confidence 366665 68999999999 578999999998641 3345555 9999999999999975
No 18
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=97.85 E-value=5.8e-05 Score=43.71 Aligned_cols=55 Identities=20% Similarity=0.285 Sum_probs=46.1
Q ss_pred eEEEEeCCCcEEEeeHHH-HHHhHHHHHHhcCCCCCCCCCCcccccCCCCHHHHHHHHHHHHh
Q 040934 6 TVKLISAEGFEFVISKEA-AMVSQTIRNMLTSPGGFAETEHGEVTFPEISTTILEKICQYFYW 67 (72)
Q Consensus 6 ~i~L~S~Dg~~f~v~~~~-a~~S~~i~~~l~~~~~~~e~~~~~Ipl~~v~~~~L~kVieyc~~ 67 (72)
-|+|+. +|+.|.+.+.+ +..|+.++.|+.... ...|.||++++.+++.+++|++.
T Consensus 26 Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~------~~~i~l~~~~~~~f~~ll~~iYt 81 (119)
T 3b84_A 26 DATLDV-GGLVFKAHWSVLACCSHFFQSLYGDGS------GGSVVLPAGFAEIFGLLLDFFYT 81 (119)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTTT------CCCEEECGGGHHHHHHHHHHHHH
T ss_pred ceEEEE-CCEEEEeeHHHHhhcCHHHHHHHCCCC------CCeEEeCCCCHHHHHHHHHHHcC
Confidence 366664 68999999998 567999999998632 56799999999999999999975
No 19
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=97.84 E-value=6.9e-05 Score=43.89 Aligned_cols=55 Identities=18% Similarity=0.411 Sum_probs=46.4
Q ss_pred eEEEEeCCCcEEEeeHHH-HHHhHHHHHHhcCCCCCCCCCCcccccC-CCCHHHHHHHHHHHHh
Q 040934 6 TVKLISAEGFEFVISKEA-AMVSQTIRNMLTSPGGFAETEHGEVTFP-EISTTILEKICQYFYW 67 (72)
Q Consensus 6 ~i~L~S~Dg~~f~v~~~~-a~~S~~i~~~l~~~~~~~e~~~~~Ipl~-~v~~~~L~kVieyc~~ 67 (72)
-|+|+. +|+.|.+.+.+ +..|+.+++|+... ....|.|| ++++.+++.+++|++.
T Consensus 35 Dv~l~v-~~~~~~~Hk~vLaa~S~~F~~~f~~~------~~~~i~l~~~~~~~~f~~ll~~iYt 91 (129)
T 3ga1_A 35 DVSVVV-KGHAFKAHRAVLAASSSYFRDLFNNS------RSAVVELPAAVQPQSFQQILSFCYT 91 (129)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHBHHHHHHHHHC------CCSEEECCTTCCHHHHHHHHHHHHH
T ss_pred ceEEEE-CCEEEEehHHHHHHcCHHHHHHHcCC------CCCEEEECCCCCHHHHHHHHHHHhC
Confidence 366665 79999999998 55799999999864 35679998 8999999999999975
No 20
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=97.78 E-value=4.4e-05 Score=45.24 Aligned_cols=56 Identities=20% Similarity=0.268 Sum_probs=45.0
Q ss_pred eEEEEeCCCcEEEeeHHH-HHHhHHHHHHhcCCCCCCCCCCcccccCCCCHHHHHHHHHHHHhh
Q 040934 6 TVKLISAEGFEFVISKEA-AMVSQTIRNMLTSPGGFAETEHGEVTFPEISTTILEKICQYFYWS 68 (72)
Q Consensus 6 ~i~L~S~Dg~~f~v~~~~-a~~S~~i~~~l~~~~~~~e~~~~~Ipl~~v~~~~L~kVieyc~~h 68 (72)
-|+|+. +|+.|.+.+.+ +..|..+++|+.... ...|.|++++..+++.+++|++.-
T Consensus 27 Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~~------~~~i~l~~~~~~~f~~lL~fiYtg 83 (135)
T 2yy9_A 27 DATLDV-GGLVFKAHWSVLACCSHFFQRIYGDGT------GGSVVLPAGFAEIFGLLLDFFYTG 83 (135)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHTCC----------CCEEECGGGHHHHHHHHHHHHHS
T ss_pred ceEEEE-CCEEEehHHHHHHHhCHHHHHHHcCCC------CCeEEeCCCCHHHHHHHHHHHhCC
Confidence 366665 68999999998 667999999998531 456999999999999999999853
No 21
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=97.75 E-value=0.00012 Score=42.31 Aligned_cols=54 Identities=22% Similarity=0.313 Sum_probs=45.7
Q ss_pred eEEEEeCCCcEEEeeHHH-HHHhHHHHHHhcCCCCCCCCCCcccccCCCCHHHHHHHHHHHHh
Q 040934 6 TVKLISAEGFEFVISKEA-AMVSQTIRNMLTSPGGFAETEHGEVTFPEISTTILEKICQYFYW 67 (72)
Q Consensus 6 ~i~L~S~Dg~~f~v~~~~-a~~S~~i~~~l~~~~~~~e~~~~~Ipl~~v~~~~L~kVieyc~~ 67 (72)
-|+|+. +|+.|.+.+.+ +..|+.+++|+... ...|.|+++++.+++.+++|++-
T Consensus 33 Dv~l~v-~~~~f~aHk~vLaa~S~~F~~~f~~~-------~~~i~l~~~~~~~f~~~l~~~Yt 87 (116)
T 3fkc_A 33 DVTVIV-EDRKFRAHKNILSASSTYFHQLFSVA-------GQVVELSFIRAEIFAEILNYIYS 87 (116)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHTTSC-------CSEEEECSSCHHHHHHHHHHHTT
T ss_pred eEEEEE-CCEEEehhHHHHHHcCHHHHHHHcCC-------CCEEEeCCCCHHHHHHHHHhhcC
Confidence 366664 78999999999 57799999999853 45799999999999999999874
No 22
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=97.73 E-value=0.0001 Score=48.58 Aligned_cols=59 Identities=19% Similarity=0.322 Sum_probs=47.2
Q ss_pred eEEEEeCCCcEEEeeHHH-HHHhHHHHHHhcCCCCCCCCCCcccccCCCCHHHHHHHHHHHHh
Q 040934 6 TVKLISAEGFEFVISKEA-AMVSQTIRNMLTSPGGFAETEHGEVTFPEISTTILEKICQYFYW 67 (72)
Q Consensus 6 ~i~L~S~Dg~~f~v~~~~-a~~S~~i~~~l~~~~~~~e~~~~~Ipl~~v~~~~L~kVieyc~~ 67 (72)
-|+|.. +|+.|.+.+.+ |.+|+.+++|+.. .+.|.....|.|+++++.+++.+++|++.
T Consensus 176 Dv~l~v-~~~~f~~Hk~vLaa~S~~F~~~f~~--~~~e~~~~~i~l~~~~~~~f~~~L~~iYt 235 (312)
T 3hqi_A 176 DCCLCV-AGQEFQAHKAILAARSPVFSAMFEH--EMEESKKNRVEINDVEPEVFKEMMCFIYT 235 (312)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHTTC-------CCSEEEECSSCHHHHHHHHHHHHH
T ss_pred ceEEEE-CCEEEeHHHHHHHHcCHHHHHHhcc--CccccCCceEEecCCCHHHHHHHHHhhcC
Confidence 466665 78999999999 5779999999985 35566678899999999999999999975
No 23
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=97.63 E-value=8.8e-05 Score=47.78 Aligned_cols=61 Identities=20% Similarity=0.280 Sum_probs=44.0
Q ss_pred eEEEEeCCCcEEEeeHHHHH-HhHHHHHHhcCCCCCCCCCCcccccCCCCHHHHHHHHHHHHh
Q 040934 6 TVKLISAEGFEFVISKEAAM-VSQTIRNMLTSPGGFAETEHGEVTFPEISTTILEKICQYFYW 67 (72)
Q Consensus 6 ~i~L~S~Dg~~f~v~~~~a~-~S~~i~~~l~~~~~~~e~~~~~Ipl~~v~~~~L~kVieyc~~ 67 (72)
-|+|.. +|+.|.+.+.++. .|+.++.|+.......|.....|+++++++.+++.+++|++.
T Consensus 33 Dv~l~v-~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~f~~ll~~~Yt 94 (256)
T 3hve_A 33 DAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFS 94 (256)
T ss_dssp CEEEEE-TTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCCHHHHHHHHHHHHH
T ss_pred ceEEEE-CCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCCHHHHHHHHhhccC
Confidence 466665 6899999999955 699999999853221234567899999999999999999975
No 24
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=97.62 E-value=0.00036 Score=41.23 Aligned_cols=57 Identities=23% Similarity=0.343 Sum_probs=46.2
Q ss_pred eEEEEeCCCcEEEeeHHH-HHHhHHHHHHhcCCCCCCCCCCcccccC-CCCHHHHHHHHHHHHh
Q 040934 6 TVKLISAEGFEFVISKEA-AMVSQTIRNMLTSPGGFAETEHGEVTFP-EISTTILEKICQYFYW 67 (72)
Q Consensus 6 ~i~L~S~Dg~~f~v~~~~-a~~S~~i~~~l~~~~~~~e~~~~~Ipl~-~v~~~~L~kVieyc~~ 67 (72)
-|+|+. +|+.|.+.+.+ +..|+.++.|+.... . +...|.+| +++...++.+++|++.
T Consensus 38 Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~--~--e~~~i~l~~~v~~~~~~~lL~~~Yt 96 (138)
T 2z8h_A 38 DVTVLV-EGQRFRAHRSVLAACSSYFHSRIVGQT--D--AELTVTLPEEVTVKGFEPLIQFAYT 96 (138)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTCC--C--TTEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CeEEEE-CCEEEechHHHHHHcCHHHHHHHhcCC--C--CCceEEeCCCCCHHHHHHHHHHhcC
Confidence 366665 58999999999 467999999998642 2 24578886 8999999999999975
No 25
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=97.62 E-value=0.00032 Score=40.80 Aligned_cols=57 Identities=21% Similarity=0.347 Sum_probs=45.0
Q ss_pred eEEEEeCCCcEEEeeHHH-HHHhHHHHHHhcCCCCCCCCCCcccccC-CCCHHHHHHHHHHHHh
Q 040934 6 TVKLISAEGFEFVISKEA-AMVSQTIRNMLTSPGGFAETEHGEVTFP-EISTTILEKICQYFYW 67 (72)
Q Consensus 6 ~i~L~S~Dg~~f~v~~~~-a~~S~~i~~~l~~~~~~~e~~~~~Ipl~-~v~~~~L~kVieyc~~ 67 (72)
-|+|+. +|+.|.+.+.+ +..|+.+++|+.+.. . +...|.+| +++...++.+++|++.
T Consensus 31 Dv~l~v-~~~~~~aHk~vLaa~S~yF~~mf~~~~--~--e~~~i~l~~~v~~~~f~~lL~~iYt 89 (124)
T 2ihc_A 31 DVTIFV-EGQRFRAHRSVLAACSSYFHSRIVGQA--D--GELNITLPEEVTVKGFEPLIQFAYT 89 (124)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTC-------CEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CEEEEE-CCEEEecHHHHHHHcCHHHHHHHcCCC--C--CCceEeecCCcCHHHHHHHHHHhcC
Confidence 366665 58999999999 567999999998642 2 24568886 8999999999999975
No 26
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=97.59 E-value=0.00024 Score=41.01 Aligned_cols=54 Identities=15% Similarity=0.293 Sum_probs=45.3
Q ss_pred eEEEEeCCCcEEEeeHHH-HHHhHHHHHHhcCCCCCCCCCCcccccCCCCHHHHHHHHHHHHh
Q 040934 6 TVKLISAEGFEFVISKEA-AMVSQTIRNMLTSPGGFAETEHGEVTFPEISTTILEKICQYFYW 67 (72)
Q Consensus 6 ~i~L~S~Dg~~f~v~~~~-a~~S~~i~~~l~~~~~~~e~~~~~Ipl~~v~~~~L~kVieyc~~ 67 (72)
-|+|+. +|+.|.+.+.+ +..|+.+++|+.+. ...|.+++++..+++.+++|++.
T Consensus 29 Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~~-------~~~i~l~~~~~~~f~~ll~~~Yt 83 (119)
T 2q81_A 29 DCTFVV-DGVHFKAHKAVLAACSEYFKMLFVDQ-------KDVVHLDISNAAGLGQVLEFMYT 83 (119)
T ss_dssp CEEEEE-TTEEEEECHHHHHHHCHHHHHHHHHC-------CSGGGGGGCCHHHHHHHHHHHHH
T ss_pred ceEEEE-CCEEEehhHHHHHHcCHHHHHHHcCC-------CCEEEeCCCCHHHHHHHHHHHcC
Confidence 466664 68999999999 55799999999852 45688999999999999999975
No 27
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=97.56 E-value=6.7e-05 Score=48.96 Aligned_cols=60 Identities=20% Similarity=0.375 Sum_probs=43.5
Q ss_pred eEEEEeC--CCcEEEeeHHHHH-HhHHHHHHhcCCCCCCCCCCcccccC------CCCHHHHHHHHHHHHh
Q 040934 6 TVKLISA--EGFEFVISKEAAM-VSQTIRNMLTSPGGFAETEHGEVTFP------EISTTILEKICQYFYW 67 (72)
Q Consensus 6 ~i~L~S~--Dg~~f~v~~~~a~-~S~~i~~~l~~~~~~~e~~~~~Ipl~------~v~~~~L~kVieyc~~ 67 (72)
-|+|+.. ||+.|.+.+.++. .|+.++.|+.+ ++.|.....|.|+ ++++.+++.+++|++.
T Consensus 34 Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~--~~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Yt 102 (279)
T 3i3n_A 34 DITLCFGGAGGREFRAHRSVLAAATEYFTPLLSG--QFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYT 102 (279)
T ss_dssp CEEEECC----CEEEECHHHHHHHCTTSGGGCCC----------EEECCCCSSTTCSCHHHHHHHHHHHHH
T ss_pred CeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcC--CCccccCCeEEeccccccCCCCHHHHHHHHHhhCc
Confidence 4677765 7999999999954 69999999975 3556567789998 8999999999999975
No 28
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=96.14 E-value=0.0028 Score=36.77 Aligned_cols=50 Identities=16% Similarity=0.119 Sum_probs=39.3
Q ss_pred eEEEEeCCCcEEEeeHHHHH-HhHHHHHHhcCCCCCCCCCCcccccCCCCHHHHHHHHHHHHh
Q 040934 6 TVKLISAEGFEFVISKEAAM-VSQTIRNMLTSPGGFAETEHGEVTFPEISTTILEKICQYFYW 67 (72)
Q Consensus 6 ~i~L~S~Dg~~f~v~~~~a~-~S~~i~~~l~~~~~~~e~~~~~Ipl~~v~~~~L~kVieyc~~ 67 (72)
-|+|+. +|+.|.+.+.++. .|..++. ....|.|++|++.+++.+++|++.
T Consensus 32 Dv~l~v-~~~~f~aHk~vLaa~S~yF~~-----------~~~~i~l~~v~~~~f~~ll~fiYt 82 (119)
T 3m5b_A 32 DTLITV-GSQEFPAHSLVLAGVSQQLGR-----------RGQWALGEGISPSTFAQLLNFVYG 82 (119)
T ss_dssp CEEEEE-TTEEEEECHHHHHTTCGGGCC-----------CEEEECCSSCCHHHHHHHHHHHTT
T ss_pred ceEEEE-CCEEEeeEHHHHHHcCHHHhc-----------CCCEEEeCCCCHHHHHHHHHHHcC
Confidence 366665 7999999999954 4666552 245689999999999999999874
No 29
>1xb4_A VPS25, hypothetical 23.6 kDa protein in YUH1-URA8 intergenic region; winged helix, unknown function; 3.10A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54 PDB: 1w7p_B 1u5t_C
Probab=72.56 E-value=1.7 Score=27.67 Aligned_cols=13 Identities=23% Similarity=0.233 Sum_probs=11.3
Q ss_pred HHHHHHHHhhccC
Q 040934 59 EKICQYFYWSLQY 71 (72)
Q Consensus 59 ~kVieyc~~h~~y 71 (72)
..|+.||.||+-|
T Consensus 32 ~LIL~ycr~~ki~ 44 (202)
T 1xb4_A 32 DIISQYCKTKKIW 44 (202)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHhCee
Confidence 5699999999876
No 30
>3cuq_C Vacuolar protein-sorting-associated protein 25; ESCRT, MBV, VPS, nucleus, protein transport, transc transcription regulation, transport, endosome; 2.61A {Homo sapiens} PDB: 2zme_C
Probab=68.93 E-value=2.3 Score=26.51 Aligned_cols=13 Identities=8% Similarity=0.008 Sum_probs=11.3
Q ss_pred HHHHHHHHhhccC
Q 040934 59 EKICQYFYWSLQY 71 (72)
Q Consensus 59 ~kVieyc~~h~~y 71 (72)
..|+.||.||+.|
T Consensus 35 ~LIl~ycr~~k~~ 47 (176)
T 3cuq_C 35 SLVLSFCRLHKQS 47 (176)
T ss_dssp HHHHHHHHHHTCC
T ss_pred HHHHHHHHHhCee
Confidence 5699999999876
No 31
>2xuv_A HDEB, 10K-L protein; unknown function; HET: MLY; 1.50A {Escherichia coli}
Probab=63.47 E-value=3 Score=22.79 Aligned_cols=25 Identities=24% Similarity=0.286 Sum_probs=19.0
Q ss_pred cccccCCCCHHHHHHHHHHHHhhcc
Q 040934 46 GEVTFPEISTTILEKICQYFYWSLQ 70 (72)
Q Consensus 46 ~~Ipl~~v~~~~L~kVieyc~~h~~ 70 (72)
+.+++.++.-..-.+|++||..|-+
T Consensus 39 D~vd~~~~e~~~~Pkvie~Ckk~P~ 63 (79)
T 2xuv_A 39 DTVTLNETDLTQIPXVIEYCXXNPQ 63 (79)
T ss_dssp SBCCCCHHHHHHHHHHHHHHHHCTT
T ss_pred CccchhhhhhhcccHHHHHHhcCCc
Confidence 3677766666668999999998753
No 32
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=61.95 E-value=14 Score=20.51 Aligned_cols=61 Identities=13% Similarity=0.221 Sum_probs=40.9
Q ss_pred ceEEEEeCCCcEEEeeHHHHHHh--HHHHHHhcCCCCCC--CCCCcccccCCCCHHHHHHHHHHHHh
Q 040934 5 DTVKLISAEGFEFVISKEAAMVS--QTIRNMLTSPGGFA--ETEHGEVTFPEISTTILEKICQYFYW 67 (72)
Q Consensus 5 ~~i~L~S~Dg~~f~v~~~~a~~S--~~i~~~l~~~~~~~--e~~~~~Ipl~~v~~~~L~kVieyc~~ 67 (72)
+.|+|- -.|+.|.+.++.+..- ..+..|+.....+. .+..+.+=+ +-++...+.|+.|+..
T Consensus 6 ~~v~LN-VGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRdp~~F~~IL~~lr~ 70 (107)
T 3drz_A 6 KWVRLN-VGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRH 70 (107)
T ss_dssp CEEEEE-ETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSCHHHHHHHHHHHHH
T ss_pred CEEEEE-ECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCChHHHHHHHHHhCC
Confidence 344443 4599999999998764 35677776432111 123455655 6899999999999875
No 33
>3phx_B Ubiquitin-like protein ISG15; OTU domain, DE-ubiquitinase, DE-isgylase, hydrolase-protein complex; 1.60A {Homo sapiens}
Probab=61.84 E-value=7.8 Score=19.84 Aligned_cols=35 Identities=6% Similarity=0.094 Sum_probs=21.1
Q ss_pred CCCCceEEEEeCCCcEEEeeHHHHHHhHHHHHHhc
Q 040934 1 MKKEDTVKLISAEGFEFVISKEAAMVSQTIRNMLT 35 (72)
Q Consensus 1 m~~~~~i~L~S~Dg~~f~v~~~~a~~S~~i~~~l~ 35 (72)
|++...|.+++.+|+.|.++-..-..-..|+..+.
T Consensus 1 ~~~~m~i~Vk~~~g~~~~~~v~~~~tV~~lK~~i~ 35 (79)
T 3phx_B 1 MDEPLSILVRNNKGRSSTYEVRLTQTVAHLKQQVS 35 (79)
T ss_dssp --CCEEEEEECTTSCEEEEEECTTSBHHHHHHHHH
T ss_pred CCCCEEEEEEeCCCCEEEEEECCcChHHHHHHHHH
Confidence 66677899999999998876433222233444443
No 34
>2pjh_A Protein NPL4, nuclear protein localization protein 4 homolog; UFD1, NPL4, AAA, protein binding, transport protein; NMR {Mus musculus}
Probab=52.83 E-value=6.7 Score=20.91 Aligned_cols=19 Identities=21% Similarity=0.295 Sum_probs=14.4
Q ss_pred CCCCceEEEEeCCCcEEEee
Q 040934 1 MKKEDTVKLISAEGFEFVIS 20 (72)
Q Consensus 1 m~~~~~i~L~S~Dg~~f~v~ 20 (72)
|+....++++|.|| .++|+
T Consensus 1 ~~~~m~lRvrs~~G-~~Ri~ 19 (80)
T 2pjh_A 1 MAESIIIRVQSPDG-VKRIT 19 (80)
T ss_dssp -CCCCCCEEECSSE-EEECC
T ss_pred CCCcEEEEEECCCC-CEEEE
Confidence 66667799999999 56665
No 35
>2hj8_A Interferon-induced 17 kDa protein; HR2873B, human ISG15, structure, northeast structural genomics consortium, protein structure initiative, NESG; NMR {Homo sapiens}
Probab=48.30 E-value=17 Score=19.16 Aligned_cols=20 Identities=10% Similarity=0.094 Sum_probs=15.6
Q ss_pred CCCCceEEEEeCCCcEEEee
Q 040934 1 MKKEDTVKLISAEGFEFVIS 20 (72)
Q Consensus 1 m~~~~~i~L~S~Dg~~f~v~ 20 (72)
|+....|.+++.+|+.|.++
T Consensus 1 m~~~m~I~Vk~~~g~~~~~~ 20 (88)
T 2hj8_A 1 MDEPLSILVRNNKGRSSTYE 20 (88)
T ss_dssp -CCEEEEEEEETTSCEEEEE
T ss_pred CCccEEEEEECCCCCEEEEE
Confidence 66667899999999988765
No 36
>3r2c_J Protein NUSE, 30S ribosomal protein S10; cross species NUSB-NUSE-RNA interaction; HET: PEG; 1.90A {Aquifex aeolicus} PDB: 3r2d_J
Probab=45.18 E-value=18 Score=19.68 Aligned_cols=42 Identities=21% Similarity=0.422 Sum_probs=19.8
Q ss_pred CCCCc-eEEEEeCCCcEEEeeHHHHHHhHHHHHHhcCCCCCCCCCCcccccC
Q 040934 1 MKKED-TVKLISAEGFEFVISKEAAMVSQTIRNMLTSPGGFAETEHGEVTFP 51 (72)
Q Consensus 1 m~~~~-~i~L~S~Dg~~f~v~~~~a~~S~~i~~~l~~~~~~~e~~~~~Ipl~ 51 (72)
|+..+ .|+|.|-|-.. ++.. +.-|.+.....|. .-.+|||||
T Consensus 1 ~~~~kiRI~L~S~d~~~--Ld~~----~~~Iv~~ak~~g~---~v~GPipLP 43 (83)
T 3r2c_J 1 MEQEKIRIKLRAYDHRL--LDQS----VKQIIETVKRTGG---VVKGPIPLP 43 (83)
T ss_dssp --CCCEEEEEEESCHHH--HHHH----HHHHHHHHHHTTC---EEEEEEEEE
T ss_pred CCCcEEEEEEEECCHHH--HHHH----HHHHHHHHHHhCC---eeeCCcCCC
Confidence 45433 68888888221 2222 2333333332232 136788987
No 37
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=42.87 E-value=9.3 Score=21.83 Aligned_cols=64 Identities=14% Similarity=0.198 Sum_probs=36.5
Q ss_pred CCCCceEEEEeCCCcEEEeeHHHHHHh--HHHHHHhcCCCCCCCCCCcccccCCCCHHHHHHHHHHHHh
Q 040934 1 MKKEDTVKLISAEGFEFVISKEAAMVS--QTIRNMLTSPGGFAETEHGEVTFPEISTTILEKICQYFYW 67 (72)
Q Consensus 1 m~~~~~i~L~S~Dg~~f~v~~~~a~~S--~~i~~~l~~~~~~~e~~~~~Ipl~~v~~~~L~kVieyc~~ 67 (72)
|+++..|+|-= .|..|.+.+..+..- ..+..|+.....+ .+..+.+=+ +=++...+.|+.|+..
T Consensus 1 m~~~~~V~LNV-GG~~f~T~~~TL~~~P~s~L~~l~~~~~~~-~~~~g~~Fi-DRdp~~F~~ILnylR~ 66 (115)
T 3kvt_A 1 MDAENRVIINV-GGIRHETYKATLKKIPATRLSRLTEGMLNY-DPVLNEYFF-DRHPGVFAQIINYYRS 66 (115)
T ss_dssp ---CCEEEEEE-TTEEEEEEHHHHTTSCSSTTTTCCTTSTTE-ETTTTEEEE-CSCTTTHHHHHHHHHH
T ss_pred CCCCCEEEEEE-CCEEEEecHHHHhcCCCccHHHHhcCCCCC-CCCCCcEEE-ecChHHHHHHHHHhcC
Confidence 77667777654 499999999887653 2234444322111 123444544 4677777777777654
No 38
>3gox_A Restriction endonuclease HPY99I; endonuclease-DNA complex, restriction enzyme, HPY99I, pseudopalindrome; HET: 1PE; 1.50A {Helicobacter pylori} PDB: 3fc3_A*
Probab=42.17 E-value=18 Score=23.09 Aligned_cols=17 Identities=24% Similarity=0.243 Sum_probs=15.0
Q ss_pred CCHHHHHHHHHHHHhhc
Q 040934 53 ISTTILEKICQYFYWSL 69 (72)
Q Consensus 53 v~~~~L~kVieyc~~h~ 69 (72)
=+...|+++++|++.|.
T Consensus 183 Dnp~~L~rai~YLe~H~ 199 (200)
T 3gox_A 183 DNPKFLEKVIEYLKKYE 199 (200)
T ss_dssp TCHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHhcc
Confidence 46799999999999986
No 39
>1dj8_A HDEA, protein HNS-dependent expression A; alpha helical, structural protein; 2.00A {Escherichia coli} SCOP: a.57.1.1 PDB: 1bg8_A
Probab=39.72 E-value=19 Score=19.88 Aligned_cols=24 Identities=21% Similarity=0.116 Sum_probs=16.4
Q ss_pred cccccCCCCHHHHHHHHHHHHhhcc
Q 040934 46 GEVTFPEISTTILEKICQYFYWSLQ 70 (72)
Q Consensus 46 ~~Ipl~~v~~~~L~kVieyc~~h~~ 70 (72)
..|-+..+.- +-.+|++||..|..
T Consensus 48 ~vvD~~~~e~-v~P~vve~Ckk~P~ 71 (89)
T 1dj8_A 48 AVLDVQGIAT-VTPAIVQACTQDKQ 71 (89)
T ss_dssp CCCCHHHHHH-HHHHHHHHHHTTTT
T ss_pred ceeehhHHHH-hhHHHHHHHHhCch
Confidence 3466644443 48999999998753
No 40
>1got_G GT-gamma; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: a.137.3.1 PDB: 1tbg_E 2trc_G 1b9y_B 1b9x_B 1a0r_G*
Probab=38.91 E-value=23 Score=18.85 Aligned_cols=17 Identities=12% Similarity=-0.029 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHhhccC
Q 040934 55 TTILEKICQYFYWSLQY 71 (72)
Q Consensus 55 ~~~L~kVieyc~~h~~y 71 (72)
|....-++.||+.|..+
T Consensus 41 S~aa~~L~~Yce~~~~~ 57 (73)
T 1got_G 41 SKCCEEFRDYVEERSGE 57 (73)
T ss_dssp HHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHhcCCC
Confidence 56778889999988543
No 41
>2ra2_A Putative lipoprotein; X-RAY, NESG, STR88A, Q7CPV8, structural genomics, PSI-2, protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.38.1.6
Probab=37.17 E-value=26 Score=18.30 Aligned_cols=19 Identities=16% Similarity=0.225 Sum_probs=11.4
Q ss_pred CCCCceEEEEeCCCcEEEee
Q 040934 1 MKKEDTVKLISAEGFEFVIS 20 (72)
Q Consensus 1 m~~~~~i~L~S~Dg~~f~v~ 20 (72)
||+ ....+.+.||+.+..+
T Consensus 1 ~sS-S~yVitt~DG~~IvT~ 19 (64)
T 2ra2_A 1 MSG-PNYVMHTNDGRSIVTD 19 (64)
T ss_dssp ----CCEEEEETTSCEEECS
T ss_pred CCC-CCEEEEeCCCcEEEcC
Confidence 553 3477788888887653
No 42
>2dhy_A CUE domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.02 E-value=22 Score=18.63 Aligned_cols=19 Identities=21% Similarity=0.303 Sum_probs=16.1
Q ss_pred cCCCCHHHHHHHHHHHHhh
Q 040934 50 FPEISTTILEKICQYFYWS 68 (72)
Q Consensus 50 l~~v~~~~L~kVieyc~~h 68 (72)
||+++..+++.|++=|..+
T Consensus 29 FP~lD~~vI~~vL~a~~G~ 47 (67)
T 2dhy_A 29 FPNMDYDIIECVLRANSGA 47 (67)
T ss_dssp CSSSCHHHHHHHHHHHTSC
T ss_pred CCCCCHHHHHHHHHHcCCC
Confidence 8999999999999877543
No 43
>1ng7_A Poliovirus 3A-N, genome polyprotein [core protein P3A]; helical hairpin, unfolded domain, symmetric dimer, viral protein; NMR {Human poliovirus 1} SCOP: a.178.1.1
Probab=35.69 E-value=19 Score=18.65 Aligned_cols=21 Identities=19% Similarity=0.264 Sum_probs=14.6
Q ss_pred cccCCCCHHHH-----HHHHHHHHhh
Q 040934 48 VTFPEISTTIL-----EKICQYFYWS 68 (72)
Q Consensus 48 Ipl~~v~~~~L-----~kVieyc~~h 68 (72)
-|.|..=.+.| +.|++||+.+
T Consensus 16 ~ppP~aI~DLLksvds~eV~~YC~~k 41 (60)
T 1ng7_A 16 SPPPECINDLLQAVDSQEVRDYCEKK 41 (60)
T ss_dssp CCSSTTTHHHHHHHCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHcCCCHHHHHHHHHC
Confidence 35555556666 6789999875
No 44
>1p3q_Q VPS9P, vacuolar protein sorting-associated protein VPS9; trafficking, post translational modification, mono- ubiquitination; 1.70A {Saccharomyces cerevisiae} SCOP: a.5.2.4 PDB: 1mn3_A
Probab=35.63 E-value=28 Score=17.53 Aligned_cols=19 Identities=21% Similarity=0.599 Sum_probs=14.5
Q ss_pred cCCCCHHHHHHHHHHHHhh
Q 040934 50 FPEISTTILEKICQYFYWS 68 (72)
Q Consensus 50 l~~v~~~~L~kVieyc~~h 68 (72)
||+++..+++-|++=...+
T Consensus 23 FP~lD~evI~~Vl~a~~G~ 41 (54)
T 1p3q_Q 23 FPDMDPSLIEDVCIAAASR 41 (54)
T ss_dssp STTSCHHHHHHHHHHSCC-
T ss_pred cccCCHHHHHHHHHHcCCC
Confidence 8899999999998754433
No 45
>2io0_B Small ubiquitin-related modifier 2 precursor; SUMO, SENP, ULP, complex, protein binding, hydrolase; 2.30A {Homo sapiens} SCOP: d.15.1.1
Probab=35.31 E-value=33 Score=18.56 Aligned_cols=20 Identities=15% Similarity=0.315 Sum_probs=12.8
Q ss_pred CCCCc-eEEEEeCCCcEEEee
Q 040934 1 MKKED-TVKLISAEGFEFVIS 20 (72)
Q Consensus 1 m~~~~-~i~L~S~Dg~~f~v~ 20 (72)
|++.. .|++++.||..+.+.
T Consensus 1 ~~~~~i~ikVk~~~g~~v~~~ 21 (91)
T 2io0_B 1 MANDHINLKVAGQDGSVVQFK 21 (91)
T ss_dssp ---CEEEEEEECTTSCEEEEE
T ss_pred CCCCeEEEEEECCCCCEEEEE
Confidence 55443 689999999876665
No 46
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus}
Probab=32.96 E-value=7.7 Score=25.61 Aligned_cols=16 Identities=13% Similarity=0.160 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHhhccC
Q 040934 56 TILEKICQYFYWSLQY 71 (72)
Q Consensus 56 ~~L~kVieyc~~h~~y 71 (72)
..|++++.|++||.++
T Consensus 331 ~~l~~~l~~~~~~~~~ 346 (347)
T 2waa_A 331 PQLRQIMDWLEHHHHH 346 (347)
T ss_dssp HHHHHHHTCCC-----
T ss_pred HHHHHhhhHHhhcccC
Confidence 3468888999998765
No 47
>4h10_A ARYL hydrocarbon receptor nuclear translocator-LI 1; BHLH, circadian transcription, transcription-DNA complex; 2.40A {Homo sapiens}
Probab=31.79 E-value=38 Score=17.85 Aligned_cols=18 Identities=17% Similarity=-0.079 Sum_probs=14.7
Q ss_pred CHHHHHHHHHHHHhhccC
Q 040934 54 STTILEKICQYFYWSLQY 71 (72)
Q Consensus 54 ~~~~L~kVieyc~~h~~y 71 (72)
-++||++.|+|+...+.+
T Consensus 47 KasIL~~tV~ylk~l~~~ 64 (73)
T 4h10_A 47 KLTVLRMAVQHMKTLRGA 64 (73)
T ss_dssp HHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 478999999999887653
No 48
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=30.90 E-value=27 Score=17.70 Aligned_cols=18 Identities=11% Similarity=0.325 Sum_probs=14.6
Q ss_pred cCCCCHHHHHHHHHHHHh
Q 040934 50 FPEISTTILEKICQYFYW 67 (72)
Q Consensus 50 l~~v~~~~L~kVieyc~~ 67 (72)
||+++..+++.|++=|..
T Consensus 20 FP~ld~~~I~~vL~a~~g 37 (59)
T 1wgl_A 20 FPNMDQEVIRSVLEAQRG 37 (59)
T ss_dssp CSSSCHHHHHHHHTTTTT
T ss_pred CCCCCHHHHHHHHHHcCC
Confidence 889999999999875543
No 49
>3d3c_J 30S ribosomal protein S10, N utilization substance protein B; NUSB, NUSE, phage lambda, lambda N antitermination antitermination; 2.60A {Escherichia coli} PDB: 2kvq_E 3d3b_J* 3imq_J
Probab=30.64 E-value=44 Score=18.19 Aligned_cols=37 Identities=16% Similarity=0.313 Sum_probs=18.5
Q ss_pred eEEEEeCCCcEEEeeHHHHHHhHHHHHHhcCCCCCCCCCCcccccC
Q 040934 6 TVKLISAEGFEFVISKEAAMVSQTIRNMLTSPGGFAETEHGEVTFP 51 (72)
Q Consensus 6 ~i~L~S~Dg~~f~v~~~~a~~S~~i~~~l~~~~~~~e~~~~~Ipl~ 51 (72)
.|+|.|-|-.. ++.. +.-|.+.....+. .-.+|||||
T Consensus 12 rI~L~S~d~~~--Ld~~----~~~Iv~~ak~~g~---~v~GPipLP 48 (87)
T 3d3c_J 12 RIRLKAFDHRL--IDQA----TAEIVETAKRTGA---QVRGPIPLP 48 (87)
T ss_dssp EEEEEESCHHH--HHHH----HHHHHHHHHHTTC---EEEEEEEEE
T ss_pred EEEEEECCHHH--HHHH----HHHHHHHHHHhCC---ccCCCCCCC
Confidence 58888887221 1222 3333333333232 135788888
No 50
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=29.90 E-value=49 Score=17.39 Aligned_cols=19 Identities=0% Similarity=-0.137 Sum_probs=16.2
Q ss_pred CCCCHHHHHHHHHHHHhhc
Q 040934 51 PEISTTILEKICQYFYWSL 69 (72)
Q Consensus 51 ~~v~~~~L~kVieyc~~h~ 69 (72)
.++++.+.+++..+|+.+.
T Consensus 35 ~D~~~~~~~~i~~lc~~~~ 53 (82)
T 3v7e_A 35 KDADPILTSSVVSLAEDQG 53 (82)
T ss_dssp TTSCHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHcC
Confidence 3788999999999998864
No 51
>3htu_A Vacuolar protein-sorting-associated protein 25; ESCRT-II, ESCRT-III, VPS20, VPS25, MVB, cytoplasm, nucleus, polymorphism, protein transport; 2.00A {Homo sapiens}
Probab=29.68 E-value=70 Score=17.19 Aligned_cols=24 Identities=13% Similarity=0.088 Sum_probs=20.1
Q ss_pred cccccCCCCHHHHHHHHHHHHhhc
Q 040934 46 GEVTFPEISTTILEKICQYFYWSL 69 (72)
Q Consensus 46 ~~Ipl~~v~~~~L~kVieyc~~h~ 69 (72)
..-.|.+++..+|.|.+..+.+..
T Consensus 40 ~~~ef~gmd~~~L~kaL~~L~k~g 63 (79)
T 3htu_A 40 EDEEFHGLDEATLLRALQALQQEH 63 (79)
T ss_dssp TTSTTTTCCHHHHHHHHHHHHHTT
T ss_pred CCCcccCCCHHHHHHHHHHHHHcC
Confidence 345789999999999999988764
No 52
>3qvn_A Manganese-containing superoxide dismutase; Mn superoxide dismutase, oxidoreductase; 2.60A {Candida albicans}
Probab=29.49 E-value=24 Score=22.30 Aligned_cols=19 Identities=26% Similarity=0.300 Sum_probs=15.8
Q ss_pred CCCCHHHHHHHHHHHHhhccC
Q 040934 51 PEISTTILEKICQYFYWSLQY 71 (72)
Q Consensus 51 ~~v~~~~L~kVieyc~~h~~y 71 (72)
|-|+..+|+ +.|-.||+.|
T Consensus 22 P~is~~tm~--~Hh~kHh~~Y 40 (206)
T 3qvn_A 22 PYISKEIND--LHINKHHVAY 40 (206)
T ss_dssp TTSCHHHHH--HHHHHHHHHH
T ss_pred ccCCHHHHH--HHHHHHHHHH
Confidence 359999999 8888888876
No 53
>3kky_A Mnsod, superoxide dismutase [MN]; manganese, ME binding, oxidoreductase, metal binding protein; 1.80A {Deinococcus radiodurans} PDB: 2cdy_A 2ce4_A 1y67_A 2aw9_A
Probab=29.34 E-value=22 Score=22.56 Aligned_cols=19 Identities=21% Similarity=0.308 Sum_probs=16.1
Q ss_pred CCCCHHHHHHHHHHHHhhccC
Q 040934 51 PEISTTILEKICQYFYWSLQY 71 (72)
Q Consensus 51 ~~v~~~~L~kVieyc~~h~~y 71 (72)
|-|++.+|+ +.|-.||+.|
T Consensus 17 P~is~~tm~--~Hh~kHh~~Y 35 (211)
T 3kky_A 17 PHIDARTME--IHHTKHHQTY 35 (211)
T ss_dssp TTSCHHHHH--HHHHTHHHHH
T ss_pred cccCHHHHH--HHHHHHHHHH
Confidence 459999999 8898898876
No 54
>4h10_B Circadian locomoter output cycles protein kaput; BHLH, circadian transcription, transcription-DNA complex; 2.40A {Homo sapiens}
Probab=27.98 E-value=35 Score=17.97 Aligned_cols=15 Identities=20% Similarity=0.350 Sum_probs=10.4
Q ss_pred CHHHHHHHHHHHHhh
Q 040934 54 STTILEKICQYFYWS 68 (72)
Q Consensus 54 ~~~~L~kVieyc~~h 68 (72)
-++||++.|+|+.+.
T Consensus 43 K~sIL~~aI~yik~L 57 (71)
T 4h10_B 43 KSTVLQKSIDFLRKH 57 (71)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 367887777776654
No 55
>1pl4_A Superoxide dismutase [MN], mitochondrial; oxidoreductase; 1.47A {Homo sapiens} SCOP: a.2.11.1 d.44.1.1 PDB: 1n0j_A 1luv_A 1msd_A 2adq_B 1pm9_A 3c3t_A 1ap6_A 1ap5_A 1var_A 3c3s_A 1em1_A 1qnm_A 1zte_A 1luw_A 2gds_A 1zuq_A 2adp_A* 1zsp_A 1n0n_A 2p4k_A ...
Probab=27.75 E-value=24 Score=22.12 Aligned_cols=19 Identities=21% Similarity=0.352 Sum_probs=15.9
Q ss_pred CCCCHHHHHHHHHHHHhhccC
Q 040934 51 PEISTTILEKICQYFYWSLQY 71 (72)
Q Consensus 51 ~~v~~~~L~kVieyc~~h~~y 71 (72)
|-|++.+|+ +.|-.||+.|
T Consensus 16 P~is~~tm~--~Hh~kHh~~Y 34 (198)
T 1pl4_A 16 PHINAQIMQ--LHHSKHHAAY 34 (198)
T ss_dssp TTSCHHHHH--HHHHTHHHHH
T ss_pred ccCCHHHHH--HHHHHHHHHH
Confidence 469999999 8888888876
No 56
>3rn4_A Superoxide dismutase [MN], mitochondrial; mitochondrial manganese superoxide dismutase, iron-binding, mitochondrion, oxidoreductase; 1.79A {Saccharomyces cerevisiae} PDB: 3bfr_A 3lsu_A* 4e4e_A*
Probab=27.71 E-value=24 Score=22.48 Aligned_cols=19 Identities=37% Similarity=0.405 Sum_probs=15.7
Q ss_pred CCCCHHHHHHHHHHHHhhccC
Q 040934 51 PEISTTILEKICQYFYWSLQY 71 (72)
Q Consensus 51 ~~v~~~~L~kVieyc~~h~~y 71 (72)
|-|++.||+ +.|-.||+.|
T Consensus 24 P~Is~~tm~--~Hh~kHH~~Y 42 (215)
T 3rn4_A 24 PYISGQINE--LHYTKHHQTY 42 (215)
T ss_dssp TTSCHHHHH--HHHHTHHHHH
T ss_pred CcCCHHHHH--HHHHHHHHHH
Confidence 459999999 8888888876
No 57
>3p8c_F ABL interactor 2; actin polymerization, protein binding; 2.29A {Homo sapiens}
Probab=27.18 E-value=27 Score=21.42 Aligned_cols=16 Identities=31% Similarity=0.343 Sum_probs=12.8
Q ss_pred CHHHHHHHHHHHHhhc
Q 040934 54 STTILEKICQYFYWSL 69 (72)
Q Consensus 54 ~~~~L~kVieyc~~h~ 69 (72)
+..-|..|.+||+..+
T Consensus 23 s~~nL~~vAdYCE~nY 38 (159)
T 3p8c_F 23 SYTNLERVADYCENNY 38 (159)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHH
Confidence 4567899999999754
No 58
>1ids_A Iron superoxide dismutase; 2.00A {Mycobacterium tuberculosis} SCOP: a.2.11.1 d.44.1.1 PDB: 1gn2_A 1gn3_A 1gn6_A 1gn4_A
Probab=27.17 E-value=25 Score=22.25 Aligned_cols=19 Identities=32% Similarity=0.280 Sum_probs=15.9
Q ss_pred CCCCHHHHHHHHHHHHhhccC
Q 040934 51 PEISTTILEKICQYFYWSLQY 71 (72)
Q Consensus 51 ~~v~~~~L~kVieyc~~h~~y 71 (72)
|-|++.+|+ +.|-.||+.|
T Consensus 18 P~is~~tm~--~Hh~kHh~~Y 36 (207)
T 1ids_A 18 PHISGQINE--LHHSKHHATY 36 (207)
T ss_dssp TTSCHHHHH--HHHHTHHHHH
T ss_pred cccCHHHHH--HHHHHHHHHH
Confidence 469999999 7888888876
No 59
>3dc5_A Superoxide dismutase [MN] 2; alpha hairpin N domain, alpha/beta C domain, oxidoreductase, manganese, metal-binding, mitochondrion; 1.70A {Caenorhabditis elegans} PDB: 3dc6_A
Probab=26.66 E-value=26 Score=21.98 Aligned_cols=19 Identities=26% Similarity=0.324 Sum_probs=15.6
Q ss_pred CCCCHHHHHHHHHHHHhhccC
Q 040934 51 PEISTTILEKICQYFYWSLQY 71 (72)
Q Consensus 51 ~~v~~~~L~kVieyc~~h~~y 71 (72)
|-|++.||+ +.|-.||+.|
T Consensus 17 P~is~~tm~--~Hh~kHh~~Y 35 (195)
T 3dc5_A 17 PVISHEIMQ--LHHQKHHATY 35 (195)
T ss_dssp TTSCHHHHH--HHHHTHHHHH
T ss_pred ccCCHHHHH--HHHHHHHHHH
Confidence 459999999 8888888766
No 60
>3d9j_A RNA-binding protein 16; SCAF8, RNA polymerase II CTD interacting domain, arm repeats phospho-CTD, phosphoprotein, transcription; 1.60A {Homo sapiens} PDB: 3d9k_A* 3d9l_A* 3d9m_A* 3d9n_A* 3d9p_A* 3d9i_A 3d9o_A* 2diw_A
Probab=26.40 E-value=59 Score=19.00 Aligned_cols=21 Identities=19% Similarity=0.365 Sum_probs=18.0
Q ss_pred CCCCHHHHHHHHHHHHhhccC
Q 040934 51 PEISTTILEKICQYFYWSLQY 71 (72)
Q Consensus 51 ~~v~~~~L~kVieyc~~h~~y 71 (72)
|++++.....+-.||.+|.+|
T Consensus 19 ~~~S~~~I~~LT~~a~~~~~~ 39 (145)
T 3d9j_A 19 PPISKAKMTQITKAAIKAIKF 39 (145)
T ss_dssp SSCCHHHHHHHHHHHHHTGGG
T ss_pred CCCcHHHHHHHHHHHHHHHHH
Confidence 359999999999999998765
No 61
>1ix9_A Mnsod, superoxide dismutase; manganese superoxide dismutase, Y174F mutant, hydrogen bond, reactivity, ultra-high resolution, oxidoreductase; 0.90A {Escherichia coli} SCOP: a.2.11.1 d.44.1.1 PDB: 1i0h_A 1ixb_A 1zlz_A 1d5n_A 1mmm_A 1vew_A 3k9s_A 3ot7_A 1en5_A 1en4_A 1i08_A 1en6_A
Probab=26.30 E-value=26 Score=22.05 Aligned_cols=19 Identities=16% Similarity=0.251 Sum_probs=15.8
Q ss_pred CCCCHHHHHHHHHHHHhhccC
Q 040934 51 PEISTTILEKICQYFYWSLQY 71 (72)
Q Consensus 51 ~~v~~~~L~kVieyc~~h~~y 71 (72)
|-|++.+|+ +.|-.||+.|
T Consensus 16 P~is~~tm~--~Hh~kHh~~Y 34 (205)
T 1ix9_A 16 PHFDKQTME--IHHTKHHQTY 34 (205)
T ss_dssp TTSCHHHHH--HHHHTHHHHH
T ss_pred cccCHHHHH--HHHHHHHHHH
Confidence 469999999 7888888766
No 62
>4i95_A Putative uncharacterized protein; lipocalin-like domain of PF13924 family, structural genomics center for structural genomics, JCSG; HET: MSE; 1.81A {Bacteroides eggerthii} PDB: 4gzv_A
Probab=26.20 E-value=35 Score=20.58 Aligned_cols=17 Identities=24% Similarity=0.364 Sum_probs=14.1
Q ss_pred CceEEEEeCCCcEEEee
Q 040934 4 EDTVKLISAEGFEFVIS 20 (72)
Q Consensus 4 ~~~i~L~S~Dg~~f~v~ 20 (72)
+..+|+.|.||.-+.+-
T Consensus 35 sn~lKIlSdDgtF~Ni~ 51 (142)
T 4i95_A 35 SNTFKVLSDDGRIVNFT 51 (142)
T ss_dssp EEEEEEECTTSEEEEEE
T ss_pred CccEEEEcCCCcEEEEE
Confidence 56799999999988764
No 63
>2uyz_B Small ubiquitin-related modifier 1; sumoylation, cell division, nuclear protein, ubiquitin-like modifier, UBL conjugation pathway; 1.4A {Homo sapiens} SCOP: d.15.1.1 PDB: 2vrr_B 2iy0_B 2iy1_B 2g4d_B 2las_A 2io2_B 1z5s_B 3uip_B* 1tgz_B* 2bf8_B
Probab=25.90 E-value=65 Score=16.06 Aligned_cols=17 Identities=18% Similarity=0.171 Sum_probs=13.4
Q ss_pred CceEEEEeCCCcEEEee
Q 040934 4 EDTVKLISAEGFEFVIS 20 (72)
Q Consensus 4 ~~~i~L~S~Dg~~f~v~ 20 (72)
...|++++.+|..+.++
T Consensus 3 ~m~i~vk~~~g~~~~~~ 19 (79)
T 2uyz_B 3 YIKLKVIGQDSSEIHFK 19 (79)
T ss_dssp EEEEEEECTTCCEEEEE
T ss_pred eEEEEEECCCCCEEEEE
Confidence 34689999999987665
No 64
>3tjt_A Superoxide dismutase; metal ION binding, rossmann fold, oxidoreductase; 1.80A {Clostridium difficile}
Probab=25.75 E-value=27 Score=22.00 Aligned_cols=19 Identities=16% Similarity=0.125 Sum_probs=15.3
Q ss_pred CCCCHHHHHHHHHHHHhhccC
Q 040934 51 PEISTTILEKICQYFYWSLQY 71 (72)
Q Consensus 51 ~~v~~~~L~kVieyc~~h~~y 71 (72)
|-|++.||+ +.|-.||+.|
T Consensus 20 P~Is~~tm~--~Hh~kHh~~Y 38 (208)
T 3tjt_A 20 PYIDKETMK--LHHDKHYQAY 38 (208)
T ss_dssp TTSCHHHHH--HHHHTHHHHH
T ss_pred cccCHHHHH--HHHHHHHHHH
Confidence 348999998 8888888776
No 65
>1d8j_A General transcription factor TFIIE-beta; winged helix-turn-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.5.18 PDB: 1d8k_A
Probab=25.66 E-value=51 Score=17.95 Aligned_cols=16 Identities=25% Similarity=0.295 Sum_probs=13.5
Q ss_pred CCCHHHHHHHHHHHHh
Q 040934 52 EISTTILEKICQYFYW 67 (72)
Q Consensus 52 ~v~~~~L~kVieyc~~ 67 (72)
+..-.+|.||++||..
T Consensus 7 ~~~f~~lakiV~~mK~ 22 (81)
T 1d8j_A 7 GYKFGVLAKIVNYMKT 22 (81)
T ss_dssp CTTHHHHHHHHHHHHH
T ss_pred ccceehHHHHHHHHHH
Confidence 4677899999999984
No 66
>1bsm_A Superoxide dismutase; oxidoreductase; 1.35A {Propionibacterium freudenreichii subspshermanii} SCOP: a.2.11.1 d.44.1.1 PDB: 1ar4_A 1ar5_A 1bs3_A 1avm_A 1bt8_A
Probab=25.56 E-value=28 Score=21.90 Aligned_cols=19 Identities=32% Similarity=0.277 Sum_probs=15.7
Q ss_pred CCCCHHHHHHHHHHHHhhccC
Q 040934 51 PEISTTILEKICQYFYWSLQY 71 (72)
Q Consensus 51 ~~v~~~~L~kVieyc~~h~~y 71 (72)
|-|++.+|+ +.|-.||+.|
T Consensus 17 p~is~~tm~--~Hh~kHh~~Y 35 (201)
T 1bsm_A 17 PYISGEIME--LHHDKHHKAY 35 (201)
T ss_dssp TTSCHHHHH--HHHHTHHHHH
T ss_pred ccCCHHHHH--HHHHHHHHHH
Confidence 459999999 7888888766
No 67
>1ma1_A Superoxide dismutase; metal specificity, azide inhibition, peroxide inactivation, oxidoreductase; 2.60A {Methanothermobacterthermautotrophicus} SCOP: a.2.11.1 d.44.1.1
Probab=25.53 E-value=28 Score=21.96 Aligned_cols=18 Identities=22% Similarity=0.123 Sum_probs=15.2
Q ss_pred CCCHHHHHHHHHHHHhhccC
Q 040934 52 EISTTILEKICQYFYWSLQY 71 (72)
Q Consensus 52 ~v~~~~L~kVieyc~~h~~y 71 (72)
-|++.+|+ +.|-.||+.|
T Consensus 24 ~is~~tm~--~Hh~kHh~~Y 41 (205)
T 1ma1_A 24 HISREQLT--IHHQKHHQAY 41 (205)
T ss_dssp TSCHHHHH--HHHHTHHHHH
T ss_pred cCCHHHHH--HHHHHHHHHH
Confidence 59999999 7888888766
No 68
>4ath_A MITF, microphthalmia-associated transcription factor; DNA binding protein, melanoma; HET: MSE; 1.95A {Mus musculus}
Probab=25.46 E-value=48 Score=18.11 Aligned_cols=16 Identities=25% Similarity=0.169 Sum_probs=13.5
Q ss_pred CCHHHHHHHHHHHHhh
Q 040934 53 ISTTILEKICQYFYWS 68 (72)
Q Consensus 53 v~~~~L~kVieyc~~h 68 (72)
--|.||++-++|..+-
T Consensus 29 nKg~IL~ksvdYI~~L 44 (83)
T 4ath_A 29 NKGTILKASVDYIRKL 44 (83)
T ss_dssp SHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHH
Confidence 4589999999998774
No 69
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=25.28 E-value=1.1e+02 Score=18.89 Aligned_cols=18 Identities=11% Similarity=0.137 Sum_probs=14.2
Q ss_pred CceEEEEeCCCcEEEeeH
Q 040934 4 EDTVKLISAEGFEFVISK 21 (72)
Q Consensus 4 ~~~i~L~S~Dg~~f~v~~ 21 (72)
+...+|..+||+.|.+..
T Consensus 29 ~~vyrv~l~DG~~~~vK~ 46 (288)
T 3f7w_A 29 WHLYRVELADGTPLFVKA 46 (288)
T ss_dssp EEEEEEEETTSCEEEEEE
T ss_pred eEEEEEEECCCCEEEEEE
Confidence 356889999999888753
No 70
>2rcv_A Superoxide dismutase [MN]; bacillus subtilis,superoxide dismutase, manganese, metal- binding, oxidoreductase, phosphorylation; 1.60A {Bacillus subtilis} PDB: 1xuq_A 1jr9_A
Probab=25.09 E-value=29 Score=21.82 Aligned_cols=19 Identities=16% Similarity=0.212 Sum_probs=15.7
Q ss_pred CCCCHHHHHHHHHHHHhhccC
Q 040934 51 PEISTTILEKICQYFYWSLQY 71 (72)
Q Consensus 51 ~~v~~~~L~kVieyc~~h~~y 71 (72)
|-|++.+|+ +.|-.||+.|
T Consensus 17 p~is~~tm~--~Hh~kHh~~Y 35 (202)
T 2rcv_A 17 PHIDKETMT--IHHTKHHNTY 35 (202)
T ss_dssp TTSCHHHHH--HHHHTHHHHH
T ss_pred cccCHHHHH--HHHHHHHHHH
Confidence 459999999 7888888766
No 71
>1mng_A Manganese superoxide dismutase; oxidoreductase(superoxide acceptor); 1.80A {Thermus thermophilus} SCOP: a.2.11.1 d.44.1.1 PDB: 3mds_A
Probab=24.64 E-value=30 Score=21.80 Aligned_cols=19 Identities=21% Similarity=0.254 Sum_probs=15.7
Q ss_pred CCCCHHHHHHHHHHHHhhccC
Q 040934 51 PEISTTILEKICQYFYWSLQY 71 (72)
Q Consensus 51 ~~v~~~~L~kVieyc~~h~~y 71 (72)
|-|++.+|+ +.|-.||+.|
T Consensus 18 p~is~~tm~--~Hh~kHh~~Y 36 (203)
T 1mng_A 18 PHIDAKTME--IHHQKHHGAY 36 (203)
T ss_dssp TTSCHHHHH--HHHHTHHHHH
T ss_pred cccCHHHHH--HHHHHHHHHH
Confidence 469999999 7888888766
No 72
>1kkc_A Mnsod, manganese superoxide dismutase; homotetramer, oxidoreductase; 2.00A {Aspergillus fumigatus} SCOP: a.2.11.1 d.44.1.1
Probab=24.63 E-value=29 Score=22.13 Aligned_cols=19 Identities=32% Similarity=0.331 Sum_probs=15.9
Q ss_pred CCCCHHHHHHHHHHHHhhccC
Q 040934 51 PEISTTILEKICQYFYWSLQY 71 (72)
Q Consensus 51 ~~v~~~~L~kVieyc~~h~~y 71 (72)
|-|++.+|+ +.|-.||+.|
T Consensus 30 P~iS~~tm~--~Hh~kHh~~Y 48 (221)
T 1kkc_A 30 PYISQQIME--LHHKKHHQTY 48 (221)
T ss_dssp TTSCHHHHH--HHHHTHHHHH
T ss_pred ccCCHHHHH--HHHHHHHHHH
Confidence 569999999 7888888876
No 73
>3ak2_A Superoxide dismutase [MN/FE]; cambialistic, oxidoreductase; 1.35A {Aeropyrum pernix} PDB: 3ak1_A 3ak3_A 1p7g_A 3evk_A
Probab=24.51 E-value=30 Score=22.00 Aligned_cols=19 Identities=21% Similarity=0.204 Sum_probs=15.6
Q ss_pred CCCCHHHHHHHHHHHHhhccC
Q 040934 51 PEISTTILEKICQYFYWSLQY 71 (72)
Q Consensus 51 ~~v~~~~L~kVieyc~~h~~y 71 (72)
|-|++.+|+ +.|-.||+.|
T Consensus 21 P~is~~tm~--~Hh~kHh~~Y 39 (214)
T 3ak2_A 21 PYIIEEIMK--LHHQKHHNTY 39 (214)
T ss_dssp TTSCHHHHH--HHHHTHHHHH
T ss_pred ccCCHHHHH--HHHHHHHHHH
Confidence 359999999 7888888776
No 74
>2nyb_A Superoxide dismutase [FE]; iron superoxide dismutase Q69E, fesod, oxidoreductase; 1.10A {Escherichia coli} SCOP: a.2.11.1 d.44.1.1 PDB: 2bkb_A 1isa_A 1isb_A 1isc_A 1za5_A 2w7w_A
Probab=24.46 E-value=30 Score=21.58 Aligned_cols=19 Identities=32% Similarity=0.473 Sum_probs=15.5
Q ss_pred CCCCHHHHHHHHHHHHhhccC
Q 040934 51 PEISTTILEKICQYFYWSLQY 71 (72)
Q Consensus 51 ~~v~~~~L~kVieyc~~h~~y 71 (72)
|-|++.+|+ +.|-.||+.|
T Consensus 16 p~is~~tm~--~Hh~kHh~~Y 34 (192)
T 2nyb_A 16 PHISAETIE--YHYGKHHQTY 34 (192)
T ss_dssp TTSCHHHHH--HHHHTHHHHH
T ss_pred ccCCHHHHH--HHHHHHHHHH
Confidence 359999999 8888888766
No 75
>3q9d_A Protein CPN_0803/CP_1068/CPJ0803/CPB0832; coiled-coil, needle TIP TYPEIII secretion system, unknown FU; 2.00A {Chlamydophila pneumoniae}
Probab=24.46 E-value=63 Score=19.95 Aligned_cols=28 Identities=25% Similarity=0.526 Sum_probs=23.4
Q ss_pred EEEeCCCcEEEeeHHHHHHhHHHHHHhc
Q 040934 8 KLISAEGFEFVISKEAAMVSQTIRNMLT 35 (72)
Q Consensus 8 ~L~S~Dg~~f~v~~~~a~~S~~i~~~l~ 35 (72)
+|---||++|.+-.++-..|-+||.++.
T Consensus 156 rlsrvdgqefllmtdvqntchlirhlla 183 (220)
T 3q9d_A 156 RLARVDGQEFLLMTDVQNTCHLIRHLLA 183 (220)
T ss_dssp EEEETTSCEEEEEEEHHHHHHHHHHHHH
T ss_pred hhhccCcceEEEeehhhhHHHHHHHHHH
Confidence 4556799999999999888999988765
No 76
>3kdf_A Replication protein A 14 kDa subunit; wheat GERM cell free, protein complex, center for eukaryotic structural genomics, PSI; HET: MSE; 1.98A {Homo sapiens} SCOP: b.40.4.3 PDB: 1quq_B 1l1o_A
Probab=24.39 E-value=80 Score=18.07 Aligned_cols=66 Identities=14% Similarity=0.115 Sum_probs=36.6
Q ss_pred CceEEEEeCCCcEEEeeHHHHHHhHHHHHHhcCCCCCCCC----CCcccccC-C---CCHHHHHHHHHHHHhhcc
Q 040934 4 EDTVKLISAEGFEFVISKEAAMVSQTIRNMLTSPGGFAET----EHGEVTFP-E---ISTTILEKICQYFYWSLQ 70 (72)
Q Consensus 4 ~~~i~L~S~Dg~~f~v~~~~a~~S~~i~~~l~~~~~~~e~----~~~~Ipl~-~---v~~~~L~kVieyc~~h~~ 70 (72)
.+.++|.|.||....|...--. ..-+..+++--|--..+ ....++|. + ++-....++++.+..++.
T Consensus 38 g~~~~l~s~Dg~~Vtv~l~~p~-~~~l~~~vEViG~V~~~~tI~~~~~~~fg~~~~~fD~~~yn~lv~l~~~~~~ 111 (121)
T 3kdf_A 38 GKMFILSDGEGKNGTIELMEPL-DEEISGIVEVVGRVTAKATILCTSYVQFKEDSHPFDLGLYNEAVKIIHDFPQ 111 (121)
T ss_dssp SSEEEEECTTSCEEEEECSSCC-SSCCCSEEEEEEEECTTSCEEEEEEEECCCSSSCCCHHHHHHHHHHHHHCGG
T ss_pred CCEEEEEeCCCCEEEEEeCCCC-CcccCcEEEEEEEECCCCeEEEEEEEecCCCCcccCHHHHHHHHHHHhcCCc
Confidence 5679999999999998742100 00000111110000000 01235555 4 999999999999887654
No 77
>1b06_A Protein (superoxide dismutase); oxidoreductase; 2.20A {Sulfolobus acidocaldarius} SCOP: a.2.11.1 d.44.1.1 PDB: 1wb8_A* 1wb7_A
Probab=24.29 E-value=30 Score=21.87 Aligned_cols=18 Identities=28% Similarity=0.348 Sum_probs=15.1
Q ss_pred CCCHHHHHHHHHHHHhhccC
Q 040934 52 EISTTILEKICQYFYWSLQY 71 (72)
Q Consensus 52 ~v~~~~L~kVieyc~~h~~y 71 (72)
-|++.+|+ +.|-.||+.|
T Consensus 24 ~is~~tm~--~Hh~kHh~~Y 41 (210)
T 1b06_A 24 YISKDIID--VHYNGHHKGY 41 (210)
T ss_dssp TSCHHHHH--HHHHTHHHHH
T ss_pred cCCHHHHH--HHHHHHHHHH
Confidence 59999999 7888888766
No 78
>3lio_A Iron superoxide dismutase; cold adaptation, flexibility, thermal stability, psychrophilic protein, metal-binding, oxidoreduc; HET: TRE; 1.50A {Pseudoalteromonas haloplanktis} PDB: 3lj9_A* 3ljf_A* 3sdp_A
Probab=24.07 E-value=20 Score=22.38 Aligned_cols=19 Identities=32% Similarity=0.280 Sum_probs=15.6
Q ss_pred CCCCHHHHHHHHHHHHhhccC
Q 040934 51 PEISTTILEKICQYFYWSLQY 71 (72)
Q Consensus 51 ~~v~~~~L~kVieyc~~h~~y 71 (72)
|-|++.+|+ +.|-.||+.|
T Consensus 16 P~is~~tm~--~Hh~kHh~~Y 34 (192)
T 3lio_A 16 PHISKETLE--FHHGKHHNTY 34 (192)
T ss_dssp TTSCHHHHH--HHTTTHHHHH
T ss_pred ccCCHHHHH--HHHHHHHHHH
Confidence 459999999 7888888765
No 79
>2awp_A Iron super-oxide dismutase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.00A {Plasmodium knowlesi} PDB: 2bpi_A 2a03_A 2goj_A
Probab=23.72 E-value=32 Score=21.58 Aligned_cols=19 Identities=32% Similarity=0.455 Sum_probs=15.7
Q ss_pred CCCCHHHHHHHHHHHHhhccC
Q 040934 51 PEISTTILEKICQYFYWSLQY 71 (72)
Q Consensus 51 ~~v~~~~L~kVieyc~~h~~y 71 (72)
|-|++.+|+ +.|-.||+.|
T Consensus 17 p~is~~tm~--~Hh~kHh~~Y 35 (198)
T 2awp_A 17 PHISEETLN--FHYNKHHAGY 35 (198)
T ss_dssp TTSCHHHHH--HHHHTHHHHH
T ss_pred ccCCHHHHH--HHHHHHHHHH
Confidence 459999999 8888888766
No 80
>1dt0_A Superoxide dismutase; pseudomonas ovalis, oxidoreductase; 2.10A {Pseudomonas putida} SCOP: a.2.11.1 d.44.1.1
Probab=23.63 E-value=32 Score=21.57 Aligned_cols=19 Identities=32% Similarity=0.293 Sum_probs=15.6
Q ss_pred CCCCHHHHHHHHHHHHhhccC
Q 040934 51 PEISTTILEKICQYFYWSLQY 71 (72)
Q Consensus 51 ~~v~~~~L~kVieyc~~h~~y 71 (72)
|-|++.+|+ +.|-.||+.|
T Consensus 16 p~is~~tm~--~Hh~kHh~~Y 34 (197)
T 1dt0_A 16 PHISKETLE--FHHDKHHNTY 34 (197)
T ss_dssp TTSCHHHHH--HHHHTHHHHH
T ss_pred ccCCHHHHH--HHHHHHHHHH
Confidence 359999999 8888888766
No 81
>2blf_B SORB, sulfite\:cytochrome C oxidoreductase subunit B; sulfite oxidase, molybdopterin, C-type cytochrome, heme, electron transport; HET: MSS HEC; 1.8A {Starkeya novella} PDB: 2bpb_B* 2c9x_B* 2ca3_B* 2ca4_B*
Probab=23.44 E-value=86 Score=16.12 Aligned_cols=18 Identities=11% Similarity=0.195 Sum_probs=14.8
Q ss_pred CCCHHHHHHHHHHHHhhc
Q 040934 52 EISTTILEKICQYFYWSL 69 (72)
Q Consensus 52 ~v~~~~L~kVieyc~~h~ 69 (72)
.++.+-.+.|++|+..|+
T Consensus 64 ~ls~~e~~~I~~YL~~~y 81 (81)
T 2blf_B 64 PVDEADAKAIADYLAKTY 81 (81)
T ss_dssp CCCHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHhC
Confidence 478889999999998763
No 82
>2rb6_A Uncharacterized protein; NESG, Q8EI81_sheon, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.50A {Shewanella oneidensis} SCOP: b.38.1.6
Probab=22.98 E-value=76 Score=16.29 Aligned_cols=15 Identities=7% Similarity=0.060 Sum_probs=10.3
Q ss_pred eEEEEeCCCcEEEee
Q 040934 6 TVKLISAEGFEFVIS 20 (72)
Q Consensus 6 ~i~L~S~Dg~~f~v~ 20 (72)
...+.+.||+.+..+
T Consensus 4 ~yvitT~DG~~IvT~ 18 (61)
T 2rb6_A 4 QYIMSTKDGKMITSD 18 (61)
T ss_dssp EEEEEETTSCEEEES
T ss_pred cEEEEeCCCcEEEcC
Confidence 366778888877653
No 83
>2pi2_E Replication protein A 14 kDa subunit; FULL-length RPA14/32, ssDNA binding protein, OB-fold, dioxan replication, DNA binding protein; 2.00A {Homo sapiens} SCOP: b.40.4.3 PDB: 2pqa_B 2z6k_C
Probab=22.27 E-value=84 Score=18.59 Aligned_cols=66 Identities=14% Similarity=0.110 Sum_probs=36.5
Q ss_pred CceEEEEeCCCcEEEeeHHHHHHhHHHHHHhcCCCCCCCC----CCcccccC-C---CCHHHHHHHHHHHHhhcc
Q 040934 4 EDTVKLISAEGFEFVISKEAAMVSQTIRNMLTSPGGFAET----EHGEVTFP-E---ISTTILEKICQYFYWSLQ 70 (72)
Q Consensus 4 ~~~i~L~S~Dg~~f~v~~~~a~~S~~i~~~l~~~~~~~e~----~~~~Ipl~-~---v~~~~L~kVieyc~~h~~ 70 (72)
...++|.|.||....|...-- ...-+..+++--|.-..+ ....++|. + ++-.+..++|+.+...++
T Consensus 59 G~~~~l~s~Dg~~VtV~l~~p-L~~~~~~~VEViG~V~~~~tI~~~~~~~fGd~~~~fD~~~yn~lv~l~~~f~~ 132 (142)
T 2pi2_E 59 GKMFILSDGEGKNGTIELMEP-LDEEISGIVEVVGRVTAKATILCTSYVQFKEDSHPFDLGLYNEAVKIIHDFPQ 132 (142)
T ss_dssp SSEEEEECTTSCEEEEECSSC-CSSCCCSEEEEEEEECTTSCEEEEEEEECCCSSSCCCHHHHHHHHHHHHHCGG
T ss_pred CCEEEEEeCCCcEEEEEeCCC-CCccCCCEEEEEEEECCCCcEEEEEEEecCCCccccCHHHHHHHHHHHHhCcc
Confidence 568899999999999973210 000011111111100000 12245565 3 999999999999875443
No 84
>4f2n_A Superoxide dismutase; ssgcid, NIH, niaid, SBRI, emerald biostructures, structural national institute of allergy and infectious diseases; 1.85A {Leishmania major}
Probab=22.12 E-value=32 Score=22.18 Aligned_cols=19 Identities=32% Similarity=0.406 Sum_probs=15.6
Q ss_pred CCCCHHHHHHHHHHHHhhccC
Q 040934 51 PEISTTILEKICQYFYWSLQY 71 (72)
Q Consensus 51 ~~v~~~~L~kVieyc~~h~~y 71 (72)
|-|++.+|+ +.|-.||+.|
T Consensus 48 P~iS~~tm~--~Hh~kHh~~Y 66 (230)
T 4f2n_A 48 PVMSPRQLE--LHYSKHHSAY 66 (230)
T ss_dssp TTBCHHHHH--HHHHTHHHHH
T ss_pred ccCCHHHHH--HHHHHHHHHH
Confidence 348999999 8888888866
No 85
>2cw3_A Pmsod2, iron superoxide dismutase; oxidoreductase; 2.50A {Perkinsus marinus}
Probab=21.92 E-value=35 Score=22.69 Aligned_cols=18 Identities=22% Similarity=0.309 Sum_probs=14.8
Q ss_pred CCCHHHHHHHHHHHHhhccC
Q 040934 52 EISTTILEKICQYFYWSLQY 71 (72)
Q Consensus 52 ~v~~~~L~kVieyc~~h~~y 71 (72)
-|++.+|+ +.|-.||+.|
T Consensus 94 ~IS~etme--~Hh~KHHq~Y 111 (280)
T 2cw3_A 94 VISAATVD--FHYNKHHQGY 111 (280)
T ss_dssp TSCHHHHH--HHHHTHHHHH
T ss_pred cCCHHHHH--HHHHHHHHHH
Confidence 58889988 7888888776
No 86
>4ffk_A Superoxide dismutase; oxidoreductase, superoxide acceptor; 1.76A {Acidilobus saccharovorans}
Probab=21.71 E-value=36 Score=21.80 Aligned_cols=19 Identities=32% Similarity=0.301 Sum_probs=15.3
Q ss_pred CCCCHHHHHHHHHHHHhhccC
Q 040934 51 PEISTTILEKICQYFYWSLQY 71 (72)
Q Consensus 51 ~~v~~~~L~kVieyc~~h~~y 71 (72)
|-|++.+|+ +.|-.||+.|
T Consensus 33 P~Is~~tm~--~Hh~KHH~~Y 51 (223)
T 4ffk_A 33 PIISAETLR--YHHDKHHLGY 51 (223)
T ss_dssp TTSCHHHHH--HHHHTHHHHH
T ss_pred CcCCHHHHH--HHHHHHHHHH
Confidence 358999998 7888888766
No 87
>2cw2_A Superoxide dismutase 1; SOD, oxidoreductase; 1.86A {Perkinsus marinus}
Probab=21.60 E-value=37 Score=21.81 Aligned_cols=19 Identities=21% Similarity=0.240 Sum_probs=15.5
Q ss_pred CCCCHHHHHHHHHHHHhhccC
Q 040934 51 PEISTTILEKICQYFYWSLQY 71 (72)
Q Consensus 51 ~~v~~~~L~kVieyc~~h~~y 71 (72)
|-|++.+|+ +.|-.||+.|
T Consensus 47 P~iS~~tm~--~Hh~kHh~~Y 65 (226)
T 2cw2_A 47 PHMSAETLT--YHHDKHHQTY 65 (226)
T ss_dssp TTSCHHHHH--HHHHTHHHHH
T ss_pred cccCHHHHH--HHHHHHHHHH
Confidence 459999998 8888888766
No 88
>2k0q_A Putative uncharacterized protein COPK; copper, heavy metal resistance, open barrel, plasmid- encoded, metal binding protein; NMR {Cupriavidus metallidurans} PDB: 2km0_A 2lel_A 3dso_A 3dsp_A 3n7d_A 3n7e_A
Probab=21.37 E-value=13 Score=20.03 Aligned_cols=25 Identities=12% Similarity=0.359 Sum_probs=19.1
Q ss_pred EEEeCCCcEEEee-HHHHHHhHHHHH
Q 040934 8 KLISAEGFEFVIS-KEAAMVSQTIRN 32 (72)
Q Consensus 8 ~L~S~Dg~~f~v~-~~~a~~S~~i~~ 32 (72)
...+.||+...+. .++|+.+..|+.
T Consensus 43 ~meT~DG~~I~m~~dEVaRL~s~lr~ 68 (74)
T 2k0q_A 43 VMETRDGTKIIMKGNEIFRLDEALRK 68 (74)
T ss_dssp EEEBTTSCEEEEETTEEEETTHHHHT
T ss_pred EEEecCCCEEEecchhhhhHHHHHHh
Confidence 5789999999886 566777777764
No 89
>1jw2_A Hemolysin expression modulating protein HHA; structural genomics, protein structure initiative, OCSP, NESG, PSI; NMR {Escherichia coli} SCOP: a.23.5.1 PDB: 2jvp_A 2k5s_A
Probab=21.14 E-value=76 Score=16.91 Aligned_cols=15 Identities=13% Similarity=0.253 Sum_probs=11.7
Q ss_pred CHHHHHHHHHHHHhh
Q 040934 54 STTILEKICQYFYWS 68 (72)
Q Consensus 54 ~~~~L~kVieyc~~h 68 (72)
+.++|+||++-..|.
T Consensus 20 s~eTLEkv~e~~~y~ 34 (72)
T 1jw2_A 20 TIDTLERVIEKNKYE 34 (72)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhhcc
Confidence 568999999876654
No 90
>3h1s_A Superoxide dismutase; SOBD, csgid, oxidoreductase, structura genomics; 1.90A {Francisella tularensis subsp}
Probab=20.44 E-value=27 Score=21.89 Aligned_cols=19 Identities=26% Similarity=0.329 Sum_probs=15.0
Q ss_pred CCCCHHHHHHHHHHHHhhccC
Q 040934 51 PEISTTILEKICQYFYWSLQY 71 (72)
Q Consensus 51 ~~v~~~~L~kVieyc~~h~~y 71 (72)
|-|++.+|+ +.|-.||+.|
T Consensus 20 P~is~~tm~--~Hh~kHh~~Y 38 (195)
T 3h1s_A 20 STISKETIE--YHYGKHHQTY 38 (195)
T ss_dssp TTSCHHHHH--HHTTTHHHHH
T ss_pred cccCHHHHH--HHHHHHHHHH
Confidence 459999999 6887787765
Done!