Your job contains 1 sequence.
>040937
MANHLYGYSSSYGAGGGGGTPKSSAALSGVYTSRSLADAYHLSESTLRYDPDHSIYDSFR
YSGYLSSQAQQPWPPGVDPTDHLKRPSEALYHPTLLGTHTSIGQSEAWYSTNSLAKRPRI
ESASNLPVYPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSES
LPERPGEPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCAFY
LKNGTCKFGATCKFDHPKDFQLPSVGQENGIGEQNESVIKTDETTGLLNPGMSLFSHAPA
MLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAAS
LGISVVSPAASLYQTIDPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHH
PIDRSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHPPPGEVMAIS
ALDGTSTAVGEEVKGDEKESEVAPSTAV
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040937
(508 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2087775 - symbol:HUA1 "ENHANCER OF AG-4 1" spe... 1472 7.6e-151 1
TAIR|locus:2075477 - symbol:ZFN1 "zinc finger protein 1" ... 332 1.1e-54 2
TAIR|locus:2171407 - symbol:ZFN3 "zinc finger nuclease 3"... 329 2.9e-54 2
TAIR|locus:2043368 - symbol:AT2G47850 species:3702 "Arabi... 312 1.2e-50 2
TAIR|locus:2081066 - symbol:AT3G06410 species:3702 "Arabi... 502 4.7e-48 1
TAIR|locus:2182988 - symbol:AT5G18550 species:3702 "Arabi... 499 9.8e-48 1
TAIR|locus:2101170 - symbol:AT3G48440 species:3702 "Arabi... 318 6.2e-42 2
TAIR|locus:2010562 - symbol:AT1G04990 species:3702 "Arabi... 397 6.3e-37 1
TAIR|locus:1006230718 - symbol:AT1G48195 species:3702 "Ar... 215 7.4e-17 1
TAIR|locus:2013763 - symbol:AT1G29570 species:3702 "Arabi... 131 1.3e-05 1
FB|FBgn0030578 - symbol:CG5347 species:7227 "Drosophila m... 113 1.4e-05 2
ZFIN|ZDB-GENE-020213-2 - symbol:mkrn2 "makorin, ring fing... 111 2.0e-05 3
UNIPROTKB|C9IZP5 - symbol:MKRN1 "E3 ubiquitin-protein lig... 75 2.3e-05 2
UNIPROTKB|F1SRP7 - symbol:MKRN1 "Uncharacterized protein"... 100 3.0e-05 3
UNIPROTKB|F1NI93 - symbol:MKRN2 "Uncharacterized protein"... 92 4.1e-05 3
UNIPROTKB|Q9H000 - symbol:MKRN2 "Probable E3 ubiquitin-pr... 70 7.0e-05 4
UNIPROTKB|F1LVT2 - symbol:F1LVT2 "Uncharacterized protein... 123 0.00022 1
UNIPROTKB|F1MF12 - symbol:MKRN1 "Uncharacterized protein"... 92 0.00034 3
ZFIN|ZDB-GENE-990806-20 - symbol:cth1 "cth1" species:7955... 116 0.00061 1
UNIPROTKB|F1MRH0 - symbol:MKRN1 "Uncharacterized protein"... 92 0.00065 3
MGI|MGI:1914277 - symbol:Mkrn2 "makorin, ring finger prot... 91 0.00080 2
RGD|1310618 - symbol:Mkrn2 "makorin, ring finger protein,... 91 0.00081 2
UNIPROTKB|F1M3I4 - symbol:Mkrn2 "Protein Mkrn2" species:1... 91 0.00081 2
UNIPROTKB|P26651 - symbol:ZFP36 "Tristetraprolin" species... 115 0.00083 1
UNIPROTKB|H7C4T5 - symbol:MBNL1 "Muscleblind-like protein... 90 0.00084 2
ZFIN|ZDB-GENE-020213-1 - symbol:mkrn1 "makorin, ring fing... 65 0.00090 4
UNIPROTKB|C9JP00 - symbol:MBNL1 "Muscleblind-like protein... 90 0.0010 2
>TAIR|locus:2087775 [details] [associations]
symbol:HUA1 "ENHANCER OF AG-4 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001709 "cell fate
determination" evidence=TAS] [GO:0003723 "RNA binding"
evidence=ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0016607
GO:GO:0008270 GO:GO:0006397 GO:GO:0003723 GO:GO:0009908
EMBL:AB024033 GO:GO:0001709 EMBL:AY024357 EMBL:AC069474
EMBL:AK229145 IPI:IPI00536814 RefSeq:NP_187874.2 UniGene:At.5670
ProteinModelPortal:Q941Q3 SMR:Q941Q3 STRING:Q941Q3 PaxDb:Q941Q3
PRIDE:Q941Q3 EnsemblPlants:AT3G12680.1 GeneID:820448
KEGG:ath:AT3G12680 TAIR:At3g12680 eggNOG:NOG250655
HOGENOM:HOG000078745 InParanoid:Q941Q3 OMA:LGAHNTI PhylomeDB:Q941Q3
ProtClustDB:CLSN2690537 Genevestigator:Q941Q3 Uniprot:Q941Q3
Length = 524
Score = 1472 (523.2 bits), Expect = 7.6e-151, P = 7.6e-151
Identities = 268/416 (64%), Positives = 319/416 (76%)
Query: 66 SSQAQQPWPPGVDPTDHLKRPSEALYHPTLLGTHTSIGQSEAWYSTNSLAKRPRIESASN 125
++ A +P PPGV KR SEALY+PTLLG H +IGQ+EAWY+T+ KRP++ES S+
Sbjct: 114 AASAVEPLPPGV------KRTSEALYYPTLLGAHNTIGQTEAWYTTDYFTKRPKLESTSH 167
Query: 126 LPVYPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERP 185
LP+YPQR GEKDC +YMQTRTCKFG++C+FDHPIWVPEGGIPDWKE PV+ + E PERP
Sbjct: 168 LPIYPQRAGEKDCTHYMQTRTCKFGESCRFDHPIWVPEGGIPDWKEAPVVPNEE-YPERP 226
Query: 186 GEPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCAFYLKNGT 245
GEPDCPY++KTQRCK+GSKCKFNHP+++ S ++ + +LPERPSEP C FY+K G
Sbjct: 227 GEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQD----SLPERPSEPMCTFYMKTGK 282
Query: 246 CKFGATCKFDHPKDFQLPSVGQENGIGEQNESVIKTDETTGLLNPGMSLFSHAPAMLHNS 305
CKFG +CKF HPKD QLPS Q+ G SV T E NP ++ PA+ HNS
Sbjct: 283 CKFGLSCKFHHPKDIQLPSSSQDIG-----SSVGLTSEPDATNNPHVTF---TPALYHNS 334
Query: 306 KGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAASLGISV 365
KGLP+R GE+DCPFYLKTGSCKYG+TCRYNHPERTA P AA + + L++S A+L + +
Sbjct: 335 KGLPVRSGEVDCPFYLKTGSCKYGATCRYNHPERTAFIPQAAGVNYSLVSSNTANLNLGL 394
Query: 366 VSPAASLYQTIDPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRS 425
V+PA S YQT L Q TLGV + YPQRPGQ ECDYYMKTG CKFGE+CKFHHP DR
Sbjct: 395 VTPATSFYQT----LTQPTLGVISATYPQRPGQSECDYYMKTGECKFGERCKFHHPADRL 450
Query: 426 AAKT---PSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHPPPGEVMA 478
+A T P Q VKL+LAG PRREGA++CPYYMKTGTCKYGATCKFDHPPPGEVMA
Sbjct: 451 SAMTKQAPQQPNVKLSLAGYPRREGALNCPYYMKTGTCKYGATCKFDHPPPGEVMA 506
Score = 229 (85.7 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 42/101 (41%), Positives = 61/101 (60%)
Query: 392 YPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHC 451
YP+RPG+ +C YY+KT CK+G KCKF+HP + +A +Q++ LP R C
Sbjct: 222 YPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQDS-------LPERPSEPMC 274
Query: 452 PYYMKTGTCKYGATCKFDHPPPGEVMAISALDGTSTAVGEE 492
+YMKTG CK+G +CKF HP ++ + S G+S + E
Sbjct: 275 TFYMKTGKCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSE 315
Score = 226 (84.6 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 46/112 (41%), Positives = 64/112 (57%)
Query: 373 YQTIDPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPS- 431
Y T P+L ++T + P +YPQR G+ +C +YM+T CKFGE C+F HPI P
Sbjct: 155 YFTKRPKL-ESTSHL-P-IYPQRAGEKDCTHYMQTRTCKFGESCRFDHPIWVPEGGIPDW 211
Query: 432 QETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHPPPGEVMAISALD 483
+E + P R G CPYY+KT CKYG+ CKF+HP +++ D
Sbjct: 212 KEAPVVPNEEYPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQD 263
Score = 218 (81.8 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 40/99 (40%), Positives = 55/99 (55%)
Query: 129 YPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVP-VIASSESLPERPGE 187
YPQRPG+ +C YYM+T CKFG+ CKF HP + P V S P R G
Sbjct: 417 YPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGA 476
Query: 188 PDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVS 226
+CPY++KT CK+G+ CKF+HP + + + D +
Sbjct: 477 LNCPYYMKTGTCKYGATCKFDHPPPGEVMAKTTSEADAA 515
>TAIR|locus:2075477 [details] [associations]
symbol:ZFN1 "zinc finger protein 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0004518 "nuclease activity" evidence=TAS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0010313 "phytochrome
binding" evidence=IPI] [GO:0017148 "negative regulation of
translation" evidence=IMP] [GO:0048027 "mRNA 5'-UTR binding"
evidence=IPI] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005829 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0017148 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0048027 GO:GO:0004518 HOGENOM:HOG000237733
EMBL:AF138743 EMBL:AC018363 EMBL:AK117978 EMBL:BT025966
IPI:IPI00539955 PIR:T48874 RefSeq:NP_566183.1 UniGene:At.23706
ProteinModelPortal:Q8GXX7 SMR:Q8GXX7 STRING:Q8GXX7 PaxDb:Q8GXX7
PRIDE:Q8GXX7 EnsemblPlants:AT3G02830.1 GeneID:821230
KEGG:ath:AT3G02830 GeneFarm:4898 TAIR:At3g02830 eggNOG:NOG329662
InParanoid:Q8GXX7 OMA:SSDDQQR PhylomeDB:Q8GXX7
ProtClustDB:CLSN2917075 Genevestigator:Q8GXX7 GermOnline:AT3G02830
Uniprot:Q8GXX7
Length = 397
Score = 332 (121.9 bits), Expect = 1.1e-54, Sum P(2) = 1.1e-54
Identities = 65/148 (43%), Positives = 97/148 (65%)
Query: 129 YPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSE---SLPERP 185
YP+RPGE DC+YY++T C+FG TC+F+HP D +E+ VIA++ PER
Sbjct: 37 YPERPGEPDCSYYIRTGLCRFGSTCRFNHP--------RD-REL-VIATARMRGEYPERI 86
Query: 186 GEPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCAFYLKNGT 245
G+P+C Y+LKT CKFG CKF+HP++K G + + ++ P R +E CA++L+ G
Sbjct: 87 GQPECEYYLKTGTCKFGVTCKFHHPRNKA-GIAGRVSLNMLGYPLRSNEVDCAYFLRTGH 145
Query: 246 CKFGATCKFDHPK----DFQLPSVGQEN 269
CKFG TCKF+HP+ + +P+ GQ++
Sbjct: 146 CKFGGTCKFNHPQPQPTNMMVPTSGQQS 173
Score = 306 (112.8 bits), Expect = 6.6e-27, P = 6.6e-27
Identities = 76/233 (32%), Positives = 109/233 (46%)
Query: 129 YPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPGEP 188
YP+R G+ +C YY++T TCKFG TCKF HP + GI + ++ P R E
Sbjct: 82 YPERIGQPECEYYLKTGTCKFGVTCKFHHPR--NKAGIAGRVSLNMLG----YPLRSNEV 135
Query: 189 DCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPS-------EPPCAF-- 239
DC YFL+T CKFG CKFNHP+ + +G S R S + P ++
Sbjct: 136 DCAYFLRTGHCKFGGTCKFNHPQPQPTNMMVPTSGQQSYPWSRASFIASPRWQDPSSYAS 195
Query: 240 -YLKNGTCKFGATCKFDHPKDFQLPS-VGQENGIG--EQNESVIKTDETTGLL---NPGM 292
+ G + PS G + +QNE++ ++ G NPG
Sbjct: 196 LIMPQGVVPVQGWNPYSGQLGSVSPSGTGNDQNYRNLQQNETIESGSQSQGSFSGYNPGS 255
Query: 293 SLFSHAPAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPP 345
S+ L P RPG+ +C FY+KTG CK+G+ C+++HP PP
Sbjct: 256 SVPLGGYYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPP 308
Score = 260 (96.6 bits), Expect = 8.2e-43, Sum P(2) = 8.2e-43
Identities = 44/81 (54%), Positives = 59/81 (72%)
Query: 180 SLPERPGEPDCPYFLKTQRCKFGSKCKFNHPKDK-LIGSSDSGNGDVSALPERPSEPPCA 238
S PERPGEPDC Y+++T C+FGS C+FNHP+D+ L+ ++ G+ PER +P C
Sbjct: 36 SYPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATARMRGEY---PERIGQPECE 92
Query: 239 FYLKNGTCKFGATCKFDHPKD 259
+YLK GTCKFG TCKF HP++
Sbjct: 93 YYLKTGTCKFGVTCKFHHPRN 113
Score = 252 (93.8 bits), Expect = 1.1e-54, Sum P(2) = 1.1e-54
Identities = 49/105 (46%), Positives = 65/105 (61%)
Query: 390 SLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAV 449
+++P+RPGQ EC +YMKTG CKFG CKFHHP DR A P + + L+ GLP R G
Sbjct: 269 NVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQA---PPPDCL-LSSIGLPLRPGEP 324
Query: 450 HCPYYMKTGTCKYGATCKFDHPPPGEVMAISALDGTSTAVGEEVK 494
C +Y + G CK+G +CKFDHP M + D T++ E V+
Sbjct: 325 LCVFYTRYGICKFGPSCKFDHP-----MRVFTYDNTASETDEVVE 364
Score = 252 (93.8 bits), Expect = 3.7e-19, P = 3.7e-19
Identities = 44/82 (53%), Positives = 55/82 (67%)
Query: 392 YPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHC 451
YP+R GQ EC+YY+KTG CKFG CKFHHP R+ A + V L + G P R V C
Sbjct: 82 YPERIGQPECEYYLKTGTCKFGVTCKFHHP--RNKAGIAGR--VSLNMLGYPLRSNEVDC 137
Query: 452 PYYMKTGTCKYGATCKFDHPPP 473
Y+++TG CK+G TCKF+HP P
Sbjct: 138 AYFLRTGHCKFGGTCKFNHPQP 159
Score = 241 (89.9 bits), Expect = 1.5e-40, Sum P(2) = 1.5e-40
Identities = 50/139 (35%), Positives = 78/139 (56%)
Query: 217 SSDSGNGDVSALPERPSEPPCAFYLKNGTCKFGATCKFDHPKDFQLPSVGQENGIGEQNE 276
SSD + + PERP EP C++Y++ G C+FG+TC+F+HP+D +L + GE E
Sbjct: 27 SSDE-TMETGSYPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELV-IATARMRGEYPE 84
Query: 277 SVIKTD-E---TTGLLNPGMSLFSHAPA--------MLHNSKGLPIRPGELDCPFYLKTG 324
+ + + E TG G++ H P + N G P+R E+DC ++L+TG
Sbjct: 85 RIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSNEVDCAYFLRTG 144
Query: 325 SCKYGSTCRYNHPERTAIN 343
CK+G TC++NHP+ N
Sbjct: 145 HCKFGGTCKFNHPQPQPTN 163
Score = 241 (89.9 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
Identities = 40/76 (52%), Positives = 52/76 (68%)
Query: 182 PERPGEPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCAFYL 241
PERPG+P+C +++KT CKFG+ CKF+HP+D+ D + LP RP EP C FY
Sbjct: 272 PERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPPDCLLSSIG-LPLRPGEPLCVFYT 330
Query: 242 KNGTCKFGATCKFDHP 257
+ G CKFG +CKFDHP
Sbjct: 331 RYGICKFGPSCKFDHP 346
Score = 233 (87.1 bits), Expect = 6.5e-17, P = 6.5e-17
Identities = 39/80 (48%), Positives = 52/80 (65%)
Query: 392 YPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHC 451
YP+RPG+ +C YY++TG+C+FG C+F+HP DR T ++ P R G C
Sbjct: 37 YPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIA----TARMR-GEYPERIGQPEC 91
Query: 452 PYYMKTGTCKYGATCKFDHP 471
YY+KTGTCK+G TCKF HP
Sbjct: 92 EYYLKTGTCKFGVTCKFHHP 111
Score = 205 (77.2 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 39/83 (46%), Positives = 51/83 (61%)
Query: 128 VYPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPGE 187
V+P+RPG+ +C +YM+T CKFG CKF HP + PD + SS LP RPGE
Sbjct: 270 VFPERPGQPECQFYMKTGDCKFGTVCKFHHPR-DRQAPPPD-----CLLSSIGLPLRPGE 323
Query: 188 PDCPYFLKTQRCKFGSKCKFNHP 210
P C ++ + CKFG CKF+HP
Sbjct: 324 PLCVFYTRYGICKFGPSCKFDHP 346
Score = 125 (49.1 bits), Expect = 2.6e-41, Sum P(2) = 2.6e-41
Identities = 27/68 (39%), Positives = 39/68 (57%)
Query: 299 PAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLI-TSP 357
P L +S GLP+RPGE C FY + G CK+G +C+++HP R A+ ++ TS
Sbjct: 308 PDCLLSSIGLPLRPGEPLCVFYTRYGICKFGPSCKFDHPMRVFTYDNTASETDEVVETST 367
Query: 358 AASLGISV 365
S +SV
Sbjct: 368 GKSRRLSV 375
Score = 123 (48.4 bits), Expect = 3.4e-28, Sum P(2) = 3.4e-28
Identities = 27/61 (44%), Positives = 33/61 (54%)
Query: 125 NLPVYPQRPGEKDCAYYMQTRTCKFGDTCKFDHP------IWVPEGGIPD--WKEVPVIA 176
N+ YP R E DCAY+++T CKFG TCKF+HP + VP G W IA
Sbjct: 124 NMLGYPLRSNEVDCAYFLRTGHCKFGGTCKFNHPQPQPTNMMVPTSGQQSYPWSRASFIA 183
Query: 177 S 177
S
Sbjct: 184 S 184
>TAIR|locus:2171407 [details] [associations]
symbol:ZFN3 "zinc finger nuclease 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0004518 "nuclease activity" evidence=TAS]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 EMBL:AB005242 GO:GO:0004518
HOGENOM:HOG000237733 EMBL:AF138872 EMBL:AY084634 EMBL:AY128342
EMBL:BT000014 EMBL:BX831982 IPI:IPI00516322 IPI:IPI00528450
IPI:IPI00528912 RefSeq:NP_568332.2 RefSeq:NP_851041.1
RefSeq:NP_974790.1 UniGene:At.21711 ProteinModelPortal:Q8L7N8
SMR:Q8L7N8 EnsemblPlants:AT5G16540.1 GeneID:831516
KEGG:ath:AT5G16540 GeneFarm:4900 TAIR:At5g16540 eggNOG:NOG281021
InParanoid:Q8L7N8 OMA:SAGNQGM PhylomeDB:Q8L7N8
ProtClustDB:CLSN2690167 Genevestigator:Q8L7N8 Uniprot:Q8L7N8
Length = 375
Score = 329 (120.9 bits), Expect = 2.9e-54, Sum P(2) = 2.9e-54
Identities = 62/131 (47%), Positives = 86/131 (65%)
Query: 129 YPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSES-LPERPGE 187
YP+R GE DCAYY++T C+FG TC+F+HP D K V A + PER G+
Sbjct: 39 YPERHGEPDCAYYIRTGLCRFGSTCRFNHP--------HDRKLVIATARIKGEYPERIGQ 90
Query: 188 PDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCAFYLKNGTCK 247
P+C ++LKT CKFG CKF+HP++K G S + +V + P RP+E C+++L+ G CK
Sbjct: 91 PECEFYLKTGTCKFGVTCKFHHPRNKA-GIDGSVSVNVLSYPLRPNEDDCSYFLRIGQCK 149
Query: 248 FGATCKFDHPK 258
FG TCKF+HP+
Sbjct: 150 FGGTCKFNHPQ 160
Score = 289 (106.8 bits), Expect = 5.4e-25, P = 5.4e-25
Identities = 84/269 (31%), Positives = 127/269 (47%)
Query: 215 IGSSDSGNGDVSALPERPSEPPCAFYLKNGTCKFGATCKFDHPKDFQLPSVGQENGIGEQ 274
+GS D+ D S PER EP CA+Y++ G C+FG+TC+F+HP D +L + GE
Sbjct: 27 LGSDDTMGVDGS-YPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLV-IATARIKGEY 84
Query: 275 NESVIKTD-E---TTGLLNPGMSLFSHAP---AMLHNSKGL-----PIRPGELDCPFYLK 322
E + + + E TG G++ H P A + S + P+RP E DC ++L+
Sbjct: 85 PERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSYFLR 144
Query: 323 TGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAASLGISVVSPAASLYQTIDPRLAQ 382
G CK+G TC++NHP+ + N + P+ ++ + G S + + + PRL
Sbjct: 145 IGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQSLTGQPSYSWSRTSFVANPPRLQD 204
Query: 383 ATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGL 442
+ S S + G ++ V P+ A P +E V
Sbjct: 205 PSGFASGS----QGGLFSSGFHSGNSV-----------PLGFYAL--P-RENV------F 240
Query: 443 PRREGAVHCPYYMKTGTCKYGATCKFDHP 471
P R G C +YMKTG CK+G CKF HP
Sbjct: 241 PERPGQPECQFYMKTGDCKFGTVCKFHHP 269
Score = 253 (94.1 bits), Expect = 7.1e-37, Sum P(3) = 7.1e-37
Identities = 45/81 (55%), Positives = 57/81 (70%)
Query: 180 SLPERPGEPDCPYFLKTQRCKFGSKCKFNHPKD-KLIGSSDSGNGDVSALPERPSEPPCA 238
S PER GEPDC Y+++T C+FGS C+FNHP D KL+ ++ G+ PER +P C
Sbjct: 38 SYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIKGEY---PERIGQPECE 94
Query: 239 FYLKNGTCKFGATCKFDHPKD 259
FYLK GTCKFG TCKF HP++
Sbjct: 95 FYLKTGTCKFGVTCKFHHPRN 115
Score = 252 (93.8 bits), Expect = 2.9e-54, Sum P(2) = 2.9e-54
Identities = 45/82 (54%), Positives = 57/82 (69%)
Query: 390 SLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAV 449
+++P+RPGQ EC +YMKTG CKFG CKFHHP DR +TP + V L+ GLP R G
Sbjct: 238 NVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDR---QTPPPDCV-LSSVGLPLRPGEP 293
Query: 450 HCPYYMKTGTCKYGATCKFDHP 471
C +Y + G CK+G +CKFDHP
Sbjct: 294 LCVFYSRYGICKFGPSCKFDHP 315
Score = 242 (90.2 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 41/76 (53%), Positives = 52/76 (68%)
Query: 182 PERPGEPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCAFYL 241
PERPG+P+C +++KT CKFG+ CKF+HP+D+ D V LP RP EP C FY
Sbjct: 241 PERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSVG-LPLRPGEPLCVFYS 299
Query: 242 KNGTCKFGATCKFDHP 257
+ G CKFG +CKFDHP
Sbjct: 300 RYGICKFGPSCKFDHP 315
Score = 222 (83.2 bits), Expect = 1.0e-22, Sum P(2) = 1.0e-22
Identities = 54/150 (36%), Positives = 72/150 (48%)
Query: 125 NLPVYPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPER 184
N+ YP RP E DC+Y+++ CKFG TCKF+HP + + PV ++ +SL +
Sbjct: 126 NVLSYPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQSLTGQ 185
Query: 185 PGEPDCPYFLKTQRCKFGSKCKF-NHPKDKLIGSS-DSGNG---DVSALP------ERPS 233
P + F + + L S SGN ALP ERP
Sbjct: 186 PSYSWSRTSFVANPPRLQDPSGFASGSQGGLFSSGFHSGNSVPLGFYALPRENVFPERPG 245
Query: 234 EPPCAFYLKNGTCKFGATCKFDHPKDFQLP 263
+P C FY+K G CKFG CKF HP+D Q P
Sbjct: 246 QPECQFYMKTGDCKFGTVCKFHHPRDRQTP 275
Score = 204 (76.9 bits), Expect = 9.9e-14, Sum P(2) = 9.9e-14
Identities = 39/83 (46%), Positives = 51/83 (61%)
Query: 128 VYPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPGE 187
V+P+RPG+ +C +YM+T CKFG CKF HP + PD + SS LP RPGE
Sbjct: 239 VFPERPGQPECQFYMKTGDCKFGTVCKFHHPR-DRQTPPPD-----CVLSSVGLPLRPGE 292
Query: 188 PDCPYFLKTQRCKFGSKCKFNHP 210
P C ++ + CKFG CKF+HP
Sbjct: 293 PLCVFYSRYGICKFGPSCKFDHP 315
Score = 126 (49.4 bits), Expect = 1.0e-50, Sum P(3) = 1.0e-50
Identities = 25/75 (33%), Positives = 37/75 (49%)
Query: 274 QNESVIKTDETTGLLNPGMSLFSHAPA---MLHNSKGLPIRPGELDCPFYLKTGSCKYGS 330
Q+ S + GL + G + P L P RPG+ +C FY+KTG CK+G+
Sbjct: 203 QDPSGFASGSQGGLFSSGFHSGNSVPLGFYALPRENVFPERPGQPECQFYMKTGDCKFGT 262
Query: 331 TCRYNHPERTAINPP 345
C+++HP PP
Sbjct: 263 VCKFHHPRDRQTPPP 277
Score = 118 (46.6 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 299 PAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPER 339
P + +S GLP+RPGE C FY + G CK+G +C+++HP R
Sbjct: 277 PDCVLSSVGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMR 317
Score = 105 (42.0 bits), Expect = 1.0e-50, Sum P(3) = 1.0e-50
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 374 QTIDPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPI 422
QT P +++G+ P RPG+ C +Y + G+CKFG CKF HP+
Sbjct: 273 QTPPPDCVLSSVGL-----PLRPGEPLCVFYSRYGICKFGPSCKFDHPM 316
Score = 40 (19.1 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 93 PTLLGTHTSIGQ-SEAWYSTNSLAKRPRIESAS 124
P + GQ S +W T+ +A PR++ S
Sbjct: 174 PVYSALQSLTGQPSYSWSRTSFVANPPRLQDPS 206
>TAIR|locus:2043368 [details] [associations]
symbol:AT2G47850 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 EMBL:AC005309 EMBL:BT030391
EMBL:BT004106 IPI:IPI00519400 PIR:C84920 RefSeq:NP_001078078.1
RefSeq:NP_182306.2 UniGene:At.21006 ProteinModelPortal:Q84W91
SMR:Q84W91 PaxDb:Q84W91 PRIDE:Q84W91 EnsemblPlants:AT2G47850.1
EnsemblPlants:AT2G47850.3 GeneID:819397 KEGG:ath:AT2G47850
TAIR:At2g47850 eggNOG:NOG312935 HOGENOM:HOG000237733
InParanoid:Q84W91 OMA:RYGVACK PhylomeDB:Q84W91
ProtClustDB:CLSN2680305 Genevestigator:Q84W91 GermOnline:AT2G47850
Uniprot:Q84W91
Length = 468
Score = 312 (114.9 bits), Expect = 1.2e-50, Sum P(2) = 1.2e-50
Identities = 59/130 (45%), Positives = 80/130 (61%)
Query: 129 YPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPGEP 188
YP+RPG DCAYYM+T C +G+ C+++HP + E V A+ + PER GEP
Sbjct: 42 YPERPGAPDCAYYMRTGVCGYGNRCRYNHPR--DRASV----EATVRATGQ-YPERFGEP 94
Query: 189 DCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCAFYLKNGTCKF 248
C ++LKT CKFG+ CKF+HPK+ GS ++ P R + C++YLK G CKF
Sbjct: 95 PCQFYLKTGTCKFGASCKFHHPKNAG-GSMSHVPLNIYGYPVREGDNECSYYLKTGQCKF 153
Query: 249 GATCKFDHPK 258
G TCKF HP+
Sbjct: 154 GITCKFHHPQ 163
Score = 269 (99.8 bits), Expect = 1.2e-50, Sum P(2) = 1.2e-50
Identities = 61/157 (38%), Positives = 81/157 (51%)
Query: 318 PFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAASL-GISVVSPAASLYQTI 376
P L G Y+ P A++P A V A SL G++ ++ +
Sbjct: 216 PMLLTPGVVPIPGWSPYSAPVSPALSPGAQHAVG------ATSLYGVTQLTSTTPSLPGV 269
Query: 377 DPRLAQATLGV--SPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQET 434
P L+ T GV +P+RPG+ EC YY+KTG CKFG CKFHHP DR P +
Sbjct: 270 YPSLSSPT-GVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDR----VPPRAN 324
Query: 435 VKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHP 471
L+ GLP R G C +Y++ G CK+G+TCKFDHP
Sbjct: 325 CVLSPIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHP 361
Score = 267 (99.0 bits), Expect = 3.4e-40, Sum P(3) = 3.4e-40
Identities = 49/107 (45%), Positives = 69/107 (64%)
Query: 158 PIWVP---EGGIPD--WKEVPVIASSESLPERPGEPDCPYFLKTQRCKFGSKCKFNHPKD 212
P W P + G+ + W+ + S+S PERPG PDC Y+++T C +G++C++NHP+D
Sbjct: 17 PDWTPADADTGLQESMWR---LGLGSDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRD 73
Query: 213 KLIGSSDSGNGDVSALPERPSEPPCAFYLKNGTCKFGATCKFDHPKD 259
+ S ++ PER EPPC FYLK GTCKFGA+CKF HPK+
Sbjct: 74 R--ASVEATVRATGQYPERFGEPPCQFYLKTGTCKFGASCKFHHPKN 118
Score = 260 (96.6 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 44/84 (52%), Positives = 59/84 (70%)
Query: 174 VIASSESLPERPGEPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPS 233
VI ++ PERPGEP+C Y+LKT CKFG+ CKF+HP+D++ ++ + LP RP
Sbjct: 279 VIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIG-LPLRPG 337
Query: 234 EPPCAFYLKNGTCKFGATCKFDHP 257
C FY++NG CKFG+TCKFDHP
Sbjct: 338 VQRCTFYVQNGFCKFGSTCKFDHP 361
Score = 247 (92.0 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 47/97 (48%), Positives = 60/97 (61%)
Query: 377 DPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVK 436
D +AT+ + YP+R G+ C +Y+KTG CKFG CKFHHP ++A + S V
Sbjct: 73 DRASVEATVRATGQ-YPERFGEPPCQFYLKTGTCKFGASCKFHHP--KNAGGSMSH--VP 127
Query: 437 LTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHPPP 473
L + G P REG C YY+KTG CK+G TCKF HP P
Sbjct: 128 LNIYGYPVREGDNECSYYLKTGQCKFGITCKFHHPQP 164
Score = 244 (91.0 bits), Expect = 6.9e-18, P = 6.9e-18
Identities = 42/87 (48%), Positives = 59/87 (67%)
Query: 385 LGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPR 444
LG+ YP+RPG +C YYM+TGVC +G +C+++HP DR++ + TV+ T P
Sbjct: 35 LGLGSDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASVEA----TVRAT-GQYPE 89
Query: 445 REGAVHCPYYMKTGTCKYGATCKFDHP 471
R G C +Y+KTGTCK+GA+CKF HP
Sbjct: 90 RFGEPPCQFYLKTGTCKFGASCKFHHP 116
Score = 227 (85.0 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 67/208 (32%), Positives = 102/208 (49%)
Query: 210 PKDKLIGSSDS----GNGDVSALPERPSEPPCAFYLKNGTCKFGATCKFDHPKD-FQLPS 264
P D G +S G G S PERP P CA+Y++ G C +G C+++HP+D + +
Sbjct: 21 PADADTGLQESMWRLGLGSDS-YPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASVEA 79
Query: 265 VGQENG-IGEQ-NESVIKTDETTGLLNPGMSLFSHAP-----AMLH---NSKGLPIRPGE 314
+ G E+ E + TG G S H P +M H N G P+R G+
Sbjct: 80 TVRATGQYPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPVREGD 139
Query: 315 LDCPFYLKTGSCKYGSTCRYNHPER--TAINPPAAAI--VHPLITS--------PAASLG 362
+C +YLKTG CK+G TC+++HP+ T + PP A+ +P + S P++SL
Sbjct: 140 NECSYYLKTGQCKFGITCKFHHPQPAGTTVPPPPASAPQFYPSVQSLMPDQYGGPSSSLR 199
Query: 363 IS-VVSPAASLYQTIDPRLAQATLGVSP 389
++ + P + + P L T GV P
Sbjct: 200 VARTLLPGSYMQGAYGPMLL--TPGVVP 225
Score = 203 (76.5 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 51/161 (31%), Positives = 75/161 (46%)
Query: 75 PGVDPTDHLKRPSEALYHPTLLGTHTSIGQSEAWYSTNSL-AKRPRIESASNL----PVY 129
PG P P+ + +G + G ++ +T SL P + S + + +
Sbjct: 227 PGWSPYSAPVSPALSPGAQHAVGATSLYGVTQLTSTTPSLPGVYPSLSSPTGVIQKEQAF 286
Query: 130 PQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPGEPD 189
P+RPGE +C YY++T CKFG +CKF HP +P + S LP RPG
Sbjct: 287 PERPGEPECQYYLKTGDCKFGTSCKFHHP----RDRVPP--RANCVLSPIGLPLRPGVQR 340
Query: 190 CPYFLKTQRCKFGSKCKFNHPKDKL-IGSSDSGNGDVSALP 229
C ++++ CKFGS CKF+HP + S S D P
Sbjct: 341 CTFYVQNGFCKFGSTCKFDHPMGTIRYNPSASSLADAPVAP 381
Score = 150 (57.9 bits), Expect = 8.9e-47, Sum P(3) = 8.9e-47
Identities = 31/92 (33%), Positives = 53/92 (57%)
Query: 264 SVGQENGIGEQN-ESVIKTDETTGLLNPGMSLFSHAPA-MLHNSKGLPIRPGELDCPFYL 321
S G ++ +G + V + TT L PG+ +P ++ + P RPGE +C +YL
Sbjct: 241 SPGAQHAVGATSLYGVTQLTSTTPSL-PGVYPSLSSPTGVIQKEQAFPERPGEPECQYYL 299
Query: 322 KTGSCKYGSTCRYNHPERTAINPPAAAIVHPL 353
KTG CK+G++C+++HP R + P A ++ P+
Sbjct: 300 KTGDCKFGTSCKFHHP-RDRVPPRANCVLSPI 330
Score = 149 (57.5 bits), Expect = 5.0e-38, Sum P(2) = 5.0e-38
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 307 GLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTA-INPPAAAIVH-PLITSPAASL-GI 363
GLP+RPG C FY++ G CK+GSTC+++HP T NP A+++ P+ P +SL G
Sbjct: 331 GLPLRPGVQRCTFYVQNGFCKFGSTCKFDHPMGTIRYNPSASSLADAPVAPYPVSSLLGA 390
Query: 364 SVVSPAASLYQTI 376
+P++S + I
Sbjct: 391 LAAAPSSSSTELI 403
Score = 140 (54.3 bits), Expect = 9.5e-22, Sum P(3) = 9.5e-22
Identities = 22/33 (66%), Positives = 25/33 (75%)
Query: 227 ALPERPSEPPCAFYLKNGTCKFGATCKFDHPKD 259
A PERP EP C +YLK G CKFG +CKF HP+D
Sbjct: 285 AFPERPGEPECQYYLKTGDCKFGTSCKFHHPRD 317
Score = 121 (47.7 bits), Expect = 6.7e-23, Sum P(3) = 6.7e-23
Identities = 29/68 (42%), Positives = 38/68 (55%)
Query: 125 NLPVYPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGI--PDWKEVPVIASS-ESL 181
N+ YP R G+ +C+YY++T CKFG TCKF HP P G P P S +SL
Sbjct: 129 NIYGYPVREGDNECSYYLKTGQCKFGITCKFHHP--QPAGTTVPPPPASAPQFYPSVQSL 186
Query: 182 -PERPGEP 188
P++ G P
Sbjct: 187 MPDQYGGP 194
Score = 112 (44.5 bits), Expect = 8.9e-47, Sum P(3) = 8.9e-47
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 382 QATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPI 422
+A +SP P RPG C +Y++ G CKFG CKF HP+
Sbjct: 322 RANCVLSPIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHPM 362
>TAIR|locus:2081066 [details] [associations]
symbol:AT3G06410 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 EMBL:AC011623
eggNOG:NOG312935 HOGENOM:HOG000237733 EMBL:AK230312 EMBL:AK230438
IPI:IPI00535086 RefSeq:NP_187292.2 UniGene:At.27771
ProteinModelPortal:Q9SQU4 SMR:Q9SQU4 EnsemblPlants:AT3G06410.1
GeneID:819815 KEGG:ath:AT3G06410 TAIR:At3g06410 InParanoid:Q9SQU4
OMA:SSQQYGL PhylomeDB:Q9SQU4 ProtClustDB:CLSN2681554
Genevestigator:Q9SQU4 GermOnline:AT3G06410 Uniprot:Q9SQU4
Length = 462
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 120/351 (34%), Positives = 181/351 (51%)
Query: 129 YPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPGEP 188
YP+RP E DC YY++T C +G C+F+HP G + V + +LPER G P
Sbjct: 51 YPERPDEPDCIYYLRTGVCGYGSRCRFNHPR--DRGAVIGG----VRGEAGALPERMGHP 104
Query: 189 DCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSAL--PERPSEPPCAFYLKNGTC 246
C +F++T CKFG+ CK++HP+ G S + +S L P RP E C++YL+ G C
Sbjct: 105 VCQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVS-LSYLGYPLRPGEKECSYYLRTGQC 163
Query: 247 KFGATCKFDHPKDFQL---PSVGQENGIGEQNE--SVIKTDETTGLLNPGM-SLFSHAPA 300
KFG TC+F+HP + P Q+ Q + ++ T ++ + + L P+
Sbjct: 164 KFGLTCRFNHPVPLAVQGPPQQPQQQQPQPQPQLQTIYPTLQSQSIPSSQQYGLVLTRPS 223
Query: 301 MLHNSK-GLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAA 359
L S P P P L G Y +N P + +++ + P I S ++
Sbjct: 224 FLTGSYLQSPYGP-----PMVLPPGMVPYSG---WN-PYQASLSAMPSPGTQPSIGS-SS 273
Query: 360 SLGISVVSPAASLYQTIDPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFH 419
G++ +SP+A+ Y T + ++ S +PQRP Q EC Y+M+TG CKFG C++H
Sbjct: 274 IYGLTPLSPSATAY-TGTYQSVPSSNSTSKE-FPQRPDQPECQYFMRTGDCKFGSSCRYH 331
Query: 420 HPIDRSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDH 470
HP+D KT + L+ GLP R G C ++ + G CK+G CKFDH
Sbjct: 332 HPVDAVPPKTG----IVLSSIGLPLRPGVAQCTHFAQHGICKFGPACKFDH 378
Score = 254 (94.5 bits), Expect = 2.1e-26, Sum P(2) = 2.1e-26
Identities = 43/81 (53%), Positives = 58/81 (71%)
Query: 179 ESLPERPGEPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSG-NGDVSALPERPSEPPC 237
ES PERP EPDC Y+L+T C +GS+C+FNHP+D+ G+ G G+ ALPER P C
Sbjct: 49 ESYPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDR--GAVIGGVRGEAGALPERMGHPVC 106
Query: 238 AFYLKNGTCKFGATCKFDHPK 258
+++ GTCKFGA+CK+ HP+
Sbjct: 107 QHFMRTGTCKFGASCKYHHPR 127
Score = 249 (92.7 bits), Expect = 1.8e-25, Sum P(2) = 1.8e-25
Identities = 60/178 (33%), Positives = 85/178 (47%)
Query: 184 RPGEPDCPYFLKTQRCKFGSKCKFNHPKDKL-IGSSDSGNGDVSALPERPSEPPCAFYLK 242
RPGE + G + P +L + G G + PERP EP C +YL+
Sbjct: 6 RPGEEGSRSDPSLEWTSHGGETAVEAPMWRLGLSGGGGGGGGGESYPERPDEPDCIYYLR 65
Query: 243 NGTCKFGATCKFDHPKD--FQLPSV-GQENGIGEQ-NESVIKTDETTGLLNPGMSLFSH- 297
G C +G+ C+F+HP+D + V G+ + E+ V + TG G S H
Sbjct: 66 TGVCGYGSRCRFNHPRDRGAVIGGVRGEAGALPERMGHPVCQHFMRTGTCKFGASCKYHH 125
Query: 298 ----------APAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPP 345
AP L + G P+RPGE +C +YL+TG CK+G TCR+NHP A+ P
Sbjct: 126 PRQGGGGGSVAPVSL-SYLGYPLRPGEKECSYYLRTGQCKFGLTCRFNHPVPLAVQGP 182
Score = 224 (83.9 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 38/81 (46%), Positives = 49/81 (60%)
Query: 393 PQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHCP 452
P+R G C ++M+TG CKFG CK+HHP R S V L+ G P R G C
Sbjct: 98 PERMGHPVCQHFMRTGTCKFGASCKYHHP--RQGGGGGSVAPVSLSYLGYPLRPGEKECS 155
Query: 453 YYMKTGTCKYGATCKFDHPPP 473
YY++TG CK+G TC+F+HP P
Sbjct: 156 YYLRTGQCKFGLTCRFNHPVP 176
Score = 220 (82.5 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 38/83 (45%), Positives = 54/83 (65%)
Query: 392 YPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHC 451
YP+RP + +C YY++TGVC +G +C+F+HP DR A V+ LP R G C
Sbjct: 51 YPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVIGG----VRGEAGALPERMGHPVC 106
Query: 452 PYYMKTGTCKYGATCKFDHPPPG 474
++M+TGTCK+GA+CK+ HP G
Sbjct: 107 QHFMRTGTCKFGASCKYHHPRQG 129
Score = 218 (81.8 bits), Expect = 5.8e-15, P = 5.8e-15
Identities = 61/188 (32%), Positives = 87/188 (46%)
Query: 58 SFRYSGYLSSQAQQPW--PPGVDPTDHLKRPSEALYHPTLLGTHTSIGQSEAW----YST 111
SF YL S P PPG+ P +L GT SIG S + S
Sbjct: 223 SFLTGSYLQSPYGPPMVLPPGMVPYSGWNPYQASLSAMPSPGTQPSIGSSSIYGLTPLSP 282
Query: 112 NSLAKRPRIESA----SNLPVYPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIP 167
++ A +S S +PQRP + +C Y+M+T CKFG +C++ HP+ +P
Sbjct: 283 SATAYTGTYQSVPSSNSTSKEFPQRPDQPECQYFMRTGDCKFGSSCRYHHPV----DAVP 338
Query: 168 DWKEVPVIASSESLPERPGEPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSA 227
+ ++ SS LP RPG C +F + CKFG CKF+H + SS S + S+
Sbjct: 339 P--KTGIVLSSIGLPLRPGVAQCTHFAQHGICKFGPACKFDHS----MSSSLSYSPSASS 392
Query: 228 LPERPSEP 235
L + P P
Sbjct: 393 LTDMPVAP 400
Score = 110 (43.8 bits), Expect = 2.1e-26, Sum P(2) = 2.1e-26
Identities = 27/103 (26%), Positives = 49/103 (47%)
Query: 304 NSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAIN--PPAAAIVH-PLITSPAAS 360
+S GLP+RPG C + + G CK+G C+++H ++++ P A+++ P+ P S
Sbjct: 346 SSIGLPLRPGVAQCTHFAQHGICKFGPACKFDHSMSSSLSYSPSASSLTDMPVAPYPIGS 405
Query: 361 LGISVVS-PAASLYQTIDPRLAQATLGVSPSLYPQRPGQMECD 402
+S S P +S + + A + L P + D
Sbjct: 406 SSLSGSSAPVSSSNEPTKEAVTPAVSSMVSGLSRPEPAETSGD 448
Score = 107 (42.7 bits), Expect = 4.3e-26, Sum P(2) = 4.3e-26
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 393 PQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETV 435
P RPG +C ++ + G+CKFG CKF H + S + +PS ++
Sbjct: 351 PLRPGVAQCTHFAQHGICKFGPACKFDHSMSSSLSYSPSASSL 393
Score = 102 (41.0 bits), Expect = 1.4e-25, Sum P(2) = 1.4e-25
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 421 PIDRSA-AKTPSQETV---KLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHP----P 472
P+ SA A T + ++V T P+R C Y+M+TG CK+G++C++ HP P
Sbjct: 279 PLSPSATAYTGTYQSVPSSNSTSKEFPQRPDQPECQYFMRTGDCKFGSSCRYHHPVDAVP 338
Query: 473 PGEVMAISAL 482
P + +S++
Sbjct: 339 PKTGIVLSSI 348
>TAIR|locus:2182988 [details] [associations]
symbol:AT5G18550 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 eggNOG:NOG312935
HOGENOM:HOG000237733 ProtClustDB:CLSN2681554 EMBL:AC069328
EMBL:BT010886 EMBL:AK230175 IPI:IPI00533261 RefSeq:NP_197356.2
UniGene:At.22535 ProteinModelPortal:Q6NPN3 SMR:Q6NPN3 STRING:Q6NPN3
PaxDb:Q6NPN3 PRIDE:Q6NPN3 EnsemblPlants:AT5G18550.1 GeneID:831973
KEGG:ath:AT5G18550 TAIR:At5g18550 InParanoid:Q6NPN3 OMA:GSQPCAY
PhylomeDB:Q6NPN3 Genevestigator:Q6NPN3 GermOnline:AT5G18550
Uniprot:Q6NPN3
Length = 465
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 118/352 (33%), Positives = 178/352 (50%)
Query: 129 YPQRPGEKDCAYYMQTRTCKFGDTCKFDHPI-WVPE-GGIPDWKEVPVIASSESLPERPG 186
+P+RP E DC YY++T C +G C+F+HP P GG+ + PER G
Sbjct: 48 FPERPDEPDCIYYLRTGVCGYGSRCRFNHPRNRAPVLGGLR--------TEAGEFPERMG 99
Query: 187 EPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNG---DVSALPERPSEPPCAFYLKN 243
+P C +F++T CKFG+ CK++HP+ G DS + P RP E C+++++
Sbjct: 100 QPVCQHFMRTGTCKFGASCKYHHPRQG--GGGDSVTPVSLNYMGFPLRPGEKECSYFMRT 157
Query: 244 GTCKFGATCKFDHP--KDFQLPSVGQENGIGEQNESVIKTDETTGLLNPGMSLFSHAPAM 301
G CKFG+TC++ HP Q PS Q+ + T + + P +
Sbjct: 158 GQCKFGSTCRYHHPVPPGVQAPSQQQQQQLSAGPTMYPSLQSQTVPSSQQYGVVLARPQL 217
Query: 302 LHNSK-GLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAAS 360
L S P G++ P G Y +N P + +++ + P + + +
Sbjct: 218 LPGSYVQSPYGYGQMVLP----PGMVPYSG---WN-PYQASVSAMPSPGTQPSMGTSSV- 268
Query: 361 LGISVVSPAASLYQTIDPRLAQATLGVS--PSLYPQRPGQMECDYYMKTGVCKFGEKCKF 418
GI+ +SP+A YQ+ ++ GVS +PQRP Q EC Y+M+TG CKFG C+F
Sbjct: 269 YGITPLSPSAPAYQS-----GPSSTGVSNKEQTFPQRPEQPECQYFMRTGDCKFGTSCRF 323
Query: 419 HHPIDRSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDH 470
HHP++ A +P T L+ GLP R GAV C ++ + G CK+G CKFDH
Sbjct: 324 HHPME---AASPEAST--LSHIGLPLRPGAVPCTHFAQHGICKFGPACKFDH 370
Score = 252 (93.8 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 65/198 (32%), Positives = 93/198 (46%)
Query: 221 GNGDVSALPERPSEPPCAFYLKNGTCKFGATCKFDHPKDFQLPSVGQ-ENGIGE----QN 275
G G PERP EP C +YL+ G C +G+ C+F+HP++ + P +G GE
Sbjct: 41 GGGGGETFPERPDEPDCIYYLRTGVCGYGSRCRFNHPRN-RAPVLGGLRTEAGEFPERMG 99
Query: 276 ESVIKTDETTGLLNPGMSLFSHAPA----------MLHNSKGLPIRPGELDCPFYLKTGS 325
+ V + TG G S H P + N G P+RPGE +C ++++TG
Sbjct: 100 QPVCQHFMRTGTCKFGASCKYHHPRQGGGGDSVTPVSLNYMGFPLRPGEKECSYFMRTGQ 159
Query: 326 CKYGSTCRYNHPERTAINPPAAAIVHPLITSPAASLGI-SVVSPAASLYQTIDPRLAQAT 384
CK+GSTCRY+HP + P+ L P + S P++ Y + LA+
Sbjct: 160 CKFGSTCRYHHPVPPGVQAPSQQQQQQLSAGPTMYPSLQSQTVPSSQQYGVV---LARPQ 216
Query: 385 LGVSPSLYPQRP---GQM 399
L P Y Q P GQM
Sbjct: 217 L--LPGSYVQSPYGYGQM 232
Score = 240 (89.5 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 47/116 (40%), Positives = 64/116 (55%)
Query: 392 YPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHC 451
+P+R GQ C ++M+TG CKFG CK+HHP R S V L G P R G C
Sbjct: 94 FPERMGQPVCQHFMRTGTCKFGASCKYHHP--RQGGGGDSVTPVSLNYMGFPLRPGEKEC 151
Query: 452 PYYMKTGTCKYGATCKFDHP-PPGEVMAISALDGTSTAVGEEVKGDEKESEVAPST 506
Y+M+TG CK+G+TC++ HP PPG V A S + G + +S+ PS+
Sbjct: 152 SYFMRTGQCKFGSTCRYHHPVPPG-VQAPSQQQQQQLSAGPTMY-PSLQSQTVPSS 205
Score = 231 (86.4 bits), Expect = 8.7e-23, Sum P(2) = 8.7e-23
Identities = 38/82 (46%), Positives = 58/82 (70%)
Query: 179 ESLPERPGEPDCPYFLKTQRCKFGSKCKFNHPKDK--LIGSSDSGNGDVSALPERPSEPP 236
E+ PERP EPDC Y+L+T C +GS+C+FNHP+++ ++G + G+ PER +P
Sbjct: 46 ETFPERPDEPDCIYYLRTGVCGYGSRCRFNHPRNRAPVLGGLRTEAGE---FPERMGQPV 102
Query: 237 CAFYLKNGTCKFGATCKFDHPK 258
C +++ GTCKFGA+CK+ HP+
Sbjct: 103 CQHFMRTGTCKFGASCKYHHPR 124
Score = 102 (41.0 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 393 PQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAK-TPSQETVK-LTLAGLPRREGAV 449
P RPG + C ++ + G+CKFG CKF H + S+ +PS ++ + +A P G +
Sbjct: 343 PLRPGAVPCTHFAQHGICKFGPACKFDHSLGSSSLSYSPSPSSLTDMPVAPYPSSLGTL 401
Score = 99 (39.9 bits), Expect = 5.5e-25, Sum P(2) = 5.5e-25
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 430 PSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHP 471
PS V P+R C Y+M+TG CK+G +C+F HP
Sbjct: 285 PSSTGVSNKEQTFPQRPEQPECQYFMRTGDCKFGTSCRFHHP 326
>TAIR|locus:2101170 [details] [associations]
symbol:AT3G48440 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 EMBL:AL049659
HOGENOM:HOG000237733 EMBL:BT033139 IPI:IPI00517303 PIR:T06698
RefSeq:NP_190414.1 UniGene:At.50258 ProteinModelPortal:Q9STM4
SMR:Q9STM4 PaxDb:Q9STM4 PRIDE:Q9STM4 EnsemblPlants:AT3G48440.1
GeneID:824003 KEGG:ath:AT3G48440 TAIR:At3g48440 eggNOG:NOG288127
InParanoid:Q9STM4 OMA:PEWNGYQ PhylomeDB:Q9STM4
ProtClustDB:CLSN2719348 Genevestigator:Q9STM4 GermOnline:AT3G48440
Uniprot:Q9STM4
Length = 448
Score = 318 (117.0 bits), Expect = 4.4e-27, P = 4.4e-27
Identities = 94/287 (32%), Positives = 137/287 (47%)
Query: 216 GSSDSGNGDVSALPERPSEPPCAFYLKNGTCKFGATCKFDHP--KDFQLPSVGQENGIGE 273
G S N + P RP C+FY++ G+CKFG++CKF+HP + FQ + ++N + E
Sbjct: 95 GDGWSENESENVYPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQ---IARDNKVRE 151
Query: 274 QNES-----VI--KTDETTGLLNPGMSL-FSH-------APAMLHNSKGLPIRPGELDCP 318
+ + +I K TG G + F+H A A N GLP+RPGE++CP
Sbjct: 152 KEDDGGKLGLIDCKYYFRTGGCKYGETCRFNHTIPKSGLASAPELNFLGLPLRPGEVECP 211
Query: 319 FYLKTGSCKYGSTCRYNHPERTAI-----------NPPAAAIVHPLITSPAASLGISVVS 367
+Y++ GSCKYG+ C++NHP+ T I N + P T A+S S
Sbjct: 212 YYMRNGSCKYGAECKFNHPDPTTIGGTDSPSFRGNNGVSIGTFSPKATFQASSTSWSSPR 271
Query: 368 PAASLYQTIDPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAA 427
I L+Q T GV+ S P+ G Y + GV F + ++ S+A
Sbjct: 272 HVNGTSPFIPVMLSQ-THGVT-SQNPEWNGYQASVYSSERGV--FSPSTTYL--MNNSSA 325
Query: 428 KTP---SQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHP 471
+T SQ ++ P R C YYMKTG CK+ CK+ HP
Sbjct: 326 ETSMLLSQYRHQMPAEEFPERPDQPECSYYMKTGDCKFKFNCKYHHP 372
Score = 298 (110.0 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 74/227 (32%), Positives = 111/227 (48%)
Query: 137 DCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPGEPDCPYFLKT 196
DC YY +T CK+G+TC+F+H I P+ G+ E+ + LP RPGE +CPY+++
Sbjct: 163 DCKYYFRTGGCKYGETCRFNHTI--PKSGLASAPELNFLG----LPLRPGEVECPYYMRN 216
Query: 197 QRCKFGSKCKFNHPKDKLIGSSDS----GNGDVSA---LPERPSEPPCAFYLK----NGT 245
CK+G++CKFNHP IG +DS GN VS P+ + + NGT
Sbjct: 217 GSCKYGAECKFNHPDPTTIGGTDSPSFRGNNGVSIGTFSPKATFQASSTSWSSPRHVNGT 276
Query: 246 CKF-GATCKFDHPKDFQLPSVGQENGIGEQNESVIKTDETTGLLNPGMSLFSHAPAMLHN 304
F H Q P +E + + TT L+N + S + +
Sbjct: 277 SPFIPVMLSQTHGVTSQNPEWNGYQASVYSSERGVFSPSTTYLMNNSSAETSMLLSQYRH 336
Query: 305 ---SKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPE-RTAINPPAA 347
++ P RP + +C +Y+KTG CK+ C+Y+HP+ R PP A
Sbjct: 337 QMPAEEFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYA 383
Score = 295 (108.9 bits), Expect = 6.2e-42, Sum P(2) = 6.2e-42
Identities = 70/192 (36%), Positives = 99/192 (51%)
Query: 128 VYPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPGE 187
VYP RPG +DC++YM+T +CKFG +CKF+HP+ D K + E + G
Sbjct: 106 VYPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQIARDNK----VREKEDDGGKLGL 161
Query: 188 PDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCAFYLKNGTCK 247
DC Y+ +T CK+G C+FNH K G + + + LP RP E C +Y++NG+CK
Sbjct: 162 IDCKYYFRTGGCKYGETCRFNHTIPKS-GLASAPELNFLGLPLRPGEVECPYYMRNGSCK 220
Query: 248 FGATCKFDHPKDFQL-----PSVGQENG--IGEQNESVIKTDETTGLLNP----GMSLFS 296
+GA CKF+HP + PS NG IG + +T +P G S F
Sbjct: 221 YGAECKFNHPDPTTIGGTDSPSFRGNNGVSIGTFSPKATFQASSTSWSSPRHVNGTSPF- 279
Query: 297 HAPAMLHNSKGL 308
P ML + G+
Sbjct: 280 -IPVMLSQTHGV 290
Score = 233 (87.1 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 41/78 (52%), Positives = 52/78 (66%)
Query: 397 GQMECDYYMKTGVCKFGEKCKFHHPIDRSA-AKTPSQETVKLTLAGLPRREGAVHCPYYM 455
G ++C YY +TG CK+GE C+F+H I +S A P +L GLP R G V CPYYM
Sbjct: 160 GLIDCKYYFRTGGCKYGETCRFNHTIPKSGLASAP-----ELNFLGLPLRPGEVECPYYM 214
Query: 456 KTGTCKYGATCKFDHPPP 473
+ G+CKYGA CKF+HP P
Sbjct: 215 RNGSCKYGAECKFNHPDP 232
Score = 211 (79.3 bits), Expect = 7.2e-14, Sum P(2) = 7.2e-14
Identities = 38/91 (41%), Positives = 53/91 (58%)
Query: 388 SPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREG 447
S ++YP RPG +C +YM+TG CKFG CKF+HP+ R + + G + G
Sbjct: 103 SENVYPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQIARDNKVREKEDDG--GKLG 160
Query: 448 AVHCPYYMKTGTCKYGATCKFDHPPPGEVMA 478
+ C YY +TG CKYG TC+F+H P +A
Sbjct: 161 LIDCKYYFRTGGCKYGETCRFNHTIPKSGLA 191
Score = 206 (77.6 bits), Expect = 6.2e-42, Sum P(2) = 6.2e-42
Identities = 40/84 (47%), Positives = 47/84 (55%)
Query: 392 YPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHC 451
+P+RP Q EC YYMKTG CKF CK+HHP +R P L GLP R C
Sbjct: 343 FPERPDQPECSYYMKTGDCKFKFNCKYHHPKNR----LPKLPPYALNDKGLPLRPDQNIC 398
Query: 452 PYYMKTGTCKYGATCKFDHP--PP 473
YY + G CK+G C+FDH PP
Sbjct: 399 TYYSRYGICKFGPACRFDHSVQPP 422
Score = 205 (77.2 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 35/79 (44%), Positives = 48/79 (60%)
Query: 178 SESLPERPGEPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPC 237
+E PERP +P+C Y++KT CKF CK++HPK++L D LP RP + C
Sbjct: 340 AEEFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALND-KGLPLRPDQNIC 398
Query: 238 AFYLKNGTCKFGATCKFDH 256
+Y + G CKFG C+FDH
Sbjct: 399 TYYSRYGICKFGPACRFDH 417
Score = 172 (65.6 bits), Expect = 3.0e-27, Sum P(2) = 3.0e-27
Identities = 38/106 (35%), Positives = 56/106 (52%)
Query: 178 SESL-PERPGEPDCPYFLKTQRCKFGSKCKFNHP--------KDKLIGSSDSGNGDVSAL 228
SE++ P RPG DC ++++T CKFGS CKFNHP +D + + G + +
Sbjct: 103 SENVYPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQIARDNKVREKEDDGGKLGLI 162
Query: 229 PERPSEPPCAFYLKNGTCKFGATCKFDH--PKDFQLPSVGQENGIG 272
C +Y + G CK+G TC+F+H PK L S + N +G
Sbjct: 163 D-------CKYYFRTGGCKYGETCRFNHTIPKS-GLASAPELNFLG 200
Score = 170 (64.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 37/109 (33%), Positives = 57/109 (52%)
Query: 105 SEAWYSTNSLAKRPRIESA--SNLPV--YPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIW 160
S + NS A+ + S +P +P+RP + +C+YYM+T CKF CK+ HP
Sbjct: 315 STTYLMNNSSAETSMLLSQYRHQMPAEEFPERPDQPECSYYMKTGDCKFKFNCKYHHP-- 372
Query: 161 VPEGGIPDWKEVPVIASSESLPERPGEPDCPYFLKTQRCKFGSKCKFNH 209
+ +P K P + + LP RP + C Y+ + CKFG C+F+H
Sbjct: 373 --KNRLP--KLPPYALNDKGLPLRPDQNICTYYSRYGICKFGPACRFDH 417
Score = 112 (44.5 bits), Expect = 4.5e-32, Sum P(2) = 4.5e-32
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 299 PAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAA-AIVHP 352
P N KGLP+RP + C +Y + G CK+G CR++H + + ++ AIV P
Sbjct: 380 PPYALNDKGLPLRPDQNICTYYSRYGICKFGPACRFDHSVQPPYSTESSQAIVEP 434
Score = 101 (40.6 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 393 PQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVK 436
P RP Q C YY + G+CKFG C+F H + + SQ V+
Sbjct: 390 PLRPDQNICTYYSRYGICKFGPACRFDHSVQPPYSTESSQAIVE 433
Score = 38 (18.4 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 261 QLPSVGQENGIGEQNESVIKTDETTGLLN 289
+L +VG EQ+E ++ E+ G L+
Sbjct: 43 KLKNVGLNEVTKEQSEKMMSVSESNGGLD 71
>TAIR|locus:2010562 [details] [associations]
symbol:AT1G04990 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=RCA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003723 GO:GO:0090305 EMBL:AC004809
GO:GO:0004518 HOGENOM:HOG000237733 EMBL:AY048253 EMBL:AY113065
IPI:IPI00522113 PIR:F86183 RefSeq:NP_563725.1 RefSeq:NP_973759.1
UniGene:At.21743 ProteinModelPortal:Q94AD9 SMR:Q94AD9 PaxDb:Q94AD9
PRIDE:Q94AD9 EnsemblPlants:AT1G04990.1 EnsemblPlants:AT1G04990.2
GeneID:839351 KEGG:ath:AT1G04990 TAIR:At1g04990 eggNOG:NOG290936
InParanoid:Q94AD9 OMA:THQRISP PhylomeDB:Q94AD9
ProtClustDB:CLSN2687681 Genevestigator:Q94AD9 GermOnline:AT1G04990
Uniprot:Q94AD9
Length = 404
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 100/309 (32%), Positives = 145/309 (46%)
Query: 129 YPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPGEP 188
YP RPGE+DC +Y++T C +G +C+++HP +P+ V E LPER G+P
Sbjct: 44 YPDRPGERDCQFYLRTGLCGYGSSCRYNHPTHLPQD---------VAYYKEELPERIGQP 94
Query: 189 DCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCAFYLKNGTCKF 248
DC YFLKT CK+G CK++HPKD+ + +V LP R E PC +YL+ GTC+F
Sbjct: 95 DCEYFLKTGACKYGPTCKYHHPKDR--NGAQPVMFNVIGLPMRLGEKPCPYYLRTGTCRF 152
Query: 249 GATCKFDHPKDFQLPSVGQENGIGEQN--------ESVIKTDETTGLLNPGMSLFSHAPA 300
G CKF HP+ P G G + S + T G L S+ P
Sbjct: 153 GVACKFHHPQ----PDNGHSTAYGMSSFPAADLRYASGLTMMSTYGTLPRPQVPQSYVPI 208
Query: 301 MLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITS---P 357
++ S+G P + P Y+ + Y + + +A A A+ L S P
Sbjct: 209 LVSPSQGF--LPPQGWAP-YMAASNSMYNVKNQPYYSGSSASMAMAVALNRGLSESSDQP 265
Query: 358 AASLGISVVSPAAS---LYQTIDPRLAQATLG-VSPSLYPQRPGQMECDYYMKTGVCKFG 413
++ + Y R++Q ++P + P RPGQ C + G CKFG
Sbjct: 266 ECRFFMNTGTCKYGDDCKYSHPGVRISQPPPSLINPFVLPARPGQPACGNFRSYGFCKFG 325
Query: 414 EKCKFHHPI 422
CKF HP+
Sbjct: 326 PNCKFDHPM 334
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 99/311 (31%), Positives = 140/311 (45%)
Query: 182 PERPGEPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCAFYL 241
P+RPGE DC ++L+T C +GS C++NHP D LPER +P C ++L
Sbjct: 45 PDRPGERDCQFYLRTGLCGYGSSCRYNHPTHL---PQDVAYYK-EELPERIGQPDCEYFL 100
Query: 242 KNGTCKFGATCKFDHPKDFQLPSVGQENGIG---EQNESVIKTDETTGLLNPGMSL-FSH 297
K G CK+G TCK+ HPKD N IG E TG G++ F H
Sbjct: 101 KTGACKYGPTCKYHHPKDRNGAQPVMFNVIGLPMRLGEKPCPYYLRTGTCRFGVACKFHH 160
Query: 298 A-PAMLHNSK-GLPIRPG-ELDCPFYLKTGSCKYGSTCRYNHPERTA--INPPAAAIVHP 352
P H++ G+ P +L L T YG+ R P+ + P+ + P
Sbjct: 161 PQPDNGHSTAYGMSSFPAADLRYASGL-TMMSTYGTLPRPQVPQSYVPILVSPSQGFLPP 219
Query: 353 LITSPAASLGISVVSPAASLYQTIDPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKF 412
+P + S+ + Y + + ++ L + Q EC ++M TG CK+
Sbjct: 220 QGWAPYMAASNSMYNVKNQPYYSGSSASMAMAVALNRGL-SESSDQPECRFFMNTGTCKY 278
Query: 413 GEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHP- 471
G+ CK+ HP R + PS + LP R G C + G CK+G CKFDHP
Sbjct: 279 GDDCKYSHPGVRISQPPPSL----INPFVLPARPGQPACGNFRSYGFCKFGPNCKFDHPM 334
Query: 472 -P-PGEVMAIS 480
P PG MA S
Sbjct: 335 LPYPGLTMATS 345
Score = 281 (104.0 bits), Expect = 9.6e-23, P = 9.6e-23
Identities = 83/272 (30%), Positives = 132/272 (48%)
Query: 218 SDSGNGDVSALPERPSEPPCAFYLKNGTCKFGATCKFDHP----KDFQLPSVGQENGIGE 273
+++G +++ P+RP E C FYL+ G C +G++C+++HP +D IG+
Sbjct: 34 NETGVEELNPYPDRPGERDCQFYLRTGLCGYGSSCRYNHPTHLPQDVAYYKEELPERIGQ 93
Query: 274 QN-ESVIKTDETTGLLNPGMSLFSHAPA-------MLHNSKGLPIRPGELDCPFYLKTGS 325
+ E +KT G G + H P ++ N GLP+R GE CP+YL+TG+
Sbjct: 94 PDCEYFLKT----GACKYGPTCKYHHPKDRNGAQPVMFNVIGLPMRLGEKPCPYYLRTGT 149
Query: 326 CKYGSTCRYNHPERTAINPPAAAIVHPLITSPAASLGISVVSPAASLYQTID-PRLAQAT 384
C++G C+++HP+ N + A + + + PAA L + S Y T+ P++ Q+
Sbjct: 150 CRFGVACKFHHPQPD--NGHSTA--YGMSSFPAADLRYASGLTMMSTYGTLPRPQVPQSY 205
Query: 385 LG--VSPS---LYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTL 439
+ VSPS L PQ G YM + K + ++ S + V L
Sbjct: 206 VPILVSPSQGFLPPQ--GWAP---YMAASNSMYNVKNQPYY----SGSSASMAMAVALN- 255
Query: 440 AGLPRREGAVHCPYYMKTGTCKYGATCKFDHP 471
GL C ++M TGTCKYG CK+ HP
Sbjct: 256 RGLSESSDQPECRFFMNTGTCKYGDDCKYSHP 287
>TAIR|locus:1006230718 [details] [associations]
symbol:AT1G48195 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 EMBL:AC023673 EMBL:BX818039 IPI:IPI00522286
RefSeq:NP_973988.1 UniGene:At.38465 UniGene:At.63148
ProteinModelPortal:Q3ECU8 SMR:Q3ECU8 EnsemblPlants:AT1G48195.1
GeneID:2745816 KEGG:ath:AT1G48195 TAIR:At1g48195 eggNOG:NOG304278
HOGENOM:HOG000107451 InParanoid:Q3ECU8 OMA:AICPHYS PhylomeDB:Q3ECU8
ProtClustDB:CLSN2681286 Genevestigator:Q3ECU8 Uniprot:Q3ECU8
Length = 82
Score = 215 (80.7 bits), Expect = 7.4e-17, P = 7.4e-17
Identities = 38/84 (45%), Positives = 51/84 (60%)
Query: 387 VSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRRE 446
+S +P+RPG+ EC YY++TG C + CK+HHP + TPS+ L GLP R
Sbjct: 1 MSEEKFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNI----TPSEPQCTLNDKGLPLRP 56
Query: 447 GAVHCPYYMKTGTCKYGATCKFDH 470
G CP+Y + G C+ G TCKFDH
Sbjct: 57 GQAICPHYSRFGICRSGPTCKFDH 80
Score = 195 (73.7 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 35/80 (43%), Positives = 46/80 (57%)
Query: 177 SSESLPERPGEPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPP 236
S E PERPGEP+C Y+L+T C CK++HPK+ + S + LP RP +
Sbjct: 2 SEEKFPERPGEPECSYYLRTGNCYLKQNCKYHHPKN-ITPSEPQCTLNDKGLPLRPGQAI 60
Query: 237 CAFYLKNGTCKFGATCKFDH 256
C Y + G C+ G TCKFDH
Sbjct: 61 CPHYSRFGICRSGPTCKFDH 80
Score = 160 (61.4 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 29/81 (35%), Positives = 45/81 (55%)
Query: 129 YPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPGEP 188
+P+RPGE +C+YY++T C CK+ HP + P E + + LP RPG+
Sbjct: 6 FPERPGEPECSYYLRTGNCYLKQNCKYHHP----KNITPS--EPQCTLNDKGLPLRPGQA 59
Query: 189 DCPYFLKTQRCKFGSKCKFNH 209
CP++ + C+ G CKF+H
Sbjct: 60 ICPHYSRFGICRSGPTCKFDH 80
Score = 113 (44.8 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 299 PAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNH 336
P N KGLP+RPG+ CP Y + G C+ G TC+++H
Sbjct: 43 PQCTLNDKGLPLRPGQAICPHYSRFGICRSGPTCKFDH 80
Score = 110 (43.8 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 229 PERPSEPPCAFYLKNGTCKFGATCKFDHPKDFQLPSVGQ 267
PERP EP C++YL+ G C CK+ HPK+ PS Q
Sbjct: 7 PERPGEPECSYYLRTGNCYLKQNCKYHHPKNIT-PSEPQ 44
Score = 105 (42.0 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 309 PIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAI 349
P RPGE +C +YL+TG+C C+Y+HP+ + P +
Sbjct: 7 PERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTL 47
>TAIR|locus:2013763 [details] [associations]
symbol:AT1G29570 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0048445 "carpel morphogenesis" evidence=RCA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 EMBL:AC068667 IPI:IPI00519526 PIR:G86418
RefSeq:NP_174250.1 UniGene:At.51822 EnsemblPlants:AT1G29570.1
GeneID:839834 KEGG:ath:AT1G29570 TAIR:At1g29570 eggNOG:NOG325481
HOGENOM:HOG000107458 OMA:HIMDRNV PhylomeDB:Q9C7P4
ProtClustDB:CLSN2914472 Genevestigator:Q9C7P4 Uniprot:Q9C7P4
Length = 321
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 302 LHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVH 351
+ S P+RPG+ DC FYLK G C+Y S+CR+NHP + P H
Sbjct: 46 MRQSSPYPVRPGKKDCQFYLKNGLCRYRSSCRFNHPTQRPQELPVRICKH 95
Score = 115 (45.5 bits), Expect = 0.00080, P = 0.00080
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 390 SLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDR 424
S YP RPG+ +C +Y+K G+C++ C+F+HP R
Sbjct: 50 SPYPVRPGKKDCQFYLKNGLCRYRSSCRFNHPTQR 84
>FB|FBgn0030578 [details] [associations]
symbol:CG5347 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50089 PROSITE:PS50103
SMART:SM00184 SMART:SM00356 Pfam:PF00097 Prosite:PS00518
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 GO:GO:0003676
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR026290 PANTHER:PTHR11224 eggNOG:NOG268458 KO:K15687
GeneTree:ENSGT00390000014093 EMBL:AY118346 RefSeq:NP_572970.1
UniGene:Dm.13454 SMR:Q9VY20 EnsemblMetazoa:FBtr0073936 GeneID:32403
KEGG:dme:Dmel_CG5347 UCSC:CG5347-RA FlyBase:FBgn0030578
InParanoid:Q9VY20 OrthoDB:EOG4FQZ7F GenomeRNAi:32403 NextBio:778288
Uniprot:Q9VY20
Length = 285
Score = 113 (44.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 33/109 (30%), Positives = 46/109 (42%)
Query: 231 RPSEPPCAFYLKNGTCKFGATCKFDH----PKDFQLPSVGQENGIGEQNESVIKTDETTG 286
R S+ C F+L G C+FG C+F H P D Q P + + +NE V+ + +
Sbjct: 4 RRSQTICRFHLL-GICRFGDLCRFSHDETTPNDNQSPQISEIADEVVENEQVVASTSSYS 62
Query: 287 LLNPGMSLFSHAPAMLHNSKGLPIRPGELD-CPFYLKTGSCKYGSTCRY 334
+ P NS G D CP+ GSC +GS C Y
Sbjct: 63 RQMTWANAPEFVPRYKANSADFQATEGVQDICPY---GGSCIWGSKCSY 108
Score = 58 (25.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 390 SLYPQRPGQMECDYYMK-TGVCKFGEKCKFHH 420
S Y G +C Y+ G C FG KC + H
Sbjct: 237 SEYRAAMGAKDCKYFNGGLGKCPFGNKCFYRH 268
Score = 45 (20.9 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 447 GAVHCPYYMK-TGTCKYGATCKFDH 470
GA C Y+ G C +G C + H
Sbjct: 244 GAKDCKYFNGGLGKCPFGNKCFYRH 268
>ZFIN|ZDB-GENE-020213-2 [details] [associations]
symbol:mkrn2 "makorin, ring finger protein, 2"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=ISS] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50089 PROSITE:PS50103
SMART:SM00184 SMART:SM00356 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 ZFIN:ZDB-GENE-020213-2 GO:GO:0007399 GO:GO:0030154
GO:GO:0006355 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0006351 GO:GO:0003676 GO:GO:0016567 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5084
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224
HOGENOM:HOG000252976 KO:K15687 GeneTree:ENSGT00390000014093
HOVERGEN:HBG066965 EMBL:AF277172 EMBL:BC065352 IPI:IPI00493411
RefSeq:NP_694511.1 UniGene:Dr.77762 STRING:Q9DFG8
Ensembl:ENSDART00000019997 Ensembl:ENSDART00000130504 GeneID:170783
KEGG:dre:170783 CTD:23609 OrthoDB:EOG4229K2 NextBio:20797101
ArrayExpress:Q9DFG8 Bgee:Q9DFG8 InterPro:IPR026293
PANTHER:PTHR11224:SF17 Uniprot:Q9DFG8
Length = 414
Score = 111 (44.1 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 46/172 (26%), Positives = 70/172 (40%)
Query: 190 CPYFLKTQRCKFGSKCKFNHPKDKLIGS---SDSGN-GDVSALPERPSE-PPC--AFYLK 242
C Y+ + C +G +C+++H K GS +D N SA P PP + +LK
Sbjct: 37 CKYYQRGA-CAYGDRCRYDHIKPPGRGSGAPADHSNRSSSSAGASAPGPGPPANTSKHLK 95
Query: 243 NG-TCKFGATCKFDHPKDFQLPSVGQENGIGEQ-NESVIKTDETTGLLNPGMSLFSHAPA 300
+ A C P+ F S + N EQ ++ K + G+ + A A
Sbjct: 96 KPLVLRDKALCSDSRPRVFSAES-SELNECWEQRDDGAQKPHSYLEAIRSGLDASAAAAA 154
Query: 301 MLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHP 352
L ++ CPF L G C+YG +C Y H E I ++HP
Sbjct: 155 TAGTFPELQQTSPQI-CPF-LAAGQCQYGESCPYLHGEMCEIC--RQHVLHP 202
Score = 58 (25.5 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 401 CDYYMK-TGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAV 449
C Y+ + G C FG KC + H P + +L+ G R + +V
Sbjct: 326 CKYFDQGRGTCPFGGKCFYMHAYADGRRAEPDKPRKQLSAEGNVRFQNSV 375
Score = 47 (21.6 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 451 CPYYMK-TGTCKYGATCKFDH 470
C Y+ + GTC +G C + H
Sbjct: 326 CKYFDQGRGTCPFGGKCFYMH 346
Score = 44 (20.5 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 138 CAYYMQTRTCKFGDTCKFDHPI 159
C Y++ C+ G C F H +
Sbjct: 8 CRYFLHG-VCREGSRCLFSHDL 28
>UNIPROTKB|C9IZP5 [details] [associations]
symbol:MKRN1 "E3 ubiquitin-protein ligase makorin-1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 InterPro:IPR026290 PANTHER:PTHR11224
EMBL:AC069335 HGNC:HGNC:7112 IPI:IPI00947058
ProteinModelPortal:C9IZP5 SMR:C9IZP5 STRING:C9IZP5
Ensembl:ENST00000473444 HOGENOM:HOG000213911 ArrayExpress:C9IZP5
Bgee:C9IZP5 Uniprot:C9IZP5
Length = 102
Score = 75 (31.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 19/65 (29%), Positives = 32/65 (49%)
Query: 396 PGQMECDYYMKTGVCKFGEKCKFHH--PIDRSAAKTPSQETVKLTLAGLPRREGAVHCPY 453
P + C Y+ + G C +G++C++ H P+ + A T ++ T K +LA V
Sbjct: 36 PYSVVCKYFQR-GYCIYGDRCRYEHSKPLKQEEA-TATELTTKSSLAASSSLSSIVGPLV 93
Query: 454 YMKTG 458
M TG
Sbjct: 94 EMNTG 98
Score = 55 (24.4 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 134 GEKDCAYYMQTRTCKFGDTCKFDHPI 159
G+ + Y+M CK GD C++ H +
Sbjct: 8 GKLNLGYFMHG-VCKEGDNCRYSHDL 32
Score = 50 (22.7 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 240 YLKNGTCKFGATCKFDH 256
Y +G CK G C++ H
Sbjct: 14 YFMHGVCKEGDNCRYSH 30
Score = 43 (20.2 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 186 GEPDCPYFLKTQRCKFGSKCKFNH 209
G+ + YF+ CK G C+++H
Sbjct: 8 GKLNLGYFMHGV-CKEGDNCRYSH 30
>UNIPROTKB|F1SRP7 [details] [associations]
symbol:MKRN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000571 Pfam:PF00642
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50103 SMART:SM00184
SMART:SM00356 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0003682 GO:GO:0003676 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224 KO:K15687
CTD:23608 GeneTree:ENSGT00390000014093 OMA:YQRGCCA EMBL:CU655865
RefSeq:XP_003134656.1 UniGene:Ssc.10393 Ensembl:ENSSSCT00000017962
GeneID:100514261 KEGG:ssc:100514261 Uniprot:F1SRP7
Length = 482
Score = 100 (40.3 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 49/196 (25%), Positives = 76/196 (38%)
Query: 320 YLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAASLGIS-VVSPAASLYQ-TID 377
Y + G C YG CRY H + A + +S AAS +S VV P + +
Sbjct: 92 YFQRGYCIYGDRCRYEHSKPLKQEETTATDL-TAESSLAASSSLSAVVGPIVEMNMGEAE 150
Query: 378 PRLAQ-ATLGVSPSLYPQR----PGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQ 432
R + AT+G + PGQ C + C P+ S K Q
Sbjct: 151 SRNSNFATVGAGSEDWVNAIEFVPGQPYCG--------RTAPSCT-EAPLQSSVTK---Q 198
Query: 433 ETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHPPPGEVMAISALDGTSTAVGEE 492
E+ K A +++ CPY G C+YG C + H P ++ + L A +
Sbjct: 199 ESEKEQTAVETKKQ---LCPY-AAVGECRYGENCVYLHGDPCDMCGLQVLHPVDAAQRSQ 254
Query: 493 -----VKGDEKESEVA 503
++ EK+ E++
Sbjct: 255 HIKSCIEAHEKDMELS 270
Score = 58 (25.5 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 138 CAYYMQTRTCKFGDTCKFDHPI 159
C Y+M CK GD C++ H +
Sbjct: 61 CRYFMHG-VCKEGDNCRYSHDL 81
Score = 57 (25.1 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 178 SESLPERPGEPDCPYFLKTQRCKFGSKCKFNHPK 211
S L + P C YF + C +G +C++ H K
Sbjct: 78 SHDLSDSPYGVVCKYFQRGY-CIYGDRCRYEHSK 110
Score = 54 (24.1 bits), Expect = 6.0e-05, Sum P(3) = 6.0e-05
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 228 LPERPSEPPCAFYLKNGTCKFGATCKFDHPK 258
L + P C Y + G C +G C+++H K
Sbjct: 81 LSDSPYGVVCK-YFQRGYCIYGDRCRYEHSK 110
Score = 48 (22.0 bits), Expect = 0.00058, Sum P(3) = 0.00058
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 190 CPYFLKTQRCKFGSKCKFNH 209
C YF+ CK G C+++H
Sbjct: 61 CRYFMHGV-CKEGDNCRYSH 79
>UNIPROTKB|F1NI93 [details] [associations]
symbol:MKRN2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000571
Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50103
SMART:SM00184 SMART:SM00356 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR026290
PANTHER:PTHR11224 GeneTree:ENSGT00390000014093 InterPro:IPR026293
PANTHER:PTHR11224:SF17 OMA:KGYCAYG EMBL:AADN02013930
IPI:IPI00584461 Ensembl:ENSGALT00000007996 Uniprot:F1NI93
Length = 417
Score = 92 (37.4 bits), Expect = 4.1e-05, Sum P(3) = 4.1e-05
Identities = 41/182 (22%), Positives = 71/182 (39%)
Query: 178 SESLPERPGEPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGN----GDVSALPERPS 233
S L C Y+ K Q C +G++C+++H + G + + + L RP+
Sbjct: 25 SHDLSSSKSSTVCKYYQKGQ-CAYGARCRYDHIRLPASGGAAAPAPPPMASAALLSPRPA 83
Query: 234 EPPCAFYLKNGTCKFGATCKFDHP-KDFQLPSVGQENG-IGEQNESVIKTDETTGL-LNP 290
A K+ + G K +D L + +E N+ V +D++ + + P
Sbjct: 84 PEHSAPAAKSKLRESGKREKKTLVLRDRNLCGLNEEKEKASATNDVVCCSDKSDNVEMKP 143
Query: 291 GMSLFSHAPAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIV 350
L + + G GE CP Y G+C +G C Y H + I ++
Sbjct: 144 HSYLEAICSGLEDPVAGSSFGDGEQLCP-YAAAGACHFGDRCLYLHGDVCEIC--GLQVL 200
Query: 351 HP 352
HP
Sbjct: 201 HP 202
Score = 68 (29.0 bits), Expect = 4.1e-05, Sum P(3) = 4.1e-05
Identities = 15/54 (27%), Positives = 23/54 (42%)
Query: 392 YPQRPGQMECDYYMK-TGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPR 444
+ Q G+ C Y+ + G C FG KC + H P + +L+ G R
Sbjct: 317 FKQGVGKKPCKYFEQGKGTCPFGGKCLYFHAYPDGTRAEPEKPRKQLSSEGTVR 370
Score = 59 (25.8 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 18/78 (23%), Positives = 29/78 (37%)
Query: 398 QMECDYYMKTGVCKFGEKCK-FHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHCPYYMK 456
Q C + + K +C+ + SA QE + + G C Y+ +
Sbjct: 272 QWRCAKQFENPIIKSCPECRVISEFVIPSAYWVEDQEKKNELIEAFKQGVGKKPCKYFEQ 331
Query: 457 -TGTCKYGATCKFDHPPP 473
GTC +G C + H P
Sbjct: 332 GKGTCPFGGKCLYFHAYP 349
Score = 52 (23.4 bits), Expect = 4.1e-05, Sum P(3) = 4.1e-05
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 138 CAYYMQTRTCKFGDTCKFDHPI 159
C YY+Q C+ G C F H +
Sbjct: 8 CRYYVQG-VCREGSKCLFSHDL 28
>UNIPROTKB|Q9H000 [details] [associations]
symbol:MKRN2 "Probable E3 ubiquitin-protein ligase
makorin-2" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005622 "intracellular"
evidence=IDA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 UniPathway:UPA00143
Prosite:PS00518 EMBL:CH471055 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0003676 GO:GO:0016567 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5084
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224
HOGENOM:HOG000252976 KO:K15687 HOVERGEN:HBG066965 CTD:23609
OrthoDB:EOG4229K2 InterPro:IPR026293 PANTHER:PTHR11224:SF17
EMBL:AF302084 EMBL:AF277170 EMBL:AF277164 EMBL:AF277165
EMBL:AF277166 EMBL:AF277167 EMBL:AF277168 EMBL:AF277169
EMBL:AF161555 EMBL:AK091318 EMBL:AC018500 EMBL:BC001799
EMBL:BC015715 EMBL:AL834512 IPI:IPI00396406 RefSeq:NP_054879.3
UniGene:Hs.591666 ProteinModelPortal:Q9H000 SMR:Q9H000
IntAct:Q9H000 STRING:Q9H000 PhosphoSite:Q9H000 DMDM:45645205
PRIDE:Q9H000 DNASU:23609 Ensembl:ENST00000170447 GeneID:23609
KEGG:hsa:23609 UCSC:uc003bxd.3 GeneCards:GC03P012598 HGNC:HGNC:7113
HPA:HPA037559 HPA:HPA037560 MIM:608426 neXtProt:NX_Q9H000
PharmGKB:PA30832 InParanoid:Q9H000 OMA:KGYCAYG ChiTaRS:MKRN2
GenomeRNAi:23609 NextBio:46312 ArrayExpress:Q9H000 Bgee:Q9H000
CleanEx:HS_MKRN2 Genevestigator:Q9H000 GermOnline:ENSG00000075975
Uniprot:Q9H000
Length = 416
Score = 70 (29.7 bits), Expect = 7.0e-05, Sum P(4) = 7.0e-05
Identities = 15/54 (27%), Positives = 23/54 (42%)
Query: 392 YPQRPGQMECDYYMK-TGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPR 444
+ Q G+ C Y+ + G C FG KC + H P + +L+ G R
Sbjct: 318 FKQGMGKKACKYFEQGKGTCPFGSKCLYRHAYPDGRLAEPEKPRKQLSSQGTVR 371
Score = 68 (29.0 bits), Expect = 7.0e-05, Sum P(4) = 7.0e-05
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 237 CAFYLKNGTCKFGATCKFDHPKDFQLPSVGQENGIGEQNESV 278
C +Y K G C +G C++DH + PS +G SV
Sbjct: 37 CKYYQK-GYCAYGTRCRYDHTR----PSAAAGGAVGTMAHSV 73
Score = 60 (26.2 bits), Expect = 7.0e-05, Sum P(4) = 7.0e-05
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 317 CPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHP 352
CP Y G C++G C Y H E I ++HP
Sbjct: 171 CP-YAAAGECRFGDACVYLHGEVCEIC--RLQVLHP 203
Score = 49 (22.3 bits), Expect = 7.0e-05, Sum P(4) = 7.0e-05
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 190 CPYFLKTQRCKFGSKCKFNH 209
C YF+ C+ GS+C F+H
Sbjct: 8 CRYFMHGV-CREGSQCLFSH 26
Score = 47 (21.6 bits), Expect = 0.00011, Sum P(4) = 0.00011
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 138 CAYYMQTRTCKFGDTCKFDHPI 159
C Y+M C+ G C F H +
Sbjct: 8 CRYFMHG-VCREGSQCLFSHDL 28
>UNIPROTKB|F1LVT2 [details] [associations]
symbol:F1LVT2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0000289 "nuclear-transcribed mRNA poly(A)
tail shortening" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0017091 "AU-rich element binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005737 GO:GO:0008270 GO:GO:0017091 GO:GO:0000289
GeneTree:ENSGT00530000063262 IPI:IPI00362311
Ensembl:ENSRNOT00000050601 Uniprot:F1LVT2
Length = 490
Score = 123 (48.4 bits), Expect = 0.00022, P = 0.00022
Identities = 64/231 (27%), Positives = 101/231 (43%)
Query: 176 ASSESLPERPGEPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEP 235
+SS++ ER C F + C++G+KC+F H +L +S P+ +EP
Sbjct: 133 SSSQATSERYKTELCRPFEENGTCRYGNKCQFAHGYHEL--------RTLSRHPKYKTEP 184
Query: 236 PCAFYLKNGTCKFGATCKFDHPKDFQLP----SVGQE----NGIGEQNESV--------I 279
C + G C +G+ C F H + QLP SV +E NG+ E + V +
Sbjct: 185 -CRTFHSIGYCPYGSRCHFIHNQPEQLPMLPGSVSEEPSSFNGLDEHHLGVNNGERQPRL 243
Query: 280 KTDETTGLLNPGMSLFSHAPAMLHN---SKGLPIRPGELDCPFYLKTGSC-KYGSTCRYN 335
++D +G L+ G S AP L+ + G + PG + TG+ G+
Sbjct: 244 QSDSPSGFLS-GNSQALQAPLQLNQQAMNSGAALTPGAA-----MATGAALALGAAMATG 297
Query: 336 HPERTAINPPAAAIVHPLITSPAASLGISVVSP-AASLYQ--TIDPRLAQA 383
AI P AA + + + AA + +P AA+L I PR+A A
Sbjct: 298 ----AAITPGAAMALGAAMATGAALAPRAAFAPRAAALAPGAAIPPRVAFA 344
>UNIPROTKB|F1MF12 [details] [associations]
symbol:MKRN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR026290
PANTHER:PTHR11224 GeneTree:ENSGT00390000014093 OMA:YQRGCCA
EMBL:DAAA02011734 EMBL:DAAA02011733 IPI:IPI00701209
Ensembl:ENSBTAT00000010932 ArrayExpress:F1MF12 Uniprot:F1MF12
Length = 480
Score = 92 (37.4 bits), Expect = 0.00034, Sum P(3) = 0.00034
Identities = 48/194 (24%), Positives = 73/194 (37%)
Query: 320 YLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAASLGISVVSPAASLYQTIDPR 379
Y + G C YG CRY H + A A +S AAS +S V P T+D
Sbjct: 92 YFQRGYCIYGDRCRYEH-SKPLKQEEATATDLTAKSSLAASSSLSSVGP------TVDMN 144
Query: 380 LAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTL 439
+ +A S + G D+ C P S+A+ P Q +V T
Sbjct: 145 MGEAE---SRNSNFATVGAGSEDWVNAIEFVPGQPYCGRTAP---SSAEAPLQGSV--TK 196
Query: 440 AGLPRREGAVH-----CPYYMKTGTCKYGATCKFDHPPPGEVMAISALDGTSTAVGEE-- 492
+ + AV CPY G C+YG C + H ++ + L A +
Sbjct: 197 EDAEKEQSAVETKKQLCPY-AAVGECRYGENCAYLHGDACDMCGLQVLHPVDAAQRSQHI 255
Query: 493 ---VKGDEKESEVA 503
++ EK+ E++
Sbjct: 256 KSCIEAHEKDMELS 269
Score = 57 (25.1 bits), Expect = 0.00034, Sum P(3) = 0.00034
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 178 SESLPERPGEPDCPYFLKTQRCKFGSKCKFNHPK 211
S L + P C YF + C +G +C++ H K
Sbjct: 78 SHDLSDSPYGVVCKYFQRGY-CIYGDRCRYEHSK 110
Score = 56 (24.8 bits), Expect = 0.00034, Sum P(3) = 0.00034
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 138 CAYYMQTRTCKFGDTCKFDHPI 159
C Y+M CK GD C++ H +
Sbjct: 61 CWYFMHG-VCKEGDNCRYSHDL 81
Score = 54 (24.1 bits), Expect = 0.00067, Sum P(3) = 0.00067
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 228 LPERPSEPPCAFYLKNGTCKFGATCKFDHPK 258
L + P C Y + G C +G C+++H K
Sbjct: 81 LSDSPYGVVCK-YFQRGYCIYGDRCRYEHSK 110
>ZFIN|ZDB-GENE-990806-20 [details] [associations]
symbol:cth1 "cth1" species:7955 "Danio rerio"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 ZFIN:ZDB-GENE-990806-20 GO:GO:0008270
GO:GO:0003676 HSSP:P22893 GeneTree:ENSGT00530000063262
EMBL:AL954709 EMBL:BC107984 EMBL:AJ249490 IPI:IPI00509714
RefSeq:NP_571014.1 UniGene:Dr.621 SMR:Q9PU62 STRING:Q9PU62
Ensembl:ENSDART00000101601 GeneID:30114 KEGG:dre:30114 CTD:30114
HOGENOM:HOG000153347 HOVERGEN:HBG078993 InParanoid:Q9PU62 KO:K13056
OMA:FTFSSQH NextBio:20806593 Uniprot:Q9PU62
Length = 319
Score = 116 (45.9 bits), Expect = 0.00061, P = 0.00061
Identities = 44/169 (26%), Positives = 68/169 (40%)
Query: 317 CPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAASLGISVVSPAASLYQTI 376
C Y +TG+CKY C++ H ++ P+ HP + L + + +Y T
Sbjct: 65 CSRYAETGTCKYAERCQFAHGLHD-LHVPSR---HPKYKT---ELCRTYHTAGYCVYGT- 116
Query: 377 DPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETV- 435
L L + P+R + C + GVC FG +C F H S + +E
Sbjct: 117 -RCLFVHNLKEQRPIRPRRRN-VPCRTFRAFGVCPFGNRCHFLHVEGGSESDGAEEEQTW 174
Query: 436 ---KLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHPPPGEVMAISA 481
+ PR GA+ C + G C YG C+F H P + +A
Sbjct: 175 QPPSQSQEWKPR--GAL-CRTFSAFGFCLYGTRCRFQHGLPNTIKGHNA 220
>UNIPROTKB|F1MRH0 [details] [associations]
symbol:MKRN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 Pfam:PF00097
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR026290 PANTHER:PTHR11224 GeneTree:ENSGT00390000014093
EMBL:DAAA02011734 EMBL:DAAA02011733 IPI:IPI00701209
Ensembl:ENSBTAT00000040303 ArrayExpress:F1MRH0 Uniprot:F1MRH0
Length = 340
Score = 92 (37.4 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 48/194 (24%), Positives = 73/194 (37%)
Query: 320 YLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAASLGISVVSPAASLYQTIDPR 379
Y + G C YG CRY H + A A +S AAS +S V P T+D
Sbjct: 104 YFQRGYCIYGDRCRYEH-SKPLKQEEATATDLTAKSSLAASSSLSSVGP------TVDMN 156
Query: 380 LAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTL 439
+ +A S + G D+ C P S+A+ P Q +V T
Sbjct: 157 MGEAE---SRNSNFATVGAGSEDWVNAIEFVPGQPYCGRTAP---SSAEAPLQGSV--TK 208
Query: 440 AGLPRREGAVH-----CPYYMKTGTCKYGATCKFDHPPPGEVMAISALDGTSTAVGEE-- 492
+ + AV CPY G C+YG C + H ++ + L A +
Sbjct: 209 EDAEKEQSAVETKKQLCPY-AAVGECRYGENCAYLHGDACDMCGLQVLHPVDAAQRSQHI 267
Query: 493 ---VKGDEKESEVA 503
++ EK+ E++
Sbjct: 268 KSCIEAHEKDMELS 281
Score = 54 (24.1 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 228 LPERPSEPPCAFYLKNGTCKFGATCKFDHPK 258
L + P C Y + G C +G C+++H K
Sbjct: 93 LSDSPYGVVCK-YFQRGYCIYGDRCRYEHSK 122
Score = 50 (22.7 bits), Expect = 0.00065, Sum P(3) = 0.00065
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 140 YYMQTRTCKFGDTCKFDHPI 159
Y+M CK GD C++ H +
Sbjct: 75 YFMHG-VCKEGDNCRYSHDL 93
>MGI|MGI:1914277 [details] [associations]
symbol:Mkrn2 "makorin, ring finger protein, 2" species:10090
"Mus musculus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=ISO;ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 UniPathway:UPA00143
MGI:MGI:1914277 Prosite:PS00518 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0003676 GO:GO:0016567 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:CH466523 eggNOG:COG5084
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224
HOGENOM:HOG000252976 KO:K15687 GeneTree:ENSGT00390000014093
HOVERGEN:HBG066965 CTD:23609 OrthoDB:EOG4229K2 InterPro:IPR026293
PANTHER:PTHR11224:SF17 OMA:KGYCAYG EMBL:AF277171 EMBL:AK011295
EMBL:AK077926 EMBL:BC025547 IPI:IPI00620251 RefSeq:NP_075779.2
UniGene:Mm.101316 ProteinModelPortal:Q9ERV1 SMR:Q9ERV1
PhosphoSite:Q9ERV1 PRIDE:Q9ERV1 Ensembl:ENSMUST00000000449
GeneID:67027 KEGG:mmu:67027 InParanoid:Q6GTY9 NextBio:323348
Bgee:Q9ERV1 CleanEx:MM_MKRN2 Genevestigator:Q9ERV1
GermOnline:ENSMUSG00000000439 Uniprot:Q9ERV1
Length = 416
Score = 91 (37.1 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 33/94 (35%), Positives = 46/94 (48%)
Query: 286 GLLNPGMS-LFSHAPAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINP 344
G+ G LFSH L NSK P + C +Y K G C YG+ CRY+H + P
Sbjct: 14 GVCREGSQCLFSHD---LANSK-----PSTI-CKYYQK-GYCAYGARCRYDHTK-----P 58
Query: 345 PAAA--IVHPLITSPAASLGISVVSPAASLYQTI 376
PAAA V P +P+ S G+ P+ + ++
Sbjct: 59 PAAAGGAVGPA-PNPSPSSGLHSPHPSPDIATSV 91
Score = 70 (29.7 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 15/54 (27%), Positives = 23/54 (42%)
Query: 392 YPQRPGQMECDYYMK-TGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPR 444
+ Q G+ C Y+ + G C FG KC + H P + +L+ G R
Sbjct: 318 FKQGMGKKACKYFEQGKGTCPFGSKCLYRHAYPDGRLAEPEKPRKQLSSEGTVR 371
Score = 55 (24.4 bits), Expect = 0.00097, Sum P(3) = 0.00097
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 447 GAVHCPYYMK-TGTCKYGATCKFDHPPP 473
G C Y+ + GTC +G+ C + H P
Sbjct: 323 GKKACKYFEQGKGTCPFGSKCLYRHAYP 350
Score = 52 (23.4 bits), Expect = 0.00097, Sum P(3) = 0.00097
Identities = 18/55 (32%), Positives = 24/55 (43%)
Query: 367 SPAASLYQTIDP-RLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHH 420
SP + +D R L S S Y P Q+ C Y G C+FG+ C + H
Sbjct: 139 SPEMKPHSYLDAIRTGLDDLEASSS-YSNEP-QL-CPY-AAAGECRFGDACVYLH 189
>RGD|1310618 [details] [associations]
symbol:Mkrn2 "makorin, ring finger protein, 2" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 RGD:1310618
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5084
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224
HOGENOM:HOG000252976 KO:K15687 GeneTree:ENSGT00390000014093
HOVERGEN:HBG066965 CTD:23609 OrthoDB:EOG4229K2 InterPro:IPR026293
PANTHER:PTHR11224:SF17 OMA:KGYCAYG EMBL:BC083870 IPI:IPI00372043
RefSeq:NP_001008315.1 UniGene:Rn.129070 Ensembl:ENSRNOT00000013146
GeneID:297525 KEGG:rno:297525 UCSC:RGD:1310618 InParanoid:Q5XI23
NextBio:642384 Genevestigator:Q5XI23 Uniprot:Q5XI23
Length = 417
Score = 91 (37.1 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 33/94 (35%), Positives = 46/94 (48%)
Query: 286 GLLNPGMS-LFSHAPAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINP 344
G+ G LFSH L NSK P + C +Y K G C YG+ CRY+H + P
Sbjct: 14 GVCREGSQCLFSHD---LANSK-----PSTI-CKYYQK-GYCAYGARCRYDHTK-----P 58
Query: 345 PAAA--IVHPLITSPAASLGISVVSPAASLYQTI 376
PAAA V P P+ S G+ P++ + ++
Sbjct: 59 PAAAGGAVGPA-PHPSPSSGLHSPHPSSDIATSV 91
Score = 70 (29.7 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 15/54 (27%), Positives = 23/54 (42%)
Query: 392 YPQRPGQMECDYYMK-TGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPR 444
+ Q G+ C Y+ + G C FG KC + H P + +L+ G R
Sbjct: 319 FKQGMGKKACKYFEQGKGTCPFGSKCLYRHAYPDGRLAEPEKPRKQLSSEGTVR 372
>UNIPROTKB|F1M3I4 [details] [associations]
symbol:Mkrn2 "Protein Mkrn2" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 RGD:1310618
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR026290 PANTHER:PTHR11224 InterPro:IPR026293
PANTHER:PTHR11224:SF17 IPI:IPI00566412 Ensembl:ENSRNOT00000044916
ArrayExpress:F1M3I4 Uniprot:F1M3I4
Length = 417
Score = 91 (37.1 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 33/94 (35%), Positives = 46/94 (48%)
Query: 286 GLLNPGMS-LFSHAPAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINP 344
G+ G LFSH L NSK P + C +Y K G C YG+ CRY+H + P
Sbjct: 14 GVCREGSQCLFSHD---LANSK-----PSTI-CKYYQK-GYCAYGARCRYDHTK-----P 58
Query: 345 PAAA--IVHPLITSPAASLGISVVSPAASLYQTI 376
PAAA V P P+ S G+ P++ + ++
Sbjct: 59 PAAAGGAVGPA-PHPSPSSGLHSPHPSSDIATSV 91
Score = 70 (29.7 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 15/54 (27%), Positives = 23/54 (42%)
Query: 392 YPQRPGQMECDYYMK-TGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPR 444
+ Q G+ C Y+ + G C FG KC + H P + +L+ G R
Sbjct: 319 FKQGMGKKACKYFEQGKGTCPFGSKCLYRHAYPDGRLAEPEKPRKQLSSEGTVR 372
>UNIPROTKB|P26651 [details] [associations]
symbol:ZFP36 "Tristetraprolin" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA
poly(A) tail shortening" evidence=IEA] [GO:0007243 "intracellular
protein kinase cascade" evidence=IEA] [GO:0035925 "mRNA 3'-UTR
AU-rich region binding" evidence=IEA] [GO:0045638 "negative
regulation of myeloid cell differentiation" evidence=IEA]
[GO:0050728 "negative regulation of inflammatory response"
evidence=IEA] [GO:0050779 "RNA destabilization" evidence=IEA]
[GO:0017091 "AU-rich element binding" evidence=IMP;IDA] [GO:0006402
"mRNA catabolic process" evidence=IDA] [GO:0060213 "positive
regulation of nuclear-transcribed mRNA poly(A) tail shortening"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0019957 "C-C chemokine binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019901 "protein kinase binding"
evidence=IPI] [GO:0006950 "response to stress" evidence=IDA]
[GO:0010494 "cytoplasmic stress granule" evidence=IDA] [GO:0071889
"14-3-3 protein binding" evidence=IDA] [GO:0032680 "regulation of
tumor necrosis factor production" evidence=IDA] [GO:0070935
"3'-UTR-mediated mRNA stabilization" evidence=IDA] [GO:1900153
"positive regulation of nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=ISS] [GO:0035278 "negative
regulation of translation involved in gene silencing by miRNA"
evidence=ISS] [GO:0003727 "single-stranded RNA binding"
evidence=TAS] [GO:0003729 "mRNA binding" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA;TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0005829
GO:GO:0005634 GO:GO:0010467 GO:GO:0006950 GO:GO:0046872
GO:GO:0003677 GO:GO:0050728 GO:GO:0008270 GO:GO:0003729
GO:GO:0003727 GO:GO:0007243 GO:GO:0017091 GO:GO:0000122
GO:GO:0006402 GO:GO:0071889 GO:GO:0010494 GO:GO:0060213
eggNOG:COG5063 GO:GO:0000289 GO:GO:0045638 GO:GO:0070935
GO:GO:0032680 GO:GO:0050779 HOGENOM:HOG000233479 HOVERGEN:HBG008483
CTD:7538 KO:K15308 EMBL:M92843 EMBL:M92844 EMBL:M63625
EMBL:AK314042 EMBL:AY771351 EMBL:BC009693 IPI:IPI00000893
PIR:S34427 RefSeq:NP_003398.2 UniGene:Hs.534052
ProteinModelPortal:P26651 SMR:P26651 DIP:DIP-29845N IntAct:P26651
MINT:MINT-1171915 STRING:P26651 PhosphoSite:P26651 DMDM:136471
PRIDE:P26651 DNASU:7538 Ensembl:ENST00000248673 GeneID:7538
KEGG:hsa:7538 UCSC:uc002olh.1 GeneCards:GC19P039897 HGNC:HGNC:12862
HPA:HPA006009 MIM:190700 neXtProt:NX_P26651 PharmGKB:PA37451
InParanoid:P26651 OMA:RRLPIFN OrthoDB:EOG4S4PH4 PhylomeDB:P26651
ChiTaRS:ZFP36 GenomeRNAi:7538 NextBio:29497 Bgee:P26651
CleanEx:HS_ZFP36 Genevestigator:P26651 GermOnline:ENSG00000128016
Uniprot:P26651
Length = 326
Score = 115 (45.5 bits), Expect = 0.00083, P = 0.00083
Identities = 56/222 (25%), Positives = 89/222 (40%)
Query: 99 HTSIGQSEAWYSTNSLAKRPRIESASNLPVYPQRPGEKDCAYYMQTRTCKFGDTCKFDHP 158
H S W S+ + P S S V + PG ++ R+C + P
Sbjct: 23 HGGTESSPGWGSSGPWSLSPSDSSPSG--VTSRLPGRSTSL--VEGRSCGWVPPPPGFAP 78
Query: 159 IWVPEGGIPDWKEVPVIASSESL-PERPGEPDCPYFLKTQRCKFGSKCKFNHPKDKLIGS 217
+ P G P+ P ++ S P R C F ++ RC++G+KC+F H +G
Sbjct: 79 L-APRLG-PELSPSPTSPTATSTTPSRYKTELCRTFSESGRCRYGAKCQFAHG----LGE 132
Query: 218 SDSGNGDVSALPERPSEPPCAFYLKNGTCKFGATCKFDHPKDFQLPSVGQENGIGEQ-NE 276
N P+ +E FYL+ G C +G+ C F H L + G + + +
Sbjct: 133 LRQANRH----PKYKTELCHKFYLQ-GRCPYGSRCHFIHNPSEDLAAPGHPPVLRQSISF 187
Query: 277 SVIKTDETT-----GLLNPGMSLFSHAPAMLHNSKG-LPIRP 312
S + + T GL P +S S +P+ G LP+ P
Sbjct: 188 SGLPSGRRTSPPPPGLAGPSLSSSSFSPSSSPPPPGDLPLSP 229
>UNIPROTKB|H7C4T5 [details] [associations]
symbol:MBNL1 "Muscleblind-like protein 1" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 EMBL:AC026347 EMBL:AC106722 HGNC:HGNC:6923
ChiTaRS:MBNL1 ProteinModelPortal:H7C4T5 Ensembl:ENST00000464596
Uniprot:H7C4T5
Length = 329
Score = 90 (36.7 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 38/134 (28%), Positives = 57/134 (42%)
Query: 341 AINPPAAAIVHPLITSPAASLGISVVSPAASLYQTIDPRLAQATLGVSPSLYPQRPGQME 400
A N AAA +P + + SL + + P A + T +P + + + R ++E
Sbjct: 124 ATNASAAAF-NPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTDRLE 182
Query: 401 -CDYYMKTGVCKFGEK-CKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKTG 458
C Y + G C GE C+F HP D + T + TV + C Y+K G
Sbjct: 183 VCREYQR-GNCNRGENDCRFAHPADSTMIDT-NDNTVTV-------------CMDYIK-G 226
Query: 459 TCKYGATCKFDHPP 472
C CK+ HPP
Sbjct: 227 RCSR-EKCKYFHPP 239
Score = 68 (29.0 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 36/132 (27%), Positives = 52/132 (39%)
Query: 190 CPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCAFYLKNGTCKFG 249
C F + + ++CKF HP S NG V A C LK G C
Sbjct: 18 CREFQRGTCSRPDTECKFAHPSK----SCQVENGRVIA---------CFDSLK-GRCS-R 62
Query: 250 ATCKFDHPKDF---QLPSVGQENGIGEQNESVIKTD-ETTGLLNPGMSL-----FSHAPA 300
CK+ HP QL G+ N I ++N +++ + + PG L FS AP+
Sbjct: 63 ENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSVAPS 122
Query: 301 MLHNSKGLPIRP 312
+ N+ P
Sbjct: 123 LATNASAAAFNP 134
>ZFIN|ZDB-GENE-020213-1 [details] [associations]
symbol:mkrn1 "makorin, ring finger protein, 1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000571
PROSITE:PS50089 PROSITE:PS50103 SMART:SM00184 SMART:SM00356
UniPathway:UPA00143 Prosite:PS00518 ZFIN:ZDB-GENE-020213-1
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0003676
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5084
InterPro:IPR017907 HSSP:P47974 InterPro:IPR026290 PANTHER:PTHR11224
HOGENOM:HOG000252976 KO:K15687 EMBL:CR792454 EMBL:CT826375
EMBL:BC095243 EMBL:AF277173 IPI:IPI00639757 RefSeq:NP_694510.1
UniGene:Dr.78561 ProteinModelPortal:Q4VBT5 STRING:Q4VBT5
Ensembl:ENSDART00000061070 GeneID:170782 KEGG:dre:170782 CTD:23608
GeneTree:ENSGT00390000014093 HOVERGEN:HBG066965 InParanoid:Q4VBT5
OMA:YQRGCCA OrthoDB:EOG45DWPM NextBio:20797100 Bgee:Q4VBT5
Uniprot:Q4VBT5
Length = 439
Score = 65 (27.9 bits), Expect = 0.00090, Sum P(4) = 0.00090
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 317 CPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITS 356
CP Y G C+YG C Y H + + ++HP TS
Sbjct: 169 CP-YAAVGECRYGLNCAYLHGD--VCDMCGLQVLHPSDTS 205
Score = 61 (26.5 bits), Expect = 0.00090, Sum P(4) = 0.00090
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 237 CAFYLKNGTCKFGATCKFDHPK 258
C F+ K G C FG C+++H K
Sbjct: 53 CKFFQK-GCCAFGDRCRYEHTK 73
Score = 58 (25.5 bits), Expect = 0.00090, Sum P(4) = 0.00090
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 447 GAVHCPYYMK-TGTCKYGATCKFDHP-PPGEV 476
G C Y+ + GTC +GA C + H P G +
Sbjct: 321 GTKPCRYFDEGRGTCPFGANCFYKHAFPDGRL 352
Score = 53 (23.7 bits), Expect = 0.00090, Sum P(4) = 0.00090
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 138 CAYYMQTRTCKFGDTCKFDHPI 159
C Y+M CK G+ C++ H +
Sbjct: 24 CRYFMHG-LCKEGENCRYSHDL 44
>UNIPROTKB|C9JP00 [details] [associations]
symbol:MBNL1 "Muscleblind-like protein 1" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 EMBL:AC026347 EMBL:AC106722 HGNC:HGNC:6923
HOGENOM:HOG000230928 ChiTaRS:MBNL1 IPI:IPI00945690
ProteinModelPortal:C9JP00 SMR:C9JP00 STRING:C9JP00
Ensembl:ENST00000498502 ArrayExpress:C9JP00 Bgee:C9JP00
Uniprot:C9JP00
Length = 348
Score = 90 (36.7 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 38/134 (28%), Positives = 57/134 (42%)
Query: 341 AINPPAAAIVHPLITSPAASLGISVVSPAASLYQTIDPRLAQATLGVSPSLYPQRPGQME 400
A N AAA +P + + SL + + P A + T +P + + + R ++E
Sbjct: 125 ATNASAAAF-NPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTDRLE 183
Query: 401 -CDYYMKTGVCKFGEK-CKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKTG 458
C Y + G C GE C+F HP D + T + TV + C Y+K G
Sbjct: 184 VCREYQR-GNCNRGENDCRFAHPADSTMIDT-NDNTVTV-------------CMDYIK-G 227
Query: 459 TCKYGATCKFDHPP 472
C CK+ HPP
Sbjct: 228 RCSR-EKCKYFHPP 240
Score = 68 (29.0 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 36/132 (27%), Positives = 52/132 (39%)
Query: 190 CPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCAFYLKNGTCKFG 249
C F + + ++CKF HP S NG V A C LK G C
Sbjct: 19 CREFQRGTCSRPDTECKFAHPSK----SCQVENGRVIA---------CFDSLK-GRCS-R 63
Query: 250 ATCKFDHPKDF---QLPSVGQENGIGEQNESVIKTD-ETTGLLNPGMSL-----FSHAPA 300
CK+ HP QL G+ N I ++N +++ + + PG L FS AP+
Sbjct: 64 ENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSVAPS 123
Query: 301 MLHNSKGLPIRP 312
+ N+ P
Sbjct: 124 LATNASAAAFNP 135
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.133 0.417 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 508 494 0.00083 119 3 11 23 0.45 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 27
No. of states in DFA: 616 (65 KB)
Total size of DFA: 314 KB (2156 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 44.71u 0.12s 44.83t Elapsed: 00:00:02
Total cpu time: 44.72u 0.12s 44.84t Elapsed: 00:00:02
Start: Mon May 20 23:55:26 2013 End: Mon May 20 23:55:28 2013