BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040937
(508 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q941Q3|C3H37_ARATH Zinc finger CCCH domain-containing protein 37 OS=Arabidopsis
thaliana GN=HUA1 PE=1 SV=1
Length = 524
Score = 556 bits (1434), Expect = e-157, Method: Compositional matrix adjust.
Identities = 268/416 (64%), Positives = 319/416 (76%), Gaps = 26/416 (6%)
Query: 66 SSQAQQPWPPGVDPTDHLKRPSEALYHPTLLGTHTSIGQSEAWYSTNSLAKRPRIESASN 125
++ A +P PPGV KR SEALY+PTLLG H +IGQ+EAWY+T+ KRP++ES S+
Sbjct: 114 AASAVEPLPPGV------KRTSEALYYPTLLGAHNTIGQTEAWYTTDYFTKRPKLESTSH 167
Query: 126 LPVYPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERP 185
LP+YPQR GEKDC +YMQTRTCKFG++C+FDHPIWVPEGGIPDWKE PV+ +E PERP
Sbjct: 168 LPIYPQRAGEKDCTHYMQTRTCKFGESCRFDHPIWVPEGGIPDWKEAPVVP-NEEYPERP 226
Query: 186 GEPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCAFYLKNGT 245
GEPDCPY++KTQRCK+GSKCKFNHP+++ S ++ + +LPERPSEP C FY+K G
Sbjct: 227 GEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQD----SLPERPSEPMCTFYMKTGK 282
Query: 246 CKFGATCKFDHPKDFQLPSVGQENGIGEQNESVIKTDETTGLLNPGMSLFSHAPAMLHNS 305
CKFG +CKF HPKD QLPS Q+ G SV T E NP ++ PA+ HNS
Sbjct: 283 CKFGLSCKFHHPKDIQLPSSSQDIG-----SSVGLTSEPDATNNPHVTF---TPALYHNS 334
Query: 306 KGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAASLGISV 365
KGLP+R GE+DCPFYLKTGSCKYG+TCRYNHPERTA P AA + + L++S A+L + +
Sbjct: 335 KGLPVRSGEVDCPFYLKTGSCKYGATCRYNHPERTAFIPQAAGVNYSLVSSNTANLNLGL 394
Query: 366 VSPAASLYQTIDPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRS 425
V+PA S YQT L Q TLGV + YPQRPGQ ECDYYMKTG CKFGE+CKFHHP DR
Sbjct: 395 VTPATSFYQT----LTQPTLGVISATYPQRPGQSECDYYMKTGECKFGERCKFHHPADRL 450
Query: 426 AAKT---PSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHPPPGEVMA 478
+A T P Q VKL+LAG PRREGA++CPYYMKTGTCKYGATCKFDHPPPGEVMA
Sbjct: 451 SAMTKQAPQQPNVKLSLAGYPRREGALNCPYYMKTGTCKYGATCKFDHPPPGEVMA 506
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 107/228 (46%), Gaps = 50/228 (21%)
Query: 265 VGQENGIGEQNESVIKTDETTGLLNPGMSLFSHAPAMLHNSKGLPIRPGELDCPFYLKTG 324
+G N IG Q E+ TD T P + SH P P R GE DC Y++T
Sbjct: 138 LGAHNTIG-QTEAWYTTDYFTK--RPKLESTSHLPI-------YPQRAGEKDCTHYMQTR 187
Query: 325 SCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAASLGISVVSPAASLYQTIDPRLAQAT 384
+CK+G +CR++HP I P I P +A
Sbjct: 188 TCKFGESCRFDHP----IWVPEGGI----------------------------PDWKEAP 215
Query: 385 LGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPR 444
+ V YP+RPG+ +C YY+KT CK+G KCKF+HP + +A +Q++ LP
Sbjct: 216 V-VPNEEYPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQDS-------LPE 267
Query: 445 REGAVHCPYYMKTGTCKYGATCKFDHPPPGEVMAISALDGTSTAVGEE 492
R C +YMKTG CK+G +CKF HP ++ + S G+S + E
Sbjct: 268 RPSEPMCTFYMKTGKCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSE 315
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 128 VYPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVP-VIASSESLPERPG 186
YPQRPG+ +C YYM+T CKFG+ CKF HP + P V S P R G
Sbjct: 416 TYPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREG 475
Query: 187 EPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVS 226
+CPY++KT CK+G+ CKF+HP + + + D +
Sbjct: 476 ALNCPYYMKTGTCKYGATCKFDHPPPGEVMAKTTSEADAA 515
>sp|Q5ZDJ6|C3H8_ORYSJ Zinc finger CCCH domain-containing protein 8 OS=Oryza sativa subsp.
japonica GN=Os01g0616400 PE=2 SV=2
Length = 462
Score = 441 bits (1134), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/419 (52%), Positives = 284/419 (67%), Gaps = 32/419 (7%)
Query: 84 KRPSEALYHPTLLGTHTSIGQSEAWYSTNSLAKRPRIESASNLPVYPQRPGEKDCAYYMQ 143
+R LYH ++G+H+++ Q EA YS+N++ KRPR+ES+ LP+YPQRPGEKDCA+YM
Sbjct: 59 RRSMGVLYHQPIMGSHSTVEQIEALYSSNTMTKRPRLESS--LPIYPQRPGEKDCAFYMM 116
Query: 144 TRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPGEPDCPYFLKTQRCKFGS 203
TRTCKFG +CKFDHP WVPEGGIP+WKE ES PE+ GEPDCP+F+KT +CKFGS
Sbjct: 117 TRTCKFGGSCKFDHPQWVPEGGIPNWKEQ-AANVEESYPEQEGEPDCPFFMKTGKCKFGS 175
Query: 204 KCKFNHPKDKLIGSSDSGN-------GDVSALPERPSEPPCAFYLKNGTCKFGATCKFDH 256
KCKFNHPK+K + + SGN D S LP RPSEP C+FY K G CKF A CKF+H
Sbjct: 176 KCKFNHPKEK-VNALASGNTNDKHLIADSSILPVRPSEPLCSFYAKTGKCKFRAMCKFNH 234
Query: 257 PKDFQLPSVGQENGIGEQNESVIKTDETTGLLNPGMSLFSH-----APAMLHNSKGLPIR 311
PKD ++PS E ES + + T + + S+ + A A NSKGLP+R
Sbjct: 235 PKDIEIPSSQNE------PESAVTVEGETDIGSAADSVSAKMQTPVAAAQEFNSKGLPMR 288
Query: 312 PGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAASLGISVVSPAAS 371
PGE+DCPFY+K GSCK+GSTCR+NHP+R +N P + ++ +P + L ++ +A+
Sbjct: 289 PGEVDCPFYMKMGSCKFGSTCRFNHPDRLVLNFP-LPLGQTILPTPESML----LNSSAN 343
Query: 372 LYQTIDPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAK--- 428
Q D A +G P YPQRPG CD+YMKTG CKF ++CKFHHPIDRSA
Sbjct: 344 FMQGFDFHAAHMPVGPGPVTYPQRPGATVCDFYMKTGFCKFADRCKFHHPIDRSAPDPSA 403
Query: 429 --TPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHPPPGEVMAISALDGT 485
P++E+V+LTLAGLPRRE AV C +YMKTG CK+G CKFDHPPP E +A + G+
Sbjct: 404 NWEPAEESVQLTLAGLPRREDAVVCAFYMKTGVCKFGMQCKFDHPPPQEAIAKVSNSGS 462
>sp|Q84W91|C3H32_ARATH Zinc finger CCCH domain-containing protein 32 OS=Arabidopsis
thaliana GN=At2g47850 PE=2 SV=2
Length = 468
Score = 203 bits (516), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 132/363 (36%), Positives = 178/363 (49%), Gaps = 109/363 (30%)
Query: 178 SESLPERPGEPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPC 237
S+S PERPG PDC Y+++T C +G++C++NHP+D+ S ++ PER EPPC
Sbjct: 39 SDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDR--ASVEATVRATGQYPERFGEPPC 96
Query: 238 AFYLKNGTCKFGATCKFDHPKDFQLPSVGQENGIGEQNESVIKTDETTGLLNPGMSLFSH 297
FYLK GTCKFGA+CKF HPK N G S+ SH
Sbjct: 97 QFYLKTGTCKFGASCKFHHPK------------------------------NAGGSM-SH 125
Query: 298 APAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPE--RTAINPPAAAI--VHPL 353
P ++ G P+R G+ +C +YLKTG CK+G TC+++HP+ T + PP A+ +P
Sbjct: 126 VPLNIY---GYPVREGDNECSYYLKTGQCKFGITCKFHHPQPAGTTVPPPPASAPQFYPS 182
Query: 354 ITS--------PAASLGISV---------------------------------VSP---- 368
+ S P++SL ++ VSP
Sbjct: 183 VQSLMPDQYGGPSSSLRVARTLLPGSYMQGAYGPMLLTPGVVPIPGWSPYSAPVSPALSP 242
Query: 369 -------AASLYQTIDPRLAQATL-GVSPSL------------YPQRPGQMECDYYMKTG 408
A SLY +L GV PSL +P+RPG+ EC YY+KTG
Sbjct: 243 GAQHAVGATSLYGVTQLTSTTPSLPGVYPSLSSPTGVIQKEQAFPERPGEPECQYYLKTG 302
Query: 409 VCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKF 468
CKFG CKFHHP DR P + L+ GLP R G C +Y++ G CK+G+TCKF
Sbjct: 303 DCKFGTSCKFHHPRDR----VPPRANCVLSPIGLPLRPGVQRCTFYVQNGFCKFGSTCKF 358
Query: 469 DHP 471
DHP
Sbjct: 359 DHP 361
Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 134/321 (41%), Gaps = 72/321 (22%)
Query: 129 YPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPGEP 188
YP+R GE C +Y++T TCKFG +CKF HP GG VP+ + P R G+
Sbjct: 87 YPERFGEPPCQFYLKTGTCKFGASCKFHHPKNA--GG--SMSHVPL--NIYGYPVREGDN 140
Query: 189 DCPYFLKTQRCKFGSKCKFNHPK-------------------------DKLIGSSDSGNG 223
+C Y+LKT +CKFG CKF+HP+ D+ G S S
Sbjct: 141 ECSYYLKTGQCKFGITCKFHHPQPAGTTVPPPPASAPQFYPSVQSLMPDQYGGPSSSLRV 200
Query: 224 DVSALPERPSEPPCA-FYLKNGTCKFGATCKFDHPKDFQLPSVGQENGIGEQN-ESVIKT 281
+ LP + L G + P L S G ++ +G + V +
Sbjct: 201 ARTLLPGSYMQGAYGPMLLTPGVVPIPGWSPYSAPVSPAL-SPGAQHAVGATSLYGVTQL 259
Query: 282 DETTGLLNPGMSLFSHAPAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTA 341
TT L S ++ + P RPGE +C +YLKTG CK+G++C+++HP
Sbjct: 260 TSTTPSLPGVYPSLSSPTGVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRV 319
Query: 342 INPPAAAIVHPLITSPAASLGISVVSPAASLYQTIDPRLAQATLGVSPSLYPQRPGQMEC 401
PP A V +SP P RPG C
Sbjct: 320 --PPRANCV------------------------------------LSPIGLPLRPGVQRC 341
Query: 402 DYYMKTGVCKFGEKCKFHHPI 422
+Y++ G CKFG CKF HP+
Sbjct: 342 TFYVQNGFCKFGSTCKFDHPM 362
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 80/169 (47%), Gaps = 43/169 (25%)
Query: 305 SKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAASLGIS 364
S P RPG DC +Y++TG C YG+ CRYNHP
Sbjct: 39 SDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPR-------------------------- 72
Query: 365 VVSPAASLYQTIDPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDR 424
D +AT+ + YP+R G+ C +Y+KTG CKFG CKFHHP +
Sbjct: 73 ------------DRASVEATVRAT-GQYPERFGEPPCQFYLKTGTCKFGASCKFHHPKNA 119
Query: 425 SAAKTPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHPPP 473
S V L + G P REG C YY+KTG CK+G TCKF HP P
Sbjct: 120 GG----SMSHVPLNIYGYPVREGDNECSYYLKTGQCKFGITCKFHHPQP 164
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 59/87 (67%), Gaps = 5/87 (5%)
Query: 385 LGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPR 444
LG+ YP+RPG +C YYM+TGVC +G +C+++HP DR++ + TV+ T P
Sbjct: 35 LGLGSDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASV----EATVRAT-GQYPE 89
Query: 445 REGAVHCPYYMKTGTCKYGATCKFDHP 471
R G C +Y+KTGTCK+GA+CKF HP
Sbjct: 90 RFGEPPCQFYLKTGTCKFGASCKFHHP 116
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 68/137 (49%), Gaps = 36/137 (26%)
Query: 227 ALPERPSEPPCAFYLKNGTCKFGATCKFDHPKDFQLPSVGQENGIGEQNESVIKTDETTG 286
A PERP EP C +YLK G CKFG +CKF HP+D P
Sbjct: 285 AFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPP-------------------RANC 325
Query: 287 LLNPGMSLFSHAPAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTA-INPP 345
+L+P GLP+RPG C FY++ G CK+GSTC+++HP T NP
Sbjct: 326 VLSP---------------IGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHPMGTIRYNPS 370
Query: 346 AAAIVH-PLITSPAASL 361
A+++ P+ P +SL
Sbjct: 371 ASSLADAPVAPYPVSSL 387
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 128 VYPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPGE 187
+P+RPGE +C YY++T CKFG +CKF H P +P + S LP RPG
Sbjct: 285 AFPERPGEPECQYYLKTGDCKFGTSCKFHH----PRDRVPPRAN--CVLSPIGLPLRPGV 338
Query: 188 PDCPYFLKTQRCKFGSKCKFNHPKDKL 214
C ++++ CKFGS CKF+HP +
Sbjct: 339 QRCTFYVQNGFCKFGSTCKFDHPMGTI 365
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 125 NLPVYPQRPGEKDCAYYMQTRTCKFGDTCKFDHP 158
N+ YP R G+ +C+YY++T CKFG TCKF HP
Sbjct: 129 NIYGYPVREGDNECSYYLKTGQCKFGITCKFHHP 162
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 25/51 (49%)
Query: 421 PIDRSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHP 471
P D S + L P R GA C YYM+TG C YG C+++HP
Sbjct: 21 PADADTGLQESMWRLGLGSDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHP 71
>sp|Q8L7N8|C3H57_ARATH Zinc finger CCCH domain-containing protein 57 OS=Arabidopsis
thaliana GN=ZFN3 PE=2 SV=2
Length = 375
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/319 (37%), Positives = 165/319 (51%), Gaps = 68/319 (21%)
Query: 180 SLPERPGEPDCPYFLKTQRCKFGSKCKFNHPKD-KLIGSSDSGNGDVSALPERPSEPPCA 238
S PER GEPDC Y+++T C+FGS C+FNHP D KL+ ++ G+ PER +P C
Sbjct: 38 SYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIKGE---YPERIGQPECE 94
Query: 239 FYLKNGTCKFGATCKFDHPKDFQLPSVGQENGIGEQNESVIKTDETTGLLNPGMSLFSHA 298
FYLK GTCKFG TCKF HP+ N++ I + +L+
Sbjct: 95 FYLKTGTCKFGVTCKFHHPR----------------NKAGIDGSVSVNVLS--------- 129
Query: 299 PAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPA 358
P+RP E DC ++L+ G CK+G TC++NHP+ + N + P+ ++
Sbjct: 130 ---------YPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQ 180
Query: 359 ASLGISVVSPAASLYQTIDPRL---------AQATLGVS-----------------PSLY 392
+ G S + + + PRL +Q L S +++
Sbjct: 181 SLTGQPSYSWSRTSFVANPPRLQDPSGFASGSQGGLFSSGFHSGNSVPLGFYALPRENVF 240
Query: 393 PQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHCP 452
P+RPGQ EC +YMKTG CKFG CKFHHP DR +TP + V L+ GLP R G C
Sbjct: 241 PERPGQPECQFYMKTGDCKFGTVCKFHHPRDR---QTPPPDCV-LSSVGLPLRPGEPLCV 296
Query: 453 YYMKTGTCKYGATCKFDHP 471
+Y + G CK+G +CKFDHP
Sbjct: 297 FYSRYGICKFGPSCKFDHP 315
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/351 (32%), Positives = 168/351 (47%), Gaps = 88/351 (25%)
Query: 129 YPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSE-SLPERPGE 187
YP+R GE DCAYY++T C+FG TC+F+HP D K V A + PER G+
Sbjct: 39 YPERHGEPDCAYYIRTGLCRFGSTCRFNHP--------HDRKLVIATARIKGEYPERIGQ 90
Query: 188 PDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCAFYLKNGTCK 247
P+C ++LKT CKFG CKF+HP++K G S + +V + P RP+E C+++L+ G CK
Sbjct: 91 PECEFYLKTGTCKFGVTCKFHHPRNK-AGIDGSVSVNVLSYPLRPNEDDCSYFLRIGQCK 149
Query: 248 FGATCKFDHPK----DFQLPSVGQ------ENGIGE-----------------QNESVIK 280
FG TCKF+HP+ + + G ++ G+ Q+ S
Sbjct: 150 FGGTCKFNHPQTQSTNLMVSVRGSPVYSALQSLTGQPSYSWSRTSFVANPPRLQDPSGFA 209
Query: 281 TDETTGLLNPGMSLFSHAPA---MLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHP 337
+ GL + G + P L P RPG+ +C FY+KTG CK+G+ C+++HP
Sbjct: 210 SGSQGGLFSSGFHSGNSVPLGFYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHP 269
Query: 338 ERTAINPPAAAIVHPLITSPAASLGISVVSPAASLYQTIDPRLAQATLGVSPSLYPQRPG 397
PP + +S+G+ P RPG
Sbjct: 270 RDRQTPPPDCVL---------SSVGL-----------------------------PLRPG 291
Query: 398 QMECDYYMKTGVCKFGEKCKFHHPI------DRSAAKTPS----QETVKLT 438
+ C +Y + G+CKFG CKF HP+ + +A+ +PS QET T
Sbjct: 292 EPLCVFYSRYGICKFGPSCKFDHPMRVFTYNNNTASPSPSSSLHQETAITT 342
Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 99/227 (43%), Gaps = 45/227 (19%)
Query: 125 NLPVYPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPER 184
N+ YP RP E DC+Y+++ CKFG TCKF+HP + + PV ++ +SL +
Sbjct: 126 NVLSYPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRGSPVYSALQSLTGQ 185
Query: 185 PGEPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDV-----------SALPERPS 233
P + F + SS +G+ + PERP
Sbjct: 186 PSYSWSRTSFVANPPRLQDPSGFASGSQGGLFSSGFHSGNSVPLGFYALPRENVFPERPG 245
Query: 234 EPPCAFYLKNGTCKFGATCKFDHPKDFQLPSVGQENGIGEQNESVIKTDETTGLLNPGMS 293
+P C FY+K G CKFG CKF HP+D Q P
Sbjct: 246 QPECQFYMKTGDCKFGTVCKFHHPRDRQTP------------------------------ 275
Query: 294 LFSHAPAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERT 340
P + +S GLP+RPGE C FY + G CK+G +C+++HP R
Sbjct: 276 ----PPDCVLSSVGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMRV 318
Score = 85.5 bits (210), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 6/88 (6%)
Query: 384 TLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLP 443
T+GV S YP+R G+ +C YY++TG+C+FG C+F+HP DR ++ P
Sbjct: 32 TMGVDGS-YPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATAR-----IKGEYP 85
Query: 444 RREGAVHCPYYMKTGTCKYGATCKFDHP 471
R G C +Y+KTGTCK+G TCKF HP
Sbjct: 86 ERIGQPECEFYLKTGTCKFGVTCKFHHP 113
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 27/39 (69%)
Query: 443 PRREGAVHCPYYMKTGTCKYGATCKFDHPPPGEVMAISA 481
P R G C YY++TG C++G+TC+F+HP +++ +A
Sbjct: 40 PERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATA 78
>sp|Q9SWF9|ZFNL_PEA Zinc finger CCCH domain-containing protein ZFN-like OS=Pisum
sativum PE=2 SV=1
Length = 417
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/357 (35%), Positives = 181/357 (50%), Gaps = 47/357 (13%)
Query: 129 YPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSE-SLPERPGE 187
YP+ PGE DC+YY++T C+FG TC+F+HP P+ K A + PER G+
Sbjct: 27 YPEHPGEPDCSYYIRTGLCRFGATCRFNHP--------PNRKLAIATARMKGEFPERLGQ 78
Query: 188 PDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCAFYLKNGTCK 247
P+C Y+LKT CKFG+ C+F+HPKDK G + ++ P RP+E A+YL+ G CK
Sbjct: 79 PECQYYLKTGTCKFGATCRFHHPKDK-AGVAGRVALNILGYPLRPNESERAYYLRTGQCK 137
Query: 248 FGATCKFDHPKDFQL----------PSVGQENGIGEQNESVIKTDETTGLLNPG---MSL 294
FG TCKF HP+ + P+V G+Q+ + T+ ++ P
Sbjct: 138 FGNTCKFHHPQPSNMVLSMRGSTVYPTVQSPTTPGQQSYAAGITNWSSSSYVPSPRWQGP 197
Query: 295 FSHAPAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLI 354
S+AP +L G + P G YG P++T N H
Sbjct: 198 SSYAPLILPQ--------GVVSVP-----GWSTYGGQMGSESPQQTMRNDQTYGTSH--- 241
Query: 355 TSPAASLGISVVSPAASLYQTIDPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGE 414
L + + A S Y++ + L +++P+RP Q EC +YMKTG CKFG
Sbjct: 242 ---QGELENAGLQGAYSQYRSGSVPVGFYALQRD-NIFPERPDQPECQFYMKTGDCKFGA 297
Query: 415 KCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHP 471
C+FHHP +R + P+ + V L+ GLP R G C +Y + G CK+G +CKFDHP
Sbjct: 298 VCRFHHPRER---QIPAPDCV-LSPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHP 350
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 149/330 (45%), Gaps = 74/330 (22%)
Query: 175 IASSESL-----PERPGEPDCPYFLKTQRCKFGSKCKFNHPKD-KLIGSSDSGNGDVSAL 228
+ SSE++ PE PGEPDC Y+++T C+FG+ C+FNHP + KL ++ G+
Sbjct: 16 LRSSETMESGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIATARMKGE---F 72
Query: 229 PERPSEPPCAFYLKNGTCKFGATCKFDHPKDFQLPSVGQENGIGEQNESVIKTDETTGLL 288
PER +P C +YLK GTCKFGATC+F HPKD + G+
Sbjct: 73 PERLGQPECQYYLKTGTCKFGATCRFHHPKD--------KAGV----------------- 107
Query: 289 NPGMSLFSHAPAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPE-RTAINPPAA 347
A + N G P+RP E + +YL+TG CK+G+TC+++HP+ +
Sbjct: 108 ---------AGRVALNILGYPLRPNESERAYYLRTGQCKFGNTCKFHHPQPSNMVLSMRG 158
Query: 348 AIVHPLITSPAA----SLGISVVSPAASLYQTIDPRLAQATLGVSPSLYPQRPGQMECDY 403
+ V+P + SP S + + ++S Y PR Q +P + PQ G +
Sbjct: 159 STVYPTVQSPTTPGQQSYAAGITNWSSSSY-VPSPRW-QGPSSYAPLILPQ--GVVSVPG 214
Query: 404 YMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAG---------------------- 441
+ G E + D++ + E L G
Sbjct: 215 WSTYGGQMGSESPQQTMRNDQTYGTSHQGELENAGLQGAYSQYRSGSVPVGFYALQRDNI 274
Query: 442 LPRREGAVHCPYYMKTGTCKYGATCKFDHP 471
P R C +YMKTG CK+GA C+F HP
Sbjct: 275 FPERPDQPECQFYMKTGDCKFGAVCRFHHP 304
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 145/334 (43%), Gaps = 76/334 (22%)
Query: 120 IESASNLPVYPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSE 179
I +A +P+R G+ +C YY++T TCKFG TC+F HP + G+ + ++
Sbjct: 63 IATARMKGEFPERLGQPECQYYLKTGTCKFGATCRFHHP--KDKAGVAGRVALNILG--- 117
Query: 180 SLPERPGEPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSAL--PERPSEPPC 237
P RP E + Y+L+T +CKFG+ CKF+HP+ + S G+ + P P +
Sbjct: 118 -YPLRPNESERAYYLRTGQCKFGNTCKFHHPQPSNMVLSMRGSTVYPTVQSPTTPGQQSY 176
Query: 238 AFYLKN-GTCKFGATCKFDHPKDFQ---LP----------SVGQENGIGEQNESVIKTDE 283
A + N + + + ++ P + LP + G + G E + ++ D+
Sbjct: 177 AAGITNWSSSSYVPSPRWQGPSSYAPLILPQGVVSVPGWSTYGGQMG-SESPQQTMRNDQ 235
Query: 284 TTG------LLNPGMS-LFSHAPA--------MLHNSKGLPIRPGELDCPFYLKTGSCKY 328
T G L N G+ +S + L P RP + +C FY+KTG CK+
Sbjct: 236 TYGTSHQGELENAGLQGAYSQYRSGSVPVGFYALQRDNIFPERPDQPECQFYMKTGDCKF 295
Query: 329 GSTCRYNHPERTAINPPAAAIVHPLITSPAASLGISVVSPAASLYQTIDPRLAQATLGVS 388
G+ CR++HP I P + S
Sbjct: 296 GAVCRFHHPRERQIPAPDCVL--------------------------------------S 317
Query: 389 PSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPI 422
P P RPG+ C +Y + G+CKFG CKF HP+
Sbjct: 318 PIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPM 351
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 80/169 (47%), Gaps = 43/169 (25%)
Query: 309 PIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAASLGISVVSP 368
P PGE DC +Y++TG C++G+TCR+NHP P L I+
Sbjct: 28 PEHPGEPDCSYYIRTGLCRFGATCRFNHP-------------------PNRKLAIATARM 68
Query: 369 AASLYQTIDPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAK 428
+P+R GQ EC YY+KTG CKFG C+FHHP D++
Sbjct: 69 KGE--------------------FPERLGQPECQYYLKTGTCKFGATCRFHHPKDKAGVA 108
Query: 429 TPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHPPPGEVM 477
V L + G P R YY++TG CK+G TCKF HP P ++
Sbjct: 109 G----RVALNILGYPLRPNESERAYYLRTGQCKFGNTCKFHHPQPSNMV 153
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 130 PQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWV 161
P RPGE C +Y + CKFG +CKFDHP+ +
Sbjct: 322 PLRPGEPLCVFYSRYGICKFGPSCKFDHPMGI 353
>sp|Q5NAV3|C3H5_ORYSJ Zinc finger CCCH domain-containing protein 5 OS=Oryza sativa subsp.
japonica GN=Os01g0257400 PE=2 SV=1
Length = 466
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/355 (32%), Positives = 169/355 (47%), Gaps = 45/355 (12%)
Query: 130 PQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPGEPD 189
P+RPGE DC YY++T C +G+ C+++HP + + S PERPG+P
Sbjct: 49 PERPGEADCVYYLRTGACGYGENCRYNHPRDRAAAAVLNGGGK--TTHSAEYPERPGQPV 106
Query: 190 CPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCAFYLKNGTCKFG 249
C Y++K CKFGS CK++HP++ GS + + S P R E C +Y+K G CKFG
Sbjct: 107 CEYYMKNGTCKFGSNCKYDHPRE---GSVQAVMLNSSGYPLRSGEKDCTYYVKTGHCKFG 163
Query: 250 ATCKFDHPK--------DFQLPSVGQENGIGEQNESVIKTDETTGLLNPGMSLFSHAPAM 301
+TCKF HP+ + P Q + + + PG L P M
Sbjct: 164 STCKFHHPEIGGVSETPNMYPPVQPQPISSSHPYQHLAGWQMGRPPVLPGSFLSGSYPPM 223
Query: 302 LHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAASL 361
+ S +P++ +N P + +N A+A H + +
Sbjct: 224 MLPSTVVPMQ---------------------GWN-PYISPVNQVASAGGHQTVQA-GPFY 260
Query: 362 GISVVSPAASL-----YQTIDPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKC 416
G+S P+A++ Y + ++ +P RPGQ EC YY+KTG CKFG C
Sbjct: 261 GLSHQGPSAAVTYGSQYAPLSSSTMPSSSSKQEPAFPARPGQPECQYYLKTGSCKFGSAC 320
Query: 417 KFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHP 471
K+HHP + K+ L+ GLP R G+ C YY + G CK+G TCKFDHP
Sbjct: 321 KYHHPQYLNTPKS----NCMLSPLGLPLRPGSQPCAYYTQHGFCKFGPTCKFDHP 371
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 150/321 (46%), Gaps = 73/321 (22%)
Query: 181 LPERPGEPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVS---ALPERPSEPPC 237
LPERPGE DC Y+L+T C +G C++NHP+D+ + +G G + PERP +P C
Sbjct: 48 LPERPGEADCVYYLRTGACGYGENCRYNHPRDRAAAAVLNGGGKTTHSAEYPERPGQPVC 107
Query: 238 AFYLKNGTCKFGATCKFDHPKDFQLPSVGQENGIGEQNESVIKTDETTGLLNPGMSLFSH 297
+Y+KNGTCKFG+ CK+DHP++ + +V
Sbjct: 108 EYYMKNGTCKFGSNCKYDHPREGSVQAV-------------------------------- 135
Query: 298 APAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAIN----------PPAA 347
+ NS G P+R GE DC +Y+KTG CK+GSTC+++HPE ++ P
Sbjct: 136 ----MLNSSGYPLRSGEKDCTYYVKTGHCKFGSTCKFHHPEIGGVSETPNMYPPVQPQPI 191
Query: 348 AIVHPLITSPAASLGISVVSPAASLYQTIDPRLAQATL----GVSPSLYPQRPGQMECDY 403
+ HP +G V P + L + P + +T+ G +P + P +
Sbjct: 192 SSSHPYQHLAGWQMGRPPVLPGSFLSGSYPPMMLPSTVVPMQGWNPYISP-------VNQ 244
Query: 404 YMKTGVCKFGEKCKFHHPIDR--SAAKTPSQETVKLTLA-----------GLPRREGAVH 450
G + + F+ + SAA T + L+ + P R G
Sbjct: 245 VASAGGHQTVQAGPFYGLSHQGPSAAVTYGSQYAPLSSSTMPSSSSKQEPAFPARPGQPE 304
Query: 451 CPYYMKTGTCKYGATCKFDHP 471
C YY+KTG+CK+G+ CK+ HP
Sbjct: 305 CQYYLKTGSCKFGSACKYHHP 325
Score = 132 bits (332), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 141/343 (41%), Gaps = 75/343 (21%)
Query: 129 YPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPGEP 188
YP+RPG+ C YYM+ TCKFG CK+DHP EG + V+ +S P R GE
Sbjct: 98 YPERPGQPVCEYYMKNGTCKFGSNCKYDHPR---EGSVQA-----VMLNSSGYPLRSGEK 149
Query: 189 DCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEP---PCAFYLKNGT 245
DC Y++KT CKFGS CKF+HP+ + + + V P S P + +
Sbjct: 150 DCTYYVKTGHCKFGSTCKFHHPEIGGVSETPNMYPPVQPQPISSSHPYQHLAGWQMGRPP 209
Query: 246 CKFGATCKFDHPKDFQLPSV-----GQENGIGEQNESVIKTDETTGLLNPGMSLFSHAP- 299
G+ +P LPS G I N+ T P L P
Sbjct: 210 VLPGSFLSGSYP-PMMLPSTVVPMQGWNPYISPVNQVASAGGHQTVQAGPFYGLSHQGPS 268
Query: 300 -AMLHNSK------------------GLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERT 340
A+ + S+ P RPG+ +C +YLKTGSCK+GS C+Y+HP+
Sbjct: 269 AAVTYGSQYAPLSSSTMPSSSSKQEPAFPARPGQPECQYYLKTGSCKFGSACKYHHPQY- 327
Query: 341 AINPPAAAIVHPLITSPAASLGISVVSPAASLYQTIDPRLAQATLGVSPSLYPQRPGQME 400
+N P + + +SP P RPG
Sbjct: 328 -LNTPKSNCM------------------------------------LSPLGLPLRPGSQP 350
Query: 401 CDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLP 443
C YY + G CKFG CKF HP+ + + L +A P
Sbjct: 351 CAYYTQHGFCKFGPTCKFDHPMGTLSYSPSASSITDLPIAPYP 393
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 88/169 (52%), Gaps = 40/169 (23%)
Query: 308 LPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAASLGISVVS 367
LP RPGE DC +YL+TG+C YG CRYNHP A AAA+++ G +
Sbjct: 48 LPERPGEADCVYYLRTGACGYGENCRYNHPRDRA----AAAVLN----------GGGKTT 93
Query: 368 PAASLYQTIDPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAA 427
+A YP+RPGQ C+YYMK G CKFG CK+ HP + S
Sbjct: 94 HSAE--------------------YPERPGQPVCEYYMKNGTCKFGSNCKYDHPREGSV- 132
Query: 428 KTPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHPPPGEV 476
+ V L +G P R G C YY+KTG CK+G+TCKF HP G V
Sbjct: 133 -----QAVMLNSSGYPLRSGEKDCTYYVKTGHCKFGSTCKFHHPEIGGV 176
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 58/93 (62%)
Query: 387 VSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRRE 446
V+ P+RPG+ +C YY++TG C +GE C+++HP DR+AA + A P R
Sbjct: 43 VAAGRLPERPGEADCVYYLRTGACGYGENCRYNHPRDRAAAAVLNGGGKTTHSAEYPERP 102
Query: 447 GAVHCPYYMKTGTCKYGATCKFDHPPPGEVMAI 479
G C YYMK GTCK+G+ CK+DHP G V A+
Sbjct: 103 GQPVCEYYMKNGTCKFGSNCKYDHPREGSVQAV 135
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 35/146 (23%)
Query: 227 ALPERPSEPPCAFYLKNGTCKFGATCKFDHPKDFQLPSVGQENGIGEQNESVIKTDETTG 286
A P RP +P C +YLK G+CKFG+ CK+ HP+ + T ++
Sbjct: 295 AFPARPGQPECQYYLKTGSCKFGSACKYHHPQ-------------------YLNTPKSNC 335
Query: 287 LLNPGMSLFSHAPAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPA 346
+L+P GLP+RPG C +Y + G CK+G TC+++HP T P+
Sbjct: 336 MLSP---------------LGLPLRPGSQPCAYYTQHGFCKFGPTCKFDHPMGTLSYSPS 380
Query: 347 AAIVHPLITSP-AASLGISVVSPAAS 371
A+ + L +P + ++ V+P +S
Sbjct: 381 ASSITDLPIAPYPLNYAVAPVAPPSS 406
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 127 PVYPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPG 186
P +P RPG+ +C YY++T +CKFG CK+ HP ++ + + + S LP RPG
Sbjct: 294 PAFPARPGQPECQYYLKTGSCKFGSACKYHHPQYL------NTPKSNCMLSPLGLPLRPG 347
Query: 187 EPDCPYFLKTQRCKFGSKCKFNHPKDKL 214
C Y+ + CKFG CKF+HP L
Sbjct: 348 SQPCAYYTQHGFCKFGPTCKFDHPMGTL 375
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 442 LPRREGAVHCPYYMKTGTCKYGATCKFDHPPPGEVMAISALDGTSTAVGE 491
LP R G C YY++TG C YG C+++HP A+ G +T E
Sbjct: 48 LPERPGEADCVYYLRTGACGYGENCRYNHPRDRAAAAVLNGGGKTTHSAE 97
>sp|Q6NPN3|C3H58_ARATH Zinc finger CCCH domain-containing protein 58 OS=Arabidopsis
thaliana GN=At5g18550 PE=2 SV=1
Length = 465
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 177/353 (50%), Gaps = 39/353 (11%)
Query: 128 VYPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSES----LPE 183
+P+RP E DC YY++T C +G C+F+HP PV+ + PE
Sbjct: 47 TFPERPDEPDCIYYLRTGVCGYGSRCRFNHP----------RNRAPVLGGLRTEAGEFPE 96
Query: 184 RPGEPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDS-GNGDVSALPERPSEPPCAFYLK 242
R G+P C +F++T CKFG+ CK++HP+ G S + + + P RP E C+++++
Sbjct: 97 RMGQPVCQHFMRTGTCKFGASCKYHHPRQGGGGDSVTPVSLNYMGFPLRPGEKECSYFMR 156
Query: 243 NGTCKFGATCKFDH--PKDFQLPSVGQENGIGEQNESVIKTDETTGLLNPGMSLFSHAPA 300
G CKFG+TC++ H P Q PS Q+ + T + + P
Sbjct: 157 TGQCKFGSTCRYHHPVPPGVQAPSQQQQQQLSAGPTMYPSLQSQTVPSSQQYGVVLARPQ 216
Query: 301 MLHNS-KGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAA 359
+L S P G++ L G Y +P + +++ + P + + ++
Sbjct: 217 LLPGSYVQSPYGYGQM----VLPPGMVPYSGW----NPYQASVSAMPSPGTQPSMGT-SS 267
Query: 360 SLGISVVSPAASLYQTIDPRLAQATLGVS--PSLYPQRPGQMECDYYMKTGVCKFGEKCK 417
GI+ +SP+A YQ+ ++ GVS +PQRP Q EC Y+M+TG CKFG C+
Sbjct: 268 VYGITPLSPSAPAYQS-----GPSSTGVSNKEQTFPQRPEQPECQYFMRTGDCKFGTSCR 322
Query: 418 FHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDH 470
FHHP++ + S E L+ GLP R GAV C ++ + G CK+G CKFDH
Sbjct: 323 FHHPMEAA-----SPEASTLSHIGLPLRPGAVPCTHFAQHGICKFGPACKFDH 370
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 145/316 (45%), Gaps = 58/316 (18%)
Query: 179 ESLPERPGEPDCPYFLKTQRCKFGSKCKFNHPKDK--LIGSSDSGNGDVSALPERPSEPP 236
E+ PERP EPDC Y+L+T C +GS+C+FNHP+++ ++G + G+ PER +P
Sbjct: 46 ETFPERPDEPDCIYYLRTGVCGYGSRCRFNHPRNRAPVLGGLRTEAGE---FPERMGQPV 102
Query: 237 CAFYLKNGTCKFGATCKFDHPKDFQLPSVGQENGIGEQNESVIKTDETTGLLNPGMSLFS 296
C +++ GTCKFGA+CK+ HP+ + G G+ S
Sbjct: 103 CQHFMRTGTCKFGASCKYHHPR---------QGGGGD----------------------S 131
Query: 297 HAPAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITS 356
P L N G P+RPGE +C ++++TG CK+GSTCRY+HP + P+ L
Sbjct: 132 VTPVSL-NYMGFPLRPGEKECSYFMRTGQCKFGSTCRYHHPVPPGVQAPSQQQQQQLSAG 190
Query: 357 PAASLGI-SVVSPAASLYQTI--DPRLAQATLGVSPSLYPQ-------------RPGQME 400
P + S P++ Y + P+L + SP Y Q P Q
Sbjct: 191 PTMYPSLQSQTVPSSQQYGVVLARPQLLPGSYVQSPYGYGQMVLPPGMVPYSGWNPYQAS 250
Query: 401 CDYYMKTGVC-KFGEKCKFH-HPIDRSA---AKTPSQETVKLTLAGLPRREGAVHCPYYM 455
G G + P+ SA PS V P+R C Y+M
Sbjct: 251 VSAMPSPGTQPSMGTSSVYGITPLSPSAPAYQSGPSSTGVSNKEQTFPQRPEQPECQYFM 310
Query: 456 KTGTCKYGATCKFDHP 471
+TG CK+G +C+F HP
Sbjct: 311 RTGDCKFGTSCRFHHP 326
Score = 112 bits (279), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 82/183 (44%), Gaps = 40/183 (21%)
Query: 308 LPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAASLGISVVS 367
P RP E DC +YL+TG C YGS CR+NHP A P++
Sbjct: 48 FPERPDEPDCIYYLRTGVCGYGSRCRFNHPRNRA----------PVL------------- 84
Query: 368 PAASLYQTIDPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAA 427
L +P+R GQ C ++M+TG CKFG CK+HHP R
Sbjct: 85 ---------------GGLRTEAGEFPERMGQPVCQHFMRTGTCKFGASCKYHHP--RQGG 127
Query: 428 KTPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHPPPGEVMAISALDGTST 487
S V L G P R G C Y+M+TG CK+G+TC++ HP P V A S
Sbjct: 128 GGDSVTPVSLNYMGFPLRPGEKECSYFMRTGQCKFGSTCRYHHPVPPGVQAPSQQQQQQL 187
Query: 488 AVG 490
+ G
Sbjct: 188 SAG 190
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 14/120 (11%)
Query: 97 GTHTSIGQSEAWYSTNSLAKRPRIES-------ASNLPVYPQRPGEKDCAYYMQTRTCKF 149
GT S+G S + T P +S ++ +PQRP + +C Y+M+T CKF
Sbjct: 258 GTQPSMGTSSVYGITPLSPSAPAYQSGPSSTGVSNKEQTFPQRPEQPECQYFMRTGDCKF 317
Query: 150 GDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPGEPDCPYFLKTQRCKFGSKCKFNH 209
G +C+F HP+ E P+ + I LP RPG C +F + CKFG CKF+H
Sbjct: 318 GTSCRFHHPM---EAASPEASTLSHIG----LPLRPGAVPCTHFAQHGICKFGPACKFDH 370
>sp|Q9SQU4|C3H34_ARATH Zinc finger CCCH domain-containing protein 34 OS=Arabidopsis
thaliana GN=At3g06410 PE=2 SV=2
Length = 462
Score = 171 bits (432), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/356 (31%), Positives = 171/356 (48%), Gaps = 42/356 (11%)
Query: 129 YPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPGEP 188
YP+RP E DC YY++T C +G C+F+HP G + V + +LPER G P
Sbjct: 51 YPERPDEPDCIYYLRTGVCGYGSRCRFNHP--RDRGAVIGG----VRGEAGALPERMGHP 104
Query: 189 DCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSAL-------PERPSEPPCAFYL 241
C +F++T CKFG+ CK++HP+ G G V+ + P RP E C++YL
Sbjct: 105 VCQHFMRTGTCKFGASCKYHHPRQ------GGGGGSVAPVSLSYLGYPLRPGEKECSYYL 158
Query: 242 KNGTCKFGATCKFDHPKDFQLPSVGQENGIGEQNESVIKTDETTGLLNPGMS------LF 295
+ G CKFG TC+F+HP + Q+ + L + + L
Sbjct: 159 RTGQCKFGLTCRFNHPVPLAVQGPPQQPQQQQPQPQPQLQTIYPTLQSQSIPSSQQYGLV 218
Query: 296 SHAPAMLHNSK-GLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLI 354
P+ L S P P P L G Y +P + +++ + P I
Sbjct: 219 LTRPSFLTGSYLQSPYGP-----PMVLPPGMVPYSGW----NPYQASLSAMPSPGTQPSI 269
Query: 355 TSPAASLGISVVSPAASLYQTIDPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGE 414
S ++ G++ +SP+A+ Y + + + +PQRP Q EC Y+M+TG CKFG
Sbjct: 270 GS-SSIYGLTPLSPSATAYTGTYQSVPSSN--STSKEFPQRPDQPECQYFMRTGDCKFGS 326
Query: 415 KCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDH 470
C++HHP+D P + + L+ GLP R G C ++ + G CK+G CKFDH
Sbjct: 327 SCRYHHPVD----AVPPKTGIVLSSIGLPLRPGVAQCTHFAQHGICKFGPACKFDH 378
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 94/166 (56%), Gaps = 37/166 (22%)
Query: 179 ESLPERPGEPDCPYFLKTQRCKFGSKCKFNHPKDK--LIGSSDSGNGDVSALPERPSEPP 236
ES PERP EPDC Y+L+T C +GS+C+FNHP+D+ +IG G+ ALPER P
Sbjct: 49 ESYPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVIGGV---RGEAGALPERMGHPV 105
Query: 237 CAFYLKNGTCKFGATCKFDHPKDFQLPSVGQENGIGEQNESVIKTDETTGLLNPGMSLFS 296
C +++ GTCKFGA+CK+ HP+ Q G G S
Sbjct: 106 CQHFMRTGTCKFGASCKYHHPR--------QGGGGG-----------------------S 134
Query: 297 HAPAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAI 342
AP L + G P+RPGE +C +YL+TG CK+G TCR+NHP A+
Sbjct: 135 VAPVSL-SYLGYPLRPGEKECSYYLRTGQCKFGLTCRFNHPVPLAV 179
Score = 105 bits (262), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 82/169 (48%), Gaps = 42/169 (24%)
Query: 309 PIRPGELDCPFYLKTGSCKYGSTCRYNHP-ERTAINPPAAAIVHPLITSPAASLGISVVS 367
P RP E DC +YL+TG C YGS CR+NHP +R A+ +G V
Sbjct: 52 PERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAV------------------IG-GVRG 92
Query: 368 PAASLYQTIDPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAA 427
A +L P+R G C ++M+TG CKFG CK+HHP R
Sbjct: 93 EAGAL--------------------PERMGHPVCQHFMRTGTCKFGASCKYHHP--RQGG 130
Query: 428 KTPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHPPPGEV 476
S V L+ G P R G C YY++TG CK+G TC+F+HP P V
Sbjct: 131 GGGSVAPVSLSYLGYPLRPGEKECSYYLRTGQCKFGLTCRFNHPVPLAV 179
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 53/80 (66%), Gaps = 4/80 (5%)
Query: 392 YPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHC 451
YP+RP + +C YY++TGVC +G +C+F+HP DR A V+ LP R G C
Sbjct: 51 YPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVIG----GVRGEAGALPERMGHPVC 106
Query: 452 PYYMKTGTCKYGATCKFDHP 471
++M+TGTCK+GA+CK+ HP
Sbjct: 107 QHFMRTGTCKFGASCKYHHP 126
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 74/166 (44%), Gaps = 24/166 (14%)
Query: 58 SFRYSGYLSSQAQQPW--PPGVDPTDHLKRPSEALYHPTLLGTHTSIGQSEAW------- 108
SF YL S P PPG+ P +L GT SIG S +
Sbjct: 223 SFLTGSYLQSPYGPPMVLPPGMVPYSGWNPYQASLSAMPSPGTQPSIGSSSIYGLTPLSP 282
Query: 109 ---YSTNSLAKRPRIESASNLPVYPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWV--PE 163
T + P S S +PQRP + +C Y+M+T CKFG +C++ HP+ P+
Sbjct: 283 SATAYTGTYQSVPSSNSTSK--EFPQRPDQPECQYFMRTGDCKFGSSCRYHHPVDAVPPK 340
Query: 164 GGIPDWKEVPVIASSESLPERPGEPDCPYFLKTQRCKFGSKCKFNH 209
GI + SS LP RPG C +F + CKFG CKF+H
Sbjct: 341 TGI--------VLSSIGLPLRPGVAQCTHFAQHGICKFGPACKFDH 378
Score = 40.0 bits (92), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 442 LPRREGAVHCPYYMKTGTCKYGATCKFDHP----PPGEVMAISAL 482
P+R C Y+M+TG CK+G++C++ HP PP + +S++
Sbjct: 304 FPQRPDQPECQYFMRTGDCKFGSSCRYHHPVDAVPPKTGIVLSSI 348
>sp|Q8GXX7|C3H33_ARATH Zinc finger CCCH domain-containing protein 33 OS=Arabidopsis
thaliana GN=ZFN1 PE=1 SV=1
Length = 397
Score = 169 bits (429), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/415 (29%), Positives = 187/415 (45%), Gaps = 129/415 (31%)
Query: 102 IGQSEAWYSTNSLAKRPRIESASNLPVYPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWV 161
+ Q W +L+ +E+ S YP+RPGE DC+YY++T C+FG TC+F+H
Sbjct: 16 MNQDAMW--QMNLSSDETMETGS----YPERPGEPDCSYYIRTGLCRFGSTCRFNH---- 65
Query: 162 PEGGIPDWKEVPVIASSE---SLPERPGEPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSS 218
P +E+ VIA++ PER G+P+C Y+LKT CKFG CKF+HP++K G +
Sbjct: 66 -----PRDREL-VIATARMRGEYPERIGQPECEYYLKTGTCKFGVTCKFHHPRNK-AGIA 118
Query: 219 DSGNGDVSALPERPSEPPCAFYLKNGTCKFGATCKFDHPK----DFQLPSVGQE------ 268
+ ++ P R +E CA++L+ G CKFG TCKF+HP+ + +P+ GQ+
Sbjct: 119 GRVSLNMLGYPLRSNEVDCAYFLRTGHCKFGGTCKFNHPQPQPTNMMVPTSGQQSYPWSR 178
Query: 269 ------------------------------------------NGIG-EQNESVIKTDETT 285
+G G +QN ++ +ET
Sbjct: 179 ASFIASPRWQDPSSYASLIMPQGVVPVQGWNPYSGQLGSVSPSGTGNDQNYRNLQQNETI 238
Query: 286 ----------GLLNPGMSLFSHAPAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYN 335
NPG S+ L P RPG+ +C FY+KTG CK+G+ C+++
Sbjct: 239 ESGSQSQGSFSGYNPGSSVPLGGYYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFH 298
Query: 336 HPERTAINPPAAAIVHPLITSPAASLGISVVSPAASLYQTIDPRLAQATLGVSPSLYPQR 395
HP PP + +S+G+ P R
Sbjct: 299 HPRDRQAPPPDCLL---------SSIGL-----------------------------PLR 320
Query: 396 PGQMECDYYMKTGVCKFGEKCKFHHPI-----DRSAAKTPSQETVKLTLAGLPRR 445
PG+ C +Y + G+CKFG CKF HP+ D +A++T + V T G RR
Sbjct: 321 PGEPLCVFYTRYGICKFGPSCKFDHPMRVFTYDNTASET---DEVVETSTGKSRR 372
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 84/165 (50%), Gaps = 43/165 (26%)
Query: 309 PIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAASLGISVVSP 368
P RPGE DC +Y++TG C++GSTCR+NHP
Sbjct: 38 PERPGEPDCSYYIRTGLCRFGSTCRFNHPR------------------------------ 67
Query: 369 AASLYQTIDPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAK 428
D L AT + YP+R GQ EC+YY+KTG CKFG CKFHHP +++
Sbjct: 68 --------DRELVIATARMR-GEYPERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGIA 118
Query: 429 TPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHPPP 473
V L + G P R V C Y+++TG CK+G TCKF+HP P
Sbjct: 119 G----RVSLNMLGYPLRSNEVDCAYFLRTGHCKFGGTCKFNHPQP 159
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 65/105 (61%), Gaps = 9/105 (8%)
Query: 390 SLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAV 449
+++P+RPGQ EC +YMKTG CKFG CKFHHP DR A P + + L+ GLP R G
Sbjct: 269 NVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQA---PPPDCL-LSSIGLPLRPGEP 324
Query: 450 HCPYYMKTGTCKYGATCKFDHPPPGEVMAISALDGTSTAVGEEVK 494
C +Y + G CK+G +CKFDHP M + D T++ E V+
Sbjct: 325 LCVFYTRYGICKFGPSCKFDHP-----MRVFTYDNTASETDEVVE 364
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 51/80 (63%), Gaps = 5/80 (6%)
Query: 392 YPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHC 451
YP+RPG+ +C YY++TG+C+FG C+F+HP DR ++ P R G C
Sbjct: 37 YPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATAR-----MRGEYPERIGQPEC 91
Query: 452 PYYMKTGTCKYGATCKFDHP 471
YY+KTGTCK+G TCKF HP
Sbjct: 92 EYYLKTGTCKFGVTCKFHHP 111
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 65/141 (46%), Gaps = 35/141 (24%)
Query: 226 SALPERPSEPPCAFYLKNGTCKFGATCKFDHPKDFQLPSVGQENGIGEQNESVIKTDETT 285
+ PERP +P C FY+K G CKFG CKF HP+D Q P
Sbjct: 269 NVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAP---------------------- 306
Query: 286 GLLNPGMSLFSHAPAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPP 345
P L +S GLP+RPGE C FY + G CK+G +C+++HP R
Sbjct: 307 ------------PPDCLLSSIGLPLRPGEPLCVFYTRYGICKFGPSCKFDHPMRVFTYDN 354
Query: 346 AAAIVHPLI-TSPAASLGISV 365
A+ ++ TS S +SV
Sbjct: 355 TASETDEVVETSTGKSRRLSV 375
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 443 PRREGAVHCPYYMKTGTCKYGATCKFDHPPPGEVMAISA 481
P R G C YY++TG C++G+TC+F+HP E++ +A
Sbjct: 38 PERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATA 76
>sp|Q5RJC5|C3H67_ARATH Zinc finger CCCH domain-containing protein 67 OS=Arabidopsis
thaliana GN=At5g63260 PE=2 SV=2
Length = 435
Score = 165 bits (418), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 121/377 (32%), Positives = 176/377 (46%), Gaps = 40/377 (10%)
Query: 126 LPVYPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERP 185
+ VYP RP +DC++YM+T +CK+G +CKF+HP+ + +E + + E P
Sbjct: 95 MMVYPVRPDSEDCSFYMRTGSCKYGSSCKFNHPV---RRKLQIGRER--VRERDEDVENP 149
Query: 186 GEPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCAFYLKNGT 245
+C Y+ +T CK+G C+F+H K+ +S + LP RP E C FY++NG+
Sbjct: 150 KLMECKYYFRTGGCKYGESCRFSHMKEHNSPAS-VPELNFLGLPIRPGEKECPFYMRNGS 208
Query: 246 CKFGATCKFDHPKDFQLPSVGQENGIGEQNESVIKTDETTGLLNPGMSLFSHAPAMLHNS 305
CKFG+ CKF+HP IG + + + N G S AP+ ++
Sbjct: 209 CKFGSDCKFNHP---------DPTAIGGVDSPLYRG-------NNGGSFSPKAPSQASST 252
Query: 306 KGLPIR--PGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAASLGI 363
R G PF G T P+ + N A+ +P SP A
Sbjct: 253 SWSSTRHMNGTGTAPFIPSMFPHSRGVT-----PQASDWNGYQASSAYPPERSPLAPSSY 307
Query: 364 SVVSPAASLYQTIDPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPID 423
V + SL +T +Q +S +P+RP Q EC YY+KTG CKF KCK+HHP +
Sbjct: 308 QVNN---SLAETSS--FSQYQHQMSVEEFPERPDQPECTYYLKTGDCKFKYKCKYHHPKN 362
Query: 424 RSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHPPPGEVMAISALD 483
R P Q GLP R C +Y + G CK+G C+FDH P S+
Sbjct: 363 R----LPKQAAFSFNDKGLPLRPDQSMCTHYSRYGICKFGPACRFDHSIPPTFSPSSSQT 418
Query: 484 GTSTAVGEEVKGDEKES 500
+ VG G+E +S
Sbjct: 419 VEARQVG--ANGNEDDS 433
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 425 SAAKTPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHP 471
S K + + K + P R + C +YM+TG+CKYG++CKF+HP
Sbjct: 81 SDQKEEEEGSEKRMMMVYPVRPDSEDCSFYMRTGSCKYGSSCKFNHP 127
>sp|Q94AD9|C3H3_ARATH Zinc finger CCCH domain-containing protein 3 OS=Arabidopsis
thaliana GN=At1g04990 PE=2 SV=1
Length = 404
Score = 165 bits (417), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 148/344 (43%), Gaps = 103/344 (29%)
Query: 129 YPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPGEP 188
YP RPGE+DC +Y++T C +G +C+++HP +P+ V E LPER G+P
Sbjct: 44 YPDRPGERDCQFYLRTGLCGYGSSCRYNHPTHLPQD---------VAYYKEELPERIGQP 94
Query: 189 DCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCAFYLKNGTCKF 248
DC YFLKT CK+G CK++HPKD+ + +V LP R E PC +YL+ GTC+F
Sbjct: 95 DCEYFLKTGACKYGPTCKYHHPKDR--NGAQPVMFNVIGLPMRLGEKPCPYYLRTGTCRF 152
Query: 249 GATCKFDHPKDFQLPSVGQENGIGE-----------------------------QNESVI 279
G CKF HP+ P G G Q+ I
Sbjct: 153 GVACKFHHPQ----PDNGHSTAYGMSSFPAADLRYASGLTMMSTYGTLPRPQVPQSYVPI 208
Query: 280 KTDETTGLLNP-GMSLFSHAPAMLHNSKGLPIRPG--------------------ELDCP 318
+ G L P G + + A ++N K P G + +C
Sbjct: 209 LVSPSQGFLPPQGWAPYMAASNSMYNVKNQPYYSGSSASMAMAVALNRGLSESSDQPECR 268
Query: 319 FYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAASLGISVVSPAASLYQTIDP 378
F++ TG+CKYG C+Y+HP G+ + P SL
Sbjct: 269 FFMNTGTCKYGDDCKYSHP------------------------GVRISQPPPSL------ 298
Query: 379 RLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPI 422
++P + P RPGQ C + G CKFG CKF HP+
Sbjct: 299 --------INPFVLPARPGQPACGNFRSYGFCKFGPNCKFDHPM 334
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 155/352 (44%), Gaps = 104/352 (29%)
Query: 182 PERPGEPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVS----ALPERPSEPPC 237
P+RPGE DC ++L+T C +GS C++NHP DV+ LPER +P C
Sbjct: 45 PDRPGERDCQFYLRTGLCGYGSSCRYNHPTHL--------PQDVAYYKEELPERIGQPDC 96
Query: 238 AFYLKNGTCKFGATCKFDHPKDFQLPSVGQENGIGEQNESVIKTDETTGLLNPGMSLFSH 297
++LK G CK+G TCK+ HPKD NG
Sbjct: 97 EYFLKTGACKYGPTCKYHHPKD--------RNG--------------------------- 121
Query: 298 APAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSP 357
A ++ N GLP+R GE CP+YL+TG+C++G C+++HP+ + + + + P
Sbjct: 122 AQPVMFNVIGLPMRLGEKPCPYYLRTGTCRFGVACKFHHPQPDN----GHSTAYGMSSFP 177
Query: 358 AASL----GISVVS-----PAASLYQTIDPRLAQATLGVSP------------SLY---- 392
AA L G++++S P + Q+ P L + G P S+Y
Sbjct: 178 AADLRYASGLTMMSTYGTLPRPQVPQSYVPILVSPSQGFLPPQGWAPYMAASNSMYNVKN 237
Query: 393 ---------------------PQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPS 431
+ Q EC ++M TG CK+G+ CK+ HP R + PS
Sbjct: 238 QPYYSGSSASMAMAVALNRGLSESSDQPECRFFMNTGTCKYGDDCKYSHPGVRISQPPPS 297
Query: 432 QETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHPP---PGEVMAIS 480
+ LP R G C + G CK+G CKFDHP PG MA S
Sbjct: 298 L----INPFVLPARPGQPACGNFRSYGFCKFGPNCKFDHPMLPYPGLTMATS 345
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 88/182 (48%), Gaps = 54/182 (29%)
Query: 309 PIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAASLGISVVSP 368
P RPGE DC FYL+TG C YGS+CRYNHP
Sbjct: 45 PDRPGERDCQFYLRTGLCGYGSSCRYNHPTH----------------------------- 75
Query: 369 AASLYQTIDPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAK 428
L Q L P+R GQ +C+Y++KTG CK+G CK+HHP DR+ A
Sbjct: 76 -----------LPQDVAYYKEEL-PERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNGA- 122
Query: 429 TPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHPPPGEVMAISALDGTSTA 488
+ V + GLP R G CPYY++TGTC++G CKF HP P +G STA
Sbjct: 123 ----QPVMFNVIGLPMRLGEKPCPYYLRTGTCRFGVACKFHHPQPD--------NGHSTA 170
Query: 489 VG 490
G
Sbjct: 171 YG 172
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 108/285 (37%), Gaps = 81/285 (28%)
Query: 125 NLPVYPQRPGEKDCAYYMQTRTCKFGDTCKFDHPI------------WVPEGGIPDWKEV 172
N+ P R GEK C YY++T TC+FG CKF HP P + +
Sbjct: 128 NVIGLPMRLGEKPCPYYLRTGTCRFGVACKFHHPQPDNGHSTAYGMSSFPAADLRYASGL 187
Query: 173 PVIASSESLPERPGEPD--CPYFLKTQRCKF----------GSKCKFNHPKDKLI-GSSD 219
++++ +LP RP P P + + S +N GSS
Sbjct: 188 TMMSTYGTLP-RPQVPQSYVPILVSPSQGFLPPQGWAPYMAASNSMYNVKNQPYYSGSSA 246
Query: 220 SGNGDVS---ALPERPSEPPCAFYLKNGTCKFGATCKFDHPKDFQLPSVGQENGIGEQNE 276
S V+ L E +P C F++ GTCK+G CK+ HP
Sbjct: 247 SMAMAVALNRGLSESSDQPECRFFMNTGTCKYGDDCKYSHP------------------- 287
Query: 277 SVIKTDETTGLLNPGMSLFSHAPAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNH 336
G+ + S P L N LP RPG+ C + G CK+G C+++
Sbjct: 288 --------------GVRI-SQPPPSLINPFVLPARPGQPACGNFRSYGFCKFGPNCKFD- 331
Query: 337 PERTAINPPAAAIVHPLITSPAASLGISVVSPAAS---LYQTIDP 378
HP++ P ++ S+ +P AS +Q I P
Sbjct: 332 --------------HPMLPYPGLTMATSLPTPFASPVTTHQRISP 362
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 422 IDRSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHP 471
I+ + K ET L P R G C +Y++TG C YG++C+++HP
Sbjct: 24 IEDAFRKMKVNETGVEELNPYPDRPGERDCQFYLRTGLCGYGSSCRYNHP 73
>sp|Q9STM4|C3H43_ARATH Zinc finger CCCH domain-containing protein 43 OS=Arabidopsis
thaliana GN=At3g48440 PE=1 SV=1
Length = 448
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/360 (29%), Positives = 153/360 (42%), Gaps = 111/360 (30%)
Query: 177 SSESLPERPGEPDCPYFLKTQRCKFGSKCKFNHP--------KDKLIGSSDSGNGDVSAL 228
S P RPG DC ++++T CKFGS CKFNHP +D + + G + +
Sbjct: 103 SENVYPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQIARDNKVREKEDDGGKLGLI 162
Query: 229 PERPSEPPCAFYLKNGTCKFGATCKFDHPKDFQLPSVGQENGIGEQNESVIKTDETTGLL 288
C +Y + G CK+G TC+F+H +P G
Sbjct: 163 -------DCKYYFRTGGCKYGETCRFNH----TIPKSG---------------------- 189
Query: 289 NPGMSLFSHAPAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAI------ 342
+ AP + N GLP+RPGE++CP+Y++ GSCKYG+ C++NHP+ T I
Sbjct: 190 ------LASAPEL--NFLGLPLRPGEVECPYYMRNGSCKYGAECKFNHPDPTTIGGTDSP 241
Query: 343 -----NPPAAAIVHPLITSPAASL-----------------------GISVVSPAASLYQ 374
N + P T A+S G++ +P + YQ
Sbjct: 242 SFRGNNGVSIGTFSPKATFQASSTSWSSPRHVNGTSPFIPVMLSQTHGVTSQNPEWNGYQ 301
Query: 375 T-----------------IDPRLAQATLGVS-------PSLYPQRPGQMECDYYMKTGVC 410
++ A+ ++ +S +P+RP Q EC YYMKTG C
Sbjct: 302 ASVYSSERGVFSPSTTYLMNNSSAETSMLLSQYRHQMPAEEFPERPDQPECSYYMKTGDC 361
Query: 411 KFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDH 470
KF CK+HHP +R P L GLP R C YY + G CK+G C+FDH
Sbjct: 362 KFKFNCKYHHPKNR----LPKLPPYALNDKGLPLRPDQNICTYYSRYGICKFGPACRFDH 417
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 151/379 (39%), Gaps = 121/379 (31%)
Query: 128 VYPQRPGEKDCAYYMQTRTCKFGDTCKFDHPI---------------------------- 159
VYP RPG +DC++YM+T +CKFG +CKF+HP+
Sbjct: 106 VYPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQIARDNKVREKEDDGGKLGLIDCK 165
Query: 160 ------------------WVPEGGIPDWKEVPVIASSESLPERPGEPDCPYFLKTQRCKF 201
+P+ G+ E+ + LP RPGE +CPY+++ CK+
Sbjct: 166 YYFRTGGCKYGETCRFNHTIPKSGLASAPELNFLG----LPLRPGEVECPYYMRNGSCKY 221
Query: 202 GSKCKFNHPKDKLIGSSDS----GNGDVS-------ALPERPSEPPCAFYLKNGTCKF-- 248
G++CKFNHP IG +DS GN VS A + S + NGT F
Sbjct: 222 GAECKFNHPDPTTIGGTDSPSFRGNNGVSIGTFSPKATFQASSTSWSSPRHVNGTSPFIP 281
Query: 249 -------GATCKFDHPKDFQLPSVGQENGIGEQNESVIKTD---ETTGLLNPGMSLFSH- 297
G T + +Q E G+ + + + + ET+ LL S + H
Sbjct: 282 VMLSQTHGVTSQNPEWNGYQASVYSSERGVFSPSTTYLMNNSSAETSMLL----SQYRHQ 337
Query: 298 APAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSP 357
PA + P RP + +C +Y+KTG CK+ C+Y+HP+ P A+ +
Sbjct: 338 MPA-----EEFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGL--- 389
Query: 358 AASLGISVVSPAASLYQTIDPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCK 417
P RP Q C YY + G+CKFG C+
Sbjct: 390 -----------------------------------PLRPDQNICTYYSRYGICKFGPACR 414
Query: 418 FHHPIDRSAAKTPSQETVK 436
F H + + SQ V+
Sbjct: 415 FDHSVQPPYSTESSQAIVE 433
Score = 119 bits (297), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 104/233 (44%), Gaps = 57/233 (24%)
Query: 261 QLPSVGQENGIGEQNESVIKTDETTGLL--NPGMSLFSHAPAMLHNSKGL---------- 308
+L +VG EQ+E ++ E+ G L N +++ + G
Sbjct: 43 KLKNVGLNEVTKEQSEKMMSVSESNGGLDSNAVVTINQEEEEEEEDRDGYGYGDGWSENE 102
Query: 309 -----PIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAASLGI 363
P+RPG DC FY++TGSCK+GS+C++NHP
Sbjct: 103 SENVYPVRPGAEDCSFYMRTGSCKFGSSCKFNHP-------------------------- 136
Query: 364 SVVSPAASLYQTIDPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPID 423
A +Q + L G ++C YY +TG CK+GE C+F+H I
Sbjct: 137 -----LARKFQIARDNKVREKEDDGGKL-----GLIDCKYYFRTGGCKYGETCRFNHTIP 186
Query: 424 RSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHPPPGEV 476
+S + + L GLP R G V CPYYM+ G+CKYGA CKF+HP P +
Sbjct: 187 KSGLASAPE----LNFLGLPLRPGEVECPYYMRNGSCKYGAECKFNHPDPTTI 235
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 388 SPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREG 447
S ++YP RPG +C +YM+TG CKFG CKF+HP+ R + + G + G
Sbjct: 103 SENVYPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQIARDNKVREKEDDG--GKLG 160
Query: 448 AVHCPYYMKTGTCKYGATCKFDHPPPGEVMA 478
+ C YY +TG CKYG TC+F+H P +A
Sbjct: 161 LIDCKYYFRTGGCKYGETCRFNHTIPKSGLA 191
>sp|Q5NAW2|C3H6_ORYSJ Zinc finger CCCH domain-containing protein 6 OS=Oryza sativa subsp.
japonica GN=Os01g0258700 PE=2 SV=2
Length = 476
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 154/316 (48%), Gaps = 63/316 (19%)
Query: 181 LPERPGEPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNG--DVSAL--PERPSEPP 236
LPERPGE DC Y+L+T C FG +C++NHP+D+ G ++ G G + +AL PER +P
Sbjct: 56 LPERPGEEDCVYYLRTGACGFGDRCRYNHPRDR--GGTEFGGGARNAAALDYPERAGQPI 113
Query: 237 CAFYLKNGTCKFGATCKFDHPKDFQLPSVGQENGIGEQNESVIKTDETTGLLNPGMSLFS 296
C +Y+K GTCKFG CK+ HPK Q+ +V+
Sbjct: 114 CEYYMKTGTCKFGTNCKYHHPK---------------QDGAVL----------------- 141
Query: 297 HAPAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAI----------NPPA 346
P ML+NS G PIR GE +C +Y+KTG CK+G+TC+++HPE + P+
Sbjct: 142 --PVMLNNS-GFPIRLGEKECSYYMKTGQCKFGTTCKFHHPEFGGVPMTPGIYPPLQSPS 198
Query: 347 AAIVHPLITSPAASLGISVVSPAASLYQTIDPRLAQATL----GVSP---SLYPQRPG-- 397
A HP + +G V P + + + P + + + G SP S+ P G
Sbjct: 199 IASPHPYASLANWQMGRPPVVPGSYIPGSYTPMMLSSGMIPLQGWSPYPASVNPVVSGGA 258
Query: 398 QMECDYYMKTGVCKFGEKCKFHH--PIDRSAAKTPSQETVKLTLAGLPRREGAVHCPYYM 455
Q G+ G + P A+ T Q + G P R G C YYM
Sbjct: 259 QQNVQAGPVYGMGHHGSSSTIAYGGPYVPYASST-GQSSNNQQEHGFPERPGQPDCQYYM 317
Query: 456 KTGTCKYGATCKFDHP 471
+TG CK+GATCK+ HP
Sbjct: 318 RTGDCKFGATCKYHHP 333
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/348 (31%), Positives = 158/348 (45%), Gaps = 31/348 (8%)
Query: 130 PQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPGEPD 189
P+RPGE+DC YY++T C FGD C+++HP + G ++ A++ PER G+P
Sbjct: 57 PERPGEEDCVYYLRTGACGFGDRCRYNHPR---DRGGTEFGGGARNAAALDYPERAGQPI 113
Query: 190 CPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCAFYLKNGTCKFG 249
C Y++KT CKFG+ CK++HPK G+ + S P R E C++Y+K G C
Sbjct: 114 CEYYMKTGTCKFGTNCKYHHPKQD--GAVLPVMLNNSGFPIRLGEKECSYYMKTGQC--- 168
Query: 250 ATCKFDHPKDFQLPSVGQENGIGEQNESVIKTDETTGLLNPGMSLFSHAPAMLHNSK--G 307
KF F P G G+ + ++ + +P H A L N +
Sbjct: 169 ---KFGTTCKFHHPEFG---GV-PMTPGIYPPLQSPSIASP------HPYASLANWQMGR 215
Query: 308 LPIRPGELD----CPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAASLGI 363
P+ PG P L +G Y ++ A V G
Sbjct: 216 PPVVPGSYIPGSYTPMMLSSGMIPLQGWSPYPASVNPVVSGGAQQNVQAGPVYGMGHHGS 275
Query: 364 SVVSPAASLYQTIDPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPID 423
S Y Q++ +P+RPGQ +C YYM+TG CKFG CK+HHP +
Sbjct: 276 SSTIAYGGPYVPYASSTGQSSNNQQEHGFPERPGQPDCQYYMRTGDCKFGATCKYHHPRE 335
Query: 424 RSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHP 471
SA K+ + LP R GA C YY + G C+YG CK+DHP
Sbjct: 336 LSAPKS----GYMVNSLCLPLRPGAQPCAYYAQNGYCRYGVACKYDHP 379
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 81/169 (47%), Gaps = 40/169 (23%)
Query: 308 LPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAASLGISVVS 367
LP RPGE DC +YL+TG+C +G CRYNHP G +
Sbjct: 56 LPERPGEEDCVYYLRTGACGFGDRCRYNHPRDRG----------------GTEFGGGARN 99
Query: 368 PAASLYQTIDPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAA 427
AA +D YP+R GQ C+YYMKTG CKFG CK+HHP A
Sbjct: 100 AAA-----LD--------------YPERAGQPICEYYMKTGTCKFGTNCKYHHPKQDGAV 140
Query: 428 KTPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHPPPGEV 476
V L +G P R G C YYMKTG CK+G TCKF HP G V
Sbjct: 141 L-----PVMLNNSGFPIRLGEKECSYYMKTGQCKFGTTCKFHHPEFGGV 184
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 53/83 (63%), Gaps = 7/83 (8%)
Query: 129 YPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPGEP 188
YP+R G+ C YYM+T TCKFG CK+ HP D +PV+ ++ P R GE
Sbjct: 105 YPERAGQPICEYYMKTGTCKFGTNCKYHHPKQ-------DGAVLPVMLNNSGFPIRLGEK 157
Query: 189 DCPYFLKTQRCKFGSKCKFNHPK 211
+C Y++KT +CKFG+ CKF+HP+
Sbjct: 158 ECSYYMKTGQCKFGTTCKFHHPE 180
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 68/152 (44%), Gaps = 35/152 (23%)
Query: 220 SGNGDVSALPERPSEPPCAFYLKNGTCKFGATCKFDHPKDFQLPSVGQENGIGEQNESVI 279
S N PERP +P C +Y++ G CKFGATCK+ HP++ P G
Sbjct: 296 SNNQQEHGFPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSG------------- 342
Query: 280 KTDETTGLLNPGMSLFSHAPAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPER 339
+ NS LP+RPG C +Y + G C+YG C+Y+HP
Sbjct: 343 ---------------------YMVNSLCLPLRPGAQPCAYYAQNGYCRYGVACKYDHPMG 381
Query: 340 TAINPPAAAIVHPLITSPAASLGISVVSPAAS 371
T P+A + + +P +G S+ + A S
Sbjct: 382 TLGYSPSALPLSDMPIAPYP-IGFSIATLAPS 412
Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 10/88 (11%)
Query: 129 YPQRPGEKDCAYYMQTRTCKFGDTCKFDHP--IWVPEGGIPDWKEVPVIASSESLPERPG 186
+P+RPG+ DC YYM+T CKFG TCK+ HP + P+ G + +S LP RPG
Sbjct: 304 FPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGY--------MVNSLCLPLRPG 355
Query: 187 EPDCPYFLKTQRCKFGSKCKFNHPKDKL 214
C Y+ + C++G CK++HP L
Sbjct: 356 AQPCAYYAQNGYCRYGVACKYDHPMGTL 383
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 38/116 (32%)
Query: 307 GLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAASLGISVV 366
G P RPG+ DC +Y++TG CK+G+TC+Y+HP R P + +V+ L
Sbjct: 303 GFPERPGQPDCQYYMRTGDCKFGATCKYHHP-RELSAPKSGYMVNSLCL----------- 350
Query: 367 SPAASLYQTIDPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPI 422
P RPG C YY + G C++G CK+ HP+
Sbjct: 351 --------------------------PLRPGAQPCAYYAQNGYCRYGVACKYDHPM 380
>sp|O48772|C3H26_ARATH Zinc finger CCCH domain-containing protein 26 OS=Arabidopsis
thaliana GN=ZFN2 PE=2 SV=1
Length = 453
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 161/348 (46%), Gaps = 62/348 (17%)
Query: 129 YPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIW-VPEGGIPDWKEVPVIASSESLPERPGE 187
YP RPGE+DC ++++T C +G++C+++HP+ +P+G +I + LPER G+
Sbjct: 41 YPDRPGERDCQFFLRTGQCGYGNSCRYNHPLTNLPQG---------IIYYRDQLPERVGQ 91
Query: 188 PDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNG----DVSALPERPSEPPCAFYLKN 243
PDC +T CK+G CK++HPKD+ +G G +V LP R E PC +Y++
Sbjct: 92 PDC----ETGACKYGPTCKYHHPKDR------NGAGPVLFNVLGLPMRQGEKPCPYYMQT 141
Query: 244 GTCKFGATCKFDHPKDFQLPSVGQENGIGEQNESVIKTDETTGL-LNPGMSLFSHAPAML 302
G C+FG CKF HP PS G + + + + G GM++ S PA
Sbjct: 142 GLCRFGVACKFHHPHPHSQPSNG-------HSAYAMSSFPSVGFPYASGMTMVSLPPAT- 193
Query: 303 HNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAASLG 362
YG+ R P+ A P A L+ +
Sbjct: 194 -------------------------YGAIPRPQVPQSQAYMPYMVAPSQGLLPPQGWATY 228
Query: 363 ISVVSPAASLYQTIDPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPI 422
++ +P ++ +D + + S + + EC ++M TG CK+G+ CK+ HP
Sbjct: 229 MTASNPIYNMKTQLDSSSSASVAVTVTSHHHSFSERAECRFFMNTGTCKYGDDCKYSHPK 288
Query: 423 DRSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDH 470
+R P+ L LP R G C + G CK+GA CKFDH
Sbjct: 289 ERLLQSPPT----LLNPIVLPARPGQPACGNFKAYGFCKFGANCKFDH 332
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 80/172 (46%), Gaps = 49/172 (28%)
Query: 302 LHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAASL 361
+ S P RPGE DC F+L+TG C YG++CRYNHP N P I +
Sbjct: 35 MEQSSPYPDRPGERDCQFFLRTGQCGYGNSCRYNHP---LTNLPQGIIYY---------- 81
Query: 362 GISVVSPAASLYQTIDPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHP 421
P+R GQ +C+ TG CK+G CK+HHP
Sbjct: 82 ---------------------------RDQLPERVGQPDCE----TGACKYGPTCKYHHP 110
Query: 422 IDRSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHPPP 473
DR+ A V + GLP R+G CPYYM+TG C++G CKF HP P
Sbjct: 111 KDRNGAG-----PVLFNVLGLPMRQGEKPCPYYMQTGLCRFGVACKFHHPHP 157
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 137 DCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPGEPDCPYFLKT 196
+C ++M T TCK+GD CK+ HP + P + + LP RPG+P C F
Sbjct: 266 ECRFFMNTGTCKYGDDCKYSHPKER------LLQSPPTLLNPIVLPARPGQPACGNFKAY 319
Query: 197 QRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPE-RPSEPPCAFYLK 242
CKFG+ CKF+H L+ ++ +S+LP P PP + L+
Sbjct: 320 GFCKFGANCKFDH--SMLLNPYNNTGLAMSSLPTPYPYAPPVSTNLR 364
>sp|Q5JLB5|C3H12_ORYSJ Zinc finger CCCH domain-containing protein 12 OS=Oryza sativa
subsp. japonica GN=Os01g0917400 PE=2 SV=2
Length = 439
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/348 (31%), Positives = 152/348 (43%), Gaps = 74/348 (21%)
Query: 182 PERPGEPDCPYFLKTQRCKFGSKCKFNHPKDK-LIGSSDSGNGDVSALPERPSEPPCAFY 240
PER GEPDC Y+L+T C+FG C+FNHP+D+ L +S G+ PER +P C +Y
Sbjct: 78 PERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLAIASARMKGE---YPERMGQPECQYY 134
Query: 241 LKNGTCKFGATCKFDHPKDFQLPSVGQENGIGEQNESVIKTDETTGLLNPGMSLFSHAPA 300
LK GTCKFG TCKF HP++ + GI + +
Sbjct: 135 LKTGTCKFGPTCKFHHPRE--------KAGIAGRVQL----------------------- 163
Query: 301 MLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPER-TAINPPAAAIVHPLITSPAA 359
N+ G P+RP E +C +YLKTG CKYG+TC+++HPE A+ + ++P + S A
Sbjct: 164 ---NTLGYPLRPSEKECAYYLKTGQCKYGNTCKFHHPELFNAMASSRGSPIYPSVHSSAT 220
Query: 360 S--------------LGISVVSPAASLYQTIDPRLAQATLGVSPS-------LYP----- 393
+ G + SP P + L PS + P
Sbjct: 221 AGPPYTGTMASWAFPRGSFIPSPRWQNPSNYAPMIVPQGLVQVPSWNSYTGQMMPVSSSE 280
Query: 394 ---QRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVH 450
Q PG + Y V P S+ P + + P R
Sbjct: 281 SRLQSPGAQQ-TYGTSQQVDASAGNQGMLSPYRSSSYPVPQYALQRENV--FPERPDQPE 337
Query: 451 CPYYMKTGTCKYGATCKFDHPPPGEVMAISALDGTSTAVGEEVKGDEK 498
C YYMKTG CK+GA CKF HP V ++ D + VG ++ E+
Sbjct: 338 CQYYMKTGDCKFGAVCKFHHP---RVRSMPTPDCVLSPVGLPLRPGEE 382
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 81/135 (60%), Gaps = 14/135 (10%)
Query: 129 YPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSE---SLPERP 185
YP+R GE DC YY++T C+FG +C+F+HP IAS+ PER
Sbjct: 77 YPERSGEPDCTYYLRTGLCRFGMSCRFNHP----------QDRNLAIASARMKGEYPERM 126
Query: 186 GEPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCAFYLKNGT 245
G+P+C Y+LKT CKFG CKF+HP++K G + + P RPSE CA+YLK G
Sbjct: 127 GQPECQYYLKTGTCKFGPTCKFHHPREK-AGIAGRVQLNTLGYPLRPSEKECAYYLKTGQ 185
Query: 246 CKFGATCKFDHPKDF 260
CK+G TCKF HP+ F
Sbjct: 186 CKYGNTCKFHHPELF 200
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 145/338 (42%), Gaps = 82/338 (24%)
Query: 120 IESASNLPVYPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSE 179
I SA YP+R G+ +C YY++T TCKFG TCKF HP + GI ++ +
Sbjct: 113 IASARMKGEYPERMGQPECQYYLKTGTCKFGPTCKFHHP--REKAGIAGRVQLNTLG--- 167
Query: 180 SLPERPGEPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPP--- 236
P RP E +C Y+LKT +CK+G+ CKF+HP+ +S G+ ++ + P
Sbjct: 168 -YPLRPSEKECAYYLKTGQCKYGNTCKFHHPELFNAMASSRGSPIYPSVHSSATAGPPYT 226
Query: 237 ---CAFYLKNGTCKFGATCKFDHPKDF----------QLPSVGQENGI------------ 271
++ G+ F + ++ +P ++ Q+PS G
Sbjct: 227 GTMASWAFPRGS--FIPSPRWQNPSNYAPMIVPQGLVQVPSWNSYTGQMMPVSSSESRLQ 284
Query: 272 --GEQ-----NESVIKTDETTGLLNPGMSLFSHAPA-MLHNSKGLPIRPGELDCPFYLKT 323
G Q ++ V + G+L+P S P L P RP + +C +Y+KT
Sbjct: 285 SPGAQQTYGTSQQVDASAGNQGMLSPYRSSSYPVPQYALQRENVFPERPDQPECQYYMKT 344
Query: 324 GSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAASLGISVVSPAASLYQTIDPRLAQA 383
G CK+G+ C+++HP ++ P +
Sbjct: 345 GDCKFGAVCKFHHPRVRSMPTPDCVL---------------------------------- 370
Query: 384 TLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHP 421
SP P RPG+ C +Y + G+CKFG CKF HP
Sbjct: 371 ----SPVGLPLRPGEELCKFYSRYGICKFGANCKFDHP 404
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Query: 386 GVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRR 445
+ P YP+R G+ +C YY++TG+C+FG C+F+HP DR+ A ++ + P R
Sbjct: 71 AMQPGPYPERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLAIASARMKGE-----YPER 125
Query: 446 EGAVHCPYYMKTGTCKYGATCKFDHPPPGEVMAISALDGTSTAVGEEVKGDEKE 499
G C YY+KTGTCK+G TCKF H P E I+ +T +G ++ EKE
Sbjct: 126 MGQPECQYYLKTGTCKFGPTCKFHH--PREKAGIAGRVQLNT-LGYPLRPSEKE 176
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 130 PQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGI 166
P RPGE+ C +Y + CKFG CKFDHP P G+
Sbjct: 376 PLRPGEELCKFYSRYGICKFGANCKFDHPTMAPPMGV 412
>sp|Q2R4J4|C3H63_ORYSJ Zinc finger CCCH domain-containing protein 63 OS=Oryza sativa
subsp. japonica GN=Os11g0472000 PE=2 SV=2
Length = 444
Score = 142 bits (357), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 106/323 (32%), Positives = 146/323 (45%), Gaps = 74/323 (22%)
Query: 182 PERPGEPDCPYFLKTQRCKFGSKCKFNHPKD-KLIGSSDSGNGDVSALPERPSEPPCAFY 240
PER GEPDC Y+++T C+FG CKFNHP D K+ ++ G+ P+R +P C +Y
Sbjct: 54 PERIGEPDCSYYMRTGLCRFGMTCKFNHPADRKMAVAAARMKGE---YPQRIGQPECQYY 110
Query: 241 LKNGTCKFGATCKFDHPKDFQLPSVGQENGIGEQNESVIKTDETTGLLNPGMSLFSHAPA 300
LK GTCKFGATCKF HP++ ++ I T
Sbjct: 111 LKTGTCKFGATCKFHHPRE----------------KAAIATR------------------ 136
Query: 301 MLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPE--------RTAINPPAAAIVHP 352
+ N+ G P+RP E +C +YL+TG CK+GSTC+++HP+ R ++ P ++ P
Sbjct: 137 VQLNALGYPLRPNEKECAYYLRTGQCKFGSTCKFHHPQPSNTMVAVRGSVYSPGQSVTSP 196
Query: 353 -------LIT----SPAASLGISVVSPAASLYQ--TIDPRLAQ--------ATLGVSPSL 391
+T S +AS S P S Y + P L Q A +G S S
Sbjct: 197 SQHTYPGAVTNWPLSRSASFIASPRWPGHSSYAQVIVPPGLVQVPGWNPYAAQIGSSSSD 256
Query: 392 YPQRPGQMECDYYM---KTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGA 448
QR YY + G++ F A P + P R
Sbjct: 257 DQQRTAG-GAQYYTGSRHSETPNMGDQGMFS---SYQAGSVPLGLYTVQRESIFPERPDQ 312
Query: 449 VHCPYYMKTGTCKYGATCKFDHP 471
C +YMKTG CK+GA CKF HP
Sbjct: 313 PECQFYMKTGDCKFGAVCKFHHP 335
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 145/334 (43%), Gaps = 89/334 (26%)
Query: 129 YPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESL-----PE 183
YPQR G+ +C YY++T TCKFG TCKF HP +E IA+ L P
Sbjct: 98 YPQRIGQPECQYYLKTGTCKFGATCKFHHP-----------REKAAIATRVQLNALGYPL 146
Query: 184 RPGEPDCPYFLKTQRCKFGSKCKFNHPKDK-----LIGSSDSGNGDVSALPERPSEPPCA 238
RP E +C Y+L+T +CKFGS CKF+HP+ + GS S V++ +
Sbjct: 147 RPNEKECAYYLRTGQCKFGSTCKFHHPQPSNTMVAVRGSVYSPGQSVTSPSQHTYPGAVT 206
Query: 239 FYLKNGTCKFGATCKFDH----------PKDFQLP-------SVG-------QENGIGEQ 274
+ + + F A+ ++ P Q+P +G Q G Q
Sbjct: 207 NWPLSRSASFIASPRWPGHSSYAQVIVPPGLVQVPGWNPYAAQIGSSSSDDQQRTAGGAQ 266
Query: 275 NESVIKTDETTGLLNPGMSLFSHAPAM------LHNSKGLPIRPGELDCPFYLKTGSCKY 328
+ + ET + + GM A ++ + P RP + +C FY+KTG CK+
Sbjct: 267 YYTGSRHSETPNMGDQGMFSSYQAGSVPLGLYTVQRESIFPERPDQPECQFYMKTGDCKF 326
Query: 329 GSTCRYNHPERTAINPPAAAIVHPLITSPAASLGISVVSPAASLYQTIDPRLAQATLGVS 388
G+ C+++HP+ I P A+ +SLG+
Sbjct: 327 GAVCKFHHPKERIIPTPNCAL---------SSLGL------------------------- 352
Query: 389 PSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPI 422
P RPG+ C +Y + G+CKFG CKF HP+
Sbjct: 353 ----PLRPGEPICTFYSRYGICKFGPNCKFDHPM 382
Score = 125 bits (314), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 87/133 (65%), Gaps = 14/133 (10%)
Query: 129 YPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSE-SLPERPGE 187
YP+R GE DC+YYM+T C+FG TCKF+HP D K A + P+R G+
Sbjct: 53 YPERIGEPDCSYYMRTGLCRFGMTCKFNHPA--------DRKMAVAAARMKGEYPQRIGQ 104
Query: 188 PDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSAL--PERPSEPPCAFYLKNGT 245
P+C Y+LKT CKFG+ CKF+HP++K ++ + ++AL P RP+E CA+YL+ G
Sbjct: 105 PECQYYLKTGTCKFGATCKFHHPREK---AAIATRVQLNALGYPLRPNEKECAYYLRTGQ 161
Query: 246 CKFGATCKFDHPK 258
CKFG+TCKF HP+
Sbjct: 162 CKFGSTCKFHHPQ 174
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 92/185 (49%), Gaps = 45/185 (24%)
Query: 309 PIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAASLGISVVSP 368
P R GE DC +Y++TG C++G TC++NHP
Sbjct: 54 PERIGEPDCSYYMRTGLCRFGMTCKFNHP------------------------------- 82
Query: 369 AASLYQTIDPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAK 428
D ++A A + YPQR GQ EC YY+KTG CKFG CKFHHP +++A
Sbjct: 83 -------ADRKMAVAAARMK-GEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAIA 134
Query: 429 TPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHPPPGEVMAISALDGTSTA 488
T V+L G P R C YY++TG CK+G+TCKF HP P M A+ G+ +
Sbjct: 135 T----RVQLNALGYPLRPNEKECAYYLRTGQCKFGSTCKFHHPQPSNTMV--AVRGSVYS 188
Query: 489 VGEEV 493
G+ V
Sbjct: 189 PGQSV 193
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 65/108 (60%), Gaps = 8/108 (7%)
Query: 392 YPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHC 451
YP+R G+ +C YYM+TG+C+FG CKF+HP DR A ++ + P+R G C
Sbjct: 53 YPERIGEPDCSYYMRTGLCRFGMTCKFNHPADRKMAVAAARMKGE-----YPQRIGQPEC 107
Query: 452 PYYMKTGTCKYGATCKFDHPPPGEVMAISALDGTSTAVGEEVKGDEKE 499
YY+KTGTCK+GATCKF HP +A A+G ++ +EKE
Sbjct: 108 QYYLKTGTCKFGATCKFHHPREKAAIATRV---QLNALGYPLRPNEKE 152
Score = 89.0 bits (219), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 56/88 (63%), Gaps = 5/88 (5%)
Query: 390 SLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAV 449
S++P+RP Q EC +YMKTG CKFG CKFHHP +R TP+ L+ GLP R G
Sbjct: 304 SIFPERPDQPECQFYMKTGDCKFGAVCKFHHPKER-IIPTPN---CALSSLGLPLRPGEP 359
Query: 450 HCPYYMKTGTCKYGATCKFDHPPPGEVM 477
C +Y + G CK+G CKFDH P G VM
Sbjct: 360 ICTFYSRYGICKFGPNCKFDH-PMGTVM 386
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 63/136 (46%), Gaps = 42/136 (30%)
Query: 226 SALPERPSEPPCAFYLKNGTCKFGATCKFDHPKDFQLPSVGQENGIGEQNESVIKTDETT 285
S PERP +P C FY+K G CKFGA CKF HPK+ +P+
Sbjct: 304 SIFPERPDQPECQFYMKTGDCKFGAVCKFHHPKERIIPT--------------------- 342
Query: 286 GLLNPGMSLFSHAPAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPP 345
P +S GLP+RPGE C FY + G CK+G C+++HP T
Sbjct: 343 -------------PNCALSSLGLPLRPGEPICTFYSRYGICKFGPNCKFDHPMGT----- 384
Query: 346 AAAIVHPLITSPAASL 361
+++ L TSP +
Sbjct: 385 ---VMYGLATSPTGDV 397
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 61/102 (59%), Gaps = 9/102 (8%)
Query: 128 VYPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIA-SSESLPERPG 186
++P+RP + +C +YM+T CKFG CKF HP E IP P A SS LP RPG
Sbjct: 305 IFPERPDQPECQFYMKTGDCKFGAVCKFHHP---KERIIP----TPNCALSSLGLPLRPG 357
Query: 187 EPDCPYFLKTQRCKFGSKCKFNHPKDKLI-GSSDSGNGDVSA 227
EP C ++ + CKFG CKF+HP ++ G + S GDVSA
Sbjct: 358 EPICTFYSRYGICKFGPNCKFDHPMGTVMYGLATSPTGDVSA 399
>sp|Q2QT65|C3H66_ORYSJ Zinc finger CCCH domain-containing protein 66 OS=Oryza sativa
subsp. japonica GN=Os12g0405100 PE=2 SV=1
Length = 454
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 146/324 (45%), Gaps = 69/324 (21%)
Query: 178 SESLPERPGEPDCPYFLKTQRCKFGSKCKFNHPKD-KLIGSSDSGNGDVSALPERPSEPP 236
S PER GEPDC Y+++T C+FG CKFNHP + KL ++ NG+ P R +P
Sbjct: 60 STPYPERIGEPDCSYYMRTGLCRFGMTCKFNHPPNRKLAVAAARMNGE---YPYRVGQPE 116
Query: 237 CAFYLKNGTCKFGATCKFDHPKDFQLPSVGQENGIGEQNESVIKTDETTGLLNPGMSLFS 296
C +YLK GTCKFGATCKF HP+ E L N
Sbjct: 117 CQYYLKTGTCKFGATCKFHHPR------------------------EKAALAN------- 145
Query: 297 HAPAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPE--------RTAINPPAAA 348
+ N G P+RP E +C +YL+TG CK+ STC+++HP+ R ++ P +
Sbjct: 146 ---RVQLNVLGYPMRPNEKECAYYLRTGQCKFASTCKFHHPQPSNTMVAVRNSMYSPGQS 202
Query: 349 IVHP-----------LITSPAASLGISVVSPAASLY-QTIDPRLAQATLGVSPSLYPQRP 396
P S +AS S P S Y Q I P+ G +P Y +
Sbjct: 203 ATSPGQHTYPGAVTNWTLSRSASFIASPRWPGHSGYAQVIVPQGLVQVPGWNP--YAAQM 260
Query: 397 GQMECDYYMKTGVCK--FGEKCKFHHPI-DRSAAKTPSQETVKL---TLAG---LPRREG 447
G D +T V +G + + D ++ +V + T+ G P R
Sbjct: 261 GSSSPDDQQRTPVTTQYYGSRQSETGGMGDHGMYQSYQGGSVPVGVYTVQGENIFPERPD 320
Query: 448 AVHCPYYMKTGTCKYGATCKFDHP 471
C +YMKTG CK+GA CKF HP
Sbjct: 321 QPECQFYMKTGDCKFGAVCKFHHP 344
Score = 125 bits (314), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 87/139 (62%), Gaps = 11/139 (7%)
Query: 121 ESASNLPVYPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWK-EVPVIASSE 179
ES + P YP+R GE DC+YYM+T C+FG TCKF+HP P+ K V +
Sbjct: 56 ESMESTP-YPERIGEPDCSYYMRTGLCRFGMTCKFNHP--------PNRKLAVAAARMNG 106
Query: 180 SLPERPGEPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCAF 239
P R G+P+C Y+LKT CKFG+ CKF+HP++K ++ +V P RP+E CA+
Sbjct: 107 EYPYRVGQPECQYYLKTGTCKFGATCKFHHPREK-AALANRVQLNVLGYPMRPNEKECAY 165
Query: 240 YLKNGTCKFGATCKFDHPK 258
YL+ G CKF +TCKF HP+
Sbjct: 166 YLRTGQCKFASTCKFHHPQ 184
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 148/328 (45%), Gaps = 78/328 (23%)
Query: 129 YPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPGEP 188
YP R G+ +C YY++T TCKFG TCKF HP + + + ++ V+ P RP E
Sbjct: 108 YPYRVGQPECQYYLKTGTCKFGATCKFHHP--REKAALANRVQLNVLG----YPMRPNEK 161
Query: 189 DCPYFLKTQRCKFGSKCKFNHPK--DKLIGSSDS--GNGDVSALPERPSEP-PCAFYLKN 243
+C Y+L+T +CKF S CKF+HP+ + ++ +S G + P + + P + +
Sbjct: 162 ECAYYLRTGQCKFASTCKFHHPQPSNTMVAVRNSMYSPGQSATSPGQHTYPGAVTNWTLS 221
Query: 244 GTCKFGATCKFDHPKDF----------QLP-------SVGQENGIGEQNESVI------K 280
+ F A+ ++ + Q+P +G + +Q V +
Sbjct: 222 RSASFIASPRWPGHSGYAQVIVPQGLVQVPGWNPYAAQMGSSSPDDQQRTPVTTQYYGSR 281
Query: 281 TDETTGLLNPGMSLFSHA---PAMLHNSKG---LPIRPGELDCPFYLKTGSCKYGSTCRY 334
ET G+ + GM P ++ +G P RP + +C FY+KTG CK+G+ C++
Sbjct: 282 QSETGGMGDHGMYQSYQGGSVPVGVYTVQGENIFPERPDQPECQFYMKTGDCKFGAVCKF 341
Query: 335 NHPERTAINPPAAAIVHPLITSPAASLGISVVSPAASLYQTIDPRLAQATLGVSPSLYPQ 394
+HP+ + P A+ SLG+ P
Sbjct: 342 HHPKERLVPAPNCAL---------NSLGL-----------------------------PL 363
Query: 395 RPGQMECDYYMKTGVCKFGEKCKFHHPI 422
RPG+ C +Y + G+CKFG CKF HP+
Sbjct: 364 RPGEPVCTFYSRYGICKFGPNCKFDHPM 391
Score = 115 bits (288), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 80/170 (47%), Gaps = 43/170 (25%)
Query: 309 PIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAASLGISVVSP 368
P R GE DC +Y++TG C++G TC++NHP + AA +
Sbjct: 64 PERIGEPDCSYYMRTGLCRFGMTCKFNHPPNRKLAVAAARMN------------------ 105
Query: 369 AASLYQTIDPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAK 428
YP R GQ EC YY+KTG CKFG CKFHHP +++A
Sbjct: 106 ---------------------GEYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAALA 144
Query: 429 TPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHPPPGEVMA 478
V+L + G P R C YY++TG CK+ +TCKF HP P M
Sbjct: 145 N----RVQLNVLGYPMRPNEKECAYYLRTGQCKFASTCKFHHPQPSNTMV 190
Score = 92.0 bits (227), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 78/146 (53%), Gaps = 16/146 (10%)
Query: 362 GISVVSPAASLYQ----TIDPRLAQATLGVSPSL----YPQRPGQMECDYYMKTGVCKFG 413
G+S +PA + + + Q TLG S+ YP+R G+ +C YYM+TG+C+FG
Sbjct: 25 GVSAAAPAIGPHHLGVAAAEEAMWQMTLGGGESMESTPYPERIGEPDCSYYMRTGLCRFG 84
Query: 414 EKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHPPP 473
CKF+HP +R A ++ + P R G C YY+KTGTCK+GATCKF HP
Sbjct: 85 MTCKFNHPPNRKLAVAAARMNGE-----YPYRVGQPECQYYLKTGTCKFGATCKFHHPRE 139
Query: 474 GEVMAISALDGTSTAVGEEVKGDEKE 499
+A +G ++ +EKE
Sbjct: 140 KAALANRV---QLNVLGYPMRPNEKE 162
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 390 SLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAV 449
+++P+RP Q EC +YMKTG CKFG CKFHHP +R L GLP R G
Sbjct: 313 NIFPERPDQPECQFYMKTGDCKFGAVCKFHHPKERLVPA----PNCALNSLGLPLRPGEP 368
Query: 450 HCPYYMKTGTCKYGATCKFDHP 471
C +Y + G CK+G CKFDHP
Sbjct: 369 VCTFYSRYGICKFGPNCKFDHP 390
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 78 DPTDHLKRPSEALYHPTLLGTHTSIGQSEAWYSTNSLAKRPRIESASNLPVYPQRPGEKD 137
P D + P Y+ + +G + S + + + ++P+RP + +
Sbjct: 264 SPDDQQRTPVTTQYYGSRQSETGGMGDHGMYQSYQGGSVPVGVYTVQGENIFPERPDQPE 323
Query: 138 CAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPV---IASSESLPERPGEPDCPYFL 194
C +YM+T CKFG CKF H P + VP +S LP RPGEP C ++
Sbjct: 324 CQFYMKTGDCKFGAVCKFHH---------PKERLVPAPNCALNSLGLPLRPGEPVCTFYS 374
Query: 195 KTQRCKFGSKCKFNHPKDKLI-GSSDSGNGDVSAL 228
+ CKFG CKF+HP L+ GS+ S GDVS++
Sbjct: 375 RYGICKFGPNCKFDHPMGTLMYGSATSPRGDVSSM 409
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 79/189 (41%), Gaps = 39/189 (20%)
Query: 159 IWVPEG--GIPDWKEVPVIASSESLPERPGEPDCPYFLKTQRCKFGSKCKFNHPKDKLIG 216
+ VP+G +P W S S ++ P + +++ + G + G
Sbjct: 241 VIVPQGLVQVPGWNPYAAQMGSSSPDDQQRTPVTTQYYGSRQSETGGMGDHGMYQSYQGG 300
Query: 217 SSDSGNGDVSA---LPERPSEPPCAFYLKNGTCKFGATCKFDHPKDFQLPSVGQENGIGE 273
S G V PERP +P C FY+K G CKFGA CKF HPK+ +P
Sbjct: 301 SVPVGVYTVQGENIFPERPDQPECQFYMKTGDCKFGAVCKFHHPKERLVP---------- 350
Query: 274 QNESVIKTDETTGLLNPGMSLFSHAPAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCR 333
AP NS GLP+RPGE C FY + G CK+G C+
Sbjct: 351 ------------------------APNCALNSLGLPLRPGEPVCTFYSRYGICKFGPNCK 386
Query: 334 YNHPERTAI 342
++HP T +
Sbjct: 387 FDHPMGTLM 395
>sp|Q5Z5Q3|C3H43_ORYSJ Zinc finger CCCH domain-containing protein 43 OS=Oryza sativa
subsp. japonica GN=Os06g0520600 PE=2 SV=1
Length = 711
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 80/149 (53%), Gaps = 26/149 (17%)
Query: 129 YPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPGEP 188
+P+RPGE DC+YY++ +CKFG +C ++HP P+ G D K +E P RPGEP
Sbjct: 41 HPRRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKK------PAEQFPRRPGEP 94
Query: 189 DCPYFLKTQRCKFGSKCKFNHPKDKLIGSSD---SGNG-----------------DVSAL 228
DC Y++K CKFG C+FNHP + SGN +V L
Sbjct: 95 DCSYYVKFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSKVEQVKLNVLGL 154
Query: 229 PERPSEPPCAFYLKNGTCKFGATCKFDHP 257
P RP C++Y+ G CKFG CKFDHP
Sbjct: 155 PLRPGTGLCSYYMNRGICKFGTNCKFDHP 183
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 86/205 (41%), Gaps = 61/205 (29%)
Query: 309 PIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAASLGISVVSP 368
P RPGE DC +Y+K GSCK+G +C YNHP+ P G P
Sbjct: 42 PRRPGEPDCSYYVKFGSCKFGISCVYNHPD------------------PRPQHGADDKKP 83
Query: 369 AASLYQTIDPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAK 428
A +P+RPG+ +C YY+K G CKFG C+F+HP
Sbjct: 84 AEQ--------------------FPRRPGEPDCSYYVKFGSCKFGMNCRFNHP---PRMP 120
Query: 429 TPSQ--------------------ETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKF 468
P Q E VKL + GLP R G C YYM G CK+G CKF
Sbjct: 121 VPPQQEYFSGNACHCHHIEGKSKVEQVKLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKF 180
Query: 469 DHPPPGEVMAISALDGTSTAVGEEV 493
DHP PG + + V +V
Sbjct: 181 DHPDPGSDHEKWVVSSNANQVSSQV 205
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 96/199 (48%), Gaps = 25/199 (12%)
Query: 179 ESLPERPGEPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCA 238
E P RPGEPDC Y++K CKFG C +NHP + +D P RP EP C+
Sbjct: 39 EQHPRRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKKP-AEQFPRRPGEPDCS 97
Query: 239 FYLKNGTCKFGATCKFDHPKDFQLPSVGQENGIGEQNESVIKTDETTGLLNPGMSLFSHA 298
+Y+K G+CKFG C+F+HP +P QE G + G S
Sbjct: 98 YYVKFGSCKFGMNCRFNHPPRMPVPP-QQEYFSG----NACHCHHIEGK--------SKV 144
Query: 299 PAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPA 358
+ N GLP+RPG C +Y+ G CK+G+ C+++HP+ P + +++S A
Sbjct: 145 EQVKLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKFDHPD------PGSDHEKWVVSSNA 198
Query: 359 ASLGISVVSPAASLYQTID 377
VS ++Y +D
Sbjct: 199 NQ-----VSSQVNIYSVLD 212
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 12/85 (14%)
Query: 392 YPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDR----SAAKTPSQETVKLTLAGLPRREG 447
+P+RPG+ +C YY+K G CKFG C ++HP R + K P+++ PRR G
Sbjct: 41 HPRRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKKPAEQ--------FPRRPG 92
Query: 448 AVHCPYYMKTGTCKYGATCKFDHPP 472
C YY+K G+CK+G C+F+HPP
Sbjct: 93 EPDCSYYVKFGSCKFGMNCRFNHPP 117
>sp|Q2QTY2|C3H65_ORYSJ Zinc finger CCCH domain-containing protein 65 OS=Oryza sativa
subsp. japonica GN=Os12g0278800 PE=2 SV=1
Length = 529
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 130/306 (42%), Gaps = 67/306 (21%)
Query: 189 DCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVS--ALPERPSEPPCAFYLKNGTC 246
+C Y+ CKFG CK+ H +D G +D+ D++ LP RP E C +Y++ G+C
Sbjct: 242 ECKYYSTPGGCKFGKACKYLH-RDGKEGKTDAEKVDLNFLGLPLRPGEKECPYYMRTGSC 300
Query: 247 KFGATCKFDHPKDFQL----PSVGQENGIGEQNESVIKTDETTGLLNPGMSLFSH----- 297
K+ CKF HP + P + ENG Q + + + + P +
Sbjct: 301 KYATNCKFHHPDPSNVASKDPQLEHENGDAPQQDVQGSSSQPNASIWPDQRTVNEHHVPF 360
Query: 298 -APAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINP-----------P 345
AP+ +++ LP + G P +N + +NP P
Sbjct: 361 IAPSPSYSAGMLPPQ-GMYPPP--------------EWNGYHQVPLNPYYPPGVPFQHFP 405
Query: 346 AAAIVHPLITSPAASLGISVVSPAASLYQTIDPRLAQATLGVSPSLYPQRPGQMECDYYM 405
AA I HP+ +P V S YP+RPGQ EC +++
Sbjct: 406 AAPINHPMYKAPEIPGHQQVPS----------------------EEYPERPGQPECQHFV 443
Query: 406 KTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGAT 465
K+G CKF KCK+HHP ++P L+ GLP + C YY + G CK+G
Sbjct: 444 KSGFCKFRMKCKYHHP------RSPVPPAGALSPLGLPIKPDQPVCTYYGRYGVCKFGPA 497
Query: 466 CKFDHP 471
C ++HP
Sbjct: 498 CAYNHP 503
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 93/217 (42%), Gaps = 49/217 (22%)
Query: 308 LPIRPGELDCPFYLKTGSCKYGSTCRYNHP------------------------------ 337
P RPGE DC +Y+K GSC++G C++NHP
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARKKKSRVKGSNGGSGSGGSNSSSNKASSP 164
Query: 338 --ERTAINPPAAAIVHPLITSPAASLGISVVSPAASL-------YQTID-------PRLA 381
E+ A + V P I+ SLG + A++L Y+ ID P+
Sbjct: 165 DDEQQAPKEEYGSYV-PDISPEVDSLGFADKGSASNLENFKKYSYEIIDVKKGRVEPKEL 223
Query: 382 QATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAG 441
+ + Q EC YY G CKFG+ CK+ H D KT E V L G
Sbjct: 224 KVAKEKRKEFISEGSSQEECKYYSTPGGCKFGKACKYLH-RDGKEGKT-DAEKVDLNFLG 281
Query: 442 LPRREGAVHCPYYMKTGTCKYGATCKFDHPPPGEVMA 478
LP R G CPYYM+TG+CKY CKF HP P V +
Sbjct: 282 LPLRPGEKECPYYMRTGSCKYATNCKFHHPDPSNVAS 318
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 166/394 (42%), Gaps = 86/394 (21%)
Query: 127 PVYPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPG 186
P +P+RPGE DC YY++ +C+FG CKF+HP + + S S +
Sbjct: 103 PRFPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARKKKSRVKGSNGGSGSGGSNSSSNKAS 162
Query: 187 EPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNG--------------DVSA----- 227
PD + + ++GS P+ +G +D G+ DV
Sbjct: 163 SPDD--EQQAPKEEYGSYVPDISPEVDSLGFADKGSASNLENFKKYSYEIIDVKKGRVEP 220
Query: 228 -------------LPERPSEPPCAFYLKNGTCKFGATCKFDHPKDFQLPSVGQENGIGEQ 274
+ E S+ C +Y G CKFG CK+ H +D G+E
Sbjct: 221 KELKVAKEKRKEFISEGSSQEECKYYSTPGGCKFGKACKYLH-RD------GKEG----- 268
Query: 275 NESVIKTDETTGLLNPGMSLFSHAPAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRY 334
KTD L N GLP+RPGE +CP+Y++TGSCKY + C++
Sbjct: 269 -----KTDAEKVDL---------------NFLGLPLRPGEKECPYYMRTGSCKYATNCKF 308
Query: 335 NHPERTAINPPAAAIVHPLITSPAASLGISVVSPAASLY---QTID----PRLAQA---T 384
+HP+ + + + H +P + S P AS++ +T++ P +A + +
Sbjct: 309 HHPDPSNVASKDPQLEHENGDAPQQDVQGSSSQPNASIWPDQRTVNEHHVPFIAPSPSYS 368
Query: 385 LGVSP--SLYPQRPG----QMECDYYMKTGV-CKFGEKCKFHHPIDRSAAKTPSQETVKL 437
G+ P +YP Q+ + Y GV + +HP+ + A + P + V
Sbjct: 369 AGMLPPQGMYPPPEWNGYHQVPLNPYYPPGVPFQHFPAAPINHPMYK-APEIPGHQQV-- 425
Query: 438 TLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHP 471
P R G C +++K+G CK+ CK+ HP
Sbjct: 426 PSEEYPERPGQPECQHFVKSGFCKFRMKCKYHHP 459
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 69/114 (60%), Gaps = 11/114 (9%)
Query: 155 FDHPIW-VPEGGIPDWKEVPVIASSESLPERPGEPDCPYFLKTQRCKFGSKCKFNHPKDK 213
+HP++ PE IP ++VP SE PERPG+P+C +F+K+ CKF KCK++HP+
Sbjct: 409 INHPMYKAPE--IPGHQQVP----SEEYPERPGQPECQHFVKSGFCKFRMKCKYHHPRSP 462
Query: 214 LIGSSDSGNGDVSALPERPSEPPCAFYLKNGTCKFGATCKFDHPKDFQ-LPSVG 266
+ +G LP +P +P C +Y + G CKFG C ++HP +F +P+ G
Sbjct: 463 V---PPAGALSPLGLPIKPDQPVCTYYGRYGVCKFGPACAYNHPFNFSPVPAAG 513
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 93/258 (36%), Gaps = 87/258 (33%)
Query: 130 PQRPGEKDCAYYMQTRTCKFGDTCKFDHP------------------------------- 158
P RPGEK+C YYM+T +CK+ CKF HP
Sbjct: 283 PLRPGEKECPYYMRTGSCKYATNCKFHHPDPSNVASKDPQLEHENGDAPQQDVQGSSSQP 342
Query: 159 ---IWVPEGGIPDWKEVPVIASSESL-------------PERPG---EPDCPYFLKTQRC 199
IW P+ + VP IA S S PE G P PY+
Sbjct: 343 NASIW-PDQRTVNEHHVPFIAPSPSYSAGMLPPQGMYPPPEWNGYHQVPLNPYYPPGVPF 401
Query: 200 KFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCAFYLKNGTCKFGATCKFDHPKD 259
+ NHP K PERP +P C ++K+G CKF CK+ HP+
Sbjct: 402 QHFPAAPINHPMYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGFCKFRMKCKYHHPRS 461
Query: 260 FQLPSVGQENGIGEQNESVIKTDETTGLLNPGMSLFSHAPAMLHNSKGLPIRPGELDCPF 319
P+ G L+P GLPI+P + C +
Sbjct: 462 PVPPA---------------------GALSP---------------LGLPIKPDQPVCTY 485
Query: 320 YLKTGSCKYGSTCRYNHP 337
Y + G CK+G C YNHP
Sbjct: 486 YGRYGVCKFGPACAYNHP 503
Score = 33.1 bits (74), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 126 LPVYPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIW---VPEGGIP 167
LP+ P +P C YY + CKFG C ++HP VP G P
Sbjct: 474 LPIKPDQP---VCTYYGRYGVCKFGPACAYNHPFNFSPVPAAGPP 515
>sp|Q0DBW8|C3H42_ORYSJ Zinc finger CCCH domain-containing protein 42 OS=Oryza sativa
subsp. japonica GN=Os06g0519400 PE=2 SV=1
Length = 279
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 80/160 (50%), Gaps = 20/160 (12%)
Query: 179 ESLPERPGEPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCA 238
+ P RPG PDC Y+++ CKFG +C +NHP + +G D P+RP E C
Sbjct: 74 QEYPRRPGVPDCSYYVEFGSCKFGMRCLYNHP------AKHAGGCDKLEHPQRPGEHDCL 127
Query: 239 FYLKNGTCKFGATCKFDHPKDFQLPSVGQENGIGEQNESVIKTDETTGLLNPGMSLFSHA 298
YL+ G CK+G C+F+HP D +LP Q + + G S H
Sbjct: 128 HYLRFGRCKYGMNCRFNHPPD-RLP----------QQQVYFPWKACHCHHSEGKSEAEHV 176
Query: 299 PAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPE 338
N GLP+RPG C +Y+ G CK+GS C+++HP
Sbjct: 177 KL---NFLGLPLRPGTGLCSYYMNRGICKFGSNCKFHHPN 213
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 79/149 (53%), Gaps = 30/149 (20%)
Query: 129 YPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPGEP 188
YP+RPG DC+YY++ +CKFG C ++HP G D E P+RPGE
Sbjct: 76 YPRRPGVPDCSYYVEFGSCKFGMRCLYNHP--AKHAGGCDKLE---------HPQRPGEH 124
Query: 189 DCPYFLKTQRCKFGSKCKFNHPKDKL-----------------IGSSDSGNGDVS--ALP 229
DC ++L+ RCK+G C+FNHP D+L G S++ + ++ LP
Sbjct: 125 DCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKACHCHHSEGKSEAEHVKLNFLGLP 184
Query: 230 ERPSEPPCAFYLKNGTCKFGATCKFDHPK 258
RP C++Y+ G CKFG+ CKF HP
Sbjct: 185 LRPGTGLCSYYMNRGICKFGSNCKFHHPN 213
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 79/183 (43%), Gaps = 61/183 (33%)
Query: 309 PIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAASLGISVVSP 368
P RPG DC +Y++ GSCK+G C YNHP + A
Sbjct: 77 PRRPGVPDCSYYVEFGSCKFGMRCLYNHPAKHAG-------------------------- 110
Query: 369 AASLYQTIDPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDR---- 424
G +PQRPG+ +C +Y++ G CK+G C+F+HP DR
Sbjct: 111 -----------------GCDKLEHPQRPGEHDCLHYLRFGRCKYGMNCRFNHPPDRLPQQ 153
Query: 425 -------------SAAKTPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHP 471
S K+ + E VKL GLP R G C YYM G CK+G+ CKF HP
Sbjct: 154 QVYFPWKACHCHHSEGKSEA-EHVKLNFLGLPLRPGTGLCSYYMNRGICKFGSNCKFHHP 212
Query: 472 PPG 474
G
Sbjct: 213 NSG 215
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 63/138 (45%), Gaps = 19/138 (13%)
Query: 345 PAAAIVHPLITSPAASLGISVVSPAASLYQTIDPRLAQAT----------LGVSPSLYPQ 394
P A + PAA A+S +T+D R T V P YP+
Sbjct: 19 PMATTTSSSASDPAAISPTPSQQHASSTVKTLDDRRPAGTSSSAGETEPKAAVEPQEYPR 78
Query: 395 RPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHCPYY 454
RPG +C YY++ G CKFG +C ++HP + + P+R G C +Y
Sbjct: 79 RPGVPDCSYYVEFGSCKFGMRCLYNHPAKHAGGCDKLEH---------PQRPGEHDCLHY 129
Query: 455 MKTGTCKYGATCKFDHPP 472
++ G CKYG C+F+HPP
Sbjct: 130 LRFGRCKYGMNCRFNHPP 147
>sp|Q3ECU8|C3H13_ARATH Zinc finger CCCH domain-containing protein 13 OS=Arabidopsis
thaliana GN=At1g48195 PE=4 SV=1
Length = 82
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 387 VSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRRE 446
+S +P+RPG+ EC YY++TG C + CK+HHP + TPS+ L GLP R
Sbjct: 1 MSEEKFPERPGEPECSYYLRTGNCYLKQNCKYHHPKN----ITPSEPQCTLNDKGLPLRP 56
Query: 447 GAVHCPYYMKTGTCKYGATCKFDH 470
G CP+Y + G C+ G TCKFDH
Sbjct: 57 GQAICPHYSRFGICRSGPTCKFDH 80
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 177 SSESLPERPGEPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPP 236
S E PERPGEP+C Y+L+T C CK++HPK+ + S + LP RP +
Sbjct: 2 SEEKFPERPGEPECSYYLRTGNCYLKQNCKYHHPKN-ITPSEPQCTLNDKGLPLRPGQAI 60
Query: 237 CAFYLKNGTCKFGATCKFDH 256
C Y + G C+ G TCKFDH
Sbjct: 61 CPHYSRFGICRSGPTCKFDH 80
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 48/109 (44%), Gaps = 34/109 (31%)
Query: 228 LPERPSEPPCAFYLKNGTCKFGATCKFDHPKDFQLPSVGQENGIGEQNESVIKTDETTGL 287
PERP EP C++YL+ G C CK+ HPK+ PS
Sbjct: 6 FPERPGEPECSYYLRTGNCYLKQNCKYHHPKNI-TPS----------------------- 41
Query: 288 LNPGMSLFSHAPAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNH 336
P N KGLP+RPG+ CP Y + G C+ G TC+++H
Sbjct: 42 ----------EPQCTLNDKGLPLRPGQAICPHYSRFGICRSGPTCKFDH 80
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 129 YPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPGEP 188
+P+RPGE +C+YY++T C CK+ HP + E + + LP RPG+
Sbjct: 6 FPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPS------EPQCTLNDKGLPLRPGQA 59
Query: 189 DCPYFLKTQRCKFGSKCKFNH 209
CP++ + C+ G CKF+H
Sbjct: 60 ICPHYSRFGICRSGPTCKFDH 80
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 46/113 (40%), Gaps = 38/113 (33%)
Query: 308 LPIRPGELDCPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPLITSPAASLGISVVS 367
P RPGE +C +YL+TG+C C+Y+HP
Sbjct: 6 FPERPGEPECSYYLRTGNCYLKQNCKYHHP------------------------------ 35
Query: 368 PAASLYQTIDPRLAQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHH 420
+ I P Q TL + P RPGQ C +Y + G+C+ G CKF H
Sbjct: 36 ------KNITPSEPQCTL--NDKGLPLRPGQAICPHYSRFGICRSGPTCKFDH 80
Score = 33.9 bits (76), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 437 LTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHP 471
++ P R G C YY++TG C CK+ HP
Sbjct: 1 MSEEKFPERPGEPECSYYLRTGNCYLKQNCKYHHP 35
>sp|Q9C7P1|C3H10_ARATH Putative zinc finger CCCH domain-containing protein 10
OS=Arabidopsis thaliana GN=At1g29600/At1g29610 PE=2 SV=2
Length = 389
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 33/154 (21%)
Query: 109 YSTNSLAKRPRIESASNLPVYPQRPGEKDCAYYMQTRTC-KFGDTCK--FDHPIWVPEGG 165
Y+ + L ++ R+ V +R E + + + RT + G + FD G
Sbjct: 67 YARDDLTQQQRVSDV----VMQRRSHETESRLWQRARTQDRRGSESRMMFD--------G 114
Query: 166 IPDWKEVPVIASSESLPERPGEPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDV 225
W PV++S+ P RPGE +C +++K C++GS+C +NHP
Sbjct: 115 RTQWSHAPVLSSA--YPVRPGEDNCLFYMKNHLCEWGSECCYNHP--------------- 157
Query: 226 SALPERPSEPPCAFYLKNGTCKFGATCKFDHPKD 259
L E P K G CK G+ C F+HPK+
Sbjct: 158 -PLQEIPCRIGKKLDCKAGACKRGSNCPFNHPKE 190
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 287 LLNPGMSLFSHAPAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHP 337
++ G + +SHAP + S P+RPGE +C FY+K C++GS C YNHP
Sbjct: 110 MMFDGRTQWSHAPVL---SSAYPVRPGEDNCLFYMKNHLCEWGSECCYNHP 157
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 23/87 (26%)
Query: 128 VYPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPGE 187
YP RPGE +C +YM+ C++G C ++HP P+ + +P R G+
Sbjct: 127 AYPVRPGEDNCLFYMKNHLCEWGSECCYNHP--------------PL----QEIPCRIGK 168
Query: 188 P-DCPYFLKTQRCKFGSKCKFNHPKDK 213
DC K CK GS C FNHPK++
Sbjct: 169 KLDC----KAGACKRGSNCPFNHPKER 191
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 21/86 (24%)
Query: 387 VSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRRE 446
V S YP RPG+ C +YMK +C++G +C ++HP P QE +P R
Sbjct: 123 VLSSAYPVRPGEDNCLFYMKNHLCEWGSECCYNHP--------PLQE--------IPCRI 166
Query: 447 G-AVHCPYYMKTGTCKYGATCKFDHP 471
G + C K G CK G+ C F+HP
Sbjct: 167 GKKLDC----KAGACKRGSNCPFNHP 188
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 45/113 (39%), Gaps = 49/113 (43%)
Query: 226 SALPERPSEPPCAFYLKNGTCKFGATCKFDHPKDFQLPSVGQENGIGEQNESVIKTDETT 285
SA P RP E C FY+KN C++G+ C ++HP ++P IG++
Sbjct: 126 SAYPVRPGEDNCLFYMKNHLCEWGSECCYNHPPLQEIPC-----RIGKK----------- 169
Query: 286 GLLNPGMSLFSHAPAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHPE 338
LDC K G+CK GS C +NHP+
Sbjct: 170 -----------------------------LDC----KAGACKRGSNCPFNHPK 189
Score = 38.1 bits (87), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 440 AGLPRREGAVHCPYYMKTGTCKYGATCKFDHPPPGEV 476
+ P R G +C +YMK C++G+ C ++HPP E+
Sbjct: 126 SAYPVRPGEDNCLFYMKNHLCEWGSECCYNHPPLQEI 162
>sp|Q9C7P4|C3H9_ARATH Putative zinc finger CCCH domain-containing protein 9
OS=Arabidopsis thaliana GN=At1g29570 PE=4 SV=1
Length = 321
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 297 HAPAMLHNSKGLPIRPGELDCPFYLKTGSCKYGSTCRYNHP 337
+ + S P+RPG+ DC FYLK G C+Y S+CR+NHP
Sbjct: 41 QSKERMRQSSPYPVRPGKKDCQFYLKNGLCRYRSSCRFNHP 81
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 392 YPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDR 424
YP RPG+ +C +Y+K G+C++ C+F+HP R
Sbjct: 52 YPVRPGKKDCQFYLKNGLCRYRSSCRFNHPTQR 84
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 229 PERPSEPPCAFYLKNGTCKFGATCKFDHP 257
P RP + C FYLKNG C++ ++C+F+HP
Sbjct: 53 PVRPGKKDCQFYLKNGLCRYRSSCRFNHP 81
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 7/46 (15%)
Query: 129 YPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPV 174
YP RPG+KDC +Y++ C++ +C+F+HP P+ E+PV
Sbjct: 52 YPVRPGKKDCQFYLKNGLCRYRSSCRFNHPTQRPQ-------ELPV 90
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 182 PERPGEPDCPYFLKTQRCKFGSKCKFNHP 210
P RPG+ DC ++LK C++ S C+FNHP
Sbjct: 53 PVRPGKKDCQFYLKNGLCRYRSSCRFNHP 81
Score = 40.8 bits (94), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 443 PRREGAVHCPYYMKTGTCKYGATCKFDHP 471
P R G C +Y+K G C+Y ++C+F+HP
Sbjct: 53 PVRPGKKDCQFYLKNGLCRYRSSCRFNHP 81
>sp|A3CEM4|C3H64_ORYSJ Putative zinc finger CCCH domain-containing protein 64 OS=Oryza
sativa subsp. japonica GN=Os12g0129500 PE=4 SV=2
Length = 527
Score = 49.3 bits (116), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 172 VPVIASSESLPERPGEPDCPYFLKTQRCKFGSKCKFNHPKDKL 214
+ ++ PERPGEP C Y++K CK + CK+NHPKD+
Sbjct: 201 ISLLGKLVQYPERPGEPFCRYYMKFGECKHMTFCKYNHPKDRF 243
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%)
Query: 392 YPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPS 431
YP+RPG+ C YYMK G CK CK++HP DR + KT +
Sbjct: 210 YPERPGEPFCRYYMKFGECKHMTFCKYNHPKDRFSCKTTN 249
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 223 GDVSALPERPSEPPCAFYLKNGTCKFGATCKFDHPKDFQLPSVGQENGIGEQNESVIKTD 282
G + PERP EP C +Y+K G CK CK++HPKD S N I ++ES+ D
Sbjct: 205 GKLVQYPERPGEPFCRYYMKFGECKHMTFCKYNHPKD--RFSCKTTNTI--RSESLCLHD 260
Query: 283 ETTGLLNPGMSLFSHAPAMLHNSKGL 308
+ T +L L S N+ L
Sbjct: 261 QQTTILENQFGLPSLVDKATANTTNL 286
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 16/151 (10%)
Query: 309 PIRPGELDCPFYLKTGSCKYGSTCRYNHP-ERTAINPPAAAIVHPLITSPAASLGISVVS 367
P RPGE C +Y+K G CK+ + C+YNHP +R + L + +++
Sbjct: 211 PERPGEPFCRYYMKFGECKHMTFCKYNHPKDRFSCKTTNTIRSESLCLHDQQT---TILE 267
Query: 368 PAASLYQTIDPRLAQATLGV---SPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDR 424
L +D A T V S S+ P G+ + + + VC GEK FH +
Sbjct: 268 NQFGLPSLVDKATANTTNLVASASSSMTPDEIGEGK-NNPDEVFVCICGEKLLFHTNFNT 326
Query: 425 SAAKTPSQETVKLTLAGLPRREGAVHCPYYM 455
+A K +L + L RR +C Y+
Sbjct: 327 TAVK-------ELVVFALQRR-NIKYCDIYV 349
Score = 40.4 bits (93), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%)
Query: 113 SLAKRPRIESASNLPVYPQRPGEKDCAYYMQTRTCKFGDTCKFDHP 158
++ K I L YP+RPGE C YYM+ CK CK++HP
Sbjct: 194 NVIKAGVISLLGKLVQYPERPGEPFCRYYMKFGECKHMTFCKYNHP 239
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 439 LAGLPRREGAVHCPYYMKTGTCKYGATCKFDHP 471
L P R G C YYMK G CK+ CK++HP
Sbjct: 207 LVQYPERPGEPFCRYYMKFGECKHMTFCKYNHP 239
>sp|Q69XQ3|C3H44_ORYSJ Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa
subsp. japonica GN=Os06g0618100 PE=2 SV=1
Length = 295
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 50/126 (39%), Gaps = 17/126 (13%)
Query: 103 GQSEAWYSTNSLAKRPRIESASNLPVYPQRPGEKDCAYYMQTRTCKFGDTCKFDHPI--- 159
G+ A TN AKR R +S + V + K C + T C FG +C F H
Sbjct: 6 GKRAAPEGTNGAAKRARASESSQVGVGSKL---KPCTKFFSTSGCPFGSSCHFLHNFPGG 62
Query: 160 WVPEGGIPDWKEVPVIASSESLPERPGEPD-----------CPYFLKTQRCKFGSKCKFN 208
+ + V A +P PG P+ C + + CK+GSKC F
Sbjct: 63 YQAAAKMTSHGGTAVAAPPGRMPLGPGAPNGPPTSSVKTRMCNKYNTAEGCKWGSKCHFA 122
Query: 209 HPKDKL 214
H + +L
Sbjct: 123 HGEREL 128
>sp|P0CS64|YTH1_CRYNJ mRNA 3'-end-processing protein YTH1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=YTH1 PE=3 SV=1
Length = 332
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 55/138 (39%), Gaps = 29/138 (21%)
Query: 138 CAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPGEPDCPYFLKTQ 197
C +Y++ CK GD C++ H + + +PV C +F+K
Sbjct: 99 CKHYLRN-LCKMGDNCEYTHDF--------NLRTMPV---------------CIWFVKQG 134
Query: 198 RCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSE----PPCAFYLKNGTCKFGATCK 253
+C+ G +C + HP+D+ + D G P P + C Y G C G CK
Sbjct: 135 KCELGGECLYFHPRDRRVECPDYNRGFCVLGPNCPRKHIRRRLCDAYAA-GFCPDGKDCK 193
Query: 254 FDHPKDFQLPSVGQENGI 271
HP + P+ N I
Sbjct: 194 LAHPSPNRPPAESYINPI 211
Score = 37.4 bits (85), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 32/83 (38%)
Query: 401 CDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKTGTC 460
C +++K G C+ G +C + HP DR + PR+ G C
Sbjct: 127 CIWFVKQGKCELGGECLYFHPRDRRVECPDYNRGFCVLGPNCPRKHIRRRLCDAYAAGFC 186
Query: 461 KYGATCKFDHPPPGEVMAISALD 483
G CK HP P A S ++
Sbjct: 187 PDGKDCKLAHPSPNRPPAESYIN 209
>sp|P0CS65|YTH1_CRYNB mRNA 3'-end-processing protein YTH1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=YTH1 PE=3 SV=1
Length = 332
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 55/138 (39%), Gaps = 29/138 (21%)
Query: 138 CAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPGEPDCPYFLKTQ 197
C +Y++ CK GD C++ H + + +PV C +F+K
Sbjct: 99 CKHYLRN-LCKMGDNCEYTHDF--------NLRTMPV---------------CIWFVKQG 134
Query: 198 RCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSE----PPCAFYLKNGTCKFGATCK 253
+C+ G +C + HP+D+ + D G P P + C Y G C G CK
Sbjct: 135 KCELGGECLYFHPRDRRVECPDYNRGFCVLGPNCPRKHIRRRLCDAYAA-GFCPDGKDCK 193
Query: 254 FDHPKDFQLPSVGQENGI 271
HP + P+ N I
Sbjct: 194 LAHPSPNRPPAESYINPI 211
Score = 37.4 bits (85), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 32/83 (38%)
Query: 401 CDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKTGTC 460
C +++K G C+ G +C + HP DR + PR+ G C
Sbjct: 127 CIWFVKQGKCELGGECLYFHPRDRRVECPDYNRGFCVLGPNCPRKHIRRRLCDAYAAGFC 186
Query: 461 KYGATCKFDHPPPGEVMAISALD 483
G CK HP P A S ++
Sbjct: 187 PDGKDCKLAHPSPNRPPAESYIN 209
>sp|Q9UPT8|ZC3H4_HUMAN Zinc finger CCCH domain-containing protein 4 OS=Homo sapiens
GN=ZC3H4 PE=1 SV=3
Length = 1303
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 47/114 (41%), Gaps = 17/114 (14%)
Query: 397 GQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHCPY--- 453
G++ C Y+++ G C +G+ C F H I+ + E K + G R A +CPY
Sbjct: 392 GKVICKYFVE-GRCTWGDHCNFSHDIELPKKR----ELCKFYITGFCAR--AENCPYMHG 444
Query: 454 ------YMKTGTCKYGATCKFDHPPPGEVMAISALDGTSTAVGEEVKGDEKESE 501
Y TG C G C F H P E LD E DEKE E
Sbjct: 445 DFPCKLYHTTGNCINGDDCMFSHDPLTEETR-ELLDKMLADDAEAGAEDEKEVE 497
Score = 35.8 bits (81), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 138 CAYYMQTRTCKFGDTCKFDHPIWVPEG-GIPDWKEVPVIASSESLPERPGEPDCPYFLKT 196
C Y+++ R C +GD C F H I +P+ + + A +E+ P G+ C + T
Sbjct: 396 CKYFVEGR-CTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTT 454
Query: 197 QRCKFGSKCKFNH 209
C G C F+H
Sbjct: 455 GNCINGDDCMFSH 467
>sp|Q6ZPZ3|ZC3H4_MOUSE Zinc finger CCCH domain-containing protein 4 OS=Mus musculus
GN=Zc3h4 PE=1 SV=2
Length = 1304
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 44/112 (39%), Gaps = 13/112 (11%)
Query: 397 GQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGL-------PRREGAV 449
G++ C Y+++ G C +G+ C F H I+ + E K + G P G
Sbjct: 391 GKVICKYFVE-GRCTWGDHCNFSHDIELPKKR----ELCKFYITGFCARAENCPYMHGDF 445
Query: 450 HCPYYMKTGTCKYGATCKFDHPPPGEVMAISALDGTSTAVGEEVKGDEKESE 501
C Y TG C G C F H P E LD E DEKE E
Sbjct: 446 PCKLYHTTGNCINGDDCMFSHDPLTEETR-ELLDKMLADDAEAGAEDEKEVE 496
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 138 CAYYMQTRTCKFGDTCKFDHPIWVPEG-GIPDWKEVPVIASSESLPERPGEPDCPYFLKT 196
C Y+++ R C +GD C F H I +P+ + + A +E+ P G+ C + T
Sbjct: 395 CKYFVEGR-CTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTT 453
Query: 197 QRCKFGSKCKFNH 209
C G C F+H
Sbjct: 454 GNCINGDDCMFSH 466
>sp|Q9TT91|MKRN1_MACEU E3 ubiquitin-protein ligase makorin-1 OS=Macropus eugenii GN=MKRN1
PE=2 SV=1
Length = 478
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 22/86 (25%)
Query: 398 QMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKT 457
Q+ C Y+M GVCK G C++ H + S + A+ C YY +
Sbjct: 54 QVTCRYFMH-GVCKKGNNCRYSHDLSTS--------------------QSAMVCRYYQR- 91
Query: 458 GTCKYGATCKFDHPPPGEVMAISALD 483
G C YG C+++H P + ++A +
Sbjct: 92 GCCAYGDRCRYEHTKPLKREEVTAAN 117
>sp|Q9LTS7|C3H65_ARATH Zinc finger CCCH domain-containing protein 65 OS=Arabidopsis
thaliana GN=EMB1789 PE=2 SV=1
Length = 675
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 47/130 (36%), Gaps = 45/130 (34%)
Query: 127 PVYPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPG 186
PV P+ K C +Y++ R C GD CKF H +++PE
Sbjct: 345 PVAPKPKPIKYCRHYLKGR-CHEGDKCKFSH---------------------DTIPETKC 382
Query: 187 EPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCAFYLKNGTC 246
P C YF TQ C G C F+H K PC ++ G C
Sbjct: 383 SP-CCYF-ATQSCMKGDDCPFDHDLSKY---------------------PCNNFITKGFC 419
Query: 247 KFGATCKFDH 256
G +C F H
Sbjct: 420 YRGDSCLFSH 429
>sp|Q1EHT7|C3H4_ORYSJ Zinc finger CCCH domain-containing protein 4 OS=Oryza sativa subsp.
japonica GN=Os01g0256800 PE=2 SV=1
Length = 1007
Score = 40.4 bits (93), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 32/90 (35%), Gaps = 24/90 (26%)
Query: 129 YPQRPGEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPGEP 188
Y Q E + + +C GDTC F H R P
Sbjct: 719 YVQPALENEMCVFFLNGSCNRGDTCHFSHS------------------------SRAPRP 754
Query: 189 DCPYFLKTQRCKFGSKCKFNHPKDKLIGSS 218
C +FL Q C+ G+ C F+H L+ SS
Sbjct: 755 ICKFFLTLQGCRNGNSCSFSHDSGSLVSSS 784
>sp|Q9H000|MKRN2_HUMAN Probable E3 ubiquitin-protein ligase makorin-2 OS=Homo sapiens
GN=MKRN2 PE=2 SV=2
Length = 416
Score = 40.4 bits (93), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 22/76 (28%)
Query: 398 QMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKT 457
Q+ C Y+M GVC+ G +C F H + S T C YY K
Sbjct: 5 QITCRYFMH-GVCREGSQCLFSHDLANSKPSTI--------------------CKYYQK- 42
Query: 458 GTCKYGATCKFDHPPP 473
G C YG C++DH P
Sbjct: 43 GYCAYGTRCRYDHTRP 58
Score = 33.5 bits (75), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 23/89 (25%)
Query: 190 CPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCAFYLKNGTCKFG 249
C YF+ C+ GS+C F+H D N S + C +Y K G C +G
Sbjct: 8 CRYFMHGV-CREGSQCLFSH---------DLANSKPSTI--------CKYYQK-GYCAYG 48
Query: 250 ATCKFDHPKDFQLPSVGQENGIGEQNESV 278
C++DH + PS +G SV
Sbjct: 49 TRCRYDHTR----PSAAAGGAVGTMAHSV 73
>sp|Q9ERV1|MKRN2_MOUSE Probable E3 ubiquitin-protein ligase makorin-2 OS=Mus musculus
GN=Mkrn2 PE=2 SV=2
Length = 416
Score = 40.0 bits (92), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 22/73 (30%)
Query: 398 QMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKT 457
Q+ C Y+M GVC+ G +C F H + S T C YY K
Sbjct: 5 QVTCRYFMH-GVCREGSQCLFSHDLANSKPSTI--------------------CKYYQK- 42
Query: 458 GTCKYGATCKFDH 470
G C YGA C++DH
Sbjct: 43 GYCAYGARCRYDH 55
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 75/219 (34%), Gaps = 77/219 (35%)
Query: 190 CPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCAFYLKNGTCKFG 249
C YF+ C+ GS+C F+H D N S + C +Y K G C +G
Sbjct: 8 CRYFMHGV-CREGSQCLFSH---------DLANSKPSTI--------CKYYQK-GYCAYG 48
Query: 250 ATCKFDHPKDFQL------------PSVG-------------------QENGIGEQNESV 278
A C++DH K PS G E G E+ V
Sbjct: 49 ARCRYDHTKPPAAAGGAVGPAPNPSPSSGLHSPHPSPDIATSVMRTHSNEPGKREKKTLV 108
Query: 279 IKTDETTGLL----------NP-GMSLFSHAPAMLHNSKGLPIRPGELD----------- 316
++ TGL NP G S +P M +S IR G D
Sbjct: 109 LRDRNLTGLAEDKTPPSKVNNPGGCSDPQTSPEMKPHSYLDAIRTGLDDLEASSSYSNEP 168
Query: 317 --CPFYLKTGSCKYGSTCRYNHPERTAINPPAAAIVHPL 353
CP Y G C++G C Y H + I ++HP
Sbjct: 169 QLCP-YAAAGECRFGDACVYLHGDMCEIC--RLQVLHPF 204
>sp|P41000|CPS3_SCHPO Protein cps3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cps3 PE=1 SV=3
Length = 583
Score = 40.0 bits (92), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 25/111 (22%)
Query: 381 AQATLGVSPSLYPQRPGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLA 440
++AT PS P+ + C ++ + G C G+ C F H ++ + KT
Sbjct: 23 SEATSLTRPS--PKSLQHVPCKFF-RQGTCTSGKNCIFSHDLELATEKTI---------- 69
Query: 441 GLPRREGAVHCPYYMKTGTCKYGATCKFDHP-PPGEVMAISALDGTSTAVG 490
C Y+ K G CK+G+ C +H P G + A ++TA+G
Sbjct: 70 ----------CKYFQK-GNCKFGSKCALEHVLPDGRKVKTRAFAPSTTAMG 109
>sp|Q6K687|C3H18_ORYSJ Zinc finger CCCH domain-containing protein 18 OS=Oryza sativa
subsp. japonica GN=Os02g0793000 PE=2 SV=1
Length = 504
Score = 40.0 bits (92), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 194 LKTQRCKFGSKCKFNHPKDK-----LIGSSDSGNGDVSAL-PERPSEPPCAFYLKNGTCK 247
L+ Q GSKC+F H + +IG S + +S L P + C F+L+ C+
Sbjct: 103 LEPQEFSVGSKCRFRHKDGRWYNGCVIGLEGSSDARISFLTPTSENMSMCKFFLQQ-RCR 161
Query: 248 FGATCKFDH 256
FG+ C+ H
Sbjct: 162 FGSNCRLSH 170
>sp|Q8BYK8|ZC3H6_MOUSE Zinc finger CCCH domain-containing protein 6 OS=Mus musculus
GN=Zc3h6 PE=2 SV=2
Length = 1177
Score = 40.0 bits (92), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 44/123 (35%), Gaps = 47/123 (38%)
Query: 134 GEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPGEPDCPYF 193
G++ C Y+++ R C GD CKF+H + + KEV C Y+
Sbjct: 272 GKQICKYFLEGR-CIKGDHCKFNH-----DAELEKKKEV-----------------CKYY 308
Query: 194 LKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCAFYLKNGTCKFGATCK 253
L+ C G C + H SE PC FY C G CK
Sbjct: 309 LQGY-CTKGENCIYMH-----------------------SEFPCKFYHSGAKCYQGDKCK 344
Query: 254 FDH 256
F H
Sbjct: 345 FSH 347
Score = 35.8 bits (81), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 12/81 (14%)
Query: 397 GQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGL-PRREGAVH----- 450
G+ C Y+++ G C G+ CKF+H + K E K L G + E ++
Sbjct: 272 GKQICKYFLE-GRCIKGDHCKFNHDAELEKKK----EVCKYYLQGYCTKGENCIYMHSEF 326
Query: 451 -CPYYMKTGTCKYGATCKFDH 470
C +Y C G CKF H
Sbjct: 327 PCKFYHSGAKCYQGDKCKFSH 347
>sp|Q4WRX4|DUS3_ASPFU tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=dus3 PE=3 SV=1
Length = 726
Score = 40.0 bits (92), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 10/59 (16%)
Query: 410 CKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKF 468
CKFGEKC+F H + R+ K +E + T G+ CP + G C YG C+
Sbjct: 141 CKFGEKCRFEHDV-RTYLKEHKREDL-TTFGGI--------CPIWDAKGRCPYGFKCRL 189
>sp|A1D1U0|DUS3_NEOFI tRNA-dihydrouridine(47) synthase [NAD(P)(+)] OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 /
NRRL 181) GN=dus3 PE=3 SV=1
Length = 726
Score = 40.0 bits (92), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 10/59 (16%)
Query: 410 CKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKF 468
CKFGEKC+F H + R+ K +E + T G+ CP + G C YG C+
Sbjct: 141 CKFGEKCRFEHDV-RTYLKEHKREDL-TTFGGI--------CPIWDAKGRCPYGFKCRL 189
>sp|P61129|ZC3H6_HUMAN Zinc finger CCCH domain-containing protein 6 OS=Homo sapiens
GN=ZC3H6 PE=2 SV=2
Length = 1189
Score = 39.7 bits (91), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 44/123 (35%), Gaps = 47/123 (38%)
Query: 134 GEKDCAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPGEPDCPYF 193
G++ C Y+++ R C GD CKFDH + + KE+ C ++
Sbjct: 274 GKQICKYFLEGR-CIKGDQCKFDH-----DAELEKRKEI-----------------CKFY 310
Query: 194 LKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCAFYLKNGTCKFGATCK 253
L+ C G C + H +E PC FY C G CK
Sbjct: 311 LQG-YCTKGENCIYMH-----------------------NEFPCKFYHSGAKCYQGDNCK 346
Query: 254 FDH 256
F H
Sbjct: 347 FSH 349
Score = 36.6 bits (83), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 12/81 (14%)
Query: 397 GQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGL-PRREGAVH----- 450
G+ C Y+++ G C G++CKF H + K E K L G + E ++
Sbjct: 274 GKQICKYFLE-GRCIKGDQCKFDHDAELEKRK----EICKFYLQGYCTKGENCIYMHNEF 328
Query: 451 -CPYYMKTGTCKYGATCKFDH 470
C +Y C G CKF H
Sbjct: 329 PCKFYHSGAKCYQGDNCKFSH 349
>sp|Q9QXP6|MKRN1_MOUSE E3 ubiquitin-protein ligase makorin-1 OS=Mus musculus GN=Mkrn1 PE=2
SV=1
Length = 481
Score = 39.3 bits (90), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 22/86 (25%)
Query: 398 QMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKT 457
Q+ C Y+M GVCK G+ C++ H + S V C Y+ +
Sbjct: 58 QVTCRYFMH-GVCKEGDNCRYSHDLSDSPY--------------------GVVCKYFQR- 95
Query: 458 GTCKYGATCKFDHPPPGEVMAISALD 483
G C YG C+++H P + ++A D
Sbjct: 96 GYCVYGDRCRYEHSKPLKQEEVTATD 121
>sp|Q9DD48|MKRN2_SERQU Probable E3 ubiquitin-protein ligase makorin-2 OS=Seriola
quinqueradiata GN=mkrn2 PE=2 SV=1
Length = 423
Score = 39.3 bits (90), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 22/76 (28%)
Query: 398 QMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKT 457
Q+ C Y++ GVC+ G +C F H ++ S T C +Y +
Sbjct: 5 QVTCRYFLH-GVCREGSRCLFSHDLNNSKPSTI--------------------CKFYQR- 42
Query: 458 GTCKYGATCKFDHPPP 473
G C YG C++DH P
Sbjct: 43 GVCAYGERCRYDHIKP 58
Score = 34.7 bits (78), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 19/69 (27%)
Query: 190 CPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCAFYLKNGTCKFG 249
C YFL C+ GS+C F+H D N S + C FY + G C +G
Sbjct: 8 CRYFLHGV-CREGSRCLFSH---------DLNNSKPSTI--------CKFY-QRGVCAYG 48
Query: 250 ATCKFDHPK 258
C++DH K
Sbjct: 49 ERCRYDHIK 57
>sp|Q9SK49|C3H22_ARATH Zinc finger CCCH domain-containing protein 22 OS=Arabidopsis
thaliana GN=At2g24830 PE=2 SV=1
Length = 497
Score = 38.9 bits (89), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 202 GSKCKFNHP-----KDKLIGSSDSGNGDVSAL-PERPSEPPCAFYLKNGTCKFGATCKFD 255
GSKC+F H ++IG S + +S L P S C F+++ C+FG++C+
Sbjct: 101 GSKCRFRHTDGRWYNGRIIGFEGSDSAKISFLTPTSESMMICKFFMQQ-RCRFGSSCRSS 159
Query: 256 HPKDFQLPSV 265
H D + S+
Sbjct: 160 HGLDVPISSL 169
>sp|Q9DFG8|MKRN2_DANRE Probable E3 ubiquitin-protein ligase makorin-2 OS=Danio rerio
GN=mkrn2 PE=2 SV=2
Length = 414
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 23/78 (29%)
Query: 398 QMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKT 457
Q+ C Y++ GVC+ G +C F H + S T C YY +
Sbjct: 5 QVTCRYFLH-GVCREGSRCLFSHDLTTSKPSTI--------------------CKYYQR- 42
Query: 458 GTCKYGATCKFDH-PPPG 474
G C YG C++DH PPG
Sbjct: 43 GACAYGDRCRYDHIKPPG 60
>sp|P53781|TTP_BOVIN Tristetraprolin OS=Bos taurus GN=ZFP36 PE=2 SV=1
Length = 324
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 16/80 (20%)
Query: 401 CDYYMKTGVCKFGEKCKFHHPID--RSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKTG 458
C + ++G C++G KC+F H + R A++ P +T C + G
Sbjct: 107 CRTFSESGRCRYGAKCQFAHGLGELRQASRHPKYKTEL--------------CHKFYLQG 152
Query: 459 TCKYGATCKFDHPPPGEVMA 478
C YG+ C F H P ++ A
Sbjct: 153 RCPYGSRCHFIHNPSEDLAA 172
Score = 37.0 bits (84), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 9/67 (13%)
Query: 190 CPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCAFYLKNGTCKFG 249
C F ++ RC++G+KC+F H +L S P+ +E FYL+ G C +G
Sbjct: 107 CRTFSESGRCRYGAKCQFAHGLGELR--------QASRHPKYKTELCHKFYLQ-GRCPYG 157
Query: 250 ATCKFDH 256
+ C F H
Sbjct: 158 SRCHFIH 164
>sp|Q7JWR9|ZC3HF_DROME Zinc finger CCCH domain-containing protein 15 homolog OS=Drosophila
melanogaster GN=CG8635 PE=1 SV=1
Length = 404
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 55/150 (36%), Gaps = 29/150 (19%)
Query: 232 PSEPPCAFYLKNGTCKFGATCKFDHPKDFQLPSVGQENGIGEQNESVIKTDETTGLLNPG 291
P CAF+ K GTC G CKF H + QEN + +++ V DE + N
Sbjct: 95 PKSVVCAFF-KQGTCTKGDKCKFSH-------DLSQENKVEKRSIYVDMRDEDDPMTNWD 146
Query: 292 MSLFSHAPAMLHNSKGLPIRP-GELDCPFYLKT---------GSCKYGSTCRYNHP---- 337
+ + S G RP ++ C F+L+ C G C Y H
Sbjct: 147 DAKLKE--VVEKKSSGEKQRPTTDIICKFFLEAVEKSKYGWFWECPNGGKCIYRHALPAG 204
Query: 338 -----ERTAINPPAAAIVHPLITSPAASLG 362
++ P + LI A+LG
Sbjct: 205 YVLKRDKKKEEKPTEISLVDLIEKERAALG 234
>sp|O74463|YQC1_SCHPO Uncharacterized protein C1739.01 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC1739.01 PE=1 SV=2
Length = 547
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 27/103 (26%)
Query: 401 CDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKTGTC 460
C ++ + G C GE C F H ++ ++ + C Y++K G C
Sbjct: 47 CKFF-RNGTCTAGENCPFSHSLE-------TERPI---------------CKYFLK-GNC 82
Query: 461 KYGATCKFDHPPPGEVMAISALDGTSTAVGEEVKGDEKESEVA 503
K+G C H PG + +GTST + + S VA
Sbjct: 83 KFGPKCALSHALPGNT---NLPNGTSTNTMASMAANGGASSVA 122
Score = 33.9 bits (76), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 28/72 (38%), Gaps = 26/72 (36%)
Query: 138 CAYYMQTRTCKFGDTCKFDHPIWVPEGGIPDWKEVPVIASSESLPERPGEPDCPYFLKTQ 197
C ++ + TC G+ C F H + ER P C YFLK
Sbjct: 47 CKFF-RNGTCTAGENCPFSHSLET---------------------ER---PICKYFLKGN 81
Query: 198 RCKFGSKCKFNH 209
CKFG KC +H
Sbjct: 82 -CKFGPKCALSH 92
Score = 33.1 bits (74), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 31/82 (37%), Gaps = 22/82 (26%)
Query: 193 FLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCAFYLKNGTCKFGATC 252
F + C G C F+H S ERP C ++LK G CKFG C
Sbjct: 49 FFRNGTCTAGENCPFSH----------------SLETERPI---CKYFLK-GNCKFGPKC 88
Query: 253 KFDH--PKDFQLPSVGQENGIG 272
H P + LP+ N +
Sbjct: 89 ALSHALPGNTNLPNGTSTNTMA 110
>sp|B0F0H3|MKRN2_XENLA Probable E3 ubiquitin-protein ligase makorin-2 OS=Xenopus laevis
GN=mkrn2 PE=2 SV=2
Length = 409
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 22/78 (28%)
Query: 396 PGQMECDYYMKTGVCKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHCPYYM 455
P Q+ C Y++ GVC+ G +C F H + A PS TV C +++
Sbjct: 3 PKQVTCRYFLH-GVCREGSRCLFSHDL---ATSKPS--TV---------------CRFFL 41
Query: 456 KTGTCKYGATCKFDHPPP 473
+ G C YG C++DH P
Sbjct: 42 R-GQCAYGTRCRYDHVKP 58
Score = 33.5 bits (75), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 19/74 (25%)
Query: 185 PGEPDCPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCAFYLKNG 244
P + C YFL C+ GS+C F+H D S + C F+L+ G
Sbjct: 3 PKQVTCRYFLHGV-CREGSRCLFSH---------DLATSKPSTV--------CRFFLR-G 43
Query: 245 TCKFGATCKFDHPK 258
C +G C++DH K
Sbjct: 44 QCAYGTRCRYDHVK 57
>sp|P22893|TTP_MOUSE Tristetraprolin OS=Mus musculus GN=Zfp36 PE=1 SV=1
Length = 319
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 16/74 (21%)
Query: 401 CDYYMKTGVCKFGEKCKFHHPID--RSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKTG 458
C Y ++G C++G KC+F H + R A + P +T C + G
Sbjct: 101 CRTYSESGRCRYGAKCQFAHGLGELRQANRHPKYKTEL--------------CHKFYLQG 146
Query: 459 TCKYGATCKFDHPP 472
C YG+ C F H P
Sbjct: 147 RCPYGSRCHFIHNP 160
Score = 35.8 bits (81), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 11/76 (14%)
Query: 190 CPYFLKTQRCKFGSKCKFNHPKDKLIGSSDSGNGDVSALPERPSEPPCAFYLKNGTCKFG 249
C + ++ RC++G+KC+F H +L + P+ +E FYL+ G C +G
Sbjct: 101 CRTYSESGRCRYGAKCQFAHGLGELR--------QANRHPKYKTELCHKFYLQ-GRCPYG 151
Query: 250 ATCKFDH--PKDFQLP 263
+ C F H +D LP
Sbjct: 152 SRCHFIHNPTEDLALP 167
>sp|Q7XT07|DUS3L_ORYSJ tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like OS=Oryza sativa
subsp. japonica GN=Os04g0117600 PE=2 SV=2
Length = 685
Score = 38.1 bits (87), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 14/59 (23%)
Query: 410 CKFGEKCKFHHPIDRSAAKTPSQETVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKF 468
CK+G+ C+F H ID A+ P+ EG CP+ C YG TC+F
Sbjct: 105 CKYGDSCRFSHDIDAYLAQKPAD------------LEGT--CPFTNLDQLCPYGLTCRF 149
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.133 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 216,819,273
Number of Sequences: 539616
Number of extensions: 9779542
Number of successful extensions: 22332
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 160
Number of HSP's that attempted gapping in prelim test: 20339
Number of HSP's gapped (non-prelim): 1523
length of query: 508
length of database: 191,569,459
effective HSP length: 122
effective length of query: 386
effective length of database: 125,736,307
effective search space: 48534214502
effective search space used: 48534214502
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)