BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 040943
         (950 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P0CB23|Y4862_ARATH Uncharacterized protein At4g38062 OS=Arabidopsis thaliana
           GN=At4g38062 PE=2 SV=1
          Length = 1050

 Score =  490 bits (1261), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 289/569 (50%), Positives = 413/569 (72%), Gaps = 17/569 (2%)

Query: 1   MERIYEELDEIKAENEKLRADCKSKSELCGNLKKAHNEHLLKIQEANLKVEKQARELNEK 60
           ME++YEELDE+KA NEKLR D ++K+EL  NLKK  NE L++I+EA L  EK   E+ EK
Sbjct: 1   MEKVYEELDEVKAVNEKLRIDYRNKTELLENLKKVQNEQLIEIREARLVNEKHGFEIEEK 60

Query: 61  TEEISEVKQLFEGLKRSLTEKESIIKCLGAANDKLRFDFNEKCRKLEEQNRVLVLALDEA 120
           + EI+E+K+  E L+R L EK+S++K +   NDKLR +  +K R+ EE+ R ++  LDEA
Sbjct: 61  SREIAELKRANEELQRCLREKDSVVKRVNDVNDKLRANGEDKYREFEEEKRNMMSGLDEA 120

Query: 121 NEKNIDQEQKVNVFKAEIEGLKGLLSASQKKCVKAESEAKAPKKLRERDDMLLKLEDENS 180
           +EKNID EQK NV++AEIEGLKGLL+ ++ K ++AE   K  K++R RDD+++K+E+E S
Sbjct: 121 SEKNIDLEQKNNVYRAEIEGLKGLLAVAETKRIEAEKTVKGMKEMRGRDDVVVKMEEEKS 180

Query: 181 KFENQLKWKKEQFKHLEEAHEKLKDQFRTCKKEWEHERSTLLDAISSLQTSLDSQTRISG 240
           + E +LKWKKEQFKHLEEA+EKLK+ F+  KKEWE E+S LLD I SLQT LDS TRIS 
Sbjct: 181 QVEEKLKWKKEQFKHLEEAYEKLKNLFKDSKKEWEEEKSKLLDEIYSLQTKLDSVTRISE 240

Query: 241 DLQNRLQLCNQALSHEESRRKYLEVQVSEFRTHYDNTFAEYQDAKSQLECLTNQRDKEIA 300
           DLQ +LQ+CN AL+ EE+RRK+LE+QVSEF+  Y++ FAE QDA++QL+ L  +RD E+A
Sbjct: 241 DLQKKLQMCNGALTQEETRRKHLEIQVSEFKAKYEDAFAECQDARTQLDDLAGKRDWEVA 300

Query: 301 ALRHSLGTKETFYKEMEYQATKLERENQELLMSLKELQEAQIQKAGSSSSLAKLRNKLRS 360
            LR +L  K+ ++KEM+Y+  KLE+EN+ELL SLKELQEA IQ +G +S+L+KL+NK R+
Sbjct: 301 ELRQTLSMKDAYFKEMKYENGKLEQENRELLGSLKELQEATIQGSG-NSALSKLKNKFRN 359

Query: 361 VEQMHRDCSANLRAKEAEWSSQMQQMDAEMNGYRSELERKDAALKELKMELEDYHSLTLQ 420
           +E +H++CSANLR+KEAEWSSQ+++M  E+N Y+ +L+ K+AALKE+++ELE+  S T +
Sbjct: 360 LENIHKNCSANLRSKEAEWSSQVEKMVEEINDYKLQLQSKEAALKEVELELENCRSSTAK 419

Query: 421 LKMQNEEISVMLLELENDQEMLEKSLRCQRHLEEQAKQIESDSER----------KLGEV 470
           +++Q EEIS+M L L   + + E   R     ++Q K    D +R          +L + 
Sbjct: 420 MRLQYEEISIMFLVL--SRTVSEAQSRLANAKDKQIK----DEKREGNCYSLLMEQLDQK 473

Query: 471 SNALDIANLELAKEREKTASLSEVVESLDHIEEQRVLMEKELQKNKEKLEEASRYQLCIE 530
           + AL  A +E+ +ERE  A L + +E LD  E Q + M+KE+++ KE +EE+SR+Q  ++
Sbjct: 474 NAALAKAQMEIKEERESVACLLKRIEMLDLFENQNIQMQKEVERFKEMVEESSRFQTQMQ 533

Query: 531 EKAKQMESDSKRKLQEATDALDIANSELA 559
           EK K+ E+D + KL +  DALD  N +L 
Sbjct: 534 EKMKEAENDYEEKLLQVCDALDNTNIDLV 562



 Score =  303 bits (775), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 219/525 (41%), Positives = 310/525 (59%), Gaps = 69/525 (13%)

Query: 430  VMLLELENDQEMLEKSLRCQRHLEEQAKQIESDSERKLGEVSNALDIANLELAKEREKTA 489
            VM  E +  +EMLE+S +C+  LEEQ  Q+ESDS   + E+ + +DIA  +LA+E EKTA
Sbjct: 587  VMEKETQEYKEMLEESEKCRVLLEEQISQLESDSNENIRELCSKVDIAYAKLAEEVEKTA 646

Query: 490  SLSEVVESLDHIEEQRVLMEKELQKNKEKLEEASRYQLCIEEKAKQMESDSKRKLQEATD 549
            SL    ES+D  EE R   ++EL   KE LEE+++ QL ++EK   +E+DSKRKL + ++
Sbjct: 647  SLVRKSESIDLNEEHR---QRELDHYKEMLEESTKTQLLLQEKVVDVENDSKRKLADVSE 703

Query: 550  ALDIANSELAEKTSEGHQIEFELWIWKSIAERLKFELEENQELRKELEASLLAQVEVGEV 609
            AL+IANSEL++KTSE  QIEF+LW+WKSIA+RLK ELE+NQ LRK +EASLL QV VGE 
Sbjct: 704  ALEIANSELSDKTSEVFQIEFQLWVWKSIAKRLKAELEQNQNLRKRVEASLLEQVGVGEA 763

Query: 610  IKQENCGLTHSLEERDSRISKFQQQILSLEQDLKLKALEAASNARMETAMSFEIEKQRFS 669
            IKQE   L H                       KLK +  A ++  E   S         
Sbjct: 764  IKQEKNELVH-----------------------KLKVISHARSSDSEKKES--------- 791

Query: 670  QITKEKDEILEDLQRQIGWLEEESLRRELESSLLTQICAERSFEHEKESLIQLLEEKNQK 729
             + ++KDE+LE LQR++  LE++SLRRELE  +L  +  ER  ++E+E  I  L++K+Q 
Sbjct: 792  -LMRDKDEMLESLQREVELLEQDSLRRELEDVVLAHMIGERELQNERE--ICALQQKDQ- 847

Query: 730  IDDLLQLVRSLEERFNSSLNSFSSQLAGKQAEISLAIEAWEKISAAETLAMLEIEEKKLM 789
              DL ++   LE     SL S S  L  KQ E+++  + WEK++A + L  +E E KK+M
Sbjct: 848  --DLCEVKHELE----GSLKSVSLLLQQKQNEVNMLRKTWEKLTARQILTAVETESKKMM 901

Query: 790  IVELEDEISNVQQKLELQEKSLSHSKHQAQKIEAELALKQREMKNLTNQLEENLTTSDAL 849
            I+ELE EIS++ QKLE   +S+S  + +A K  AEL  KQ E+K +T Q++E L TS+A 
Sbjct: 902  IIELEGEISSLSQKLETSNESVSCFRQEATKSRAELETKQTELKEVTTQMQEKLRTSEA- 960

Query: 850  VIELRSENRKLLEDVLKLSSERENLLGFLGGLGDRVSKFSDEDMQLMEMLGRLVQSLDSK 909
                  E  +L+++V  LS+E+ NLL F+  + D + K  D D +LM+ L R+ Q  D  
Sbjct: 961  ------EKTELVKEVASLSTEKRNLLSFISEMEDGMLKLYDGDTKLMKTLERVTQCCDGF 1014

Query: 910  SGLVLKGDDLFESVKENVNAH----PSPATMKKVNTSLEERSPFK 950
                          KEN N      P  A   + +   E+RSPF+
Sbjct: 1015 G-------------KENNNGETIGSPRLAMKHEEDVVTEDRSPFR 1046


>sp|Q05870|MYSP_SCHJA Paramyosin OS=Schistosoma japonicum PE=2 SV=2
          Length = 866

 Score = 33.9 bits (76), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 111/231 (48%), Gaps = 41/231 (17%)

Query: 256 EESRRKY-LEVQVSEFRTHYDNTFAEYQDAKSQLECLTNQRDK---EIAALRHSLGTKET 311
           +ESR ++ L+ Q++  +  YDN  A+Y +   +   L NQ  K   +IAAL      K  
Sbjct: 237 DESRNRFNLQAQLTSLQMDYDNLQAKYDEESEEASNLRNQVSKFNADIAAL------KSK 290

Query: 312 FYKEMEYQATKLERENQELLMSLKELQEAQIQKAGSSSSLAKLRNKLR-SVEQMHRDC-S 369
           F +E+  +  + E   ++L M + EL++   ++   + SL KL+ KL   ++ +  +  S
Sbjct: 291 FERELMSKTEEFEEMKRKLTMRITELEDVAERERLKAVSLEKLKTKLTLEIKDLQSEIES 350

Query: 370 ANL-------RAKEAEWSSQMQQMDAEMNGYRSELERKDAALKELKMELEDYHSLTLQLK 422
            +L       RAK AE                SEL+R+   + EL +E+    S   QL+
Sbjct: 351 LSLENGELIRRAKSAE-------------SLASELQRR---VDELTIEVNTLTSQNNQLE 394

Query: 423 MQNEEISVMLLELENDQEMLEKSLRCQRHLEEQAKQIES---DSERKLGEV 470
            +N  +  ++ +L +    LE   R  R + +Q K+++S   D+ R+L ++
Sbjct: 395 SENMRLKSLVNDLTDKNNALE---RENRQMNDQVKELKSSLRDANRRLTDL 442


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.309    0.125    0.323 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 301,912,053
Number of Sequences: 539616
Number of extensions: 12321531
Number of successful extensions: 114581
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 4387
Number of HSP's that attempted gapping in prelim test: 70705
Number of HSP's gapped (non-prelim): 22052
length of query: 950
length of database: 191,569,459
effective HSP length: 127
effective length of query: 823
effective length of database: 123,038,227
effective search space: 101260460821
effective search space used: 101260460821
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 66 (30.0 bits)