Query 040944
Match_columns 188
No_of_seqs 133 out of 212
Neff 3.5
Searched_HMMs 29240
Date Mon Mar 25 21:45:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040944.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040944hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gyi_A RIO2 kinase; protein ki 99.9 8.8E-28 3E-32 216.1 4.4 104 1-118 2-129 (397)
2 1zar_A RIO2 kinase; serine kin 99.7 2.3E-18 8E-23 142.9 3.5 101 3-118 2-124 (282)
3 2x4h_A Hypothetical protein SS 86.3 0.3 1E-05 35.3 1.8 64 7-88 7-71 (139)
4 1zth_A RIO1 serine protein kin 81.1 0.51 1.8E-05 37.7 1.3 28 90-117 50-83 (258)
5 2dk5_A DNA-directed RNA polyme 78.6 0.72 2.5E-05 33.3 1.3 57 5-75 12-69 (91)
6 3tgn_A ADC operon repressor AD 78.5 0.86 2.9E-05 32.5 1.7 49 10-75 35-84 (146)
7 1i1g_A Transcriptional regulat 78.2 1.2 4.1E-05 32.4 2.4 62 11-88 2-65 (141)
8 2fbh_A Transcriptional regulat 77.2 1.7 5.8E-05 30.7 2.9 51 10-75 34-85 (146)
9 3i4p_A Transcriptional regulat 77.1 1.1 3.7E-05 34.2 2.0 62 11-88 1-64 (162)
10 3hmm_A TGF-beta receptor type- 75.6 0.82 2.8E-05 37.9 1.0 27 91-117 7-35 (303)
11 2fa5_A Transcriptional regulat 74.8 1.4 4.6E-05 32.1 1.9 50 10-75 46-96 (162)
12 3ech_A MEXR, multidrug resista 74.6 1.5 5.1E-05 31.4 2.1 50 10-75 34-84 (142)
13 3oop_A LIN2960 protein; protei 74.4 1.2 4.1E-05 31.8 1.5 50 10-75 34-84 (143)
14 1on2_A Transcriptional regulat 74.3 0.81 2.8E-05 33.2 0.6 61 11-88 2-63 (142)
15 3omv_A RAF proto-oncogene seri 73.8 1.6 5.4E-05 37.0 2.3 29 89-117 38-67 (307)
16 3kp7_A Transcriptional regulat 73.8 1.2 4.3E-05 32.2 1.5 48 10-74 35-83 (151)
17 3bja_A Transcriptional regulat 73.5 2.2 7.4E-05 29.9 2.7 50 10-75 30-80 (139)
18 2dbb_A Putative HTH-type trans 73.1 1.3 4.6E-05 32.8 1.5 51 8-74 4-55 (151)
19 4hbl_A Transcriptional regulat 73.0 1.4 4.8E-05 32.0 1.6 50 10-75 38-88 (149)
20 2cfx_A HTH-type transcriptiona 72.4 1.5 5.1E-05 32.5 1.6 48 11-74 3-51 (144)
21 4fih_A Serine/threonine-protei 72.2 1.7 5.9E-05 37.7 2.2 27 91-117 78-108 (346)
22 3g3z_A NMB1585, transcriptiona 71.8 2.3 7.9E-05 30.4 2.5 50 10-75 28-78 (145)
23 2pn6_A ST1022, 150AA long hypo 71.6 1.2 4.2E-05 32.8 1.0 49 11-75 1-50 (150)
24 2frh_A SARA, staphylococcal ac 71.5 1.4 4.9E-05 31.8 1.3 52 10-75 34-86 (127)
25 3hyh_A Carbon catabolite-derep 71.3 0.96 3.3E-05 37.8 0.4 28 90-117 16-47 (275)
26 3fm5_A Transcriptional regulat 70.3 1.9 6.6E-05 31.1 1.8 51 10-75 36-87 (150)
27 3s2w_A Transcriptional regulat 70.1 2.1 7.3E-05 31.3 2.0 50 10-75 47-97 (159)
28 2izr_A Casein kinase I isoform 69.6 2.7 9.4E-05 33.8 2.7 26 91-116 13-42 (330)
29 3cdh_A Transcriptional regulat 69.0 2.5 8.6E-05 30.5 2.2 50 10-75 40-90 (155)
30 1tbx_A ORF F-93, hypothetical 68.9 1.7 5.9E-05 29.8 1.2 61 10-88 5-70 (99)
31 3k2z_A LEXA repressor; winged 67.9 1.5 5.1E-05 34.3 0.8 64 10-88 2-67 (196)
32 3k0l_A Repressor protein; heli 67.8 3 0.0001 30.6 2.4 50 10-75 43-93 (162)
33 2ia0_A Putative HTH-type trans 67.7 2.1 7.1E-05 33.2 1.6 53 6-74 10-63 (171)
34 2gxg_A 146AA long hypothetical 67.6 2.1 7.2E-05 30.3 1.5 49 10-75 34-83 (146)
35 2w25_A Probable transcriptiona 67.2 2.1 7.2E-05 31.7 1.5 49 10-74 4-53 (150)
36 2p5v_A Transcriptional regulat 67.1 2.2 7.5E-05 32.1 1.6 50 9-74 6-56 (162)
37 4hgt_A Casein kinase I isoform 66.8 2.1 7.3E-05 33.1 1.5 26 90-115 12-41 (296)
38 2nyx_A Probable transcriptiona 66.7 2.3 7.8E-05 31.7 1.6 50 10-75 42-92 (168)
39 2cyy_A Putative HTH-type trans 66.1 2.5 8.5E-05 31.4 1.7 49 10-74 4-53 (151)
40 2cg4_A Regulatory protein ASNC 66.0 2.3 8E-05 31.5 1.5 49 10-74 5-54 (152)
41 3hsr_A HTH-type transcriptiona 65.6 1.7 6E-05 31.2 0.7 50 10-75 33-83 (140)
42 3nrv_A Putative transcriptiona 65.5 2 6.7E-05 30.8 1.0 50 10-75 37-87 (148)
43 2vn2_A DNAD, chromosome replic 65.4 2.3 7.8E-05 31.6 1.4 54 10-75 29-84 (128)
44 2heo_A Z-DNA binding protein 1 64.9 2.2 7.5E-05 28.6 1.1 50 10-74 7-57 (67)
45 3e6m_A MARR family transcripti 64.5 2.5 8.4E-05 31.1 1.4 50 10-75 50-100 (161)
46 4fie_A Serine/threonine-protei 64.4 2.7 9.2E-05 37.6 1.9 27 91-117 155-185 (423)
47 2a61_A Transcriptional regulat 64.4 2.4 8.3E-05 30.0 1.3 50 10-75 30-80 (145)
48 3boq_A Transcriptional regulat 64.3 3.3 0.00011 30.0 2.0 51 10-75 44-95 (160)
49 3bpv_A Transcriptional regulat 63.9 2.8 9.5E-05 29.4 1.5 50 10-75 26-76 (138)
50 3f3x_A Transcriptional regulat 63.6 2.3 7.8E-05 30.4 1.0 49 10-75 34-83 (144)
51 2qww_A Transcriptional regulat 63.4 4.4 0.00015 29.1 2.5 49 10-74 38-87 (154)
52 3eco_A MEPR; mutlidrug efflux 63.1 3.4 0.00011 29.2 1.8 52 10-75 28-80 (139)
53 3hrs_A Metalloregulator SCAR; 62.9 3.7 0.00013 32.8 2.2 53 19-88 8-61 (214)
54 3jw4_A Transcriptional regulat 62.9 3 0.0001 30.0 1.5 52 10-75 38-90 (148)
55 3deu_A Transcriptional regulat 62.6 3.3 0.00011 31.0 1.8 51 10-75 50-101 (166)
56 3nqo_A MARR-family transcripti 62.3 4 0.00014 31.2 2.3 55 7-75 35-90 (189)
57 3bj6_A Transcriptional regulat 61.9 4.6 0.00016 28.8 2.4 50 10-75 37-87 (152)
58 1lj9_A Transcriptional regulat 61.5 4.4 0.00015 28.6 2.2 50 10-75 26-76 (144)
59 2rdp_A Putative transcriptiona 61.0 3.1 0.00011 29.7 1.3 50 10-75 39-89 (150)
60 2e1c_A Putative HTH-type trans 60.4 3.6 0.00012 31.9 1.7 50 10-75 24-74 (171)
61 3uzp_A CKI-delta, CKID, casein 59.9 2.8 9.4E-05 32.6 1.0 26 90-115 12-41 (296)
62 3a99_A Proto-oncogene serine/t 59.9 6.7 0.00023 31.5 3.3 30 90-119 46-79 (320)
63 2bcx_B Ryanodine receptor 1; E 59.7 8.9 0.0003 23.4 3.0 19 142-160 4-22 (30)
64 1sfx_A Conserved hypothetical 59.4 3.5 0.00012 27.6 1.3 50 10-75 17-67 (109)
65 2y75_A HTH-type transcriptiona 58.5 4.1 0.00014 29.5 1.7 74 16-109 12-86 (129)
66 1jgs_A Multiple antibiotic res 58.5 3.8 0.00013 28.8 1.4 50 10-75 31-81 (138)
67 3bdd_A Regulatory protein MARR 58.5 3.8 0.00013 28.7 1.4 50 10-75 28-78 (142)
68 1s3j_A YUSO protein; structura 58.2 3.5 0.00012 29.6 1.2 50 10-75 34-84 (155)
69 3kfa_A Tyrosine-protein kinase 57.8 3.6 0.00012 31.9 1.3 37 81-117 4-47 (288)
70 4b8x_A SCO5413, possible MARR- 57.6 3.7 0.00013 30.2 1.3 51 11-75 33-84 (147)
71 1z91_A Organic hydroperoxide r 57.5 4.6 0.00016 28.7 1.7 50 10-75 37-87 (147)
72 2ycf_A Serine/threonine-protei 57.4 3 0.0001 33.3 0.8 29 90-118 13-45 (322)
73 2bv6_A MGRA, HTH-type transcri 57.4 6.6 0.00023 27.7 2.6 50 10-75 34-84 (142)
74 2fbi_A Probable transcriptiona 57.3 3.5 0.00012 28.9 1.1 50 10-75 33-83 (142)
75 1ub9_A Hypothetical protein PH 57.2 3.6 0.00012 27.6 1.1 61 12-88 15-77 (100)
76 2hr3_A Probable transcriptiona 57.2 3.1 0.00011 29.5 0.8 50 11-75 33-83 (147)
77 2wte_A CSA3; antiviral protein 57.1 4.9 0.00017 33.3 2.1 59 10-88 149-208 (244)
78 3gxj_A TGF-beta receptor type- 57.1 5 0.00017 31.1 2.0 27 90-116 6-34 (303)
79 3cjn_A Transcriptional regulat 56.7 4.5 0.00016 29.4 1.6 50 10-75 49-99 (162)
80 4asz_A BDNF/NT-3 growth factor 56.5 4.4 0.00015 33.8 1.7 27 91-117 17-52 (299)
81 4aik_A Transcriptional regulat 56.4 4.3 0.00015 30.2 1.5 51 10-75 28-79 (151)
82 1csn_A Casein kinase-1; phosph 56.3 4.5 0.00015 31.4 1.6 27 90-116 13-43 (298)
83 4gt4_A Tyrosine-protein kinase 56.2 3.7 0.00013 34.5 1.2 27 90-116 29-64 (308)
84 2eth_A Transcriptional regulat 55.6 4.7 0.00016 29.2 1.5 50 10-75 41-91 (154)
85 2nru_A Interleukin-1 receptor- 55.2 4.8 0.00016 31.6 1.7 27 90-116 34-62 (307)
86 3mi9_A Cell division protein k 54.8 4.8 0.00016 32.6 1.6 27 90-116 20-50 (351)
87 3nsz_A CK II alpha, casein kin 54.0 5 0.00017 31.8 1.6 28 90-117 39-70 (330)
88 3lb7_A RAF proto-oncogene seri 53.8 4.8 0.00016 32.4 1.5 29 90-118 39-68 (307)
89 2pex_A Transcriptional regulat 53.6 5.5 0.00019 28.6 1.6 50 10-75 44-94 (153)
90 4fx0_A Probable transcriptiona 53.6 4.7 0.00016 29.9 1.3 52 11-74 31-84 (148)
91 4b99_A Mitogen-activated prote 53.5 5.2 0.00018 34.9 1.7 28 90-117 57-88 (398)
92 2fbk_A Transcriptional regulat 53.2 11 0.00036 28.3 3.2 53 10-75 66-119 (181)
93 2nnn_A Probable transcriptiona 52.9 4.9 0.00017 28.1 1.2 50 10-75 35-85 (140)
94 3t8r_A Staphylococcus aureus C 52.8 8.9 0.00031 28.9 2.8 76 14-109 12-88 (143)
95 3bro_A Transcriptional regulat 52.6 7.1 0.00024 27.3 2.1 52 10-75 31-83 (141)
96 3sv0_A Casein kinase I-like; t 52.5 7.1 0.00024 34.7 2.5 28 90-117 10-41 (483)
97 3pqk_A Biofilm growth-associat 51.9 9.9 0.00034 26.2 2.7 63 7-88 16-80 (102)
98 2zv2_A Calcium/calmodulin-depe 51.6 4.6 0.00016 31.8 1.0 28 90-117 16-47 (298)
99 1ylf_A RRF2 family protein; st 51.5 8.2 0.00028 29.0 2.4 73 15-109 16-89 (149)
100 4g3f_A NF-kappa-beta-inducing 51.4 5.2 0.00018 34.5 1.4 28 90-117 61-92 (336)
101 3g33_A Cell division protein k 51.4 8.2 0.00028 30.5 2.4 28 90-117 12-43 (308)
102 1hsj_A Fusion protein consisti 51.1 5 0.00017 34.5 1.2 51 11-75 402-453 (487)
103 4aw0_A HPDK1, 3-phosphoinositi 51.0 4.8 0.00016 34.4 1.1 28 90-117 35-66 (311)
104 3cuo_A Uncharacterized HTH-typ 50.9 7.1 0.00024 26.1 1.7 64 7-88 17-82 (99)
105 3k69_A Putative transcription 50.8 11 0.00037 29.2 3.0 73 15-108 14-87 (162)
106 3qd2_B Eukaryotic translation 50.7 7.5 0.00026 30.4 2.1 27 91-117 10-40 (332)
107 3og7_A AKAP9-BRAF fusion prote 50.2 5.6 0.00019 31.2 1.3 28 90-117 27-55 (289)
108 2g9w_A Conserved hypothetical 49.2 7.5 0.00026 28.5 1.8 57 8-75 4-61 (138)
109 3i6u_A CDS1, serine/threonine- 49.2 7.7 0.00026 33.0 2.1 29 90-118 138-170 (419)
110 3dzo_A Rhoptry kinase domain; 48.6 6 0.0002 33.6 1.3 28 90-117 81-112 (413)
111 3op5_A Serine/threonine-protei 48.2 9.8 0.00034 31.1 2.5 28 90-117 38-74 (364)
112 3u2r_A Regulatory protein MARR 48.0 6.7 0.00023 28.9 1.4 52 10-75 43-95 (168)
113 4aoj_A High affinity nerve gro 47.4 5.5 0.00019 33.7 0.9 28 90-117 44-80 (329)
114 2y4i_B KSR2, HKSR2, kinase sup 46.9 10 0.00036 29.7 2.4 28 90-117 36-64 (319)
115 4b9d_A Serine/threonine-protei 46.9 8.2 0.00028 33.5 1.9 27 91-117 28-58 (350)
116 2fxa_A Protease production reg 46.7 6.4 0.00022 30.9 1.1 50 10-75 45-95 (207)
117 2yex_A Serine/threonine-protei 46.1 10 0.00035 29.0 2.2 28 91-118 11-42 (276)
118 2ac3_A MAP kinase-interacting 45.8 12 0.00039 29.5 2.5 26 92-117 18-47 (316)
119 4f9c_A Cell division cycle 7-r 45.7 4.7 0.00016 34.4 0.2 27 90-116 24-57 (361)
120 3q4u_A Activin receptor type-1 45.6 6.2 0.00021 30.6 0.9 26 91-116 12-39 (301)
121 3rgf_A Cyclin-dependent kinase 45.5 10 0.00035 31.6 2.2 27 91-117 25-57 (405)
122 1okr_A MECI, methicillin resis 45.2 5.3 0.00018 28.0 0.4 56 8-75 5-61 (123)
123 3r0a_A Putative transcriptiona 45.1 9.1 0.00031 27.9 1.7 53 9-75 22-75 (123)
124 4g31_A Eukaryotic translation 45.1 7.3 0.00025 32.3 1.3 27 91-117 9-39 (299)
125 3lwf_A LIN1550 protein, putati 44.8 14 0.00047 28.8 2.8 75 15-109 29-104 (159)
126 3g2f_A Bone morphogenetic prot 44.6 6.6 0.00022 31.2 0.9 27 91-117 17-45 (336)
127 3fpq_A Serine/threonine-protei 44.4 7.4 0.00025 32.5 1.2 27 91-117 30-60 (290)
128 1p6r_A Penicillinase repressor 44.4 6.6 0.00023 26.1 0.8 56 8-75 4-60 (82)
129 4euu_A Serine/threonine-protei 44.0 9 0.00031 30.5 1.6 28 90-117 12-43 (319)
130 3uqc_A Probable conserved tran 43.7 7.8 0.00027 31.1 1.2 27 91-117 35-65 (286)
131 1fx7_A Iron-dependent represso 43.3 8 0.00027 30.9 1.2 61 9-88 2-65 (230)
132 4ase_A Vascular endothelial gr 43.2 6.5 0.00022 33.7 0.7 27 90-116 67-102 (353)
133 2qq9_A Diphtheria toxin repres 43.2 6.5 0.00022 31.5 0.7 60 10-88 3-65 (226)
134 2vuw_A Serine/threonine-protei 43.2 6.8 0.00023 31.5 0.8 29 90-118 23-53 (336)
135 2h6d_A 5'-AMP-activated protei 43.0 10 0.00035 29.1 1.7 28 90-117 14-45 (276)
136 3soc_A Activin receptor type-2 42.8 8.2 0.00028 31.0 1.2 28 90-117 27-56 (322)
137 2y0a_A Death-associated protei 42.4 11 0.00038 30.5 1.9 28 90-117 14-45 (326)
138 1p4x_A Staphylococcal accessor 42.2 7.9 0.00027 32.0 1.0 52 10-75 155-207 (250)
139 2wtk_C Serine/threonine-protei 42.1 11 0.00036 29.5 1.7 29 90-118 8-40 (305)
140 2a2a_A Death-associated protei 42.1 10 0.00036 30.2 1.7 28 90-117 15-46 (321)
141 3ubd_A Ribosomal protein S6 ki 41.8 11 0.00037 31.9 1.8 28 90-117 27-61 (304)
142 1r7j_A Conserved hypothetical 41.5 9.3 0.00032 27.2 1.2 49 16-88 11-60 (95)
143 3byv_A Rhoptry kinase; malaria 41.4 8.3 0.00029 31.8 1.1 28 90-117 76-107 (377)
144 3e7e_A HBUB1, BUB1A, mitotic c 41.4 11 0.00039 30.7 1.9 28 90-117 68-104 (365)
145 1z57_A Dual specificity protei 41.3 6 0.00021 31.0 0.2 28 90-117 17-49 (339)
146 2i6l_A Mitogen-activated prote 40.9 9.3 0.00032 29.7 1.2 28 90-117 14-45 (320)
147 3cok_A Serine/threonine-protei 40.9 10 0.00035 29.2 1.4 27 91-117 15-45 (278)
148 2ivs_A Proto-oncogene tyrosine 40.8 7.1 0.00024 30.5 0.5 28 90-117 26-62 (314)
149 2oqg_A Possible transcriptiona 40.8 8.8 0.0003 26.4 1.0 53 6-75 13-67 (114)
150 3dls_A PAS domain-containing s 40.6 13 0.00044 30.4 2.1 28 90-117 27-58 (335)
151 2yab_A Death-associated protei 40.6 9.8 0.00034 32.0 1.4 28 90-117 15-46 (361)
152 3kmu_A ILK, integrin-linked ki 40.5 6.9 0.00024 29.7 0.4 28 91-118 14-43 (271)
153 2x7f_A TRAF2 and NCK-interacti 40.4 14 0.00046 29.3 2.1 28 90-117 27-58 (326)
154 3cbl_A C-FES, proto-oncogene t 40.2 9.1 0.00031 31.8 1.1 28 90-117 117-148 (377)
155 3kn6_A Ribosomal protein S6 ki 39.9 11 0.00038 30.6 1.6 35 82-117 7-45 (325)
156 2iwi_A Serine/threonine-protei 39.8 8.7 0.0003 30.3 0.9 28 90-117 34-65 (312)
157 1ku9_A Hypothetical protein MJ 39.8 13 0.00045 25.9 1.8 51 10-75 23-74 (152)
158 4f0f_A Serine/threonine-protei 39.5 17 0.00057 28.1 2.5 26 91-116 23-52 (287)
159 3pg1_A Mitogen-activated prote 39.5 8.1 0.00028 31.2 0.7 27 90-116 25-54 (362)
160 3eb0_A Putative uncharacterize 39.3 10 0.00035 31.3 1.3 27 90-116 10-40 (383)
161 3dbq_A Dual specificity protei 39.2 14 0.00048 30.0 2.1 27 91-117 13-42 (343)
162 3lax_A Phenylacetate-coenzyme 39.2 41 0.0014 23.2 4.3 35 144-185 61-95 (109)
163 3s95_A LIMK-1, LIM domain kina 39.0 12 0.00042 29.5 1.7 27 90-116 13-43 (310)
164 3ork_A Serine/threonine protei 38.7 9.3 0.00032 30.4 0.9 28 90-117 15-46 (311)
165 3uto_A Twitchin; kinase, muscl 38.6 11 0.00036 34.4 1.4 28 90-117 160-191 (573)
166 2kko_A Possible transcriptiona 38.3 11 0.00037 26.7 1.2 64 6-88 17-82 (108)
167 2eue_A Carbon catabolite derep 38.3 13 0.00045 28.6 1.7 26 91-116 17-46 (275)
168 3dtc_A Mitogen-activated prote 38.2 7.9 0.00027 29.7 0.4 27 91-117 11-39 (271)
169 2qkw_B Protein kinase; three-h 38.1 17 0.00056 28.9 2.3 27 90-116 42-71 (321)
170 3fme_A Dual specificity mitoge 38.0 9.7 0.00033 29.4 0.9 27 91-117 11-41 (290)
171 3vhe_A Vascular endothelial gr 37.9 12 0.0004 30.1 1.4 28 90-117 25-61 (359)
172 2vwi_A Serine/threonine-protei 37.9 13 0.00044 28.8 1.6 28 90-117 18-49 (303)
173 1mp8_A Focal adhesion kinase 1 37.9 11 0.00038 29.2 1.2 28 90-117 18-52 (281)
174 3hko_A Calcium/calmodulin-depe 37.8 11 0.00039 30.0 1.3 29 89-117 28-60 (345)
175 1opo_A Coat protein; plant vir 37.8 6.9 0.00023 35.1 0.0 35 147-181 34-69 (348)
176 1wak_A Serine/threonine-protei 37.8 9.8 0.00033 30.7 0.9 28 90-117 40-71 (397)
177 3fdn_A Serine/threonine-protei 37.7 9.2 0.00031 29.6 0.7 27 90-116 12-42 (279)
178 3e3p_A Protein kinase, putativ 37.6 12 0.00041 30.0 1.4 26 91-116 27-56 (360)
179 2v79_A DNA replication protein 37.6 12 0.0004 28.5 1.3 52 11-74 30-83 (135)
180 3h4j_B AMPK kdaid, SNF1-like p 37.3 11 0.00036 31.4 1.1 28 90-117 12-43 (336)
181 3q60_A ROP5B; pseudokinase, tr 37.3 10 0.00035 31.1 1.0 29 90-118 65-97 (371)
182 3a7i_A MST3 kinase, serine/thr 37.2 16 0.00054 28.6 2.0 27 91-117 26-56 (303)
183 3o0g_A Cell division protein k 37.1 16 0.00054 28.5 2.0 27 91-117 6-36 (292)
184 1q8y_A SR protein kinase; tran 37.1 9.4 0.00032 30.7 0.7 28 90-117 22-53 (373)
185 1byg_A CSK, protein (C-termina 37.0 12 0.0004 29.0 1.2 28 90-117 24-53 (278)
186 3bhy_A Death-associated protei 36.8 14 0.00049 28.4 1.7 27 91-117 9-39 (283)
187 3zgw_A Maternal embryonic leuc 36.8 14 0.00047 30.9 1.7 27 90-116 13-43 (347)
188 2h8h_A Proto-oncogene tyrosine 36.4 9.3 0.00032 33.8 0.6 28 90-117 270-300 (535)
189 2pmi_A Negative RE, cyclin-dep 36.4 16 0.00053 29.3 1.9 27 91-117 9-39 (317)
190 3uim_A Brassinosteroid insensi 36.4 19 0.00065 28.5 2.4 28 90-117 33-63 (326)
191 2y94_A 5'-AMP-activated protei 36.2 17 0.0006 32.1 2.3 28 90-117 19-50 (476)
192 1blx_A Cyclin-dependent kinase 36.0 26 0.00087 27.5 3.1 28 90-117 14-46 (326)
193 2a19_B Interferon-induced, dou 35.9 19 0.00066 27.4 2.3 28 91-118 15-46 (284)
194 3p1a_A MYT1 kinase, membrane-a 35.9 10 0.00035 30.3 0.7 26 90-115 60-89 (311)
195 2eva_A TAK1 kinase - TAB1 chim 35.8 13 0.00046 29.5 1.4 27 91-117 12-40 (307)
196 3p86_A Serine/threonine-protei 35.7 10 0.00035 30.5 0.7 27 91-117 41-69 (309)
197 2pml_X PFPK7, Ser/Thr protein 35.3 16 0.00054 29.1 1.8 29 90-118 34-64 (348)
198 3mdy_A Bone morphogenetic prot 35.3 9.3 0.00032 30.2 0.4 27 90-116 40-68 (337)
199 4eut_A Serine/threonine-protei 35.2 15 0.0005 30.7 1.6 28 90-117 12-43 (396)
200 1zy4_A Serine/threonine-protei 35.1 14 0.00049 28.3 1.4 27 91-117 10-40 (303)
201 3rp9_A Mitogen-activated prote 35.1 12 0.00042 31.7 1.1 27 90-116 56-86 (458)
202 3coi_A Mitogen-activated prote 35.0 11 0.00036 30.6 0.7 27 90-116 27-57 (353)
203 3ugc_A Tyrosine-protein kinase 34.9 13 0.00046 28.9 1.3 27 91-117 14-48 (295)
204 2j7t_A Serine/threonine-protei 34.8 20 0.00068 27.9 2.2 27 91-117 23-53 (302)
205 3sxs_A Cytoplasmic tyrosine-pr 34.6 10 0.00036 29.0 0.6 27 91-117 12-41 (268)
206 2vgo_A Serine/threonine-protei 34.6 11 0.00038 29.2 0.7 28 90-117 17-48 (284)
207 2zmd_A Dual specificity protei 34.6 14 0.00049 31.0 1.5 28 90-117 59-89 (390)
208 3llt_A Serine/threonine kinase 34.5 16 0.00053 29.5 1.6 28 90-117 38-69 (360)
209 3is5_A Calcium-dependent prote 34.4 18 0.00063 28.2 2.0 28 90-117 25-56 (285)
210 2xir_A Vascular endothelial gr 34.3 13 0.00045 29.0 1.1 28 90-117 30-66 (316)
211 3mtl_A Cell division protein k 34.2 16 0.00054 29.4 1.6 27 91-117 6-36 (324)
212 3oz6_A Mitogen-activated prote 34.0 16 0.00053 30.2 1.6 27 90-116 12-42 (388)
213 3cek_A Dual specificity protei 34.0 15 0.00052 29.0 1.5 28 90-117 31-61 (313)
214 3ll6_A Cyclin G-associated kin 34.0 15 0.00052 28.7 1.4 27 90-116 31-61 (337)
215 3fxz_A Serine/threonine-protei 34.0 11 0.00039 29.9 0.7 27 91-117 24-54 (297)
216 1tki_A Titin; serine kinase, m 33.8 13 0.00043 30.2 1.0 27 91-117 9-39 (321)
217 2wqm_A Serine/threonine-protei 33.8 18 0.00063 28.4 1.9 28 90-117 35-66 (310)
218 1qpc_A LCK kinase; alpha beta 33.7 11 0.00038 29.1 0.6 27 91-117 17-46 (279)
219 2psq_A Fibroblast growth facto 33.5 15 0.0005 30.6 1.4 28 90-117 84-122 (370)
220 1u59_A Tyrosine-protein kinase 33.4 15 0.00051 28.6 1.3 27 92-118 15-47 (287)
221 3an0_A Dual specificity mitoge 33.3 12 0.0004 30.0 0.7 28 90-117 54-85 (340)
222 1t4h_A Serine/threonine-protei 33.3 15 0.0005 28.6 1.2 28 90-117 29-60 (290)
223 2w4o_A Calcium/calmodulin-depe 33.3 17 0.00059 29.8 1.7 28 90-117 56-87 (349)
224 2jii_A Serine/threonine-protei 33.3 13 0.00045 30.1 1.0 28 90-117 45-84 (352)
225 4exu_A Mitogen-activated prote 33.3 12 0.0004 30.9 0.7 29 89-117 44-76 (371)
226 3niz_A Rhodanese family protei 33.3 18 0.00063 28.9 1.9 28 90-117 24-54 (311)
227 1x8b_A WEE1HU, WEE1-like prote 33.2 16 0.00054 27.7 1.4 28 90-117 14-45 (289)
228 2jam_A Calcium/calmodulin-depe 33.1 18 0.00061 28.4 1.7 27 91-117 13-43 (304)
229 3l9p_A Anaplastic lymphoma kin 33.0 22 0.00074 29.4 2.3 27 90-116 74-109 (367)
230 3uc3_A Serine/threonine-protei 32.9 25 0.00085 29.1 2.7 27 91-117 24-54 (361)
231 1ob3_A PFPK5, cell division co 32.6 13 0.00044 29.1 0.8 27 91-117 6-35 (288)
232 3tki_A Serine/threonine-protei 32.6 16 0.00054 29.6 1.4 27 91-117 11-41 (323)
233 2b9h_A MAP kinase FUS3, mitoge 32.5 13 0.00046 29.6 0.9 28 90-117 14-45 (353)
234 3c0i_A Peripheral plasma membr 32.3 18 0.00062 29.6 1.7 28 90-117 27-58 (351)
235 4e5w_A Tyrosine-protein kinase 32.1 17 0.00057 28.3 1.4 28 90-117 24-59 (302)
236 1sd4_A Penicillinase repressor 32.0 14 0.00049 25.8 0.9 55 9-75 6-61 (126)
237 2buj_A Serine/threonine-protei 32.0 17 0.00058 28.6 1.4 27 90-116 32-62 (317)
238 1r1u_A CZRA, repressor protein 31.9 15 0.0005 25.7 1.0 64 6-88 18-83 (106)
239 2pvf_A Fibroblast growth facto 31.9 16 0.00056 29.2 1.3 28 90-117 38-76 (334)
240 1phk_A Phosphorylase kinase; g 31.8 15 0.0005 28.6 1.0 28 90-117 20-51 (298)
241 2vx3_A Dual specificity tyrosi 31.7 12 0.00042 30.9 0.6 28 90-117 57-88 (382)
242 2h34_A Serine/threonine-protei 31.7 15 0.0005 29.2 1.0 27 91-117 38-68 (309)
243 3gen_A Tyrosine-protein kinase 31.4 16 0.00055 28.2 1.2 28 90-117 27-57 (283)
244 1k9a_A Carboxyl-terminal SRC k 31.4 15 0.0005 31.5 1.0 28 90-117 196-225 (450)
245 1b6c_B TGF-B superfamily recep 31.4 13 0.00043 29.6 0.6 29 89-117 44-74 (342)
246 3gbz_A Kinase, CMGC CDK; ssgci 31.4 15 0.00051 29.6 1.0 27 91-117 38-68 (329)
247 2o0y_A Transcriptional regulat 31.3 29 0.00099 28.2 2.7 47 17-75 24-71 (260)
248 4agu_A Cyclin-dependent kinase 31.2 16 0.00056 28.5 1.2 26 91-116 7-36 (311)
249 3lm5_A Serine/threonine-protei 31.1 17 0.0006 29.1 1.4 26 92-117 34-63 (327)
250 1fmk_A C-SRC, P60-SRC, tyrosin 31.1 15 0.00051 31.5 1.0 28 90-117 187-217 (452)
251 3aln_A Dual specificity mitoge 30.7 15 0.00051 29.2 0.9 28 90-117 25-56 (327)
252 3com_A Serine/threonine-protei 30.6 25 0.00086 27.5 2.2 27 91-117 33-63 (314)
253 1p4x_A Staphylococcal accessor 30.6 26 0.00088 28.9 2.3 52 10-75 31-83 (250)
254 2eu9_A Dual specificity protei 30.6 13 0.00046 29.3 0.6 28 90-117 22-54 (355)
255 2dyl_A Dual specificity mitoge 30.4 24 0.00083 27.5 2.1 27 91-117 29-59 (318)
256 2fst_X Mitogen-activated prote 30.4 17 0.00059 30.3 1.3 27 90-116 32-62 (367)
257 1qcf_A Haematopoetic cell kina 30.4 16 0.00055 31.2 1.1 29 90-118 191-222 (454)
258 3qyz_A Mitogen-activated prote 30.4 14 0.00048 30.2 0.7 27 91-117 31-61 (364)
259 1fot_A TPK1 delta, CAMP-depend 30.4 23 0.00079 28.9 2.0 27 91-117 10-40 (318)
260 1luf_A Muscle-specific tyrosin 30.3 13 0.00046 29.4 0.5 27 91-117 51-86 (343)
261 2h09_A Transcriptional regulat 30.3 15 0.00051 26.8 0.8 42 30-88 53-95 (155)
262 4hcu_A Tyrosine-protein kinase 30.2 17 0.0006 27.8 1.2 27 91-117 14-43 (269)
263 2xrw_A Mitogen-activated prote 30.0 14 0.00049 30.4 0.7 28 90-117 28-59 (371)
264 1u2w_A CADC repressor, cadmium 30.0 26 0.00087 25.2 2.0 58 13-88 42-100 (122)
265 3kvw_A DYRK2, dual specificity 29.9 14 0.00049 31.5 0.7 28 90-117 100-131 (429)
266 2r3i_A Cell division protein k 29.8 22 0.00076 27.5 1.7 27 91-117 7-37 (299)
267 2qr7_A Ribosomal protein S6 ki 29.6 16 0.00056 30.1 1.0 27 91-117 26-56 (342)
268 3kk8_A Calcium/calmodulin depe 29.6 15 0.00051 28.3 0.7 28 91-118 10-41 (284)
269 2y7j_A Phosphorylase B kinase 29.5 19 0.00066 29.7 1.4 28 90-117 97-128 (365)
270 1cm8_A Phosphorylated MAP kina 29.5 20 0.0007 29.7 1.6 27 90-116 28-58 (367)
271 1uly_A Hypothetical protein PH 29.5 15 0.0005 29.2 0.6 54 5-75 11-66 (192)
272 2rku_A Serine/threonine-protei 29.3 13 0.00046 28.9 0.4 27 90-116 18-48 (294)
273 1ua2_A CAK, cell division prot 29.3 16 0.00055 29.6 0.9 27 91-117 14-44 (346)
274 3m2w_A MAP kinase-activated pr 29.3 15 0.00051 29.0 0.7 26 92-117 23-52 (299)
275 3cc6_A Protein tyrosine kinase 29.2 16 0.00055 28.2 0.8 29 90-118 15-50 (281)
276 3qup_A Tyrosine-protein kinase 29.2 16 0.00054 28.9 0.8 28 90-117 26-60 (323)
277 3fe3_A MAP/microtubule affinit 29.1 24 0.00083 28.9 1.9 28 90-117 18-49 (328)
278 2x4f_A Myosin light chain kina 28.9 26 0.00091 29.2 2.2 27 92-118 94-124 (373)
279 3fhr_A MAP kinase-activated pr 28.9 18 0.00061 29.4 1.1 25 92-116 34-62 (336)
280 3ttj_A Mitogen-activated prote 28.8 16 0.00054 31.8 0.8 28 90-117 65-96 (464)
281 4aaa_A Cyclin-dependent kinase 28.6 25 0.00086 28.1 1.9 26 91-116 29-58 (331)
282 2yu3_A DNA-directed RNA polyme 28.5 14 0.00049 27.2 0.4 57 5-75 29-86 (95)
283 1j1b_A Glycogen synthase kinas 28.4 19 0.00065 30.5 1.2 27 90-116 57-87 (420)
284 3eqc_A Dual specificity mitoge 28.3 26 0.0009 28.2 2.0 27 91-117 37-67 (360)
285 2f2e_A PA1607; transcription f 28.3 31 0.0011 25.8 2.3 55 17-88 28-83 (146)
286 1xd7_A YWNA; structural genomi 28.2 34 0.0012 25.4 2.5 57 33-109 25-82 (145)
287 2qol_A Ephrin receptor; recept 28.1 25 0.00086 29.3 1.9 28 90-117 48-82 (373)
288 4eqm_A Protein kinase; transfe 28.1 13 0.00046 29.4 0.2 26 91-116 15-44 (294)
289 3q5i_A Protein kinase; CDPK, m 27.8 23 0.0008 30.6 1.7 27 91-117 40-70 (504)
290 2c30_A Serine/threonine-protei 27.5 20 0.00067 28.9 1.1 26 92-117 50-79 (321)
291 1y0u_A Arsenical resistance op 27.5 20 0.00069 24.4 1.0 52 13-88 31-83 (96)
292 2v62_A Serine/threonine-protei 27.3 25 0.00086 28.5 1.7 28 90-117 40-74 (345)
293 2d1h_A ST1889, 109AA long hypo 27.3 24 0.00082 23.4 1.4 52 9-75 17-69 (109)
294 2bdw_A Hypothetical protein K1 27.3 22 0.00076 29.5 1.4 28 90-117 32-63 (362)
295 2w5a_A Serine/threonine-protei 27.2 29 0.001 26.5 2.0 28 91-118 10-41 (279)
296 3brb_A Proto-oncogene tyrosine 27.1 19 0.00067 28.2 1.0 28 90-117 37-71 (313)
297 2k4b_A Transcriptional regulat 27.1 25 0.00087 25.3 1.5 55 9-75 31-86 (99)
298 2qvo_A Uncharacterized protein 27.0 21 0.0007 24.4 1.0 52 10-73 9-61 (95)
299 3lxp_A Non-receptor tyrosine-p 26.9 19 0.00066 28.7 0.9 28 90-117 34-69 (318)
300 2w1i_A JAK2; chromosomal rearr 26.8 24 0.00082 28.1 1.5 28 90-117 44-79 (326)
301 1opk_A P150, C-ABL, proto-onco 26.7 20 0.0007 31.2 1.1 29 89-117 222-254 (495)
302 3tt0_A Basic fibroblast growth 26.6 16 0.00055 30.2 0.4 28 90-117 72-110 (382)
303 2clq_A Mitogen-activated prote 26.5 25 0.00086 27.1 1.5 25 93-117 28-56 (295)
304 1xjd_A Protein kinase C, theta 26.4 23 0.00077 29.5 1.3 28 91-118 21-52 (345)
305 2owb_A Serine/threonine-protei 26.3 16 0.00055 29.5 0.4 27 90-116 44-74 (335)
306 2obp_A Putative DNA-binding pr 26.3 33 0.0011 25.0 2.1 52 11-75 14-69 (96)
307 2jsc_A Transcriptional regulat 26.2 29 0.00099 24.8 1.7 63 7-88 14-78 (118)
308 3mwu_A Calmodulin-domain prote 26.2 29 0.00099 29.8 2.0 27 90-116 25-55 (486)
309 3t9t_A Tyrosine-protein kinase 25.8 18 0.00063 27.4 0.6 27 91-117 12-41 (267)
310 2i1m_A Macrophage colony-stimu 25.7 23 0.00079 28.1 1.2 28 90-117 49-85 (333)
311 2wei_A Calmodulin-domain prote 25.7 17 0.00058 28.3 0.4 28 90-117 25-56 (287)
312 1t46_A HOMO sapiens V-KIT hard 25.6 16 0.00055 28.5 0.2 28 90-117 26-62 (313)
313 3kul_A Ephrin type-A receptor 25.6 29 0.00099 28.0 1.8 28 90-117 52-86 (325)
314 4ejn_A RAC-alpha serine/threon 25.6 25 0.00084 29.9 1.4 28 90-117 151-182 (446)
315 3f3z_A Calcium/calmodulin-depe 25.5 19 0.00066 27.6 0.7 27 91-117 13-43 (277)
316 3jth_A Transcription activator 25.1 21 0.00071 24.2 0.7 63 7-88 16-80 (98)
317 1vzo_A Ribosomal protein S6 ki 25.1 27 0.00092 28.6 1.5 28 90-117 57-91 (355)
318 3a8x_A Protein kinase C IOTA t 24.6 23 0.00078 29.2 1.0 27 91-117 13-43 (345)
319 4fr4_A YANK1, serine/threonine 24.6 33 0.0011 29.3 2.0 27 91-117 19-49 (384)
320 2yfx_A Tyrosine-protein kinase 24.3 32 0.0011 27.3 1.8 27 90-116 33-68 (327)
321 1o6l_A RAC-beta serine/threoni 24.3 30 0.001 28.5 1.7 27 91-117 9-39 (337)
322 3pls_A Macrophage-stimulating 24.3 25 0.00086 27.1 1.1 29 89-117 23-58 (298)
323 1qgp_A Protein (double strande 24.0 49 0.0017 22.5 2.5 50 13-75 14-64 (77)
324 3kex_A Receptor tyrosine-prote 23.8 35 0.0012 27.3 1.9 17 91-107 17-33 (325)
325 1kob_A Twitchin; kinase, intra 23.3 29 0.00098 29.4 1.4 27 91-117 55-85 (387)
326 4fvq_A Tyrosine-protein kinase 23.1 17 0.00058 28.1 -0.1 27 91-117 12-49 (289)
327 1rdq_E PKA C-alpha, CAMP-depen 23.0 37 0.0013 28.1 2.0 27 91-117 45-75 (350)
328 1xbb_A Tyrosine-protein kinase 23.0 31 0.001 26.9 1.4 24 94-117 24-53 (291)
329 3n9x_A Phosphotransferase; mal 22.9 22 0.00075 30.2 0.6 28 90-117 29-60 (432)
330 1nxk_A MAP kinase-activated pr 22.5 31 0.001 29.1 1.4 26 92-117 67-96 (400)
331 3txo_A PKC-L, NPKC-ETA, protei 22.5 31 0.0011 28.7 1.4 27 91-117 27-57 (353)
332 1p4o_A Insulin-like growth fac 22.4 23 0.00078 27.9 0.5 28 90-117 28-64 (322)
333 3v8s_A RHO-associated protein 22.3 37 0.0013 29.2 1.9 29 90-118 72-104 (410)
334 1rjb_A FL cytokine receptor; k 22.3 25 0.00084 28.1 0.7 28 90-117 48-84 (344)
335 1u5q_A Serine/threonine protei 22.2 26 0.00089 28.9 0.9 27 91-117 58-88 (348)
336 1v4r_A Transcriptional repress 22.2 80 0.0027 21.7 3.3 44 28-88 31-76 (102)
337 3nyv_A Calmodulin-domain prote 22.0 28 0.00097 29.7 1.1 27 90-116 29-59 (484)
338 3v5w_A G-protein coupled recep 21.9 34 0.0012 32.9 1.7 28 90-117 192-223 (689)
339 1q1h_A TFE, transcription fact 21.6 56 0.0019 22.5 2.4 49 11-75 16-66 (110)
340 3gni_B Strad alpha; kinase fol 21.2 34 0.0012 28.1 1.4 28 90-117 28-61 (389)
341 1fse_A GERE; helix-turn-helix 21.2 24 0.00082 22.3 0.4 48 6-67 7-54 (74)
342 3lij_A Calcium/calmodulin depe 21.1 28 0.00096 30.0 0.9 28 90-117 40-71 (494)
343 3lxl_A Tyrosine-protein kinase 21.0 29 0.00098 27.6 0.9 27 91-117 27-61 (327)
344 2r5t_A Serine/threonine-protei 20.8 47 0.0016 28.0 2.2 28 90-117 41-72 (373)
345 2vd5_A DMPK protein; serine/th 20.7 43 0.0015 28.8 2.0 27 91-117 65-95 (412)
346 1mqb_A Ephrin type-A receptor 20.7 31 0.0011 27.8 1.0 27 91-117 48-82 (333)
347 2i0e_A Protein kinase C-beta I 20.2 28 0.00096 29.0 0.7 28 91-118 24-55 (353)
348 3lzb_A Epidermal growth factor 20.2 37 0.0013 27.4 1.4 17 91-107 19-35 (327)
349 3a62_A Ribosomal protein S6 ki 20.1 36 0.0012 27.4 1.3 27 91-117 21-54 (327)
No 1
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.94 E-value=8.8e-28 Score=216.07 Aligned_cols=104 Identities=31% Similarity=0.399 Sum_probs=90.3
Q ss_pred CCcchHHhcccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCC--Ccccccccccchhhhhc-cccccCCC
Q 040944 1 MKLDVDVLRYLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFP--VPSAVDCNRHCIDDDEK-GVIHKDPA 77 (188)
Q Consensus 1 MkL~ae~~r~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls--~ee~vd~~r~~l~rL~k-~LV~R~~~ 77 (188)
||||++.||+|+++|||||+|||+|||||||||+++|.++| |+. .+.+. ++|++|.+ +||.|.
T Consensus 2 m~l~~~~~r~l~~~d~rvL~ave~g~~~he~vp~~~i~~~~--------~l~~~~~~~~----~~l~~l~~~~lv~~~-- 67 (397)
T 4gyi_A 2 MKLDTRAMRHLTAEDWRVLTAVEMGSKNHEIVPTPLIEKIA--------RLRGGSSGVH----KSIATLAKAGLIARM-- 67 (397)
T ss_dssp -CCCCSGGGTCCHHHHHHHHHHHHHTTTCSSEEHHHHHHHH--------CSSSCCCSHH----HHHHHHHHTTSEEEE--
T ss_pred CcCCHHHHhhcCHHHHHHHHHHHhccCCcccccHHHHHHHh--------CCCCchHhHH----HHHHhhhhcCceeec--
Confidence 89999999999999999999999999999999999999997 774 22343 78999999 699874
Q ss_pred ccCCccceehh------------------hhcccccCcCCcCceeeccCC---CeeEEeeeh
Q 040944 78 LNSKKEGVSEE------------------NQQNSEAGRGSEPDRHNASDK---VGAIIFCEY 118 (188)
Q Consensus 78 ~~~~YeGY~Lt------------------~alG~~IGVGKESDVYea~~~---~~aiKFh~~ 118 (188)
.+.+|+||+|| .++|.+||+||||+||.|.++ .+|+|+|+.
T Consensus 68 ~~~~y~gy~lt~~gyD~LAL~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~ 129 (397)
T 4gyi_A 68 KEAKYDGYRLTYGGLDYLALHTHAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRL 129 (397)
T ss_dssp ECSSCEEEEECHHHHHHHHHHHHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECT
T ss_pred cCCCcceeeeccCchHHHHHHHHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEec
Confidence 27899999988 578999999999999999443 899999874
No 2
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.71 E-value=2.3e-18 Score=142.94 Aligned_cols=101 Identities=16% Similarity=0.217 Sum_probs=85.5
Q ss_pred cchHHhcccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccCCCccCC
Q 040944 3 LDVDVLRYLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKDPALNSK 81 (188)
Q Consensus 3 L~ae~~r~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~~~~~~~ 81 (188)
++++.|++|+++|||||+|+|+||++|+|||+++|.+++ +++..... .++.+|.+ .++.++ ..+
T Consensus 2 ~~~~~~~~l~~~~~~~l~a~e~g~~~~~~v~~~~i~~~~--------~l~~~~~~----~~l~~l~~~~l~~~~---~~~ 66 (282)
T 1zar_A 2 NIAELYGKMGKHSWRIMDAIFKNLWDYEYVPLQLISSHA--------RIGEEKAR----NILKYLSDLRVVQNR---QKD 66 (282)
T ss_dssp CHHHHHHTCCHHHHHHHHHHHTTTTTCSSEEHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEE---CSS
T ss_pred chHHHHHhCCHhhhhhhHHHhhCCcCceecCHHHHHHHh--------CCChhhHH----HHHHHHhhCCCcccc---CCC
Confidence 459999999999999999999999999999999999997 88855544 57777777 577764 678
Q ss_pred ccceehh------------------hhcccccCcCCcCceeeccC---CCeeEEeeeh
Q 040944 82 KEGVSEE------------------NQQNSEAGRGSEPDRHNASD---KVGAIIFCEY 118 (188)
Q Consensus 82 YeGY~Lt------------------~alG~~IGVGKESDVYea~~---~~~aiKFh~~ 118 (188)
|+||+++ ..+|..||.|++|.||.|.+ ..+|+|++..
T Consensus 67 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~ 124 (282)
T 1zar_A 67 YEGSTFTFIGLSLYSLHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKV 124 (282)
T ss_dssp SCEEEECHHHHHHHHHHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC
T ss_pred ccceeeecCCccHHHHHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEEC
Confidence 9999987 34779999999999999942 3899999863
No 3
>2x4h_A Hypothetical protein SSO2273; transcription; 2.30A {Sulfolobus solfataricus}
Probab=86.31 E-value=0.3 Score=35.34 Aligned_cols=64 Identities=19% Similarity=0.225 Sum_probs=47.5
Q ss_pred HhcccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccCCCccCCccce
Q 040944 7 VLRYLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKDPALNSKKEGV 85 (188)
Q Consensus 7 ~~r~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~~~~~~~YeGY 85 (188)
.+..|+...+++|.+|....+...-+....|++.. +++...+. +.+++|++ +||.|. . .+|
T Consensus 7 ~~~~lt~~~~~~L~~l~~l~~~~~~~s~~ela~~l--------~is~~tv~----~~l~~Le~~Gli~r~---~---~~~ 68 (139)
T 2x4h_A 7 QMSNLSRREFSYLLTIKRYNDSGEGAKINRIAKDL--------KIAPSSVF----EEVSHLEEKGLVKKK---E---DGV 68 (139)
T ss_dssp ----CCHHHHHHHHHHHHHHTTTSCBCHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEE---T---TEE
T ss_pred HHhhcCHHHHHHHHHHHHHHhcCCCcCHHHHHHHh--------CCChHHHH----HHHHHHHHCCCEEec---C---CeE
Confidence 35578899999999987665566778888899986 89855555 78999988 799985 2 467
Q ss_pred ehh
Q 040944 86 SEE 88 (188)
Q Consensus 86 ~Lt 88 (188)
.+|
T Consensus 69 ~Lt 71 (139)
T 2x4h_A 69 WIT 71 (139)
T ss_dssp EEC
T ss_pred EEC
Confidence 776
No 4
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=81.06 E-value=0.51 Score=37.71 Aligned_cols=28 Identities=14% Similarity=0.089 Sum_probs=23.3
Q ss_pred hcccccCcCCcCceeeccC---C-C--eeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD---K-V--GAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~---~-~--~aiKFh~ 117 (188)
.++.+||.|++|.||.|.+ + . +|+|.++
T Consensus 50 ~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~ 83 (258)
T 1zth_A 50 AMGGVISTGKEANVFYADGVFDGKPVAMAVKIYR 83 (258)
T ss_dssp EEEEEEEECSSEEEEEEEEEETTEEEEEEEEEEC
T ss_pred hhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEE
Confidence 5778999999999999943 3 6 9999864
No 5
>2dk5_A DNA-directed RNA polymerase III 39 kDa polypeptide; structural genomics, winged helix domain, NPPSFA; NMR {Homo sapiens} SCOP: a.4.5.85
Probab=78.56 E-value=0.72 Score=33.32 Aligned_cols=57 Identities=11% Similarity=0.077 Sum_probs=42.9
Q ss_pred hHHhcccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 5 VDVLRYLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 5 ae~~r~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
+..+..|++++|.||..|+..=. +=+....|++.+ +++...+. ++|++|++ +||+|.
T Consensus 12 ~~k~~~Lt~~q~~Vl~~I~~~g~--~gi~qkeLa~~~--------~l~~~tvt----~iLk~LE~kglIkr~ 69 (91)
T 2dk5_A 12 AGKMKGSDNQEKLVYQIIEDAGN--KGIWSRDVRYKS--------NLPLTEIN----KILKNLESKKLIKAV 69 (91)
T ss_dssp CCCCCCSCSSHHHHHHHHHHHCT--TCEEHHHHHHHT--------TCCHHHHH----HHHHHHHHTTSEEEE
T ss_pred HhhhcCCCHHHHHHHHHHHHcCC--CCcCHHHHHHHH--------CCCHHHHH----HHHHHHHHCCCEEEe
Confidence 45667899999999999996211 235566788876 88866666 89999999 699853
No 6
>3tgn_A ADC operon repressor ADCR; helix-turn-helix, transcriptional regulator, transcription; 2.00A {Streptococcus pneumoniae}
Probab=78.49 E-value=0.86 Score=32.54 Aligned_cols=49 Identities=12% Similarity=0.168 Sum_probs=39.1
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|. .+. +....|++.. |++...+. +.+++|.+ |||.|.
T Consensus 35 ~lt~~~~~iL~~l~----~~~-~t~~eLa~~l--------~~s~~tvs----~~l~~L~~~Glv~r~ 84 (146)
T 3tgn_A 35 ALTNTQEHILMLLS----EES-LTNSELARRL--------NVSQAAVT----KAIKSLVKEGMLETS 84 (146)
T ss_dssp CCCHHHHHHHHHHT----TCC-CCHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEC-
T ss_pred CCCHHHHHHHHHHH----hCC-CCHHHHHHHH--------CCCHHHHH----HHHHHHHHCCCeEec
Confidence 46888999999985 345 8999999986 99866666 79999998 799885
No 7
>1i1g_A Transcriptional regulator LRPA; helix-turn-helix, LRP/ASNC family; 2.90A {Pyrococcus furiosus} SCOP: a.4.5.32 d.58.4.2
Probab=78.25 E-value=1.2 Score=32.39 Aligned_cols=62 Identities=24% Similarity=0.284 Sum_probs=42.8
Q ss_pred cCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccCCCc-cCCccceehh
Q 040944 11 LSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKDPAL-NSKKEGVSEE 88 (188)
Q Consensus 11 L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~~~~-~~~YeGY~Lt 88 (188)
|++.|++||..+..+ .-.+...|++.. |+|...+. +++.+|.. ++|++.... .....||.++
T Consensus 2 ld~~~~~il~~L~~~----~~~~~~ela~~l--------g~s~~tv~----~~l~~L~~~G~i~~~~~~~~~~~~g~~~~ 65 (141)
T 1i1g_A 2 IDERDKIILEILEKD----ARTPFTEIAKKL--------GISETAVR----KRVKALEEKGIIEGYTIKINPKKLGYSLV 65 (141)
T ss_dssp CCSHHHHHHHHHHHC----TTCCHHHHHHHH--------TSCHHHHH----HHHHHHHHHTSSCCCCCCCCSGGGTCCEE
T ss_pred CCHHHHHHHHHHHHc----CCCCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCCEeccccccChHHhCccEE
Confidence 678899999998654 336888888886 99855554 78888988 788764211 1224577654
No 8
>2fbh_A Transcriptional regulator PA3341; MARR, transcription regulator, APC5857, structural genomics, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.28
Probab=77.22 E-value=1.7 Score=30.75 Aligned_cols=51 Identities=22% Similarity=0.281 Sum_probs=40.0
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|.. .++-+....|++.. |++.+.+. +.+++|.+ +||.|.
T Consensus 34 ~l~~~~~~iL~~l~~---~~~~~t~~~la~~l--------~~s~~~vs----~~l~~L~~~glv~r~ 85 (146)
T 2fbh_A 34 GLSQARWLVLLHLAR---HRDSPTQRELAQSV--------GVEGPTLA----RLLDGLESQGLVRRL 85 (146)
T ss_dssp CCTTTHHHHHHHHHH---CSSCCBHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEE
T ss_pred CCCHHHHHHHHHHHH---cCCCCCHHHHHHHh--------CCChhhHH----HHHHHHHHCCCeeec
Confidence 478899999999932 34567888888886 89866666 78999998 799875
No 9
>3i4p_A Transcriptional regulator, ASNC family; PSI, structural genom protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens str}
Probab=77.05 E-value=1.1 Score=34.17 Aligned_cols=62 Identities=21% Similarity=0.284 Sum_probs=43.6
Q ss_pred cCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccCCC-ccCCccceehh
Q 040944 11 LSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKDPA-LNSKKEGVSEE 88 (188)
Q Consensus 11 L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~~~-~~~~YeGY~Lt 88 (188)
|++.|.+||.++...-+ +|...|++.. |+|...+. +++.+|.+ ++|++-.. .....-||.++
T Consensus 1 lD~~d~~il~~L~~~~~----~s~~~la~~l--------g~s~~tv~----~rl~~L~~~g~i~~~~a~~~~~~lG~~~~ 64 (162)
T 3i4p_A 1 MDRLDRKILRILQEDST----LAVADLAKKV--------GLSTTPCW----RRIQKMEEDGVIRRRVALLDPVKVNTKVT 64 (162)
T ss_dssp CCHHHHHHHHHHTTCSC----SCHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSSCCCCCCCCTTTTTCCEE
T ss_pred CCHHHHHHHHHHHHCCC----CCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCCeeeceeeeCHHHhcCcEE
Confidence 56789999999876543 5999999987 99955555 79999988 78886321 12224566544
No 10
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=75.58 E-value=0.82 Score=37.86 Aligned_cols=27 Identities=11% Similarity=0.117 Sum_probs=22.2
Q ss_pred cccccCcCCcCceeec--cCCCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNA--SDKVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea--~~~~~aiKFh~ 117 (188)
|+.+||.|.+|.||.| .+..+|||...
T Consensus 7 L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~ 35 (303)
T 3hmm_A 7 LQESIGKGRFGEVWRGKWRGEEVAVKIFS 35 (303)
T ss_dssp EEEEEEECSSSEEEEEEETTEEEEEEEEC
T ss_pred EEEEEeeCCCeEEEEEEECCEEEEEEEEC
Confidence 5688999999999999 33389999753
No 11
>2fa5_A Transcriptional regulator MARR/EMRR family; multiple antibiotics resistance repressor, XCC structural genomics, X-RAY diffraction; 1.80A {Xanthomonas campestris}
Probab=74.83 E-value=1.4 Score=32.13 Aligned_cols=50 Identities=8% Similarity=0.113 Sum_probs=39.2
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|.. +.-+....|++.. +++...+. +.+++|.+ +||.|.
T Consensus 46 ~lt~~~~~iL~~l~~----~~~~t~~ela~~l--------~is~~tvs----~~l~~Le~~glv~r~ 96 (162)
T 2fa5_A 46 GMAIPEWRVITILAL----YPGSSASEVSDRT--------AMDKVAVS----RAVARLLERGFIRRE 96 (162)
T ss_dssp CCCHHHHHHHHHHHH----STTCCHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEC-
T ss_pred CCCHHHHHHHHHHHh----CCCCCHHHHHHHH--------CCCHHHHH----HHHHHHHHCCCEeee
Confidence 588899999999975 3567777788876 88866666 78999999 799885
No 12
>3ech_A MEXR, multidrug resistance operon repressor; winged helix, helix-turn-helix, protein-peptide complex; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.28 PDB: 1lnw_A 3mex_A
Probab=74.59 E-value=1.5 Score=31.38 Aligned_cols=50 Identities=12% Similarity=0.152 Sum_probs=37.2
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|.. +.-+....|++.. |++...+. +.+++|.+ +||.|.
T Consensus 34 ~lt~~~~~vL~~l~~----~~~~t~~eLa~~l--------~~~~~tvs----~~l~~L~~~Glv~r~ 84 (142)
T 3ech_A 34 DLTPPDVHVLKLIDE----QRGLNLQDLGRQM--------CRDKALIT----RKIRELEGRNLVRRE 84 (142)
T ss_dssp CCCHHHHHHHHHHHH----TTTCCHHHHHHHH--------C---CHHH----HHHHHHHHTTSEEC-
T ss_pred CCCHHHHHHHHHHHh----CCCcCHHHHHHHh--------CCCHHHHH----HHHHHHHHCCCEeec
Confidence 488999999999975 3357778888886 88866666 79999999 799985
No 13
>3oop_A LIN2960 protein; protein structure initiative, PSI-2, structural genomics, MI center for structural genomics, MCSG, unknown function; 1.78A {Listeria innocua}
Probab=74.44 E-value=1.2 Score=31.84 Aligned_cols=50 Identities=16% Similarity=0.231 Sum_probs=40.2
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|... .-+....|++.. +++...+. +.+++|.+ |||.|.
T Consensus 34 ~lt~~~~~iL~~l~~~----~~~t~~eLa~~l--------~~~~~~vs----~~l~~L~~~Glv~r~ 84 (143)
T 3oop_A 34 DVTPEQWSVLEGIEAN----EPISQKEIALWT--------KKDTPTVN----RIVDVLLRKELIVRE 84 (143)
T ss_dssp SSCHHHHHHHHHHHHH----SSEEHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEE
T ss_pred CCCHHHHHHHHHHHHc----CCcCHHHHHHHH--------CCCHhhHH----HHHHHHHHCCCeecc
Confidence 3788999999999754 567788888886 88866666 79999999 799885
No 14
>1on2_A Transcriptional regulator MNTR; helix-turn-helix, DNA-binding protein, metalloregulatory protein; 1.61A {Bacillus subtilis} SCOP: a.4.5.24 a.76.1.1 PDB: 2ev0_A 1on1_A 2ev5_A 2ev6_A* 2f5c_A 2f5d_A 2f5e_A 2f5f_A 2hyf_A* 2hyg_D 3r60_A* 3r61_A*
Probab=74.26 E-value=0.81 Score=33.23 Aligned_cols=61 Identities=8% Similarity=0.004 Sum_probs=43.1
Q ss_pred cCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccCCCccCCccceehh
Q 040944 11 LSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKDPALNSKKEGVSEE 88 (188)
Q Consensus 11 L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~~~~~~~YeGY~Lt 88 (188)
|++...++|.+|-.-...+.-+....|++.. |++.+.+. +.+++|.+ +||.|. ++.+|.+|
T Consensus 2 ls~~~~~~L~~i~~l~~~~~~~~~~ela~~l--------~vs~~tvs----~~l~~Le~~Glv~r~-----~~~~~~LT 63 (142)
T 1on2_A 2 TTPSMEMYIEQIYMLIEEKGYARVSDIAEAL--------AVHPSSVT----KMVQKLDKDEYLIYE-----KYRGLVLT 63 (142)
T ss_dssp CCHHHHHHHHHHHHHHHHHSSCCHHHHHHHH--------TSCHHHHH----HHHHHHHHTTSEEEE-----TTTEEEEC
T ss_pred CChHHHHHHHHHHHHHhhcCCCCHHHHHHHh--------CCCHHHHH----HHHHHHHHCCCEEEe-----eCceEEEc
Confidence 4555667777776544444568888888886 99866666 78999998 799884 23567777
No 15
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=73.85 E-value=1.6 Score=37.04 Aligned_cols=29 Identities=14% Similarity=0.017 Sum_probs=24.0
Q ss_pred hhcccccCcCCcCceeecc-CCCeeEEeee
Q 040944 89 NQQNSEAGRGSEPDRHNAS-DKVGAIIFCE 117 (188)
Q Consensus 89 ~alG~~IGVGKESDVYea~-~~~~aiKFh~ 117 (188)
-.++.+||.|.+|.||.|. ...+|+|.-+
T Consensus 38 l~l~~~iG~G~fG~Vy~~~~~~~vAvK~~~ 67 (307)
T 3omv_A 38 VMLSTRIGSGSFGTVYKGKWHGDVAVKILK 67 (307)
T ss_dssp CCEEEECCCCSSSEEEEEESSSEEEEEECC
T ss_pred eEEeeEEeeCCCcEEEEEEECCcEEEEEEE
Confidence 3578899999999999994 3489999865
No 16
>3kp7_A Transcriptional regulator TCAR; multiple drug resistance, biofilm, transcription regulation, binding, transcription regulator; 2.30A {Staphylococcus epidermidis RP62A} PDB: 3kp3_A* 3kp4_A* 3kp5_A* 3kp2_A* 3kp6_A
Probab=73.76 E-value=1.2 Score=32.16 Aligned_cols=48 Identities=10% Similarity=0.098 Sum_probs=39.1
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-ccccc
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHK 74 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R 74 (188)
.|+..+|+||..| .++-+....|++.. +++.+.+. +.+++|.+ +||.|
T Consensus 35 ~lt~~q~~iL~~l-----~~~~~t~~eLa~~l--------~~~~~~vs----~~l~~Le~~Glv~r 83 (151)
T 3kp7_A 35 GISAEQSHVLNML-----SIEALTVGQITEKQ--------GVNKAAVS----RRVKKLLNAELVKL 83 (151)
T ss_dssp TCCHHHHHHHHHH-----HHSCBCHHHHHHHH--------CSCSSHHH----HHHHHHHHTTSEEC
T ss_pred CCCHHHHHHHHHH-----HcCCcCHHHHHHHH--------CCCHHHHH----HHHHHHHHCCCEEe
Confidence 4788999999999 23557888888886 89966776 79999999 79987
No 17
>3bja_A Transcriptional regulator, MARR family, putative; NP_978771.1, putative MARR-like transcription regulator, MAR structural genomics; 2.38A {Bacillus cereus}
Probab=73.52 E-value=2.2 Score=29.91 Aligned_cols=50 Identities=14% Similarity=0.196 Sum_probs=39.1
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|.. +.-+....|++.. +++.+.+. +.+++|.+ ++|.|.
T Consensus 30 ~l~~~~~~iL~~l~~----~~~~~~~ela~~l--------~~~~~tvs----~~l~~L~~~gli~r~ 80 (139)
T 3bja_A 30 DISYVQFGVIQVLAK----SGKVSMSKLIENM--------GCVPSNMT----TMIQRMKRDGYVMTE 80 (139)
T ss_dssp TCCHHHHHHHHHHHH----SCSEEHHHHHHHC--------SSCCTTHH----HHHHHHHHTTSEEEE
T ss_pred CCCHHHHHHHHHHHH----cCCcCHHHHHHHH--------CCChhHHH----HHHHHHHHCCCeeec
Confidence 478889999999954 3457777888875 88866666 78899988 798874
No 18
>2dbb_A Putative HTH-type transcriptional regulator PH006; ASNC family, helix-turn-helix (HTH) domain, structural genom NPPSFA; 2.00A {Pyrococcus horikoshii}
Probab=73.11 E-value=1.3 Score=32.76 Aligned_cols=51 Identities=22% Similarity=0.327 Sum_probs=39.4
Q ss_pred hcccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-ccccc
Q 040944 8 LRYLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHK 74 (188)
Q Consensus 8 ~r~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R 74 (188)
+..|++.|++||..+..+ .-+|...|++.. |+|...+. +++.+|.+ ++|++
T Consensus 4 m~~ld~~d~~il~~L~~~----~~~s~~ela~~l--------g~s~~tv~----~~l~~L~~~G~i~~ 55 (151)
T 2dbb_A 4 MRKLDRVDMQLVKILSEN----SRLTYRELADIL--------NTTRQRIA----RRIDKLKKLGIIRK 55 (151)
T ss_dssp --CCCHHHHHHHHHHHHC----TTCCHHHHHHHT--------TSCHHHHH----HHHHHHHHHTSEEE
T ss_pred hhhCCHHHHHHHHHHHHc----CCCCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCCEEE
Confidence 445889999999999765 347899999987 99855555 78888888 78875
No 19
>4hbl_A Transcriptional regulator, MARR family; HTH, transcription factor, DNA binding; 2.50A {Staphylococcus epidermidis}
Probab=72.97 E-value=1.4 Score=32.01 Aligned_cols=50 Identities=8% Similarity=0.161 Sum_probs=40.1
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|... +-+....|++.. +++...+. +.+++|.+ +||.|.
T Consensus 38 ~lt~~q~~iL~~l~~~----~~~~~~eLa~~l--------~~~~~~vs----~~l~~L~~~Glv~r~ 88 (149)
T 4hbl_A 38 GITYSQYLVMLTLWEE----NPQTLNSIGRHL--------DLSSNTLT----PMLKRLEQSGWVKRE 88 (149)
T ss_dssp TCCHHHHHHHHHHHHS----SSEEHHHHHHHH--------TCCHHHHH----HHHHHHHHHTSEEC-
T ss_pred CCCHHHHHHHHHHHHC----CCCCHHHHHHHH--------CCCHHHHH----HHHHHHHHCCCEeeC
Confidence 4788999999999653 567888888886 88866666 79999999 799985
No 20
>2cfx_A HTH-type transcriptional regulator LRPC; transcriptional regulation, DNA binding, FFRP; 2.4A {Bacillus subtilis} SCOP: a.4.5.32 d.58.4.2
Probab=72.39 E-value=1.5 Score=32.53 Aligned_cols=48 Identities=17% Similarity=0.344 Sum_probs=38.7
Q ss_pred cCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-ccccc
Q 040944 11 LSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHK 74 (188)
Q Consensus 11 L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R 74 (188)
|++.|++||..+..+ .-+|...|++.. |+|.+.+. +++.+|.+ ++|++
T Consensus 3 ld~~d~~il~~L~~~----~~~s~~ela~~l--------g~s~~tv~----~~l~~L~~~G~i~~ 51 (144)
T 2cfx_A 3 LDQIDLNIIEELKKD----SRLSMRELGRKI--------KLSPPSVT----ERVRQLESFGIIKQ 51 (144)
T ss_dssp CCHHHHHHHHHHHHC----SCCCHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEE
T ss_pred CCHHHHHHHHHHHHc----CCCCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCCeEE
Confidence 778899999999765 348999999987 99955555 78889888 78876
No 21
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=72.19 E-value=1.7 Score=37.70 Aligned_cols=27 Identities=22% Similarity=0.064 Sum_probs=21.6
Q ss_pred cccccCcCCcCceeeccC----CCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNASD----KVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~----~~~aiKFh~ 117 (188)
+..+||.|.+|.||.|.+ ..+|+|...
T Consensus 78 ~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~ 108 (346)
T 4fih_A 78 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMD 108 (346)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEE
T ss_pred EeEEeecCcCeEEEEEEECCCCCEEEEEEEe
Confidence 346799999999999933 389999764
No 22
>3g3z_A NMB1585, transcriptional regulator, MARR family; transcription factor, structur genomics, oxford protein production facility; 2.10A {Neisseria meningitidis serogroup B}
Probab=71.79 E-value=2.3 Score=30.40 Aligned_cols=50 Identities=16% Similarity=0.131 Sum_probs=39.4
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|... .-+....|++.. +++.+.+. +.+++|.+ +||.|.
T Consensus 28 ~lt~~q~~iL~~l~~~----~~~t~~eLa~~l--------~~~~~tvs----~~l~~Le~~Glv~r~ 78 (145)
T 3g3z_A 28 DLNYNLFAVLYTLATE----GSRTQKHIGEKW--------SLPKQTVS----GVCKTLAGQGLIEWQ 78 (145)
T ss_dssp TCCHHHHHHHHHHHHH----CSBCHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEC
T ss_pred CCCHHHHHHHHHHHHC----CCCCHHHHHHHH--------CCCHHHHH----HHHHHHHHCCCEeec
Confidence 4788899999999543 237888888886 88866666 79999999 799985
No 23
>2pn6_A ST1022, 150AA long hypothetical transcriptional regulator; LRP/ASNC family Gln binding, structural genomics, NPPSFA; HET: GLN; 1.44A {Sulfolobus tokodaii} PDB: 2efn_A* 2e7x_A* 2e7w_A* 2yx4_A* 2efq_A* 2pmh_A* 2yx7_A* 2efp_A* 2efo_A*
Probab=71.64 E-value=1.2 Score=32.83 Aligned_cols=49 Identities=20% Similarity=0.242 Sum_probs=37.7
Q ss_pred cCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 11 LSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 11 L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
|++.|++||..+..+- -++...|++.. |+|...+. +++.+|.+ ++|++.
T Consensus 1 ld~~~~~il~~L~~~~----~~~~~ela~~l--------g~s~~tv~----~~l~~L~~~G~i~~~ 50 (150)
T 2pn6_A 1 MDEIDLRILKILQYNA----KYSLDEIAREI--------RIPKATLS----YRIKKLEKDGVIKGY 50 (150)
T ss_dssp CCHHHHHHHHHHTTCT----TSCHHHHHHHH--------TSCHHHHH----HHHHHHHHTTSSCCC
T ss_pred CChHHHHHHHHHHHcC----CCCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCcEEEE
Confidence 5677899999886543 47888899886 99955555 78889988 788873
No 24
>2frh_A SARA, staphylococcal accessory regulator A; winged-helix protein, divalent metal binding, transcription; 2.50A {Staphylococcus aureus} SCOP: a.4.5.28 PDB: 2fnp_A 1fzp_D
Probab=71.54 E-value=1.4 Score=31.76 Aligned_cols=52 Identities=17% Similarity=0.277 Sum_probs=39.8
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|.||..|... ...-+....|++.. +++.+.+. +.+++|++ +||.|.
T Consensus 34 ~lt~~q~~vL~~l~~~--~~~~~t~~eLa~~l--------~~~~~tvs----~~l~~Le~~Glv~r~ 86 (127)
T 2frh_A 34 SISFEEFAVLTYISEN--KEKEYYLKDIINHL--------NYKQPQVV----KAVKILSQEDYFDKK 86 (127)
T ss_dssp CCCHHHHHHHHHHHHT--CCSEEEHHHHHHHS--------SSHHHHHH----HHHHHHHHTTSSCCB
T ss_pred CCCHHHHHHHHHHHhc--cCCCcCHHHHHHHH--------CCCHHHHH----HHHHHHHHCCCEEec
Confidence 4788999999999651 11557778888876 88866666 79999999 799885
No 25
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=71.27 E-value=0.96 Score=37.78 Aligned_cols=28 Identities=21% Similarity=0.063 Sum_probs=19.5
Q ss_pred hcccccCcCCcCceeeccC----CCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD----KVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~----~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.+ ..+|+|.-.
T Consensus 16 ~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~ 47 (275)
T 3hyh_A 16 QIVKTLGEGSFGKVKLAYHTTTGQKVALKIIN 47 (275)
T ss_dssp EEEEEEEC---CCEEEEECTTTCCEEEEEEEE
T ss_pred EEEEEEecCcCeEEEEEEECCCCCEEEEEEEe
Confidence 4567899999999999943 389999753
No 26
>3fm5_A Transcriptional regulator; MCSG, PF04017, PSI, MARR, structu genomics, protein structure initiative, midwest center for structural genomics; HET: GOL; 2.00A {Rhodococcus jostii}
Probab=70.28 E-value=1.9 Score=31.08 Aligned_cols=51 Identities=24% Similarity=0.259 Sum_probs=39.1
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|.||..|-. +.+-+....|++.. +++.+.+. +.+++|++ +||.|.
T Consensus 36 glt~~q~~vL~~l~~---~~~~~t~~eLa~~l--------~i~~~tvs----~~l~~Le~~Glv~r~ 87 (150)
T 3fm5_A 36 GLRVRSYSVLVLACE---QAEGVNQRGVAATM--------GLDPSQIV----GLVDELEERGLVVRT 87 (150)
T ss_dssp TCCHHHHHHHHHHHH---STTCCCSHHHHHHH--------TCCHHHHH----HHHHHHHTTTSEEC-
T ss_pred CCCHHHHHHHHHHHh---CCCCcCHHHHHHHH--------CCCHhHHH----HHHHHHHHCCCEEee
Confidence 478889999999853 22347788888886 88866666 79999999 799985
No 27
>3s2w_A Transcriptional regulator, MARR family; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 2.45A {Methanosarcina mazei}
Probab=70.06 E-value=2.1 Score=31.25 Aligned_cols=50 Identities=8% Similarity=0.106 Sum_probs=40.3
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|.||..|.. ++-+....|++.. +++...+. +.+++|++ +||.|.
T Consensus 47 ~lt~~q~~vL~~l~~----~~~~t~~eLa~~l--------~~~~~tvs----~~l~~Le~~Glv~r~ 97 (159)
T 3s2w_A 47 GIGSGQFPFLMRLYR----EDGINQESLSDYL--------KIDKGTTA----RAIQKLVDEGYVFRQ 97 (159)
T ss_dssp TCCTTTHHHHHHHHH----SCSEEHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEE
T ss_pred CCCHHHHHHHHHHHH----CCCCCHHHHHHHH--------CCCHHHHH----HHHHHHHHCCCEEEe
Confidence 488899999999965 3567888888886 88866666 79999999 799885
No 28
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=69.60 E-value=2.7 Score=33.80 Aligned_cols=26 Identities=15% Similarity=0.084 Sum_probs=20.3
Q ss_pred cccccCcCCcCceeeccC---C-CeeEEee
Q 040944 91 QNSEAGRGSEPDRHNASD---K-VGAIIFC 116 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~---~-~~aiKFh 116 (188)
++..||.|.+|.||.|.+ + .+|+|..
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~ 42 (330)
T 2izr_A 13 VGKKIGCGNFGELRLGKNLYTNEYVAIKLE 42 (330)
T ss_dssp EEEECCC-CTTSEEEEEETTTTEEEEEEEE
T ss_pred EEEEeeccCCceEEEEEECCCCcEEEEEEe
Confidence 567899999999999942 2 8999974
No 29
>3cdh_A Transcriptional regulator, MARR family; helix-turn-hleix, structura genomics, PSI-2, protein structure initiative; 2.69A {Silicibacter pomeroyi dss-3}
Probab=69.04 E-value=2.5 Score=30.54 Aligned_cols=50 Identities=12% Similarity=0.212 Sum_probs=38.9
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|- .+.-+....|++.. +++...+. +.+++|.+ ++|.|.
T Consensus 40 ~lt~~~~~iL~~l~----~~~~~t~~ela~~l--------~i~~~tvs----~~l~~Le~~Glv~r~ 90 (155)
T 3cdh_A 40 GLRVPEWRVLACLV----DNDAMMITRLAKLS--------LMEQSRMT----RIVDQMDARGLVTRV 90 (155)
T ss_dssp TCCHHHHHHHHHHS----SCSCBCHHHHHHHT--------TCCHHHHH----HHHHHHHHTTSEEEC
T ss_pred CCCHHHHHHHHHHH----HCCCcCHHHHHHHH--------CCCHHHHH----HHHHHHHHCCCEEec
Confidence 47888999999884 34557788888876 88866666 78999998 799885
No 30
>1tbx_A ORF F-93, hypothetical 11.0 kDa protein; sulfolobus spindle virus, winged helix, fusellovirus; 2.70A {Sulfolobus virus 1} SCOP: a.4.5.48
Probab=68.88 E-value=1.7 Score=29.79 Aligned_cols=61 Identities=7% Similarity=-0.042 Sum_probs=40.6
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhh----hhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccCCCccCCccc
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTR----ASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKDPALNSKKEG 84 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI----~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~~~~~~~YeG 84 (188)
.|+..+|+||..|.. +.-+....| ++.. +++...+. +.+++|++ +||.|.. ......
T Consensus 5 ~lt~~q~~iL~~l~~----~~~~~~~el~~~la~~l--------~is~~tvs----~~l~~Le~~gli~r~~--~~r~~~ 66 (99)
T 1tbx_A 5 PFFYPEAIVLAYLYD----NEGIATYDLYKKVNAEF--------PMSTATFY----DAKKFLIQEGFVKERQ--ERGEKR 66 (99)
T ss_dssp SSBCHHHHHHHHHTT----CTTCBHHHHHHHHHTTS--------CCCHHHHH----HHHHHHHHTTSEEEEE--ETTEEE
T ss_pred CCCHHHHHHHHHHHH----cCCcCHHHHHHHHHHHc--------CCCHHHHH----HHHHHHHHCCCEEEEe--cCCceE
Confidence 377889999999953 344555555 5554 88855665 78999999 7998752 222334
Q ss_pred eehh
Q 040944 85 VSEE 88 (188)
Q Consensus 85 Y~Lt 88 (188)
|.+|
T Consensus 67 ~~LT 70 (99)
T 1tbx_A 67 LYLT 70 (99)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 5555
No 31
>3k2z_A LEXA repressor; winged helix-turn-helix, SOS system, autoca cleavage, DNA damage, DNA repair, DNA replication, DNA-BIND hydrolase; 1.37A {Thermotoga maritima}
Probab=67.90 E-value=1.5 Score=34.32 Aligned_cols=64 Identities=20% Similarity=0.149 Sum_probs=46.3
Q ss_pred ccCccchhHHHHHHhhccCCcc-cchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccCCCccCCccceeh
Q 040944 10 YLSKDDFKVLTAVETGMRNHEI-VPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKDPALNSKKEGVSE 87 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~-VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~~~~~~~YeGY~L 87 (188)
.|++.+..||..|..-++.+.+ .....|++.. |++.+ .+. +.|.+|++ ++|.|. ...+.++++
T Consensus 2 ~lt~~q~~il~~I~~~~~~~g~~~s~~eia~~l--------gl~~~-tv~---~~l~~Le~~G~i~~~---~~~~r~i~~ 66 (196)
T 3k2z_A 2 DLTERQRKVLLFIEEFIEKNGYPPSVREIARRF--------RITPR-GAL---LHLIALEKKGYIERK---NGKPRALRI 66 (196)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSSCCCHHHHHHHH--------TSCHH-HHH---HHHHHHHHTTSEECC------TTCCEE
T ss_pred CcCHHHHHHHHHHHHHHHHhCCCCCHHHHHHHc--------CCCcH-HHH---HHHHHHHHCCCEEec---CCCcceEEe
Confidence 4788999999999888877765 5567888875 99855 343 78999998 688885 344556665
Q ss_pred h
Q 040944 88 E 88 (188)
Q Consensus 88 t 88 (188)
+
T Consensus 67 ~ 67 (196)
T 3k2z_A 67 S 67 (196)
T ss_dssp S
T ss_pred c
Confidence 3
No 32
>3k0l_A Repressor protein; helix-turn-helix, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.35A {Acinetobacter SP}
Probab=67.80 E-value=3 Score=30.64 Aligned_cols=50 Identities=20% Similarity=0.125 Sum_probs=40.1
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|... .-+....|++.. +++...+. +.+++|.+ +||.|.
T Consensus 43 glt~~q~~iL~~l~~~----~~~t~~eLa~~l--------~~~~~tvs----~~l~~Le~~Glv~r~ 93 (162)
T 3k0l_A 43 EISLPQFTALSVLAAK----PNLSNAKLAERS--------FIKPQSAN----KILQDLLANGWIEKA 93 (162)
T ss_dssp TCCHHHHHHHHHHHHC----TTCCHHHHHHHH--------TSCGGGHH----HHHHHHHHTTSEEEE
T ss_pred CCCHHHHHHHHHHHHC----CCCCHHHHHHHH--------CCCHHHHH----HHHHHHHHCcCeEec
Confidence 4788999999998753 357788888886 89866666 79999999 799985
No 33
>2ia0_A Putative HTH-type transcriptional regulator PF086; ASNC, PSI, structural genomics, southeast collaboratory for structural genomics; 2.37A {Pyrococcus furiosus}
Probab=67.73 E-value=2.1 Score=33.20 Aligned_cols=53 Identities=15% Similarity=0.139 Sum_probs=39.8
Q ss_pred HHhcccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-ccccc
Q 040944 6 DVLRYLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHK 74 (188)
Q Consensus 6 e~~r~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R 74 (188)
+....|++.|++||..+..+- -+|...|++.. |+|.+.+. +++++|.+ ++|++
T Consensus 10 ~~~~~ld~~d~~IL~~L~~~~----~~s~~eLA~~l--------glS~~tv~----~~l~~L~~~G~I~~ 63 (171)
T 2ia0_A 10 SSEIHLDDLDRNILRLLKKDA----RLTISELSEQL--------KKPESTIH----FRIKKLQERGVIER 63 (171)
T ss_dssp ----CCCHHHHHHHHHHHHCT----TCCHHHHHHHH--------TSCHHHHH----HHHHHHHHTTSEEE
T ss_pred CCcCCCCHHHHHHHHHHHHcC----CCCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCCEEe
Confidence 345568899999999997653 47999999987 99955555 78989988 68876
No 34
>2gxg_A 146AA long hypothetical transcriptional regulator; winged helix; 1.45A {Sulfolobus tokodaii} PDB: 2eb7_A 2yr2_A 3gez_A 3gf2_A* 3gfi_A 3gfm_A 3gfj_A 3gfl_A
Probab=67.60 E-value=2.1 Score=30.33 Aligned_cols=49 Identities=22% Similarity=0.177 Sum_probs=38.5
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|. +.-+....|++.. +++.+.+. +.+++|.+ +||.|.
T Consensus 34 ~l~~~~~~iL~~l~-----~~~~~~~ela~~l--------~~s~~tvs----~~l~~Le~~glv~r~ 83 (146)
T 2gxg_A 34 NLSYLDFLVLRATS-----DGPKTMAYLANRY--------FVTQSAIT----ASVDKLEEMGLVVRV 83 (146)
T ss_dssp TCCHHHHHHHHHHT-----TSCBCHHHHHHHT--------TCCHHHHH----HHHHHHHHTTSEEEE
T ss_pred CCCHHHHHHHHHHh-----cCCcCHHHHHHHh--------CCCchhHH----HHHHHHHHCCCEEee
Confidence 37888999999985 4557788888876 88866666 78899998 798874
No 35
>2w25_A Probable transcriptional regulatory protein; transcription regulation, mutant, RV3291C, Glu104Ala, DNA-binding; 2.15A {Mycobacterium tuberculosis} PDB: 2vbw_A* 2vbx_A* 2vby_A* 2vbz_A* 2vc0_A 2vc1_A 2w24_A 2ivm_A 2w29_A 2qz8_A
Probab=67.18 E-value=2.1 Score=31.73 Aligned_cols=49 Identities=16% Similarity=0.215 Sum_probs=38.8
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-ccccc
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHK 74 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R 74 (188)
.|++.|++||..+... .-++...|++.. |+|...+. +++.+|.+ ++|++
T Consensus 4 ~ld~~~~~iL~~L~~~----~~~s~~ela~~l--------g~s~~tv~----~~l~~L~~~G~i~~ 53 (150)
T 2w25_A 4 ALDDIDRILVRELAAD----GRATLSELATRA--------GLSVSAVQ----SRVRRLESRGVVQG 53 (150)
T ss_dssp CCCHHHHHHHHHHHHC----TTCCHHHHHHHH--------TSCHHHHH----HHHHHHHHTTSEEE
T ss_pred ccCHHHHHHHHHHHHc----CCCCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCCEEE
Confidence 4788899999998643 358889999987 99955555 78889988 78865
No 36
>2p5v_A Transcriptional regulator, LRP/ASNC family; NMB0573, structu genomics; 1.99A {Neisseria meningitidis} PDB: 2p6s_A 2p6t_A
Probab=67.11 E-value=2.2 Score=32.10 Aligned_cols=50 Identities=16% Similarity=0.288 Sum_probs=39.3
Q ss_pred cccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-ccccc
Q 040944 9 RYLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHK 74 (188)
Q Consensus 9 r~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R 74 (188)
..|++.|++||..+..+-+ ++...|++.. |+|...+. +++.+|.+ ++|++
T Consensus 6 ~~ld~~~~~il~~L~~~~~----~s~~ela~~l--------g~s~~tv~----~~l~~L~~~G~i~~ 56 (162)
T 2p5v_A 6 LTLDKTDIKILQVLQENGR----LTNVELSERV--------ALSPSPCL----RRLKQLEDAGIVRQ 56 (162)
T ss_dssp CCCCHHHHHHHHHHHHCTT----CCHHHHHHHH--------TSCHHHHH----HHHHHHHHTTSEEE
T ss_pred cCCCHHHHHHHHHHHHcCC----CCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCCEee
Confidence 3588899999999876433 6899999987 99855555 78889888 78876
No 37
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=66.80 E-value=2.1 Score=33.14 Aligned_cols=26 Identities=27% Similarity=0.181 Sum_probs=21.1
Q ss_pred hcccccCcCCcCceeeccC---C-CeeEEe
Q 040944 90 QQNSEAGRGSEPDRHNASD---K-VGAIIF 115 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~---~-~~aiKF 115 (188)
.++..||.|.+|.||.|.+ + .+|+|.
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~ 41 (296)
T 4hgt_A 12 RLGRKIGSGSFGDIYLGTDIAAGEEVAIKL 41 (296)
T ss_dssp EEEEEEEECSSSEEEEEEETTTTEEEEEEE
T ss_pred EEeeeecCCCCeEEEEEEEcCCCceEEEEe
Confidence 3567899999999999942 2 899995
No 38
>2nyx_A Probable transcriptional regulatory protein, RV14; alpha/beta, structural genomics, PSI-2; 2.30A {Mycobacterium tuberculosis}
Probab=66.67 E-value=2.3 Score=31.66 Aligned_cols=50 Identities=16% Similarity=0.210 Sum_probs=40.0
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|-. +.-+....|++.. |++...+. +.+++|.+ +||.|.
T Consensus 42 ~lt~~~~~iL~~L~~----~~~~t~~eLa~~l--------~is~~tvs----~~l~~Le~~GlV~r~ 92 (168)
T 2nyx_A 42 NITIPQFRTLVILSN----HGPINLATLATLL--------GVQPSATG----RMVDRLVGAELIDRL 92 (168)
T ss_dssp SCCHHHHHHHHHHHH----HCSEEHHHHHHHH--------TSCHHHHH----HHHHHHHHTTSEEEE
T ss_pred CCCHHHHHHHHHHHH----cCCCCHHHHHHHh--------CCCHHHHH----HHHHHHHHCCCEEec
Confidence 588999999999965 2357888888886 89866666 79999998 799874
No 39
>2cyy_A Putative HTH-type transcriptional regulator PH151; structural genomics, pyrococcus horikosii OT3, NPPSFA; HET: MSE GLN; 1.80A {Pyrococcus horikoshii} SCOP: a.4.5.32 d.58.4.2
Probab=66.10 E-value=2.5 Score=31.45 Aligned_cols=49 Identities=22% Similarity=0.302 Sum_probs=39.1
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-ccccc
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHK 74 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R 74 (188)
.|++.|++||..+..+ .-+|...|++.. |+|...+. +++.+|.+ ++|++
T Consensus 4 ~ld~~~~~il~~L~~~----~~~s~~ela~~l--------g~s~~tv~----~~l~~L~~~G~i~~ 53 (151)
T 2cyy_A 4 PLDEIDKKIIKILQND----GKAPLREISKIT--------GLAESTIH----ERIRKLRESGVIKK 53 (151)
T ss_dssp CCCHHHHHHHHHHHHC----TTCCHHHHHHHH--------CSCHHHHH----HHHHHHHHHTSSCC
T ss_pred CcCHHHHHHHHHHHHc----CCCCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCCeEE
Confidence 4788899999998764 357888999987 99955555 78889988 78876
No 40
>2cg4_A Regulatory protein ASNC; DNA binding, FFRP, LRP family, transcription, DNA- binding, transcription regulation; 2.4A {Escherichia coli} SCOP: a.4.5.32 d.58.4.2
Probab=66.05 E-value=2.3 Score=31.54 Aligned_cols=49 Identities=14% Similarity=0.203 Sum_probs=39.0
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-ccccc
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHK 74 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R 74 (188)
.|++.|++||..+..+ .-+|...|++.. |+|...+. +++.+|.+ ++|++
T Consensus 5 ~ld~~d~~il~~L~~~----~~~s~~ela~~l--------g~s~~tv~----~~l~~L~~~G~i~~ 54 (152)
T 2cg4_A 5 LIDNLDRGILEALMGN----ARTAYAELAKQF--------GVSPETIH----VRVEKMKQAGIITG 54 (152)
T ss_dssp CCCHHHHHHHHHHHHC----TTSCHHHHHHHH--------TSCHHHHH----HHHHHHHHHTSEEE
T ss_pred ccCHHHHHHHHHHHHc----CCCCHHHHHHHH--------CcCHHHHH----HHHHHHHHcCCcce
Confidence 3788899999998765 357889999987 99955555 78989988 78876
No 41
>3hsr_A HTH-type transcriptional regulator SARZ; helix-turn-helix, cysteine disulfide, MARR-family transcript regulator, DNA-binding; 1.90A {Staphylococcus aureus subsp} PDB: 3hse_A 3hrm_A 4gxo_A
Probab=65.63 E-value=1.7 Score=31.16 Aligned_cols=50 Identities=18% Similarity=0.200 Sum_probs=40.0
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|. .++-+....|++.. +++.+.+. +.+++|.+ +||.|.
T Consensus 33 glt~~q~~vL~~l~----~~~~~t~~eLa~~l--------~~~~~tvs----~~l~~L~~~Glv~r~ 83 (140)
T 3hsr_A 33 DLTYTGYIVLMAIE----NDEKLNIKKLGERV--------FLDSGTLT----PLLKKLEKKDYVVRT 83 (140)
T ss_dssp TCCHHHHHHHHHSC----TTCEEEHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEE
T ss_pred CCCHHHHHHHHHHH----HcCCcCHHHHHHHH--------CCChhhHH----HHHHHHHHCCCeEec
Confidence 47889999999884 35668888888886 88866666 79999999 799985
No 42
>3nrv_A Putative transcriptional regulator (MARR/EMRR FAM; PSI-2, protein structure initiati structural genomics; HET: MSE; 2.00A {Acinetobacter SP}
Probab=65.47 E-value=2 Score=30.79 Aligned_cols=50 Identities=6% Similarity=0.171 Sum_probs=38.8
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|.. +.-+....|++.. +++.+.+. +.+++|++ +||.|.
T Consensus 37 ~l~~~~~~iL~~l~~----~~~~t~~ela~~l--------~~~~~tvs----~~l~~Le~~Glv~r~ 87 (148)
T 3nrv_A 37 GIGMTEWRIISVLSS----ASDCSVQKISDIL--------GLDKAAVS----RTVKKLEEKKYIEVN 87 (148)
T ss_dssp TCCHHHHHHHHHHHH----SSSBCHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEC-
T ss_pred CCCHHHHHHHHHHHc----CCCCCHHHHHHHH--------CCCHHHHH----HHHHHHHHCCCEEee
Confidence 588899999999864 3366777788876 88866666 78999999 799885
No 43
>2vn2_A DNAD, chromosome replication initiation protein; DNA replication, primosome; 2.3A {Geobacillus kaustophilus HTA426}
Probab=65.36 E-value=2.3 Score=31.59 Aligned_cols=54 Identities=9% Similarity=0.072 Sum_probs=43.1
Q ss_pred ccCccchhHHHHHHhhc-cCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGM-RNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GM-RnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|.||..|-.-. ....|...+.|++.+ |+++..+. ++|++|.+ +||.|.
T Consensus 29 gLt~~e~~vll~L~~~~~~~~~~ps~~~LA~~l--------~~s~~~V~----~~l~~Le~kGlI~~~ 84 (128)
T 2vn2_A 29 GLGEGELVLLLHMQSFFEEGVLFPTPAELAERM--------TVSAAECM----EMVRRLLQKGMIAIE 84 (128)
T ss_dssp TCCHHHHHHHHHHHHHHTTTCSSCCHHHHHHTS--------SSCHHHHH----HHHHHHHHTTSSEEC
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCCEEEE
Confidence 47889999999887653 355778889999986 99966776 68888888 798875
No 44
>2heo_A Z-DNA binding protein 1; protein DLM1-Z-DNA complex, immune system-DNA complex; 1.70A {Mus musculus} PDB: 1j75_A
Probab=64.85 E-value=2.2 Score=28.55 Aligned_cols=50 Identities=12% Similarity=0.118 Sum_probs=36.6
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-ccccc
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHK 74 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R 74 (188)
.|++.+-+||..+.. +-..+....|++.+ |+|...+. +.|..|.+ ++|..
T Consensus 7 ~m~~~~~~IL~~L~~---~~~~~s~~eLA~~l--------glsr~tv~----~~l~~L~~~G~I~~ 57 (67)
T 2heo_A 7 TGDNLEQKILQVLSD---DGGPVAIFQLVKKC--------QVPKKTLN----QVLYRLKKEDRVSS 57 (67)
T ss_dssp --CHHHHHHHHHHHH---HCSCEEHHHHHHHH--------CSCHHHHH----HHHHHHHHTTSEEE
T ss_pred cccHHHHHHHHHHHH---cCCCcCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCcEec
Confidence 455556789998864 33579999999997 99955555 78888888 67765
No 45
>3e6m_A MARR family transcriptional regulator; APC88769, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; 2.20A {Silicibacter pomeroyi}
Probab=64.46 E-value=2.5 Score=31.07 Aligned_cols=50 Identities=10% Similarity=0.138 Sum_probs=39.7
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|-.. .-+....|++.. +++...+. +.+++|++ +||.|.
T Consensus 50 glt~~q~~vL~~l~~~----~~~t~~eLa~~l--------~~~~~~vs----~~l~~Le~~Glv~r~ 100 (161)
T 3e6m_A 50 KLPTPKLRLLSSLSAY----GELTVGQLATLG--------VMEQSTTS----RTVDQLVDEGLAARS 100 (161)
T ss_dssp TCCHHHHHHHHHHHHH----SEEEHHHHHHHT--------TCCHHHHH----HHHHHHHHTTSEEEC
T ss_pred CCCHHHHHHHHHHHhC----CCCCHHHHHHHH--------CCCHHHHH----HHHHHHHHCCCEEee
Confidence 4788899999999653 457778888876 88866666 79999999 799985
No 46
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=64.44 E-value=2.7 Score=37.60 Aligned_cols=27 Identities=22% Similarity=0.064 Sum_probs=21.7
Q ss_pred cccccCcCCcCceeeccC----CCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNASD----KVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~----~~~aiKFh~ 117 (188)
+..+||.|.+|.||.|.+ ..+|+|...
T Consensus 155 ~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~ 185 (423)
T 4fie_A 155 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMD 185 (423)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEE
T ss_pred eeeEeccCcCcEEEEEEECCCCCEEEEEEEe
Confidence 446799999999999933 389999764
No 47
>2a61_A Transcriptional regulator TM0710; APC4350, MCSG, midwest center for structural genomics, PSI, protein structure initiative, MARR; 1.80A {Thermotoga maritima} SCOP: a.4.5.28
Probab=64.40 E-value=2.4 Score=29.97 Aligned_cols=50 Identities=10% Similarity=0.098 Sum_probs=39.6
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|.. +.-+....|++.. +++.+.+. +.+++|.+ ++|.+.
T Consensus 30 ~l~~~~~~iL~~l~~----~~~~~~~~la~~l--------~~s~~tvs----~~l~~L~~~glv~r~ 80 (145)
T 2a61_A 30 GITPAQFDILQKIYF----EGPKRPGELSVLL--------GVAKSTVT----GLVKRLEADGYLTRT 80 (145)
T ss_dssp TCCHHHHHHHHHHHH----HCCBCHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEE
T ss_pred CCCHHHHHHHHHHHH----cCCCCHHHHHHHH--------CCCchhHH----HHHHHHHHCCCeeec
Confidence 478889999999975 3457788888876 88866666 78899999 798884
No 48
>3boq_A Transcriptional regulator, MARR family; MARR famil structural genomics, PSI-2, protein structure initiative; 2.39A {Silicibacter pomeroyi dss-3}
Probab=64.30 E-value=3.3 Score=29.95 Aligned_cols=51 Identities=14% Similarity=0.130 Sum_probs=40.0
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|.. .+.-+....|++.. +++...+. +.+++|.+ +||.|.
T Consensus 44 ~l~~~~~~iL~~L~~---~~~~~~~~ela~~l--------~i~~~tvs----~~l~~Le~~Gli~r~ 95 (160)
T 3boq_A 44 GLSLAKFDAMAQLAR---NPDGLSMGKLSGAL--------KVTNGNVS----GLVNRLIKDGMVVKA 95 (160)
T ss_dssp SCCHHHHHHHHHHHH---CTTCEEHHHHHHHC--------SSCCSCHH----HHHHHHHHHTSEEEC
T ss_pred CCCHHHHHHHHHHHH---cCCCCCHHHHHHHH--------CCChhhHH----HHHHHHHHCCCEEee
Confidence 588899999999942 23457888888876 89866676 78999999 799885
No 49
>3bpv_A Transcriptional regulator; MARR, DNA binding, transcription factor, winged helix motif, DNA-binding; 1.40A {Methanobacterium thermoautotrophicum} PDB: 3bpx_A*
Probab=63.90 E-value=2.8 Score=29.41 Aligned_cols=50 Identities=12% Similarity=0.135 Sum_probs=39.5
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|.||..|..+ .-+....|++.. +++.+.+. +.+++|.+ ++|.+.
T Consensus 26 ~l~~~~~~iL~~l~~~----~~~~~~ela~~l--------~~s~~tvs----~~l~~L~~~glv~~~ 76 (138)
T 3bpv_A 26 NLTDAQVACLLRIHRE----PGIKQDELATFF--------HVDKGTIA----RTLRRLEESGFIERE 76 (138)
T ss_dssp TCCHHHHHHHHHHHHS----TTCBHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEE
T ss_pred CCCHHHHHHHHHHHHc----CCCCHHHHHHHH--------CCCHHHHH----HHHHHHHHCCCEEee
Confidence 4788899999999763 557788888886 88866666 68999998 799884
No 50
>3f3x_A Transcriptional regulator, MARR family, putative; DNA binding protein, DNA-binding, transcription regulation; 1.90A {Sulfolobus solfataricus}
Probab=63.65 E-value=2.3 Score=30.37 Aligned_cols=49 Identities=20% Similarity=0.181 Sum_probs=38.5
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|..+- - ....|++.. +++.+.+. +.+++|++ +||.|.
T Consensus 34 ~lt~~~~~iL~~l~~~~----~-~~~~la~~l--------~~~~~tvs----~~l~~Le~~Glv~r~ 83 (144)
T 3f3x_A 34 NLSYLDFSILKATSEEP----R-SMVYLANRY--------FVTQSAIT----AAVDKLEAKGLVRRI 83 (144)
T ss_dssp SCCHHHHHHHHHHHHSC----E-EHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEE
T ss_pred CCCHHHHHHHHHHHHCC----C-CHHHHHHHH--------CCChhHHH----HHHHHHHHCCCEEec
Confidence 57899999999996532 2 677777775 89866666 78999999 799885
No 51
>2qww_A Transcriptional regulator, MARR family; YP_013417.1, multiple antibiotic-resistance repressor (MARR) structural genomics; HET: MSE; 2.07A {Listeria monocytogenes str}
Probab=63.39 E-value=4.4 Score=29.11 Aligned_cols=49 Identities=12% Similarity=0.097 Sum_probs=38.9
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-ccccc
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHK 74 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R 74 (188)
.|+..+|+||..|-.. .-+....|++.. +++...+. +.+++|.+ +||.|
T Consensus 38 ~lt~~~~~iL~~l~~~----~~~t~~eLa~~l--------~~~~~tvs----~~l~~Le~~Glv~r 87 (154)
T 2qww_A 38 GLTIQQLAMINVIYST----PGISVADLTKRL--------IITGSSAA----ANVDGLISLGLVVK 87 (154)
T ss_dssp TCCHHHHHHHHHHHHS----TTEEHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEE
T ss_pred CCCHHHHHHHHHHHHC----CCCCHHHHHHHH--------CCCHHHHH----HHHHHHHHCCCEEe
Confidence 4788899999998653 447788888886 88866666 78999998 79988
No 52
>3eco_A MEPR; mutlidrug efflux pump regulator winged helix-turn-helix motif, DNA-binding, transcription, transcription regulation; 2.40A {Staphylococcus aureus} SCOP: a.4.5.0
Probab=63.10 E-value=3.4 Score=29.20 Aligned_cols=52 Identities=10% Similarity=0.052 Sum_probs=40.1
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|... ..+-+....|++.. +++.+.+. +.+++|++ +||.|.
T Consensus 28 ~lt~~~~~vL~~l~~~--~~~~~t~~ela~~l--------~~~~~tvs----~~l~~Le~~Gli~r~ 80 (139)
T 3eco_A 28 DITNEQGHTLGYLYAH--QQDGLTQNDIAKAL--------QRTGPTVS----NLLRNLERKKLIYRY 80 (139)
T ss_dssp TCCHHHHHHHHHHHHS--TTTCEEHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEE
T ss_pred CCCHHHHHHHHHHHhc--CCCCcCHHHHHHHh--------CCCcccHH----HHHHHHHHCCCEeec
Confidence 3788899999999652 12467778888886 88866666 79999999 799885
No 53
>3hrs_A Metalloregulator SCAR; DTXR/MNTR family member, transcription; 2.70A {Streptococcus gordonii} PDB: 3hrt_A 3hru_A
Probab=62.93 E-value=3.7 Score=32.83 Aligned_cols=53 Identities=17% Similarity=0.124 Sum_probs=42.1
Q ss_pred HHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccCCCccCCccceehh
Q 040944 19 LTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKDPALNSKKEGVSEE 88 (188)
Q Consensus 19 L~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~~~~~~~YeGY~Lt 88 (188)
|.+|-.-......+....|++.. +++.+.+. +.+++|.+ +||.|. +|.++.||
T Consensus 8 L~~I~~l~~~~~~~~~~~lA~~l--------~vs~~tvs----~~l~~Le~~GlV~r~-----~~~~i~LT 61 (214)
T 3hrs_A 8 LKCLYELGTRHNKITNKEIAQLM--------QVSPPAVT----EMMKKLLAEELLIKD-----KKAGYLLT 61 (214)
T ss_dssp HHHHHHTTSSCSCCCHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEE-----TTTEEEEC
T ss_pred HHHHHHHHhcCCCcCHHHHHHHH--------CCChhHHH----HHHHHHHHCCCEEEe-----cCCCeEEC
Confidence 66776666678889999999986 99977777 69999999 799984 35677777
No 54
>3jw4_A Transcriptional regulator, MARR/EMRR family; DNA-binding protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Clostridium acetobutylicum} SCOP: a.4.5.0
Probab=62.85 E-value=3 Score=30.02 Aligned_cols=52 Identities=15% Similarity=0.105 Sum_probs=35.8
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|.... ..-+....|++.. +++.+.+. +.+++|.+ +||.|.
T Consensus 38 glt~~q~~vL~~l~~~~--~~~~t~~eLa~~l--------~~~~~~vs----~~l~~L~~~Glv~r~ 90 (148)
T 3jw4_A 38 GLNSQQGRMIGYIYENQ--ESGIIQKDLAQFF--------GRRGASIT----SMLQGLEKKGYIERR 90 (148)
T ss_dssp TCCHHHHHHHHHHHHHT--TTCCCHHHHHHC--------------CHH----HHHHHHHHTTSBCCC
T ss_pred CCCHHHHHHHHHHHhCC--CCCCCHHHHHHHH--------CCChhHHH----HHHHHHHHCCCEEee
Confidence 47889999999997632 1457777888876 88866666 79999999 799885
No 55
>3deu_A Transcriptional regulator SLYA; MARR, WING-helix, transcription regulator, activator, DNA-binding, repressor; HET: SAL; 2.30A {Salmonella typhimurium} SCOP: a.4.5.28
Probab=62.56 E-value=3.3 Score=30.97 Aligned_cols=51 Identities=22% Similarity=0.259 Sum_probs=40.1
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|.. ..+-+....|++.. +++...+. +.+++|++ +||.|.
T Consensus 50 glt~~q~~vL~~L~~---~~~~~t~~eLa~~l--------~i~~~tvs----~~l~~Le~~GlV~r~ 101 (166)
T 3deu_A 50 ELTQTHWVTLHNIHQ---LPPDQSQIQLAKAI--------GIEQPSLV----RTLDQLEDKGLISRQ 101 (166)
T ss_dssp TCCHHHHHHHHHHHH---SCSSEEHHHHHHHH--------TSCHHHHH----HHHHHHHHTTSEEEC
T ss_pred CCCHHHHHHHHHHHH---cCCCCCHHHHHHHH--------CCCHhhHH----HHHHHHHHCCCEEee
Confidence 478889999999965 13447888888886 88866666 79999999 799985
No 56
>3nqo_A MARR-family transcriptional regulator; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE PG4; 2.20A {Clostridium difficile}
Probab=62.32 E-value=4 Score=31.23 Aligned_cols=55 Identities=13% Similarity=0.131 Sum_probs=42.7
Q ss_pred HhcccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 7 VLRYLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 7 ~~r~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.+..|+..+|.||..|... .++-++...|++.. +++...+. +.+++|.+ +||.|.
T Consensus 35 ~~~~lt~~q~~vL~~L~~~--~~~~~t~~eLa~~l--------~is~~tvs----~~l~~Le~~GlV~r~ 90 (189)
T 3nqo_A 35 YFGILTSRQYMTILSILHL--PEEETTLNNIARKM--------GTSKQNIN----RLVANLEKNGYVDVI 90 (189)
T ss_dssp HHCSSCHHHHHHHHHHHHS--CGGGCCHHHHHHHH--------TSCHHHHH----HHHHHHHHTTSEEEE
T ss_pred HHccCCHHHHHHHHHHHhc--cCCCcCHHHHHHHH--------CCCHHHHH----HHHHHHHHCCCEEec
Confidence 3446999999999999752 13567788888886 89866666 78999999 799885
No 57
>3bj6_A Transcriptional regulator, MARR family; helix-turn-helix, trasnscription regulator, STR genomics, PSI-2, protein structure initiative; 2.01A {Silicibacter pomeroyi dss-3}
Probab=61.91 E-value=4.6 Score=28.81 Aligned_cols=50 Identities=6% Similarity=0.055 Sum_probs=38.8
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|..+ .-+....|++.. |++...+. +.+++|.+ +||.|.
T Consensus 37 ~lt~~~~~iL~~l~~~----~~~t~~ela~~l--------~~~~~~vs----~~l~~Le~~Glv~r~ 87 (152)
T 3bj6_A 37 GVTVGQRAILEGLSLT----PGATAPQLGAAL--------QMKRQYIS----RILQEVQRAGLIERR 87 (152)
T ss_dssp TCCHHHHHHHHHHHHS----TTEEHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEE
T ss_pred CCCHHHHHHHHHHHhC----CCCCHHHHHHHH--------CCCHHHHH----HHHHHHHHCCCeeec
Confidence 4788899999999652 346777888876 88866666 78999988 799885
No 58
>1lj9_A Transcriptional regulator SLYA; HTH DNA binding protein, structural genomics, PSI, protein structure initiative; 1.60A {Enterococcus faecalis} SCOP: a.4.5.28
Probab=61.50 E-value=4.4 Score=28.64 Aligned_cols=50 Identities=18% Similarity=0.157 Sum_probs=39.3
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|.. +.-+....|++.. +++.+.+. +.+++|.+ ++|.|.
T Consensus 26 ~lt~~~~~iL~~l~~----~~~~t~~~la~~l--------~~s~~~vs----~~l~~Le~~gli~r~ 76 (144)
T 1lj9_A 26 SLTRGQYLYLVRVCE----NPGIIQEKIAELI--------KVDRTTAA----RAIKRLEEQGFIYRQ 76 (144)
T ss_dssp TCTTTHHHHHHHHHH----STTEEHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEE
T ss_pred CCCHHHHHHHHHHHH----CcCcCHHHHHHHH--------CCCHhHHH----HHHHHHHHCCCEEee
Confidence 478899999999865 3457788888876 88866666 78999988 798875
No 59
>2rdp_A Putative transcriptional regulator MARR; PFAM PF01047, winged-helix binding motif, structural genomics, PSI-2; 2.30A {Geobacillus stearothermophilus}
Probab=61.03 E-value=3.1 Score=29.70 Aligned_cols=50 Identities=10% Similarity=0.153 Sum_probs=38.8
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|-. +.-+....|++.. +++...+. +.+++|.+ +||.|.
T Consensus 39 ~l~~~~~~iL~~l~~----~~~~t~~ela~~l--------~~~~~tvs----~~l~~Le~~Glv~r~ 89 (150)
T 2rdp_A 39 PITPPQFVALQWLLE----EGDLTVGELSNKM--------YLACSTTT----DLVDRMERNGLVARV 89 (150)
T ss_dssp SSCHHHHHHHHHHHH----HCSBCHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEE
T ss_pred CCCHHHHHHHHHHHH----cCCCCHHHHHHHH--------CCCchhHH----HHHHHHHHCCCeeec
Confidence 478889999999875 2457777888875 88866666 78999998 798874
No 60
>2e1c_A Putative HTH-type transcriptional regulator PH151; DNA-binding, transcriptional regulatory protein, archaeal; HET: DNA; 2.10A {Pyrococcus horikoshii} SCOP: a.4.5.32 d.58.4.2 PDB: 1ri7_A* 2zny_A* 2znz_A*
Probab=60.40 E-value=3.6 Score=31.89 Aligned_cols=50 Identities=22% Similarity=0.248 Sum_probs=39.7
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|++.|++||.++...- -+|...|++.. |+|...+. +++.+|.+ ++|++.
T Consensus 24 ~ld~~d~~IL~~L~~~~----~~s~~eLA~~l--------glS~~tv~----~rl~~L~~~G~I~~~ 74 (171)
T 2e1c_A 24 PLDEIDKKIIKILQNDG----KAPLREISKIT--------GLAESTIH----ERIRKLRESGVIKKF 74 (171)
T ss_dssp CCCHHHHHHHHHHHHCT----TCCHHHHHHHH--------TSCHHHHH----HHHHHHHHTTSSCCC
T ss_pred CCCHHHHHHHHHHHHcC----CCCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCCeEee
Confidence 58899999999997642 47888899886 99855555 78889988 788763
No 61
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=59.89 E-value=2.8 Score=32.60 Aligned_cols=26 Identities=27% Similarity=0.181 Sum_probs=21.1
Q ss_pred hcccccCcCCcCceeeccC---C-CeeEEe
Q 040944 90 QQNSEAGRGSEPDRHNASD---K-VGAIIF 115 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~---~-~~aiKF 115 (188)
.++..||.|.+|.||.|.+ + .+|+|.
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~ 41 (296)
T 3uzp_A 12 RLGRKIGSGSFGDIYLGTDIAAGEEVAIKL 41 (296)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTEEEEEEE
T ss_pred EEEEEEccCCCeEEEEEEEcCCCcEEEEEE
Confidence 3567899999999999942 2 899996
No 62
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=59.85 E-value=6.7 Score=31.55 Aligned_cols=30 Identities=20% Similarity=-0.015 Sum_probs=23.4
Q ss_pred hcccccCcCCcCceeeccC---C-CeeEEeeehh
Q 040944 90 QQNSEAGRGSEPDRHNASD---K-VGAIIFCEYF 119 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~---~-~~aiKFh~~~ 119 (188)
.++..||.|.+|.||.|.+ + .+|+|.-+..
T Consensus 46 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~ 79 (320)
T 3a99_A 46 QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 79 (320)
T ss_dssp EEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGG
T ss_pred EEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecc
Confidence 4668899999999999932 2 7999976543
No 63
>2bcx_B Ryanodine receptor 1; EF-hand, type-2 turn, calcium binding protein; 2.00A {Gallus gallus}
Probab=59.65 E-value=8.9 Score=23.39 Aligned_cols=19 Identities=53% Similarity=0.548 Sum_probs=14.8
Q ss_pred hHHHHHHHHHHHHHHHHhh
Q 040944 142 DAELVKQIEKQRRRAVAAV 160 (188)
Q Consensus 142 ~~~l~k~l~kqr~~a~aaa 160 (188)
.+.-.|-+++|||||+-|-
T Consensus 4 k~~w~~~~s~qRKRaVvac 22 (30)
T 2bcx_B 4 KAVWHKLLSKQRRRAVVAC 22 (30)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHhhHHHHHHHHHH
Confidence 3456688999999998764
No 64
>1sfx_A Conserved hypothetical protein AF2008; structural genomics, HTH MOT protein structure initiative, midwest center for structural genomics; 1.55A {Archaeoglobus fulgidus} SCOP: a.4.5.50
Probab=59.42 E-value=3.5 Score=27.59 Aligned_cols=50 Identities=8% Similarity=0.073 Sum_probs=38.1
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|++.+++||..+... .-+....|++.. |++...+. +.|++|.+ ++|.+.
T Consensus 17 ~l~~~~~~il~~l~~~----~~~s~~ela~~l--------~is~~tv~----~~l~~L~~~glv~~~ 67 (109)
T 1sfx_A 17 SFKPSDVRIYSLLLER----GGMRVSEIAREL--------DLSARFVR----DRLKVLLKRGFVRRE 67 (109)
T ss_dssp CCCHHHHHHHHHHHHH----CCBCHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEE
T ss_pred CCCHHHHHHHHHHHHc----CCCCHHHHHHHH--------CCCHHHHH----HHHHHHHHCCCEEEE
Confidence 3678899999998542 347778888886 89866665 78888888 788874
No 65
>2y75_A HTH-type transcriptional regulator CYMR; DNA binding protein; 2.00A {Bacillus subtilis}
Probab=58.52 E-value=4.1 Score=29.51 Aligned_cols=74 Identities=5% Similarity=0.046 Sum_probs=44.9
Q ss_pred hhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccCCCccCCccceehhhhcccc
Q 040944 16 FKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKDPALNSKKEGVSEENQQNSE 94 (188)
Q Consensus 16 fRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~~~~~~~YeGY~Lt~alG~~ 94 (188)
+++|..+-..- ..+.++...|++.. |+|...+. +.+..|.+ +||... .+..-||++.... ..
T Consensus 12 l~iL~~la~~~-~~~~~s~~ela~~~--------~i~~~~v~----~il~~L~~~Glv~~~---~g~~ggy~L~~~~-~~ 74 (129)
T 2y75_A 12 LTIMIELAKKH-GEGPTSLKSIAQTN--------NLSEHYLE----QLVSPLRNAGLVKSI---RGAYGGYVLGSEP-DA 74 (129)
T ss_dssp HHHHHHHHHTT-TSCCBCHHHHHHHT--------TSCHHHHH----HHHHHHHHTTSEEEC-------CCEEESSCG-GG
T ss_pred HHHHHHHHhCC-CCCcCCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCceEec---CCCCCceEeCCCH-HH
Confidence 34555443221 24789999999986 88844444 78888988 788864 3445789987332 22
Q ss_pred cCcCCcCceeeccCC
Q 040944 95 AGRGSEPDRHNASDK 109 (188)
Q Consensus 95 IGVGKESDVYea~~~ 109 (188)
|- =.|||.+..+
T Consensus 75 it---l~di~~~~e~ 86 (129)
T 2y75_A 75 IT---AGDIIRVLEG 86 (129)
T ss_dssp CB---HHHHHHHHHC
T ss_pred Cc---HHHHHHHHcC
Confidence 32 2467777544
No 66
>1jgs_A Multiple antibiotic resistance protein MARR; transcription regulation, DNA-binding, repressor, transcription; HET: SAL; 2.30A {Escherichia coli} SCOP: a.4.5.28
Probab=58.49 E-value=3.8 Score=28.80 Aligned_cols=50 Identities=12% Similarity=0.113 Sum_probs=37.9
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|.. +.-+....|++.. +++.+.+. +.+++|.+ +||.|.
T Consensus 31 ~lt~~~~~iL~~l~~----~~~~~~~~la~~l--------~~~~~tvs----~~l~~L~~~gli~r~ 81 (138)
T 1jgs_A 31 DITAAQFKVLCSIRC----AACITPVELKKVL--------SVDLGALT----RMLDRLVCKGWVERL 81 (138)
T ss_dssp TSCHHHHHHHHHHHH----HSSBCHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEE
T ss_pred CCCHHHHHHHHHHHh----cCCCCHHHHHHHH--------CCChHHHH----HHHHHHHHCCCEEec
Confidence 378889999999864 2345667777775 88866666 68899988 798874
No 67
>3bdd_A Regulatory protein MARR; putative multiple antibiotic-resistance repressor, structura genomics, joint center for structural genomics, JCSG; 2.20A {Streptococcus suis}
Probab=58.47 E-value=3.8 Score=28.71 Aligned_cols=50 Identities=10% Similarity=0.070 Sum_probs=38.8
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|-.+ .-+....|++.. +++...+. +.+++|.+ ++|.+.
T Consensus 28 ~l~~~~~~iL~~l~~~----~~~~~~ela~~l--------~is~~~vs----~~l~~L~~~gli~~~ 78 (142)
T 3bdd_A 28 GISLTRYSILQTLLKD----APLHQLALQERL--------QIDRAAVT----RHLKLLEESGYIIRK 78 (142)
T ss_dssp SSCHHHHHHHHHHHHH----CSBCHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEE
T ss_pred CCCHHHHHHHHHHHhC----CCCCHHHHHHHH--------CCCHHHHH----HHHHHHHHCCCEEec
Confidence 5788999999998652 347777788875 88866666 78899998 798875
No 68
>1s3j_A YUSO protein; structural genomics, MARR transcriptional regulator family, PSI, protein structure initiative; HET: MSE; 2.25A {Bacillus subtilis} SCOP: a.4.5.28
Probab=58.24 E-value=3.5 Score=29.55 Aligned_cols=50 Identities=14% Similarity=0.155 Sum_probs=39.2
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|.. +.-+....|++.. +++...+. +.+++|.+ +||.|.
T Consensus 34 ~l~~~~~~iL~~l~~----~~~~t~~ela~~l--------~~s~~tvs----~~l~~Le~~glv~r~ 84 (155)
T 1s3j_A 34 GVTPAQLFVLASLKK----HGSLKVSEIAERM--------EVKPSAVT----LMADRLEQKNLIART 84 (155)
T ss_dssp TCCHHHHHHHHHHHH----HSEEEHHHHHHHH--------TSCHHHHH----HHHHHHHHTTSEEEE
T ss_pred CCCHHHHHHHHHHHH----cCCCCHHHHHHHH--------CCCHHHHH----HHHHHHHHCCCEeec
Confidence 578889999999965 3457778888876 88866666 78899988 798875
No 69
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=57.85 E-value=3.6 Score=31.92 Aligned_cols=37 Identities=14% Similarity=-0.007 Sum_probs=27.0
Q ss_pred Cccceehh---hhcccccCcCCcCceeeccCC----CeeEEeee
Q 040944 81 KKEGVSEE---NQQNSEAGRGSEPDRHNASDK----VGAIIFCE 117 (188)
Q Consensus 81 ~YeGY~Lt---~alG~~IGVGKESDVYea~~~----~~aiKFh~ 117 (188)
.|+.|.+. -.++..||.|.+|.||.|.+. .+|+|.-+
T Consensus 4 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~ 47 (288)
T 3kfa_A 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK 47 (288)
T ss_dssp TCCTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEEC
T ss_pred chhcccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecC
Confidence 35566655 356688999999999999433 68888643
No 70
>4b8x_A SCO5413, possible MARR-transcriptional regulator; winged helix motif; HET: CME; 1.25A {Streptomyces coelicolor}
Probab=57.63 E-value=3.7 Score=30.24 Aligned_cols=51 Identities=14% Similarity=0.203 Sum_probs=38.9
Q ss_pred cCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 11 LSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 11 L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
|+..+|+||..+-.. .+.-++...|++.. +++...+. +.+++|++ +||.|.
T Consensus 33 Lt~~q~~vL~~L~~~--~~~~~t~~eLa~~l--------~~~~~tvs----~~v~~Le~~Glv~r~ 84 (147)
T 4b8x_A 33 LTFARYEALVLLTFS--KSGELPMSKIGERL--------MVHPTSVT----NTVDRLVRSGLVAKR 84 (147)
T ss_dssp CCHHHHHHHHHHHTS--GGGEEEHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEE
T ss_pred CCHHHHHHHHHHHHC--CCCCcCHHHHHHHH--------CCCHHHHH----HHHHHHHhCCCEEEe
Confidence 778889999887432 23457777888886 88866666 79999999 799985
No 71
>1z91_A Organic hydroperoxide resistance transcriptional; OHRR, MARR family, bacterial transcription factor, DNA bindi protein; 2.50A {Bacillus subtilis} SCOP: a.4.5.28 PDB: 1z9c_A*
Probab=57.46 E-value=4.6 Score=28.66 Aligned_cols=50 Identities=10% Similarity=0.145 Sum_probs=38.8
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|.||..|... .-+....|++.. +++...+. +.+++|.+ +||.|.
T Consensus 37 ~l~~~~~~iL~~l~~~----~~~~~~~la~~l--------~~~~~tvs----~~l~~L~~~glv~r~ 87 (147)
T 1z91_A 37 NITYPQYLALLLLWEH----ETLTVKKMGEQL--------YLDSGTLT----PMLKRMEQQGLITRK 87 (147)
T ss_dssp CCCHHHHHHHHHHHHH----SEEEHHHHHHTT--------TCCHHHHH----HHHHHHHHHTSEECC
T ss_pred CCCHHHHHHHHHHHHC----CCCCHHHHHHHH--------CCCcCcHH----HHHHHHHHCCCEEec
Confidence 3778899999998753 357777788875 88866666 78999999 799885
No 72
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=57.44 E-value=3 Score=33.35 Aligned_cols=29 Identities=21% Similarity=0.087 Sum_probs=22.6
Q ss_pred hcccccCcCCcCceeeccC----CCeeEEeeeh
Q 040944 90 QQNSEAGRGSEPDRHNASD----KVGAIIFCEY 118 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~----~~~aiKFh~~ 118 (188)
.++..||.|.+|.||.|.+ ..+|+|....
T Consensus 13 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~ 45 (322)
T 2ycf_A 13 IMSKTLGSGACGEVKLAFERKTCKKVAIKIISK 45 (322)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECC
T ss_pred eEeeEEecCCCEEEEEEEEcCCCcEEEEEEeeh
Confidence 3567899999999999933 2799997643
No 73
>2bv6_A MGRA, HTH-type transcriptional regulator MGRA; multidrug resistance regulator, virulence determinant, transcriptional factors; 2.8A {Staphylococcus aureus} SCOP: a.4.5.28
Probab=57.44 E-value=6.6 Score=27.74 Aligned_cols=50 Identities=16% Similarity=0.199 Sum_probs=38.8
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|..+ .-+....|++.. +++...+. +.+++|.+ +||.|.
T Consensus 34 ~l~~~~~~iL~~l~~~----~~~~~~ela~~l--------~~~~~tvs----~~l~~L~~~gli~r~ 84 (142)
T 2bv6_A 34 NLTYPQFLVLTILWDE----SPVNVKKVVTEL--------ALDTGTVS----PLLKRMEQVDLIKRE 84 (142)
T ss_dssp TCCHHHHHHHHHHHHS----SEEEHHHHHHHT--------TCCTTTHH----HHHHHHHHTTSEEEE
T ss_pred CCCHHHHHHHHHHHHc----CCcCHHHHHHHH--------CCChhhHH----HHHHHHHHCCCEEee
Confidence 4788899999998652 347777888875 88866666 68889998 798875
No 74
>2fbi_A Probable transcriptional regulator; MARR, APC5816, structural genomic protein structure initiative; 2.10A {Pseudomonas aeruginosa} SCOP: a.4.5.28
Probab=57.29 E-value=3.5 Score=28.91 Aligned_cols=50 Identities=14% Similarity=0.207 Sum_probs=38.8
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|-.. .-+....|++.. +++...+. +.+++|.+ ++|.|.
T Consensus 33 ~lt~~~~~iL~~l~~~----~~~t~~ela~~l--------~~s~~~vs----~~l~~Le~~glv~r~ 83 (142)
T 2fbi_A 33 GLTEQQWRVIRILRQQ----GEMESYQLANQA--------CILRPSMT----GVLARLERDGIVRRW 83 (142)
T ss_dssp TCCHHHHHHHHHHHHH----CSEEHHHHHHHT--------TCCHHHHH----HHHHHHHHTTSEEEE
T ss_pred CCCHHHHHHHHHHHHc----CCCCHHHHHHHH--------CCCHhHHH----HHHHHHHHCCCEEee
Confidence 4788899999998652 347778888875 88866666 78999998 799875
No 75
>1ub9_A Hypothetical protein PH1061; helix-turn-helix motif, winged helix motif, structural genom transcription; 2.05A {Pyrococcus horikoshii} SCOP: a.4.5.28
Probab=57.22 E-value=3.6 Score=27.57 Aligned_cols=61 Identities=10% Similarity=0.073 Sum_probs=40.4
Q ss_pred CccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccCC-CccCCccceehh
Q 040944 12 SKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKDP-ALNSKKEGVSEE 88 (188)
Q Consensus 12 ~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~~-~~~~~YeGY~Lt 88 (188)
++-+++||..+-. ++-.....|++.. |++.+.+. +.|++|.+ ++|.+.. +.......|++|
T Consensus 15 ~~~~~~iL~~L~~----~~~~~~~ela~~l--------~is~~tvs----~~l~~L~~~gli~~~~~~~~~r~~~~~lt 77 (100)
T 1ub9_A 15 NPVRLGIMIFLLP----RRKAPFSQIQKVL--------DLTPGNLD----SHIRVLERNGLVKTYKVIADRPRTVVEIT 77 (100)
T ss_dssp SHHHHHHHHHHHH----HSEEEHHHHHHHT--------TCCHHHHH----HHHHHHHHTTSEEEEEECSSSCEEEEEEC
T ss_pred ChHHHHHHHHHHh----cCCcCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCCEEEEecCCCcceEEEEEC
Confidence 4667889988853 2346777788875 89866666 78889988 7888631 012234556666
No 76
>2hr3_A Probable transcriptional regulator; MCSG, structural genomics, PSI-2, protein structure initiati midwest center for structural genomics; 2.40A {Pseudomonas aeruginosa} SCOP: a.4.5.28
Probab=57.20 E-value=3.1 Score=29.55 Aligned_cols=50 Identities=16% Similarity=0.127 Sum_probs=38.3
Q ss_pred cCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 11 LSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 11 L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
|+..+|+||..|... +.-+....|++.. |++.+.+. +.+++|.+ +||.|.
T Consensus 33 l~~~~~~iL~~l~~~---~~~~~~~~la~~l--------~i~~~~vs----~~l~~Le~~glv~r~ 83 (147)
T 2hr3_A 33 VQFSQLVVLGAIDRL---GGDVTPSELAAAE--------RMRSSNLA----ALLRELERGGLIVRH 83 (147)
T ss_dssp HHHHHHHHHHHHHHT---TSCBCHHHHHHHT--------TCCHHHHH----HHHHHHHHTTSEEEE
T ss_pred CCHHHHHHHHHHHHc---CCCCCHHHHHHHh--------CCChhhHH----HHHHHHHHCCCEeeC
Confidence 567789999998751 3457788888875 88866666 78999998 799875
No 77
>2wte_A CSA3; antiviral protein, viral resistance, winged helix-turn-helix prnai nucleotide-binding domain; HET: MSE; 1.80A {Sulfolobus solfataricus}
Probab=57.12 E-value=4.9 Score=33.34 Aligned_cols=59 Identities=15% Similarity=0.186 Sum_probs=43.4
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccCCCccCCccceehh
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKDPALNSKKEGVSEE 88 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~~~~~~~YeGY~Lt 88 (188)
.|++.+|+||.++... .-+.+..|++.. |++.+.+. +.+++|.+ ++|.+. .....|++|
T Consensus 149 ~L~~~~~~IL~~L~~~----~~~s~~eLA~~l--------glsksTv~----r~L~~Le~~GlV~r~----~r~~~~~LT 208 (244)
T 2wte_A 149 DYSREEMKLLNVLYET----KGTGITELAKML--------DKSEKTLI----NKIAELKKFGILTQK----GKDRKVELN 208 (244)
T ss_dssp CCCHHHHHHHHHHHHH----TCBCHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEE----TTTTEEEEC
T ss_pred CCCHHHHHHHHHHHHc----CCCCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCCEEEe----CCccEEEEC
Confidence 6888999999998432 237788888886 99855555 78999998 799874 223456766
No 78
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=57.11 E-value=5 Score=31.15 Aligned_cols=27 Identities=11% Similarity=0.053 Sum_probs=21.5
Q ss_pred hcccccCcCCcCceeeccCC--CeeEEee
Q 040944 90 QQNSEAGRGSEPDRHNASDK--VGAIIFC 116 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~--~~aiKFh 116 (188)
.++..||.|.+|.||.|... .+|+|.-
T Consensus 6 ~~~~~lg~G~~g~V~~~~~~~~~vavK~~ 34 (303)
T 3gxj_A 6 VLQESIGKGRFGEVWRGKWRGEEVAVKIF 34 (303)
T ss_dssp CCCEEEEECSSSEEEEC-CTTSCEEEEEC
T ss_pred eehhhccCCCCeEEEEEEEcCcceEEEEe
Confidence 35678999999999999433 8999974
No 79
>3cjn_A Transcriptional regulator, MARR family; silicibacter pomeroy structural genomics, PSI-2, protein structure initiative; 1.95A {Silicibacter pomeroyi dss-3}
Probab=56.69 E-value=4.5 Score=29.36 Aligned_cols=50 Identities=14% Similarity=0.261 Sum_probs=39.2
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|.||..|.. +.-+....|++.. +++...+. +.+++|.+ +||.|.
T Consensus 49 ~lt~~~~~iL~~l~~----~~~~t~~ela~~l--------~is~~tvs----~~l~~Le~~Gli~r~ 99 (162)
T 3cjn_A 49 GLSTAKMRALAILSA----KDGLPIGTLGIFA--------VVEQSTLS----RALDGLQADGLVRRE 99 (162)
T ss_dssp TCCHHHHHHHHHHHH----SCSEEHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEE
T ss_pred CCCHHHHHHHHHHHH----CCCCCHHHHHHHH--------CCChhHHH----HHHHHHHHCCCEEec
Confidence 378889999999964 3457788888876 88866666 78999999 699874
No 80
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=56.51 E-value=4.4 Score=33.82 Aligned_cols=27 Identities=22% Similarity=0.101 Sum_probs=19.3
Q ss_pred cccccCcCCcCceeeccC--------C-CeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNASD--------K-VGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~--------~-~~aiKFh~ 117 (188)
++.+||.|.+|.||.|.. + .+|+|..+
T Consensus 17 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~ 52 (299)
T 4asz_A 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLK 52 (299)
T ss_dssp EEEEEEC--CCCEEEEEECSCC----CEEEEEEEEC
T ss_pred EeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeC
Confidence 567899999999999931 2 68999754
No 81
>4aik_A Transcriptional regulator SLYA; transcription, transcription factor; 1.85A {Yersinia pseudotuberculosis} PDB: 4aih_A 4aij_A 3qpt_A* 3q5f_A*
Probab=56.45 E-value=4.3 Score=30.18 Aligned_cols=51 Identities=22% Similarity=0.249 Sum_probs=36.8
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|.||..|... .+-.....|++.. +++.+.+. +.+++|++ +||.|.
T Consensus 28 gLt~~q~~vL~~L~~~---~~~~~~~eLa~~l--------~~~~~tvs----~~v~~Le~~GlV~R~ 79 (151)
T 4aik_A 28 ELTQTHWVTLYNINRL---PPEQSQIQLAKAI--------GIEQPSLV----RTLDQLEEKGLITRH 79 (151)
T ss_dssp CCCHHHHHHHHHHHHS---CTTSCHHHHHHHH--------TSCHHHHH----HHHHHHHHTTSEEEE
T ss_pred CCCHHHHHHHHHHHHc---CCCCcHHHHHHHH--------CcCHHHHH----HHHHHHHhCCCeEee
Confidence 3788899999998531 1223334566665 88866777 79999999 799985
No 82
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=56.30 E-value=4.5 Score=31.44 Aligned_cols=27 Identities=22% Similarity=0.176 Sum_probs=21.5
Q ss_pred hcccccCcCCcCceeecc---CC-CeeEEee
Q 040944 90 QQNSEAGRGSEPDRHNAS---DK-VGAIIFC 116 (188)
Q Consensus 90 alG~~IGVGKESDVYea~---~~-~~aiKFh 116 (188)
.++..||.|.+|.||.|. ++ .+|+|.-
T Consensus 13 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~ 43 (298)
T 1csn_A 13 KVGRRIGEGSFGVIFEGTNLLNNQQVAIKFE 43 (298)
T ss_dssp EEEEEEEECSSCEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEeecCCEEEEEEEECCCCcEEEEEEe
Confidence 356789999999999994 22 8999963
No 83
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=56.22 E-value=3.7 Score=34.48 Aligned_cols=27 Identities=15% Similarity=-0.023 Sum_probs=20.9
Q ss_pred hcccccCcCCcCceeecc--------C-CCeeEEee
Q 040944 90 QQNSEAGRGSEPDRHNAS--------D-KVGAIIFC 116 (188)
Q Consensus 90 alG~~IGVGKESDVYea~--------~-~~~aiKFh 116 (188)
.+..+||.|.+|.||.|. . ..+|||.-
T Consensus 29 ~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l 64 (308)
T 4gt4_A 29 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL 64 (308)
T ss_dssp EEEEEEEECSSCEEEEEEEC-------CEEEEEEEC
T ss_pred eEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEE
Confidence 345789999999999983 1 16899974
No 84
>2eth_A Transcriptional regulator, putative, MAR family; MARR family, structural genomics, joint center for structura genomics, JCSG; 2.30A {Thermotoga maritima} SCOP: a.4.5.28
Probab=55.58 E-value=4.7 Score=29.22 Aligned_cols=50 Identities=12% Similarity=0.139 Sum_probs=38.2
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|-.. .-+....|++.. +++.+.+. +.+++|.+ +||.|.
T Consensus 41 ~lt~~~~~iL~~l~~~----~~~t~~ela~~l--------~is~~tvs----~~l~~Le~~Gli~r~ 91 (154)
T 2eth_A 41 DMKTTELYAFLYVALF----GPKKMKEIAEFL--------STTKSNVT----NVVDSLEKRGLVVRE 91 (154)
T ss_dssp HSBHHHHHHHHHHHHH----CCBCHHHHHHHT--------TSCHHHHH----HHHHHHHHTTSEEEE
T ss_pred CCCHHHHHHHHHHHHc----CCCCHHHHHHHH--------CCCHHHHH----HHHHHHHHCCCEEee
Confidence 4788899999998652 246777788875 88866666 78899998 698874
No 85
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=55.21 E-value=4.8 Score=31.59 Aligned_cols=27 Identities=11% Similarity=-0.089 Sum_probs=21.6
Q ss_pred hcccccCcCCcCceeeccC--CCeeEEee
Q 040944 90 QQNSEAGRGSEPDRHNASD--KVGAIIFC 116 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~--~~~aiKFh 116 (188)
-.|..||.|..|.||.|.. ..+|+|..
T Consensus 34 ~~~~~lg~G~~g~Vy~~~~~~~~vavK~~ 62 (307)
T 2nru_A 34 VGGNKMGEGGFGVVYKGYVNNTTVAVKKL 62 (307)
T ss_dssp TTCCEEEECSSEEEEEEESSSCEEEEEEE
T ss_pred ccCCccccCCCeEEEEEEECCceEEEEEE
Confidence 3568899999999999933 37888864
No 86
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=54.75 E-value=4.8 Score=32.56 Aligned_cols=27 Identities=15% Similarity=0.159 Sum_probs=21.1
Q ss_pred hcccccCcCCcCceeeccC----CCeeEEee
Q 040944 90 QQNSEAGRGSEPDRHNASD----KVGAIIFC 116 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~----~~~aiKFh 116 (188)
.++..||.|.+|.||.|.+ ..+|+|..
T Consensus 20 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~ 50 (351)
T 3mi9_A 20 EKLAKIGQGTFGEVFKARHRKTGQKVALKKV 50 (351)
T ss_dssp EEEEECSSCSTTSEEEEEETTTCCEEEEEEC
T ss_pred eEEEEEecCCCcEEEEEEECCCCCEEEEEEE
Confidence 3557899999999999933 27899853
No 87
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=53.98 E-value=5 Score=31.83 Aligned_cols=28 Identities=18% Similarity=0.201 Sum_probs=22.1
Q ss_pred hcccccCcCCcCceeecc----CCCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|. +..+|+|..+
T Consensus 39 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~ 70 (330)
T 3nsz_A 39 QLVRKLGRGKYSEVFEAINITNNEKVVVKILK 70 (330)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEC
T ss_pred EEEEEecccCCeEEEEEEECCCCcEEEEEEec
Confidence 456789999999999993 2389999754
No 88
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=53.79 E-value=4.8 Score=32.37 Aligned_cols=29 Identities=14% Similarity=-0.015 Sum_probs=23.8
Q ss_pred hcccccCcCCcCceeeccCC-CeeEEeeeh
Q 040944 90 QQNSEAGRGSEPDRHNASDK-VGAIIFCEY 118 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~-~~aiKFh~~ 118 (188)
.++..||.|.+|.||.|... .+|+|..+.
T Consensus 39 ~~~~~lG~G~~g~Vy~~~~~~~~avk~~k~ 68 (307)
T 3lb7_A 39 MLSTRIGSGSFGTVYKGKWHGDVAVKILKV 68 (307)
T ss_dssp CEEEEEEECSSCEEEEEESSSEEEEEECCC
T ss_pred EEEeEecCCCCeEEEEEEECCEEEEEEEec
Confidence 56788999999999999554 788887664
No 89
>2pex_A Transcriptional regulator OHRR; transcription regulator; 1.90A {Xanthomonas campestris} PDB: 2pfb_A
Probab=53.60 E-value=5.5 Score=28.62 Aligned_cols=50 Identities=6% Similarity=0.069 Sum_probs=37.9
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|-. ++-+....|++.. +++...+. +.+++|++ +||.|.
T Consensus 44 ~l~~~~~~iL~~l~~----~~~~t~~ela~~l--------~~s~~tvs----~~l~~Le~~glv~r~ 94 (153)
T 2pex_A 44 DLTYPQYLVMLVLWE----TDERSVSEIGERL--------YLDSATLT----PLLKRLQAAGLVTRT 94 (153)
T ss_dssp TCCHHHHHHHHHHHH----SCSEEHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEE
T ss_pred CCCHHHHHHHHHHHh----CCCcCHHHHHHHh--------CCCcccHH----HHHHHHHHCCCEeec
Confidence 367888999998864 3446777778775 88855666 78999999 799874
No 90
>4fx0_A Probable transcriptional repressor protein; helix-turn-helix, DNA binding, transcription regulator; 2.70A {Mycobacterium tuberculosis} PDB: 4fx4_A*
Probab=53.56 E-value=4.7 Score=29.89 Aligned_cols=52 Identities=12% Similarity=0.204 Sum_probs=35.4
Q ss_pred cCccchhHHHHHHhhc-cCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-ccccc
Q 040944 11 LSKDDFKVLTAVETGM-RNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHK 74 (188)
Q Consensus 11 L~~~DfRVL~AIE~GM-RnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R 74 (188)
|+..+|.||..|...- ...+-+....|++.. +++.+.+. +.+++|++ +||++
T Consensus 31 Lt~~q~~vL~~l~~~~~~~~~~~t~~eLa~~l--------~~~~~tvs----r~v~~Le~~glVr~ 84 (148)
T 4fx0_A 31 LTNTQFSTLAVISLSEGSAGIDLTMSELAARI--------GVERTTLT----RNLEVMRRDGLVRV 84 (148)
T ss_dssp CCHHHHHHHHHHHC---------CHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSBC-
T ss_pred CCHHHHHHHHHHHHhcCCCCCCcCHHHHHHHH--------CCChhhHH----HHHHHHHHCCCEEe
Confidence 7788999999986543 234457777788876 88866777 79999999 69955
No 91
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=53.48 E-value=5.2 Score=34.86 Aligned_cols=28 Identities=18% Similarity=0.012 Sum_probs=22.3
Q ss_pred hcccccCcCCcCceeecc----CCCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|. +..+|+|..+
T Consensus 57 ~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~ 88 (398)
T 4b99_A 57 EIIETIGNGAYGVVSSARRRLTGQQVAIKKIP 88 (398)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEET
T ss_pred EEEEEEecccCeEEEEEEECCCCCEEEEEEEC
Confidence 355789999999999993 3389999753
No 92
>2fbk_A Transcriptional regulator, MARR family; winged-helix-turn-helix; 2.30A {Deinococcus radiodurans} SCOP: a.4.5.28
Probab=53.24 E-value=11 Score=28.29 Aligned_cols=53 Identities=15% Similarity=0.115 Sum_probs=39.8
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|-..-. .+-+....|++.. +++...+. +.+++|++ +||.|.
T Consensus 66 glt~~~~~iL~~L~~~~~-~~~~t~~eLa~~l--------~is~~tvs----~~l~~Le~~GlV~r~ 119 (181)
T 2fbk_A 66 GLNAAGWDLLLTLYRSAP-PEGLRPTELSALA--------AISGPSTS----NRIVRLLEKGLIERR 119 (181)
T ss_dssp TCCHHHHHHHHHHHHHCC-SSCBCHHHHHHHC--------SCCSGGGS----SHHHHHHHHTSEECC
T ss_pred CCCHHHHHHHHHHHHcCC-CCCCCHHHHHHHH--------CCCHHHHH----HHHHHHHHCcCEEec
Confidence 378889999999875321 2246777778775 88866777 79999999 799885
No 93
>2nnn_A Probable transcriptional regulator; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=52.94 E-value=4.9 Score=28.07 Aligned_cols=50 Identities=12% Similarity=0.199 Sum_probs=38.5
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|... .-+....|++.. |++...+. +.+++|.+ ++|.+.
T Consensus 35 ~l~~~~~~iL~~l~~~----~~~t~~ela~~l--------~~~~~tvs----~~l~~L~~~glv~r~ 85 (140)
T 2nnn_A 35 GLTPTQWAALVRLGET----GPCPQNQLGRLT--------AMDAATIK----GVVERLDKRGLIQRS 85 (140)
T ss_dssp CCCHHHHHHHHHHHHH----SSBCHHHHHHHT--------TCCHHHHH----HHHHHHHHTTCEEEE
T ss_pred CCCHHHHHHHHHHHHc----CCCCHHHHHHHH--------CCCHHHHH----HHHHHHHHCCCEEee
Confidence 5788899999999542 356777778775 88866666 78899998 798874
No 94
>3t8r_A Staphylococcus aureus CYMR; transcriptional regulator protein, dimer, sulfenic acid, UNK function; 1.70A {Staphylococcus aureus} PDB: 3t8t_A
Probab=52.82 E-value=8.9 Score=28.92 Aligned_cols=76 Identities=9% Similarity=0.090 Sum_probs=48.6
Q ss_pred cchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccCCCccCCccceehhhhcc
Q 040944 14 DDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKDPALNSKKEGVSEENQQN 92 (188)
Q Consensus 14 ~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~~~~~~~YeGY~Lt~alG 92 (188)
.-.|+|..+-.. ...+.|+.+.|++.. ++|...+. +.+.+|.+ +||... .++.-||+|....
T Consensus 12 yAl~~L~~La~~-~~~~~~s~~~IA~~~--------~i~~~~l~----kil~~L~~aGlv~s~---rG~~GGy~Lar~p- 74 (143)
T 3t8r_A 12 YGLTLMISLAKK-EGQGCISLKSIAEEN--------NLSDLYLE----QLVGPLRNAGLIRSV---RGAKGGYQLRVPA- 74 (143)
T ss_dssp HHHHHHHHHHTT-TTSCCEEHHHHHHHT--------TCCHHHHH----HHHHHHHHTTSEEEC---SSSSSEEEESSCG-
T ss_pred HHHHHHHHHHhC-CCCCCcCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCEEEec---CCCCCCeeecCCc-
Confidence 334555555432 233589999999986 88844444 79999998 788864 4666799988322
Q ss_pred cccCcCCcCceeeccCC
Q 040944 93 SEAGRGSEPDRHNASDK 109 (188)
Q Consensus 93 ~~IGVGKESDVYea~~~ 109 (188)
..|- =.||+.+..+
T Consensus 75 ~~It---l~dV~~aveg 88 (143)
T 3t8r_A 75 EEIS---AGDIIRLLEG 88 (143)
T ss_dssp GGCB---HHHHHHHHHC
T ss_pred ccCC---HHHHHHHhCC
Confidence 2222 2467777554
No 95
>3bro_A Transcriptional regulator; helix_TURN_helix, multiple antibiotic resistance protein (MA structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.04A {Oenococcus oeni} SCOP: a.4.5.28
Probab=52.60 E-value=7.1 Score=27.35 Aligned_cols=52 Identities=12% Similarity=0.119 Sum_probs=39.4
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|-..- .+-+....|++.. +++...+. +.+++|.+ +||.|.
T Consensus 31 ~lt~~~~~iL~~l~~~~--~~~~~~~ela~~l--------~~~~~tvs----~~l~~Le~~Gli~r~ 83 (141)
T 3bro_A 31 DLTGTQMTIIDYLSRNK--NKEVLQRDLESEF--------SIKSSTAT----VLLQRMEIKKLLYRK 83 (141)
T ss_dssp TCCHHHHHHHHHHHHTT--TSCCBHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEE
T ss_pred CCCHHHHHHHHHHHHCC--CCCcCHHHHHHHH--------CCCcchHH----HHHHHHHHCCCEEee
Confidence 37888999999986531 1257788888886 88866666 78999999 799875
No 96
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=52.53 E-value=7.1 Score=34.67 Aligned_cols=28 Identities=18% Similarity=0.118 Sum_probs=22.3
Q ss_pred hcccccCcCCcCceeecc----CCCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|. +..+|+|..+
T Consensus 10 ~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~ 41 (483)
T 3sv0_A 10 RLGRKIGSGSFGEIYLGTNIQTNEEVAIKLEN 41 (483)
T ss_dssp ECCCCCEECSSCEEEEEEETTTCCEEEEEEEE
T ss_pred EEEEEEeeCCCEEEEEEEECCCCcEEEEEEec
Confidence 356789999999999994 3389999643
No 97
>3pqk_A Biofilm growth-associated repressor; helix-turn-helix motif, winged-helix fold, transcriptional R DNA binding, transcription; 2.09A {Xylella fastidiosa} PDB: 3pqj_A
Probab=51.86 E-value=9.9 Score=26.17 Aligned_cols=63 Identities=16% Similarity=0.189 Sum_probs=40.9
Q ss_pred HhcccC-ccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccCCCccCCccc
Q 040944 7 VLRYLS-KDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKDPALNSKKEG 84 (188)
Q Consensus 7 ~~r~L~-~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~~~~~~~YeG 84 (188)
.++.|. +-.++||..+..| + +....|++.. |++.+.+. +.|..|.. +||.+.. .+...-
T Consensus 16 ~~~~l~~~~r~~Il~~L~~~----~-~~~~ela~~l--------~is~~tvs----~~L~~L~~~Glv~~~~--~g~~~~ 76 (102)
T 3pqk_A 16 LLKTLSHPVRLMLVCTLVEG----E-FSVGELEQQI--------GIGQPTLS----QQLGVLRESGIVETRR--NIKQIF 76 (102)
T ss_dssp HHHHHCSHHHHHHHHHHHTC----C-BCHHHHHHHH--------TCCTTHHH----HHHHHHHHTTSEEEEC--SSSCCE
T ss_pred HHHHcCCHHHHHHHHHHHhC----C-CCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCCeEEEE--eCCEEE
Confidence 344443 4556688888543 2 6777788876 99966666 68888887 7887641 344555
Q ss_pred eehh
Q 040944 85 VSEE 88 (188)
Q Consensus 85 Y~Lt 88 (188)
|+++
T Consensus 77 y~l~ 80 (102)
T 3pqk_A 77 YRLT 80 (102)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 6665
No 98
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=51.57 E-value=4.6 Score=31.78 Aligned_cols=28 Identities=21% Similarity=0.109 Sum_probs=20.1
Q ss_pred hcccccCcCCcCceeeccC---C-CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD---K-VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~---~-~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.+ + .+|+|...
T Consensus 16 ~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~ 47 (298)
T 2zv2_A 16 TLKDEIGKGSYGVVKLAYNENDNTYYAMKVLS 47 (298)
T ss_dssp EEEEEEEC--CCEEEEEEETTTTEEEEEEEEE
T ss_pred EEEeEEeecCCEEEEEEEECCCCcEEEEEEee
Confidence 3557899999999999932 2 78999764
No 99
>1ylf_A RRF2 family protein; structural genomics, transcription regulator, P protein structure initiative; 2.50A {Bacillus cereus atcc 14579} SCOP: a.4.5.55
Probab=51.53 E-value=8.2 Score=29.04 Aligned_cols=73 Identities=10% Similarity=0.037 Sum_probs=48.1
Q ss_pred chhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccCCCccCCccceehhhhccc
Q 040944 15 DFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKDPALNSKKEGVSEENQQNS 93 (188)
Q Consensus 15 DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~~~~~~~YeGY~Lt~alG~ 93 (188)
-.|+|..+-. ...+.|+...|++.. ++|...+. +.+.+|.+ +||... .+ .-||++.... .
T Consensus 16 Al~~L~~La~--~~~~~~~~~~iA~~~--------~i~~~~l~----kil~~L~~~Glv~s~---rG-~GGy~L~~~p-~ 76 (149)
T 1ylf_A 16 AVHILSILKN--NPSSLCTSDYMAESV--------NTNPVVIR----KIMSYLKQAGFVYVN---RG-PGGAGLLKDL-H 76 (149)
T ss_dssp HHHHHHHHHH--SCGGGCCHHHHHHHH--------TSCHHHHH----HHHHHHHHTTSEEEC-------CCEEESSCG-G
T ss_pred HHHHHHHHHh--CCCCCcCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCcEEEc---cC-CCceEeCCCh-h
Confidence 4566666654 234789999999986 88844444 78989999 798864 34 7789988332 2
Q ss_pred ccCcCCcCceeeccCC
Q 040944 94 EAGRGSEPDRHNASDK 109 (188)
Q Consensus 94 ~IGVGKESDVYea~~~ 109 (188)
.|-+ +|||.+..+
T Consensus 77 ~Itl---~dVi~a~e~ 89 (149)
T 1ylf_A 77 EITL---LDVYHAVNV 89 (149)
T ss_dssp GCBH---HHHHHHHCC
T ss_pred hCcH---HHHHHHHcc
Confidence 2333 478888655
No 100
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=51.42 E-value=5.2 Score=34.46 Aligned_cols=28 Identities=25% Similarity=0.266 Sum_probs=22.5
Q ss_pred hcccccCcCCcCceeeccC----CCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD----KVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~----~~~aiKFh~ 117 (188)
.++.+||.|.+|.||.|.+ ..+|+|.-+
T Consensus 61 ~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~ 92 (336)
T 4g3f_A 61 THQPRVGRGSFGEVHRMKDKQTGFQCAVKKVR 92 (336)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEE
T ss_pred EeCcEeccCCCeEEEEEEECCCCCEEEEEEEC
Confidence 4567899999999999933 389999764
No 101
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=51.35 E-value=8.2 Score=30.45 Aligned_cols=28 Identities=21% Similarity=0.140 Sum_probs=22.4
Q ss_pred hcccccCcCCcCceeeccCC----CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASDK----VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~----~~aiKFh~ 117 (188)
.+...||.|.+|.||.|.+. .+|+|...
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~ 43 (308)
T 3g33_A 12 EPVAEIGVGAYGTVYKARDPHSGHFVALKSVR 43 (308)
T ss_dssp EEEEEECCSSSCCEEEEECTTTCCEEEEEEEE
T ss_pred EEEEEEecCCCeEEEEEEECCCCcEEEEEEEe
Confidence 35578999999999999532 78999764
No 102
>1hsj_A Fusion protein consisting of staphylococcus accessary regulator protein R and maltose...; novel fold for DNA binding; HET: GLC; 2.30A {Escherichia coli} SCOP: a.4.5.28 c.94.1.1
Probab=51.14 E-value=5 Score=34.50 Aligned_cols=51 Identities=10% Similarity=0.153 Sum_probs=38.4
Q ss_pred cCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 11 LSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 11 L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
|+..+|+||..|-.. .-+=+....|.+.. +++...+. +.|+||++ +||.|.
T Consensus 402 lt~~q~~vl~~l~~~--~~~~~~~~~l~~~~--------~~~~~~~t----~~~~~le~~g~v~r~ 453 (487)
T 1hsj_A 402 LNYEEIYILNHILRS--ESNEISSKEIAKCS--------EFKPYYLT----KALQKLKDLKLLSKK 453 (487)
T ss_dssp CCHHHHHHHHHHHTC--SCSEEEHHHHHHSS--------CCCHHHHH----HHHHHHHTTTTSCCE
T ss_pred CCHHHHHHHHHHHhC--CCCCcCHHHHHHHH--------CCCHHHHH----HHHHHHHHCCCEeec
Confidence 788899999998531 00346777788875 88866666 89999999 699885
No 103
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=51.01 E-value=4.8 Score=34.37 Aligned_cols=28 Identities=25% Similarity=0.094 Sum_probs=22.6
Q ss_pred hcccccCcCCcCceeecc----CCCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|. +..+|+|.-.
T Consensus 35 ~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~ 66 (311)
T 4aw0_A 35 KFGKILGEGSFSTVVLARELATSREYAIKILE 66 (311)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEE
T ss_pred EEEEEEecccCeEEEEEEECCCCCEEEEEEEE
Confidence 356889999999999993 3389999864
No 104
>3cuo_A Uncharacterized HTH-type transcriptional regulato; DNA-binding transcriptional regulator, structural genomics, MCSG; 2.00A {Escherichia coli K12}
Probab=50.87 E-value=7.1 Score=26.09 Aligned_cols=64 Identities=11% Similarity=0.148 Sum_probs=41.8
Q ss_pred HhcccC-ccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccCCCccCCccc
Q 040944 7 VLRYLS-KDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKDPALNSKKEG 84 (188)
Q Consensus 7 ~~r~L~-~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~~~~~~~YeG 84 (188)
.++.|. +..++||..+.. +.-+....|++.. |++...+. +.|.+|.+ ++|.+.. .+.+.-
T Consensus 17 ~~~~l~~~~~~~il~~l~~----~~~~s~~ela~~l--------~is~~tvs----~~l~~L~~~glv~~~~--~~r~~~ 78 (99)
T 3cuo_A 17 LLKAMSHPKRLLILCMLSG----SPGTSAGELTRIT--------GLSASATS----QHLARMRDEGLIDSQR--DAQRIL 78 (99)
T ss_dssp HHHHHCSHHHHHHHHHHTT----CCSEEHHHHHHHH--------CCCHHHHH----HHHHHHHHTTSEEEEE--CSSCEE
T ss_pred HHHHhCChHHHHHHHHHHh----CCCcCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCCEEEEe--cCCEEE
Confidence 344443 567788888743 4457778888876 88855555 68888888 7887642 333445
Q ss_pred eehh
Q 040944 85 VSEE 88 (188)
Q Consensus 85 Y~Lt 88 (188)
|+++
T Consensus 79 y~l~ 82 (99)
T 3cuo_A 79 YSIK 82 (99)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 6665
No 105
>3k69_A Putative transcription regulator; putative transcriptional regulator, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.95A {Lactobacillus plantarum} SCOP: a.4.5.0
Probab=50.77 E-value=11 Score=29.24 Aligned_cols=73 Identities=11% Similarity=0.035 Sum_probs=48.6
Q ss_pred chhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccCCCccCCccceehhhhccc
Q 040944 15 DFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKDPALNSKKEGVSEENQQNS 93 (188)
Q Consensus 15 DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~~~~~~~YeGY~Lt~alG~ 93 (188)
-.|+|..+-. ...++|+.+.|++.. ++|..-+. +.+.+|.+ +||... .++.-||+|...- .
T Consensus 14 Alr~l~~La~--~~~~~~s~~~IA~~~--------~is~~~l~----kil~~L~~aGlv~s~---rG~~GGy~Lar~p-~ 75 (162)
T 3k69_A 14 AVHSILYLDA--HRDSKVASRELAQSL--------HLNPVMIR----NILSVLHKHGYLTGT---VGKNGGYQLDLAL-A 75 (162)
T ss_dssp HHHHHHHHHT--TTTSCBCHHHHHHHH--------TSCGGGTH----HHHHHHHHTTSSEEE---CSTTCEEECCSCG-G
T ss_pred HHHHHHHHHh--CCCCCcCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCCEEee---cCCCCCeEecCCh-h
Confidence 3455555543 345789999999986 88844444 79999999 788764 4666789988322 2
Q ss_pred ccCcCCcCceeeccC
Q 040944 94 EAGRGSEPDRHNASD 108 (188)
Q Consensus 94 ~IGVGKESDVYea~~ 108 (188)
.|-+ .|||.+..
T Consensus 76 ~Itl---~dIi~ave 87 (162)
T 3k69_A 76 DMNL---GDLYDLTI 87 (162)
T ss_dssp GSBH---HHHHHHHS
T ss_pred hCcH---HHHHHHHc
Confidence 2322 46777754
No 106
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=50.72 E-value=7.5 Score=30.44 Aligned_cols=27 Identities=26% Similarity=0.012 Sum_probs=20.9
Q ss_pred cccccCcCCcCceeecc----CCCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
+...||.|.+|.||.|. +..+|+|...
T Consensus 10 ~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~ 40 (332)
T 3qd2_B 10 PIQCMGRGGFGVVFEAKNKVDDCNYAIKRIR 40 (332)
T ss_dssp EEEEEECC-CSEEEEEEETTTCCEEEEEEEE
T ss_pred eeeEecCCCCeEEEEEEEcCCCcEEEEEEee
Confidence 45789999999999993 2379999865
No 107
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=50.25 E-value=5.6 Score=31.21 Aligned_cols=28 Identities=14% Similarity=-0.007 Sum_probs=23.0
Q ss_pred hcccccCcCCcCceeeccCC-CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASDK-VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~-~~aiKFh~ 117 (188)
.++..||.|.+|.||.|... .+|+|.-+
T Consensus 27 ~~~~~lG~G~~g~Vy~~~~~~~vavK~~~ 55 (289)
T 3og7_A 27 TVGQRIGSGSFGTVYKGKWHGDVAVKMLN 55 (289)
T ss_dssp EEEEEEEECSSEEEEEEESSSEEEEEEES
T ss_pred eeeeEecCCCCeEEEEEEEcCceEEEEEe
Confidence 46688999999999999544 78888765
No 108
>2g9w_A Conserved hypothetical protein; DNA-binding domain, bacterial transcription repressor, DNA B protein; 1.80A {Mycobacterium tuberculosis} SCOP: a.4.5.39
Probab=49.24 E-value=7.5 Score=28.50 Aligned_cols=57 Identities=11% Similarity=0.067 Sum_probs=40.0
Q ss_pred hcccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 8 LRYLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 8 ~r~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
+..|++.+|.||..|-.. ++-+....|.+.. ..+.+++...+. ..|++|.+ +||.|.
T Consensus 4 ~~~lt~~e~~vL~~L~~~---~~~~t~~el~~~l----~~~~~~~~~Tvt----~~l~rLe~kGlv~r~ 61 (138)
T 2g9w_A 4 LTRLGDLERAVMDHLWSR---TEPQTVRQVHEAL----SARRDLAYTTVM----AVLQRLAKKNLVLQI 61 (138)
T ss_dssp GGGCCHHHHHHHHHHHTC---SSCEEHHHHHHHH----TTTCCCCHHHHH----HHHHHHHHTTSEEEE
T ss_pred cccCCHHHHHHHHHHHhc---CCCCCHHHHHHHH----hccCCCCHHHHH----HHHHHHHHCCCEEEE
Confidence 567999999999998642 3457778888764 011235544444 78999999 699984
No 109
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=49.16 E-value=7.7 Score=32.97 Aligned_cols=29 Identities=21% Similarity=0.084 Sum_probs=22.8
Q ss_pred hcccccCcCCcCceeeccC----CCeeEEeeeh
Q 040944 90 QQNSEAGRGSEPDRHNASD----KVGAIIFCEY 118 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~----~~~aiKFh~~ 118 (188)
.++..||.|.+|.||.|.+ ..+|+|...-
T Consensus 138 ~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~ 170 (419)
T 3i6u_A 138 IMSKTLGSGACGEVKLAFERKTCKKVAIRIISK 170 (419)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEEG
T ss_pred EEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEe
Confidence 4567899999999999932 3899998654
No 110
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=48.60 E-value=6 Score=33.60 Aligned_cols=28 Identities=7% Similarity=-0.067 Sum_probs=23.1
Q ss_pred hcccccCcCCcCceeecc----CCCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
.+|..||.|.+|.||.|. +..+|+|...
T Consensus 81 ~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~ 112 (413)
T 3dzo_A 81 VRGTVLGQEDPYAYLEATDQETGESFEVHVPY 112 (413)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEC
T ss_pred EEecccccCCCEEEEEEEecCCCCceEEEEEe
Confidence 456789999999999994 3389999765
No 111
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=48.18 E-value=9.8 Score=31.15 Aligned_cols=28 Identities=11% Similarity=-0.126 Sum_probs=21.1
Q ss_pred hcccccCcCCcCceeeccC---------CCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD---------KVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~---------~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.+ ..+|+|.-.
T Consensus 38 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~ 74 (364)
T 3op5_A 38 KVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEP 74 (364)
T ss_dssp EEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEE
T ss_pred EEEEEEecCCCeEEEEeeecCccccccccceEEEEee
Confidence 4568899999999999922 378999843
No 112
>3u2r_A Regulatory protein MARR; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, helix-turn-helix; 2.20A {Planctomyces limnophilus}
Probab=48.01 E-value=6.7 Score=28.88 Aligned_cols=52 Identities=17% Similarity=0.167 Sum_probs=36.8
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|.||..|...- -+-+....|++.. +++...+. +.+++|++ +||.|.
T Consensus 43 glt~~q~~vL~~l~~~~--~~~~t~~eLa~~l--------~~~~~tvs----~~l~~Le~~Glv~r~ 95 (168)
T 3u2r_A 43 ELSAQQYNTLRLLRSVH--PEGMATLQIADRL--------ISRAPDIT----RLIDRLDDRGLVLRT 95 (168)
T ss_dssp TCCHHHHHHHHHHHHHT--TSCEEHHHHHHHC-----------CTHHH----HHHHHHHHTTSEEEE
T ss_pred CCCHHHHHHHHHHHhcC--CCCcCHHHHHHHH--------CCChhhHH----HHHHHHHHCCCEeec
Confidence 37888999999886521 1357777888875 88866666 79999999 799985
No 113
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=47.42 E-value=5.5 Score=33.71 Aligned_cols=28 Identities=25% Similarity=0.135 Sum_probs=21.5
Q ss_pred hcccccCcCCcCceeecc--------CC-CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNAS--------DK-VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~--------~~-~~aiKFh~ 117 (188)
.++.+||.|.+|.||.|. ++ .+|+|..+
T Consensus 44 ~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~ 80 (329)
T 4aoj_A 44 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK 80 (329)
T ss_dssp EEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEES
T ss_pred EEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEEC
Confidence 345789999999999993 12 68999754
No 114
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=46.93 E-value=10 Score=29.72 Aligned_cols=28 Identities=14% Similarity=0.038 Sum_probs=22.3
Q ss_pred hcccccCcCCcCceeeccCC-CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASDK-VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~-~~aiKFh~ 117 (188)
.++..||.|.+|.||.|... .+|+|..+
T Consensus 36 ~~~~~lg~G~~g~V~~~~~~~~~avk~~~ 64 (319)
T 2y4i_B 36 EIGELIGKGRFGQVYHGRWHGEVAIRLID 64 (319)
T ss_dssp ECCCBCCCSSSSEEEEEEESSSEEEEECC
T ss_pred EEeeEeccCCceEEEEEEEcCeEEEEEee
Confidence 45688999999999999443 78888764
No 115
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=46.92 E-value=8.2 Score=33.47 Aligned_cols=27 Identities=15% Similarity=-0.004 Sum_probs=15.7
Q ss_pred cccccCcCCcCceeecc----CCCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
+...||.|.+|.||.|. +..+|+|.-.
T Consensus 28 ~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~ 58 (350)
T 4b9d_A 28 RLQKIGEGSFGKAILVKSTEDGRQYVIKEIN 58 (350)
T ss_dssp EEEEC------CEEEEEETTTCCEEEEEEEE
T ss_pred EeEEEecCCCeEEEEEEECCCCCEEEEEEEe
Confidence 44779999999999993 3389999764
No 116
>2fxa_A Protease production regulatory protein HPR; protease porduction, regulation, STR genomics, PSI, protein structure initiative; HET: PGE P6G 1PE; 2.40A {Bacillus subtilis} SCOP: a.4.5.28
Probab=46.70 E-value=6.4 Score=30.95 Aligned_cols=50 Identities=14% Similarity=0.058 Sum_probs=39.2
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|+||..|... .=+....|++.. +++...+. +.+++|++ +||.|.
T Consensus 45 gLt~~q~~iL~~L~~~----~~~t~~eLa~~l--------~i~~stvs----~~l~~Le~~GlV~r~ 95 (207)
T 2fxa_A 45 DLNINEHHILWIAYQL----NGASISEIAKFG--------VMHVSTAF----NFSKKLEERGYLRFS 95 (207)
T ss_dssp TCCHHHHHHHHHHHHH----TSEEHHHHHHHT--------TCCHHHHH----HHHHHHHHHTSEEEE
T ss_pred CCCHHHHHHHHHHHHC----CCcCHHHHHHHH--------CCCHHHHH----HHHHHHHHCCCEEEe
Confidence 4788899999998652 347777888875 88866666 79999999 799885
No 117
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=46.10 E-value=10 Score=29.02 Aligned_cols=28 Identities=14% Similarity=0.162 Sum_probs=22.0
Q ss_pred cccccCcCCcCceeecc----CCCeeEEeeeh
Q 040944 91 QNSEAGRGSEPDRHNAS----DKVGAIIFCEY 118 (188)
Q Consensus 91 lG~~IGVGKESDVYea~----~~~~aiKFh~~ 118 (188)
++..||.|.+|.||.|. +..+|+|....
T Consensus 11 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~ 42 (276)
T 2yex_A 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDM 42 (276)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEEG
T ss_pred EEEEeecCCCcEEEEEEECCCCcEEEEEEeee
Confidence 45789999999999993 33889998653
No 118
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=45.80 E-value=12 Score=29.52 Aligned_cols=26 Identities=15% Similarity=0.213 Sum_probs=21.0
Q ss_pred ccccCcCCcCceeeccC----CCeeEEeee
Q 040944 92 NSEAGRGSEPDRHNASD----KVGAIIFCE 117 (188)
Q Consensus 92 G~~IGVGKESDVYea~~----~~~aiKFh~ 117 (188)
+..||.|.+|.||.|.+ ..+|+|..+
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~ 47 (316)
T 2ac3_A 18 EDVLGEGAHARVQTCINLITSQEYAVKIIE 47 (316)
T ss_dssp CCCCCCCSSEEEEEEECSSSCCEEEEEEEE
T ss_pred CceecCCceEEEEEEEEcCCCcEEEEEEEe
Confidence 46799999999999943 388999753
No 119
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=45.69 E-value=4.7 Score=34.43 Aligned_cols=27 Identities=15% Similarity=0.081 Sum_probs=21.1
Q ss_pred hcccccCcCCcCceeeccC-------CCeeEEee
Q 040944 90 QQNSEAGRGSEPDRHNASD-------KVGAIIFC 116 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~-------~~~aiKFh 116 (188)
.++..||.|.+|.||.|.+ ..+|+|.-
T Consensus 24 ~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i 57 (361)
T 4f9c_A 24 KIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHL 57 (361)
T ss_dssp EEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEE
T ss_pred EEEEEEecccCcEEEEEEEcccCCCCCEEEEEEE
Confidence 3567899999999999932 26899953
No 120
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=45.63 E-value=6.2 Score=30.65 Aligned_cols=26 Identities=15% Similarity=0.084 Sum_probs=21.0
Q ss_pred cccccCcCCcCceeecc--CCCeeEEee
Q 040944 91 QNSEAGRGSEPDRHNAS--DKVGAIIFC 116 (188)
Q Consensus 91 lG~~IGVGKESDVYea~--~~~~aiKFh 116 (188)
++..||.|.+|.||.|. +..+|+|.-
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~vavK~~ 39 (301)
T 3q4u_A 12 LLECVGKGRYGEVWRGSWQGENVAVKIF 39 (301)
T ss_dssp EEEEEEECSSEEEEEEEETTEEEEEEEE
T ss_pred EEEeeccCCCcEEEEEEECCEEEEEEEe
Confidence 45789999999999993 338999974
No 121
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=45.45 E-value=10 Score=31.60 Aligned_cols=27 Identities=30% Similarity=0.275 Sum_probs=16.9
Q ss_pred cccccCcCCcCceeecc------CCCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNAS------DKVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~------~~~~aiKFh~ 117 (188)
.|..||.|.+|.||.|. +..+|+|..+
T Consensus 25 ~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~ 57 (405)
T 3rgf_A 25 EGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIE 57 (405)
T ss_dssp SSCCCC-----EEEEEEESSSSCCCCEEEEECS
T ss_pred cCcEeeecCCeEEEEEEEccCCCCeEEEEEEEC
Confidence 47889999999999994 2278999754
No 122
>1okr_A MECI, methicillin resistance regulatory protein MECI; bacterial antibiotic resistance, MECI protein, transcriptional regulatory element; 2.4A {Staphylococcus aureus} SCOP: a.4.5.39 PDB: 1sax_A 1sd7_A 2d45_A 1sd6_A
Probab=45.24 E-value=5.3 Score=28.00 Aligned_cols=56 Identities=11% Similarity=0.114 Sum_probs=39.8
Q ss_pred hcccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 8 LRYLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 8 ~r~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
+..|+..+|.||..|.. +.-+....|++.. -.+.+++...+. +.|++|.+ +||.|.
T Consensus 5 ~~~lt~~~~~vL~~l~~----~~~~t~~ela~~l----~~~~~~s~~tv~----~~l~~L~~~Glv~r~ 61 (123)
T 1okr_A 5 TYEISSAEWEVMNIIWM----KKYASANNIIEEI----QMQKDWSPKTIR----TLITRLYKKGFIDRK 61 (123)
T ss_dssp CCCCCHHHHHHHHHHHH----HSSEEHHHHHHHH----HHHCCCCHHHHH----HHHHHHHHHTSEEEE
T ss_pred cccCCHHHHHHHHHHHh----CCCcCHHHHHHHH----hccCCCcHhhHH----HHHHHHHHCCCeEEE
Confidence 45688999999999975 2446777777764 112346645555 78999998 799884
No 123
>3r0a_A Putative transcriptional regulator; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.31A {Methanosarcina mazei}
Probab=45.15 E-value=9.1 Score=27.86 Aligned_cols=53 Identities=9% Similarity=0.168 Sum_probs=40.2
Q ss_pred cccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 9 RYLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 9 r~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
-.|++.+++||.++-..-. .|+....|++.. +++...+. +.|.+|.+ ++|.|.
T Consensus 22 ~gLt~~e~~il~~L~~~~~--~~~t~~eLa~~l--------~~s~sTV~----r~L~~L~~~GlV~r~ 75 (123)
T 3r0a_A 22 LNLTKADLNVMKSFLNEPD--RWIDTDALSKSL--------KLDVSTVQ----RSVKKLHEKEILQRS 75 (123)
T ss_dssp HTCCHHHHHHHHHHHHSTT--CCEEHHHHHHHH--------TSCHHHHH----HHHHHHHHTTSEEEE
T ss_pred cCCCHHHHHHHHHHHHCCC--CCcCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCCEEee
Confidence 4588999999999865322 248888898886 88844444 78889888 798874
No 124
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=45.07 E-value=7.3 Score=32.35 Aligned_cols=27 Identities=26% Similarity=0.006 Sum_probs=19.2
Q ss_pred cccccCcCCcCceeecc----CCCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
+...||.|.+|.||.|. +..+|+|.-+
T Consensus 9 ~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~ 39 (299)
T 4g31_A 9 PIQCLGRGGFGVVFEAKNKVDDCNYAIKRIR 39 (299)
T ss_dssp EEEEEEECC--EEEEEEETTTCCEEEEEEEE
T ss_pred EeeEEecCCCeEEEEEEECCCCCEEEEEEEe
Confidence 34679999999999993 2389999754
No 125
>3lwf_A LIN1550 protein, putative transcriptional regulator; structural genomics, JOI for structural genomics, JCSG; HET: SO4; 2.06A {Listeria innocua}
Probab=44.76 E-value=14 Score=28.79 Aligned_cols=75 Identities=8% Similarity=0.067 Sum_probs=48.2
Q ss_pred chhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccCCCccCCccceehhhhccc
Q 040944 15 DFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKDPALNSKKEGVSEENQQNS 93 (188)
Q Consensus 15 DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~~~~~~~YeGY~Lt~alG~ 93 (188)
-.|+|..+-.. ..-+.|+.+.|++.. ++|..-+. +.+.+|.+ +||... .++.-||+|.... .
T Consensus 29 Alr~L~~LA~~-~~~~~~s~~eIA~~~--------~i~~~~l~----kil~~L~~aGlv~s~---rG~~GGy~Lar~p-~ 91 (159)
T 3lwf_A 29 GLTITLELAKR-IGDGPISLRSIAQDK--------NLSEHYLE----QLIGPLRNAGIVKSI---RGAHGGYVLNGDP-E 91 (159)
T ss_dssp HHHHHHHHHHT-TTSCCBCHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEE---CSTTCEEEECSCT-T
T ss_pred HHHHHHHHHhc-CCCCCcCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCeEEEe---cCCCCceEecCCH-H
Confidence 34455544432 234589999999986 88844443 79999999 788864 4666799988322 2
Q ss_pred ccCcCCcCceeeccCC
Q 040944 94 EAGRGSEPDRHNASDK 109 (188)
Q Consensus 94 ~IGVGKESDVYea~~~ 109 (188)
.|-+ .||+.+..+
T Consensus 92 eItL---~dVi~avEg 104 (159)
T 3lwf_A 92 KITA---GDIIRTLEG 104 (159)
T ss_dssp TCBH---HHHHHHHSC
T ss_pred HCCH---HHHHHHHcC
Confidence 2322 477777554
No 126
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=44.63 E-value=6.6 Score=31.25 Aligned_cols=27 Identities=19% Similarity=0.096 Sum_probs=21.7
Q ss_pred cccccCcCCcCceeecc--CCCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNAS--DKVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~--~~~~aiKFh~ 117 (188)
++..||.|.+|.||.|. +..+|+|...
T Consensus 17 ~~~~lg~G~~g~Vy~~~~~~~~vavK~~~ 45 (336)
T 3g2f_A 17 LLELIGRGRYGAVYKGSLDERPVAVKVFS 45 (336)
T ss_dssp EEEEEEECSSEEEEEEEETTEEEEEEEEE
T ss_pred eeeecccCCCeEEEEEEECCeEEEEEEee
Confidence 45788999999999993 3389999864
No 127
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=44.40 E-value=7.4 Score=32.52 Aligned_cols=27 Identities=26% Similarity=0.084 Sum_probs=21.1
Q ss_pred cccccCcCCcCceeeccCC----CeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNASDK----VGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~~----~~aiKFh~ 117 (188)
++.+||.|.+|.||.|.+. .+|+|...
T Consensus 30 ~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~ 60 (290)
T 3fpq_A 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQ 60 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEE
T ss_pred eeeEEecCcCcEEEEEEECCCCeEEEEEEEc
Confidence 4567999999999999332 78888653
No 128
>1p6r_A Penicillinase repressor; transcription regulation, DNA-binding, winged helix protein, bacterial resistance to antibiotics; NMR {Bacillus licheniformis} SCOP: a.4.5.39 PDB: 2p7c_B
Probab=44.36 E-value=6.6 Score=26.15 Aligned_cols=56 Identities=9% Similarity=0.143 Sum_probs=39.1
Q ss_pred hcccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 8 LRYLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 8 ~r~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
+..|++.++.||..|-. ++-+....|.+.. . .+.+++...+. +.|++|.+ ++|.|.
T Consensus 4 ~~~lt~~e~~vL~~L~~----~~~~t~~ei~~~l--~--~~~~~s~~Tv~----~~l~rL~~kGlv~r~ 60 (82)
T 1p6r_A 4 IPQISDAELEVMKVIWK----HSSINTNEVIKEL--S--KTSTWSPKTIQ----TMLLRLIKKGALNHH 60 (82)
T ss_dssp CCCCCHHHHHHHHHHHT----SSSEEHHHHHHHH--H--HHSCCCHHHHH----HHHHHHHHTTSEEEE
T ss_pred cCCCCHHHHHHHHHHHc----CCCCCHHHHHHHH--h--hcCCccHHHHH----HHHHHHHHCCCeEEE
Confidence 45789999999999965 3457777777764 1 12345644444 78888888 798874
No 129
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=43.99 E-value=9 Score=30.47 Aligned_cols=28 Identities=14% Similarity=0.157 Sum_probs=22.4
Q ss_pred hcccccCcCCcCceeeccC----CCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD----KVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~----~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.+ ..+|+|..+
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~ 43 (319)
T 4euu_A 12 LLSDILGQGATANVFRGRHKKTGDLFAIKVFN 43 (319)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEC
T ss_pred EEEEEecCCCCeEEEEEEECCCCcEEEEEEec
Confidence 4567899999999999933 379999754
No 130
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=43.72 E-value=7.8 Score=31.07 Aligned_cols=27 Identities=19% Similarity=0.047 Sum_probs=21.5
Q ss_pred cccccCcCCcCceeeccC----CCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNASD----KVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~----~~~aiKFh~ 117 (188)
+...||.|.+|.||.|.+ ..+|+|...
T Consensus 35 i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~ 65 (286)
T 3uqc_A 35 LLIFHGGVPPLQFWQALDTALDRQVALTFVD 65 (286)
T ss_dssp EEEEEEBSTTCEEEEEEETTTTEEEEEEESC
T ss_pred EEEEEcccCCeEEEEEEecCCCceEEEEEEC
Confidence 457899999999999933 278999754
No 131
>1fx7_A Iron-dependent repressor IDER; DTXR, iron-dependent regulator, signaling protein; 2.00A {Mycobacterium tuberculosis} SCOP: a.4.5.24 a.76.1.1 b.34.1.2 PDB: 1u8r_A
Probab=43.34 E-value=8 Score=30.86 Aligned_cols=61 Identities=13% Similarity=0.047 Sum_probs=39.4
Q ss_pred cccCccchhHHHHHHhhccCCcccch--hhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccCCCccCCccce
Q 040944 9 RYLSKDDFKVLTAVETGMRNHEIVPF--RTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKDPALNSKKEGV 85 (188)
Q Consensus 9 r~L~~~DfRVL~AIE~GMRnhE~VP~--elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~~~~~~~YeGY 85 (188)
+.|++-.+.+|.+|-.-.. +-++. ..|++.. +++...+. +.+++|.+ +||.|. ++.++
T Consensus 2 ~~lt~~~e~~L~~L~~l~~--~~~~~~~~~La~~l--------~vs~~tvs----~~l~~Le~~GlV~r~-----~~~~v 62 (230)
T 1fx7_A 2 NELVDTTEMYLRTIYDLEE--EGVTPLRARIAERL--------DQSGPTVS----QTVSRMERDGLLRVA-----GDRHL 62 (230)
T ss_dssp CTTSSHHHHHHHHHHHHHH--HTSCCCHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEC-----TTSCE
T ss_pred CCCCHHHHHHHHHHHHHhh--cCCCCcHHHHHHHH--------CcCHHHHH----HHHHHHHHCCCEEEe-----CCccE
Confidence 3567777777777643221 12444 6677765 88866666 69999999 799985 23466
Q ss_pred ehh
Q 040944 86 SEE 88 (188)
Q Consensus 86 ~Lt 88 (188)
.||
T Consensus 63 ~LT 65 (230)
T 1fx7_A 63 ELT 65 (230)
T ss_dssp EEC
T ss_pred EEC
Confidence 666
No 132
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=43.25 E-value=6.5 Score=33.75 Aligned_cols=27 Identities=19% Similarity=0.191 Sum_probs=21.5
Q ss_pred hcccccCcCCcCceeeccC---------CCeeEEee
Q 040944 90 QQNSEAGRGSEPDRHNASD---------KVGAIIFC 116 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~---------~~~aiKFh 116 (188)
.++.+||.|.+|.||.|.. ..+|+|..
T Consensus 67 ~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l 102 (353)
T 4ase_A 67 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML 102 (353)
T ss_dssp EEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEE
T ss_pred EEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEE
Confidence 5678999999999999831 15888875
No 133
>2qq9_A Diphtheria toxin repressor; regulator, DTXR, helix-turn-helix, metal ION, ACT DNA-binding, ferrous iron, transcription; 1.71A {Corynebacterium diphtheriae} PDB: 2tdx_A 1ddn_A 1g3t_A 1g3s_A 1g3w_A 2qqa_A 2qqb_A 2dtr_A 1bi0_A 1bi2_A 1bi3_A 1dpr_A 1bi1_A 1fwz_A 1g3y_A 1c0w_A* 3glx_A 1p92_A 1xcv_A 1f5t_A ...
Probab=43.20 E-value=6.5 Score=31.47 Aligned_cols=60 Identities=12% Similarity=0.024 Sum_probs=39.6
Q ss_pred ccCccchhHHHHHHhhccCCcccch--hhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccCCCccCCcccee
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPF--RTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKDPALNSKKEGVS 86 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~--elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~~~~~~~YeGY~ 86 (188)
.|++-.+.+|.+|-.-... -++. ..|++.. +++.+.+. +.+++|.+ +||.|. +|.++.
T Consensus 3 ~lt~~~e~yL~~i~~l~~~--~~~~~~~~la~~l--------~vs~~tvs----~~l~~Le~~GlV~r~-----~~~~v~ 63 (226)
T 2qq9_A 3 DLVATTEMYLRTIYELEEE--GVTPLRARIAERL--------EQSGPTVS----QTVARMERDGLVVVA-----SDRSLQ 63 (226)
T ss_dssp CHHHHHHHHHHHHHHHHHH--TCCCBHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEC-----TTSBEE
T ss_pred CCCHHHHHHHHHHHHHhhc--CCCccHHHHHHHH--------CCCHHHHH----HHHHHHHHCCCEEEe-----CCCCeE
Confidence 4566667777776543221 2333 6777775 88866777 69999999 799984 345666
Q ss_pred hh
Q 040944 87 EE 88 (188)
Q Consensus 87 Lt 88 (188)
||
T Consensus 64 LT 65 (226)
T 2qq9_A 64 MT 65 (226)
T ss_dssp EC
T ss_pred EC
Confidence 76
No 134
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=43.16 E-value=6.8 Score=31.53 Aligned_cols=29 Identities=17% Similarity=0.099 Sum_probs=23.5
Q ss_pred hcccccCcCCcCceeeccC--CCeeEEeeeh
Q 040944 90 QQNSEAGRGSEPDRHNASD--KVGAIIFCEY 118 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~--~~~aiKFh~~ 118 (188)
.++..||.|.+|.||.|.+ ..+|+|....
T Consensus 23 ~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~ 53 (336)
T 2vuw_A 23 QRCEKIGEGVFGEVFQTIADHTPVAIKIIAI 53 (336)
T ss_dssp HTCEEEEEETTEEEEEEEETTEEEEEEEEEE
T ss_pred hheeeecccCceEEEEEEeCCceEEEEEEec
Confidence 4568899999999999933 3899998764
No 135
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=42.95 E-value=10 Score=29.11 Aligned_cols=28 Identities=11% Similarity=0.005 Sum_probs=22.3
Q ss_pred hcccccCcCCcCceeecc----CCCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
.++..||.|..|.||.|. +..+|+|...
T Consensus 14 ~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~ 45 (276)
T 2h6d_A 14 VLGDTLGVGTFGKVKIGEHQLTGHKVAVKILN 45 (276)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEE
T ss_pred EEEeeecCCCCeEEEEEEECCCCceEEEEEec
Confidence 356889999999999993 3389999764
No 136
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=42.85 E-value=8.2 Score=31.03 Aligned_cols=28 Identities=18% Similarity=-0.052 Sum_probs=22.4
Q ss_pred hcccccCcCCcCceeeccC--CCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD--KVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~--~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.. ..+|+|.-.
T Consensus 27 ~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~ 56 (322)
T 3soc_A 27 QLLEVKARGRFGCVWKAQLLNEYVAVKIFP 56 (322)
T ss_dssp EEEEEEECSTTCEEEEEEETTEEEEEEEEC
T ss_pred hhhheecccCceEEEEEEECCCEEEEEEee
Confidence 4567899999999999943 389999864
No 137
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=42.45 E-value=11 Score=30.50 Aligned_cols=28 Identities=18% Similarity=0.114 Sum_probs=22.3
Q ss_pred hcccccCcCCcCceeecc----CCCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|. +..+|+|+-+
T Consensus 14 ~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~ 45 (326)
T 2y0a_A 14 DTGEELGSGQFAVVKKCREKSTGLQYAAKFIK 45 (326)
T ss_dssp EEEEEEECCSSEEEEEEEETTTCCEEEEEEEE
T ss_pred EeceEEeeCCCeEEEEEEECCCCcEEEEEEEE
Confidence 456789999999999993 3378999764
No 138
>1p4x_A Staphylococcal accessory regulator A homologue; winged-helix protein, transcription; 2.20A {Staphylococcus aureus} SCOP: a.4.5.28 a.4.5.28
Probab=42.23 E-value=7.9 Score=32.02 Aligned_cols=52 Identities=21% Similarity=0.338 Sum_probs=39.2
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+..+|.||..|-..- -.-+....|++.. +++.+.+. +.+++|++ |||.|.
T Consensus 155 gLt~~q~~vL~~L~~~~--~~~~t~~eLa~~l--------~i~~~tvt----~~v~rLe~~GlV~R~ 207 (250)
T 1p4x_A 155 TLSFVEFTILAIITSQN--KNIVLLKDLIETI--------HHKYPQTV----RALNNLKKQGYLIKE 207 (250)
T ss_dssp SSCHHHHHHHHHHHTTT--TCCEEHHHHHHHS--------SSCHHHHH----HHHHHHHHHTSSEEE
T ss_pred CCCHHHHHHHHHHHhCC--CCCcCHHHHHHHH--------CCChhhHH----HHHHHHHHCCCEEee
Confidence 48889999999984321 1136677788875 88867777 79999999 799985
No 139
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=42.10 E-value=11 Score=29.49 Aligned_cols=29 Identities=17% Similarity=0.090 Sum_probs=22.6
Q ss_pred hcccccCcCCcCceeeccCC----CeeEEeeeh
Q 040944 90 QQNSEAGRGSEPDRHNASDK----VGAIIFCEY 118 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~----~~aiKFh~~ 118 (188)
.++..||.|.+|.||.|.+. .+|+|....
T Consensus 8 ~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~ 40 (305)
T 2wtk_C 8 LMGDLLGEGSYGKVKEVLDSETLCRRAVKILKK 40 (305)
T ss_dssp CCCCEEEECSSCEEEEEEBTTTCCEEEEEEECH
T ss_pred eEeeEEecCCCeEEEEEEECCCCcEEEEEEecc
Confidence 35688999999999999432 788887643
No 140
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=42.08 E-value=10 Score=30.22 Aligned_cols=28 Identities=18% Similarity=0.076 Sum_probs=22.5
Q ss_pred hcccccCcCCcCceeecc----CCCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|. +..+|+|+.+
T Consensus 15 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~ 46 (321)
T 2a2a_A 15 DIGEELGSGQFAIVKKCREKSTGLEYAAKFIK 46 (321)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEE
T ss_pred EEeeEeeecCCEEEEEEEECCCCeEEEEEEEe
Confidence 467889999999999993 2378999764
No 141
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=41.75 E-value=11 Score=31.88 Aligned_cols=28 Identities=14% Similarity=0.044 Sum_probs=21.2
Q ss_pred hcccccCcCCcCceeeccC-------CCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD-------KVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~-------~~~aiKFh~ 117 (188)
.+...||.|.+|.||.|.. ..+|+|.-+
T Consensus 27 ~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~ 61 (304)
T 3ubd_A 27 ELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLK 61 (304)
T ss_dssp EEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEE
T ss_pred EEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEe
Confidence 3567899999999999821 258998753
No 142
>1r7j_A Conserved hypothetical protein SSO10A; winged helix-turn-helix, two-stranded antiparallel coiled CO structural genomics, PSI; 1.47A {Sulfolobus solfataricus} SCOP: a.4.5.49 PDB: 1xsx_A
Probab=41.50 E-value=9.3 Score=27.20 Aligned_cols=49 Identities=12% Similarity=0.086 Sum_probs=35.1
Q ss_pred hhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccCCCccCCccceehh
Q 040944 16 FKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKDPALNSKKEGVSEE 88 (188)
Q Consensus 16 fRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~~~~~~~YeGY~Lt 88 (188)
+.||++|..| +....|+..+ |++...+. ..++.|.+ +||.+. . .||.+|
T Consensus 11 ~~IL~~i~~~------~~~t~La~~~--------~ls~~~~~----~~l~~L~~~GLI~~~---~---~~~~LT 60 (95)
T 1r7j_A 11 QAILEACKSG------SPKTRIMYGA--------NLSYALTG----RYIKMLMDLEIIRQE---G---KQYMLT 60 (95)
T ss_dssp HHHHHHHTTC------BCHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEE---T---TEEEEC
T ss_pred HHHHHHHHcC------CCHHHHHHHh--------CcCHHHHH----HHHHHHHHCCCeEEE---C---CeeEEC
Confidence 5688888532 6677777776 99855555 67888888 799985 2 368888
No 143
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=41.42 E-value=8.3 Score=31.82 Aligned_cols=28 Identities=11% Similarity=-0.013 Sum_probs=22.7
Q ss_pred hcccccCcCCcCceeeccC----CCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD----KVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~----~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.+ ..+|+|...
T Consensus 76 ~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~ 107 (377)
T 3byv_A 76 VRGTVLGQEDPYAYLEATDQETGESFEVHVPY 107 (377)
T ss_dssp EEEEEEEEETTEEEEEEEC-CCCCEEEEEEEE
T ss_pred EEcceeecCCCEEEEEEEECCCCcEEEEEEEe
Confidence 3468899999999999943 389999864
No 144
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=41.39 E-value=11 Score=30.67 Aligned_cols=28 Identities=11% Similarity=0.017 Sum_probs=22.0
Q ss_pred hcccccCcCCcCceeecc---------CCCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNAS---------DKVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~---------~~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|. +..+|+|..+
T Consensus 68 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~ 104 (365)
T 3e7e_A 68 YVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQK 104 (365)
T ss_dssp EEEEEEEECSSEEEEEEEC-------CCCCEEEEEES
T ss_pred EEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeC
Confidence 455789999999999992 2289999854
No 145
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=41.25 E-value=6 Score=31.01 Aligned_cols=28 Identities=14% Similarity=0.074 Sum_probs=21.7
Q ss_pred hcccccCcCCcCceeeccC----C-CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD----K-VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~----~-~~aiKFh~ 117 (188)
.+...||.|.+|.||.|.+ + .+|+|..+
T Consensus 17 ~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~ 49 (339)
T 1z57_A 17 EIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVK 49 (339)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTTEEEEEEEEC
T ss_pred EEEEEEecCCCeEEEEEEecCCCCcEEEEEEEe
Confidence 3557789999999999832 2 78999754
No 146
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=40.92 E-value=9.3 Score=29.74 Aligned_cols=28 Identities=25% Similarity=0.036 Sum_probs=17.1
Q ss_pred hcccccCcCCcCceeeccC----CCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD----KVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~----~~~aiKFh~ 117 (188)
.+...||.|.+|.||.|.+ ..+|+|...
T Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~ 45 (320)
T 2i6l_A 14 MDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIV 45 (320)
T ss_dssp EEEEECC-----CEEEEEETTTTEEEEEEEEE
T ss_pred eEEEEeccCCCeEEEEEEECCCCeEEEEEEEe
Confidence 4568899999999999933 278999653
No 147
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=40.86 E-value=10 Score=29.24 Aligned_cols=27 Identities=22% Similarity=0.118 Sum_probs=21.5
Q ss_pred cccccCcCCcCceeecc----CCCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
++..||.|.+|.||.|. +..+|+|...
T Consensus 15 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~ 45 (278)
T 3cok_A 15 VGNLLGKGSFAGVYRAESIHTGLEVAIKMID 45 (278)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEE
T ss_pred eeeeecCCCceEEEEEEEccCCceEEEEEee
Confidence 45788999999999993 2278999764
No 148
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=40.82 E-value=7.1 Score=30.51 Aligned_cols=28 Identities=14% Similarity=0.083 Sum_probs=22.1
Q ss_pred hcccccCcCCcCceeeccC---------CCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD---------KVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~---------~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.+ ..+|+|...
T Consensus 26 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~ 62 (314)
T 2ivs_A 26 VLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK 62 (314)
T ss_dssp EEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECC
T ss_pred eeeeeecccCCeeEEEEEEeccCcccCcceEEEEecc
Confidence 4567899999999999943 368888764
No 149
>2oqg_A Possible transcriptional regulator, ARSR family P; winged-helix-turn-helix, structural genomics, PSI-2, protein structure initiative; 1.54A {Rhodococcus SP}
Probab=40.78 E-value=8.8 Score=26.45 Aligned_cols=53 Identities=13% Similarity=0.180 Sum_probs=36.7
Q ss_pred HHhcccC-ccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 6 DVLRYLS-KDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 6 e~~r~L~-~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
..++.|. +-.++||..+..| -+....|++.. |++.+.+. +.|.+|.+ ++|.+.
T Consensus 13 ~~~~~l~~~~r~~IL~~L~~~-----~~~~~ela~~l--------~is~~tv~----~~l~~L~~~gli~~~ 67 (114)
T 2oqg_A 13 SVFAALSDETRWEILTELGRA-----DQSASSLATRL--------PVSRQAIA----KHLNALQACGLVESV 67 (114)
T ss_dssp HHHHHTTCHHHHHHHHHHHHS-----CBCHHHHHHHS--------SSCHHHHH----HHHHHHHHTTSEEEE
T ss_pred HHHHHhCChHHHHHHHHHHcC-----CCCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCCeeEE
Confidence 3455554 4567899988433 26777788876 88855555 78888888 788874
No 150
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=40.63 E-value=13 Score=30.39 Aligned_cols=28 Identities=21% Similarity=0.124 Sum_probs=21.9
Q ss_pred hcccccCcCCcCceeeccC---C-CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD---K-VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~---~-~~aiKFh~ 117 (188)
.+...||.|.+|.||.|.+ + .+|+|.-.
T Consensus 27 ~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~ 58 (335)
T 3dls_A 27 STMSPLGSGAFGFVWTAVDKEKNKEVVVKFIK 58 (335)
T ss_dssp EEEEECSSSSSCSEEEEEETTTTEEEEEEEEE
T ss_pred EEEeEEEecCCEEEEEEEECCCCcEEEEEEEe
Confidence 3557899999999999932 2 78999654
No 151
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=40.57 E-value=9.8 Score=31.96 Aligned_cols=28 Identities=18% Similarity=0.076 Sum_probs=22.5
Q ss_pred hcccccCcCCcCceeecc----CCCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|. +..+|+|+.+
T Consensus 15 ~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~ 46 (361)
T 2yab_A 15 DIGEELGSGQFAIVKKCREKSTGLEYAAKFIK 46 (361)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEE
T ss_pred EEeeEEeeCcCEEEEEEEECCCCCEEEEEEEE
Confidence 456889999999999993 3378999765
No 152
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=40.53 E-value=6.9 Score=29.68 Aligned_cols=28 Identities=0% Similarity=-0.175 Sum_probs=22.1
Q ss_pred cccccCcCCcCceeeccCC--CeeEEeeeh
Q 040944 91 QNSEAGRGSEPDRHNASDK--VGAIIFCEY 118 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~~--~~aiKFh~~ 118 (188)
++..||.|.+|.||.|.+. .+|+|.-+.
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~avK~~~~ 43 (271)
T 3kmu_A 14 FLTKLNENHSGELWKGRWQGNDIVVKVLKV 43 (271)
T ss_dssp EEEEEEEETTEEEEEEEETTEEEEEEEECC
T ss_pred HHHHhcCCCcceEEEEEECCeeEEEEEecc
Confidence 4578899999999999433 889998654
No 153
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=40.40 E-value=14 Score=29.26 Aligned_cols=28 Identities=14% Similarity=0.172 Sum_probs=21.9
Q ss_pred hcccccCcCCcCceeeccC----CCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD----KVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~----~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.. ..+|+|...
T Consensus 27 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~ 58 (326)
T 2x7f_A 27 ELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD 58 (326)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEE
T ss_pred EEEEEeccCCCEEEEEEEECCCCCeEEEEEEe
Confidence 3567899999999999932 278999754
No 154
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=40.23 E-value=9.1 Score=31.76 Aligned_cols=28 Identities=18% Similarity=0.321 Sum_probs=22.7
Q ss_pred hcccccCcCCcCceeecc----CCCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|. +..+|+|..+
T Consensus 117 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~ 148 (377)
T 3cbl_A 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSCR 148 (377)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEECC
T ss_pred EEeeEeccCCCCeEEEEEEecCCeEEEEEEcc
Confidence 567889999999999993 2279999754
No 155
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=39.87 E-value=11 Score=30.58 Aligned_cols=35 Identities=11% Similarity=0.041 Sum_probs=25.3
Q ss_pred ccceehhhhcccccCcCCcCceeeccC----CCeeEEeee
Q 040944 82 KEGVSEENQQNSEAGRGSEPDRHNASD----KVGAIIFCE 117 (188)
Q Consensus 82 YeGY~Lt~alG~~IGVGKESDVYea~~----~~~aiKFh~ 117 (188)
|..|.+.. .|..||.|.+|.||.|.+ ..+|+|...
T Consensus 7 ~~~y~~~~-~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~ 45 (325)
T 3kn6_A 7 YQHYDLDL-KDKPLGEGSFSICRKCVHKKSNQAFAVKIIS 45 (325)
T ss_dssp HHHEEECT-TSCCSEEETTEEEEEEEETTTCCEEEEEEEE
T ss_pred hhcccccc-CCCccccCCCeEEEEEEECCCCCEEEEEEEC
Confidence 45555542 267899999999999933 378999754
No 156
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=39.81 E-value=8.7 Score=30.26 Aligned_cols=28 Identities=14% Similarity=0.014 Sum_probs=22.2
Q ss_pred hcccccCcCCcCceeeccC----CCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD----KVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~----~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.+ ..+|+|...
T Consensus 34 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~ 65 (312)
T 2iwi_A 34 RLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIP 65 (312)
T ss_dssp EEEEEEEEETTEEEEEEECTTTCCEEEEEECC
T ss_pred EEeeEEEcCCCEEEEEEEEccCCeEEEEEEEe
Confidence 4567899999999999933 278999753
No 157
>1ku9_A Hypothetical protein MJ223; putative transcription factor, homodimeric winged-helix fold, structural genomics, PSI; 2.80A {Methanocaldococcus jannaschii} SCOP: a.4.5.36
Probab=39.78 E-value=13 Score=25.92 Aligned_cols=51 Identities=12% Similarity=0.055 Sum_probs=38.8
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.++..++++|..+... + .-+....|++.. |++.+.+. +.+++|.+ ++|.|.
T Consensus 23 gl~~~~~~il~~L~~~--~-~~~t~~ela~~l--------~~~~stvs----~~l~~L~~~G~v~r~ 74 (152)
T 1ku9_A 23 GLNKSVGAVYAILYLS--D-KPLTISDIMEEL--------KISKGNVS----MSLKKLEELGFVRKV 74 (152)
T ss_dssp TCCHHHHHHHHHHHHC--S-SCEEHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEE
T ss_pred CCChhHHHHHHHHHHc--C-CCCCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCCEEEE
Confidence 4778889999998432 2 347888888886 99866666 78999988 799884
No 158
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=39.50 E-value=17 Score=28.15 Aligned_cols=26 Identities=23% Similarity=0.109 Sum_probs=20.8
Q ss_pred cccccCcCCcCceeeccC----CCeeEEee
Q 040944 91 QNSEAGRGSEPDRHNASD----KVGAIIFC 116 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~----~~~aiKFh 116 (188)
+...||.|.+|.||.|.+ ..+|+|..
T Consensus 23 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~ 52 (287)
T 4f0f_A 23 YEKQIGKGGFGLVHKGRLVKDKSVVAIKSL 52 (287)
T ss_dssp EEEECCCCSSSCEEEEEETTTCCEEEEEEC
T ss_pred ehhccccCCceeEEEEEEcCCceEEEEEEe
Confidence 457799999999999933 37899964
No 159
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=39.47 E-value=8.1 Score=31.23 Aligned_cols=27 Identities=19% Similarity=-0.054 Sum_probs=21.4
Q ss_pred hcccccCcCCcCceeeccCC---CeeEEee
Q 040944 90 QQNSEAGRGSEPDRHNASDK---VGAIIFC 116 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~---~~aiKFh 116 (188)
.++..||.|.+|.||.|.+. .+|+|..
T Consensus 25 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~ 54 (362)
T 3pg1_A 25 TVQRFISSGSYGAVCAGVDSEGIPVAIKRV 54 (362)
T ss_dssp EEEEEEEEETTEEEEEEECTTSCEEEEEEE
T ss_pred EEeEEeccCCCEEEEEEECCCCCeEEEEec
Confidence 35678999999999999433 7899954
No 160
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=39.28 E-value=10 Score=31.35 Aligned_cols=27 Identities=22% Similarity=-0.008 Sum_probs=20.3
Q ss_pred hcccccCcCCcCceeeccC----CCeeEEee
Q 040944 90 QQNSEAGRGSEPDRHNASD----KVGAIIFC 116 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~----~~~aiKFh 116 (188)
.++..||.|.+|.||.|.+ ..+|+|.-
T Consensus 10 ~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~ 40 (383)
T 3eb0_A 10 SLGKTLGTGSFGIVCEVFDIESGKRFALKKV 40 (383)
T ss_dssp EEEEEEECC-CEEEEEEEETTTCCEEEEEEE
T ss_pred EEEEEEEeccCEEEEEEEECCCCCEEEEEEE
Confidence 3567899999999999932 38899953
No 161
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=39.19 E-value=14 Score=29.95 Aligned_cols=27 Identities=15% Similarity=0.249 Sum_probs=21.7
Q ss_pred cccccCcCCcCceeeccCC---CeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNASDK---VGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~~---~~aiKFh~ 117 (188)
+...||.|.+|.||.|.+. .+|+|...
T Consensus 13 i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~ 42 (343)
T 3dbq_A 13 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVN 42 (343)
T ss_dssp EEEEESCCSSEEEEEEECTTSCEEEEEEEE
T ss_pred EEEEEecCCCeEEEEEEeCCCCEEEEEEee
Confidence 5578999999999999443 68999764
No 162
>3lax_A Phenylacetate-coenzyme A ligase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 1.43A {Bacteroides vulgatus}
Probab=39.17 E-value=41 Score=23.18 Aligned_cols=35 Identities=14% Similarity=0.265 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCccccccccccccCCCCCCCC
Q 040944 144 ELVKQIEKQRRRAVAAVGDESLLPQEIPARLRVANPPTIPKS 185 (188)
Q Consensus 144 ~l~k~l~kqr~~a~aaa~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (188)
+....|.++-+.++++.+| +|+++.+-.|-++|+|
T Consensus 61 ~~~~~l~~~i~~~l~~~~g-------v~~~v~~v~~~~lPrt 95 (109)
T 3lax_A 61 GRLQALTREITRQLKDEIL-------VTPRVKLVPKGALPKS 95 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHS-------SCCEEEEECTTCSCCC
T ss_pred chhhhhHHHHHHHHHHHhC-------CccceEEEcCCeecCC
Confidence 3344455555667777766 3445666666788886
No 163
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=38.97 E-value=12 Score=29.46 Aligned_cols=27 Identities=11% Similarity=0.057 Sum_probs=21.4
Q ss_pred hcccccCcCCcCceeeccC----CCeeEEee
Q 040944 90 QQNSEAGRGSEPDRHNASD----KVGAIIFC 116 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~----~~~aiKFh 116 (188)
.++..||.|.+|.||.|.+ ..+|+|..
T Consensus 13 ~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~ 43 (310)
T 3s95_A 13 IHGEVLGKGCFGQAIKVTHRETGEVMVMKEL 43 (310)
T ss_dssp EEEEEEECCSSEEEEEEEETTTCCEEEEEEE
T ss_pred eccceecCCCCEEEEEEEECCCCcEEEEEEe
Confidence 4578899999999999942 37888854
No 164
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=38.73 E-value=9.3 Score=30.38 Aligned_cols=28 Identities=21% Similarity=0.125 Sum_probs=22.2
Q ss_pred hcccccCcCCcCceeeccCC----CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASDK----VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~----~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.+. .+|+|...
T Consensus 15 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~ 46 (311)
T 3ork_A 15 ELGEILGFGGMSEVHLARDLRDHRDVAVKVLR 46 (311)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEC
T ss_pred EEEEEEccCCCEEEEEEEECCCCceEEEEEeC
Confidence 35678999999999999432 88999764
No 165
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=38.56 E-value=11 Score=34.35 Aligned_cols=28 Identities=21% Similarity=0.150 Sum_probs=22.6
Q ss_pred hcccccCcCCcCceeecc----CCCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|. +..+|+|+..
T Consensus 160 ~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~ 191 (573)
T 3uto_A 160 DIHEELGTGAFGVVHRVTERATGNNFAAKFVM 191 (573)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEE
T ss_pred EEEEEEeeccCeEEEEEEECCCCCEEEEEEEe
Confidence 467889999999999993 3388999754
No 166
>2kko_A Possible transcriptional regulatory protein (possibly ARSR-family); NESG, DNA-binding, transcription regulation, WHTH, homodimer; NMR {Mycobacterium bovis} PDB: 3gw2_A
Probab=38.34 E-value=11 Score=26.68 Aligned_cols=64 Identities=11% Similarity=0.149 Sum_probs=42.4
Q ss_pred HHhcccC-ccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccCCCccCCcc
Q 040944 6 DVLRYLS-KDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKDPALNSKKE 83 (188)
Q Consensus 6 e~~r~L~-~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~~~~~~~Ye 83 (188)
..++.|. +-.++||..+.. .-+....|++.. |++...+. +.|++|.. +||.+.. .+.+.
T Consensus 17 ~~~~al~~~~r~~IL~~L~~-----~~~s~~eLa~~l--------gis~stvs----~~L~~L~~~GlV~~~~--~gr~~ 77 (108)
T 2kko_A 17 RVGKALANGRRLQILDLLAQ-----GERAVEAIATAT--------GMNLTTAS----ANLQALKSGGLVEARR--EGTRQ 77 (108)
T ss_dssp HHHHHHTTSTTHHHHHHHTT-----CCEEHHHHHHHH--------TCCHHHHH----HHHHHHHHHTSEEEEE--ETTEE
T ss_pred HHHHHhCCHHHHHHHHHHHc-----CCcCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCCeEEEE--eCCEE
Confidence 4455554 446788888753 335777788876 99855555 68888888 7887641 34455
Q ss_pred ceehh
Q 040944 84 GVSEE 88 (188)
Q Consensus 84 GY~Lt 88 (188)
.|+++
T Consensus 78 ~y~l~ 82 (108)
T 2kko_A 78 YYRIA 82 (108)
T ss_dssp EEEES
T ss_pred EEEEC
Confidence 67766
No 167
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=38.30 E-value=13 Score=28.63 Aligned_cols=26 Identities=19% Similarity=0.046 Sum_probs=12.2
Q ss_pred cccccCcCCcCceeeccC----CCeeEEee
Q 040944 91 QNSEAGRGSEPDRHNASD----KVGAIIFC 116 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~----~~~aiKFh 116 (188)
+...||.|..|.||.|.+ ..+|+|..
T Consensus 17 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~ 46 (275)
T 2eue_A 17 IVKTLGEGSFAKVKLAYHTTTGQKVALKII 46 (275)
T ss_dssp CCC---------EEEEECTTTCCEEEEEEE
T ss_pred EEEEEEcCCCEEEEEEEECCCCCEEEEEEE
Confidence 457799999999999932 38899974
No 168
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=38.19 E-value=7.9 Score=29.67 Aligned_cols=27 Identities=15% Similarity=-0.055 Sum_probs=21.0
Q ss_pred cccccCcCCcCceeecc--CCCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNAS--DKVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~--~~~~aiKFh~ 117 (188)
++..||.|.+|.||.|. +..+|+|...
T Consensus 11 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~ 39 (271)
T 3dtc_A 11 LEEIIGIGGFGKVYRAFWIGDEVAVKAAR 39 (271)
T ss_dssp EEEEEEEETTEEEEEEEETTEEEEEEEC-
T ss_pred eeeeeccCCCeEEEEEEEcCCeEEEEEEe
Confidence 45789999999999993 3388998754
No 169
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=38.11 E-value=17 Score=28.95 Aligned_cols=27 Identities=11% Similarity=-0.086 Sum_probs=21.3
Q ss_pred hcccccCcCCcCceeecc---CCCeeEEee
Q 040944 90 QQNSEAGRGSEPDRHNAS---DKVGAIIFC 116 (188)
Q Consensus 90 alG~~IGVGKESDVYea~---~~~~aiKFh 116 (188)
.++..||.|.+|.||.|. +..+|+|..
T Consensus 42 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~ 71 (321)
T 2qkw_B 42 DHKFLIGHGVFGKVYKGVLRDGAKVALKRR 71 (321)
T ss_dssp SCCCCSCBCSSSEEEEEECTTCCEEEEEEC
T ss_pred CccceeecCCCeeEEEEEECCCCEEEEEEe
Confidence 456789999999999994 338888853
No 170
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=38.02 E-value=9.7 Score=29.35 Aligned_cols=27 Identities=19% Similarity=0.083 Sum_probs=21.3
Q ss_pred cccccCcCCcCceeeccC---C-CeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNASD---K-VGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~---~-~~aiKFh~ 117 (188)
+...||.|.+|.||.|.+ + .+|+|...
T Consensus 11 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~ 41 (290)
T 3fme_A 11 PIMELGRGAYGVVEKMRHVPSGQIMAVKRIR 41 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEC
T ss_pred hHHhcCCCCCeEEEEEEecCCCeEEEEEEee
Confidence 457799999999999943 2 78999654
No 171
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=37.91 E-value=12 Score=30.09 Aligned_cols=28 Identities=18% Similarity=0.208 Sum_probs=22.2
Q ss_pred hcccccCcCCcCceeecc-----C----CCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNAS-----D----KVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~-----~----~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|. . ..+|+|..+
T Consensus 25 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~ 61 (359)
T 3vhe_A 25 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK 61 (359)
T ss_dssp EEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEEC
T ss_pred eeceeecCCCCceEEEEEeccccccccceEEEEEEec
Confidence 467889999999999994 2 278999763
No 172
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=37.89 E-value=13 Score=28.79 Aligned_cols=28 Identities=18% Similarity=0.038 Sum_probs=18.9
Q ss_pred hcccccCcCCcCceeeccC----CCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD----KVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~----~~~aiKFh~ 117 (188)
.++..||.|..|.||.|.+ ..+|+|...
T Consensus 18 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~ 49 (303)
T 2vwi_A 18 ELQEVIGSGATAVVQAAYCAPKKEKVAIKRIN 49 (303)
T ss_dssp EEEEECC---CCCEEEEEC----CEEEEECCC
T ss_pred hhhheeccccceEEEEEEECCCCcEEEEEEEE
Confidence 3567899999999999943 378998653
No 173
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=37.87 E-value=11 Score=29.25 Aligned_cols=28 Identities=25% Similarity=0.243 Sum_probs=21.6
Q ss_pred hcccccCcCCcCceeeccCC-------CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASDK-------VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~-------~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.+. .+|+|..+
T Consensus 18 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~ 52 (281)
T 1mp8_A 18 ELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK 52 (281)
T ss_dssp EEEEEEEECSSSEEEEEEECCC--CCEEEEEEECT
T ss_pred EEEeEeeecCCeeEEEEEEecCCCCceEEEEEecc
Confidence 46788999999999999331 48888754
No 174
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=37.79 E-value=11 Score=29.96 Aligned_cols=29 Identities=21% Similarity=0.188 Sum_probs=22.6
Q ss_pred hhcccccCcCCcCceeeccCC----CeeEEeee
Q 040944 89 NQQNSEAGRGSEPDRHNASDK----VGAIIFCE 117 (188)
Q Consensus 89 ~alG~~IGVGKESDVYea~~~----~~aiKFh~ 117 (188)
-.++..||.|.+|.||.|.+. .+|+|...
T Consensus 28 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~ 60 (345)
T 3hko_A 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMN 60 (345)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEE
T ss_pred eeecceeeecCCeEEEEEEECCCCceEEEeehh
Confidence 356688999999999999332 78999754
No 175
>1opo_A Coat protein; plant virus, carmovirus, virus/viral protein, X-RAY diffraction, tomato bushy stunt virus, icosahedral virus; 3.20A {Carnation mottle virus} SCOP: b.121.4.7
Probab=37.78 E-value=6.9 Score=35.06 Aligned_cols=35 Identities=20% Similarity=0.341 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhCCCCCccc-cccccccccCCCC
Q 040944 147 KQIEKQRRRAVAAVGDESLLPQ-EIPARLRVANPPT 181 (188)
Q Consensus 147 k~l~kqr~~a~aaa~~~~~~~~-~~~~~~~~~~~~~ 181 (188)
++|+|+.|||-.+|.|-+.-|. .+|.+.|+.||+.
T Consensus 34 ~sLs~~Qk~~ar~~~g~~~~p~~~v~~~~R~~~p~~ 69 (348)
T 1opo_A 34 ASLSTNQKRRAEMLAGYTPAILAFTPRRPRMTNPPP 69 (348)
T ss_dssp ------------------------------------
T ss_pred hhcCHHHHHHHHHhcCCCCCCeeeccceeeccCCCC
Confidence 5789999999899988887774 4466779999864
No 176
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=37.76 E-value=9.8 Score=30.71 Aligned_cols=28 Identities=18% Similarity=0.067 Sum_probs=22.3
Q ss_pred hcccccCcCCcCceeeccC---C-CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD---K-VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~---~-~~aiKFh~ 117 (188)
.+...||.|.+|.||.|.+ + .+|+|..+
T Consensus 40 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~ 71 (397)
T 1wak_A 40 HVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVK 71 (397)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEC
T ss_pred EEEEEeeecCCeeEEEEEecCCCeEEEEEEEe
Confidence 4557899999999999932 2 79999864
No 177
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=37.74 E-value=9.2 Score=29.61 Aligned_cols=27 Identities=19% Similarity=0.154 Sum_probs=21.3
Q ss_pred hcccccCcCCcCceeeccCC----CeeEEee
Q 040944 90 QQNSEAGRGSEPDRHNASDK----VGAIIFC 116 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~----~~aiKFh 116 (188)
.++..||.|.+|.||.|.+. .+|+|..
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~ 42 (279)
T 3fdn_A 12 EIGRPLGKGKFGNVYLAREKQSKFILALKVL 42 (279)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEE
T ss_pred EEeeEEecCCCeEEEEEEEccCCcEEEEEEE
Confidence 35678999999999999332 6899975
No 178
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=37.61 E-value=12 Score=30.00 Aligned_cols=26 Identities=19% Similarity=0.068 Sum_probs=11.1
Q ss_pred cccccCcCCcCceeeccC----CCeeEEee
Q 040944 91 QNSEAGRGSEPDRHNASD----KVGAIIFC 116 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~----~~~aiKFh 116 (188)
++..||.|.+|.||.|.+ ..+|+|..
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~ 56 (360)
T 3e3p_A 27 VERMAGQGTFGTVQLGKEKSTGMSVAIKKV 56 (360)
T ss_dssp EC----------CEEEEETTTCCEEEEEEE
T ss_pred EEEEEecCCCeEEEEEEECCCCCEEEEEEE
Confidence 457899999999999932 37899953
No 179
>2v79_A DNA replication protein DNAD; primosome, DNA-binding protein; HET: DNA; 2.00A {Bacillus subtilis}
Probab=37.58 E-value=12 Score=28.49 Aligned_cols=52 Identities=8% Similarity=0.098 Sum_probs=40.4
Q ss_pred cCccchhHHHHHHhhc-cCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-ccccc
Q 040944 11 LSKDDFKVLTAVETGM-RNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHK 74 (188)
Q Consensus 11 L~~~DfRVL~AIE~GM-RnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R 74 (188)
|+..+|-+|--|..-. ....+...+.|++.. |+++.++. +.|.+|.+ +||.+
T Consensus 30 Ls~~E~~lLl~L~~~~~~g~~~ps~~~LA~~~--------~~s~~~v~----~~L~~L~~KGlI~i 83 (135)
T 2v79_A 30 LNETELILLLKIKMHLEKGSYFPTPNQLQEGM--------SISVEECT----NRLRMFIQKGFLFI 83 (135)
T ss_dssp CCHHHHHHHHHHHHHHTTTCCSCCHHHHHTTS--------SSCHHHHH----HHHHHHHHHTSCEE
T ss_pred CCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCCEEE
Confidence 7888999887776643 445788889999986 99977777 58888887 78777
No 180
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=37.34 E-value=11 Score=31.41 Aligned_cols=28 Identities=21% Similarity=0.143 Sum_probs=22.2
Q ss_pred hcccccCcCCcCceeeccC----CCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD----KVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~----~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.+ ..+|+|+..
T Consensus 12 ~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~ 43 (336)
T 3h4j_B 12 IIRETLGEGSFGKVKLATHYKTQQKVALKFIS 43 (336)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEE
T ss_pred EEEEEEecCCCeEEEEEEECCCCCEEEEEEEe
Confidence 3567899999999999942 289999754
No 181
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=37.27 E-value=10 Score=31.09 Aligned_cols=29 Identities=10% Similarity=-0.117 Sum_probs=23.4
Q ss_pred hcccccCcCCcCceeeccC---C-CeeEEeeeh
Q 040944 90 QQNSEAGRGSEPDRHNASD---K-VGAIIFCEY 118 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~---~-~~aiKFh~~ 118 (188)
.++..||.|.+|.||.|.+ + .+|+|....
T Consensus 65 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~ 97 (371)
T 3q60_A 65 KLVEPLRVGDRSVVFLVRDVERLEDFALKVFTM 97 (371)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEEC
T ss_pred eeeeeccCCCCEEEEEEEECCCCceeEEEEEEe
Confidence 3668899999999999942 2 799998765
No 182
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=37.24 E-value=16 Score=28.63 Aligned_cols=27 Identities=26% Similarity=0.284 Sum_probs=21.5
Q ss_pred cccccCcCCcCceeecc----CCCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
++..||.|..|.||.|. +..+|+|...
T Consensus 26 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~ 56 (303)
T 3a7i_A 26 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIID 56 (303)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEE
T ss_pred HhhhhcccCCeEEEEEEECCCCcEEEEEEec
Confidence 45789999999999993 2378999764
No 183
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=37.11 E-value=16 Score=28.53 Aligned_cols=27 Identities=15% Similarity=0.182 Sum_probs=21.3
Q ss_pred cccccCcCCcCceeeccC----CCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNASD----KVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~----~~~aiKFh~ 117 (188)
+...||.|.+|.||.|.+ ..+|+|...
T Consensus 6 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~ 36 (292)
T 3o0g_A 6 KLEKIGEGTYGTVFKAKNRETHEIVALKRVR 36 (292)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEE
T ss_pred eeeEecCCCCeEEEEEEECCCCceEEEEeee
Confidence 457899999999999933 278999764
No 184
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=37.07 E-value=9.4 Score=30.70 Aligned_cols=28 Identities=18% Similarity=0.039 Sum_probs=22.3
Q ss_pred hcccccCcCCcCceeeccC---C-CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD---K-VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~---~-~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.+ + .+|+|...
T Consensus 22 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~ 53 (373)
T 1q8y_A 22 ILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVR 53 (373)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEC
T ss_pred EEEEeeeecCCeEEEEEEecCCCcEEEEEEec
Confidence 4567899999999999943 2 89999754
No 185
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=37.01 E-value=12 Score=29.00 Aligned_cols=28 Identities=14% Similarity=0.025 Sum_probs=22.0
Q ss_pred hcccccCcCCcCceeeccC--CCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD--KVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~--~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.. ..+|+|..+
T Consensus 24 ~~~~~lg~G~~g~V~~~~~~~~~vavK~~~ 53 (278)
T 1byg_A 24 KLLQTIGKGEFGDVMLGDYRGNKVAVKCIK 53 (278)
T ss_dssp EEEEEEEECSSCEEEEEEETTEEEEEEECC
T ss_pred eEEeEEecCCCceEEEEEEcCCEEEEEEec
Confidence 4567899999999999933 388998754
No 186
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=36.84 E-value=14 Score=28.36 Aligned_cols=27 Identities=22% Similarity=0.144 Sum_probs=21.6
Q ss_pred cccccCcCCcCceeecc----CCCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
++..||.|.+|.||.|. +..+|+|.-+
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~ 39 (283)
T 3bhy_A 9 MGEELGSGQFAIVRKCRQKGTGKEYAAKFIK 39 (283)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEE
T ss_pred hHHhhcccCceEEEEEEEcCCCCeeehHHhh
Confidence 56789999999999993 3388999754
No 187
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=36.77 E-value=14 Score=30.94 Aligned_cols=27 Identities=19% Similarity=0.163 Sum_probs=21.8
Q ss_pred hcccccCcCCcCceeecc----CCCeeEEee
Q 040944 90 QQNSEAGRGSEPDRHNAS----DKVGAIIFC 116 (188)
Q Consensus 90 alG~~IGVGKESDVYea~----~~~~aiKFh 116 (188)
.++..||.|.+|.||.|. +..+|+|..
T Consensus 13 ~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~ 43 (347)
T 3zgw_A 13 ELHETIGTGGFAKVKLACHILTGEMVAIKIM 43 (347)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEE
T ss_pred EEEEEEEcCCCeEEEEEEECCCCCEEEEEEE
Confidence 456789999999999993 238999974
No 188
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=36.39 E-value=9.3 Score=33.82 Aligned_cols=28 Identities=14% Similarity=0.013 Sum_probs=22.2
Q ss_pred hcccccCcCCcCceeeccCC---CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASDK---VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~---~~aiKFh~ 117 (188)
.++..||.|.+|.||.|... .+|+|..+
T Consensus 270 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~ 300 (535)
T 2h8h_A 270 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK 300 (535)
T ss_dssp EEEEEEEECSSEEEEEEEETTTEEEEEEEEC
T ss_pred hhheecccCCCeEEEEEEECCCceEEEEEeC
Confidence 45678999999999999433 68999765
No 189
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=36.37 E-value=16 Score=29.31 Aligned_cols=27 Identities=15% Similarity=0.052 Sum_probs=13.1
Q ss_pred cccccCcCCcCceeeccC----CCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNASD----KVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~----~~~aiKFh~ 117 (188)
+...||.|.+|.||.|.+ ..+|+|..+
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~ 39 (317)
T 2pmi_A 9 QLEKLGNGTYATVYKGLNKTTGVYVALKEVK 39 (317)
T ss_dssp ----------CEEEEEECSSSCCEEEEEEEE
T ss_pred EeeEECCCCCEEEEEEEECCCCcEEEEEEee
Confidence 457899999999999933 278999764
No 190
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=36.37 E-value=19 Score=28.47 Aligned_cols=28 Identities=14% Similarity=0.043 Sum_probs=21.8
Q ss_pred hcccccCcCCcCceeeccC---CCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD---KVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~---~~~aiKFh~ 117 (188)
.+...||.|.+|.||.|.. ..+|+|...
T Consensus 33 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~ 63 (326)
T 3uim_A 33 SNKNILGRGGFGKVYKGRLADGTLVAVKRLK 63 (326)
T ss_dssp CSTTEEECCSSSEEEEECCSSSCCEEEEECC
T ss_pred ccceeEecCCCcEEEEEEecCCCEEEEEEec
Confidence 3457899999999999943 379999743
No 191
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=36.18 E-value=17 Score=32.08 Aligned_cols=28 Identities=11% Similarity=0.006 Sum_probs=22.8
Q ss_pred hcccccCcCCcCceeecc----CCCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|. +..+|+|...
T Consensus 19 ~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~ 50 (476)
T 2y94_A 19 ILGDTLGVGTFGKVKVGKHELTGHKVAVKILN 50 (476)
T ss_dssp EEEEEEECCSSSCEEEEEETTTCCEEEEEEEE
T ss_pred EEEEEEeeCCCeEEEEEEECCCCCEEEEEEEE
Confidence 467889999999999993 3389999764
No 192
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=36.04 E-value=26 Score=27.54 Aligned_cols=28 Identities=21% Similarity=0.163 Sum_probs=21.5
Q ss_pred hcccccCcCCcCceeeccC----C-CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD----K-VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~----~-~~aiKFh~ 117 (188)
.+...||.|.+|.||.|.+ + .+|+|...
T Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~ 46 (326)
T 1blx_A 14 ECVAEIGEGAYGKVFKARDLKNGGRFVALKRVR 46 (326)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTTEEEEEEEEE
T ss_pred eeeeeecccccEEEEEEEecCCCCEEEEEEEec
Confidence 3557899999999999943 2 68888765
No 193
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=35.89 E-value=19 Score=27.45 Aligned_cols=28 Identities=21% Similarity=0.152 Sum_probs=22.1
Q ss_pred cccccCcCCcCceeecc----CCCeeEEeeeh
Q 040944 91 QNSEAGRGSEPDRHNAS----DKVGAIIFCEY 118 (188)
Q Consensus 91 lG~~IGVGKESDVYea~----~~~~aiKFh~~ 118 (188)
+...||.|.+|.||.|. +..+|+|....
T Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~ 46 (284)
T 2a19_B 15 EIELIGSGGFGQVFKAKHRIDGKTYVIKRVKY 46 (284)
T ss_dssp EEEEEECSSSCCEEEEEETTTCCEEEEEEEEC
T ss_pred eeeeeccCCceEEEEEEEcCCCeEEEEEEecc
Confidence 45779999999999993 33889997654
No 194
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=35.87 E-value=10 Score=30.31 Aligned_cols=26 Identities=23% Similarity=0.217 Sum_probs=20.8
Q ss_pred hcccccCcCCcCceeeccC----CCeeEEe
Q 040944 90 QQNSEAGRGSEPDRHNASD----KVGAIIF 115 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~----~~~aiKF 115 (188)
.+...||.|.+|.||.|.+ ..+|+|.
T Consensus 60 ~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~ 89 (311)
T 3p1a_A 60 QRLSRLGHGSYGEVFKVRSKEDGRLYAVKR 89 (311)
T ss_dssp EEEEEEEEETTEEEEEEEETTTSCEEEEEE
T ss_pred eeeheeccCCCeEEEEEEECCCCeEEEEEE
Confidence 4457899999999999932 3799995
No 195
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=35.82 E-value=13 Score=29.55 Aligned_cols=27 Identities=30% Similarity=0.117 Sum_probs=21.0
Q ss_pred cccccCcCCcCceeecc--CCCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNAS--DKVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~--~~~~aiKFh~ 117 (188)
++..||.|.+|.||.|. +..+|+|.-+
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~ 40 (307)
T 2eva_A 12 VEEVVGRGAFGVVCKAKWRAKDVAIKQIE 40 (307)
T ss_dssp EEEEEECCSSSEEEEEEETTEEEEEEECS
T ss_pred eeeEeecCCCceEEEEEECCeeEEEEEec
Confidence 45678999999999993 3378888753
No 196
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=35.72 E-value=10 Score=30.54 Aligned_cols=27 Identities=22% Similarity=0.133 Sum_probs=21.6
Q ss_pred cccccCcCCcCceeecc--CCCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNAS--DKVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~--~~~~aiKFh~ 117 (188)
++..||.|.+|.||.|. +..+|+|.-.
T Consensus 41 i~~~lG~G~~g~V~~~~~~~~~vavK~~~ 69 (309)
T 3p86_A 41 IKEKIGAGSFGTVHRAEWHGSDVAVKILM 69 (309)
T ss_dssp EEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred eeeEeecCCCeEEEEEEECCCcEEEEEec
Confidence 45789999999999993 3389999853
No 197
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=35.32 E-value=16 Score=29.14 Aligned_cols=29 Identities=14% Similarity=-0.055 Sum_probs=23.0
Q ss_pred hcccccCcCCcCceeecc--CCCeeEEeeeh
Q 040944 90 QQNSEAGRGSEPDRHNAS--DKVGAIIFCEY 118 (188)
Q Consensus 90 alG~~IGVGKESDVYea~--~~~~aiKFh~~ 118 (188)
.++..||.|.+|.||.|. +..+|+|....
T Consensus 34 ~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~ 64 (348)
T 2pml_X 34 RIIRTLNQGKFNKIILCEKDNKFYALKKYEK 64 (348)
T ss_dssp EEEEEEECCSSCCEEEEEETTEEEEEEEEEH
T ss_pred EEEEEEcCCCCeEEEEEEcCCceEEEEEeec
Confidence 356789999999999993 34899997654
No 198
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=35.27 E-value=9.3 Score=30.18 Aligned_cols=27 Identities=15% Similarity=0.069 Sum_probs=22.0
Q ss_pred hcccccCcCCcCceeeccCC--CeeEEee
Q 040944 90 QQNSEAGRGSEPDRHNASDK--VGAIIFC 116 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~--~~aiKFh 116 (188)
.++..||.|.+|.||.|... .+|+|.-
T Consensus 40 ~~~~~lg~G~~g~V~~~~~~~~~vavK~~ 68 (337)
T 3mdy_A 40 QMVKQIGKGRYGEVWMGKWRGEKVAVKVF 68 (337)
T ss_dssp EEEEEEEEETTEEEEEEEETTEEEEEEEE
T ss_pred EEEeEeecCCCeEEEEEEECCceEEEEEE
Confidence 46688999999999999433 8999974
No 199
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=35.16 E-value=15 Score=30.72 Aligned_cols=28 Identities=14% Similarity=0.157 Sum_probs=22.3
Q ss_pred hcccccCcCCcCceeeccC----CCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD----KVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~----~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.+ ..+|+|...
T Consensus 12 ~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~ 43 (396)
T 4eut_A 12 LLSDILGQGATANVFRGRHKKTGDLFAIKVFN 43 (396)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEC
T ss_pred EEEEEEEcCCCeEEEEEEECCCCcEEEEEEec
Confidence 3567899999999999933 379999754
No 200
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=35.10 E-value=14 Score=28.32 Aligned_cols=27 Identities=19% Similarity=0.070 Sum_probs=21.4
Q ss_pred cccccCcCCcCceeecc----CCCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
++..||.|.+|.||.|. +..+|+|...
T Consensus 10 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~ 40 (303)
T 1zy4_A 10 EIAVLGQGAFGQVVKARNALDSRYYAIKKIR 40 (303)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEE
T ss_pred hhheeccCCcEEEEEEEEcCCCeEEEEEEEe
Confidence 45789999999999993 2378999754
No 201
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=35.06 E-value=12 Score=31.69 Aligned_cols=27 Identities=30% Similarity=0.164 Sum_probs=15.0
Q ss_pred hcccccCcCCcCceeeccC----CCeeEEee
Q 040944 90 QQNSEAGRGSEPDRHNASD----KVGAIIFC 116 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~----~~~aiKFh 116 (188)
.++..||.|.+|.||.|.+ ..+|+|..
T Consensus 56 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i 86 (458)
T 3rp9_A 56 EIRHLIGTGSYGHVCEAYDKLEKRVVAIKKI 86 (458)
T ss_dssp EECCC-------CEEEEEECC--CEEEEEEE
T ss_pred EEeeEeeecCCeEEEEEEECCCCcEEEEEEe
Confidence 4668899999999999932 38999964
No 202
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=34.98 E-value=11 Score=30.60 Aligned_cols=27 Identities=22% Similarity=0.081 Sum_probs=21.8
Q ss_pred hcccccCcCCcCceeeccC---C-CeeEEee
Q 040944 90 QQNSEAGRGSEPDRHNASD---K-VGAIIFC 116 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~---~-~~aiKFh 116 (188)
.++..||.|.+|.||.|.+ + .+|+|..
T Consensus 27 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~ 57 (353)
T 3coi_A 27 VSPTHVGSGAYGSVCSAIDKRSGEKVAIKKL 57 (353)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEE
T ss_pred EEeeeEecCCCeEEEEEEECCCCCEEEEEEe
Confidence 4568899999999999932 2 8899975
No 203
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=34.92 E-value=13 Score=28.92 Aligned_cols=27 Identities=15% Similarity=0.036 Sum_probs=21.1
Q ss_pred cccccCcCCcCceeecc-------CC-CeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNAS-------DK-VGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~-------~~-~~aiKFh~ 117 (188)
+...||.|.+|.||.|. ++ .+|+|.-.
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~ 48 (295)
T 3ugc_A 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ 48 (295)
T ss_dssp EEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEES
T ss_pred hhheeeccCCEEEEEEEEecccCCCCcEEEEEEcc
Confidence 45789999999999984 22 78999643
No 204
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=34.75 E-value=20 Score=27.86 Aligned_cols=27 Identities=22% Similarity=0.163 Sum_probs=21.0
Q ss_pred cccccCcCCcCceeeccC----CCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNASD----KVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~----~~~aiKFh~ 117 (188)
+...||.|.+|.||.|.+ ..+|+|...
T Consensus 23 i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~ 53 (302)
T 2j7t_A 23 IVGELGDGAFGKVYKAKNKETGALAAAKVIE 53 (302)
T ss_dssp EEEEEECSTTCCEEEEEETTTCCEEEEEEEC
T ss_pred ecceeccCCCeEEEEEEEcCCCcEEEEEEec
Confidence 456789999999999933 378888754
No 205
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=34.61 E-value=10 Score=29.00 Aligned_cols=27 Identities=19% Similarity=-0.049 Sum_probs=21.2
Q ss_pred cccccCcCCcCceeeccCC---CeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNASDK---VGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~~---~~aiKFh~ 117 (188)
+...||.|.+|.||.|... .+|+|..+
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~ 41 (268)
T 3sxs_A 12 LLKELGSGQFGVVKLGKWKGQYDVAVKMIK 41 (268)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEEC
T ss_pred eeeeeccCCCceEEEEEecCceeEEEEEec
Confidence 4577899999999999322 68998764
No 206
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=34.57 E-value=11 Score=29.23 Aligned_cols=28 Identities=18% Similarity=0.103 Sum_probs=21.5
Q ss_pred hcccccCcCCcCceeeccCC----CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASDK----VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~----~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.+. .+|+|...
T Consensus 17 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~ 48 (284)
T 2vgo_A 17 DIGRPLGKGKFGNVYLAREKQNKFIMALKVLF 48 (284)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEE
T ss_pred eeeheecCCCCeEEEEEEEcCCCcEEEEEEEc
Confidence 34678899999999999332 68998753
No 207
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=34.56 E-value=14 Score=30.98 Aligned_cols=28 Identities=14% Similarity=0.242 Sum_probs=22.3
Q ss_pred hcccccCcCCcCceeeccCC---CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASDK---VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~---~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.+. .+|+|...
T Consensus 59 ~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~ 89 (390)
T 2zmd_A 59 SILKQIGSGGSSKVFQVLNEKKQIYAIKYVN 89 (390)
T ss_dssp EEEEEEECCSSEEEEEEECTTCCEEEEEEEE
T ss_pred EEEEEEccCCCeEEEEEEcCCCCEEEEEEEe
Confidence 45678999999999999433 78999764
No 208
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=34.46 E-value=16 Score=29.52 Aligned_cols=28 Identities=14% Similarity=-0.007 Sum_probs=22.0
Q ss_pred hcccccCcCCcCceeeccC----CCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD----KVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~----~~~aiKFh~ 117 (188)
.+...||.|.+|.||.|.+ ..+|+|..+
T Consensus 38 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~ 69 (360)
T 3llt_A 38 LVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVR 69 (360)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEC
T ss_pred EEEEEEcccCCeEEEEEEECCCCeEEEEEEec
Confidence 3457899999999999933 279999864
No 209
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=34.38 E-value=18 Score=28.22 Aligned_cols=28 Identities=18% Similarity=0.098 Sum_probs=21.5
Q ss_pred hcccccCcCCcCceeeccC----CCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD----KVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~----~~~aiKFh~ 117 (188)
.+...||.|.+|.||.|.+ ..+|+|...
T Consensus 25 ~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~ 56 (285)
T 3is5_A 25 IFKRKLGSGAFGDVHLVEERSSGLERVIKTIN 56 (285)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEE
T ss_pred eecceeccCCCeEEEEEEEccCCceEEEEEee
Confidence 4567899999999999832 278888754
No 210
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=34.34 E-value=13 Score=29.02 Aligned_cols=28 Identities=18% Similarity=0.198 Sum_probs=21.9
Q ss_pred hcccccCcCCcCceeeccC---------CCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD---------KVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~---------~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.. ..+|+|...
T Consensus 30 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~ 66 (316)
T 2xir_A 30 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK 66 (316)
T ss_dssp EEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEEC
T ss_pred eeeeEEcCCCceeEEEEEEecCCccccceEEEEEecc
Confidence 4568899999999999831 278999754
No 211
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=34.19 E-value=16 Score=29.36 Aligned_cols=27 Identities=11% Similarity=0.091 Sum_probs=21.1
Q ss_pred cccccCcCCcCceeeccC----CCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNASD----KVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~----~~~aiKFh~ 117 (188)
+...||.|.+|.||.|.+ ..+|+|...
T Consensus 6 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~ 36 (324)
T 3mtl_A 6 KLDKLGEGTYATVYKGKSKLTDNLVALKEIR 36 (324)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEC
T ss_pred EEEEEcCCCCEEEEEEEECCCCcEEEEEEEe
Confidence 457899999999999932 278999654
No 212
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=34.01 E-value=16 Score=30.21 Aligned_cols=27 Identities=15% Similarity=0.059 Sum_probs=14.4
Q ss_pred hcccccCcCCcCceeecc----CCCeeEEee
Q 040944 90 QQNSEAGRGSEPDRHNAS----DKVGAIIFC 116 (188)
Q Consensus 90 alG~~IGVGKESDVYea~----~~~~aiKFh 116 (188)
.+...||.|.+|.||.|. +..+|+|..
T Consensus 12 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i 42 (388)
T 3oz6_A 12 ELVKKLGKGAYGIVWKSIDRRTGEVVAVKKI 42 (388)
T ss_dssp EEEEC-------CEEEEEETTTCCEEEEEEE
T ss_pred EEEEEeeeCCCeEEEEEEECCCCCEEEEEEe
Confidence 355789999999999993 238899954
No 213
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=34.00 E-value=15 Score=28.96 Aligned_cols=28 Identities=14% Similarity=0.242 Sum_probs=21.9
Q ss_pred hcccccCcCCcCceeeccCC---CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASDK---VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~---~~aiKFh~ 117 (188)
.+...||.|.+|.||.|.+. .+|+|...
T Consensus 31 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~ 61 (313)
T 3cek_A 31 SILKQIGSGGSSKVFQVLNEKKQIYAIKYVN 61 (313)
T ss_dssp EEEEEEECCSSEEEEEEECTTCCEEEEEEEE
T ss_pred EEEEEecCCCCEEEEEEEcCCCcEEEEEEec
Confidence 35578999999999999433 68999764
No 214
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=33.98 E-value=15 Score=28.73 Aligned_cols=27 Identities=15% Similarity=-0.047 Sum_probs=21.5
Q ss_pred hcccccCcCCcCceeeccC----CCeeEEee
Q 040944 90 QQNSEAGRGSEPDRHNASD----KVGAIIFC 116 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~----~~~aiKFh 116 (188)
.++..||.|.+|.||.|.+ ..+|+|..
T Consensus 31 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~ 61 (337)
T 3ll6_A 31 RVRRVLAEGGFAFVYEAQDVGSGREYALKRL 61 (337)
T ss_dssp EEEEEEECCSSEEEEEEEETTTCCEEEEEEE
T ss_pred EEEEEEccCCceEEEEEEECCCCcEEEEEEe
Confidence 4567899999999999943 27999953
No 215
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=33.97 E-value=11 Score=29.91 Aligned_cols=27 Identities=22% Similarity=0.164 Sum_probs=21.0
Q ss_pred cccccCcCCcCceeeccC----CCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNASD----KVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~----~~~aiKFh~ 117 (188)
+...||.|.+|.||.|.+ ..+|+|...
T Consensus 24 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~ 54 (297)
T 3fxz_A 24 RFEKIGQGASGTVYTAMDVATGQEVAIRQMN 54 (297)
T ss_dssp CCEEEEEETTEEEEEEEBTTTCCEEEEEEEE
T ss_pred eeeeeccCCCeEEEEEEECCCCcEEEEEEee
Confidence 446789999999999933 278998754
No 216
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=33.84 E-value=13 Score=30.24 Aligned_cols=27 Identities=22% Similarity=0.231 Sum_probs=21.5
Q ss_pred cccccCcCCcCceeeccC---C-CeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNASD---K-VGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~---~-~~aiKFh~ 117 (188)
++..||.|.+|.||.|.+ + .+|+|+.+
T Consensus 9 ~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~ 39 (321)
T 1tki_A 9 IAEDLGRGEFGIVHRCVETSSKKTYMAKFVK 39 (321)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEC
T ss_pred eeeEEecCCCeEEEEEEECCCCcEEEEEEEe
Confidence 567899999999999933 2 78888764
No 217
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=33.80 E-value=18 Score=28.35 Aligned_cols=28 Identities=18% Similarity=0.153 Sum_probs=20.0
Q ss_pred hcccccCcCCcCceeecc----CCCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
.+...||.|.+|.||.|. +..+|+|...
T Consensus 35 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~ 66 (310)
T 2wqm_A 35 RIEKKIGRGQFSEVYRAACLLDGVPVALKKVQ 66 (310)
T ss_dssp EEEEEEECC--CEEEEEEETTTCCEEEEEEEC
T ss_pred EEEEeecCCCCceEEEEEEcCCCceEEEEeee
Confidence 455789999999999983 3389999654
No 218
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=33.73 E-value=11 Score=29.06 Aligned_cols=27 Identities=11% Similarity=-0.092 Sum_probs=21.2
Q ss_pred cccccCcCCcCceeeccC--C-CeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNASD--K-VGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~--~-~~aiKFh~ 117 (188)
++..||.|.+|.||.|.. . .+|+|..+
T Consensus 17 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~ 46 (279)
T 1qpc_A 17 LVERLGAGQFGEVWMGYYNGHTKVAVKSLK 46 (279)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEEC
T ss_pred heeeecCCCCeEEEEEEEcCCcEEEEEEec
Confidence 457899999999999932 2 78898654
No 219
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=33.53 E-value=15 Score=30.59 Aligned_cols=28 Identities=14% Similarity=0.028 Sum_probs=22.0
Q ss_pred hcccccCcCCcCceeeccCC-----------CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASDK-----------VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~-----------~~aiKFh~ 117 (188)
.++..||.|.+|.||.|... .+|+|.-+
T Consensus 84 ~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~ 122 (370)
T 2psq_A 84 TLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK 122 (370)
T ss_dssp EEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECC
T ss_pred EeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEec
Confidence 46788999999999998321 48999764
No 220
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=33.36 E-value=15 Score=28.60 Aligned_cols=27 Identities=19% Similarity=0.085 Sum_probs=20.8
Q ss_pred ccccCcCCcCceeecc-----CC-CeeEEeeeh
Q 040944 92 NSEAGRGSEPDRHNAS-----DK-VGAIIFCEY 118 (188)
Q Consensus 92 G~~IGVGKESDVYea~-----~~-~~aiKFh~~ 118 (188)
+..||.|.+|.||.|. .+ .+|+|..+.
T Consensus 15 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~ 47 (287)
T 1u59_A 15 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQ 47 (287)
T ss_dssp EEEEECCTTEEEEEEEEC---CCEEEEEEEECS
T ss_pred hccccccCceeEEEeEeccCCCcceEEEEecCC
Confidence 3479999999999984 22 689988654
No 221
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=33.35 E-value=12 Score=29.99 Aligned_cols=28 Identities=18% Similarity=0.100 Sum_probs=21.8
Q ss_pred hcccccCcCCcCceeeccC---C-CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD---K-VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~---~-~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.+ + .+|+|...
T Consensus 54 ~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~ 85 (340)
T 3an0_A 54 EPIMELGRGAYGVVEKMRHVPSGQIMAVKRIR 85 (340)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEC
T ss_pred eEeeEecccCCEEEEEEEEcCCCCEEEEEEec
Confidence 3557799999999999943 3 79999653
No 222
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=33.35 E-value=15 Score=28.63 Aligned_cols=28 Identities=25% Similarity=0.099 Sum_probs=21.3
Q ss_pred hcccccCcCCcCceeeccCC----CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASDK----VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~----~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.+. .+|+|...
T Consensus 29 ~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~ 60 (290)
T 1t4h_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQ 60 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEE
T ss_pred EeeeeccCCCCeEEEEeEecCCceEEEEEEec
Confidence 45677999999999999332 67777754
No 223
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=33.33 E-value=17 Score=29.83 Aligned_cols=28 Identities=25% Similarity=0.229 Sum_probs=21.9
Q ss_pred hcccccCcCCcCceeeccCC----CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASDK----VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~----~~aiKFh~ 117 (188)
.+...||.|.+|.||.|.+. .+|+|..+
T Consensus 56 ~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~ 87 (349)
T 2w4o_A 56 EVESELGRGATSIVYRCKQKGTQKPYALKVLK 87 (349)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEE
T ss_pred EEeeEEeeCCCEEEEEEEECCCCcEEEEEEec
Confidence 35578999999999999332 68999754
No 224
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=33.29 E-value=13 Score=30.13 Aligned_cols=28 Identities=11% Similarity=-0.052 Sum_probs=21.5
Q ss_pred hcccccCcCCcCceeecc------------CCCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNAS------------DKVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~------------~~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|. +..+|+|.-.
T Consensus 45 ~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~ 84 (352)
T 2jii_A 45 KLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDA 84 (352)
T ss_dssp EEEEEEEEETTEEEEEEEECC-----------CEEEEEEE
T ss_pred EEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEec
Confidence 355778999999999993 3489999864
No 225
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=33.29 E-value=12 Score=30.93 Aligned_cols=29 Identities=21% Similarity=0.088 Sum_probs=22.8
Q ss_pred hhcccccCcCCcCceeeccC----CCeeEEeee
Q 040944 89 NQQNSEAGRGSEPDRHNASD----KVGAIIFCE 117 (188)
Q Consensus 89 ~alG~~IGVGKESDVYea~~----~~~aiKFh~ 117 (188)
-.++..||.|.+|.||.|.+ ..+|+|.-.
T Consensus 44 y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~ 76 (371)
T 4exu_A 44 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS 76 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC
T ss_pred EEEEeEEecCCCeEEEEEEECCCCCEEEEEEec
Confidence 34668899999999999932 288999654
No 226
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=33.27 E-value=18 Score=28.88 Aligned_cols=28 Identities=21% Similarity=0.194 Sum_probs=21.9
Q ss_pred hcccccCcCCcCceeeccC---CCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD---KVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~---~~~aiKFh~ 117 (188)
.+...||.|.+|.||.|.+ ..+|+|...
T Consensus 24 ~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~ 54 (311)
T 3niz_A 24 QKLEKVGEGTYGVVYKAKDSQGRIVALKRIR 54 (311)
T ss_dssp EEEEEEEECSSCEEEEEEETTSCEEEEEEEC
T ss_pred HhhhhccCCCCeEEEEEEECCCCEEEEEEEe
Confidence 3457899999999999943 378999754
No 227
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=33.20 E-value=16 Score=27.75 Aligned_cols=28 Identities=14% Similarity=0.070 Sum_probs=22.1
Q ss_pred hcccccCcCCcCceeecc----CCCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
.+...||.|.+|.||.|. +..+|+|..+
T Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~ 45 (289)
T 1x8b_A 14 HELEKIGSGEFGSVFKCVKRLDGCIYAIKRSK 45 (289)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEE
T ss_pred hhhhhhcCCCceEEEEEEEcCCCceEEEEEec
Confidence 355789999999999993 3389999755
No 228
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=33.06 E-value=18 Score=28.42 Aligned_cols=27 Identities=15% Similarity=0.040 Sum_probs=21.4
Q ss_pred cccccCcCCcCceeecc----CCCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
++..||.|.+|.||.|. +..+|+|...
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~ 43 (304)
T 2jam_A 13 FMEVLGSGAFSEVFLVKQRLTGKLFALKCIK 43 (304)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEE
T ss_pred eeeeccCCCCceEEEEEECCCCCEEEEEEEe
Confidence 56789999999999993 3378999754
No 229
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=32.99 E-value=22 Score=29.42 Aligned_cols=27 Identities=11% Similarity=0.009 Sum_probs=21.2
Q ss_pred hcccccCcCCcCceeecc-----CC----CeeEEee
Q 040944 90 QQNSEAGRGSEPDRHNAS-----DK----VGAIIFC 116 (188)
Q Consensus 90 alG~~IGVGKESDVYea~-----~~----~~aiKFh 116 (188)
.++..||.|.+|.||.|. +. .+|+|..
T Consensus 74 ~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~ 109 (367)
T 3l9p_A 74 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 109 (367)
T ss_dssp EEEEECCCCSSSCEEEEEECC-----CCEEEEEEEC
T ss_pred EEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEec
Confidence 456789999999999985 11 6899975
No 230
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=32.87 E-value=25 Score=29.07 Aligned_cols=27 Identities=19% Similarity=0.177 Sum_probs=21.2
Q ss_pred cccccCcCCcCceeeccC----CCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNASD----KVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~----~~~aiKFh~ 117 (188)
+...||.|.+|.||.|.+ ..+|+|..+
T Consensus 24 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~ 54 (361)
T 3uc3_A 24 FVKDIGSGNFGVARLMRDKLTKELVAVKYIE 54 (361)
T ss_dssp EEEEESSSTTSSEEEEEETTTCCEEEEEEEE
T ss_pred EEEEeccCCCEEEEEEEECCCCcEEEEEEEe
Confidence 456799999999999933 278999754
No 231
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=32.64 E-value=13 Score=29.07 Aligned_cols=27 Identities=15% Similarity=-0.011 Sum_probs=21.1
Q ss_pred cccccCcCCcCceeecc---CCCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNAS---DKVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~---~~~~aiKFh~ 117 (188)
+...||.|.+|.||.|. +..+|+|...
T Consensus 6 ~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~ 35 (288)
T 1ob3_A 6 GLEKIGEGTYGVVYKAQNNYGETFALKKIR 35 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEEEC
T ss_pred hhhhcccCCCEEEEEEEcCCCCEEEEEEEe
Confidence 45679999999999993 3378888653
No 232
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=32.63 E-value=16 Score=29.60 Aligned_cols=27 Identities=15% Similarity=0.170 Sum_probs=21.3
Q ss_pred cccccCcCCcCceeecc----CCCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
++..||.|.+|.||.|. +..+|+|...
T Consensus 11 i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~ 41 (323)
T 3tki_A 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD 41 (323)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEE
T ss_pred eeeEEecCCCEEEEEEEECCCCcEEEEEEEE
Confidence 45789999999999992 3378999753
No 233
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=32.48 E-value=13 Score=29.64 Aligned_cols=28 Identities=29% Similarity=0.141 Sum_probs=22.1
Q ss_pred hcccccCcCCcCceeeccC---C-CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD---K-VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~---~-~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.+ + .+|+|..+
T Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~ 45 (353)
T 2b9h_A 14 QLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE 45 (353)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEC
T ss_pred EEeeEEcCCCCeEEEEEEECCCCcEEEEEeec
Confidence 4568899999999999932 2 78999754
No 234
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=32.33 E-value=18 Score=29.61 Aligned_cols=28 Identities=11% Similarity=0.065 Sum_probs=22.3
Q ss_pred hcccccCcCCcCceeecc----CCCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|. +..+|+|...
T Consensus 27 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~ 58 (351)
T 3c0i_A 27 ELCEVIGKGPFSVVRRCINRETGQQFAVKIVD 58 (351)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEE
T ss_pred EEeeEEeeCCCEEEEEEEECCCCCEEEEEEEE
Confidence 456789999999999993 2389999754
No 235
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=32.11 E-value=17 Score=28.27 Aligned_cols=28 Identities=11% Similarity=0.003 Sum_probs=21.9
Q ss_pred hcccccCcCCcCceeecc-------CC-CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNAS-------DK-VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~-------~~-~~aiKFh~ 117 (188)
.+...||.|.+|.||.|. .+ .+|+|...
T Consensus 24 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~ 59 (302)
T 4e5w_A 24 KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLK 59 (302)
T ss_dssp EEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC
T ss_pred hhhhccCCCCceEEEEEEEccccCccCeEEEEEEec
Confidence 455789999999999985 22 88999754
No 236
>1sd4_A Penicillinase repressor; BLAI, MECI, methicillin, B-lactam, DNA binding PR; 2.00A {Staphylococcus aureus} SCOP: a.4.5.39 PDB: 1xsd_A
Probab=32.03 E-value=14 Score=25.79 Aligned_cols=55 Identities=11% Similarity=0.035 Sum_probs=38.6
Q ss_pred cccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 9 RYLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 9 r~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
..|++.+|.||..|-. ++=+....|++.. -.+.+++...+. ..|++|++ |||.|.
T Consensus 6 ~~Lt~~q~~vL~~L~~----~~~~t~~el~~~l----~~~~~~~~~Tvt----~~l~rLe~kGlv~R~ 61 (126)
T 1sd4_A 6 VEISMAEWDVMNIIWD----KKSVSANEIVVEI----QKYKEVSDKTIR----TLITRLYKKEIIKRY 61 (126)
T ss_dssp CCCCHHHHHHHHHHHH----SSSEEHHHHHHHH----HTTSCCCHHHHH----HHHHHHHHTTSEEEE
T ss_pred CCCCHHHHHHHHHHHh----cCCCCHHHHHHHH----hhcCCCChhhHH----HHHHHHHHCCceEEE
Confidence 4688999999999864 3446777777764 112345544555 79999999 799984
No 237
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=31.96 E-value=17 Score=28.57 Aligned_cols=27 Identities=11% Similarity=-0.093 Sum_probs=19.4
Q ss_pred hcccccCcCCcCceeeccC----CCeeEEee
Q 040944 90 QQNSEAGRGSEPDRHNASD----KVGAIIFC 116 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~----~~~aiKFh 116 (188)
.++..||.|.+|.||.|.+ ..+|+|.-
T Consensus 32 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~ 62 (317)
T 2buj_A 32 LFIQKLGEGGFSYVDLVEGLHDGHFYALKRI 62 (317)
T ss_dssp EEEEEEEC--CEEEEEEEETTTCCEEEEEEE
T ss_pred EEEEEecCCCCeEEEEEEecCCCcEEEEEEE
Confidence 3567899999999999942 28899954
No 238
>1r1u_A CZRA, repressor protein; zinc, DNA binding, transcriptional regulation, winged HTH protein, transcription repressor; 2.00A {Staphylococcus aureus} SCOP: a.4.5.5 PDB: 1r1v_A 2kjb_A 2kjc_A
Probab=31.90 E-value=15 Score=25.66 Aligned_cols=64 Identities=5% Similarity=0.107 Sum_probs=42.0
Q ss_pred HHhcccC-ccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccCCCccCCcc
Q 040944 6 DVLRYLS-KDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKDPALNSKKE 83 (188)
Q Consensus 6 e~~r~L~-~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~~~~~~~Ye 83 (188)
..++.|. +-.++||..+-. .-.....|++.. |++.+.+. +.|..|.. +||.+.. .+.+.
T Consensus 18 ~~~~~l~~~~r~~IL~~L~~-----~~~~~~ela~~l--------~is~stvs----~~L~~L~~~Glv~~~~--~gr~~ 78 (106)
T 1r1u_A 18 EIFKALGDYNRIRIMELLSV-----SEASVGHISHQL--------NLSQSNVS----HQLKLLKSVHLVKAKR--QGQSM 78 (106)
T ss_dssp HHHHHTCSHHHHHHHHHHHH-----CCBCHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEEE--ETTEE
T ss_pred HHHHHhCCHHHHHHHHHHHh-----CCCCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCCeEEEE--eCCEE
Confidence 3455555 456788888752 235677788776 99855555 68888888 7887641 34455
Q ss_pred ceehh
Q 040944 84 GVSEE 88 (188)
Q Consensus 84 GY~Lt 88 (188)
.|+++
T Consensus 79 ~y~l~ 83 (106)
T 1r1u_A 79 IYSLD 83 (106)
T ss_dssp EEEES
T ss_pred EEEEC
Confidence 67765
No 239
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=31.89 E-value=16 Score=29.25 Aligned_cols=28 Identities=14% Similarity=0.039 Sum_probs=21.7
Q ss_pred hcccccCcCCcCceeeccC-----------CCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD-----------KVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~-----------~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.. ..+|+|.-+
T Consensus 38 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~ 76 (334)
T 2pvf_A 38 TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK 76 (334)
T ss_dssp EEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECC
T ss_pred EEeeEEeecCceeEEEeEeccccccccccceEEEEeeec
Confidence 4568899999999999832 158888754
No 240
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=31.83 E-value=15 Score=28.56 Aligned_cols=28 Identities=18% Similarity=0.175 Sum_probs=22.0
Q ss_pred hcccccCcCCcCceeeccCC----CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASDK----VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~----~~aiKFh~ 117 (188)
.+...||.|..|.||.|.+. .+|+|...
T Consensus 20 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~ 51 (298)
T 1phk_A 20 EPKEILGRGVSSVVRRCIHKPTCKEYAVKIID 51 (298)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEE
T ss_pred ceeeeecCCCceEEEEEEEcCcCceEEEEEEe
Confidence 34577999999999999332 78999764
No 241
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=31.70 E-value=12 Score=30.86 Aligned_cols=28 Identities=29% Similarity=0.220 Sum_probs=22.3
Q ss_pred hcccccCcCCcCceeeccCC----CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASDK----VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~----~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.+. .+|+|..+
T Consensus 57 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~ 88 (382)
T 2vx3_A 57 EIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK 88 (382)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTEEEEEEEEC
T ss_pred EEEEEEeecCCEEEEEEEEcCCCcEEEEEEEe
Confidence 45678999999999999322 79999764
No 242
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=31.66 E-value=15 Score=29.24 Aligned_cols=27 Identities=26% Similarity=0.305 Sum_probs=21.2
Q ss_pred cccccCcCCcCceeeccC---C-CeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNASD---K-VGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~---~-~~aiKFh~ 117 (188)
++..||.|.+|.||.|.+ + .+|+|...
T Consensus 38 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~ 68 (309)
T 2h34_A 38 LRRLVGRGGMGDVYEAEDTVRERIVALKLMS 68 (309)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEECG
T ss_pred EEEEEcCCCCeeEEEEEEcCCCeEEEEEecC
Confidence 457789999999999942 2 78999754
No 243
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=31.43 E-value=16 Score=28.16 Aligned_cols=28 Identities=18% Similarity=-0.035 Sum_probs=19.0
Q ss_pred hcccccCcCCcCceeeccCC---CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASDK---VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~---~~aiKFh~ 117 (188)
.+...||.|.+|.||.|... .+|+|..+
T Consensus 27 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~ 57 (283)
T 3gen_A 27 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIK 57 (283)
T ss_dssp EEEEECC---CEEEEEEEETTTEEEEEEEEC
T ss_pred HhHhhcCCCCCceEEEEEEcCCCeEEEEEec
Confidence 45578999999999999322 78898765
No 244
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=31.40 E-value=15 Score=31.54 Aligned_cols=28 Identities=14% Similarity=0.025 Sum_probs=22.4
Q ss_pred hcccccCcCCcCceeeccC--CCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD--KVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~--~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.. ..+|+|..+
T Consensus 196 ~~~~~lG~G~fg~V~~~~~~~~~vavK~~~ 225 (450)
T 1k9a_A 196 KLLQTIGKGEFGDVMLGDYRGNKVAVKCIK 225 (450)
T ss_dssp EEEEEEEECSSEEEEEEEETTEEEEEEEES
T ss_pred EEEeeecCcCCeeEEEEEecCCeEEEEEeC
Confidence 4567899999999999933 389999764
No 245
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=31.39 E-value=13 Score=29.57 Aligned_cols=29 Identities=10% Similarity=0.063 Sum_probs=23.0
Q ss_pred hhcccccCcCCcCceeecc--CCCeeEEeee
Q 040944 89 NQQNSEAGRGSEPDRHNAS--DKVGAIIFCE 117 (188)
Q Consensus 89 ~alG~~IGVGKESDVYea~--~~~~aiKFh~ 117 (188)
-.++..||.|.+|.||.|. +..+|+|...
T Consensus 44 y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~ 74 (342)
T 1b6c_B 44 IVLQESIGKGRFGEVWRGKWRGEEVAVKIFS 74 (342)
T ss_dssp CEEEEEEEEETTEEEEEEEETTEEEEEEEEC
T ss_pred EEEEeeecCCCCcEEEEEEEcCccEEEEEeC
Confidence 3567889999999999993 3389999753
No 246
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=31.35 E-value=15 Score=29.58 Aligned_cols=27 Identities=22% Similarity=0.169 Sum_probs=21.1
Q ss_pred cccccCcCCcCceeeccC---C-CeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNASD---K-VGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~---~-~~aiKFh~ 117 (188)
+...||.|.+|.||.|.+ + .+|+|..+
T Consensus 38 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~ 68 (329)
T 3gbz_A 38 RITKLGEGTYGEVYKAIDTVTNETVAIKRIR 68 (329)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEECC
T ss_pred EEEEEEecCCeEEEEEEECCCCceEEEEEEc
Confidence 457899999999999932 2 78999653
No 247
>2o0y_A Transcriptional regulator; ICLR-family, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.00A {Rhodococcus SP}
Probab=31.26 E-value=29 Score=28.16 Aligned_cols=47 Identities=13% Similarity=0.146 Sum_probs=31.3
Q ss_pred hHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 17 KVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 17 RVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
|.|..++.-.....-+.+..|++.+ |++...+. +.+..|.. ++|.++
T Consensus 24 r~l~iL~~l~~~~~~~~~~eia~~~--------gl~kstv~----r~l~tL~~~G~v~~~ 71 (260)
T 2o0y_A 24 RVIDLLELFDAAHPTRSLKELVEGT--------KLPKTTVV----RLVATMCARSVLTSR 71 (260)
T ss_dssp HHHHHHTTCBTTBSSBCHHHHHHHH--------CCCHHHHH----HHHHHHHHTTSEEEC
T ss_pred HHHHHHHHHhhCCCCcCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCCEEEC
Confidence 3444444433334567888888887 99844444 67888887 798885
No 248
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=31.23 E-value=16 Score=28.55 Aligned_cols=26 Identities=19% Similarity=0.140 Sum_probs=20.3
Q ss_pred cccccCcCCcCceeeccC----CCeeEEee
Q 040944 91 QNSEAGRGSEPDRHNASD----KVGAIIFC 116 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~----~~~aiKFh 116 (188)
+...||.|..|.||.|.+ ..+|+|..
T Consensus 7 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~ 36 (311)
T 4agu_A 7 KIGKIGEGSYGVVFKCRNRDTGQIVAIKKF 36 (311)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEE
T ss_pred EeeEEeecCCeEEEEEEeCCCCcEEEEEEe
Confidence 457899999999999933 37888843
No 249
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=31.11 E-value=17 Score=29.15 Aligned_cols=26 Identities=23% Similarity=0.192 Sum_probs=20.8
Q ss_pred ccccCcCCcCceeecc----CCCeeEEeee
Q 040944 92 NSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 92 G~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
+..||.|.+|.||.|. +..+|+|.-+
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~ 63 (327)
T 3lm5_A 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLK 63 (327)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEE
T ss_pred cceeCCCCCeEEEEEEECCCCCEEEEEEEe
Confidence 3679999999999993 3388999754
No 250
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=31.10 E-value=15 Score=31.51 Aligned_cols=28 Identities=14% Similarity=0.013 Sum_probs=22.3
Q ss_pred hcccccCcCCcCceeeccCC---CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASDK---VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~---~~aiKFh~ 117 (188)
.++..||.|.+|.||.|... .+|+|..+
T Consensus 187 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~ 217 (452)
T 1fmk_A 187 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK 217 (452)
T ss_dssp EEEEEEEECSSCEEEEEEETTTEEEEEEECC
T ss_pred eeeeeecCCCCeEEEEEEECCCceEEEEEec
Confidence 45678999999999999433 68999765
No 251
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=30.73 E-value=15 Score=29.20 Aligned_cols=28 Identities=18% Similarity=0.175 Sum_probs=21.0
Q ss_pred hcccccCcCCcCceeeccC---C-CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD---K-VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~---~-~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.+ + .+|+|.-.
T Consensus 25 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~ 56 (327)
T 3aln_A 25 KDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIR 56 (327)
T ss_dssp EC-CEEEECSSEEEEEEEETTTTEEEEEEEEE
T ss_pred hehheeccCCCEEEEEEEEcCCCCEEEEEEee
Confidence 3457799999999999933 2 78999653
No 252
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=30.63 E-value=25 Score=27.52 Aligned_cols=27 Identities=22% Similarity=0.095 Sum_probs=17.2
Q ss_pred cccccCcCCcCceeecc----CCCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
+...||.|.+|.||.|. +..+|+|...
T Consensus 33 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~ 63 (314)
T 3com_A 33 VLEKLGEGSYGSVYKAIHKETGQIVAIKQVP 63 (314)
T ss_dssp EEEECC----CEEEEEEETTTCCEEEEEEEE
T ss_pred hheeeccCCCeEEEEEEECCCCCEEEEEecC
Confidence 45779999999999993 3378898654
No 253
>1p4x_A Staphylococcal accessory regulator A homologue; winged-helix protein, transcription; 2.20A {Staphylococcus aureus} SCOP: a.4.5.28 a.4.5.28
Probab=30.59 E-value=26 Score=28.90 Aligned_cols=52 Identities=21% Similarity=0.248 Sum_probs=39.4
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
.|+...|.||..|-. ..++=++...|.+.. +++...+. ..|++|++ |||.|.
T Consensus 31 ~lt~~q~~vL~~L~~--~~~~~~~~~el~~~l--------~~~~~t~t----~~l~rLe~~G~i~R~ 83 (250)
T 1p4x_A 31 DMTIKEFILLTYLFH--QQENTLPFKKIVSDL--------CYKQSDLV----QHIKVLVKHSYISKV 83 (250)
T ss_dssp SSCHHHHHHHHHHHS--CSCSEEEHHHHHHHS--------SSCGGGTH----HHHHHHHHTTSCEEE
T ss_pred CCCHHHHHHHHHHHh--cCCCCcCHHHHHHHH--------CCCHhhHH----HHHHHHHHCCCEEec
Confidence 478889999999865 112346778888775 78766666 79999999 799875
No 254
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=30.58 E-value=13 Score=29.31 Aligned_cols=28 Identities=14% Similarity=0.066 Sum_probs=21.9
Q ss_pred hcccccCcCCcCceeeccC---C--CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD---K--VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~---~--~~aiKFh~ 117 (188)
.+...||.|.+|.||.|.+ + .+|+|..+
T Consensus 22 ~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~ 54 (355)
T 2eu9_A 22 EIVGNLGEGTFGKVVECLDHARGKSQVALKIIR 54 (355)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTTEEEEEEEEC
T ss_pred EEEEEeeccCCeEEEEEEecCCCceEEEEEEEc
Confidence 3557899999999999932 2 68999864
No 255
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=30.42 E-value=24 Score=27.48 Aligned_cols=27 Identities=19% Similarity=0.111 Sum_probs=15.6
Q ss_pred cccccCcCCcCceeecc----CCCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
+...||.|.+|.||.|. +..+|+|...
T Consensus 29 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~ 59 (318)
T 2dyl_A 29 NLGEMGSGTCGQVWKMRFRKTGHVIAVKQMR 59 (318)
T ss_dssp EEEEC------CEEEEEETTTCCEEEEEEEE
T ss_pred ccceeeecCCeeEEEEEEecCCeEEEEEEec
Confidence 45679999999999993 3388999764
No 256
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=30.41 E-value=17 Score=30.27 Aligned_cols=27 Identities=26% Similarity=0.069 Sum_probs=17.5
Q ss_pred hcccccCcCCcCceeeccC---C-CeeEEee
Q 040944 90 QQNSEAGRGSEPDRHNASD---K-VGAIIFC 116 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~---~-~~aiKFh 116 (188)
.+...||.|.+|.||.|.+ + .+|+|..
T Consensus 32 ~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~ 62 (367)
T 2fst_X 32 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKL 62 (367)
T ss_dssp EEEEECC----CCEEEEEETTTTEEEEEEEC
T ss_pred EEeeEEeecCCeEEEEEEECCCCCEEEEEEe
Confidence 3457899999999999932 2 8999975
No 257
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=30.40 E-value=16 Score=31.23 Aligned_cols=29 Identities=14% Similarity=0.008 Sum_probs=23.2
Q ss_pred hcccccCcCCcCceeeccC---CCeeEEeeeh
Q 040944 90 QQNSEAGRGSEPDRHNASD---KVGAIIFCEY 118 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~---~~~aiKFh~~ 118 (188)
.++..||.|.+|.||.|.. ..+|+|..+.
T Consensus 191 ~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~ 222 (454)
T 1qcf_A 191 KLEKKLGAGQFGEVWMATYNKHTKVAVKTMKP 222 (454)
T ss_dssp EEEEEEECCSSEEEEEEEETTTEEEEEEEECT
T ss_pred EEEEEcccCCceEEEEEEECCccEEEEEEecC
Confidence 4567899999999999943 2799997653
No 258
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=30.40 E-value=14 Score=30.20 Aligned_cols=27 Identities=26% Similarity=0.030 Sum_probs=21.2
Q ss_pred cccccCcCCcCceeeccCC----CeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNASDK----VGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~~----~~aiKFh~ 117 (188)
+...||.|.+|.||.|.+. .+|+|.-.
T Consensus 31 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~ 61 (364)
T 3qyz_A 31 NLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS 61 (364)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEC
T ss_pred EEEEeecCCCeEEEEEEECCCCeEEEEEEec
Confidence 4577899999999999332 78999754
No 259
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=30.38 E-value=23 Score=28.89 Aligned_cols=27 Identities=19% Similarity=0.043 Sum_probs=21.4
Q ss_pred cccccCcCCcCceeecc----CCCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
+...||.|.+|.||.|. +..+|+|..+
T Consensus 10 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~ 40 (318)
T 1fot_A 10 ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLK 40 (318)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEE
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEE
Confidence 45779999999999983 3378999764
No 260
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=30.33 E-value=13 Score=29.44 Aligned_cols=27 Identities=15% Similarity=0.129 Sum_probs=21.4
Q ss_pred cccccCcCCcCceeeccC---------CCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNASD---------KVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~---------~~~aiKFh~ 117 (188)
++..||.|.+|.||.|.+ ..+|+|..+
T Consensus 51 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~ 86 (343)
T 1luf_A 51 YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLK 86 (343)
T ss_dssp EEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECC
T ss_pred eeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEec
Confidence 557899999999999933 368999864
No 261
>2h09_A Transcriptional regulator MNTR; transcription regulator, diphtheria toxin, manganese transport, structural genomics, NPPSFA; 2.10A {Escherichia coli}
Probab=30.30 E-value=15 Score=26.84 Aligned_cols=42 Identities=17% Similarity=0.110 Sum_probs=28.7
Q ss_pred cccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccCCCccCCccceehh
Q 040944 30 EIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKDPALNSKKEGVSEE 88 (188)
Q Consensus 30 E~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~~~~~~~YeGY~Lt 88 (188)
.-+....|++.. |++...+. +.|++|++ +||.+. . ..|+.+|
T Consensus 53 ~~~~~~~la~~l--------~vs~~tvs----~~l~~Le~~Glv~r~---~--~~~~~lT 95 (155)
T 2h09_A 53 GEARQVDMAARL--------GVSQPTVA----KMLKRLATMGLIEMI---P--WRGVFLT 95 (155)
T ss_dssp SCCCHHHHHHHH--------TSCHHHHH----HHHHHHHHTTCEEEE---T--TTEEEEC
T ss_pred CCcCHHHHHHHh--------CcCHHHHH----HHHHHHHHCCCEEEe---c--CCceEEC
Confidence 445666777765 88855555 78889988 798874 1 2467766
No 262
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=30.21 E-value=17 Score=27.83 Aligned_cols=27 Identities=22% Similarity=-0.081 Sum_probs=21.2
Q ss_pred cccccCcCCcCceeeccC---CCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNASD---KVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~---~~~aiKFh~ 117 (188)
+...||.|.+|.||.|.. ..+|+|...
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~ 43 (269)
T 4hcu_A 14 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIR 43 (269)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEEEC
T ss_pred eeheecCCCccEEEEEEecCCCeEEEEEec
Confidence 447799999999999933 278888754
No 263
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=29.98 E-value=14 Score=30.39 Aligned_cols=28 Identities=25% Similarity=0.099 Sum_probs=21.8
Q ss_pred hcccccCcCCcCceeeccC----CCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD----KVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~----~~~aiKFh~ 117 (188)
.+...||.|.+|.||.|.+ ..+|+|.-.
T Consensus 28 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~ 59 (371)
T 2xrw_A 28 QNLKPIGSGAQGIVCAAYDAILERNVAIKKLS 59 (371)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEEE
T ss_pred eEeeeeEecCCEEEEEEEECCCCceEEEEEec
Confidence 4557899999999999932 279999753
No 264
>1u2w_A CADC repressor, cadmium efflux system accessory protein; LEAD, SOFT metal ION resistance, ARSR/SM family, DNA binding protein; 1.90A {Staphylococcus aureus} SCOP: a.4.5.5 PDB: 3f72_A
Probab=29.96 E-value=26 Score=25.24 Aligned_cols=58 Identities=21% Similarity=0.129 Sum_probs=36.0
Q ss_pred ccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccCCCccCCccceehh
Q 040944 13 KDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKDPALNSKKEGVSEE 88 (188)
Q Consensus 13 ~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~~~~~~~YeGY~Lt 88 (188)
+-.++||..+.. +.-.....|++.. |+|.+.+. +.|..|.. +||.+.. .+...-|+++
T Consensus 42 ~~rl~IL~~L~~----~~~~s~~eLa~~l--------~is~stvs----~~L~~L~~~Glv~~~~--~gr~~~y~l~ 100 (122)
T 1u2w_A 42 ENRAKITYALCQ----DEELCVCDIANIL--------GVTIANAS----HHLRTLYKQGVVNFRK--EGKLALYSLG 100 (122)
T ss_dssp HHHHHHHHHHHH----SSCEEHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEC------CCEEEES
T ss_pred HHHHHHHHHHHH----CCCcCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCCeEEEE--ECCEEEEEEC
Confidence 334567776642 2336777788876 99966666 68888887 7887641 3444557766
No 265
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=29.93 E-value=14 Score=31.45 Aligned_cols=28 Identities=21% Similarity=0.127 Sum_probs=22.3
Q ss_pred hcccccCcCCcCceeeccCC----CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASDK----VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~----~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.+. .+|+|..+
T Consensus 100 ~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~ 131 (429)
T 3kvw_A 100 EVLKVIGKGSFGQVVKAYDHKVHQHVALKMVR 131 (429)
T ss_dssp EEEEEEEESSSEEEEEEEETTTTEEEEEEEEC
T ss_pred EEEEEcccCccEEEEEEEECCCCcEEEEEEEC
Confidence 45678999999999999332 78999763
No 266
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=29.77 E-value=22 Score=27.52 Aligned_cols=27 Identities=19% Similarity=0.090 Sum_probs=20.4
Q ss_pred cccccCcCCcCceeecc----CCCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
+...||.|..|.||.|. +..+|+|...
T Consensus 7 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~ 37 (299)
T 2r3i_A 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIR 37 (299)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEC-
T ss_pred hhhhhccCCCeeEEEEEEcCCCceEEEEEee
Confidence 34678999999999993 3378888653
No 267
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=29.64 E-value=16 Score=30.10 Aligned_cols=27 Identities=19% Similarity=0.119 Sum_probs=21.4
Q ss_pred cccccCcCCcCceeeccCC----CeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNASDK----VGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~~----~~aiKFh~ 117 (188)
++..||.|.+|.||.|.+. .+|+|..+
T Consensus 26 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~ 56 (342)
T 2qr7_A 26 VKEDIGVGSYSVCKRCIHKATNMEFAVKIID 56 (342)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEE
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEE
Confidence 4578999999999999432 78999764
No 268
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=29.56 E-value=15 Score=28.30 Aligned_cols=28 Identities=14% Similarity=0.005 Sum_probs=21.8
Q ss_pred cccccCcCCcCceeecc----CCCeeEEeeeh
Q 040944 91 QNSEAGRGSEPDRHNAS----DKVGAIIFCEY 118 (188)
Q Consensus 91 lG~~IGVGKESDVYea~----~~~~aiKFh~~ 118 (188)
+...||.|..|.||.|. +..+|+|....
T Consensus 10 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~ 41 (284)
T 3kk8_A 10 VKEELGKGAFSVVRRCVHKTTGLEFAAKIINT 41 (284)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEG
T ss_pred hhhhhcCcCCeEEEEEEEcCCCceEEEEEeec
Confidence 45779999999999993 23889998643
No 269
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=29.52 E-value=19 Score=29.70 Aligned_cols=28 Identities=18% Similarity=0.157 Sum_probs=22.0
Q ss_pred hcccccCcCCcCceeecc----CCCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
.++.+||.|..|.||.|. +..+|+|...
T Consensus 97 ~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~ 128 (365)
T 2y7j_A 97 DPKDVIGRGVSSVVRRCVHRATGHEFAVKIME 128 (365)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEE
T ss_pred ccceEEecCCCEEEEEEEECCCCcEEEEEEEE
Confidence 345789999999999993 2389999753
No 270
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=29.50 E-value=20 Score=29.67 Aligned_cols=27 Identities=22% Similarity=0.083 Sum_probs=15.4
Q ss_pred hcccccCcCCcCceeeccC----CCeeEEee
Q 040944 90 QQNSEAGRGSEPDRHNASD----KVGAIIFC 116 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~----~~~aiKFh 116 (188)
.+...||.|.+|.||.|.+ ..+|+|..
T Consensus 28 ~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~ 58 (367)
T 1cm8_A 28 RDLQPVGSGAYGAVCSAVDGRTGAKVAIKKL 58 (367)
T ss_dssp EEEEEC------CEEEEEETTTCCEEEEEEC
T ss_pred EEeEEeeecCCeEEEEEEECCCCCEEEEEEe
Confidence 3457899999999999932 37999964
No 271
>1uly_A Hypothetical protein PH1932; helix-turn-helix, structural genomics, DNA binding protein; 2.50A {Pyrococcus horikoshii} SCOP: a.4.5.58 PDB: 2cwe_A
Probab=29.49 E-value=15 Score=29.20 Aligned_cols=54 Identities=15% Similarity=0.250 Sum_probs=39.7
Q ss_pred hHHhcc-cCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 5 VDVLRY-LSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 5 ae~~r~-L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
++.++. +++.+++||..+.. .-++...|++.. |+|...+. +.+++|.+ ++|.+.
T Consensus 11 ~~~~k~l~d~~~~~IL~~L~~-----~~~s~~eLA~~l--------glS~stv~----~~l~~Le~~GlI~~~ 66 (192)
T 1uly_A 11 PEVIKVMLEDTRRKILKLLRN-----KEMTISQLSEIL--------GKTPQTIY----HHIEKLKEAGLVEVK 66 (192)
T ss_dssp HHHHHHHHSHHHHHHHHHHTT-----CCBCHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEE
T ss_pred HHHHHHhCCHHHHHHHHHHHc-----CCCCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCCEEEE
Confidence 344444 46888999999852 237888898887 99955555 78889988 788873
No 272
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=29.34 E-value=13 Score=28.91 Aligned_cols=27 Identities=22% Similarity=0.096 Sum_probs=21.1
Q ss_pred hcccccCcCCcCceeeccCC----CeeEEee
Q 040944 90 QQNSEAGRGSEPDRHNASDK----VGAIIFC 116 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~----~~aiKFh 116 (188)
.++..||.|.+|.||.|.+. .+|+|.-
T Consensus 18 ~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~ 48 (294)
T 2rku_A 18 VRGRFLGKGGFAKCFEISDADTKEVFAGKIV 48 (294)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEE
T ss_pred EEEEEEeecCCEEEEEEEECCCCceEEEEEe
Confidence 35678999999999999432 6888864
No 273
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=29.30 E-value=16 Score=29.62 Aligned_cols=27 Identities=26% Similarity=0.146 Sum_probs=21.0
Q ss_pred cccccCcCCcCceeeccCC----CeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNASDK----VGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~~----~~aiKFh~ 117 (188)
++..||.|.+|.||.|.+. .+|+|...
T Consensus 14 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~ 44 (346)
T 1ua2_A 14 KLDFLGEGQFATVYKARDKNTNQIVAIKKIK 44 (346)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC-
T ss_pred EEeEEeecCCEEEEEEEECCCCcEEEEEEEe
Confidence 5578999999999999432 78998754
No 274
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=29.25 E-value=15 Score=28.96 Aligned_cols=26 Identities=12% Similarity=0.023 Sum_probs=20.9
Q ss_pred ccccCcCCcCceeeccC----CCeeEEeee
Q 040944 92 NSEAGRGSEPDRHNASD----KVGAIIFCE 117 (188)
Q Consensus 92 G~~IGVGKESDVYea~~----~~~aiKFh~ 117 (188)
+..||.|..|.||.|.+ ..+|+|.-+
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~ 52 (299)
T 3m2w_A 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQ 52 (299)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEE
T ss_pred CcccccCCCeEEEEEEEcCCCcEEEEEEec
Confidence 46699999999999933 278999764
No 275
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=29.24 E-value=16 Score=28.25 Aligned_cols=29 Identities=21% Similarity=0.125 Sum_probs=21.9
Q ss_pred hcccccCcCCcCceeecc---CC----CeeEEeeeh
Q 040944 90 QQNSEAGRGSEPDRHNAS---DK----VGAIIFCEY 118 (188)
Q Consensus 90 alG~~IGVGKESDVYea~---~~----~~aiKFh~~ 118 (188)
.++..||.|.+|.||.|. .. .+|+|....
T Consensus 15 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~ 50 (281)
T 3cc6_A 15 VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKK 50 (281)
T ss_dssp EEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCT
T ss_pred EEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccc
Confidence 456789999999999983 21 389997653
No 276
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=29.18 E-value=16 Score=28.93 Aligned_cols=28 Identities=18% Similarity=0.092 Sum_probs=21.1
Q ss_pred hcccccCcCCcCceeeccCC-------CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASDK-------VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~-------~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.+. .+|+|..+
T Consensus 26 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~ 60 (323)
T 3qup_A 26 TLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLK 60 (323)
T ss_dssp EEEEEEEEETTEEEEEEEC-------CEEEEEEC-
T ss_pred EEeceecccCCeEEEEEEEcccCCcceeEEEEEec
Confidence 35678999999999999433 47899764
No 277
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=29.14 E-value=24 Score=28.89 Aligned_cols=28 Identities=18% Similarity=0.146 Sum_probs=21.9
Q ss_pred hcccccCcCCcCceeecc----CCCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
.+...||.|.+|.||.|. +..+|+|...
T Consensus 18 ~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~ 49 (328)
T 3fe3_A 18 RLLKTIGKGNFAKVKLARHILTGREVAIKIID 49 (328)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEE
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEE
Confidence 345789999999999993 2389999754
No 278
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=28.94 E-value=26 Score=29.21 Aligned_cols=27 Identities=15% Similarity=0.006 Sum_probs=16.4
Q ss_pred ccccCcCCcCceeecc----CCCeeEEeeeh
Q 040944 92 NSEAGRGSEPDRHNAS----DKVGAIIFCEY 118 (188)
Q Consensus 92 G~~IGVGKESDVYea~----~~~~aiKFh~~ 118 (188)
+..||.|.+|.||.|. +..+|+|..+.
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~ 124 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKT 124 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEEC
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcc
Confidence 4579999999999983 23899998654
No 279
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=28.87 E-value=18 Score=29.37 Aligned_cols=25 Identities=12% Similarity=0.054 Sum_probs=20.0
Q ss_pred ccccCcCCcCceeecc----CCCeeEEee
Q 040944 92 NSEAGRGSEPDRHNAS----DKVGAIIFC 116 (188)
Q Consensus 92 G~~IGVGKESDVYea~----~~~~aiKFh 116 (188)
+..||.|.+|.||.|. +..+|+|..
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~ 62 (336)
T 3fhr_A 34 KQVLGLGVNGKVLECFHRRTGQKCALKLL 62 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEE
T ss_pred ceeeeeCCCeEEEEEEECCCCCEEEEEEe
Confidence 4569999999999993 338999974
No 280
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=28.79 E-value=16 Score=31.79 Aligned_cols=28 Identities=25% Similarity=0.062 Sum_probs=22.2
Q ss_pred hcccccCcCCcCceeeccCC----CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASDK----VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~----~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.+. .+|+|...
T Consensus 65 ~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~ 96 (464)
T 3ttj_A 65 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS 96 (464)
T ss_dssp EEEEEEEECSSCEEEEEEETTTTEEEEEEEEE
T ss_pred EEEEEeecCCCeEEEEEEECCCCCEEEEEEEC
Confidence 45688999999999999332 78999753
No 281
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=28.60 E-value=25 Score=28.08 Aligned_cols=26 Identities=19% Similarity=0.087 Sum_probs=20.5
Q ss_pred cccccCcCCcCceeeccC----CCeeEEee
Q 040944 91 QNSEAGRGSEPDRHNASD----KVGAIIFC 116 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~----~~~aiKFh 116 (188)
+...||.|..|.||.|.+ ..+|+|.-
T Consensus 29 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~ 58 (331)
T 4aaa_A 29 NLGLVGEGSYGMVMKCRNKDTGRIVAIKKF 58 (331)
T ss_dssp EEEEGGGGTTSSEEEEEETTTCCEEEEEEE
T ss_pred eeeEEeecCCEEEEEEEECCCCceEEEEEE
Confidence 457899999999999933 37899854
No 282
>2yu3_A DNA-directed RNA polymerase III 39 kDa polypeptide F variant; winged helix domain, RNA polymerase III C39 subunit, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.54 E-value=14 Score=27.15 Aligned_cols=57 Identities=11% Similarity=0.074 Sum_probs=41.2
Q ss_pred hHHhcccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 5 VDVLRYLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 5 ae~~r~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
+..+..|+.+++.|+..||..=.. =+....|...+ +|+...+. ++|.+|+. +||++-
T Consensus 29 a~k~~~Lt~~E~lVy~~I~~aGn~--GIw~kdL~~~t--------nL~~~~vt----kiLK~LE~k~lIK~V 86 (95)
T 2yu3_A 29 AGKMKGSDNQEKLVYQIIEDAGNK--GIWSRDVRYKS--------NLPLTEIN----KILKNLESKKLIKAV 86 (95)
T ss_dssp CCCCCSCSHHHHHHHHHHHHHTTS--CEEHHHHHHHH--------TCCHHHHH----HHHHHHHHHTSEEEE
T ss_pred HhhhcCCCHHHHHHHHHHHHhCCC--CCCHHHHHHHh--------CCCHHHHH----HHHHHHHhCCCEEEe
Confidence 455778999999999999873222 23355677776 88844444 79999998 698874
No 283
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=28.38 E-value=19 Score=30.52 Aligned_cols=27 Identities=22% Similarity=0.025 Sum_probs=21.4
Q ss_pred hcccccCcCCcCceeeccC----CCeeEEee
Q 040944 90 QQNSEAGRGSEPDRHNASD----KVGAIIFC 116 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~----~~~aiKFh 116 (188)
.++..||.|.+|.||.|.+ ..+|+|..
T Consensus 57 ~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~ 87 (420)
T 1j1b_A 57 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKV 87 (420)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEE
T ss_pred EeeeEEeeCCCEEEEEEEECCCCcEEEEEEe
Confidence 4567899999999999933 37899854
No 284
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=28.30 E-value=26 Score=28.24 Aligned_cols=27 Identities=26% Similarity=0.124 Sum_probs=20.9
Q ss_pred cccccCcCCcCceeeccC----CCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNASD----KVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~----~~~aiKFh~ 117 (188)
+...||.|.+|.||.|.+ ..+|+|...
T Consensus 37 ~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~ 67 (360)
T 3eqc_A 37 KISELGAGNGGVVFKVSHKPSGLVMARKLIH 67 (360)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEE
T ss_pred eeeeecCCCCeEEEEEEECCCCcEEEEEEec
Confidence 346789999999999933 378898764
No 285
>2f2e_A PA1607; transcription factor, helix-TRUN-helix, APC5613, structural genomics, PSI, protein structure initiative; HET: GLC; 1.85A {Pseudomonas aeruginosa} SCOP: a.4.5.69
Probab=28.28 E-value=31 Score=25.75 Aligned_cols=55 Identities=13% Similarity=0.131 Sum_probs=34.6
Q ss_pred hHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccCCCccCCccceehh
Q 040944 17 KVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKDPALNSKKEGVSEE 88 (188)
Q Consensus 17 RVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~~~~~~~YeGY~Lt 88 (188)
.||..+..|- .....|.+.. |++...+. +.|++|++ +||.|..-...+...|+||
T Consensus 28 ~IL~~L~~g~-----~~~~eLa~~l--------gis~~tls----~~L~~Le~~GlI~r~~~~~d~~~~y~LT 83 (146)
T 2f2e_A 28 LIVRDAFEGL-----TRFGEFQKSL--------GLAKNILA----ARLRNLVEHGVMVAVPAESGSHQEYRLT 83 (146)
T ss_dssp HHHHHHHTTC-----CSHHHHHHHH--------CCCHHHHH----HHHHHHHHTTSEEEEECSSSSCEEEEEC
T ss_pred HHHHHHHhCC-----CCHHHHHHHh--------CCCHHHHH----HHHHHHHHCCCEEEEecCCCCeEEEEEC
Confidence 3677775442 3455666665 88855666 68999988 7998752001114578887
No 286
>1xd7_A YWNA; structural genomics, protein structure initiative, winged HE binding, hypothetical protein, PSI; 2.30A {Bacillus subtilis subsp} SCOP: a.4.5.55
Probab=28.22 E-value=34 Score=25.42 Aligned_cols=57 Identities=12% Similarity=0.029 Sum_probs=39.6
Q ss_pred chhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccCCCccCCccceehhhhcccccCcCCcCceeeccCC
Q 040944 33 PFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKDPALNSKKEGVSEENQQNSEAGRGSEPDRHNASDK 109 (188)
Q Consensus 33 P~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~~~~~~~YeGY~Lt~alG~~IGVGKESDVYea~~~ 109 (188)
+.+.|++.. ++|..-+. +.+.+|.+ +||... .+ .-||+|.... ..|-+ .|||.+..+
T Consensus 25 s~~~IA~~~--------~i~~~~l~----kIl~~L~~aGlv~s~---rG-~GGy~Lar~p-~~Itl---~dVi~aveg 82 (145)
T 1xd7_A 25 SSEIIADSV--------NTNPVVVR----RMISLLKKADILTSR---AG-VPGASLKKDP-ADISL---LEVYRAVQK 82 (145)
T ss_dssp CHHHHHHHH--------TSCHHHHH----HHHHHHHHTTSEECC---SS-SSSCEESSCG-GGCBH---HHHHHHHCC
T ss_pred CHHHHHHHH--------CcCHHHHH----HHHHHHHHCCceEee---cC-CCCceecCCH-HHCCH---HHHHHHHcC
Confidence 888888886 88844443 79999999 798864 45 6789988333 22333 478888665
No 287
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=28.10 E-value=25 Score=29.27 Aligned_cols=28 Identities=14% Similarity=-0.020 Sum_probs=21.5
Q ss_pred hcccccCcCCcCceeeccC-------CCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD-------KVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~-------~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.. ..+|+|..+
T Consensus 48 ~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~ 82 (373)
T 2qol_A 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82 (373)
T ss_dssp CCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECC
T ss_pred eeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEec
Confidence 3567899999999999932 168999765
No 288
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=28.07 E-value=13 Score=29.36 Aligned_cols=26 Identities=23% Similarity=0.019 Sum_probs=20.7
Q ss_pred cccccCcCCcCceeeccC----CCeeEEee
Q 040944 91 QNSEAGRGSEPDRHNASD----KVGAIIFC 116 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~----~~~aiKFh 116 (188)
+...||.|.+|.||.|.+ ..+|+|..
T Consensus 15 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~ 44 (294)
T 4eqm_A 15 IVDKLGGGGMSTVYLAEDTILNIKVAIKAI 44 (294)
T ss_dssp EEEEEEEETTEEEEEEEETTTCSEEEEEEE
T ss_pred EEEEEccCCCEEEEEEEECCCCCeEEEEEe
Confidence 457899999999999932 27899964
No 289
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=27.76 E-value=23 Score=30.61 Aligned_cols=27 Identities=15% Similarity=0.121 Sum_probs=19.5
Q ss_pred cccccCcCCcCceeeccC----CCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNASD----KVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~----~~~aiKFh~ 117 (188)
++..||.|.+|.||.|.+ ..+|+|.-+
T Consensus 40 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~ 70 (504)
T 3q5i_A 40 KVRKLGSGAYGEVLLCKEKNGHSEKAIKVIK 70 (504)
T ss_dssp EEEEEEC--CEEEEEEEETTTCCEEEEEEEE
T ss_pred EEeEecccCCeEEEEEEECCCCcEEEEEEEE
Confidence 457899999999999932 278999854
No 290
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=27.52 E-value=20 Score=28.93 Aligned_cols=26 Identities=19% Similarity=0.118 Sum_probs=21.0
Q ss_pred ccccCcCCcCceeecc----CCCeeEEeee
Q 040944 92 NSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 92 G~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
..+||.|.+|.||.|. +..+|+|...
T Consensus 50 ~~~lg~G~~g~V~~a~~~~~g~~vavK~~~ 79 (321)
T 2c30_A 50 YVKIGEGSTGIVCLAREKHSGRQVAVKMMD 79 (321)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEE
T ss_pred cEEeccCCCeEEEEEEECCCCcEEEEEEEe
Confidence 4589999999999992 3389999754
No 291
>1y0u_A Arsenical resistance operon repressor, putative; structural genomics, protein structure initiative, PSI; HET: MSE; 1.60A {Archaeoglobus fulgidus} SCOP: a.4.5.5
Probab=27.45 E-value=20 Score=24.42 Aligned_cols=52 Identities=8% Similarity=-0.155 Sum_probs=35.5
Q ss_pred ccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccCCCccCCccceehh
Q 040944 13 KDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKDPALNSKKEGVSEE 88 (188)
Q Consensus 13 ~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~~~~~~~YeGY~Lt 88 (188)
+..++||..| .| -+....|++.. |+|...+. +.|..|.. +||.+. . + .|+++
T Consensus 31 ~~r~~Il~~L-~~-----~~~~~eLa~~l--------~is~~tv~----~~L~~L~~~Glv~~~---~-g--~y~l~ 83 (96)
T 1y0u_A 31 PVRRKILRML-DK-----GRSEEEIMQTL--------SLSKKQLD----YHLKVLEAGFCIERV---G-E--RWVVT 83 (96)
T ss_dssp HHHHHHHHHH-HT-----TCCHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEE---T-T--EEEEC
T ss_pred HHHHHHHHHH-cC-----CCCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCCEEEE---C-C--EEEEC
Confidence 4456788888 32 25666777775 88855555 68888888 799885 2 2 67776
No 292
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=27.34 E-value=25 Score=28.45 Aligned_cols=28 Identities=11% Similarity=-0.179 Sum_probs=15.7
Q ss_pred hcccccCcCCcCceeeccC-------CCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD-------KVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~-------~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.+ ..+|+|...
T Consensus 40 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~ 74 (345)
T 2v62_A 40 VLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEY 74 (345)
T ss_dssp EEEEEC------CEEEEEESSSCGGGCCEEEEEEE
T ss_pred EEEeeEeecCCeEEEEEEecCCCCccceEEEEeee
Confidence 4568899999999999933 267888654
No 293
>2d1h_A ST1889, 109AA long hypothetical transcriptional regulator; helix-turn-helix, intermolecular and intramolecular S-S bond structural genomics; 2.05A {Sulfolobus tokodaii} SCOP: a.4.5.50
Probab=27.34 E-value=24 Score=23.38 Aligned_cols=52 Identities=10% Similarity=0.107 Sum_probs=38.2
Q ss_pred cccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 9 RYLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 9 r~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
..|++..+++|..+-. .+.-+....|++.. |++...+. +.+++|.. ++|.+.
T Consensus 17 ~~l~~~~~~~l~~l~~---~~~~~t~~ela~~l--------~is~~tv~----~~l~~L~~~g~v~~~ 69 (109)
T 2d1h_A 17 YKITDTDVAVLLKMVE---IEKPITSEELADIF--------KLSKTTVE----NSLKKLIELGLVVRT 69 (109)
T ss_dssp HTCCHHHHHHHHHHHH---HCSCEEHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEE
T ss_pred hcCCHHHHHHHHHHHH---cCCCCCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCCeEee
Confidence 4678888888877643 24457888888886 99855555 78888888 788874
No 294
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=27.26 E-value=22 Score=29.48 Aligned_cols=28 Identities=14% Similarity=0.038 Sum_probs=22.2
Q ss_pred hcccccCcCCcCceeecc----CCCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|. +..+|+|...
T Consensus 32 ~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~ 63 (362)
T 2bdw_A 32 DVKEELGKGAFSVVRRCVHKTTGLEFAAKIIN 63 (362)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEE
T ss_pred EEeeEEecCCCeEEEEEEECCCCCEEEEEEEE
Confidence 456789999999999993 2378999864
No 295
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=27.18 E-value=29 Score=26.53 Aligned_cols=28 Identities=18% Similarity=0.062 Sum_probs=21.5
Q ss_pred cccccCcCCcCceeeccC----CCeeEEeeeh
Q 040944 91 QNSEAGRGSEPDRHNASD----KVGAIIFCEY 118 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~----~~~aiKFh~~ 118 (188)
+...||.|.+|.||.|.+ ..+|+|....
T Consensus 10 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~ 41 (279)
T 2w5a_A 10 VLYTIGTGSYGRCQKIRRKSDGKILVWKELDY 41 (279)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEEC
T ss_pred eehhccCCCCcEEEEEEECCCCcEEEEEEEEc
Confidence 457789999999999932 3788887653
No 296
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=27.12 E-value=19 Score=28.24 Aligned_cols=28 Identities=14% Similarity=-0.038 Sum_probs=19.9
Q ss_pred hcccccCcCCcCceeeccCC-------CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASDK-------VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~-------~~aiKFh~ 117 (188)
.++..||.|.+|.||.|... .+|+|.-+
T Consensus 37 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~ 71 (313)
T 3brb_A 37 ILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMK 71 (313)
T ss_dssp EEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC-
T ss_pred eeccceeecCCeEEEEEEEeccCCceeEEEEEEEe
Confidence 36688999999999988221 58898754
No 297
>2k4b_A Transcriptional regulator; DNA binding protein, winged helix; NMR {Lactococcus lactis subsp}
Probab=27.10 E-value=25 Score=25.28 Aligned_cols=55 Identities=7% Similarity=0.061 Sum_probs=36.2
Q ss_pred cccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 9 RYLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 9 r~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
..|++.+|.||..|-. .+=+....|.+.. ..+.+++...+. ..|++|++ +||.|.
T Consensus 31 ~~LT~~e~~VL~~L~~----~~~~t~~eL~~~l----~~~~~~s~sTVt----~~L~rLe~KGlV~R~ 86 (99)
T 2k4b_A 31 FNVSNAELIVMRVIWS----LGEARVDEIYAQI----PQELEWSLATVK----TLLGRLVKKEMLSTE 86 (99)
T ss_dssp CCCCCSCSHHHHHHHH----HSCEEHHHHHHTC----CGGGCCCHHHHH----HHHHHHHHTTSCEEE
T ss_pred CCCCHHHHHHHHHHHh----CCCCCHHHHHHHH----hcccCCCHhhHH----HHHHHHHHCCCEEEE
Confidence 3589999999999864 2235666666653 011234433344 78999999 699884
No 298
>2qvo_A Uncharacterized protein AF_1382; PSI, structural genomics, southeast collaboratory for structural genomics; 1.85A {Archaeoglobus fulgidus dsm 4304} PDB: 3o3k_A 3ov8_A
Probab=27.05 E-value=21 Score=24.40 Aligned_cols=52 Identities=13% Similarity=0.087 Sum_probs=36.8
Q ss_pred ccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccc
Q 040944 10 YLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIH 73 (188)
Q Consensus 10 ~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~ 73 (188)
.|+...+.+|..+-......+.+....|++.. +++.+.+. +.+++|++ +||.
T Consensus 9 ~l~~~~~~iL~~l~~~~~~~~~~t~~eLa~~l--------~i~~~tvs----~~l~~Le~~Glv~ 61 (95)
T 2qvo_A 9 LFKEKALEILMTIYYESLGGNDVYIQYIASKV--------NSPHSYVW----LIIKKFEEAKMVE 61 (95)
T ss_dssp HSCHHHHHHHHHHHHHHHTTCCEEHHHHHHHS--------SSCHHHHH----HHHHHHHHTTSEE
T ss_pred CCchhHHHHHHHHHHccCCCCCcCHHHHHHHH--------CcCHHHHH----HHHHHHHHCcCcc
Confidence 46777888888875432222346777788876 88866666 78999998 6883
No 299
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=26.85 E-value=19 Score=28.69 Aligned_cols=28 Identities=11% Similarity=0.026 Sum_probs=20.9
Q ss_pred hcccccCcCCcCceeec----c---CC-CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNA----S---DK-VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea----~---~~-~~aiKFh~ 117 (188)
.+...||.|.+|.||.+ . ++ .+|+|.-+
T Consensus 34 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~ 69 (318)
T 3lxp_A 34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALK 69 (318)
T ss_dssp EEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEEC
T ss_pred hhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEec
Confidence 45678999999999765 1 22 78999764
No 300
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=26.77 E-value=24 Score=28.14 Aligned_cols=28 Identities=14% Similarity=0.052 Sum_probs=21.7
Q ss_pred hcccccCcCCcCceeecc-------CC-CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNAS-------DK-VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~-------~~-~~aiKFh~ 117 (188)
.++..||.|.+|.||.|. ++ .+|+|...
T Consensus 44 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~ 79 (326)
T 2w1i_A 44 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ 79 (326)
T ss_dssp EEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEES
T ss_pred eeeeeeccCCCeEEEEEEeccccCCCceEEEEEEec
Confidence 356789999999999984 22 78898753
No 301
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=26.72 E-value=20 Score=31.20 Aligned_cols=29 Identities=10% Similarity=-0.065 Sum_probs=23.0
Q ss_pred hhcccccCcCCcCceeeccC----CCeeEEeee
Q 040944 89 NQQNSEAGRGSEPDRHNASD----KVGAIIFCE 117 (188)
Q Consensus 89 ~alG~~IGVGKESDVYea~~----~~~aiKFh~ 117 (188)
-.++..||.|.+|.||.|.. ..+|+|..+
T Consensus 222 ~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~ 254 (495)
T 1opk_A 222 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK 254 (495)
T ss_dssp EEEEEESGGGTTSSEEEEEEGGGTEEEEEEECC
T ss_pred ceeeeEecCCCCeEEEEEEEcCCCeEEEEEEec
Confidence 35668899999999999932 379999764
No 302
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=26.60 E-value=16 Score=30.24 Aligned_cols=28 Identities=14% Similarity=0.013 Sum_probs=22.1
Q ss_pred hcccccCcCCcCceeeccC-----------CCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD-----------KVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~-----------~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.+ ..+|+|.-+
T Consensus 72 ~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~ 110 (382)
T 3tt0_A 72 VLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK 110 (382)
T ss_dssp EEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEEC
T ss_pred EeeeEEecCCCeEEEEEEEccccccccccceEEEEEeec
Confidence 5678899999999999842 158898754
No 303
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=26.50 E-value=25 Score=27.07 Aligned_cols=25 Identities=20% Similarity=-0.004 Sum_probs=19.8
Q ss_pred cccCcCCcCceeeccC---C-CeeEEeee
Q 040944 93 SEAGRGSEPDRHNASD---K-VGAIIFCE 117 (188)
Q Consensus 93 ~~IGVGKESDVYea~~---~-~~aiKFh~ 117 (188)
..||.|.+|.||.|.+ + .+|+|...
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~ 56 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIP 56 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEE
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEcc
Confidence 4799999999999943 2 78898653
No 304
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=26.43 E-value=23 Score=29.52 Aligned_cols=28 Identities=21% Similarity=-0.022 Sum_probs=22.1
Q ss_pred cccccCcCCcCceeeccC---C-CeeEEeeeh
Q 040944 91 QNSEAGRGSEPDRHNASD---K-VGAIIFCEY 118 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~---~-~~aiKFh~~ 118 (188)
++..||.|.+|.||.|.. + .+|+|..+.
T Consensus 21 ~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~ 52 (345)
T 1xjd_A 21 LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKK 52 (345)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEEEEH
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEh
Confidence 457899999999999932 2 789997653
No 305
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=26.32 E-value=16 Score=29.45 Aligned_cols=27 Identities=22% Similarity=0.096 Sum_probs=21.2
Q ss_pred hcccccCcCCcCceeeccCC----CeeEEee
Q 040944 90 QQNSEAGRGSEPDRHNASDK----VGAIIFC 116 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~----~~aiKFh 116 (188)
.++..||.|.+|.||.|.+. .+|+|.-
T Consensus 44 ~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~ 74 (335)
T 2owb_A 44 VRGRFLGKGGFAKCFEISDADTKEVFAGKIV 74 (335)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEE
T ss_pred EEEEEEeeCCCeEEEEEEECCCCCEEEEEEe
Confidence 35678999999999999432 6888874
No 306
>2obp_A Putative DNA-binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.70A {Ralstonia eutropha} SCOP: a.4.5.71
Probab=26.31 E-value=33 Score=25.04 Aligned_cols=52 Identities=10% Similarity=0.122 Sum_probs=37.0
Q ss_pred cCccchhHHHHHHhhccC---CcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 11 LSKDDFKVLTAVETGMRN---HEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 11 L~~~DfRVL~AIE~GMRn---hE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
|++-.|-+|..+-..-+. ..| ....|++.+ +++..-+. +.+.+|++ +||.+.
T Consensus 14 l~~~q~~vL~~L~~~~~~~~g~~~-s~~eLa~~l--------~l~~stLs----R~l~rLe~~GLV~r~ 69 (96)
T 2obp_A 14 IDPAIVEVLLVLREAGIENGATPW-SLPKIAKRA--------QLPMSVLR----RVLTQLQAAGLADVS 69 (96)
T ss_dssp CCHHHHHHHHHHHHHTSSTTCCCC-BHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEE
T ss_pred CCHHHHHHHHHHHHHHhhCCCCCc-CHHHHHHHh--------CCchhhHH----HHHHHHHHCCCEEee
Confidence 778889999987544222 345 777788876 77733333 89999999 799984
No 307
>2jsc_A Transcriptional regulator RV1994C/MT2050; cadmium, transcriptional repressor, solution structure, STRU genomics; NMR {Mycobacterium tuberculosis}
Probab=26.20 E-value=29 Score=24.79 Aligned_cols=63 Identities=14% Similarity=0.136 Sum_probs=39.7
Q ss_pred HhcccC-ccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccCCCccCCccc
Q 040944 7 VLRYLS-KDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKDPALNSKKEG 84 (188)
Q Consensus 7 ~~r~L~-~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~~~~~~~YeG 84 (188)
.++.|. +-.++||..+..| + .....|++.. |+|...+. +.|..|.. +||.+.. .+...-
T Consensus 14 ~~~aL~~~~r~~IL~~L~~~----~-~~~~eLa~~l--------gis~stvs----~~L~~L~~~GlV~~~~--~gr~~~ 74 (118)
T 2jsc_A 14 LGRALADPTRCRILVALLDG----V-CYPGQLAAHL--------GLTRSNVS----NHLSCLRGCGLVVATY--EGRQVR 74 (118)
T ss_dssp HHHHHSSHHHHHHHHHHHTT----C-CSTTTHHHHH--------SSCHHHHH----HHHHHHTTTTSEEEEE--CSSSEE
T ss_pred HHHHhCCHHHHHHHHHHHcC----C-CCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCceEEEE--ECCEEE
Confidence 344443 4467788887643 2 4556677775 89855555 68888888 7887641 344445
Q ss_pred eehh
Q 040944 85 VSEE 88 (188)
Q Consensus 85 Y~Lt 88 (188)
|+++
T Consensus 75 y~l~ 78 (118)
T 2jsc_A 75 YALA 78 (118)
T ss_dssp EEES
T ss_pred EEEC
Confidence 7766
No 308
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=26.17 E-value=29 Score=29.79 Aligned_cols=27 Identities=19% Similarity=0.113 Sum_probs=21.9
Q ss_pred hcccccCcCCcCceeeccC----CCeeEEee
Q 040944 90 QQNSEAGRGSEPDRHNASD----KVGAIIFC 116 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~----~~~aiKFh 116 (188)
.+...||.|.+|.||.|.+ ..+|+|.-
T Consensus 25 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~ 55 (486)
T 3mwu_A 25 NIVCMLGKGSFGEVLKCKDRITQQEYAVKVI 55 (486)
T ss_dssp EEEEEEECCSSSEEEEEEETTTCCEEEEEEE
T ss_pred EEeEEEeecCCEEEEEEEECCCCCEEEEEEE
Confidence 4568899999999999932 37899975
No 309
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=25.80 E-value=18 Score=27.41 Aligned_cols=27 Identities=26% Similarity=-0.048 Sum_probs=21.1
Q ss_pred cccccCcCCcCceeeccC--C-CeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNASD--K-VGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~--~-~~aiKFh~ 117 (188)
+...||.|.+|.||.|.. + .+|+|...
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~ 41 (267)
T 3t9t_A 12 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIR 41 (267)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEEC
T ss_pred eeeEecCCCceeEEEEEecCCCeEEEEEcc
Confidence 457789999999999933 2 78888754
No 310
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=25.71 E-value=23 Score=28.07 Aligned_cols=28 Identities=18% Similarity=0.061 Sum_probs=21.7
Q ss_pred hcccccCcCCcCceeeccCC---------CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASDK---------VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~---------~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.+. .+|+|...
T Consensus 49 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~ 85 (333)
T 2i1m_A 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK 85 (333)
T ss_dssp EEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEEC
T ss_pred eeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcc
Confidence 45688999999999999421 48888754
No 311
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=25.71 E-value=17 Score=28.28 Aligned_cols=28 Identities=18% Similarity=0.120 Sum_probs=21.9
Q ss_pred hcccccCcCCcCceeeccC----CCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD----KVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~----~~~aiKFh~ 117 (188)
.++..||.|..|.||.|.+ ..+|+|...
T Consensus 25 ~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~ 56 (287)
T 2wei_A 25 NIVCMLGKGSFGEVLKCKDRITQQEYAVKVIN 56 (287)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEE
T ss_pred eeeEEEcCCCCEEEEEEEEcCCCcEEEEEEec
Confidence 4567899999999999933 378998753
No 312
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=25.61 E-value=16 Score=28.46 Aligned_cols=28 Identities=14% Similarity=0.074 Sum_probs=22.1
Q ss_pred hcccccCcCCcCceeeccC---------CCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD---------KVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~---------~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.. ..+|+|.-.
T Consensus 26 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~ 62 (313)
T 1t46_A 26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK 62 (313)
T ss_dssp EEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEEC
T ss_pred hHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcC
Confidence 4668899999999999842 278888754
No 313
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=25.59 E-value=29 Score=27.97 Aligned_cols=28 Identities=14% Similarity=0.032 Sum_probs=21.8
Q ss_pred hcccccCcCCcCceeeccCC-------CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASDK-------VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~-------~~aiKFh~ 117 (188)
.++..||.|.+|.||.|... .+|+|..+
T Consensus 52 ~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~ 86 (325)
T 3kul_A 52 HIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALK 86 (325)
T ss_dssp EEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEEC
T ss_pred EEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecC
Confidence 45678999999999999431 38999765
No 314
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=25.57 E-value=25 Score=29.87 Aligned_cols=28 Identities=11% Similarity=-0.001 Sum_probs=21.8
Q ss_pred hcccccCcCCcCceeecc----CCCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
.+...||.|.+|.||.|. +..+|+|..+
T Consensus 151 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~ 182 (446)
T 4ejn_A 151 EYLKLLGKGTFGKVILVKEKATGRYYAMKILK 182 (446)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEE
T ss_pred EEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEE
Confidence 345789999999999983 2379999754
No 315
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=25.49 E-value=19 Score=27.61 Aligned_cols=27 Identities=26% Similarity=0.115 Sum_probs=20.1
Q ss_pred cccccCcCCcCceeeccCC----CeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNASDK----VGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~~----~~aiKFh~ 117 (188)
+...||.|.+|.||.|.+. .+|+|...
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~ 43 (277)
T 3f3z_A 13 LENTIGRGSWGEVKIAVQKGTRIRRAAKKIP 43 (277)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEE
T ss_pred eeeEEeecCCEEEEEEEeCCCCcEEEEEeeh
Confidence 4578999999999999332 56777543
No 316
>3jth_A Transcription activator HLYU; transcription factor, RTXA, DNA-binding, transcription regulation; 2.00A {Vibrio vulnificus}
Probab=25.15 E-value=21 Score=24.22 Aligned_cols=63 Identities=5% Similarity=0.129 Sum_probs=39.3
Q ss_pred HhcccC-ccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccCCCccCCccc
Q 040944 7 VLRYLS-KDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKDPALNSKKEG 84 (188)
Q Consensus 7 ~~r~L~-~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~~~~~~~YeG 84 (188)
.++.|. +-.++||..+.. .-+....|++.. |+|.+.+. +.|..|.. +||.+.. .+...-
T Consensus 16 ~~~~l~~~~r~~Il~~L~~-----~~~~~~ela~~l--------~is~~tvs----~~L~~L~~~Glv~~~~--~g~~~~ 76 (98)
T 3jth_A 16 LLKAMANERRLQILCMLHN-----QELSVGELCAKL--------QLSQSALS----QHLAWLRRDGLVTTRK--EAQTVY 76 (98)
T ss_dssp HHHHHCSHHHHHHHHHTTT-----SCEEHHHHHHHH--------TCCHHHHH----HHHHHHHHTTSEEEEC--CTTCCE
T ss_pred HHHHcCCHHHHHHHHHHhc-----CCCCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCCeEEEE--eCCEEE
Confidence 344443 445567776643 346777788876 99866555 68888888 7887641 343444
Q ss_pred eehh
Q 040944 85 VSEE 88 (188)
Q Consensus 85 Y~Lt 88 (188)
|+++
T Consensus 77 y~l~ 80 (98)
T 3jth_A 77 YTLK 80 (98)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 6655
No 317
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=25.08 E-value=27 Score=28.64 Aligned_cols=28 Identities=14% Similarity=0.042 Sum_probs=21.5
Q ss_pred hcccccCcCCcCceeeccC-------CCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD-------KVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~-------~~~aiKFh~ 117 (188)
.+...||.|.+|.||.|.. ..+|+|..+
T Consensus 57 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~ 91 (355)
T 1vzo_A 57 ELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLK 91 (355)
T ss_dssp EEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEES
T ss_pred EEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEe
Confidence 4557899999999998832 278998753
No 318
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=24.59 E-value=23 Score=29.25 Aligned_cols=27 Identities=19% Similarity=0.071 Sum_probs=21.4
Q ss_pred cccccCcCCcCceeeccC----CCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNASD----KVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~----~~~aiKFh~ 117 (188)
+...||.|.+|.||.|.. ..+|+|..+
T Consensus 13 ~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~ 43 (345)
T 3a8x_A 13 LLRVIGRGSYAKVLLVRLKKTDRIYAMKVVK 43 (345)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEE
T ss_pred EEEEEEecCCeEEEEEEECCCCCEEEEEEEE
Confidence 457799999999999932 278999865
No 319
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=24.56 E-value=33 Score=29.27 Aligned_cols=27 Identities=19% Similarity=0.133 Sum_probs=20.9
Q ss_pred cccccCcCCcCceeeccC----CCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNASD----KVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~----~~~aiKFh~ 117 (188)
+...||.|.+|.||.|.. ..+|+|.-.
T Consensus 19 i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~ 49 (384)
T 4fr4_A 19 ILRAIGKGSFGKVCIVQKNDTKKMYAMKYMN 49 (384)
T ss_dssp EEEEEECCTTCCEEEEEETTTCCEEEEEEEE
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEe
Confidence 457789999999999932 268999753
No 320
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=24.34 E-value=32 Score=27.35 Aligned_cols=27 Identities=11% Similarity=-0.059 Sum_probs=19.0
Q ss_pred hcccccCcCCcCceeeccCC---------CeeEEee
Q 040944 90 QQNSEAGRGSEPDRHNASDK---------VGAIIFC 116 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~---------~~aiKFh 116 (188)
.++..||.|.+|.||.|... .+|+|..
T Consensus 33 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~ 68 (327)
T 2yfx_A 33 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL 68 (327)
T ss_dssp EEEEECC--CSSCEEEEEC--------CCEEEEEEC
T ss_pred EEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEe
Confidence 35578999999999998521 5899975
No 321
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=24.34 E-value=30 Score=28.55 Aligned_cols=27 Identities=11% Similarity=-0.036 Sum_probs=21.3
Q ss_pred cccccCcCCcCceeecc----CCCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
+...||.|.+|.||.|. +..+|+|.-+
T Consensus 9 ~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~ 39 (337)
T 1o6l_A 9 YLKLLGKGTFGKVILVREKATGRYYAMKILR 39 (337)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEE
T ss_pred EEEEEecCCCeEEEEEEECCCCCEEEEEEEe
Confidence 44779999999999993 3378999764
No 322
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=24.33 E-value=25 Score=27.10 Aligned_cols=29 Identities=14% Similarity=0.042 Sum_probs=21.9
Q ss_pred hhcccccCcCCcCceeecc---CC----CeeEEeee
Q 040944 89 NQQNSEAGRGSEPDRHNAS---DK----VGAIIFCE 117 (188)
Q Consensus 89 ~alG~~IGVGKESDVYea~---~~----~~aiKFh~ 117 (188)
-.++..||.|.+|.||.|. +. .+|+|..+
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~ 58 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLS 58 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEET
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeecc
Confidence 3567889999999999983 22 47888643
No 323
>1qgp_A Protein (double stranded RNA adenosine deaminase); Z-alpha-Z-DNA binding domain, RNA-editing, Z-DNA recognition, ADAR1, helix- turn-helix; NMR {Homo sapiens} SCOP: a.4.5.19
Probab=24.04 E-value=49 Score=22.54 Aligned_cols=50 Identities=14% Similarity=0.167 Sum_probs=35.4
Q ss_pred ccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 13 KDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 13 ~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
+.|.+||..+...-. .+-++...|++.. |++...+. +.|++|.+ ++|.+.
T Consensus 14 ~~~~~IL~~L~~~~~-~~~~t~~eLA~~L--------gvs~~tV~----~~L~~L~~~G~I~~~ 64 (77)
T 1qgp_A 14 DQEQRILKFLEELGE-GKATTAHDLSGKL--------GTPKKEIN----RVLYSLAKKGKLQKE 64 (77)
T ss_dssp HHHHHHHHHHHHHCS-SSCEEHHHHHHHH--------CCCHHHHH----HHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHHHHcCC-CCCcCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCCEEec
Confidence 346888877765432 3457888888887 88844433 78999988 788874
No 324
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=23.81 E-value=35 Score=27.25 Aligned_cols=17 Identities=18% Similarity=0.126 Sum_probs=14.5
Q ss_pred cccccCcCCcCceeecc
Q 040944 91 QNSEAGRGSEPDRHNAS 107 (188)
Q Consensus 91 lG~~IGVGKESDVYea~ 107 (188)
+...||.|.+|.||.|.
T Consensus 17 ~~~~lG~G~~g~Vy~~~ 33 (325)
T 3kex_A 17 KLKVLGSGVFGTVHKGV 33 (325)
T ss_dssp EEEEEECCSSCEEEEEE
T ss_pred eeeeeeecCCceEEEEE
Confidence 45779999999999993
No 325
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=23.31 E-value=29 Score=29.44 Aligned_cols=27 Identities=22% Similarity=0.153 Sum_probs=21.1
Q ss_pred cccccCcCCcCceeecc----CCCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
+...||.|.+|.||.|. +..+|+|+..
T Consensus 55 i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~ 85 (387)
T 1kob_A 55 ILEELGSGAFGVVHRCVEKATGRVFVAKFIN 85 (387)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEE
T ss_pred EEEEEecCCCEEEEEEEECCCCCEEEEEEec
Confidence 45678999999999993 2378888864
No 326
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=23.07 E-value=17 Score=28.06 Aligned_cols=27 Identities=11% Similarity=0.115 Sum_probs=20.7
Q ss_pred cccccCcCCcCceeeccCC-----------CeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNASDK-----------VGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~~-----------~~aiKFh~ 117 (188)
++..||.|.+|.||.|.+. .+|+|...
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~ 49 (289)
T 4fvq_A 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLD 49 (289)
T ss_dssp EEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEEC
T ss_pred eeeeeccCCCceEEEEEEecccccccccchhhhhhhcc
Confidence 4577899999999999332 48888753
No 327
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=23.03 E-value=37 Score=28.10 Aligned_cols=27 Identities=15% Similarity=0.011 Sum_probs=21.4
Q ss_pred cccccCcCCcCceeecc----CCCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
+...||.|.+|.||.|. +..+|+|...
T Consensus 45 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~ 75 (350)
T 1rdq_E 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILD 75 (350)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEE
T ss_pred EEEEeecCcCcEEEEEEECCCCCEEEEEEEE
Confidence 44778999999999993 3389999864
No 328
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=23.00 E-value=31 Score=26.86 Aligned_cols=24 Identities=21% Similarity=0.138 Sum_probs=19.1
Q ss_pred ccCcCCcCceeecc--C----CCeeEEeee
Q 040944 94 EAGRGSEPDRHNAS--D----KVGAIIFCE 117 (188)
Q Consensus 94 ~IGVGKESDVYea~--~----~~~aiKFh~ 117 (188)
.||.|.+|.||.|. . ..+|+|..+
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~ 53 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILK 53 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeec
Confidence 79999999999992 2 268888754
No 329
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=22.87 E-value=22 Score=30.18 Aligned_cols=28 Identities=32% Similarity=0.048 Sum_probs=22.1
Q ss_pred hcccccCcCCcCceeeccCC----CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASDK----VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~----~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.+. .+|+|...
T Consensus 29 ~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~ 60 (432)
T 3n9x_A 29 IIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVN 60 (432)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTEEEEEEEEC
T ss_pred EEEEEEeecCCEEEEEEEECCCCcEEEEEEeC
Confidence 45678999999999999332 78999753
No 330
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=22.50 E-value=31 Score=29.12 Aligned_cols=26 Identities=15% Similarity=0.049 Sum_probs=20.7
Q ss_pred ccccCcCCcCceeeccCC----CeeEEeee
Q 040944 92 NSEAGRGSEPDRHNASDK----VGAIIFCE 117 (188)
Q Consensus 92 G~~IGVGKESDVYea~~~----~~aiKFh~ 117 (188)
+..||.|.+|.||.|.+. .+|+|..+
T Consensus 67 ~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~ 96 (400)
T 1nxk_A 67 SQVLGLGINGKVLQIFNKRTQEKFALKMLQ 96 (400)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEE
T ss_pred cceeeeccCeEEEEEEECCCCCEEEEEEeC
Confidence 457999999999999332 79999764
No 331
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=22.49 E-value=31 Score=28.72 Aligned_cols=27 Identities=19% Similarity=0.026 Sum_probs=21.4
Q ss_pred cccccCcCCcCceeecc----CCCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
+...||.|.+|.||.|. +..+|+|..+
T Consensus 27 ~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~ 57 (353)
T 3txo_A 27 FIRVLGKGSFGKVMLARVKETGDLYAVKVLK 57 (353)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEE
T ss_pred EEEEEeeCCCEEEEEEEEcCCCCEEEEEEEE
Confidence 44779999999999993 2378999765
No 332
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=22.35 E-value=23 Score=27.87 Aligned_cols=28 Identities=21% Similarity=0.052 Sum_probs=21.4
Q ss_pred hcccccCcCCcCceeeccC---------CCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD---------KVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~---------~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.. ..+|+|...
T Consensus 28 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~ 64 (322)
T 1p4o_A 28 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN 64 (322)
T ss_dssp EEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECC
T ss_pred eeeeEeccCCceEEEeeeecCccCCCCceEEEEEecc
Confidence 4567899999999999832 268888653
No 333
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=22.33 E-value=37 Score=29.19 Aligned_cols=29 Identities=21% Similarity=0.141 Sum_probs=22.2
Q ss_pred hcccccCcCCcCceeeccC----CCeeEEeeeh
Q 040944 90 QQNSEAGRGSEPDRHNASD----KVGAIIFCEY 118 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~----~~~aiKFh~~ 118 (188)
.+...||.|.+|.||.|.. ..+|+|..+-
T Consensus 72 ~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k 104 (410)
T 3v8s_A 72 EVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSK 104 (410)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEH
T ss_pred EEEEEEEcCCCEEEEEEEECCCCcEEEEEEEeh
Confidence 3457899999999999932 3789997643
No 334
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=22.30 E-value=25 Score=28.05 Aligned_cols=28 Identities=18% Similarity=0.103 Sum_probs=22.1
Q ss_pred hcccccCcCCcCceeeccC------C---CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASD------K---VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~------~---~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.. . .+|+|...
T Consensus 48 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~ 84 (344)
T 1rjb_A 48 EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLK 84 (344)
T ss_dssp EEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEEC
T ss_pred eeeeeecCCCCceeEEeeeeccccCCcceEEEEEecc
Confidence 4678899999999999853 1 58898754
No 335
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=22.24 E-value=26 Score=28.89 Aligned_cols=27 Identities=33% Similarity=0.135 Sum_probs=21.1
Q ss_pred cccccCcCCcCceeeccC---C-CeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNASD---K-VGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~---~-~~aiKFh~ 117 (188)
+...||.|.+|.||.|.+ + .+|+|...
T Consensus 58 ~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~ 88 (348)
T 1u5q_A 58 DLREIGHGSFGAVYFARDVRNSEVVAIKKMS 88 (348)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEE
T ss_pred eeeEEccCCCEEEEEEEEccCCeEEEEEEEc
Confidence 346799999999999942 2 78999764
No 336
>1v4r_A Transcriptional repressor; helix-turn-helix, winged-helix, gene regulation; NMR {Streptomyces} SCOP: a.4.5.6
Probab=22.18 E-value=80 Score=21.67 Aligned_cols=44 Identities=11% Similarity=0.202 Sum_probs=26.0
Q ss_pred CCcccc-hhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccCCCccCCccceehh
Q 040944 28 NHEIVP-FRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKDPALNSKKEGVSEE 88 (188)
Q Consensus 28 nhE~VP-~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~~~~~~~YeGY~Lt 88 (188)
..+.+| ...|++.. |+|...+. +.|..|.. ++|.+. +..||.+.
T Consensus 31 ~g~~lps~~eLa~~~--------~vSr~tvr----~al~~L~~~Gli~~~-----~g~G~~v~ 76 (102)
T 1v4r_A 31 PGDTLPSVADIRAQF--------GVAAKTVS----RALAVLKSEGLVSSR-----GALGTVVE 76 (102)
T ss_dssp TTSBCCCHHHHHHHS--------SSCTTHHH----HHTTTTTTSSCCEEE-----TTTEEESC
T ss_pred CcCCCcCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCCEEEe-----CCCeEEEc
Confidence 344453 44555553 88844444 68888888 688763 22466654
No 337
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=22.01 E-value=28 Score=29.66 Aligned_cols=27 Identities=19% Similarity=0.142 Sum_probs=21.3
Q ss_pred hcccccCcCCcCceeeccC----CCeeEEee
Q 040944 90 QQNSEAGRGSEPDRHNASD----KVGAIIFC 116 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~----~~~aiKFh 116 (188)
.++..||.|.+|.||.|.+ ..+|+|.-
T Consensus 29 ~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~ 59 (484)
T 3nyv_A 29 KGQRVLGKGSFGEVILCKDKITGQECAVKVI 59 (484)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEE
T ss_pred EEeeEEecCCCEEEEEEEECCCCCEEEEEEE
Confidence 3467899999999999833 38899974
No 338
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=21.89 E-value=34 Score=32.85 Aligned_cols=28 Identities=18% Similarity=0.148 Sum_probs=22.9
Q ss_pred hcccccCcCCcCceeecc----CCCeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
.++..||.|.+|.||.|. +..+|+|..+
T Consensus 192 ~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~ 223 (689)
T 3v5w_A 192 SVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD 223 (689)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEE
T ss_pred EEEEEEecccCeEEEEEEECCCCCEEEEEEEe
Confidence 566889999999999993 3389999864
No 339
>1q1h_A TFE, transcription factor E, TFE; TFIIE, transcription initiation, preinitiation complex, RNA polymerase II, transcription bubble; 2.90A {Sulfolobus solfataricus} SCOP: a.4.5.41
Probab=21.57 E-value=56 Score=22.51 Aligned_cols=49 Identities=18% Similarity=0.201 Sum_probs=35.0
Q ss_pred cCccchhHHHHH-HhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhhhc-cccccC
Q 040944 11 LSKDDFKVLTAV-ETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDDEK-GVIHKD 75 (188)
Q Consensus 11 L~~~DfRVL~AI-E~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL~k-~LV~R~ 75 (188)
+.+.+++||..+ +.|. .+....|++.. |+|...+. +.|.+|.. +||.+.
T Consensus 16 ~~~~~l~Il~~l~~~g~----~~s~~eLa~~l--------gvs~~tV~----~~L~~L~~~GlV~~~ 66 (110)
T 1q1h_A 16 LGDDVIDVLRILLDKGT----EMTDEEIANQL--------NIKVNDVR----KKLNLLEEQGFVSYR 66 (110)
T ss_dssp SCSTTHHHHHHHHHHCS----CBCHHHHHHTT--------TSCHHHHH----HHHHHHHHHTSCEEE
T ss_pred cChHHHHHHHHHHHcCC----CCCHHHHHHHH--------CcCHHHHH----HHHHHHHHCCCEEEE
Confidence 456778888876 4442 36888888886 99855554 78888888 788753
No 340
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=21.24 E-value=34 Score=28.08 Aligned_cols=28 Identities=11% Similarity=-0.028 Sum_probs=21.8
Q ss_pred hcccccCcC--CcCceeeccC----CCeeEEeee
Q 040944 90 QQNSEAGRG--SEPDRHNASD----KVGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVG--KESDVYea~~----~~~aiKFh~ 117 (188)
.++..||.| .+|.||.|.+ ..+|+|...
T Consensus 28 ~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~ 61 (389)
T 3gni_B 28 ELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRIN 61 (389)
T ss_dssp EEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEE
T ss_pred EEEecccCCcCCceEEEEEEEcCCCCEEEEEEec
Confidence 455778889 9999999933 378999765
No 341
>1fse_A GERE; helix-turn-helix DNA-binding protein transcriptional regulat transcription; 2.05A {Bacillus subtilis} SCOP: a.4.6.2
Probab=21.20 E-value=24 Score=22.31 Aligned_cols=48 Identities=10% Similarity=0.024 Sum_probs=31.8
Q ss_pred HHhcccCccchhHHHHHHhhccCCcccchhhhhhhhhhhhhhhCCCCCcccccccccchhhh
Q 040944 6 DVLRYLSKDDFKVLTAVETGMRNHEIVPFRTRASHCFSQALEEHGFPVPSAVDCNRHCIDDD 67 (188)
Q Consensus 6 e~~r~L~~~DfRVL~AIE~GMRnhE~VP~elI~k~s~~~~~~~hgls~ee~vd~~r~~l~rL 67 (188)
..+..|++.+..||..+-.|+ +...|++.. |+|...+..++.+...+|
T Consensus 7 ~~~~~L~~~e~~il~~~~~g~------s~~eIA~~l--------~is~~tV~~~~~~~~~kl 54 (74)
T 1fse_A 7 QSKPLLTKREREVFELLVQDK------TTKEIASEL--------FISEKTVRNHISNAMQKL 54 (74)
T ss_dssp -CCCCCCHHHHHHHHHHTTTC------CHHHHHHHH--------TSCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHcCC------CHHHHHHHH--------CCCHHHHHHHHHHHHHHH
Confidence 446778999999999886665 667788875 888444443444444333
No 342
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=21.08 E-value=28 Score=30.02 Aligned_cols=28 Identities=25% Similarity=0.211 Sum_probs=18.6
Q ss_pred hcccccCcCCcCceeeccCC----CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASDK----VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~----~~aiKFh~ 117 (188)
.++..||.|.+|.||.|.+. .+|+|.-.
T Consensus 40 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~ 71 (494)
T 3lij_A 40 QRVKKLGSGAYGEVLLCRDKVTHVERAIKIIR 71 (494)
T ss_dssp EEEEEEECC---EEEEEEETTTCCEEEEEEEE
T ss_pred EEeeEEecCCCEEEEEEEECCCCcEEEEEEEe
Confidence 34678999999999999332 78888754
No 343
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=20.99 E-value=29 Score=27.60 Aligned_cols=27 Identities=15% Similarity=0.054 Sum_probs=21.0
Q ss_pred cccccCcCCcCceeecc----C---C-CeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNAS----D---K-VGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~----~---~-~~aiKFh~ 117 (188)
+...||.|.+|.||.|. + + .+|+|.-.
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~ 61 (327)
T 3lxl_A 27 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQ 61 (327)
T ss_dssp EEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEES
T ss_pred hhhhccCCCCeEEEEEEeccCCCCcceEEEEEEec
Confidence 45789999999999985 2 2 78898753
No 344
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=20.76 E-value=47 Score=27.96 Aligned_cols=28 Identities=21% Similarity=0.059 Sum_probs=21.3
Q ss_pred hcccccCcCCcCceeeccCC----CeeEEeee
Q 040944 90 QQNSEAGRGSEPDRHNASDK----VGAIIFCE 117 (188)
Q Consensus 90 alG~~IGVGKESDVYea~~~----~~aiKFh~ 117 (188)
.+...||.|.+|.||.|... .+|+|.-+
T Consensus 41 ~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~ 72 (373)
T 2r5t_A 41 HFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQ 72 (373)
T ss_dssp EEEEEEECCTTCEEEEEEETTTCCEEEEEEEE
T ss_pred EEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEE
Confidence 34577999999999999332 67888754
No 345
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=20.72 E-value=43 Score=28.80 Aligned_cols=27 Identities=19% Similarity=0.134 Sum_probs=21.6
Q ss_pred cccccCcCCcCceeecc----CCCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNAS----DKVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~----~~~~aiKFh~ 117 (188)
+...||.|.+|.||.|. +..+|+|...
T Consensus 65 ~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~ 95 (412)
T 2vd5_A 65 ILKVIGRGAFSEVAVVKMKQTGQVYAMKIMN 95 (412)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEE
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEe
Confidence 45779999999999993 3388999764
No 346
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=20.70 E-value=31 Score=27.83 Aligned_cols=27 Identities=19% Similarity=0.017 Sum_probs=20.8
Q ss_pred cccccCcCCcCceeeccCC--------CeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNASDK--------VGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~~--------~~aiKFh~ 117 (188)
++..||.|.+|.||.|... .+|+|.-+
T Consensus 48 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~ 82 (333)
T 1mqb_A 48 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLK 82 (333)
T ss_dssp EEEEEEECSSSEEEEEEEEC---CCEEEEEEEEEC
T ss_pred cccEEecCCCeEEEEEEEecCCCCccccEEEEEcC
Confidence 4578999999999998321 38888754
No 347
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=20.24 E-value=28 Score=29.05 Aligned_cols=28 Identities=18% Similarity=0.011 Sum_probs=22.1
Q ss_pred cccccCcCCcCceeeccCC----CeeEEeeeh
Q 040944 91 QNSEAGRGSEPDRHNASDK----VGAIIFCEY 118 (188)
Q Consensus 91 lG~~IGVGKESDVYea~~~----~~aiKFh~~ 118 (188)
+...||.|.+|.||.|... .+|+|..+.
T Consensus 24 ~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~ 55 (353)
T 2i0e_A 24 FLMVLGKGSFGKVMLSERKGTDELYAVKILKK 55 (353)
T ss_dssp EEEEEEEETTEEEEEEEETTEEEEEEEEEEEH
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEH
Confidence 4577999999999999443 689997653
No 348
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=20.23 E-value=37 Score=27.35 Aligned_cols=17 Identities=12% Similarity=-0.011 Sum_probs=14.6
Q ss_pred cccccCcCCcCceeecc
Q 040944 91 QNSEAGRGSEPDRHNAS 107 (188)
Q Consensus 91 lG~~IGVGKESDVYea~ 107 (188)
+...||.|.+|.||.|.
T Consensus 19 ~~~~lG~G~~g~Vy~~~ 35 (327)
T 3lzb_A 19 KIKVLGSGAFGTVYKGL 35 (327)
T ss_dssp EEEEEEECSSEEEEEEE
T ss_pred EEEEeeeCCCeEEEEEE
Confidence 45789999999999994
No 349
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=20.05 E-value=36 Score=27.45 Aligned_cols=27 Identities=15% Similarity=0.087 Sum_probs=20.6
Q ss_pred cccccCcCCcCceeecc-------CCCeeEEeee
Q 040944 91 QNSEAGRGSEPDRHNAS-------DKVGAIIFCE 117 (188)
Q Consensus 91 lG~~IGVGKESDVYea~-------~~~~aiKFh~ 117 (188)
+...||.|.+|.||.|. +..+|+|..+
T Consensus 21 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~ 54 (327)
T 3a62_A 21 LLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLK 54 (327)
T ss_dssp EEEEEEEETTEEEEEEEECSSTTTTCEEEEEEEC
T ss_pred EEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEE
Confidence 45779999999999873 2278888754
Done!