BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 040948
         (286 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q7X9H9|AGL93_ARATH Agamous-like MADS-box protein AGL93 OS=Arabidopsis thaliana
          GN=AGL93 PE=1 SV=1
          Length = 289

 Score = 64.7 bits (156), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 42/58 (72%), Gaps = 1/58 (1%)

Query: 28 NFEKRKETLKNKAHELETLCDVMVCLVCYGPDGK-VETWPEDKTKVNDMIDKYKELRE 84
          N   R++T+  KA EL TLC++ VC++ YG DGK ++TWP+D++KV DM +++  L E
Sbjct: 37 NLSMREQTMFKKALELSTLCNIDVCVIYYGRDGKLIKTWPDDQSKVRDMAERFSRLHE 94


>sp|Q7XJK8|PHE2_ARATH MADS-box transcription factor PHERES 2 OS=Arabidopsis thaliana
           GN=PHE2 PE=1 SV=1
          Length = 278

 Score = 53.5 bits (127), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 4/103 (3%)

Query: 8   VKRKRSVKLIEEHGGNSRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKV-ETWP 66
           +KRK  + LIE     SR+  F KRK+ +  K  EL TLC V  C V Y P   + E WP
Sbjct: 1   MKRKMKLSLIE--NSVSRKTTFTKRKKGMTKKLTELVTLCGVEACAVVYSPFNSIPEAWP 58

Query: 67  EDKTKVNDMIDKYKELREMPVLMKKAEQRLDLLELFESKKQKL 109
             +  V D++ K+ EL  +    K  +Q   + +    +K++L
Sbjct: 59  S-REGVEDVVSKFMELSVLDRTKKMVDQETFISQRIAKEKEQL 100


>sp|Q9XJ66|MAD22_ORYSJ MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica
          GN=MADS22 PE=2 SV=1
          Length = 228

 Score = 51.2 bits (121), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 4/72 (5%)

Query: 8  VKRKRSVKLIEEHGGNSRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPE 67
           + +R +K IE     +RQ  F KR+  L  KA EL  LCD  V L+ +   GK+  +  
Sbjct: 2  ARERREIKRIE--SAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFA- 58

Query: 68 DKTKVNDMIDKY 79
            + +N++IDKY
Sbjct: 59 -SSSMNEIIDKY 69


>sp|Q9XJ60|MAD50_ORYSJ MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica
           GN=MADS50 PE=2 SV=1
          Length = 230

 Score = 51.2 bits (121), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 8/145 (5%)

Query: 8   VKRKRSVKLIEEHGGNSRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPE 67
           V+ K  +K IE     SRQ  F KR+  L  KA EL  LCD  V L+ + P GK+  +  
Sbjct: 2   VRGKTQMKRIE--NPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFAS 59

Query: 68  DKTKVNDMIDKYKELREMPVLMKKAEQRLDLLELFESKKQKLMEKKKAFVEKMFSILETK 127
             T+    I++Y+   +  +  K  +Q    +E  ++    L +K +A       +L  K
Sbjct: 60  ASTQ--KTIERYRTYTKENIGNKTVQQD---IEQVKADADGLAKKLEALETYKRKLLGEK 114

Query: 128 IDEASSVEELGVVYNKVESKLASMR 152
           +DE  S+EEL  +  K+E  L S+R
Sbjct: 115 LDEC-SIEELHSLEVKLERSLISIR 138


>sp|P35632|AP3_ARATH Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3
           PE=1 SV=1
          Length = 232

 Score = 49.3 bits (116), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 10/143 (6%)

Query: 11  KRSVKLIEEHGGNSRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKT 70
           K  +K IE     +RQ  + KR+  L  KAHEL  LCD  V ++ +    K+  +    T
Sbjct: 5   KIQIKRIE--NQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISPNT 62

Query: 71  KVNDMIDKYKELREMPVLMKKAEQRLDLLELFESKKQKLMEKKKAFVEKMFSILETKIDE 130
              +++D Y+ + ++ V   + E+        +  K+KL+E  +    ++   L   +DE
Sbjct: 63  TTKEIVDLYQTISDVDVWATQYER-------MQETKRKLLETNRNLRTQIKQRLGECLDE 115

Query: 131 ASSVEELGVVYNKVESKLASMRE 153
              ++EL  + +++E+    +RE
Sbjct: 116 L-DIQELRRLEDEMENTFKLVRE 137


>sp|Q7XJK5|AGL90_ARATH Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana
           GN=AGL90 PE=1 SV=2
          Length = 320

 Score = 48.9 bits (115), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 7/125 (5%)

Query: 12  RSVKLIEEHGGNSRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKV-ETWPEDKT 70
           + VKL       SR+ +F KRK  +  K HEL TLC V  C + Y P   V E+WP  + 
Sbjct: 2   KKVKLSLIANERSRKTSFMKRKNGIFKKLHELSTLCGVQACALIYSPFIPVPESWPS-RE 60

Query: 71  KVNDMIDKYKELREMPVLMKKAEQRLDLLELFESKKQKL----MEKKKAFVEK-MFSILE 125
               +  K+ E+       K  +Q   L+E     K++L     E ++  V + MF  +E
Sbjct: 61  GAKKVASKFLEMPRTARTRKMMDQETHLMERITKAKEQLKNLAAENRELQVRRFMFDCVE 120

Query: 126 TKIDE 130
            K+ +
Sbjct: 121 GKMSQ 125


>sp|Q9C6V4|AGL92_ARATH Agamous-like MADS-box protein AGL92 OS=Arabidopsis thaliana
          GN=AGL92 PE=1 SV=1
          Length = 464

 Score = 48.9 bits (115), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 1/71 (1%)

Query: 11 KRSVKLIEEHGGNSRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKT 70
          +   KL+     + R+  F KR   ++ K HEL TLCD+  C V Y P      WP  + 
Sbjct: 2  RTKTKLVLIPDRHFRRATFRKRNAGIRKKLHELTTLCDIKACAVIYSPFENPTVWPSTE- 60

Query: 71 KVNDMIDKYKE 81
           V ++I ++ E
Sbjct: 61 GVQEVISEFME 71


>sp|Q7XJK6|AGL36_ARATH Agamous-like MADS-box protein AGL36 OS=Arabidopsis thaliana
           GN=AGL36 PE=1 SV=1
          Length = 366

 Score = 48.1 bits (113), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 11/155 (7%)

Query: 12  RSVKLIEEHGGNSRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKV-ETWPEDKT 70
           + VKL       SR+ +F KRK+ +  K HEL TLC V  C + Y P   V E+WP  + 
Sbjct: 2   KKVKLSLIANERSRKTSFIKRKDGIFKKLHELSTLCGVQACALIYSPFIPVPESWPS-RE 60

Query: 71  KVNDMIDKYKELREMPVLMKKAEQRLDLLELFESKKQKL----MEKKKAFVEK-MFSILE 125
               +  ++ E+       K  +Q   L+E     K++L     E ++  V + MF  +E
Sbjct: 61  GAKKVASRFLEMPPTARTKKMMDQETYLMERITKAKEQLKNLAAENRELQVRRFMFDCVE 120

Query: 126 TKIDE----ASSVEELGVVYNKVESKLASMRETIE 156
            K+ +    A  +++L    N    +L    E+I+
Sbjct: 121 GKMSQYHYDAKDLQDLQSCINLYLDQLNGRIESIK 155


>sp|Q9FJK3|AGL80_ARATH Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana
           GN=AGL80 PE=1 SV=1
          Length = 321

 Score = 47.8 bits (112), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 7/120 (5%)

Query: 11  KRSVKLIEEHGGNSRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGP-DGKVETWPEDK 69
           ++ VKL      +SR+  F+KRK+ L  K HEL TLC +  C + Y P D   E WP + 
Sbjct: 3   RKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPSN- 61

Query: 70  TKVNDMIDKYKELREMPVLMKKAEQRLDLLELFESKKQKLMEKKK-----AFVEKMFSIL 124
           + V  ++ +++ L EM    K  +Q   L +      + L  ++K        E MF  L
Sbjct: 62  SGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRELEMTEVMFQCL 121


>sp|Q69TG5|MAD55_ORYSJ MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica
          GN=MADS55 PE=2 SV=2
          Length = 245

 Score = 47.8 bits (112), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 2/56 (3%)

Query: 24 SRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKTKVNDMIDKY 79
          +RQ  F KR+  L  KA EL  LCD  V LV +   GK+  +    + +N++IDKY
Sbjct: 16 ARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQFA--SSNMNEIIDKY 69


>sp|O64645|SOC1_ARATH MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1
          Length = 214

 Score = 47.4 bits (111), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 4/72 (5%)

Query: 8  VKRKRSVKLIEEHGGNSRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPE 67
          V+ K  +K IE     SRQ  F KR+  L  KA EL  LCD  V L+ + P GK+  +  
Sbjct: 2  VRGKTQMKRIE--NATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFAS 59

Query: 68 DKTKVNDMIDKY 79
            + + D ID+Y
Sbjct: 60 --SNMQDTIDRY 69


>sp|Q8RVL4|DEF21_ANTMA MADS-box protein defh21 OS=Antirrhinum majus GN=DEFH21 PE=2 SV=1
          Length = 247

 Score = 47.0 bits (110), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 2/69 (2%)

Query: 11 KRSVKLIEEHGGNSRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKT 70
          K  VK IE     SRQ  F KR+  L  K HEL  LCD  + L+ +   GK+  +     
Sbjct: 5  KIEVKRIE--NNTSRQVTFSKRRSGLMKKTHELSVLCDAQIGLIVFSTKGKLTEYCTPPF 62

Query: 71 KVNDMIDKY 79
           +  +ID+Y
Sbjct: 63 SMKQIIDRY 71


>sp|Q9C6V3|AGL86_ARATH Agamous-like MADS-box protein AGL86 OS=Arabidopsis thaliana
           GN=AGL86 PE=1 SV=1
          Length = 339

 Score = 46.2 bits (108), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 6/113 (5%)

Query: 23  NSRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKTKVNDMIDKYKE- 81
            SR+  F KRK  + NK HEL TLC V  C V   P      WP  +  V + +  + E 
Sbjct: 14  TSRRTTFRKRKGGITNKLHELTTLCGVKACAVISSPYENPVVWPSTE-GVQEAVSMFMER 72

Query: 82  -LREMPVLMKKAEQRLDLLELFESKKQKLME---KKKAFVEKMFSILETKIDE 130
              E   LM   E  L      E+KK + +    ++    + MF  +E K+ E
Sbjct: 73  PATEQSKLMMSHETYLQDKITKETKKLESLRRENRESQLRQFMFDCVEGKMSE 125


>sp|A2Z9Q7|MAD56_ORYSI MADS-box transcription factor 56 OS=Oryza sativa subsp. indica
           GN=MADS56 PE=2 SV=2
          Length = 233

 Score = 46.2 bits (108), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 5/130 (3%)

Query: 23  NSRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKTKVNDMIDKYKEL 82
            SRQ  F KR+  L  KA EL  LCD  V L+ + P G++  +    + +   ID+YK  
Sbjct: 15  TSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPS-LQKTIDRYKAY 73

Query: 83  REMPVLMKKAEQRLDLLELFESKKQKLMEKKKAFVEKMFSILETKIDEASSVEELGVVYN 142
            +  V  K  +Q    ++  +     L +K +A  E    IL   + E  S+EEL  +  
Sbjct: 74  TKDHVNNKTIQQD---IQQVKDDTLGLAKKLEALDESRRKILGENL-EGCSIEELRGLEM 129

Query: 143 KVESKLASMR 152
           K+E  L ++R
Sbjct: 130 KLEKSLHNIR 139


>sp|Q03378|GLOB_ANTMA Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1
          SV=1
          Length = 215

 Score = 45.8 bits (107), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)

Query: 11 KRSVKLIEEHGGNSRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKT 70
          K  +K IE    ++RQ  + KR+  +  KA E+  LCD  V ++ +   GK+  +    T
Sbjct: 5  KIEIKRIE--NSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSPST 62

Query: 71 KVNDMIDKYKEL 82
           + DM+D Y +L
Sbjct: 63 TLVDMLDHYHKL 74


>sp|Q07474|MADS2_PETHY Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2
          SV=1
          Length = 212

 Score = 45.8 bits (107), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 2/68 (2%)

Query: 14 VKLIEEHGGNSRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKTKVN 73
          +K IE    ++RQ  + KR+  +  KA E+  LCD  V L+ +G  GK+  +    T + 
Sbjct: 8  IKRIE--NSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIFGNSGKMHEYCSPSTTLP 65

Query: 74 DMIDKYKE 81
          DM+D Y++
Sbjct: 66 DMLDGYQK 73


>sp|P0C5B2|MAD56_ORYSJ MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica
           GN=MADS56 PE=2 SV=1
          Length = 233

 Score = 45.4 bits (106), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 5/130 (3%)

Query: 23  NSRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKTKVNDMIDKYKEL 82
            SRQ  F KR+  L  KA EL  LCD  V L+ + P G++  +    + +   ID+YK  
Sbjct: 15  TSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPS-LQKTIDRYKAY 73

Query: 83  REMPVLMKKAEQRLDLLELFESKKQKLMEKKKAFVEKMFSILETKIDEASSVEELGVVYN 142
            +  V  K  +Q    ++  +     L +K +A  E    IL   + E  S+EEL  +  
Sbjct: 74  TKDHVNNKTIQQD---IQQVKDDTLGLAKKLEALDESRRKILGENL-EGFSIEELRGLEM 129

Query: 143 KVESKLASMR 152
           K+E  L  +R
Sbjct: 130 KLEKSLHKIR 139


>sp|Q6Q9I2|MAD15_ORYSJ MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica
          GN=MADS15 PE=1 SV=2
          Length = 267

 Score = 45.4 bits (106), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 25 RQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKTKVNDMIDKY 79
          RQ  F KR+  L  KAHE+  LCD  V  + + P GK+  +  D ++++ ++++Y
Sbjct: 17 RQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATD-SRMDKILERY 70


>sp|Q9XGJ4|GGM13_GNEGN MADS-box protein GGM13 OS=Gnetum gnemon GN=GGM13 PE=2 SV=1
          Length = 237

 Score = 45.4 bits (106), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 33/58 (56%)

Query: 25 RQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKTKVNDMIDKYKEL 82
          RQ  F KR+  L  KAHEL  LCD  + L+ +   GK+  +    + +  +I++Y+++
Sbjct: 17 RQVTFSKRRGGLLKKAHELSVLCDAELGLIIFSSSGKLFEYSSASSSMKKIIERYQKV 74


>sp|Q9ATE5|FBP24_PETHY MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1
          Length = 268

 Score = 45.1 bits (105), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 2/69 (2%)

Query: 11 KRSVKLIEEHGGNSRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKT 70
          K  VK IE     SRQ  F KR+  L  K HEL  LCD  + L+ +   GK+  +     
Sbjct: 8  KIEVKRIE--NKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQPH 65

Query: 71 KVNDMIDKY 79
           ++ +I +Y
Sbjct: 66 SMSQIISRY 74


>sp|Q2QQA3|MAD20_ORYSJ MADS-box transcription factor 20 OS=Oryza sativa subsp. japonica
           GN=MADS20 PE=2 SV=2
          Length = 233

 Score = 44.7 bits (104), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 60/151 (39%), Gaps = 48/151 (31%)

Query: 24  SRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKTKVNDMIDKYKE-- 81
           SRQ  F KR+  L  KAHE+  LCDV V  + +   G +  +    T +  +++KY    
Sbjct: 16  SRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASSHTTMERILEKYDRHE 75

Query: 82  --------LREMPVL-----------------MKKAE-----QRLDLLEL---------- 101
                   + E P L                 +KK++     Q LD L L          
Sbjct: 76  LLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQELDSLTLQDIQQLENQI 135

Query: 102 ------FESKKQKLMEKKKAFVEKMFSILET 126
                   S+K+KL+ +K   +EK  + LET
Sbjct: 136 DTSLNNIRSRKEKLLMEKNTILEKKITELET 166


>sp|Q41274|AGL8_SINAL Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba
          GN=AGL8 PE=2 SV=1
          Length = 241

 Score = 44.3 bits (103), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 25 RQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKT--KVNDMIDKY 79
          RQ  F KR+  L  KAHE+  LCD  V LV +   GK+  +  D    K+ +  D+Y
Sbjct: 17 RQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTDSCMEKILERYDRY 73


>sp|Q38838|AGL14_ARATH Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana
          GN=AGL14 PE=1 SV=2
          Length = 221

 Score = 44.3 bits (103), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 2/55 (3%)

Query: 8  VKRKRSVKLIEEHGGNSRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKV 62
          V+ K  +K IE     SRQ  F KR+  L  KA EL  LCD  V L+ + P GK+
Sbjct: 2  VRGKTEMKRIE--NATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKL 54


>sp|Q39295|AGL15_BRANA Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15
          PE=3 SV=1
          Length = 264

 Score = 44.3 bits (103), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 2/49 (4%)

Query: 14 VKLIEEHGGNSRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKV 62
          +K IE    NSRQ  F KR+  L  KAHEL  LCD  V ++ +   GK+
Sbjct: 8  IKRIE--NANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKL 54


>sp|Q2QW53|MAD13_ORYSJ MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica
          GN=MADS13 PE=1 SV=2
          Length = 270

 Score = 43.9 bits (102), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 3/68 (4%)

Query: 14 VKLIEEHGGNSRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKTKVN 73
          +K IE     SRQ  F KR+  L  KA+EL  LCD  V L+ +   G++  +  +   V 
Sbjct: 8  IKRIE--NTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYS-NNNNVK 64

Query: 74 DMIDKYKE 81
            ID+YK+
Sbjct: 65 ATIDRYKK 72


>sp|Q8RYD9|TT16_ARATH Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana GN=TT16 PE=1
          SV=1
          Length = 252

 Score = 43.5 bits (101), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 31/56 (55%)

Query: 24 SRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKTKVNDMIDKY 79
          +RQ  F KR+  L  K  EL  LCD  + L+ +   GK+  +  ++ ++  +ID+Y
Sbjct: 16 ARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSEQNRMPQLIDRY 71


>sp|Q6Z6W2|MAD57_ORYSJ MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica
          GN=MADS57 PE=2 SV=2
          Length = 241

 Score = 43.5 bits (101), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 2/62 (3%)

Query: 23 NSRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKTKVNDMIDKYKEL 82
           SRQ  F KR+  L  KA EL  LCD  V LV +   G++  +    T +  +ID+Y   
Sbjct: 15 TSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRL--YEFSSTNMKTVIDRYTNA 72

Query: 83 RE 84
          +E
Sbjct: 73 KE 74


>sp|Q5K4R0|MAD47_ORYSJ MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica
          GN=MADS47 PE=1 SV=2
          Length = 246

 Score = 43.1 bits (100), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 2/56 (3%)

Query: 24 SRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKTKVNDMIDKY 79
          +RQ  F KR+  L  KA EL  LCD  V LV +   GK+  +    T +  +ID+Y
Sbjct: 35 ARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFA--STSMEQIIDRY 88


>sp|Q9FKK2|AGL62_ARATH Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana
           GN=AGL62 PE=1 SV=1
          Length = 299

 Score = 43.1 bits (100), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 65/131 (49%), Gaps = 11/131 (8%)

Query: 9   KRKRSVKLIEEHGGNSRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPED 68
           K ++ +++++    ++ Q  F KR+  L  KA EL TLC   V +V + P  KV ++   
Sbjct: 6   KGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSF--G 63

Query: 69  KTKVNDMIDKYKELREMPVLMKKAEQRLDLLELFESKKQKLMEKKKAFVEKMFSILET-- 126
              V+ +ID++     +P        + + ++L E+++  +++     + ++ S LET  
Sbjct: 64  HPNVDSVIDRFINNNPLP------PHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEK 117

Query: 127 -KIDEASSVEE 136
            K DE   + E
Sbjct: 118 KKYDELKKIRE 128


>sp|Q38876|AGL8_ARATH Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana
          GN=AGL8 PE=1 SV=1
          Length = 242

 Score = 43.1 bits (100), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 25 RQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKT--KVNDMIDKY 79
          RQ  F KR+  L  KAHE+  LCD  V L+ +   GK+  +  D    ++ +  D+Y
Sbjct: 17 RQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTDSCMERILERYDRY 73


>sp|Q944S9|MAD16_ORYSJ MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica
          GN=MADS16 PE=1 SV=2
          Length = 224

 Score = 43.1 bits (100), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 2/71 (2%)

Query: 11 KRSVKLIEEHGGNSRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKT 70
          K  +K IE     +RQ  + KR+  +  KA EL  LCD  V ++ +   GK   +    T
Sbjct: 5  KIEIKRIE--NATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPST 62

Query: 71 KVNDMIDKYKE 81
           +  + D+Y++
Sbjct: 63 DIKGIFDRYQQ 73


>sp|Q9SZJ6|AGL21_ARATH Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana
          GN=AGL21 PE=1 SV=1
          Length = 228

 Score = 42.7 bits (99), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)

Query: 22 GNSRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKTKVNDMIDKY 79
            SRQ  F KR++ L  KA EL  LCD  V L+ +   GK+  +     K   +ID+Y
Sbjct: 14 STSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASSSMK--SVIDRY 69


>sp|O82743|AGL19_ARATH Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana
           GN=AGL19 PE=1 SV=1
          Length = 219

 Score = 42.7 bits (99), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 18/150 (12%)

Query: 8   VKRKRSVKLIEEHGGNSRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPE 67
           V+ K  +K IE     SRQ  F KR+  L  KA EL  LCD  V LV + P  K+  +  
Sbjct: 2   VRGKTEMKRIE--NATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKL--YEF 57

Query: 68  DKTKVNDMIDKY-KELREMPVLMKK---AEQRLDLLELFESKKQKL-MEKKKAFVEKMFS 122
             + +   I++Y + ++E+    K+   ++Q  D       K ++L + K+K   E +  
Sbjct: 58  SSSSIAATIERYQRRIKEIGNNHKRNDNSQQARDETSGLTKKIEQLEISKRKLLGEGI-- 115

Query: 123 ILETKIDEASSVEELGVVYNKVESKLASMR 152
                  +A S+EEL  + N+++  L+ +R
Sbjct: 116 -------DACSIEELQQLENQLDRSLSRIR 138


>sp|P48007|PIST_ARATH Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI
          PE=1 SV=1
          Length = 208

 Score = 42.7 bits (99), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 2/72 (2%)

Query: 11 KRSVKLIEEHGGNSRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKT 70
          K  +K IE    N+R   F KR+  L  KA E+  LCD  V L+ +  +GK+  +     
Sbjct: 5  KIEIKRIE--NANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCPSM 62

Query: 71 KVNDMIDKYKEL 82
           +  M+D+Y++L
Sbjct: 63 DLGAMLDQYQKL 74


>sp|Q2V0P1|MAD58_ORYSJ MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica
           GN=MADS58 PE=2 SV=1
          Length = 272

 Score = 42.4 bits (98), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 4/78 (5%)

Query: 3   AETTQVKRKRSVKLIEEHGGNSRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKV 62
           AE    + K  +K IE     +RQ  F KR+  L  KA+EL  LCD  V LV +   G++
Sbjct: 39  AEKIGSRGKIEIKRIE--NTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRL 96

Query: 63  ETWPEDKTKVNDMIDKYK 80
             +  +  K  + I++YK
Sbjct: 97  YEYSNNSVK--ETIERYK 112


>sp|Q38847|AGL15_ARATH Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana
           GN=AGL15 PE=1 SV=1
          Length = 268

 Score = 42.4 bits (98), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 6/99 (6%)

Query: 14  VKLIEEHGGNSRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKTKVN 73
           +K IE    NSRQ  F KR+  L  KA EL  LCD  V ++ +   GK+  +    T + 
Sbjct: 8   IKRIE--NANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKL--FEYSSTGMK 63

Query: 74  DMIDKYKELREMPVLMKKAEQRLDLLELFESKKQKLMEK 112
             + +Y   +       KAE+    +++ + +  KL EK
Sbjct: 64  QTLSRYGNHQSSSA--SKAEEDCAEVDILKDQLSKLQEK 100


>sp|Q8GTF5|AP1A_BRAOB Floral homeotic protein APETALA 1 A OS=Brassica oleracea var.
          botrytis GN=AP1A PE=2 SV=1
          Length = 256

 Score = 42.4 bits (98), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 25 RQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKTKVNDMIDKY 79
          RQ  F KR+  L  KAHE+  LCD  V LV +   GK+  +  D   +  ++++Y
Sbjct: 17 RQVTFSKRRAGLMKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSC-MEKILERY 70


>sp|B4YPW6|AP1A_BRAOA Floral homeotic protein APETALA 1 A OS=Brassica oleracea var.
          alboglabra GN=AP1A PE=3 SV=1
          Length = 256

 Score = 42.4 bits (98), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 25 RQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKTKVNDMIDKY 79
          RQ  F KR+  L  KAHE+  LCD  V LV +   GK+  +  D   +  ++++Y
Sbjct: 17 RQVTFSKRRAGLMKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSC-MEKILERY 70


>sp|Q96356|2AP1_BRAOT Floral homeotic protein APETALA 1-2 OS=Brassica oleracea var.
          italica GN=2AP1 PE=2 SV=1
          Length = 256

 Score = 42.4 bits (98), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 25 RQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKTKVNDMIDKY 79
          RQ  F KR+  L  KAHE+  LCD  V LV +   GK+  +  D   +  ++++Y
Sbjct: 17 RQVTFSKRRAGLMKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSC-MEKILERY 70


>sp|Q38841|AGL12_ARATH Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana
          GN=AGL12 PE=2 SV=2
          Length = 211

 Score = 42.4 bits (98), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 25 RQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKTKVNDMIDKY 79
          RQ  F KR+  L  KA EL  LCD  + +V + P GK+       T +  MIDKY
Sbjct: 17 RQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELATKGT-MEGMIDKY 70


>sp|Q40702|MADS2_ORYSJ MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica
          GN=MADS2 PE=2 SV=1
          Length = 209

 Score = 42.4 bits (98), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 2/70 (2%)

Query: 11 KRSVKLIEEHGGNSRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKT 70
          K  +K IE     +RQ  F KR+  +  KA E+  LCD  V +V +   GK+  +   KT
Sbjct: 5  KIEIKRIE--NSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPKT 62

Query: 71 KVNDMIDKYK 80
           ++ +++KY+
Sbjct: 63 SLSRILEKYQ 72


>sp|Q9S7Q7|FLC_ARATH MADS-box protein FLOWERING LOCUS C OS=Arabidopsis thaliana GN=FLC
          PE=2 SV=1
          Length = 196

 Score = 42.4 bits (98), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 3/71 (4%)

Query: 9  KRKRSVKLIEEHGGNSRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPED 68
          ++K  +K IE    +SRQ  F KR+  L  KA +L  LCD  V L+     GK+ ++   
Sbjct: 3  RKKLEIKRIE--NKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSG 60

Query: 69 KTKVNDMIDKY 79
             V  ++D+Y
Sbjct: 61 DNLVK-ILDRY 70


>sp|P29383|AGL3_ARATH Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana
          GN=AGL3 PE=2 SV=2
          Length = 258

 Score = 42.0 bits (97), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 31/57 (54%)

Query: 25 RQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKTKVNDMIDKYKE 81
          RQ  F KR+  L  KA+EL  LCD  + L+ +   GK+  +    + +   +DKY++
Sbjct: 17 RQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSSPSGMARTVDKYRK 73


>sp|A2IB53|AP1_CITSI Floral homeotic protein APETALA 1 OS=Citrus sinensis GN=AP1 PE=2
          SV=1
          Length = 256

 Score = 42.0 bits (97), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 25 RQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKTKVNDMIDKY 79
          RQ  F KR+  L  KAHE+  LCD  V LV +   GK+  +  D   +  ++++Y
Sbjct: 17 RQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSC-MEKILERY 70


>sp|P35631|AP1_ARATH Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1
          PE=1 SV=2
          Length = 256

 Score = 42.0 bits (97), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 25 RQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKTKVNDMIDKY 79
          RQ  F KR+  L  KAHE+  LCD  V LV +   GK+  +  D   +  ++++Y
Sbjct: 17 RQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSC-MEKILERY 70


>sp|O89038|MEF2D_RAT Myocyte-specific enhancer factor 2D OS=Rattus norvegicus GN=Mef2d
           PE=1 SV=1
          Length = 507

 Score = 42.0 bits (97), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 12/151 (7%)

Query: 25  RQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKTKVNDMIDKYKELRE 84
           RQ  F KRK  L  KA+EL  LCD  + L+ +    K+  +    T ++ ++ KY E  E
Sbjct: 17  RQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQY--ASTDMDKVLLKYTEYNE 74

Query: 85  MPVLMKKAEQRLDLLELFESKKQKLMEKKKAFVEKMF---SILETKIDEASSVEELGVVY 141
                 ++    D++E    K     +  +   E       +LE K   AS  EEL  ++
Sbjct: 75  ----PHESRTNADIIETLRKKGFNGCDSPEPDGEDSLEQSPLLEDKYRRAS--EELDGLF 128

Query: 142 NKVESKLASMRETIELAI-IEEQKNQQFAAP 171
            +  S + +    + + + +  Q + QF+ P
Sbjct: 129 RRYGSSVPAPNFAMPVTVPVSNQSSMQFSNP 159


>sp|Q40885|AG_PETHY Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=1
          SV=1
          Length = 242

 Score = 42.0 bits (97), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 4/68 (5%)

Query: 14 VKLIEEHGGNSRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKTKVN 73
          +K IE     +RQ  F KR+  L  KA+EL  LCD  V L+ +   G++  +  +  K  
Sbjct: 24 IKRIE--NTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKAT 81

Query: 74 DMIDKYKE 81
            I++YK+
Sbjct: 82 --IERYKK 87


>sp|Q6VAM4|MAD23_ORYSJ MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica
          GN=MADS23 PE=2 SV=1
          Length = 159

 Score = 42.0 bits (97), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)

Query: 22 GNSRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKTKVNDMIDKYKE 81
            SRQ  F KR+  L  KA EL  LCD  V L+ +    ++  +     K   +I++Y E
Sbjct: 14 ATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASSSMK--SIIERYNE 71

Query: 82 LREMP 86
           +E P
Sbjct: 72 TKEDP 76


>sp|Q63943|MEF2D_MOUSE Myocyte-specific enhancer factor 2D OS=Mus musculus GN=Mef2d PE=1
           SV=2
          Length = 514

 Score = 42.0 bits (97), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 12/151 (7%)

Query: 25  RQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGKVETWPEDKTKVNDMIDKYKELRE 84
           RQ  F KRK  L  KA+EL  LCD  + L+ +    K+  +    T ++ ++ KY E  E
Sbjct: 17  RQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQY--ASTDMDKVLLKYTEYNE 74

Query: 85  MPVLMKKAEQRLDLLELFESKKQKLMEKKKAFVEKMF---SILETKIDEASSVEELGVVY 141
                 ++    D++E    K     +  +   E       +LE K   AS  EEL  ++
Sbjct: 75  ----PHESRTNADIIETLRKKGFNGCDSPEPDGEDSLEQSPLLEDKYRRAS--EELDGLF 128

Query: 142 NKVESKLASMRETIELAI-IEEQKNQQFAAP 171
            +  S + +    + + + +  Q + QF+ P
Sbjct: 129 RRYGSSVPAPNFAMPVTVPVSNQSSMQFSNP 159


>sp|P29381|AGL1_ARATH Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana
          GN=AGL1 PE=1 SV=1
          Length = 248

 Score = 42.0 bits (97), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 2  DAETTQVKRKRSVKLIEEHGGNSRQGNFEKRKETLKNKAHELETLCDVMVCLVCYGPDGK 61
          DAE+++   +  +++       +RQ  F KR+  L  KA+EL  LCD  V LV +   G+
Sbjct: 9  DAESSKKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGR 68

Query: 62 VETWPEDKTKVNDMIDKYKE 81
          +  +  +   V   I++YK+
Sbjct: 69 LYEYANN--SVRGTIERYKK 86


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.312    0.132    0.383 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,873,527
Number of Sequences: 539616
Number of extensions: 5241305
Number of successful extensions: 59564
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 393
Number of HSP's that attempted gapping in prelim test: 28530
Number of HSP's gapped (non-prelim): 17195
length of query: 286
length of database: 191,569,459
effective HSP length: 116
effective length of query: 170
effective length of database: 128,974,003
effective search space: 21925580510
effective search space used: 21925580510
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)