BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040951
(701 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2KJJ0|PRP6_BOVIN Pre-mRNA-processing factor 6 OS=Bos taurus GN=PRPF6 PE=2 SV=1
Length = 941
Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/755 (48%), Positives = 480/755 (63%), Gaps = 66/755 (8%)
Query: 10 YRYKNPTIREEFVDLKGKLTTVKAKEWERIPEIGDYSRSNKRK-RFESFVPVPDSLLQKA 68
YR + P I+++F DLK KL V +EW IPE+GD +R R+E PVPDS K
Sbjct: 131 YRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLTPVPDSFFAKH 190
Query: 69 RQEQQHVIALDPSSRAAGGAESVVT-----------------------DLTAVGEGRGKI 105
Q ++ ++DP GG + D+ +G+ R +
Sbjct: 191 LQTGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDMRKIGQARNTL 250
Query: 106 LTLKLDGISDSVTGLTVVDLSGYLTRMNDLKITTNSELRDILKARKIVRAIQ-------- 157
+ ++L +SDSV+G TVVD GYLT +N + T ++ DI KAR ++++++
Sbjct: 251 MDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKSVRETNPHHPP 310
Query: 158 ----AARLEELAKEEAAARKLITKGCNMCPKNEDVWLEACRLARPDEAKGVVAKGVRQIP 213
+ARLEE+ + AR LI KG MCPK+EDVWLEA RL D AK VVA+ VR +P
Sbjct: 311 AWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKAVVAQAVRHLP 370
Query: 214 KSVRLWLQAAELDHDKANKSRVLRMALDEIPDSVRLWKALVEISSEEEARILLHRAVECC 273
+SVR++++AAEL+ D K RVLR AL+ +P+SVRLWKA VE+ E+ARI+L RAVECC
Sbjct: 371 QSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDARIMLSRAVECC 430
Query: 274 PLDVELWLALARLETYGVARSVLNKARKKLPKERAIWIAAAKLEEANGNTSMVGKIIERG 333
P VELWLALARLETY AR VLNKAR+ +P +R IWI AAKLEEANGNT MV KII+R
Sbjct: 431 PTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRA 490
Query: 334 IRALQGEEVVIDRDTWMKEAEIAEKAGS---------------------------DAEEC 366
I +L+ V I+R+ W+++AE +KAGS DA+ C
Sbjct: 491 ITSLRANGVEINREQWIQDAEECDKAGSVATCQAVMRAVIGIGIEEEDRKHTWMEDADSC 550
Query: 367 KKRGSIETARAIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVL 426
++E ARAI+++A VF +KKS+WL+AA EK HG+RESL ALL++AV + P+AEVL
Sbjct: 551 VAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVL 610
Query: 427 WLMGAKEKWLAGDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERARMLLAKARD 486
WLMGAK KWLAGDVPAAR IL A+ PNSEEIWLAA KLE EN E ERAR LLAKAR
Sbjct: 611 WLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARS 670
Query: 487 MGGTERVWMKSAIVERELGNNAEERGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKE 546
T RV+MKS +E LGN + EE LK + F LW+M GQ+EE+ +++A+E
Sbjct: 671 SAPTARVFMKSVKLEWVLGNLVAAQELCEEALKHYEDFPKLWMMKGQIEEQEELVEKARE 730
Query: 547 AYQSGCNQCPNCIPLWYSLANLEEKRNGLNGLSKARAVLSVARLKNPLNPEIWLATIRAE 606
AY G +CP+ PLW L+ LEEK + L++ARA+L +RLKNP NP +WL ++R E
Sbjct: 731 AYNQGLKKCPHSTPLWLLLSRLEEK---VGQLTRARAILEKSRLKNPKNPGLWLESVRLE 787
Query: 607 SKHGNKKEADSFIAKALQKCPNSGILWAELIKMVPHHDRKSKGKDALVKSDRDPHVFAAV 666
+ G K A + +AKALQ+CPNSG+LW+E I + RK+K DAL K + DPHV AV
Sbjct: 788 YRAGLKNIASTLMAKALQECPNSGVLWSEAIFLEARPQRKTKSVDALKKCEHDPHVLLAV 847
Query: 667 AKLFWHDRKVDKARNWFNKAVSLDPDTGDFWALYY 701
AKLFW +RK+ KAR WF++ V +D D GD WA +Y
Sbjct: 848 AKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFY 882
>sp|Q91YR7|PRP6_MOUSE Pre-mRNA-processing factor 6 OS=Mus musculus GN=Prpf6 PE=2 SV=1
Length = 941
Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/755 (48%), Positives = 482/755 (63%), Gaps = 66/755 (8%)
Query: 10 YRYKNPTIREEFVDLKGKLTTVKAKEWERIPEIGDYSRSNKRK-RFESFVPVPDSLLQKA 68
YR + P I+++F DLK KL V +EW IPE+GD +R R+E PVPDS K
Sbjct: 131 YRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLTPVPDSFFAKH 190
Query: 69 RQEQQHVIALDPSSRAAGGAESVVT-----------------------DLTAVGEGRGKI 105
Q ++ ++DP GG + D+ +G+ R +
Sbjct: 191 LQTGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDMRKIGQARNTL 250
Query: 106 LTLKLDGISDSVTGLTVVDLSGYLTRMNDLKITTNSELRDILKARKIVRAIQ-------- 157
+ ++L +SDSV+G TVVD GYLT +N + T ++ DI KAR ++++++
Sbjct: 251 MDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKSVRETNPHHPP 310
Query: 158 ----AARLEELAKEEAAARKLITKGCNMCPKNEDVWLEACRLARPDEAKGVVAKGVRQIP 213
+ARLEE+ + AR LI KG MCPK+EDVWLEA RL D AK VVA+ VR +P
Sbjct: 311 AWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKAVVAQAVRHLP 370
Query: 214 KSVRLWLQAAELDHDKANKSRVLRMALDEIPDSVRLWKALVEISSEEEARILLHRAVECC 273
+SVR++++AAEL+ D K RVLR AL+ +P+SVRLWKA VE+ E+ARI+L RAVECC
Sbjct: 371 QSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDARIMLSRAVECC 430
Query: 274 PLDVELWLALARLETYGVARSVLNKARKKLPKERAIWIAAAKLEEANGNTSMVGKIIERG 333
P VELWLALARLETY AR VLNKAR+ +P +R IWI AAKLEEANGNT MV KII+R
Sbjct: 431 PTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRA 490
Query: 334 IRALQGEEVVIDRDTWMKEAEIAEKAGS---------------------------DAEEC 366
I +L+ V I+R+ W+++AE ++AGS DA+ C
Sbjct: 491 ITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEEDRKHTWMEDADSC 550
Query: 367 KKRGSIETARAIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVL 426
++E ARAI+++A VF +KKS+WL+AA EK HG+RESL ALL++AV + P+AEVL
Sbjct: 551 VAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVL 610
Query: 427 WLMGAKEKWLAGDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERARMLLAKARD 486
WLMGAK KWLAGDVPAAR IL A+ PNSEEIWLAA KLE EN E ERAR LLAKAR
Sbjct: 611 WLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARS 670
Query: 487 MGGTERVWMKSAIVERELGNNAEERGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKE 546
T RV+MKS +E LGN + + EE L+ + F LW+M GQ+EE+ +++A+E
Sbjct: 671 SAPTARVFMKSVKLEWVLGNISAAQELCEEALRHYEDFPKLWMMKGQIEEQGELMEKARE 730
Query: 547 AYQSGCNQCPNCIPLWYSLANLEEKRNGLNGLSKARAVLSVARLKNPLNPEIWLATIRAE 606
AY G +CP+ PLW L+ LEEK + L++ARA+L +RLKNP NP +WL ++R E
Sbjct: 731 AYNQGLKKCPHSTPLWLLLSRLEEK---IGQLTRARAILEKSRLKNPKNPGLWLESVRLE 787
Query: 607 SKHGNKKEADSFIAKALQKCPNSGILWAELIKMVPHHDRKSKGKDALVKSDRDPHVFAAV 666
+ G K A++ +AKALQ+CPNSGILW+E + + RK+K DAL K + DPHV AV
Sbjct: 788 YRAGLKNIANTLMAKALQECPNSGILWSEAVFLEARPQRKTKSVDALKKCEHDPHVLLAV 847
Query: 667 AKLFWHDRKVDKARNWFNKAVSLDPDTGDFWALYY 701
AKLFW +RK+ KAR WF++ V +D D GD WA +Y
Sbjct: 848 AKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFY 882
>sp|A1A5S1|PRP6_RAT Pre-mRNA-processing factor 6 OS=Rattus norvegicus GN=Prpf6 PE=2
SV=1
Length = 941
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/755 (48%), Positives = 480/755 (63%), Gaps = 66/755 (8%)
Query: 10 YRYKNPTIREEFVDLKGKLTTVKAKEWERIPEIGDYSRSNKRK-RFESFVPVPDSLLQKA 68
YR + P I+++F DLK KL V +EW IPE+GD +R R+E PVPDS K
Sbjct: 131 YRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLTPVPDSFFAKH 190
Query: 69 RQEQQHVIALDPSSRAAGGAESVVT-----------------------DLTAVGEGRGKI 105
Q ++ ++DP GG + D+ +G+ R +
Sbjct: 191 LQTGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDMRKIGQARNTL 250
Query: 106 LTLKLDGISDSVTGLTVVDLSGYLTRMNDLKITTNSELRDILKARKIVRAIQ-------- 157
+ ++L +SDSV+G TVVD GYLT +N + T ++ DI KAR ++++++
Sbjct: 251 MDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKSVRETNPHHPP 310
Query: 158 ----AARLEELAKEEAAARKLITKGCNMCPKNEDVWLEACRLARPDEAKGVVAKGVRQIP 213
+ARLEE+ + AR LI KG MCPK+EDVWLEA RL D AK VVA+ VR +P
Sbjct: 311 AWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKAVVAQAVRHLP 370
Query: 214 KSVRLWLQAAELDHDKANKSRVLRMALDEIPDSVRLWKALVEISSEEEARILLHRAVECC 273
+SVR++++AAEL+ D K RVLR AL+ +P+SVRLWKA VE+ E+ARI+L RAVECC
Sbjct: 371 QSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDARIMLSRAVECC 430
Query: 274 PLDVELWLALARLETYGVARSVLNKARKKLPKERAIWIAAAKLEEANGNTSMVGKIIERG 333
P VELWLALARLETY AR VLNKAR+ +P +R IWI AAKLEEANGNT MV KII+R
Sbjct: 431 PTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRA 490
Query: 334 IRALQGEEVVIDRDTWMKEAEIAEKAGS---------------------------DAEEC 366
I +L+ V I+R+ W+++AE ++AGS DA+ C
Sbjct: 491 ITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEEDRKHTWMEDADSC 550
Query: 367 KKRGSIETARAIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVL 426
++E ARAI+++A VF +KKS+WL+AA EK HG+RESL ALL++AV + P+AEVL
Sbjct: 551 VAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVL 610
Query: 427 WLMGAKEKWLAGDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERARMLLAKARD 486
WLMGAK KWLAGDVPAAR IL A+ PNSEEIWLAA KLE EN E ERAR LLAKAR
Sbjct: 611 WLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARS 670
Query: 487 MGGTERVWMKSAIVERELGNNAEERGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKE 546
T RV+MKS +E LGN + EE L+ + F LW+M GQ+EE+ ++ A+E
Sbjct: 671 SAPTARVFMKSVKLEWVLGNITAAQELCEEALRHYEDFPKLWMMKGQIEEQGELMERARE 730
Query: 547 AYQSGCNQCPNCIPLWYSLANLEEKRNGLNGLSKARAVLSVARLKNPLNPEIWLATIRAE 606
AY G +CP+ PLW L+ LEEK + L++ARA+L +RLKNP NP +WL ++R E
Sbjct: 731 AYNQGLKKCPHSTPLWLLLSRLEEK---IGQLTRARAILEKSRLKNPKNPGLWLESVRLE 787
Query: 607 SKHGNKKEADSFIAKALQKCPNSGILWAELIKMVPHHDRKSKGKDALVKSDRDPHVFAAV 666
+ G K A++ +AKALQ+CPNSGILW+E + + RK+K DAL K + DPHV AV
Sbjct: 788 YRAGLKNIANTLMAKALQECPNSGILWSEAVFLEARPQRKTKSVDALKKCEHDPHVLLAV 847
Query: 667 AKLFWHDRKVDKARNWFNKAVSLDPDTGDFWALYY 701
AKLFW +RK+ KAR WF++ V +D D GD WA +Y
Sbjct: 848 AKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFY 882
>sp|O94906|PRP6_HUMAN Pre-mRNA-processing factor 6 OS=Homo sapiens GN=PRPF6 PE=1 SV=1
Length = 941
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/755 (47%), Positives = 478/755 (63%), Gaps = 66/755 (8%)
Query: 10 YRYKNPTIREEFVDLKGKLTTVKAKEWERIPEIGDYSRSNKRK-RFESFVPVPDSLLQKA 68
YR + P I+++F DLK KL V +EW IPE+GD +R R+E PVPDS K
Sbjct: 131 YRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLTPVPDSFFAKH 190
Query: 69 RQEQQHVIALDPSSRAAGGAESVVT-----------------------DLTAVGEGRGKI 105
Q ++ ++DP GG + D+ +G+ R +
Sbjct: 191 LQTGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDMRKIGQARNTL 250
Query: 106 LTLKLDGISDSVTGLTVVDLSGYLTRMNDLKITTNSELRDILKARKIVRAIQ-------- 157
+ ++L +SDSV+G TVVD GYLT +N + T ++ DI KAR ++++++
Sbjct: 251 MDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKSVRETNPHHPP 310
Query: 158 ----AARLEELAKEEAAARKLITKGCNMCPKNEDVWLEACRLARPDEAKGVVAKGVRQIP 213
+ARLEE+ + AR LI KG MCPK+EDVWLEA RL D AK VVA+ VR +P
Sbjct: 311 AWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKAVVAQAVRHLP 370
Query: 214 KSVRLWLQAAELDHDKANKSRVLRMALDEIPDSVRLWKALVEISSEEEARILLHRAVECC 273
+SVR++++AAEL+ D K RVLR AL+ +P+SVRLWKA VE+ E+ARI+L RAVECC
Sbjct: 371 QSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDARIMLSRAVECC 430
Query: 274 PLDVELWLALARLETYGVARSVLNKARKKLPKERAIWIAAAKLEEANGNTSMVGKIIERG 333
P VELWLALARLETY AR VLNKAR+ +P +R IWI AAKLEEANGNT MV KII+R
Sbjct: 431 PTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRA 490
Query: 334 IRALQGEEVVIDRDTWMKEAEIAEKAGS---------------------------DAEEC 366
I +L+ V I+R+ W+++AE ++AGS DA+ C
Sbjct: 491 ITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEEDRKHTWMEDADSC 550
Query: 367 KKRGSIETARAIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVL 426
++E ARAI+++A VF +KKS+WL+AA EK HG+RESL ALL++AV + P+AEVL
Sbjct: 551 VAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVL 610
Query: 427 WLMGAKEKWLAGDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERARMLLAKARD 486
WLMGAK KWLAGDVPAAR IL A+ PNSEEIWLAA KLE EN E ERAR LLAKAR
Sbjct: 611 WLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENDEYERARRLLAKARS 670
Query: 487 MGGTERVWMKSAIVERELGNNAEERGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKE 546
T RV+MKS +E N + EE L+ + F LW+M GQ+EE+ +++A+E
Sbjct: 671 SAPTARVFMKSVKLEWVQDNIRAAQDLCEEALRHYEDFPKLWMMKGQIEEQKEMMEKARE 730
Query: 547 AYQSGCNQCPNCIPLWYSLANLEEKRNGLNGLSKARAVLSVARLKNPLNPEIWLATIRAE 606
AY G +CP+ PLW L+ LEEK + L++ARA+L +RLKNP NP +WL ++R E
Sbjct: 731 AYNQGLKKCPHSTPLWLLLSRLEEK---IGQLTRARAILEKSRLKNPKNPGLWLESVRLE 787
Query: 607 SKHGNKKEADSFIAKALQKCPNSGILWAELIKMVPHHDRKSKGKDALVKSDRDPHVFAAV 666
+ G K A++ +AKALQ+CPNSGILW+E I + R++K DAL K + DPHV AV
Sbjct: 788 YRAGLKNIANTLMAKALQECPNSGILWSEAIFLEARPQRRTKSVDALKKCEHDPHVLLAV 847
Query: 667 AKLFWHDRKVDKARNWFNKAVSLDPDTGDFWALYY 701
AKLFW RK+ KAR WF++ V +D D GD WA +Y
Sbjct: 848 AKLFWSQRKITKAREWFHRTVKIDSDLGDAWAFFY 882
>sp|Q5RCC2|PRP6_PONAB Pre-mRNA-processing factor 6 OS=Pongo abelii GN=PRPF6 PE=2 SV=1
Length = 941
Score = 669 bits (1725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/755 (47%), Positives = 474/755 (62%), Gaps = 66/755 (8%)
Query: 10 YRYKNPTIREEFVDLKGKLTTVKAKEWERIPEIGDYSRSNKRK-RFESFVPVPDSLLQKA 68
YR + P I+++F DLK KL V +EW IPE+GD +R R+E PVPDS K
Sbjct: 131 YRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLTPVPDSFFAKH 190
Query: 69 RQEQQHVIALDPSSRAAGGAESVVT-----------------------DLTAVGEGRGKI 105
Q ++ ++DP GG + D+ +G+ R +
Sbjct: 191 LQTGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDMRKIGQARNTL 250
Query: 106 LTLKLDGISDSVTGLTVVDLSGYLTRMNDLKITTNSELRDILKARKIVRAIQ-------- 157
+ ++L +SDSV+G TVVD GYLT +N + T ++ DI KAR ++++++
Sbjct: 251 MDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKSVRETNPHHPP 310
Query: 158 ----AARLEELAKEEAAARKLITKGCNMCPKNEDVWLEACRLARPDEAKGVVAKGVRQIP 213
+ARLEE+ + AR LI KG MCPK+EDVWLEA RL D AK VVA+ VR +P
Sbjct: 311 AWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKAVVAQAVRHLP 370
Query: 214 KSVRLWLQAAELDHDKANKSRVLRMALDEIPDSVRLWKALVEISSEEEARILLHRAVECC 273
+ VR++++AAEL+ D K RVLR AL+ +P+SVRLWKA VE+ E+ARI+L RAVECC
Sbjct: 371 QFVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDARIMLSRAVECC 430
Query: 274 PLDVELWLALARLETYGVARSVLNKARKKLPKERAIWIAAAKLEEANGNTSMVGKIIERG 333
P VELWLALARLETY AR VLNKAR+ +P +R IWI AAKLEEANGNT MV KII+R
Sbjct: 431 PTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRA 490
Query: 334 IRALQGEEVVIDRDTWMKEAEIAEKAGS---------------------------DAEEC 366
I +L+ V I+R+ W+++AE ++AGS DA+ C
Sbjct: 491 ITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEEDRKHTWMEDADSC 550
Query: 367 KKRGSIETARAIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVL 426
++E ARAI+++A VF +KKS+WL+AA K HG+RESL ALL++AV + P+AEVL
Sbjct: 551 VAHNALECARAIYAYALQVFPSKKSVWLRAAYFGKNHGTRESLEALLQRAVAHCPKAEVL 610
Query: 427 WLMGAKEKWLAGDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERARMLLAKARD 486
WLMGAK KWL GDVPAAR IL A+ PNSEEIWLAA KLE EN E ERAR LLAKAR
Sbjct: 611 WLMGAKSKWLTGDVPAARSILALAFQANPNSEEIWLAAVKLESENDEYERARRLLAKARS 670
Query: 487 MGGTERVWMKSAIVERELGNNAEERGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKE 546
T RV+MKS +E N + EE L+ + F LW+M GQ+EE+ +++A+E
Sbjct: 671 SAPTARVFMKSVKLEWVQDNIRAAQDLCEEALRHYEDFPKLWMMKGQIEEQKEMMEKARE 730
Query: 547 AYQSGCNQCPNCIPLWYSLANLEEKRNGLNGLSKARAVLSVARLKNPLNPEIWLATIRAE 606
AY G +CP+ PLW L+ LEEK + L++ RA+L +RLKNP NP +WL ++R E
Sbjct: 731 AYNQGLKKCPHSTPLWLLLSRLEEK---IGQLTRTRAILEKSRLKNPKNPGLWLESVRLE 787
Query: 607 SKHGNKKEADSFIAKALQKCPNSGILWAELIKMVPHHDRKSKGKDALVKSDRDPHVFAAV 666
+ G K A++ +AKALQ+CPNSGILW+E I + R++K DAL K + DPHV AV
Sbjct: 788 YRAGLKNIANTLMAKALQECPNSGILWSEAIFLEARPQRRTKSVDALKKCEHDPHVLLAV 847
Query: 667 AKLFWHDRKVDKARNWFNKAVSLDPDTGDFWALYY 701
AKLFW RK+ KAR WF++ V +D D GD WA +Y
Sbjct: 848 AKLFWSQRKITKAREWFHRTVKIDSDLGDAWAFFY 882
>sp|Q12381|PRP1_SCHPO Pre-mRNA-splicing factor prp1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=prp1 PE=1 SV=1
Length = 906
Score = 534 bits (1375), Expect = e-150, Method: Compositional matrix adjust.
Identities = 301/739 (40%), Positives = 434/739 (58%), Gaps = 53/739 (7%)
Query: 10 YRYKNPTIREEFVDLKGKLTTVKAKEWERIPEIGDYSRS--NKRKRFESFVPVPDSLLQK 67
Y +NP + +F DLK L+T+ ++W IPE GD +R K+ R E F D +L
Sbjct: 119 YEKENPKVSSQFADLKRGLSTLTDEDWNNIPEPGDLTRKKRTKQPRRERFYATSDFVLAS 178
Query: 68 ARQEQQHVIALDPSSRAAGGAES-----VVTDLTAVGEGRGKILTLKLDGISDSVTGLTV 122
AR E Q + ++A G E+ T+ +G R K+L +KL S ++T +
Sbjct: 179 ARNENQAISNFAVDTQA--GTETPDMNGTKTNFVEIGAARDKVLGIKLAQASSNLTSPST 236
Query: 123 VDLSGYLTRMNDLKITTNSELRDILKARKIVRAI------------QAARLEELAKEEAA 170
+D GYLT +N + ++L DI KARK+++++ AARLEE+A + +
Sbjct: 237 IDPKGYLTSLNSMVPKNANDLGDIRKARKLLQSVIETNPKHASGWVAAARLEEVANKLSQ 296
Query: 171 ARKLITKGCNMCPKNEDVWLEACRLARPDEAKGVVAKGVRQIPKSVRLWLQAAELDHDKA 230
A+ LI KGC C ++EDVWLEA RL EAK ++A V+++PKSV LWL+A +L++
Sbjct: 297 AQSLILKGCENCSRSEDVWLEAIRLHPAAEAKVIIANAVKKLPKSVTLWLEAEKLENQAQ 356
Query: 231 NKSRVLRMALDEIPDSVRLWKALVEISSE-EEARILLHRAVECCPLDVELWLALARLETY 289
+K R+++ AL+ P SV LWK V + E + ARILL RAVE P+ ++LWLALARLETY
Sbjct: 357 HKKRIIKKALEFNPTSVSLWKEAVNLEEEVDNARILLARAVELIPMSIDLWLALARLETY 416
Query: 290 GVARSVLNKARKKLPKERAIWIAAAKLEEANGNTSMVGKIIERGIRALQGEEVVIDRDTW 349
A+ VLNKAR+ + +WIAAA+LEE GN S V KI+ RG+ LQ ++ RD W
Sbjct: 417 ENAKKVLNKARQTIRTSHEVWIAAARLEEQQGNVSRVEKIMARGVSELQATGGMLQRDQW 476
Query: 350 MKEAEIAEKAGS---------------------------DAEECKKRGSIETARAIFSHA 382
+ EAE E G+ DA+ R I+ ARA+F+ +
Sbjct: 477 LSEAEKCETEGAVITAQAIINTCLGVGLDEEDQFDTWLDDAQSFIARKCIDCARAVFAFS 536
Query: 383 CTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVLWLMGAKEKWLAGDVPA 442
V+ + +WL+A +LEK +G+ ES+ ++L KAV P+AE+LWL+ AKE+ D+
Sbjct: 537 LRVYPKSEKLWLRAVELEKLYGTTESVCSILEKAVESCPKAEILWLLYAKERKNVNDIAG 596
Query: 443 ARDILQEAYATIPNSEEIWLAAFKLEFENRELERARMLLAKARDMGGTERVWMKSAIVER 502
AR+IL A+ NSEEIWLAA ++EF N E ERAR LLA+AR GTER+W KS +ER
Sbjct: 597 ARNILGRAFEYNSNSEEIWLAAVRIEFVNNENERARKLLARARIESGTERIWTKSISLER 656
Query: 503 ELGNNAEERGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSGCNQCPNCIPLW 562
L +E LK +P + L++M GQ+ E ++ A++AY +G CP IPLW
Sbjct: 657 ILDEKDRALQLLENALKIYPHYDKLYMMKGQIFEDKEQIELARDAYLAGTKVCPYSIPLW 716
Query: 563 YSLANLEEKRNGLNGLSKARAVLSVARLKNPLNPEIWLATIRAESKHGNKKEADSFIAKA 622
LA LEEK++ + +AR V A++KNP N +WL I+ E + GN + + +AKA
Sbjct: 717 LLLAKLEEKQSVI----RARVVFDRAKVKNPKNEFLWLELIKMELRAGNISQVRAALAKA 772
Query: 623 LQKCPNSGILWAELIKMVPHHDRKSKGKDALVKSDRDPHVFAAVAKLFWHDRKVDKARNW 682
LQ+CP+SG+LW E I + P RK++ DAL K + + H+ +A++ W ++K DKAR+W
Sbjct: 773 LQECPSSGLLWTEAIWLEPRAQRKTRATDALRKCEGNAHLLCTIARMLWLEKKADKARSW 832
Query: 683 FNKAVSLDPDTGDFWALYY 701
F KAV D D GD W +Y
Sbjct: 833 FLKAVKADQDNGDVWCWFY 851
>sp|P19735|PRP6_YEAST Pre-mRNA-splicing factor 6 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PRP6 PE=1 SV=1
Length = 899
Score = 241 bits (615), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 205/769 (26%), Positives = 337/769 (43%), Gaps = 110/769 (14%)
Query: 16 TIREEFVDLKGKLTTVKAKEWERIPEIGDYSRSNKRKRFESFVPVPDSLLQKARQEQQHV 75
++ +F DLK L V EW IP+ D++R NKR R + Q +
Sbjct: 99 NVKRQFADLKESLAAVTESEWMDIPDATDFTRRNKRNRIQE-------------QLNRKT 145
Query: 76 IALDPSSRAAGGAESVVTDLTAVGEGRGKILTLKLDGISDSVTGLT-------------- 121
A P S G DL + E R K+L ++D +++ LT
Sbjct: 146 YAA-PDSLIPGNV-----DLNKLTEEREKLLQSQID---ENLAQLTKNASNPIQVNKPNA 196
Query: 122 VVDLSGYLTRMNDLKITTNSE--LRDILKARKIVRA------------IQAARLEELAKE 167
D YL + + ++ + S+ L D+ K R I+++ I +ARLEE A++
Sbjct: 197 ATDALSYLKDLENDRVNSLSDATLEDLQKMRTILKSYRKADPTNPQGWIASARLEEKARK 256
Query: 168 EAAARKLITKGCNMCPKNEDVWLEACRLARPD--EAKGVVAKGVRQIPKSVRLWLQAAEL 225
+ A+K+I GC CP++ D+WLE RL D K +VA + P S LW +A +L
Sbjct: 257 FSVAKKIIENGCQECPRSSDIWLENIRLHESDVHYCKTLVATAINFNPTSPLLWFKAIDL 316
Query: 226 DHDKANKSRVLRMALDEIPDSVRLWKALVEISSEEEARI-LLHRAVECCPLDVELWLALA 284
+ NK RV+R AL EIP LWK V +++ I +L +A + P ++L A
Sbjct: 317 ESTTVNKYRVVRKALQEIPRDEGLWKLAVSFEADKAQVIKMLEKATQFIPQSMDLLTAYT 376
Query: 285 RLETYGVARSVLNKARKKLPKERAIWIAAAKLEEANGNTSMVGKII---ERGIRALQGEE 341
L++Y A+ LN RK LP+E IWI + LEE N V K++ + G+ L
Sbjct: 377 NLQSYHNAKMTLNSFRKILPQEPEIWIISTLLEERNNPDIPVDKLVSLLKEGLLELSKNG 436
Query: 342 VVIDRDTWMKEAEIAEKAGSDAEECK------------------KRGSIETARAIFSHA- 382
W+K AE A + C+ + +++ H+
Sbjct: 437 YKATLSAWLKRAEALNDAPNSNLTCQAIVYAILEWLRESGEYESELNNVDQILEKMPHSK 496
Query: 383 CTVFLTKKSI---------WLKAAQLEKTHGSRESLIALLRKAVTYFPQAEV-------- 425
+ + KK I W + +++ E L+A ++ + ++
Sbjct: 497 VQIAVLKKLIQWDPCDTVLWSRLKMATESYHKIEELLAFFQELLFQTKNSDDIRANMREK 556
Query: 426 ---LWLMGAKEKWLA--GDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERARML 480
L +M E W A GD ++ + P++ ++ KL + +L+ R
Sbjct: 557 SPGLLMMYVSEYWKAQKGDTRQTLVLIDQIIDFAPHNLDLRFFKIKLLGRSLQLDELRDF 616
Query: 481 LAKARD------MGGTERVWMKSAIVERELGNNAEERGFIEE-GLKRFPSFFNLWLMLGQ 533
+ + GTER++ K R N E F+ E LK FP +L LGQ
Sbjct: 617 FQQTFSSLEDFKISGTERLYYKYVNFLRYQDLNEEAIKFLNERCLKSFPICHKFFLQLGQ 676
Query: 534 LEERLGHLKEAKEAYQSGCNQCPNCIPLWYSLANLEEKRNGLNGLSKARAVLSVARLKNP 593
+ +G+++ ++E Y SG PNC LW SL+ ++E L +AR++L LKNP
Sbjct: 677 IYHSMGNIEMSRETYLSGTRLVPNCPLLWVSLSKIDEI--DLKNPVRARSILDRGLLKNP 734
Query: 594 LNPEIWLATIRAESKHGNKKEADSFIAKALQKCPNSGILWAELIKMVPHHDRKSKGK--- 650
+ ++A I+ E + GN +A+ + +ALQK P++ +LW E IK+ H ++ S K
Sbjct: 735 DDVLFYIAKIQMEIRLGNLDQAELLVTQALQKFPSNALLWVEQIKLFKHGNKSSLKKTIF 794
Query: 651 -DALVKSDRDPHVFAAVAKLFWHDRKVDKARNWFNKAVSLDPDTGDFWA 698
DAL ++ D V + F+ + + + + W +A+ GD W
Sbjct: 795 QDALRRTQNDHRVLLEIGVSFYAEAQYETSLKWLERALKKCSRYGDTWV 843
>sp|Q7SGD2|CLF1_NEUCR Pre-mRNA-splicing factor clf-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=clf-1 PE=3 SV=1
Length = 695
Score = 69.3 bits (168), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 103/269 (38%), Gaps = 15/269 (5%)
Query: 375 ARAIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVLWLMGAKEK 434
AR++F A V +W++ Q E + + LL +AVT P+ LW
Sbjct: 91 ARSVFERALDVHPNNTQLWIRYVQAEIKNRNINHARNLLDRAVTRLPRVTSLWYQYLYVM 150
Query: 435 WLAGDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERARMLLAKARDMGGTERVW 494
+ GD+P R + P+ E+ W A +LE E +RAR + + R W
Sbjct: 151 EMLGDIPGTRQVFDRWMKWQPD-EQAWSAYIRLEKRYGEFDRAREIFRAFTAVHPEPRTW 209
Query: 495 MKSAIVERELGNNAEERGFIEEGLKRFPSFFN-------LWLMLGQLEERLGHLKEAKEA 547
+K A E E G + R + ++ +++ + E RL + A+
Sbjct: 210 LKWAKFEEEYGTSDTVREVFQTAIQTIAETLGDDAVDERIFIAFARYEARLREYERARAI 269
Query: 548 YQSGCNQCP--NCIPLWYSLANLEEKRNGLNG-----LSKARAVLSVARLKNPLNPEIWL 600
Y+ G + P + L E++ G L+K R + +N N ++W
Sbjct: 270 YKFGLDNLPRSKSMTLHAHYTTFEKQFGDKEGVEDVILTKRRRLYEEQVKENAKNYDVWF 329
Query: 601 ATIRAESKHGNKKEADSFIAKALQKCPNS 629
R E G+ +A+ + P +
Sbjct: 330 DFARLEESGGDVDRTREVYERAIAQVPPT 358
Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 98/463 (21%), Positives = 179/463 (38%), Gaps = 87/463 (18%)
Query: 156 IQAARLEELAKEEAAARKLITKGCNMCPKNEDVWLEACRLA----RPDEAKGVVAKGVRQ 211
+Q A+ E KE A AR + + ++ P N +W+ + + A+ ++ + V +
Sbjct: 76 LQYAQWELEQKEFARARSVFERALDVHPNNTQLWIRYVQAEIKNRNINHARNLLDRAVTR 135
Query: 212 IPKSVRLWLQAAELDHDKANKSRVLRMALDEIPDSVRLWKALVEISSEEEARILLHRAVE 271
+P+ LW Q V+ M L +IP + R + R ++
Sbjct: 136 LPRVTSLWYQYL----------YVMEM-LGDIPGT----------------RQVFDRWMK 168
Query: 272 CCPLDVELWLALARLET-YG---VARSVLNKARKKLPKERAIWIAAAKLEEANGNTSMVG 327
P D + W A RLE YG AR + P+ R W+ AK EE G + V
Sbjct: 169 WQP-DEQAWSAYIRLEKRYGEFDRAREIFRAFTAVHPEPRT-WLKWAKFEEEYGTSDTVR 226
Query: 328 KIIERGIRALQ---GEEVVIDR--------DTWMKEAEIAE---KAGSDAEECKKRGSIE 373
++ + I+ + G++ V +R + ++E E A K G D K ++
Sbjct: 227 EVFQTAIQTIAETLGDDAVDERIFIAFARYEARLREYERARAIYKFGLDNLPRSKSMTLH 286
Query: 374 TARAIFSHAC-------TVFLTKK---------------SIWLKAAQLEKTHGSRESLIA 411
F V LTK+ +W A+LE++ G +
Sbjct: 287 AHYTTFEKQFGDKEGVEDVILTKRRRLYEEQVKENAKNYDVWFDFARLEESGGDVDRTRE 346
Query: 412 LLRKAVTYFPQAE---------VLWLMGAK-EKWLAGDVPAARDILQEAYATIPNSE--- 458
+ +A+ P + L+L A E+ D+ AR I IP+ +
Sbjct: 347 VYERAIAQVPPTQEKRHWRRYIFLFLFYAIWEERETKDIGRARQIYDTCLNLIPHKKFTF 406
Query: 459 -EIWLAAFKLEFENRELERARMLLAKARDMGGTERVWMKSAIVERELGNNAEERGFIEEG 517
++W+A E +L AR L +A M ++++ + ++E++L R E+
Sbjct: 407 AKVWVAKAHFEIRQGQLTTARKTLGRAIGMCPKDKIFKEYILLEQKLYEFERCRTLYEKH 466
Query: 518 LKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSGCNQCPNCIP 560
+ P+ W+ +LE L L+ + ++ +Q +P
Sbjct: 467 VMYNPANCQTWIKWAELERGLDDLERTRAIFELAVSQPILDMP 509
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 87/208 (41%), Gaps = 7/208 (3%)
Query: 427 WLMGAKEKWLAGDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERARMLLAKA-R 485
WL A+ + + AR + + A PN+ ++W+ + E +NR + AR LL +A
Sbjct: 75 WLQYAQWELEQKEFARARSVFERALDVHPNNTQLWIRYVQAEIKNRNINHARNLLDRAVT 134
Query: 486 DMGGTERVWMKSAIVERELGNNAEERGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAK 545
+ +W + V LG+ R + +K P W +LE+R G A+
Sbjct: 135 RLPRVTSLWYQYLYVMEMLGDIPGTRQVFDRWMKWQPD-EQAWSAYIRLEKRYGEFDRAR 193
Query: 546 EAYQSGCNQCPNCIPLWYSLANLEEKRNGLNGLSKA--RAVLSVARL--KNPLNPEIWLA 601
E +++ P W A EE+ + + + A+ ++A + ++ I++A
Sbjct: 194 EIFRAFTAVHPEP-RTWLKWAKFEEEYGTSDTVREVFQTAIQTIAETLGDDAVDERIFIA 252
Query: 602 TIRAESKHGNKKEADSFIAKALQKCPNS 629
R E++ + A + L P S
Sbjct: 253 FARYEARLREYERARAIYKFGLDNLPRS 280
>sp|Q5K654|CLF1_PARBR Pre-mRNA-splicing factor CLF1 OS=Paracoccidioides brasiliensis
GN=CLF1 PE=3 SV=1
Length = 677
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 111/265 (41%), Gaps = 11/265 (4%)
Query: 375 ARAIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVLWLMGAKEK 434
AR++F A V T +W++ + E + LL +AVT + + + LW +
Sbjct: 91 ARSVFERALDVDPTAVVLWIRYIEAEMKTRNINHARNLLDRAVTIYSRVDKLWYKYVYME 150
Query: 435 WLAGDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERARMLLAKARDMGGTERVW 494
+ G++P R + + + P+ E W A KLE E +R R + + + + W
Sbjct: 151 EMLGNIPGTRQVFERWMSWEPD-EGAWGAYIKLEKRYNEFDRVRAIFERFTVVHPEPKNW 209
Query: 495 MKSAIVERELGNNAEERGFIEEGLKRFPSFF---NLWLMLGQLEERLGHLKEAKEAYQSG 551
+K A E E G + R ++ F L++ + E +L + A+ Y+
Sbjct: 210 IKWARFEEEYGTSDMVREVYGLAIETLGEDFMDEKLFIAYARYEAKLKEFERARAIYKYA 269
Query: 552 CNQCPNC--IPLWYSLANLEEK---RNGLNG--LSKARAVLSVARLKNPLNPEIWLATIR 604
++ P + L + E++ R G+ LSK R +NP N +IW +R
Sbjct: 270 LDRLPRAKSVALHKAYTTFEKQFGDREGVEDVILSKRRVQYEEQIKENPKNYDIWFDFVR 329
Query: 605 AESKHGNKKEADSFIAKALQKCPNS 629
E G+ + +A+ + P S
Sbjct: 330 LEESSGDVERVRDVYERAIAQMPPS 354
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 170/465 (36%), Gaps = 115/465 (24%)
Query: 209 VRQIPKSVRLWLQAA--ELDHDKANKSR-VLRMALDEIPDSVRLWKALVEISSE----EE 261
VR+ S+ W++ A EL+ + ++R V ALD P +V LW +E +
Sbjct: 65 VRRNRISMNNWMRYAQWELEQKEFRRARSVFERALDVDPTAVVLWIRYIEAEMKTRNINH 124
Query: 262 ARILLHRAVECCPLDVELWLALARLE--------TYGV---------------ARSVLNK 298
AR LL RAV +LW +E T V A L K
Sbjct: 125 ARNLLDRAVTIYSRVDKLWYKYVYMEEMLGNIPGTRQVFERWMSWEPDEGAWGAYIKLEK 184
Query: 299 ARKKLPKERAI-------------WIAAAKLEEANGNTSMVGKIIERGIRALQGEEVVID 345
+ + RAI WI A+ EE G + MV ++ I L GE+
Sbjct: 185 RYNEFDRVRAIFERFTVVHPEPKNWIKWARFEEEYGTSDMVREVYGLAIETL-GED---- 239
Query: 346 RDTWMKEAEIAEKAGSDAEECKKRGSIETARAIFSHACTVFLTKKSIWLKAAQ--LEKTH 403
+M E A +A K E ARAI+ +A KS+ L A EK
Sbjct: 240 ---FMDEKLFIAYARYEA----KLKEFERARAIYKYALDRLPRAKSVALHKAYTTFEKQF 292
Query: 404 GSRESL--IALLRKAVTY------FPQAEVLWLMGAKEKWLAGDVPAARDILQEAYATIP 455
G RE + + L ++ V Y P+ +W + + +GDV RD+ + A A +P
Sbjct: 293 GDREGVEDVILSKRRVQYEEQIKENPKNYDIWFDFVRLEESSGDVERVRDVYERAIAQMP 352
Query: 456 NSEE------------------------------------------------IWLAAFKL 467
S+E IWL +
Sbjct: 353 PSQEKRHWRRYIYLWIFYALWEELEAKDMERAHQIYQECIRLIPHKKFTFAKIWLMKAQF 412
Query: 468 EFENRELERARMLLAKARDMGGTERVWMKSAIVERELGNNAEERGFIEEGLKRFPSFFNL 527
E +L+ AR L A ++++ +ER+L R E+ ++ PS
Sbjct: 413 EIRQMDLQAARKTLGHAIGACPKDKLFKGYIDLERQLFEFVRCRKLFEKQIEWSPSNCQA 472
Query: 528 WLMLGQLEERLGHLKEAKEAYQSGCNQCPNCIP--LWYSLANLEE 570
W+ +LE L + A+ Y+ G +Q +P LW S + EE
Sbjct: 473 WIKFAELERGLDDIDRARAIYELGISQPVLDMPELLWKSYIDFEE 517
>sp|Q5BDX1|CLF1_EMENI Pre-mRNA-splicing factor clf1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=clf1
PE=3 SV=2
Length = 673
Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 119/483 (24%), Positives = 185/483 (38%), Gaps = 86/483 (17%)
Query: 219 WLQAA--ELDHDKANKSR-VLRMALDEIPDSVRLWKALVEISSEE----EARILLHRAVE 271
W++ A EL+ + ++R + ALD SV LW +E AR LL RAV
Sbjct: 75 WMRYAAWELEQKEFRRARSIFERALDVDSTSVPLWIRYIESEMRNRNINHARNLLDRAVT 134
Query: 272 CCPLDVELWLALARL-ETYGV---ARSV-------------------LNKARKKLPKERA 308
P +LW + ET G R V L K + + RA
Sbjct: 135 ILPRVDKLWYKYVYMEETLGNIPGTRQVFERWMSWEPDEGAWSAYIKLEKRYNEFERARA 194
Query: 309 I-------------WIAAAKLEEANGNTSMVGKIIERGIRALQGEEVVIDRDTWMKEAEI 355
I WI A+ EE G + +V ++ + L GE+ +D ++ A
Sbjct: 195 IFQRFTIVHPEPRNWIKWARFEEEYGTSDLVREVYGLAVETL-GED-FMDEKLFIAYARF 252
Query: 356 AEKAGSDAEECKKRGSIETARAIFSHACTVFLTKKSIWLKAA--QLEKTHGSRESL--IA 411
K E ARAI+ +A KSI L A EK G RE + +
Sbjct: 253 ETKL----------KEYERARAIYKYALDRLPRSKSITLHKAYTTFEKQFGDREGVENVI 302
Query: 412 LLRKAVTYFPQAEV------LWLMGAKEKWLAGDVPAARDILQEAYATIPNSEE------ 459
L ++ V Y Q + +W A+ + +GD RD+ + A A IP S+E
Sbjct: 303 LAKRRVQYEEQLKENLRNYDVWFDFARLEEQSGDPERVRDVYERAIAQIPPSQEKRHWRR 362
Query: 460 -IWLAAFKL---EFENRELERARMLLAKARDMGGTE-----RVWMKSAIVERELGNNAEE 510
I+L F E E ++++RAR + + + + +VW+ A E N
Sbjct: 363 YIYLWIFYALWEEMEAKDIDRARQVYTECLKLIPHKKFTFAKVWLMKAQFEVRQLNLQAA 422
Query: 511 RGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSGCNQCPNCIPLWYSLANLEE 570
R + + + P L+ LE +L + Y+ P+ W A LE
Sbjct: 423 RKTLGQAIGMCPK-DKLFRGYIDLERQLFEFVRCRTLYEKQIEWNPSNSQSWIQYAELE- 480
Query: 571 KRNGLNGLSKARAVLSVARLKNPLN-PE-IWLATIRAESKHGNKKEADSFIAKALQKCPN 628
GL+ +ARA+ + + L+ PE +W A I E G + + LQK +
Sbjct: 481 --RGLDDTERARAIYELGIDQPTLDMPELVWKAYIDFEDDEGEYERERQLYERLLQKTDH 538
Query: 629 SGI 631
+
Sbjct: 539 VKV 541
Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 154/396 (38%), Gaps = 72/396 (18%)
Query: 262 ARILLHRAVECCPLDVELWLAL----ARLETYGVARSVLNKARKKLPKERAIWIAAAKLE 317
AR + RA++ V LW+ R AR++L++A LP+ +W +E
Sbjct: 91 ARSIFERALDVDSTSVPLWIRYIESEMRNRNINHARNLLDRAVTILPRVDKLWYKYVYME 150
Query: 318 EANGNTSMVGKIIERGIRALQGEEVVIDRDTWMKEAEIAEKAGSDAEECKKR-GSIETAR 376
E GN ++ ER WM E E A S + +KR E AR
Sbjct: 151 ETLGNIPGTRQVFER----------------WMS-WEPDEGAWSAYIKLEKRYNEFERAR 193
Query: 377 AIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQA---EVLWLMGAKE 433
AIF V ++ W+K A+ E+ +G+ + + + AV + E L++ A+
Sbjct: 194 AIFQRFTIVHPEPRN-WIKWARFEEEYGTSDLVREVYGLAVETLGEDFMDEKLFIAYARF 252
Query: 434 KWLAGDVPAARDILQEAYATIPNSEEIWL----AAFKLEFENRELERARMLLAKARDMGG 489
+ + AR I + A +P S+ I L F+ +F +RE G
Sbjct: 253 ETKLKEYERARAIYKYALDRLPRSKSITLHKAYTTFEKQFGDRE---------------G 297
Query: 490 TERVWMKSAIVERELGNNAEERGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQ 549
E V + A+ R EE LK +++W +LEE+ G + ++ Y+
Sbjct: 298 VENVIL------------AKRRVQYEEQLKENLRNYDVWFDFARLEEQSGDPERVRDVYE 345
Query: 550 SGCNQCP---------NCIPLWYSLANLEEKRNGLNGLSKARAV----LSVARLKNPLNP 596
Q P I LW A EE + +AR V L + K
Sbjct: 346 RAIAQIPPSQEKRHWRRYIYLWIFYALWEEME--AKDIDRARQVYTECLKLIPHKKFTFA 403
Query: 597 EIWLATIRAESKHGNKKEADSFIAKALQKCPNSGIL 632
++WL + E + N + A + +A+ CP +
Sbjct: 404 KVWLMKAQFEVRQLNLQAARKTLGQAIGMCPKDKLF 439
Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 106/476 (22%), Positives = 190/476 (39%), Gaps = 67/476 (14%)
Query: 159 ARLEELAKEEAAARKLITKGCNMCPKNEDVWLE--ACRLARPD--EAKGVVAKGVRQIPK 214
A LEEL + + RK N + W+ A L + + A+ + + +
Sbjct: 45 ADLEELHEYQGRKRKEFEDYVRRNRINMNNWMRYAAWELEQKEFRRARSIFERALDVDST 104
Query: 215 SVRLWLQA--AELDHDKANKSR-VLRMALDEIPDSVRLWKALVEISSE----EEARILLH 267
SV LW++ +E+ + N +R +L A+ +P +LW V + R +
Sbjct: 105 SVPLWIRYIESEMRNRNINHARNLLDRAVTILPRVDKLWYKYVYMEETLGNIPGTRQVFE 164
Query: 268 RAVECCPLDVELWLALARLET----YGVARSVLNKARKKLPKERAIWIAAAKLEEANGNT 323
R + P D W A +LE + AR++ + P+ R WI A+ EE G +
Sbjct: 165 RWMSWEP-DEGAWSAYIKLEKRYNEFERARAIFQRFTIVHPEPRN-WIKWARFEEEYGTS 222
Query: 324 SMVGKIIERGIRALQGEEVVIDR--------DTWMKEAEIAE---KAGSDAEECKKRGSI 372
+V ++ + L GE+ + ++ +T +KE E A K D K ++
Sbjct: 223 DLVREVYGLAVETL-GEDFMDEKLFIAYARFETKLKEYERARAIYKYALDRLPRSKSITL 281
Query: 373 ETARAIFSHAC-------TVFLTKK---------------SIWLKAAQLEKTHGSRESLI 410
A F V L K+ +W A+LE+ G E +
Sbjct: 282 HKAYTTFEKQFGDREGVENVILAKRRVQYEEQLKENLRNYDVWFDFARLEEQSGDPERVR 341
Query: 411 ALLRKAVTYFPQAE---------VLWLMGAK-EKWLAGDVPAARDILQEAYATIPNSE-- 458
+ +A+ P ++ LW+ A E+ A D+ AR + E IP+ +
Sbjct: 342 DVYERAIAQIPPSQEKRHWRRYIYLWIFYALWEEMEAKDIDRARQVYTECLKLIPHKKFT 401
Query: 459 --EIWLAAFKLEFENRELERARMLLAKARDMGGTERVWMKSAIVERELGNNAEERGFIEE 516
++WL + E L+ AR L +A M ++++ +ER+L R E+
Sbjct: 402 FAKVWLMKAQFEVRQLNLQAARKTLGQAIGMCPKDKLFRGYIDLERQLFEFVRCRTLYEK 461
Query: 517 GLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSGCNQCPNCIP--LWYSLANLEE 570
++ PS W+ +LE L + A+ Y+ G +Q +P +W + + E+
Sbjct: 462 QIEWNPSNSQSWIQYAELERGLDDTERARAIYELGIDQPTLDMPELVWKAYIDFED 517
>sp|Q4WT84|CLF1_ASPFU Pre-mRNA-splicing factor clf1 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=clf1 PE=3
SV=1
Length = 676
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 108/479 (22%), Positives = 191/479 (39%), Gaps = 73/479 (15%)
Query: 159 ARLEELAKEEAAARKLITKGCNMCPKNEDVW-------LEACRLARPDEAKGVVAKGVRQ 211
A LEEL + + RK N + W LE R A+ + + +
Sbjct: 45 ADLEELHEYQGRKRKEFEDYVRRNRLNMNNWMRYASWELEQKEFRR---ARSIFERALDV 101
Query: 212 IPKSVRLWLQA--AELDHDKANKSR-VLRMALDEIPDSVRLWKALVEISSE----EEARI 264
P SV LW++ +E+ + N +R +L A+ +P + W V + + R
Sbjct: 102 NPTSVVLWIRYIESEMRNRNINHARNLLDRAVTILPRVDKFWYKYVYMEETLGNIQGTRQ 161
Query: 265 LLHRAVECCPLDVELWLALARLET----YGVARSVLNKARKKLPKERAIWIAAAKLEEAN 320
+ R + P D W A +LE + AR++ + P+ R WI A+ EE
Sbjct: 162 VFERWMSWEP-DEGAWSAYIKLEKRYNEFERARAIFQRFTIVHPEPRN-WIKWARFEEEY 219
Query: 321 GNTSMVGKIIERGIRALQGEEVVIDR--------DTWMKEAEIAE---KAGSDAEECKKR 369
G + +V ++ I L GE+ + ++ + +KE E A K D K
Sbjct: 220 GTSDLVREVYGMAIETL-GEDFMDEKLFIAYAKFEAKLKEYERARAIYKYALDRLPRSKA 278
Query: 370 GSIETARAIFSHAC-------TVFLTKK---------------SIWLKAAQLEKTHGSRE 407
++ A F V L+K+ +W A+LE+T G +
Sbjct: 279 MALHKAYTTFEKQFGDREGVEDVILSKRRVQYEEQLKENPRNYDVWFDFARLEETSGDPD 338
Query: 408 SLIALLRKAVTYFPQAE---------VLWLMGAK-EKWLAGDVPAARDILQEAYATIPNS 457
+ + +A+ P ++ LW+ A E+ A DV AR I E IP+
Sbjct: 339 RVRDIYERAIAQIPPSQEKRHWRRYIYLWIFYAIWEEMEAKDVDRARQIYTECLKLIPHK 398
Query: 458 E----EIWLAAFKLEFENRELERARMLLAKARDMGGTERVWMKSAIVERELGNNAEERGF 513
+ +IWL + + +L+ AR L +A M ++++ +ER+L R
Sbjct: 399 KFTFAKIWLLKAQFDIRQMDLQAARKTLGQAIGMCPKDKLFRGYIDLERQLFEFVRCRTL 458
Query: 514 IEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSGCNQCPNCIP--LWYSLANLEE 570
E+ ++ P+ W+ +LE L + A+ ++ G +Q +P +W + + EE
Sbjct: 459 YEKQIEWNPANSQSWIKYAELERGLDDSERARAIFELGIDQPMLDMPELVWKAYIDFEE 517
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 101/280 (36%), Gaps = 43/280 (15%)
Query: 393 WLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVLWLMGAKEKWLAGDVPAARDILQEAYA 452
W++ A E ++ +A+ P + VLW+ + + ++ AR++L A
Sbjct: 75 WMRYASWELEQKEFRRARSIFERALDVNPTSVVLWIRYIESEMRNRNINHARNLLDRAVT 134
Query: 453 TIPNSEEIWL---------------------------------AAFKLEFENRELERARM 479
+P ++ W A KLE E ERAR
Sbjct: 135 ILPRVDKFWYKYVYMEETLGNIQGTRQVFERWMSWEPDEGAWSAYIKLEKRYNEFERARA 194
Query: 480 LLAKARDMGGTERVWMKSAIVERELGNNAEERGFIEEGLKRFPSFF---NLWLMLGQLEE 536
+ + + R W+K A E E G + R ++ F L++ + E
Sbjct: 195 IFQRFTIVHPEPRNWIKWARFEEEYGTSDLVREVYGMAIETLGEDFMDEKLFIAYAKFEA 254
Query: 537 RLGHLKEAKEAYQSGCNQCP--NCIPLWYSLANLEEK---RNGLNG--LSKARAVLSVAR 589
+L + A+ Y+ ++ P + L + E++ R G+ LSK R
Sbjct: 255 KLKEYERARAIYKYALDRLPRSKAMALHKAYTTFEKQFGDREGVEDVILSKRRVQYEEQL 314
Query: 590 LKNPLNPEIWLATIRAESKHGNKKEADSFIAKALQKCPNS 629
+NP N ++W R E G+ +A+ + P S
Sbjct: 315 KENPRNYDVWFDFARLEETSGDPDRVRDIYERAIAQIPPS 354
>sp|Q527H0|CLF1_MAGO7 Pre-mRNA-splicing factor CLF1 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=CLF1 PE=3 SV=1
Length = 691
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 113/521 (21%), Positives = 201/521 (38%), Gaps = 90/521 (17%)
Query: 161 LEELAKEEAAARKLITKGCNMCPKNEDVWLEACR--LARPDEAKG--VVAKGVRQIPKSV 216
LEEL + + RK C N WL+ + L + + A+ V + + V
Sbjct: 47 LEELHEYQGRKRKEFESYCQRSGFNLKNWLQYAQWELEQKEYARSRSVFERALNLHANKV 106
Query: 217 RLWLQA--AELDHDKANKSR-VLRMALDEIPDSVRLWKALVEI----SSEEEARILLHRA 269
LW++ AEL N +R +L A+ +P +LW V + + R + R
Sbjct: 107 TLWIRYVEAELKSRNINFARNLLDRAVTHLPRVDKLWYKYVWVEEMLGNIPGVRQVFERW 166
Query: 270 VECCPLDVELWLALARLET----YGVARSVLNKARKKLPKERAIWIAAAKLEEANGNTSM 325
+E P D W A +LE Y AR + + P+ R WI +K EE G +
Sbjct: 167 MEWQP-DEAAWSAFIKLEQRYGEYDRAREIFTRFTMVHPEPRN-WIKWSKFEEEYGTSDR 224
Query: 326 VGKIIERGIRALQGEEVVIDRDTWMKEAEIAEKAGSDAEECKKRGSIETARAIFSHACTV 385
V ++ ER I EE+ D +++E A +A K ++ ARAI+
Sbjct: 225 VREVFERAI-----EELSKYGDEFVEERLFIAYARYEA----KLHDLDRARAIYKFGLEN 275
Query: 386 FLTKKSIWL--KAAQLEKTHGSRESL--IALLRKAVTY------FPQAEVLWLMGAKEKW 435
K++ L + EK +G RE + + L ++ Y P+ +W A+ +
Sbjct: 276 LPRSKAMLLHKEYTTFEKQYGDREGVEDVVLSKRRRHYEDLVRENPKNYDVWFDYARLEE 335
Query: 436 LAGDVPAARDILQEAYATIPNSE------------------------------------- 458
+GD+ R++ ++A A +P ++
Sbjct: 336 ASGDIDRTREVYEKAIAQVPPTQAKRHWRRYIYLWIFFALWEETEAKNPERARQVYDTCL 395
Query: 459 -----------EIWLAAFKLEFENRELERARMLLAKARDMGGTERVWMKSAIVERELGNN 507
++W+ E +L AR L +A M +R++ +E++L
Sbjct: 396 KLIPHRTFTFAKVWMHKAHFEIRQGDLAAARKTLGRAIGMCPKDRLFKGYIEMEQKLYEF 455
Query: 508 AEERGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSGCNQCPNCIP--LWYSL 565
R E+ + P+ + W+ +LE L L A+ G Q +P +W S
Sbjct: 456 GRCRILYEKHIAYNPANCSTWVKWAELERGLDDLDRARAILDMGIAQPVLDMPEVVWKSY 515
Query: 566 ANLEEKRNGLNGLSKARAVLSVARLKNPLNPEIWLATIRAE 606
+ EE+ + K R++ L +P++W++ + E
Sbjct: 516 IDFEEEEGEYD---KTRSLYERL-LDKADHPKVWISYAQFE 552
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/393 (20%), Positives = 150/393 (38%), Gaps = 63/393 (16%)
Query: 262 ARILLHRAVECCPLDVELWLALARLE----TYGVARSVLNKARKKLPKERAIWIAAAKLE 317
+R + RA+ V LW+ E AR++L++A LP+ +W +E
Sbjct: 91 SRSVFERALNLHANKVTLWIRYVEAELKSRNINFARNLLDRAVTHLPRVDKLWYKYVWVE 150
Query: 318 EANGNTSMVGKIIERGIRALQGEEVVIDRDTWMKEAEIAEKAGSDAEECKKR-GSIETAR 376
E GN V ++ ER WM E + E A S + ++R G + AR
Sbjct: 151 EMLGNIPGVRQVFER----------------WM-EWQPDEAAWSAFIKLEQRYGEYDRAR 193
Query: 377 AIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQA------EVLWLMG 430
IF+ V ++ W+K ++ E+ +G+ + + + +A+ + E L++
Sbjct: 194 EIFTRFTMVHPEPRN-WIKWSKFEEEYGTSDRVREVFERAIEELSKYGDEFVEERLFIAY 252
Query: 431 AKEKWLAGDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERARMLLAKARDMGGT 490
A+ + D+ AR I + +P S+ + L FE + D G
Sbjct: 253 ARYEAKLHDLDRARAIYKFGLENLPRSKAMLLHKEYTTFEK-----------QYGDREGV 301
Query: 491 ERVWMKSAIVERELGNNAEERGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQS 550
E V + ++ R E+ ++ P +++W +LEE G + +E Y+
Sbjct: 302 EDVVL------------SKRRRHYEDLVRENPKNYDVWFDYARLEEASGDIDRTREVYEK 349
Query: 551 GCNQCP---------NCIPLWYSLANLEEK--RNGLNGLSKARAVLSVARLKNPLNPEIW 599
Q P I LW A EE +N L + + ++W
Sbjct: 350 AIAQVPPTQAKRHWRRYIYLWIFFALWEETEAKNPERARQVYDTCLKLIPHRTFTFAKVW 409
Query: 600 LATIRAESKHGNKKEADSFIAKALQKCPNSGIL 632
+ E + G+ A + +A+ CP +
Sbjct: 410 MHKAHFEIRQGDLAAARKTLGRAIGMCPKDRLF 442
Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 104/284 (36%), Gaps = 48/284 (16%)
Query: 393 WLKAAQLE-----------------KTHGSRESLIA-----------------LLRKAVT 418
WL+ AQ E H ++ +L LL +AVT
Sbjct: 75 WLQYAQWELEQKEYARSRSVFERALNLHANKVTLWIRYVEAELKSRNINFARNLLDRAVT 134
Query: 419 YFPQAEVLWLMGAKEKWLAGDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERAR 478
+ P+ + LW + + G++P R + + P+ E W A KLE E +RAR
Sbjct: 135 HLPRVDKLWYKYVWVEEMLGNIPGVRQVFERWMEWQPD-EAAWSAFIKLEQRYGEYDRAR 193
Query: 479 MLLAKARDMGGTERVWMKSAIVERELGNNAEERGFIEEGLKRFPSFFN------LWLMLG 532
+ + + R W+K + E E G + R E ++ + + L++
Sbjct: 194 EIFTRFTMVHPEPRNWIKWSKFEEEYGTSDRVREVFERAIEELSKYGDEFVEERLFIAYA 253
Query: 533 QLEERLGHLKEAKEAYQSGCNQCP--NCIPLWYSLANLEEKRNGLNG-----LSKARAVL 585
+ E +L L A+ Y+ G P + L E++ G LSK R
Sbjct: 254 RYEAKLHDLDRARAIYKFGLENLPRSKAMLLHKEYTTFEKQYGDREGVEDVVLSKRRRHY 313
Query: 586 SVARLKNPLNPEIWLATIRAESKHGNKKEADSFIAKALQKCPNS 629
+NP N ++W R E G+ KA+ + P +
Sbjct: 314 EDLVRENPKNYDVWFDYARLEEASGDIDRTREVYEKAIAQVPPT 357
>sp|Q9FNS4|MBB1_CHLRE PsbB mRNA maturation factor Mbb1, chloroplastic OS=Chlamydomonas
reinhardtii GN=MBB1 PE=2 SV=1
Length = 662
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 117/305 (38%), Gaps = 47/305 (15%)
Query: 443 ARDILQEAYATIPN-SEEIWLAAFKLEFENRELERARMLLAKARDMGGTER-VWMKSAIV 500
AR + Q+ A N + IW A LE +ERAR L A + GT W K ++
Sbjct: 180 ARQLYQDGCANTGNVNPYIWSAWGWLEARTGNVERARKLYDAAVVVDGTHACAWHKWGML 239
Query: 501 ERELGNNAEERGFIEEGLKRF---PSFFNLWLM--LGQLEERLGHLKEAKEAYQSGCNQC 555
E+ GN R +G++R P N +L LG + +LG + EA+ ++ G
Sbjct: 240 EKGQGNFTRARDLWMQGIQRCRRKPQSQNAYLYNALGCMAAQLGRVGEARSWFEEGTRSA 299
Query: 556 PNC--IPLWYSLANLEEK-----------RNGLNGLSKARAV-----------------L 585
+ LW + A LE K R L ++R V L
Sbjct: 300 EGAASVALWQAWAVLEAKQGDPTVVRYLFRKALGANPRSRYVHLAWALWERRQGNPQHCL 359
Query: 586 SVARLK---NPLNPEIWLATIRAESKHGNKKEADSFIAKALQKCPNSGILWAELIKMVPH 642
++ R NP +P ++ A E + G + A + L+ P+ +W M
Sbjct: 360 ALLRRGCELNPTDPALYQAWALVEKQAGRIERARELFEQGLRADPSDLYMWQAYGVMEAE 419
Query: 643 HDRKSKGK----DALVKSDRDP---HVFAAVAKLFWHDRKVDKARNWFNKAVSLDPDTGD 695
+ + + + R P +VF A L W V AR F AV +DP +
Sbjct: 420 QGNMDRARQLFQEGVWADPRSPSTVYVFHAWGALEWQAGNVQTARELFKAAVRVDPKSET 479
Query: 696 FWALY 700
WA +
Sbjct: 480 TWASW 484
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 118/285 (41%), Gaps = 18/285 (6%)
Query: 368 KRGSIETARAIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYF---PQAE 424
+ G++E AR ++ A V T W K LEK G+ L + + PQ++
Sbjct: 208 RTGNVERARKLYDAAVVVDGTHACAWHKWGMLEKGQGNFTRARDLWMQGIQRCRRKPQSQ 267
Query: 425 VLWLMGAKEKWLA--GDVPAARDILQEAYATIPNSEEI--WLAAFKLEFENRELERARML 480
+L A A G V AR +E + + + W A LE + + R L
Sbjct: 268 NAYLYNALGCMAAQLGRVGEARSWFEEGTRSAEGAASVALWQAWAVLEAKQGDPTVVRYL 327
Query: 481 LAKARDMGGTER---VWMKSAIVERELGNNAEERGFIEEGLKRFPSFFNLWLMLGQLEER 537
KA +G R V + A+ ER GN + G + P+ L+ +E++
Sbjct: 328 FRKA--LGANPRSRYVHLAWALWERRQGNPQHCLALLRRGCELNPTDPALYQAWALVEKQ 385
Query: 538 LGHLKEAKEAYQSGCNQCPNCIPLWYSLANLEEKRNGLNGLSKARAVLSVARLKNPLNPE 597
G ++ A+E ++ G P+ + +W + +E ++ ++ +AR + +P +P
Sbjct: 386 AGRIERARELFEQGLRADPSDLYMWQAYGVMEAEQGNMD---RARQLFQEGVWADPRSPS 442
Query: 598 ---IWLATIRAESKHGNKKEADSFIAKALQKCPNSGILWAELIKM 639
++ A E + GN + A A++ P S WA I M
Sbjct: 443 TVYVFHAWGALEWQAGNVQTARELFKAAVRVDPKSETTWASWIAM 487
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 78/204 (38%), Gaps = 30/204 (14%)
Query: 368 KRGSIETARAIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVLW 427
K+G R +F A + + L A E+ G+ + +ALLR+ P L+
Sbjct: 317 KQGDPTVVRYLFRKALGANPRSRYVHLAWALWERRQGNPQHCLALLRRGCELNPTDPALY 376
Query: 428 LMGAKEKWLAGDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERARMLLAKARDM 487
A + AG + AR++ ++ P+ +W A +E E ++RAR L
Sbjct: 377 QAWALVEKQAGRIERARELFEQGLRADPSDLYMWQAYGVMEAEQGNMDRARQLF------ 430
Query: 488 GGTERVWMKSAIVERELGNNAEERGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEA 547
E VW R PS ++ G LE + G+++ A+E
Sbjct: 431 --QEGVWAD----------------------PRSPSTVYVFHAWGALEWQAGNVQTAREL 466
Query: 548 YQSGCNQCPNCIPLWYSLANLEEK 571
+++ P W S +E +
Sbjct: 467 FKAAVRVDPKSETTWASWIAMESE 490
>sp|Q54XP4|CRNL1_DICDI Crooked neck-like protein 1 OS=Dictyostelium discoideum GN=crnkl1
PE=3 SV=1
Length = 705
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/436 (19%), Positives = 170/436 (38%), Gaps = 42/436 (9%)
Query: 156 IQAARLEELAKEEAAARKLITKGCNMCPKNEDVWLEACRLARPDE----AKGVVAKGVRQ 211
I+ A EE K+ AR + + ++ + VW++ + ++ A+ + + V
Sbjct: 79 IKYAAWEESQKDLTRARSVFERFLDIDHRIPTVWIKYAEMEMKNKNINLARNIWDRAVCL 138
Query: 212 IPKSVRLWLQAAELDHDKANK--SRVLRMALDEIPDSVRLWKALVEISSE----EEARIL 265
+P+ +LW + ++ N +R + + + W + ++ E R++
Sbjct: 139 LPRVSQLWFKYTFMEDMLGNYPAARAIFERWMQWKPEPQAWNSYLKFEQRLKLFENTRLI 198
Query: 266 LHRAVECCPLDVELWLALARLE----TYGVARSVLNKARKKLPKE---RAIWIAAAKLEE 318
+ + P ++ W+ + E AR++ +A + L ++ ++IA AK EE
Sbjct: 199 FEKYILVHPY-IKTWIKYTKFEERLGNIENARTIFQRAIEFLGEDGNDEQLFIAFAKFEE 257
Query: 319 ANGNTSMVGKIIERGIRALQGEEVVIDRDTWMK-EAEIAEKAG-SDAEECKKRGSIETAR 376
I + I + DT+ E + ++ G D KKR E
Sbjct: 258 KYKEIERARVIYKYAIDHVPKSRAKDLFDTFTNFEKQHGDRIGIEDVVLGKKRFQYEEEI 317
Query: 377 AIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQAE---------VLW 427
S IW ++E+ +G E + +++ P LW
Sbjct: 318 KKNSKNY-------DIWFDYLKMEEINGEIEKTREIYERSIGNLPPTNEKKHWKRYIYLW 370
Query: 428 LMGA-KEKWLAGDVPAARDILQEAYATIPNSE----EIWLAAFKLEFENRELERARMLLA 482
+ A E+ ++ D+ AR + E IP+ E +IW+ E L++AR++
Sbjct: 371 INYALFEELISKDMERARSVYSECIKLIPHKEFSFSKIWILYANFEIRQLNLDKARLIYG 430
Query: 483 KARDMGGTERVWMKSAIVERELGNNAEERGFIEEGLKRFPSFFNLWLMLGQLEERLGHLK 542
+A +++ + +E ELGN R E+ L+ P + W QLE LG
Sbjct: 431 QAIGRNPKSKIFDQYIHLEIELGNFDRVRTLYEKYLEIMPDNCDAWCKFAQLETELGETV 490
Query: 543 EAKEAYQSGCNQCPNC 558
A+ ++ Q PN
Sbjct: 491 RARAIFELAIQQ-PNL 505
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 99/260 (38%), Gaps = 35/260 (13%)
Query: 260 EEARILLHRAVECCPLD--VELWLALARLET-----YGVARSVLNKAR-------KKLPK 305
E AR++ A++ P +L+ E G+ VL K R KK K
Sbjct: 263 ERARVIYKYAIDHVPKSRAKDLFDTFTNFEKQHGDRIGIEDVVLGKKRFQYEEEIKKNSK 322
Query: 306 ERAIWIAAAKLEEANGNTSMVGKIIERGIRAL--QGEEVVIDRDT--WMKEAEIAEKAGS 361
IW K+EE NG +I ER I L E+ R W+ A E
Sbjct: 323 NYDIWFDYLKMEEINGEIEKTREIYERSIGNLPPTNEKKHWKRYIYLWINYALFEELISK 382
Query: 362 DAEECKKRGSIETARAIFSHACTVFLTKK----SIWLKAAQLEKTHGSRESLIALLRKAV 417
D +E AR+++S + K+ IW+ A E + + + +A+
Sbjct: 383 D---------MERARSVYSECIKLIPHKEFSFSKIWILYANFEIRQLNLDKARLIYGQAI 433
Query: 418 TYFPQAEVLWLMGAKEKWLAGDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERA 477
P++++ E L G+ R + ++ +P++ + W +LE E E RA
Sbjct: 434 GRNPKSKIFDQYIHLEIEL-GNFDRVRTLYEKYLEIMPDNCDAWCKFAQLETELGETVRA 492
Query: 478 RMLLAKARDMGGTER---VW 494
R + A +R VW
Sbjct: 493 RAIFELAIQQPNLDRPEVVW 512
>sp|Q9BZJ0|CRNL1_HUMAN Crooked neck-like protein 1 OS=Homo sapiens GN=CRNKL1 PE=1 SV=4
Length = 848
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 99/478 (20%), Positives = 191/478 (39%), Gaps = 51/478 (10%)
Query: 132 MNDLKITTNSELRDILKARKIVRA--IQAARLEELAKEEAAARKLITKGCNMCPKNEDVW 189
+ND K+ D ++ + V + I+ A+ EE KE AR + + ++ +N +W
Sbjct: 220 LNDYKLRKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLW 279
Query: 190 LEACRLA----RPDEAKGVVAKGVRQIPKSVRLWLQAAELDH---DKANKSRVLRMALDE 242
L+ + + + A+ + + + +P+ + W + ++ + A +V ++
Sbjct: 280 LKYAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEW 339
Query: 243 IPDSVRLWKALV--EISSEE--EARILLHRAVECCPLDVELWLALARLE----TYGVARS 294
P+ + W + + E+ +E AR + R V P DV+ W+ AR E + AR
Sbjct: 340 QPEE-QAWHSYINFELRYKEVDRARTIYERFVLVHP-DVKNWIKYARFEEKHAYFAHARK 397
Query: 295 VLNKARKKLPKERA---IWIAAAKLEEANGNTSMVGKIIERGIRALQGEEVVIDRDTWMK 351
V +A + E +++A AK EE V I + + + + D K
Sbjct: 398 VYERAVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQ----DAQELFK 453
Query: 352 EAEIAEKAGSDAEECKKRG--SIETARAIFSHACTVFLTKKSI--WLKAAQLEKTHGSRE 407
I EK D +RG I ++ F + V + W +L ++ E
Sbjct: 454 NYTIFEKKFGD-----RRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAE 508
Query: 408 SLIALLRKAVTYFPQAE---------VLWLMGA-KEKWLAGDVPAARDILQEAYATIPNS 457
++ + +A+ P + LW+ A E+ A D R + Q + IP+
Sbjct: 509 AVREVYERAIANVPPIQEKRHWKRYIYLWINYALYEELEAKDPERTRQVYQASLELIPHK 568
Query: 458 E----EIWLAAFKLEFENRELERARMLLAKARDMGGTERVWMKSAIVERELGNNAEERGF 513
+ ++W+ + E + L AR L + +++ +E +L R
Sbjct: 569 KFTFAKMWILYAQFEIRQKNLSLARRALGTSIGKCPKNKLFKVYIELELQLREFDRCRKL 628
Query: 514 IEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSGCNQCPNCIP--LWYSLANLE 569
E+ L+ P W+ +LE LG + A+ Y+ +Q +P LW S + E
Sbjct: 629 YEKFLEFGPENCTSWIKFAELETILGDIDRARAIYELAISQPRLDMPEVLWKSYIDFE 686
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 99/243 (40%), Gaps = 11/243 (4%)
Query: 372 IETARAIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVLWLMGA 431
I+ AR+I+ A V ++WLK A++E + + +A+T P+ W
Sbjct: 258 IQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYT 317
Query: 432 KEKWLAGDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERARMLLAKARDMGGTE 491
+ + G+V AR + + P E+ W + E +E++RAR + + +
Sbjct: 318 YMEEMLGNVAGARQVFERWMEWQP-EEQAWHSYINFELRYKEVDRARTIYERFVLVHPDV 376
Query: 492 RVWMKSAIVERELGNNAEERGFIEEGLKRFPSFF---NLWLMLGQLEERLGHLKEAKEAY 548
+ W+K A E + A R E ++ F +L++ + EE + + Y
Sbjct: 377 KNWIKYARFEEKHAYFAHARKVYERAVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIY 436
Query: 549 QSGCNQCP--NCIPLWYSLANLEEK---RNGLNGL--SKARAVLSVARLKNPLNPEIWLA 601
+ ++ + L+ + E+K R G+ + SK R NP N + W
Sbjct: 437 KYALDRISKQDAQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFD 496
Query: 602 TIR 604
+R
Sbjct: 497 YLR 499
Score = 33.1 bits (74), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 3/101 (2%)
Query: 511 RGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSGCNQCPNCIPLWYSLANLEE 570
R E+ +++ + + W+ Q EE L ++ A+ Y+ + I LW A +E
Sbjct: 228 RKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEM 287
Query: 571 KRNGLNGLSKARAVLSVARLKNPLNPEIWLATIRAESKHGN 611
K +N AR + A P + W E GN
Sbjct: 288 KNRQVN---HARNIWDRAITTLPRVNQFWYKYTYMEEMLGN 325
>sp|P63155|CRNL1_RAT Crooked neck-like protein 1 OS=Rattus norvegicus GN=Crnkl1 PE=2
SV=1
Length = 690
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 84/398 (21%), Positives = 145/398 (36%), Gaps = 76/398 (19%)
Query: 262 ARILLHRAVECCPLDVELWLALARLE----TYGVARSVLNKARKKLPKERAIWIAAAKLE 317
AR + RA++ ++ LWL A +E AR++ ++A LP+ W +E
Sbjct: 100 ARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYME 159
Query: 318 EANGNTSMVGKIIERGIRALQGEEVVIDRDTWMKEAEIAEKAGSDAEECKKR-GSIETAR 376
E GN + ++ ER WM E + E+A + R +E AR
Sbjct: 160 EMLGNVAGARQVFER----------------WM-EWQPEEQAWHSYINFELRYKEVERAR 202
Query: 377 AIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVLWLMGAKEKWL 436
I+ V K+ W+K A+ E+ H + +AV +F
Sbjct: 203 TIYERFVLVHPAVKN-WIKYARFEEKHAYFAHARKVYERAVEFF---------------- 245
Query: 437 AGDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERARMLLAKARD---MGGTERV 493
GD E +++A K E +E ER R++ A D + +
Sbjct: 246 -GDEHM--------------DEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEAQEL 290
Query: 494 WMKSAIVERELGNN--------AEERGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAK 545
+ I E++ G+ ++ R EE +K P ++ W +L E +
Sbjct: 291 FKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEADTVR 350
Query: 546 EAYQSGCNQCP---------NCIPLW--YSLANLEEKRNGLNGLSKARAVLSVARLKNPL 594
E Y+ P I LW Y+L E ++ +A L + K
Sbjct: 351 EVYERAIANVPPIQEKRHWKRYIYLWVNYALYEELEAKDPERTRQVYQASLELIPHKKFT 410
Query: 595 NPEIWLATIRAESKHGNKKEADSFIAKALQKCPNSGIL 632
++WL + E + N A + ++ KCP + +
Sbjct: 411 FAKMWLYYAQFEIRQKNLPFARRALGTSIGKCPKNKLF 448
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 97/478 (20%), Positives = 188/478 (39%), Gaps = 51/478 (10%)
Query: 132 MNDLKITTNSELRDILKARKIVRA--IQAARLEELAKEEAAARKLITKGCNMCPKNEDVW 189
+ND K+ D ++ + V + I+ A+ EE KE AR + + ++ +N +W
Sbjct: 59 LNDYKLRKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLW 118
Query: 190 LEACRLA----RPDEAKGVVAKGVRQIPKSVRLWLQAAELDH---DKANKSRVLRMALDE 242
L+ + + + A+ + + + +P+ + W + ++ + A +V ++
Sbjct: 119 LKYAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEW 178
Query: 243 IPDSVRLWKALVEIS----SEEEARILLHRAVECCPLDVELWLALARLE----TYGVARS 294
P+ + W + + E AR + R V P V+ W+ AR E + AR
Sbjct: 179 QPEE-QAWHSYINFELRYKEVERARTIYERFVLVHPA-VKNWIKYARFEEKHAYFAHARK 236
Query: 295 VLNKARKKLPKERA---IWIAAAKLEEANGNTSMVGKIIERGIRALQGEEVVIDRDTWMK 351
V +A + E +++A AK EE V I + + + +E K
Sbjct: 237 VYERAVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEA----QELFK 292
Query: 352 EAEIAEKAGSDAEECKKRG--SIETARAIFSHACTVFLTKKSI--WLKAAQLEKTHGSRE 407
I EK D +RG I ++ F + V + W +L ++ +
Sbjct: 293 NYTIFEKKFGD-----RRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAD 347
Query: 408 SLIALLRKAVTYFPQAE---------VLWLMGA-KEKWLAGDVPAARDILQEAYATIPNS 457
++ + +A+ P + LW+ A E+ A D R + Q + IP+
Sbjct: 348 TVREVYERAIANVPPIQEKRHWKRYIYLWVNYALYEELEAKDPERTRQVYQASLELIPHK 407
Query: 458 E----EIWLAAFKLEFENRELERARMLLAKARDMGGTERVWMKSAIVERELGNNAEERGF 513
+ ++WL + E + L AR L + +++ +E +L R
Sbjct: 408 KFTFAKMWLYYAQFEIRQKNLPFARRALGTSIGKCPKNKLFKGYIELELQLREFDRCRKL 467
Query: 514 IEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSGCNQCPNCIP--LWYSLANLE 569
E+ L+ P W+ +LE LG ++ A+ Y+ +Q +P LW S + E
Sbjct: 468 YEKFLEFGPENCTSWIKFAELETILGDIERARAIYELAISQPRLDMPEVLWKSYIDFE 525
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 98/243 (40%), Gaps = 11/243 (4%)
Query: 372 IETARAIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVLWLMGA 431
I+ AR+I+ A V ++WLK A++E + + +A+T P+ W
Sbjct: 97 IQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYT 156
Query: 432 KEKWLAGDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERARMLLAKARDMGGTE 491
+ + G+V AR + + P E+ W + E +E+ERAR + + +
Sbjct: 157 YMEEMLGNVAGARQVFERWMEWQP-EEQAWHSYINFELRYKEVERARTIYERFVLVHPAV 215
Query: 492 RVWMKSAIVERELGNNAEERGFIEEGLKRFPSFF---NLWLMLGQLEERLGHLKEAKEAY 548
+ W+K A E + A R E ++ F +L++ + EE + + Y
Sbjct: 216 KNWIKYARFEEKHAYFAHARKVYERAVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIY 275
Query: 549 QSGCNQCPN--CIPLWYSLANLEEK---RNGLNGL--SKARAVLSVARLKNPLNPEIWLA 601
+ ++ L+ + E+K R G+ + SK R NP N + W
Sbjct: 276 KYALDRISKQEAQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFD 335
Query: 602 TIR 604
+R
Sbjct: 336 YLR 338
Score = 33.5 bits (75), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 3/101 (2%)
Query: 511 RGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSGCNQCPNCIPLWYSLANLEE 570
R E+ +++ + + W+ Q EE L ++ A+ Y+ + I LW A +E
Sbjct: 67 RKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEM 126
Query: 571 KRNGLNGLSKARAVLSVARLKNPLNPEIWLATIRAESKHGN 611
K +N AR + A P + W E GN
Sbjct: 127 KNRQVNH---ARNIWDRAITTLPRVNQFWYKYTYMEEMLGN 164
>sp|P63154|CRNL1_MOUSE Crooked neck-like protein 1 OS=Mus musculus GN=Crnkl1 PE=2 SV=1
Length = 690
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 84/398 (21%), Positives = 145/398 (36%), Gaps = 76/398 (19%)
Query: 262 ARILLHRAVECCPLDVELWLALARLE----TYGVARSVLNKARKKLPKERAIWIAAAKLE 317
AR + RA++ ++ LWL A +E AR++ ++A LP+ W +E
Sbjct: 100 ARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYME 159
Query: 318 EANGNTSMVGKIIERGIRALQGEEVVIDRDTWMKEAEIAEKAGSDAEECKKR-GSIETAR 376
E GN + ++ ER WM E + E+A + R +E AR
Sbjct: 160 EMLGNVAGARQVFER----------------WM-EWQPEEQAWHSYINFELRYKEVERAR 202
Query: 377 AIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVLWLMGAKEKWL 436
I+ V K+ W+K A+ E+ H + +AV +F
Sbjct: 203 TIYERFVLVHPAVKN-WIKYARFEEKHAYFAHARKVYERAVEFF---------------- 245
Query: 437 AGDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERARMLLAKARD---MGGTERV 493
GD E +++A K E +E ER R++ A D + +
Sbjct: 246 -GDEHM--------------DEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEAQEL 290
Query: 494 WMKSAIVERELGNN--------AEERGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAK 545
+ I E++ G+ ++ R EE +K P ++ W +L E +
Sbjct: 291 FKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEADTVR 350
Query: 546 EAYQSGCNQCP---------NCIPLW--YSLANLEEKRNGLNGLSKARAVLSVARLKNPL 594
E Y+ P I LW Y+L E ++ +A L + K
Sbjct: 351 EVYERAIANVPPIQEKRHWKRYIYLWVNYALYEELEAKDPERTRQVYQASLELIPHKKFT 410
Query: 595 NPEIWLATIRAESKHGNKKEADSFIAKALQKCPNSGIL 632
++WL + E + N A + ++ KCP + +
Sbjct: 411 FAKMWLYYAQFEIRQKNLPFARRALGTSIGKCPKNKLF 448
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 97/478 (20%), Positives = 188/478 (39%), Gaps = 51/478 (10%)
Query: 132 MNDLKITTNSELRDILKARKIVRA--IQAARLEELAKEEAAARKLITKGCNMCPKNEDVW 189
+ND K+ D ++ + V + I+ A+ EE KE AR + + ++ +N +W
Sbjct: 59 LNDYKLRKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLW 118
Query: 190 LEACRLA----RPDEAKGVVAKGVRQIPKSVRLWLQAAELDH---DKANKSRVLRMALDE 242
L+ + + + A+ + + + +P+ + W + ++ + A +V ++
Sbjct: 119 LKYAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEW 178
Query: 243 IPDSVRLWKALVEIS----SEEEARILLHRAVECCPLDVELWLALARLE----TYGVARS 294
P+ + W + + E AR + R V P V+ W+ AR E + AR
Sbjct: 179 QPEE-QAWHSYINFELRYKEVERARTIYERFVLVHPA-VKNWIKYARFEEKHAYFAHARK 236
Query: 295 VLNKARKKLPKERA---IWIAAAKLEEANGNTSMVGKIIERGIRALQGEEVVIDRDTWMK 351
V +A + E +++A AK EE V I + + + +E K
Sbjct: 237 VYERAVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEA----QELFK 292
Query: 352 EAEIAEKAGSDAEECKKRG--SIETARAIFSHACTVFLTKKSI--WLKAAQLEKTHGSRE 407
I EK D +RG I ++ F + V + W +L ++ +
Sbjct: 293 NYTIFEKKFGD-----RRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAD 347
Query: 408 SLIALLRKAVTYFPQAE---------VLWLMGA-KEKWLAGDVPAARDILQEAYATIPNS 457
++ + +A+ P + LW+ A E+ A D R + Q + IP+
Sbjct: 348 TVREVYERAIANVPPIQEKRHWKRYIYLWVNYALYEELEAKDPERTRQVYQASLELIPHK 407
Query: 458 E----EIWLAAFKLEFENRELERARMLLAKARDMGGTERVWMKSAIVERELGNNAEERGF 513
+ ++WL + E + L AR L + +++ +E +L R
Sbjct: 408 KFTFAKMWLYYAQFEIRQKNLPFARRALGTSIGKCPKNKLFKGYIELELQLREFDRCRKL 467
Query: 514 IEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSGCNQCPNCIP--LWYSLANLE 569
E+ L+ P W+ +LE LG ++ A+ Y+ +Q +P LW S + E
Sbjct: 468 YEKFLEFGPENCTSWIKFAELETILGDIERARAIYELAISQPRLDMPEVLWKSYIDFE 525
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 98/243 (40%), Gaps = 11/243 (4%)
Query: 372 IETARAIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVLWLMGA 431
I+ AR+I+ A V ++WLK A++E + + +A+T P+ W
Sbjct: 97 IQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYT 156
Query: 432 KEKWLAGDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERARMLLAKARDMGGTE 491
+ + G+V AR + + P E+ W + E +E+ERAR + + +
Sbjct: 157 YMEEMLGNVAGARQVFERWMEWQP-EEQAWHSYINFELRYKEVERARTIYERFVLVHPAV 215
Query: 492 RVWMKSAIVERELGNNAEERGFIEEGLKRFPSFF---NLWLMLGQLEERLGHLKEAKEAY 548
+ W+K A E + A R E ++ F +L++ + EE + + Y
Sbjct: 216 KNWIKYARFEEKHAYFAHARKVYERAVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIY 275
Query: 549 QSGCNQCPN--CIPLWYSLANLEEK---RNGLNGL--SKARAVLSVARLKNPLNPEIWLA 601
+ ++ L+ + E+K R G+ + SK R NP N + W
Sbjct: 276 KYALDRISKQEAQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFD 335
Query: 602 TIR 604
+R
Sbjct: 336 YLR 338
Score = 33.5 bits (75), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 3/101 (2%)
Query: 511 RGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSGCNQCPNCIPLWYSLANLEE 570
R E+ +++ + + W+ Q EE L ++ A+ Y+ + I LW A +E
Sbjct: 67 RKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEM 126
Query: 571 KRNGLNGLSKARAVLSVARLKNPLNPEIWLATIRAESKHGN 611
K +N AR + A P + W E GN
Sbjct: 127 KNRQVNH---ARNIWDRAITTLPRVNQFWYKYTYMEEMLGN 164
>sp|P87312|CLF1_SCHPO Pre-mRNA-splicing factor cwf4 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cwf4 PE=1 SV=1
Length = 674
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 83/414 (20%), Positives = 155/414 (37%), Gaps = 80/414 (19%)
Query: 262 ARILLHRAVECCPLDVELWLALARLE----TYGVARSVLNKARKKLPKERAIWIAAAKLE 317
AR + RA++ + LWL E AR++ ++A +LP+ +W +E
Sbjct: 89 ARSVFERALDVDSTYIPLWLKYIECEMKNRNINHARNLFDRAVTQLPRVDKLWYKYVYME 148
Query: 318 EANGNTSMVGKIIERGIRALQGEEVVIDRDTWMKEAEIAEKAGSDAEECKKRGSIETARA 377
E GN + ++ ER ++ D + WM + + + E AR
Sbjct: 149 EMLGNITGCRQVFERWLKWEP------DENCWMSYIRMERRYHEN----------ERARG 192
Query: 378 IFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVLWLMGAKEKWLA 437
I+ V + + WL+ A+ E+ G+ ++ ++ +LA
Sbjct: 193 IYERFVVVH-PEVTNWLRWARFEEECGNAANV----------------------RQVYLA 229
Query: 438 GDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERARMLLAKARDM---GGTERVW 494
++ L E + ++A K E +E ERAR + A D + ++
Sbjct: 230 AIDALGQEFLNERF---------FIAFAKFEIRQKEYERARTIFKYAIDFMPRSKSMELY 280
Query: 495 MKSAIVERELGNNA--------EERGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKE 546
+ E++ G++ + R E+ LK P ++ WL L +LEE G + +E
Sbjct: 281 KEYTHFEKQFGDHLGVESTVLDKRRLQYEKLLKDSPYDYDTWLDLLKLEESAGDINTIRE 340
Query: 547 AYQSGCNQCPNCIP---------LWYSLANLEEKRNGLNGLSKARAV----LSVARLKNP 593
Y+ + P + +W + EE + + +AR V L + K
Sbjct: 341 TYEKAIAKVPEVVEKNAWRRYVYIWLNYCLFEEI--DVKDVDRARKVYQEALKLIPHKKF 398
Query: 594 LNPEIWLATIRAESKHGNKKEADSFIAKALQKCPNSGIL--WAELIKMVPHHDR 645
++WL E + A + +AL CP + + E + DR
Sbjct: 399 TFAKLWLMYAMFELRQRKIDVARKTLGRALGMCPKPKLFRGYIEFEDAIKQFDR 452
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 104/481 (21%), Positives = 178/481 (37%), Gaps = 51/481 (10%)
Query: 166 KEEAAARKLITKGCNMCPKNEDVWLEA--CRLARPD--EAKGVVAKGVRQIPKSVRLWLQ 221
KE A AR + + ++ +WL+ C + + A+ + + V Q+P+ +LW +
Sbjct: 84 KEFARARSVFERALDVDSTYIPLWLKYIECEMKNRNINHARNLFDRAVTQLPRVDKLWYK 143
Query: 222 AAELDHDKANKS---RVLRMALDEIPDSVRLWKALVEI----SSEEEARILLHRAVECCP 274
++ N + +V L PD W + + + E AR + R V P
Sbjct: 144 YVYMEEMLGNITGCRQVFERWLKWEPDE-NCWMSYIRMERRYHENERARGIYERFVVVHP 202
Query: 275 LDVELWLALARLE----TYGVARSVLNKARKKLPKE---RAIWIAAAKLEEANGNTSMVG 327
+V WL AR E R V A L +E +IA AK E
Sbjct: 203 -EVTNWLRWARFEEECGNAANVRQVYLAAIDALGQEFLNERFFIAFAKFEIRQKEYERAR 261
Query: 328 KIIERGIRAL-QGEEVVIDRDTWMKEAEIAEKAGSDAEECKKRGSIETARAIFSHACTVF 386
I + I + + + + + ++ E + + G ++ KR R +
Sbjct: 262 TIFKYAIDFMPRSKSMELYKEYTHFEKQFGDHLGVESTVLDKR------RLQYEKLLKDS 315
Query: 387 LTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQAE---------VLWL-MGAKEKWL 436
WL +LE++ G ++ KA+ P+ +WL E+
Sbjct: 316 PYDYDTWLDLLKLEESAGDINTIRETYEKAIAKVPEVVEKNAWRRYVYIWLNYCLFEEID 375
Query: 437 AGDVPAARDILQEAYATIPNSE----EIWLAAFKLEFENRELERARMLLAKARDMGGTER 492
DV AR + QEA IP+ + ++WL E R+++ AR L +A M +
Sbjct: 376 VKDVDRARKVYQEALKLIPHKKFTFAKLWLMYAMFELRQRKIDVARKTLGRALGMCPKPK 435
Query: 493 VWMKSAIVERELGNNAEERGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSGC 552
++ E + R E+ + P WL LE +LG A+ Y
Sbjct: 436 LFRGYIEFEDAIKQFDRCRILYEKWILYDPEACAPWLGYAALETKLGDSDRARALYNLAV 495
Query: 553 NQ----CPNCIPLWYSLANLEEKRNGLNGLSKARAVLSVARLKNPLNPEIWLATIRAESK 608
NQ P + Y EE G KAR++ L+ + ++W++ E
Sbjct: 496 NQPILETPELVWKAYIDFEFEEMEYG-----KARSIYQQL-LRTAPHVKVWISFANFEIA 549
Query: 609 H 609
H
Sbjct: 550 H 550
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 76/204 (37%), Gaps = 10/204 (4%)
Query: 494 WMKSAIVERELGNNAEERGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSGCN 553
WM+ E + A R E L ++ LWL + E + ++ A+ +
Sbjct: 73 WMRYGQWELDQKEFARARSVFERALDVDSTYIPLWLKYIECEMKNRNINHARNLFDRAVT 132
Query: 554 QCPNCIPLWYSLANLEEKRNGLNGLSKARAVLSVARLKNPLNPEIWLATIRAESKHGNKK 613
Q P LWY +EE + G R V LK + W++ IR E ++ +
Sbjct: 133 QLPRVDKLWYKYVYMEEMLGNITG---CRQVFE-RWLKWEPDENCWMSYIRMERRYHENE 188
Query: 614 EADSFIAKALQKCP--NSGILWAELIKMVPHHDRKSK----GKDALVKSDRDPHVFAAVA 667
A + + P + + WA + + + DAL + + F A A
Sbjct: 189 RARGIYERFVVVHPEVTNWLRWARFEEECGNAANVRQVYLAAIDALGQEFLNERFFIAFA 248
Query: 668 KLFWHDRKVDKARNWFNKAVSLDP 691
K ++ ++AR F A+ P
Sbjct: 249 KFEIRQKEYERARTIFKYAIDFMP 272
Score = 33.9 bits (76), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 51/138 (36%), Gaps = 6/138 (4%)
Query: 514 IEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSGCNQCPNCIPLWYSLANLEEKRN 573
E+ ++R W+ GQ E A+ ++ + IPLW E K
Sbjct: 59 FEDAIRRNRLAMGHWMRYGQWELDQKEFARARSVFERALDVDSTYIPLWLKYIECEMKNR 118
Query: 574 GLNGLSKARAVLSVARLKNPLNPEIWLATIRAESKHGNKKEADSFIAKALQKCPNSGILW 633
+N AR + A + P ++W + E GN + L+ P+ W
Sbjct: 119 NIN---HARNLFDRAVTQLPRVDKLWYKYVYMEEMLGNITGCRQVFERWLKWEPDENC-W 174
Query: 634 AELIKMV--PHHDRKSKG 649
I+M H + +++G
Sbjct: 175 MSYIRMERRYHENERARG 192
>sp|Q54VF4|Y8236_DICDI TPR-containing protein DDB_G0280363 OS=Dictyostelium discoideum
GN=DDB_G0280363 PE=4 SV=2
Length = 1304
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 104/247 (42%), Gaps = 8/247 (3%)
Query: 392 IWLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVLWLMGAKEKWLAGDVPAARDILQEAY 451
++L+ A L + + RK + P WL AK + G + + ILQ
Sbjct: 771 VYLELADLANRQNNLKLARKFYRKVTSTQPYISQGWLEYAKMEEDYGRLEKCQKILQLGL 830
Query: 452 ATIPNSEEIWLAAFKLEFENRELERARMLLAKARDMG--GTERVWMKSAIVERELGNNAE 509
P +E + + + E + LE AR LL++ RD T R M+ ++E GN
Sbjct: 831 KHCPFNESLLIKGIRHEEKMDNLEGARALLSQLRDQSIYKTWRAVMEGGLLEARAGNIDV 890
Query: 510 ERGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSGCNQCPNCIPLWYSLANLE 569
R + +K P + ++ +LEER + A + G + P PLW+S L
Sbjct: 891 ARKIFKYLMKHVPWYGPIYQEAYKLEERCEEYERAINIVEKGLFEDPKYGPLWFSALRLY 950
Query: 570 EK-RNGLNGLSKARAVLSVAR--LKNPLNPEIWLATIRAESKHGNKKEADSFIAKALQKC 626
EK +G L R + AR + + +I+ + E + N + + K+++ C
Sbjct: 951 EKTSHGF--LQSTRNTVERARQAVSREVTWKIYFEAAQIEERSKNLTLSRAAYVKSVELC 1008
Query: 627 PNSGILW 633
P +LW
Sbjct: 1009 P-ENLLW 1014
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 105/517 (20%), Positives = 203/517 (39%), Gaps = 85/517 (16%)
Query: 225 LDHDKANKSRVLRMALDEIPDSVRLWKALVE---ISSEEEARILLHRAVECCPLDVE--- 278
++H K + R L E P S + +K ++ + +E I + A + + E
Sbjct: 709 VNHSKPPPNESKRGELVESPVSKQQYKHFIKQFKLKEKEGLEIAMEFAFQSLSVLPEKVH 768
Query: 279 --LWLALA----RLETYGVARSVLNKARKKLPKERAIWIAAAKLEEANGNTSMVGKIIER 332
++L LA R +AR K P W+ AK+EE G KI++
Sbjct: 769 WRVYLELADLANRQNNLKLARKFYRKVTSTQPYISQGWLEYAKMEEDYGRLEKCQKILQL 828
Query: 333 GIRA--------------------LQGEEVVID--RDTWMKEAEIAEKAGSDAEECKKRG 370
G++ L+G ++ RD + + A G E + G
Sbjct: 829 GLKHCPFNESLLIKGIRHEEKMDNLEGARALLSQLRDQSIYKTWRAVMEGGLLE--ARAG 886
Query: 371 SIETARAIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVLWLMG 430
+I+ AR IF + I+ +A +LE+ E I ++ K + P+ LW
Sbjct: 887 NIDVARKIFKYLMKHVPWYGPIYQEAYKLEERCEEYERAINIVEKGLFEDPKYGPLWFSA 946
Query: 431 AK--EKWLAGDVPAARDILQEAYATIPN--SEEIWLAAFKLEFENRELERARMLLAKARD 486
+ EK G + + R+ ++ A + + +I+ A ++E ++ L +R K+ +
Sbjct: 947 LRLYEKTSHGFLQSTRNTVERARQAVSREVTWKIYFEAAQIEERSKNLTLSRAAYVKSVE 1006
Query: 487 MGGTE---RVWMKSAIVERELGNNAEERGFIEEGLKRFPSFFNLWLML--GQLEERLGHL 541
+ +VW+ + E N R + L+ PS ++L +LEE G+
Sbjct: 1007 LCPENLLWKVWLGGSRTELNADNICIARKLVFRALEEVPSKLRSLVLLEYSRLEEYAGN- 1065
Query: 542 KEAKEAYQSGCNQCPNCIPLWYSLANLEEKRNGLNGLSKARAVLSVARLKNPLNPEIWLA 601
++K+R +L +A ++ L+ +++L
Sbjct: 1066 ------------------------------------INKSRRILKMAHVEARLDWKVFLE 1089
Query: 602 TIRAESKHGNKKEADSFIAKALQKCPNSGILWAELIKMVPHHDRKSK---GKDALVKSDR 658
++ E + N + A ++L+ +G LWA LI++ KS+ K AL +
Sbjct: 1090 SVLLEMRANNYEAAIKEAKESLKIHSGAGRLWAALIQLNQLKGVKSQLNVFKKALQFVPK 1149
Query: 659 DPHVFAAVAKLFWHDRKVDKARNWFNKAVSLDPDTGD 695
V+ A++ ++ ++ +AR + A+ P GD
Sbjct: 1150 SGEVWCEGARIALNNNELREARRFLEFAIQFTPQFGD 1186
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 151/354 (42%), Gaps = 45/354 (12%)
Query: 141 SELRD--ILKARKIVRAIQAARLEELAKEEAAARKLITKGCNMCPKNEDVWLEACRLARP 198
S+LRD I K + V ++ LE A ARK+ P ++ EA +L
Sbjct: 861 SQLRDQSIYKTWRAV--MEGGLLEARAGNIDVARKIFKYLMKHVPWYGPIYQEAYKLEER 918
Query: 199 DE----AKGVVAKGVRQIPKSVRLWLQAAEL----DHDKANKSR-VLRMALDEIPDSVRL 249
E A +V KG+ + PK LW A L H +R + A + V
Sbjct: 919 CEEYERAINIVEKGLFEDPKYGPLWFSALRLYEKTSHGFLQSTRNTVERARQAVSREV-T 977
Query: 250 WKALVEISSEEE-------ARILLHRAVECCPLDV--ELWLALARLETYG----VARSVL 296
WK E + EE +R ++VE CP ++ ++WL +R E +AR ++
Sbjct: 978 WKIYFEAAQIEERSKNLTLSRAAYVKSVELCPENLLWKVWLGGSRTELNADNICIARKLV 1037
Query: 297 NKARKKLPKE--RAIWIAAAKLEEANGNTSMVGKIIERGIRALQGEEVVIDRDTWMKEAE 354
+A +++P + + + ++LEE GN + +I++ + E +D ++ E+
Sbjct: 1038 FRALEEVPSKLRSLVLLEYSRLEEYAGNINKSRRILK-----MAHVEARLDWKVFL-ESV 1091
Query: 355 IAEKAGSDAEECKKRGSIETARAIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLR 414
+ E ++ E K E ++ H+ +W QL + G + S + + +
Sbjct: 1092 LLEMRANNYEAAIK----EAKESLKIHSGA-----GRLWAALIQLNQLKGVK-SQLNVFK 1141
Query: 415 KAVTYFPQAEVLWLMGAKEKWLAGDVPAARDILQEAYATIPNSEEIWLAAFKLE 468
KA+ + P++ +W GA+ ++ AR L+ A P + ++ +LE
Sbjct: 1142 KALQFVPKSGEVWCEGARIALNNNELREARRFLEFAIQFTPQFGDSFIELLRLE 1195
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 97/460 (21%), Positives = 176/460 (38%), Gaps = 83/460 (18%)
Query: 239 ALDEIPDSV--RLWKALVEISSEEE----ARILLHRAVECCPLDVELWLALARLE-TYG- 290
+L +P+ V R++ L ++++ + AR + P + WL A++E YG
Sbjct: 759 SLSVLPEKVHWRVYLELADLANRQNNLKLARKFYRKVTSTQPYISQGWLEYAKMEEDYGR 818
Query: 291 --VARSVLNKARKKLPKERAIWIAAAKLEEANGNTSMVGKIIERGIRALQGEEVVIDRDT 348
+ +L K P ++ I + EE N G RAL + + D+
Sbjct: 819 LEKCQKILQLGLKHCPFNESLLIKGIRHEEKMDNL--------EGARALLSQ--LRDQSI 868
Query: 349 WMKEAEIAEKAGSDAEECKKRGSIETARAIFSHACTVFLTKKSIWLKAAQLEKTHGSRES 408
+ + E +A + G+I+ AR IF + I+ +A +LE+ E
Sbjct: 869 YKTWRAVMEGGLLEA----RAGNIDVARKIFKYLMKHVPWYGPIYQEAYKLEERCEEYER 924
Query: 409 LIALLRKAVTYFPQAEVLWLMGAK--EKWLAGDVPAARDILQEAYATIPN--SEEIWLAA 464
I ++ K + P+ LW + EK G + + R+ ++ A + + +I+ A
Sbjct: 925 AINIVEKGLFEDPKYGPLWFSALRLYEKTSHGFLQSTRNTVERARQAVSREVTWKIYFEA 984
Query: 465 FKLEFENRELERARMLLAKARDMGGTE---RVWMKSAIVERELGNNAEERGFIEEGLKRF 521
++E ++ L +R K+ ++ +VW+ + E N R + L+
Sbjct: 985 AQIEERSKNLTLSRAAYVKSVELCPENLLWKVWLGGSRTELNADNICIARKLVFRALEEV 1044
Query: 522 PSFFNLWLML--GQLEERLGHL-------------------------------------- 541
PS ++L +LEE G++
Sbjct: 1045 PSKLRSLVLLEYSRLEEYAGNINKSRRILKMAHVEARLDWKVFLESVLLEMRANNYEAAI 1104
Query: 542 KEAKEAY--QSGCNQCPNCIPLWYSLANLEEKRNGLNGLSKARAVLSVARLKNPLNPEIW 599
KEAKE+ SG + LW +L L N L G+ V A P + E+W
Sbjct: 1105 KEAKESLKIHSGAGR------LWAALIQL----NQLKGVKSQLNVFKKALQFVPKSGEVW 1154
Query: 600 LATIRAESKHGNKKEADSFIAKALQKCPNSGILWAELIKM 639
R + +EA F+ A+Q P G + EL+++
Sbjct: 1155 CEGARIALNNNELREARRFLEFAIQFTPQFGDSFIELLRL 1194
>sp|Q6NS46|RRP5_MOUSE Protein RRP5 homolog OS=Mus musculus GN=Pdcd11 PE=2 SV=2
Length = 1862
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 97/220 (44%), Gaps = 28/220 (12%)
Query: 213 PKSVRLWLQ-------AAELDHDKANKSRVLR-MALDEIPDSVRLWKALVEI----SSEE 260
P S LWLQ A E++ +A R L+ ++ E + + +W AL+ + S+E
Sbjct: 1607 PNSSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQE 1666
Query: 261 EARILLHRAVECC-PLDVELWLA--LARLETYGVARSVLNKARKKLPKERAIWIAAAKLE 317
+ RAV+ PL V L LA + E Y A + N+ K+ +E+A+WI
Sbjct: 1667 SLTKVFERAVQYNEPLKVFLHLADIYTKSEKYKEAGELYNRMLKRFRQEKAVWIKYGAFV 1726
Query: 318 EANGNTSMVGKIIERGIRALQGEEVVIDRDTWMKEAEIAEKAGSDAEECKKRGSIETARA 377
++++R + L +E V D +K A++ + G +E A+A
Sbjct: 1727 LGRSQAGASHRVLQRALECLPAKEHV---DVIVKFAQLEFQL----------GDVERAKA 1773
Query: 378 IFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAV 417
IF + + + + +W + HGS+ ++ + + +
Sbjct: 1774 IFENTLSTYPKRTDVWSVYIDMTIKHGSQTAVRDIFERVI 1813
Score = 33.9 bits (76), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 105/266 (39%), Gaps = 53/266 (19%)
Query: 372 IETARAIFSHACTVF-----LTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVL 426
IE ARA+ A K ++W+ LE +GS+ESL + +AV Y +V
Sbjct: 1626 IEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESLTKVFERAVQYNEPLKVF 1685
Query: 427 WLMGAKEKWLAGDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERARMLLAKARD 486
+ D+ + +EA E NR L+R R A
Sbjct: 1686 LHL--------ADIYTKSEKYKEAG----------------ELYNRMLKRFRQEKA---- 1717
Query: 487 MGGTERVWMK-SAIVERELGNNAEERGFIEEGLKRFPS--FFNLWLMLGQLEERLGHLKE 543
VW+K A V A R ++ L+ P+ ++ + QLE +LG ++
Sbjct: 1718 ------VWIKYGAFVLGRSQAGASHR-VLQRALECLPAKEHVDVIVKFAQLEFQLGDVER 1770
Query: 544 AKEAYQSGCNQCPNCIPLWYSLANLEEKRNGLNGLSKA--RAV-LSVA--RLKNPLNPEI 598
AK +++ + P +W ++ K + R + LS+A R+K
Sbjct: 1771 AKAIFENTLSTYPKRTDVWSVYIDMTIKHGSQTAVRDIFERVIHLSLAPKRMKF-----F 1825
Query: 599 WLATIRAESKHGNKKEADSFIAKALQ 624
+ + E +HG +K+ + AKAL+
Sbjct: 1826 FKRYLDYEKQHGTEKDVQAVKAKALE 1851
>sp|P17886|CRN_DROME Protein crooked neck OS=Drosophila melanogaster GN=crn PE=2 SV=2
Length = 702
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 92/434 (21%), Positives = 172/434 (39%), Gaps = 43/434 (9%)
Query: 171 ARKLITKGCNMCPKNEDVWLEACRL----ARPDEAKGVVAKGVRQIPKSVRLWLQAA--- 223
AR + + + +N +WL+ + + + A+ + + V +P+ + W +
Sbjct: 95 ARSIWERALDNEHRNVTLWLKYAEMEMKNKQVNHARNLWDRAVTIMPRVNQFWYKYTYME 154
Query: 224 ELDHDKANKSRVLRMALDEIPDSVRLWKALV--EISSEE--EARILLHRAVECCPLDVEL 279
E+ + A +V ++ P+ + W+ V E+ +E AR + R V P DV+
Sbjct: 155 EMLENVAGARQVFERWMEWQPEE-QAWQTYVNFELRYKEIDRAREIYERFVYVHP-DVKN 212
Query: 280 WLALARLE-TYGV---ARSVLNKARKKLPK---ERAIWIAAAKLEEANGNTSMVGKIIER 332
W+ AR E ++G +R V +A + E ++IA A+ EE I +
Sbjct: 213 WIKFARFEESHGFIHGSRRVFERAVEFFGDDYIEERLFIAFARFEEGQKEHDRARIIYKY 272
Query: 333 GIRALQGEEVVIDRDTWMK-EAEIAEKAGSDAEECKKRGSIETARAIFSHACTVFLTKKS 391
+ L + + K E + ++AG + KR + + T
Sbjct: 273 ALDHLPKDRTQELFKAYTKHEKKYGDRAGIEDVIVSKR------KYQYEQEVAANPTNYD 326
Query: 392 IWLKAAQLEKTHGSRESLIALLRKAVTYFPQAE---------VLWLMGA-KEKWLAGDVP 441
W +L + G R+ + +A++ P A LW+ A E+ A D
Sbjct: 327 AWFDYLRLIEAEGDRDQIRETYERAISNVPPANEKNFWRRYIYLWINYALYEELEAEDAE 386
Query: 442 AARDILQEAYATIPNSE----EIWLAAFKLEFENRELERARMLLAKARDMGGTERVWMKS 497
R I + IP+ + ++WL + E +EL+RAR L A M ++++
Sbjct: 387 RTRQIYKTCLELIPHKQFTFSKLWLLYAQFEIRCKELQRARKALGLAIGMCPRDKLFRGY 446
Query: 498 AIVERELGNNAEERGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSGCNQCPN 557
+E +L R E+ L+ P W+ +LE LG A+ ++ Q
Sbjct: 447 IDLEIQLREFERCRMLYEKFLEFGPENCVTWMKFAELENLLGDTDRARAIFELAVQQPRL 506
Query: 558 CIP--LWYSLANLE 569
+P LW + + E
Sbjct: 507 DMPELLWKAYIDFE 520
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 102/277 (36%), Gaps = 13/277 (4%)
Query: 375 ARAIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVLWLMGAKEK 434
AR+I+ A ++WLK A++E + L +AVT P+ W +
Sbjct: 95 ARSIWERALDNEHRNVTLWLKYAEMEMKNKQVNHARNLWDRAVTIMPRVNQFWYKYTYME 154
Query: 435 WLAGDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERARMLLAKARDMGGTERVW 494
+ +V AR + + P E+ W E +E++RAR + + + + W
Sbjct: 155 EMLENVAGARQVFERWMEWQP-EEQAWQTYVNFELRYKEIDRAREIYERFVYVHPDVKNW 213
Query: 495 MKSAIVERELGNNAEERGFIEEGLKRFPSFF---NLWLMLGQLEERLGHLKEAKEAYQSG 551
+K A E G R E ++ F + L++ + EE A+ Y+
Sbjct: 214 IKFARFEESHGFIHGSRRVFERAVEFFGDDYIEERLFIAFARFEEGQKEHDRARIIYKYA 273
Query: 552 CNQCPN--CIPLWYSLANLEEKRNGLNGL-----SKARAVLSVARLKNPLNPEIWLATIR 604
+ P L+ + E+K G+ SK + NP N + W +R
Sbjct: 274 LDHLPKDRTQELFKAYTKHEKKYGDRAGIEDVIVSKRKYQYEQEVAANPTNYDAWFDYLR 333
Query: 605 AESKHGNKKEADSFIAKALQKCP--NSGILWAELIKM 639
G++ + +A+ P N W I +
Sbjct: 334 LIEAEGDRDQIRETYERAISNVPPANEKNFWRRYIYL 370
Score = 39.3 bits (90), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 149/413 (36%), Gaps = 74/413 (17%)
Query: 161 LEELAKEEAAARKLITKGCNMCPKNEDVWLEAC----RLARPDEAKGVVAKGVRQIPKSV 216
+EE+ + A AR++ + P+ E W R D A+ + + V P V
Sbjct: 153 MEEMLENVAGARQVFERWMEWQPE-EQAWQTYVNFELRYKEIDRAREIYERFVYVHP-DV 210
Query: 217 RLWLQAAELDHDKA---NKSRVLRMALDEIPDSV---RLWKALVEISS----EEEARILL 266
+ W++ A + RV A++ D RL+ A + ARI+
Sbjct: 211 KNWIKFARFEESHGFIHGSRRVFERAVEFFGDDYIEERLFIAFARFEEGQKEHDRARIIY 270
Query: 267 HRAVECCPLD--VELWLALARLETY-----GVARSVLNKARKKLPKERAI-------WIA 312
A++ P D EL+ A + E G+ +++K + + +E A W
Sbjct: 271 KYALDHLPKDRTQELFKAYTKHEKKYGDRAGIEDVIVSKRKYQYEQEVAANPTNYDAWFD 330
Query: 313 AAKLEEANGNTSMVGKIIERGIRALQ--GEEVVIDRDT--WMKEAEIAEKAGSDAEECKK 368
+L EA G+ + + ER I + E+ R W+ A E DAE +
Sbjct: 331 YLRLIEAEGDRDQIRETYERAISNVPPANEKNFWRRYIYLWINYALYEELEAEDAE--RT 388
Query: 369 RGSIETARAIFSHACTVFLTKKSIWLKAAQLE----------KTHG------SRESLI-- 410
R +T + H F +WL AQ E K G R+ L
Sbjct: 389 RQIYKTCLELIPHKQFTF---SKLWLLYAQFEIRCKELQRARKALGLAIGMCPRDKLFRG 445
Query: 411 ---------------ALLRKAVTYFPQAEVLWLMGAKEKWLAGDVPAARDILQEAYAT-- 453
L K + + P+ V W+ A+ + L GD AR I + A
Sbjct: 446 YIDLEIQLREFERCRMLYEKFLEFGPENCVTWMKFAELENLLGDTDRARAIFELAVQQPR 505
Query: 454 IPNSEEIWLAAFKLEFENRELERARMLLAKARDMGGTERVWMKSAIVERELGN 506
+ E +W A E E E AR L + + +VWM A E L +
Sbjct: 506 LDMPELLWKAYIDFEVALGETELARQLYERLLERTQHVKVWMSFAKFEMGLSH 558
Score = 33.1 bits (74), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 98/269 (36%), Gaps = 80/269 (29%)
Query: 183 PKNEDVWLEACRLARP----DEAKGVVAKGVRQIP---------KSVRLWLQAA---ELD 226
P N D W + RL D+ + + + +P + + LW+ A EL+
Sbjct: 322 PTNYDAWFDYLRLIEAEGDRDQIRETYERAISNVPPANEKNFWRRYIYLWINYALYEELE 381
Query: 227 HDKANKSR-VLRMALDEIPDS----VRLW-----------------KAL----------- 253
+ A ++R + + L+ IP +LW KAL
Sbjct: 382 AEDAERTRQIYKTCLELIPHKQFTFSKLWLLYAQFEIRCKELQRARKALGLAIGMCPRDK 441
Query: 254 ---------VEISSEEEARILLHRAVECCPLDVELWLALARLETY----GVARSVLNKA- 299
+++ E R+L + +E P + W+ A LE AR++ A
Sbjct: 442 LFRGYIDLEIQLREFERCRMLYEKFLEFGPENCVTWMKFAELENLLGDTDRARAIFELAV 501
Query: 300 -RKKLPKERAIWIAAAKLEEANGNTSMVGKIIERGIRALQGEEVVIDRDTWMKEAEIAE- 357
+ +L +W A E A G T + ++ ER + Q +V WM A+
Sbjct: 502 QQPRLDMPELLWKAYIDFEVALGETELARQLYERLLERTQHVKV------WMSFAKFEMG 555
Query: 358 ----KAGSDAEECKKRGSIETARAIFSHA 382
+G DAE +++ AR I+ A
Sbjct: 556 LSHGDSGPDAE-----LNVQLARRIYERA 579
>sp|P0CO10|CLF1_CRYNJ Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=CLF1 PE=3 SV=1
Length = 726
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 95/471 (20%), Positives = 165/471 (35%), Gaps = 105/471 (22%)
Query: 260 EEARILLHRAVECCPLDVELWLALARLE----TYGVARSVLNKARKKLPKERAIWIAAAK 315
E +R + RA++ P V+LW+ +E AR++ ++A LP+ A+W
Sbjct: 92 ERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHARNLFDRAITLLPRVDALWYKYVY 151
Query: 316 LEEANGNTSMVGKIIERGIRALQGEEVVIDRDTWMKEAEIAEKAGSDAEECKKR-GSIET 374
LEE N S +I ER WM+ E +KA + ++R ++
Sbjct: 152 LEELLLNVSGARQIFER----------------WMQ-WEPNDKAWQSYIKLEERYNELDR 194
Query: 375 ARAIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYF-------PQAEVLW 427
A AI+ K+ W+ A+ E+ G + + + A+ +F +A+ ++
Sbjct: 195 ASAIYERWIACRPIPKN-WVTWAKFEEDRGQPDKAREVFQTALEFFGDEEEQVEKAQSVF 253
Query: 428 LMGAKEKWLAGDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERARMLLAKARDM 487
A+ + + AR I + A A +P S+ L A +FE + +RA +
Sbjct: 254 AAFARMETRLKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGDRAGV-------- 305
Query: 488 GGTERVWMKSAIVERELGNNAEERGFIEEGLKRFPSFFNLWLMLGQLEERLGHLK----- 542
EL + R EE L P+ ++ W L +LEE
Sbjct: 306 ---------------ELTVLGKRRIQYEEELAYDPTNYDAWFSLARLEEDAYRADREDGE 350
Query: 543 -----EAKEAYQSGCNQCP---------NCIPLWYSLANLEE--KRNGLNGLSKARAVLS 586
+E Y+ P I LW A EE ++ +A +
Sbjct: 351 DVEPMRVREVYERAVANVPPALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVK 410
Query: 587 VARLKNPLNPEIWLATIRAESKHGNKKEADSFIAKALQKCPNSGILWAELIKMVPHHDRK 646
+ K ++WLA E + + A + + CP
Sbjct: 411 LVPHKTFTFAKLWLAYAYFEIRRLDVSAARKVLGAGIGMCPK------------------ 452
Query: 647 SKGKDALVKSDRDPHVFAAVAKLFWHDRKVDKARNWFNKAVSLDPDTGDFW 697
P +F +L R+ D+ R + K ++ DP W
Sbjct: 453 -------------PKLFTGYIELEMRLREFDRVRTLYEKFLTYDPSLSSAW 490
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 106/501 (21%), Positives = 185/501 (36%), Gaps = 125/501 (24%)
Query: 161 LEELAKEEAAARKLITKGCNMCPKNEDVWLEACRLARP----DEAKGVVAKGV--RQIPK 214
LEEL + AR++ + P N+ W +L D A + + + R IPK
Sbjct: 152 LEELLLNVSGARQIFERWMQWEP-NDKAWQSYIKLEERYNELDRASAIYERWIACRPIPK 210
Query: 215 SVRLWLQAAELDHDKANKSRVLRMALDEIPDSVR-LWKALVEISSEEEARILLHRAVECC 273
+ W+ A+ + D+ PD R +++ +E +EE ++ ++V
Sbjct: 211 N---WVTWAKFEEDRGQ------------PDKAREVFQTALEFFGDEEEQVEKAQSV--- 252
Query: 274 PLDVELWLALARLET----YGVARSVLNKARKKLPKERA--IWIAAAKLEEANGNTSMVG 327
+ A AR+ET + AR + A +LP+ ++ ++ K E+ +G+ + V
Sbjct: 253 ------FAAFARMETRLKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGDRAGV- 305
Query: 328 KIIERGIRALQGEEVV----IDRDTWMKEAEIAEKA-------GSDAEECKKRGSIETAR 376
++ G R +Q EE + + D W A + E A G D E + R E A
Sbjct: 306 ELTVLGKRRIQYEEELAYDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYERAV 365
Query: 377 AIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVLWL-MGAKEKW 435
A A LEK + R Y LWL A E+
Sbjct: 366 ANVPPA----------------LEKRYWRR----------YIY------LWLQYAAFEEI 393
Query: 436 LAGDVPAARDILQEAYATIPNSE----EIWLAAFKLEFENRELERARMLLAKARDMGGTE 491
D ARD+ + A +P+ ++WLA E ++ AR +L M
Sbjct: 394 DTKDYDRARDVYKAAVKLVPHKTFTFAKLWLAYAYFEIRRLDVSAARKVLGAGIGMCPKP 453
Query: 492 RVWMKSAIVERELGNNAEERGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSG 551
+++ G+IE LE RL + Y+
Sbjct: 454 KLFT----------------GYIE------------------LEMRLREFDRVRTLYEKF 479
Query: 552 CNQCPNCIPLWYSLANLEEKRNGLNGLSKARAVLSVARLKNPLNPEI-WLATIRAESKHG 610
P+ W +E + + + RA+ +A ++ PEI W A I E+ G
Sbjct: 480 LTYDPSLSSAWIQWTQVE---SAVEDFERVRAIFELAVQQSLDMPEIVWKAYIDFEAGEG 536
Query: 611 NKKEADSFIAKALQKCPNSGI 631
++ A + + L++ + +
Sbjct: 537 ERERARNLYERLLERTSHVKV 557
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/229 (19%), Positives = 89/229 (38%), Gaps = 13/229 (5%)
Query: 393 WLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVLWLMGAKEKWLAGDVPAARDILQEAYA 452
W K AQ E + E ++ +A+ P++ LW+ + A ++ AR++ A
Sbjct: 78 WTKYAQWEASQNEYERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHARNLFDRAIT 137
Query: 453 TIPNSEEIWLAAFKLEFENRELERARMLLAKARDMGGTERVWMKSAIVERELGNNAEERG 512
+P + +W LE + AR + + ++ W +E
Sbjct: 138 LLPRVDALWYKYVYLEELLLNVSGARQIFERWMQWEPNDKAWQSYIKLEERYNELDRASA 197
Query: 513 FIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSGC-------NQCPNCIPLWYSL 565
E + P N W+ + EE G +A+E +Q+ Q ++ +
Sbjct: 198 IYERWIACRPIPKN-WVTWAKFEEDRGQPDKAREVFQTALEFFGDEEEQVEKAQSVFAAF 256
Query: 566 ANLEEKRNGLNGLSKARAV--LSVARLKNPLNPEIWLATIRAESKHGNK 612
A +E + L +AR + ++ARL + ++ + E +HG++
Sbjct: 257 ARMETR---LKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGDR 302
Score = 37.0 bits (84), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 32/214 (14%)
Query: 169 AAARKLITKGCNMCPKNEDV--WLE-ACRLARPDEAKGVVAKGVRQIPKSVRLWLQAAEL 225
+AARK++ G MCPK + ++E RL D + + K + P W+Q ++
Sbjct: 437 SAARKVLGAGIGMCPKPKLFTGYIELEMRLREFDRVRTLYEKFLTYDPSLSSAWIQWTQV 496
Query: 226 DHDKANKSRV-------LRMALDEIPDSVRLWKALVEISS----EEEARILLHRAVECCP 274
+ + RV ++ +LD +P+ V WKA ++ + E AR L R +E
Sbjct: 497 ESAVEDFERVRAIFELAVQQSLD-MPEIV--WKAYIDFEAGEGERERARNLYERLLERTS 553
Query: 275 LDVELWLALARLETYGVARSVLNKARKKLPKERAIWIAAAKLEEANGNTSMVGKIIERGI 334
V++W++ A +E + L + E +E G+ + ++ ERG
Sbjct: 554 -HVKVWISYALMEI-----ATLGGGEDEDGNE---------IEGEAGDADLARQVFERGY 598
Query: 335 RALQGEEVVIDRDTWMKEAEIAEKAGSDAEECKK 368
+ L+ + DR ++ + E+ D E K
Sbjct: 599 KDLRAKGEKEDRAVLLESWKSFEQEHGDEETLAK 632
Score = 33.1 bits (74), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 147/409 (35%), Gaps = 65/409 (15%)
Query: 160 RLEELAKEEAAARKLITKGCNMCPKNEDVW--LEACRLARPDEAKGVVAKGVR------- 210
R EL + A + I C PKN W E R +PD+A+ V +
Sbjct: 188 RYNELDRASAIYERWI--ACRPIPKNWVTWAKFEEDR-GQPDKAREVFQTALEFFGDEEE 244
Query: 211 QIPKSVRLWLQAAELDH--DKANKSRVL-RMALDEIP--DSVRLW------------KAL 253
Q+ K+ ++ A ++ + ++RV+ + AL +P S L+ +A
Sbjct: 245 QVEKAQSVFAAFARMETRLKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGDRAG 304
Query: 254 VEISSEEEARILLHRAVECCPLDVELWLALARLETYGV--------------ARSVLNKA 299
VE++ + RI + P + + W +LARLE R V +A
Sbjct: 305 VELTVLGKRRIQYEEELAYDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYERA 364
Query: 300 RKKLP---------KERAIWIAAAKLEEANGNTSMVGKIIERGIRALQGEEVVIDRDTWM 350
+P + +W+ A EE + + + + L + W+
Sbjct: 365 VANVPPALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTFTFAKLWL 424
Query: 351 KEAEIAEKAGSDAEECKKRGSIETARAIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLI 410
A +R + AR + A K ++ +LE + +
Sbjct: 425 AYAYFE----------IRRLDVSAARKVLG-AGIGMCPKPKLFTGYIELEMRLREFDRVR 473
Query: 411 ALLRKAVTYFPQAEVLWLMGAKEKWLAGDVPAARDILQEAYA-TIPNSEEIWLAAFKLEF 469
L K +TY P W+ + + D R I + A ++ E +W A E
Sbjct: 474 TLYEKFLTYDPSLSSAWIQWTQVESAVEDFERVRAIFELAVQQSLDMPEIVWKAYIDFEA 533
Query: 470 ENRELERARMLLAKARDMGGTERVWMKSAIVE-RELGNNAEERGFIEEG 517
E ERAR L + + +VW+ A++E LG +E G EG
Sbjct: 534 GEGERERARNLYERLLERTSHVKVWISYALMEIATLGGGEDEDGNEIEG 582
>sp|P0CO11|CLF1_CRYNB Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=CLF1 PE=3 SV=1
Length = 726
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 95/471 (20%), Positives = 165/471 (35%), Gaps = 105/471 (22%)
Query: 260 EEARILLHRAVECCPLDVELWLALARLE----TYGVARSVLNKARKKLPKERAIWIAAAK 315
E +R + RA++ P V+LW+ +E AR++ ++A LP+ A+W
Sbjct: 92 ERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHARNLFDRAITLLPRVDALWYKYVY 151
Query: 316 LEEANGNTSMVGKIIERGIRALQGEEVVIDRDTWMKEAEIAEKAGSDAEECKKR-GSIET 374
LEE N S +I ER WM+ E +KA + ++R ++
Sbjct: 152 LEELLLNVSGARQIFER----------------WMQ-WEPNDKAWQSYIKLEERYNELDR 194
Query: 375 ARAIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYF-------PQAEVLW 427
A AI+ K+ W+ A+ E+ G + + + A+ +F +A+ ++
Sbjct: 195 ASAIYERWIACRPIPKN-WVTWAKFEEDRGQPDKAREVFQTALEFFGDEEEQVEKAQSVF 253
Query: 428 LMGAKEKWLAGDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERARMLLAKARDM 487
A+ + + AR I + A A +P S+ L A +FE + +RA +
Sbjct: 254 AAFARMETRLKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGDRAGV-------- 305
Query: 488 GGTERVWMKSAIVERELGNNAEERGFIEEGLKRFPSFFNLWLMLGQLEERLGHLK----- 542
EL + R EE L P+ ++ W L +LEE
Sbjct: 306 ---------------ELTVLGKRRIQYEEELAYDPTNYDAWFSLARLEEDAYRADREDGE 350
Query: 543 -----EAKEAYQSGCNQCP---------NCIPLWYSLANLEE--KRNGLNGLSKARAVLS 586
+E Y+ P I LW A EE ++ +A +
Sbjct: 351 DVEPMRVREVYERAVANVPPALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVK 410
Query: 587 VARLKNPLNPEIWLATIRAESKHGNKKEADSFIAKALQKCPNSGILWAELIKMVPHHDRK 646
+ K ++WLA E + + A + + CP
Sbjct: 411 LVPHKTFTFAKLWLAYAYFEIRRLDVSAARKVLGAGIGMCPK------------------ 452
Query: 647 SKGKDALVKSDRDPHVFAAVAKLFWHDRKVDKARNWFNKAVSLDPDTGDFW 697
P +F +L R+ D+ R + K ++ DP W
Sbjct: 453 -------------PKLFTGYIELEMRLREFDRVRTLYEKFLTYDPSLSSAW 490
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 106/501 (21%), Positives = 185/501 (36%), Gaps = 125/501 (24%)
Query: 161 LEELAKEEAAARKLITKGCNMCPKNEDVWLEACRLARP----DEAKGVVAKGV--RQIPK 214
LEEL + AR++ + P N+ W +L D A + + + R IPK
Sbjct: 152 LEELLLNVSGARQIFERWMQWEP-NDKAWQSYIKLEERYNELDRASAIYERWIACRPIPK 210
Query: 215 SVRLWLQAAELDHDKANKSRVLRMALDEIPDSVR-LWKALVEISSEEEARILLHRAVECC 273
+ W+ A+ + D+ PD R +++ +E +EE ++ ++V
Sbjct: 211 N---WVTWAKFEEDRGQ------------PDKAREVFQTALEFFGDEEEQVEKAQSV--- 252
Query: 274 PLDVELWLALARLET----YGVARSVLNKARKKLPKERA--IWIAAAKLEEANGNTSMVG 327
+ A AR+ET + AR + A +LP+ ++ ++ K E+ +G+ + V
Sbjct: 253 ------FAAFARMETRLKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGDRAGV- 305
Query: 328 KIIERGIRALQGEEVV----IDRDTWMKEAEIAEKA-------GSDAEECKKRGSIETAR 376
++ G R +Q EE + + D W A + E A G D E + R E A
Sbjct: 306 ELTVLGKRRIQYEEELAYDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYERAV 365
Query: 377 AIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVLWL-MGAKEKW 435
A A LEK + R Y LWL A E+
Sbjct: 366 ANVPPA----------------LEKRYWRR----------YIY------LWLQYAAFEEI 393
Query: 436 LAGDVPAARDILQEAYATIPNSE----EIWLAAFKLEFENRELERARMLLAKARDMGGTE 491
D ARD+ + A +P+ ++WLA E ++ AR +L M
Sbjct: 394 DTKDYDRARDVYKAAVKLVPHKTFTFAKLWLAYAYFEIRRLDVSAARKVLGAGIGMCPKP 453
Query: 492 RVWMKSAIVERELGNNAEERGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSG 551
+++ G+IE LE RL + Y+
Sbjct: 454 KLFT----------------GYIE------------------LEMRLREFDRVRTLYEKF 479
Query: 552 CNQCPNCIPLWYSLANLEEKRNGLNGLSKARAVLSVARLKNPLNPEI-WLATIRAESKHG 610
P+ W +E + + + RA+ +A ++ PEI W A I E+ G
Sbjct: 480 LTYDPSLSSAWIQWTQVE---SAVEDFERVRAIFELAVQQSLDMPEIVWKAYIDFEAGEG 536
Query: 611 NKKEADSFIAKALQKCPNSGI 631
++ A + + L++ + +
Sbjct: 537 ERERARNLYERLLERTSHVKV 557
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/229 (19%), Positives = 89/229 (38%), Gaps = 13/229 (5%)
Query: 393 WLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVLWLMGAKEKWLAGDVPAARDILQEAYA 452
W K AQ E + E ++ +A+ P++ LW+ + A ++ AR++ A
Sbjct: 78 WTKYAQWEASQNEYERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHARNLFDRAIT 137
Query: 453 TIPNSEEIWLAAFKLEFENRELERARMLLAKARDMGGTERVWMKSAIVERELGNNAEERG 512
+P + +W LE + AR + + ++ W +E
Sbjct: 138 LLPRVDALWYKYVYLEELLLNVSGARQIFERWMQWEPNDKAWQSYIKLEERYNELDRASA 197
Query: 513 FIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSGC-------NQCPNCIPLWYSL 565
E + P N W+ + EE G +A+E +Q+ Q ++ +
Sbjct: 198 IYERWIACRPIPKN-WVTWAKFEEDRGQPDKAREVFQTALEFFGDEEEQVEKAQSVFAAF 256
Query: 566 ANLEEKRNGLNGLSKARAV--LSVARLKNPLNPEIWLATIRAESKHGNK 612
A +E + L +AR + ++ARL + ++ + E +HG++
Sbjct: 257 ARMETR---LKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGDR 302
Score = 37.0 bits (84), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 32/214 (14%)
Query: 169 AAARKLITKGCNMCPKNEDV--WLE-ACRLARPDEAKGVVAKGVRQIPKSVRLWLQAAEL 225
+AARK++ G MCPK + ++E RL D + + K + P W+Q ++
Sbjct: 437 SAARKVLGAGIGMCPKPKLFTGYIELEMRLREFDRVRTLYEKFLTYDPSLSSAWIQWTQV 496
Query: 226 DHDKANKSRV-------LRMALDEIPDSVRLWKALVEISS----EEEARILLHRAVECCP 274
+ + RV ++ +LD +P+ V WKA ++ + E AR L R +E
Sbjct: 497 ESAVEDFERVRAIFELAVQQSLD-MPEIV--WKAYIDFEAGEGERERARNLYERLLERTS 553
Query: 275 LDVELWLALARLETYGVARSVLNKARKKLPKERAIWIAAAKLEEANGNTSMVGKIIERGI 334
V++W++ A +E + L + E +E G+ + ++ ERG
Sbjct: 554 -HVKVWISYALMEI-----ATLGGGEDEDGNE---------IEGEAGDADLARQVFERGY 598
Query: 335 RALQGEEVVIDRDTWMKEAEIAEKAGSDAEECKK 368
+ L+ + DR ++ + E+ D E K
Sbjct: 599 KDLRAKGEKEDRAVLLESWKSFEQEHGDEETLAK 632
Score = 33.1 bits (74), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 147/409 (35%), Gaps = 65/409 (15%)
Query: 160 RLEELAKEEAAARKLITKGCNMCPKNEDVW--LEACRLARPDEAKGVVAKGVR------- 210
R EL + A + I C PKN W E R +PD+A+ V +
Sbjct: 188 RYNELDRASAIYERWI--ACRPIPKNWVTWAKFEEDR-GQPDKAREVFQTALEFFGDEEE 244
Query: 211 QIPKSVRLWLQAAELDH--DKANKSRVL-RMALDEIP--DSVRLW------------KAL 253
Q+ K+ ++ A ++ + ++RV+ + AL +P S L+ +A
Sbjct: 245 QVEKAQSVFAAFARMETRLKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGDRAG 304
Query: 254 VEISSEEEARILLHRAVECCPLDVELWLALARLETYGV--------------ARSVLNKA 299
VE++ + RI + P + + W +LARLE R V +A
Sbjct: 305 VELTVLGKRRIQYEEELAYDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYERA 364
Query: 300 RKKLP---------KERAIWIAAAKLEEANGNTSMVGKIIERGIRALQGEEVVIDRDTWM 350
+P + +W+ A EE + + + + L + W+
Sbjct: 365 VANVPPALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTFTFAKLWL 424
Query: 351 KEAEIAEKAGSDAEECKKRGSIETARAIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLI 410
A +R + AR + A K ++ +LE + +
Sbjct: 425 AYAYFE----------IRRLDVSAARKVLG-AGIGMCPKPKLFTGYIELEMRLREFDRVR 473
Query: 411 ALLRKAVTYFPQAEVLWLMGAKEKWLAGDVPAARDILQEAYA-TIPNSEEIWLAAFKLEF 469
L K +TY P W+ + + D R I + A ++ E +W A E
Sbjct: 474 TLYEKFLTYDPSLSSAWIQWTQVESAVEDFERVRAIFELAVQQSLDMPEIVWKAYIDFEA 533
Query: 470 ENRELERARMLLAKARDMGGTERVWMKSAIVE-RELGNNAEERGFIEEG 517
E ERAR L + + +VW+ A++E LG +E G EG
Sbjct: 534 GEGERERARNLYERLLERTSHVKVWISYALMEIATLGGGEDEDGNEIEG 582
>sp|Q14690|RRP5_HUMAN Protein RRP5 homolog OS=Homo sapiens GN=PDCD11 PE=1 SV=3
Length = 1871
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 28/220 (12%)
Query: 213 PKSVRLWLQ-------AAELDHDKANKSRVLR-MALDEIPDSVRLWKALVEI----SSEE 260
P S LWLQ A E++ +A R L+ ++ E + + +W AL+ + S+E
Sbjct: 1616 PNSSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQE 1675
Query: 261 EARILLHRAVECC-PLDVELWLA--LARLETYGVARSVLNKARKKLPKERAIWIAAAKLE 317
+ RAV+ PL V L LA A+ E + A + N+ K+ +E+A+WI
Sbjct: 1676 SLTKVFERAVQYNEPLKVFLHLADIYAKSEKFQEAGELYNRMLKRFRQEKAVWIKYGAFL 1735
Query: 318 EANGNTSMVGKIIERGIRALQGEEVVIDRDTWMKEAEIAEKAGSDAEECKKRGSIETARA 377
+ ++++R + L +E V D K A++ + G DAE A+A
Sbjct: 1736 LRRSQAAASHRVLQRALECLPSKEHV---DVIAKFAQLEFQLG-DAER---------AKA 1782
Query: 378 IFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAV 417
IF + + + + +W + HGS++ + + + +
Sbjct: 1783 IFENTLSTYPKRTDVWSVYIDMTIKHGSQKDVRDIFERVI 1822
Score = 37.0 bits (84), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 101/265 (38%), Gaps = 51/265 (19%)
Query: 372 IETARAIFSHACTVF-----LTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVL 426
IE ARA+ A K ++W+ LE +GS+ESL + +AV Y +V
Sbjct: 1635 IEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESLTKVFERAVQYNEPLKVF 1694
Query: 427 WLMGAKEKWLAGDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERARMLLAKARD 486
+ D+ A + QEA E NR L+R R A
Sbjct: 1695 LHL--------ADIYAKSEKFQEAG----------------ELYNRMLKRFRQEKA---- 1726
Query: 487 MGGTERVWMKSAIVERELGNNAEERGFIEEGLKRFPS--FFNLWLMLGQLEERLGHLKEA 544
VW+K A ++ L+ PS ++ QLE +LG + A
Sbjct: 1727 ------VWIKYGAFLLRRSQAAASHRVLQRALECLPSKEHVDVIAKFAQLEFQLGDAERA 1780
Query: 545 KEAYQSGCNQCPNCIPLWYSLANLEEKRNGLNGLSKA--RAV-LSVA--RLKNPLNPEIW 599
K +++ + P +W ++ K + R + LS+A R+K +
Sbjct: 1781 KAIFENTLSTYPKRTDVWSVYIDMTIKHGSQKDVRDIFERVIHLSLAPKRMKF-----FF 1835
Query: 600 LATIRAESKHGNKKEADSFIAKALQ 624
+ E +HG +K+ + AKAL+
Sbjct: 1836 KRYLDYEKQHGTEKDVQAVKAKALE 1860
>sp|A7MB10|RRP5_BOVIN Protein RRP5 homolog OS=Bos taurus GN=PDCD11 PE=2 SV=1
Length = 1874
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 21/208 (10%)
Query: 218 LWLQAAELDHDKANKSRVLR-MALDEIPDSVRLWKALVEI----SSEEEARILLHRAVEC 272
LQA E++ +A R L+ ++ E + + +W AL+ + S+E + RAV+
Sbjct: 1631 FHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESLTKVFERAVQY 1690
Query: 273 C-PLDVELWLA--LARLETYGVARSVLNKARKKLPKERAIWIAAAKLEEANGNTSMVGKI 329
PL V L LA + E + A + N+ K+ +E+A+W+ G ++
Sbjct: 1691 NEPLKVFLHLADIYTKSEKFQEAGELYNRMLKRFRQEKAVWVKYGAFLLRRGKAEASHRV 1750
Query: 330 IERGIRALQGEEVVIDRDTWMKEAEIAEKAGSDAEECKKRGSIETARAIFSHACTVFLTK 389
++R + L +E V D K A++ + G DAE ARAIF +++ +
Sbjct: 1751 MQRALECLPKKEHV---DVIAKFAQLEFQLG-DAER---------ARAIFESTLSIYPKR 1797
Query: 390 KSIWLKAAQLEKTHGSRESLIALLRKAV 417
+W + HGS++ A+ + +
Sbjct: 1798 TDVWSVYIDMIIKHGSQKEARAIFERVI 1825
Score = 38.5 bits (88), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 79/197 (40%), Gaps = 31/197 (15%)
Query: 372 IETARAIFSHACTVF-----LTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVL 426
IE ARA+ A K ++W+ LE +GS+ESL + +AV Y +V
Sbjct: 1638 IEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESLTKVFERAVQYNEPLKVF 1697
Query: 427 WLMGAKEKWLAGDVPAARDILQEA-------YATIPNSEEIWL--AAF-----KLEFENR 472
+ D+ + QEA + +W+ AF K E +R
Sbjct: 1698 LHL--------ADIYTKSEKFQEAGELYNRMLKRFRQEKAVWVKYGAFLLRRGKAEASHR 1749
Query: 473 ELERARMLLAKARDMGGTERVWMKSAIVERELGNNAEERGFIEEGLKRFPSFFNLWLMLG 532
++RA L K + V K A +E +LG+ R E L +P ++W +
Sbjct: 1750 VMQRALECLPKKEHVD----VIAKFAQLEFQLGDAERARAIFESTLSIYPKRTDVWSVYI 1805
Query: 533 QLEERLGHLKEAKEAYQ 549
+ + G KEA+ ++
Sbjct: 1806 DMIIKHGSQKEARAIFE 1822
>sp|Q9HF03|CLF1_CRYNH Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var.
grubii serotype A (strain H99 / ATCC 208821 / CBS 10515
/ FGSC 9487) GN=CLF1 PE=3 SV=1
Length = 724
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 95/471 (20%), Positives = 166/471 (35%), Gaps = 105/471 (22%)
Query: 260 EEARILLHRAVECCPLDVELWLALARLE----TYGVARSVLNKARKKLPKERAIWIAAAK 315
E +R + RA++ P V+LW+ +E AR++ ++A LP+ A+W
Sbjct: 92 ERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHARNLFDRAITLLPRVDALWYKYVY 151
Query: 316 LEEANGNTSMVGKIIERGIRALQGEEVVIDRDTWMKEAEIAEKAGSDAEECKKR-GSIET 374
LEE N S +I ER WM+ E +KA + ++R ++
Sbjct: 152 LEELLLNVSGARQIFER----------------WMQ-WEPNDKAWQSYIKLEERYNELDR 194
Query: 375 ARAIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYF-------PQAEVLW 427
A AI+ K+ W+ A+ E+ G + + + A+ +F +A+ ++
Sbjct: 195 ASAIYERWIACRPIPKN-WVAWAKFEEDRGQPDKAREVFQTALEFFGDEEEQVEKAQSVF 253
Query: 428 LMGAKEKWLAGDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERARMLLAKARDM 487
A+ + + AR I + A A +P S+ L A +FE + +RA + L +
Sbjct: 254 AAFARMETRLKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGDRAGVELT----V 309
Query: 488 GGTERVWMKSAIVERELGNNAEERGFIEEGLKRFPSFFNLWLMLGQLEERLGHLK----- 542
G R+ EE L P+ ++ W L +LEE
Sbjct: 310 LGKRRIQY-------------------EEELAYDPTNYDAWFSLARLEEDAYRADREDGE 350
Query: 543 -----EAKEAYQSGCNQCP---------NCIPLWYSLANLEE--KRNGLNGLSKARAVLS 586
+E Y+ P I LW A EE ++ +A +
Sbjct: 351 DVEPMRVREVYERAVANVPPALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVK 410
Query: 587 VARLKNPLNPEIWLATIRAESKHGNKKEADSFIAKALQKCPNSGILWAELIKMVPHHDRK 646
+ K ++WLA E + + A + + CP
Sbjct: 411 LVPHKTFTFAKLWLAYAYFEIRRLDVSAARKVLGAGIGMCPK------------------ 452
Query: 647 SKGKDALVKSDRDPHVFAAVAKLFWHDRKVDKARNWFNKAVSLDPDTGDFW 697
P +F +L R+ D+ R + K ++ DP W
Sbjct: 453 -------------PKLFTGYIELEMRLREFDRVRTLYEKFLTYDPSLSSAW 490
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 101/502 (20%), Positives = 182/502 (36%), Gaps = 127/502 (25%)
Query: 161 LEELAKEEAAARKLITKGCNMCPKNEDVWLEACRLARP----DEAKGVVAKGV--RQIPK 214
LEEL + AR++ + P N+ W +L D A + + + R IPK
Sbjct: 152 LEELLLNVSGARQIFERWMQWEP-NDKAWQSYIKLEERYNELDRASAIYERWIACRPIPK 210
Query: 215 SVRLWLQAAELDHDKANKSRVLRMALDEIPDSVR-LWKALVEISSEEEARILLHRAVECC 273
+ W+ A+ + D+ PD R +++ +E +EE ++ ++V
Sbjct: 211 N---WVAWAKFEEDRGQ------------PDKAREVFQTALEFFGDEEEQVEKAQSV--- 252
Query: 274 PLDVELWLALARLET----YGVARSVLNKARKKLPKERA--IWIAAAKLEEANGNTSMVG 327
+ A AR+ET + AR + A +LP+ ++ ++ K E+ +G+ + V
Sbjct: 253 ------FAAFARMETRLKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGDRAGV- 305
Query: 328 KIIERGIRALQGEEVV----IDRDTWMKEAEIAEKA-------GSDAEECKKRGSIETAR 376
++ G R +Q EE + + D W A + E A G D E + R E A
Sbjct: 306 ELTVLGKRRIQYEEELAYDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYERAV 365
Query: 377 AIFSHACTVFLTKKSI--WLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVLWLMGAKEK 434
A A ++ I WL+ A E+
Sbjct: 366 ANVPPALEKRYWRRYIYLWLQYAAFEEID------------------------------- 394
Query: 435 WLAGDVPAARDILQEAYATIPNSE----EIWLAAFKLEFENRELERARMLLAKARDMGGT 490
D ARD+ + A +P+ ++WLA E ++ AR +L M
Sbjct: 395 --TKDYDRARDVYKAAVKLVPHKTFTFAKLWLAYAYFEIRRLDVSAARKVLGAGIGMCPK 452
Query: 491 ERVWMKSAIVERELGNNAEERGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQS 550
+++ G+IE LE RL + Y+
Sbjct: 453 PKLFT----------------GYIE------------------LEMRLREFDRVRTLYEK 478
Query: 551 GCNQCPNCIPLWYSLANLEEKRNGLNGLSKARAVLSVARLKNPLNPEI-WLATIRAESKH 609
P+ W +E + + + RA+ +A ++ PEI W A I E+
Sbjct: 479 FLTYDPSLSSAWIQWTQVE---SAVEDFERVRAIFELAVQQSLDMPEIVWKAYIDFEAGE 535
Query: 610 GNKKEADSFIAKALQKCPNSGI 631
G ++ A + + L++ + +
Sbjct: 536 GERERARNLYERLLERTSHVKV 557
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/229 (19%), Positives = 89/229 (38%), Gaps = 13/229 (5%)
Query: 393 WLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVLWLMGAKEKWLAGDVPAARDILQEAYA 452
W K AQ E + E ++ +A+ P++ LW+ + A ++ AR++ A
Sbjct: 78 WTKYAQWEASQNEYERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHARNLFDRAIT 137
Query: 453 TIPNSEEIWLAAFKLEFENRELERARMLLAKARDMGGTERVWMKSAIVERELGNNAEERG 512
+P + +W LE + AR + + ++ W +E
Sbjct: 138 LLPRVDALWYKYVYLEELLLNVSGARQIFERWMQWEPNDKAWQSYIKLEERYNELDRASA 197
Query: 513 FIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSGC-------NQCPNCIPLWYSL 565
E + P N W+ + EE G +A+E +Q+ Q ++ +
Sbjct: 198 IYERWIACRPIPKN-WVAWAKFEEDRGQPDKAREVFQTALEFFGDEEEQVEKAQSVFAAF 256
Query: 566 ANLEEKRNGLNGLSKARAV--LSVARLKNPLNPEIWLATIRAESKHGNK 612
A +E + L +AR + ++ARL + ++ + E +HG++
Sbjct: 257 ARMETR---LKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGDR 302
Score = 38.1 bits (87), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 44/201 (21%)
Query: 169 AAARKLITKGCNMCPKNEDV--WLE-ACRLARPDEAKGVVAKGVRQIPKSVRLWLQAAEL 225
+AARK++ G MCPK + ++E RL D + + K + P W+Q ++
Sbjct: 437 SAARKVLGAGIGMCPKPKLFTGYIELEMRLREFDRVRTLYEKFLTYDPSLSSAWIQWTQV 496
Query: 226 DHDKANKSRV-------LRMALDEIPDSVRLWKALVEISS----EEEARILLHRAVECCP 274
+ + RV ++ +LD +P+ V WKA ++ + E AR L R +E
Sbjct: 497 ESAVEDFERVRAIFELAVQQSLD-MPEIV--WKAYIDFEAGEGERERARNLYERLLERTS 553
Query: 275 LDVELWLALARLE--TYG------------------VARSVLNKARKKL-----PKERAI 309
V++W++ A +E T G +AR V + K L ++RA+
Sbjct: 554 -HVKVWISYALMEIATLGGGEDEDGNEIEGEAGDADLARKVFERGYKDLRAKGEKEDRAV 612
Query: 310 WIAAAK-LEEANGNTSMVGKI 329
+ + K E+ +G+ M+ K+
Sbjct: 613 LLESWKSFEQEHGDEEMLAKV 633
>sp|Q12309|CLF1_YEAST Pre-mRNA-splicing factor CLF1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CLF1 PE=1 SV=1
Length = 687
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 73/169 (43%), Gaps = 6/169 (3%)
Query: 461 WLAAFKLEFENRELERARMLLAKARDMGGTE-RVWMKSAIVERELGNNAEERGFIEEGLK 519
W+ + E E ++ RAR + +A + + +W++ E ++ R + +
Sbjct: 68 WIRYAQFEIEQHDMRRARSIFERALLVDSSFIPLWIRYIDAELKVKCINHARNLMNRAIS 127
Query: 520 RFPSFFNLWLMLGQLEERLGHLKEAKEAYQSGCNQCPNCIPLWYSLANLEEKRNGLNGLS 579
P LW +EE L +++ + Y C+ P + W S + E ++ NG+
Sbjct: 128 TLPRVDKLWYKYLIVEESLNNVEIVRSLYTKWCSLEPG-VNAWNSFVDFEIRQKNWNGV- 185
Query: 580 KARAVLSVARLKNPLNPEIWLATIRAESKHGNKKEADSFIAKALQKCPN 628
R + S + +P + WL +R E++HGN + S + A+ N
Sbjct: 186 --REIYSKYVMAHP-QMQTWLKWVRFENRHGNTEFTRSVYSLAIDTVAN 231
Score = 41.6 bits (96), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 16/134 (11%)
Query: 171 ARKLITKGCNMCPKNEDV--WLE-ACRLARPDEAKGVVAKGVRQIPKSVRLWLQAAELDH 227
ARK++ K +CPK + ++E +L D + + K + P +++W Q EL+
Sbjct: 423 ARKILGKAIGLCPKAKTFKGYIELEVKLKEFDRVRKIYEKFIEFQPSDLQIWSQYGELEE 482
Query: 228 DKANKSRV---LRMALDEIPD------SVRLWKALVEISSE----EEARILLHRAVECCP 274
+ + RV +ALDE D + L + + +E E+AR L R +E
Sbjct: 483 NLGDWDRVRGIYTIALDENSDFLTKEAKIVLLQKYITFETESQEFEKARKLYRRYLELNQ 542
Query: 275 LDVELWLALARLET 288
+ W+ A +T
Sbjct: 543 YSPQSWIEFAMYQT 556
Score = 35.4 bits (80), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 426 LWLMGAKEKWLAGDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERARMLLAKAR 485
+WLM AK DVP AR IL +A P + + + +LE + +E +R R + K
Sbjct: 406 IWLMYAKFLIRHDDVPKARKILGKAIGLCPKA-KTFKGYIELEVKLKEFDRVRKIYEKFI 464
Query: 486 DMGGTE-RVWMKSAIVERELGNNAEERG 512
+ ++ ++W + +E LG+ RG
Sbjct: 465 EFQPSDLQIWSQYGELEENLGDWDRVRG 492
>sp|Q4PB37|CLF1_USTMA Pre-mRNA-splicing factor CLF1 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=CLF1 PE=3 SV=1
Length = 781
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 91/222 (40%), Gaps = 16/222 (7%)
Query: 369 RGSIETARAIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVLWL 428
+G ++ R+I+ A V +WL+ + E + + L +AV+ P+ + LW
Sbjct: 83 QGEMDRCRSIYERALDVEPHHLPLWLRYTEQELKMRNVQHARNLYDRAVSILPRIDQLWY 142
Query: 429 MGAKEKWLAGDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERARMLLAKARDMG 488
+ L G++P R + + P E+ W A LE EL+RA + +
Sbjct: 143 KYVHLEELLGNIPGTRQVFERWMKWEPE-EKAWHAYINLEVRYDELDRASAIWERCVTCH 201
Query: 489 GTERVWMKSAIVERELGNNAEER----------GFIEEGLKRFPSFFNLWLMLGQLEERL 538
+ W++ A E + GN + R G E+ +++ S F ++E RL
Sbjct: 202 PVPKQWIRWAKFEEDRGNLEKARIVFQMALDYIGEDEDAMEKAQSVFT---AFAKMETRL 258
Query: 539 GHLKEAKEAYQSGCNQCPNCIP--LWYSLANLEEKRNGLNGL 578
+ A+ Y+ + P ++ S E++ +N +
Sbjct: 259 KEYERARVIYKYALERLPRSKSEGIYSSYTRFEKQFGTMNSV 300
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 89/434 (20%), Positives = 170/434 (39%), Gaps = 83/434 (19%)
Query: 171 ARKLITKGCNMCPKNEDVWLEACRLARPDEAKGVVAKGVRQIPKSVRLWLQAAELDHDKA 230
AR L + ++ P+ + +W + L +E G + G RQ+ + W + H
Sbjct: 123 ARNLYDRAVSILPRIDQLWYKYVHL---EELLGNIP-GTRQVFERWMKWEPEEKAWHAYI 178
Query: 231 NKSRVLRMALDEIPDSVRLWKALV-----------------EISSEEEARILLHRAVECC 273
N L + DE+ + +W+ V + + E+ARI+ A++
Sbjct: 179 N----LEVRYDELDRASAIWERCVTCHPVPKQWIRWAKFEEDRGNLEKARIVFQMALDYI 234
Query: 274 PLDVE-------LWLALARLET----YGVARSVLNKARKKLPKERA--IWIAAAKLEEAN 320
D + ++ A A++ET Y AR + A ++LP+ ++ I+ + + E+
Sbjct: 235 GEDEDAMEKAQSVFTAFAKMETRLKEYERARVIYKYALERLPRSKSEGIYSSYTRFEKQF 294
Query: 321 GNTSMVGKIIERGIRALQGEEVVI---------DRDTWMKEAEIAEKA-----GSDAEEC 366
G + V + G R +Q EE + D DTW + + E A + +
Sbjct: 295 GTMNSVEDTV-IGKRRIQYEEELAAQEAGGAPADYDTWFDYSRLEEDAYRALLATGGSQD 353
Query: 367 KKRGSIETARAIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVL 426
+ + +++ R ++ A AQ+ + R+ R+ + L
Sbjct: 354 QLQQAVKRVREVYERAI-------------AQVPSSQEKRD-----WRRYI-------FL 388
Query: 427 WLMGA-KEKWLAGDVPAARDILQEAYATIPNSE----EIWLAAFKLEFENRELERARMLL 481
WL A E+ D R+I + A A +P+ ++W+ + E EL AR +L
Sbjct: 389 WLRYALFEEIDTRDYDRTREIYKAAIALVPHRRFTFAKLWVQYARFEVRRLELTAARKIL 448
Query: 482 AKARDMGGTERVWMKSAIVERELGNNAEERGFIEEGLKRFPSFFNLWLMLGQLEERLGHL 541
A M +++ +E L R E+ L+ P+ W+ +LE+ L
Sbjct: 449 GAAIGMAPKLKLFSSYIELEVSLKEFDRARKIYEKALEWDPTNSQTWVRFAELEKNLFDT 508
Query: 542 KEAKEAYQSGCNQC 555
A+ ++ G Q
Sbjct: 509 DRARALFELGVGQA 522
Score = 40.8 bits (94), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 78/212 (36%), Gaps = 20/212 (9%)
Query: 493 VWMKSAIVERELGNNAEERGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSGC 552
W+K A E G R E L P LWL + E ++ +++ A+ Y
Sbjct: 72 TWIKYASWEASQGEMDRCRSIYERALDVEPHHLPLWLRYTEQELKMRNVQHARNLYDRAV 131
Query: 553 NQCPNCIPLWYSLANLEEKRNGLNGLSKARAVLSVARLKNPLNPEIWLATIRAESKHGNK 612
+ P LWY +LEE + G R V P + W A I E ++
Sbjct: 132 SILPRIDQLWYKYVHLEELLGNIPG---TRQVFERWMKWEP-EEKAWHAYINLEVRYDEL 187
Query: 613 KEADSFIAKAL--QKCPNSGILWAEL-----------IKMVPHHDRKSKGKDALVKSDRD 659
A + + + P I WA+ I D + +DA+ K+
Sbjct: 188 DRASAIWERCVTCHPVPKQWIRWAKFEEDRGNLEKARIVFQMALDYIGEDEDAMEKAQ-- 245
Query: 660 PHVFAAVAKLFWHDRKVDKARNWFNKAVSLDP 691
VF A AK+ ++ ++AR + A+ P
Sbjct: 246 -SVFTAFAKMETRLKEYERARVIYKYALERLP 276
Score = 38.9 bits (89), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 77/201 (38%), Gaps = 44/201 (21%)
Query: 391 SIWLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVLWLMGAKEKWLAGDVPAARDILQEA 450
S W+K A E + G + ++ +A+ P LWL +++ +V AR++ A
Sbjct: 71 STWIKYASWEASQGEMDRCRSIYERALDVEPHHLPLWLRYTEQELKMRNVQHARNLYDRA 130
Query: 451 YATIPNSEEIWLAAFKLEFENRELERARMLLAKARDMGGTERVWMKSAIVERELGNNAEE 510
+ +P +++W LE LL ++ GT +V+ ER + EE
Sbjct: 131 VSILPRIDQLWYKYVHLE----------ELLG---NIPGTRQVF------ERWMKWEPEE 171
Query: 511 RGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSGCNQCPNCIPL---WYSLAN 567
+ W LE R L A ++ +C C P+ W A
Sbjct: 172 KA---------------WHAYINLEVRYDELDRASAIWE----RCVTCHPVPKQWIRWAK 212
Query: 568 LEEKRNGLNGLSKARAVLSVA 588
EE R L KAR V +A
Sbjct: 213 FEEDRGNLE---KARIVFQMA 230
Score = 34.3 bits (77), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 99/465 (21%), Positives = 157/465 (33%), Gaps = 124/465 (26%)
Query: 219 WLQAAELDHDKANKSR---VLRMALDEIPDSVRLWKALVE----ISSEEEARILLHRAVE 271
W++ A + + R + ALD P + LW E + + + AR L RAV
Sbjct: 73 WIKYASWEASQGEMDRCRSIYERALDVEPHHLPLWLRYTEQELKMRNVQHARNLYDRAVS 132
Query: 272 CCPLDVELWLALARLE----TYGVARSVLNKARKKLPKERA------------------- 308
P +LW LE R V + K P+E+A
Sbjct: 133 ILPRIDQLWYKYVHLEELLGNIPGTRQVFERWMKWEPEEKAWHAYINLEVRYDELDRASA 192
Query: 309 -------------IWIAAAKLEEANGNTSMVGKIIERGIRALQGEEVVIDRDTWMKEAEI 355
WI AK EE GN + + + + GE D D M++A+
Sbjct: 193 IWERCVTCHPVPKQWIRWAKFEEDRGNLEKARIVFQMALDYI-GE----DEDA-MEKAQS 246
Query: 356 AEKAGSDAEECKKRGSIETARAIFSHACTVFLTKKS--IWLKAAQLEKTHGSRESL--IA 411
A + E K E AR I+ +A KS I+ + EK G+ S+
Sbjct: 247 VFTAFAKMETRLK--EYERARVIYKYALERLPRSKSEGIYSSYTRFEKQFGTMNSVEDTV 304
Query: 412 LLRKAVTY-----------FPQAEVLWL---------------MGAKEKWLAGDVPAARD 445
+ ++ + Y P W G + L V R+
Sbjct: 305 IGKRRIQYEEELAAQEAGGAPADYDTWFDYSRLEEDAYRALLATGGSQDQLQQAVKRVRE 364
Query: 446 ILQEAYATIPNSEE---------IWL-AAFKLEFENRELERARMLLAKARDMGGTERVWM 495
+ + A A +P+S+E +WL A E + R+ +R R + A
Sbjct: 365 VYERAIAQVPSSQEKRDWRRYIFLWLRYALFEEIDTRDYDRTREIYKAA----------- 413
Query: 496 KSAIVERELGNNAEERGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSGCNQC 555
A+V +RF +F LW+ + E R L A++ +
Sbjct: 414 -IALVPH----------------RRF-TFAKLWVQYARFEVRRLELTAARKILGAAIGMA 455
Query: 556 PNCIPLWYSLANLEEKRNGLNGLSKARAVLSVARLKNPLNPEIWL 600
P + L+ S LE L +AR + A +P N + W+
Sbjct: 456 PK-LKLFSSYIELE---VSLKEFDRARKIYEKALEWDPTNSQTWV 496
>sp|Q6C186|CLF1_YARLI Pre-mRNA-splicing factor CLF1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=CLF1 PE=3 SV=1
Length = 676
Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 104/283 (36%), Gaps = 23/283 (8%)
Query: 375 ARAIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVLWLMGAKEK 434
AR++F A V T W++ Q E + LL +AVT P+ + LW +
Sbjct: 85 ARSVFERALEVNSTHVPTWIRYIQCELKEKNINHARNLLDRAVTLLPRVDKLWFTYVATE 144
Query: 435 WLAGDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERARMLLAKARDMGGTERVW 494
G++ R + + P W A +E RE +RAR +L + + W
Sbjct: 145 ETLGNIAGCRAVFERWMHWRPPV-TAWAAYVNMEKRYREFDRARGILRRYVTVHPGAPAW 203
Query: 495 MKSAIVERELGNNAEERGFIEEGLKRF-------PSFFNLWLMLG--QLEERLGHLKEAK 545
K A E E GN R G+ F + L+ G E R + A+
Sbjct: 204 NKWAKFEMEAGNRDTVREVYALGIDTLVEMAHGGVDFLDESLLAGWASFETRHREYERAR 263
Query: 546 EAYQSGCNQCP--NCIPLWYSLANLEEKRNGLNG-----LSKARAVLSVARLKNPLNPEI 598
Y G + P L+ E++ G L+K R+ ++P + +
Sbjct: 264 ALYTYGLEKLPKSKSAKLYADYTAFEKQYGAKEGIENVVLTKRRSKYEDQLKEDPADYDT 323
Query: 599 WLATIRAESKHGNKKEADS---FIAKALQKC-PNSGILWAELI 637
W + I + G EAD +A+ P+S LW I
Sbjct: 324 WFSYITLGQESG--LEADQIREIFERAVSNVPPHSKRLWRRYI 364
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 83/399 (20%), Positives = 141/399 (35%), Gaps = 90/399 (22%)
Query: 262 ARILLHRAVECCPLDVELWLALARLE----TYGVARSVLNKARKKLPKERAIWIAAAKLE 317
AR + RA+E V W+ + E AR++L++A LP+ +W E
Sbjct: 85 ARSVFERALEVNSTHVPTWIRYIQCELKEKNINHARNLLDRAVTLLPRVDKLWFTYVATE 144
Query: 318 EANGNTSMVGKIIERGIRALQGEEVVIDRDTWMKEAEIAEKAGSDAEECKKRGSIETARA 377
E GN + + ER WM
Sbjct: 145 ETLGNIAGCRAVFER----------------WMH-------------------------- 162
Query: 378 IFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVLWLMGAKEKWLA 437
+ + W +EK + + +LR+ VT P A W AK + A
Sbjct: 163 --------WRPPVTAWAAYVNMEKRYREFDRARGILRRYVTVHPGAPA-WNKWAKFEMEA 213
Query: 438 GDVPAARDI--------LQEAYATIPNSEEIWLAAF-KLEFENRELERARMLLAKARD-- 486
G+ R++ ++ A+ + +E LA + E +RE ERAR L +
Sbjct: 214 GNRDTVREVYALGIDTLVEMAHGGVDFLDESLLAGWASFETRHREYERARALYTYGLEKL 273
Query: 487 -MGGTERVWMKSAIVERELGNN--------AEERGFIEEGLKRFPSFFNLWLMLGQLEER 537
+ +++ E++ G + R E+ LK P+ ++ W L +
Sbjct: 274 PKSKSAKLYADYTAFEKQYGAKEGIENVVLTKRRSKYEDQLKEDPADYDTWFSYITLGQE 333
Query: 538 LG-HLKEAKEAYQSGCNQCP--------NCIPLWYSLANLEEKRNGLNGLSKARAV---- 584
G + +E ++ + P I LW A EE N + KAR +
Sbjct: 334 SGLEADQIREIFERAVSNVPPHSKRLWRRYIFLWIKYAIWEELEN--KEVEKAREIYKTC 391
Query: 585 LSVARLKNPLNPEIWLATIRAESKHGNKKEADSFIAKAL 623
+S+ K ++WL + E +HGN EA + + L
Sbjct: 392 ISIIPHKKFTFAKVWLLWAKFEIRHGNLPEARKILGRGL 430
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 110/500 (22%), Positives = 187/500 (37%), Gaps = 79/500 (15%)
Query: 220 LQAAELDHDKANKSRVLRMALDEIPDSVRLWKALVEISSEEEARILLHRAVECCPLDVEL 279
L+ E ++ R L + +P +R + ++ + AR LL RAV P +L
Sbjct: 77 LEQREFARARSVFERALEVNSTHVPTWIRYIQCELKEKNINHARNLLDRAVTLLPRVDKL 136
Query: 280 WLA-LARLETYG----------------------VARSVLNKARKKLPKERAI------- 309
W +A ET G A + K ++ + R I
Sbjct: 137 WFTYVATEETLGNIAGCRAVFERWMHWRPPVTAWAAYVNMEKRYREFDRARGILRRYVTV 196
Query: 310 ------WIAAAKLEEANGNTSMVGKIIERGIRALQGEEVVIDRDTWMKEAEIAEKAGSDA 363
W AK E GN V ++ GI L E+ ++ E+ + AG +
Sbjct: 197 HPGAPAWNKWAKFEMEAGNRDTVREVYALGIDTLV--EMAHGGVDFLDESLL---AGWAS 251
Query: 364 EECKKRGSIETARAIFSHACTVFLTKKSIWLKA--AQLEKTHGSRESL--IALLRKAVTY 419
E + R E ARA++++ KS L A EK +G++E + + L ++ Y
Sbjct: 252 FETRHR-EYERARALYTYGLEKLPKSKSAKLYADYTAFEKQYGAKEGIENVVLTKRRSKY 310
Query: 420 FPQAE---------VLWLMGAKEKWLAGDVPAARDILQEAYATI-PNSEEIWLAAFKL-- 467
Q + ++ +E L D R+I + A + + P+S+ +W L
Sbjct: 311 EDQLKEDPADYDTWFSYITLGQESGLEAD--QIREIFERAVSNVPPHSKRLWRRYIFLWI 368
Query: 468 ------EFENRELERARMLLAKARDM-----GGTERVWMKSAIVERELGNNAEERGFIEE 516
E EN+E+E+AR + + +VW+ A E GN E R +
Sbjct: 369 KYAIWEELENKEVEKAREIYKTCISIIPHKKFTFAKVWLLWAKFEIRHGNLPEARKILGR 428
Query: 517 GLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSGCNQCPNCIPLWYSLANLEEKRNGLN 576
GL L+ LE +L ++ Y + W A LE+ L
Sbjct: 429 GLGMSGGKPALYKGYIALEAKLREFDRCRKLYDKYVEKFAEFAAPWMEYAELEQM---LG 485
Query: 577 GLSKARAVLSVARLKNPLN-PE-IWLATIRAESKHGNKKEADSFIAKALQKCPNSGILW- 633
+ARA+ +A + + PE +W I E++ N A + + L + +W
Sbjct: 486 DEERARAIFELAVSQPEMEMPELVWKRFIEFEAEEENYDRARAIYRQLLDRTHGHIKVWI 545
Query: 634 --AELIKMVPHHDRKSKGKD 651
A+ VP D++ + D
Sbjct: 546 SFAQFEVTVPAEDQELQYND 565
Score = 40.4 bits (93), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 6/153 (3%)
Query: 461 WLAAFKLEFENRELERARMLLAKARDMGGTE-RVWMKSAIVERELGNNAEERGFIEEGLK 519
W+ + E E RE RAR + +A ++ T W++ E + N R ++ +
Sbjct: 69 WMRYAQWELEQREFARARSVFERALEVNSTHVPTWIRYIQCELKEKNINHARNLLDRAVT 128
Query: 520 RFPSFFNLWLMLGQLEERLGHLKEAKEAYQSGCNQCPNCIPLWYSLANLEEKRNGLNGLS 579
P LW EE LG++ + ++ + P + W + N+E++ +
Sbjct: 129 LLPRVDKLWFTYVATEETLGNIAGCRAVFERWMHWRP-PVTAWAAYVNMEKRYREFD--- 184
Query: 580 KARAVLSVARLKNPLNPEIWLATIRAESKHGNK 612
+AR +L +P P W + E + GN+
Sbjct: 185 RARGILRRYVTVHPGAP-AWNKWAKFEMEAGNR 216
Score = 34.7 bits (78), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 102/249 (40%), Gaps = 42/249 (16%)
Query: 183 PKNEDVWLEACRLAR-----PDEAKGVVAKGVRQIP--------KSVRLWLQAA---ELD 226
P + D W L + D+ + + + V +P + + LW++ A EL+
Sbjct: 318 PADYDTWFSYITLGQESGLEADQIREIFERAVSNVPPHSKRLWRRYIFLWIKYAIWEELE 377
Query: 227 HDKANKSR-VLRMALDEIPDS----VRLW----KALVEISSEEEARILLHRAVECC---P 274
+ + K+R + + + IP ++W K + + EAR +L R + P
Sbjct: 378 NKEVEKAREIYKTCISIIPHKKFTFAKVWLLWAKFEIRHGNLPEARKILGRGLGMSGGKP 437
Query: 275 LDVELWLAL-ARLETYGVARSVLNKARKKLPKERAIWIAAAKLEEANGNTSMVGKIIERG 333
+ ++AL A+L + R + +K +K + A W+ A+LE+ G+ I E
Sbjct: 438 ALYKGYIALEAKLREFDRCRKLYDKYVEKFAEFAAPWMEYAELEQMLGDEERARAIFE-- 495
Query: 334 IRALQGEEVVIDRDTWMKEAEIAEKAGSDAEECKKRGSIETARAIFSHACTVFLTKKSIW 393
A+ E+ + W + E +AEE + + ARAI+ +W
Sbjct: 496 -LAVSQPEMEMPELVWKRFIEF------EAEE----ENYDRARAIYRQLLDRTHGHIKVW 544
Query: 394 LKAAQLEKT 402
+ AQ E T
Sbjct: 545 ISFAQFEVT 553
>sp|Q58741|Y1345_METJA TPR repeat-containing protein MJ1345 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1345 PE=4 SV=1
Length = 314
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 105/243 (43%), Gaps = 8/243 (3%)
Query: 454 IPNSEEIWLAAFKLEFENRELERARMLLAKARDMGGTERVWMKSAIVERELGNNAEERGF 513
I N +W F E R E+A +L+ K ++ + V+++ A + R LG N + +
Sbjct: 9 IYNESILWDEYFD-ALEKRNYEKALLLIDKILEVRESPDVYVRKARILRTLGENDKALEY 67
Query: 514 IEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSGCNQCPNCIPLWYSLANLEEKRN 573
++ LK P + + G L LG L+EAKE + C + +P+ Y A + +K
Sbjct: 68 FDKALKLKPKYILANFLKGALLVSLGKLEEAKEVFLKLCRLEKSDLPVKYVTAFILKK-- 125
Query: 574 GLNGLSKARAVLSVARLKNPLNPEIWLATIRAESKHGNKKEADSFIAKALQKCPN--SGI 631
L A ++ K P + W + G K++ AL+ P +
Sbjct: 126 -LGEYDYALKIIDKILKKYPKSAIAWAEKGEILYREGKLKKSLECFDNALKINPKDCQSL 184
Query: 632 LWAE--LIKMVPHHDRKSKGKDALVKSDRDPHVFAAVAKLFWHDRKVDKARNWFNKAVSL 689
L+ L K+ + + K ++++D + ++ + ++++A + KA+ L
Sbjct: 185 LYKGEILFKLGRYGEALKCLKKVFERNNKDIRALMYIIQILIYLGRLNQALEYTKKALKL 244
Query: 690 DPD 692
+PD
Sbjct: 245 NPD 247
>sp|P16522|CDC23_YEAST Anaphase-promoting complex subunit CDC23 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=CDC23 PE=1
SV=1
Length = 626
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 11/122 (9%)
Query: 253 LVEISSEEEARILLHRAVECCPLDVELWLAL----ARLETYGVARSVLNKARKKLPKERA 308
VE+S+ A RAV+ CP D + W L A L+ + + KA P +R
Sbjct: 441 FVELSNSHAAIECYRRAVDICPRDFKAWFGLGQAYALLDMHLYSLYYFQKACTLKPWDRR 500
Query: 309 IWIAAAKLEEANGNTSMVGKIIERGIRALQGEEVVIDRDT--WMKEAEIAEKAGSDAEEC 366
IW + GN K +R I+A Q +D++T + + A++ E+ D +EC
Sbjct: 501 IWQVLGECYSKTGNKVEAIKCYKRSIKASQ----TVDQNTSIYYRLAQLYEEL-EDLQEC 555
Query: 367 KK 368
KK
Sbjct: 556 KK 557
>sp|Q52DF3|SYF1_MAGO7 Pre-mRNA-splicing factor SYF1 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=SYF1 PE=3 SV=2
Length = 832
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 82/192 (42%), Gaps = 28/192 (14%)
Query: 238 MALDEIPDSVRLW-----KALVEISSEEEARILLHRAVECCPLDVE--LWLALARLET-Y 289
+ L P + LW KA+ S E R L +AVE CP ++L LE
Sbjct: 560 LDLFSYPVAFELWNMYLTKAVDRKISIERLRDLFEQAVEGCPPKFAKIIYLMYGNLEEER 619
Query: 290 GVARS---VLNKARKKLPKERAIWIAAAKLEEANGNTSMVG--KIIERGIRALQGEEVVI 344
G+AR + +A + + E + + ++ N + +I ER I AL +E
Sbjct: 620 GLARHAMRIYERATRAVSDEDRADMFNFYITKSASNFGLPSTRQIYERAIAALPDDEA-- 677
Query: 345 DRDTWMKEAEIAEKAGSDAEECKKRGSIETARAIFSHACTVF--LTKKSIWLKAAQLEKT 402
RD +K A++ K+ G I+ ARAI+ HA T + W K Q E
Sbjct: 678 -RDMCLKFADME----------KRLGEIDRARAIYGHASQFCDPRTTPAFWTKWEQFEVQ 726
Query: 403 HGSRESLIALLR 414
HG+ ++ +LR
Sbjct: 727 HGNEDTFKEMLR 738
>sp|Q6BSP7|CLF1_DEBHA Pre-mRNA-splicing factor CLF1 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=CLF1 PE=3 SV=2
Length = 714
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 52/132 (39%), Gaps = 1/132 (0%)
Query: 365 ECKKRGSIETARAIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQAE 424
E K AR+IF A V + W Q E +H + LL +AVT P+ +
Sbjct: 78 EVKHNHDFPRARSIFERALEVNVQHIPFWTHYIQFELSHKNITHARNLLDRAVTTLPRVD 137
Query: 425 VLWLMGAKEKWLAGDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERARMLLAKA 484
LW + + + + R I + + PN W A E E + AR + +
Sbjct: 138 KLWFLYVQTEETLKNYQMVRIIFERWLSWNPNP-SAWDAYINYEKRYDEYDNAREIYIRY 196
Query: 485 RDMGGTERVWMK 496
+ + +W+K
Sbjct: 197 VQIHSSGEIWLK 208
>sp|Q6CJK2|CLF1_KLULA Pre-mRNA-splicing factor CLF1 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=CLF1 PE=3 SV=1
Length = 684
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 101/431 (23%), Positives = 164/431 (38%), Gaps = 69/431 (16%)
Query: 262 ARILLHRAVECCPLDVELWLALARLE----TYGVARSVLNKARKKLPKERAIWIAAAKLE 317
AR + RA+ + LW+ E AR++L++A LP+ +W LE
Sbjct: 82 ARSIYERALLVDHGFIPLWIQYIDSEIKWKNINHARNLLDRATNALPRVDKLWFKYLLLE 141
Query: 318 EANGNTSMVGKIIERGIRALQGEEVVIDRDTWMKEAEIAEKAGSDAEECKKRGSIETARA 377
E+ GN +V I R G D W E + C + E R
Sbjct: 142 ESLGNQGIVRGIYTRWCSFEPGP------DAWDSFIEFETR-------C---LNFENVRN 185
Query: 378 IFSHACTVFLTKKSIWLKAAQLEKTHG---SRESLIALLRKAVTYF---PQAEVLWLMGA 431
I+S V + WLK + E+THG S ++ + +T F P ++ ++G+
Sbjct: 186 IYSKFVLVH-PQIDTWLKWVRFEQTHGDISSVRTVFSFALDTLTSFSGTPLVDIERVIGS 244
Query: 432 KEKWLA--GDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERARM---LLAKAR- 485
W A G+ +R + + A P SE L +++FE + M ++AK +
Sbjct: 245 FASWEASQGEYERSRTLYRLAVERWPISEA--LKEQQIQFEKKFGSSKNMEDIVIAKRKA 302
Query: 486 --------DMGGTERVWMKSAIVERELGNNAEE--RGFIE----------EGLKRFPSFF 525
D W+ +VE + + FIE KR+
Sbjct: 303 EYEQYLKSDPYHYSTWWVYIDLVEEKYQEQLTSAFQSFIELAKPKSLVKDSSWKRYIRIC 362
Query: 526 NLWLMLGQLEERLGHLKEAKEAYQSGCNQCPN----CIPLWYSLANLEEKRNGLNGLSKA 581
+L+ LE + L + YQ + P+ LW A E ++ N L KA
Sbjct: 363 VRYLVY--LELTINDLPTIRSVYQDILDIIPHKKFTFGKLWIMYAEFEIRQ---NNLLKA 417
Query: 582 RAVLSVARLKNPLNPEIWLATIRAESKHGNKKEADSFIAKALQKCPNSGILW---AELIK 638
R +L V+ K+P P+++ I E + K + P+S W AEL +
Sbjct: 418 RKILGVSLGKSP-KPKVFKYYINLEIRLKEFDRVRKLYEKYIDFNPSSVQSWLDYAELEE 476
Query: 639 MVPHHDRKSKG 649
+ DR S+G
Sbjct: 477 NLGDEDR-SRG 486
Score = 37.4 bits (85), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 12/166 (7%)
Query: 427 WLMGAKEKWLAGDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERARMLLAKARD 486
W+ A+ ++ D+ AR I + A +W+ E + + + AR LL +A +
Sbjct: 66 WMRYAQFEFDQKDIRRARSIYERALLVDHGFIPLWIQYIDSEIKWKNINHARNLLDRATN 125
Query: 487 -MGGTERVWMKSAIVERELGNNAEERGFIEEGLKRFPSFF---NLWLMLGQLEERLGHLK 542
+ +++W K ++E LGN RG R+ SF + W + E R + +
Sbjct: 126 ALPRVDKLWFKYLLLEESLGNQGIVRGI----YTRWCSFEPGPDAWDSFIEFETRCLNFE 181
Query: 543 EAKEAYQSGCNQCPNCIPLWYSLANLEEKRNGLNGLSKARAVLSVA 588
+ Y P I W E+ +S R V S A
Sbjct: 182 NVRNIYSKFVLVHPQ-IDTWLKWVRFEQTH---GDISSVRTVFSFA 223
>sp|Q5AED6|CLF1_CANAL Pre-mRNA-splicing factor CLF1 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=CLF1 PE=3 SV=2
Length = 758
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 58/146 (39%), Gaps = 3/146 (2%)
Query: 365 ECKKRGSIETARAIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQAE 424
E + AR+I A V + W++ QLE +H + L+ +A+ P+
Sbjct: 130 EIENNHDFPRARSILERALDVNIQHVPFWIQYIQLELSHKNINHARNLMERAINTLPRVN 189
Query: 425 VLWLMGAKEKWLAGDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERARMLLAKA 484
LW + + + + + P R + + P++ +W A E E E R + K
Sbjct: 190 KLWFLYVQTEEMLKNYPMVRAVFERWLDWHPDT-SVWDAYINFEARYEEKENVRTIFKKY 248
Query: 485 RDMGGTERVWMKSAIVERELGNNAEE 510
W K ++ E+ NN ++
Sbjct: 249 VHEFPNAGTWYK--WIKYEMENNRDD 272
Score = 40.4 bits (93), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 58/146 (39%), Gaps = 8/146 (5%)
Query: 503 ELGNNAE---ERGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSGCNQCPNCI 559
E+ NN + R +E L W+ QLE ++ A+ + N P
Sbjct: 130 EIENNHDFPRARSILERALDVNIQHVPFWIQYIQLELSHKNINHARNLMERAINTLPRVN 189
Query: 560 PLWYSLANLEEKRNGLNGLSKARAVLSVARLKNPLNPEIWLATIRAESKHGNKKEADSFI 619
LW+ EE L RAV +P + +W A I E+++ K+ +
Sbjct: 190 KLWFLYVQTEE---MLKNYPMVRAVFERWLDWHP-DTSVWDAYINFEARYEEKENVRTIF 245
Query: 620 AKALQKCPNSGILWAELIKMVPHHDR 645
K + + PN+G W + IK ++R
Sbjct: 246 KKYVHEFPNAGT-WYKWIKYEMENNR 270
Score = 37.7 bits (86), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 65/176 (36%), Gaps = 23/176 (13%)
Query: 224 ELDHDKANKSRVLRMALDEIPDSVRLWKALVEIS----SEEEARILLHRAVECCPLDVEL 279
E +HD +L ALD V W +++ + AR L+ RA+ P +L
Sbjct: 132 ENNHDFPRARSILERALDVNIQHVPFWIQYIQLELSHKNINHARNLMERAINTLPRVNKL 191
Query: 280 WLALAR----LETYGVARSVLNKARKKLPKERAIWIAAAKLEEANGNTSMVGKIIERGIR 335
W + L+ Y + R+V + P + ++W A E V I ++ +
Sbjct: 192 WFLYVQTEEMLKNYPMVRAVFERWLDWHP-DTSVWDAYINFEARYEEKENVRTIFKKYVH 250
Query: 336 ALQGEEVVIDRDTWMKEAEIAEKAGSDAEECKKRGSIETARAIFSHACTVFLTKKS 391
+ TW K + E R + T RA+F A L+ KS
Sbjct: 251 EFP------NAGTWYKWIKY--------EMENNRDDVNTVRAVFESAVDTLLSNKS 292
>sp|Q7SAK5|SYF1_NEUCR Pre-mRNA-splicing factor syf-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=syf-1 PE=3 SV=1
Length = 829
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 126/323 (39%), Gaps = 67/323 (20%)
Query: 159 ARLEELAKEEAAARKLITKGCNMCPKN----EDVWLE----ACRLARPDEAKGVVAKGVR 210
A+ E + ++AR+++ K + K+ D+W+E R DEA V+AK V+
Sbjct: 413 AKFYEAGGDLSSARRIMEKAVKVPYKSVAELADMWIEWAEMELRNECFDEAMKVMAKAVQ 472
Query: 211 ------------------QIPKSVRLWL-------QAAELDHDKANKSRVLRMALDEIPD 245
++ KS +LW + LD + R+ + +
Sbjct: 473 APKRSTVDYFDETLSPQQRVHKSWKLWSFYVDLVESVSSLDETRKVYERIFELRIATPQT 532
Query: 246 SVRLWKALVEISSEEEARILLHRAVE--CCPLDVELW-LALARLETYGVA----RSVLNK 298
V L E EE+ + R ++ P+ ELW L L + ++ R + +
Sbjct: 533 VVNYANLLEEHKYFEESFKIYERGLDLFSYPVAFELWNLYLTKAVDRKISIERLRDLFEQ 592
Query: 299 ARKKLPKE--RAIWIAAAKLEEANGNTSMVGKIIERGIRALQGEEVVIDRDTWMKEA--- 353
A + P + + I++ LEE G +I ER RA+ E+ + ++ ++
Sbjct: 593 AVEDCPPKFAKVIYLMYGNLEEERGLARHAMRIYERATRAVADEDRADMFNFYITKSASN 652
Query: 354 ----------EIAEKAGSDAEE---C-------KKRGSIETARAIFSHACTVF--LTKKS 391
E A A DAE C K+ G I+ ARAI+ HA T
Sbjct: 653 FGLPSTRPIYERAIAALPDAEARDMCLKFADMEKRLGEIDRARAIYGHASQFCDPRTNPG 712
Query: 392 IWLKAAQLEKTHGSRESLIALLR 414
W K Q E HG+ ++ +LR
Sbjct: 713 FWTKWDQFEVQHGNEDTYKEMLR 735
Score = 36.6 bits (83), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 62/152 (40%), Gaps = 16/152 (10%)
Query: 565 LANLEEKRNGLNGLSKARAVLSVARLKNPLNPEIWLATIRAESKHGNKKEADSFIAKALQ 624
L+ + ++R L+ +S+ ++NP + + WLA I + + G +E + +A
Sbjct: 4 LSRVSDRRPDLSLVSEEDFPYEQDIVRNPGSTKPWLAYIEYKLQKGTVQEQAYIMERACV 63
Query: 625 KCPNSGILWAELIKMVPHHDRK--------------SKGKDALVKSDRDPHVFAAVAKLF 670
+ P S LW ++ H K S + AL+ ++ P ++ K
Sbjct: 64 QLPRSYKLWKMYLRFRTKHVSKLNAAIFASEYQKVNSLFERALILLNKMPRIWEMYLKFL 123
Query: 671 WHDRKVDKARNWFNKAVSLDPDT--GDFWALY 700
V R F++A+ P T WALY
Sbjct: 124 MQQPLVTHTRRTFDRALRALPITQHNRIWALY 155
>sp|Q6CYA2|SYF1_KLULA Pre-mRNA-splicing factor SYF1 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=SYF1 PE=3 SV=1
Length = 798
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 124/313 (39%), Gaps = 37/313 (11%)
Query: 187 DVWLEACRLARPD-EAKGVVAKGVRQIPKSV-----RLWLQAAE--LDHDKANKSRVLRM 238
++W + CRL D E V+ +P +WL E L + +VL +
Sbjct: 413 ELWCQYCRLFEEDIEKSEVLLDKATNVPFKFLVDLENVWLYWCEYRLKRSIDDAIKVLSV 472
Query: 239 ALDEIPDSVRLWKALVEIS-SEEEARILLHRAVECCPLDVELWLALARLETYGVARSVLN 297
L EIPD+ L E S +A I + + LD+ L YG A +
Sbjct: 473 VL-EIPDNHELLLQKFEKGESPAQAAIFSSKRLWAMYLDL-----LEVKGNYGTAVNAYE 526
Query: 298 KARKKLPKERAIWIAAAKLEEANGNTSMVGKIIERGIRALQGEEVVIDRDTWMKEAEIAE 357
A A++I A L E++G+ + + ER + + + W ++A
Sbjct: 527 TAILIKAATPAMFINYALLNESSGHQAEALAVFERSVEIFPPS---VSKSIWDIYLDVAL 583
Query: 358 KAGSDAEECKKRGSIETARAIFSH--ACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRK 415
KA E+ KR E+A + + AC F K S E G E + +L K
Sbjct: 584 KADITKEQ--KRDIFESAIKLAASGVACVSFFEKYS------DFELNLGFHERSVEILHK 635
Query: 416 AVTYFPQAE---VLW--LMGAKEKWLAGDVPAARDILQEAYATIPNSEEI-WLAAFKLEF 469
E LW + EK L DV R + +E T+PNS+ I +L F +
Sbjct: 636 GAKNISDLESKCTLWEECINRSEKQL--DVNHTRKLYEECIETLPNSKAIKFLLPFAILE 693
Query: 470 ENR-ELERARMLL 481
E+R E+ R R LL
Sbjct: 694 ESRNEVARCRALL 706
>sp|Q02354|UTP6_YEAST U3 small nucleolar RNA-associated protein 6 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UTP6 PE=1
SV=2
Length = 440
Score = 42.4 bits (98), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 7/107 (6%)
Query: 534 LEERLGHLKEAKEAYQSGCNQCPNCIPLWYSLANLEEKRNGLNGLSKARAVLSVARLKNP 593
+++R+G + YQ G N+ P + W N + R K + + +P
Sbjct: 88 IQQRIGFI------YQRGTNKFPQDLKFWAMYLNYMKARGNQTSYKKIHNIYNQLLKLHP 141
Query: 594 LNPEIWLATIRAESK-HGNKKEADSFIAKALQKCPNSGILWAELIKM 639
N +IW++ + E + H N K + L+ P+ LW E +K
Sbjct: 142 TNVDIWISCAKYEYEVHANFKSCRNIFQNGLRFNPDVPKLWYEYVKF 188
>sp|Q6FW76|CLF1_CANGA Pre-mRNA-splicing factor CLF1 OS=Candida glabrata (strain ATCC 2001
/ CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=CLF1
PE=3 SV=1
Length = 695
Score = 41.6 bits (96), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%)
Query: 494 WMKSAIVERELGNNAEERGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSGCN 553
WM+ A+ E E + R E L+ S+ LW+ + E +LG++ A+ +
Sbjct: 64 WMRYAVFEIEQHDMRRARSIFERALRVHISYVPLWIRYIESELKLGYINHARNILERAIT 123
Query: 554 QCPNCIPLWYSLANLEE 570
+ P LWY +EE
Sbjct: 124 KLPRVDKLWYKYLIVEE 140
Score = 34.3 bits (77), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 87/233 (37%), Gaps = 23/233 (9%)
Query: 393 WLKAAQLE-KTHGSRESLIAL---LRKAVTYFPQAEVLWLMGAKEKWLAGDVPAARDILQ 448
W++ A E + H R + LR ++Y P LW+ + + G + AR+IL+
Sbjct: 64 WMRYAVFEIEQHDMRRARSIFERALRVHISYVP----LWIRYIESELKLGYINHARNILE 119
Query: 449 EAYATIPNSEEIWLAAFKLEFENRELERARMLLAKARDMGGTERVWMKSAIVERELGNNA 508
A +P +++W +E + R L K + VW E
Sbjct: 120 RAITKLPRVDKLWYKYLIVEESLAHFDIVRNLFQKWCSLEPAAHVWDSFTDFEVRQERYE 179
Query: 509 EERGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAY-----------QSGCNQCPN 557
+ R + + P F+ W E R G K + Y +S +
Sbjct: 180 DVRNIYSKYVLIHPQ-FSTWRKWINFEVRYGSTKTVRSVYSLALDALIAYSESRNELVDD 238
Query: 558 CIPLWYSLANLEEKRNGLNGLSKARAVLSVARLKNPLNPEIWLATIRAESKHG 610
CI L + E + +++++L +A K P + + A ++ E +HG
Sbjct: 239 CINLIVEFSKWEALQ---KEYIRSKSLLEIAIQKWPKSNTLNNALLQFEREHG 288
>sp|Q54WN5|UTP6_DICDI U3 small nucleolar RNA-associated protein 6 homolog
OS=Dictyostelium discoideum GN=utp6 PE=1 SV=1
Length = 609
Score = 41.6 bits (96), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 124/315 (39%), Gaps = 46/315 (14%)
Query: 204 VVAKGVRQIPKSVRLWLQAAELDHDKANK---SRVLRMALDEIPDSVRLWKALVEISSE- 259
+ ++ PK LW+ A + +A+K R+ +AL +P S +LWK E
Sbjct: 92 LFGSATKKFPKDEALWINALNIRMKRASKEGTGRLFSIALSNLPRSAKLWKLAATFEFEV 151
Query: 260 ----EEARILLHRAVECCPLDVELWLALARLETYGVA---------------------RS 294
+ AR L+ ++ D LW +E ++ +
Sbjct: 152 NKNIQNARNLIQAGIQFNKTDKSLWHYFFLMELTYISLLFSDITFIDKKIEEEEEEAIKL 211
Query: 295 VLNKARK--KLPKERAI-----WIAAAKLEEANGNTSMVGKIIER-GIRALQGEEVVIDR 346
L+ RK K+ K+ I ++A KL++++ + +I+ R I++ G++ R
Sbjct: 212 NLDSLRKSEKIEKDEFITFGKEILSADKLKQSSLIRGQIAQIVFRKAIKSSIGQDFDF-R 270
Query: 347 DTWMKEAEIAEKAGSDAEECKKRGSIETARAIFSHACTVFLTKKSIWLKAAQLEKTHGSR 406
+ K A G D+E G + + I T F ++ A +E++ S
Sbjct: 271 KHFYKIASKFLDIGKDSENPMGAGEL-LQKEILESLVTDFPNDDKTYIFLASIEQSKSSE 329
Query: 407 ESLIALLRKAVTYFPQAEVLWLMGAKEKWLAGDVPAARDILQEA----YATIPNSEEIWL 462
SL+ L + Q L ++ + E +L + R I+ + I N +I L
Sbjct: 330 PSLLKRLNNSTKILNQG--LTIIKS-ESYLFNYIHFIRQIIVDIKLKENKLIENITDILL 386
Query: 463 AAFKLEFENRELERA 477
A+K +N L+ +
Sbjct: 387 KAYKYSIDNNILKES 401
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 5/112 (4%)
Query: 395 KAAQLEKTHGSRESL---IALLRKAVTYFPQAEVLWLMGAKEKWLAGDVPAARDILQEAY 451
KA +E + R +L I L A FP+ E LW+ + + A
Sbjct: 72 KAKNIEFDYRLRSALRHAIILFGSATKKFPKDEALWINALNIRMKRASKEGTGRLFSIAL 131
Query: 452 ATIPNSEEIWLAAFKLEFE-NRELERARMLLAKARDMGGTER-VWMKSAIVE 501
+ +P S ++W A EFE N+ ++ AR L+ T++ +W ++E
Sbjct: 132 SNLPRSAKLWKLAATFEFEVNKNIQNARNLIQAGIQFNKTDKSLWHYFFLME 183
Score = 33.5 bits (75), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/101 (20%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 369 RGSIETARAIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVLWL 428
R ++ A +F A F +++W+ A + S+E L A++ P++ LW
Sbjct: 83 RSALRHAIILFGSATKKFPKDEALWINALNIRMKRASKEGTGRLFSIALSNLPRSAKLWK 142
Query: 429 MGAKEKW-LAGDVPAARDILQEAYATIPNSEEIWLAAFKLE 468
+ A ++ + ++ AR+++Q + +W F +E
Sbjct: 143 LAATFEFEVNKNIQNARNLIQAGIQFNKTDKSLWHYFFLME 183
>sp|Q4KLU2|PRP39_XENLA Pre-mRNA-processing factor 39 OS=Xenopus laevis GN=prpf39 PE=2 SV=1
Length = 641
Score = 41.6 bits (96), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 517 GLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSGCNQCPNCIPLWYSLANLEEKRNGL 575
++ +P FN W L Q E+ HL A++A+ + P C W A+LE+K N +
Sbjct: 62 SVQAYPEDFNTWTYLLQYVEQENHLFAARKAFDAFLAHYPYCYGYWKKYADLEKKNNNI 120
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 71/177 (40%), Gaps = 20/177 (11%)
Query: 310 WIAAAKLEEANGNTSMVGKIIERGIRALQGEEVVIDRDTWMKEAEIAEKAGSDAEECKKR 369
W + E NG+ + + ER + A E + W+K A+ E
Sbjct: 327 WKEYLEFELENGSNERIVILFERCVIACACYE-----EFWIKYAKYMEN----------- 370
Query: 370 GSIETARAIFSHACTVFLTKKS-IWLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVLWL 428
S+E R +++ AC V L KK + L A E+ G+ E +L+ T ++ L
Sbjct: 371 HSVEGVRHVYNRACHVHLAKKPMVHLLWAAFEEQQGNLEEARRILKNIETAIEGLAMVRL 430
Query: 429 MGAKEKWLAGDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERARMLLAKAR 485
+ G+V A +L+EA S E A KL R L + + + KAR
Sbjct: 431 RRVNLERRHGNVKEAEHLLEEAMNKTKTSSESSFYAIKLA---RHLFKVQANVVKAR 484
>sp|Q750X3|CLF1_ASHGO Pre-mRNA-splicing factor CLF1 OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CLF1 PE=3
SV=1
Length = 683
Score = 41.6 bits (96), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 91/240 (37%), Gaps = 18/240 (7%)
Query: 393 WLKAAQLEKTHGSRESLIALLRKAVTYFPQAEVLWLMGAKEKWLAGDVPAARDILQEAYA 452
WL+ A E ++ +A+ P V+WL + A DV AR++L A A
Sbjct: 63 WLRYAAFEYEQRDMRRARSVFERALAVAPGDVVVWLRYVDCELRARDVNHARNLLVRATA 122
Query: 453 TIPNSEEIWLAAFKLEFENRELERARMLLAKARDMGGTERVWMKSAIVERELGNNAEERG 512
+P +++W +E ++E R + K + W A V+ E E
Sbjct: 123 LLPRVDKLWYKYVLMEESLGQVELVRGVYTKWCTLEPAAAAW--DAFVDFETRQGQVEH- 179
Query: 513 FIEEGLKRFPSFFNL---WLMLGQLEERLGHLKEAKEAYQSGCN--------QCPNCIPL 561
+ E R+ + WL E + G + Y C+ L
Sbjct: 180 -VREVYSRYVMVHPVAATWLKWVAFERKHGDAGTVRRVYSLACDTLTAFAGADVHEVEQL 238
Query: 562 WYSLANLEEKRNGLNGLSKARAVLSVARLKNPLNPEIWLATIRAESKHGNKKEADSFIAK 621
S A E + L ++RAVLSVA + P + + AT + E K G + +S + K
Sbjct: 239 VVSFAEWEATQQELE---RSRAVLSVAVSRWPESSTLKDATAQLEKKFGGARAGESILFK 295
Score = 41.2 bits (95), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 61/149 (40%), Gaps = 25/149 (16%)
Query: 262 ARILLHRAVECCPLDVELWLALA----RLETYGVARSVLNKARKKLPKERAIWIAAAKLE 317
AR + RA+ P DV +WL R AR++L +A LP+ +W +E
Sbjct: 79 ARSVFERALAVAPGDVVVWLRYVDCELRARDVNHARNLLVRATALLPRVDKLWYKYVLME 138
Query: 318 EANGNTSMVGKIIERGIRALQGEEVVIDRDTW--MKEAEIAEKAGSDAEECKKRGSIETA 375
E+ G +V RG+ W ++ A A A D E ++G +E
Sbjct: 139 ESLGQVELV-----RGVYT-----------KWCTLEPAAAAWDAFVDFE--TRQGQVEHV 180
Query: 376 RAIFSHACTVFLTKKSIWLKAAQLEKTHG 404
R ++S V + WLK E+ HG
Sbjct: 181 REVYSRYVMVHPV-AATWLKWVAFERKHG 208
Score = 34.7 bits (78), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 72/186 (38%), Gaps = 16/186 (8%)
Query: 453 TIPNSE----EIWLAAFKLEFENRELERARMLLAKARDMGGTERVWMKSAIVERELGNNA 508
IPN++ + W+ + E +L++AR +L + M +++ +E +L
Sbjct: 386 VIPNTKFTFAKAWIMYAEFEIRQEKLDKARKILGMSLGMCPKPKLFQYYIDLEIKLKEFD 445
Query: 509 EERGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSGCN-----QCPNCIPLWY 563
R E+ L+ P + W+ +LEE LG A+ Y+ G + L
Sbjct: 446 RVRRLHEKLLEFQPDVLSNWIEYAELEENLGDEDRARGIYEIGLTADGGLSQARQLQLMQ 505
Query: 564 SLANLEEKRNGLNGLSKARAVLSVARLKNPLNPEIWLATIRAESKHGNKKEADSFIAKAL 623
E + +ARA+ S + +P +W++ ES + S+
Sbjct: 506 RYIQFE---TDASEFERARALYSRYVALSGYDPNVWISCALYESSVPTAAQVASYA---- 558
Query: 624 QKCPNS 629
PNS
Sbjct: 559 HDQPNS 564
>sp|Q9VF81|TMTC4_DROME Transmembrane and TPR repeat-containing protein CG5038
OS=Drosophila melanogaster GN=CG5038 PE=1 SV=1
Length = 705
Score = 41.2 bits (95), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 59/142 (41%), Gaps = 11/142 (7%)
Query: 491 ERVWMKSAIVERELGNNAEERGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQS 550
E M + RE G + +I L+ +P+F W+ LG ++ G +A +Y+
Sbjct: 478 ESALMNLGNLYREHGQLSTAEEYIRLALQAYPAFPAAWMNLGIVQSAQGKYDKALASYEK 537
Query: 551 GCNQCPNCIPLWYSLAN--LEEKR--NGLNGLSKARAVLSVARLKNPLNPEIWLATIRAE 606
N +Y++ N LE+KR L+ A A+ NP P+ W +
Sbjct: 538 ALKYRANFAVCYYNMGNLYLEQKRYAEALHHWQHAVAL-------NPRQPKAWANILTML 590
Query: 607 SKHGNKKEADSFIAKALQKCPN 628
G + +A +ALQ PN
Sbjct: 591 DNKGLQDDALRISNQALQHLPN 612
>sp|Q6CAR6|SYF1_YARLI Pre-mRNA-splicing factor SYF1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=SYF1 PE=3 SV=1
Length = 736
Score = 40.0 bits (92), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 109/262 (41%), Gaps = 18/262 (6%)
Query: 363 AEECKKRGSIETARAIFSHACTVFLTKKSIWLKAAQLEKTHGSRESLIALLRKAVTYFPQ 422
A+ + G+ E + ++ + L + A L + + E + + K ++ F +
Sbjct: 455 ADLVESYGTFEETKQVYEKIMALDLLTPLFVVNYATLLEENDHFEEMFKVYEKGISLFEE 514
Query: 423 AEV----LWLMGAKEKWLAGDVPAARDILQEAYATIPNSEEIWLAAFKLEFENRELERAR 478
+ L+L+ A + + RD+ ++A + P + +++ KLE E+R L R
Sbjct: 515 SAFEIWNLYLVKASPRL---GLERLRDLFEDAISKFPTQKALYILYGKLE-EDRGLVRNA 570
Query: 479 MLLAKAR-DMGGTERVWMKSAIVERELGNN--AEERGFIEEGLKRFPS--FFNLWLMLGQ 533
M + A D T + + R + N A R ++ L+ P+ L L Q
Sbjct: 571 MRVYSAMCDHVKTSETF--KYYIGRTVENFGLAATRPVYDKALESLPNKDASELALDYAQ 628
Query: 534 LEERLGHLKEAKEAYQSGCNQCPNCIPLWYSLANLEEKRNGLNGLSKARAVLSVAR-LKN 592
+EE+LG + A+ Y G I +Y + E +G K +L + R ++
Sbjct: 629 MEEKLGEIDRARAIYGYGSQFSDPQIIKYYDAWHKFEVAHGTEDTFK--DMLRIKRSIQA 686
Query: 593 PLNPEIWLATIRAESKHGNKKE 614
N +I AT AE K G +E
Sbjct: 687 QFNTDIHYATTAAEVKKGTVQE 708
>sp|Q9ULT0|TTC7A_HUMAN Tetratricopeptide repeat protein 7A OS=Homo sapiens GN=TTC7A PE=1
SV=3
Length = 858
Score = 39.7 bits (91), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 491 ERVWMKSAIVERELGNNAEERGF-IEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQ 549
E++W+++A + E + +E GF I+E FP+ ++ M G+L E G+L+EAK+ Y+
Sbjct: 711 EQIWLQAAELFME-QQHLKEAGFCIQEAAGLFPTSHSVLYMRGRLAEVKGNLEEAKQLYK 769
Query: 550 SGCNQCPNCIPLWYSLA 566
P+ + + +SL
Sbjct: 770 EALTVNPDGVRIMHSLG 786
Score = 37.0 bits (84), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 20/149 (13%)
Query: 437 AGDVPAARDILQEAYA--TIPNS-------------EEIWLAAFKLEFENRELERARMLL 481
A + A+R L+EA + T+P+S E+IWL A +L E + L+ A +
Sbjct: 677 ASSIAASR--LEEAMSELTMPSSVLKQGPMQLWTTLEQIWLQAAELFMEQQHLKEAGFCI 734
Query: 482 AKARDMGGTER--VWMKSAIVERELGNNAEERGFIEEGLKRFPSFFNLWLMLGQLEERLG 539
+A + T ++M+ + E + GN E + +E L P + LG + RLG
Sbjct: 735 QEAAGLFPTSHSVLYMRGRLAEVK-GNLEEAKQLYKEALTVNPDGVRIMHSLGLMLSRLG 793
Query: 540 HLKEAKEAYQSGCNQCPNCIPLWYSLANL 568
H A++ + + C W L +
Sbjct: 794 HKSLAQKVLRDAVERQSTCHEAWQGLGEV 822
>sp|Q9LEM8|NAC2_CHLRE PsbD mRNA maturation factor Nac2, chloroplastic OS=Chlamydomonas
reinhardtii GN=NAC2 PE=1 SV=1
Length = 1385
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 21/154 (13%)
Query: 201 AKGVVAKGVRQIPKSVRLWLQAAELDHDKAN----KSRVLR-MALDEIPDSVRLWKALVE 255
A+ V A+ +R+ P V L++ AA ++ + +N K R ALD + L VE
Sbjct: 970 ARIVAAEALRKCPADVALYVLAASVELEASNLELAKGYCQRAYALDRTDKQLFLIWPRVE 1029
Query: 256 --ISSEEEARILLHRAVECCPLDVELWLALARLE----TYGVARSVLNKARKKLP----- 304
+ ++AR+L RA++ PL+ ++ AR E +Y A + ++A + P
Sbjct: 1030 AGLGDRDKARLLFERALDAHPLNTKIINMYARFEAEEGSYREAAELYDRALQIDPLSPGP 1089
Query: 305 --KERAIWIAAAKLEEANGNTSMVGKIIERGIRA 336
RA W A +E GNT + +++E G+ A
Sbjct: 1090 GVHNRADW---ASMETDLGNTGLARQLLEEGLEA 1120
>sp|Q86TV6|TTC7B_HUMAN Tetratricopeptide repeat protein 7B OS=Homo sapiens GN=TTC7B PE=1
SV=3
Length = 843
Score = 38.1 bits (87), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 51/133 (38%), Gaps = 3/133 (2%)
Query: 492 RVWMKSAIVERELGNNAEERGFIEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSG 551
++W+ +A V +G AE +E FP N+ M GQ+ E G + EA+ Y+
Sbjct: 697 QIWLHAAEVYIGIGKPAEATACTQEAANLFPMSHNVLYMRGQIAELRGSMDEARRWYEEA 756
Query: 552 CNQCPNCIPLWYSLANLEEKRNGLNGLSKARAVLSVARLKNPLNPEIWLATIRAESKHGN 611
P + S+ L + L S A +L A N E+W GN
Sbjct: 757 LAISPTHVK---SMQRLALILHQLGRYSLAEKILRDAVQVNSTAHEVWNGLGEVLQAQGN 813
Query: 612 KKEADSFIAKALQ 624
A AL+
Sbjct: 814 DAAATECFLTALE 826
>sp|Q8BG19|TMTC4_MOUSE Transmembrane and TPR repeat-containing protein 4 OS=Mus musculus
GN=Tmtc4 PE=2 SV=1
Length = 741
Score = 37.7 bits (86), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 503 ELGNNAEERGFIEEG-------LKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSGCNQ- 554
LGN +ER ++E ++ P F W+ LG ++ L +EA+++Y++
Sbjct: 521 NLGNILKERNELQEAEELLSLAVQIQPDFAAAWMNLGIVQNSLKRFEEAEQSYRTAIKHR 580
Query: 555 --CPNCIPLWYSLANLEEKRNGLNGLSKARAVLSVARLKNPLNPE---IWLATIRAESKH 609
P+C +Y+L L N + L+ R L PE W I
Sbjct: 581 RKYPDC---YYNLGRLYADLN------RHVDALNAWRNATVLKPEHSLAWNNMIILLDNT 631
Query: 610 GNKKEADSFIAKALQKCPNSGILWAELIKMVPHHDRKSKGKDALVKSDR-DPHV---FAA 665
GN +A++ +ALQ PN L L ++ + + + +K+ + +P+V
Sbjct: 632 GNLAQAEAVGREALQLIPNDHSLMFSLANVLGKSQKYKESEALFLKAIKANPNVASYHGN 691
Query: 666 VAKLFWHDRKVDKARNWFNKAVSLDP 691
+A L+ +D A+ + ++ LDP
Sbjct: 692 LAVLYHRWGHLDSAKKHYEISLQLDP 717
>sp|Q5M990|TTC33_XENLA Tetratricopeptide repeat protein 33 OS=Xenopus laevis GN=ttc33 PE=2
SV=1
Length = 258
Score = 37.7 bits (86), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 515 EEGLKRFPSFFNLWLMLGQLEERLGHLKEAKEAYQSGCNQCPNCIPLW 562
E ++R P F W LG+ + LG + A ++Q G + CP LW
Sbjct: 117 ETAVQRNPHFVEAWQTLGRAQLSLGEITMAIRSFQIGLHICPANTELW 164
>sp|Q8BGB2|TTC7A_MOUSE Tetratricopeptide repeat protein 7A OS=Mus musculus GN=Ttc7a PE=1
SV=1
Length = 858
Score = 37.7 bits (86), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 8/80 (10%)
Query: 491 ERVWMKSA---IVERELGNNAEERGF-IEEGLKRFPSFFNLWLMLGQLEERLGHLKEAKE 546
E++W+++A + +R+L +E GF I+E FP+ ++ M G+L E G +EAK+
Sbjct: 711 EQIWLQAAELFMEQRQL----KEAGFCIQEAAGLFPTSHSVLYMRGRLAEVKGSFEEAKQ 766
Query: 547 AYQSGCNQCPNCIPLWYSLA 566
Y+ P+ + + +SL
Sbjct: 767 LYKEALTVNPDGVRIMHSLG 786
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 255,894,907
Number of Sequences: 539616
Number of extensions: 10426545
Number of successful extensions: 31013
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 29763
Number of HSP's gapped (non-prelim): 561
length of query: 701
length of database: 191,569,459
effective HSP length: 125
effective length of query: 576
effective length of database: 124,117,459
effective search space: 71491656384
effective search space used: 71491656384
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)