Query 040957
Match_columns 430
No_of_seqs 323 out of 2253
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 03:16:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040957.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040957hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rd7_A Acyl-COA thioesterase; 100.0 2.4E-61 8.3E-66 450.4 29.9 274 133-421 7-285 (286)
2 3u0a_A Acyl-COA thioesterase I 100.0 1.7E-60 5.9E-65 444.5 30.3 276 132-423 4-280 (285)
3 1c8u_A Acyl-COA thioesterase I 100.0 1.2E-57 4E-62 427.1 33.7 279 133-420 4-284 (285)
4 3rqb_A Uncharacterized protein 100.0 4.9E-49 1.7E-53 366.1 24.2 258 133-421 9-271 (275)
5 3cjy_A Putative thioesterase; 100.0 4.8E-47 1.7E-51 349.9 21.6 250 138-418 5-258 (259)
6 3bbj_A Putative thioesterase I 100.0 1.8E-44 6.3E-49 335.5 18.0 261 134-419 6-272 (272)
7 1tbu_A Peroxisomal acyl-coenzy 100.0 1.4E-29 4.6E-34 200.7 12.5 109 133-241 8-117 (118)
8 2z69_A DNR protein; beta barre 99.7 5.4E-17 1.9E-21 136.9 11.4 114 4-120 8-124 (154)
9 2pqq_A Putative transcriptiona 99.7 4.8E-17 1.6E-21 136.4 10.6 112 6-120 3-116 (149)
10 3mdp_A Cyclic nucleotide-bindi 99.7 2.1E-17 7.1E-22 137.5 8.0 111 7-120 5-120 (142)
11 3idb_B CAMP-dependent protein 99.7 3.2E-17 1.1E-21 139.7 9.3 113 4-120 34-148 (161)
12 3gyd_A CNMP-BD protein, cyclic 99.7 4.4E-17 1.5E-21 142.6 9.8 115 3-120 34-150 (187)
13 3dkw_A DNR protein; CRP-FNR, H 99.7 1.5E-16 5.3E-21 143.3 8.6 113 5-120 6-121 (227)
14 3dn7_A Cyclic nucleotide bindi 99.7 1.1E-16 3.7E-21 140.8 7.4 111 7-120 6-119 (194)
15 3fx3_A Cyclic nucleotide-bindi 99.7 1.1E-16 3.6E-21 145.5 7.2 117 1-120 4-122 (237)
16 1zyb_A Transcription regulator 99.6 6.1E-16 2.1E-20 140.1 11.4 114 4-120 14-132 (232)
17 3ocp_A PRKG1 protein; serine/t 99.6 5.1E-16 1.7E-20 128.8 9.5 109 4-120 19-129 (139)
18 3d0s_A Transcriptional regulat 99.6 2.6E-16 8.8E-21 142.0 8.1 113 5-120 3-117 (227)
19 3e97_A Transcriptional regulat 99.6 3.5E-16 1.2E-20 141.4 7.3 112 6-120 4-117 (231)
20 3pna_A CAMP-dependent protein 99.6 8.3E-16 2.8E-20 129.9 9.0 108 5-120 35-144 (154)
21 4ev0_A Transcription regulator 99.6 6.3E-16 2.1E-20 138.2 8.0 108 10-120 1-110 (216)
22 3iwz_A CAP-like, catabolite ac 99.6 1.3E-15 4.4E-20 137.5 10.1 113 5-120 8-123 (230)
23 3dv8_A Transcriptional regulat 99.6 1.3E-15 4.4E-20 136.5 9.1 111 7-120 2-116 (220)
24 4f8a_A Potassium voltage-gated 99.6 3.6E-15 1.2E-19 126.5 11.2 107 6-120 25-135 (160)
25 2d93_A RAP guanine nucleotide 99.6 1.7E-15 5.7E-20 124.8 8.1 109 4-120 12-124 (134)
26 1vp6_A CNBD, cyclic-nucleotide 99.6 1.9E-15 6.6E-20 124.9 7.3 107 4-120 7-115 (138)
27 1wgp_A Probable cyclic nucleot 99.6 8.9E-16 3.1E-20 126.9 5.1 110 7-120 5-127 (137)
28 4ava_A Lysine acetyltransferas 99.6 3.5E-15 1.2E-19 142.7 8.9 110 7-120 12-123 (333)
29 2ptm_A Hyperpolarization-activ 99.6 5.3E-15 1.8E-19 130.5 8.8 108 6-120 69-178 (198)
30 3tnp_B CAMP-dependent protein 99.6 8.1E-15 2.8E-19 144.3 9.8 112 5-120 142-255 (416)
31 3of1_A CAMP-dependent protein 99.5 1.2E-14 4.1E-19 132.4 10.1 110 3-120 2-113 (246)
32 3ryp_A Catabolite gene activat 99.5 1.5E-14 5.1E-19 128.6 10.1 104 14-120 2-108 (210)
33 2gau_A Transcriptional regulat 99.5 4.7E-15 1.6E-19 134.1 6.4 106 12-120 14-121 (232)
34 3shr_A CGMP-dependent protein 99.5 3.8E-14 1.3E-18 133.3 11.8 108 5-120 36-145 (299)
35 3shr_A CGMP-dependent protein 99.5 1.3E-14 4.3E-19 136.6 8.1 113 5-120 154-269 (299)
36 3ukn_A Novel protein similar t 99.5 3.8E-14 1.3E-18 126.4 10.8 103 10-120 77-183 (212)
37 2qcs_B CAMP-dependent protein 99.5 5.3E-14 1.8E-18 131.6 12.0 113 6-120 155-269 (291)
38 2oz6_A Virulence factor regula 99.5 3.9E-14 1.3E-18 125.5 10.5 99 19-120 1-105 (207)
39 3bpz_A Potassium/sodium hyperp 99.5 1.6E-14 5.5E-19 127.8 7.4 107 6-120 70-178 (202)
40 3kcc_A Catabolite gene activat 99.5 4.9E-14 1.7E-18 129.8 9.8 102 16-120 54-158 (260)
41 1o7f_A CAMP-dependent RAP1 gua 99.5 8.8E-14 3E-18 139.3 12.0 115 4-120 38-154 (469)
42 4din_B CAMP-dependent protein 99.5 2.2E-14 7.7E-19 139.6 7.2 113 6-120 246-360 (381)
43 3tnp_B CAMP-dependent protein 99.5 7.7E-14 2.6E-18 137.3 10.5 111 7-120 266-384 (416)
44 3e6c_C CPRK, cyclic nucleotide 99.5 5E-14 1.7E-18 128.9 8.0 116 1-120 1-117 (250)
45 3of1_A CAMP-dependent protein 99.5 6.4E-14 2.2E-18 127.5 8.5 108 6-120 123-232 (246)
46 1o5l_A Transcriptional regulat 99.5 3.9E-14 1.3E-18 126.4 6.4 106 12-120 3-111 (213)
47 2qcs_B CAMP-dependent protein 99.5 1.2E-13 3.9E-18 129.4 9.4 108 5-120 36-145 (291)
48 4din_B CAMP-dependent protein 99.4 9.2E-14 3.1E-18 135.2 8.0 108 5-120 127-236 (381)
49 2fmy_A COOA, carbon monoxide o 99.4 4.8E-14 1.6E-18 126.4 4.5 105 7-120 3-107 (220)
50 4f7z_A RAP guanine nucleotide 99.4 7.2E-13 2.5E-17 144.5 12.8 115 5-120 39-154 (999)
51 1ft9_A Carbon monoxide oxidati 99.4 9.7E-14 3.3E-18 124.6 3.9 103 9-120 1-103 (222)
52 1o7f_A CAMP-dependent RAP1 gua 99.4 9.7E-13 3.3E-17 131.7 11.5 109 5-120 334-446 (469)
53 2bgc_A PRFA; bacterial infecti 99.3 2.2E-12 7.4E-17 117.1 8.6 100 17-120 2-108 (238)
54 3la7_A Global nitrogen regulat 99.3 2.6E-12 8.8E-17 117.0 8.1 97 21-120 30-133 (243)
55 3cf6_E RAP guanine nucleotide 99.3 4E-12 1.4E-16 132.2 9.5 109 5-120 29-141 (694)
56 3b02_A Transcriptional regulat 99.3 7.9E-12 2.7E-16 109.6 9.1 80 34-116 2-82 (195)
57 4f7z_A RAP guanine nucleotide 99.3 9.6E-12 3.3E-16 135.7 11.3 109 5-120 334-446 (999)
58 2zcw_A TTHA1359, transcription 99.2 1.2E-11 4E-16 109.2 6.7 86 27-116 1-89 (202)
59 3beh_A MLL3241 protein; transm 99.2 2.4E-12 8.1E-17 124.1 0.1 104 7-120 227-332 (355)
60 3f1t_A Uncharacterized protein 98.4 1.8E-06 6.3E-11 71.6 9.4 81 161-241 51-139 (148)
61 3e29_A Uncharacterized protein 98.3 4.2E-06 1.4E-10 69.1 10.6 80 161-241 50-134 (144)
62 3dkz_A Thioesterase superfamil 98.3 1E-05 3.4E-10 66.6 11.7 79 161-241 45-129 (142)
63 1sc0_A Hypothetical protein HI 98.2 1.1E-05 3.6E-10 66.1 10.6 97 142-239 28-134 (138)
64 1vh9_A P15, hypothetical prote 98.2 7.1E-06 2.4E-10 68.1 9.8 83 161-244 52-141 (149)
65 3f5o_A Thioesterase superfamil 98.2 1.4E-05 4.8E-10 66.2 11.6 81 161-241 52-139 (148)
66 2gvh_A AGR_L_2016P; 15159470, 98.2 7E-05 2.4E-09 69.3 17.2 206 161-418 43-265 (288)
67 3nwz_A BH2602 protein; structu 98.2 7.7E-06 2.6E-10 70.0 9.8 80 161-241 78-164 (176)
68 1zki_A Hypothetical protein PA 98.2 1.1E-05 3.6E-10 65.6 10.1 79 161-240 46-130 (133)
69 2h4u_A Thioesterase superfamil 98.2 2.4E-05 8.2E-10 64.6 12.2 79 161-239 57-142 (145)
70 2qwz_A Phenylacetic acid degra 98.1 1.3E-05 4.3E-10 67.4 10.3 81 161-241 68-156 (159)
71 1wlu_A PAAI protein, phenylace 98.1 1.3E-05 4.5E-10 65.3 9.9 80 161-241 35-117 (136)
72 4i82_A Putative uncharacterize 98.1 1.3E-05 4.3E-10 65.6 9.6 81 161-241 42-126 (137)
73 1o0i_A Hypothetical protein HI 98.1 9.6E-06 3.3E-10 66.4 8.7 79 161-240 50-135 (138)
74 2pim_A Phenylacetic acid degra 98.1 2E-05 7E-10 64.6 9.8 79 161-240 53-137 (141)
75 1vh5_A Hypothetical protein YD 98.1 1.6E-05 5.6E-10 65.8 9.0 80 161-241 52-138 (148)
76 2hbo_A Hypothetical protein (N 98.0 1.6E-05 5.4E-10 66.7 8.8 81 161-241 58-142 (158)
77 3e8p_A Uncharacterized protein 98.0 1.4E-05 4.9E-10 67.4 8.3 78 161-239 65-162 (164)
78 3s4k_A Putative esterase RV184 98.0 1.5E-05 5E-10 65.8 7.5 80 161-241 51-140 (144)
79 3e1e_A Thioesterase family pro 98.0 1.6E-05 5.4E-10 65.3 7.4 79 161-240 50-138 (141)
80 2fs2_A Phenylacetic acid degra 98.0 4.8E-05 1.6E-09 63.2 10.2 81 161-241 49-133 (151)
81 3gek_A Putative thioesterase Y 97.9 5.2E-05 1.8E-09 62.5 10.1 81 161-241 44-131 (146)
82 3lw3_A HP0420 homologue; hotdo 97.9 7.3E-05 2.5E-09 61.3 10.8 80 162-241 53-133 (145)
83 1ixl_A Hypothetical protein PH 97.9 5.8E-05 2E-09 60.9 10.3 81 161-241 43-124 (131)
84 3lbe_A Putative uncharacterize 97.9 3.4E-05 1.2E-09 64.9 8.7 81 161-241 73-157 (163)
85 2f41_A Transcription factor FA 97.9 0.00011 3.8E-09 58.5 10.9 81 160-240 34-117 (121)
86 3bnv_A CJ0977; virulence facto 97.9 0.00012 4.1E-09 60.8 10.9 81 161-241 62-144 (152)
87 1q4t_A Thioesterase; hot-DOG, 97.9 4.2E-05 1.4E-09 63.5 8.2 79 161-240 60-146 (151)
88 3b7k_A Acyl-coenzyme A thioest 97.8 0.00097 3.3E-08 63.0 17.2 243 161-417 40-307 (333)
89 3gek_A Putative thioesterase Y 97.8 0.00015 5.1E-09 59.7 9.8 89 330-421 46-134 (146)
90 2f3x_A Transcription factor FA 97.8 0.00024 8.3E-09 59.2 11.1 81 160-240 70-153 (157)
91 3hdu_A Putative thioesterase; 97.7 3.3E-05 1.1E-09 64.6 5.8 78 161-239 58-155 (157)
92 2ov9_A Hypothetical protein; r 97.7 0.00015 5.1E-09 63.9 9.4 80 162-241 127-210 (216)
93 1sc0_A Hypothetical protein HI 97.7 0.00046 1.6E-08 56.2 11.4 102 314-419 35-137 (138)
94 2prx_A Thioesterase superfamil 97.6 0.00018 6.1E-09 60.3 8.7 80 162-241 55-151 (160)
95 4a0z_A Transcription factor FA 97.5 0.00076 2.6E-08 58.0 10.7 76 162-237 107-183 (190)
96 1vh9_A P15, hypothetical prote 97.5 0.0013 4.5E-08 54.2 11.7 88 330-421 54-141 (149)
97 3s4k_A Putative esterase RV184 97.5 0.00045 1.5E-08 56.7 8.7 91 330-421 53-143 (144)
98 1yoc_A Hypothetical protein PA 97.4 0.00029 1E-08 58.1 7.3 78 161-240 58-144 (147)
99 3dkz_A Thioesterase superfamil 97.4 0.0011 3.8E-08 54.1 10.7 88 330-423 47-134 (142)
100 4i82_A Putative uncharacterize 97.4 0.00083 2.8E-08 54.5 9.7 86 330-421 44-129 (137)
101 1o0i_A Hypothetical protein HI 97.4 0.0015 5.3E-08 53.0 11.2 86 329-418 51-136 (138)
102 3lbe_A Putative uncharacterize 97.3 0.0011 3.6E-08 55.7 9.5 86 330-421 75-160 (163)
103 3nwz_A BH2602 protein; structu 97.3 0.0019 6.5E-08 54.9 11.1 90 329-422 79-168 (176)
104 3f1t_A Uncharacterized protein 97.3 0.001 3.5E-08 54.8 9.1 89 329-420 52-141 (148)
105 3d6l_A Putative hydrolase; hot 97.3 0.0011 3.8E-08 53.6 8.9 81 161-241 21-115 (137)
106 4ien_A Putative acyl-COA hydro 97.3 0.0017 5.7E-08 54.5 10.2 83 160-242 28-121 (163)
107 1vh5_A Hypothetical protein YD 97.3 0.0031 1.1E-07 51.8 11.6 88 330-421 54-141 (148)
108 4ae8_A Thioesterase superfamil 97.3 0.00084 2.9E-08 58.7 8.5 81 161-241 119-204 (211)
109 1sh8_A Hypothetical protein PA 97.3 0.00032 1.1E-08 58.2 5.6 79 161-241 49-147 (154)
110 3f5o_A Thioesterase superfamil 97.2 0.0016 5.6E-08 53.5 9.7 89 329-421 53-142 (148)
111 3hdu_A Putative thioesterase; 97.2 0.0024 8.1E-08 53.1 10.3 102 314-416 41-155 (157)
112 4ae7_A Thioesterase superfamil 97.1 0.0014 4.7E-08 57.4 8.1 81 161-241 127-212 (220)
113 2q2b_A Cytosolic acyl coenzyme 97.1 0.0046 1.6E-07 52.6 10.9 80 161-240 41-133 (179)
114 2fs2_A Phenylacetic acid degra 97.0 0.0026 8.8E-08 52.5 8.8 86 330-421 51-136 (151)
115 3e29_A Uncharacterized protein 97.0 0.0025 8.5E-08 52.2 8.5 86 330-421 52-137 (144)
116 3e1e_A Thioesterase family pro 97.0 0.0031 1.1E-07 51.3 8.6 85 330-418 52-139 (141)
117 2qq2_A Cytosolic acyl coenzyme 96.9 0.0042 1.4E-07 53.6 9.6 81 160-240 56-149 (193)
118 1q4t_A Thioesterase; hot-DOG, 96.9 0.004 1.4E-07 51.4 8.7 88 330-420 62-149 (151)
119 4ae7_A Thioesterase superfamil 96.9 0.0083 2.8E-07 52.4 11.0 85 329-419 128-213 (220)
120 2qwz_A Phenylacetic acid degra 96.9 0.0034 1.1E-07 52.4 8.2 85 331-418 71-156 (159)
121 1y7u_A Acyl-COA hydrolase; str 96.9 0.0037 1.3E-07 53.0 8.5 81 161-241 34-125 (174)
122 2eis_A Hypothetical protein TT 96.8 0.014 4.6E-07 46.6 11.5 81 161-241 18-110 (133)
123 3bjk_A Acyl-COA thioester hydr 96.8 0.0099 3.4E-07 48.8 10.4 81 161-241 30-124 (153)
124 4ae8_A Thioesterase superfamil 96.8 0.0074 2.5E-07 52.7 9.8 84 329-418 120-204 (211)
125 2h4u_A Thioesterase superfamil 96.7 0.0085 2.9E-07 49.0 9.4 83 331-417 60-143 (145)
126 2hbo_A Hypothetical protein (N 96.7 0.0072 2.5E-07 50.2 9.1 86 330-421 60-145 (158)
127 3e8p_A Uncharacterized protein 96.7 0.0045 1.5E-07 51.9 7.4 86 329-415 66-161 (164)
128 1vpm_A Acyl-COA hydrolase; NP_ 96.7 0.0044 1.5E-07 52.2 7.4 80 161-240 38-128 (169)
129 2ov9_A Hypothetical protein; r 96.6 0.01 3.5E-07 52.1 9.8 83 330-418 128-210 (216)
130 1iq6_A (R)-hydratase, (R)-spec 96.6 0.018 6.2E-07 46.0 10.4 79 161-239 50-132 (134)
131 1sh8_A Hypothetical protein PA 96.6 0.011 3.7E-07 48.8 9.1 88 330-421 51-150 (154)
132 2b3n_A Hypothetical protein AF 96.5 0.023 7.9E-07 47.2 10.7 77 161-238 80-156 (159)
133 1t82_A Hypothetical acetyltran 96.4 0.0063 2.2E-07 50.4 6.7 97 142-240 36-151 (155)
134 2cye_A TTHA1846, putative thio 96.4 0.019 6.4E-07 45.7 9.4 81 160-240 19-108 (133)
135 2v1o_A Cytosolic acyl coenzyme 96.3 0.017 5.7E-07 47.4 8.6 80 161-240 14-110 (151)
136 1zki_A Hypothetical protein PA 96.3 0.022 7.7E-07 45.4 9.1 82 331-417 49-130 (133)
137 1ixl_A Hypothetical protein PH 96.2 0.044 1.5E-06 43.6 10.5 81 331-420 46-126 (131)
138 2oiw_A Putative 4-hydroxybenzo 96.2 0.045 1.5E-06 43.6 10.5 80 161-240 19-108 (136)
139 1yoc_A Hypothetical protein PA 96.1 0.023 7.7E-07 46.5 8.7 85 329-419 59-146 (147)
140 2pim_A Phenylacetic acid degra 96.1 0.021 7.2E-07 46.2 8.3 84 330-418 55-138 (141)
141 2egj_A Hypothetical protein AQ 95.9 0.055 1.9E-06 42.4 9.6 79 161-239 17-108 (128)
142 2gvh_A AGR_L_2016P; 15159470, 95.9 0.019 6.6E-07 52.7 7.7 81 160-240 173-264 (288)
143 2gf6_A Conserved hypothetical 95.8 0.03 1E-06 44.6 8.0 80 161-240 21-113 (135)
144 1wlu_A PAAI protein, phenylace 95.7 0.055 1.9E-06 43.3 9.1 82 331-420 38-119 (136)
145 3b7k_A Acyl-coenzyme A thioest 95.7 0.057 2E-06 50.7 10.4 81 161-241 214-308 (333)
146 1q6w_A Monoamine oxidase regul 95.6 0.033 1.1E-06 46.2 7.8 81 160-240 62-155 (161)
147 1z54_A Probable thioesterase; 95.5 0.12 4E-06 40.8 10.4 79 161-239 17-108 (132)
148 2own_A Putative oleoyl-[acyl-c 95.4 0.53 1.8E-05 42.2 15.5 188 185-417 63-256 (262)
149 3exz_A MAOC-like dehydratase; 95.4 0.1 3.5E-06 42.9 9.8 88 160-247 51-149 (154)
150 2cwz_A Thioesterase family pro 95.3 0.078 2.7E-06 42.9 8.7 76 163-238 33-115 (141)
151 4i83_A 3-hydroxyacyl-[acyl-car 95.3 0.13 4.5E-06 42.1 10.1 80 162-241 64-150 (152)
152 2oaf_A Thioesterase superfamil 95.3 0.091 3.1E-06 42.8 9.2 80 161-240 31-126 (151)
153 2cwz_A Thioesterase family pro 95.2 0.072 2.4E-06 43.2 8.0 60 360-419 60-119 (141)
154 2fuj_A Conserved hypothetical 95.1 0.18 6.2E-06 40.0 10.2 81 160-240 24-117 (137)
155 1s5u_A Protein YBGC; structura 95.1 0.088 3E-06 41.9 8.3 80 161-240 22-115 (138)
156 2prx_A Thioesterase superfamil 95.1 0.037 1.3E-06 45.8 6.1 90 330-420 56-153 (160)
157 3lmb_A Uncharacterized protein 94.9 0.016 5.5E-07 48.4 3.3 98 143-240 33-161 (165)
158 2hx5_A Hypothetical protein; t 94.8 0.14 4.9E-06 41.6 9.1 80 161-240 22-122 (152)
159 1lo7_A 4-hydroxybenzoyl-COA th 94.7 0.2 7E-06 39.8 9.7 79 161-239 19-118 (141)
160 3d6x_A (3R)-hydroxymyristoyl-[ 94.5 0.24 8.3E-06 40.1 9.6 50 191-240 94-143 (146)
161 3ir3_A HTD2, 3-hydroxyacyl-thi 94.4 0.25 8.7E-06 40.2 9.5 81 161-241 60-143 (148)
162 1t82_A Hypothetical acetyltran 94.4 0.065 2.2E-06 44.2 5.9 83 330-418 59-152 (155)
163 2q78_A Uncharacterized protein 94.3 0.2 6.8E-06 40.9 8.5 77 162-238 46-128 (153)
164 2gll_A FABZ, (3R)-hydroxymyris 94.2 0.21 7.1E-06 41.9 8.8 50 191-240 118-167 (171)
165 3ck1_A Putative thioesterase; 94.1 0.17 5.8E-06 40.9 7.8 80 161-240 20-115 (150)
166 3kuv_A Fluoroacetyl coenzyme A 94.1 0.23 8E-06 39.9 8.4 75 163-237 39-119 (139)
167 2nuj_A Thioesterase superfamil 94.0 0.14 4.7E-06 42.4 7.3 80 160-239 40-133 (163)
168 2eis_A Hypothetical protein TT 93.8 0.76 2.6E-05 36.0 11.1 53 367-419 53-111 (133)
169 1njk_A Hypothetical protein YB 93.8 0.34 1.2E-05 39.6 9.2 81 160-240 36-130 (156)
170 4h4g_A (3R)-hydroxymyristoyl-[ 93.5 0.68 2.3E-05 38.2 10.5 80 162-241 67-154 (160)
171 2o5u_A Thioesterase; putative 93.4 0.37 1.3E-05 38.8 8.7 79 161-239 29-120 (148)
172 2hlj_A Hypothetical protein; p 93.3 0.76 2.6E-05 37.2 10.6 80 160-239 19-113 (157)
173 2ess_A Acyl-ACP thioesterase; 93.2 3.4 0.00012 36.4 15.6 54 185-238 60-114 (248)
174 1u1z_A (3R)-hydroxymyristoyl-[ 93.1 0.49 1.7E-05 39.4 9.1 51 191-241 114-164 (168)
175 2ali_A Hypothetical protein PA 92.9 0.45 1.5E-05 39.0 8.6 79 161-239 44-135 (158)
176 2pzh_A Hypothetical protein HP 92.8 0.32 1.1E-05 38.4 7.4 79 161-239 15-112 (135)
177 2w3x_A CALE7; hydrolase, hotdo 92.8 0.46 1.6E-05 38.1 8.5 79 161-239 21-115 (147)
178 1z6b_A Pffabz, fatty acid synt 92.8 0.99 3.4E-05 36.8 10.5 49 191-239 100-151 (154)
179 1q6w_A Monoamine oxidase regul 92.7 0.35 1.2E-05 39.8 7.7 58 363-420 96-158 (161)
180 3k67_A Putative dehydratase AF 92.7 1.1 3.9E-05 36.8 10.7 77 160-237 79-155 (159)
181 3d6l_A Putative hydrolase; hot 92.6 0.33 1.1E-05 38.6 7.1 59 361-419 49-116 (137)
182 2xem_A DYNE7, TEBC; biosynthet 92.6 0.79 2.7E-05 37.0 9.6 79 161-239 25-120 (150)
183 3bnv_A CJ0977; virulence facto 92.5 0.49 1.7E-05 38.6 8.2 59 361-420 87-146 (152)
184 2egj_A Hypothetical protein AQ 92.0 0.52 1.8E-05 36.5 7.6 57 361-418 54-110 (128)
185 3ck1_A Putative thioesterase; 91.8 0.5 1.7E-05 38.0 7.4 59 361-419 59-117 (150)
186 2fuj_A Conserved hypothetical 91.7 3 0.0001 32.6 12.0 60 360-419 58-119 (137)
187 4ffu_A Oxidase; structural gen 91.5 0.78 2.7E-05 38.5 8.5 80 161-240 79-167 (176)
188 2cye_A TTHA1846, putative thio 91.4 0.62 2.1E-05 36.5 7.5 59 360-419 52-110 (133)
189 2hlj_A Hypothetical protein; p 91.4 1.6 5.4E-05 35.3 10.2 60 360-419 56-116 (157)
190 2q2b_A Cytosolic acyl coenzyme 91.1 1.1 3.8E-05 37.6 9.1 84 331-418 44-134 (179)
191 2oiw_A Putative 4-hydroxybenzo 90.7 0.79 2.7E-05 36.1 7.4 59 360-419 52-110 (136)
192 2qq2_A Cytosolic acyl coenzyme 90.6 1.2 4E-05 38.0 8.8 84 331-418 60-150 (193)
193 3hm0_A Probable thioesterase; 90.4 1 3.6E-05 37.2 8.2 79 161-239 51-146 (167)
194 3exz_A MAOC-like dehydratase; 90.3 0.77 2.6E-05 37.5 7.2 60 362-421 80-146 (154)
195 1njk_A Hypothetical protein YB 90.2 1 3.5E-05 36.6 7.9 59 361-419 73-132 (156)
196 1s5u_A Protein YBGC; structura 90.2 0.96 3.3E-05 35.6 7.6 59 360-419 58-117 (138)
197 3qoo_A Uncharacterized protein 90.0 3.2 0.00011 33.1 10.3 75 163-237 37-118 (138)
198 3r87_A Putative uncharacterize 89.8 0.63 2.1E-05 36.8 6.1 55 184-238 56-112 (135)
199 2gf6_A Conserved hypothetical 89.5 2.7 9.1E-05 32.7 9.7 59 360-419 57-115 (135)
200 2nuj_A Thioesterase superfamil 89.5 1.4 4.7E-05 36.1 8.2 59 360-418 75-135 (163)
201 2w3x_A CALE7; hydrolase, hotdo 89.3 1 3.5E-05 35.9 7.2 61 360-420 57-119 (147)
202 3r87_A Putative uncharacterize 89.2 0.93 3.2E-05 35.7 6.8 60 361-420 57-117 (135)
203 3bjk_A Acyl-COA thioester hydr 89.2 2 6.8E-05 34.6 8.9 55 364-418 62-124 (153)
204 2f41_A Transcription factor FA 89.0 0.91 3.1E-05 35.3 6.4 54 361-415 60-115 (121)
205 2own_A Putative oleoyl-[acyl-c 88.8 4 0.00014 36.3 11.4 79 160-238 175-254 (262)
206 2hx5_A Hypothetical protein; t 88.6 1.6 5.6E-05 35.1 8.0 58 361-419 67-124 (152)
207 2o5u_A Thioesterase; putative 88.5 1.3 4.6E-05 35.4 7.3 60 360-419 63-123 (148)
208 2xem_A DYNE7, TEBC; biosynthet 88.5 1.7 5.9E-05 34.9 8.0 59 361-419 62-123 (150)
209 1iq6_A (R)-hydratase, (R)-spec 88.4 1.4 4.9E-05 34.5 7.4 54 364-417 78-133 (134)
210 3ir3_A HTD2, 3-hydroxyacyl-thi 87.9 2.1 7.4E-05 34.5 8.2 57 364-420 88-145 (148)
211 2v1o_A Cytosolic acyl coenzyme 87.9 5.1 0.00018 32.0 10.6 58 361-418 48-111 (151)
212 1lo7_A 4-hydroxybenzoyl-COA th 87.8 1.5 5E-05 34.6 7.1 58 361-418 59-120 (141)
213 1z54_A Probable thioesterase; 87.8 1.5 5.1E-05 34.1 7.1 57 361-418 54-110 (132)
214 3khp_A MAOC family protein; de 87.2 3.5 0.00012 37.9 10.0 75 161-237 226-306 (311)
215 1vpm_A Acyl-COA hydrolase; NP_ 86.9 1.7 5.7E-05 36.0 7.1 60 360-419 65-130 (169)
216 2oaf_A Thioesterase superfamil 86.7 1.8 6E-05 34.8 7.0 57 361-418 71-127 (151)
217 2ali_A Hypothetical protein PA 86.6 3.8 0.00013 33.2 9.1 59 360-418 77-137 (158)
218 4i4j_A ACP-polyene thioesteras 86.4 2 6.7E-05 35.0 7.2 78 161-238 26-121 (159)
219 1s9c_A Peroxisomal multifuncti 86.4 1.8 6.1E-05 39.6 7.7 78 161-241 211-290 (298)
220 2q78_A Uncharacterized protein 86.4 5 0.00017 32.6 9.3 60 360-420 74-133 (153)
221 2c2i_A RV0130; hotdog, hydrata 86.3 1 3.5E-05 36.4 5.4 79 160-238 57-147 (151)
222 2b3n_A Hypothetical protein AF 86.1 2.3 8E-05 34.8 7.5 54 363-417 105-158 (159)
223 1y7u_A Acyl-COA hydrolase; str 86.0 2.4 8.3E-05 35.2 7.7 58 361-418 62-125 (174)
224 4ien_A Putative acyl-COA hydro 85.6 4.6 0.00016 33.1 9.1 58 361-418 57-120 (163)
225 3kh8_A MAOC-like dehydratase; 83.6 3.6 0.00012 38.2 8.3 79 161-241 246-327 (332)
226 4i4j_A ACP-polyene thioesteras 83.6 2.9 0.0001 33.9 7.0 61 360-420 62-126 (159)
227 2pzh_A Hypothetical protein HP 83.5 3.3 0.00011 32.2 7.1 60 360-419 48-115 (135)
228 1pn2_A Peroxisomal hydratase-d 83.1 3.5 0.00012 37.3 7.9 76 160-240 199-275 (280)
229 3qoo_A Uncharacterized protein 83.1 7.6 0.00026 30.9 8.9 59 361-420 66-124 (138)
230 3d6x_A (3R)-hydroxymyristoyl-[ 83.0 3.4 0.00012 33.0 7.1 56 361-418 89-144 (146)
231 4ffu_A Oxidase; structural gen 82.8 3.7 0.00013 34.2 7.4 55 367-421 110-171 (176)
232 3hm0_A Probable thioesterase; 82.7 5.9 0.0002 32.5 8.6 59 360-419 91-149 (167)
233 4b0b_A 3-hydroxydecanoyl-[acyl 81.9 8 0.00027 32.0 9.0 77 159-235 75-158 (171)
234 3kuv_A Fluoroacetyl coenzyme A 81.8 5.3 0.00018 31.9 7.6 60 360-420 66-125 (139)
235 3lw3_A HP0420 homologue; hotdo 81.7 8.9 0.0003 30.8 8.9 78 331-417 55-132 (145)
236 3khp_A MAOC family protein; de 81.3 2.7 9.3E-05 38.7 6.5 60 361-420 99-165 (311)
237 2bi0_A Hypothetical protein RV 81.2 11 0.00039 34.9 10.8 77 161-239 65-155 (337)
238 3q62_A 3-hydroxydecanoyl-[acyl 80.5 9.8 0.00033 31.6 9.1 77 159-235 79-162 (175)
239 4e3e_A MAOC domain protein deh 79.1 6.5 0.00022 36.8 8.5 55 367-421 92-152 (352)
240 3rns_A Cupin 2 conserved barre 78.8 12 0.00041 32.4 9.7 70 31-112 39-108 (227)
241 2f3x_A Transcription factor FA 78.7 4.1 0.00014 33.2 6.1 54 361-415 96-151 (157)
242 2gll_A FABZ, (3R)-hydroxymyris 77.4 6.2 0.00021 32.6 7.0 56 361-418 113-168 (171)
243 3bbj_A Putative thioesterase I 76.4 3.8 0.00013 36.8 5.8 51 364-416 59-109 (272)
244 2ess_A Acyl-ACP thioesterase; 76.0 11 0.00037 33.1 8.7 59 360-418 59-117 (248)
245 4h4g_A (3R)-hydroxymyristoyl-[ 74.9 8.8 0.0003 31.3 7.1 59 361-421 99-157 (160)
246 1s9c_A Peroxisomal multifuncti 74.4 5.7 0.0002 36.2 6.6 59 361-420 87-149 (298)
247 1u1z_A (3R)-hydroxymyristoyl-[ 73.6 9.2 0.00031 31.4 7.1 56 361-418 109-164 (168)
248 4i83_A 3-hydroxyacyl-[acyl-car 73.1 8.5 0.00029 31.0 6.6 57 360-418 94-150 (152)
249 3fjs_A Uncharacterized protein 72.8 21 0.00073 26.8 8.6 65 33-109 40-104 (114)
250 4a0z_A Transcription factor FA 72.8 20 0.00069 30.1 9.1 52 360-412 130-181 (190)
251 1pn2_A Peroxisomal hydratase-d 71.9 6.6 0.00023 35.4 6.2 62 360-421 70-137 (280)
252 3cjy_A Putative thioesterase; 70.5 8.3 0.00028 34.3 6.5 48 365-413 58-105 (259)
253 2ozj_A Cupin 2, conserved barr 69.1 20 0.0007 26.7 7.7 64 35-110 44-107 (114)
254 3lwc_A Uncharacterized protein 67.6 14 0.00047 28.4 6.4 67 33-111 44-110 (119)
255 4gak_A Acyl-ACP thioesterase; 67.5 14 0.00047 32.5 7.3 54 185-238 59-113 (250)
256 2cf2_C Fatty acid synthase, DH 67.3 35 0.0012 31.6 10.3 73 163-235 79-158 (342)
257 2cf2_C Fatty acid synthase, DH 66.8 26 0.00088 32.5 9.2 69 167-235 254-329 (342)
258 3oml_A GH14720P, peroxisomal m 66.4 12 0.00041 37.9 7.4 75 161-238 521-597 (613)
259 3es1_A Cupin 2, conserved barr 64.8 9.5 0.00032 31.6 5.2 70 31-110 81-150 (172)
260 2c2i_A RV0130; hotdog, hydrata 64.4 11 0.00039 29.9 5.7 52 366-417 92-149 (151)
261 4e3e_A MAOC domain protein deh 63.9 41 0.0014 31.2 10.1 80 161-240 60-148 (352)
262 1yhf_A Hypothetical protein SP 62.0 45 0.0015 24.6 9.0 66 33-110 44-109 (115)
263 4gak_A Acyl-ACP thioesterase; 61.2 22 0.00075 31.2 7.4 59 361-419 59-117 (250)
264 1z6b_A Pffabz, fatty acid synt 58.4 26 0.00089 28.0 6.8 50 367-417 100-152 (154)
265 2v2f_A Penicillin binding prot 57.8 5.5 0.00019 21.4 1.7 16 397-412 6-21 (26)
266 1dgw_A Canavalin; duplicated s 57.6 11 0.00037 31.3 4.4 53 31-88 43-95 (178)
267 3oml_A GH14720P, peroxisomal m 57.5 17 0.00059 36.7 6.7 61 360-420 394-458 (613)
268 3h8u_A Uncharacterized conserv 57.2 49 0.0017 24.9 8.0 70 32-110 42-112 (125)
269 2pfw_A Cupin 2, conserved barr 57.2 56 0.0019 24.1 8.3 67 32-110 37-103 (116)
270 2o1q_A Putative acetyl/propion 56.9 22 0.00074 28.3 6.0 73 31-112 46-118 (145)
271 2bi0_A Hypothetical protein RV 54.1 36 0.0012 31.5 7.8 59 363-421 91-160 (337)
272 3kh8_A MAOC-like dehydratase; 53.4 24 0.00081 32.6 6.3 61 359-420 121-186 (332)
273 3kgz_A Cupin 2 conserved barre 50.6 25 0.00085 28.4 5.4 68 34-111 49-116 (156)
274 2gu9_A Tetracenomycin polyketi 50.0 32 0.0011 25.2 5.7 47 32-87 24-73 (113)
275 1v70_A Probable antibiotics sy 49.9 57 0.002 23.2 7.1 46 33-87 32-78 (105)
276 1o5u_A Novel thermotoga mariti 49.5 43 0.0015 24.6 6.2 59 20-88 21-80 (101)
277 4e2g_A Cupin 2 conserved barre 49.4 31 0.0011 26.1 5.7 47 32-87 44-90 (126)
278 3rns_A Cupin 2 conserved barre 49.2 69 0.0024 27.4 8.5 66 33-110 157-223 (227)
279 1tbu_A Peroxisomal acyl-coenzy 49.0 39 0.0013 25.9 5.9 45 366-411 66-110 (118)
280 3zen_D Fatty acid synthase; tr 47.9 88 0.003 38.0 11.2 79 161-239 1263-1344(3089)
281 3ibm_A Cupin 2, conserved barr 47.2 65 0.0022 26.1 7.6 70 33-112 60-130 (167)
282 1o4t_A Putative oxalate decarb 46.5 44 0.0015 25.8 6.2 45 33-86 61-106 (133)
283 3fz3_A Prunin; TREE NUT allerg 46.2 35 0.0012 33.5 6.5 61 25-88 390-451 (531)
284 2d5f_A Glycinin A3B4 subunit; 45.8 35 0.0012 33.4 6.5 80 26-111 364-445 (493)
285 3k67_A Putative dehydratase AF 45.6 64 0.0022 26.0 7.2 52 363-415 105-156 (159)
286 3c3v_A Arachin ARAH3 isoform; 45.2 32 0.0011 33.8 6.1 60 26-88 369-429 (510)
287 3esi_A Uncharacterized protein 45.0 77 0.0026 24.6 7.2 49 191-240 71-121 (129)
288 3d0j_A Uncharacterized protein 44.9 54 0.0019 25.9 6.2 61 47-113 48-110 (140)
289 3es4_A Uncharacterized protein 44.8 23 0.0008 27.1 4.0 46 35-89 48-93 (116)
290 1fxz_A Glycinin G1; proglycini 43.9 34 0.0011 33.4 6.0 55 31-88 340-395 (476)
291 3q62_A 3-hydroxydecanoyl-[acyl 43.8 52 0.0018 27.1 6.4 57 361-419 109-169 (175)
292 3bcw_A Uncharacterized protein 43.2 30 0.001 26.7 4.6 46 34-88 54-99 (123)
293 3jzv_A Uncharacterized protein 42.1 30 0.001 28.2 4.7 68 34-111 58-125 (166)
294 1vj2_A Novel manganese-contain 41.7 70 0.0024 24.2 6.6 46 33-87 52-97 (126)
295 2f4p_A Hypothetical protein TM 41.7 95 0.0033 24.3 7.6 71 33-112 52-122 (147)
296 1fi2_A Oxalate oxidase, germin 41.1 60 0.002 27.2 6.6 55 31-88 74-131 (201)
297 3lmb_A Uncharacterized protein 40.9 31 0.0011 28.2 4.5 76 332-412 57-156 (165)
298 2bnm_A Epoxidase; oxidoreducta 40.4 50 0.0017 27.3 6.0 69 34-110 122-196 (198)
299 3d82_A Cupin 2, conserved barr 39.2 1E+02 0.0034 21.8 6.9 51 50-112 51-101 (102)
300 3rqb_A Uncharacterized protein 38.8 61 0.0021 28.8 6.6 48 363-412 62-109 (275)
301 2qjv_A Uncharacterized IOLB-li 38.6 1.2E+02 0.0042 26.9 8.2 76 30-113 30-111 (270)
302 1sfn_A Conserved hypothetical 38.6 91 0.0031 27.0 7.6 49 31-88 167-216 (246)
303 2vqa_A SLL1358 protein, MNCA; 37.5 48 0.0016 30.6 5.9 71 33-110 56-129 (361)
304 4b0b_A 3-hydroxydecanoyl-[acyl 37.5 69 0.0024 26.2 6.1 57 361-419 105-165 (171)
305 1j58_A YVRK protein; cupin, de 37.2 45 0.0015 31.2 5.7 52 32-87 82-133 (385)
306 3h7j_A Bacilysin biosynthesis 36.8 90 0.0031 26.9 7.3 71 31-111 36-107 (243)
307 2pyt_A Ethanolamine utilizatio 36.6 40 0.0014 26.3 4.4 64 33-110 61-124 (133)
308 2e9q_A 11S globulin subunit be 35.9 63 0.0022 31.2 6.5 59 27-88 320-379 (459)
309 4b8u_A 3-hydroxydecanoyl-[acyl 35.6 1.8E+02 0.0062 23.7 10.7 86 149-235 66-158 (171)
310 3ebr_A Uncharacterized RMLC-li 34.4 55 0.0019 26.4 5.0 69 31-113 44-116 (159)
311 1sfn_A Conserved hypothetical 34.1 2.2E+02 0.0076 24.5 9.4 65 33-111 54-118 (246)
312 2q1z_B Anti-sigma factor CHRR, 33.7 1.1E+02 0.0037 25.5 7.0 64 31-110 127-192 (195)
313 1yfu_A 3-hydroxyanthranilate-3 33.5 37 0.0013 28.0 3.7 60 48-115 54-114 (174)
314 2cav_A Protein (canavalin); vi 33.4 37 0.0013 32.8 4.4 52 32-88 89-140 (445)
315 2fqp_A Hypothetical protein BP 33.1 27 0.00093 25.2 2.7 49 33-88 22-71 (97)
316 3i7d_A Sugar phosphate isomera 32.7 67 0.0023 25.9 5.3 70 33-112 47-120 (163)
317 2xp1_A SPT6; transcription, IW 32.6 57 0.0019 27.0 4.8 39 12-56 13-51 (178)
318 2b8m_A Hypothetical protein MJ 32.2 47 0.0016 24.7 4.1 46 34-87 32-77 (117)
319 1j58_A YVRK protein; cupin, de 32.2 1.2E+02 0.0039 28.3 7.7 75 33-112 261-336 (385)
320 2q30_A Uncharacterized protein 32.1 1.2E+02 0.0039 21.8 6.3 66 33-109 37-104 (110)
321 4i4a_A Similar to unknown prot 31.9 67 0.0023 24.2 5.0 47 33-88 38-84 (128)
322 2vqa_A SLL1358 protein, MNCA; 31.6 66 0.0023 29.7 5.8 53 32-88 237-290 (361)
323 3u0a_A Acyl-COA thioesterase I 31.6 91 0.0031 27.8 6.5 48 364-412 60-107 (285)
324 1c8u_A Acyl-COA thioesterase I 31.5 89 0.003 27.8 6.4 47 365-412 58-104 (285)
325 2ea7_A 7S globulin-1; beta bar 30.6 45 0.0015 32.0 4.5 53 31-88 63-115 (434)
326 3rd7_A Acyl-COA thioesterase; 30.4 96 0.0033 27.7 6.4 47 364-411 59-105 (286)
327 1sq4_A GLXB, glyoxylate-induce 30.4 70 0.0024 28.5 5.5 47 31-86 193-240 (278)
328 2vpv_A Protein MIF2, MIF2P; nu 30.3 82 0.0028 25.7 5.4 53 48-110 109-161 (166)
329 4b29_A Dimethylsulfoniopropion 30.2 91 0.0031 26.7 5.8 32 47-86 150-181 (217)
330 1y9q_A Transcriptional regulat 30.1 90 0.0031 25.6 5.9 44 34-86 109-154 (192)
331 2e9q_A 11S globulin subunit be 29.4 96 0.0033 29.9 6.6 34 30-63 64-97 (459)
332 1uij_A Beta subunit of beta co 29.2 42 0.0014 32.0 4.0 53 31-88 51-103 (416)
333 3ksc_A LEGA class, prolegumin; 29.1 95 0.0033 30.3 6.5 56 30-88 359-415 (496)
334 2opk_A Hypothetical protein; p 28.7 53 0.0018 24.5 3.8 35 47-88 51-85 (112)
335 4ggd_C Mitotic checkpoint seri 28.2 6.3 0.00022 20.4 -1.1 15 208-222 10-24 (26)
336 2oa2_A BH2720 protein; 1017534 27.9 1.1E+02 0.0039 23.8 5.9 72 35-110 49-121 (148)
337 3kg8_A CURJ; polyketide syntha 27.8 1.2E+02 0.0041 27.0 6.7 50 367-416 247-297 (308)
338 4e2q_A Ureidoglycine aminohydr 27.6 1.4E+02 0.0047 26.5 6.7 70 33-113 74-143 (266)
339 3h7j_A Bacilysin biosynthesis 27.6 1.1E+02 0.0039 26.3 6.3 68 33-110 149-217 (243)
340 4axo_A EUTQ, ethanolamine util 27.3 61 0.0021 26.0 4.0 53 48-112 83-135 (151)
341 3bu7_A Gentisate 1,2-dioxygena 26.7 31 0.0011 32.7 2.5 49 32-88 126-174 (394)
342 2qnk_A 3-hydroxyanthranilate 3 25.7 1.5E+02 0.0052 26.3 6.6 70 31-113 209-278 (286)
343 2phl_A Phaseolin; plant SEED s 25.2 60 0.0021 30.7 4.2 50 31-85 54-103 (397)
344 2i45_A Hypothetical protein; n 24.8 1.2E+02 0.0042 21.8 5.2 54 50-114 49-102 (107)
345 1sef_A Conserved hypothetical 24.6 90 0.0031 27.6 5.1 69 32-110 185-255 (274)
346 3nw4_A Gentisate 1,2-dioxygena 24.5 53 0.0018 30.7 3.6 50 31-88 105-154 (368)
347 3bu7_A Gentisate 1,2-dioxygena 24.5 55 0.0019 31.0 3.7 71 33-113 298-369 (394)
348 1lr5_A Auxin binding protein 1 24.4 81 0.0028 25.1 4.4 53 33-87 45-99 (163)
349 3s7i_A Allergen ARA H 1, clone 23.3 75 0.0026 30.3 4.5 51 33-88 48-98 (418)
350 3zen_D Fatty acid synthase; tr 23.2 1.2E+02 0.0041 36.9 6.9 61 360-420 1131-1197(3089)
351 3kgl_A Cruciferin; 11S SEED gl 23.2 73 0.0025 30.8 4.4 56 30-88 324-380 (466)
352 3cew_A Uncharacterized cupin p 23.0 97 0.0033 23.2 4.4 47 33-88 30-78 (125)
353 1zvf_A 3-hydroxyanthranilate 3 22.8 67 0.0023 26.4 3.4 61 49-116 54-117 (176)
354 3ht1_A REMF protein; cupin fol 22.8 1.3E+02 0.0044 23.0 5.3 32 49-87 59-90 (145)
355 3cjx_A Protein of unknown func 22.5 1.1E+02 0.0037 24.8 4.8 69 31-112 45-117 (165)
356 4e2q_A Ureidoglycine aminohydr 22.5 1.1E+02 0.0039 27.0 5.2 48 31-87 188-236 (266)
357 1fxz_A Glycinin G1; proglycini 21.2 1.3E+02 0.0046 29.1 5.9 34 30-63 49-82 (476)
358 3qac_A 11S globulin SEED stora 20.9 92 0.0031 30.1 4.6 57 30-89 324-381 (465)
359 2phl_A Phaseolin; plant SEED s 20.6 99 0.0034 29.2 4.7 71 34-110 244-321 (397)
360 1rc6_A Hypothetical protein YL 20.5 1.4E+02 0.0047 26.1 5.4 69 33-111 63-133 (261)
361 2d40_A Z3393, putative gentisa 20.5 2.2E+02 0.0075 26.2 7.0 53 48-112 287-339 (354)
362 2d40_A Z3393, putative gentisa 20.3 64 0.0022 30.0 3.3 72 32-112 103-174 (354)
363 1rc6_A Hypothetical protein YL 20.3 1.2E+02 0.0042 26.4 5.1 48 32-88 182-230 (261)
No 1
>3rd7_A Acyl-COA thioesterase; seattle structur genomics center for infectious disease, ssgcid, hydrolase; 1.95A {Mycobacterium avium}
Probab=100.00 E-value=2.4e-61 Score=450.43 Aligned_cols=274 Identities=32% Similarity=0.537 Sum_probs=238.0
Q ss_pred ccchhhhcccCccccceeecccCCCCCCCceeehhHHHHHHHHHHhccCCCCCcceeeeeeeccCcCCCCCeEEEEEEee
Q 040957 133 CSLVENILHLEPVEVNIFQGITLPDAPKFGKVFGGQLVGQALAAASKTVDCLKIVHSLHCYFLLVGDLNIPIIYQVHRVR 212 (430)
Q Consensus 133 ~~~l~~~l~l~~~~~~~f~~~~~~~~~~~~~~~GG~~~a~al~Aa~~~~~~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr 212 (430)
+..++++|+|++++++.|++..++ .+++++|||+++|||+.||.++ ++++.|||+|+||++||+++.|++|+|+++|
T Consensus 7 ~~~l~~~l~le~i~~~~f~g~~~~--~~~~~vfGG~v~Aqal~AA~~t-~~~~~~hSlh~yFl~pg~~~~Pi~y~Ve~lR 83 (286)
T 3rd7_A 7 LEDVLSLLDLQQIDDAAFVGTQPD--TPNHHIIGSQVAAQALMAAGRT-TPGRLAHSMHMYFLRRGDARQPIQYDVTPLR 83 (286)
T ss_dssp HHHHHHHTCCEEEETTEEEECCCC--CTTCBCCHHHHHHHHHHHHHHT-STTCEEEEEEEEECSCCBTTSCEEEEEEEEE
T ss_pred HHHHHHhcceEEcCCCeEEcccCC--CCCCcccHHHHHHHHHHHHHhC-CCCCCcEEEEEEccCCCCCCCCEEEEEEEEE
Confidence 567899999999999999999876 3677999999999999999999 8899999999999999999999999999999
Q ss_pred eCCCeeEEEEEEEECCeeEEEEEEeccccCCCcccCccCCCCCCCCCCCCCHHHHHHhhcCCCCCchhhHhhhhccCCCC
Q 040957 213 DGNSFATRRVDAIQKGNIIFTLLASFQKEEQGFEHQETTMPLVPAPEMLLSMEELRERRLTDPRLPRSYRNKVASKEFVP 292 (430)
Q Consensus 213 ~Gr~~s~~~V~~~Q~g~~~~~~~~sf~~~~~~~~~~~~~~p~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (430)
+||||++|+|+++|+|+++|++++||++.+++++|+.. ||++|+||+|+..++....+.. ..+++ +. ..
T Consensus 84 dGRSfstr~V~a~Q~g~~i~~~~asF~~~e~~~~h~~~-~P~vp~Pe~~~~~~~~~~~~~~--~~~~~----~~----~~ 152 (286)
T 3rd7_A 84 DGGTISSRRVTASQSGVVLFEALASFTIIADDVDWQQR-MPDVAGPSAVHGLEDLLAPYAE--EFGDW----WP----QQ 152 (286)
T ss_dssp ECSSEEEEEEEEEETTEEEEEEEEEEECCCCCCCEECC-CCCCCCGGGSCBHHHHHGGGGG--GC--------------C
T ss_pred CCCcEEEEEEEEEECCEEEEEEEEecccCCCCccccCC-CCCCCChhhccchHHHHHhhhH--HHHHH----hc----cC
Confidence 99999999999999999999999999999999999865 9999999999988765432110 01111 10 14
Q ss_pred CCeEEEEcCCC-CCCC--CCCCCCeeEEEEecCCCCCCChHHHHHHHHHHhhhhhhhhhc--ccCccCCCcceeeeccee
Q 040957 293 WPIDIRFCEPN-SYTN--QSKSPPSLRYWFRAKGKLSDDQALHRCVVAFASDLIFSSVSL--NPHRRKGFRTASLSLDHS 367 (430)
Q Consensus 293 ~~~e~r~~~~~-~~~~--~~~~~~~~~~W~R~~~~~~~~~~~~~~~la~~sD~~~~~~~~--~~~~~~~~~~~~~sld~s 367 (430)
.++|+|++++. .+.. ....+++..+|+|.++++++|+.+|.++|||+||.+++.+++ .+|. ......++||||+
T Consensus 153 ~~~e~R~~~~~~~~~~~~~~~~~~~~~~W~R~~~~~p~d~~~~~~~Lay~sD~~~l~~~l~~~~h~-~~~~~~~aSLdhs 231 (286)
T 3rd7_A 153 RPFTMRYLDAPPRVALDLSDPPPPRLRIWLRANGEVTDDPLVNSCVVAYLSALTLLECVMTTMRTT-PVGPRLSALVDHT 231 (286)
T ss_dssp CSEEEEESSCCHHHHTTSSSCCCSEEEEEEEESSCCCSCHHHHHHHHHHHHHHSTTHHHHHHTTCB-TTBSSCEEECEEE
T ss_pred CCEEEEEcCCccCcccCCCCCCCCeeEEEEEECCCCCCchHHHHHHHHHHHhhhhHHHHHhhccCC-CcccceeeeeeEE
Confidence 57999999986 4443 122568899999999999999999999999999999999999 8886 3334678999999
Q ss_pred eeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEeccceeccCC
Q 040957 368 MWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEALLRSPK 421 (430)
Q Consensus 368 i~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~Q~~l~r~~~ 421 (430)
||||++++.++|++|+++++++++||++++|+|||+||+|||+++||||+|.++
T Consensus 232 i~Fh~~~~~d~Wll~~~~s~~a~~gr~~~~g~i~~~~G~LVAs~~Qegl~R~~~ 285 (286)
T 3rd7_A 232 IWFHRAADFTDWLLFDQFSPSIVGRRGLATGTLYNRSGELVCIATQEGYFAEQR 285 (286)
T ss_dssp EEECSCCCTTSCEEEEEEEEEEETTEEEEEEEEEETTSCEEEEEEEEEEECC--
T ss_pred EEEeCCCCCCceEEEEEEeceecCceEEEEEEEECCCCCEEEEEEehheeeccc
Confidence 999999999999999999999999999999999999999999999999999763
No 2
>3u0a_A Acyl-COA thioesterase II TESB2; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, hydrolase; 2.50A {Mycobacterium marinum}
Probab=100.00 E-value=1.7e-60 Score=444.47 Aligned_cols=276 Identities=38% Similarity=0.664 Sum_probs=232.9
Q ss_pred cccchhhhcccCccccceeecccCCCCC-CCceeehhHHHHHHHHHHhccCCCCCcceeeeeeeccCcCCCCCeEEEEEE
Q 040957 132 TCSLVENILHLEPVEVNIFQGITLPDAP-KFGKVFGGQLVGQALAAASKTVDCLKIVHSLHCYFLLVGDLNIPIIYQVHR 210 (430)
Q Consensus 132 ~~~~l~~~l~l~~~~~~~f~~~~~~~~~-~~~~~~GG~~~a~al~Aa~~~~~~~~~~~s~~~~Fl~~~~~~~pi~~~V~~ 210 (430)
.++ |+++|+|++++++.|++..++.|+ +++++|||+++|||+.||.+++++++.+||+|+||++|++++.|++|+|++
T Consensus 4 ~~~-l~~~l~le~~~~~~f~g~~~~~~~~~~~~~fGG~v~aqal~AA~~tv~~~~~~hSlh~~Fl~pg~~~~pi~~~Ve~ 82 (285)
T 3u0a_A 4 SMA-IEEILDLEQLEVNIYRGSVFSPESGFLQRTFGGHVAGQSLVSAVRTVDPRYQVHSLHGYFLRSGDAQEPTVFLVER 82 (285)
T ss_dssp --C-GGGGGCCEEEETTEEEECC-------CHHHHHHHHHHHHHHHHHHTSCTTSEEEEEEEEECCCCCTTSCEEEEEEE
T ss_pred ccc-hHHhcCeEECCCCeEEccCCcccccCCCcccHHHHHHHHHHHHHHhCCCCCceEEEEEEecCCCCCCCCEEEEEEE
Confidence 345 899999999999999999998876 677999999999999999999999999999999999999998899999999
Q ss_pred eeeCCCeeEEEEEEEECCeeEEEEEEeccccCCCcccCccCCCCCCCCCCCCCHHHHHHhhcCCCCCchhhHhhhhccCC
Q 040957 211 VRDGNSFATRRVDAIQKGNIIFTLLASFQKEEQGFEHQETTMPLVPAPEMLLSMEELRERRLTDPRLPRSYRNKVASKEF 290 (430)
Q Consensus 211 lr~Gr~~s~~~V~~~Q~g~~~~~~~~sf~~~~~~~~~~~~~~p~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (430)
+|+||||++|+|+++|+|++++++++||++.+++++|+.. ||++|+||+|+..++..... +.... .
T Consensus 83 lRdGRsfs~r~V~a~Q~g~~i~~~~asf~~~~~~~~h~~~-~P~vp~Pe~~~~~~~~~~~~------~~~~~------~- 148 (285)
T 3u0a_A 83 TRDGGSFVTRRVNAVQHGEVIFSMGASFQTAQNGISHQDA-MPAAPPPDDLPGLRSVRVFD------DAGFR------Q- 148 (285)
T ss_dssp EEECSSEEEEEEEEEETTEEEEEEEEEEECSCCBCCEECC-CCCCCCGGGCCC------------------C------T-
T ss_pred EeCCCcEEEEEEEEEECCEEEEEEEEEcCCCCCCccccCC-CCCCCCchhcCChhHhhhhh------hhhcc------c-
Confidence 9999999999999999999999999999999989988755 89999999998876532111 00000 0
Q ss_pred CCCCeEEEEcCCCCCCCCCCCCCeeEEEEecCCCCCCChHHHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeec
Q 040957 291 VPWPIDIRFCEPNSYTNQSKSPPSLRYWFRAKGKLSDDQALHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWF 370 (430)
Q Consensus 291 ~~~~~e~r~~~~~~~~~~~~~~~~~~~W~R~~~~~~~~~~~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f 370 (430)
...+|+|++++..+...+..+++..+|+|.++++++|+.+|.++|||+||++++.+++.+|........++||||+|||
T Consensus 149 -~~~~e~R~~~~~~~~~~~~~~~~~~~W~R~~~~l~~d~~~~~~~Lay~sD~~~l~~~~~~~~~~~~~~~~aSLdhti~f 227 (285)
T 3u0a_A 149 -FEEWDVRIVPRDLLAPLPGKASQQQVWFRHRDPLPDDPVLHICALAYMSDLTLLGSAQVTHLAEREHLQVASLDHAMWF 227 (285)
T ss_dssp -TTTEEEEECCGGGCCCCTTCSCEEEEEEEESSCCCSCHHHHHHHHHHHHHHHGGGGGGTTCTTTGGGCEEEECEEEEEE
T ss_pred -ceeEEEEEcCcccccCCCCCCCEEEEEEEECCCCCCChHHHHHHHHHHHHHhhHHHHHHhcccCcccceeeeeeEEEEE
Confidence 1148999998765443344577899999999999999999999999999999899999998654333578999999999
Q ss_pred cCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEeccceeccCCCC
Q 040957 371 HRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEALLRSPKPK 423 (430)
Q Consensus 371 ~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~Q~~l~r~~~~~ 423 (430)
|++++.++|++|+++++++++||++++++|||+||+|||+++||||+|+++.+
T Consensus 228 hr~~~~d~Wll~~~~s~~a~~Grgl~~g~i~~~~G~LVAs~~QeglvR~~~~~ 280 (285)
T 3u0a_A 228 MRGFRADEWLLYDQSSPSAGGGRALTHGKIFTQGGELVAAVMQEGLTRYPSGY 280 (285)
T ss_dssp CSCCCTTSCEEEEEEEEEEETTEEEEEEEEEETTCCEEEEEEEEEEEECCSCC
T ss_pred cCCCCCCceEEEEEEeceecCCeEEEEEEEECCCCCEEEEEEeeEEEEeccCC
Confidence 99999999999999999999999999999999999999999999999997643
No 3
>1c8u_A Acyl-COA thioesterase II; internal repeats, hydrolase; HET: LDA; 1.90A {Escherichia coli} SCOP: d.38.1.3 d.38.1.3
Probab=100.00 E-value=1.2e-57 Score=427.06 Aligned_cols=279 Identities=42% Similarity=0.693 Sum_probs=242.7
Q ss_pred ccchhhhcccCccccceeecccCCCCCCCceeehhHHHHHHHHHHhccCCCCCcceeeeeeeccCcCCCCCeEEEEEEee
Q 040957 133 CSLVENILHLEPVEVNIFQGITLPDAPKFGKVFGGQLVGQALAAASKTVDCLKIVHSLHCYFLLVGDLNIPIIYQVHRVR 212 (430)
Q Consensus 133 ~~~l~~~l~l~~~~~~~f~~~~~~~~~~~~~~~GG~~~a~al~Aa~~~~~~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr 212 (430)
+..|+++++|++++++.|++...+. +++.+|||+++||++.||.+++++++.+||+|+||++|++++.|++|+|+++|
T Consensus 4 ~~~l~~~l~l~~~~~~~f~g~~~~~--~~~~~fGG~v~aqal~AA~~tv~~~~~~~Slh~~Fl~pg~~~~pi~~~Ve~lR 81 (285)
T 1c8u_A 4 LKNLLTLLNLEKIEEGLFRGQSEDL--GLRQVFGGQVVGQALYAAKETVPEERLVHSFHSYFLRPGDSKKPIIYDVETLR 81 (285)
T ss_dssp HHHHHHHHSCEEEETTEEEECCCCS--SCSBCCHHHHHHHHHHHHHHTSCTTCEEEEEEEEECSCCBTTSCEEEEEEEEE
T ss_pred HHHHHhhcCcEEcCCCeEECccCCC--CCCcccchHHHHHHHHHHHHhCCCCCceEEEEEEccCCCCCCCCEEEEEEEEe
Confidence 4578999999999999999998763 46799999999999999999999899999999999999999889999999999
Q ss_pred eCCCeeEEEEEEEECCeeEEEEEEeccccCCCcccCccCCCCCCCCCCCCCHHHHHHhhcCCCCCchhhHhhhhccCCCC
Q 040957 213 DGNSFATRRVDAIQKGNIIFTLLASFQKEEQGFEHQETTMPLVPAPEMLLSMEELRERRLTDPRLPRSYRNKVASKEFVP 292 (430)
Q Consensus 213 ~Gr~~s~~~V~~~Q~g~~~~~~~~sf~~~~~~~~~~~~~~p~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (430)
+||||++|+|+++|+|++++++++||+..+++++|+. ++|++|+||+|+..++....+. ...|...+..+. ..
T Consensus 82 dGrs~s~r~V~a~Q~g~~i~~~~asf~~~~~g~~~~~-~~P~~p~Pe~~~~~~~~~~~~~--~~~p~~~~~~~~----~~ 154 (285)
T 1c8u_A 82 DGNSFSARRVAAIQNGKPIFYMTASFQAPEAGFEHQK-TMPSAPAPDGLPSETQIAQSLA--HLLPPVLKDKFI----CD 154 (285)
T ss_dssp ECSSEEEEEEEEEETTEEEEEEEEEEECCCCCCCEEC-CCCCCCCSTTCCCHHHHHHHHT--CCSCHHHHTTSC----SC
T ss_pred cCCcEEEEEEEEEECCEEEEEEEEEcCCCCCCccccC-CCCCCCCcccccCHHHHHHhhh--hhCcHHHHHhhc----cC
Confidence 9999999999999999999999999999988988884 4899999999998876543322 135554433221 12
Q ss_pred CCeEEEEcCCCCCCCCCCCCCeeEEEEecCCCCCCChHHHHHHHHHHhhhhhhhhhcccCccC--CCcceeeecceeeec
Q 040957 293 WPIDIRFCEPNSYTNQSKSPPSLRYWFRAKGKLSDDQALHRCVVAFASDLIFSSVSLNPHRRK--GFRTASLSLDHSMWF 370 (430)
Q Consensus 293 ~~~e~r~~~~~~~~~~~~~~~~~~~W~R~~~~~~~~~~~~~~~la~~sD~~~~~~~~~~~~~~--~~~~~~~sld~si~f 370 (430)
.++|+|++.+..++.....+++..+|+|.++++++++.+|.++|+|+||+.++++++.+|+.. .....++||||+|||
T Consensus 155 ~~~e~R~~~~~~~~~~~~~~~~~~~W~R~~~~~~~d~~~~~~~Lay~sD~~~l~~~~~~~g~~~~~~~~~~asldhti~f 234 (285)
T 1c8u_A 155 RPLEVRPVEFHNPLKGHVAEPHRQVWIRANGSVPDDLRVHQYLLGYASDLNFLPVALQPHGIGFLEPGIQIATIDHSMWF 234 (285)
T ss_dssp CSEEEEESSCCCTTTCCCCCSEEEEEEEESSCCCSCHHHHHHHHHHHTTSSSGGGGGGGGTCCTTSTTEEEEEEEEEEEE
T ss_pred CCeEEEEeCCCCcccCCCCCceEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHhccCcccCCCcceeecceeEEE
Confidence 579999998776554334467889999999999999999999999999998888999998543 233578999999999
Q ss_pred cCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEeccceeccC
Q 040957 371 HRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEALLRSP 420 (430)
Q Consensus 371 ~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~Q~~l~r~~ 420 (430)
|++++.++|++++++++++++||++++++|||++|+|||++.||||+|++
T Consensus 235 hr~~~~~~Wll~~~~s~~a~~Grg~~~g~i~d~~G~LVAs~~Qeglvr~~ 284 (285)
T 1c8u_A 235 HRPFNLNEWLLYSVESTSASSARGFVRGEFYTQDGVLVASTVQEGVMRNH 284 (285)
T ss_dssp CSCCCTTSCEEEEEEEEEEETTEEEEEEEEEETTCCEEEEEEEEEEEEEC
T ss_pred CCCCCCCceEEEEEECccccCceEEEEEEEECCCCCEEEEEEEeEEEEcC
Confidence 99999999999999999999999999999999999999999999999975
No 4
>3rqb_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta sandwich; HET: MSE; 2.80A {Alicyclobacillus acidocaldarius subsp}
Probab=100.00 E-value=4.9e-49 Score=366.15 Aligned_cols=258 Identities=19% Similarity=0.204 Sum_probs=219.8
Q ss_pred ccchhhhcccCccccceeecccCCCCCCCceeehhHHHHHHHHHHhccCCCCCcceeeeeeeccCcCCCCCeEEEEEEee
Q 040957 133 CSLVENILHLEPVEVNIFQGITLPDAPKFGKVFGGQLVGQALAAASKTVDCLKIVHSLHCYFLLVGDLNIPIIYQVHRVR 212 (430)
Q Consensus 133 ~~~l~~~l~l~~~~~~~f~~~~~~~~~~~~~~~GG~~~a~al~Aa~~~~~~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr 212 (430)
...|+++++|+++ ++.|++...+.|+++.++|||+++||++.||.++++..+.++|+|++|++|+++ +|++|+|+++|
T Consensus 9 ~~~~~~~l~l~~~-~~~~~g~~~~~~~~~~~~~GG~~~a~~~~Aa~~~~~~~~~~~sl~~~fl~~~~~-~p~~~~v~~~R 86 (275)
T 3rqb_A 9 THAFDDATALSFD-GRQFHGQVKAEYYNMVGPFGGITAATMLKAAMSHPERLGQPLALTVNFAAPAKV-APFVIEAVPVR 86 (275)
T ss_dssp CCHHHHHSCCEEC-SSSEEEECCGGGBCSSSBCHHHHHHHHHHHHHHSTTCCSEEEEEEEEESSCCCS-SEEEEEEEEEE
T ss_pred CCCHHHHhCCEEc-CCEEEEecCchhccCCCCcHHHHHHHHHHHHHhccccCCCeEEEEEEeeCCCCC-CCEEEEEEEEE
Confidence 4678999999999 999999998888778899999999999999999998788999999999999998 69999999999
Q ss_pred eCCCeeEEEEEEEECCeeEEEEEEeccccCCCcccCccCCCCCCCCCCCCCHHHHHHhhcCCCCCchhhHhhhhccCCCC
Q 040957 213 DGNSFATRRVDAIQKGNIIFTLLASFQKEEQGFEHQETTMPLVPAPEMLLSMEELRERRLTDPRLPRSYRNKVASKEFVP 292 (430)
Q Consensus 213 ~Gr~~s~~~V~~~Q~g~~~~~~~~sf~~~~~~~~~~~~~~p~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (430)
+||++++++|+++|+|+++++++++|+..+++++|+..+||++|+||+|+..++ +..+.+ .
T Consensus 87 ~Grs~~~~~v~~~Q~g~~~~~~~~~f~~~e~g~~h~~~~mP~vP~Pe~l~~~~~--------~~~~~~-----------~ 147 (275)
T 3rqb_A 87 TNRSTQHFTLTMMQDGEVVTTATAVFGIRRESWSHTEAVMPDVPPPADVPRFVA--------PAPLPW-----------M 147 (275)
T ss_dssp ECSSEEEEEEEEEETTEEEEEEEEEEECCCCCCCEECSCCCCCCCGGGSCBCCC--------SSCCGG-----------G
T ss_pred cCCCEEEEEEEEEECCEEEEEEEEEECCCCCCccccCCCCCCCCChHHCccccc--------cccccc-----------c
Confidence 999999999999999999999999999998898887556899999999976532 111211 2
Q ss_pred CCeEEEEcCCCCCCCCCCCCCeeEEEEecCCCCCCChHHHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccC
Q 040957 293 WPIDIRFCEPNSYTNQSKSPPSLRYWFRAKGKLSDDQALHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHR 372 (430)
Q Consensus 293 ~~~e~r~~~~~~~~~~~~~~~~~~~W~R~~~~~~~~~~~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~ 372 (430)
.++|+|++.+..++. ..+++..+|+|.+++.+. +.++|+|+||.+.... +... ....+++|||||||||+
T Consensus 148 ~~~e~R~v~~~~~~~--~~~~~~~~W~R~~~~~~~----~~~~La~~sD~~~p~~-~~~~---~~~~~~~sld~ti~fh~ 217 (275)
T 3rqb_A 148 QWYHVRLIRGSAFDE--VQDATTYQWMRDDPPRPL----DHAALAALCDTFVPRV-YVKL---KRPVPIGTVTFTVYFLA 217 (275)
T ss_dssp GGEEEEEEECCTTSC--CSSSCEEEEEEESSCCCC----CHHHHHHHTTCSCCHH-HHHH---TSCCCEEEEEEEEEECS
T ss_pred CCceEEEECCCCCCC--CCCCceeEEEecCCCCCC----CHHHHHHHHHcccHHH-HHhc---CCCCccceEEEEEEEec
Confidence 358999998765443 456789999999976553 5678999999764322 2211 23356889999999999
Q ss_pred CCC-----CCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEeccceeccCC
Q 040957 373 SFR-----ADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEALLRSPK 421 (430)
Q Consensus 373 ~~~-----~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~Q~~l~r~~~ 421 (430)
+.+ .++|++++++++++++||++++++|||++|+|||+++|++++|.++
T Consensus 218 ~~~~~~~~~~~Wll~~~~s~~~~~Gr~~~~~~l~d~~G~LvA~s~Q~~~vr~p~ 271 (275)
T 3rqb_A 218 DPETIFRQGTNELLGVARATGFSHGYFDQIGEVWSQDGDLLATTTQLVYMKAPV 271 (275)
T ss_dssp CHHHHHHTTTCCEEEEEECSEEETTEEEEEEEEECTTSCEEEEEEEEEEECCCC
T ss_pred ChhhcccCCCccEEEEEEchhhcCCceeeeEEEECCCCCEEEEEEEEEEEeCCC
Confidence 654 6999999999999999999999999999999999999999999654
No 5
>3cjy_A Putative thioesterase; YP_496845.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE PGE; 1.70A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=4.8e-47 Score=349.89 Aligned_cols=250 Identities=22% Similarity=0.254 Sum_probs=203.9
Q ss_pred hhcccCccccceeecccCCCCCCCc----eeehhHHHHHHHHHHhccCCCCCcceeeeeeeccCcCCCCCeEEEEEEeee
Q 040957 138 NILHLEPVEVNIFQGITLPDAPKFG----KVFGGQLVGQALAAASKTVDCLKIVHSLHCYFLLVGDLNIPIIYQVHRVRD 213 (430)
Q Consensus 138 ~~l~l~~~~~~~f~~~~~~~~~~~~----~~~GG~~~a~al~Aa~~~~~~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~ 213 (430)
..++++++++++|.+...+.+..+. .+|||+++||++.||.++++ +.+||+|+||++|++++.|++|+|+++|+
T Consensus 5 a~~~v~~~~~~~f~~~~~~~~~~G~~~~~~~~GG~~~a~~~~Aa~~~~~--~~~~sl~~~fl~p~~~~~p~~~~v~~~r~ 82 (259)
T 3cjy_A 5 AFPALVRQDDARYAITVGPDLAVGPPGHAYLFGGASMALALDVAAETVG--RPVVQGSLQFVSFTPLGSVLDLTVEVLQS 82 (259)
T ss_dssp CCTTCEEEETTEEEEECCGGGEECSTTCCEECHHHHHHHHHHHHHHHHT--SCEEEEEEEECSCCBTTCEEEEEEEEEEE
T ss_pred hhhheEEcCCCeEEEecCcccccCCCCCcccchhHHHHHHHHHHHHhcC--CCcEEEEEEccCCcCCCCCEEEEEEEEEc
Confidence 3446888999999999876555332 48999999999999999994 67999999999999997799999999999
Q ss_pred CCCeeEEEEEEEECCeeEEEEEEeccccCCCcccCccCCCCCCCCCCCCCHHHHHHhhcCCCCCchhhHhhhhccCCCCC
Q 040957 214 GNSFATRRVDAIQKGNIIFTLLASFQKEEQGFEHQETTMPLVPAPEMLLSMEELRERRLTDPRLPRSYRNKVASKEFVPW 293 (430)
Q Consensus 214 Gr~~s~~~V~~~Q~g~~~~~~~~sf~~~~~~~~~~~~~~p~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (430)
||++++++|+++|+|+++++++++|+..+++.+++..++|++|+||+|++.++... ...+..+ ..
T Consensus 83 Grs~~~~~v~~~q~g~~~~~a~asf~~~~~~~~~~~~~~P~~p~Pe~~~~~~~~~~-----~~~~~~~----------~~ 147 (259)
T 3cjy_A 83 GRTLAQARVAGTVDGRLVFHSGISLGMREGFSARQWALAPPVPQPDNCPPCTTLPA-----QDDNARY----------LE 147 (259)
T ss_dssp CSSCEEEEEEEEETTEEEEEEEEEECCCTTCCCCCCCCCCCCCCGGGSCBCCCCCC-----CCTTCCT----------GG
T ss_pred CCCEEEEEEEEEECCEEEEEEEEEcccCCCCccccccCCCCCcChhHCcChhhhhh-----ccCcHHh----------cC
Confidence 99999999999999999999999999988888888556899999999976543100 0111111 13
Q ss_pred CeEEEEcCCCCCCCCCCCCCeeEEEEecCCCCCCChHHHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccCC
Q 040957 294 PIDIRFCEPNSYTNQSKSPPSLRYWFRAKGKLSDDQALHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRS 373 (430)
Q Consensus 294 ~~e~r~~~~~~~~~~~~~~~~~~~W~R~~~~~~~~~~~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~ 373 (430)
++|+|.+.+. ...+++..+|+|.+++.+.+. +.|+|+||++. ..+.++. +...+++||||+||||++
T Consensus 148 ~~e~R~~~~~-----~~~~~~~~~W~R~~~~~~~d~----~~la~~sD~~~--~~~~~~~--~~~~~~~sld~ti~fhr~ 214 (259)
T 3cjy_A 148 GIEVREAGGP-----EVPSGRTRLWLRRKDGAPLDA----ASLAMFADFLP--IALGRAT--GCSGGGNSLDNSLRITGA 214 (259)
T ss_dssp GEEEEECSCT-----TCCTTEEEEEEEETTCCCBCH----HHHHHHHTTHH--HHHHHHH--TCCC--EESEEEEEESCC
T ss_pred ceEEEECCCC-----CCCCCEEEEEEEcCCCCCCCH----HHHHHHhcCch--hhhhhhc--CCCcceeeeeeeeeeccC
Confidence 6899987543 335678899999998777654 67999999872 2222221 124578999999999995
Q ss_pred CCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEeccceec
Q 040957 374 FRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEALLR 418 (430)
Q Consensus 374 ~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~Q~~l~r 418 (430)
+.++|++++++++++++||++.+++|||++|+|||+++|++++|
T Consensus 215 -~~~~Wll~~~~s~~a~~Gr~~~~~~i~d~~G~lvAs~~Q~~lvr 258 (259)
T 3cjy_A 215 -AAPGWCLCDMIIPSSASGFAQGQVTLWDQSGRLLATGAQSLLLK 258 (259)
T ss_dssp -BCSSCEEEEEEEEEEETTEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred -CCCCcEEEEEECcccCCCeEEEEEEEECCCCCEEEEEEEEEEEe
Confidence 69999999999999999999999999999999999999999997
No 6
>3bbj_A Putative thioesterase II; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.16A {Thermobifida fusca}
Probab=100.00 E-value=1.8e-44 Score=335.50 Aligned_cols=261 Identities=13% Similarity=0.067 Sum_probs=207.5
Q ss_pred cchhhhcccCccccceeecccCCCCCCCceeehhHHHHHHHHHHhccCCCCCcceeeeeeeccCcCCCCCeEEEEEEeee
Q 040957 134 SLVENILHLEPVEVNIFQGITLPDAPKFGKVFGGQLVGQALAAASKTVDCLKIVHSLHCYFLLVGDLNIPIIYQVHRVRD 213 (430)
Q Consensus 134 ~~l~~~l~l~~~~~~~f~~~~~~~~~~~~~~~GG~~~a~al~Aa~~~~~~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~ 213 (430)
..|.+++.+++++++.|++.....|..++.+|||+++||++.||.+++++ ..++|+|++|++|++++ |++|+|+++|+
T Consensus 6 ~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~hGG~~~al~~~A~~~~~~~-~~~~sl~~~fl~p~~~g-~i~~~~~~~r~ 83 (272)
T 3bbj_A 6 TRFDSATEVVRVGENRYAVELDPGYLIGTAMNGGYLMTVLQRSALAESDH-LHAVSSSYHFHRPASSG-PAEIETRVLKR 83 (272)
T ss_dssp CHHHHHTCEEEEETTEEEEEECGGGBSSSSBCHHHHHHHHHHHHHHTCSS-SEEEEEEEEECSCCCSE-EEEEEEEEEEC
T ss_pred chHHHHhCcEEccCCEEEEEeCccccCCCCccHHHHHHHHHHHHHHhcCC-CCEEEEEEEEeCCCCCc-cEEEEEEEEEc
Confidence 46888999999999999999886665667999999999999999999975 56799999999999986 99999999999
Q ss_pred CCCeeEEEEEEEECCeeEEEEEEeccccC--CCcccCccCCCCCCCCCCCCCHHHHHHhhcCCCCCchhhHhhhhccCCC
Q 040957 214 GNSFATRRVDAIQKGNIIFTLLASFQKEE--QGFEHQETTMPLVPAPEMLLSMEELRERRLTDPRLPRSYRNKVASKEFV 291 (430)
Q Consensus 214 Gr~~s~~~V~~~Q~g~~~~~~~~sf~~~~--~~~~~~~~~~p~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (430)
||++++++|+++|+|+++++++++|...+ .+..++ .++|++|+||+|++.++. ...+. ....
T Consensus 84 Gr~~~~~~v~~~q~g~~v~~a~a~f~~~~~~~g~~~~-~~~P~vp~Pe~~~~~~~~-------~~~~~-~~~~------- 147 (272)
T 3bbj_A 84 GRTVTTVQTTLFQEGRTILTGTLATATLDPHAEPRYA-APQPAIPPQHQCRRVDPR-------QSHLP-DDGF------- 147 (272)
T ss_dssp CSSCEEEEEEEEETTEEEEEEEEEEECCCTTCCCSEE-CCCCCCCCGGGSEECCCC-------CCSSG-GGCG-------
T ss_pred CCCEEEEEEEEEECCEEEEEEEEEEEecCCCCCcccc-CCCCCCcChHHCcccccc-------ccccc-ccch-------
Confidence 99999999999999999999999999875 565554 458999999998764321 00111 0000
Q ss_pred CCCeEEEEcCCC-CCCC-C-CCCCCeeEEEEecCCCCCCChHHHHHHHH-HHhhhhhhhhhcccCccCCCcceeeeccee
Q 040957 292 PWPIDIRFCEPN-SYTN-Q-SKSPPSLRYWFRAKGKLSDDQALHRCVVA-FASDLIFSSVSLNPHRRKGFRTASLSLDHS 367 (430)
Q Consensus 292 ~~~~e~r~~~~~-~~~~-~-~~~~~~~~~W~R~~~~~~~~~~~~~~~la-~~sD~~~~~~~~~~~~~~~~~~~~~sld~s 367 (430)
..++|+|++.+. .++. . ..++++..+|+|.+. ++++..++.++++ |+||++.. +..+++. ..+.+|+||+
T Consensus 148 ~~~~e~R~~~~~~~~~~~~~~~~~~~~~~W~R~~~-l~~~~~~~~~~l~a~~sD~~~~--~~~~~~~---~~~~p~ldlt 221 (272)
T 3bbj_A 148 LARVDVDFSPDSYAALARERTVTTPELCGYVDLSA-RDGGSAKDPLAFLPLAVDALPP--IVSLLVD---WSWAPTVELT 221 (272)
T ss_dssp GGTEEEEECHHHHHHHTTCSCCSSCEEEEEEEECT-TTTSSCSSHHHHHHHHTTCSCC--GGGGTSS---CSCCCEEEEE
T ss_pred hccEEEEECCccccccccCCCCCCcEEeEEEeecc-cCCCCCCCHHHHHHHhhhcCcc--ceeccCC---CCccceEEEE
Confidence 146999997654 2222 1 245677889999997 6654434455555 99998743 3334422 1235699999
Q ss_pred eeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEeccceecc
Q 040957 368 MWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEALLRS 419 (430)
Q Consensus 368 i~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~Q~~l~r~ 419 (430)
+|||++ +.++|++|+++++++++||++.+++|||++|+|||+++|+||+|.
T Consensus 222 ~~fhr~-~~~~Wll~~~~s~~a~~Grg~~~~~i~d~~G~LvA~~~Qe~lvr~ 272 (272)
T 3bbj_A 222 WHLRAI-PEPGPLAFRSTCALVSDGWFDENVDLWDARGRLVAQSRQLARVGR 272 (272)
T ss_dssp EEECSC-CCSSCEEEEEECSEEETTEEEEEEEEECTTSCEEEEEEEEEETTC
T ss_pred EEEEcc-CCCCeEEEEEEEEEecCCcEeeeEEEECCCCCEEEEEeeeeeccC
Confidence 999995 489999999999999999999999999999999999999999973
No 7
>1tbu_A Peroxisomal acyl-coenzyme A thioester hydrolase 1; yeast peroxisomal thioesterase, , domain swapping, iodine SOAK, siras; 2.20A {Saccharomyces cerevisiae} SCOP: d.38.1.3
Probab=99.96 E-value=1.4e-29 Score=200.73 Aligned_cols=109 Identities=38% Similarity=0.543 Sum_probs=92.9
Q ss_pred ccchhhhcccCccccceeecccCCCCC-CCceeehhHHHHHHHHHHhccCCCCCcceeeeeeeccCcCCCCCeEEEEEEe
Q 040957 133 CSLVENILHLEPVEVNIFQGITLPDAP-KFGKVFGGQLVGQALAAASKTVDCLKIVHSLHCYFLLVGDLNIPIIYQVHRV 211 (430)
Q Consensus 133 ~~~l~~~l~l~~~~~~~f~~~~~~~~~-~~~~~~GG~~~a~al~Aa~~~~~~~~~~~s~~~~Fl~~~~~~~pi~~~V~~l 211 (430)
+..++++++|++++++.|++...++.+ +++.+|||+++|||+.||.+++++++.+||+|+||++|++++.|++|+|+++
T Consensus 8 ~~~l~~~l~le~~~~~~f~g~~~~~~~~~~~~vfGG~v~aqal~AA~~tv~~~~~~hSlh~~Fl~pg~~~~Pi~~~Ve~l 87 (118)
T 1tbu_A 8 MSNLEKILELVPLSPTSFVTKYLPAAPVGSKGTFGGTLVSQSLLASLHTVPLNFFPTSLHSYFIKGGDPRTKITYHVQNL 87 (118)
T ss_dssp -----CCSCEEECSSSEEEESSCC--------CCHHHHHHHHHHHHHTTSCTTCEEEEEEEEECSCCCTTSCCEEEEEEE
T ss_pred HHHHHhhcceEEcCCCeEEccCCCcCCCCCcccchHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCCCCEEEEEEEE
Confidence 457889999999999999999654322 5679999999999999999999989999999999999999988999999999
Q ss_pred eeCCCeeEEEEEEEECCeeEEEEEEecccc
Q 040957 212 RDGNSFATRRVDAIQKGNIIFTLLASFQKE 241 (430)
Q Consensus 212 r~Gr~~s~~~V~~~Q~g~~~~~~~~sf~~~ 241 (430)
|+||||++|+|+++|+|++++++++||+..
T Consensus 88 RdGrsfstr~V~a~Q~g~~i~~~~~SF~~~ 117 (118)
T 1tbu_A 88 RNGRNFIHKQVSAYQHDKLIFTSMILFAVQ 117 (118)
T ss_dssp EECSSEEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred ECCCcEEEEEEEEEECCEEEEEEEEEeccC
Confidence 999999999999999999999999999863
No 8
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=99.71 E-value=5.4e-17 Score=136.91 Aligned_cols=114 Identities=13% Similarity=0.136 Sum_probs=102.2
Q ss_pred hHHHHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccC
Q 040957 4 DEVIEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRY 83 (430)
Q Consensus 4 ~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G 83 (430)
+++.++|+++++|..++++++..++..++.+.|++|++|+++|+.++++|||++|.++++ ..+.+|++ .++..+.+|
T Consensus 8 ~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~~~g~~-~~~~~~~~G 84 (154)
T 2z69_A 8 RVHQQLLQSHHLFEPLSPVQLQELLASSDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIY--RLTPEGQE-KILEVTNER 84 (154)
T ss_dssp HHHHHHHTTSTTTTTSCHHHHHHHHHTCEEEEECTTCEEECTTSBCCEEEEEEESCEEEE--CCCC------CCEEECTT
T ss_pred hhHHHHhhcChhhcCCCHHHHHHHHhhCcEEEecCCCEEecCCCccceEEEEEeCEEEEE--EECCCCCE-EEEEEccCC
Confidence 467889999999999999999999999999999999999999999999999999999999 77777777 899999999
Q ss_pred CeeccC--CCCCc-ceeeEEEecceEEEEecccccccccc
Q 040957 84 DYFGHG--SPTIF-RQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 84 ~~fGe~--~~~~~-~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
++||+. +.+.+ +.++++|.++|+++.|+++.|..+..
T Consensus 85 ~~~G~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~ 124 (154)
T 2z69_A 85 NTFAEAMMFMDTPNYVATAQAVVPSQLFRFSNKAYLRQLQ 124 (154)
T ss_dssp EEESGGGGGSSCSBCSSEEEESSSEEEEEEEHHHHHHHHT
T ss_pred CeeccHhhccCCCCCceEEEEccceEEEEECHHHHHHHHH
Confidence 999999 67777 99999999999999999999877655
No 9
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=99.70 E-value=4.8e-17 Score=136.38 Aligned_cols=112 Identities=19% Similarity=0.217 Sum_probs=104.1
Q ss_pred HHHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCe
Q 040957 6 VIEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDY 85 (430)
Q Consensus 6 ~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~ 85 (430)
+.++++++++|..++++++..++..++.+.|++|++|+++|++++++|+|++|.++++ ..+.+|++ .++..+.+|++
T Consensus 3 m~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~~~g~~-~~~~~~~~g~~ 79 (149)
T 2pqq_A 3 MDDVLRRNPLFAALDDEQSAELRASMSEVTLARGDTLFHEGDPGDRLYVVTEGKVKLH--RTSPDGRE-NMLAVVGPSEL 79 (149)
T ss_dssp GGGGGTSSTTTTTCCHHHHHHHHHHCEEEEECTTCEEECTTSEECEEEEEEESCEEEE--EECTTSSE-EEEEEECTTCE
T ss_pred hHHHhhhChhhhcCCHHHHHHHHHhceEEEeCCCCEEECCCCCCCeEEEEEecEEEEE--EECCCCcE-EEEEEcCCcCE
Confidence 3578999999999999999999999999999999999999999999999999999999 76667777 89999999999
Q ss_pred eccC--CCCCcceeeEEEecceEEEEecccccccccc
Q 040957 86 FGHG--SPTIFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 86 fGe~--~~~~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
||+. +.+.++.++++|.++|+++.|+++.|..+..
T Consensus 80 ~G~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~ 116 (149)
T 2pqq_A 80 IGELSLFDPGPRTATGTALTEVKLLALGHGDLQPWLN 116 (149)
T ss_dssp ESGGGGTSCEECSSEEEESSCEEEEEEEGGGHHHHHH
T ss_pred echHHhcCCCCcceEEEEccceEEEEEeHHHHHHHHH
Confidence 9999 6778999999999999999999999877755
No 10
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=99.70 E-value=2.1e-17 Score=137.49 Aligned_cols=111 Identities=15% Similarity=0.154 Sum_probs=97.6
Q ss_pred HHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcc---eEEeccC
Q 040957 7 IEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRP---EFQLKRY 83 (430)
Q Consensus 7 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~---~~~~~~G 83 (430)
.++|+++++|..++++++..++..++.+.|++|++|+++|+.++++|+|++|.++++ ..+.+|++ .+ +..+.+|
T Consensus 5 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~~~g~~-~~~~~~~~~~~G 81 (142)
T 3mdp_A 5 PERLRVYRFFASLTDEQLKDIALISEEKSFPTGSVIFKENSKADNLMLLLEGGVELF--YSNGGAGS-AANSTVCSVVPG 81 (142)
T ss_dssp TTGGGGSHHHHTSCHHHHHHHHHTEEEEEECTTCEEECTTSBCCEEEEEEESCEEEE--CC----------CEEEEECTT
T ss_pred HHHHhhCchhccCCHHHHHHHHHhhcEEecCCCCEEEeCCCCCCcEEEEEeCEEEEE--EECCCCCc-eEeeeEEEecCC
Confidence 468899999999999999999999999999999999999999999999999999999 77777776 77 9999999
Q ss_pred CeeccC--CCCCcceeeEEEecceEEEEecccccccccc
Q 040957 84 DYFGHG--SPTIFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 84 ~~fGe~--~~~~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
++||+. +.+.++.++++|.++|+++.|+++.|..+..
T Consensus 82 ~~fG~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~ 120 (142)
T 3mdp_A 82 AIFGVSSLIKPYHYTSSARATKPVRVVDINGARLREMSE 120 (142)
T ss_dssp CEECGGGSSTTCBCSSEEEESSCEEEEEEEHHHHHHHHH
T ss_pred CEechHHHcCCCCceEEEEECCcEEEEEEeHHHHHHHHH
Confidence 999999 7888999999999999999999999877755
No 11
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=99.70 E-value=3.2e-17 Score=139.74 Aligned_cols=113 Identities=18% Similarity=0.156 Sum_probs=104.8
Q ss_pred hHHHHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccC
Q 040957 4 DEVIEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRY 83 (430)
Q Consensus 4 ~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G 83 (430)
+.+.++|+++++|..|+++++..|+..++.+.|++|++|+++|+.++++|||++|.|+++ . ..+|++ .++..+.+|
T Consensus 34 ~~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~--~-~~~g~~-~~~~~~~~G 109 (161)
T 3idb_B 34 NRLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVIDRGTFDIY--V-KCDGVG-RCVGNYDNR 109 (161)
T ss_dssp HHHHHHHTTCHHHHTSCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESEEEEE--E-EETTEE-EEEEEEESC
T ss_pred HHHHHHHhCCHhhhcCCHHHHHHHHHhcceeEeCCCCEEEeCCCCCcEEEEEEeCEEEEE--E-cCCCCe-EEEEEcCCC
Confidence 346789999999999999999999999999999999999999999999999999999999 6 556666 899999999
Q ss_pred CeeccC--CCCCcceeeEEEecceEEEEecccccccccc
Q 040957 84 DYFGHG--SPTIFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 84 ~~fGe~--~~~~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
++||+. +.+.++.++++|+++|.++.|+++.|..+..
T Consensus 110 ~~fGe~~~~~~~~~~~~v~A~~~~~~~~i~~~~~~~l~~ 148 (161)
T 3idb_B 110 GSFGELALMYNTPRAATITATSPGALWGLDRVTFRRIIV 148 (161)
T ss_dssp CEECGGGGTCCCCCSSEEEESSSEEEEEEEHHHHHHHHH
T ss_pred CEechHHHHcCCCcccEEEECCCeEEEEEeHHHHHHHHH
Confidence 999999 7889999999999999999999999877765
No 12
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=99.69 E-value=4.4e-17 Score=142.65 Aligned_cols=115 Identities=14% Similarity=0.193 Sum_probs=106.9
Q ss_pred hhHHHHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEecc
Q 040957 3 PDEVIEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKR 82 (430)
Q Consensus 3 ~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~ 82 (430)
.+.+.++|+++++|..|+++++..++..++.+.|++|++|+++|+.++++|+|++|.++++ ..+.+|++ .++..+.+
T Consensus 34 ~~~~~~~L~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~i~~~G~~~~~ly~I~~G~v~v~--~~~~~g~~-~~~~~~~~ 110 (187)
T 3gyd_A 34 FEEILEIVNKIKLFGDFSNEEVRYLCSYMQCYAAPRDCQLLTEGDPGDYLLLILTGEVNVI--KDIPNKGI-QTIAKVGA 110 (187)
T ss_dssp HHHHHHHHTTCCSSCCCCHHHHHHHHTTCEEEEECTTCEEECTTSCCCEEEEEEEEEEEEE--EEETTTEE-EEEEEEET
T ss_pred HHHHHHHHhcCHhhhcCCHHHHHHHHHhcEEEEeCCCCEEEcCCCCCCeEEEEEeCEEEEE--EECCCCCe-EEEEEccC
Confidence 3567889999999999999999999999999999999999999999999999999999999 76667777 89999999
Q ss_pred CCeeccC--CCCCcceeeEEEecceEEEEecccccccccc
Q 040957 83 YDYFGHG--SPTIFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 83 G~~fGe~--~~~~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
|++||+. +.+.++.++++|.++|+++.|+++.|..+..
T Consensus 111 G~~fGe~~~l~~~~~~~~v~A~~~~~v~~i~~~~~~~l~~ 150 (187)
T 3gyd_A 111 GAIIGEMSMIDGMPRSASCVASLPTDFAVLSRDALYQLLA 150 (187)
T ss_dssp TCEESHHHHHHCCCCSSEEEEEEEEEEEEEEHHHHHHHHH
T ss_pred CCeeeeHHHhCCCCeeEEEEECCCeEEEEEcHHHHHHHHH
Confidence 9999999 7788999999999999999999999877755
No 13
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=99.65 E-value=1.5e-16 Score=143.31 Aligned_cols=113 Identities=13% Similarity=0.138 Sum_probs=105.8
Q ss_pred HHHHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCC
Q 040957 5 EVIEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYD 84 (430)
Q Consensus 5 ~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~ 84 (430)
++.++|+++++|..|+++++..+...++.+.|++|++|+.+|++++++|+|++|.|+++ ..+.+|++ .++.++.+|+
T Consensus 6 ~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~~~G~~-~~~~~~~~g~ 82 (227)
T 3dkw_A 6 VHQQLLQSHHLFEPLSPVQLQELLASSDLVNLDKGAYVFRQGEPAHAFYYLISGCVKIY--RLTPEGQE-KILEVTNERN 82 (227)
T ss_dssp SSHHHHTTSTTTSSSCHHHHHHHHTSCEEEECCTTEEEECTTSBCCEEEEEEESCEECC--BCCGGGCC-BCCCEECTTE
T ss_pred hHHHHHhcChhhcCCCHHHHHHHHhhCEEEEECCCCEEEcCCCccceEEEEEeCEEEEE--EECCCCCE-EEEEEcCCCC
Confidence 56789999999999999999999999999999999999999999999999999999999 87778877 8999999999
Q ss_pred eeccC--CCCCc-ceeeEEEecceEEEEecccccccccc
Q 040957 85 YFGHG--SPTIF-RQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 85 ~fGe~--~~~~~-~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
+||+. +.+.+ +.++++|.++|+++.|+++.|..+..
T Consensus 83 ~~G~~~~~~~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~ 121 (227)
T 3dkw_A 83 TFAEAMMFMDTPNYVATAQAVVPSQLFRFSNKAYLRQLQ 121 (227)
T ss_dssp EESCTTTTTTCSBCSSCEEESSCCEEEEEESHHHHHHHS
T ss_pred EeeeHHhcCCCCCCceEEEEcCcEEEEEEeHHHHHHHHH
Confidence 99999 67788 89999999999999999999877654
No 14
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=99.65 E-value=1.1e-16 Score=140.78 Aligned_cols=111 Identities=11% Similarity=0.042 Sum_probs=102.8
Q ss_pred HHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCee
Q 040957 7 IEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYF 86 (430)
Q Consensus 7 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~f 86 (430)
..+++.++.|..|+++++..+...+..+.|++|++|+.+|++++++|||++|.|+++ ..+.+|++ .++.++.+|++|
T Consensus 6 ~~l~~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~l~~~G~~~~~~y~i~~G~v~~~--~~~~~G~e-~~~~~~~~g~~~ 82 (194)
T 3dn7_A 6 TALINHIRKFIFLTDEDAGTLSAFFQLKKVRKKETLLKTGEICRINYFVVKGCLRLF--FIDEKGIE-QTTQFAIENWWL 82 (194)
T ss_dssp HHHHHHHHTTSCCCHHHHHHHHTTCEEEEECTTCEEECTTSBCCEEEEEEESEEEEE--EECTTSCE-EEEEEEETTCEE
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHhCEEEEEcCCCEEECCCCeeeEEEEeecCeEEEE--EECCCCCE-EEEEEccCCcEE
Confidence 467788899999999999999999999999999999999999999999999999999 77778877 899999999999
Q ss_pred ccC---CCCCcceeeEEEecceEEEEecccccccccc
Q 040957 87 GHG---SPTIFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 87 Ge~---~~~~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
|+. +.+.++.++++|+++|+++.|+++.|..+..
T Consensus 83 ge~~~~~~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~ 119 (194)
T 3dn7_A 83 SDYMAFQKQQPADFYIQSVENCELLSITYTEQENLFE 119 (194)
T ss_dssp CCHHHHHHTCBCSSEEEESSCEEEEEEEHHHHHHHHH
T ss_pred eehHHHhcCCCCceEEEEECCEEEEEEeHHHHHHHHH
Confidence 986 6788999999999999999999999877755
No 15
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=99.65 E-value=1.1e-16 Score=145.49 Aligned_cols=117 Identities=15% Similarity=0.163 Sum_probs=107.7
Q ss_pred CChhHHHHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEe
Q 040957 1 MDPDEVIEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQL 80 (430)
Q Consensus 1 M~~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~ 80 (430)
|+.+...++|+++++|..|+++++..++..++.+.|++|++|+.+|++++++|||++|.|+++ ..+.+|++ .++.++
T Consensus 4 m~~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~--~~~~~G~~-~~~~~~ 80 (237)
T 3fx3_A 4 MAHEAQKAIARNSLLIRSLPEQHVDALLSQAVWRSYDRGETLFLQEEKAQAIHVVIDGWVKLF--RMTPTGSE-AVVSVF 80 (237)
T ss_dssp --CHHHHHHHTTSHHHHTSCHHHHHHHHTTCEEEEECTTCEEECTTSCCCEEEEEEESEEEEE--EECTTSCE-EEEEEE
T ss_pred cchHHHHHHHhCCHhhccCCHHHHHHHHhhCEEEEECCCCEEEcCCCccceEEEEEeeEEEEE--EECCCCCE-EEEEEe
Confidence 566778899999999999999999999999999999999999999999999999999999999 77777777 899999
Q ss_pred ccCCeeccC--CCCCcceeeEEEecceEEEEecccccccccc
Q 040957 81 KRYDYFGHG--SPTIFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 81 ~~G~~fGe~--~~~~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
.+|++||+. +.+.++.++++|+++|+++.|+++.|..+..
T Consensus 81 ~~G~~~G~~~~~~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~ 122 (237)
T 3fx3_A 81 TRGESFGEAVALRNTPYPVSAEAVTPCEVMHIPSPVFVSLMR 122 (237)
T ss_dssp ETTEEECHHHHHHTCCCSSEEEESSSEEEEEEEHHHHHHHHH
T ss_pred CCCCEechHHHhcCCCCCceEEECCceEEEEEcHHHHHHHHH
Confidence 999999999 7788999999999999999999999877654
No 16
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=99.64 E-value=6.1e-16 Score=140.10 Aligned_cols=114 Identities=15% Similarity=0.142 Sum_probs=105.2
Q ss_pred hHHHHHhcCCCCCCCCCHHHHHHHHhh--ceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEec
Q 040957 4 DEVIEFLSCVPLLQRLPGSSLKRIADI--VIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLK 81 (430)
Q Consensus 4 ~~~~~~l~~~~~f~~l~~~~~~~l~~~--~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~ 81 (430)
.++..+++++++|..|+++++..++.. ++.+.|++|++|+.+|+.++++|||++|.|+++ ..+.+|++ .++.++.
T Consensus 14 ~~~~~~l~~~~lf~~l~~~~~~~l~~~~~~~~~~~~~ge~i~~~G~~~~~~y~i~~G~v~~~--~~~~~G~~-~~l~~~~ 90 (232)
T 1zyb_A 14 ETMFDTLLQLPLFQGLCHEDFTSILDKVKLHFIKHKAGETIIKSGNPCTQLCFLLKGEISIV--TNAKENIY-TVIEQIE 90 (232)
T ss_dssp HHHHTTGGGSGGGTTCCHHHHHHHHHTSCCEEEEECTTCEEECTTSBCCEEEEEEESEEEEE--EECGGGSC-EEEEEEE
T ss_pred HHHHHHHhcCccccCCCHHHHHHHHhhCCcEEEEECCCCEEECCCCcccEEEEEEeeEEEEE--EECCCCCE-EEEEEcc
Confidence 457788999999999999999999998 999999999999999999999999999999999 77777777 8999999
Q ss_pred cCCeeccC--CCCCc-ceeeEEEecceEEEEecccccccccc
Q 040957 82 RYDYFGHG--SPTIF-RQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 82 ~G~~fGe~--~~~~~-~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
+|++||+. +.+.+ +.++++|+++|+++.|+++.|..+..
T Consensus 91 ~G~~fG~~~~~~~~~~~~~~~~A~~~~~v~~i~~~~~~~l~~ 132 (232)
T 1zyb_A 91 APYLIEPQSLFGMNTNYASSYVAHTEVHTVCISKAFVLSDLF 132 (232)
T ss_dssp SSEEECGGGGSSSCCBCSSEEEESSCEEEEEEEHHHHHHTGG
T ss_pred CCCeeeehHHhCCCCCCceEEEEccceEEEEEEHHHHHHHhc
Confidence 99999999 66777 89999999999999999998876655
No 17
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=99.64 E-value=5.1e-16 Score=128.80 Aligned_cols=109 Identities=19% Similarity=0.289 Sum_probs=100.2
Q ss_pred hHHHHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccC
Q 040957 4 DEVIEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRY 83 (430)
Q Consensus 4 ~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G 83 (430)
+.+.++|+++++|..|+++++..++..++.+.|++|++|+++|+.++++|||++|.++++ . +| .++..+.+|
T Consensus 19 ~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~---~g---~~~~~~~~G 90 (139)
T 3ocp_A 19 DLIKEAILDNDFMKNLELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLVYVMEDGKVEVT--K---EG---VKLCTMGPG 90 (139)
T ss_dssp HHHHHHHHHCTTTTTSCHHHHHHHHHHCEEEEECSSCEEECTTSCCCEEEEEEECCEEEE--E---TT---EEEEEECTT
T ss_pred HHHHHHHhcCHhhhcCCHHHHHHHHHhcEEEecCCCCEEEeCCCcCCEEEEEEeCEEEEE--E---CC---EEEEEeCCC
Confidence 356789999999999999999999999999999999999999999999999999999998 3 22 478899999
Q ss_pred CeeccC--CCCCcceeeEEEecceEEEEecccccccccc
Q 040957 84 DYFGHG--SPTIFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 84 ~~fGe~--~~~~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
++||+. +.+.++.++++|.++|.++.|+++.|..+..
T Consensus 91 ~~fGe~~~l~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~ 129 (139)
T 3ocp_A 91 KVFGELAILYNCTRTATVKTLVNVKLWAIDRQCFQTIMM 129 (139)
T ss_dssp CEESCHHHHHCCCCSSEEEESSCEEEEEEEHHHHHHHHT
T ss_pred CEeccHHHHCCCCcceEEEECcceEEEEEcHHHHHHHHh
Confidence 999999 7888999999999999999999999877765
No 18
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=99.64 E-value=2.6e-16 Score=141.97 Aligned_cols=113 Identities=16% Similarity=0.242 Sum_probs=104.5
Q ss_pred HHHHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCC
Q 040957 5 EVIEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYD 84 (430)
Q Consensus 5 ~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~ 84 (430)
.+.++|+++++|..|+++++..++..++.+.|++|++|+.+|++++++|||++|.|+++ ..+.+|++ .++.++.+|+
T Consensus 3 ~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~--~~~~~g~~-~~~~~~~~G~ 79 (227)
T 3d0s_A 3 HMDEILARAGIFQGVEPSAIAALTKQLQPVDFPRGHTVFAEGEPGDRLYIIISGKVKIG--RRAPDGRE-NLLTIMGPSD 79 (227)
T ss_dssp -CHHHHTTSSTTSSCCSSTTHHHHTTSCEEEECTTCEEECTTCCCCEEEEEEESCEEEE--EECTTSCE-EEEEEECTTC
T ss_pred hHHHHHhcChhhcCCCHHHHHHHHhhCeEEEeCCCCEEEcCCCcCCEEEEEEeeEEEEE--EECCCCcE-EEEEEecCCC
Confidence 35678999999999999999999999999999999999999999999999999999999 77667777 8999999999
Q ss_pred eeccC--CCCCcceeeEEEecceEEEEecccccccccc
Q 040957 85 YFGHG--SPTIFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 85 ~fGe~--~~~~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
+||+. +.+.++.++++|.++|+++.|+++.|..+..
T Consensus 80 ~~G~~~~~~~~~~~~~~~A~~~~~v~~i~~~~~~~l~~ 117 (227)
T 3d0s_A 80 MFGELSIFDPGPRTSSATTITEVRAVSMDRDALRSWIA 117 (227)
T ss_dssp EESCHHHHSCSCCSSEEEESSCEEEEEEEHHHHHHTTS
T ss_pred EEeeHHHcCCCCceeEEEEcccEEEEEEeHHHHHHHHH
Confidence 99999 7788999999999999999999998876655
No 19
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=99.62 E-value=3.5e-16 Score=141.44 Aligned_cols=112 Identities=23% Similarity=0.294 Sum_probs=103.2
Q ss_pred HHHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCe
Q 040957 6 VIEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDY 85 (430)
Q Consensus 6 ~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~ 85 (430)
+.++|+++++|..|+++++..++..++.+.|++|++|+.+|++++++|+|++|.|+++ ..+.+|++ .++.++.+|++
T Consensus 4 ~~~~L~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~--~~~~~g~~-~~~~~~~~g~~ 80 (231)
T 3e97_A 4 RLDDLKRSPLFQNVPEDAMREALKVVTERNFQPDELVVEQDAEGEALHLVTTGVVRVS--RVSLGGRE-RVLGDIYAPGV 80 (231)
T ss_dssp CHHHHHTSGGGTTCCHHHHHHHHHTEEEEEECTTCBCCCTTCTTTCEEEECSSEEEEE--EECC--CE-EEEEEEESSEE
T ss_pred HHHHHhcChhhccCCHHHHHHHHHhcEEEEECCCCEEEeCCCCCCeEEEEEecEEEEE--EECCCCce-EEEEecCCCCE
Confidence 4688999999999999999999999999999999999999999999999999999999 77777777 89999999999
Q ss_pred eccC--CCCCcceeeEEEecceEEEEecccccccccc
Q 040957 86 FGHG--SPTIFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 86 fGe~--~~~~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
||+. +.+.++.++++|+++|+++.|+++.|..+..
T Consensus 81 ~G~~~~~~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~ 117 (231)
T 3e97_A 81 VGETAVLAHQERSASVRALTPVRTLMLHREHFELILR 117 (231)
T ss_dssp ESTTTTTCCCCCCEEEEESSCEEEEEECHHHHHHHHH
T ss_pred EeeHHHhCCCCceEEEEECCcEEEEEEeHHHHHHHHH
Confidence 9999 7788999999999999999999999877754
No 20
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=99.62 E-value=8.3e-16 Score=129.95 Aligned_cols=108 Identities=19% Similarity=0.197 Sum_probs=99.2
Q ss_pred HHHHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCC
Q 040957 5 EVIEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYD 84 (430)
Q Consensus 5 ~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~ 84 (430)
.+.++|+++++|..|+++++..++..++.+.|++|++|+++|+.++++|||++|.++++ . +| ..+..+.+|+
T Consensus 35 ~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~--~---~~---~~~~~~~~G~ 106 (154)
T 3pna_A 35 ALAKAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNFYVIDQGEMDVY--V---NN---EWATSVGEGG 106 (154)
T ss_dssp HHHHHHHHCGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESCEEEE--E---TT---EEEEEECTTC
T ss_pred HHHHHHHhChhhhhCCHHHHHHHHHhceEEEECCCCEEEeCCCCCCeEEEEEecEEEEE--E---CC---EEEEEecCCC
Confidence 46778999999999999999999999999999999999999999999999999999999 4 22 3678899999
Q ss_pred eeccC--CCCCcceeeEEEecceEEEEecccccccccc
Q 040957 85 YFGHG--SPTIFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 85 ~fGe~--~~~~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
+||+. +.+.++.++++|+++|.++.|+++.|..+..
T Consensus 107 ~fGe~~~~~~~~~~~~v~A~~~~~~~~i~~~~~~~ll~ 144 (154)
T 3pna_A 107 SFGELALIYGTPRAATVKAKTNVKLWGIDRDSYRRILM 144 (154)
T ss_dssp EECCHHHHHCCCCSSEEEESSCEEEEEEEHHHHHHHTH
T ss_pred EeeehHhhcCCCcceEEEECcceEEEEEeHHHHHHHHH
Confidence 99999 7788999999999999999999999887655
No 21
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=99.61 E-value=6.3e-16 Score=138.17 Aligned_cols=108 Identities=19% Similarity=0.264 Sum_probs=98.9
Q ss_pred hcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccC
Q 040957 10 LSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHG 89 (430)
Q Consensus 10 l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~ 89 (430)
|+++|+|..|+++++..+...++.+.|++|++|+.+|++++++|+|++|.++++ ..+.+|++ .++.++.+|++||+.
T Consensus 1 L~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~~~g~~-~~~~~~~~g~~~G~~ 77 (216)
T 4ev0_A 1 MKGSPLFHGLAPEEVDLALSYFQRRLYPQGKPIFYQGDLGQALYLVASGKVRLF--RTHLGGQE-RTLALLGPGELFGEM 77 (216)
T ss_dssp ---CGGGTTCCHHHHHHHHTTCEEEEECTTCEEECTTCBCCEEEEEEESCEEEE--EECSSSCE-EEEEEECTTCEECHH
T ss_pred CCCChhhcCCCHHHHHHHHHhheEEEeCCCCEEEeCCCCCCEEEEEEeCEEEEE--EECCCCCE-EEEEEecCCCEEeeh
Confidence 568899999999999999999999999999999999999999999999999999 77677777 899999999999999
Q ss_pred --CCCCcceeeEEEecceEEEEecccccccccc
Q 040957 90 --SPTIFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 90 --~~~~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
+.+.++.++++|.++|+++.|+++.|..+..
T Consensus 78 ~~~~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~ 110 (216)
T 4ev0_A 78 SLLDEGERSASAVAVEDTELLALFREDYLALIR 110 (216)
T ss_dssp HHHHCCBCSSEEEESSSEEEEEEEHHHHHHHHH
T ss_pred hhcCCCCcceEEEEcCCEEEEEEcHHHHHHHHH
Confidence 7788999999999999999999999877654
No 22
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=99.61 E-value=1.3e-15 Score=137.49 Aligned_cols=113 Identities=15% Similarity=0.103 Sum_probs=91.8
Q ss_pred HHHHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCC
Q 040957 5 EVIEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYD 84 (430)
Q Consensus 5 ~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~ 84 (430)
.+...++..++|..|+++++..+...++.+.|++|++|+.+|++++++|+|++|.++++ ..+.+|++ .++.++.+|+
T Consensus 8 ~~~~~lr~~~lf~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~~~G~~-~~~~~~~~g~ 84 (230)
T 3iwz_A 8 VVTTTVRNATPSLTLDAGTIERFLAHSHRRRYPTRTDVFRPGDPAGTLYYVISGSVSII--AEEDDDRE-LVLGYFGSGE 84 (230)
T ss_dssp --------------CCHHHHHHHHTTSEEEEECTTCEEECTTSBCCEEEEEEESCEEEE--EECTTSCE-EEEEEECTTC
T ss_pred eehhhhhhcchhccCCHHHHHHHHHhCeEEEeCCCCEEECCCCCCCeEEEEEeeEEEEE--EECCCCCE-EEEEEecCCC
Confidence 34678999999999999999999999999999999999999999999999999999999 77777777 8999999999
Q ss_pred eeccC--CCC-CcceeeEEEecceEEEEecccccccccc
Q 040957 85 YFGHG--SPT-IFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 85 ~fGe~--~~~-~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
+||+. +.+ .++.++++|.++|+++.|+++.|..+..
T Consensus 85 ~~G~~~~~~~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~ 123 (230)
T 3iwz_A 85 FVGEMGLFIESDTREVILRTRTQCELAEISYERLQQLFQ 123 (230)
T ss_dssp EESCGGGTSCCSBCCSEEEESSCEEEEEEEHHHHHHHHH
T ss_pred EEEehhhhcCCCCceeEEEEcCcEEEEEEeHHHHHHHHH
Confidence 99999 555 4789999999999999999998877655
No 23
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=99.60 E-value=1.3e-15 Score=136.54 Aligned_cols=111 Identities=17% Similarity=0.195 Sum_probs=101.3
Q ss_pred HHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCe-
Q 040957 7 IEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDY- 85 (430)
Q Consensus 7 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~- 85 (430)
.++|+++|+|..|+++++..+...++.+.|++|++|+.+|+.++++|+|++|.|+++ ..+.+|++ .++.++.+|++
T Consensus 2 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~--~~~~~G~~-~~~~~~~~G~~~ 78 (220)
T 3dv8_A 2 MSFENYFPLWNDLNTAQKKLISDNLITQHVKKGTIIHNGNMDCTGLLLVKSGQLRTY--ILSDEGRE-ITLYRLFDMDMC 78 (220)
T ss_dssp ---CCSCGGGGTSCHHHHHHHHTTCEEEEECTTCEEEEGGGCCCEEEEEEESCEEEE--EECTTSCE-EEEEEECTTCEE
T ss_pred cchHHhChhhhcCCHHHHHHHHhhCceEEeCCCCEEECCCCCcceEEEEEeceEEEE--EECCCCCE-EEEEecCCCCee
Confidence 368899999999999999999999999999999999999999999999999999999 77777777 89999999999
Q ss_pred -eccC--CCCCcceeeEEEecceEEEEecccccccccc
Q 040957 86 -FGHG--SPTIFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 86 -fGe~--~~~~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
||+. +.+.++.++++|+++|+++.|+++.|..+..
T Consensus 79 ~~g~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~ 116 (220)
T 3dv8_A 79 LLSASCIMRSIQFEVTIEAEKDTDLWIIPAEIYKGIMK 116 (220)
T ss_dssp SGGGGGGCTTCCCCCEEEESSCEEEEEEEHHHHHHHHH
T ss_pred ehhHHHHhCCCCCceEEEEeeeeEEEEEEHHHHHHHHH
Confidence 7887 7788999999999999999999999877655
No 24
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=99.60 E-value=3.6e-15 Score=126.55 Aligned_cols=107 Identities=17% Similarity=0.188 Sum_probs=97.9
Q ss_pred HHHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCe
Q 040957 6 VIEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDY 85 (430)
Q Consensus 6 ~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~ 85 (430)
..++|+++++|..++++++..++..++.+.|++|++|+++|+.++++|+|++|.++++ . ++ .++..+.+|++
T Consensus 25 ~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~-----~~-~~~~~~~~G~~ 96 (160)
T 4f8a_A 25 NRKVFKEHPAFRLASDGCLRALAMEFQTVHCAPGDLIYHAGESVDSLCFVVSGSLEVI--Q-----DD-EVVAILGKGDV 96 (160)
T ss_dssp THHHHTTCGGGTTCCHHHHHHHHTTCEEEEECTTCEEECTTSBCCEEEEEEESEEEEE--E-----TT-EEEEEEETTCE
T ss_pred HHHHHHhCHhhhhCCHHHHHHHHHhceeeeeCCCCEEEeCCCCccEEEEEEeeEEEEE--E-----CC-EEEEEecCCCE
Confidence 3568999999999999999999999999999999999999999999999999999999 4 22 68899999999
Q ss_pred eccC--CCC--CcceeeEEEecceEEEEecccccccccc
Q 040957 86 FGHG--SPT--IFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 86 fGe~--~~~--~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
||+. +.+ .++.++++|.++|+++.|+++.|..+..
T Consensus 97 fG~~~~~~~~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~ 135 (160)
T 4f8a_A 97 FGDVFWKEATLAQSCANVRALTYCDLHVIKRDALQKVLE 135 (160)
T ss_dssp EECCTTTCSSCCBCSSEEEESSCEEEEEEEHHHHHHHHH
T ss_pred eCcHHHhcCcccceEEEEEECCceEEEEEcHHHHHHHHH
Confidence 9999 555 6899999999999999999999887765
No 25
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=99.60 E-value=1.7e-15 Score=124.85 Aligned_cols=109 Identities=17% Similarity=0.300 Sum_probs=97.7
Q ss_pred hHHHHHhcCCCCCCCCCHHHHHHHHhhceEEEec-CCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEecc
Q 040957 4 DEVIEFLSCVPLLQRLPGSSLKRIADIVIVKRYG-KGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKR 82 (430)
Q Consensus 4 ~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~-~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~ 82 (430)
..+.++|+++++|..|+++++..|+..++.+.|+ +|++|+++|+.++++|||++|.|+++ . .+|+. ..+.+
T Consensus 12 ~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~--~~g~~----~~l~~ 83 (134)
T 2d93_A 12 EQLLEFMHQLPAFANMTMSVRRELCSVMIFEVVEQAGAIILEDGQELDSWYVILNGTVEIS--H--PDGKV----ENLFM 83 (134)
T ss_dssp HHHHHHHHHSSTTTSSCHHHHHHHTTTEEEEEECSSSCEEECTTCEECEEEECCBSCEEEE--C--SSSCE----EEECT
T ss_pred HHHHHHHhCCcchhhCCHHHHHHHHHhheEEEecCCCCEEEeCCCCCCeEEEEEeCEEEEE--c--CCCcE----EEecC
Confidence 3566899999999999999999999999999999 99999999999999999999999999 4 24433 56899
Q ss_pred CCeeccC--CCCCcceeeE-EEecceEEEEecccccccccc
Q 040957 83 YDYFGHG--SPTIFRQGDV-IALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 83 G~~fGe~--~~~~~~~~~v-~A~~~~~~l~i~~~~f~~l~~ 120 (430)
|++||+. +.+.++.+++ +|.++|.++.|+++.|..+..
T Consensus 84 G~~fG~~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~ 124 (134)
T 2d93_A 84 GNSFGITPTLDKQYMHGIVRTKVDDCQFVCIAQQDYWRILN 124 (134)
T ss_dssp TCEESCCSSSCCEECCSEEEESSSSEEEEEEEHHHHHHHSS
T ss_pred CCccChhHhcCCCcceeEEEEEecceEEEEEeHHHHHHHHH
Confidence 9999999 7788888898 999999999999998877655
No 26
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=99.58 E-value=1.9e-15 Score=124.95 Aligned_cols=107 Identities=23% Similarity=0.335 Sum_probs=97.6
Q ss_pred hHHHHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccC
Q 040957 4 DEVIEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRY 83 (430)
Q Consensus 4 ~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G 83 (430)
....++|+++++|..++++++..++..++.+.|++|++|+++|+.++++|||++|.++++ ..+ + ..+.+|
T Consensus 7 ~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~----~----~~~~~G 76 (138)
T 1vp6_A 7 VRNWQLVAAVPLFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVA--TPN----P----VELGPG 76 (138)
T ss_dssp HHHHHHHTTCGGGGGCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESCEEEC--SSS----C----EEECTT
T ss_pred HHHHHHHHhChhhhcCCHHHHHHHHHhhcEEEeCCCCEEEeCCCCcceEEEEEeeEEEEE--eCC----c----ceECCC
Confidence 356788999999999999999999999999999999999999999999999999999999 542 2 478999
Q ss_pred CeeccC--CCCCcceeeEEEecceEEEEecccccccccc
Q 040957 84 DYFGHG--SPTIFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 84 ~~fGe~--~~~~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
++||+. +.+.++.++++|.++|+++.|+++.|..+..
T Consensus 77 ~~~G~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~l~~ 115 (138)
T 1vp6_A 77 AFFGEMALISGEPRSATVSAATTVSLLSLHSADFQMLCS 115 (138)
T ss_dssp CEECHHHHHHCCCCSSCEEESSSEEEEEEEHHHHHHHHH
T ss_pred CEeeehHhccCCCceeEEEECCCEEEEEECHHHHHHHHH
Confidence 999999 7778899999999999999999999877655
No 27
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=99.58 E-value=8.9e-16 Score=126.86 Aligned_cols=110 Identities=22% Similarity=0.276 Sum_probs=96.5
Q ss_pred HHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceE--EeccCC
Q 040957 7 IEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEF--QLKRYD 84 (430)
Q Consensus 7 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~--~~~~G~ 84 (430)
.++|+++++|..|+++++..|+..++.+.|++|++|+++|+.++++|||++|.++++ ...+|++ .++. .+.+|+
T Consensus 5 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~---~~~~g~~-~~~~~~~l~~G~ 80 (137)
T 1wgp_A 5 SSGVRRVPLFENMDERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRLESV---TTDGGRS-GFYNRSLLKEGD 80 (137)
T ss_dssp SCSCSSCSGGGSCCHHHHHHHHHHCBCCCBCTTEEEECTTSBCSEEEEEEECCCEEE---CCSSCSS-SSSCEEECCTTC
T ss_pred HHHHHcCcchhhCCHHHHHHHHHHheEEEeCCCCEEEeCCCCCCeEEEEEeeEEEEE---EcCCCcc-eeeeeeeecCCC
Confidence 457899999999999999999999999999999999999999999999999999955 3445665 7777 999999
Q ss_pred eeccC-C----CCC------cceeeEEEecceEEEEecccccccccc
Q 040957 85 YFGHG-S----PTI------FRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 85 ~fGe~-~----~~~------~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
+||+. + .+. ++.++++|+++|+++.|+++.|..+..
T Consensus 81 ~fGe~~l~~~~~~~~~~~~~~~~~~~~A~~~~~~~~i~~~~~~~l~~ 127 (137)
T 1wgp_A 81 FCGDELLTWALDPKSGSNLPSSTRTVKALTEVEAFALIADELKFVAS 127 (137)
T ss_dssp BSSTHHHHHHHCSSCCSSSCBCSSEEEESSCBEEEEEEHHHHHHHHH
T ss_pred EecHHHHHHHhccccccccccceeEEEEeEEEEEEEECHHHHHHHHH
Confidence 99997 4 444 357899999999999999999877655
No 28
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=99.57 E-value=3.5e-15 Score=142.66 Aligned_cols=110 Identities=20% Similarity=0.131 Sum_probs=101.7
Q ss_pred HHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCee
Q 040957 7 IEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYF 86 (430)
Q Consensus 7 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~f 86 (430)
.++|+++++|..|+++++..|+..++.+.|++|++|+++|++++++|||++|.|+++ +.+.+|++ ++.++.+|++|
T Consensus 12 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~--~~~~~g~~--~~~~~~~G~~f 87 (333)
T 4ava_A 12 VEDLAGMDVFQGCPAEGLVSLAASVQPLRAAAGQVLLRQGEPAVSFLLISSGSAEVS--HVGDDGVA--IIARALPGMIV 87 (333)
T ss_dssp HHHHTTSGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSBCCCEEEEEECCEEEE--EECTTCCE--EEEEECTTCEE
T ss_pred HHHHhCCHhHhcCCHHHHHHHHhhCeEEEECCCCEEEeCCCcCCEEEEEEeeEEEEE--EECCCCcE--EEEEecCCCEe
Confidence 578999999999999999999999999999999999999999999999999999999 66656553 88899999999
Q ss_pred ccC--CCCCcceeeEEEecceEEEEecccccccccc
Q 040957 87 GHG--SPTIFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 87 Ge~--~~~~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
|+. +.+.++.++++|+++|.++.|+++.|+.+.+
T Consensus 88 Ge~~l~~~~~~~~~v~A~~~~~~~~i~~~~~~~l~~ 123 (333)
T 4ava_A 88 GEIALLRDSPRSATVTTIEPLTGWTGGRGAFATMVH 123 (333)
T ss_dssp SHHHHHHTCBCSSEEEESSCEEEEEECHHHHHHHHH
T ss_pred eHHHhcCCCCceEEEEEecCEEEEEEcHHHHHHHHh
Confidence 999 7889999999999999999999999876654
No 29
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=99.56 E-value=5.3e-15 Score=130.47 Aligned_cols=108 Identities=19% Similarity=0.323 Sum_probs=98.8
Q ss_pred HHHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCe
Q 040957 6 VIEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDY 85 (430)
Q Consensus 6 ~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~ 85 (430)
...+|+++++|..++++.+..|+..++.+.|.+|++|+++|+.++++|||.+|.|+++ . .+|+ ++..+.+|++
T Consensus 69 ~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~~~--~--~~g~---~~~~l~~G~~ 141 (198)
T 2ptm_A 69 CRDLVASVPFFVGADSNFVTRVVTLLEFEVFQPADYVIQEGTFGDRMFFIQQGIVDII--M--SDGV---IATSLSDGSY 141 (198)
T ss_dssp THHHHHHCGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCSEEEEEEECCEEEE--C--TTSC---EEEEECTTCE
T ss_pred HHHHHhcCcchhcCCHHHHHHHHHhccceeeCCCCEEEECCCcCcEEEEEEeCEEEEE--e--cCCe---EEEEecCCCE
Confidence 3568899999999999999999999999999999999999999999999999999999 5 2333 6889999999
Q ss_pred eccC--CCCCcceeeEEEecceEEEEecccccccccc
Q 040957 86 FGHG--SPTIFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 86 fGe~--~~~~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
||+. +.+.++.++++|.++|+++.|++++|..+..
T Consensus 142 fGe~~~~~~~~~~~~~~a~~~~~l~~i~~~~f~~ll~ 178 (198)
T 2ptm_A 142 FGEICLLTRERRVASVKCETYCTLFSLSVQHFNQVLD 178 (198)
T ss_dssp ESCHHHHHSSCCSSEEEESSCEEEEEEEHHHHHHHHH
T ss_pred echHHHcCCCccceEEEEeeEEEEEEEeHHHHHHHHH
Confidence 9999 7888999999999999999999999877655
No 30
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=99.55 E-value=8.1e-15 Score=144.25 Aligned_cols=112 Identities=17% Similarity=0.145 Sum_probs=104.0
Q ss_pred HHHHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCC
Q 040957 5 EVIEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYD 84 (430)
Q Consensus 5 ~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~ 84 (430)
.+.++|+++++|..|+++++..|+..+..+.|++|++|+++|+.++++|||++|.|+++ . ..+|++ .++..+.+|+
T Consensus 142 ~i~~~L~~~~lF~~L~~~~l~~l~~~~~~~~~~~Ge~I~~qGd~~d~~YiI~sG~v~v~--~-~~~G~~-~~v~~l~~G~ 217 (416)
T 3tnp_B 142 RLQEACKDILLFKNLDPEQMSQVLDAMFEKLVKEGEHVIDQGDDGDNFYVIDRGTFDIY--V-KCDGVG-RCVGNYDNRG 217 (416)
T ss_dssp HHHHHHTTSHHHHTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEECEEEEE--E-ECSSCE-EEEEEEESCC
T ss_pred HHHHHHhCCHhHhcCCHHHHHHHHHhcEEEEeCCCCEEEeCCCCCceEEEEEeeEEEEE--E-ecCCCE-EEEEEecCCC
Confidence 46789999999999999999999999999999999999999999999999999999999 5 445665 8899999999
Q ss_pred eeccC--CCCCcceeeEEEecceEEEEecccccccccc
Q 040957 85 YFGHG--SPTIFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 85 ~fGe~--~~~~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
+||+. +.+.++.++++|.++|.++.|+++.|+.+..
T Consensus 218 ~fGe~all~~~pr~atv~A~~d~~l~~i~r~~f~~ll~ 255 (416)
T 3tnp_B 218 SFGELALMYNTPKAATITATSPGALWGLDRVTFRRIIV 255 (416)
T ss_dssp EECGGGGTSCCCCSSEEEESSSEEEEEEEHHHHHHHHH
T ss_pred EEeeHHHhcCCCcccEEEEccCeEEEEEeehhhhhhhh
Confidence 99999 8899999999999999999999999887765
No 31
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=99.55 E-value=1.2e-14 Score=132.39 Aligned_cols=110 Identities=15% Similarity=0.150 Sum_probs=101.1
Q ss_pred hhHHHHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEecc
Q 040957 3 PDEVIEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKR 82 (430)
Q Consensus 3 ~~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~ 82 (430)
.+.+.++|+++++|..|+++++..++..++.+.|++|++|+++|++++++|+|++|.++++ .. + ..+..+.+
T Consensus 2 ~~~i~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~v~--~~---~---~~~~~~~~ 73 (246)
T 3of1_A 2 LQRLEKSIRNNFLFNKLDSDSKRLVINCLEEKSVPKGATIIKQGDQGDYFYVVEKGTVDFY--VN---D---NKVNSSGP 73 (246)
T ss_dssp CHHHHHHHHTCTTTTTSCHHHHHHHHTTCEEEEECTTCEEECTTCCCCEEEEEEECCEEEE--ST---T---SCCEEECT
T ss_pred hHHHHHHHhcCHhhHhCCHHHHHHHHHhhceEEECCCCEEEecCCCCCEEEEEEeeEEEEE--EC---C---EEEEecCC
Confidence 3568899999999999999999999999999999999999999999999999999999999 42 2 34689999
Q ss_pred CCeeccC--CCCCcceeeEEEecceEEEEecccccccccc
Q 040957 83 YDYFGHG--SPTIFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 83 G~~fGe~--~~~~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
|++||+. +.+.++.++++|.++|.++.|+++.|..+..
T Consensus 74 g~~fGe~~l~~~~~~~~tv~a~~~~~~~~i~~~~~~~~~~ 113 (246)
T 3of1_A 74 GSSFGELALMYNSPRAATVVATSDCLLWALDRLTFRKILL 113 (246)
T ss_dssp TCEECHHHHHHTCCCSSEEEESSCEEEEEEEHHHHHHTTT
T ss_pred CCeeehhHHhcCCCCCcEEEECCCeEEEEEEhHHHHHHHH
Confidence 9999999 7889999999999999999999999887765
No 32
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=99.54 E-value=1.5e-14 Score=128.57 Aligned_cols=104 Identities=17% Similarity=0.140 Sum_probs=92.1
Q ss_pred CCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccC--CC
Q 040957 14 PLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHG--SP 91 (430)
Q Consensus 14 ~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~--~~ 91 (430)
++++.++++++..++..++.+.|++|++|+.+|++++++|+|++|.++++ ..+.+|++ .++.++.+|++||+. +.
T Consensus 2 ~l~~~l~~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~~~g~~-~~~~~~~~g~~~G~~~~~~ 78 (210)
T 3ryp_A 2 VLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVL--IKDEEGKE-MILSYLNQGDFIGELGLFE 78 (210)
T ss_dssp -----CCCHHHHHHHTTSEEEEECTTCEEECTTSBCCEEEEEEESEEEEE--EECTTCCE-EEEEEEETTCEESCTTTTS
T ss_pred cCCCcCCHHHHHHHHHhcEEEEeCCCCEEECCCCCCCeEEEEEeCEEEEE--EECCCCCE-EEEEEcCCCCEeeeHHHhc
Confidence 45677999999999999999999999999999999999999999999999 77777777 899999999999999 66
Q ss_pred CC-cceeeEEEecceEEEEecccccccccc
Q 040957 92 TI-FRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 92 ~~-~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
+. ++.++++|+++|+++.|+++.|..+..
T Consensus 79 ~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~ 108 (210)
T 3ryp_A 79 EGQERSAWVRAKTACEVAEISYKKFRQLIQ 108 (210)
T ss_dssp TTCBCSSEEEESSCEEEEEEEHHHHHHHHH
T ss_pred CCCCceEEEEECCcEEEEEEcHHHHHHHHH
Confidence 66 899999999999999999999877654
No 33
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=99.54 E-value=4.7e-15 Score=134.09 Aligned_cols=106 Identities=16% Similarity=0.171 Sum_probs=95.0
Q ss_pred CCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccC--
Q 040957 12 CVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHG-- 89 (430)
Q Consensus 12 ~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~-- 89 (430)
.+|+|..|+++++..++..++.+.|++|++|+.+|++++++|+|++|.++++ ..+.+|++ .++.++.+|++||+.
T Consensus 14 ~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~v~~G~v~~~--~~~~~g~~-~~~~~~~~G~~~G~~~~ 90 (232)
T 2gau_A 14 LRDVWSLLNEEERELLDKEIQPFPCKKASTVFSEGDIPNNLFYLYEGKIKIL--REGVYGRF-HISRIVKPGQFFGMRPY 90 (232)
T ss_dssp SHHHHTTCCHHHHHHHHHHCEEEEECTTCEEECTTCCCCEEEEEEESCEEEE--C-----CC-CEEEEECTTCEESHHHH
T ss_pred ccHhhhcCCHHHHHHHHhhCeEEEECCCCEEEeCCCCCCeEEEEEeCEEEEE--EECCCCCE-EEEEEeCCCCEeeeehh
Confidence 5788999999999999999999999999999999999999999999999999 77777777 899999999999999
Q ss_pred CCCCcceeeEEEecceEEEEecccccccccc
Q 040957 90 SPTIFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 90 ~~~~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
+.+.++.++++|+++|+++.|+++.|..+..
T Consensus 91 ~~~~~~~~~~~A~~~~~v~~i~~~~~~~l~~ 121 (232)
T 2gau_A 91 FAEETCSSTAIAVENSKVLAIPVEAIEALLK 121 (232)
T ss_dssp HHTSCCSSEEEESSCEEEEEEEHHHHHHHHH
T ss_pred hCCCCcceEEEEecceEEEEEEHHHHHHHHH
Confidence 6788999999999999999999998877654
No 34
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=99.53 E-value=3.8e-14 Score=133.27 Aligned_cols=108 Identities=19% Similarity=0.278 Sum_probs=100.2
Q ss_pred HHHHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCC
Q 040957 5 EVIEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYD 84 (430)
Q Consensus 5 ~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~ 84 (430)
.+.++|+++++|..|+++++..|+..+..+.|++|++|+++|+.++++|||++|.|+++ .. | .++..+.+|+
T Consensus 36 ~i~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~yiI~~G~v~v~--~~---g---~~~~~~~~G~ 107 (299)
T 3shr_A 36 LIKEAILDNDFMKNLELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLVYVMEDGKVEVT--KE---G---VKLCTMGPGK 107 (299)
T ss_dssp HHHHHHHTCTTTTTSCHHHHHHHHHHCEEEEECTTCEEECTTCBCCCEEEEEESCEEEE--ET---T---EEEEEECTTC
T ss_pred HHHHHHhhCHHHHcCCHHHHHHHHHhcCeEEECCCCEEEcCCCcCceEEEEEEEEEEEE--EC---C---EEEEEeCCCC
Confidence 46788999999999999999999999999999999999999999999999999999998 32 2 5788999999
Q ss_pred eeccC--CCCCcceeeEEEecceEEEEecccccccccc
Q 040957 85 YFGHG--SPTIFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 85 ~fGe~--~~~~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
+||+. +.+.++.++++|.++|.++.|+++.|+.+..
T Consensus 108 ~fGe~~ll~~~~~~~tv~a~~~~~l~~i~~~~~~~i~~ 145 (299)
T 3shr_A 108 VFGELAILYNCTRTATVKTLVNVKLWAIDRQCFQTIMM 145 (299)
T ss_dssp EESCSGGGTTTBCCSEEEESSCEEEEEECHHHHHHHHH
T ss_pred eeeHhHHhcCCCCCcEEEEcCCeEEEEEcHHHHHHHhh
Confidence 99999 8889999999999999999999999887765
No 35
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=99.52 E-value=1.3e-14 Score=136.57 Aligned_cols=113 Identities=32% Similarity=0.548 Sum_probs=104.0
Q ss_pred HHHHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEeccc-ccccCCcceEEeccC
Q 040957 5 EVIEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSV-QAEEEDRPEFQLKRY 83 (430)
Q Consensus 5 ~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~-~~g~~~~~~~~~~~G 83 (430)
.+.++++++++|..++++++..++..+..+.|++|++|+++|+.++++|||++|.++++ ... .+|++ .++..+.+|
T Consensus 154 ~~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~g~~I~~~G~~~~~~yiI~~G~v~~~--~~~~~~g~~-~~~~~l~~G 230 (299)
T 3shr_A 154 EYMEFLKSVPTFQSLPEEILSKLADVLEETHYENGEYIIRQGARGDTFFIISKGKVNVT--REDSPNEDP-VFLRTLGKG 230 (299)
T ss_dssp HHHHHHTTSHHHHHSCHHHHHHHTTTCEEEEECTTCEEECTTCEECEEEEEEESEEEEE--ECCSSSCCC-EEEEEEETT
T ss_pred HHHHHHhhCHHhhhCCHHHHHHHHHhccEEEECCCCEEEeCCCCCCEEEEEEeeEEEEE--EecCCCCcc-eEEEEcCCC
Confidence 45678999999999999999999999999999999999999999999999999999999 665 45555 899999999
Q ss_pred CeeccC--CCCCcceeeEEEecceEEEEecccccccccc
Q 040957 84 DYFGHG--SPTIFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 84 ~~fGe~--~~~~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
++||+. +.+.++.++++|.++|.++.|+++.|..+..
T Consensus 231 ~~fGe~~ll~~~~~~~tv~a~~~~~l~~i~~~~f~~ll~ 269 (299)
T 3shr_A 231 DWFGEKALQGEDVRTANVIAAEAVTCLVIDRDSFKHLIG 269 (299)
T ss_dssp CEECGGGGSSSEECSSEEEESSSEEEEEEEHHHHHHHHT
T ss_pred CEeChHHHhCCCCcceEEEECCCEEEEEEeHHHHHHHHc
Confidence 999999 7888999999999999999999999877755
No 36
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=99.52 E-value=3.8e-14 Score=126.35 Aligned_cols=103 Identities=22% Similarity=0.295 Sum_probs=94.4
Q ss_pred hcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccC
Q 040957 10 LSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHG 89 (430)
Q Consensus 10 l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~ 89 (430)
+.++|+|..++++.+..|+..++.+.|.+|++|+++|+.++++|||.+|.|+++ .. | .++..+.+|++||+.
T Consensus 77 l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~--~~---~---~~~~~l~~G~~fGe~ 148 (212)
T 3ukn_A 77 LLQLPLFESASRGCLRSLSLIIKTSFCAPGEFLIRQGDALQAIYFVCSGSMEVL--KD---N---TVLAILGKGDLIGSD 148 (212)
T ss_dssp GGGSGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSBCCEEEEEEECCEEEE--SS---S---CEEEEECTTCEEECS
T ss_pred HHhcHHhhcCCHHHHHHHHHHhheEEeCCCCEEEECCCcccEEEEEEecEEEEE--EC---C---eEEEEecCCCCcCcH
Confidence 447999999999999999999999999999999999999999999999999999 42 2 678999999999999
Q ss_pred --CCCC--cceeeEEEecceEEEEecccccccccc
Q 040957 90 --SPTI--FRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 90 --~~~~--~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
+.+. ++.++++|+++|+++.|++++|..+..
T Consensus 149 ~~~~~~~~~~~~~v~a~~~~~l~~i~~~~f~~ll~ 183 (212)
T 3ukn_A 149 SLTKEQVIKTNANVKALTYCDLQYISLKGLREVLR 183 (212)
T ss_dssp CCSSSSCCBBCSEEEESSCEEEEEEEHHHHHHHHH
T ss_pred HhccCCCCCcceEEEEcccEEEEEEeHHHHHHHHH
Confidence 6666 899999999999999999999877655
No 37
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=99.52 E-value=5.3e-14 Score=131.64 Aligned_cols=113 Identities=27% Similarity=0.326 Sum_probs=102.7
Q ss_pred HHHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCe
Q 040957 6 VIEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDY 85 (430)
Q Consensus 6 ~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~ 85 (430)
+..++.++++|..++..++..++..++.+.|++|++|+++|+.++++|+|++|.++++ ....+|+++.++..+.+|++
T Consensus 155 ~~~~l~~~~lf~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~~~~~~~~~~~~l~~G~~ 232 (291)
T 2qcs_B 155 YEEFLSKVSILESLDKWERLTVADALEPVQFEDGQKIVVQGEPGDEFFIILEGSAAVL--QRRSENEEFVEVGRLGPSDY 232 (291)
T ss_dssp HHHHHHTCGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEEEEEEEE--EECSTTSCEEEEEEECTTCE
T ss_pred HHHHHhhchHhhhCCHHHHHHHHhhcEEEEECCCCEEEeCCccCCEEEEEEeCEEEEE--EecCCCCccEEEEEeCCCCE
Confidence 4567889999999999999999999999999999999999999999999999999999 65555555478999999999
Q ss_pred eccC--CCCCcceeeEEEecceEEEEecccccccccc
Q 040957 86 FGHG--SPTIFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 86 fGe~--~~~~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
||+. +.+.++.++++|.++|.++.|+++.|..+..
T Consensus 233 fGe~~ll~~~~~~~tv~a~~~~~~~~i~~~~f~~~l~ 269 (291)
T 2qcs_B 233 FGEIALLMNRPKAATVVARGPLKCVKLDRPRFERVLG 269 (291)
T ss_dssp ECSGGGTCCCCCSSEEEEEEEEEEEEEEHHHHHHHHC
T ss_pred ecHHHHcCCCCcceEEEECCcEEEEEEcHHHHHHHhc
Confidence 9999 7888999999999999999999999876655
No 38
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=99.52 E-value=3.9e-14 Score=125.55 Aligned_cols=99 Identities=19% Similarity=0.155 Sum_probs=90.0
Q ss_pred CCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccC--CCCC---
Q 040957 19 LPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHG--SPTI--- 93 (430)
Q Consensus 19 l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~--~~~~--- 93 (430)
|+++++..++..++.+.|++|++|+.+|++++++|||++|.++++ ..+.+|++ .++.++.+|++||+. +.+.
T Consensus 1 l~~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~~~G~~-~~~~~~~~g~~~G~~~~~~~~~~~ 77 (207)
T 2oz6_A 1 MKLKHLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTIL--IEDDDGRE-MIIGYLNSGDFFGELGLFEKEGSE 77 (207)
T ss_dssp CCHHHHHHHHHSSEEEEECTTCEEECTTSBCCEEEEEEESEEEEE--EECTTSCE-EEEEEEETTCEESCTTTCC-----
T ss_pred CCHHHHHHHHhhcceEEECCCCEEEcCCCCCCeEEEEEeCEEEEE--EECCCCCE-EEEEEcCCCCCcccHHHhcCCCCC
Confidence 688999999999999999999999999999999999999999999 77767777 899999999999999 6666
Q ss_pred -cceeeEEEecceEEEEecccccccccc
Q 040957 94 -FRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 94 -~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
++.++++|+++|+++.|+++.|..+..
T Consensus 78 ~~~~~~~~A~~~~~v~~i~~~~~~~l~~ 105 (207)
T 2oz6_A 78 QERSAWVRAKVECEVAEISYAKFRELSQ 105 (207)
T ss_dssp CBCCSEEEESSCEEEEEEEHHHHHHHHH
T ss_pred CCcceEEEECCcEEEEEECHHHHHHHHH
Confidence 799999999999999999998877654
No 39
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=99.51 E-value=1.6e-14 Score=127.79 Aligned_cols=107 Identities=22% Similarity=0.349 Sum_probs=96.7
Q ss_pred HHHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCe
Q 040957 6 VIEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDY 85 (430)
Q Consensus 6 ~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~ 85 (430)
+..+|+++++|.+++++.+..|+..++.+.|.+|++|+.+|+.++++|||.+|.|+++ .. +|++ ..+.+|++
T Consensus 70 ~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~ge~I~~~g~~~~~ly~I~~G~v~v~--~~--~g~~----~~l~~G~~ 141 (202)
T 3bpz_A 70 CRKLVASMPLFANADPNFVTAMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVVSVL--TK--GNKE----MKLSDGSY 141 (202)
T ss_dssp THHHHHTCHHHHTSCHHHHHHHHHHCEEEEECTTCEEECTTSBCCEEEEEEECEEEEE--CT--TSCC----EEEETTCE
T ss_pred HHHHHhcCCchhcCCHHHHHHHHHhCCceEECCCCEEEECCCcCCeEEEEeccEEEEE--EC--CCeE----EEEcCCCE
Confidence 3468889999999999999999999999999999999999999999999999999998 42 4443 36899999
Q ss_pred eccC--CCCCcceeeEEEecceEEEEecccccccccc
Q 040957 86 FGHG--SPTIFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 86 fGe~--~~~~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
||+. +.+.++.++++|.++|.++.|++++|..+..
T Consensus 142 fGe~~~~~~~~~~~~v~a~~~~~l~~i~~~~f~~ll~ 178 (202)
T 3bpz_A 142 FGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLE 178 (202)
T ss_dssp ECHHHHHHCSBCSSEEEESSCEEEEEEEHHHHHHHHH
T ss_pred eccHHHhcCCCcccEEEEeeEEEEEEEEHHHHHHHHH
Confidence 9999 7788999999999999999999999877655
No 40
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=99.50 E-value=4.9e-14 Score=129.82 Aligned_cols=102 Identities=17% Similarity=0.135 Sum_probs=90.3
Q ss_pred CCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccC--CCCC
Q 040957 16 LQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHG--SPTI 93 (430)
Q Consensus 16 f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~--~~~~ 93 (430)
...|+++++..++..++.+.|++|++|+.+|++++++|||++|.|+++ ..+.+|++ .++.++.+|++||+. +.+.
T Consensus 54 ~~~l~~~~l~~l~~~~~~~~~~~ge~i~~~G~~~~~~y~I~~G~v~~~--~~~~~G~e-~~~~~~~~G~~~Ge~~~~~~~ 130 (260)
T 3kcc_A 54 GKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVL--IKDEEGKE-MILSYLNQGDFIGELGLFEEG 130 (260)
T ss_dssp -----CHHHHHHHTTSEEEEECTTCEEECTTCBCCEEEEEEECEEEEE--EECTTCCE-EEEEEEETTCEESCTTTTSTT
T ss_pred cCCCCHHHHHHHHhhCEEEEECCCCEEECCCCcCCeEEEEEeCEEEEE--EECCCCCE-EEEEEcCCCCEEeehHHhCCC
Confidence 366899999999999999999999999999999999999999999999 77777777 899999999999999 6666
Q ss_pred -cceeeEEEecceEEEEecccccccccc
Q 040957 94 -FRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 94 -~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
++.++++|+++|+++.|+++.|..+..
T Consensus 131 ~~~~~~~~A~~~~~l~~i~~~~~~~l~~ 158 (260)
T 3kcc_A 131 QERSAWVRAKTACEVAEISYKKFRQLIQ 158 (260)
T ss_dssp CBCCSEEEESSCEEEEEEEHHHHHHHHH
T ss_pred CCCceEEEECCCeEEEEEcHHHHHHHHH
Confidence 899999999999999999999877655
No 41
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=99.49 E-value=8.8e-14 Score=139.26 Aligned_cols=115 Identities=20% Similarity=0.225 Sum_probs=105.5
Q ss_pred hHHHHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccC-CcceEEecc
Q 040957 4 DEVIEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEE-DRPEFQLKR 82 (430)
Q Consensus 4 ~~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~-~~~~~~~~~ 82 (430)
+.+.++|+++++|..|+++++..|+..+..+.|++|++|+++|+.++++|+|++|.|+++ ....+|++ +.++.++.+
T Consensus 38 ~~i~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~Gd~~~~~y~i~~G~v~v~--~~~~~g~~~~~~~~~~~~ 115 (469)
T 1o7f_A 38 DIIFTRLKGVKAFEKFHPNLLRQICLCGYYENLEKGITLFRQGDIGTNWYAVLAGSLDVK--VSETSSHQDAVTICTLGI 115 (469)
T ss_dssp HHHHHHHTTCTTTTTCCHHHHHHHHHHCEEEEECTTCEEECTTSBCCEEEEEEESCEEEE--ECSSSCGGGCEEEEEECT
T ss_pred HHHHHHHhCCHhhhcCCHHHHHHHHHhceEEEECCCCEEEeCCCCCCcEEEEEeeEEEEE--EecCCCCCcceEEEEccC
Confidence 346788999999999999999999999999999999999999999999999999999999 76666642 378999999
Q ss_pred CCeeccC-CCCCcceeeEEEecceEEEEecccccccccc
Q 040957 83 YDYFGHG-SPTIFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 83 G~~fGe~-~~~~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
|++||+. +.+.++.++++|.++|.++.|+++.|..+..
T Consensus 116 G~~fGe~~l~~~~~~~tv~A~~~~~l~~i~~~~~~~l~~ 154 (469)
T 1o7f_A 116 GTAFGESILDNTPRHATIVTRESSELLRIEQEDFKALWE 154 (469)
T ss_dssp TCEECGGGGGTCBCSSEEEESSSEEEEEEEHHHHHHHHH
T ss_pred CCCcchhhhCCCCccceEEEccceeEEEEcHHHHHHHHH
Confidence 9999999 8899999999999999999999999887755
No 42
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=99.49 E-value=2.2e-14 Score=139.57 Aligned_cols=113 Identities=29% Similarity=0.346 Sum_probs=104.6
Q ss_pred HHHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCe
Q 040957 6 VIEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDY 85 (430)
Q Consensus 6 ~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~ 85 (430)
+..+++++++|..++++++..++..+..+.|++|++|+++|+.++++|||++|.|+++ +...+|+++.++..+.+|++
T Consensus 246 ~~~~L~~v~~f~~Ls~~el~~l~~~~~~~~~~~ge~I~~eGd~~~~~yiI~~G~v~v~--~~~~~~~~~~~v~~l~~Gd~ 323 (381)
T 4din_B 246 YEEFLSKVSILESLEKWERLTVADALEPVQFEDGEKIVVQGEPGDDFYIITEGTASVL--QRRSPNEEYVEVGRLGPSDY 323 (381)
T ss_dssp HHHHHHHCSTTTTCCTTHHHHHHTTCBCCCBCSSCBSSCTTSBCCEEEEEEESCEEEE--CCSSSSSCCCEEEEECTTCE
T ss_pred HHHHhhhhHHHHhccHHHHHHHHHhhhhccCCCCCEEEeCCCcCCEEEEEEeCEEEEE--EecCCCCceEEEEEeCCCCE
Confidence 4568899999999999999999999999999999999999999999999999999999 77666665577999999999
Q ss_pred eccC--CCCCcceeeEEEecceEEEEecccccccccc
Q 040957 86 FGHG--SPTIFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 86 fGe~--~~~~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
||+. +.+.++.++++|.++|.++.|+++.|..+..
T Consensus 324 fGe~all~~~~r~~tv~A~~~~~ll~i~~~~f~~ll~ 360 (381)
T 4din_B 324 FGEIALLLNRPRAATVVARGPLKCVKLDRPRFERVLG 360 (381)
T ss_dssp ECTTGGGSCCBCSSEEEESSCBEEEEEEHHHHHHHHC
T ss_pred echHHHhCCCCceeEEEEcCCEEEEEEeHHHHHHHHh
Confidence 9999 8889999999999999999999999887766
No 43
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=99.48 E-value=7.7e-14 Score=137.27 Aligned_cols=111 Identities=21% Similarity=0.372 Sum_probs=98.9
Q ss_pred HHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEeccccc------ccCCcceEEe
Q 040957 7 IEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQA------EEEDRPEFQL 80 (430)
Q Consensus 7 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~------g~~~~~~~~~ 80 (430)
..+++++++|..++++++..++..+..+.|++|++|+++|+.++++|||++|.|+++ ....+ |++ .++..+
T Consensus 266 ~~~L~~v~lf~~Ls~~el~~L~~~l~~~~~~~Ge~I~~eGd~~~~~yiI~sG~v~v~--~~~~~~~~~~~g~~-~~l~~l 342 (416)
T 3tnp_B 266 ESFIESLPFLKSLEVSERLKVVDVIGTKVYNDGEQIIAQGDLADSFFIVESGEVKIT--MKRKGKSEVEENGA-VEIARC 342 (416)
T ss_dssp SSSGGGCGGGTTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEEEEEEEE--CC-------------CEEEEE
T ss_pred HHHHhhchHhhcCCHHHHHHHHhhceEEEECCCCEEEeCCCcCCEEEEEEeCEEEEE--EecCCcccccCCce-eEEEEe
Confidence 356788999999999999999999999999999999999999999999999999999 66544 555 889999
Q ss_pred ccCCeeccC--CCCCcceeeEEEecceEEEEecccccccccc
Q 040957 81 KRYDYFGHG--SPTIFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 81 ~~G~~fGe~--~~~~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
.+|++||+. +.+.++.++++|+++|.|+.|+++.|..|..
T Consensus 343 ~~G~~fGE~all~~~~r~~tv~A~~~~~ll~I~~~~f~~ll~ 384 (416)
T 3tnp_B 343 FRGQYFGELALVTNKPRAASAHAIGTVKCLAMDVQAFERLLG 384 (416)
T ss_dssp CTTCEESGGGGTCCSCCSSEEEEEEEEEEEEEEHHHHHHHHC
T ss_pred CCCCEecHHHHhCCCCceeEEEEcCCeEEEEEEHHHHHHHhc
Confidence 999999999 8899999999999999999999999887766
No 44
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=99.48 E-value=5e-14 Score=128.89 Aligned_cols=116 Identities=14% Similarity=0.165 Sum_probs=96.9
Q ss_pred CChhHHHH-HhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEE
Q 040957 1 MDPDEVIE-FLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQ 79 (430)
Q Consensus 1 M~~~~~~~-~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~ 79 (430)
|+.+.+.. ++..+..+..|+++++..+...+..+.|++|++|+.+|++++++|+|++|.|+++ ..+.+|++ .++.+
T Consensus 1 ms~~~m~~~~~~~~~p~~~l~~~~l~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~--~~~~~G~~-~~~~~ 77 (250)
T 3e6c_C 1 MSVEGLGKDFCGAIIPDNFFPIEKLRNYTQMGLIRDFAKGSAVIMPGEEITSMIFLVEGKIKLD--IIFEDGSE-KLLYY 77 (250)
T ss_dssp --------CCCCCSSSBSCSCCGGGGGGGGGSEEEEECTTCEEECTTCCCCSEEEEEESCEEEE--EECTTSCE-EEEEE
T ss_pred CCccccchhhhhhccchhhCCHHHHHHHHhhCeEEEECCCCEEECCCCCCCeEEEEEeeEEEEE--EECCCCCE-EEEEE
Confidence 55555543 4455555689999999999999999999999999999999999999999999999 77778877 89999
Q ss_pred eccCCeeccCCCCCcceeeEEEecceEEEEecccccccccc
Q 040957 80 LKRYDYFGHGSPTIFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 80 ~~~G~~fGe~~~~~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
+.+|++||+.+.+. +.++++|+++|+++.|+++.|..+..
T Consensus 78 ~~~G~~~G~~l~~~-~~~~~~A~~~~~v~~i~~~~~~~l~~ 117 (250)
T 3e6c_C 78 AGGNSLIGKLYPTG-NNIYATAMEPTRTCWFSEKSLRTVFR 117 (250)
T ss_dssp ECTTCEECCCSCCS-CCEEEEESSSEEEEEECHHHHHHHHH
T ss_pred ecCCCEEeeecCCC-CceEEEEcccEEEEEEcHHHHHHHHH
Confidence 99999999974455 89999999999999999999877654
No 45
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=99.47 E-value=6.4e-14 Score=127.53 Aligned_cols=108 Identities=30% Similarity=0.392 Sum_probs=98.5
Q ss_pred HHHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCe
Q 040957 6 VIEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDY 85 (430)
Q Consensus 6 ~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~ 85 (430)
+..+++++++|..++++++..++..+..+.|++|++|+++|+.++++|+|.+|.++++ ... . .++..+.+|++
T Consensus 123 ~~~~l~~~~~f~~l~~~~l~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~I~~G~v~v~--~~~----~-~~~~~l~~g~~ 195 (246)
T 3of1_A 123 YDDLLKSMPVLKSLTTYDRAKLADALDTKIYQPGETIIREGDQGENFYLIEYGAVDVS--KKG----Q-GVINKLKDHDY 195 (246)
T ss_dssp SHHHHHHCGGGTTCCHHHHHHHHHTCEEEEECTTCEEECTTSBCCEEEEEEECEEEEE--ETT----T-EEEEEEETTCE
T ss_pred HHHHHhhChhhhcCCHHHHHHHHHhhheEEeCCCCEEEeCCCcCCEEEEEEecEEEEE--EcC----C-ceEEEcCCCCc
Confidence 3567888999999999999999999999999999999999999999999999999999 542 1 27889999999
Q ss_pred eccC--CCCCcceeeEEEecceEEEEecccccccccc
Q 040957 86 FGHG--SPTIFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 86 fGe~--~~~~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
||+. +.+.++.++++|.++|.++.|+++.|..+..
T Consensus 196 fGe~~~~~~~~~~~~v~a~~~~~~~~i~~~~f~~ll~ 232 (246)
T 3of1_A 196 FGEVALLNDLPRQATVTATKRTKVATLGKSGFQRLLG 232 (246)
T ss_dssp ECHHHHHHTCBCSSEEEESSCEEEEEEEHHHHHHHCT
T ss_pred ccHHHHhCCCCcccEEEECCCEEEEEEeHHHHHHHhc
Confidence 9999 7899999999999999999999999887765
No 46
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=99.47 E-value=3.9e-14 Score=126.41 Aligned_cols=106 Identities=18% Similarity=0.120 Sum_probs=88.8
Q ss_pred CCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccC--
Q 040957 12 CVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHG-- 89 (430)
Q Consensus 12 ~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~-- 89 (430)
.-|.|+..++.++..+...+..+.|++|++|+.+|+.++++|||++|.++++ ..+.+|++ .++.++.+|++||+.
T Consensus 3 ~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~v~~G~v~~~--~~~~~G~~-~~~~~~~~G~~~G~~~~ 79 (213)
T 1o5l_A 3 SDKIHHHHHHMDLKKLLPCGKVIVFRKGEIVKHQDDPIEDVLILLEGTLKTE--HVSENGKT-LEIDEIKPVQIIASGFI 79 (213)
T ss_dssp ----------CCGGGGGGGSEEEEECTTCEEECTTCBCCEEEEEEESCEEEE--EECTTSCE-EEEEEECSSEESSGGGT
T ss_pred ccccchhhccCCHHHHhcccEEEEECCCCEEEcCCCccceEEEEEeeEEEEE--EECCCCCE-EEEEEecCCCEeeeHHH
Confidence 3578889999999999999999999999999999999999999999999999 77777777 899999999999999
Q ss_pred CCCC-cceeeEEEecceEEEEecccccccccc
Q 040957 90 SPTI-FRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 90 ~~~~-~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
+.+. ++.++++|+++|+++.|+++.|..+..
T Consensus 80 ~~~~~~~~~~~~A~~~~~v~~i~~~~~~~l~~ 111 (213)
T 1o5l_A 80 FSSEPRFPVNVVAGENSKILSIPKEVFLDLLM 111 (213)
T ss_dssp TSSSCBCSSEEEESSSEEEEEEEHHHHHHHHH
T ss_pred hcCCCCceEEEEEccceEEEEEeHHHHHHHHH
Confidence 5555 899999999999999999998876654
No 47
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=99.46 E-value=1.2e-13 Score=129.36 Aligned_cols=108 Identities=19% Similarity=0.197 Sum_probs=99.9
Q ss_pred HHHHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCC
Q 040957 5 EVIEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYD 84 (430)
Q Consensus 5 ~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~ 84 (430)
.+.++|+++++|..|+++++..++..+..+.|++|++|+++|+.++++|+|++|.++++ . +| ..+..+.+|+
T Consensus 36 ~i~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~G~~~~~~y~i~~G~v~~~--~---~g---~~~~~l~~G~ 107 (291)
T 2qcs_B 36 ALAKAIEKNVLFSHLDDNERSDIFDAMFPVSFIAGETVIQQGDEGDNFYVIDQGEMDVY--V---NN---EWATSVGEGG 107 (291)
T ss_dssp HHHHHTTTCHHHHTSCHHHHHHHHHHCEEEEECTTCEEECTTSBCCEEEEEEECCEEEE--E---TT---EEEEEECTTC
T ss_pred HHHHHHhcChhhhhCCHHHHHHHHHhccEEEECCCCEEEeCCCCCceEEEEeeeEEEEE--E---CC---eEEEEcCCCC
Confidence 56788999999999999999999999999999999999999999999999999999999 4 22 4688999999
Q ss_pred eeccC--CCCCcceeeEEEecceEEEEecccccccccc
Q 040957 85 YFGHG--SPTIFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 85 ~fGe~--~~~~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
+||+. +.+.++.++++|.++|.++.|+++.|..+..
T Consensus 108 ~fGe~~l~~~~~~~~tv~a~~~~~~~~i~~~~~~~~~~ 145 (291)
T 2qcs_B 108 SFGELALIYGTPRAATVKAKTNVKLWGIDRDSYRRILM 145 (291)
T ss_dssp EECGGGGTCCCBCSSEEEESSCEEEEEEEHHHHHHHHH
T ss_pred ccchHHHhcCCCCceEEEECCCEEEEEEEhHHHHHHHh
Confidence 99999 7888999999999999999999999887765
No 48
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=99.45 E-value=9.2e-14 Score=135.25 Aligned_cols=108 Identities=19% Similarity=0.184 Sum_probs=99.9
Q ss_pred HHHHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCC
Q 040957 5 EVIEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYD 84 (430)
Q Consensus 5 ~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~ 84 (430)
.+.++|+++++|..|+++++..|+..+..+.|++|++|+++|+.++++|+|++|.|+++ .. | ..+..+.+|+
T Consensus 127 ~i~~~l~~~~lF~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~--~~---~---~~v~~l~~G~ 198 (381)
T 4din_B 127 ALAKAISKNVLFAHLDDNERSDIFDAMFPVTHIAGETVIQQGNEGDNFYVVDQGEVDVY--VN---G---EWVTNISEGG 198 (381)
T ss_dssp HHHHHHTTCTTSSSCCHHHHHHHHHHCEEEECCTTCBSSCTTSBCCEEEECSSSEEEEE--ET---T---EEEEEEESSC
T ss_pred HHHHHHhCChhhhcCCHHHHHHHHHhceEEEECCCCEEEeCCCCCCeEEEEEeeEEEEE--EC---C---eEeeeCCCCC
Confidence 46789999999999999999999999999999999999999999999999999999999 42 2 3677899999
Q ss_pred eeccC--CCCCcceeeEEEecceEEEEecccccccccc
Q 040957 85 YFGHG--SPTIFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 85 ~fGe~--~~~~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
+||+. +.+.++.++++|.++|.++.|+++.|+.+..
T Consensus 199 ~fGe~all~~~~r~atv~A~~~~~l~~i~~~~f~~ll~ 236 (381)
T 4din_B 199 SFGELALIYGTPRAATVKAKTDLKLWGIDRDSYRRILM 236 (381)
T ss_dssp CBCGGGGTSCCBCSSEEEESSSCEEEEEEHHHHHHHHH
T ss_pred EEEchHHhcCCCcceEEEECCCEEEEEEchHHHHHhhh
Confidence 99999 8899999999999999999999999887765
No 49
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=99.43 E-value=4.8e-14 Score=126.38 Aligned_cols=105 Identities=15% Similarity=0.108 Sum_probs=95.7
Q ss_pred HHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCee
Q 040957 7 IEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYF 86 (430)
Q Consensus 7 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~f 86 (430)
..+|+++++|..|+++++..++..+..+.|++|++|+.+|++++++|+|++|.++++ . +.+|++ .++.++.+|++|
T Consensus 3 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~-~~~G~~-~~~~~~~~G~~~ 78 (220)
T 2fmy_A 3 QMRLTDTNLLEVLNSEEYSGVLKEFREQRYSKKAILYTPNTERNLVFLVKSGRVRVY--L-AYEDKE-FTLAILEAGDIF 78 (220)
T ss_dssp TTCSCSSCHHHHTTSGGGTTTGGGSEEEEECTTCEEECTTCSSCEEEEEEESEEEEE--E-ECSSCE-EEEEEEETTCEE
T ss_pred hhhhhcChhhhcCCHHHHHHHHHhhheeEeCCCCEEECCCCCCCeEEEEEecEEEEE--E-CCCCCE-EEEEEcCCCCEe
Confidence 357889999999999999999999999999999999999999999999999999996 3 336666 899999999999
Q ss_pred ccCCCCCcceeeEEEecceEEEEecccccccccc
Q 040957 87 GHGSPTIFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 87 Ge~~~~~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
|+ ++.++++|+++|+++.|+++.|..+..
T Consensus 79 G~-----~~~~~~~A~~~~~v~~i~~~~~~~l~~ 107 (220)
T 2fmy_A 79 CT-----HTRAFIQAMEDTTILYTDIRNFQNIVV 107 (220)
T ss_dssp ES-----CSSSEEEESSSEEEEEEEHHHHHHHHH
T ss_pred CC-----ccceEEEEcCcEEEEEEeHHHHHHHHH
Confidence 99 788999999999999999998876654
No 50
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=99.41 E-value=7.2e-13 Score=144.53 Aligned_cols=115 Identities=20% Similarity=0.246 Sum_probs=103.1
Q ss_pred HHHHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCC
Q 040957 5 EVIEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYD 84 (430)
Q Consensus 5 ~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~ 84 (430)
.+...|+++.+|+.|++.++..|+.++..+.|++|++||++||.++++|+|++|.|.+++...+.++.+ .++..+.+|+
T Consensus 39 ~I~~~Lk~~~~f~~l~~~~l~~l~~~m~ye~~~~Ge~IfrqGd~gd~fYIIlsGsV~V~i~~~~~~~~~-~~v~~l~~G~ 117 (999)
T 4f7z_A 39 IIFTRLKGVKAFEKFHPNLLRQICLCGYYENLEKGITLFRQGDIGTNWYAVLAGSLDVKVSETSSHQDA-VTICTLGIGT 117 (999)
T ss_dssp HHHHHHTTCTTTTTCCHHHHHHHHHHCEEEEECTTCEEECTTSCCCEEEEEEESEEEEEECSSSCTTSC-EEEEEEETTC
T ss_pred HHHHHHhCCHhhhcCCHHHHHHHHhheEEEEECCCCEEEcCCCcCCEEEEEEeeEEEEEEecCCCCCCc-eeEEEecCCc
Confidence 467789999999999999999999999999999999999999999999999999999994333333334 7888999999
Q ss_pred eeccC-CCCCcceeeEEEecceEEEEecccccccccc
Q 040957 85 YFGHG-SPTIFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 85 ~fGe~-~~~~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
.||+. +.+.+|.++++|.++|+++.|++++|+.+..
T Consensus 118 sFGEall~n~pRtaTv~a~~~s~l~~l~r~~F~~i~~ 154 (999)
T 4f7z_A 118 AFGESILDNTPRHATIVTRESSELLRIEQEDFKALWE 154 (999)
T ss_dssp EECGGGGGTCCCSSEEEESSSEEEEEEEHHHHHHHHH
T ss_pred chhhhhccCCCcceEEEeccceEEEEEEHHHHHHHHH
Confidence 99999 9999999999999999999999999876643
No 51
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=99.40 E-value=9.7e-14 Score=124.58 Aligned_cols=103 Identities=17% Similarity=0.064 Sum_probs=93.4
Q ss_pred HhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeecc
Q 040957 9 FLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGH 88 (430)
Q Consensus 9 ~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe 88 (430)
+|+++++|..|+++++..++..+..+.|++|++|+.+|++++++|+|++|.|+++ . +.+|++ .++.++.+|++||
T Consensus 1 ~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~-~~~G~~-~~~~~~~~G~~fG- 75 (222)
T 1ft9_A 1 MPPRFNIANVLLSPDGETFFRGFRSKIHAKGSLVCTGEGDENGVFVVVDGRLRVY--L-VGEERE-ISLFYLTSGDMFC- 75 (222)
T ss_dssp -CCCCCTHHHHTSTTTTTTTTTCEEEEECTTCEEECTTCCCCCEEEEEESEEEEE--E-EETTEE-EEEEEEETTCEEE-
T ss_pred CcccchhhhcCCHHHHHHHHhhCcEEEECCCCEEECCCCCCCeEEEEEecEEEEE--E-CCCCCE-EEEEEcCCCCEec-
Confidence 4788999999999999999999999999999999999999999999999999997 3 235666 8999999999999
Q ss_pred CCCCCcceeeEEEecceEEEEecccccccccc
Q 040957 89 GSPTIFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 89 ~~~~~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
.++.++++|+++|+++.|+++.|..+..
T Consensus 76 ----~~~~~~~~A~~~~~v~~i~~~~~~~l~~ 103 (222)
T 1ft9_A 76 ----MHSGCLVEATERTEVRFADIRTFEQKLQ 103 (222)
T ss_dssp ----SCSSCEEEESSCEEEEEECHHHHHHHHH
T ss_pred ----CCCCEEEEEccceEEEEEeHHHHHHHHH
Confidence 5788999999999999999999877654
No 52
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=99.39 E-value=9.7e-13 Score=131.66 Aligned_cols=109 Identities=18% Similarity=0.231 Sum_probs=98.6
Q ss_pred HHHHHhcCCCCCCCCCHHHHHHHHhhceE-EEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccC
Q 040957 5 EVIEFLSCVPLLQRLPGSSLKRIADIVIV-KRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRY 83 (430)
Q Consensus 5 ~~~~~l~~~~~f~~l~~~~~~~l~~~~~~-~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G 83 (430)
.+.++|+++++|..|+++++..++..+.. +.|++|++|+++|+.++++|||++|.|+++ .. + + .++..+.+|
T Consensus 334 ~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~~g~~i~~~G~~~~~~yiI~~G~v~v~--~~---~-~-~~~~~l~~G 406 (469)
T 1o7f_A 334 IIYDELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVV--IY---G-K-GVVCTLHEG 406 (469)
T ss_dssp HHHHHHTTCGGGTTSCHHHHHHHHHHCEEEEECSTTCEEECTTSCCCEEEEEEESEEEEE--ET---T-T-EEEEEEETT
T ss_pred HHHHHHhcCHhhhhCCHHHHHHHHHHhheeeEecCCCEEEeCCCcCCeEEEEEEeEEEEE--Ec---C-C-eeEEEecCC
Confidence 45788999999999999999999999985 599999999999999999999999999999 43 2 2 378899999
Q ss_pred CeeccC--CCCCcceeeEEEec-ceEEEEecccccccccc
Q 040957 84 DYFGHG--SPTIFRQGDVIALT-ELTCLVLPHEHCNWLET 120 (430)
Q Consensus 84 ~~fGe~--~~~~~~~~~v~A~~-~~~~l~i~~~~f~~l~~ 120 (430)
++||+. +.+.++.++++|++ +|.++.|+++.|..+..
T Consensus 407 ~~fGe~~ll~~~~~~~tv~a~~~~~~~~~i~~~~f~~ll~ 446 (469)
T 1o7f_A 407 DDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILR 446 (469)
T ss_dssp CEECGGGGTCCSCCSSEEEESSSSEEEEEEEHHHHHHHHH
T ss_pred CEEEEehhhcCCCceEEEEEecCCEEEEEEcHHHHHHHHH
Confidence 999999 78889999999999 69999999999887766
No 53
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=99.33 E-value=2.2e-12 Score=117.08 Aligned_cols=100 Identities=12% Similarity=0.088 Sum_probs=86.1
Q ss_pred CCCCHHHHHHHHh--hceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccC--CCC
Q 040957 17 QRLPGSSLKRIAD--IVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHG--SPT 92 (430)
Q Consensus 17 ~~l~~~~~~~l~~--~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~--~~~ 92 (430)
++++++++..+.. .+..++|++|++|+.+|++++++|||++|.|+++ ..+.+|++ .++.++ +|++||+. +.+
T Consensus 2 ~~l~~~~l~~ll~~~~~~~~~~~~ge~i~~~G~~~~~~y~I~~G~v~~~--~~~~~G~e-~~~~~~-~G~~~Ge~~~~~~ 77 (238)
T 2bgc_A 2 SNAQAEEFKKYLETNGIKPKQFHKKELIFNQWDPQEYCIFLYDGITKLT--SISENGTI-MNLQYY-KGAFVIMSGFIDT 77 (238)
T ss_dssp --CHHHHHHHHHHHTTCCCEEEETTCEEECTTCCCCEEEEEEESEEEEE--EECTTSCE-EEEEEE-ESSEEEESBCTTT
T ss_pred CCCCHHHHHHHHHhCCceEEEECCCCEEEeCCCCCceEEEEEecEEEEE--EECCCCCE-EEEEEc-CCCEecchhhhcC
Confidence 4688999999885 5899999999999999999999999999999999 77777777 888999 99999999 666
Q ss_pred Ccc--eeeEEEe-cceEEEEecccccccccc
Q 040957 93 IFR--QGDVIAL-TELTCLVLPHEHCNWLET 120 (430)
Q Consensus 93 ~~~--~~~v~A~-~~~~~l~i~~~~f~~l~~ 120 (430)
.++ ..+++|+ ++|+++.|+++.|..+..
T Consensus 78 ~~~~~~~~~~a~~~~~~v~~i~~~~~~~l~~ 108 (238)
T 2bgc_A 78 ETSVGYYNLEVISEQATAYVIKINELKELLS 108 (238)
T ss_dssp CCBSCCCEEEECSSEEEEEEEEHHHHHHHHH
T ss_pred CCcCcceeEEEEEcceEEEEEeHHHHHHHHH
Confidence 653 6778888 599999999998876654
No 54
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=99.31 E-value=2.6e-12 Score=116.99 Aligned_cols=97 Identities=22% Similarity=0.280 Sum_probs=86.6
Q ss_pred HHHHHHHHhhce---EEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccC--CCCCc-
Q 040957 21 GSSLKRIADIVI---VKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHG--SPTIF- 94 (430)
Q Consensus 21 ~~~~~~l~~~~~---~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~--~~~~~- 94 (430)
++++..|...+. .+.|++|++|+.+|+.++++|||++|.|+++ ..+.+|++ .++.++.+|++||+. +.+.+
T Consensus 30 ~~~l~~L~~~~~~~~~~~~~~ge~i~~~G~~~~~ly~v~~G~v~~~--~~~~~G~~-~~l~~~~~g~~~G~~~~~~~~~~ 106 (243)
T 3la7_A 30 ANVFRQMATGAFPPVVETFERNKTIFFPGDPAERVYFLLKGAVKLS--RVYEAGEE-ITVALLRENSVFGVLSLLTGNKS 106 (243)
T ss_dssp HHHHHHHCCSSCCCEEEEECTTCEEECTTSBCCEEEEEEESCEEEE--EECTTCCE-EEEEEECTTCEESCHHHHSSCCS
T ss_pred HHHHHHHhhccchheeEEECCCCEEEcCCCCCceEEEEEeCEEEEE--EECCCCCE-EEEEEecCCCEEcchHHhCCCCC
Confidence 667888888888 9999999999999999999999999999999 77777777 899999999999998 56655
Q ss_pred -ceeeEEEecceEEEEecccccccccc
Q 040957 95 -RQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 95 -~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
+.++++|+++|+++.|+++.|..+..
T Consensus 107 ~~~~~~~A~~~~~v~~i~~~~~~~l~~ 133 (243)
T 3la7_A 107 DRFYHAVAFTPVELLSAPIEQVEQALK 133 (243)
T ss_dssp BCCEEEEESSSEEEEEEEHHHHHHHHT
T ss_pred cceEEEEEccceEEEEEcHHHHHHHHH
Confidence 55899999999999999998876654
No 55
>3cf6_E RAP guanine nucleotide exchange factor (GEF) 4; EPAC, rapgef4, CAMP, SP-camps, GEF, gunanine nucleotide exchange factor, G-protein, GTP-binding, nucleotide-binding; HET: SP1; 2.20A {Mus musculus}
Probab=99.30 E-value=4e-12 Score=132.23 Aligned_cols=109 Identities=18% Similarity=0.225 Sum_probs=98.9
Q ss_pred HHHHHhcCCCCCCCCCHHHHHHHHhhce-EEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccC
Q 040957 5 EVIEFLSCVPLLQRLPGSSLKRIADIVI-VKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRY 83 (430)
Q Consensus 5 ~~~~~l~~~~~f~~l~~~~~~~l~~~~~-~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G 83 (430)
.+.++|+++++|..|+++++..++..+. .+.|++|++|+++|+.++++|||++|.|+++ .. | + .++.++.+|
T Consensus 29 ~l~~~L~~~~lF~~Ls~~~l~~L~~~~~~~~~~~kGe~I~~eGd~~~~lyiIlsG~V~v~--~~---g-~-~il~~l~~G 101 (694)
T 3cf6_E 29 IIYDELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVV--IY---G-K-GVVCTLHEG 101 (694)
T ss_dssp HHHHHHTTCGGGTTSCHHHHHHHHTTCEEEEECSTTCEEECTTSBCCEEEEEEESEEEEE--ET---T-T-EEEEEEETT
T ss_pred HHHHHHHcChhhccCCHHHHHHHHHhcceEEEECCCCEEECCCCcCCeEEEEEEEEEEEE--Ee---C-C-EEEEEeCCC
Confidence 4678899999999999999999999998 7899999999999999999999999999999 54 2 2 588999999
Q ss_pred CeeccC--CCCCcceeeEEEec-ceEEEEecccccccccc
Q 040957 84 DYFGHG--SPTIFRQGDVIALT-ELTCLVLPHEHCNWLET 120 (430)
Q Consensus 84 ~~fGe~--~~~~~~~~~v~A~~-~~~~l~i~~~~f~~l~~ 120 (430)
++||+. +.+.++.++++|++ +|+++.|++++|..+..
T Consensus 102 d~fGe~al~~~~~~~~tv~A~edd~~ll~I~~~~f~~ll~ 141 (694)
T 3cf6_E 102 DDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILR 141 (694)
T ss_dssp CEECHHHHHHTCBCSSEEEECSSSEEEEEEEHHHHHHHTT
T ss_pred CEeehHHHhCCCCceEEEEEeeCceEEEEEeHHHHHHHHH
Confidence 999999 77889999999999 59999999998876655
No 56
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=99.28 E-value=7.9e-12 Score=109.64 Aligned_cols=80 Identities=20% Similarity=0.187 Sum_probs=75.0
Q ss_pred EEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccC-CCCCcceeeEEEecceEEEEecc
Q 040957 34 KRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHG-SPTIFRQGDVIALTELTCLVLPH 112 (430)
Q Consensus 34 ~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~-~~~~~~~~~v~A~~~~~~l~i~~ 112 (430)
++|++|++|+++|++++++|+|++|.++++ ..+.+|++ .++.++.+|++||+. +.+.++.++++|+++|+++.|++
T Consensus 2 ~~~~~g~~i~~~g~~~~~~y~i~~G~v~~~--~~~~~g~~-~~~~~~~~G~~~Ge~~~~~~~~~~~~~A~~~~~v~~i~~ 78 (195)
T 3b02_A 2 KRFARKETIYLRGEEARTLYRLEEGLVRVV--ELLPDGRL-ITLRHVLPGDYFGEEALEGKAYRYTAEAMTEAVVQGLEP 78 (195)
T ss_dssp EEECTTCEEECTTSBCCCEEEEEESCEEEE--EECTTSCE-EEEEEECTTCEECGGGGTCSBCSSEEEESSSEEEEEECG
T ss_pred eEcCCCCEEECCCCCCCeEEEEEeCEEEEE--EECCCCCE-EEEEEecCCCEechhhhCCCCceeEEEECCcEEEEEEcH
Confidence 689999999999999999999999999999 76667777 899999999999998 88889999999999999999999
Q ss_pred cccc
Q 040957 113 EHCN 116 (430)
Q Consensus 113 ~~f~ 116 (430)
+.|.
T Consensus 79 ~~~~ 82 (195)
T 3b02_A 79 RAMD 82 (195)
T ss_dssp GGCC
T ss_pred HHcC
Confidence 9887
No 57
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=99.27 E-value=9.6e-12 Score=135.66 Aligned_cols=109 Identities=18% Similarity=0.237 Sum_probs=96.8
Q ss_pred HHHHHhcCCCCCCCCCHHHHHHHHhhceEE-EecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccC
Q 040957 5 EVIEFLSCVPLLQRLPGSSLKRIADIVIVK-RYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRY 83 (430)
Q Consensus 5 ~~~~~l~~~~~f~~l~~~~~~~l~~~~~~~-~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G 83 (430)
.+.++|.+++.|..|+...+..|+..+... ++++|++|+++||.++.+|||++|.|.++ +. ++ ..+..+++|
T Consensus 334 ~l~e~L~~i~~f~~Ls~~v~r~L~~~l~~~~~~kaGtvI~rQGE~gds~YIIlsG~V~V~--~~----~~-~~v~~L~~G 406 (999)
T 4f7z_A 334 IIYDELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQGEEGTSWYIILKGSVNVV--IY----GK-GVVCTLHEG 406 (999)
T ss_dssp HHHHHHTTCGGGTTSCHHHHHHHTTTCEEEEESSTTCEEECTTSBCCEEEEEEESEEEEE--ET----TT-EEEEEEETT
T ss_pred HHHHHHHhhHHHhcCCHHHHHHHHHhhhhheeccCCCEEEeCCCcCCeEEEEEeeEEEEE--Ec----CC-cceEEecCC
Confidence 456789999999999999999999999865 55889999999999999999999999999 42 22 467889999
Q ss_pred CeeccC--CCCCcceeeEEEecc-eEEEEecccccccccc
Q 040957 84 DYFGHG--SPTIFRQGDVIALTE-LTCLVLPHEHCNWLET 120 (430)
Q Consensus 84 ~~fGe~--~~~~~~~~~v~A~~~-~~~l~i~~~~f~~l~~ 120 (430)
|+||+. +.+.||.++|+|.++ |.+++|++++|..+..
T Consensus 407 d~FGElALL~~~PR~aTV~a~~d~c~fl~i~k~df~~il~ 446 (999)
T 4f7z_A 407 DDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDGNRILR 446 (999)
T ss_dssp CEECGGGGTCSCBCSSEEEESSSSEEEEEEEHHHHHHHHH
T ss_pred CcccchhhccCCCeeEEEEEecCceEEEEeeHHHHHHHHh
Confidence 999999 899999999999985 9999999998876644
No 58
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=99.22 E-value=1.2e-11 Score=109.16 Aligned_cols=86 Identities=15% Similarity=0.133 Sum_probs=75.7
Q ss_pred HHhhceEEEecCCCEEEeCCCcC--CeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccC-CCCCcceeeEEEec
Q 040957 27 IADIVIVKRYGKGEYVVRDGDIG--EGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHG-SPTIFRQGDVIALT 103 (430)
Q Consensus 27 l~~~~~~~~~~~ge~i~~~g~~~--~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~-~~~~~~~~~v~A~~ 103 (430)
|...++.+.|++|++|+.+|+++ +++|+|++|.++++ ..+.+|++ .++.++.+|++||+. +.+.++.++++|++
T Consensus 1 l~~~~~~~~~~~g~~i~~~g~~~~~~~~y~v~~G~v~~~--~~~~~G~~-~~~~~~~~g~~~G~~~l~~~~~~~~~~A~~ 77 (202)
T 2zcw_A 1 MTQVRETVSFKAGDVILYPGVPGPRDRAYRVLEGLVRLE--AVDEEGNA-LTLRLVRPGGFFGEEALFGQERIYFAEAAT 77 (202)
T ss_dssp -----CCEEECTTCEEECSBSCCTTCCCEEEEESCEEEE--EECTTSCE-EEEEEECTTCEECTHHHHTCCBCSEEEESS
T ss_pred CCccceEEEECCCCEEECCCCCCCCCeEEEEEeCEEEEE--EECCCCcE-EEEEEecCCCEeeehhcCCCCcceEEEEcc
Confidence 34567889999999999999999 99999999999999 77777777 899999999999998 77889999999999
Q ss_pred ceEEEEecccccc
Q 040957 104 ELTCLVLPHEHCN 116 (430)
Q Consensus 104 ~~~~l~i~~~~f~ 116 (430)
+|+++.| ++.|.
T Consensus 78 ~~~v~~i-~~~~~ 89 (202)
T 2zcw_A 78 DVRLEPL-PENPD 89 (202)
T ss_dssp CEEEEEC-CSSCC
T ss_pred cEEEEEE-hHhcC
Confidence 9999999 88876
No 59
>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A*
Probab=99.18 E-value=2.4e-12 Score=124.08 Aligned_cols=104 Identities=24% Similarity=0.359 Sum_probs=0.9
Q ss_pred HHHhcCCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCee
Q 040957 7 IEFLSCVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYF 86 (430)
Q Consensus 7 ~~~l~~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~f 86 (430)
.+.++++++|+++++++++.+...++.+.|++||.|+++||+++++|+|.+|.++++ ..+ + ..+++|++|
T Consensus 227 ~~~l~~~~lf~~ls~~~l~~l~~~~~~~~~~~ge~I~~~G~~~~~ly~I~~G~v~v~--~~~----~----~~l~~G~~f 296 (355)
T 3beh_A 227 WQLVAAVPLFQKLGPAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVA--TPN----P----VELGPGAFF 296 (355)
T ss_dssp HC------------------------------------------------------------------------------
T ss_pred chhhhcccccccCCHHHHHHHHHhceEEEECCCCEEEeCCCcCceEEEEEeeEEEEE--ECC----e----eEECCCCEE
Confidence 357889999999999999999999999999999999999999999999999999999 442 2 478999999
Q ss_pred ccC--CCCCcceeeEEEecceEEEEecccccccccc
Q 040957 87 GHG--SPTIFRQGDVIALTELTCLVLPHEHCNWLET 120 (430)
Q Consensus 87 Ge~--~~~~~~~~~v~A~~~~~~l~i~~~~f~~l~~ 120 (430)
|+. +.+.++.++++|.++|+++.|++++|+.+.+
T Consensus 297 Ge~~~l~~~~~~~~~~A~~~~~l~~i~~~~f~~ll~ 332 (355)
T 3beh_A 297 GEMALISGEPRSATVSAATTVSLLSLHSADFQMLCS 332 (355)
T ss_dssp ------------------------------------
T ss_pred eehHHhCCCCcceEEEECccEEEEEEeHHHHHHHHH
Confidence 999 7888999999999999999999999887765
No 60
>3f1t_A Uncharacterized protein Q9I3C8_pseae; PAR319A, NESG, structural genomics, PSI-2, Pro structure initiative; HET: MSE; 2.20A {Pseudomonas aeruginosa}
Probab=98.35 E-value=1.8e-06 Score=71.63 Aligned_cols=81 Identities=15% Similarity=0.095 Sum_probs=67.1
Q ss_pred CceeehhHHHHHHHHHHhc----cCC--CCCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEEC--CeeEE
Q 040957 161 FGKVFGGQLVGQALAAASK----TVD--CLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQK--GNIIF 232 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~----~~~--~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~--g~~~~ 232 (430)
.+.+|||.+++++=.|+.. ..+ ......++++.|++|+.++.++..+.+.+|.||+....+++++++ |+++.
T Consensus 51 ~G~vHGG~latl~D~a~g~a~~~~~~~~~~~vT~~l~v~flrp~~~G~~l~a~a~v~~~gr~~~~~~~~i~~~~~g~lvA 130 (148)
T 3f1t_A 51 SGVVHGGAITTLMDTTCGISTVCVLPDFEICPTLDLRIDYMHPAEPHKDVYGFAECYRVTPNVIFTRGFAYQDDPGQPIA 130 (148)
T ss_dssp SCCBCHHHHHHHHHHHHHHHGGGTCSSCCCCCEEEEEEEECSCCCTTSCEEEEEEEEEECSSEEEEEEEEESSCTTSCSE
T ss_pred CCcCcHHHHHHHHHHHHHHHHHHhCCCCCceEEEEEEEEEecCCCCCCEEEEEEEEEeccCcEEEEEEEEEECCCCcEEE
Confidence 5689999999987544432 222 233466789999999998779999999999999999999999998 89999
Q ss_pred EEEEecccc
Q 040957 233 TLLASFQKE 241 (430)
Q Consensus 233 ~~~~sf~~~ 241 (430)
.++++|...
T Consensus 131 ~a~~t~~~~ 139 (148)
T 3f1t_A 131 HVVGAFMRM 139 (148)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEEec
Confidence 999999765
No 61
>3e29_A Uncharacterized protein Q7WE92_borbr; Q7WE92 NESG, structural genomics, PSI-2, Pro structure initiative; 2.40A {Bordetella bronchiseptica} SCOP: d.38.1.0
Probab=98.31 E-value=4.2e-06 Score=69.13 Aligned_cols=80 Identities=18% Similarity=0.175 Sum_probs=67.0
Q ss_pred CceeehhHHHHHHHHHHhc----cCCCCCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEE-CCeeEEEEE
Q 040957 161 FGKVFGGQLVGQALAAASK----TVDCLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQ-KGNIIFTLL 235 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~----~~~~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q-~g~~~~~~~ 235 (430)
.+.+|||.+++++=.|+.. ..+......+++++|++|+..+ ++..+.+.+|.||+....++++++ +|++++.++
T Consensus 50 ~G~~hGG~l~~l~D~a~~~a~~~~~~~~~vt~~l~i~fl~p~~~g-~l~~~a~v~~~gr~~~~~~~~i~~~~g~~va~a~ 128 (144)
T 3e29_A 50 IRSTHGGILATLVDAAGDYAVALKTGHPVPTMDMHVDYHRVATPG-DLRAEGQVIHFGKRFATAHARVLDMDGNLVASGR 128 (144)
T ss_dssp TTCBCHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEEEECSCCCSS-CEEEEEEEEEECSSEEEEEEEEEETTCCEEEEEE
T ss_pred CCeEcHHHHHHHHHHHHHHHHHHcCCCceEEEEEEEEEecCCCCc-EEEEEEEEEEeCCcEEEEEEEEEeCCCCEEEEEE
Confidence 4689999999987544432 2244455788999999999874 799999999999999999999999 799999999
Q ss_pred Eecccc
Q 040957 236 ASFQKE 241 (430)
Q Consensus 236 ~sf~~~ 241 (430)
++|...
T Consensus 129 ~tf~~~ 134 (144)
T 3e29_A 129 ALYLIR 134 (144)
T ss_dssp EEEECC
T ss_pred EEEEEc
Confidence 999765
No 62
>3dkz_A Thioesterase superfamily protein; Q7W9W5, borpa, PF03061, NESG, BPR208C, structural genomics, PSI-2, protein structure initiative; 2.40A {Bordetella parapertussis}
Probab=98.25 E-value=1e-05 Score=66.64 Aligned_cols=79 Identities=16% Similarity=0.222 Sum_probs=66.0
Q ss_pred CceeehhHHHHHHHHHHhccCCC-----CCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEE-CCeeEEEE
Q 040957 161 FGKVFGGQLVGQALAAASKTVDC-----LKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQ-KGNIIFTL 234 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~~~~-----~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q-~g~~~~~~ 234 (430)
.+.+|||.+++++=.|+...+.. .....+++++|++|+. +. +..+.+.++.||+....+++++. +|++++.+
T Consensus 45 ~G~vhGG~l~~l~D~a~~~a~~~~~~~~~~vt~~l~i~fl~p~~-g~-l~~~a~v~~~gr~~~~~~~~v~~~~g~lva~a 122 (142)
T 3dkz_A 45 RGDIHGGTLMSVLDFTLGAAIRGDTPEVGVATIDMNTSFMSPGR-GD-LVIETRCLRRGASIAFCEGEIRDSAGELVAKA 122 (142)
T ss_dssp SSSBCHHHHHHHHHHHHHHTTTTSCTTSCEEEEEEEEEECSCCC-SC-EEEEEEEEEECSSEEEEEEEEEETTCCEEEEE
T ss_pred CCcCHHHHHHHHHHHHHHHHHHhhCCCCceEEEEEEEEEecCCC-Ce-EEEEEEEEEcCCcEEEEEEEEEeCCCCEEEEE
Confidence 45899999999987776654421 2235678999999998 55 99999999999999999999996 79999999
Q ss_pred EEecccc
Q 040957 235 LASFQKE 241 (430)
Q Consensus 235 ~~sf~~~ 241 (430)
+++|...
T Consensus 123 ~~t~~~~ 129 (142)
T 3dkz_A 123 TATFKII 129 (142)
T ss_dssp EEEEEEC
T ss_pred EEEEEEe
Confidence 9999765
No 63
>1sc0_A Hypothetical protein HI1161; structural genomics, unknown function, PSI-2, protein structure initiative; 1.70A {Haemophilus influenzae} SCOP: d.38.1.5 PDB: 2b6e_A 3lz7_A
Probab=98.20 E-value=1.1e-05 Score=66.05 Aligned_cols=97 Identities=12% Similarity=0.105 Sum_probs=69.8
Q ss_pred cCccccceeecccCCC--CC-CCceeehhHHHHHHHHH----HhccCCCCCc--ceeeeeeeccCcCCCCCeEEEEEEee
Q 040957 142 LEPVEVNIFQGITLPD--AP-KFGKVFGGQLVGQALAA----ASKTVDCLKI--VHSLHCYFLLVGDLNIPIIYQVHRVR 212 (430)
Q Consensus 142 l~~~~~~~f~~~~~~~--~~-~~~~~~GG~~~a~al~A----a~~~~~~~~~--~~s~~~~Fl~~~~~~~pi~~~V~~lr 212 (430)
+..++++.-+...+.. .. ..+.+|||.+++++=.| +....+++.. -.+++++|++|+.. +.+..+.+.+|
T Consensus 28 ~~~~~~g~~~~~~~v~~~~~n~~G~~HGG~~~~l~D~a~~~a~~~~~~~~~~~vt~~l~i~flrpa~~-g~l~a~a~v~~ 106 (138)
T 1sc0_A 28 ISAFGEDWIEATMPVDHRTMQPFGVLHGGVSVALAETIGSLAGSLCLEEGKTVVGLDINANHLRPVRS-GKVTARATPIN 106 (138)
T ss_dssp EEEECSSCEEEEEECSTTTBCTTSSBCHHHHHHHHHHHHHHHHHHTSCTTCEEEEEEEEEEECSCCCS-SEEEEEEEEEE
T ss_pred EEEEeCCEEEEEEEcCHHHcCCCCcCcHHHHHHHHHHHHHHHHHHhCCCCceeeeeEEEEEEEccCCC-CcEEEEEEEEE
Confidence 3455566544444332 11 34589999999886332 3334444444 34678999999986 68999999999
Q ss_pred eCCCeeEEEEEEE-ECCeeEEEEEEecc
Q 040957 213 DGNSFATRRVDAI-QKGNIIFTLLASFQ 239 (430)
Q Consensus 213 ~Gr~~s~~~V~~~-Q~g~~~~~~~~sf~ 239 (430)
.||+.+..+++++ ++|++++++++++.
T Consensus 107 ~Gr~~~~~~~~i~d~~g~lvA~a~~T~~ 134 (138)
T 1sc0_A 107 LGRNIQVWQIDIRTEENKLCCVSRLTLS 134 (138)
T ss_dssp ECSSEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred cCCCEEEEEEEEEcCCCCEEEEEEEEEE
Confidence 9999999999999 46899999998874
No 64
>1vh9_A P15, hypothetical protein YBDB; structural genomics, unknown function; 2.15A {Escherichia coli} SCOP: d.38.1.5
Probab=98.20 E-value=7.1e-06 Score=68.14 Aligned_cols=83 Identities=13% Similarity=0.030 Sum_probs=66.1
Q ss_pred CceeehhHHHHHHHHHHhc----cCCCCCc--ceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEE-CCeeEEE
Q 040957 161 FGKVFGGQLVGQALAAASK----TVDCLKI--VHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQ-KGNIIFT 233 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~----~~~~~~~--~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q-~g~~~~~ 233 (430)
.+.+|||.+++++=.|+.. ..+++.. ..+++++|++|+..+ .+..+.+.++.||+....+++++. +|+++++
T Consensus 52 ~G~vhGG~l~~l~D~a~~~a~~~~~~~~~~~vt~~l~i~fl~p~~~G-~l~a~a~v~~~gr~~~~~~~~v~~~~g~lvA~ 130 (149)
T 1vh9_A 52 FGLLHGGASAALAETLGSMAGFMMTRDGQCVVGTELNATHHRPVSEG-KVRGVCQPLHLGRQNQSWEIVVFDEQGRRCCT 130 (149)
T ss_dssp TSSBCHHHHHHHHHHHHHHHHHTTCCTTCCEEEEEEEEEECSCCCSS-EEEEEEEEEEECSSEEEEEEEEECTTSCEEEE
T ss_pred CCcChHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEEEEEEEcCCCCc-EEEEEEEEEECCCCEEEEEEEEEeCCCCEEEE
Confidence 4689999999988555432 3333333 446899999999986 999999999999999999999997 7899999
Q ss_pred EEEeccccCCC
Q 040957 234 LLASFQKEEQG 244 (430)
Q Consensus 234 ~~~sf~~~~~~ 244 (430)
++++|......
T Consensus 131 a~~t~~~~~~~ 141 (149)
T 1vh9_A 131 CRLGTAVLGEG 141 (149)
T ss_dssp EEEEEEECC--
T ss_pred EEEEEEEecCC
Confidence 99999765433
No 65
>3f5o_A Thioesterase superfamily member 2; hotdog fold, hydrolase; HET: UOC COA P6G; 1.70A {Homo sapiens} SCOP: d.38.1.5 PDB: 2f0x_A* 2cy9_A
Probab=98.20 E-value=1.4e-05 Score=66.22 Aligned_cols=81 Identities=15% Similarity=0.214 Sum_probs=65.7
Q ss_pred CceeehhHHHHHHHHHHh---ccCCC--CCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEE--CCeeEEE
Q 040957 161 FGKVFGGQLVGQALAAAS---KTVDC--LKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQ--KGNIIFT 233 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~---~~~~~--~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q--~g~~~~~ 233 (430)
.+.+|||.+++++=.|+. ..... .....+++++|++|+..+.++..+.+.++.||+....+++++. +|++++.
T Consensus 52 ~G~vhGG~l~~l~D~a~~~a~~~~~~~~~~vt~~l~i~fl~p~~~G~~l~~~a~v~~~g~~~~~~~~~i~~~~~g~lva~ 131 (148)
T 3f5o_A 52 IGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQ 131 (148)
T ss_dssp TSBBCHHHHHHHHHHHHHHHHHTSSSCCCCEEEEEEEEECSCCBTTCEEEEEEEEEEECSSEEEEEEEEEETTTCCEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEEeCCCCCCCEEEEEEEEEEcCCeEEEEEEEEEECCCCeEEEE
Confidence 468999999998854322 11222 2345678999999999877899999999999999999999998 5999999
Q ss_pred EEEecccc
Q 040957 234 LLASFQKE 241 (430)
Q Consensus 234 ~~~sf~~~ 241 (430)
++++|...
T Consensus 132 a~~t~~~~ 139 (148)
T 3f5o_A 132 GRHTKHLG 139 (148)
T ss_dssp EEEEEECC
T ss_pred EEEEEEcc
Confidence 99999765
No 66
>2gvh_A AGR_L_2016P; 15159470, acyl-COA hydrolase, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.50A {Agrobacterium tumefaciens} SCOP: d.38.1.1 d.38.1.1
Probab=98.18 E-value=7e-05 Score=69.35 Aligned_cols=206 Identities=10% Similarity=0.021 Sum_probs=124.4
Q ss_pred CceeehhHHHHHHHHHHhcc----CCCCCcceee-eeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEEC------Ce
Q 040957 161 FGKVFGGQLVGQALAAASKT----VDCLKIVHSL-HCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQK------GN 229 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~----~~~~~~~~s~-~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~------g~ 229 (430)
.+.+|||.++..+=.|+... ........++ +++|++|...+..++++.+.++.||+.....++++.+ ++
T Consensus 43 ~G~v~gg~~~~~~D~a~~~~a~~~~~~~~vt~~~~~i~f~~p~~~gd~l~v~~~v~~~G~~s~~~~~~v~~~~~~~~~~~ 122 (288)
T 2gvh_A 43 HGTLFGGTGLALMDRVAFIAATRFGRTPFVTASCERIDFRQPARIGHIVEFTARPVKAGRRSLTVEVEMVAETIIGRQQH 122 (288)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHHCSCEEEEEECCEECCCCCSSCEEEEEEEEEEEECSSEEEEEEEEEEEETTTCCEE
T ss_pred CCcEeHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeeEEEeCcCCCCCEEEEEEEEEEECCcEEEEEEEEEEecCCCCceE
Confidence 45899999998876654321 2222334455 5999999998778999999999999999999999864 36
Q ss_pred eEEEEEEeccccCCCcccCccCCCCCCCCCCCCCHHHHHHhhcCCCCCchhhHhhhhccCCCCCCeEEEEcCCCCCCCCC
Q 040957 230 IIFTLLASFQKEEQGFEHQETTMPLVPAPEMLLSMEELRERRLTDPRLPRSYRNKVASKEFVPWPIDIRFCEPNSYTNQS 309 (430)
Q Consensus 230 ~~~~~~~sf~~~~~~~~~~~~~~p~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~~~~~~~~ 309 (430)
+++.+.++|-.-+..-... +.|-|+.++.-++ . .
T Consensus 123 l~a~a~~t~V~vd~~~~~k-----p~~iP~~~~~~~e----------~-------------------------------~ 156 (288)
T 2gvh_A 123 TCTRGIFHMVAIPEGEDAA-----SYVLPELLTEETP----------D-------------------------------P 156 (288)
T ss_dssp EEEEEEEEEEECCCSTTCT-----TCCCCCEECCCCC----------C--------------------------------
T ss_pred EEEEEEEEEEEeChhhcCC-----cccCCccccCCcc----------c-------------------------------C
Confidence 7788877775432100011 1222222211000 0 0
Q ss_pred CCCCeeEEEEecCCCCCCChHHHHHHHHHHhhhhhhhhhcccCccCCCcceeeecce-eeeccCCCCCCCeEEeEEeecc
Q 040957 310 KSPPSLRYWFRAKGKLSDDQALHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDH-SMWFHRSFRADDWLLFVIVSPV 388 (430)
Q Consensus 310 ~~~~~~~~W~R~~~~~~~~~~~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~-si~f~~~~~~~~W~l~~~~~~~ 388 (430)
.+.-.....++..+--+. ...|...+.-+.|......+.... + ...++.+. ++.|++|+..++++..+.+...
T Consensus 157 ~~~~~~~~~v~~~~~n~~-G~v~gG~~~~~~d~a~~~~a~~~~---~--~~~vt~~~d~i~f~~p~~~gd~l~v~~~v~~ 230 (288)
T 2gvh_A 157 SDAVTMVEIVFPDQANSA-GRMFGGEAIAYMTKAAFVAASRYC---G--KLVVLASSERIDFARAIEIGEIVEAQAHVER 230 (288)
T ss_dssp --CEEEEEECCGGGBCTT-SBBCHHHHHHHHHHHHHHHHHHHH---S--SEEEEEEECCEEBSSCCBTTEEEEEEEEEEE
T ss_pred CceEEEEEEEcHHHCCCC-CcCcHHHHHHHHHHHHHHHHHHhc---C--CceEEEEeeeEEEeCcccCCCEEEEEEEEEE
Confidence 001111222232211111 122333333344543211111111 1 23567777 9999999999999999999999
Q ss_pred eeCCeeeEEEEEEccC---C--CEEEEEeccceec
Q 040957 389 ASKARGFVSGEMFNTK---G--ELLVSLTQEALLR 418 (430)
Q Consensus 389 ~~~gr~~~~~~i~~~~---G--~lvA~~~Q~~l~r 418 (430)
.++-....+.++++++ | +++|++.-..+..
T Consensus 231 ~g~~s~~~~~~v~~~~~~~g~~~l~a~a~~t~v~v 265 (288)
T 2gvh_A 231 VGRSSMSIQTKLWSENLLTGERHITATGHFTMVAV 265 (288)
T ss_dssp ECSSEEEEEEEEEEEETTTCCEEEEEEEEEEEEEE
T ss_pred eCCCEEEEEEEEEEccCCCCceEEEEEEEEEEEEE
Confidence 9999999999999876 5 6888887765543
No 67
>3nwz_A BH2602 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, unknown FUN; HET: COA; 2.57A {Bacillus halodurans}
Probab=98.18 E-value=7.7e-06 Score=69.99 Aligned_cols=80 Identities=14% Similarity=0.066 Sum_probs=65.9
Q ss_pred CceeehhHHHHHHHHHHhc----cCCCC--CcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEE-CCeeEEE
Q 040957 161 FGKVFGGQLVGQALAAASK----TVDCL--KIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQ-KGNIIFT 233 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~----~~~~~--~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q-~g~~~~~ 233 (430)
.+.+|||.+++++=.|+.. ..+++ ....+++++|++|+. +.++..+.+.++.||+.....++++. +|++++.
T Consensus 78 ~G~vhGG~l~tl~D~a~~~a~~~~~~~~~~~vt~~l~i~fl~P~~-g~~l~~~a~v~~~gr~~~~~~~~v~~~~g~lvA~ 156 (176)
T 3nwz_A 78 LNMVHGGITATLLDTAMGQMVNRQLPDGQSAVTSELNIHYVKPGM-GTYLRAVASIVHQGKQRIVVEGKVYTDQGETVAM 156 (176)
T ss_dssp TSSBCHHHHHHHHHHHHHHHHHHTSCTTCCEEEEEEEEEECSCCC-SSEEEEEEEEEEECSSEEEEEEEEECTTSCEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEEEEEEccCC-CCEEEEEEEEEEeCCCEEEEEEEEEeCCCcEEEE
Confidence 4689999999988555432 22222 346678999999998 78999999999999999999999997 7999999
Q ss_pred EEEecccc
Q 040957 234 LLASFQKE 241 (430)
Q Consensus 234 ~~~sf~~~ 241 (430)
++++|...
T Consensus 157 a~~t~~v~ 164 (176)
T 3nwz_A 157 GTGSFFVL 164 (176)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEe
Confidence 99999765
No 68
>1zki_A Hypothetical protein PA5202; structural genomics, PSI, protein ST initiative, midwest center for structural genomics, MCSG, U function; 1.70A {Pseudomonas aeruginosa} SCOP: d.38.1.5
Probab=98.17 E-value=1.1e-05 Score=65.57 Aligned_cols=79 Identities=9% Similarity=0.074 Sum_probs=65.3
Q ss_pred CceeehhHHHHHHHHHHhc----cCCC--CCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEECCeeEEEE
Q 040957 161 FGKVFGGQLVGQALAAASK----TVDC--LKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKGNIIFTL 234 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~----~~~~--~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~g~~~~~~ 234 (430)
.+.+|||.+++++=.|+.. ..++ .....+++++|++|+. +.++.++.+.+|.||+....+++++++|++++.+
T Consensus 46 ~g~vhgG~~~~l~d~a~~~~~~~~~~~~~~~vt~~l~i~fl~p~~-g~~l~~~a~v~~~g~~~~~~~~~i~~~g~~va~a 124 (133)
T 1zki_A 46 GGVMHGGALFSLMDVTMGLACSSSHGFDRQSVTLECKINYIRAVA-DGEVRCVARVLHAGRRSLVVEAEVRQGDKLVAKG 124 (133)
T ss_dssp TSSBCHHHHHHHHHHHHHHHHHHHHCTTSCEEEEEEEEEECSCCC-SSEEEEEEEEEEECSSEEEEEEEEEETTEEEEEE
T ss_pred CCcCcHHHHHHHHHHHHHHHHHhccCCCCceEEEEEEEEEECcCC-CCEEEEEEEEEECCceEEEEEEEEEECCEEEEEE
Confidence 4589999998887555432 2222 2347789999999998 7899999999999999999999999999999999
Q ss_pred EEeccc
Q 040957 235 LASFQK 240 (430)
Q Consensus 235 ~~sf~~ 240 (430)
+++|..
T Consensus 125 ~~~~~~ 130 (133)
T 1zki_A 125 QGTFAQ 130 (133)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 998854
No 69
>2h4u_A Thioesterase superfamily member 2; structural genomics, structural genomics consortium, SGC, hydrolase; 2.20A {Homo sapiens} SCOP: d.38.1.5
Probab=98.16 E-value=2.4e-05 Score=64.58 Aligned_cols=79 Identities=16% Similarity=0.235 Sum_probs=63.5
Q ss_pred CceeehhHHHHHHHHHHh---c-cCC-CCCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEE--CCeeEEE
Q 040957 161 FGKVFGGQLVGQALAAAS---K-TVD-CLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQ--KGNIIFT 233 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~---~-~~~-~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q--~g~~~~~ 233 (430)
.+.+|||.+++++=.|+. . ..+ ......++++.|++|+.++..+.++.+.++.||+....++++++ +|++++.
T Consensus 57 ~g~vhGG~l~~l~D~a~~~a~~~~~~~~~~vt~~l~i~fl~pv~~Gd~l~~~a~v~~~gr~~~~~~~~i~~~~~g~lva~ 136 (145)
T 2h4u_A 57 IGTLHGGLTATLVDNISTMALLCTERGAPGVSVDMNITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIAQ 136 (145)
T ss_dssp TSBBCHHHHHHHHHHHHHHHHHTSSSCCCCEEEEEEEEECSCCBTTCEEEEEEEEEEECSSEEEEEEEEEETTTCCEEEE
T ss_pred CCcChHHHHHHHHHHHHHHHHHHhCCCCceEEEEEEEEEecCCCCCCEEEEEEEEEEcCCcEEEEEEEEEECCCCeEEEE
Confidence 468999999998754432 1 122 12345678999999999877899999999999999999999998 6899999
Q ss_pred EEEecc
Q 040957 234 LLASFQ 239 (430)
Q Consensus 234 ~~~sf~ 239 (430)
++.+|.
T Consensus 137 a~~t~~ 142 (145)
T 2h4u_A 137 GRHTKH 142 (145)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 988874
No 70
>2qwz_A Phenylacetic acid degradation-related protein; putative thioesterase, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=98.15 E-value=1.3e-05 Score=67.39 Aligned_cols=81 Identities=11% Similarity=0.081 Sum_probs=65.6
Q ss_pred CceeehhHHHHHHHHHHhc----cCCC--CCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEE--CCeeEE
Q 040957 161 FGKVFGGQLVGQALAAASK----TVDC--LKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQ--KGNIIF 232 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~----~~~~--~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q--~g~~~~ 232 (430)
.+.+|||.+++++=.|+.. ..++ .....+++++|++|+.++.++..+.+.++.||+....++++++ +|++++
T Consensus 68 ~g~vhGG~l~al~D~a~~~a~~~~~~~~~~~vt~~l~i~flrPv~~Gd~l~a~a~v~~~gr~~~~~~~~v~~~~~g~lvA 147 (159)
T 2qwz_A 68 GGTVSGPSMFALADVSVYALVLAHLGREALAVTTNASLDFMRKPESGRDLLGQARLLKLGRTLAVGDILLFSEGMEAPVA 147 (159)
T ss_dssp TCCCCHHHHHHHHHHHHHHHHHHHHCTTCCCEEEEEEEEECSCCCTTSCEEEEEEEEEECSSEEEEEEEEEETTCSSCSE
T ss_pred CCcEeHHHHHHHHHHHHHHHHHHhCCCCCceEEEEEEEEEEcCCCCCCEEEEEEEEEEcCCCEEEEEEEEEECCCCcEEE
Confidence 4689999999986444322 2232 2346678999999999877999999999999999999999999 689999
Q ss_pred EEEEecccc
Q 040957 233 TLLASFQKE 241 (430)
Q Consensus 233 ~~~~sf~~~ 241 (430)
.++++|...
T Consensus 148 ~a~~t~~i~ 156 (159)
T 2qwz_A 148 RSTMTYSIP 156 (159)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEEEe
Confidence 999988643
No 71
>1wlu_A PAAI protein, phenylacetic acid degradation protein PAAI; thioesterase, hot DOG fold, S genomics; 1.45A {Thermus thermophilus HB8} SCOP: d.38.1.5 PDB: 1j1y_A 1wlv_A* 1wm6_A 1wn3_A* 2dsl_A
Probab=98.13 E-value=1.3e-05 Score=65.28 Aligned_cols=80 Identities=16% Similarity=0.141 Sum_probs=66.2
Q ss_pred CceeehhHHHHHHHHHHhcc---CCCCCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEECCeeEEEEEEe
Q 040957 161 FGKVFGGQLVGQALAAASKT---VDCLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKGNIIFTLLAS 237 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~---~~~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~g~~~~~~~~s 237 (430)
.+.+|||.+++++-.|+... .+ .....+++++|++|+..+..+.++.+.++.||+....+++++++|++++.+.++
T Consensus 35 ~g~vhgG~~~~l~d~a~~~~~~~~g-~~vt~~~~i~f~~p~~~Gd~l~~~~~v~~~g~~~~~~~~~i~~~g~~va~~~~~ 113 (136)
T 1wlu_A 35 HGTAHGGFLYALADSAFALASNTRG-PAVALSCRMDYFRPLGAGARVEARAVEVNLSRRTATYRVEVVSEGKLVALFTGT 113 (136)
T ss_dssp TSSBCHHHHHHHHHHHHHHHHHTTS-CEEEEEEEEEECSCCCTTCEEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEE
T ss_pred CCCChHHHHHHHHHHHHHHHHhcCC-CEEEEEEEEEEeCCCCCCCEEEEEEEEEECCCcEEEEEEEEEECCEEEEEEEEE
Confidence 45899999998875444322 22 334667999999999987799999999999999999999999999999999998
Q ss_pred cccc
Q 040957 238 FQKE 241 (430)
Q Consensus 238 f~~~ 241 (430)
|...
T Consensus 114 ~~~~ 117 (136)
T 1wlu_A 114 VFRL 117 (136)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 8654
No 72
>4i82_A Putative uncharacterized protein; PAAI/YDII-like, hot DOG fold, thioesterase, hydrolase; 2.50A {Streptococcus pneumoniae}
Probab=98.12 E-value=1.3e-05 Score=65.56 Aligned_cols=81 Identities=15% Similarity=0.187 Sum_probs=66.1
Q ss_pred CceeehhHHHHHHHHHHhc---cCCCCCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEE-CCeeEEEEEE
Q 040957 161 FGKVFGGQLVGQALAAASK---TVDCLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQ-KGNIIFTLLA 236 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~---~~~~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q-~g~~~~~~~~ 236 (430)
.+.+|||.+++++=.|+.. .........+++++|++|+..+.++..+.+.++.||+....+++++. +|++++.+++
T Consensus 42 ~G~vhGG~l~~l~D~a~~~a~~~~~~~~vt~~l~i~fl~p~~~g~~l~~~a~v~~~g~~~~~~~~~v~~~~g~lva~a~~ 121 (137)
T 4i82_A 42 YGNAHGGYLFTLCDQISGLVVISLGLDGVTLQSSINYLKAGKLDDVLTIKGECVHQGRTTCVMDVDITNQEGRNVCKATF 121 (137)
T ss_dssp TSBBCHHHHHHHHHHHHHHHHHTTTCEEEEEEEEEEECSCCBTTCEEEEEEEEEEECSSEEEEEEEEECTTSCEEEEEEE
T ss_pred CCCChHHHHHHHHHHHHHHHHHhcCCCeEEEEEEEEEecccCCCCEEEEEEEEEEeCCcEEEEEEEEEcCCCcEEEEEEE
Confidence 4689999999987544422 22223345678999999999877999999999999999999999995 7999999999
Q ss_pred ecccc
Q 040957 237 SFQKE 241 (430)
Q Consensus 237 sf~~~ 241 (430)
+|...
T Consensus 122 t~~~~ 126 (137)
T 4i82_A 122 TMFVT 126 (137)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 98764
No 73
>1o0i_A Hypothetical protein HI1161; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.70A {Haemophilus influenzae} PDB: 1sc0_A 2b6e_A 3lz7_A
Probab=98.11 E-value=9.6e-06 Score=66.37 Aligned_cols=79 Identities=14% Similarity=0.145 Sum_probs=63.6
Q ss_pred CceeehhHHHHHHHHHHh----ccCCCCC--cceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEE-CCeeEEE
Q 040957 161 FGKVFGGQLVGQALAAAS----KTVDCLK--IVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQ-KGNIIFT 233 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~----~~~~~~~--~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q-~g~~~~~ 233 (430)
.+.+|||.+++++=.|+. ...+++. ...+++++|++|+..+ ++..+.+.++.||+....+++++. +|+++++
T Consensus 50 ~G~~hGG~l~~l~D~a~~~a~~~~~~~~~~~vt~~l~i~fl~p~~~g-~l~~~a~v~~~gr~~~~~~~~i~~~~g~lvA~ 128 (138)
T 1o0i_A 50 FGVLHGGVSVALAETIGSLAGSLCLEEGKTVVGLDINANHLRPVRSG-KVTARATPINLGRNIQVWQIDIRTEENKLCCV 128 (138)
T ss_dssp TSSBCHHHHHHHHHHHHHHHHHHTSCTTEEEEEEEEEEEECSCCCSS-EEEEEEEEEEECSSEEEEEEEEECTTSCEEEE
T ss_pred CCccHHHHHHHHHHHHHHHHHhhhcCCCceEEEEEEEEEEEccCCCc-EEEEEEEEEECCCcEEEEEEEEEeCCCcEEEE
Confidence 468999999998754432 2333333 3556899999999986 999999999999999999999995 6899999
Q ss_pred EEEeccc
Q 040957 234 LLASFQK 240 (430)
Q Consensus 234 ~~~sf~~ 240 (430)
++++|..
T Consensus 129 a~~t~~i 135 (138)
T 1o0i_A 129 SRLTLSV 135 (138)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9998853
No 74
>2pim_A Phenylacetic acid degradation-related protein; thioesterase superfamily, phenylacetic acid degradation-RELA protein; 2.20A {Ralstonia eutropha JMP134}
Probab=98.07 E-value=2e-05 Score=64.59 Aligned_cols=79 Identities=18% Similarity=0.152 Sum_probs=65.1
Q ss_pred CceeehhHHHHHHHHHHhcc----CCC--CCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEECCeeEEEE
Q 040957 161 FGKVFGGQLVGQALAAASKT----VDC--LKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKGNIIFTL 234 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~----~~~--~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~g~~~~~~ 234 (430)
.+.+|||.+++++=.|+... .++ .....+++++|++|+..+. +..+.+.++.||+....++++.++|++++++
T Consensus 53 ~g~vhGG~~~~l~D~a~~~~~~~~~~~~~~~vt~~l~i~fl~p~~~g~-l~~~a~v~~~g~~~~~~~~~i~~~g~~va~a 131 (141)
T 2pim_A 53 VGQVQGGMLGAMLDDVTAMLVTATLEDGASCSTLNLNLSFLRPAQAGL-LRGRARLERRGRNVCNVVGELSQDGKLVATA 131 (141)
T ss_dssp TSSBCHHHHHHHHHHHHHHHHHHTCCTTCCCEEEEEEEEECSCCCSEE-EEEEEEEEEECSSEEEEEEEEEETTEEEEEE
T ss_pred CCCChHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEEEEEecCCCCCe-EEEEEEEEEeCCcEEEEEEEECCCCcEEEEE
Confidence 45899999999886655432 222 3356789999999998755 9999999999999999999998899999999
Q ss_pred EEeccc
Q 040957 235 LASFQK 240 (430)
Q Consensus 235 ~~sf~~ 240 (430)
+++|..
T Consensus 132 ~~t~~~ 137 (141)
T 2pim_A 132 TATCMV 137 (141)
T ss_dssp EEEEEC
T ss_pred EEEEEE
Confidence 998864
No 75
>1vh5_A Hypothetical protein YDII; PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; 1.34A {Escherichia coli} SCOP: d.38.1.5 PDB: 1vi8_A 1sbk_A
Probab=98.05 E-value=1.6e-05 Score=65.84 Aligned_cols=80 Identities=13% Similarity=0.093 Sum_probs=65.9
Q ss_pred CceeehhHHHHHHHHHHh----ccCCCCCc--ceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEE-CCeeEEE
Q 040957 161 FGKVFGGQLVGQALAAAS----KTVDCLKI--VHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQ-KGNIIFT 233 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~----~~~~~~~~--~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q-~g~~~~~ 233 (430)
.+.+|||.+++++=.|+. ...+++.. ..+++++|++|+..+ .+..+.+.++.||+....+++++. +|+++++
T Consensus 52 ~G~vhGG~l~~l~D~a~~~a~~~~~~~~~~~vt~~l~i~fl~p~~~G-~l~a~a~v~~~gr~~~~~~~~v~~~~g~lvA~ 130 (148)
T 1vh5_A 52 FGLLHGGASVVLAESIGSVAGYLCTEGEQKVVGLEINANHVRSAREG-RVRGVCKPLHLGSRHQVWQIEIFDEKGRLCCS 130 (148)
T ss_dssp TSSBCHHHHHHHHHHHHHHHHHHTSCTTCEEEEEEEEEEECSCCCSS-EEEEEEEEEEECSSEEEEEEEEECTTSCEEEE
T ss_pred CCcChHHHHHHHHHHHHHHHHHhhcCCCCcEEEEEEEEEEEcCCCCC-EEEEEEEEEEcCCCEEEEEEEEEeCCCCEEEE
Confidence 468999999999866552 23333333 557899999999986 999999999999999999999997 6899999
Q ss_pred EEEecccc
Q 040957 234 LLASFQKE 241 (430)
Q Consensus 234 ~~~sf~~~ 241 (430)
++++|...
T Consensus 131 a~~t~~~~ 138 (148)
T 1vh5_A 131 SRLTTAIL 138 (148)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 99998765
No 76
>2hbo_A Hypothetical protein (NP_422103.1); thioesterase/thiol ester dehydrase-isomerase fold, structura genomics; HET: MSE PE4; 1.85A {Caulobacter vibrioides} SCOP: d.38.1.5
Probab=98.03 E-value=1.6e-05 Score=66.68 Aligned_cols=81 Identities=19% Similarity=0.134 Sum_probs=65.9
Q ss_pred CceeehhHHHHHHHHHHhc----cCCCCCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEECCeeEEEEEE
Q 040957 161 FGKVFGGQLVGQALAAASK----TVDCLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKGNIIFTLLA 236 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~----~~~~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~g~~~~~~~~ 236 (430)
.+.+|||.+++++=.|+.. ..+......+++++|++|+..+..+.++.+.++.||+.....++++++|++++.+++
T Consensus 58 ~G~vhGG~~~~l~D~a~~~a~~~~~~~~~vt~~l~i~fl~p~~~Gd~l~~~a~v~~~g~~~~~~~~~i~~~g~lva~a~~ 137 (158)
T 2hbo_A 58 LGNCHGGMLMSFADMAWGRIISLQKSYSWVTVRLMCDFLSGAKLGDWVEGEGELISEEDMLFTVRGRIWAGERTLITGTG 137 (158)
T ss_dssp SSBBCHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEEECSCCBTTCEEEEEEEEEEEETTEEEEEEEEEETTEEEEEEEE
T ss_pred CCchHHHHHHHHHHHHHHHHHHHccCCcEEEEEEEEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEECCEEEEEEEE
Confidence 4589999999986444322 222233466789999999998667999999999999999999999999999999999
Q ss_pred ecccc
Q 040957 237 SFQKE 241 (430)
Q Consensus 237 sf~~~ 241 (430)
+|...
T Consensus 138 t~~~~ 142 (158)
T 2hbo_A 138 VFKAL 142 (158)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 88654
No 77
>3e8p_A Uncharacterized protein; X-RAY Q8E9M7 SOR246 NESG structure, structural genomics, PSI-2, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=98.02 E-value=1.4e-05 Score=67.42 Aligned_cols=78 Identities=14% Similarity=0.072 Sum_probs=62.8
Q ss_pred CceeehhHHHHHHHHHHhccC----CC---------------CCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEE
Q 040957 161 FGKVFGGQLVGQALAAASKTV----DC---------------LKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRR 221 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~~----~~---------------~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~ 221 (430)
.+.+|||.+++++=.|+...+ ++ ...-.++++.|++|+. +.++..+.+.+|.||+....+
T Consensus 65 ~G~vHGG~iatL~D~a~g~a~~~~~~~~~~~~~~~~~~~~~~~~vT~~l~v~flrp~~-g~~l~a~a~v~~~Gr~~~~~~ 143 (164)
T 3e8p_A 65 QQILHGGVTATVLDVVGGLTAFAGLVASRDDWTIEELQQRLQTLGTIDMRVDYLRPGR-GQIFTGTGSVIRAGNRVSVCR 143 (164)
T ss_dssp TTEECHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHCEEEEEEEEECSCCC-CSEEEEEEEEEECCSSEEEEE
T ss_pred CCeEeHHHHHHHHHHHHHHHHHHhcccccccccccccccccccceEEEEEEEEecCCC-CCeEEEEEEEEEcCCcEEEEE
Confidence 468999999998744432221 11 1234589999999998 678999999999999999999
Q ss_pred EEEEE-CCeeEEEEEEecc
Q 040957 222 VDAIQ-KGNIIFTLLASFQ 239 (430)
Q Consensus 222 V~~~Q-~g~~~~~~~~sf~ 239 (430)
+++++ +|+++++++++|.
T Consensus 144 ~~i~~~~g~lvA~a~~tf~ 162 (164)
T 3e8p_A 144 MELHNEQGTHIAFGTGTYM 162 (164)
T ss_dssp EEEEETTCCEEEEEEEEEE
T ss_pred EEEEeCCCCEEEEEEEEEE
Confidence 99999 6999999999985
No 78
>3s4k_A Putative esterase RV1847/MT1895; seattle structural genomics center for infectious disease, S hydrolase; 1.70A {Mycobacterium tuberculosis} SCOP: d.38.1.0
Probab=97.99 E-value=1.5e-05 Score=65.81 Aligned_cols=80 Identities=13% Similarity=0.044 Sum_probs=63.7
Q ss_pred CceeehhHHHHHHHHHHhcc----CCC---CC--cceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEE-CCee
Q 040957 161 FGKVFGGQLVGQALAAASKT----VDC---LK--IVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQ-KGNI 230 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~----~~~---~~--~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q-~g~~ 230 (430)
.+.+|||.+++++=.|+... .++ +. ...+++++|++|+..+ ++..+.+.++.||+....+++++. +|++
T Consensus 51 ~G~vHGG~l~tl~D~a~~~a~~~~~~~~~~~~~~vt~~l~i~fl~p~~~g-~l~~~a~v~~~gr~~~~~~~~i~~~~g~l 129 (144)
T 3s4k_A 51 TGVVHGGVYCAMIESIASMAAFAWLNSHGEGGSVVGVNNNTDFVRSISSG-MVYGTAEPLHRGRRQQLWLVTITDDTDRV 129 (144)
T ss_dssp TSSBCHHHHHHHHHHHHHHHHHHHHTC--CCCEEEEEEEEEEECCCCCSE-EEEEEEEEEEECSSEEEEEEEEECTTSCE
T ss_pred CCcChHHHHHHHHHHHHHHHHHhhcccccCCceeEEEEEEEEEECCCCCC-EEEEEEEEEEcCCCEEEEEEEEEcCCCCE
Confidence 45899999999864443222 221 22 3557899999999886 999999999999999999999995 6899
Q ss_pred EEEEEEecccc
Q 040957 231 IFTLLASFQKE 241 (430)
Q Consensus 231 ~~~~~~sf~~~ 241 (430)
++.++++|..-
T Consensus 130 vA~a~~t~~~~ 140 (144)
T 3s4k_A 130 VARGQVRLQNL 140 (144)
T ss_dssp EEEEEEEEEEE
T ss_pred EEEEEEEEEEe
Confidence 99999998653
No 79
>3e1e_A Thioesterase family protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Silicibacter pomeroyi}
Probab=97.97 E-value=1.6e-05 Score=65.28 Aligned_cols=79 Identities=14% Similarity=0.190 Sum_probs=63.2
Q ss_pred CceeehhHHHHHHHHHHh----ccCCCCC--cceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEE----ECCee
Q 040957 161 FGKVFGGQLVGQALAAAS----KTVDCLK--IVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAI----QKGNI 230 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~----~~~~~~~--~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~----Q~g~~ 230 (430)
.+.+|||.+++++=.|+. ...+++. ...+++++|++|+. +.++..+.+.++.||+....+++++ ++|++
T Consensus 50 ~G~~hGG~l~~l~D~a~~~a~~~~~~~~~~~vt~~l~v~fl~p~~-g~~l~~~a~v~~~gr~~~~~~~~v~~~~~~~g~l 128 (141)
T 3e1e_A 50 HGFLHAGIVSTVLDSACGYAAFSLMEEEAAVLTVEFKVNFLNPAE-GERFAFRAEVVKPGRTLTVATATAYAFRDGEERA 128 (141)
T ss_dssp TSSBCHHHHHHHHHHHHHHHHHTTSCTTEEEEEEEEEEEECSCCC-SSEEEEEEEEEECCSSEEEEEEEEEEESSSCEEE
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEEEEEEccCC-CCEEEEEEEEEEcCCCEEEEEEEEEEccCCCCcE
Confidence 458999999998744333 2333232 35568999999998 7899999999999999999999999 56899
Q ss_pred EEEEEEeccc
Q 040957 231 IFTLLASFQK 240 (430)
Q Consensus 231 ~~~~~~sf~~ 240 (430)
+++++++|..
T Consensus 129 va~a~~t~~~ 138 (141)
T 3e1e_A 129 IATMTATLMA 138 (141)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEEEEE
Confidence 9999998854
No 80
>2fs2_A Phenylacetic acid degradation protein PAAI; operon, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: d.38.1.5 PDB: 1psu_A
Probab=97.96 E-value=4.8e-05 Score=63.20 Aligned_cols=81 Identities=12% Similarity=0.110 Sum_probs=64.7
Q ss_pred CceeehhHHHHHHHHHHhc---cCCCCCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEE-CCeeEEEEEE
Q 040957 161 FGKVFGGQLVGQALAAASK---TVDCLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQ-KGNIIFTLLA 236 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~---~~~~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q-~g~~~~~~~~ 236 (430)
.+.+|||.+++++=.|+.. .........++++.|++|+..+..+..+.+.++.||+.....++++. +|++++++++
T Consensus 49 ~g~vhGG~~~~l~D~a~~~a~~~~g~~~vt~~l~i~fl~Pv~~Gd~l~~~a~v~~~gr~~~~~~~~i~~~~g~lva~a~~ 128 (151)
T 2fs2_A 49 HQSCHGGQLFSLADTAFAYACNSQGLAAVASACTIDFLRPGFAGDTLTATAQVRHQGKQTGVYDIEIVNQQQKTVALFRG 128 (151)
T ss_dssp TSBBCHHHHHHHHHHHHHHHHHTTTCCCEEEEEEEEECSCCBTTCEEEEEEEEEEECSSEEEEEEEEECTTSCEEEEEEE
T ss_pred CCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEEecCCCCCCEEEEEEEEEEcCCcEEEEEEEEEeCCCCEEEEEEE
Confidence 4589999999987554422 22223345678999999999877999999999999999999999994 7899999999
Q ss_pred ecccc
Q 040957 237 SFQKE 241 (430)
Q Consensus 237 sf~~~ 241 (430)
+|...
T Consensus 129 t~~~~ 133 (151)
T 2fs2_A 129 KSHRI 133 (151)
T ss_dssp EEEC-
T ss_pred EEEEe
Confidence 88653
No 81
>3gek_A Putative thioesterase YHDA; structure genomics, NESG, KR113, Q9CHK5_lacla, lactococcus L YHDA, structural genomics, PSI-2; 2.24A {Lactococcus lactis subsp}
Probab=97.95 E-value=5.2e-05 Score=62.48 Aligned_cols=81 Identities=11% Similarity=0.016 Sum_probs=64.0
Q ss_pred CceeehhHHHHHHHHHH----hccCCCCCcc--eeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEE-CCeeEEE
Q 040957 161 FGKVFGGQLVGQALAAA----SKTVDCLKIV--HSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQ-KGNIIFT 233 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa----~~~~~~~~~~--~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q-~g~~~~~ 233 (430)
.+.+|||.+++++=.|+ ....+++... .++++.|++|+..++.+..+.+.++.||+....+|+++. +|+++++
T Consensus 44 ~G~vHGG~l~tLaD~a~g~a~~~~~~~~~~~vT~~l~i~flrpa~~~g~l~a~a~v~~~Gr~~~~~~v~i~d~~g~lvA~ 123 (146)
T 3gek_A 44 QGFLNGGASLALAEITAGMASNAIGSGQYFAFGQSINANHLNPKKCEGFVNARGLLLKNGKRNHVWEIKITDENETLISQ 123 (146)
T ss_dssp TSBBCHHHHHHHHHHHHHHHHHHHHTTSCEEEEEEEEEEECSCCBSSSEEEEEEEEEEECSSEEEEEEEEEETTCCEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEEcccCCCCcEEEEEEEEEECCCcEEEEEEEEEeCCCCEEEE
Confidence 45899999999873332 2233434433 357899999999556999999999999999999999997 5899999
Q ss_pred EEEecccc
Q 040957 234 LLASFQKE 241 (430)
Q Consensus 234 ~~~sf~~~ 241 (430)
++.+|...
T Consensus 124 a~~t~~i~ 131 (146)
T 3gek_A 124 ITVVNALV 131 (146)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 99998654
No 82
>3lw3_A HP0420 homologue; hotdog-fold, structural genomics, unknown function; 1.60A {Helicobacter felis} PDB: 3lwg_A
Probab=97.95 E-value=7.3e-05 Score=61.28 Aligned_cols=80 Identities=18% Similarity=0.113 Sum_probs=66.5
Q ss_pred ceeehhHHHHHHHHHHhccCCC-CCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEECCeeEEEEEEeccc
Q 040957 162 GKVFGGQLVGQALAAASKTVDC-LKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKGNIIFTLLASFQK 240 (430)
Q Consensus 162 ~~~~GG~~~a~al~Aa~~~~~~-~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~g~~~~~~~~sf~~ 240 (430)
+.+|||++.+||=.||...++. .-.-.+.++.|++|+..+..+..+.+.++.|++.....|+++++++.++.+.+.+-.
T Consensus 53 ~~vHGG~ifslAD~aa~~a~n~~~~Vt~~~~I~Fl~Pv~~Gd~l~A~A~v~~~g~r~~~v~V~v~~~~~~V~~G~f~~~~ 132 (145)
T 3lw3_A 53 DVVHAGFIVGAASFAALCALNKKNSLISSMKVNLLAPIEIKQEIYFNATITHTSSKKSTIRVEGEFMEIKVFEGDFEILV 132 (145)
T ss_dssp TEECHHHHHHHHHHHHHHHHCCTTEEEEEEEEEECSCCCTTCCEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CcEeHHHHHHHHHHHHHHHhCCCCEEEEEEEEEECccCCCCCEEEEEEEEEEECCCEEEEEEEEEECCEEEEEEEEEEEE
Confidence 4899999999985555555542 223456789999999997789999999999999999999999999999999988755
Q ss_pred c
Q 040957 241 E 241 (430)
Q Consensus 241 ~ 241 (430)
.
T Consensus 133 ~ 133 (145)
T 3lw3_A 133 F 133 (145)
T ss_dssp C
T ss_pred e
Confidence 4
No 83
>1ixl_A Hypothetical protein PH1136; alpha+beta, hot-DOG-fold, structural genomics, unknown funct; 1.94A {Pyrococcus horikoshii} SCOP: d.38.1.5
Probab=97.94 E-value=5.8e-05 Score=60.94 Aligned_cols=81 Identities=15% Similarity=0.055 Sum_probs=64.4
Q ss_pred CceeehhHHHHHHHHHHhccCC-CCCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEECCeeEEEEEEecc
Q 040957 161 FGKVFGGQLVGQALAAASKTVD-CLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKGNIIFTLLASFQ 239 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~~~-~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~g~~~~~~~~sf~ 239 (430)
.+.+|||.+++++-.++..... +.....++++.|++|+.++..+..+.+.++.||+....+++++|+|++++.+++.+-
T Consensus 43 ~g~~hGg~~~~l~d~~~~~~~~~~~~vt~~~~i~f~~pv~~Gd~l~~~~~v~~~~~~~~~~~~~v~~~g~~va~g~~~~~ 122 (131)
T 1ixl_A 43 KGLVHGGFTFGLADYAAMLAVNEPTVVLGKAEVRFTKPVKVGDKLVAKAKIIEDLGKKKIVEVKVYREEEVVLEGKFYCY 122 (131)
T ss_dssp TCBBCHHHHHHHHHHHHHHHHCCTTEEEEEEEEEECSCCBTTCEEEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCEEEhHHHHHHHHHHHHhhccCCceEEEEEEEEECCCCCCCCEEEEEEEEEEecCcEEEEEEEEEECCEEEEEEEEEEE
Confidence 4579999999886444433222 233355689999999998767999999999999999999999999999998888775
Q ss_pred cc
Q 040957 240 KE 241 (430)
Q Consensus 240 ~~ 241 (430)
..
T Consensus 123 ~~ 124 (131)
T 1ixl_A 123 VL 124 (131)
T ss_dssp EC
T ss_pred Ec
Confidence 43
No 84
>3lbe_A Putative uncharacterized protein SMU.793; hypothetical protein, unknown function; HET: COA; 1.70A {Streptococcus mutans} PDB: 3lbb_A*
Probab=97.92 E-value=3.4e-05 Score=64.92 Aligned_cols=81 Identities=12% Similarity=0.118 Sum_probs=64.8
Q ss_pred CceeehhHHHHHHHHHHhc---cCCCCCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEE-CCeeEEEEEE
Q 040957 161 FGKVFGGQLVGQALAAASK---TVDCLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQ-KGNIIFTLLA 236 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~---~~~~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q-~g~~~~~~~~ 236 (430)
.+.+|||.+++++=.|+.. .......-.+++++|++|+..+..+..+.+.++.||+....+++++. +|++++.+++
T Consensus 73 ~G~vHGG~l~tl~D~a~g~a~~~~g~~~vT~~l~i~flrpv~~G~~l~a~a~v~~~gr~~~~~~~~i~~~~g~lvA~a~~ 152 (163)
T 3lbe_A 73 YGFAHGGYIFTLCDQISGLVSISTGFDAVTLQSSINYLKSGKLGDTLLIDGRCVHDGRTTKVVDVTVTNQLKQEVAKATF 152 (163)
T ss_dssp TSSBCHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEEECSCCCTTCEEEEEEEEEEECSSEEEEEEEEECTTCCEEEEEEE
T ss_pred CCcCHHHHHHHHHHHHHHHHHHhcCCcEEEEEEEEEEecCCCCCCEEEEEEEEEEcCCcEEEEEEEEEeCCCCEEEEEEE
Confidence 4589999999987444322 22222335578999999999877899999999999999999999996 7999999999
Q ss_pred ecccc
Q 040957 237 SFQKE 241 (430)
Q Consensus 237 sf~~~ 241 (430)
+|...
T Consensus 153 t~~~~ 157 (163)
T 3lbe_A 153 TMFVT 157 (163)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 98653
No 85
>2f41_A Transcription factor FAPR; 'HOT-DOG' fold, gene regulation; 2.50A {Bacillus subtilis} SCOP: d.38.1.5
Probab=97.89 E-value=0.00011 Score=58.47 Aligned_cols=81 Identities=14% Similarity=0.071 Sum_probs=62.2
Q ss_pred CCceeehhHHHHHHHHHHhccCCCCC-cceeeeeeeccCcCCCCCeEEEEEEe--eeCCCeeEEEEEEEECCeeEEEEEE
Q 040957 160 KFGKVFGGQLVGQALAAASKTVDCLK-IVHSLHCYFLLVGDLNIPIIYQVHRV--RDGNSFATRRVDAIQKGNIIFTLLA 236 (430)
Q Consensus 160 ~~~~~~GG~~~a~al~Aa~~~~~~~~-~~~s~~~~Fl~~~~~~~pi~~~V~~l--r~Gr~~s~~~V~~~Q~g~~~~~~~~ 236 (430)
..+.++||.++||+-.++....+... ......+.|++|+.++..+..+++.+ +.+++.....+++.|+|++++.+++
T Consensus 34 ~~gi~hGg~~~alad~~~~~~~~~~~~~~~~~~i~F~~Pv~~Gd~l~~~a~v~~~~~~~~~~~v~~~~~~~g~~v~~g~~ 113 (121)
T 2f41_A 34 RNQIARGHHLFAQANSLAVAVIDDELALTASADIRFTRQVKQGERVVAKAKVTAVEKEKGRTVVEVNSYVGEEIVFSGRF 113 (121)
T ss_dssp TTCBBCHHHHHHHHHHHHHHTC---CCCEEEEEEEECSCCBTTCEEEEEEEEEEECSSSSCEEEEEEEEETTEEEEEEEE
T ss_pred CCcEEchhHHHHHHHHHHHHhcCCceEEEEEeeEEEeCCcCCCCEEEEEEEEEEEEccCCEEEEEEEEEECCEEEEEEEE
Confidence 44589999999998766654443222 23345899999999976799999999 8777888899999999999988887
Q ss_pred eccc
Q 040957 237 SFQK 240 (430)
Q Consensus 237 sf~~ 240 (430)
.+..
T Consensus 114 ~~~~ 117 (121)
T 2f41_A 114 DMYR 117 (121)
T ss_dssp EEC-
T ss_pred EEEe
Confidence 7643
No 86
>3bnv_A CJ0977; virulence factor, hot-DOG fold, flagel unknown function; HET: MSE; 2.60A {Campylobacter jejuni}
Probab=97.86 E-value=0.00012 Score=60.82 Aligned_cols=81 Identities=15% Similarity=0.152 Sum_probs=65.1
Q ss_pred CceeehhHHHHHHHHHHhccCCCC-CcceeeeeeeccCcCCCCCeEEEEEEeeeC-CCeeEEEEEEEECCeeEEEEEEec
Q 040957 161 FGKVFGGQLVGQALAAASKTVDCL-KIVHSLHCYFLLVGDLNIPIIYQVHRVRDG-NSFATRRVDAIQKGNIIFTLLASF 238 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~~~~~-~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~G-r~~s~~~V~~~Q~g~~~~~~~~sf 238 (430)
.+.+|||.++||+-.++....+.. ..-.+..+.|++|+.++..+..+++.++.| ++.....++++|+|++++++++.+
T Consensus 62 ~g~~HGg~~~alad~a~~~~~~~~~~vt~~~~i~F~~PV~~GD~L~a~a~v~~~~~~~~~~v~~~~~~~g~~v~~g~~~~ 141 (152)
T 3bnv_A 62 QGLIFDAFIFAAANYVAQASINKEFSVIIGSKCFFYAPLKLGDVLELEAHALFDETSKKRDVKVVGHVKEIKMFEGTIQV 141 (152)
T ss_dssp TCBBCHHHHHHHHHHHHHHHHCCSSEEEEEEEEEECSCCBTTCEEEEEEEECCCSSCSEEEEEEEEEETTEEEEEEEEEE
T ss_pred CCcccHHHHHHHHHHHHHHHcCCCcEEEEEEEEEEeCCCCCCCEEEEEEEEEEEcCCcEEEEEEEEEECCEEEEEEEEEE
Confidence 368999999999866554433322 224457899999999977899999999999 999999999999999999988877
Q ss_pred ccc
Q 040957 239 QKE 241 (430)
Q Consensus 239 ~~~ 241 (430)
...
T Consensus 142 ~v~ 144 (152)
T 3bnv_A 142 VST 144 (152)
T ss_dssp EEC
T ss_pred EEc
Confidence 544
No 87
>1q4t_A Thioesterase; hot-DOG, hydrolase; HET: 4CO; 1.60A {Arthrobacter SP} SCOP: d.38.1.5 PDB: 1q4s_A* 1q4u_A* 3r37_A* 3r36_B* 3r3d_A* 3r34_A* 3r35_A* 3r3f_A* 3r32_A* 3r3a_A* 3r3b_A* 3r3c_A*
Probab=97.86 E-value=4.2e-05 Score=63.52 Aligned_cols=79 Identities=19% Similarity=0.144 Sum_probs=62.8
Q ss_pred CceeehhHHHHHHHHHHhc----cCCC-C--CcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEE-CCeeEE
Q 040957 161 FGKVFGGQLVGQALAAASK----TVDC-L--KIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQ-KGNIIF 232 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~----~~~~-~--~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q-~g~~~~ 232 (430)
.+.+|||.+++++=.|+.. ..++ + ....+++++|++|+..+ .+..+.+.++.||+....+++++. +|++++
T Consensus 60 ~G~vhGG~l~~l~D~a~~~a~~~~~~~~~~~~vt~~l~i~fl~p~~~G-~l~~~a~v~~~gr~~~~~~~~i~~~~g~lva 138 (151)
T 1q4t_A 60 WGLVHGGAYCALAEMLATEATVAVVHEKGMMAVGQSNHTSFFRPVKEG-HVRAEAVRIHAGSTTWFWDVSLRDDAGRLCA 138 (151)
T ss_dssp TSSBCHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEESSCCCSS-EEEEEEEEEEECSSEEEEEEEEECTTCCEEE
T ss_pred CCCChHHHHHHHHHHHHHHHHhhccccCCceEEEEEEEEEEECCCcCC-EEEEEEEEEECCCCEEEEEEEEEcCCCCEEE
Confidence 4589999999986444322 1221 2 23557899999999986 999999999999999999999995 789999
Q ss_pred EEEEeccc
Q 040957 233 TLLASFQK 240 (430)
Q Consensus 233 ~~~~sf~~ 240 (430)
.++++|..
T Consensus 139 ~a~~t~~~ 146 (151)
T 1q4t_A 139 VSSMSIAV 146 (151)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99988854
No 88
>3b7k_A Acyl-coenzyme A thioesterase 12; hotdog fold, structural genomics, structural genomics consor SGC, fatty acid metabolism, hydrolase; HET: COA; 2.70A {Homo sapiens}
Probab=97.78 E-value=0.00097 Score=62.96 Aligned_cols=243 Identities=11% Similarity=0.019 Sum_probs=125.2
Q ss_pred CceeehhHHHHHHHHHHh----ccCCCCCcceee-eeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEEC------Ce
Q 040957 161 FGKVFGGQLVGQALAAAS----KTVDCLKIVHSL-HCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQK------GN 229 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~----~~~~~~~~~~s~-~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~------g~ 229 (430)
.+.+|||.++..+=.||. +.........++ ++.|++|...+..++++....+.||+.....+++++. ++
T Consensus 40 ~G~v~gG~~l~~~D~aa~~~a~~~~~~~~vta~~~~i~F~~P~~~gd~l~v~a~V~~~G~sS~~v~~~v~~~~~~~~~~~ 119 (333)
T 3b7k_A 40 RGELSAGQLLKWIDTTACLAAEKHAGVSCVTASVDDIQFEETARVGQVITIKAKVTRAFSTSMEISIKVMVQDMLTGIEK 119 (333)
T ss_dssp TSBBCHHHHHHHHHHHHHHHHHHHHSSCEEEEEECCEECSCCCBTTEEEEEEEEEEEECSSEEEEEEEEEEEETTTCCEE
T ss_pred CCcEeHHHHHHHHHHHHHHHHHHHcCCceEEEEEeeEEEecCCCCCCEEEEEEEEEEecCceEEEEEEEEEecCCCCceE
Confidence 468999999988755442 222322334455 6899999998778999999999999999999999874 35
Q ss_pred eEEEEEEeccccCCCcccCccCCCCCCCCCCCCCHHHHHHhhcCCCCCchhhHhhhhccCCCCCCe-EEEEcCCCC----
Q 040957 230 IIFTLLASFQKEEQGFEHQETTMPLVPAPEMLLSMEELRERRLTDPRLPRSYRNKVASKEFVPWPI-DIRFCEPNS---- 304 (430)
Q Consensus 230 ~~~~~~~sf~~~~~~~~~~~~~~p~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-e~r~~~~~~---- 304 (430)
+++++.++|-.-+.. ....+.| +..+.-++-...+.. .......+.........-+ .........
T Consensus 120 ~~a~a~~t~V~vd~~--~kp~~vP-----~~~~~t~~e~~~~~~---a~~r~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (333)
T 3b7k_A 120 LVSVAFSTFVAKPVG--KEKIHLK-----PVTLLTEQDHVEHNL---AAERRKVRLQHEDTFNNLMKESSKFDDLIFDEE 189 (333)
T ss_dssp EEEEEEEEEEECCSC--C--CCCC-----CCCCCSHHHHHHHHH---HHHHHHHHHHCCCC-------------------
T ss_pred EEEEEEEEEEEECCC--CCccCCC-----CcCCCCHHHHHHHHH---HHHHHHHHHHhhhhhHHHhhhcccccccccccC
Confidence 677777776543211 1111122 222221110000000 0000000000000000000 000000000
Q ss_pred CCCCCCCCCeeEEEEecCCCCC-CChHHHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccCCCCCCCeEEeE
Q 040957 305 YTNQSKSPPSLRYWFRAKGKLS-DDQALHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFV 383 (430)
Q Consensus 305 ~~~~~~~~~~~~~W~R~~~~~~-~~~~~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~ 383 (430)
+......+.+....++..+..- .....|-..+.-+.|......+.... +.....+++| .|.|++|+..++++.++
T Consensus 190 ~~~~~~~~~~~~~~~~v~~~~~n~~G~v~GG~~~~~~D~a~~~~a~~~~---~~~~vtv~~~-~i~F~~Pv~~Gd~l~~~ 265 (333)
T 3b7k_A 190 EGAVSTRGTSVQSIELVLPPHANHHGNTFGGQIMAWMETVATISASRLC---WAHPFLKSVD-MFKFRGPSTVGDRLVFT 265 (333)
T ss_dssp ------CCCCEEEEEECCGGGBCTTCBBCHHHHHHHHHHHHHHHHHTSB---SSCCEEEEEC-CEECCSCCBTTCEEEEE
T ss_pred CCcccccCcEEEEEEEeChHHcCcCCcccHHHHHHHHHHHHHHHHHHHc---CCCcEEEEEe-eeEEcCcccCCCEEEEE
Confidence 0000122344444555442211 12233455555567764332222211 1222345555 79999999999999999
Q ss_pred EeecceeCCeeeEEEE--EEc------cCCCEEEEEecccee
Q 040957 384 IVSPVASKARGFVSGE--MFN------TKGELLVSLTQEALL 417 (430)
Q Consensus 384 ~~~~~~~~gr~~~~~~--i~~------~~G~lvA~~~Q~~l~ 417 (430)
++....++.......+ +++ .+++++|++.-.-+.
T Consensus 266 a~v~~~g~~s~~v~v~v~~~~~~~~~~~~~~~~a~a~~t~V~ 307 (333)
T 3b7k_A 266 AIVNNTFQTCVEVGVRVEAFDCQEWAEGRGRHINSAFLIYNA 307 (333)
T ss_dssp EEEEEEETTEEEEEEEEEEECHHHHHHTCCEEEEEEEEEEEC
T ss_pred EEEEEECCCEEEEEEEEEEEeccCCCCCcEEEEEEEEEEEEE
Confidence 9999998887776544 463 456788777655443
No 89
>3gek_A Putative thioesterase YHDA; structure genomics, NESG, KR113, Q9CHK5_lacla, lactococcus L YHDA, structural genomics, PSI-2; 2.24A {Lactococcus lactis subsp}
Probab=97.76 E-value=0.00015 Score=59.71 Aligned_cols=89 Identities=8% Similarity=-0.066 Sum_probs=68.6
Q ss_pred HHHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEE
Q 040957 330 ALHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLV 409 (430)
Q Consensus 330 ~~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA 409 (430)
.+|=.+++-++|..+...++.... .....+|++.+|.|.+|....+++..+.+....+.-....++++||++|++||
T Consensus 46 ~vHGG~l~tLaD~a~g~a~~~~~~---~~~~~vT~~l~i~flrpa~~~g~l~a~a~v~~~Gr~~~~~~v~i~d~~g~lvA 122 (146)
T 3gek_A 46 FLNGGASLALAEITAGMASNAIGS---GQYFAFGQSINANHLNPKKCEGFVNARGLLLKNGKRNHVWEIKITDENETLIS 122 (146)
T ss_dssp BBCHHHHHHHHHHHHHHHHHHHHT---TSCEEEEEEEEEEECSCCBSSSEEEEEEEEEEECSSEEEEEEEEEETTCCEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcC---CCCcEEEEEEEEEEcccCCCCcEEEEEEEEEECCCcEEEEEEEEEeCCCCEEE
Confidence 456667888899754332221111 11257899999999998776679999999999999999999999999999999
Q ss_pred EEeccceeccCC
Q 040957 410 SLTQEALLRSPK 421 (430)
Q Consensus 410 ~~~Q~~l~r~~~ 421 (430)
+++...++++++
T Consensus 123 ~a~~t~~i~~~~ 134 (146)
T 3gek_A 123 QITVVNALVPQK 134 (146)
T ss_dssp EEEEEEEEEC--
T ss_pred EEEEEEEEeCcc
Confidence 999999988765
No 90
>2f3x_A Transcription factor FAPR; 'HOT-DOG' fold / malonyl-COA complex, gene regulation; HET: MLC; 3.10A {Bacillus subtilis} SCOP: d.38.1.5
Probab=97.75 E-value=0.00024 Score=59.22 Aligned_cols=81 Identities=14% Similarity=0.071 Sum_probs=64.1
Q ss_pred CCceeehhHHHHHHHHHHhccCCCCC-cceeeeeeeccCcCCCCCeEEEEEEe--eeCCCeeEEEEEEEECCeeEEEEEE
Q 040957 160 KFGKVFGGQLVGQALAAASKTVDCLK-IVHSLHCYFLLVGDLNIPIIYQVHRV--RDGNSFATRRVDAIQKGNIIFTLLA 236 (430)
Q Consensus 160 ~~~~~~GG~~~a~al~Aa~~~~~~~~-~~~s~~~~Fl~~~~~~~pi~~~V~~l--r~Gr~~s~~~V~~~Q~g~~~~~~~~ 236 (430)
..+.++||.++||+-.++....+... ......+.|++|+.++..+..+++.+ +..++.....++++|+|++++.+++
T Consensus 70 ~~gi~hGg~~~a~ad~~~~~~~~~~~~~t~~~~i~F~rPV~~GD~L~a~a~v~~~~~~~~~~~v~~~~~~~g~~V~~g~~ 149 (157)
T 2f3x_A 70 RNQIARGHHLFAQANSLAVAVIDDELALTASADIRFTRQVKQGERVVAKAKVTAVEKEKGRTVVEVNSYVGEEIVFSGRF 149 (157)
T ss_dssp TTCBBCHHHHHHHHHHHHHHTSCSSCCEEEEEEEEECSCCBTTCEEEEEEEEEEEETGGGEEEEEEEEEETTEEEEEEEE
T ss_pred CCCEEcHHHHHHHHHHHHHHHcCCceEEEEEEEEEEeCCCCCCCEEEEEEEEEEEEccCCEEEEEEEEEECCEEEEEEEE
Confidence 45589999999998776655554222 23345899999999976799999999 8888888999999999999998888
Q ss_pred eccc
Q 040957 237 SFQK 240 (430)
Q Consensus 237 sf~~ 240 (430)
.+..
T Consensus 150 ~~~~ 153 (157)
T 2f3x_A 150 DMYR 153 (157)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 7644
No 91
>3hdu_A Putative thioesterase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 2.50A {Syntrophus aciditrophicus SB}
Probab=97.75 E-value=3.3e-05 Score=64.64 Aligned_cols=78 Identities=21% Similarity=0.208 Sum_probs=62.3
Q ss_pred CceeehhHHHHHHHHHHhccC----CC---------------CCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEE
Q 040957 161 FGKVFGGQLVGQALAAASKTV----DC---------------LKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRR 221 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~~----~~---------------~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~ 221 (430)
.+.+|||.+++++=.|+...+ ++ ...-.+++++|++|+. +.++..+.+.+|.||+....+
T Consensus 58 ~G~~HGG~iatl~D~a~g~a~~~~~~~~~~~~~~~~~~~~~~~~vT~~l~i~ylrp~~-g~~l~a~a~v~~~gr~~~~~~ 136 (157)
T 3hdu_A 58 RRMLYGGVISSAIDMTAGLAAFMGFQEKMSGKPMEEKLAMIGRLSTMSLHVEYLRPGL-GREFVCTGYNVRTGNKVAVIR 136 (157)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSCHHHHHHHGGGEEEEEEEEEESSCCC-CSEEEEEEEEEEECSSEEEEE
T ss_pred CCeEcHHHHHHHHHHHHHHHHHhhCccccccccccccccccCceEEEEEEEEEECCCC-CCeEEEEEEEEEcCCeEEEEE
Confidence 358999999987744332211 11 1134579999999998 688999999999999999999
Q ss_pred EEEEEC-CeeEEEEEEecc
Q 040957 222 VDAIQK-GNIIFTLLASFQ 239 (430)
Q Consensus 222 V~~~Q~-g~~~~~~~~sf~ 239 (430)
++++++ |+++++++++|.
T Consensus 137 ~~i~~~~g~lvA~a~~t~~ 155 (157)
T 3hdu_A 137 TELMNDQDELIAVGSVSYI 155 (157)
T ss_dssp EEEEETTCCEEEEEEEEEE
T ss_pred EEEEeCCCcEEEEEEEEEE
Confidence 999997 899999999884
No 92
>2ov9_A Hypothetical protein; rhodococcus SP. RHA1, RHA08564, structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Rhodococcus SP} SCOP: d.38.1.5
Probab=97.69 E-value=0.00015 Score=63.85 Aligned_cols=80 Identities=14% Similarity=0.045 Sum_probs=63.8
Q ss_pred ceeehhHHHHHHHHHH---hccCCCCCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEE-ECCeeEEEEEEe
Q 040957 162 GKVFGGQLVGQALAAA---SKTVDCLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAI-QKGNIIFTLLAS 237 (430)
Q Consensus 162 ~~~~GG~~~a~al~Aa---~~~~~~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~-Q~g~~~~~~~~s 237 (430)
+.+|||.+++++=.++ .........-.++++.|++|+..+.++.++.+.++.||+.....++++ ++|+++.++.++
T Consensus 127 G~vHGG~latLlD~a~g~a~~~~g~~~vT~~l~v~flrPv~~G~~l~~~a~V~~~g~r~~~v~~~i~~~~G~lvA~a~~t 206 (216)
T 2ov9_A 127 GHVHGGVSALLLDHVLGVANAWGGKAGMTAQLSTRYHRPTPLFEPLTLTGKLMSVDGRKITTAGDIRTADGQVCVSVEGL 206 (216)
T ss_dssp TBBCHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEEECSCCBSSSEEEEEEEEEEEETTEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEhHHHHHHHHHHHHHHHHHhcCCceEEEEEEEEEecCCCCCCEEEEEEEEEEeCCCEEEEEEEEEECCCcEEEEEEEE
Confidence 5899999998853322 222233345667899999999987789999999999999999999999 689999999998
Q ss_pred cccc
Q 040957 238 FQKE 241 (430)
Q Consensus 238 f~~~ 241 (430)
|...
T Consensus 207 ~v~~ 210 (216)
T 2ov9_A 207 FVDK 210 (216)
T ss_dssp EEC-
T ss_pred EEEe
Confidence 8654
No 93
>1sc0_A Hypothetical protein HI1161; structural genomics, unknown function, PSI-2, protein structure initiative; 1.70A {Haemophilus influenzae} SCOP: d.38.1.5 PDB: 2b6e_A 3lz7_A
Probab=97.67 E-value=0.00046 Score=56.20 Aligned_cols=102 Identities=10% Similarity=-0.081 Sum_probs=70.1
Q ss_pred eeEEEEecCCCCCC-ChHHHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEeecceeCC
Q 040957 314 SLRYWFRAKGKLSD-DQALHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKA 392 (430)
Q Consensus 314 ~~~~W~R~~~~~~~-~~~~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~g 392 (430)
....-+.+++..-+ ...+|=.+++-++|..+-..+.... ......+|+|.++.|.+|... +.+..+.+..+.+.-
T Consensus 35 ~~~~~~~v~~~~~n~~G~~HGG~~~~l~D~a~~~a~~~~~---~~~~~~vt~~l~i~flrpa~~-g~l~a~a~v~~~Gr~ 110 (138)
T 1sc0_A 35 WIEATMPVDHRTMQPFGVLHGGVSVALAETIGSLAGSLCL---EEGKTVVGLDINANHLRPVRS-GKVTARATPINLGRN 110 (138)
T ss_dssp CEEEEEECSTTTBCTTSSBCHHHHHHHHHHHHHHHHHHTS---CTTCEEEEEEEEEEECSCCCS-SEEEEEEEEEEECSS
T ss_pred EEEEEEEcCHHHcCCCCcCcHHHHHHHHHHHHHHHHHHhC---CCCceeeeeEEEEEEEccCCC-CcEEEEEEEEEcCCC
Confidence 34444444443321 2345667788889975322222111 122357899999999997664 578888888888888
Q ss_pred eeeEEEEEEccCCCEEEEEeccceecc
Q 040957 393 RGFVSGEMFNTKGELLVSLTQEALLRS 419 (430)
Q Consensus 393 r~~~~~~i~~~~G~lvA~~~Q~~l~r~ 419 (430)
-+..++++||++|+|||+++...++.+
T Consensus 111 ~~~~~~~i~d~~g~lvA~a~~T~~il~ 137 (138)
T 1sc0_A 111 IQVWQIDIRTEENKLCCVSRLTLSVIN 137 (138)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEEEEEC
T ss_pred EEEEEEEEEcCCCCEEEEEEEEEEEEe
Confidence 889999999999999999998876643
No 94
>2prx_A Thioesterase superfamily protein; ZP_00837258.1, structural joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.50A {Shewanella loihica}
Probab=97.64 E-value=0.00018 Score=60.28 Aligned_cols=80 Identities=10% Similarity=0.036 Sum_probs=60.1
Q ss_pred ceeehhHHHHHHHHH-----HhccC---C---------CCCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEE
Q 040957 162 GKVFGGQLVGQALAA-----ASKTV---D---------CLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDA 224 (430)
Q Consensus 162 ~~~~GG~~~a~al~A-----a~~~~---~---------~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~ 224 (430)
+.+|||.+++++=.+ +.... . ......++++.|++|+.++..++++.+.++.||+....++++
T Consensus 55 G~vhGG~~~~l~D~~~~g~a~~~~~~~~g~~~~~~~~~~~~vt~~~~i~f~~pv~~gd~l~~~a~v~~~g~~~~~~~~~i 134 (160)
T 2prx_A 55 GFVYGGLIASLIDCHGTGSASAAAQRALEQAGEQLDEPPRFVTAALNIDYLAPTPMGVELELVGEIKEVKPRKVVVEIAL 134 (160)
T ss_dssp TBBCHHHHHHHHHHHHHHHHHHHHC-------------CCEEEEEEEEEECSCCBTTSCEEEEEEEEEC--CEEEEEEEE
T ss_pred CceeHHHHHHHHHhhhhHHHHHHHHhhcccccccccCceEEEEEEEEEEEecCcCCCCEEEEEEEEEEecCCEEEEEEEE
Confidence 589999999887542 22111 0 134466789999999998888999999999999999999999
Q ss_pred EECCeeEEEEEEecccc
Q 040957 225 IQKGNIIFTLLASFQKE 241 (430)
Q Consensus 225 ~Q~g~~~~~~~~sf~~~ 241 (430)
+++|++++.+.++|...
T Consensus 135 ~~~g~~va~a~~~~~~~ 151 (160)
T 2prx_A 135 SADGKLCARGHMVAVKM 151 (160)
T ss_dssp EC---CCEEEEEEEEEC
T ss_pred EECCEEEEEEEEEEEEE
Confidence 99999999999988654
No 95
>4a0z_A Transcription factor FAPR; lipid homeostasis; HET: MLC; 1.90A {Staphylococcus aureus} PDB: 4a0y_A 4a0x_A* 4a12_A
Probab=97.49 E-value=0.00076 Score=57.97 Aligned_cols=76 Identities=17% Similarity=0.108 Sum_probs=66.0
Q ss_pred ceeehhHHHHHHHHHHhccCCCCCc-ceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEECCeeEEEEEEe
Q 040957 162 GKVFGGQLVGQALAAASKTVDCLKI-VHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKGNIIFTLLAS 237 (430)
Q Consensus 162 ~~~~GG~~~a~al~Aa~~~~~~~~~-~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~g~~~~~~~~s 237 (430)
+-++||++.++|=.+|...++.... -.++++.|++|+.++..+..+.+.++.+++.....|+++.+++.+|.+.+.
T Consensus 107 givhGg~lfalAds~a~a~~n~~~aVT~~~~I~fl~Pv~~Gd~Lva~A~v~~~~gr~~~v~V~i~~~d~~Vf~G~F~ 183 (190)
T 4a0z_A 107 GIARGHVLFAQANSLCVALIKQPTVLTHESSIQFIEKVKLNDTVRAEARVVNQTAKHYYVEVKSYVKHTLVFKGNFK 183 (190)
T ss_dssp CBBCHHHHHHHHHHHHHHHSCSSEEEEEEEEEEECSCCBTTCEEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEE
T ss_pred CcccccchHHHHHHHHhhcccCceeEeeehhhhhcccCCCCCEEEEEEEEEEeCCCEEEEEEEEEECCEEEEEEEEE
Confidence 5789999999998888877764332 456899999999998889999999999999999999999999999988755
No 96
>1vh9_A P15, hypothetical protein YBDB; structural genomics, unknown function; 2.15A {Escherichia coli} SCOP: d.38.1.5
Probab=97.48 E-value=0.0013 Score=54.24 Aligned_cols=88 Identities=10% Similarity=-0.025 Sum_probs=66.7
Q ss_pred HHHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEE
Q 040957 330 ALHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLV 409 (430)
Q Consensus 330 ~~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA 409 (430)
.+|-..++-++|..+...+.... .......|++.+|.|.+|.+.+ ++..+.+....+......++++||++|+++|
T Consensus 54 ~vhGG~l~~l~D~a~~~a~~~~~---~~~~~~vt~~l~i~fl~p~~~G-~l~a~a~v~~~gr~~~~~~~~v~~~~g~lvA 129 (149)
T 1vh9_A 54 LLHGGASAALAETLGSMAGFMMT---RDGQCVVGTELNATHHRPVSEG-KVRGVCQPLHLGRQNQSWEIVVFDEQGRRCC 129 (149)
T ss_dssp SBCHHHHHHHHHHHHHHHHHTTC---CTTCCEEEEEEEEEECSCCCSS-EEEEEEEEEEECSSEEEEEEEEECTTSCEEE
T ss_pred cChHHHHHHHHHHHHHHHHHhhc---CCCCeEEEEEEEEEEEcCCCCc-EEEEEEEEEECCCCEEEEEEEEEeCCCCEEE
Confidence 45666778888975433332211 1112467889999999988877 9999999999999999999999999999999
Q ss_pred EEeccceeccCC
Q 040957 410 SLTQEALLRSPK 421 (430)
Q Consensus 410 ~~~Q~~l~r~~~ 421 (430)
++.-.-++..++
T Consensus 130 ~a~~t~~~~~~~ 141 (149)
T 1vh9_A 130 TCRLGTAVLGEG 141 (149)
T ss_dssp EEEEEEEECC--
T ss_pred EEEEEEEEecCC
Confidence 999887777654
No 97
>3s4k_A Putative esterase RV1847/MT1895; seattle structural genomics center for infectious disease, S hydrolase; 1.70A {Mycobacterium tuberculosis} SCOP: d.38.1.0
Probab=97.46 E-value=0.00045 Score=56.71 Aligned_cols=91 Identities=9% Similarity=0.008 Sum_probs=68.1
Q ss_pred HHHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEE
Q 040957 330 ALHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLV 409 (430)
Q Consensus 330 ~~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA 409 (430)
.+|-.+++-++|..+...+.......+......|++.+|.|++|...+ ++..+.+....+......+++|||++|++||
T Consensus 53 ~vHGG~l~tl~D~a~~~a~~~~~~~~~~~~~~vt~~l~i~fl~p~~~g-~l~~~a~v~~~gr~~~~~~~~i~~~~g~lvA 131 (144)
T 3s4k_A 53 VVHGGVYCAMIESIASMAAFAWLNSHGEGGSVVGVNNNTDFVRSISSG-MVYGTAEPLHRGRRQQLWLVTITDDTDRVVA 131 (144)
T ss_dssp SBCHHHHHHHHHHHHHHHHHHHHTC--CCCEEEEEEEEEEECCCCCSE-EEEEEEEEEEECSSEEEEEEEEECTTSCEEE
T ss_pred cChHHHHHHHHHHHHHHHHHhhcccccCCceeEEEEEEEEEECCCCCC-EEEEEEEEEEcCCCEEEEEEEEEcCCCCEEE
Confidence 456677888999754333321110001123578999999999988776 9999999999988889999999999999999
Q ss_pred EEeccceeccCC
Q 040957 410 SLTQEALLRSPK 421 (430)
Q Consensus 410 ~~~Q~~l~r~~~ 421 (430)
+++-.-++.+++
T Consensus 132 ~a~~t~~~~~~~ 143 (144)
T 3s4k_A 132 RGQVRLQNLEAR 143 (144)
T ss_dssp EEEEEEEEECCC
T ss_pred EEEEEEEEecCC
Confidence 999887777654
No 98
>1yoc_A Hypothetical protein PA1835; structural genomics, PSI, protein structure initiati midwest center for structural genomics, MCSG, sulfur SAD; 1.70A {Pseudomonas aeruginosa} SCOP: d.38.1.5
Probab=97.44 E-value=0.00029 Score=58.09 Aligned_cols=78 Identities=14% Similarity=0.048 Sum_probs=62.3
Q ss_pred CceeehhHHHHHHHHHHh----ccCCCCC--cceeeeeeeccCcCCCCCeEEEEEEeeeC---CCeeEEEEEEEECCeeE
Q 040957 161 FGKVFGGQLVGQALAAAS----KTVDCLK--IVHSLHCYFLLVGDLNIPIIYQVHRVRDG---NSFATRRVDAIQKGNII 231 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~----~~~~~~~--~~~s~~~~Fl~~~~~~~pi~~~V~~lr~G---r~~s~~~V~~~Q~g~~~ 231 (430)
.+.+|||.+++++=.|+. ...+++. ...+++++|++|+. +.+..+.+.++.| |+....+++++++++++
T Consensus 58 ~G~vHGG~i~tLaD~a~g~a~~~~~~~~~~~vt~~l~i~ylrp~~--g~l~a~a~v~~~g~~~r~~~~~~~~v~~~~~lv 135 (147)
T 1yoc_A 58 IGTVHAIALCNAAELAAGTMTDASIPAGHRWIPRGMTVEYLAKAT--GDVRAVADGSQIDWQATGNLVVPVVAYVDDKPV 135 (147)
T ss_dssp TSSBCHHHHHHHHHHHHHHHHHHHSCTTEEEEEEEEEEEECSCCC--SCEEEEEECTTSCTTCCEEEEEEEEEEETTEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHhccCCCCCcEEEEEEEEEEeccCC--CcEEEEEEEcccccccceEEEEEEEEEECCEEE
Confidence 458999999988744432 2334333 25678999999998 5899999999999 99999999999988889
Q ss_pred EEEEEeccc
Q 040957 232 FTLLASFQK 240 (430)
Q Consensus 232 ~~~~~sf~~ 240 (430)
+.++++|-.
T Consensus 136 A~a~~t~~v 144 (147)
T 1yoc_A 136 FRAEITMYV 144 (147)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEE
Confidence 988887754
No 99
>3dkz_A Thioesterase superfamily protein; Q7W9W5, borpa, PF03061, NESG, BPR208C, structural genomics, PSI-2, protein structure initiative; 2.40A {Bordetella parapertussis}
Probab=97.43 E-value=0.0011 Score=54.13 Aligned_cols=88 Identities=17% Similarity=0.218 Sum_probs=66.9
Q ss_pred HHHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEE
Q 040957 330 ALHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLV 409 (430)
Q Consensus 330 ~~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA 409 (430)
.+|-.+++-++|..+...+.... .. ....+++.+|.|.+|.. ++ +..+.+....+......++++||++|+++|
T Consensus 47 ~vhGG~l~~l~D~a~~~a~~~~~--~~--~~~vt~~l~i~fl~p~~-g~-l~~~a~v~~~gr~~~~~~~~v~~~~g~lva 120 (142)
T 3dkz_A 47 DIHGGTLMSVLDFTLGAAIRGDT--PE--VGVATIDMNTSFMSPGR-GD-LVIETRCLRRGASIAFCEGEIRDSAGELVA 120 (142)
T ss_dssp SBCHHHHHHHHHHHHHHTTTTSC--TT--SCEEEEEEEEEECSCCC-SC-EEEEEEEEEECSSEEEEEEEEEETTCCEEE
T ss_pred cCHHHHHHHHHHHHHHHHHHhhC--CC--CceEEEEEEEEEecCCC-Ce-EEEEEEEEEcCCcEEEEEEEEEeCCCCEEE
Confidence 35666788888975433332221 11 45789999999999888 77 999999999999999999999999999999
Q ss_pred EEeccceeccCCCC
Q 040957 410 SLTQEALLRSPKPK 423 (430)
Q Consensus 410 ~~~Q~~l~r~~~~~ 423 (430)
.+.-.-++..++.+
T Consensus 121 ~a~~t~~~~~~~~~ 134 (142)
T 3dkz_A 121 KATATFKIIQRRPG 134 (142)
T ss_dssp EEEEEEEECC----
T ss_pred EEEEEEEEecCCCC
Confidence 99998888776543
No 100
>4i82_A Putative uncharacterized protein; PAAI/YDII-like, hot DOG fold, thioesterase, hydrolase; 2.50A {Streptococcus pneumoniae}
Probab=97.42 E-value=0.00083 Score=54.53 Aligned_cols=86 Identities=15% Similarity=0.151 Sum_probs=68.9
Q ss_pred HHHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEE
Q 040957 330 ALHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLV 409 (430)
Q Consensus 330 ~~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA 409 (430)
.+|-..++-++|..+...+.. + + ....+++.++.|++|...++++..+.+....+......++++||++|+++|
T Consensus 44 ~vhGG~l~~l~D~a~~~a~~~-~---~--~~~vt~~l~i~fl~p~~~g~~l~~~a~v~~~g~~~~~~~~~v~~~~g~lva 117 (137)
T 4i82_A 44 NAHGGYLFTLCDQISGLVVIS-L---G--LDGVTLQSSINYLKAGKLDDVLTIKGECVHQGRTTCVMDVDITNQEGRNVC 117 (137)
T ss_dssp BBCHHHHHHHHHHHHHHHHHT-T---T--CEEEEEEEEEEECSCCBTTCEEEEEEEEEEECSSEEEEEEEEECTTSCEEE
T ss_pred CChHHHHHHHHHHHHHHHHHh-c---C--CCeEEEEEEEEEecccCCCCEEEEEEEEEEeCCcEEEEEEEEEcCCCcEEE
Confidence 456667777889754333332 2 1 246788999999999999999999999999999999999999999999999
Q ss_pred EEeccceeccCC
Q 040957 410 SLTQEALLRSPK 421 (430)
Q Consensus 410 ~~~Q~~l~r~~~ 421 (430)
++.-.-++..++
T Consensus 118 ~a~~t~~~~~~~ 129 (137)
T 4i82_A 118 KATFTMFVTGQR 129 (137)
T ss_dssp EEEEEEEEEEC-
T ss_pred EEEEEEEEECCC
Confidence 999887777654
No 101
>1o0i_A Hypothetical protein HI1161; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.70A {Haemophilus influenzae} PDB: 1sc0_A 2b6e_A 3lz7_A
Probab=97.41 E-value=0.0015 Score=52.97 Aligned_cols=86 Identities=12% Similarity=-0.063 Sum_probs=65.9
Q ss_pred hHHHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEE
Q 040957 329 QALHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELL 408 (430)
Q Consensus 329 ~~~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lv 408 (430)
..+|-..++-++|..+...+.... .......+++.++.|.+|.+.+ ++..+.+....+......+++++|++|+++
T Consensus 51 G~~hGG~l~~l~D~a~~~a~~~~~---~~~~~~vt~~l~i~fl~p~~~g-~l~~~a~v~~~gr~~~~~~~~i~~~~g~lv 126 (138)
T 1o0i_A 51 GVLHGGVSVALAETIGSLAGSLCL---EEGKTVVGLDINANHLRPVRSG-KVTARATPINLGRNIQVWQIDIRTEENKLC 126 (138)
T ss_dssp SSBCHHHHHHHHHHHHHHHHHHTS---CTTEEEEEEEEEEEECSCCCSS-EEEEEEEEEEECSSEEEEEEEEECTTSCEE
T ss_pred CccHHHHHHHHHHHHHHHHHhhhc---CCCceEEEEEEEEEEEccCCCc-EEEEEEEEEECCCcEEEEEEEEEeCCCcEE
Confidence 345667788889975433322211 1123578999999999988877 999999999999999999999999999999
Q ss_pred EEEeccceec
Q 040957 409 VSLTQEALLR 418 (430)
Q Consensus 409 A~~~Q~~l~r 418 (430)
|+++-.-++.
T Consensus 127 A~a~~t~~i~ 136 (138)
T 1o0i_A 127 CVSRLTLSVI 136 (138)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEEEEE
Confidence 9998776553
No 102
>3lbe_A Putative uncharacterized protein SMU.793; hypothetical protein, unknown function; HET: COA; 1.70A {Streptococcus mutans} PDB: 3lbb_A*
Probab=97.33 E-value=0.0011 Score=55.68 Aligned_cols=86 Identities=16% Similarity=0.093 Sum_probs=69.2
Q ss_pred HHHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEE
Q 040957 330 ALHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLV 409 (430)
Q Consensus 330 ~~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA 409 (430)
.+|-..++-++|..+...+.. . .....|++.+|.|.+|+..++++..+.+....+......++++||++|++||
T Consensus 75 ~vHGG~l~tl~D~a~g~a~~~-~-----g~~~vT~~l~i~flrpv~~G~~l~a~a~v~~~gr~~~~~~~~i~~~~g~lvA 148 (163)
T 3lbe_A 75 FAHGGYIFTLCDQISGLVSIS-T-----GFDAVTLQSSINYLKSGKLGDTLLIDGRCVHDGRTTKVVDVTVTNQLKQEVA 148 (163)
T ss_dssp SBCHHHHHHHHHHHHHHHHHH-T-----TEEEEEEEEEEEECSCCCTTCEEEEEEEEEEECSSEEEEEEEEECTTCCEEE
T ss_pred cCHHHHHHHHHHHHHHHHHHh-c-----CCcEEEEEEEEEEecCCCCCCEEEEEEEEEEcCCcEEEEEEEEEeCCCCEEE
Confidence 346667778889754333222 2 1347889999999999988899999999999999999999999999999999
Q ss_pred EEeccceeccCC
Q 040957 410 SLTQEALLRSPK 421 (430)
Q Consensus 410 ~~~Q~~l~r~~~ 421 (430)
+++-..++..++
T Consensus 149 ~a~~t~~~~~~~ 160 (163)
T 3lbe_A 149 KATFTMFVTGKR 160 (163)
T ss_dssp EEEEEEEEEEEC
T ss_pred EEEEEEEEcCCC
Confidence 999988877654
No 103
>3nwz_A BH2602 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, unknown FUN; HET: COA; 2.57A {Bacillus halodurans}
Probab=97.32 E-value=0.0019 Score=54.91 Aligned_cols=90 Identities=13% Similarity=0.132 Sum_probs=67.7
Q ss_pred hHHHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEE
Q 040957 329 QALHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELL 408 (430)
Q Consensus 329 ~~~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lv 408 (430)
..+|-.+++-++|..+...+.... .......+++.+|.|.+|.. ++++..+++....+......++++|+++|++|
T Consensus 79 G~vhGG~l~tl~D~a~~~a~~~~~---~~~~~~vt~~l~i~fl~P~~-g~~l~~~a~v~~~gr~~~~~~~~v~~~~g~lv 154 (176)
T 3nwz_A 79 NMVHGGITATLLDTAMGQMVNRQL---PDGQSAVTSELNIHYVKPGM-GTYLRAVASIVHQGKQRIVVEGKVYTDQGETV 154 (176)
T ss_dssp SSBCHHHHHHHHHHHHHHHHHHTS---CTTCCEEEEEEEEEECSCCC-SSEEEEEEEEEEECSSEEEEEEEEECTTSCEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhC---CCCCcEEEEEEEEEEEccCC-CCEEEEEEEEEEeCCCEEEEEEEEEeCCCcEE
Confidence 345667788888965333222211 11234778999999999988 89999999999999999999999999999999
Q ss_pred EEEeccceeccCCC
Q 040957 409 VSLTQEALLRSPKP 422 (430)
Q Consensus 409 A~~~Q~~l~r~~~~ 422 (430)
|.+.-.-++.+++.
T Consensus 155 A~a~~t~~v~~~~~ 168 (176)
T 3nwz_A 155 AMGTGSFFVLRSRG 168 (176)
T ss_dssp EEEEEEEEEC----
T ss_pred EEEEEEEEEeCCCc
Confidence 99999888887654
No 104
>3f1t_A Uncharacterized protein Q9I3C8_pseae; PAR319A, NESG, structural genomics, PSI-2, Pro structure initiative; HET: MSE; 2.20A {Pseudomonas aeruginosa}
Probab=97.31 E-value=0.001 Score=54.83 Aligned_cols=89 Identities=8% Similarity=-0.017 Sum_probs=68.4
Q ss_pred hHHHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccC-CCE
Q 040957 329 QALHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTK-GEL 407 (430)
Q Consensus 329 ~~~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~-G~l 407 (430)
..+|=.+++-++|..+-..++... +......|++.+|.|.+|...++++..+.+....+.-....+++||++| |++
T Consensus 52 G~vHGG~latl~D~a~g~a~~~~~---~~~~~~vT~~l~v~flrp~~~G~~l~a~a~v~~~gr~~~~~~~~i~~~~~g~l 128 (148)
T 3f1t_A 52 GVVHGGAITTLMDTTCGISTVCVL---PDFEICPTLDLRIDYMHPAEPHKDVYGFAECYRVTPNVIFTRGFAYQDDPGQP 128 (148)
T ss_dssp CCBCHHHHHHHHHHHHHHHGGGTC---SSCCCCCEEEEEEEECSCCCTTSCEEEEEEEEEECSSEEEEEEEEESSCTTSC
T ss_pred CcCcHHHHHHHHHHHHHHHHHHhC---CCCCceEEEEEEEEEecCCCCCCEEEEEEEEEeccCcEEEEEEEEEECCCCcE
Confidence 345667788899975433333221 1123467999999999998888899999999999999999999999996 999
Q ss_pred EEEEeccceeccC
Q 040957 408 LVSLTQEALLRSP 420 (430)
Q Consensus 408 vA~~~Q~~l~r~~ 420 (430)
||+++-.-++...
T Consensus 129 vA~a~~t~~~~~~ 141 (148)
T 3f1t_A 129 IAHVVGAFMRMGL 141 (148)
T ss_dssp SEEEEEEEECC--
T ss_pred EEEEEEEEEeccc
Confidence 9999987766643
No 105
>3d6l_A Putative hydrolase; hot DOG fold, thioesterase, acyl-COA; 2.59A {Campylobacter jejuni}
Probab=97.28 E-value=0.0011 Score=53.61 Aligned_cols=81 Identities=17% Similarity=0.120 Sum_probs=62.5
Q ss_pred CceeehhHHHHHHHHHHhc----cCCCCCcceee-eeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEEC--------
Q 040957 161 FGKVFGGQLVGQALAAASK----TVDCLKIVHSL-HCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQK-------- 227 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~----~~~~~~~~~s~-~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~-------- 227 (430)
.+.+|||.++..+-.|+.. .........++ ++.|++|...+..+.++++.++.||+.....++++.+
T Consensus 21 ~G~v~gg~~~~~~d~a~~~~~~~~~~~~~vt~~~~~i~f~~pv~~gd~l~v~~~v~~~g~~s~~~~~~i~~~~~~~~~~g 100 (137)
T 3d6l_A 21 AGNIFGGWILSQIDLAGAIAARELSPERVVTISMDKVVFKEPVFIGDIISCYSKVVNVGNTSISVEVEVTAQRVDSQGCT 100 (137)
T ss_dssp TSSBCHHHHHHHHHHHHHHHHHTSSSSEEEEEEEEEEECCSCCCTTCEEEEEEEEEEECSSEEEEEEEEEEEEECTTSCE
T ss_pred CCeEEHHHHHHHHHHHHHHHHHHhCCCCEEEEEECcEEEeCCccCCCEEEEEEEEEEeCCcEEEEEEEEEEccCcccccC
Confidence 4589999999887655422 22223456788 4999999998778999999999999999999999875
Q ss_pred -CeeEEEEEEecccc
Q 040957 228 -GNIIFTLLASFQKE 241 (430)
Q Consensus 228 -g~~~~~~~~sf~~~ 241 (430)
+++++.+.++|-.-
T Consensus 101 ~~~~~a~a~~t~v~~ 115 (137)
T 3d6l_A 101 SCINVTSALVTYVSV 115 (137)
T ss_dssp EEEEEEEEEEEEEEE
T ss_pred ceEEEEEEEEEEEEE
Confidence 46777887777543
No 106
>4ien_A Putative acyl-COA hydrolase; hot DOG fold; HET: COA GDP; 2.00A {Neisseria meningitidis}
Probab=97.28 E-value=0.0017 Score=54.51 Aligned_cols=83 Identities=11% Similarity=0.008 Sum_probs=62.3
Q ss_pred CCceeehhHHHHHHHHHHhc----cCCCCCcceee-eeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEECC------
Q 040957 160 KFGKVFGGQLVGQALAAASK----TVDCLKIVHSL-HCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKG------ 228 (430)
Q Consensus 160 ~~~~~~GG~~~a~al~Aa~~----~~~~~~~~~s~-~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~g------ 228 (430)
..+.+|||.++.++=.|+.. .........++ +++|++|...+..+.++.+.++.||+.....++++.++
T Consensus 28 ~~G~v~GG~l~~~~D~a~~~~a~~~~~~~~vt~~~~~i~F~~Pv~~gd~l~v~a~v~~~Grss~~v~~~v~~~~~~~g~~ 107 (163)
T 4ien_A 28 FSGNVHGGELLLLLDQVAYSCASRYSGNYCVTLSVDKVLFKEPIHIGDLVTFYAAVNYTGRTSMEIGIRVEAQNIRTGEI 107 (163)
T ss_dssp TTSBBCHHHHHHHHHHHHHHHHHHHHTSCEEEEEEECEECCSCCBTTCEEEEEEEEEEECSSEEEEEEEEEEECTTTCCE
T ss_pred CCCcCcHHHHHHHHHHHHHHHHHHHhCCcEEEEEEeeEEEeCcCCCCCEEEEEEEEEEccCCEEEEEEEEEEecCCCCcE
Confidence 34689999999887555432 22222334456 59999999988889999999999999999999998743
Q ss_pred eeEEEEEEeccccC
Q 040957 229 NIIFTLLASFQKEE 242 (430)
Q Consensus 229 ~~~~~~~~sf~~~~ 242 (430)
++++++.++|-.-+
T Consensus 108 ~~~a~a~~t~V~vd 121 (163)
T 4ien_A 108 RHTNSCYFTMVAVK 121 (163)
T ss_dssp EEEEEEEEEEEEEE
T ss_pred EEEEEEEEEEEEcC
Confidence 57777777775543
No 107
>1vh5_A Hypothetical protein YDII; PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; 1.34A {Escherichia coli} SCOP: d.38.1.5 PDB: 1vi8_A 1sbk_A
Probab=97.27 E-value=0.0031 Score=51.84 Aligned_cols=88 Identities=17% Similarity=0.032 Sum_probs=66.2
Q ss_pred HHHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEE
Q 040957 330 ALHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLV 409 (430)
Q Consensus 330 ~~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA 409 (430)
.+|-..++-++|..+...+.... .......+++.++.|.+|.+.+ ++..+.+....+......++++||++|++||
T Consensus 54 ~vhGG~l~~l~D~a~~~a~~~~~---~~~~~~vt~~l~i~fl~p~~~G-~l~a~a~v~~~gr~~~~~~~~v~~~~g~lvA 129 (148)
T 1vh5_A 54 LLHGGASVVLAESIGSVAGYLCT---EGEQKVVGLEINANHVRSAREG-RVRGVCKPLHLGSRHQVWQIEIFDEKGRLCC 129 (148)
T ss_dssp SBCHHHHHHHHHHHHHHHHHHTS---CTTCEEEEEEEEEEECSCCCSS-EEEEEEEEEEECSSEEEEEEEEECTTSCEEE
T ss_pred cChHHHHHHHHHHHHHHHHHhhc---CCCCcEEEEEEEEEEEcCCCCC-EEEEEEEEEEcCCCEEEEEEEEEeCCCCEEE
Confidence 34666777788875432222111 1113477899999999988877 9999999999999999999999999999999
Q ss_pred EEeccceeccCC
Q 040957 410 SLTQEALLRSPK 421 (430)
Q Consensus 410 ~~~Q~~l~r~~~ 421 (430)
++.-.-++..++
T Consensus 130 ~a~~t~~~~~~~ 141 (148)
T 1vh5_A 130 SSRLTTAILEGG 141 (148)
T ss_dssp EEEEEEEEEC--
T ss_pred EEEEEEEEecCc
Confidence 999877776554
No 108
>4ae8_A Thioesterase superfamily member 4; hydrolase, hotdog-fold; 1.59A {Homo sapiens} PDB: 4gah_A*
Probab=97.27 E-value=0.00084 Score=58.72 Aligned_cols=81 Identities=10% Similarity=0.001 Sum_probs=62.7
Q ss_pred CceeehhHHHHHHHHHHhc---cCCCCCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEEC-C-eeEEEEE
Q 040957 161 FGKVFGGQLVGQALAAASK---TVDCLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQK-G-NIIFTLL 235 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~---~~~~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~-g-~~~~~~~ 235 (430)
.+.+|||.+++++=.|+.. .......-.++++.|++|+..+..+..+.+.++.|++....+++++++ | +++++++
T Consensus 119 ~G~vHGG~iatLlD~a~g~aa~~~g~~~vT~~L~i~flrP~~~G~~l~a~a~v~~~ggr~~~v~~~i~~~dg~~lvA~a~ 198 (211)
T 4ae8_A 119 PGFIHGGAIATMIDATVGMCAMMAGGIVMTANLNINYKRPIPLCSVVMINSQLDKVEGRKFFVSCNVQSVDEKTLYSEAT 198 (211)
T ss_dssp TTBBCHHHHHHHHHHHHHHHHHHHHSCEEEEEEEEEECSCCBTTCEEEEEEEEEEEETTEEEEEEEEEETTSCCEEEEEE
T ss_pred CCcChHHHHHHHHHHHHHHHHHhcCCceEEEEEEEEEeccCCCCCEEEEEEEEEEeCCCEEEEEEEEEECCCCEEEEEEE
Confidence 3589999999887333221 112233456789999999998779999999999988888999999985 4 4889999
Q ss_pred Eecccc
Q 040957 236 ASFQKE 241 (430)
Q Consensus 236 ~sf~~~ 241 (430)
++|-..
T Consensus 199 ~tfv~~ 204 (211)
T 4ae8_A 199 SLFIKL 204 (211)
T ss_dssp EEEEEC
T ss_pred EEEEEE
Confidence 998654
No 109
>1sh8_A Hypothetical protein PA5026; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.50A {Pseudomonas aeruginosa} SCOP: d.38.1.5
Probab=97.26 E-value=0.00032 Score=58.24 Aligned_cols=79 Identities=16% Similarity=0.212 Sum_probs=61.2
Q ss_pred CceeehhHHHHHHHHHHhc----cCCC-CC--cceeeeeeeccCcCCCCCeEEEEEE------------eeeCCCeeEEE
Q 040957 161 FGKVFGGQLVGQALAAASK----TVDC-LK--IVHSLHCYFLLVGDLNIPIIYQVHR------------VRDGNSFATRR 221 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~----~~~~-~~--~~~s~~~~Fl~~~~~~~pi~~~V~~------------lr~Gr~~s~~~ 221 (430)
.+.+|||.+++++-.|+.. ..++ +. ...++++.|++|+. + .+..+.+. ++.||+....+
T Consensus 49 ~g~~hGG~i~~l~D~a~~~~~~~~~~~~~~~~vt~~~~i~fl~p~~-G-~l~a~a~v~~~~~~~~~~~~~~~gr~~~~~~ 126 (154)
T 1sh8_A 49 IGSMYAGALFTLAELPGGALFLTSFDSARFYPIVKEMTLRFRRPAK-G-DIRVEARLDAERIRQLETEAGERGKAEYSLE 126 (154)
T ss_dssp TSSBCHHHHHHHHHTHHHHHHHHHSCTTTEEEEEEEEEEEECSCCC-S-CEEEEEECCHHHHHHHHHHHHHHSEEEEEEE
T ss_pred ccchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEEEEEEEEeccCC-C-CEEEEEECCHHHHHHHHHHHHhCCceEEEEE
Confidence 3589999999887544432 2332 33 23568999999998 4 69999998 79999999999
Q ss_pred EEEE-ECCeeEEEEEEecccc
Q 040957 222 VDAI-QKGNIIFTLLASFQKE 241 (430)
Q Consensus 222 V~~~-Q~g~~~~~~~~sf~~~ 241 (430)
++++ ++|+++++++.+|...
T Consensus 127 ~~v~~~~g~~va~~~~t~~~~ 147 (154)
T 1sh8_A 127 LQLTDEQGEVVAESAALYQLR 147 (154)
T ss_dssp EEEECTTCCEEEEEEEEEEEE
T ss_pred EEEEeCCCCEEEEEEEEEEEE
Confidence 9999 5799999999887543
No 110
>3f5o_A Thioesterase superfamily member 2; hotdog fold, hydrolase; HET: UOC COA P6G; 1.70A {Homo sapiens} SCOP: d.38.1.5 PDB: 2f0x_A* 2cy9_A
Probab=97.24 E-value=0.0016 Score=53.48 Aligned_cols=89 Identities=17% Similarity=0.160 Sum_probs=68.2
Q ss_pred hHHHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEcc-CCCE
Q 040957 329 QALHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNT-KGEL 407 (430)
Q Consensus 329 ~~~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~-~G~l 407 (430)
..+|-..++-++|..+...++... ......|++.++.|.+|...++++..+.+....+......++++||+ +|++
T Consensus 53 G~vhGG~l~~l~D~a~~~a~~~~~----~~~~~vt~~l~i~fl~p~~~G~~l~~~a~v~~~g~~~~~~~~~i~~~~~g~l 128 (148)
T 3f5o_A 53 GTLHGGLTATLVDNISTMALLCTE----RGAPGVSVDMNITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKL 128 (148)
T ss_dssp SBBCHHHHHHHHHHHHHHHHHTSS----SCCCCEEEEEEEEECSCCBTTCEEEEEEEEEEECSSEEEEEEEEEETTTCCE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHcC----CCCcEEEEEEEEEEeCCCCCCCEEEEEEEEEEcCCeEEEEEEEEEECCCCeE
Confidence 345667788888975333332111 11235788999999999998999999999999999999999999998 9999
Q ss_pred EEEEeccceeccCC
Q 040957 408 LVSLTQEALLRSPK 421 (430)
Q Consensus 408 vA~~~Q~~l~r~~~ 421 (430)
||.++-.-++.+..
T Consensus 129 va~a~~t~~~~~~~ 142 (148)
T 3f5o_A 129 IAQGRHTKHLGNLE 142 (148)
T ss_dssp EEEEEEEEECC---
T ss_pred EEEEEEEEEccCcc
Confidence 99999988777654
No 111
>3hdu_A Putative thioesterase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 2.50A {Syntrophus aciditrophicus SB}
Probab=97.21 E-value=0.0024 Score=53.15 Aligned_cols=102 Identities=11% Similarity=0.085 Sum_probs=72.9
Q ss_pred eeEEEEecCCCCCC---ChHHHHHHHHHHhhhhhhhhhcccCc--cC-C-------CcceeeecceeeeccCCCCCCCeE
Q 040957 314 SLRYWFRAKGKLSD---DQALHRCVVAFASDLIFSSVSLNPHR--RK-G-------FRTASLSLDHSMWFHRSFRADDWL 380 (430)
Q Consensus 314 ~~~~W~R~~~~~~~---~~~~~~~~la~~sD~~~~~~~~~~~~--~~-~-------~~~~~~sld~si~f~~~~~~~~W~ 380 (430)
....-+.+.+..-. ...+|=.+++-++|..+-..++.... .. . .....+|++.+|.|.+|.. ++++
T Consensus 41 ~~~~~~~~~~~~~~Np~~G~~HGG~iatl~D~a~g~a~~~~~~~~~~~~~~~~~~~~~~~~vT~~l~i~ylrp~~-g~~l 119 (157)
T 3hdu_A 41 QVKLSFEMRDELIGNAIRRMLYGGVISSAIDMTAGLAAFMGFQEKMSGKPMEEKLAMIGRLSTMSLHVEYLRPGL-GREF 119 (157)
T ss_dssp EEEEEEEESSCCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSCHHHHHHHGGGEEEEEEEEEESSCCC-CSEE
T ss_pred EEEEEEECCHHHhCCCCCCeEcHHHHHHHHHHHHHHHHHhhCccccccccccccccccCceEEEEEEEEEECCCC-CCeE
Confidence 44455555554432 25678889999999754333222110 00 0 0013789999999999888 8999
Q ss_pred EeEEeecceeCCeeeEEEEEEccCCCEEEEEeccce
Q 040957 381 LFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEAL 416 (430)
Q Consensus 381 l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~Q~~l 416 (430)
..+.+..+.+.-....+++|||++|++||+++-.-+
T Consensus 120 ~a~a~v~~~gr~~~~~~~~i~~~~g~lvA~a~~t~~ 155 (157)
T 3hdu_A 120 VCTGYNVRTGNKVAVIRTELMNDQDELIAVGSVSYI 155 (157)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTCCEEEEEEEEEE
T ss_pred EEEEEEEEcCCeEEEEEEEEEeCCCcEEEEEEEEEE
Confidence 999999999999999999999999999999876543
No 112
>4ae7_A Thioesterase superfamily member 5; hydrolase, hotdog-fold; 1.45A {Homo sapiens}
Probab=97.10 E-value=0.0014 Score=57.39 Aligned_cols=81 Identities=16% Similarity=0.032 Sum_probs=61.1
Q ss_pred CceeehhHHHHHHHHHHhccC---CCCCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEEC-C-eeEEEEE
Q 040957 161 FGKVFGGQLVGQALAAASKTV---DCLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQK-G-NIIFTLL 235 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~~---~~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~-g-~~~~~~~ 235 (430)
.+.+|||.+++++=.|+...+ .....-.++++.|++|+..+.+++++.+.++.|++....+++++.+ | ++++.++
T Consensus 127 ~G~vHGGviatLlD~a~g~aa~~~g~~~VT~~L~I~ylrPv~~G~~l~~~a~Vv~~~gR~~~v~~eI~d~dG~~lvA~At 206 (220)
T 4ae7_A 127 PGFAHGGSLAAMMDETFSKTAFLAGEGLFTLSLNIRFKNLIPVDSLVVMDVEVDKIEDQKLYMSCIAHSRDQQTVYAKSS 206 (220)
T ss_dssp TTBBCHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEECSCCBTTCCEEEEEEEEEEETTEEEEEEEEECTTSSCEEEEEE
T ss_pred CCcchHHHHHHHHHHHHHHHHHhcCCceEEEEEEEEEccccCCCCEEEEEEEEEEeCCCEEEEEEEEEECCCCEEEEEEE
Confidence 358999999987633322211 1122355689999999998889999999999666667789999875 4 7999999
Q ss_pred Eecccc
Q 040957 236 ASFQKE 241 (430)
Q Consensus 236 ~sf~~~ 241 (430)
+.|...
T Consensus 207 a~fv~~ 212 (220)
T 4ae7_A 207 GVFLQL 212 (220)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 999764
No 113
>2q2b_A Cytosolic acyl coenzyme A thioester hydrolase; ACOT7, C-terminal domain; 2.50A {Mus musculus}
Probab=97.05 E-value=0.0046 Score=52.60 Aligned_cols=80 Identities=13% Similarity=-0.032 Sum_probs=62.9
Q ss_pred CceeehhHHHHHHHHHHh----ccCCCCCcceee-eeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEEC--------
Q 040957 161 FGKVFGGQLVGQALAAAS----KTVDCLKIVHSL-HCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQK-------- 227 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~----~~~~~~~~~~s~-~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~-------- 227 (430)
.+.+|||.+++.+=.|+. ...+......++ ++.|++|...+..+.+....++.||+.....++++++
T Consensus 41 ~G~v~gG~~~~~~D~a~~~~~~~~~~~~~vt~~~~~i~f~~pv~~Gd~l~v~a~v~~~G~ss~~~~~~v~~~~~~~~~g~ 120 (179)
T 2q2b_A 41 HGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDNSQK 120 (179)
T ss_dssp CCBCCHHHHHHHHHHHHHHHHHHHHCSCCEEEEEEEEEECSCCBTTEEEEEEEEEEEEETTEEEEEEEEEEEESCC---C
T ss_pred CCcEeHHHHHHHHHHHHHHHHHHHcCCCeEEEEEeeEEEccCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCCc
Confidence 468999999988755542 223445567788 5999999998778999999999999999999999874
Q ss_pred CeeEEEEEEeccc
Q 040957 228 GNIIFTLLASFQK 240 (430)
Q Consensus 228 g~~~~~~~~sf~~ 240 (430)
+++++++.++|-.
T Consensus 121 ~~l~a~a~~t~V~ 133 (179)
T 2q2b_A 121 RYRAASAFFTYVS 133 (179)
T ss_dssp CEEEEEEEEEEEC
T ss_pred eEEEEEEEEEEEE
Confidence 3577777777644
No 114
>2fs2_A Phenylacetic acid degradation protein PAAI; operon, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: d.38.1.5 PDB: 1psu_A
Probab=97.03 E-value=0.0026 Score=52.54 Aligned_cols=86 Identities=16% Similarity=0.084 Sum_probs=64.8
Q ss_pred HHHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEE
Q 040957 330 ALHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLV 409 (430)
Q Consensus 330 ~~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA 409 (430)
.+|-..++.+.|..+...+... + ....+++.+|.|.+|...++++..+++....+......++++||++|++||
T Consensus 51 ~vhGG~~~~l~D~a~~~a~~~~----g--~~~vt~~l~i~fl~Pv~~Gd~l~~~a~v~~~gr~~~~~~~~i~~~~g~lva 124 (151)
T 2fs2_A 51 SCHGGQLFSLADTAFAYACNSQ----G--LAAVASACTIDFLRPGFAGDTLTATAQVRHQGKQTGVYDIEIVNQQQKTVA 124 (151)
T ss_dssp BBCHHHHHHHHHHHHHHHHHTT----T--CCCEEEEEEEEECSCCBTTCEEEEEEEEEEECSSEEEEEEEEECTTSCEEE
T ss_pred CChHHHHHHHHHHHHHHHHhcC----C--CcEEEEEEEEEEecCCCCCCEEEEEEEEEEcCCcEEEEEEEEEeCCCCEEE
Confidence 3455667777886543222221 1 235678889999999998999999999999999999999999999999999
Q ss_pred EEeccceeccCC
Q 040957 410 SLTQEALLRSPK 421 (430)
Q Consensus 410 ~~~Q~~l~r~~~ 421 (430)
++...-++..++
T Consensus 125 ~a~~t~~~~~~~ 136 (151)
T 2fs2_A 125 LFRGKSHRIGGT 136 (151)
T ss_dssp EEEEEEEC----
T ss_pred EEEEEEEEeCCC
Confidence 999887776543
No 115
>3e29_A Uncharacterized protein Q7WE92_borbr; Q7WE92 NESG, structural genomics, PSI-2, Pro structure initiative; 2.40A {Bordetella bronchiseptica} SCOP: d.38.1.0
Probab=97.01 E-value=0.0025 Score=52.16 Aligned_cols=86 Identities=17% Similarity=0.099 Sum_probs=64.6
Q ss_pred HHHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEE
Q 040957 330 ALHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLV 409 (430)
Q Consensus 330 ~~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA 409 (430)
.+|-.+++-++|..+...+....+ ....+++.+|.|.+|...++ +..+.+....+......+++||+++|+++|
T Consensus 52 ~~hGG~l~~l~D~a~~~a~~~~~~-----~~~vt~~l~i~fl~p~~~g~-l~~~a~v~~~gr~~~~~~~~i~~~~g~~va 125 (144)
T 3e29_A 52 STHGGILATLVDAAGDYAVALKTG-----HPVPTMDMHVDYHRVATPGD-LRAEGQVIHFGKRFATAHARVLDMDGNLVA 125 (144)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHS-----SCCCEEEEEEEECSCCCSSC-EEEEEEEEEECSSEEEEEEEEEETTCCEEE
T ss_pred eEcHHHHHHHHHHHHHHHHHHcCC-----CceEEEEEEEEEecCCCCcE-EEEEEEEEEeCCcEEEEEEEEEeCCCCEEE
Confidence 456777888899754333322111 12458999999999887777 999999999999999999999999999999
Q ss_pred EEeccceeccCC
Q 040957 410 SLTQEALLRSPK 421 (430)
Q Consensus 410 ~~~Q~~l~r~~~ 421 (430)
+++-.-++....
T Consensus 126 ~a~~tf~~~~~~ 137 (144)
T 3e29_A 126 SGRALYLIRAPL 137 (144)
T ss_dssp EEEEEEECC---
T ss_pred EEEEEEEEcCcc
Confidence 998766665544
No 116
>3e1e_A Thioesterase family protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Silicibacter pomeroyi}
Probab=96.96 E-value=0.0031 Score=51.30 Aligned_cols=85 Identities=11% Similarity=0.133 Sum_probs=66.5
Q ss_pred HHHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEE---ccCCC
Q 040957 330 ALHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMF---NTKGE 406 (430)
Q Consensus 330 ~~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~---~~~G~ 406 (430)
.+|-..++-++|..+...+.... .......|++.++.|.+|.+ ++++..+.+....+......++++| |.+|+
T Consensus 52 ~~hGG~l~~l~D~a~~~a~~~~~---~~~~~~vt~~l~v~fl~p~~-g~~l~~~a~v~~~gr~~~~~~~~v~~~~~~~g~ 127 (141)
T 3e1e_A 52 FLHAGIVSTVLDSACGYAAFSLM---EEEAAVLTVEFKVNFLNPAE-GERFAFRAEVVKPGRTLTVATATAYAFRDGEER 127 (141)
T ss_dssp SBCHHHHHHHHHHHHHHHHHTTS---CTTEEEEEEEEEEEECSCCC-SSEEEEEEEEEECCSSEEEEEEEEEEESSSCEE
T ss_pred cCHHHHHHHHHHHHHHHHHHHhC---CCCCcEEEEEEEEEEEccCC-CCEEEEEEEEEEcCCCEEEEEEEEEEccCCCCc
Confidence 45677788889975433332221 11235789999999999988 8999999999999999999999999 89999
Q ss_pred EEEEEeccceec
Q 040957 407 LLVSLTQEALLR 418 (430)
Q Consensus 407 lvA~~~Q~~l~r 418 (430)
++|+++-.-++.
T Consensus 128 lva~a~~t~~~~ 139 (141)
T 3e1e_A 128 AIATMTATLMAL 139 (141)
T ss_dssp EEEEEEEEEEEE
T ss_pred EEEEEEEEEEEe
Confidence 999998776554
No 117
>2qq2_A Cytosolic acyl coenzyme A thioester hydrolase; ACOT7, C-terminal domain, thioesterase, structural genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens}
Probab=96.93 E-value=0.0042 Score=53.56 Aligned_cols=81 Identities=12% Similarity=-0.036 Sum_probs=62.4
Q ss_pred CCceeehhHHHHHHHHHHh----ccCCCCCcceeee-eeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEEC-------
Q 040957 160 KFGKVFGGQLVGQALAAAS----KTVDCLKIVHSLH-CYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQK------- 227 (430)
Q Consensus 160 ~~~~~~GG~~~a~al~Aa~----~~~~~~~~~~s~~-~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~------- 227 (430)
..+.+|||.+++.+=.|+. ...+......++. +.|++|...+..+.+....++.||+.....++++++
T Consensus 56 ~~G~vhgG~~~~~~D~a~~~~a~~~~~~~~vt~~~~~i~f~~Pv~~Gd~l~v~a~v~~~Grss~~~~~~v~~~~~~~~~g 135 (193)
T 2qq2_A 56 LHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQ 135 (193)
T ss_dssp SSSBBCHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEEEECSCCBTTEEEEEEEEEEEECSSEEEEEEEEEEEECC--CC
T ss_pred CCCcChHHHHHHHHHHHHHHHHHHHcCCCeEEEEEeEEEEccCCCCCCEEEEEEEEEecCCCEEEEEEEEEeccccCCCC
Confidence 3568999999998755542 2233344567787 999999998778999999999999999999999874
Q ss_pred -CeeEEEEEEeccc
Q 040957 228 -GNIIFTLLASFQK 240 (430)
Q Consensus 228 -g~~~~~~~~sf~~ 240 (430)
+++++++.++|-.
T Consensus 136 ~~~l~a~a~~t~V~ 149 (193)
T 2qq2_A 136 KRYRAASAFFTYVS 149 (193)
T ss_dssp CCEEEEEEEEEEEE
T ss_pred ceEEEEEEEEEEEE
Confidence 2567777776644
No 118
>1q4t_A Thioesterase; hot-DOG, hydrolase; HET: 4CO; 1.60A {Arthrobacter SP} SCOP: d.38.1.5 PDB: 1q4s_A* 1q4u_A* 3r37_A* 3r36_B* 3r3d_A* 3r34_A* 3r35_A* 3r3f_A* 3r32_A* 3r3a_A* 3r3b_A* 3r3c_A*
Probab=96.88 E-value=0.004 Score=51.35 Aligned_cols=88 Identities=10% Similarity=0.086 Sum_probs=65.7
Q ss_pred HHHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEE
Q 040957 330 ALHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLV 409 (430)
Q Consensus 330 ~~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA 409 (430)
.+|-..++-++|..+...+..... .......+++.++.|.+|...+ ++..+.+....+......++++||++|+++|
T Consensus 62 ~vhGG~l~~l~D~a~~~a~~~~~~--~~~~~~vt~~l~i~fl~p~~~G-~l~~~a~v~~~gr~~~~~~~~i~~~~g~lva 138 (151)
T 1q4t_A 62 LVHGGAYCALAEMLATEATVAVVH--EKGMMAVGQSNHTSFFRPVKEG-HVRAEAVRIHAGSTTWFWDVSLRDDAGRLCA 138 (151)
T ss_dssp SBCHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEEEEEEESSCCCSS-EEEEEEEEEEECSSEEEEEEEEECTTCCEEE
T ss_pred CChHHHHHHHHHHHHHHHHhhccc--cCCceEEEEEEEEEEECCCcCC-EEEEEEEEEECCCCEEEEEEEEEcCCCCEEE
Confidence 346667777888654222221100 0013467888999999988877 9999999999999999999999999999999
Q ss_pred EEeccceeccC
Q 040957 410 SLTQEALLRSP 420 (430)
Q Consensus 410 ~~~Q~~l~r~~ 420 (430)
++...-++..+
T Consensus 139 ~a~~t~~~~~~ 149 (151)
T 1q4t_A 139 VSSMSIAVRPR 149 (151)
T ss_dssp EEEEEEEEEEC
T ss_pred EEEEEEEEeCC
Confidence 99887776644
No 119
>4ae7_A Thioesterase superfamily member 5; hydrolase, hotdog-fold; 1.45A {Homo sapiens}
Probab=96.87 E-value=0.0083 Score=52.44 Aligned_cols=85 Identities=13% Similarity=0.119 Sum_probs=67.2
Q ss_pred hHHHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCC-CE
Q 040957 329 QALHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKG-EL 407 (430)
Q Consensus 329 ~~~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G-~l 407 (430)
..+|=.+++-+.|..+-.++... + ...+|++.+|.|++|++.++++..+.+.....+-...++++|+|+|| ++
T Consensus 128 G~vHGGviatLlD~a~g~aa~~~----g--~~~VT~~L~I~ylrPv~~G~~l~~~a~Vv~~~gR~~~v~~eI~d~dG~~l 201 (220)
T 4ae7_A 128 GFAHGGSLAAMMDETFSKTAFLA----G--EGLFTLSLNIRFKNLIPVDSLVVMDVEVDKIEDQKLYMSCIAHSRDQQTV 201 (220)
T ss_dssp TBBCHHHHHHHHHHHHHHHHHHH----H--CEEEEEEEEEEECSCCBTTCCEEEEEEEEEEETTEEEEEEEEECTTSSCE
T ss_pred CcchHHHHHHHHHHHHHHHHHhc----C--CceEEEEEEEEEccccCCCCEEEEEEEEEEeCCCEEEEEEEEEECCCCEE
Confidence 44577778888997644443321 1 24689999999999999999999999999988889999999999999 99
Q ss_pred EEEEeccceecc
Q 040957 408 LVSLTQEALLRS 419 (430)
Q Consensus 408 vA~~~Q~~l~r~ 419 (430)
+|++.-.-+...
T Consensus 202 vA~Ata~fv~~~ 213 (220)
T 4ae7_A 202 YAKSSGVFLQLQ 213 (220)
T ss_dssp EEEEEEEEEECC
T ss_pred EEEEEEEEEEec
Confidence 999976555443
No 120
>2qwz_A Phenylacetic acid degradation-related protein; putative thioesterase, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.87 E-value=0.0034 Score=52.36 Aligned_cols=85 Identities=11% Similarity=-0.039 Sum_probs=64.2
Q ss_pred HHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEcc-CCCEEE
Q 040957 331 LHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNT-KGELLV 409 (430)
Q Consensus 331 ~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~-~G~lvA 409 (430)
+|-..++-++|..+...+....+ ......+++.+|.|.+|...++++..+++....+......+++++++ +|++||
T Consensus 71 vhGG~l~al~D~a~~~a~~~~~~---~~~~~vt~~l~i~flrPv~~Gd~l~a~a~v~~~gr~~~~~~~~v~~~~~g~lvA 147 (159)
T 2qwz_A 71 VSGPSMFALADVSVYALVLAHLG---REALAVTTNASLDFMRKPESGRDLLGQARLLKLGRTLAVGDILLFSEGMEAPVA 147 (159)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHC---TTCCCEEEEEEEEECSCCCTTSCEEEEEEEEEECSSEEEEEEEEEETTCSSCSE
T ss_pred EeHHHHHHHHHHHHHHHHHHhCC---CCCceEEEEEEEEEEcCCCCCCEEEEEEEEEEcCCCEEEEEEEEEECCCCcEEE
Confidence 45556777888754332221111 11235688889999999988899999999999999999999999998 999999
Q ss_pred EEeccceec
Q 040957 410 SLTQEALLR 418 (430)
Q Consensus 410 ~~~Q~~l~r 418 (430)
++.-.-++.
T Consensus 148 ~a~~t~~i~ 156 (159)
T 2qwz_A 148 RSTMTYSIP 156 (159)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEEEe
Confidence 998775554
No 121
>1y7u_A Acyl-COA hydrolase; structural genomics, coenzyme A, protein structure initiative, PSI, midwest center for structural GE MCSG; HET: COA; 2.80A {Bacillus cereus} SCOP: d.38.1.1
Probab=96.85 E-value=0.0037 Score=52.95 Aligned_cols=81 Identities=19% Similarity=0.201 Sum_probs=62.2
Q ss_pred CceeehhHHHHHHHHHHhc----cCCCCCcceee-eeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEEC----C--e
Q 040957 161 FGKVFGGQLVGQALAAASK----TVDCLKIVHSL-HCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQK----G--N 229 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~----~~~~~~~~~s~-~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~----g--~ 229 (430)
.+.+|||.++..+-.|+.. .........++ ++.|++|...+..+.+....++.||+.....++++.. | +
T Consensus 34 ~G~v~gG~~~~~~D~a~~~~a~~~~~~~~vt~~~d~i~F~~Pv~~gd~l~v~a~V~~~G~ss~~v~~~v~~~~~~~g~~~ 113 (174)
T 1y7u_A 34 HNTLFGGKILSEMDMVASISASRHSRKECVTASMDWVDFLHPVRSSDCVSYESFVIWTGRTSMEVFVKVVSEYLISGEKR 113 (174)
T ss_dssp TSSBCHHHHHHHHHHHHHHHHHHHHCSEEEEEEECCCCCCSCCCTTCEEEEEEEEEEECSSEEEEEEEEEEECTTTCCEE
T ss_pred CCcEeHHHHHHHHHHHHHHHHHHHcCCCeEEEEEccEEEcCCCCCCCEEEEEEEEEEeCCCEEEEEEEEEEEcCCCCcEE
Confidence 4689999999877555422 22323445678 8999999998778999999999999999999999873 3 5
Q ss_pred eEEEEEEecccc
Q 040957 230 IIFTLLASFQKE 241 (430)
Q Consensus 230 ~~~~~~~sf~~~ 241 (430)
+++.+.++|-.-
T Consensus 114 l~a~a~~t~V~v 125 (174)
T 1y7u_A 114 IAATSFVTFVAL 125 (174)
T ss_dssp EEEEEEEEEEEE
T ss_pred EEEEEEEEEEEE
Confidence 777777777543
No 122
>2eis_A Hypothetical protein TTHB207; COA binding motif, NPPSFA, national project on protein struc functional analyses; HET: COA; 2.10A {Thermus thermophilus}
Probab=96.84 E-value=0.014 Score=46.59 Aligned_cols=81 Identities=14% Similarity=0.022 Sum_probs=62.8
Q ss_pred CceeehhHHHHHHHHHHhcc---CCCCC-cceee-eeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEEC------C-
Q 040957 161 FGKVFGGQLVGQALAAASKT---VDCLK-IVHSL-HCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQK------G- 228 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~---~~~~~-~~~s~-~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~------g- 228 (430)
.+.+|||..+..+-.|+... ...+. .+.+. ++.|++|...+..+.++.+.++.||+.....++++.+ |
T Consensus 18 ~G~v~gg~~~~~~d~a~~~~~~~~~~~~~~~~~~~~i~f~~pv~~gd~l~v~~~v~~~g~~s~~~~~~i~~~~~~~~~~~ 97 (133)
T 2eis_A 18 YGTLFGGTVLAWMDQAAFVAATRHARKKVVTVHADAVDFKRPVPLGAIVELVARLKEVGRTSMRVEVEMWVEPVKEGEEA 97 (133)
T ss_dssp TSBBCHHHHHHHHHHHHHHHHHHHHTSCEEEEEEEEEEECSCCBTTCEEEEEEEEEEECSSEEEEEEEEEECCCSTTCCC
T ss_pred CceEeHHHHHHHHHHHHHHHHHHhcCCcEEEEEEccEEEcccccCCCEEEEEEEEEEeCCcEEEEEEEEEEecCCCCcee
Confidence 46899999998876664321 11222 23344 6999999999888999999999999999999999986 5
Q ss_pred eeEEEEEEecccc
Q 040957 229 NIIFTLLASFQKE 241 (430)
Q Consensus 229 ~~~~~~~~sf~~~ 241 (430)
++++++.++|-.-
T Consensus 98 ~~~a~~~~~~v~v 110 (133)
T 2eis_A 98 YLAARGGFVLVAV 110 (133)
T ss_dssp EEEEEEEEEEEEB
T ss_pred EEEEEEEEEEEEE
Confidence 8898888877553
No 123
>3bjk_A Acyl-COA thioester hydrolase HI0827; hotdog fold, trimer of dimers, YCIA, structural GENO structure 2 function project, S2F; HET: CIT; 1.90A {Haemophilus influenzae rd KW20} PDB: 1yli_A*
Probab=96.78 E-value=0.0099 Score=48.84 Aligned_cols=81 Identities=16% Similarity=0.164 Sum_probs=60.9
Q ss_pred CceeehhHHHHHHHHHHhcc---CCCCC--cceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEEC-------C
Q 040957 161 FGKVFGGQLVGQALAAASKT---VDCLK--IVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQK-------G 228 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~---~~~~~--~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~-------g 228 (430)
.+.+|||.++..+-.|+... ...+. .+...++.|++|...+..++++++.++.||+.....++++.+ |
T Consensus 30 ~G~v~gg~~~~~~d~a~~~~~~~~~~~~~~~v~~~~i~f~~pv~~gd~l~v~~~v~~~g~~s~~~~~~i~~~~~~~~~~g 109 (153)
T 3bjk_A 30 NGDIFGGWIMSQMAMGGAILAKEIAHGRVVTVAVESMNFIKPISVGDVVCCYGQCLKVGRSSIKIKVEVWVKKVASEPIG 109 (153)
T ss_dssp TSSBCHHHHHHHHHHHHHHHHHHHHTSCEEEEEEEEEEECSCCCTTCEEEEEEEEEEECSSEEEEEEEEEEECSSSSSTT
T ss_pred CCcEeHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeeEEEeCCccCCCEEEEEEEEEEecCcEEEEEEEEEEcccCcccCC
Confidence 45899999988876554221 11222 233468999999998888999999999999999999999875 3
Q ss_pred --eeEEEEEEecccc
Q 040957 229 --NIIFTLLASFQKE 241 (430)
Q Consensus 229 --~~~~~~~~sf~~~ 241 (430)
++++.+.++|-.-
T Consensus 110 ~~~l~a~a~~~~v~v 124 (153)
T 3bjk_A 110 ERYCVTDAVFTFVAV 124 (153)
T ss_dssp CEEEEEEEEEEEEEB
T ss_pred ceEEEEEEEEEEEEE
Confidence 5788887776543
No 124
>4ae8_A Thioesterase superfamily member 4; hydrolase, hotdog-fold; 1.59A {Homo sapiens} PDB: 4gah_A*
Probab=96.77 E-value=0.0074 Score=52.68 Aligned_cols=84 Identities=12% Similarity=0.080 Sum_probs=66.4
Q ss_pred hHHHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCC-CE
Q 040957 329 QALHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKG-EL 407 (430)
Q Consensus 329 ~~~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G-~l 407 (430)
..+|=.+++.+.|..+-..+... + ...+|++.+|.|++|++.++++..+++....++-...++++|+|++| ++
T Consensus 120 G~vHGG~iatLlD~a~g~aa~~~----g--~~~vT~~L~i~flrP~~~G~~l~a~a~v~~~ggr~~~v~~~i~~~dg~~l 193 (211)
T 4ae8_A 120 GFIHGGAIATMIDATVGMCAMMA----G--GIVMTANLNINYKRPIPLCSVVMINSQLDKVEGRKFFVSCNVQSVDEKTL 193 (211)
T ss_dssp TBBCHHHHHHHHHHHHHHHHHHH----H--SCEEEEEEEEEECSCCBTTCEEEEEEEEEEEETTEEEEEEEEEETTSCCE
T ss_pred CcChHHHHHHHHHHHHHHHHHhc----C--CceEEEEEEEEEeccCCCCCEEEEEEEEEEeCCCEEEEEEEEEECCCCEE
Confidence 44577778889997544333322 1 24789999999999999999999999999998888999999999999 69
Q ss_pred EEEEeccceec
Q 040957 408 LVSLTQEALLR 418 (430)
Q Consensus 408 vA~~~Q~~l~r 418 (430)
+|++.-.-+..
T Consensus 194 vA~a~~tfv~~ 204 (211)
T 4ae8_A 194 YSEATSLFIKL 204 (211)
T ss_dssp EEEEEEEEEEC
T ss_pred EEEEEEEEEEE
Confidence 99988655544
No 125
>2h4u_A Thioesterase superfamily member 2; structural genomics, structural genomics consortium, SGC, hydrolase; 2.20A {Homo sapiens} SCOP: d.38.1.5
Probab=96.72 E-value=0.0085 Score=48.96 Aligned_cols=83 Identities=19% Similarity=0.232 Sum_probs=62.6
Q ss_pred HHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEcc-CCCEEE
Q 040957 331 LHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNT-KGELLV 409 (430)
Q Consensus 331 ~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~-~G~lvA 409 (430)
+|-..++-++|..+...+.... .+ ....+++.++.|.+|...++++..+++....+......++++|++ +|++||
T Consensus 60 vhGG~l~~l~D~a~~~a~~~~~--~~--~~~vt~~l~i~fl~pv~~Gd~l~~~a~v~~~gr~~~~~~~~i~~~~~g~lva 135 (145)
T 2h4u_A 60 LHGGLTATLVDNISTMALLCTE--RG--APGVSVDMNITYMSPAKLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLIA 135 (145)
T ss_dssp BCHHHHHHHHHHHHHHHHHTSS--SC--CCCEEEEEEEEECSCCBTTCEEEEEEEEEEECSSEEEEEEEEEETTTCCEEE
T ss_pred ChHHHHHHHHHHHHHHHHHHhC--CC--CceEEEEEEEEEecCCCCCCEEEEEEEEEEcCCcEEEEEEEEEECCCCeEEE
Confidence 4555666677864322222111 11 225688889999999999999999999999999999999999998 999999
Q ss_pred EEecccee
Q 040957 410 SLTQEALL 417 (430)
Q Consensus 410 ~~~Q~~l~ 417 (430)
++...-++
T Consensus 136 ~a~~t~~i 143 (145)
T 2h4u_A 136 QGRHTKHL 143 (145)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEe
Confidence 99876554
No 126
>2hbo_A Hypothetical protein (NP_422103.1); thioesterase/thiol ester dehydrase-isomerase fold, structura genomics; HET: MSE PE4; 1.85A {Caulobacter vibrioides} SCOP: d.38.1.5
Probab=96.70 E-value=0.0072 Score=50.16 Aligned_cols=86 Identities=12% Similarity=0.029 Sum_probs=65.6
Q ss_pred HHHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEE
Q 040957 330 ALHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLV 409 (430)
Q Consensus 330 ~~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA 409 (430)
.+|-..++-++|..+...++... + ....+++.+|.|.+|...++++..+.+....+......++++|+ +|+++|
T Consensus 60 ~vhGG~~~~l~D~a~~~a~~~~~---~--~~~vt~~l~i~fl~p~~~Gd~l~~~a~v~~~g~~~~~~~~~i~~-~g~lva 133 (158)
T 2hbo_A 60 NCHGGMLMSFADMAWGRIISLQK---S--YSWVTVRLMCDFLSGAKLGDWVEGEGELISEEDMLFTVRGRIWA-GERTLI 133 (158)
T ss_dssp BBCHHHHHHHHHHHHHHHHHHHH---C--EEEEEEEEEEEECSCCBTTCEEEEEEEEEEEETTEEEEEEEEEE-TTEEEE
T ss_pred chHHHHHHHHHHHHHHHHHHHcc---C--CcEEEEEEEEEEecCCCCCCEEEEEEEEEEeCCcEEEEEEEEEE-CCEEEE
Confidence 34555666677865322222111 1 34678899999999999999999999999999999999999999 799999
Q ss_pred EEeccceeccCC
Q 040957 410 SLTQEALLRSPK 421 (430)
Q Consensus 410 ~~~Q~~l~r~~~ 421 (430)
++.-.-++..++
T Consensus 134 ~a~~t~~~~~~~ 145 (158)
T 2hbo_A 134 TGTGVFKALSAR 145 (158)
T ss_dssp EEEEEEEEEEEC
T ss_pred EEEEEEEEeCCC
Confidence 998877766543
No 127
>3e8p_A Uncharacterized protein; X-RAY Q8E9M7 SOR246 NESG structure, structural genomics, PSI-2, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=96.65 E-value=0.0045 Score=51.88 Aligned_cols=86 Identities=17% Similarity=0.069 Sum_probs=63.5
Q ss_pred hHHHHHHHHHHhhhhhhhhhcccC--ccCCC--------cceeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEE
Q 040957 329 QALHRCVVAFASDLIFSSVSLNPH--RRKGF--------RTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSG 398 (430)
Q Consensus 329 ~~~~~~~la~~sD~~~~~~~~~~~--~~~~~--------~~~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~ 398 (430)
..+|=.+++-++|..+-..++... ..... ....+|++.+|.|.+|.. ++++..+.+....+......++
T Consensus 66 G~vHGG~iatL~D~a~g~a~~~~~~~~~~~~~~~~~~~~~~~~vT~~l~v~flrp~~-g~~l~a~a~v~~~Gr~~~~~~~ 144 (164)
T 3e8p_A 66 QILHGGVTATVLDVVGGLTAFAGLVASRDDWTIEELQQRLQTLGTIDMRVDYLRPGR-GQIFTGTGSVIRAGNRVSVCRM 144 (164)
T ss_dssp TEECHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHCEEEEEEEEECSCCC-CSEEEEEEEEEECCSSEEEEEE
T ss_pred CeEeHHHHHHHHHHHHHHHHHHhcccccccccccccccccccceEEEEEEEEecCCC-CCeEEEEEEEEEcCCcEEEEEE
Confidence 345667788888975432222111 00000 024679999999999887 8999999999999999999999
Q ss_pred EEEccCCCEEEEEeccc
Q 040957 399 EMFNTKGELLVSLTQEA 415 (430)
Q Consensus 399 ~i~~~~G~lvA~~~Q~~ 415 (430)
+|||++|+++|+++-.-
T Consensus 145 ~i~~~~g~lvA~a~~tf 161 (164)
T 3e8p_A 145 ELHNEQGTHIAFGTGTY 161 (164)
T ss_dssp EEEETTCCEEEEEEEEE
T ss_pred EEEeCCCCEEEEEEEEE
Confidence 99999999999987543
No 128
>1vpm_A Acyl-COA hydrolase; NP_241664.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative hydrolase; HET: COA; 1.66A {Bacillus halodurans} SCOP: d.38.1.1 PDB: 3sps_A
Probab=96.65 E-value=0.0044 Score=52.17 Aligned_cols=80 Identities=13% Similarity=0.178 Sum_probs=62.7
Q ss_pred CceeehhHHHHHHHHHHh----ccCCCCCcceee-eeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEECC------e
Q 040957 161 FGKVFGGQLVGQALAAAS----KTVDCLKIVHSL-HCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKG------N 229 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~----~~~~~~~~~~s~-~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~g------~ 229 (430)
.+.+|||.++..+-.||. ...+......++ ++.|++|...+..+.++...++.|++.....++++.++ +
T Consensus 38 ~G~v~gg~~~~~~d~aa~~~~~~~~g~~~vt~~~~~i~f~~pv~~gd~l~v~~~v~~~g~ss~~~~~~i~~~~~~~g~~~ 117 (169)
T 1vpm_A 38 LGTIFGGKVLAYIDEIAALTAMKHANSAVVTASIDSVDFKSSATVGDALELEGFVTHTGRTSMEVYVRVHSNNLLTGERT 117 (169)
T ss_dssp TSBBCHHHHHHHHHHHHHHHHHHHHTSEEEEEEECCCCCCSCCBTTEEEEEEEEEEEECSSEEEEEEEEEEEETTTCCEE
T ss_pred CCcEeHHHHHHHHHHHHHHHHHHhCCCCEEEEEeeeEEEeCCCCCCCEEEEEEEEEEECCcEEEEEEEEEEecCCCCceE
Confidence 568999999988765432 222333456778 89999999987789999999999999999999998753 6
Q ss_pred eEEEEEEeccc
Q 040957 230 IIFTLLASFQK 240 (430)
Q Consensus 230 ~~~~~~~sf~~ 240 (430)
+++++.++|-.
T Consensus 118 l~a~a~~t~V~ 128 (169)
T 1vpm_A 118 LTTESFLTMVA 128 (169)
T ss_dssp EEEEEEEEEEE
T ss_pred EEEEEEEEEEE
Confidence 77877777644
No 129
>2ov9_A Hypothetical protein; rhodococcus SP. RHA1, RHA08564, structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Rhodococcus SP} SCOP: d.38.1.5
Probab=96.63 E-value=0.01 Score=52.07 Aligned_cols=83 Identities=17% Similarity=0.132 Sum_probs=64.6
Q ss_pred HHHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEE
Q 040957 330 ALHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLV 409 (430)
Q Consensus 330 ~~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA 409 (430)
.+|=..++.+.|..+-..+.. . +. ...|++++|.|.+|...++++..+.+....++.....+++|+|++|+++|
T Consensus 128 ~vHGG~latLlD~a~g~a~~~-~---g~--~~vT~~l~v~flrPv~~G~~l~~~a~V~~~g~r~~~v~~~i~~~~G~lvA 201 (216)
T 2ov9_A 128 HVHGGVSALLLDHVLGVANAW-G---GK--AGMTAQLSTRYHRPTPLFEPLTLTGKLMSVDGRKITTAGDIRTADGQVCV 201 (216)
T ss_dssp BBCHHHHHHHHHHHHHHHHHH-T---TC--CCEEEEEEEEECSCCBSSSEEEEEEEEEEEETTEEEEEEEEECTTCCEEE
T ss_pred eEhHHHHHHHHHHHHHHHHHh-c---CC--ceEEEEEEEEEecCCCCCCEEEEEEEEEEeCCCEEEEEEEEEECCCcEEE
Confidence 456667777888654322222 1 11 35688899999999999999999999999999999999999999999999
Q ss_pred EEeccceec
Q 040957 410 SLTQEALLR 418 (430)
Q Consensus 410 ~~~Q~~l~r 418 (430)
++.-.-++.
T Consensus 202 ~a~~t~v~~ 210 (216)
T 2ov9_A 202 SVEGLFVDK 210 (216)
T ss_dssp EEEEEEEC-
T ss_pred EEEEEEEEe
Confidence 988765443
No 130
>1iq6_A (R)-hydratase, (R)-specific enoyl-COA hydratase; polyhydroxyalkanoate, aeromonas caviae, the hydratase 2 motif, lyase; 1.50A {Aeromonas punctata} SCOP: d.38.1.4
Probab=96.57 E-value=0.018 Score=45.98 Aligned_cols=79 Identities=16% Similarity=0.017 Sum_probs=60.5
Q ss_pred CceeehhHHHHHHHHHHhccCCC-CCcceeeeeeeccCcCCCCCeEEEEEEee--eCCCeeEEEEEEE-ECCeeEEEEEE
Q 040957 161 FGKVFGGQLVGQALAAASKTVDC-LKIVHSLHCYFLLVGDLNIPIIYQVHRVR--DGNSFATRRVDAI-QKGNIIFTLLA 236 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~~~~-~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr--~Gr~~s~~~V~~~-Q~g~~~~~~~~ 236 (430)
+..++|+.+++++..++....+. .....+..+.|++|..++..+.++++.++ .++...+.++++. |+|++++.+.+
T Consensus 50 ~~i~hG~~~~~l~~~~~~~~~~~~~~~~~~~~~rf~~Pv~~Gd~l~~~~~v~~~~~~~~~v~~~~~~~n~~g~~v~~~~~ 129 (134)
T 1iq6_A 50 RPIVHGMLLASLFSGLLGQQLPGKGSIYLGQSLSFKLPVFVGDEVTAEVEVTALREDKPIATLTTRIFTQGGALAVTGEA 129 (134)
T ss_dssp SCBCCHHHHHHHHHHHHHHTSSCTTCEEEEEEEEECSCCBTTCEEEEEEEEEEECSSSSEEEEEEEEECTTSCEEEEEEE
T ss_pred CceECHHHHHHHHHHHHhhhcCCCceEEEEEEEEEcCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEEeCCCCEEEEeEE
Confidence 45799999999887776555542 23356788999999999888888776654 4567888888888 89999998887
Q ss_pred ecc
Q 040957 237 SFQ 239 (430)
Q Consensus 237 sf~ 239 (430)
.+.
T Consensus 130 ~~~ 132 (134)
T 1iq6_A 130 VVK 132 (134)
T ss_dssp EEE
T ss_pred EEE
Confidence 763
No 131
>1sh8_A Hypothetical protein PA5026; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.50A {Pseudomonas aeruginosa} SCOP: d.38.1.5
Probab=96.56 E-value=0.011 Score=48.80 Aligned_cols=88 Identities=15% Similarity=0.112 Sum_probs=61.6
Q ss_pred HHHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEee------------cceeCCeeeEE
Q 040957 330 ALHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVS------------PVASKARGFVS 397 (430)
Q Consensus 330 ~~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~------------~~~~~gr~~~~ 397 (430)
.+|-.+++-++|..+...+..... .......+.+.+|.|.+|.. ++ +..+++. ...+.+....+
T Consensus 51 ~~hGG~i~~l~D~a~~~~~~~~~~--~~~~~~vt~~~~i~fl~p~~-G~-l~a~a~v~~~~~~~~~~~~~~~gr~~~~~~ 126 (154)
T 1sh8_A 51 SMYAGALFTLAELPGGALFLTSFD--SARFYPIVKEMTLRFRRPAK-GD-IRVEARLDAERIRQLETEAGERGKAEYSLE 126 (154)
T ss_dssp SBCHHHHHHHHHTHHHHHHHHHSC--TTTEEEEEEEEEEEECSCCC-SC-EEEEEECCHHHHHHHHHHHHHHSEEEEEEE
T ss_pred chHHHHHHHHHHHHHHHHHHHhcC--cCcEEEEEEEEEEEEeccCC-CC-EEEEEECCHHHHHHHHHHHHhCCceEEEEE
Confidence 356667888889754332221111 11234578889999999887 56 8888887 34444556788
Q ss_pred EEEEccCCCEEEEEeccceeccCC
Q 040957 398 GEMFNTKGELLVSLTQEALLRSPK 421 (430)
Q Consensus 398 ~~i~~~~G~lvA~~~Q~~l~r~~~ 421 (430)
++++|++|++||++...-+++.++
T Consensus 127 ~~v~~~~g~~va~~~~t~~~~~~~ 150 (154)
T 1sh8_A 127 LQLTDEQGEVVAESAALYQLRSHA 150 (154)
T ss_dssp EEEECTTCCEEEEEEEEEEEEECC
T ss_pred EEEEeCCCCEEEEEEEEEEEEecC
Confidence 999999999999999988777654
No 132
>2b3n_A Hypothetical protein AF1124; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.25A {Archaeoglobus fulgidus} PDB: 2b3m_A 3k67_A
Probab=96.50 E-value=0.023 Score=47.20 Aligned_cols=77 Identities=8% Similarity=-0.099 Sum_probs=61.9
Q ss_pred CceeehhHHHHHHHHHHhccCCCCCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEECCeeEEEEEEec
Q 040957 161 FGKVFGGQLVGQALAAASKTVDCLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKGNIIFTLLASF 238 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~~~~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~g~~~~~~~~sf 238 (430)
+..++|.++++++..++. ..+..-...+..+.|.+|..++..+.++++....++...+..+++.|+|++++.+.+.+
T Consensus 80 ~~IahG~lt~al~~~~~~-~~~g~~~~~~~~~rF~~PV~~GD~L~~~~~v~~~~~~~v~~~~~~~~~G~~V~~g~~~v 156 (159)
T 2b3n_A 80 GRVVHGMLTTSLVSAAVA-RLPGTVVLLEQSFRYTSPVRIGDVVRVEGVVSGVEKNRYTIDVKCYTGDKVVAEGVVKV 156 (159)
T ss_dssp SCCCCHHHHHHHHHHHHH-TSSSCEEEEEEEEEECSCCCTTCEEEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEE
T ss_pred CcccCHHHHHHHHHHHHH-hCCCceeeeeeeeEECCCcCCCCEEEEEEEEEEEcCCEEEEEEEEEeCCeEEEEEEEEE
Confidence 457999999998877766 44422234567899999999999999999988767778888888899999999988765
No 133
>1t82_A Hypothetical acetyltransferase; structural genomics, alpha-beta dimeric protein with A fold resembling A hotdog, PSI; 1.70A {Shewanella oneidensis} SCOP: d.38.1.5
Probab=96.41 E-value=0.0063 Score=50.42 Aligned_cols=97 Identities=8% Similarity=-0.035 Sum_probs=63.1
Q ss_pred cCccccceeecccCCC--CCCCceeehhHHHHHHHHHH----hccCCC---C--CcceeeeeeeccCcCCCCCeEEEEEE
Q 040957 142 LEPVEVNIFQGITLPD--APKFGKVFGGQLVGQALAAA----SKTVDC---L--KIVHSLHCYFLLVGDLNIPIIYQVHR 210 (430)
Q Consensus 142 l~~~~~~~f~~~~~~~--~~~~~~~~GG~~~a~al~Aa----~~~~~~---~--~~~~s~~~~Fl~~~~~~~pi~~~V~~ 210 (430)
+..++++.-+...+.. ....+.+|||.+.++|=.|+ ...+++ + .....+++.|++|+..+ +..+.+.
T Consensus 36 i~~~~~g~~~~~~~~~~~~N~~GtvHGG~l~tLaD~a~g~a~~~~~~~~g~~~~~vt~~~~i~flrpa~~~--l~a~a~~ 113 (155)
T 1t82_A 36 PLSFTDGELSVSAPLAPNINLHHTMFAGSIYTIMTLTGWGMVWLQQQLLNVDGDIVLADAHIRYLAPVTSA--PEVKVRW 113 (155)
T ss_dssp EEEEETTEEEEECCSGGGBCTTSSBCHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEEEEECSCCCSC--CEEEEEC
T ss_pred EEEEeCCEEEEEEECccccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEEecccCCC--EEEEEEe
Confidence 3445555444443332 12356899999999983321 122221 1 23557899999999753 5666554
Q ss_pred e--------eeCCCeeEEEEEEEECCeeEEEEEEeccc
Q 040957 211 V--------RDGNSFATRRVDAIQKGNIIFTLLASFQK 240 (430)
Q Consensus 211 l--------r~Gr~~s~~~V~~~Q~g~~~~~~~~sf~~ 240 (430)
. +.||+....+|+++.++.++..++.+|..
T Consensus 114 ~~~~~~~~~~~gr~~~~~~v~i~d~~glvA~~~~t~~i 151 (155)
T 1t82_A 114 PDTNLSPLQRGRKAKVKLEVQLFCDGKLCAQFDGLYVS 151 (155)
T ss_dssp CSCCCGGGGGTCCEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CHHHHHHHHhCCceEEEEEEEEEECCcCEEEEEEEEEE
Confidence 4 55999999999999877788888877754
No 134
>2cye_A TTHA1846, putative thioesterase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: COA; 1.90A {Thermus thermophilus} SCOP: d.38.1.1
Probab=96.41 E-value=0.019 Score=45.70 Aligned_cols=81 Identities=15% Similarity=0.026 Sum_probs=66.1
Q ss_pred CCceeehhHHHHHHHHHHhccC---------CCCCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEECCee
Q 040957 160 KFGKVFGGQLVGQALAAASKTV---------DCLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKGNI 230 (430)
Q Consensus 160 ~~~~~~GG~~~a~al~Aa~~~~---------~~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~g~~ 230 (430)
..+.+|||..+..+-.|+.... .....+.++++.|++|...+..++++....+.|++......+++.+|++
T Consensus 19 ~~G~v~~~~y~~~~~~a~~~~~~~~g~~~~~~~~~v~~~~~i~y~~~~~~gd~l~v~~~v~~~~~~s~~~~~~i~~~g~~ 98 (133)
T 2cye_A 19 PLGHVNNAVFLSYMELARIRYFQRISPDWLEEGHFVVARMEVDYLRPILLGDEVFVGVRTVGLGRSSLRMEHLVTANGES 98 (133)
T ss_dssp TTSBBCHHHHHHHHHHHHHHHHTTC--CGGGGGGEEEEEEEEEECSCCBTTCEEEEEEEEEEECSSEEEEEEEEEETTEE
T ss_pred ccccccHHHHHHHHHHHHHHHHHHcCCccccCceEEEEEEEEEEeccccCCCEEEEEEEEEEeCCcEEEEEEEEEECCEE
Confidence 3568999999998877743321 1134577899999999999889999999999999999999999999999
Q ss_pred EEEEEEeccc
Q 040957 231 IFTLLASFQK 240 (430)
Q Consensus 231 ~~~~~~sf~~ 240 (430)
++.+...+-.
T Consensus 99 ~a~~~~~~v~ 108 (133)
T 2cye_A 99 AAKGLGVLVW 108 (133)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEEEEE
Confidence 9988876644
No 135
>2v1o_A Cytosolic acyl coenzyme A thioester hydrolase; acyl-COA thioesterase 7, serine esterase, protein structure, domain duplication, ACOT7, macrophage; HET: COA; 1.78A {Mus musculus}
Probab=96.28 E-value=0.017 Score=47.40 Aligned_cols=80 Identities=10% Similarity=0.066 Sum_probs=59.4
Q ss_pred CceeehhHHHHHHHHHHhc----cCCC---CC---cceee-eeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEEC--
Q 040957 161 FGKVFGGQLVGQALAAASK----TVDC---LK---IVHSL-HCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQK-- 227 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~----~~~~---~~---~~~s~-~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~-- 227 (430)
.+.+|||.++..+=.|+.. .... .. ...++ ++.|++|...+..+.++....+.|++.....++++.+
T Consensus 14 ~G~v~gg~~~~~~d~a~~~~~~~~~~~~~~~~~~~vt~~~~~i~f~~Pv~~gd~l~i~~~v~~~g~ss~~~~~~v~~~~~ 93 (151)
T 2v1o_A 14 AGNVHGGTILKMIEEAGAIISTRHCNSQNGERCVAALARVERTDFLSPMCIGEVAHVSAEITYTSKHSVEVQVHVMSENI 93 (151)
T ss_dssp TSBBCHHHHHHHHHHHHHHHHHHHHTTTCCSCEEEEEEEECCEECCSCCBTTCEEEEEEEEEEECSSCEEEEEEEEEECT
T ss_pred CCcEeHHHHHHHHHHHHHHHHHHHhCcCCCCcceEEEEEEeeEEEeCCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEecC
Confidence 4689999998877555422 1121 11 12466 8999999998888999999999999999999999874
Q ss_pred ----CeeEEEEEEeccc
Q 040957 228 ----GNIIFTLLASFQK 240 (430)
Q Consensus 228 ----g~~~~~~~~sf~~ 240 (430)
+++++++.++|-.
T Consensus 94 ~~g~~~l~a~a~~~~v~ 110 (151)
T 2v1o_A 94 LTGTKKLTNKATLWYVP 110 (151)
T ss_dssp TTCCEEEEEEEEEEEEE
T ss_pred CCCceEEEEEEEEEEEE
Confidence 2567777766643
No 136
>1zki_A Hypothetical protein PA5202; structural genomics, PSI, protein ST initiative, midwest center for structural genomics, MCSG, U function; 1.70A {Pseudomonas aeruginosa} SCOP: d.38.1.5
Probab=96.26 E-value=0.022 Score=45.43 Aligned_cols=82 Identities=16% Similarity=0.132 Sum_probs=61.0
Q ss_pred HHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEE
Q 040957 331 LHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVS 410 (430)
Q Consensus 331 ~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~ 410 (430)
+|-..++.+.|......+..... ......+++.++.|.+|.. ++++..+++....+......++++|+ +|+++|.
T Consensus 49 vhgG~~~~l~d~a~~~~~~~~~~---~~~~~vt~~l~i~fl~p~~-g~~l~~~a~v~~~g~~~~~~~~~i~~-~g~~va~ 123 (133)
T 1zki_A 49 MHGGALFSLMDVTMGLACSSSHG---FDRQSVTLECKINYIRAVA-DGEVRCVARVLHAGRRSLVVEAEVRQ-GDKLVAK 123 (133)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHC---TTSCEEEEEEEEEECSCCC-SSEEEEEEEEEEECSSEEEEEEEEEE-TTEEEEE
T ss_pred CcHHHHHHHHHHHHHHHHHhccC---CCCceEEEEEEEEEECcCC-CCEEEEEEEEEECCceEEEEEEEEEE-CCEEEEE
Confidence 45566677778643222221110 1123678888999999988 89999999999999999999999999 9999999
Q ss_pred Eecccee
Q 040957 411 LTQEALL 417 (430)
Q Consensus 411 ~~Q~~l~ 417 (430)
+...-.+
T Consensus 124 a~~~~~~ 130 (133)
T 1zki_A 124 GQGTFAQ 130 (133)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 8876544
No 137
>1ixl_A Hypothetical protein PH1136; alpha+beta, hot-DOG-fold, structural genomics, unknown funct; 1.94A {Pyrococcus horikoshii} SCOP: d.38.1.5
Probab=96.18 E-value=0.044 Score=43.60 Aligned_cols=81 Identities=10% Similarity=0.027 Sum_probs=62.3
Q ss_pred HHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEE
Q 040957 331 LHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVS 410 (430)
Q Consensus 331 ~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~ 410 (430)
.|-..++-++|...... .. . . ...+.+.++.|.+|+..++.+..+.+....+......+++++ ++|++||+
T Consensus 46 ~hGg~~~~l~d~~~~~~-~~-~----~--~~vt~~~~i~f~~pv~~Gd~l~~~~~v~~~~~~~~~~~~~v~-~~g~~va~ 116 (131)
T 1ixl_A 46 VHGGFTFGLADYAAMLA-VN-E----P--TVVLGKAEVRFTKPVKVGDKLVAKAKIIEDLGKKKIVEVKVY-REEEVVLE 116 (131)
T ss_dssp BCHHHHHHHHHHHHHHH-HC-C----T--TEEEEEEEEEECSCCBTTCEEEEEEEEEEEETTEEEEEEEEE-ETTEEEEE
T ss_pred EEhHHHHHHHHHHHHhh-cc-C----C--ceEEEEEEEEECCCCCCCCEEEEEEEEEEecCcEEEEEEEEE-ECCEEEEE
Confidence 34445666777643222 21 1 1 246778899999999999999999999999999999999999 78999999
Q ss_pred EeccceeccC
Q 040957 411 LTQEALLRSP 420 (430)
Q Consensus 411 ~~Q~~l~r~~ 420 (430)
+.-..++..+
T Consensus 117 g~~~~~~~~~ 126 (131)
T 1ixl_A 117 GKFYCYVLEK 126 (131)
T ss_dssp EEEEEEECSS
T ss_pred EEEEEEEcCc
Confidence 9888776654
No 138
>2oiw_A Putative 4-hydroxybenzoyl-COA thioesterase; structural genomics, protein structure initiative, midwest center for structu genomics; 2.00A {Geobacillus stearothermophilus} SCOP: d.38.1.1
Probab=96.17 E-value=0.045 Score=43.63 Aligned_cols=80 Identities=10% Similarity=-0.014 Sum_probs=65.5
Q ss_pred CceeehhHHHHHHHHHHhccC----------CCCCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEECCee
Q 040957 161 FGKVFGGQLVGQALAAASKTV----------DCLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKGNI 230 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~~----------~~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~g~~ 230 (430)
.+.+|+|..+..+-.|+.... +....+..+++.|++|...+..+.+++...+.|++...+..+++.+|++
T Consensus 19 ~g~v~~~~y~~~~~~a~~~~~~~g~~~~~~~~~~~v~~~~~i~y~~~~~~gd~v~v~~~v~~~~~~s~~~~~~i~~~g~~ 98 (136)
T 2oiw_A 19 VGHINNTTVPVWFEAGRHEIFKLFTPDLSFKRWRMVIIRMEVDYVNQMYYGQDVTVYTGIERIGNTSLTIYEEIHQNGVV 98 (136)
T ss_dssp TSSBCGGGHHHHHHHHTHHHHHHHSTTCCGGGCCEEEEEEEEEECSCCCTTSCEEEEEEEEEECSSEEEEEEEEEETTEE
T ss_pred CceEChHHHHHHHHHHHHHHHHccCchhccCCceEEEEEEEEEEcccCCCCCEEEEEEEEEecCCcEEEEEEEEEECCEE
Confidence 568999998888777643211 1134578899999999999889999999999999999999999999999
Q ss_pred EEEEEEeccc
Q 040957 231 IFTLLASFQK 240 (430)
Q Consensus 231 ~~~~~~sf~~ 240 (430)
++.+...+-.
T Consensus 99 ~a~~~~~~v~ 108 (136)
T 2oiw_A 99 CAKGRSVYVN 108 (136)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEEEEE
Confidence 9888777643
No 139
>1yoc_A Hypothetical protein PA1835; structural genomics, PSI, protein structure initiati midwest center for structural genomics, MCSG, sulfur SAD; 1.70A {Pseudomonas aeruginosa} SCOP: d.38.1.5
Probab=96.15 E-value=0.023 Score=46.52 Aligned_cols=85 Identities=6% Similarity=-0.045 Sum_probs=62.3
Q ss_pred hHHHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEeeccee---CCeeeEEEEEEccCC
Q 040957 329 QALHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVAS---KARGFVSGEMFNTKG 405 (430)
Q Consensus 329 ~~~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~~~~---~gr~~~~~~i~~~~G 405 (430)
..+|-.+++-++|..+-..+.... .......|++.+|.|.+|.. +-+..+.+....+ ......+++++|+|
T Consensus 59 G~vHGG~i~tLaD~a~g~a~~~~~---~~~~~~vt~~l~i~ylrp~~--g~l~a~a~v~~~g~~~r~~~~~~~~v~~~~- 132 (147)
T 1yoc_A 59 GTVHAIALCNAAELAAGTMTDASI---PAGHRWIPRGMTVEYLAKAT--GDVRAVADGSQIDWQATGNLVVPVVAYVDD- 132 (147)
T ss_dssp SSBCHHHHHHHHHHHHHHHHHHHS---CTTEEEEEEEEEEEECSCCC--SCEEEEEECTTSCTTCCEEEEEEEEEEETT-
T ss_pred CCCHHHHHHHHHHHHHHHHHhccC---CCCCcEEEEEEEEEEeccCC--CcEEEEEEEcccccccceEEEEEEEEEECC-
Confidence 345777888899975433322111 11234679999999999877 4578888887777 77889999999999
Q ss_pred CEEEEEeccceecc
Q 040957 406 ELLVSLTQEALLRS 419 (430)
Q Consensus 406 ~lvA~~~Q~~l~r~ 419 (430)
++||+++...++.+
T Consensus 133 ~lvA~a~~t~~v~~ 146 (147)
T 1yoc_A 133 KPVFRAEITMYVSQ 146 (147)
T ss_dssp EEEEEEEEEEEEEE
T ss_pred EEEEEEEEEEEEeC
Confidence 99999988776653
No 140
>2pim_A Phenylacetic acid degradation-related protein; thioesterase superfamily, phenylacetic acid degradation-RELA protein; 2.20A {Ralstonia eutropha JMP134}
Probab=96.11 E-value=0.021 Score=46.17 Aligned_cols=84 Identities=14% Similarity=0.100 Sum_probs=62.0
Q ss_pred HHHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEE
Q 040957 330 ALHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLV 409 (430)
Q Consensus 330 ~~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA 409 (430)
.+|-..++-+.|..+...+..-. .......+++.++.|.+|...++ +..+.+....+......++++ +++|+++|
T Consensus 55 ~vhGG~~~~l~D~a~~~~~~~~~---~~~~~~vt~~l~i~fl~p~~~g~-l~~~a~v~~~g~~~~~~~~~i-~~~g~~va 129 (141)
T 2pim_A 55 QVQGGMLGAMLDDVTAMLVTATL---EDGASCSTLNLNLSFLRPAQAGL-LRGRARLERRGRNVCNVVGEL-SQDGKLVA 129 (141)
T ss_dssp SBCHHHHHHHHHHHHHHHHHHTC---CTTCCCEEEEEEEEECSCCCSEE-EEEEEEEEEECSSEEEEEEEE-EETTEEEE
T ss_pred CChHHHHHHHHHHHHHHHHHHhc---CCCCceEEEEEEEEEecCCCCCe-EEEEEEEEEeCCcEEEEEEEE-CCCCcEEE
Confidence 34666677788865433322111 01123578888999999988888 999999999999999999999 99999999
Q ss_pred EEeccceec
Q 040957 410 SLTQEALLR 418 (430)
Q Consensus 410 ~~~Q~~l~r 418 (430)
++.-.-++.
T Consensus 130 ~a~~t~~~~ 138 (141)
T 2pim_A 130 TATATCMVA 138 (141)
T ss_dssp EEEEEEEC-
T ss_pred EEEEEEEEe
Confidence 988765554
No 141
>2egj_A Hypothetical protein AQ_1494; structural genomics; 1.80A {Aquifex aeolicus} PDB: 2egi_A 2egr_A
Probab=95.86 E-value=0.055 Score=42.42 Aligned_cols=79 Identities=6% Similarity=-0.149 Sum_probs=63.8
Q ss_pred CceeehhHHHHHHHHHHhcc---CC--------C--CCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEEC
Q 040957 161 FGKVFGGQLVGQALAAASKT---VD--------C--LKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQK 227 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~---~~--------~--~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~ 227 (430)
.+.+|+|..+..+-.|+... .+ . ...+.++++.|.+|...+..+++++...+.|++...+..+++.+
T Consensus 17 ~g~v~~~~y~~~~~~a~~~~~~~~g~~~~~~~~~g~~~v~~~~~i~y~~~~~~gd~v~v~~~v~~~~~~~~~~~~~i~~~ 96 (128)
T 2egj_A 17 QGIVHHSNYFRYFEEARGEFLRSKGFPYSKMRDMGLEVVLLNAYCEYKKPLFYDDVFEVHLNLEELSRFTFTFSYIVFKE 96 (128)
T ss_dssp TSSBCTHHHHHHHHHHHHHHHHHTTCCHHHHHHTTEEEEEEEEEEEECSCCCTTCEEEEEEEEEEECSSEEEEEEEEEET
T ss_pred CCeEchHHHHHHHHHHHHHHHHHcCCCHHHHHhCCCeeEEEEEEEEEcCCCcCCCEEEEEEEEEEeCCcEEEEEEEEEEC
Confidence 56899999888877664321 11 1 23577899999999999889999999999999999999999999
Q ss_pred CeeEEEEEEecc
Q 040957 228 GNIIFTLLASFQ 239 (430)
Q Consensus 228 g~~~~~~~~sf~ 239 (430)
|++++++...+-
T Consensus 97 g~~~a~~~~~~v 108 (128)
T 2egj_A 97 DIAVAKANTKHC 108 (128)
T ss_dssp TEEEEEEEEEEE
T ss_pred CEEEEEEEEEEE
Confidence 999988876653
No 142
>2gvh_A AGR_L_2016P; 15159470, acyl-COA hydrolase, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.50A {Agrobacterium tumefaciens} SCOP: d.38.1.1 d.38.1.1
Probab=95.85 E-value=0.019 Score=52.74 Aligned_cols=81 Identities=21% Similarity=0.173 Sum_probs=62.8
Q ss_pred CCceeehhHHHHHHHHHHhc----cCCCCCcceee-eeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEEC----C--
Q 040957 160 KFGKVFGGQLVGQALAAASK----TVDCLKIVHSL-HCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQK----G-- 228 (430)
Q Consensus 160 ~~~~~~GG~~~a~al~Aa~~----~~~~~~~~~s~-~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~----g-- 228 (430)
..+.+|||.+++.+=.|+.. .........++ ++.|++|...+..+.++.+.++.||+..+..++++.+ |
T Consensus 173 ~~G~v~gG~~~~~~d~a~~~~a~~~~~~~~vt~~~d~i~f~~p~~~gd~l~v~~~v~~~g~~s~~~~~~v~~~~~~~g~~ 252 (288)
T 2gvh_A 173 SAGRMFGGEAIAYMTKAAFVAASRYCGKLVVLASSERIDFARAIEIGEIVEAQAHVERVGRSSMSIQTKLWSENLLTGER 252 (288)
T ss_dssp TTSBBCHHHHHHHHHHHHHHHHHHHHSSEEEEEEECCEEBSSCCBTTEEEEEEEEEEEECSSEEEEEEEEEEEETTTCCE
T ss_pred CCCcCcHHHHHHHHHHHHHHHHHHhcCCceEEEEeeeEEEeCcccCCCEEEEEEEEEEeCCCEEEEEEEEEEccCCCCce
Confidence 34689999999887555322 22233457789 9999999998778999999999999999999999864 3
Q ss_pred eeEEEEEEeccc
Q 040957 229 NIIFTLLASFQK 240 (430)
Q Consensus 229 ~~~~~~~~sf~~ 240 (430)
++++++.++|-.
T Consensus 253 ~l~a~a~~t~v~ 264 (288)
T 2gvh_A 253 HITATGHFTMVA 264 (288)
T ss_dssp EEEEEEEEEEEE
T ss_pred EEEEEEEEEEEE
Confidence 577777777644
No 143
>2gf6_A Conserved hypothetical protein; putative thioesterase, structural genomics, joint center for structural genomics, JCSG; HET: COA; 1.91A {Sulfolobus solfataricus} SCOP: d.38.1.1
Probab=95.84 E-value=0.03 Score=44.58 Aligned_cols=80 Identities=9% Similarity=-0.045 Sum_probs=64.1
Q ss_pred CceeehhHHHHHHHHHHhcc----C--CC-------CCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEEC
Q 040957 161 FGKVFGGQLVGQALAAASKT----V--DC-------LKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQK 227 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~----~--~~-------~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~ 227 (430)
.+.+|+|..+..+-.|+... . +. ...+.++++.|.+|...+..+++++...+-|++...+..++.++
T Consensus 21 ~ghv~~~~y~~~~~~a~~~~~~~~~g~~~~~~~~~~~~vv~~~~i~y~~~~~~gd~v~v~~~v~~~~~~s~~~~~~i~~~ 100 (135)
T 2gf6_A 21 QGIAHYAAYYRFFTNTIEKFIKEKVGIPYPIVNENLWFVIAESHAIYHRPVKLGDKLTVLLNPKILSNKTIKFEFKVLKD 100 (135)
T ss_dssp TSSBCHHHHHHHHHHHHHHHHHHHHCSCSSEEETTEEEEEEEEEEEECSCCCTTCEEEEEEEEEECSSSEEEEEEEEEET
T ss_pred CceEecchHHHHHHHHHHHHHHHhcCCCHHHHhccccEEEEEEEEEECCCCcCCCEEEEEEEEEEeCCcEEEEEEEEEEC
Confidence 56899999888776664321 1 11 14467789999999999889999999999999999999999999
Q ss_pred CeeEEEEEEeccc
Q 040957 228 GNIIFTLLASFQK 240 (430)
Q Consensus 228 g~~~~~~~~sf~~ 240 (430)
|++++++...+-.
T Consensus 101 g~~~a~~~~~~v~ 113 (135)
T 2gf6_A 101 GELTTEGYVIQIA 113 (135)
T ss_dssp TEEEEEEEEEEEE
T ss_pred CEEEEEEEEEEEE
Confidence 9999888776643
No 144
>1wlu_A PAAI protein, phenylacetic acid degradation protein PAAI; thioesterase, hot DOG fold, S genomics; 1.45A {Thermus thermophilus HB8} SCOP: d.38.1.5 PDB: 1j1y_A 1wlv_A* 1wm6_A 1wn3_A* 2dsl_A
Probab=95.72 E-value=0.055 Score=43.31 Aligned_cols=82 Identities=18% Similarity=0.162 Sum_probs=61.8
Q ss_pred HHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEE
Q 040957 331 LHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVS 410 (430)
Q Consensus 331 ~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~ 410 (430)
+|-..++-+.|..+...+. .. + ...+.+.++.|.+|...++++..+++....+......++++|++ |+++|+
T Consensus 38 vhgG~~~~l~d~a~~~~~~-~~---g---~~vt~~~~i~f~~p~~~Gd~l~~~~~v~~~g~~~~~~~~~i~~~-g~~va~ 109 (136)
T 1wlu_A 38 AHGGFLYALADSAFALASN-TR---G---PAVALSCRMDYFRPLGAGARVEARAVEVNLSRRTATYRVEVVSE-GKLVAL 109 (136)
T ss_dssp BCHHHHHHHHHHHHHHHHH-TT---S---CEEEEEEEEEECSCCCTTCEEEEEEEEEEECSSEEEEEEEEEET-TEEEEE
T ss_pred ChHHHHHHHHHHHHHHHHh-cC---C---CEEEEEEEEEEeCCCCCCCEEEEEEEEEECCCcEEEEEEEEEEC-CEEEEE
Confidence 4555566677754322221 11 2 46788899999999999999999999999999999999999998 999999
Q ss_pred EeccceeccC
Q 040957 411 LTQEALLRSP 420 (430)
Q Consensus 411 ~~Q~~l~r~~ 420 (430)
+.-.-++...
T Consensus 110 ~~~~~~~~~~ 119 (136)
T 1wlu_A 110 FTGTVFRLGG 119 (136)
T ss_dssp EEEEEEEC--
T ss_pred EEEEEEEECC
Confidence 8877666543
No 145
>3b7k_A Acyl-coenzyme A thioesterase 12; hotdog fold, structural genomics, structural genomics consor SGC, fatty acid metabolism, hydrolase; HET: COA; 2.70A {Homo sapiens}
Probab=95.69 E-value=0.057 Score=50.69 Aligned_cols=81 Identities=14% Similarity=0.162 Sum_probs=59.3
Q ss_pred CceeehhHHHHHHHHHHh----ccCCCCCcceee-eeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEE---------
Q 040957 161 FGKVFGGQLVGQALAAAS----KTVDCLKIVHSL-HCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQ--------- 226 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~----~~~~~~~~~~s~-~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q--------- 226 (430)
.+.+|||++++++=.|+. ..........++ .+.|++|...+..+.++...++.||+.....+++.-
T Consensus 214 ~G~v~GG~~~~~~D~a~~~~a~~~~~~~~vtv~~~~i~F~~Pv~~Gd~l~~~a~v~~~g~~s~~v~v~v~~~~~~~~~~~ 293 (333)
T 3b7k_A 214 HGNTFGGQIMAWMETVATISASRLCWAHPFLKSVDMFKFRGPSTVGDRLVFTAIVNNTFQTCVEVGVRVEAFDCQEWAEG 293 (333)
T ss_dssp TCBBCHHHHHHHHHHHHHHHHHTSBSSCCEEEEECCEECCSCCBTTCEEEEEEEEEEEETTEEEEEEEEEEECHHHHHHT
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeeeEEcCcccCCCEEEEEEEEEEECCCEEEEEEEEEEEeccCCCCC
Confidence 458999999999765532 222223345566 899999999877899999999999999997766532
Q ss_pred CCeeEEEEEEecccc
Q 040957 227 KGNIIFTLLASFQKE 241 (430)
Q Consensus 227 ~g~~~~~~~~sf~~~ 241 (430)
+++++.++.++|-.-
T Consensus 294 ~~~~~a~a~~t~V~v 308 (333)
T 3b7k_A 294 RGRHINSAFLIYNAA 308 (333)
T ss_dssp CCEEEEEEEEEEECT
T ss_pred cEEEEEEEEEEEEEE
Confidence 245677777777543
No 146
>1q6w_A Monoamine oxidase regulatory protein, putative; structural genomics, nysgxrc T805, hot DOG fold; 2.81A {Archaeoglobus fulgidus} SCOP: d.38.1.4
Probab=95.65 E-value=0.033 Score=46.19 Aligned_cols=81 Identities=16% Similarity=0.112 Sum_probs=59.2
Q ss_pred CCceeehhHHHHHHHHHHhccCCC-CCc------ceeeeeeeccCcCCCCCeEEEEEEeee-----CCCeeEEEEEEE-E
Q 040957 160 KFGKVFGGQLVGQALAAASKTVDC-LKI------VHSLHCYFLLVGDLNIPIIYQVHRVRD-----GNSFATRRVDAI-Q 226 (430)
Q Consensus 160 ~~~~~~GG~~~a~al~Aa~~~~~~-~~~------~~s~~~~Fl~~~~~~~pi~~~V~~lr~-----Gr~~s~~~V~~~-Q 226 (430)
++..++|+.+++++..+.....+. ... ..++.+.|++|..++..+.++++.+.. |+.+.+..+++. |
T Consensus 62 ~~~iahG~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~rF~~PV~~Gd~l~~~~~v~~~~~~~~~~~~v~~~~~~~n~ 141 (161)
T 1q6w_A 62 GKPIAQGMLVLSIALGMVDQVILSNYDVSSVIAFFGIKDVRFLRPVFIGDTIAASAEVVEKQDFDEKSGVVTYKLEVKNQ 141 (161)
T ss_dssp SSCBCCHHHHHHHHHHHHHHHHHTTSBGGGEEEEEEEEEEEECSCCBTTCEEEEEEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred CCcccCHHHHHHHHHhhhhcccCCccccccccccceeEEEEEecCCCCCCEEEEEEEEEEEEecCCCceEEEEEEEEEeC
Confidence 345799999999887666554432 223 567889999999998888887776532 345677778887 8
Q ss_pred CCeeEEEEEEeccc
Q 040957 227 KGNIIFTLLASFQK 240 (430)
Q Consensus 227 ~g~~~~~~~~sf~~ 240 (430)
+|++++.+.+.+..
T Consensus 142 ~g~~v~~~~~~~~~ 155 (161)
T 1q6w_A 142 RGELVLTALYSALI 155 (161)
T ss_dssp TSCEEEEEEEEEEE
T ss_pred CCCEEEEEEEEEEE
Confidence 99999888877643
No 147
>1z54_A Probable thioesterase; hypothetical protein, structural genom NPPSFA, riken structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: d.38.1.1
Probab=95.55 E-value=0.12 Score=40.81 Aligned_cols=79 Identities=11% Similarity=-0.027 Sum_probs=63.9
Q ss_pred CceeehhHHHHHHHHHHhcc---CC----------CCCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEEC
Q 040957 161 FGKVFGGQLVGQALAAASKT---VD----------CLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQK 227 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~---~~----------~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~ 227 (430)
.+.+|+|..+..+-.|+... .+ -...+.++++.|.+|...+..+.+++...+.|++...+..++..+
T Consensus 17 ~g~v~~~~y~~~~~~a~~~~~~~~g~~~~~~~~~~~~~v~~~~~i~y~~~~~~gd~v~v~~~v~~~~~~~~~~~~~i~~~ 96 (132)
T 1z54_A 17 MGVVHHSVYAVYLEAARVDFLERAGLPYHRVEARGVFFPVVELGLTFRAPARFGEVVEVRTRLAELSSRALLFRYRVERE 96 (132)
T ss_dssp TSSBCTTHHHHHHHHHHHHHHHHTTCCHHHHHTTTEECCEEEEEEEECSCCCTTCEEEEEEEEEEECSSEEEEEEEEEET
T ss_pred CCEEehHHHHHHHHHHHHHHHHHcCCCHHHHHhCCcEEEEEEEEEEEeccCCCCCEEEEEEEEEEeCCeEEEEEEEEEEC
Confidence 46899998888776664321 11 124678899999999999889999999999999999999999999
Q ss_pred CeeEEEEEEecc
Q 040957 228 GNIIFTLLASFQ 239 (430)
Q Consensus 228 g~~~~~~~~sf~ 239 (430)
|++++++...+-
T Consensus 97 ~~~~a~~~~~~v 108 (132)
T 1z54_A 97 GVLLAEGFTRHL 108 (132)
T ss_dssp TEEEEEEEEEEE
T ss_pred CEEEEEEEEEEE
Confidence 999888876653
No 148
>2own_A Putative oleoyl-[acyl-carrier protein] thioestera; NP_784467.1, oleoyl thioesterase (putative); 2.00A {Lactobacillus plantarum} SCOP: d.38.1.8 d.38.1.8
Probab=95.41 E-value=0.53 Score=42.20 Aligned_cols=188 Identities=10% Similarity=-0.049 Sum_probs=108.2
Q ss_pred CcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEE-ECCeeEEEEEEeccc--cCCCcccCccCCCCCCCCCCC
Q 040957 185 KIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAI-QKGNIIFTLLASFQK--EEQGFEHQETTMPLVPAPEML 261 (430)
Q Consensus 185 ~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~-Q~g~~~~~~~~sf~~--~~~~~~~~~~~~p~~p~p~~~ 261 (430)
..+..+++.|.++...+.++++++...+-|+....+.-++. ++|++++++....-- .+.+ . | ++-|+++
T Consensus 63 ~vv~~~~i~y~~~~~~gd~l~V~t~v~~~~~~~~~~~~~i~~~~g~~~a~~~~~~v~vd~~~~---r----~-~~ip~~~ 134 (262)
T 2own_A 63 WVVTQYAIDITRMPRQDEVVTIAVRGSAYNPYFAYREFWIRDADGQQLAYITSIWVMMSQTTR---R----I-VKILPEL 134 (262)
T ss_dssp EEEEEEEEEESSCCBTTCEEEEEEEEEEECSSCEEEEEEEECTTCCEEEEEEEEEEEEETTTC---S----E-ECCCGGG
T ss_pred EEEEEeEEEEEecCCCCCEEEEEEEEEecCCcEEEEEEEEEcCCCCEEEEEEEEEEEEEcccC---c----c-ccCCHHH
Confidence 46788999999999999999999999999999999999998 488888887654422 1111 0 0 1112222
Q ss_pred CCHHHHHHhhcCCCCCchhhHhhhhccCCCCCCeEEEEcCCCCCCCCCCCC--CeeEEEEecCCCCCCChHHHHHHHHHH
Q 040957 262 LSMEELRERRLTDPRLPRSYRNKVASKEFVPWPIDIRFCEPNSYTNQSKSP--PSLRYWFRAKGKLSDDQALHRCVVAFA 339 (430)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~~~~~~~~~~~--~~~~~W~R~~~~~~~~~~~~~~~la~~ 339 (430)
... + . .+.. . ... |. .......... .....-+|+.+--...-.-|...+.|+
T Consensus 135 ~~~------~-~---~~~~--~----------~~~-~~---~~~~~~~~~~~~~~~~~~Vr~~D~D~~gHVnn~~Y~~~~ 188 (262)
T 2own_A 135 VAP------Y-Q---SEVV--K----------RIP-RL---PRPISFEATDTTITKPYHVRFFDIDPNRHVNNAHYFDWL 188 (262)
T ss_dssp TGG------G-T---CEEC--S----------SCC-CC---CCCCCCCCCTTCEEEEEECCGGGBCTTSSBCGGGHHHHH
T ss_pred Hhh------c-c---CCcc--c----------ccc-cc---CCCCcccccccceeEEEEeCHHHcCcccCchHHHHHHHH
Confidence 110 0 0 0000 0 000 00 0000000001 122333444321111111123345555
Q ss_pred hhhhhhhhhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEeecceeCC-eeeEEEEEEccCCCEEEEEecccee
Q 040957 340 SDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKA-RGFVSGEMFNTKGELLVSLTQEALL 417 (430)
Q Consensus 340 sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~g-r~~~~~~i~~~~G~lvA~~~Q~~l~ 417 (430)
-|.... ..+. ...-.++.|.|++++..++.+...+.....++. .....-+|++ +|+++|++...-..
T Consensus 189 e~a~~~-~~~~---------~~~v~~~~i~Y~~~~~~gd~l~v~~~v~~~~~~~s~~~~~~i~~-~~~~~a~~~~~~v~ 256 (262)
T 2own_A 189 VDTLPA-TFLL---------QHDLVHVDVRYENEVKYGQTVTAHANILPSEVADQVTTSHLIEV-DDEKCCEVTIQWRT 256 (262)
T ss_dssp HHHSCH-HHHH---------TEEEEEEEEEECSCCCTTCEEEEEEEEECCSSTTEEEEEEEEEE-TTEEEEEEEEEEEE
T ss_pred HHHhHH-HHhh---------cceEEEEEEEEccCcCCCCEEEEEEEEeecCCCceEEEEEEEec-CCEEEEEEEEEEEe
Confidence 553210 1111 135678899999999999999999888777776 6777888998 99999998775443
No 149
>3exz_A MAOC-like dehydratase; Q2RSA1_rhort, NESG, RRR103A, structur genomics, PSI-2, protein structure initiative; 2.30A {Rhodospirillum rubrum}
Probab=95.39 E-value=0.1 Score=42.91 Aligned_cols=88 Identities=9% Similarity=-0.011 Sum_probs=61.0
Q ss_pred CCceeehhHHHHHHH-HHHhccCCCCCccee--eeeeeccCcCCCCCeEEEEEEe--ee-----CCCeeEEEEEE-EECC
Q 040957 160 KFGKVFGGQLVGQAL-AAASKTVDCLKIVHS--LHCYFLLVGDLNIPIIYQVHRV--RD-----GNSFATRRVDA-IQKG 228 (430)
Q Consensus 160 ~~~~~~GG~~~a~al-~Aa~~~~~~~~~~~s--~~~~Fl~~~~~~~pi~~~V~~l--r~-----Gr~~s~~~V~~-~Q~g 228 (430)
++..++|.++++++. ..+....+....+.. +.+.|.+|..++..+.++++.+ +. |+.+.+..+++ -|+|
T Consensus 51 ~~~iahG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~rF~~PV~~GD~L~~~~~v~~~~~~~s~~~~~~v~~~~~~~nq~G 130 (154)
T 3exz_A 51 GGLAASGWHTAAITMRLLVTSGLPLAQGIIGAGTELSWPNPTRPGDELHVETTVLAITPSKSRPDRAIVTCQSDTLNQRG 130 (154)
T ss_dssp CSCCCCHHHHHHHHHHHHHHTTSCBTTCCCEEEEEEECSSCCCTTCEEEEEEEEEEEEECSSCTTEEEEEEEEEEECTTS
T ss_pred CCeecChHHHHHHHHhhhhhccccccceEecceeEEEEcCCCCCCCEEEEEEEEEEEEecccCCCceEEEEEEEEEeCCC
Confidence 345789999999888 766666653333444 4899999999987777776654 42 35566777777 4899
Q ss_pred eeEEEEEEeccccCCCccc
Q 040957 229 NIIFTLLASFQKEEQGFEH 247 (430)
Q Consensus 229 ~~~~~~~~sf~~~~~~~~~ 247 (430)
++++.+.+.+-.....++|
T Consensus 131 e~V~~~~~~~~~~~r~~~~ 149 (154)
T 3exz_A 131 EVVQRSTAKVVVFRRPLEH 149 (154)
T ss_dssp CEEEEEEEEEEEECCCC--
T ss_pred CEEEEEEEEEEEEcccccc
Confidence 9999998887665444443
No 150
>2cwz_A Thioesterase family protein; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.85A {Thermus thermophilus} SCOP: d.38.1.7
Probab=95.34 E-value=0.078 Score=42.93 Aligned_cols=76 Identities=13% Similarity=-0.001 Sum_probs=56.9
Q ss_pred eeehhHHHHHHHHHHhccC----CCCC--cceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEE-CCeeEEEEE
Q 040957 163 KVFGGQLVGQALAAASKTV----DCLK--IVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQ-KGNIIFTLL 235 (430)
Q Consensus 163 ~~~GG~~~a~al~Aa~~~~----~~~~--~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q-~g~~~~~~~ 235 (430)
...||.+++++-.++...+ +++. .-..+++.|++|...+..+..+++.++.||+.....++++. +|++++.+.
T Consensus 33 v~a~~a~~~l~E~~~~~~~~~~l~~g~~~Vg~~i~~~hl~pv~~G~~V~a~a~~~~~~~~~~~~~v~i~d~~g~lv~~g~ 112 (141)
T 2cwz_A 33 VYATYWMVKHMELAGRKIILPFLEEGEEGIGSYVEARHLASALPGMRVRVVARHEKTEGNRVYARVEAYNELGDLIGVGR 112 (141)
T ss_dssp EECHHHHHHHHHHHHHHHHTTTCCTTEEEEEEEEEEEECSCCCTTCEEEEEEEEEEEETTEEEEEEEEEETTCCEEEEEE
T ss_pred HhchHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEEEEEcccCCCCCEEEEEEEEEEECCCEEEEEEEEEECCCCEEEEEE
Confidence 4567777776644443322 3332 24678999999999866899999999999999999999994 568888877
Q ss_pred Eec
Q 040957 236 ASF 238 (430)
Q Consensus 236 ~sf 238 (430)
...
T Consensus 113 ~t~ 115 (141)
T 2cwz_A 113 TEQ 115 (141)
T ss_dssp EEE
T ss_pred EEE
Confidence 644
No 151
>4i83_A 3-hydroxyacyl-[acyl-carrier-protein] dehydratase; FABZ, hot DOG fold, thioesterase, lyase; 2.60A {Neisseria meningitidis}
Probab=95.30 E-value=0.13 Score=42.14 Aligned_cols=80 Identities=10% Similarity=0.003 Sum_probs=57.1
Q ss_pred ceeehhHHHHHHHHHHhcc-CC---CC--Ccceee-eeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEECCeeEEEE
Q 040957 162 GKVFGGQLVGQALAAASKT-VD---CL--KIVHSL-HCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKGNIIFTL 234 (430)
Q Consensus 162 ~~~~GG~~~a~al~Aa~~~-~~---~~--~~~~s~-~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~g~~~~~~ 234 (430)
.++.+=-.+||+..+.... .. +. ..+.++ .+.|.++..|+..++++++.++..+++....++++++|++++.+
T Consensus 64 PGvl~iE~mAQ~~~~~~~~~~~~~~~~~~~~l~gi~~vkF~~pV~PGd~L~i~~~v~~~~~~~~~~~~~~~v~g~~va~~ 143 (152)
T 4i83_A 64 PGVLIIEAMAQACGTLAILSEGGRKENEFFFFAGIDEARFKRQVIPGDQLVFEVELLTSRRGIGKFNAVAKVDGQVAVEA 143 (152)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCCTTTCCCEEEEECSEEECSCCCTTCEEEEEEEEEEEETTEEEEEEEEEETTEEEEEE
T ss_pred cHHHHHHHHHHHHHHHhhhccccccCCceEEEeeecEEEEccccCCCCEEEEEEEEEEeeCCEEEEEEEEEECCEEEEEE
Confidence 3444444667765544221 11 11 123333 78899999998899999999998888999999999999999999
Q ss_pred EEecccc
Q 040957 235 LASFQKE 241 (430)
Q Consensus 235 ~~sf~~~ 241 (430)
..+|...
T Consensus 144 ~l~~~~~ 150 (152)
T 4i83_A 144 IIMCAKR 150 (152)
T ss_dssp EEEEEC-
T ss_pred EEEEEEE
Confidence 9888643
No 152
>2oaf_A Thioesterase superfamily; YP_508616.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; HET: CIT PGE; 2.00A {Jannaschia SP} SCOP: d.38.1.1
Probab=95.29 E-value=0.091 Score=42.79 Aligned_cols=80 Identities=20% Similarity=0.065 Sum_probs=64.2
Q ss_pred CceeehhHHHHHHHHHHhc---c--C-----------CCCCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEE
Q 040957 161 FGKVFGGQLVGQALAAASK---T--V-----------DCLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDA 224 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~---~--~-----------~~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~ 224 (430)
.+.+|+|..+..+-.|+.. . . .-...+.++++.|.+|...+..+++++...+-|++..++..++
T Consensus 31 ~Ghv~~~~yl~~~e~a~~~~~~~~~~G~~~~~l~~~~~~~~vv~~~~i~y~~~~~~gd~v~v~t~v~~~~~~s~~~~~~i 110 (151)
T 2oaf_A 31 AKIAYTGHLPRFALEAIDAWWSEYHGPGGWYHLELDTNVGTPFVRLEMDFKSPVTPRHILKCHTWPTRLGTKSITFRVDG 110 (151)
T ss_dssp TSSBCGGGHHHHHHHHHHHHHHHHTCTTHHHHHHHTTCEECCEEEEEEEECSCCCTTSCEEEEEEEEEECSSEEEEEEEE
T ss_pred CCeEchhHHHHHHHHHHHHHHHhhccCCCHHHHhhccCceEEEEEEEEEECCCCcCCCEEEEEEEEEEeCCcEEEEEEEE
Confidence 4689999888777666321 1 1 1135678899999999999899999999999999999999999
Q ss_pred EECCeeEEEEEEeccc
Q 040957 225 IQKGNIIFTLLASFQK 240 (430)
Q Consensus 225 ~Q~g~~~~~~~~sf~~ 240 (430)
+.+|++++++...+-.
T Consensus 111 ~~~g~~~a~~~~~~v~ 126 (151)
T 2oaf_A 111 VQDGVTCFVGAFTCVF 126 (151)
T ss_dssp EETTEEEEEEEEEEEE
T ss_pred EECCEEEEEEEEEEEE
Confidence 9999999888776643
No 153
>2cwz_A Thioesterase family protein; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.85A {Thermus thermophilus} SCOP: d.38.1.7
Probab=95.18 E-value=0.072 Score=43.17 Aligned_cols=60 Identities=13% Similarity=0.052 Sum_probs=54.5
Q ss_pred eeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEeccceecc
Q 040957 360 ASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEALLRS 419 (430)
Q Consensus 360 ~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~Q~~l~r~ 419 (430)
..+.++.++.|.+|...++.+..+++.......+...+.+++|++|++|+.+..+-++.+
T Consensus 60 ~~Vg~~i~~~hl~pv~~G~~V~a~a~~~~~~~~~~~~~v~i~d~~g~lv~~g~~t~~iv~ 119 (141)
T 2cwz_A 60 EGIGSYVEARHLASALPGMRVRVVARHEKTEGNRVYARVEAYNELGDLIGVGRTEQVILP 119 (141)
T ss_dssp EEEEEEEEEEECSCCCTTCEEEEEEEEEEEETTEEEEEEEEEETTCCEEEEEEEEEEEEE
T ss_pred cEEEEEEEEEEcccCCCCCEEEEEEEEEEECCCEEEEEEEEEECCCCEEEEEEEEEEEec
Confidence 467899999999999999999999999999999999999999999999999999777664
No 154
>2fuj_A Conserved hypothetical protein; structural genomics, conserved hypot protein, hot DOG domain, acyl-COA thioesterase, hydrolase; 1.70A {Xanthomonas campestris PV} SCOP: d.38.1.1
Probab=95.06 E-value=0.18 Score=40.00 Aligned_cols=81 Identities=12% Similarity=0.020 Sum_probs=63.7
Q ss_pred CCceeehhHHHHHHHHHHhccC----------CCCCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEEC--
Q 040957 160 KFGKVFGGQLVGQALAAASKTV----------DCLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQK-- 227 (430)
Q Consensus 160 ~~~~~~GG~~~a~al~Aa~~~~----------~~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~-- 227 (430)
..+.+|+|..+..+-.|+.... +....+.++++.|++|...+..+++++...+-|++...+..+++.+
T Consensus 24 ~~ghv~~~~y~~~~e~a~~~~~~~~g~~~~~~~~~~v~~~~~i~y~~~~~~gd~v~v~~~v~~~~~~s~~~~~~i~~~~~ 103 (137)
T 2fuj_A 24 SMGHVNNAKYISYLEEARVRWMLGVEGVAMTDRIAPVVAATNVNYKRPLVWPNDILVELFVERLGSSSVTIGHRILDQKD 103 (137)
T ss_dssp TTSSBCHHHHHHHHHHHHHHHHHHSSSCCCCCSSEEEEEEEEEEECSCCCTTCCEEEEEEEEEECSSEEEEEEEEEESSC
T ss_pred cCCcccHHHHHHHHHHHHHHHHHHhCcccccCCceEEEEEEEeEEeCCccCCCEEEEEEEEEEecCcEEEEEEEEEeCCC
Confidence 3568999998888766653321 1124578899999999999889999999999999999999999863
Q ss_pred -CeeEEEEEEeccc
Q 040957 228 -GNIIFTLLASFQK 240 (430)
Q Consensus 228 -g~~~~~~~~sf~~ 240 (430)
|++++.+...+-.
T Consensus 104 ~g~~~a~~~~~~v~ 117 (137)
T 2fuj_A 104 EGVLYSDGNVVVVW 117 (137)
T ss_dssp TTCEEEEEEEEEEE
T ss_pred CCeEEEEEEEEEEE
Confidence 7888888776543
No 155
>1s5u_A Protein YBGC; structural genomics, hypothetical protein, thioesterase fold, PSI, protein structure initiative; 1.70A {Escherichia coli} SCOP: d.38.1.1
Probab=95.06 E-value=0.088 Score=41.91 Aligned_cols=80 Identities=9% Similarity=-0.042 Sum_probs=64.3
Q ss_pred CceeehhHHHHHHHHHHhcc---CC----------CCCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEE-EE
Q 040957 161 FGKVFGGQLVGQALAAASKT---VD----------CLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDA-IQ 226 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~---~~----------~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~-~Q 226 (430)
.+.+++|..+..+-.|+... .+ -...+.++++.|.+|...+..+++++...+.|++...+..++ ..
T Consensus 22 ~g~v~~~~y~~~~~~a~~~~~~~~g~~~~~~~~~g~~~v~~~~~i~y~~~~~~gd~v~v~~~v~~~~~~s~~~~~~i~~~ 101 (138)
T 1s5u_A 22 GGVVYHASYVAFYERARTEMLRHHHFSQQALMAERVAFVVRKMTVEYYAPARLDDMLEIQTEITSMRGTSLVFTQRIVNA 101 (138)
T ss_dssp TSSBCHHHHHHHHHHHHHHHHHHTTCCHHHHHHTTCEEEEEEEEEEECSCCCTTCEEEEEEEEEEECSSEEEEEEEEECT
T ss_pred CceEeHHHHHHHHHHHHHHHHHHcCCCHHHHHhCCCEEEEEEEEEEECCcccCCCEEEEEEEEEEeCCeEEEEEEEEEec
Confidence 56899999888777765322 11 124567899999999999889999999999999999999999 88
Q ss_pred CCeeEEEEEEeccc
Q 040957 227 KGNIIFTLLASFQK 240 (430)
Q Consensus 227 ~g~~~~~~~~sf~~ 240 (430)
+|++++.+...+-.
T Consensus 102 ~g~~~a~~~~~~v~ 115 (138)
T 1s5u_A 102 ENTLLNEAEVLVVC 115 (138)
T ss_dssp TCCEEEEEEEEEEE
T ss_pred CCEEEEEEEEEEEE
Confidence 89999888777643
No 156
>2prx_A Thioesterase superfamily protein; ZP_00837258.1, structural joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.50A {Shewanella loihica}
Probab=95.06 E-value=0.037 Score=45.77 Aligned_cols=90 Identities=9% Similarity=-0.104 Sum_probs=59.0
Q ss_pred HHHHHHHHHHhhhhhhhh----hcccCccC----CCcceeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEE
Q 040957 330 ALHRCVVAFASDLIFSSV----SLNPHRRK----GFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMF 401 (430)
Q Consensus 330 ~~~~~~la~~sD~~~~~~----~~~~~~~~----~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~ 401 (430)
.+|-..++-+.|...+.. .+...+.. .......+.+.++.|++|+..++++..+.+....+......+++++
T Consensus 56 ~vhGG~~~~l~D~~~~g~a~~~~~~~~g~~~~~~~~~~~~vt~~~~i~f~~pv~~gd~l~~~a~v~~~g~~~~~~~~~i~ 135 (160)
T 2prx_A 56 FVYGGLIASLIDCHGTGSASAAAQRALEQAGEQLDEPPRFVTAALNIDYLAPTPMGVELELVGEIKEVKPRKVVVEIALS 135 (160)
T ss_dssp BBCHHHHHHHHHHHHHHHHHHHHC-------------CCEEEEEEEEEECSCCBTTSCEEEEEEEEEC--CEEEEEEEEE
T ss_pred ceeHHHHHHHHHhhhhHHHHHHHHhhcccccccccCceEEEEEEEEEEEecCcCCCCEEEEEEEEEEecCCEEEEEEEEE
Confidence 456666777888632121 12111100 0112467888999999999999999999999999999999999999
Q ss_pred ccCCCEEEEEeccceeccC
Q 040957 402 NTKGELLVSLTQEALLRSP 420 (430)
Q Consensus 402 ~~~G~lvA~~~Q~~l~r~~ 420 (430)
+ +|+++|++.-.-++...
T Consensus 136 ~-~g~~va~a~~~~~~~~~ 153 (160)
T 2prx_A 136 A-DGKLCARGHMVAVKMPE 153 (160)
T ss_dssp C----CCEEEEEEEEECC-
T ss_pred E-CCEEEEEEEEEEEEECC
Confidence 8 79999998887766543
No 157
>3lmb_A Uncharacterized protein; protein OLEI01261, unknown function, chlorobaculum tepidum T structural genomics, PSI2, MCSG; HET: MSE; 2.10A {Oleispira antarctica rb-8} SCOP: d.38.1.0
Probab=94.88 E-value=0.016 Score=48.35 Aligned_cols=98 Identities=11% Similarity=0.080 Sum_probs=64.5
Q ss_pred CccccceeecccCCCCC--CCceeehhHHHHHHHH---H----HhccCCCCC--cceeeeeeeccCcCCCCCeEEEEE--
Q 040957 143 EPVEVNIFQGITLPDAP--KFGKVFGGQLVGQALA---A----ASKTVDCLK--IVHSLHCYFLLVGDLNIPIIYQVH-- 209 (430)
Q Consensus 143 ~~~~~~~f~~~~~~~~~--~~~~~~GG~~~a~al~---A----a~~~~~~~~--~~~s~~~~Fl~~~~~~~pi~~~V~-- 209 (430)
..++++..+...+..+. ..+..|||.+.++|-. + ++...+.+. ...+.++.|++|+..+.-+++++.
T Consensus 33 ~~~~~~~~~~~~pl~~n~N~~gT~fGGslfslad~a~~~~~~l~~~~~g~~~~vv~~~~~I~yl~P~~~~~~a~~~~~~~ 112 (165)
T 3lmb_A 33 ESYDGDTLILTAPLEPNINDKQTAFGGSLYNAAVMACWGMVYLKTQEENIACNQVVTEGNMKYIAPVYGRIRAICHAPDE 112 (165)
T ss_dssp EEECSSEEEEEECSGGGBCTTSSBCHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEEEEECSCCCSCEEEEEECCCH
T ss_pred EEEcCCEEEEEEEcCCCcCCCCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEEeEEEEccCccCCeEEEEEeCcH
Confidence 34455555554443322 3458999999999842 2 122222122 355789999999987533344442
Q ss_pred ---------EeeeCCCeeEEEEEEEECC---------eeEEEEEEeccc
Q 040957 210 ---------RVRDGNSFATRRVDAIQKG---------NIIFTLLASFQK 240 (430)
Q Consensus 210 ---------~lr~Gr~~s~~~V~~~Q~g---------~~~~~~~~sf~~ 240 (430)
..+.||..-+..|+++.++ +++...+..|..
T Consensus 113 ~~~~~i~~~l~~~gK~~~~l~v~I~d~~~~~~~~~~~~~~a~~~g~y~~ 161 (165)
T 3lmb_A 113 EELANFFDHFERKGKARISLEAAIYNDACVMKIEPETKPSVKFNGQYAI 161 (165)
T ss_dssp HHHHHHHHHHHHHSEEEEEEEEEEESCTTCCSCCTTSCCSEEEEEEEEE
T ss_pred HHHHHHHHHHHhCCceEEEEEEEEEeCCccccccccceEEEEEEEEEEE
Confidence 2689999999999999988 888888887743
No 158
>2hx5_A Hypothetical protein; thioesterase/thiol ester dehydrase-isomerase fold, structura genomics, joint center for structural genomics, JCSG; 1.50A {Prochlorococcus marinus} SCOP: d.38.1.1
Probab=94.81 E-value=0.14 Score=41.60 Aligned_cols=80 Identities=9% Similarity=-0.089 Sum_probs=63.9
Q ss_pred CceeehhHHHHHHHHHHhcc-----C------CC----------CCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeE
Q 040957 161 FGKVFGGQLVGQALAAASKT-----V------DC----------LKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFAT 219 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~-----~------~~----------~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~ 219 (430)
.+.+|+|..+..+-.|+... . .. ...+.++++.|.+|...+..+++++...+-|++..+
T Consensus 22 ~Ghv~~~~yl~~~e~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~vv~~~~i~y~~p~~~gd~i~v~t~v~~~~~~s~~ 101 (152)
T 2hx5_A 22 AGVMHFHQLFRWCHESWEESLESYGLNPADIFPGSRKSEVTPEVALPIIHCQADFRRPIHTGDALAMELRPERLNPNSFQ 101 (152)
T ss_dssp TSSBCTTHHHHHHHHHHHHHHHHHTCCHHHHCTTCTTCSSCCSEECCEEEEEEEECSCCCTTCEEEEEEEEEEEETTEEE
T ss_pred CCeEecHHHHHHHHHHHHHHHHHcCCCHHHHhhhhcccccCCceEEEEEEEEEEEcCCCCCCCEEEEEEEEEEeCCcEEE
Confidence 45789998887776653211 1 11 256788999999999998899999999999999999
Q ss_pred EEEEEEECCeeEEEEEEeccc
Q 040957 220 RRVDAIQKGNIIFTLLASFQK 240 (430)
Q Consensus 220 ~~V~~~Q~g~~~~~~~~sf~~ 240 (430)
+..+++.+|++++++...+-.
T Consensus 102 ~~~~i~~~g~~~a~~~~~~v~ 122 (152)
T 2hx5_A 102 VHFEFRCEEQIAAHALIRHLA 122 (152)
T ss_dssp EEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEEEECCEEEEEEEEEEEE
Confidence 999999999999888776643
No 159
>1lo7_A 4-hydroxybenzoyl-COA thioesterase; hot DOG fold, catalytic mechanism, hydrolase; HET: 4CO; 1.50A {Pseudomonas SP} SCOP: d.38.1.1 PDB: 1bvq_A* 1lo8_A* 1lo9_A*
Probab=94.75 E-value=0.2 Score=39.85 Aligned_cols=79 Identities=9% Similarity=-0.073 Sum_probs=63.1
Q ss_pred CceeehhHHHHHHHHHHhcc---C--C---------C--CCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEE
Q 040957 161 FGKVFGGQLVGQALAAASKT---V--D---------C--LKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDA 224 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~---~--~---------~--~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~ 224 (430)
.+.+|+|..+..+-.|+... . + . ...+.++++.|.+|...+..+.+++...+-|++...+..++
T Consensus 19 ~G~v~~~~y~~~~e~a~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~i~y~~p~~~gd~v~v~~~v~~~~~~s~~~~~~i 98 (141)
T 1lo7_A 19 AGIVWYPNYHRWLDAASRNYFIKCGLPPWRQTVVERGIVGTPIVSCNASFVCTASYDDVLTIETCIKEWRRKSFVQRHSV 98 (141)
T ss_dssp TSSBCTHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHCEEECCEEEEEEEECSCCCTTCEEEEEEEEEEECSSEEEEEEEE
T ss_pred cceEchhHHHHHHHHHHHHHHHHhCCCHHHHhhhhccceeEEEEEEEEEEcCCCCCCCEEEEEEEEEEEcceEEEEEEEE
Confidence 56899999888877764211 1 1 1 24577899999999999889999999999999999999999
Q ss_pred EE----CC-eeEEEEEEecc
Q 040957 225 IQ----KG-NIIFTLLASFQ 239 (430)
Q Consensus 225 ~Q----~g-~~~~~~~~sf~ 239 (430)
+. +| ++++++...+-
T Consensus 99 ~~~~~~~g~~~~a~~~~~~v 118 (141)
T 1lo7_A 99 SRTTPGGDVQLVMRADEIRV 118 (141)
T ss_dssp EEECTTSCEEEEEEEEEEEE
T ss_pred EECCCCCCcEEEEEEEEEEE
Confidence 87 88 88888876654
No 160
>3d6x_A (3R)-hydroxymyristoyl-[acyl-carrier-protein] DEHY; FABZ, hot DOG fold, dehydratase, lipid biosynthesis, lipid synthesis, lyase; HET: MSE; 2.59A {Campylobacter jejuni subsp}
Probab=94.48 E-value=0.24 Score=40.06 Aligned_cols=50 Identities=12% Similarity=0.026 Sum_probs=44.3
Q ss_pred eeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEECCeeEEEEEEeccc
Q 040957 191 HCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKGNIIFTLLASFQK 240 (430)
Q Consensus 191 ~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~g~~~~~~~~sf~~ 240 (430)
.+.|.+|..++..++++++.++..+++....++++++|++++.+.+.+..
T Consensus 94 ~~kf~~pV~pGd~l~~~~~v~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~ 143 (146)
T 3d6x_A 94 GAKFRNPVRPGDRLDYEMSVVKNRGNMWIFKGQAFVDGNLVAEAELKAMI 143 (146)
T ss_dssp EEEECSCCCTTCEEEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred eeEECcccCCCCEEEEEEEEEEeeCCEEEEEEEEEECCEEEEEEEEEEEE
Confidence 58899999998899999999988788889999999999999999887643
No 161
>3ir3_A HTD2, 3-hydroxyacyl-thioester dehydratase 2; structural GENO structural genomics consortium, SGC, lyase; 1.99A {Homo sapiens}
Probab=94.41 E-value=0.25 Score=40.17 Aligned_cols=81 Identities=10% Similarity=-0.072 Sum_probs=56.4
Q ss_pred CceeehhHHHHHHHHHHhccCCC-CCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEE--ECCeeEEEEEEe
Q 040957 161 FGKVFGGQLVGQALAAASKTVDC-LKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAI--QKGNIIFTLLAS 237 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~~~~-~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~--Q~g~~~~~~~~s 237 (430)
+.-++|.++++++........+. +....+..+.|.+|..++..+.++++..+..++.....+++. |+|++++.+.+.
T Consensus 60 ~~iahG~~~~~l~~~~~~~~~~~~~~~~~~~~~rf~~PV~~Gd~l~~~~~v~~~~~~~~~v~~~~~~~~~G~~V~~g~~~ 139 (148)
T 3ir3_A 60 NTIVHGVLINGLISALLGTKMPGPGCVFLSQEISFPAPLYIGEVVLASAEVKKLKRFIAIIAVSCSVIESKKTVMEGWVK 139 (148)
T ss_dssp -CBCCHHHHHHHHHHHHHHTSSCTTCEEEEEEEECCSCCBTTCEEEEEEEEEEEETTEEEEEEEEEETTTCCEEEEEEEE
T ss_pred CcccchHHHHHHHHHHHHhhcCCCceEEEEEEEEECCCcCCCCEEEEEEEEEEEcCCeEEEEEEEEEcCCCCEEEEEEEE
Confidence 34689999888876655555542 334567899999999998888887766654444444455544 789999998887
Q ss_pred cccc
Q 040957 238 FQKE 241 (430)
Q Consensus 238 f~~~ 241 (430)
+..+
T Consensus 140 ~~~~ 143 (148)
T 3ir3_A 140 VMVP 143 (148)
T ss_dssp EECC
T ss_pred EEec
Confidence 6543
No 162
>1t82_A Hypothetical acetyltransferase; structural genomics, alpha-beta dimeric protein with A fold resembling A hotdog, PSI; 1.70A {Shewanella oneidensis} SCOP: d.38.1.5
Probab=94.37 E-value=0.065 Score=44.17 Aligned_cols=83 Identities=6% Similarity=-0.025 Sum_probs=52.4
Q ss_pred HHHHHHHHHHhhhhhhh---hhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEeec------ceeCCee--eEEE
Q 040957 330 ALHRCVVAFASDLIFSS---VSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSP------VASKARG--FVSG 398 (430)
Q Consensus 330 ~~~~~~la~~sD~~~~~---~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~------~~~~gr~--~~~~ 398 (430)
..|-.+++-++|..+-. ..++.. +......+++.+|.|.+|...+ +..+++.. ....||. ..++
T Consensus 59 tvHGG~l~tLaD~a~g~a~~~~~~~~---g~~~~~vt~~~~i~flrpa~~~--l~a~a~~~~~~~~~~~~~gr~~~~~~v 133 (155)
T 1t82_A 59 TMFAGSIYTIMTLTGWGMVWLQQQLL---NVDGDIVLADAHIRYLAPVTSA--PEVKVRWPDTNLSPLQRGRKAKVKLEV 133 (155)
T ss_dssp SBCHHHHHHHHHHHHHHHHHHHHHHH---TCCCEEEEEEEEEEECSCCCSC--CEEEEECCSCCCGGGGGTCCEEEEEEE
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHh---CCCceEEEEEEEEEEecccCCC--EEEEEEeCHHHHHHHHhCCceEEEEEE
Confidence 34666777788863221 122222 1123467999999999976643 55665433 2355654 4568
Q ss_pred EEEccCCCEEEEEeccceec
Q 040957 399 EMFNTKGELLVSLTQEALLR 418 (430)
Q Consensus 399 ~i~~~~G~lvA~~~Q~~l~r 418 (430)
+|+|++| +||.++..-.+.
T Consensus 134 ~i~d~~g-lvA~~~~t~~i~ 152 (155)
T 1t82_A 134 QLFCDGK-LCAQFDGLYVSV 152 (155)
T ss_dssp EEEETTE-EEEEEEEEEEEE
T ss_pred EEEECCc-CEEEEEEEEEEe
Confidence 9999999 999999655554
No 163
>2q78_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE MLC; 2.20A {Thermotoga maritima MSB8} SCOP: d.38.1.7
Probab=94.35 E-value=0.2 Score=40.92 Aligned_cols=77 Identities=10% Similarity=-0.102 Sum_probs=60.7
Q ss_pred ceeehhHHHHHHHHHHhccC----CCCCc--ceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEECCeeEEEEE
Q 040957 162 GKVFGGQLVGQALAAASKTV----DCLKI--VHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKGNIIFTLL 235 (430)
Q Consensus 162 ~~~~GG~~~a~al~Aa~~~~----~~~~~--~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~g~~~~~~~ 235 (430)
....||.++|++=.||...+ +++.. -..+.+.+++|...+..+.++++.++.+++..+.+|+++.+++.+..++
T Consensus 46 ~VlaTpamvaLmE~aa~~~v~~~L~eg~~tVG~~v~v~Hlapt~~G~~Vta~A~l~~v~gr~l~f~V~A~d~~~~Ig~Gt 125 (153)
T 2q78_A 46 HLVATSALIGVVHRVSYELLSRYLPNDYTAVVVETLARHVKAVPTGTRVAVGVRVVGVVGNRVKFRGIVMSGDEKILEAE 125 (153)
T ss_dssp CBBCHHHHHHHHHHHHHHHHHTTSCTTEEEEEEEEEEEECSCCBSSEEEEEEEEEEEEETTEEEEEEEEEETTEEEEEEE
T ss_pred CEeecHHHHHHHHHHHHHHHHhhCCCCceEEEEEEEeEECcCCCCCCEEEEEEEEEEECCCEEEEEEEEEECCceEEEEE
Confidence 45677788888777765544 33322 2568999999999877999999999999999999999999888877776
Q ss_pred Eec
Q 040957 236 ASF 238 (430)
Q Consensus 236 ~sf 238 (430)
..-
T Consensus 126 h~R 128 (153)
T 2q78_A 126 FVR 128 (153)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 164
>2gll_A FABZ, (3R)-hydroxymyristoyl-acyl carrier protein dehydratase; lyase; 2.20A {Helicobacter pylori} PDB: 2glm_A* 2glp_A* 2glv_A 3dp1_A* 3cf8_A* 3cf9_A* 3d04_A* 3doy_A* 3doz_A* 3dp0_A* 3b7j_A* 3dp2_A* 3dp3_A* 3ed0_A*
Probab=94.25 E-value=0.21 Score=41.86 Aligned_cols=50 Identities=8% Similarity=-0.012 Sum_probs=45.0
Q ss_pred eeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEECCeeEEEEEEeccc
Q 040957 191 HCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKGNIIFTLLASFQK 240 (430)
Q Consensus 191 ~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~g~~~~~~~~sf~~ 240 (430)
.+.|.+|..|+..++++++.++..+.+....++++++|++++.+.+.+..
T Consensus 118 ~vkF~~pV~PGD~L~i~v~v~~~~~~~~~~~~~~~v~g~~va~g~~~~~~ 167 (171)
T 2gll_A 118 KVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMI 167 (171)
T ss_dssp EEEECSCCCTTCEEEEEEEEEEESSSEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEECCccCCCCEEEEEEEEEEEeCCEEEEEEEEEECCEEEEEEEEEEEE
Confidence 68899999998899999999998888999999999999999999887654
No 165
>3ck1_A Putative thioesterase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.74A {Ralstonia eutropha}
Probab=94.07 E-value=0.17 Score=40.94 Aligned_cols=80 Identities=18% Similarity=0.139 Sum_probs=63.4
Q ss_pred CceeehhHHHHHHHHHHhcc----CC---------C--CCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEE
Q 040957 161 FGKVFGGQLVGQALAAASKT----VD---------C--LKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAI 225 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~----~~---------~--~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~ 225 (430)
.+.+|+|..+..+-.|+... .+ . ...+.++++.|.+|...+..+++++...+.|++...+..+++
T Consensus 20 ~ghv~~~~y~~~~e~a~~~~~~~~~g~~~~~~~~~~~~~~vv~~~~i~y~~~~~~gd~v~v~~~v~~~~~~s~~~~~~i~ 99 (150)
T 3ck1_A 20 AGIVFYPRYFEMLNDFIEDWFAQALDWPFDAMHGAGQAGVPTADLHCRFVAPSRLGETLTRELRVVKLGQSSFTVQVRFM 99 (150)
T ss_dssp TSBBCHHHHHHHHHHHHHHHHHHTSSCCHHHHHTTTCEECCEEEEEEEECSCCBTTCEEEEEEEEEEECSSEEEEEEEEE
T ss_pred CceEcHHHHHHHHHHHHHHHHHHHcCCCHHHHHhhcCceeEEEEEEEEEeCCCcCCCEEEEEEEEEEEcCcEEEEEEEEE
Confidence 56899999888776663211 11 1 246788999999999998899999999999999999999998
Q ss_pred EC-CeeEEEEEEeccc
Q 040957 226 QK-GNIIFTLLASFQK 240 (430)
Q Consensus 226 Q~-g~~~~~~~~sf~~ 240 (430)
.+ |++++++...+-.
T Consensus 100 ~~~g~~~a~~~~~~v~ 115 (150)
T 3ck1_A 100 GPDSGLRLEVTQRLVC 115 (150)
T ss_dssp CTTSCEEEEEEEEEEC
T ss_pred eCCCEEEEEEEEEEEE
Confidence 76 8888888776643
No 166
>3kuv_A Fluoroacetyl coenzyme A thioesterase; fluoroacetyl-COA thioesterase FLK, hot DOG folding, thioeste hydrolase; 1.50A {Streptomyces cattleya} PDB: 3kuw_A 3kvu_A* 3p2q_A 3p2r_A 3p2s_A 3kv7_A 3kv8_A 3kvz_A* 3kw1_A* 3kx7_A 3kx8_A 3kvi_A 3p3i_A 3p3f_A
Probab=94.07 E-value=0.23 Score=39.91 Aligned_cols=75 Identities=11% Similarity=-0.043 Sum_probs=60.9
Q ss_pred eeehhHHHHHHHHHHhccCC----CCC--cceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEECCeeEEEEEE
Q 040957 163 KVFGGQLVGQALAAASKTVD----CLK--IVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKGNIIFTLLA 236 (430)
Q Consensus 163 ~~~GG~~~a~al~Aa~~~~~----~~~--~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~g~~~~~~~~ 236 (430)
..-+|.++|++=.||...+. ++. .=.++++.|++|...+..++.+++.++-+++.-..+|+++.+++++..+..
T Consensus 39 VlaTpamvalmE~aa~~~~~~~L~~g~~tVG~~v~v~Hlapt~~G~~V~~~a~l~~v~gr~~~f~v~a~d~~~~I~~G~h 118 (139)
T 3kuv_A 39 VFASGFMVGLMEWACVRAMAPYLEPGEGSLGTAICVTHTAATPPGLTVTVTAELRSVEGRRLSWRVSAHDGVDEIGSGTH 118 (139)
T ss_dssp CBCHHHHHHHHHHHHHHHTGGGCCTTEEEEEEEEEEECCSCCCTTSEEEEEEEEEEEETTEEEEEEEEECSSSEEEEEEE
T ss_pred EEeHHHHHHHHHHHHHHHHHhhCCCCCeEEEEEEEEEEccCCCCCCEEEEEEEEEEECCCEEEEEEEEEECCEEEEEEEE
Confidence 45677788888777776654 222 234689999999999889999999999999999999999999888877766
Q ss_pred e
Q 040957 237 S 237 (430)
Q Consensus 237 s 237 (430)
.
T Consensus 119 ~ 119 (139)
T 3kuv_A 119 E 119 (139)
T ss_dssp E
T ss_pred E
Confidence 4
No 167
>2nuj_A Thioesterase superfamily; YP_509914.1, structural genomics, protein structure initiative, joint center for structural G JCSG, hydrolase; 2.00A {Jannaschia} SCOP: d.38.1.1
Probab=94.03 E-value=0.14 Score=42.38 Aligned_cols=80 Identities=9% Similarity=-0.020 Sum_probs=63.8
Q ss_pred CCceeehhHHHHHHHHHHhccC-----C------CCCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEE-C
Q 040957 160 KFGKVFGGQLVGQALAAASKTV-----D------CLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQ-K 227 (430)
Q Consensus 160 ~~~~~~GG~~~a~al~Aa~~~~-----~------~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q-~ 227 (430)
..+.+|+|..+..+-.|+.... + -...+.++++.|.++...+..+.+++...+-|++...+..+++. +
T Consensus 40 ~~Ghv~~~~y~~~~e~a~~~~~~~~g~~~~~~~~~~~v~~~~~i~y~~~~~~gd~i~v~t~v~~~~~~s~~~~~~i~~~~ 119 (163)
T 2nuj_A 40 AIGHVNHTAYLRWYESFRLPFLKARHVTDYGPTSPRLVLKQVHCTYLAEMGMGEDYVITGRVSNFRTTSFTMEFACWRLG 119 (163)
T ss_dssp TTSSBCHHHHHHHHHHHHHHHHHHTTSCCCSSSSCEEEEEEEEEEECSCCCTTCEEEEEEEEEEECSSEEEEEEEEEECS
T ss_pred cCCeEchHHHHHHHHHHHHHHHHHcCCcchhccCceEEEEEEEEEEecCccCCCEEEEEEEEEEeCCcEEEEEEEEEeCC
Confidence 3568999998887766653321 1 12457889999999999988999999999999999999999998 8
Q ss_pred CeeEEEEEE--ecc
Q 040957 228 GNIIFTLLA--SFQ 239 (430)
Q Consensus 228 g~~~~~~~~--sf~ 239 (430)
|++++++.. .+-
T Consensus 120 g~~~a~~~~~~~~v 133 (163)
T 2nuj_A 120 DAVECTSEGSAVVV 133 (163)
T ss_dssp SSCEEEEEEEEEEE
T ss_pred CEEEEEEEEeeEEE
Confidence 888888877 553
No 168
>2eis_A Hypothetical protein TTHB207; COA binding motif, NPPSFA, national project on protein struc functional analyses; HET: COA; 2.10A {Thermus thermophilus}
Probab=93.80 E-value=0.76 Score=36.00 Aligned_cols=53 Identities=13% Similarity=-0.022 Sum_probs=47.3
Q ss_pred eeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccC-----C-CEEEEEeccceecc
Q 040957 367 SMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTK-----G-ELLVSLTQEALLRS 419 (430)
Q Consensus 367 si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~-----G-~lvA~~~Q~~l~r~ 419 (430)
++.|++|+..++++..+++....++.......++++.+ | +++|++....+...
T Consensus 53 ~i~f~~pv~~gd~l~v~~~v~~~g~~s~~~~~~i~~~~~~~~~~~~~~a~~~~~~v~vd 111 (133)
T 2eis_A 53 AVDFKRPVPLGAIVELVARLKEVGRTSMRVEVEMWVEPVKEGEEAYLAARGGFVLVAVD 111 (133)
T ss_dssp EEEECSCCBTTCEEEEEEEEEEECSSEEEEEEEEEECCCSTTCCCEEEEEEEEEEEEBC
T ss_pred cEEEcccccCCCEEEEEEEEEEeCCcEEEEEEEEEEecCCCCceeEEEEEEEEEEEEEC
Confidence 79999999999999999999999999999999999874 7 89999988776654
No 169
>1njk_A Hypothetical protein YBAW; structural genomics, thioesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.90A {Escherichia coli} SCOP: d.38.1.1
Probab=93.75 E-value=0.34 Score=39.55 Aligned_cols=81 Identities=9% Similarity=-0.009 Sum_probs=63.6
Q ss_pred CCceeehhHHHHHHHHHHhcc------------CCCCCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEE-
Q 040957 160 KFGKVFGGQLVGQALAAASKT------------VDCLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQ- 226 (430)
Q Consensus 160 ~~~~~~GG~~~a~al~Aa~~~------------~~~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q- 226 (430)
..+.+|+|..+..+-.|+... -+-...+.++++.|++|...+..+++++...+-|++...+..+++.
T Consensus 36 ~~Ghv~n~~y~~~~e~ar~~~~~~~g~~~~~~~~g~~~v~~~~~i~y~~p~~~gd~l~v~~~v~~~g~~s~~~~~~i~~~ 115 (156)
T 1njk_A 36 VYQHVNNARYLEFLEEARWDGLENSDSFQWMTAHNIAFVVVNININYRRPAVLSDLLTITSQLQQLNGKSGILSQVITLE 115 (156)
T ss_dssp TTSSBCHHHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEEEEEEEECSCCCTTCEEEEEEEEEEEETTEEEEEEEEEET
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHcCCchHHHhCCceEEEEEEEEEEeCCCCCCCEEEEEEEEEEeCCeEEEEEEEEEEC
Confidence 356899999888877663221 1112357889999999999988999999999999999999999974
Q ss_pred -CCeeEEEEEEeccc
Q 040957 227 -KGNIIFTLLASFQK 240 (430)
Q Consensus 227 -~g~~~~~~~~sf~~ 240 (430)
+|++++++...+-.
T Consensus 116 ~~g~~~a~~~~~~v~ 130 (156)
T 1njk_A 116 PEGQVVADALITFVC 130 (156)
T ss_dssp TTTEEEEEEEEEEEE
T ss_pred CCCeEEEEEEEEEEE
Confidence 78898888776643
No 170
>4h4g_A (3R)-hydroxymyristoyl-[acyl-carrier-protein] DEHY; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Burkholderia thailandensis}
Probab=93.51 E-value=0.68 Score=38.18 Aligned_cols=80 Identities=14% Similarity=-0.050 Sum_probs=57.9
Q ss_pred ceeehhHHHHHHHHHHhccCC--C---CC--cceee-eeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEECCeeEEE
Q 040957 162 GKVFGGQLVGQALAAASKTVD--C---LK--IVHSL-HCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKGNIIFT 233 (430)
Q Consensus 162 ~~~~GG~~~a~al~Aa~~~~~--~---~~--~~~s~-~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~g~~~~~ 233 (430)
.++.+=-.+||+..+...... . +. .+.++ .+.|.++..|+..++++|+.++..+++.....+++-+|++++.
T Consensus 67 PGvL~iEamAQ~~~~l~~~~~~~~~~~~~~~~l~~i~~~kF~~~V~PGd~L~i~v~~~~~~~~~~~~~~~~~v~g~~va~ 146 (160)
T 4h4g_A 67 PGVLIIEALAQAAALLTFAEAEPKDPENTLYYFVGIDNARFKRVVEPGDQLILNVTFERYIRGIWKFKAVAEVDGKVAAE 146 (160)
T ss_dssp CHHHHHHHHHHHHHHHHHTTC--------CEEEEEEEEEEECSCCCTTCEEEEEEEEEEEETTEEEEEEEEEETTEEEEE
T ss_pred cHHHHHHHHHHHHHHHHhhhccccCCceeEEEEeccceEEECcccCCCCEEEEEEEEEEeeCCEEEEEEEEEECCEEEEE
Confidence 334444567776554432221 1 11 12333 5679999999889999999999999999999999999999999
Q ss_pred EEEecccc
Q 040957 234 LLASFQKE 241 (430)
Q Consensus 234 ~~~sf~~~ 241 (430)
+..+|.-.
T Consensus 147 ael~~~~~ 154 (160)
T 4h4g_A 147 AELMCTVK 154 (160)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEc
Confidence 99888654
No 171
>2o5u_A Thioesterase; putative thioesterese,, hydrolase; 1.91A {Pseudomonas aeruginosa} SCOP: d.38.1.1 PDB: 2av9_A 2o6t_A 2o6b_A 2o6u_A
Probab=93.38 E-value=0.37 Score=38.80 Aligned_cols=79 Identities=14% Similarity=0.033 Sum_probs=61.7
Q ss_pred CceeehhHHHHHHHHHHhccC-----C----C--CCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEE--C
Q 040957 161 FGKVFGGQLVGQALAAASKTV-----D----C--LKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQ--K 227 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~~-----~----~--~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q--~ 227 (430)
.+.+|+|..+..+-.|+.... + . ...+.++++.|.+|...+..+++++...+-|++..++..+++. +
T Consensus 29 ~ghv~~~~y~~~~~~a~~~~~~~~g~~~~~~~~~~~vv~~~~i~y~~~~~~gd~v~v~t~v~~~~~~s~~~~~~i~~~~~ 108 (148)
T 2o5u_A 29 YGHVNNVTYYAFFDTAVNTYLIERGGLDIQGGEVIGLVVSSSCDYFAPVAFPQRIEMGLRVARLGNSSVQYELALFLEGQ 108 (148)
T ss_dssp TSSBCHHHHHHHHHHHHHHHHHHHHCCCTTTCSEEEEEEEEEEEECSCCCTTSCEEEEEEEEEECSSEEEEEEEEEESSC
T ss_pred CCcCchhHHHHHHHHHHHHHHHHhCCcccccCCceeEEEEEEEEEcCcccCCCEEEEEEEEEEeCCcEEEEEEEEEECCC
Confidence 568999998877766543221 1 1 1457889999999999989999999999999999999999986 4
Q ss_pred CeeEEEEEEecc
Q 040957 228 GNIIFTLLASFQ 239 (430)
Q Consensus 228 g~~~~~~~~sf~ 239 (430)
|++++++...+-
T Consensus 109 g~~~a~~~~~~v 120 (148)
T 2o5u_A 109 REACAAGRFVHV 120 (148)
T ss_dssp CBCSEEEEEEEE
T ss_pred ceEEEEEEEEEE
Confidence 778877766553
No 172
>2hlj_A Hypothetical protein; putative thioesterase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.00A {Pseudomonas putida} SCOP: d.38.1.1
Probab=93.31 E-value=0.76 Score=37.23 Aligned_cols=80 Identities=8% Similarity=-0.090 Sum_probs=62.4
Q ss_pred CCceeehhHHHHHHHHHHhccC-------------CCCCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEE
Q 040957 160 KFGKVFGGQLVGQALAAASKTV-------------DCLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQ 226 (430)
Q Consensus 160 ~~~~~~GG~~~a~al~Aa~~~~-------------~~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q 226 (430)
..+.+|+|..+..+-.|+.... +-...+.++++.|++|...+..+.+++...+-|++...+..+++.
T Consensus 19 ~~ghv~~~~y~~~~e~a~~~~~~~~g~~~~~~~~~~~~~v~~~~~i~y~~~~~~gd~v~v~~~v~~~~~~s~~~~~~i~~ 98 (157)
T 2hlj_A 19 YNGHLRDAFYLLIFSYATDALMDRIGLDADSRGQSGNSLFTLEAHINYLHEVKLGTEVWVQTQILGFDRKRLHVYHSLHR 98 (157)
T ss_dssp TTSBBCHHHHHHHHHHHHHHHHHHHTTTTTSTTTTTTTEEEEEEEEEECSCCBTTCEEEEEEEEEEECSSEEEEEEEEEE
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHcCCCHHHHHhcCCceEEEEEEEEEecccCCCCEEEEEEEEEEeCCcEEEEEEEEEE
Confidence 3458999988877766554321 113457789999999999988999999999999999999999987
Q ss_pred C--CeeEEEEEEecc
Q 040957 227 K--GNIIFTLLASFQ 239 (430)
Q Consensus 227 ~--g~~~~~~~~sf~ 239 (430)
. |++++.+...+-
T Consensus 99 ~~~g~~~a~~~~~~v 113 (157)
T 2hlj_A 99 AGFDEVLAASEQMLL 113 (157)
T ss_dssp TTEEEEEEEEEEEEE
T ss_pred CCCCcEEEEEEEEEE
Confidence 4 788888776654
No 173
>2ess_A Acyl-ACP thioesterase; NP_810988.1, structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Bacteroides thetaiotaomicron} SCOP: d.38.1.8 d.38.1.8
Probab=93.20 E-value=3.4 Score=36.41 Aligned_cols=54 Identities=13% Similarity=-0.031 Sum_probs=47.7
Q ss_pred CcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEE-CCeeEEEEEEec
Q 040957 185 KIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQ-KGNIIFTLLASF 238 (430)
Q Consensus 185 ~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q-~g~~~~~~~~sf 238 (430)
..+..+++.|.++...+.++++++...+-|++..++.-++.. +|++++++....
T Consensus 60 ~vv~~~~i~y~~~~~~~d~l~V~t~v~~~~~~~~~~~~~i~~~~g~~~a~~~~~~ 114 (248)
T 2ess_A 60 WVLSRLAIELDEMPYQYEKFSVQTWVENVYRLFTDRNFAVIDKDGKKIGYARSVW 114 (248)
T ss_dssp EEEEEEEEEESCCCBTTCEEEEEEEEEEECSSEEEEEEEEECTTSCEEEEEEEEE
T ss_pred EEEEEeEEEEccCCCCCCEEEEEEEEeecCCcEEEEEEEEEcCCCCEEEEEEEEE
Confidence 467889999999999999999999999999999999999985 888888776544
No 174
>1u1z_A (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase; fatty acid biosynthesis, hot DOG fold, lyase; 2.50A {Pseudomonas aeruginosa} SCOP: d.38.1.6
Probab=93.09 E-value=0.49 Score=39.39 Aligned_cols=51 Identities=6% Similarity=-0.142 Sum_probs=44.4
Q ss_pred eeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEECCeeEEEEEEecccc
Q 040957 191 HCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKGNIIFTLLASFQKE 241 (430)
Q Consensus 191 ~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~g~~~~~~~~sf~~~ 241 (430)
.+.|.+|..++..++++++.++.-+.+....++++.+|++++.+...+...
T Consensus 114 ~vrF~~pV~pGD~L~~~v~v~~~~~g~~~~~~~~~v~g~~v~~a~~~~~~~ 164 (168)
T 1u1z_A 114 KLRFRQPVLPGDQLQLHAKFISVKRSIWKFDCHATVDDKPVCSAEIICAER 164 (168)
T ss_dssp EEEECSCCCTTCEEEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEEEE
T ss_pred EEEECCcCCCCCEEEEEEEEEEEeCCEEEEEEEEEECCEEEEEEEEEEEEe
Confidence 588999999988999999998877788888999999999999998877544
No 175
>2ali_A Hypothetical protein PA2801; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.75A {Pseudomonas aeruginosa} SCOP: d.38.1.1 PDB: 3qy3_A
Probab=92.91 E-value=0.45 Score=38.99 Aligned_cols=79 Identities=10% Similarity=-0.115 Sum_probs=62.4
Q ss_pred CceeehhHHHHHHHHHHhccC----------CCCCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEEC---
Q 040957 161 FGKVFGGQLVGQALAAASKTV----------DCLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQK--- 227 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~~----------~~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~--- 227 (430)
.+.+++|..+..+-.|+.... .....+.++++.|.+|...+..+++.+...+-|++..++..+++.+
T Consensus 44 ~Ghvnn~~yl~~~e~a~~~~~~~~g~~~~~~g~~~vv~~~~i~y~~p~~~gd~v~v~t~v~~~~~~s~~~~~~i~~~~~~ 123 (158)
T 2ali_A 44 YGHVNNTLYFQYLEEARVAWFETLGIDLEGAAEGPVVLQSLHTYLKPVVHPATVVVELYAGRLGTSSLVLEHRLHTLEDP 123 (158)
T ss_dssp TSSBCTTHHHHHHHHHHHHHHHHTTCCCSSCSEEEEEEEEEEEECSCCCSSCEEEEEEEEEEECSSEEEEEEEEEESSCT
T ss_pred CCeecHHHHHHHHHHHHHHHHHHhCcccccCCceEEEEEEEeEEeccccCCCEEEEEEEEEEecCcEEEEEEEEEECCCC
Confidence 468999998887766654311 1124577899999999999889999999999999999999999874
Q ss_pred CeeEEEEEEecc
Q 040957 228 GNIIFTLLASFQ 239 (430)
Q Consensus 228 g~~~~~~~~sf~ 239 (430)
|++++.+...+-
T Consensus 124 g~~~a~a~~~~v 135 (158)
T 2ali_A 124 QGTYGEGHCKLV 135 (158)
T ss_dssp TSCCEEEEEEEE
T ss_pred CEEEEEEEEEEE
Confidence 778888776653
No 176
>2pzh_A Hypothetical protein HP_0496; lipid, acyl-COA, bacterial membrane, TOL-PAL system, thioest hot-DOG fold, hydrolase; 1.70A {Helicobacter pylori}
Probab=92.82 E-value=0.32 Score=38.37 Aligned_cols=79 Identities=13% Similarity=0.077 Sum_probs=61.3
Q ss_pred CceeehhHHHHHHHHHHhcc---CC-------CCCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEEC---
Q 040957 161 FGKVFGGQLVGQALAAASKT---VD-------CLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQK--- 227 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~---~~-------~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~--- 227 (430)
.+.+|+|..+..+-.|+... .+ ....+.++++.|.+|...+..+.+.+...+-|++..++..+++.+
T Consensus 15 ~g~v~~~~y~~~~~~a~~~~~~~~g~~~~~~~~~~vv~~~~i~y~~~~~~gd~v~v~~~v~~~~~~s~~~~~~i~~~~~~ 94 (135)
T 2pzh_A 15 EGVVYHANYLKYCERARSEFFFKQNVLPENEEGVFVIRSIKADFFTPASLGQVLEIRTQIKELRKVFVVLFQEIYCIQNA 94 (135)
T ss_dssp TSBBCTTHHHHHHHHHHHHHHHTTTCCSEETTEEEEEEEEEEEECSCCBTTCEEEEEEEEEEECSSEEEEEEEEEEEECT
T ss_pred CceecHHHHHHHHHHHHHHHHHHcCCChHHcCceEEEEEEEEEEccccccCCEEEEEEEEEEecceEEEEEEEEEeCCCc
Confidence 56899999888777665322 21 124567899999999999899999999999999999999998764
Q ss_pred ------CeeEEEEEEecc
Q 040957 228 ------GNIIFTLLASFQ 239 (430)
Q Consensus 228 ------g~~~~~~~~sf~ 239 (430)
|++++.+...+-
T Consensus 95 ~~~~~~g~~~a~~~~~~v 112 (135)
T 2pzh_A 95 SLEPMKPFKVFASEIKFG 112 (135)
T ss_dssp TCCCCCCEEEEEEEEEEE
T ss_pred cccccCceEEEEEEEEEE
Confidence 458887776654
No 177
>2w3x_A CALE7; hydrolase, hotdog fold, thioesterase, enediyne biosynthesis; HET: JEF; 1.75A {Micromonospora echinospora}
Probab=92.81 E-value=0.46 Score=38.07 Aligned_cols=79 Identities=8% Similarity=-0.026 Sum_probs=61.8
Q ss_pred CceeehhHHHHHHHHHHhccC---C--------C--CCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEE-
Q 040957 161 FGKVFGGQLVGQALAAASKTV---D--------C--LKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQ- 226 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~~---~--------~--~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q- 226 (430)
.+.+|++..+..+-.|+.... + . ...+.++++.|++|...+..+++++...+-|++..++..+++.
T Consensus 21 ~g~v~~~~y~~~~e~a~~~~~~~~g~~~~~~~~~~~~~vv~~~~i~y~~~~~~gd~v~v~t~v~~~~~~s~~~~~~i~~~ 100 (147)
T 2w3x_A 21 VGNVYYVNYLRWQGRCREMFLYEHAPEILDELRADLKLFTLKAECEFFAELAPFDRLAVRMRLVELTQTQMELGFDYLRL 100 (147)
T ss_dssp TSSBCTHHHHHHHHHHHHHHHHHHCTHHHHHHTTTEEEEEEEEEEEECSCCCTTCEEEEEEEEEEECSSEEEEEEEEEEE
T ss_pred CceEchHHHHHHHHHHHHHHHHHhCCCHHHHhhCCeEEEEEEEEEEEcCCCCCCCEEEEEEEEEEecCcEEEEEEEEEEc
Confidence 458888888877766643211 1 1 2357789999999999988999999999999999999999987
Q ss_pred --CCeeEEEEEEecc
Q 040957 227 --KGNIIFTLLASFQ 239 (430)
Q Consensus 227 --~g~~~~~~~~sf~ 239 (430)
+|++++++...+-
T Consensus 101 ~~~g~~~a~~~~~~v 115 (147)
T 2w3x_A 101 GGDDLLVARGRQRIA 115 (147)
T ss_dssp SSSEEEEEEEEEEEE
T ss_pred CCCCEEEEEEEEEEE
Confidence 5788888776654
No 178
>1z6b_A Pffabz, fatty acid synthesis protein; malaria, beta-hydroxyacyl-ACP dehydra fatty acid biosynthesis, SAD phasing, lyase; 2.09A {Plasmodium falciparum} SCOP: d.38.1.6 PDB: 3az8_A* 3az9_A* 3aza_A* 3azb_A* 1zhg_A 2oki_A 2okh_A
Probab=92.78 E-value=0.99 Score=36.78 Aligned_cols=49 Identities=8% Similarity=-0.027 Sum_probs=38.5
Q ss_pred eeeeccCcCCCCCeEEEEEEeeeCC--CeeEEEEEEEECCeeEEE-EEEecc
Q 040957 191 HCYFLLVGDLNIPIIYQVHRVRDGN--SFATRRVDAIQKGNIIFT-LLASFQ 239 (430)
Q Consensus 191 ~~~Fl~~~~~~~pi~~~V~~lr~Gr--~~s~~~V~~~Q~g~~~~~-~~~sf~ 239 (430)
.+.|.+|..++..++++++.++... ......+++.|+|+++++ +.+.+.
T Consensus 100 ~~rF~~pV~pGd~l~~~~~v~~~~~~~g~~~~~~~~~~~g~~v~~v~~~~~~ 151 (154)
T 1z6b_A 100 GVRWKKPVLPGDTLTMQANLISFKSSLGIAKLSGVGYVNGKVVINISEMTFA 151 (154)
T ss_dssp EEEECSCCCTTCEEEEEEEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred eeEEccccCCCCEEEEEEEEEEeeCCceEEEEEEEEEECCEEEEEeeEEEEE
Confidence 5889999999888888877765433 447788888999999998 877653
No 179
>1q6w_A Monoamine oxidase regulatory protein, putative; structural genomics, nysgxrc T805, hot DOG fold; 2.81A {Archaeoglobus fulgidus} SCOP: d.38.1.4
Probab=92.70 E-value=0.35 Score=39.82 Aligned_cols=58 Identities=19% Similarity=0.084 Sum_probs=46.5
Q ss_pred ecceeeeccCCCCCCCeEEeEEeecceeC-----CeeeEEEEEEccCCCEEEEEeccceeccC
Q 040957 363 SLDHSMWFHRSFRADDWLLFVIVSPVASK-----ARGFVSGEMFNTKGELLVSLTQEALLRSP 420 (430)
Q Consensus 363 sld~si~f~~~~~~~~W~l~~~~~~~~~~-----gr~~~~~~i~~~~G~lvA~~~Q~~l~r~~ 420 (430)
.....+.|++|+.+++-+..+.+...... +....+.++.|++|++|+++.-..+++.+
T Consensus 96 ~~~~~~rF~~PV~~Gd~l~~~~~v~~~~~~~~~~~~v~~~~~~~n~~g~~v~~~~~~~~~~~~ 158 (161)
T 1q6w_A 96 FGIKDVRFLRPVFIGDTIAASAEVVEKQDFDEKSGVVTYKLEVKNQRGELVLTALYSALIRKT 158 (161)
T ss_dssp EEEEEEEECSCCBTTCEEEEEEEEEEEEEEETTEEEEEEEEEEECTTSCEEEEEEEEEEEECC
T ss_pred ceeEEEEEecCCCCCCEEEEEEEEEEEEecCCCceEEEEEEEEEeCCCCEEEEEEEEEEEecC
Confidence 45556999999999999988887765542 56667888899999999999988887754
No 180
>3k67_A Putative dehydratase AF1124; hypothetical protein AF1124, structural genomics, PSI, protein structure initiative; 1.25A {Archaeoglobus fulgidus} PDB: 2b3m_A
Probab=92.70 E-value=1.1 Score=36.75 Aligned_cols=77 Identities=8% Similarity=-0.092 Sum_probs=53.4
Q ss_pred CCceeehhHHHHHHHHHHhccCCCCCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEECCeeEEEEEEe
Q 040957 160 KFGKVFGGQLVGQALAAASKTVDCLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKGNIIFTLLAS 237 (430)
Q Consensus 160 ~~~~~~GG~~~a~al~Aa~~~~~~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~g~~~~~~~~s 237 (430)
++.-++|-.++|++...... .+..-...+..+.|.+|..++..+.++++...--++-.+..+++..++++++.+.+.
T Consensus 79 ~~~IahG~l~~sl~~~~~~~-~~g~~~~~~~~~rF~~PV~~GDtl~~~~~V~~~~~~~~~~~~~~~~~d~vV~~G~a~ 155 (159)
T 3k67_A 79 GGRVVHGMLTTSLVSAAVAR-LPGTVVLLEQSFRYTSPVRIGDVVRVEGVVSGVEKNRYTIDVKCYTGDKVVAEGVVK 155 (159)
T ss_dssp SSCCCCHHHHHHHHHHHHHT-SSSCEEEEEEEEEECSCCCTTCEEEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEE
T ss_pred CCceecHHHHHHHHHHHHhh-cCCceeeeeeeeEEcCCcCCCCEEEEEEEEEEEECCEEEEEEEEEECCEEEEEEEEE
Confidence 34468888888876555443 332233456788999999998878777665444445567788888889988776653
No 181
>3d6l_A Putative hydrolase; hot DOG fold, thioesterase, acyl-COA; 2.59A {Campylobacter jejuni}
Probab=92.58 E-value=0.33 Score=38.58 Aligned_cols=59 Identities=8% Similarity=-0.051 Sum_probs=51.3
Q ss_pred eeecce-eeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccC--------CCEEEEEeccceecc
Q 040957 361 SLSLDH-SMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTK--------GELLVSLTQEALLRS 419 (430)
Q Consensus 361 ~~sld~-si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~--------G~lvA~~~Q~~l~r~ 419 (430)
.++++. ++.|++|+..++++..+++....++.....++++++++ |+++|++.-..+...
T Consensus 49 ~vt~~~~~i~f~~pv~~gd~l~v~~~v~~~g~~s~~~~~~i~~~~~~~~~~g~~~~~a~a~~t~v~~d 116 (137)
T 3d6l_A 49 VVTISMDKVVFKEPVFIGDIISCYSKVVNVGNTSISVEVEVTAQRVDSQGCTSCINVTSALVTYVSVT 116 (137)
T ss_dssp EEEEEEEEEECCSCCCTTCEEEEEEEEEEECSSEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEEC
T ss_pred EEEEEECcEEEeCCccCCCEEEEEEEEEEeCCcEEEEEEEEEEccCcccccCceEEEEEEEEEEEEEC
Confidence 678888 49999999999999999999999999999999999974 789998887766543
No 182
>2xem_A DYNE7, TEBC; biosynthetic protein, polyketide biosynthesis, enediyne anti agent, thioesterase; HET: SSV; 2.10A {Micromonospora chersina} PDB: 2xfl_A
Probab=92.56 E-value=0.79 Score=36.99 Aligned_cols=79 Identities=9% Similarity=-0.010 Sum_probs=61.5
Q ss_pred CceeehhHHHHHHHHHHhcc-------------CCCCCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEE-
Q 040957 161 FGKVFGGQLVGQALAAASKT-------------VDCLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQ- 226 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~-------------~~~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q- 226 (430)
.+.+|+|..+..+-.|+... -+-...+.++++.|.+|...+..+++++...+-|++...+..+++.
T Consensus 25 ~Ghv~~~~yl~~~e~ar~~~~~~~g~~~~~~~~~g~~~vv~~~~i~y~~~~~~gd~v~v~t~v~~~~~~s~~~~~~i~~~ 104 (150)
T 2xem_A 25 VGNVYFAHYLHWQGHCREHFLADHAPGVMAALADGLALVTVDCHADFYAEGSAFDEVEVRMMLDRLDGHRIAMSFDYVRV 104 (150)
T ss_dssp TSSBCTTHHHHHHHHHHHHHHHHHCHHHHHHTTTTEEEEEEEEEEEECSCCCTTCEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CceechHHHHHHHHHHHHHHHHHhCCCHHHHhhCCcEEEEEEEEEEECCCCCCCCEEEEEEEEEeeCCcEEEEEEEEEec
Confidence 45788888777765553211 1113457889999999999999999999999999999999999986
Q ss_pred ---CCeeEEEEEEecc
Q 040957 227 ---KGNIIFTLLASFQ 239 (430)
Q Consensus 227 ---~g~~~~~~~~sf~ 239 (430)
+|++++++...+-
T Consensus 105 ~~~~g~~~a~~~~~~v 120 (150)
T 2xem_A 105 APGPPTLLAQGRQTVA 120 (150)
T ss_dssp ESSSCEEEEEEEEEEE
T ss_pred CCCCCeEEEEEEEEEE
Confidence 6888888876654
No 183
>3bnv_A CJ0977; virulence factor, hot-DOG fold, flagel unknown function; HET: MSE; 2.60A {Campylobacter jejuni}
Probab=92.48 E-value=0.49 Score=38.64 Aligned_cols=59 Identities=12% Similarity=0.031 Sum_probs=50.8
Q ss_pred eeecceeeeccCCCCCCCeEEeEEeeccee-CCeeeEEEEEEccCCCEEEEEeccceeccC
Q 040957 361 SLSLDHSMWFHRSFRADDWLLFVIVSPVAS-KARGFVSGEMFNTKGELLVSLTQEALLRSP 420 (430)
Q Consensus 361 ~~sld~si~f~~~~~~~~W~l~~~~~~~~~-~gr~~~~~~i~~~~G~lvA~~~Q~~l~r~~ 420 (430)
..+++.++.|.+|+.+++.+..+.+....+ ++....+++++ .+|++|+++.-..++..+
T Consensus 87 ~vt~~~~i~F~~PV~~GD~L~a~a~v~~~~~~~~~~v~~~~~-~~g~~v~~g~~~~~v~~~ 146 (152)
T 3bnv_A 87 SVIIGSKCFFYAPLKLGDVLELEAHALFDETSKKRDVKVVGH-VKEIKMFEGTIQVVSTDE 146 (152)
T ss_dssp EEEEEEEEEECSCCBTTCEEEEEEEECCCSSCSEEEEEEEEE-ETTEEEEEEEEEEEECSS
T ss_pred EEEEEEEEEEeCCCCCCCEEEEEEEEEEEcCCcEEEEEEEEE-ECCEEEEEEEEEEEEccc
Confidence 567777899999999999999999999988 88899999998 689999998887776643
No 184
>2egj_A Hypothetical protein AQ_1494; structural genomics; 1.80A {Aquifex aeolicus} PDB: 2egi_A 2egr_A
Probab=92.00 E-value=0.52 Score=36.54 Aligned_cols=57 Identities=11% Similarity=0.001 Sum_probs=50.6
Q ss_pred eeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEeccceec
Q 040957 361 SLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEALLR 418 (430)
Q Consensus 361 ~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~Q~~l~r 418 (430)
....++.+.|++|+..++.+..+++....++.......++++ +|+++|++....+..
T Consensus 54 ~v~~~~~i~y~~~~~~gd~v~v~~~v~~~~~~~~~~~~~i~~-~g~~~a~~~~~~v~~ 110 (128)
T 2egj_A 54 VVLLNAYCEYKKPLFYDDVFEVHLNLEELSRFTFTFSYIVFK-EDIAVAKANTKHCMV 110 (128)
T ss_dssp EEEEEEEEEECSCCCTTCEEEEEEEEEEECSSEEEEEEEEEE-TTEEEEEEEEEEEEE
T ss_pred eEEEEEEEEEcCCCcCCCEEEEEEEEEEeCCcEEEEEEEEEE-CCEEEEEEEEEEEEE
Confidence 467788999999999999999999999998889999999999 999999988876654
No 185
>3ck1_A Putative thioesterase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.74A {Ralstonia eutropha}
Probab=91.78 E-value=0.5 Score=38.02 Aligned_cols=59 Identities=14% Similarity=0.021 Sum_probs=52.2
Q ss_pred eeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEeccceecc
Q 040957 361 SLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEALLRS 419 (430)
Q Consensus 361 ~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~Q~~l~r~ 419 (430)
.+..+..|.|++|+..++++.++++....++-......++++.+|+++|++...-+...
T Consensus 59 ~vv~~~~i~y~~~~~~gd~v~v~~~v~~~~~~s~~~~~~i~~~~g~~~a~~~~~~v~vd 117 (150)
T 3ck1_A 59 VPTADLHCRFVAPSRLGETLTRELRVVKLGQSSFTVQVRFMGPDSGLRLEVTQRLVCVD 117 (150)
T ss_dssp CCEEEEEEEECSCCBTTCEEEEEEEEEEECSSEEEEEEEEECTTSCEEEEEEEEEECEE
T ss_pred eEEEEEEEEEeCCCcCCCEEEEEEEEEEEcCcEEEEEEEEEeCCCEEEEEEEEEEEEEe
Confidence 45778899999999999999999999999988999999999988999999988776643
No 186
>2fuj_A Conserved hypothetical protein; structural genomics, conserved hypot protein, hot DOG domain, acyl-COA thioesterase, hydrolase; 1.70A {Xanthomonas campestris PV} SCOP: d.38.1.1
Probab=91.65 E-value=3 Score=32.56 Aligned_cols=60 Identities=8% Similarity=0.076 Sum_probs=51.5
Q ss_pred eeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEc-cC-CCEEEEEeccceecc
Q 040957 360 ASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFN-TK-GELLVSLTQEALLRS 419 (430)
Q Consensus 360 ~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~-~~-G~lvA~~~Q~~l~r~ 419 (430)
..+...+.+.|++|+..++++..+++....++-......++++ ++ |+++|++....+...
T Consensus 58 ~~v~~~~~i~y~~~~~~gd~v~v~~~v~~~~~~s~~~~~~i~~~~~~g~~~a~~~~~~v~vd 119 (137)
T 2fuj_A 58 APVVAATNVNYKRPLVWPNDILVELFVERLGSSSVTIGHRILDQKDEGVLYSDGNVVVVWID 119 (137)
T ss_dssp EEEEEEEEEEECSCCCTTCCEEEEEEEEEECSSEEEEEEEEEESSCTTCEEEEEEEEEEEES
T ss_pred eEEEEEEEeEEeCCccCCCEEEEEEEEEEecCcEEEEEEEEEeCCCCCeEEEEEEEEEEEEE
Confidence 3567788999999999999999999998888888899999997 57 999999988776654
No 187
>4ffu_A Oxidase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgrc, PS biology; HET: MSE; 1.80A {Sinorhizobium meliloti}
Probab=91.48 E-value=0.78 Score=38.46 Aligned_cols=80 Identities=11% Similarity=0.109 Sum_probs=55.6
Q ss_pred CceeehhHHHHHHHHHHhccCCCCCc-ceeeeeeeccCcCCCCCeEEEEEEe--eeC-----CCeeEEEEEEE-ECCeeE
Q 040957 161 FGKVFGGQLVGQALAAASKTVDCLKI-VHSLHCYFLLVGDLNIPIIYQVHRV--RDG-----NSFATRRVDAI-QKGNII 231 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~~~~~~~-~~s~~~~Fl~~~~~~~pi~~~V~~l--r~G-----r~~s~~~V~~~-Q~g~~~ 231 (430)
+..++|-++++++...+...++.... .....+.|.+|..++..+.++++.+ +.. +.+-+..+++. |+|+++
T Consensus 79 ~~IahG~~t~~l~~~l~~~~~~~~~~~~g~~~~rF~~PV~~GDtL~~~~~v~~~~~~~s~~~~g~v~~~~~~~nq~Ge~V 158 (176)
T 4ffu_A 79 QRIAHGTMIFSIGVGLTASLINPVAFSYGYDRLRFVRPVHIGDTIRTRVTIAAKEDDPKRPGAGRVVERCEVINQRGEVV 158 (176)
T ss_dssp SCCCCHHHHHHHHHHHTCCCBCTTEEEEEEEEEEECSCCCTTCEEEEEEEEEEEEECTTCTTEEEEEEEEEEECTTSCEE
T ss_pred CcccChHHHHHHHHHHHHhhcCCCeEEEEEeeEEEcCCccCCCEEEEEEEEEEEEecccCCCceEEEEEEEEEeCCCCEE
Confidence 44789999999887776655543211 1223788999999988887777654 443 23556667775 899999
Q ss_pred EEEEEeccc
Q 040957 232 FTLLASFQK 240 (430)
Q Consensus 232 ~~~~~sf~~ 240 (430)
+++.+.+..
T Consensus 159 ~~g~~~v~v 167 (176)
T 4ffu_A 159 LAADHILIV 167 (176)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEE
Confidence 888877644
No 188
>2cye_A TTHA1846, putative thioesterase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: COA; 1.90A {Thermus thermophilus} SCOP: d.38.1.1
Probab=91.41 E-value=0.62 Score=36.51 Aligned_cols=59 Identities=7% Similarity=-0.086 Sum_probs=51.2
Q ss_pred eeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEeccceecc
Q 040957 360 ASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEALLRS 419 (430)
Q Consensus 360 ~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~Q~~l~r~ 419 (430)
..++.+.++.|++|+..++++..+++....++-......++++. |+++|++....+...
T Consensus 52 ~~v~~~~~i~y~~~~~~gd~l~v~~~v~~~~~~s~~~~~~i~~~-g~~~a~~~~~~v~~d 110 (133)
T 2cye_A 52 HFVVARMEVDYLRPILLGDEVFVGVRTVGLGRSSLRMEHLVTAN-GESAAKGLGVLVWLE 110 (133)
T ss_dssp GEEEEEEEEEECSCCBTTCEEEEEEEEEEECSSEEEEEEEEEET-TEEEEEEEEEEEEEE
T ss_pred eEEEEEEEEEEeccccCCCEEEEEEEEEEeCCcEEEEEEEEEEC-CEEEEEEEEEEEEEe
Confidence 35677889999999999999999999988888889999999986 999999988776643
No 189
>2hlj_A Hypothetical protein; putative thioesterase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.00A {Pseudomonas putida} SCOP: d.38.1.1
Probab=91.39 E-value=1.6 Score=35.28 Aligned_cols=60 Identities=12% Similarity=0.050 Sum_probs=52.7
Q ss_pred eeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEcc-CCCEEEEEeccceecc
Q 040957 360 ASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNT-KGELLVSLTQEALLRS 419 (430)
Q Consensus 360 ~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~-~G~lvA~~~Q~~l~r~ 419 (430)
.....++.|.|++++..++.+.++++....++-......++++. +|+++|++....+...
T Consensus 56 ~~v~~~~~i~y~~~~~~gd~v~v~~~v~~~~~~s~~~~~~i~~~~~g~~~a~~~~~~v~vd 116 (157)
T 2hlj_A 56 SLFTLEAHINYLHEVKLGTEVWVQTQILGFDRKRLHVYHSLHRAGFDEVLAASEQMLLHVD 116 (157)
T ss_dssp TEEEEEEEEEECSCCBTTCEEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEEEEEEBC
T ss_pred ceEEEEEEEEEecccCCCCEEEEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEEE
Confidence 34567889999999999999999999988888889999999998 8999999998887754
No 190
>2q2b_A Cytosolic acyl coenzyme A thioester hydrolase; ACOT7, C-terminal domain; 2.50A {Mus musculus}
Probab=91.09 E-value=1.1 Score=37.57 Aligned_cols=84 Identities=13% Similarity=-0.040 Sum_probs=58.3
Q ss_pred HHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccC------
Q 040957 331 LHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTK------ 404 (430)
Q Consensus 331 ~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~------ 404 (430)
+|...++-+.|......+.... +.....+++| ++.|.+|+..++++..+++....++......+++|+++
T Consensus 44 v~gG~~~~~~D~a~~~~~~~~~---~~~~vt~~~~-~i~f~~pv~~Gd~l~v~a~v~~~G~ss~~~~~~v~~~~~~~~~g 119 (179)
T 2q2b_A 44 VHGGVTMKLMDEVAGIVAARHC---KTNIVTASVD-AINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDNSQ 119 (179)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHH---CSCCEEEEEE-EEEECSCCBTTEEEEEEEEEEEEETTEEEEEEEEEEEESCC---
T ss_pred EeHHHHHHHHHHHHHHHHHHHc---CCCeEEEEEe-eEEEccCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEcccccCCC
Confidence 3444455566654322222111 1223455666 79999999999999999999999999999999999863
Q ss_pred -CCEEEEEeccceec
Q 040957 405 -GELLVSLTQEALLR 418 (430)
Q Consensus 405 -G~lvA~~~Q~~l~r 418 (430)
++++|++.-.-+..
T Consensus 120 ~~~l~a~a~~t~V~v 134 (179)
T 2q2b_A 120 KRYRAASAFFTYVSL 134 (179)
T ss_dssp CCEEEEEEEEEEECB
T ss_pred ceEEEEEEEEEEEEE
Confidence 47888887766554
No 191
>2oiw_A Putative 4-hydroxybenzoyl-COA thioesterase; structural genomics, protein structure initiative, midwest center for structu genomics; 2.00A {Geobacillus stearothermophilus} SCOP: d.38.1.1
Probab=90.66 E-value=0.79 Score=36.09 Aligned_cols=59 Identities=3% Similarity=-0.113 Sum_probs=52.0
Q ss_pred eeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEeccceecc
Q 040957 360 ASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEALLRS 419 (430)
Q Consensus 360 ~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~Q~~l~r~ 419 (430)
.....++.|.|++|+..++++..+++....++.......++++ +|+++|++....+...
T Consensus 52 ~~v~~~~~i~y~~~~~~gd~v~v~~~v~~~~~~s~~~~~~i~~-~g~~~a~~~~~~v~vd 110 (136)
T 2oiw_A 52 RMVIIRMEVDYVNQMYYGQDVTVYTGIERIGNTSLTIYEEIHQ-NGVVCAKGRSVYVNFN 110 (136)
T ss_dssp CEEEEEEEEEECSCCCTTSCEEEEEEEEEECSSEEEEEEEEEE-TTEEEEEEEEEEEEEE
T ss_pred eEEEEEEEEEEcccCCCCCEEEEEEEEEecCCcEEEEEEEEEE-CCEEEEEEEEEEEEEE
Confidence 3567788999999999999999999999999999999999998 7999999988877654
No 192
>2qq2_A Cytosolic acyl coenzyme A thioester hydrolase; ACOT7, C-terminal domain, thioesterase, structural genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens}
Probab=90.55 E-value=1.2 Score=37.95 Aligned_cols=84 Identities=13% Similarity=-0.040 Sum_probs=58.4
Q ss_pred HHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccC------
Q 040957 331 LHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTK------ 404 (430)
Q Consensus 331 ~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~------ 404 (430)
+|...++-+.|......+.... +.....++++ +|.|.+|+..++++..+++....++-....+.++|+++
T Consensus 60 vhgG~~~~~~D~a~~~~a~~~~---~~~~vt~~~~-~i~f~~Pv~~Gd~l~v~a~v~~~Grss~~~~~~v~~~~~~~~~g 135 (193)
T 2qq2_A 60 VHGGVTMKLMDEVAGIVAARHC---KTNIVTASVD-AINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDSSQ 135 (193)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHH---SSEEEEEEEE-EEEECSCCBTTEEEEEEEEEEEECSSEEEEEEEEEEEECC--CC
T ss_pred ChHHHHHHHHHHHHHHHHHHHc---CCCeEEEEEe-EEEEccCCCCCCEEEEEEEEEecCCCEEEEEEEEEeccccCCCC
Confidence 3455555566754322222111 2223456666 69999999999999999999999999999999999864
Q ss_pred -CCEEEEEeccceec
Q 040957 405 -GELLVSLTQEALLR 418 (430)
Q Consensus 405 -G~lvA~~~Q~~l~r 418 (430)
++++|++.-.-+..
T Consensus 136 ~~~l~a~a~~t~V~v 150 (193)
T 2qq2_A 136 KRYRAASAFFTYVSL 150 (193)
T ss_dssp CCEEEEEEEEEEEEE
T ss_pred ceEEEEEEEEEEEEE
Confidence 36888887766554
No 193
>3hm0_A Probable thioesterase; niaid, ssgcid, decode, UW, SBRI, infectious disease, rhizobiales, bacteremia, endocarditis, bacillary angiomatosis; 2.50A {Bartonella henselae}
Probab=90.43 E-value=1 Score=37.23 Aligned_cols=79 Identities=9% Similarity=0.039 Sum_probs=62.3
Q ss_pred CceeehhHHHHHHHHHHhcc---C--C----------C--CCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEE
Q 040957 161 FGKVFGGQLVGQALAAASKT---V--D----------C--LKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVD 223 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~---~--~----------~--~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~ 223 (430)
.+.+|.+..+..+-.|+... . + . ...+.++++.|.++...+..+++++...+-|++...+..+
T Consensus 51 ~GhVnn~~yl~~~e~ar~~~~~~~G~~~~~l~~~~~~~g~~~vv~~~~i~y~~p~~~gd~i~V~t~v~~~~~~s~~~~~~ 130 (167)
T 3hm0_A 51 SGVVYHARYLEFFERGRSEFLRDTGFNNTLLASGVEGEKLFFVVRHMEINFSRPAQIDNLLTIKTRISRLQGARFFMEQY 130 (167)
T ss_dssp TSSBCTTHHHHHHHHHHHHHHHTTSCCHHHHHHTTTSSCEEEEEEEEEEEECSCCCTTCEEEEEEEEEEECSSEEEEEEE
T ss_pred CCeecHHHHHHHHHHHHHHHHHHcCCCHHHHhhccccCCeEEEEEEEEEEEecCCCCCCEEEEEEEEEEeCCeEEEEEEE
Confidence 45788888777776664211 1 0 1 2457889999999999999999999999999999999999
Q ss_pred EEECCeeEEEEEEecc
Q 040957 224 AIQKGNIIFTLLASFQ 239 (430)
Q Consensus 224 ~~Q~g~~~~~~~~sf~ 239 (430)
++.+|++++.+...+-
T Consensus 131 i~~~g~~~a~a~~~~V 146 (167)
T 3hm0_A 131 ILHGESMLVTAKVEIA 146 (167)
T ss_dssp EEETTEEEEEEEEEEE
T ss_pred EEECCEEEEEEEEEEE
Confidence 9999999888876653
No 194
>3exz_A MAOC-like dehydratase; Q2RSA1_rhort, NESG, RRR103A, structur genomics, PSI-2, protein structure initiative; 2.30A {Rhodospirillum rubrum}
Probab=90.33 E-value=0.77 Score=37.49 Aligned_cols=60 Identities=13% Similarity=0.173 Sum_probs=46.0
Q ss_pred eecceeeeccCCCCCCCeEEeEEeeccee-----CCee--eEEEEEEccCCCEEEEEeccceeccCC
Q 040957 362 LSLDHSMWFHRSFRADDWLLFVIVSPVAS-----KARG--FVSGEMFNTKGELLVSLTQEALLRSPK 421 (430)
Q Consensus 362 ~sld~si~f~~~~~~~~W~l~~~~~~~~~-----~gr~--~~~~~i~~~~G~lvA~~~Q~~l~r~~~ 421 (430)
..++.++.|++|+.+++-+..+.+..... .|++ ..+..+.|++|++|+++.-..+++.+.
T Consensus 80 ~~~~~~~rF~~PV~~GD~L~~~~~v~~~~~~~s~~~~~~v~~~~~~~nq~Ge~V~~~~~~~~~~~r~ 146 (154)
T 3exz_A 80 IGAGTELSWPNPTRPGDELHVETTVLAITPSKSRPDRAIVTCQSDTLNQRGEVVQRSTAKVVVFRRP 146 (154)
T ss_dssp CEEEEEEECSSCCCTTCEEEEEEEEEEEEECSSCTTEEEEEEEEEEECTTSCEEEEEEEEEEEECCC
T ss_pred ecceeEEEEcCCCCCCCEEEEEEEEEEEEecccCCCceEEEEEEEEEeCCCCEEEEEEEEEEEEccc
Confidence 34556899999999999998888776554 2344 556777799999999999887777553
No 195
>1njk_A Hypothetical protein YBAW; structural genomics, thioesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.90A {Escherichia coli} SCOP: d.38.1.1
Probab=90.20 E-value=1 Score=36.59 Aligned_cols=59 Identities=10% Similarity=0.111 Sum_probs=51.8
Q ss_pred eeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEE-ccCCCEEEEEeccceecc
Q 040957 361 SLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMF-NTKGELLVSLTQEALLRS 419 (430)
Q Consensus 361 ~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~-~~~G~lvA~~~Q~~l~r~ 419 (430)
.+..+..|.|.+|+..++++.++++....++-......+|+ +++|+++|++....+...
T Consensus 73 ~v~~~~~i~y~~p~~~gd~l~v~~~v~~~g~~s~~~~~~i~~~~~g~~~a~~~~~~v~vd 132 (156)
T 1njk_A 73 FVVVNININYRRPAVLSDLLTITSQLQQLNGKSGILSQVITLEPEGQVVADALITFVCID 132 (156)
T ss_dssp EEEEEEEEEECSCCCTTCEEEEEEEEEEEETTEEEEEEEEEETTTTEEEEEEEEEEEEEE
T ss_pred EEEEEEEEEEeCCCCCCCEEEEEEEEEEeCCeEEEEEEEEEECCCCeEEEEEEEEEEEEE
Confidence 46778899999999999999999999999888899999999 579999999988876653
No 196
>1s5u_A Protein YBGC; structural genomics, hypothetical protein, thioesterase fold, PSI, protein structure initiative; 1.70A {Escherichia coli} SCOP: d.38.1.1
Probab=90.17 E-value=0.96 Score=35.57 Aligned_cols=59 Identities=12% Similarity=-0.003 Sum_probs=51.5
Q ss_pred eeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEE-EccCCCEEEEEeccceecc
Q 040957 360 ASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEM-FNTKGELLVSLTQEALLRS 419 (430)
Q Consensus 360 ~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i-~~~~G~lvA~~~Q~~l~r~ 419 (430)
..+..++.+.|++|+..++++..+++....++-......++ ++ +|+++|++....+...
T Consensus 58 ~~v~~~~~i~y~~~~~~gd~v~v~~~v~~~~~~s~~~~~~i~~~-~g~~~a~~~~~~v~vd 117 (138)
T 1s5u_A 58 AFVVRKMTVEYYAPARLDDMLEIQTEITSMRGTSLVFTQRIVNA-ENTLLNEAEVLVVCVD 117 (138)
T ss_dssp EEEEEEEEEEECSCCCTTCEEEEEEEEEEECSSEEEEEEEEECT-TCCEEEEEEEEEEEEE
T ss_pred EEEEEEEEEEECCcccCCCEEEEEEEEEEeCCeEEEEEEEEEec-CCEEEEEEEEEEEEEe
Confidence 35677899999999999999999999998888889999999 88 8999999988877654
No 197
>3qoo_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, hot-DOG superfamily; 1.25A {Thermanaerovibrio acidaminovorans}
Probab=89.97 E-value=3.2 Score=33.08 Aligned_cols=75 Identities=11% Similarity=-0.059 Sum_probs=56.4
Q ss_pred eeehhH-HHHHHHHHHhccC----CCCCc--ceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEECCeeEEEEE
Q 040957 163 KVFGGQ-LVGQALAAASKTV----DCLKI--VHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKGNIIFTLL 235 (430)
Q Consensus 163 ~~~GG~-~~a~al~Aa~~~~----~~~~~--~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~g~~~~~~~ 235 (430)
.+|+.. ++|++=.||...+ +++.. =.++++.|++|...+..+..+++.+.-+++.-+..|+++.++..+..+.
T Consensus 37 ~V~aTp~mvalmE~aa~~~~~~~L~~G~~tVG~~v~v~Hlapt~~G~~V~~~a~v~~v~gr~v~f~v~a~d~~~~I~~G~ 116 (138)
T 3qoo_A 37 EFMSTAAFLETMTQLAVEILDHKLPEGFVSVGVRSEVHNLAPAVLGDDVTFTVTVDRVEGNRVVLSMKADDPHGPVATGL 116 (138)
T ss_dssp TBCCHHHHHHHHHHHHHHHHGGGSCTTEEEEEEEEEEEECSCCBTTCEEEEEEEEEEEETTEEEEEEEEEETTEEEEEEE
T ss_pred CcchHHHHHHHHHHHHHHHHHhhCCCCCeEEEEEEEEEEcCCCCCCCEEEEEEEEEEEcCCEEEEEEEEEECCeEEEEEE
Confidence 355554 4555555544433 44432 3468999999999988999999999999999999999999988887776
Q ss_pred Ee
Q 040957 236 AS 237 (430)
Q Consensus 236 ~s 237 (430)
..
T Consensus 117 h~ 118 (138)
T 3qoo_A 117 QE 118 (138)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 198
>3r87_A Putative uncharacterized protein; unknown function; 1.05A {Photobacterium profundum}
Probab=89.81 E-value=0.63 Score=36.78 Aligned_cols=55 Identities=9% Similarity=-0.139 Sum_probs=48.2
Q ss_pred CCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEE--CCeeEEEEEEec
Q 040957 184 LKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQ--KGNIIFTLLASF 238 (430)
Q Consensus 184 ~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q--~g~~~~~~~~sf 238 (430)
...+.++++.|.+|...+..+.+++...+-|++..++..+++. +|++++++...+
T Consensus 56 ~~vv~~~~i~y~~p~~~gd~v~v~t~v~~~~~~s~~~~~~i~~~~~g~~~a~~~~~~ 112 (135)
T 3r87_A 56 GFAVYKANMIFQDGVEFAEICDIRTSFTLDGKYKTLWRQEVWRPGASRAAVIGDIEM 112 (135)
T ss_dssp EEEEEEEEEEECSCCCTTCEEEEEEEEEEETTTEEEEEEEEECTTCSSCSEEEEEEE
T ss_pred EEEEEEEEEEECCcccCCCEEEEEEEEEEeCCEEEEEEEEEEECCCCEEEEEEEEEE
Confidence 3567889999999999999999999999999999999999988 788888876655
No 199
>2gf6_A Conserved hypothetical protein; putative thioesterase, structural genomics, joint center for structural genomics, JCSG; HET: COA; 1.91A {Sulfolobus solfataricus} SCOP: d.38.1.1
Probab=89.49 E-value=2.7 Score=32.72 Aligned_cols=59 Identities=14% Similarity=0.092 Sum_probs=50.4
Q ss_pred eeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEeccceecc
Q 040957 360 ASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEALLRS 419 (430)
Q Consensus 360 ~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~Q~~l~r~ 419 (430)
..+..++.+.|++|+..++++..++.....++-......+++ .+|+++|++....+...
T Consensus 57 ~~vv~~~~i~y~~~~~~gd~v~v~~~v~~~~~~s~~~~~~i~-~~g~~~a~~~~~~v~vd 115 (135)
T 2gf6_A 57 WFVIAESHAIYHRPVKLGDKLTVLLNPKILSNKTIKFEFKVL-KDGELTTEGYVIQIAIN 115 (135)
T ss_dssp EEEEEEEEEEECSCCCTTCEEEEEEEEEECSSSEEEEEEEEE-ETTEEEEEEEEEEEEEE
T ss_pred cEEEEEEEEEECCCCcCCCEEEEEEEEEEeCCcEEEEEEEEE-ECCEEEEEEEEEEEEEe
Confidence 356678899999999999999999999888888888899998 68999999988776643
No 200
>2nuj_A Thioesterase superfamily; YP_509914.1, structural genomics, protein structure initiative, joint center for structural G JCSG, hydrolase; 2.00A {Jannaschia} SCOP: d.38.1.1
Probab=89.47 E-value=1.4 Score=36.13 Aligned_cols=59 Identities=2% Similarity=-0.166 Sum_probs=51.6
Q ss_pred eeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEec--cceec
Q 040957 360 ASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQ--EALLR 418 (430)
Q Consensus 360 ~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~Q--~~l~r 418 (430)
......+.|.|++++..++.+.++++....++-......+|++++|+++|++.. ..+..
T Consensus 75 ~~v~~~~~i~y~~~~~~gd~i~v~t~v~~~~~~s~~~~~~i~~~~g~~~a~~~~~~~~v~v 135 (163)
T 2nuj_A 75 RLVLKQVHCTYLAEMGMGEDYVITGRVSNFRTTSFTMEFACWRLGDAVECTSEGSAVVVLL 135 (163)
T ss_dssp EEEEEEEEEEECSCCCTTCEEEEEEEEEEECSSEEEEEEEEEECSSSCEEEEEEEEEEEEE
T ss_pred eEEEEEEEEEEecCccCCCEEEEEEEEEEeCCcEEEEEEEEEeCCCEEEEEEEEeeEEEEE
Confidence 345677899999999999999999999988888999999999989999999988 66554
No 201
>2w3x_A CALE7; hydrolase, hotdog fold, thioesterase, enediyne biosynthesis; HET: JEF; 1.75A {Micromonospora echinospora}
Probab=89.28 E-value=1 Score=35.92 Aligned_cols=61 Identities=10% Similarity=-0.029 Sum_probs=52.6
Q ss_pred eeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEc--cCCCEEEEEeccceeccC
Q 040957 360 ASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFN--TKGELLVSLTQEALLRSP 420 (430)
Q Consensus 360 ~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~--~~G~lvA~~~Q~~l~r~~ 420 (430)
..+..++.|.|++|+..++++.++++....++-+.....+|++ .+|+++|++....+....
T Consensus 57 ~~vv~~~~i~y~~~~~~gd~v~v~t~v~~~~~~s~~~~~~i~~~~~~g~~~a~~~~~~v~vd~ 119 (147)
T 2w3x_A 57 KLFTLKAECEFFAELAPFDRLAVRMRLVELTQTQMELGFDYLRLGGDDLLVARGRQRIACMRG 119 (147)
T ss_dssp EEEEEEEEEEECSCCCTTCEEEEEEEEEEECSSEEEEEEEEEEESSSEEEEEEEEEEEEEEES
T ss_pred EEEEEEEEEEEcCCCCCCCEEEEEEEEEEecCcEEEEEEEEEEcCCCCEEEEEEEEEEEEEEC
Confidence 3456788999999999999999999999888888999999999 689999999888776543
No 202
>3r87_A Putative uncharacterized protein; unknown function; 1.05A {Photobacterium profundum}
Probab=89.25 E-value=0.93 Score=35.72 Aligned_cols=60 Identities=10% Similarity=0.005 Sum_probs=52.5
Q ss_pred eeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEcc-CCCEEEEEeccceeccC
Q 040957 361 SLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNT-KGELLVSLTQEALLRSP 420 (430)
Q Consensus 361 ~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~-~G~lvA~~~Q~~l~r~~ 420 (430)
.+...+.+.|++|+..++.+.++++....++.+.....+|+++ +|+++|++....+....
T Consensus 57 ~vv~~~~i~y~~p~~~gd~v~v~t~v~~~~~~s~~~~~~i~~~~~g~~~a~~~~~~v~vd~ 117 (135)
T 3r87_A 57 FAVYKANMIFQDGVEFAEICDIRTSFTLDGKYKTLWRQEVWRPGASRAAVIGDIEMVCLDK 117 (135)
T ss_dssp EEEEEEEEEECSCCCTTCEEEEEEEEEEETTTEEEEEEEEECTTCSSCSEEEEEEEEEECT
T ss_pred EEEEEEEEEECCcccCCCEEEEEEEEEEeCCEEEEEEEEEEECCCCEEEEEEEEEEEEECC
Confidence 4567889999999999999999999999999899999999997 89999999887766543
No 203
>3bjk_A Acyl-COA thioester hydrolase HI0827; hotdog fold, trimer of dimers, YCIA, structural GENO structure 2 function project, S2F; HET: CIT; 1.90A {Haemophilus influenzae rd KW20} PDB: 1yli_A*
Probab=89.15 E-value=2 Score=34.57 Aligned_cols=55 Identities=13% Similarity=0.014 Sum_probs=47.1
Q ss_pred cceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccC------C--CEEEEEeccceec
Q 040957 364 LDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTK------G--ELLVSLTQEALLR 418 (430)
Q Consensus 364 ld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~------G--~lvA~~~Q~~l~r 418 (430)
...++.|++|+..++.+..+++....++.......++++.+ | +++|++.-..+..
T Consensus 62 ~~~~i~f~~pv~~gd~l~v~~~v~~~g~~s~~~~~~i~~~~~~~~~~g~~~l~a~a~~~~v~v 124 (153)
T 3bjk_A 62 AVESMNFIKPISVGDVVCCYGQCLKVGRSSIKIKVEVWVKKVASEPIGERYCVTDAVFTFVAV 124 (153)
T ss_dssp EEEEEEECSCCCTTCEEEEEEEEEEECSSEEEEEEEEEEECSSSSSTTCEEEEEEEEEEEEEB
T ss_pred EEeeEEEeCCccCCCEEEEEEEEEEecCcEEEEEEEEEEcccCcccCCceEEEEEEEEEEEEE
Confidence 34589999999999999999999999999999999999986 6 6999887665554
No 204
>2f41_A Transcription factor FAPR; 'HOT-DOG' fold, gene regulation; 2.50A {Bacillus subtilis} SCOP: d.38.1.5
Probab=88.99 E-value=0.91 Score=35.27 Aligned_cols=54 Identities=15% Similarity=0.198 Sum_probs=44.4
Q ss_pred eeecceeeeccCCCCCCCeEEeEEeec--ceeCCeeeEEEEEEccCCCEEEEEeccc
Q 040957 361 SLSLDHSMWFHRSFRADDWLLFVIVSP--VASKARGFVSGEMFNTKGELLVSLTQEA 415 (430)
Q Consensus 361 ~~sld~si~f~~~~~~~~W~l~~~~~~--~~~~gr~~~~~~i~~~~G~lvA~~~Q~~ 415 (430)
..+...++.|.+|+.+++.+..+.+.. ....++...+++++ .+|++|+++.-..
T Consensus 60 ~~~~~~~i~F~~Pv~~Gd~l~~~a~v~~~~~~~~~~~v~~~~~-~~g~~v~~g~~~~ 115 (121)
T 2f41_A 60 ALTASADIRFTRQVKQGERVVAKAKVTAVEKEKGRTVVEVNSY-VGEEIVFSGRFDM 115 (121)
T ss_dssp CCEEEEEEEECSCCBTTCEEEEEEEEEEECSSSSCEEEEEEEE-ETTEEEEEEEEEE
T ss_pred EEEEEeeEEEeCCcCCCCEEEEEEEEEEEEccCCEEEEEEEEE-ECCEEEEEEEEEE
Confidence 445667899999999999999999988 66778888999988 7899998776543
No 205
>2own_A Putative oleoyl-[acyl-carrier protein] thioestera; NP_784467.1, oleoyl thioesterase (putative); 2.00A {Lactobacillus plantarum} SCOP: d.38.1.8 d.38.1.8
Probab=88.81 E-value=4 Score=36.29 Aligned_cols=79 Identities=4% Similarity=-0.122 Sum_probs=58.3
Q ss_pred CCceeehhHHHHHHHHHHhccCCCCCcceeeeeeeccCcCCCCCeEEEEEEeeeCCC-eeEEEEEEEECCeeEEEEEEec
Q 040957 160 KFGKVFGGQLVGQALAAASKTVDCLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNS-FATRRVDAIQKGNIIFTLLASF 238 (430)
Q Consensus 160 ~~~~~~GG~~~a~al~Aa~~~~~~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~-~s~~~V~~~Q~g~~~~~~~~sf 238 (430)
.++++|-+.-+.-+..|.....-....+.++++.|.++...+..+.+.+...+-|++ ..+...++..+|++++++...+
T Consensus 175 ~~gHVnn~~Y~~~~e~a~~~~~~~~~~v~~~~i~Y~~~~~~gd~l~v~~~v~~~~~~~s~~~~~~i~~~~~~~a~~~~~~ 254 (262)
T 2own_A 175 PNRHVNNAHYFDWLVDTLPATFLLQHDLVHVDVRYENEVKYGQTVTAHANILPSEVADQVTTSHLIEVDDEKCCEVTIQW 254 (262)
T ss_dssp TTSSBCGGGHHHHHHHHSCHHHHHTEEEEEEEEEECSCCCTTCEEEEEEEEECCSSTTEEEEEEEEEETTEEEEEEEEEE
T ss_pred cccCchHHHHHHHHHHHhHHHHhhcceEEEEEEEEccCcCCCCEEEEEEEEeecCCCceEEEEEEEecCCEEEEEEEEEE
Confidence 355777777777666554311111457899999999999998899999999999987 4555667777999888876654
No 206
>2hx5_A Hypothetical protein; thioesterase/thiol ester dehydrase-isomerase fold, structura genomics, joint center for structural genomics, JCSG; 1.50A {Prochlorococcus marinus} SCOP: d.38.1.1
Probab=88.63 E-value=1.6 Score=35.09 Aligned_cols=58 Identities=12% Similarity=-0.018 Sum_probs=51.3
Q ss_pred eeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEeccceecc
Q 040957 361 SLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEALLRS 419 (430)
Q Consensus 361 ~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~Q~~l~r~ 419 (430)
.+..++.+.|++|+..++++.++++....++-......++++ +|+++|++....+...
T Consensus 67 ~vv~~~~i~y~~p~~~gd~i~v~t~v~~~~~~s~~~~~~i~~-~g~~~a~~~~~~v~vd 124 (152)
T 2hx5_A 67 LPIIHCQADFRRPIHTGDALAMELRPERLNPNSFQVHFEFRC-EEQIAAHALIRHLAIN 124 (152)
T ss_dssp CCEEEEEEEECSCCCTTCEEEEEEEEEEEETTEEEEEEEEEE-TTEEEEEEEEEEECEE
T ss_pred EEEEEEEEEEcCCCCCCCEEEEEEEEEEeCCcEEEEEEEEEE-CCEEEEEEEEEEEEEe
Confidence 456778999999999999999999999999999999999998 8999999988877654
No 207
>2o5u_A Thioesterase; putative thioesterese,, hydrolase; 1.91A {Pseudomonas aeruginosa} SCOP: d.38.1.1 PDB: 2av9_A 2o6t_A 2o6b_A 2o6u_A
Probab=88.48 E-value=1.3 Score=35.37 Aligned_cols=60 Identities=7% Similarity=-0.064 Sum_probs=52.0
Q ss_pred eeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEc-cCCCEEEEEeccceecc
Q 040957 360 ASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFN-TKGELLVSLTQEALLRS 419 (430)
Q Consensus 360 ~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~-~~G~lvA~~~Q~~l~r~ 419 (430)
.....++.|.|++|+..++++.++++....++-......+|++ .+|+++|++....+...
T Consensus 63 ~~vv~~~~i~y~~~~~~gd~v~v~t~v~~~~~~s~~~~~~i~~~~~g~~~a~~~~~~v~vd 123 (148)
T 2o5u_A 63 IGLVVSSSCDYFAPVAFPQRIEMGLRVARLGNSSVQYELALFLEGQREACAAGRFVHVFVE 123 (148)
T ss_dssp EEEEEEEEEEECSCCCTTSCEEEEEEEEEECSSEEEEEEEEEESSCCBCSEEEEEEEEEEE
T ss_pred eeEEEEEEEEEcCcccCCCEEEEEEEEEEeCCcEEEEEEEEEECCCceEEEEEEEEEEEEE
Confidence 3567788999999999999999999999888888999999997 68999999988776643
No 208
>2xem_A DYNE7, TEBC; biosynthetic protein, polyketide biosynthesis, enediyne anti agent, thioesterase; HET: SSV; 2.10A {Micromonospora chersina} PDB: 2xfl_A
Probab=88.47 E-value=1.7 Score=34.90 Aligned_cols=59 Identities=15% Similarity=-0.058 Sum_probs=52.0
Q ss_pred eeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEc---cCCCEEEEEeccceecc
Q 040957 361 SLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFN---TKGELLVSLTQEALLRS 419 (430)
Q Consensus 361 ~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~---~~G~lvA~~~Q~~l~r~ 419 (430)
.+..+..|.|.+|+..++.+.+++.....++-......+|++ .+|+++|++....+...
T Consensus 62 ~vv~~~~i~y~~~~~~gd~v~v~t~v~~~~~~s~~~~~~i~~~~~~~g~~~a~~~~~~v~vd 123 (150)
T 2xem_A 62 LVTVDCHADFYAEGSAFDEVEVRMMLDRLDGHRIAMSFDYVRVAPGPPTLLAQGRQTVACMR 123 (150)
T ss_dssp EEEEEEEEEECSCCCTTCEEEEEEEEEEEETTEEEEEEEEEEEESSSCEEEEEEEEEEEEEE
T ss_pred EEEEEEEEEECCCCCCCCEEEEEEEEEeeCCcEEEEEEEEEecCCCCCeEEEEEEEEEEEEE
Confidence 456778999999999999999999999999999999999999 69999999988877643
No 209
>1iq6_A (R)-hydratase, (R)-specific enoyl-COA hydratase; polyhydroxyalkanoate, aeromonas caviae, the hydratase 2 motif, lyase; 1.50A {Aeromonas punctata} SCOP: d.38.1.4
Probab=88.44 E-value=1.4 Score=34.50 Aligned_cols=54 Identities=19% Similarity=0.164 Sum_probs=43.8
Q ss_pred cceeeeccCCCCCCCeEEeEEeeccee--CCeeeEEEEEEccCCCEEEEEecccee
Q 040957 364 LDHSMWFHRSFRADDWLLFVIVSPVAS--KARGFVSGEMFNTKGELLVSLTQEALL 417 (430)
Q Consensus 364 ld~si~f~~~~~~~~W~l~~~~~~~~~--~gr~~~~~~i~~~~G~lvA~~~Q~~l~ 417 (430)
...++.|++|+.+++-+..+.+..... .|....+.++.|++|++|+++.-..++
T Consensus 78 ~~~~~rf~~Pv~~Gd~l~~~~~v~~~~~~~~~v~~~~~~~n~~g~~v~~~~~~~~~ 133 (134)
T 1iq6_A 78 LGQSLSFKLPVFVGDEVTAEVEVTALREDKPIATLTTRIFTQGGALAVTGEAVVKL 133 (134)
T ss_dssp EEEEEEECSCCBTTCEEEEEEEEEEECSSSSEEEEEEEEECTTSCEEEEEEEEEEC
T ss_pred EEEEEEEcCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEEeCCCCEEEEeEEEEEc
Confidence 457889999999999998888876654 467778889999999999998765543
No 210
>3ir3_A HTD2, 3-hydroxyacyl-thioester dehydratase 2; structural GENO structural genomics consortium, SGC, lyase; 1.99A {Homo sapiens}
Probab=87.89 E-value=2.1 Score=34.48 Aligned_cols=57 Identities=5% Similarity=-0.007 Sum_probs=48.4
Q ss_pred cceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEE-ccCCCEEEEEeccceeccC
Q 040957 364 LDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMF-NTKGELLVSLTQEALLRSP 420 (430)
Q Consensus 364 ld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~-~~~G~lvA~~~Q~~l~r~~ 420 (430)
...++.|++|+.+++-+..+.+......+++..+.+.. +++|++|+++.-..+++.+
T Consensus 88 ~~~~~rf~~PV~~Gd~l~~~~~v~~~~~~~~~v~~~~~~~~~G~~V~~g~~~~~~~~~ 145 (148)
T 3ir3_A 88 LSQEISFPAPLYIGEVVLASAEVKKLKRFIAIIAVSCSVIESKKTVMEGWVKVMVPEA 145 (148)
T ss_dssp EEEEEECCSCCBTTCEEEEEEEEEEEETTEEEEEEEEEETTTCCEEEEEEEEEECCCC
T ss_pred EEEEEEECCCcCCCCEEEEEEEEEEEcCCeEEEEEEEEEcCCCCEEEEEEEEEEecCC
Confidence 45688999999999999999998888888888888887 5899999999887776654
No 211
>2v1o_A Cytosolic acyl coenzyme A thioester hydrolase; acyl-COA thioesterase 7, serine esterase, protein structure, domain duplication, ACOT7, macrophage; HET: COA; 1.78A {Mus musculus}
Probab=87.87 E-value=5.1 Score=32.02 Aligned_cols=58 Identities=10% Similarity=-0.127 Sum_probs=47.1
Q ss_pred eeecce-eeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccC-----CCEEEEEeccceec
Q 040957 361 SLSLDH-SMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTK-----GELLVSLTQEALLR 418 (430)
Q Consensus 361 ~~sld~-si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~-----G~lvA~~~Q~~l~r 418 (430)
.+++.. ++.|++|+..++++.++++....++.......++|+.+ ++++|++.-.-+..
T Consensus 48 ~vt~~~~~i~f~~Pv~~gd~l~i~~~v~~~g~ss~~~~~~v~~~~~~~g~~~l~a~a~~~~v~v 111 (151)
T 2v1o_A 48 AALARVERTDFLSPMCIGEVAHVSAEITYTSKHSVEVQVHVMSENILTGTKKLTNKATLWYVPL 111 (151)
T ss_dssp EEEEEECCEECCSCCBTTCEEEEEEEEEEECSSCEEEEEEEEEECTTTCCEEEEEEEEEEEEEE
T ss_pred EEEEEEeeEEEeCCCCCCCEEEEEEEEEEeCCcEEEEEEEEEEecCCCCceEEEEEEEEEEEEE
Confidence 445553 89999999999999999999999999999999999864 46888777655443
No 212
>1lo7_A 4-hydroxybenzoyl-COA thioesterase; hot DOG fold, catalytic mechanism, hydrolase; HET: 4CO; 1.50A {Pseudomonas SP} SCOP: d.38.1.1 PDB: 1bvq_A* 1lo8_A* 1lo9_A*
Probab=87.83 E-value=1.5 Score=34.63 Aligned_cols=58 Identities=10% Similarity=-0.004 Sum_probs=50.9
Q ss_pred eeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEcc---CC-CEEEEEeccceec
Q 040957 361 SLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNT---KG-ELLVSLTQEALLR 418 (430)
Q Consensus 361 ~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~---~G-~lvA~~~Q~~l~r 418 (430)
.+..++.+.|++|+..++.+.+++.....++-......+|+++ +| +++|++....+..
T Consensus 59 ~v~~~~~i~y~~p~~~gd~v~v~~~v~~~~~~s~~~~~~i~~~~~~~g~~~~a~~~~~~v~v 120 (141)
T 1lo7_A 59 TPIVSCNASFVCTASYDDVLTIETCIKEWRRKSFVQRHSVSRTTPGGDVQLVMRADEIRVFA 120 (141)
T ss_dssp CCEEEEEEEECSCCCTTCEEEEEEEEEEECSSEEEEEEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred EEEEEEEEEEcCCCCCCCEEEEEEEEEEEcceEEEEEEEEEECCCCCCcEEEEEEEEEEEEE
Confidence 3566789999999999999999999999999899999999997 89 9999998877654
No 213
>1z54_A Probable thioesterase; hypothetical protein, structural genom NPPSFA, riken structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: d.38.1.1
Probab=87.82 E-value=1.5 Score=34.09 Aligned_cols=57 Identities=12% Similarity=-0.011 Sum_probs=49.8
Q ss_pred eeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEeccceec
Q 040957 361 SLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEALLR 418 (430)
Q Consensus 361 ~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~Q~~l~r 418 (430)
....++.+.|++|+..++++..+++....++-......++++ +|+++|++...-+..
T Consensus 54 ~v~~~~~i~y~~~~~~gd~v~v~~~v~~~~~~~~~~~~~i~~-~~~~~a~~~~~~v~v 110 (132)
T 1z54_A 54 FPVVELGLTFRAPARFGEVVEVRTRLAELSSRALLFRYRVER-EGVLLAEGFTRHLCQ 110 (132)
T ss_dssp CCEEEEEEEECSCCCTTCEEEEEEEEEEECSSEEEEEEEEEE-TTEEEEEEEEEEECE
T ss_pred EEEEEEEEEEeccCCCCCEEEEEEEEEEeCCeEEEEEEEEEE-CCEEEEEEEEEEEEE
Confidence 456788999999999999999999999888888999999998 689999998877654
No 214
>3khp_A MAOC family protein; dehydrogenase, oxidoreductase, structural genomics; HET: TLA; 2.30A {Mycobacterium tuberculosis H37RV}
Probab=87.15 E-value=3.5 Score=37.93 Aligned_cols=75 Identities=13% Similarity=-0.035 Sum_probs=55.5
Q ss_pred CceeehhHHHHHHHHHHhccCCC--CCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEE----EECCeeEEEE
Q 040957 161 FGKVFGGQLVGQALAAASKTVDC--LKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDA----IQKGNIIFTL 234 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~~~~--~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~----~Q~g~~~~~~ 234 (430)
+..++|-+.++++..+......+ ...+.+..+.|.+|..++..+.++++... +..-..++++ -|+|+++++.
T Consensus 226 ~~IaHG~~t~~l~~~~~~~~~~~g~~~~~~~~~~rF~~PV~~Gdtl~~~~~v~~--~g~v~~~~~~~~~~nq~G~~Vl~g 303 (311)
T 3khp_A 226 KPILHGLCTYGVAGRALVAELGGGVAANITSIAARFTKPVFPGETLSTVIWRTE--PGRAVFRTEVAGSDGAEARVVLDD 303 (311)
T ss_dssp SCCCCHHHHHHHHHHHHHHHTTTTCGGGEEEEEEEECSCCCTTCCEEEEEEEEE--TTEEEEEEEECC----CCEEEEEE
T ss_pred CcEechHHHHHHHHHHHHHhhccCCcceEEEEEEEEecccCCCCEEEEEEEEEc--CCEEEEEEEEEeeecCCCCEEEEC
Confidence 34689999999888777665522 23467899999999999999999998764 4455667776 6899998887
Q ss_pred EEe
Q 040957 235 LAS 237 (430)
Q Consensus 235 ~~s 237 (430)
.+.
T Consensus 304 ~~~ 306 (311)
T 3khp_A 304 GAV 306 (311)
T ss_dssp EEE
T ss_pred eEE
Confidence 653
No 215
>1vpm_A Acyl-COA hydrolase; NP_241664.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative hydrolase; HET: COA; 1.66A {Bacillus halodurans} SCOP: d.38.1.1 PDB: 3sps_A
Probab=86.87 E-value=1.7 Score=36.02 Aligned_cols=60 Identities=15% Similarity=0.022 Sum_probs=50.5
Q ss_pred eeeecce-eeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccC---C--CEEEEEeccceecc
Q 040957 360 ASLSLDH-SMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTK---G--ELLVSLTQEALLRS 419 (430)
Q Consensus 360 ~~~sld~-si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~---G--~lvA~~~Q~~l~r~ 419 (430)
..++.+. ++.|++|+..++++.++++....++-......++|+++ | +++|++.-..+...
T Consensus 65 ~~vt~~~~~i~f~~pv~~gd~l~v~~~v~~~g~ss~~~~~~i~~~~~~~g~~~l~a~a~~t~V~vd 130 (169)
T 1vpm_A 65 AVVTASIDSVDFKSSATVGDALELEGFVTHTGRTSMEVYVRVHSNNLLTGERTLTTESFLTMVAVD 130 (169)
T ss_dssp EEEEEEECCCCCCSCCBTTEEEEEEEEEEEECSSEEEEEEEEEEEETTTCCEEEEEEEEEEEEEEC
T ss_pred CEEEEEeeeEEEeCCCCCCCEEEEEEEEEEECCcEEEEEEEEEEecCCCCceEEEEEEEEEEEEEC
Confidence 3567776 99999999999999999999999999999999999875 4 78988877665543
No 216
>2oaf_A Thioesterase superfamily; YP_508616.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; HET: CIT PGE; 2.00A {Jannaschia SP} SCOP: d.38.1.1
Probab=86.70 E-value=1.8 Score=34.84 Aligned_cols=57 Identities=7% Similarity=-0.092 Sum_probs=49.9
Q ss_pred eeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEeccceec
Q 040957 361 SLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEALLR 418 (430)
Q Consensus 361 ~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~Q~~l~r 418 (430)
.+..++.|.|++|+..++++.++++....++-......+|++ +|+++|++....+..
T Consensus 71 ~vv~~~~i~y~~~~~~gd~v~v~t~v~~~~~~s~~~~~~i~~-~g~~~a~~~~~~v~v 127 (151)
T 2oaf_A 71 TPFVRLEMDFKSPVTPRHILKCHTWPTRLGTKSITFRVDGVQ-DGVTCFVGAFTCVFT 127 (151)
T ss_dssp CCEEEEEEEECSCCCTTSCEEEEEEEEEECSSEEEEEEEEEE-TTEEEEEEEEEEEEE
T ss_pred EEEEEEEEEECCCCcCCCEEEEEEEEEEeCCcEEEEEEEEEE-CCEEEEEEEEEEEEE
Confidence 456778999999999999999999999998888999999996 899999998877664
No 217
>2ali_A Hypothetical protein PA2801; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.75A {Pseudomonas aeruginosa} SCOP: d.38.1.1 PDB: 3qy3_A
Probab=86.58 E-value=3.8 Score=33.23 Aligned_cols=59 Identities=2% Similarity=-0.084 Sum_probs=51.1
Q ss_pred eeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEcc-C-CCEEEEEeccceec
Q 040957 360 ASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNT-K-GELLVSLTQEALLR 418 (430)
Q Consensus 360 ~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~-~-G~lvA~~~Q~~l~r 418 (430)
..+..+..|.|.+|+..++++.++++....++-......+|++. + |+++|++....+..
T Consensus 77 ~~vv~~~~i~y~~p~~~gd~v~v~t~v~~~~~~s~~~~~~i~~~~~~g~~~a~a~~~~v~v 137 (158)
T 2ali_A 77 GPVVLQSLHTYLKPVVHPATVVVELYAGRLGTSSLVLEHRLHTLEDPQGTYGEGHCKLVWV 137 (158)
T ss_dssp EEEEEEEEEEECSCCCSSCEEEEEEEEEEECSSEEEEEEEEEESSCTTSCCEEEEEEEEEE
T ss_pred eEEEEEEEeEEeccccCCCEEEEEEEEEEecCcEEEEEEEEEECCCCCEEEEEEEEEEEEE
Confidence 35667889999999999999999999998888889999999996 7 99999998876654
No 218
>4i4j_A ACP-polyene thioesterase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: TAR; 2.78A {Streptomyces globisporus}
Probab=86.44 E-value=2 Score=35.04 Aligned_cols=78 Identities=9% Similarity=-0.030 Sum_probs=58.5
Q ss_pred CceeehhHHHHHHHHHHhcc-------------CCCCCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEEC
Q 040957 161 FGKVFGGQLVGQALAAASKT-------------VDCLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQK 227 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~-------------~~~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~ 227 (430)
.+.+|.+..+..+-.|.... -+-...+..+++.|++|...+..+.+.+...+-|++..++..+++..
T Consensus 26 ~Ghv~~~~yl~~~e~ar~~~~~~~G~~~~~~~~~g~~~vv~~~~i~y~~p~~~gd~v~v~t~v~~~~~~s~~~~~~i~~~ 105 (159)
T 4i4j_A 26 VGNVYYVNYLRWQGRCRELFLKERAPSVLAEVQEDLKLFTLKVDCEFFAEITAFDELSIRMRLSELRQTQLEFTFDYIKL 105 (159)
T ss_dssp TSCBCHHHHHHHHHHHHHHHHHHTCHHHHHHHTTTEEEEEEEEEEEECSCCCTTCEEEEEEEEEEECSSEEEEEEEEEEE
T ss_pred CccCcHHHHHHHHHHHHHHHHHHhCCCHHHHhcCCceEEEEEEEeEECCCCCCCCEEEEEEEEEEecCcEEEEEEEEEEC
Confidence 45788887766664443211 11135678899999999999999999999999999988888888875
Q ss_pred -----CeeEEEEEEec
Q 040957 228 -----GNIIFTLLASF 238 (430)
Q Consensus 228 -----g~~~~~~~~sf 238 (430)
|++++++...+
T Consensus 106 ~~~~~g~~~a~~~~~~ 121 (159)
T 4i4j_A 106 GDDGGETLVARGRQRI 121 (159)
T ss_dssp CSSSCEEEEEEEEEEE
T ss_pred CCCCCCeEEEEEEEEE
Confidence 77887775543
No 219
>1s9c_A Peroxisomal multifunctional enzyme type 2; hot-DOG fold, hydratase 2 motif, lyase; 3.00A {Homo sapiens} SCOP: d.38.1.4 d.38.1.4 PDB: 2cdh_S
Probab=86.42 E-value=1.8 Score=39.62 Aligned_cols=78 Identities=9% Similarity=0.013 Sum_probs=56.1
Q ss_pred CceeehhHHHHHHHHHHhccCCC--CCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEECCeeEEEEEEec
Q 040957 161 FGKVFGGQLVGQALAAASKTVDC--LKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKGNIIFTLLASF 238 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~~~~--~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~g~~~~~~~~sf 238 (430)
+.-+||.++++.+..++.....+ ...+.++.+.|.+|..++..+.++++. +|. .-+.++++.|+|++++.+.+.+
T Consensus 211 ~~IahG~~~~~~~~~~~~~~~~~~~~~~~~~~~~rf~~PV~~Gdtl~~~~~~--~~~-~v~~~~~~~~~g~~v~~~~~~~ 287 (298)
T 1s9c_A 211 KPILHGLCTFGFSARRVLQQFADNDVSRFKAVKARFAKPVYPGQTLQTEMWK--EGN-RIHFQTKVQETGDIVISNAYVD 287 (298)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHSTTCGGGEEEEEEEECSCCCTTCEEEEEEEE--ETT-EEEEEEEETTTTEEEEEEEEEE
T ss_pred CcccChHHHHHHHHHHHHHHhccCCceeEEEEEEEEcCCcCCCCEEEEEEEE--eCC-EEEEEEEEEeCCcEEEEeEEEE
Confidence 45799999988777666554432 234567899999999998888887775 333 4555666678999998888776
Q ss_pred ccc
Q 040957 239 QKE 241 (430)
Q Consensus 239 ~~~ 241 (430)
...
T Consensus 288 ~~~ 290 (298)
T 1s9c_A 288 LAP 290 (298)
T ss_dssp EC-
T ss_pred EEe
Confidence 443
No 220
>2q78_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE MLC; 2.20A {Thermotoga maritima MSB8} SCOP: d.38.1.7
Probab=86.35 E-value=5 Score=32.55 Aligned_cols=60 Identities=3% Similarity=-0.039 Sum_probs=52.9
Q ss_pred eeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEeccceeccC
Q 040957 360 ASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEALLRSP 420 (430)
Q Consensus 360 ~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~Q~~l~r~~ 420 (430)
..+..+.++.+..|.+.+..+..+++.....+.+...+.++||++| +||.++++-.+..+
T Consensus 74 ~tVG~~v~v~Hlapt~~G~~Vta~A~l~~v~gr~l~f~V~A~d~~~-~Ig~Gth~R~IV~~ 133 (153)
T 2q78_A 74 TAVVVETLARHVKAVPTGTRVAVGVRVVGVVGNRVKFRGIVMSGDE-KILEAEFVRAIVPR 133 (153)
T ss_dssp EEEEEEEEEEECSCCBSSEEEEEEEEEEEEETTEEEEEEEEEETTE-EEEEEEEEEEEEEH
T ss_pred eEEEEEEEeEECcCCCCCCEEEEEEEEEEECCCEEEEEEEEEECCc-eEEEEEEEEEEEeH
Confidence 3566788888888888888999999999999999999999999985 99999999888754
No 221
>2c2i_A RV0130; hotdog, hydratase, lyase, structural proteomics in europe, spine, structural genomics; 1.8A {Mycobacterium tuberculosis} SCOP: d.38.1.4
Probab=86.27 E-value=1 Score=36.40 Aligned_cols=79 Identities=9% Similarity=-0.155 Sum_probs=49.9
Q ss_pred CCceeehhHHHHHHHHHHhccCC-CC--C--cceeeeeeeccCcCCCCCeEEEEEE--eee---CCCeeEEEEEE--EEC
Q 040957 160 KFGKVFGGQLVGQALAAASKTVD-CL--K--IVHSLHCYFLLVGDLNIPIIYQVHR--VRD---GNSFATRRVDA--IQK 227 (430)
Q Consensus 160 ~~~~~~GG~~~a~al~Aa~~~~~-~~--~--~~~s~~~~Fl~~~~~~~pi~~~V~~--lr~---Gr~~s~~~V~~--~Q~ 227 (430)
++..++|..+++++...+....+ ++ . ......+.|.+|..++..+.++++. ++. |+..-+..+++ .|+
T Consensus 57 ~~~IahG~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~rF~~PV~~Gd~l~~~~~v~~~~~~~~g~~~v~~~~~v~~~~~ 136 (151)
T 2c2i_A 57 GTTIAHGFMTLALLPRLQHQMYTVKGVKLAINYGLNKVRFPAPVPVGSRVRATSSLVGVEDLGNGTVQATVSTTVEVEGS 136 (151)
T ss_dssp SSCBCCHHHHHHTHHHHHHTTCEESSCSCEEEEEEEEEECCSCCBTTCEEEEEEEEEEEEEEETTEEEEEEEEEEEETTC
T ss_pred CCceecHHHHHHHHHHHHHhhcCcCCcceeeeeeeeEEEECCCcCCCCEEEEEEEEEEEEEcCCCcEEEEEEEEEEEcCC
Confidence 34578999988887666544332 11 1 1223468999999998888777654 444 43344445444 457
Q ss_pred CeeEEEEEEec
Q 040957 228 GNIIFTLLASF 238 (430)
Q Consensus 228 g~~~~~~~~sf 238 (430)
|++++++.+.+
T Consensus 137 g~~v~~~~~~~ 147 (151)
T 2c2i_A 137 AKPACVAESIV 147 (151)
T ss_dssp SSCSEEEEEEE
T ss_pred CceEEEEEEEE
Confidence 88887776654
No 222
>2b3n_A Hypothetical protein AF1124; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.25A {Archaeoglobus fulgidus} PDB: 2b3m_A 3k67_A
Probab=86.05 E-value=2.3 Score=34.80 Aligned_cols=54 Identities=17% Similarity=0.136 Sum_probs=46.6
Q ss_pred ecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEecccee
Q 040957 363 SLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEALL 417 (430)
Q Consensus 363 sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~Q~~l~ 417 (430)
....++.|++|+.+++-+..+.+......|+...++++ +++|++|+++.-..++
T Consensus 105 ~~~~~~rF~~PV~~GD~L~~~~~v~~~~~~~v~~~~~~-~~~G~~V~~g~~~v~v 158 (159)
T 2b3n_A 105 LLEQSFRYTSPVRIGDVVRVEGVVSGVEKNRYTIDVKC-YTGDKVVAEGVVKVLI 158 (159)
T ss_dssp EEEEEEEECSCCCTTCEEEEEEEEEEEETTEEEEEEEE-EETTEEEEEEEEEEEE
T ss_pred eeeeeeEECCCcCCCCEEEEEEEEEEEcCCEEEEEEEE-EeCCeEEEEEEEEEEE
Confidence 45578999999999999999998887788898999999 9999999998766554
No 223
>1y7u_A Acyl-COA hydrolase; structural genomics, coenzyme A, protein structure initiative, PSI, midwest center for structural GE MCSG; HET: COA; 2.80A {Bacillus cereus} SCOP: d.38.1.1
Probab=85.95 E-value=2.4 Score=35.17 Aligned_cols=58 Identities=9% Similarity=0.012 Sum_probs=47.3
Q ss_pred eeecce-eeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccC---C--CEEEEEeccceec
Q 040957 361 SLSLDH-SMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTK---G--ELLVSLTQEALLR 418 (430)
Q Consensus 361 ~~sld~-si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~---G--~lvA~~~Q~~l~r 418 (430)
.++.+. +|.|++|+..++++.++.+..+.++-......++|++| | +++|++.-.-+..
T Consensus 62 ~vt~~~d~i~F~~Pv~~gd~l~v~a~V~~~G~ss~~v~~~v~~~~~~~g~~~l~a~a~~t~V~v 125 (174)
T 1y7u_A 62 CVTASMDWVDFLHPVRSSDCVSYESFVIWTGRTSMEVFVKVVSEYLISGEKRIAATSFVTFVAL 125 (174)
T ss_dssp EEEEEECCCCCCSCCCTTCEEEEEEEEEEECSSEEEEEEEEEEECTTTCCEEEEEEEEEEEEEE
T ss_pred eEEEEEccEEEcCCCCCCCEEEEEEEEEEeCCCEEEEEEEEEEEcCCCCcEEEEEEEEEEEEEE
Confidence 445554 89999999999999999999999999999999999864 4 6888777665544
No 224
>4ien_A Putative acyl-COA hydrolase; hot DOG fold; HET: COA GDP; 2.00A {Neisseria meningitidis}
Probab=85.60 E-value=4.6 Score=33.08 Aligned_cols=58 Identities=9% Similarity=0.012 Sum_probs=46.8
Q ss_pred eeecce-eeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccC-----CCEEEEEeccceec
Q 040957 361 SLSLDH-SMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTK-----GELLVSLTQEALLR 418 (430)
Q Consensus 361 ~~sld~-si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~-----G~lvA~~~Q~~l~r 418 (430)
..++.. +|.|++|+..++++.++.+..+.++-....+.++|.+| ++++|++.-.-+..
T Consensus 57 ~vt~~~~~i~F~~Pv~~gd~l~v~a~v~~~Grss~~v~~~v~~~~~~~g~~~~~a~a~~t~V~v 120 (163)
T 4ien_A 57 CVTLSVDKVLFKEPIHIGDLVTFYAAVNYTGRTSMEIGIRVEAQNIRTGEIRHTNSCYFTMVAV 120 (163)
T ss_dssp EEEEEEECEECCSCCBTTCEEEEEEEEEEECSSEEEEEEEEEEECTTTCCEEEEEEEEEEEEEE
T ss_pred EEEEEEeeEEEeCcCCCCCEEEEEEEEEEccCCEEEEEEEEEEecCCCCcEEEEEEEEEEEEEc
Confidence 334444 69999999999999999999999999999999999764 36888877665554
No 225
>3kh8_A MAOC-like dehydratase; hot DOG domain, lyase; 2.00A {Phytophthora capsici}
Probab=83.63 E-value=3.6 Score=38.24 Aligned_cols=79 Identities=13% Similarity=-0.008 Sum_probs=57.9
Q ss_pred CceeehhHHHHHHHHHHhccCCC--CCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEECCeeEEE-EEEe
Q 040957 161 FGKVFGGQLVGQALAAASKTVDC--LKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKGNIIFT-LLAS 237 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~~~~--~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~g~~~~~-~~~s 237 (430)
+..++|=++++++..++.....+ ...+.+..+.|.+|..++..+.++++..- +..-..++++.|+|+++++ +.+.
T Consensus 246 ~~IaHG~~t~al~~~~~~~~~~~~~~~~~~~~~~rF~~PV~~Gdtl~~~~~~~~--~g~v~~~~~~~q~g~~Vl~~g~a~ 323 (332)
T 3kh8_A 246 QPILHGLCSMGVASRALFKQFCGGDVARFKSIRVRFSSPCFPGETIQTRMWQEG--SGKVLFQAVVKERGAVIVDGGEFV 323 (332)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHSTTCGGGEEEEEEEECSCCCTTCEEEEEEEECS--TTEEEEEEEETTTTEEEEEEEEEE
T ss_pred CceECHHHHHHHHHHHHHHhhcCCCcceEEEEEEEEecccCCCCEEEEEEEEEC--CCEEEEEEEEccCCcEEEeCeEEE
Confidence 34689999999888776655422 23456899999999999888888888764 4335566666788999988 7776
Q ss_pred cccc
Q 040957 238 FQKE 241 (430)
Q Consensus 238 f~~~ 241 (430)
+..+
T Consensus 324 ~~~p 327 (332)
T 3kh8_A 324 YTQD 327 (332)
T ss_dssp ECCG
T ss_pred EecC
Confidence 6543
No 226
>4i4j_A ACP-polyene thioesterase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: TAR; 2.78A {Streptomyces globisporus}
Probab=83.62 E-value=2.9 Score=33.95 Aligned_cols=61 Identities=11% Similarity=-0.048 Sum_probs=52.4
Q ss_pred eeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEcc----CCCEEEEEeccceeccC
Q 040957 360 ASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNT----KGELLVSLTQEALLRSP 420 (430)
Q Consensus 360 ~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~----~G~lvA~~~Q~~l~r~~ 420 (430)
..+..++.|.|++|+..++.+.++++....++-+....-+||+. +|+++|++....+....
T Consensus 62 ~~vv~~~~i~y~~p~~~gd~v~v~t~v~~~~~~s~~~~~~i~~~~~~~~g~~~a~~~~~~v~vd~ 126 (159)
T 4i4j_A 62 KLFTLKVDCEFFAEITAFDELSIRMRLSELRQTQLEFTFDYIKLGDDGGETLVARGRQRIACMRG 126 (159)
T ss_dssp EEEEEEEEEEECSCCCTTCEEEEEEEEEEECSSEEEEEEEEEEECSSSCEEEEEEEEEEEEEEES
T ss_pred eEEEEEEEeEECCCCCCCCEEEEEEEEEEecCcEEEEEEEEEECCCCCCCeEEEEEEEEEEEEEC
Confidence 34567889999999999999999999999999888899999986 79999999887766543
No 227
>2pzh_A Hypothetical protein HP_0496; lipid, acyl-COA, bacterial membrane, TOL-PAL system, thioest hot-DOG fold, hydrolase; 1.70A {Helicobacter pylori}
Probab=83.51 E-value=3.3 Score=32.20 Aligned_cols=60 Identities=7% Similarity=-0.143 Sum_probs=51.4
Q ss_pred eeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccC--------CCEEEEEeccceecc
Q 040957 360 ASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTK--------GELLVSLTQEALLRS 419 (430)
Q Consensus 360 ~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~--------G~lvA~~~Q~~l~r~ 419 (430)
..+..++.|.|++|+..++.+.+++.....++-......+|++.+ |+++|++....+...
T Consensus 48 ~~vv~~~~i~y~~~~~~gd~v~v~~~v~~~~~~s~~~~~~i~~~~~~~~~~~~g~~~a~~~~~~v~vd 115 (135)
T 2pzh_A 48 VFVIRSIKADFFTPASLGQVLEIRTQIKELRKVFVVLFQEIYCIQNASLEPMKPFKVFASEIKFGFVN 115 (135)
T ss_dssp EEEEEEEEEEECSCCBTTCEEEEEEEEEEECSSEEEEEEEEEEEECTTCCCCCCEEEEEEEEEEEEEC
T ss_pred eEEEEEEEEEEccccccCCEEEEEEEEEEecceEEEEEEEEEeCCCccccccCceEEEEEEEEEEEEE
Confidence 345677899999999999999999999999988999999999875 689999988776654
No 228
>1pn2_A Peroxisomal hydratase-dehydrogenase-epimerase; hot-DOG fold, hydratase 2 motif, lyase; 1.95A {Candida tropicalis} SCOP: d.38.1.4 d.38.1.4 PDB: 1pn4_A*
Probab=83.13 E-value=3.5 Score=37.27 Aligned_cols=76 Identities=8% Similarity=0.047 Sum_probs=54.2
Q ss_pred CCceeehhHHHHHHHHHHhccCCCCCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEECCeeEEE-EEEec
Q 040957 160 KFGKVFGGQLVGQALAAASKTVDCLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKGNIIFT-LLASF 238 (430)
Q Consensus 160 ~~~~~~GG~~~a~al~Aa~~~~~~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~g~~~~~-~~~sf 238 (430)
.+.-+||.++++++..+..... ..+.++.+.|.+|..++..+.+++++ .++..-+.++.+..+|+.++. +.+.+
T Consensus 199 ~~~iahG~~~~~~~~~~~~~~~---~~~~~~~~rf~~Pv~~Gdtl~~~~~~--~~~g~v~~~~~~~~~~~~v~~~g~a~~ 273 (280)
T 1pn2_A 199 PKPILHGMCTYGLSAKALIDKF---GMFNEIKARFTGIVFPGETLRVLAWK--ESDDTIVFQTHVVDRGTIAINNAAIKL 273 (280)
T ss_dssp SSCCCCHHHHHHHHHHHHHHHH---CCEEEEEEEECSCCCTTCEEEEEEEE--CSSSEEEEEEEETTTTEEEEEEEEEEE
T ss_pred CCcEecHHHHHHHHHHHHHHHH---HHHheEEEEEcCCcCCCCEEEEEEEE--eCCCEEEEEEEEEECCeEEEEeEEEEE
Confidence 3457999999998877765554 23678899999999998888888884 434455566666555665554 77766
Q ss_pred cc
Q 040957 239 QK 240 (430)
Q Consensus 239 ~~ 240 (430)
..
T Consensus 274 ~~ 275 (280)
T 1pn2_A 274 VG 275 (280)
T ss_dssp CC
T ss_pred Ee
Confidence 43
No 229
>3qoo_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, hot-DOG superfamily; 1.25A {Thermanaerovibrio acidaminovorans}
Probab=83.11 E-value=7.6 Score=30.89 Aligned_cols=59 Identities=15% Similarity=0.091 Sum_probs=52.3
Q ss_pred eeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEeccceeccC
Q 040957 361 SLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEALLRSP 420 (430)
Q Consensus 361 ~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~Q~~l~r~~ 420 (430)
..-+..++.|..|.+.++.+...++.....+.+...+.++||++|. |+.+..+..+..+
T Consensus 66 tVG~~v~v~Hlapt~~G~~V~~~a~v~~v~gr~v~f~v~a~d~~~~-I~~G~h~r~iV~~ 124 (138)
T 3qoo_A 66 SVGVRSEVHNLAPAVLGDDVTFTVTVDRVEGNRVVLSMKADDPHGP-VATGLQERVVVST 124 (138)
T ss_dssp EEEEEEEEEECSCCBTTCEEEEEEEEEEEETTEEEEEEEEEETTEE-EEEEEEEEEEEEH
T ss_pred EEEEEEEEEEcCCCCCCCEEEEEEEEEEEcCCEEEEEEEEEECCeE-EEEEEEEEEEEcH
Confidence 4556778888889999999999999999999999999999999996 9999999888753
No 230
>3d6x_A (3R)-hydroxymyristoyl-[acyl-carrier-protein] DEHY; FABZ, hot DOG fold, dehydratase, lipid biosynthesis, lipid synthesis, lyase; HET: MSE; 2.59A {Campylobacter jejuni subsp}
Probab=83.04 E-value=3.4 Score=33.03 Aligned_cols=56 Identities=18% Similarity=0.247 Sum_probs=45.6
Q ss_pred eeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEeccceec
Q 040957 361 SLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEALLR 418 (430)
Q Consensus 361 ~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~Q~~l~r 418 (430)
...++ .+.|++|+.+++.+.++.+.....+|....+++++. +|++||++.=..+++
T Consensus 89 l~~i~-~~kf~~pV~pGd~l~~~~~v~~~~~~~~~~~~~~~~-~g~~v~~~~~~~~~~ 144 (146)
T 3d6x_A 89 FTGID-GAKFRNPVRPGDRLDYEMSVVKNRGNMWIFKGQAFV-DGNLVAEAELKAMIV 144 (146)
T ss_dssp EEEEE-EEEECSCCCTTCEEEEEEEEEEEETTEEEEEEEEEE-TTEEEEEEEEEEEEC
T ss_pred Eeeee-eeEECcccCCCCEEEEEEEEEEeeCCEEEEEEEEEE-CCEEEEEEEEEEEEE
Confidence 34444 588999999999999999998888999999999995 899999986555443
No 231
>4ffu_A Oxidase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgrc, PS biology; HET: MSE; 1.80A {Sinorhizobium meliloti}
Probab=82.79 E-value=3.7 Score=34.23 Aligned_cols=55 Identities=15% Similarity=0.230 Sum_probs=43.2
Q ss_pred eeeccCCCCCCCeEEeEEeecceeC-------CeeeEEEEEEccCCCEEEEEeccceeccCC
Q 040957 367 SMWFHRSFRADDWLLFVIVSPVASK-------ARGFVSGEMFNTKGELLVSLTQEALLRSPK 421 (430)
Q Consensus 367 si~f~~~~~~~~W~l~~~~~~~~~~-------gr~~~~~~i~~~~G~lvA~~~Q~~l~r~~~ 421 (430)
++.|++|+.+++-+..+.+...... |....+.++.|++|++|+++.-..+++.+.
T Consensus 110 ~~rF~~PV~~GDtL~~~~~v~~~~~~~s~~~~g~v~~~~~~~nq~Ge~V~~g~~~v~v~~r~ 171 (176)
T 4ffu_A 110 RLRFVRPVHIGDTIRTRVTIAAKEDDPKRPGAGRVVERCEVINQRGEVVLAADHILIVERKP 171 (176)
T ss_dssp EEEECSCCCTTCEEEEEEEEEEEEECTTCTTEEEEEEEEEEECTTSCEEEEEEEEEEEECCC
T ss_pred eEEEcCCccCCCEEEEEEEEEEEEecccCCCceEEEEEEEEEeCCCCEEEEEEEEEEEecCC
Confidence 8899999999999888887655432 344667777899999999999888887654
No 232
>3hm0_A Probable thioesterase; niaid, ssgcid, decode, UW, SBRI, infectious disease, rhizobiales, bacteremia, endocarditis, bacillary angiomatosis; 2.50A {Bartonella henselae}
Probab=82.73 E-value=5.9 Score=32.54 Aligned_cols=59 Identities=19% Similarity=0.151 Sum_probs=51.1
Q ss_pred eeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEeccceecc
Q 040957 360 ASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEALLRS 419 (430)
Q Consensus 360 ~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~Q~~l~r~ 419 (430)
..+...+.|.|++++..++.+.++++....++-+.....+|++ +|+++|++....+...
T Consensus 91 ~~vv~~~~i~y~~p~~~gd~i~V~t~v~~~~~~s~~~~~~i~~-~g~~~a~a~~~~V~vD 149 (167)
T 3hm0_A 91 FFVVRHMEINFSRPAQIDNLLTIKTRISRLQGARFFMEQYILH-GESMLVTAKVEIALIN 149 (167)
T ss_dssp EEEEEEEEEEECSCCCTTCEEEEEEEEEEECSSEEEEEEEEEE-TTEEEEEEEEEEEEEE
T ss_pred EEEEEEEEEEEecCCCCCCEEEEEEEEEEeCCeEEEEEEEEEE-CCEEEEEEEEEEEEEC
Confidence 3456778999999999999999999999999889999999998 8999999988776653
No 233
>4b0b_A 3-hydroxydecanoyl-[acyl-carrier-protein] dehydrat; lyase, fatty acid biosynthesis, bacterial virulence, drug DI; HET: 54F; 1.90A {Pseudomonas aeruginosa} PDB: 4b0c_A* 4b0j_A* 4b8u_A* 4b0i_A*
Probab=81.91 E-value=8 Score=32.02 Aligned_cols=77 Identities=13% Similarity=-0.004 Sum_probs=51.9
Q ss_pred CCCceeehhHHHHHHHHHHhccCC-CC-Ccceee-eeeeccCcCCCCC-eEEEEEEee---eCCCeeEEEEEEEECCeeE
Q 040957 159 PKFGKVFGGQLVGQALAAASKTVD-CL-KIVHSL-HCYFLLVGDLNIP-IIYQVHRVR---DGNSFATRRVDAIQKGNII 231 (430)
Q Consensus 159 ~~~~~~~GG~~~a~al~Aa~~~~~-~~-~~~~s~-~~~Fl~~~~~~~p-i~~~V~~lr---~Gr~~s~~~V~~~Q~g~~~ 231 (430)
|...++.+=-.+||+..+...... .+ ..+.++ .+.|.++..|+.. ++++|+..+ +.+.+.....+++.+|+++
T Consensus 75 PvmPGvl~iE~mAQ~~~~~~~~~~~~~~~~~~gi~~~kF~~~V~Pgd~~l~l~v~i~~~~~~~~~~~~~~~~~~vdg~~v 154 (171)
T 4b0b_A 75 PVMPGCLGLDAMWQLVGFYLGWQGNPGRGRALGSGEVKFFGQVLPTAKKVTYNIHIKRTINRSLVLAIADGTVSVDGREI 154 (171)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTTCCSEEEEEEESEEEECCCCCTTCCEEEEEEEEEEEEESSSEEEEEEEEEEETTEEE
T ss_pred CcCcHHHHHHHHHHHHHHHHhcccccCceEEeeeeEEEEecCccCCCEEEEEEEEEEEEeecCCCEEEEEEEEEECCEEE
Confidence 334445555568888766543221 11 112222 6789999999776 788887776 4467888999999999999
Q ss_pred EEEE
Q 040957 232 FTLL 235 (430)
Q Consensus 232 ~~~~ 235 (430)
+.+.
T Consensus 155 aeae 158 (171)
T 4b0b_A 155 YSAE 158 (171)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8886
No 234
>3kuv_A Fluoroacetyl coenzyme A thioesterase; fluoroacetyl-COA thioesterase FLK, hot DOG folding, thioeste hydrolase; 1.50A {Streptomyces cattleya} PDB: 3kuw_A 3kvu_A* 3p2q_A 3p2r_A 3p2s_A 3kv7_A 3kv8_A 3kvz_A* 3kw1_A* 3kx7_A 3kx8_A 3kvi_A 3p3i_A 3p3f_A
Probab=81.81 E-value=5.3 Score=31.86 Aligned_cols=60 Identities=10% Similarity=-0.157 Sum_probs=53.1
Q ss_pred eeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEeccceeccC
Q 040957 360 ASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEALLRSP 420 (430)
Q Consensus 360 ~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~Q~~l~r~~ 420 (430)
....++.++.+..|.+.++.+...++.....+.+...+.++||+++ +|+.+..+..+..+
T Consensus 66 ~tVG~~v~v~Hlapt~~G~~V~~~a~l~~v~gr~~~f~v~a~d~~~-~I~~G~h~r~iV~~ 125 (139)
T 3kuv_A 66 GSLGTAICVTHTAATPPGLTVTVTAELRSVEGRRLSWRVSAHDGVD-EIGSGTHERAVIHL 125 (139)
T ss_dssp EEEEEEEEEECCSCCCTTSEEEEEEEEEEEETTEEEEEEEEECSSS-EEEEEEEEEEEEEH
T ss_pred eEEEEEEEEEEccCCCCCCEEEEEEEEEEECCCEEEEEEEEEECCE-EEEEEEEEEEEECH
Confidence 3567778888988999999999999999999999999999999865 99999999988753
No 235
>3lw3_A HP0420 homologue; hotdog-fold, structural genomics, unknown function; 1.60A {Helicobacter felis} PDB: 3lwg_A
Probab=81.66 E-value=8.9 Score=30.79 Aligned_cols=78 Identities=14% Similarity=0.025 Sum_probs=58.4
Q ss_pred HHHHHHHHHhhhhhhhhhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEE
Q 040957 331 LHRCVVAFASDLIFSSVSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVS 410 (430)
Q Consensus 331 ~~~~~la~~sD~~~~~~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~ 410 (430)
.|=..+.-++|...... .+. ....+++-+|.|.+|+..++-+..+++....++.....+.++| .+++.|..
T Consensus 55 vHGG~ifslAD~aa~~a-~n~-------~~~Vt~~~~I~Fl~Pv~~Gd~l~A~A~v~~~g~r~~~v~V~v~-~~~~~V~~ 125 (145)
T 3lw3_A 55 VHAGFIVGAASFAALCA-LNK-------KNSLISSMKVNLLAPIEIKQEIYFNATITHTSSKKSTIRVEGE-FMEIKVFE 125 (145)
T ss_dssp ECHHHHHHHHHHHHHHH-HCC-------TTEEEEEEEEEECSCCCTTCCEEEEEEEEEECSSEEEEEEEEE-ETTEEEEE
T ss_pred EeHHHHHHHHHHHHHHH-hCC-------CCEEEEEEEEEECccCCCCCEEEEEEEEEEECCCEEEEEEEEE-ECCEEEEE
Confidence 34445666778654332 221 1246788889999999999999999999999999999999999 77788887
Q ss_pred Eecccee
Q 040957 411 LTQEALL 417 (430)
Q Consensus 411 ~~Q~~l~ 417 (430)
+.=..+.
T Consensus 126 G~f~~~~ 132 (145)
T 3lw3_A 126 GDFEILV 132 (145)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 7654444
No 236
>3khp_A MAOC family protein; dehydrogenase, oxidoreductase, structural genomics; HET: TLA; 2.30A {Mycobacterium tuberculosis H37RV}
Probab=81.31 E-value=2.7 Score=38.67 Aligned_cols=60 Identities=20% Similarity=0.151 Sum_probs=46.8
Q ss_pred eeecceeeeccCCCCCCCeEEeEEeecceeC------CeeeEEEEEEccCCCEEEEEe-ccceeccC
Q 040957 361 SLSLDHSMWFHRSFRADDWLLFVIVSPVASK------ARGFVSGEMFNTKGELLVSLT-QEALLRSP 420 (430)
Q Consensus 361 ~~sld~si~f~~~~~~~~W~l~~~~~~~~~~------gr~~~~~~i~~~~G~lvA~~~-Q~~l~r~~ 420 (430)
..=.++.|.||+|++.++-+..+.+.....+ -....+.+++|++|++|++.. |.-++|..
T Consensus 99 lvH~eq~i~~~rPl~~g~~l~~~~~v~~v~dk~gg~g~~v~~~~~~~d~~Ge~v~~~~~st~~~Rg~ 165 (311)
T 3khp_A 99 LLHGSQGIRLHAPLPAAGKLSVVTEVADIQDKGEGKNAIVVLRGRGCDPESGSLVAETLTTLVLRGQ 165 (311)
T ss_dssp CTTCEEEEEESSCCCSSEEEEEEEEEEEEEECCTTSCEEEEEEEEEECTTTCCEEEEEEEEEEETTC
T ss_pred eEEcCceEEEECCCCCCCEEEEEEEEEEEEEecCCceEEEEEEEEEEcCCCCEEEEEEeeEEEEEcC
Confidence 4567789999999998887777666555432 245567888999999999999 99999964
No 237
>2bi0_A Hypothetical protein RV0216; conserved hypothetical, hotdog-fold, structural proteomics in europe, spine, structural genomics; 1.9A {Mycobacterium tuberculosis} SCOP: d.38.1.4 d.38.1.4
Probab=81.22 E-value=11 Score=34.91 Aligned_cols=77 Identities=10% Similarity=0.143 Sum_probs=51.3
Q ss_pred CceeehhHHHHHHHHHHhccCCCCCcceee--e-eeeccCcCCCCCeEEEEEE--eeeCC--------CeeEEEEEEE-E
Q 040957 161 FGKVFGGQLVGQALAAASKTVDCLKIVHSL--H-CYFLLVGDLNIPIIYQVHR--VRDGN--------SFATRRVDAI-Q 226 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~~~~~~~~~s~--~-~~Fl~~~~~~~pi~~~V~~--lr~Gr--------~~s~~~V~~~-Q 226 (430)
+..++|-.+++++...... ++ ...+..+ . +.|++|..++..+..+++. ++..+ .+.+.++++. |
T Consensus 65 ~~IahG~lt~~l~~~~~~~-~~-~~~~~~~g~~~~rF~~PV~~GDtl~~~~~V~~~~~~~sr~~~~~~g~v~~~~~~~nq 142 (337)
T 2bi0_A 65 GPLAHPGLVCDVAIGQSTL-AT-QRVKANLFYRGLRFHRFPAVGDTLYTRTEVVGLRANSPKPGRAPTGLAGLRMTTIDR 142 (337)
T ss_dssp SCBCCHHHHHHHHHHHHTT-TT-TTCSEEEEEECEEBSSCCBTTCEEEEEEEEEEEEECCCCTTSCCEEEEEEEEEEECT
T ss_pred CceECHHHHHHHHHHHhhc-cC-ccceeeeeeeeEEEeCCccCCCEeEEEEEEEeEEeccccccCCCcEEEEEEEEEEeC
Confidence 4578998888887777665 54 3334333 3 8899999998877776654 44332 3444555554 8
Q ss_pred CCeeEEEEEEecc
Q 040957 227 KGNIIFTLLASFQ 239 (430)
Q Consensus 227 ~g~~~~~~~~sf~ 239 (430)
+|++++.+.+...
T Consensus 143 ~G~~V~~~~~~vl 155 (337)
T 2bi0_A 143 TDRLVLDFYRCAM 155 (337)
T ss_dssp TCCEEEEEEEEEE
T ss_pred CCCEEEEEEEEEE
Confidence 8998887776654
No 238
>3q62_A 3-hydroxydecanoyl-[acyl-carrier-protein] dehydrat; structural genomics, center for structural genomics of infec diseases, csgid; HET: MES; 1.40A {Yersinia pseudotuberculosis} SCOP: d.38.1.2 PDB: 1mka_A* 1mkb_A
Probab=80.45 E-value=9.8 Score=31.62 Aligned_cols=77 Identities=13% Similarity=0.059 Sum_probs=51.1
Q ss_pred CCCceeehhHHHHHHHHHHhccCC-CCC-cceee-eeeeccCcCCCCC-eEEEEEEeee---CCCeeEEEEEEEECCeeE
Q 040957 159 PKFGKVFGGQLVGQALAAASKTVD-CLK-IVHSL-HCYFLLVGDLNIP-IIYQVHRVRD---GNSFATRRVDAIQKGNII 231 (430)
Q Consensus 159 ~~~~~~~GG~~~a~al~Aa~~~~~-~~~-~~~s~-~~~Fl~~~~~~~p-i~~~V~~lr~---Gr~~s~~~V~~~Q~g~~~ 231 (430)
|...++.+=-.+||+..+...... ++. .+.++ .+.|.++..|+.. ++++|+..+. .+.+.....+++.+|+++
T Consensus 79 PvmPGvl~iE~mAQ~~~~~~~~~~~~~~~~l~gi~~~kF~~~V~PGd~~L~l~v~i~~~~~~~~~~~~~~~~~~vdg~~v 158 (175)
T 3q62_A 79 PVMPGCLGLDAMWQLVGFYLGWLGGEGKGRALGVGEVKFTGQVLPDAKKVTYRINFKRVIMRKLIMGVADGEVLVDGKVI 158 (175)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTTCCSEEEEEEESCEEECCCCCTTCCEEEEEEEEEEEEC--CCEEEEEEEEEETTEEE
T ss_pred CcCcHHHHHHHHHHHHHHHHhcccCCCceEEeeeeEEEEcccccCCCEEEEEEEEEEEEeccCCCEEEEEEEEEECCEEE
Confidence 334445555567887666542211 111 12222 6779999999877 7888887763 567888999999999999
Q ss_pred EEEE
Q 040957 232 FTLL 235 (430)
Q Consensus 232 ~~~~ 235 (430)
+.+.
T Consensus 159 aea~ 162 (175)
T 3q62_A 159 YTAT 162 (175)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8885
No 239
>4e3e_A MAOC domain protein dehydratase; structural genomics, protein structure initiative, nysgrc, PSI-biology; 1.90A {Chloroflexus aurantiacus}
Probab=79.06 E-value=6.5 Score=36.80 Aligned_cols=55 Identities=13% Similarity=0.018 Sum_probs=44.6
Q ss_pred eeeccCCCCCCCeEEeEEeecceeC------CeeeEEEEEEccCCCEEEEEeccceeccCC
Q 040957 367 SMWFHRSFRADDWLLFVIVSPVASK------ARGFVSGEMFNTKGELLVSLTQEALLRSPK 421 (430)
Q Consensus 367 si~f~~~~~~~~W~l~~~~~~~~~~------gr~~~~~~i~~~~G~lvA~~~Q~~l~r~~~ 421 (430)
.+.|++|+.+++=+..+.+...... |....+.++.|++|++|+++....+++.+.
T Consensus 92 ~~rF~~PV~~GDtL~~~~~V~~~~~~~~~~~g~v~~~~~~~nq~Ge~V~~~~~~~~v~~r~ 152 (352)
T 4e3e_A 92 GGRFGAVVYPGDTLSTTSKVIGLRQNKDGKTGVVYVHSVGVNQWDEVVLEYIRWVMVRKRD 152 (352)
T ss_dssp EEEECSCCCTTCEEEEEEEEEEEEECTTSSEEEEEEEEEEECTTSCEEEEEEEEEEEECSS
T ss_pred eEEEcCCcCCCCEEEEEEEEEEEEEcCCCCcEEEEEEEEEEeCCCCEEEEEEEEEEEecCC
Confidence 7899999999998888877665432 245567788999999999999999998765
No 240
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=78.82 E-value=12 Score=32.40 Aligned_cols=70 Identities=14% Similarity=0.243 Sum_probs=51.4
Q ss_pred ceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEecceEEEEe
Q 040957 31 VIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIALTELTCLVL 110 (430)
Q Consensus 31 ~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~~~~~~l~i 110 (430)
+....+++|+.+-..-.+.+.+++|++|.+++. . + ++ ...+.+||++=- .......+.|.+++.++.|
T Consensus 39 ~~~~~~~~G~~~~~h~h~~~~~~~Vl~G~~~~~--i---~-~~---~~~l~~Gd~~~~---p~~~~H~~~a~~~~~~l~i 106 (227)
T 3rns_A 39 ISLFSLAKDEEITAEAMLGNRYYYCFNGNGEIF--I---E-NN---KKTISNGDFLEI---TANHNYSIEARDNLKLIEI 106 (227)
T ss_dssp EEEEEECTTCEEEECSCSSCEEEEEEESEEEEE--E---S-SC---EEEEETTEEEEE---CSSCCEEEEESSSEEEEEE
T ss_pred EEEEEECCCCccCccccCCCEEEEEEeCEEEEE--E---C-CE---EEEECCCCEEEE---CCCCCEEEEECCCcEEEEE
Confidence 345678999999888888999999999999999 3 2 22 257888876533 1223456678899999988
Q ss_pred cc
Q 040957 111 PH 112 (430)
Q Consensus 111 ~~ 112 (430)
..
T Consensus 107 ~~ 108 (227)
T 3rns_A 107 GE 108 (227)
T ss_dssp EE
T ss_pred Ee
Confidence 44
No 241
>2f3x_A Transcription factor FAPR; 'HOT-DOG' fold / malonyl-COA complex, gene regulation; HET: MLC; 3.10A {Bacillus subtilis} SCOP: d.38.1.5
Probab=78.65 E-value=4.1 Score=33.23 Aligned_cols=54 Identities=15% Similarity=0.198 Sum_probs=44.0
Q ss_pred eeecceeeeccCCCCCCCeEEeEEeec--ceeCCeeeEEEEEEccCCCEEEEEeccc
Q 040957 361 SLSLDHSMWFHRSFRADDWLLFVIVSP--VASKARGFVSGEMFNTKGELLVSLTQEA 415 (430)
Q Consensus 361 ~~sld~si~f~~~~~~~~W~l~~~~~~--~~~~gr~~~~~~i~~~~G~lvA~~~Q~~ 415 (430)
..+...++.|.+|+.+++-+..+++.. ....++....++++ .+|++|+++.-..
T Consensus 96 ~~t~~~~i~F~rPV~~GD~L~a~a~v~~~~~~~~~~~v~~~~~-~~g~~V~~g~~~~ 151 (157)
T 2f3x_A 96 ALTASADIRFTRQVKQGERVVAKAKVTAVEKEKGRTVVEVNSY-VGEEIVFSGRFDM 151 (157)
T ss_dssp CEEEEEEEEECSCCBTTCEEEEEEEEEEEETGGGEEEEEEEEE-ETTEEEEEEEEEE
T ss_pred EEEEEEEEEEeCCCCCCCEEEEEEEEEEEEccCCEEEEEEEEE-ECCEEEEEEEEEE
Confidence 445566899999999999999999988 66677888899888 7899998776544
No 242
>2gll_A FABZ, (3R)-hydroxymyristoyl-acyl carrier protein dehydratase; lyase; 2.20A {Helicobacter pylori} PDB: 2glm_A* 2glp_A* 2glv_A 3dp1_A* 3cf8_A* 3cf9_A* 3d04_A* 3doy_A* 3doz_A* 3dp0_A* 3b7j_A* 3dp2_A* 3dp3_A* 3ed0_A*
Probab=77.36 E-value=6.2 Score=32.63 Aligned_cols=56 Identities=14% Similarity=0.179 Sum_probs=45.2
Q ss_pred eeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEeccceec
Q 040957 361 SLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEALLR 418 (430)
Q Consensus 361 ~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~Q~~l~r 418 (430)
...++ .+.|++|+.+++.+.++.+......|....+++++ .+|++||++.=..++.
T Consensus 113 l~gi~-~vkF~~pV~PGD~L~i~v~v~~~~~~~~~~~~~~~-v~g~~va~g~~~~~~~ 168 (171)
T 2gll_A 113 FMTID-KVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQ-VDGKVVAEAELKAMIA 168 (171)
T ss_dssp EEEEE-EEEECSCCCTTCEEEEEEEEEEESSSEEEEEEEEE-ETTEEEEEEEEEEEEE
T ss_pred EEeee-EEEECCccCCCCEEEEEEEEEEEeCCEEEEEEEEE-ECCEEEEEEEEEEEEe
Confidence 33443 58899998889999999998888889999999999 4999999986655544
No 243
>3bbj_A Putative thioesterase II; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.16A {Thermobifida fusca}
Probab=76.40 E-value=3.8 Score=36.84 Aligned_cols=51 Identities=16% Similarity=0.143 Sum_probs=43.1
Q ss_pred cceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEeccce
Q 040957 364 LDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEAL 416 (430)
Q Consensus 364 ld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~Q~~l 416 (430)
++.+++|.+|.+.+ .+.++.+..+.+......+++++ ++|+++++++-.-.
T Consensus 59 ~sl~~~fl~p~~~g-~i~~~~~~~r~Gr~~~~~~v~~~-q~g~~v~~a~a~f~ 109 (272)
T 3bbj_A 59 VSSSYHFHRPASSG-PAEIETRVLKRGRTVTTVQTTLF-QEGRTILTGTLATA 109 (272)
T ss_dssp EEEEEEECSCCCSE-EEEEEEEEEECCSSCEEEEEEEE-ETTEEEEEEEEEEE
T ss_pred EEEEEEEeCCCCCc-cEEEEEEEEEcCCCEEEEEEEEE-ECCEEEEEEEEEEE
Confidence 56899999988876 99999999988888899999999 58999988776443
No 244
>2ess_A Acyl-ACP thioesterase; NP_810988.1, structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Bacteroides thetaiotaomicron} SCOP: d.38.1.8 d.38.1.8
Probab=76.03 E-value=11 Score=33.06 Aligned_cols=59 Identities=2% Similarity=-0.215 Sum_probs=51.9
Q ss_pred eeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEeccceec
Q 040957 360 ASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEALLR 418 (430)
Q Consensus 360 ~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~Q~~l~r 418 (430)
..+-.++.|.|++++..++-+.+++.....++-+....-+|++++|+++|++....++.
T Consensus 59 ~~vv~~~~i~y~~~~~~~d~l~V~t~v~~~~~~~~~~~~~i~~~~g~~~a~~~~~~v~v 117 (248)
T 2ess_A 59 TWVLSRLAIELDEMPYQYEKFSVQTWVENVYRLFTDRNFAVIDKDGKKIGYARSVWAMI 117 (248)
T ss_dssp EEEEEEEEEEESCCCBTTCEEEEEEEEEEECSSEEEEEEEEECTTSCEEEEEEEEEEEE
T ss_pred EEEEEEeEEEEccCCCCCCEEEEEEEEeecCCcEEEEEEEEEcCCCCEEEEEEEEEEEE
Confidence 34567899999998889999999999999998899999999999999999998776664
No 245
>4h4g_A (3R)-hydroxymyristoyl-[acyl-carrier-protein] DEHY; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Burkholderia thailandensis}
Probab=74.86 E-value=8.8 Score=31.34 Aligned_cols=59 Identities=10% Similarity=0.104 Sum_probs=48.3
Q ss_pred eeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEeccceeccCC
Q 040957 361 SLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEALLRSPK 421 (430)
Q Consensus 361 ~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~Q~~l~r~~~ 421 (430)
..+++ .+.|++++.+++-+.++.+......|.+..+|+++ -||++||++.=.+.+++.+
T Consensus 99 l~~i~-~~kF~~~V~PGd~L~i~v~~~~~~~~~~~~~~~~~-v~g~~va~ael~~~~~~~~ 157 (160)
T 4h4g_A 99 FVGID-NARFKRVVEPGDQLILNVTFERYIRGIWKFKAVAE-VDGKVAAEAELMCTVKTAD 157 (160)
T ss_dssp EEEEE-EEEECSCCCTTCEEEEEEEEEEEETTEEEEEEEEE-ETTEEEEEEEEEEEECC--
T ss_pred Eeccc-eEEECcccCCCCEEEEEEEEEEeeCCEEEEEEEEE-ECCEEEEEEEEEEEEccCC
Confidence 44554 46788888889999999999999999999999998 6899999998777777654
No 246
>1s9c_A Peroxisomal multifunctional enzyme type 2; hot-DOG fold, hydratase 2 motif, lyase; 3.00A {Homo sapiens} SCOP: d.38.1.4 d.38.1.4 PDB: 2cdh_S
Probab=74.45 E-value=5.7 Score=36.15 Aligned_cols=59 Identities=10% Similarity=-0.011 Sum_probs=43.1
Q ss_pred eeecceeeeccCCCCCCCeEEeEEeeccee----CCeeeEEEEEEccCCCEEEEEeccceeccC
Q 040957 361 SLSLDHSMWFHRSFRADDWLLFVIVSPVAS----KARGFVSGEMFNTKGELLVSLTQEALLRSP 420 (430)
Q Consensus 361 ~~sld~si~f~~~~~~~~W~l~~~~~~~~~----~gr~~~~~~i~~~~G~lvA~~~Q~~l~r~~ 420 (430)
..=.++.+.||+|+++++-+..+.+..... +.....+.+++| +|++|++..|..++|..
T Consensus 87 ~vH~~q~~~~~rPl~~g~~l~~~~~v~~v~~k~~G~~v~~~~~~~~-~Ge~v~~~~~~~~~Rg~ 149 (298)
T 1s9c_A 87 VLHGEQYLELYKPLPRAGKLKCEAVVADVLDKGSGVVIIMDVYSYS-EKELICHNQFSLFLVGS 149 (298)
T ss_dssp CEEEEEEEEESSCCCSSEEEEEEEEEEEEC-----CEEEEEEEEES-SSSEEEEEEEEEEC---
T ss_pred eeecceEEEEEccCCCCCEEEEEEEEEEEEECCCceEEEEEEEEEe-CCeEEEEEEEEEEEecC
Confidence 445678999999999888777766655442 233456778888 99999999999999864
No 247
>1u1z_A (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase; fatty acid biosynthesis, hot DOG fold, lyase; 2.50A {Pseudomonas aeruginosa} SCOP: d.38.1.6
Probab=73.58 E-value=9.2 Score=31.44 Aligned_cols=56 Identities=11% Similarity=-0.035 Sum_probs=46.0
Q ss_pred eeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEeccceec
Q 040957 361 SLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEALLR 418 (430)
Q Consensus 361 ~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~Q~~l~r 418 (430)
...++ .+.|++|+.+++-+.++.+......|....+++++. +|++||++.-..+++
T Consensus 109 ~~gi~-~vrF~~pV~pGD~L~~~v~v~~~~~g~~~~~~~~~v-~g~~v~~a~~~~~~~ 164 (168)
T 1u1z_A 109 FVGSD-KLRFRQPVLPGDQLQLHAKFISVKRSIWKFDCHATV-DDKPVCSAEIICAER 164 (168)
T ss_dssp EEEEE-EEEECSCCCTTCEEEEEEEEEEEETTEEEEEEEEEE-TTEEEEEEEEEEEEE
T ss_pred Eeecc-EEEECCcCCCCCEEEEEEEEEEEeCCEEEEEEEEEE-CCEEEEEEEEEEEEe
Confidence 34443 589999988999999999988888899999999997 999999987655554
No 248
>4i83_A 3-hydroxyacyl-[acyl-carrier-protein] dehydratase; FABZ, hot DOG fold, thioesterase, lyase; 2.60A {Neisseria meningitidis}
Probab=73.10 E-value=8.5 Score=31.03 Aligned_cols=57 Identities=18% Similarity=0.175 Sum_probs=45.7
Q ss_pred eeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEeccceec
Q 040957 360 ASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEALLR 418 (430)
Q Consensus 360 ~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~Q~~l~r 418 (430)
...+++ .+.|++++.+++-+.++.+.....+|....+++++ .+|++||++.=...++
T Consensus 94 ~l~gi~-~vkF~~pV~PGd~L~i~~~v~~~~~~~~~~~~~~~-v~g~~va~~~l~~~~~ 150 (152)
T 4i83_A 94 FFAGID-EARFKRQVIPGDQLVFEVELLTSRRGIGKFNAVAK-VDGQVAVEAIIMCAKR 150 (152)
T ss_dssp EEEEEC-SEEECSCCCTTCEEEEEEEEEEEETTEEEEEEEEE-ETTEEEEEEEEEEEC-
T ss_pred EEeeec-EEEEccccCCCCEEEEEEEEEEeeCCEEEEEEEEE-ECCEEEEEEEEEEEEE
Confidence 344554 77888888888889999998888899999999999 7999999987655443
No 249
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=72.84 E-value=21 Score=26.81 Aligned_cols=65 Identities=25% Similarity=0.211 Sum_probs=42.9
Q ss_pred EEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEecceEEEE
Q 040957 33 VKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIALTELTCLV 109 (430)
Q Consensus 33 ~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~~~~~~l~ 109 (430)
...+++|..+-..-.....+++|++|.+++. .. ++ ...+.+||.+=-. .+ ..-.+.+.+++.++.
T Consensus 40 ~~~l~~G~~~~~H~H~~~e~~~Vl~G~~~~~--i~---~~----~~~l~~Gd~i~ip-~~--~~H~~~~~~~~~~~~ 104 (114)
T 3fjs_A 40 RMVLPAGKQVGSHSVAGPSTIQCLEGEVEIG--VD---GA----QRRLHQGDLLYLG-AG--AAHDVNAITNTSLLV 104 (114)
T ss_dssp EEEECTTCEEEEECCSSCEEEEEEESCEEEE--ET---TE----EEEECTTEEEEEC-TT--CCEEEEESSSEEEEE
T ss_pred EEEECCCCccCceeCCCcEEEEEEECEEEEE--EC---CE----EEEECCCCEEEEC-CC--CcEEEEeCCCcEEEE
Confidence 4577888887766666779999999999998 32 22 3578888865432 12 233456667765444
No 250
>4a0z_A Transcription factor FAPR; lipid homeostasis; HET: MLC; 1.90A {Staphylococcus aureus} PDB: 4a0y_A 4a0x_A* 4a12_A
Probab=72.76 E-value=20 Score=30.12 Aligned_cols=52 Identities=12% Similarity=0.089 Sum_probs=45.7
Q ss_pred eeeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEe
Q 040957 360 ASLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLT 412 (430)
Q Consensus 360 ~~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~ 412 (430)
.+.|.+.+|.|.+|...++++..+++.....+..+.+++++++.| ++|+.+.
T Consensus 130 ~aVT~~~~I~fl~Pv~~Gd~Lva~A~v~~~~gr~~~v~V~i~~~d-~~Vf~G~ 181 (190)
T 4a0z_A 130 TVLTHESSIQFIEKVKLNDTVRAEARVVNQTAKHYYVEVKSYVKH-TLVFKGN 181 (190)
T ss_dssp EEEEEEEEEEECSCCBTTCEEEEEEEEEEECSSEEEEEEEEEETT-EEEEEEE
T ss_pred eeEeeehhhhhcccCCCCCEEEEEEEEEEeCCCEEEEEEEEEECC-EEEEEEE
Confidence 367888999999999999999999999999999999999999765 5887654
No 251
>1pn2_A Peroxisomal hydratase-dehydrogenase-epimerase; hot-DOG fold, hydratase 2 motif, lyase; 1.95A {Candida tropicalis} SCOP: d.38.1.4 d.38.1.4 PDB: 1pn4_A*
Probab=71.88 E-value=6.6 Score=35.39 Aligned_cols=62 Identities=13% Similarity=0.093 Sum_probs=47.2
Q ss_pred eeeecceeeeccC-CCCCCCeEEeEEeecceeC-C---eeeEEEEEEcc-CCCEEEEEeccceeccCC
Q 040957 360 ASLSLDHSMWFHR-SFRADDWLLFVIVSPVASK-A---RGFVSGEMFNT-KGELLVSLTQEALLRSPK 421 (430)
Q Consensus 360 ~~~sld~si~f~~-~~~~~~W~l~~~~~~~~~~-g---r~~~~~~i~~~-~G~lvA~~~Q~~l~r~~~ 421 (430)
...=.++.+.||+ |++.++-+..+.+.....+ | ....+.+++|+ +|++|++..+.-++|...
T Consensus 70 ~~vH~~q~~~~~r~Pl~~g~~l~~~~~v~~v~~kg~g~~v~~~~~~~~~~~Ge~v~~~~~t~~~Rg~~ 137 (280)
T 1pn2_A 70 LLLHGEHYLKVHSWPPPTEGEIKTTFEPIATTPKGTNVVIVHGSKSVDNKSGELIYSNEATYFIRNCQ 137 (280)
T ss_dssp GEEEEEEEEEECSSSCCSSEEEEEEEEEEEEEEETTEEEEEEEEEEEETTTCCEEEEEEEEEEETTCE
T ss_pred heEEeeEEEEEEcCCCCCCCEEEEEEEEEEEEECCCcEEEEEEEEEEeCCCCcEEEEEEEEEEEeccC
Confidence 3566788999999 9998888777666554421 2 23356788888 999999999999999753
No 252
>3cjy_A Putative thioesterase; YP_496845.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE PGE; 1.70A {Novosphingobium aromaticivorans}
Probab=70.51 E-value=8.3 Score=34.26 Aligned_cols=48 Identities=10% Similarity=-0.029 Sum_probs=41.8
Q ss_pred ceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEec
Q 040957 365 DHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQ 413 (430)
Q Consensus 365 d~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~Q 413 (430)
+.+++|.++.+.+.++.++++..+.+......+++++ ++|+++++++=
T Consensus 58 sl~~~fl~p~~~~~p~~~~v~~~r~Grs~~~~~v~~~-q~g~~~~~a~a 105 (259)
T 3cjy_A 58 QGSLQFVSFTPLGSVLDLTVEVLQSGRTLAQARVAGT-VDGRLVFHSGI 105 (259)
T ss_dssp EEEEEECSCCBTTCEEEEEEEEEEECSSCEEEEEEEE-ETTEEEEEEEE
T ss_pred EEEEEccCCcCCCCCEEEEEEEEEcCCCEEEEEEEEE-ECCEEEEEEEE
Confidence 5678999988888899999999999999999999999 78999887753
No 253
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=69.14 E-value=20 Score=26.68 Aligned_cols=64 Identities=19% Similarity=0.334 Sum_probs=38.5
Q ss_pred EecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEecceEEEEe
Q 040957 35 RYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIALTELTCLVL 110 (430)
Q Consensus 35 ~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~~~~~~l~i 110 (430)
.+++|..+-........+++|++|.+.+. . ++ + ...+.+||++=-. .+.++. +.+.+++.++.+
T Consensus 44 ~~~~g~~~~~H~h~~~e~~~vl~G~~~~~--i---~~-~---~~~l~~Gd~i~i~-~~~~H~--~~~~~~~~~~~i 107 (114)
T 2ozj_A 44 SFADGESVSEEEYFGDTLYLILQGEAVIT--F---DD-Q---KIDLVPEDVLMVP-AHKIHA--IAGKGRFKMLQI 107 (114)
T ss_dssp EEETTSSCCCBCCSSCEEEEEEEEEEEEE--E---TT-E---EEEECTTCEEEEC-TTCCBE--EEEEEEEEEEEE
T ss_pred EECCCCccccEECCCCeEEEEEeCEEEEE--E---CC-E---EEEecCCCEEEEC-CCCcEE--EEeCCCcEEEEE
Confidence 45566554434445678999999999988 3 22 2 3568898865332 223333 344467766655
No 254
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=67.64 E-value=14 Score=28.36 Aligned_cols=67 Identities=12% Similarity=0.028 Sum_probs=41.5
Q ss_pred EEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEecceEEEEec
Q 040957 33 VKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIALTELTCLVLP 111 (430)
Q Consensus 33 ~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~~~~~~l~i~ 111 (430)
...+++|..+-..- ..+.+++|++|.+.+. . +| + ...+++||++--- .+.++..+... ++++++.+-
T Consensus 44 ~~~~~pG~~~~~H~-~~~E~~~Vl~G~~~~~--~---~g-~---~~~l~~GD~v~ip-~g~~H~~~~~~-~~~~~l~v~ 110 (119)
T 3lwc_A 44 YGRYAPGQSLTETM-AVDDVMIVLEGRLSVS--T---DG-E---TVTAGPGEIVYMP-KGETVTIRSHE-EGALTAYVT 110 (119)
T ss_dssp EEEECTTCEEEEEC-SSEEEEEEEEEEEEEE--E---TT-E---EEEECTTCEEEEC-TTCEEEEEEEE-EEEEEEEEE
T ss_pred EEEECCCCCcCccC-CCCEEEEEEeCEEEEE--E---CC-E---EEEECCCCEEEEC-CCCEEEEEcCC-CCeEEEEEE
Confidence 45678887765443 6789999999999999 3 22 2 2568999876443 22333333221 455555543
No 255
>4gak_A Acyl-ACP thioesterase; MCSG, PSI-biology, structural genomics, midwest center for S genomics, hydrolase; HET: MSE; 1.90A {Spirosoma linguale}
Probab=67.51 E-value=14 Score=32.55 Aligned_cols=54 Identities=7% Similarity=0.054 Sum_probs=46.6
Q ss_pred CcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEE-CCeeEEEEEEec
Q 040957 185 KIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQ-KGNIIFTLLASF 238 (430)
Q Consensus 185 ~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q-~g~~~~~~~~sf 238 (430)
..+..+++.|.++...+..+++++....-||.++.|...+.- +|++++.|...+
T Consensus 59 wVv~~~~i~~~r~~~~~d~v~V~T~~~~~~~~~~~r~~~i~d~~g~~l~~a~s~w 113 (250)
T 4gak_A 59 WMLMRFCLRIHQYPRYGDTIQLMTYPTTVDKYFIHRDFRVLATDGTLLADARSTW 113 (250)
T ss_dssp EEEEEEEEEESSCCBTTCEEEEEEEEEEECSSEEEEEEEEEETTCCEEEEEEEEE
T ss_pred EEEEEEEEEEecCCCCCCEEEEEEEEEEcCCCEEEEEEEEEeCCCCEEEEEEEEE
Confidence 567889999999999999999999999999999999999874 588877776544
No 256
>2cf2_C Fatty acid synthase, DH domain; transferase, fatty acid metabolism, fatty acid biosynthesis, multienzyme; 4.30A {Sus scrofa} SCOP: d.38.1.2
Probab=67.29 E-value=35 Score=31.62 Aligned_cols=73 Identities=12% Similarity=0.040 Sum_probs=49.0
Q ss_pred eeehhHHHHHHHHHHhccC--CCCCcceee-eeeeccCcCCCCC-eEEEEEEeee---CCCeeEEEEEEEECCeeEEEEE
Q 040957 163 KVFGGQLVGQALAAASKTV--DCLKIVHSL-HCYFLLVGDLNIP-IIYQVHRVRD---GNSFATRRVDAIQKGNIIFTLL 235 (430)
Q Consensus 163 ~~~GG~~~a~al~Aa~~~~--~~~~~~~s~-~~~Fl~~~~~~~p-i~~~V~~lr~---Gr~~s~~~V~~~Q~g~~~~~~~ 235 (430)
++.+=-.+||+..+..... +....+.++ .+.|.++..|+.. ++++|+..+. .+.+.....+++-+|++++++.
T Consensus 79 Gvl~iE~maQ~~~~~~~~~~~~~~~~l~gi~~~kF~~~v~Pgd~~l~l~v~i~~~~~~~~~~~~~~~~~~v~g~~va~a~ 158 (342)
T 2cf2_C 79 GCLGLDAMWQLVGFYLGWLGGEGKGRALGVGEVKFTGQVLPTAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTAS 158 (342)
T ss_pred hHHHHHHHHHHHHHHHhhccCCCcEEEEEcCEEEECceecCCCEEEEEEEEEEEeecCCCCEEEEEEEEEECCEEEEEEE
Confidence 3444445577655543222 111112233 7789999998777 7888888776 4678888899999999999987
No 257
>2cf2_C Fatty acid synthase, DH domain; transferase, fatty acid metabolism, fatty acid biosynthesis, multienzyme; 4.30A {Sus scrofa} SCOP: d.38.1.2
Probab=66.79 E-value=26 Score=32.53 Aligned_cols=69 Identities=12% Similarity=-0.034 Sum_probs=47.6
Q ss_pred hHHHHHHHHHHhccC-CCC-Ccceee-eeeeccCcCCCC-CeEEEEEEeeeC---CCeeEEEEEEEECCeeEEEEE
Q 040957 167 GQLVGQALAAASKTV-DCL-KIVHSL-HCYFLLVGDLNI-PIIYQVHRVRDG---NSFATRRVDAIQKGNIIFTLL 235 (430)
Q Consensus 167 G~~~a~al~Aa~~~~-~~~-~~~~s~-~~~Fl~~~~~~~-pi~~~V~~lr~G---r~~s~~~V~~~Q~g~~~~~~~ 235 (430)
--.+||+..+..... .++ ....++ .+.|.++..|+. .++++|+..+.. +.+.....+++.+|++++.+.
T Consensus 254 iEamaQ~~~~~~~~~~~~~~~~~~gi~~~kF~~~V~PGd~~L~~~v~~~~~~~~~~~~~~~~~~~~v~g~~v~~a~ 329 (342)
T 2cf2_C 254 LDAMWQLVGFYLGWLGGEGKGRALGVGEVKFTGQVLPTAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTAS 329 (342)
T ss_pred HHHHHHHHHHHHhhcccCCceEeeccceEEECceecCCCeEEEEEEEEEEEecCCCCEEEEEEEEEECCEEEEEEE
Confidence 334577665553222 111 112333 678999999977 489999888654 678889999999999998886
No 258
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}
Probab=66.40 E-value=12 Score=37.94 Aligned_cols=75 Identities=9% Similarity=-0.008 Sum_probs=54.9
Q ss_pred CceeehhHHHHHHHHHHhccCCCC--CcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEECCeeEEEEEEec
Q 040957 161 FGKVFGGQLVGQALAAASKTVDCL--KIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKGNIIFTLLASF 238 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~~~~~--~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~g~~~~~~~~sf 238 (430)
+.-+||=+.+|+++.++.....++ ....+..+.|.+|..++..+.++++. +|+ .-..++++.|+|++++++....
T Consensus 521 ~~IahG~~t~~~~~~~~~~~~~~~~~~~~~~~~~rf~~PV~~gd~l~~~~~~--~~~-~v~~~~~~~~~g~~vl~g~~~~ 597 (613)
T 3oml_A 521 TPILHGLCTLGFSVRAVLAQFADNNPALFKAVKVRFSGPVIPGQTLRVDLWK--QGT-RINFRTVVVETGKEVISGAYVD 597 (613)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHSTTCGGGEEEEEEEECSCCCTTCEEEEEEEE--ETT-EEEEEEEETTTCCEEEEEEEEE
T ss_pred CceecHHHHHHHHHHHHHhhhcCCCceeEEEEEEEEcCCCCCCCEEEEEEEE--CCC-EEEEEEEEEECCcEEEECeEEE
Confidence 457899999999888877766433 24667899999999998888877743 443 3445566669999988886543
No 259
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=64.76 E-value=9.5 Score=31.60 Aligned_cols=70 Identities=9% Similarity=-0.077 Sum_probs=40.4
Q ss_pred ceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEecceEEEEe
Q 040957 31 VIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIALTELTCLVL 110 (430)
Q Consensus 31 ~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~~~~~~l~i 110 (430)
+....+++|...-.--.....+++|++|++.+. .. +|. ...+++||.+ -. .+.++.+.-..-++++++.+
T Consensus 81 ~~~v~l~PG~~~~~H~H~~eE~~~VLeGel~l~--ld--~ge----~~~L~~GDsi-~~-~g~~H~~~N~g~~~ar~l~V 150 (172)
T 3es1_A 81 IRVVDMLPGKESPMHRTNSIDYGIVLEGEIELE--LD--DGA----KRTVRQGGII-VQ-RGTNHLWRNTTDKPCRIAFI 150 (172)
T ss_dssp EEEEEECTTCBCCCBCCSEEEEEEEEESCEEEE--CG--GGC----EEEECTTCEE-EE-CSCCBEEECCSSSCEEEEEE
T ss_pred EEEEEECCCCCCCCeecCceEEEEEEeCEEEEE--EC--CCe----EEEECCCCEE-Ee-CCCcEEEEeCCCCCEEEEEE
Confidence 334567777643322333456789999999998 32 122 3578999998 32 22333333233345666655
No 260
>2c2i_A RV0130; hotdog, hydratase, lyase, structural proteomics in europe, spine, structural genomics; 1.8A {Mycobacterium tuberculosis} SCOP: d.38.1.4
Probab=64.42 E-value=11 Score=29.92 Aligned_cols=52 Identities=2% Similarity=-0.156 Sum_probs=38.3
Q ss_pred eeeeccCCCCCCCeEEeEEeecceeC---CeeeEEEE--EE-ccCCCEEEEEecccee
Q 040957 366 HSMWFHRSFRADDWLLFVIVSPVASK---ARGFVSGE--MF-NTKGELLVSLTQEALL 417 (430)
Q Consensus 366 ~si~f~~~~~~~~W~l~~~~~~~~~~---gr~~~~~~--i~-~~~G~lvA~~~Q~~l~ 417 (430)
..+.|++|+.+++-+..+.+...... |++....+ +. +++|++|+++.-..++
T Consensus 92 ~~~rF~~PV~~Gd~l~~~~~v~~~~~~~~g~~~v~~~~~v~~~~~g~~v~~~~~~~~~ 149 (151)
T 2c2i_A 92 NKVRFPAPVPVGSRVRATSSLVGVEDLGNGTVQATVSTTVEVEGSAKPACVAESIVRY 149 (151)
T ss_dssp EEEECCSCCBTTCEEEEEEEEEEEEEEETTEEEEEEEEEEEETTCSSCSEEEEEEEEE
T ss_pred eEEEECCCcCCCCEEEEEEEEEEEEEcCCCcEEEEEEEEEEEcCCCceEEEEEEEEEE
Confidence 46899999999999988887765543 66555555 43 7799999887765544
No 261
>4e3e_A MAOC domain protein dehydratase; structural genomics, protein structure initiative, nysgrc, PSI-biology; 1.90A {Chloroflexus aurantiacus}
Probab=63.90 E-value=41 Score=31.25 Aligned_cols=80 Identities=5% Similarity=-0.077 Sum_probs=48.9
Q ss_pred CceeehhHHHHHHHHHHhccCCCCC-c-ceeeeeeeccCcCCCCCeEEEEEEe--eeCCC----eeEEEEEEE-ECCeeE
Q 040957 161 FGKVFGGQLVGQALAAASKTVDCLK-I-VHSLHCYFLLVGDLNIPIIYQVHRV--RDGNS----FATRRVDAI-QKGNII 231 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~~~~~~-~-~~s~~~~Fl~~~~~~~pi~~~V~~l--r~Gr~----~s~~~V~~~-Q~g~~~ 231 (430)
+..++|-.++++++.......+... . .-.-.+.|.+|..++..+.++++.+ ++.++ +.+.++++. |+|+++
T Consensus 60 ~~iahG~l~~~l~~g~~~~~~~~~~~~~~g~~~~rF~~PV~~GDtL~~~~~V~~~~~~~~~~~g~v~~~~~~~nq~Ge~V 139 (352)
T 4e3e_A 60 RAPIDSLLVFHIVFGKTVPDISLNAIANLGYAGGRFGAVVYPGDTLSTTSKVIGLRQNKDGKTGVVYVHSVGVNQWDEVV 139 (352)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHTTTEEEEEEEEEEEECSCCCTTCEEEEEEEEEEEEECTTSSEEEEEEEEEEECTTSCEE
T ss_pred CCccCHHHHHHHHHhhcccccccccceeeEEeeEEEcCCcCCCCEEEEEEEEEEEEEcCCCCcEEEEEEEEEEeCCCCEE
Confidence 3457887777776555443332111 1 1122688999999988777666644 44322 555555654 799999
Q ss_pred EEEEEeccc
Q 040957 232 FTLLASFQK 240 (430)
Q Consensus 232 ~~~~~sf~~ 240 (430)
+++..++..
T Consensus 140 ~~~~~~~~v 148 (352)
T 4e3e_A 140 LEYIRWVMV 148 (352)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEE
Confidence 887765543
No 262
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=62.04 E-value=45 Score=24.59 Aligned_cols=66 Identities=20% Similarity=0.263 Sum_probs=40.5
Q ss_pred EEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEecceEEEEe
Q 040957 33 VKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIALTELTCLVL 110 (430)
Q Consensus 33 ~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~~~~~~l~i 110 (430)
...+++|..+-..-.....+++|++|.+.+. . +++ ...+.+|+++=-. .+.++ .+.+.+++.++.+
T Consensus 44 ~~~~~~g~~~~~H~H~~~e~~~vl~G~~~~~--~---~~~----~~~l~~Gd~~~ip-~~~~H--~~~~~~~~~~~~v 109 (115)
T 1yhf_A 44 VFSLDKGQEIGRHSSPGDAMVTILSGLAEIT--I---DQE----TYRVAEGQTIVMP-AGIPH--ALYAVEAFQMLLV 109 (115)
T ss_dssp EEEECTTCEEEEECCSSEEEEEEEESEEEEE--E---TTE----EEEEETTCEEEEC-TTSCE--EEEESSCEEEEEE
T ss_pred EEEECCCCccCCEECCCcEEEEEEeCEEEEE--E---CCE----EEEECCCCEEEEC-CCCCE--EEEECCCceEEEE
Confidence 3456777766544444678999999999988 3 222 2578888876432 22222 3445556666554
No 263
>4gak_A Acyl-ACP thioesterase; MCSG, PSI-biology, structural genomics, midwest center for S genomics, hydrolase; HET: MSE; 1.90A {Spirosoma linguale}
Probab=61.22 E-value=22 Score=31.18 Aligned_cols=59 Identities=17% Similarity=0.116 Sum_probs=49.0
Q ss_pred eeecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEeccceecc
Q 040957 361 SLSLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEALLRS 419 (430)
Q Consensus 361 ~~sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~Q~~l~r~ 419 (430)
-+-..+.|.|++++..++-+.+++.....++-++.-+-.|+|++|+++|.+.-.-++-.
T Consensus 59 wVv~~~~i~~~r~~~~~d~v~V~T~~~~~~~~~~~r~~~i~d~~g~~l~~a~s~wv~iD 117 (250)
T 4gak_A 59 WMLMRFCLRIHQYPRYGDTIQLMTYPTTVDKYFIHRDFRVLATDGTLLADARSTWLVFS 117 (250)
T ss_dssp EEEEEEEEEESSCCBTTCEEEEEEEEEEECSSEEEEEEEEEETTCCEEEEEEEEEEEEE
T ss_pred EEEEEEEEEEecCCCCCCEEEEEEEEEEcCCCEEEEEEEEEeCCCCEEEEEEEEEEeec
Confidence 34567889999988889999999999988888888888999999999988876655543
No 264
>1z6b_A Pffabz, fatty acid synthesis protein; malaria, beta-hydroxyacyl-ACP dehydra fatty acid biosynthesis, SAD phasing, lyase; 2.09A {Plasmodium falciparum} SCOP: d.38.1.6 PDB: 3az8_A* 3az9_A* 3aza_A* 3azb_A* 1zhg_A 2oki_A 2okh_A
Probab=58.45 E-value=26 Score=28.00 Aligned_cols=50 Identities=12% Similarity=0.128 Sum_probs=39.1
Q ss_pred eeeccCCCCCCCeEEeEEeecceeCC--eeeEEEEEEccCCCEEEE-Eecccee
Q 040957 367 SMWFHRSFRADDWLLFVIVSPVASKA--RGFVSGEMFNTKGELLVS-LTQEALL 417 (430)
Q Consensus 367 si~f~~~~~~~~W~l~~~~~~~~~~g--r~~~~~~i~~~~G~lvA~-~~Q~~l~ 417 (430)
.+.|++|+.+++-+.++.+......+ ....+++++ .+|++|++ +.=..++
T Consensus 100 ~~rF~~pV~pGd~l~~~~~v~~~~~~~g~~~~~~~~~-~~g~~v~~v~~~~~~~ 152 (154)
T 1z6b_A 100 GVRWKKPVLPGDTLTMQANLISFKSSLGIAKLSGVGY-VNGKVVINISEMTFAL 152 (154)
T ss_dssp EEEECSCCCTTCEEEEEEEEEEEETTTTEEEEEEEEE-ETTEEEEEEEEEEEEE
T ss_pred eeEEccccCCCCEEEEEEEEEEeeCCceEEEEEEEEE-ECCEEEEEeeEEEEEE
Confidence 58899999889999998888777664 478888885 79999998 6544433
No 265
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=57.81 E-value=5.5 Score=21.38 Aligned_cols=16 Identities=25% Similarity=0.619 Sum_probs=13.4
Q ss_pred EEEEEccCCCEEEEEe
Q 040957 397 SGEMFNTKGELLVSLT 412 (430)
Q Consensus 397 ~~~i~~~~G~lvA~~~ 412 (430)
...|||.+|++|+...
T Consensus 6 ss~IYD~~g~~i~~lg 21 (26)
T 2v2f_A 6 SSKIYDNKNQLIADLG 21 (26)
T ss_pred CCEEEeCCCCEeeecc
Confidence 4689999999999753
No 266
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=57.63 E-value=11 Score=31.33 Aligned_cols=53 Identities=11% Similarity=0.079 Sum_probs=36.0
Q ss_pred ceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeecc
Q 040957 31 VIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGH 88 (430)
Q Consensus 31 ~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe 88 (430)
+....+++|......-...+.+++|++|.+++. ....+++ ....+++||++--
T Consensus 43 ~~~~~l~pg~~~~pHh~~a~E~~yVl~G~~~v~--v~~~~~~---~~~~l~~GDv~~~ 95 (178)
T 1dgw_A 43 VLEYCSKPNTLLLPHHSDSDLLVLVLEGQAILV--LVNPDGR---DTYKLDQGDAIKI 95 (178)
T ss_dssp EEEEEECTTEEEEEEEESSEEEEEEEESEEEEE--EEETTEE---EEEEEETTEEEEE
T ss_pred EEEEEecCCcEecCcCCCCCEEEEEEeEEEEEE--EEeCCCc---EEEEECCCCEEEE
Confidence 345678888877655334579999999999998 4333332 2457888886643
No 267
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}
Probab=57.46 E-value=17 Score=36.72 Aligned_cols=61 Identities=18% Similarity=0.090 Sum_probs=46.5
Q ss_pred eeeecceeeeccCCCCCCCeEEeEEeecce----eCCeeeEEEEEEccCCCEEEEEeccceeccC
Q 040957 360 ASLSLDHSMWFHRSFRADDWLLFVIVSPVA----SKARGFVSGEMFNTKGELLVSLTQEALLRSP 420 (430)
Q Consensus 360 ~~~sld~si~f~~~~~~~~W~l~~~~~~~~----~~gr~~~~~~i~~~~G~lvA~~~Q~~l~r~~ 420 (430)
...=.++.|.||+|++..+=+..+.+...+ .+.....+.+++|++|++|++..+.-++|..
T Consensus 394 ~lvH~eq~i~~~rPl~~g~~l~~~~~v~~v~dk~~G~~v~~~~~~~d~~Ge~v~~~~~t~~~Rg~ 458 (613)
T 3oml_A 394 NILHGEQYLEIVDDLPTSGTLLTNGKVFDVMDKGSGAVVVTNSESFDESGRLLVRNQSTTFIVGA 458 (613)
T ss_dssp -CEEEEEEEEECSCCCSSEEEEEEEEEEEEEECSSCEEEEEEEEEECSSCCEEEEEEEEEEECC-
T ss_pred HccccceEEEEEcCCCCCCeEEEEEEEEEEEEcCCceEEEEEEEEECCCCCEEEEEEEEEEEecc
Confidence 356678899999998888776666654433 3344666788898999999999999999954
No 268
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=57.21 E-value=49 Score=24.91 Aligned_cols=70 Identities=14% Similarity=0.066 Sum_probs=39.9
Q ss_pred eEEEecCCCEEEeCCCcC-CeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEecceEEEEe
Q 040957 32 IVKRYGKGEYVVRDGDIG-EGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIALTELTCLVL 110 (430)
Q Consensus 32 ~~~~~~~ge~i~~~g~~~-~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~~~~~~l~i 110 (430)
....+++|..+-..-... ..+++|++|.+.+. .. +++ ...+.+||++=-. .+.++......-+++.++.+
T Consensus 42 ~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~--~~---~~~---~~~l~~Gd~~~i~-~~~~H~~~n~~~~~~~~l~v 112 (125)
T 3h8u_A 42 VVWHAHPGQEIASHVHPHGQDTWTVISGEAEYH--QG---NGI---VTHLKAGDIAIAK-PGQVHGAMNSGPEPFIFVSV 112 (125)
T ss_dssp EEEEECTTCEECCC-CTTCEEEEEEEECEEEEE--CS---TTC---EEEEETTEEEEEC-TTCCCEEEECSSSCEEEEEE
T ss_pred EEEEECCCCcCCcccCCCCeEEEEEEEeEEEEE--EC---CCe---EEEeCCCCEEEEC-CCCEEEeEeCCCCCEEEEEE
Confidence 345678887765444443 67889999999998 31 222 3578888865322 23333333222344555444
No 269
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=57.18 E-value=56 Score=24.10 Aligned_cols=67 Identities=16% Similarity=0.053 Sum_probs=41.6
Q ss_pred eEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEecceEEEEe
Q 040957 32 IVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIALTELTCLVL 110 (430)
Q Consensus 32 ~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~~~~~~l~i 110 (430)
....+++|..+-.--.....+++|++|.+.+. . ++ + ...+.+||++=-. .+.+ -.+.+.+++.++.+
T Consensus 37 ~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~--~---~~-~---~~~l~~Gd~~~ip-~~~~--H~~~~~~~~~~l~v 103 (116)
T 2pfw_A 37 VKIWFDKGAEGYVHAHRHSQVSYVVEGEFHVN--V---DG-V---IKVLTAGDSFFVP-PHVD--HGAVCPTGGILIDT 103 (116)
T ss_dssp EEEEECTTEEEEEECCSSEEEEEEEEECEEEE--E---TT-E---EEEECTTCEEEEC-TTCC--EEEEESSCEEEEEE
T ss_pred EEEEECCCCcCCcEECCcceEEEEEeeEEEEE--E---CC-E---EEEeCCCCEEEEC-cCCc--eeeEeCCCcEEEEE
Confidence 34567788765433344678999999999988 3 22 2 3578898875332 2222 23455557776666
No 270
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=56.92 E-value=22 Score=28.33 Aligned_cols=73 Identities=11% Similarity=0.031 Sum_probs=46.0
Q ss_pred ceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEecceEEEEe
Q 040957 31 VIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIALTELTCLVL 110 (430)
Q Consensus 31 ~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~~~~~~l~i 110 (430)
+...++++|..+-.-.......++|++|..+.. .+.. ..-..+++|+++=.- .+..+.. +.+.++|.++.+
T Consensus 46 ~~~~~~~pG~~~p~H~H~~~ee~~VL~G~~~~~------~g~~-~~~~~~~~Gd~~~~p-~g~~H~p-~~~~e~~~~l~~ 116 (145)
T 2o1q_A 46 TAIFDCPAGSSFAAHVHVGPGEYFLTKGKMDVR------GGKA-AGGDTAIAPGYGYES-ANARHDK-TEFPVASEFYMS 116 (145)
T ss_dssp EEEEEECTTEEECCEEESSCEEEEEEEEEEEET------TCGG-GTSEEEESSEEEEEC-TTCEESC-CEEEEEEEEEEE
T ss_pred EEEEEECCCCCCCccCCCCCEEEEEEEeEEEEc------CCCE-ecceEeCCCEEEEEC-cCCccCC-eECCCCeEEEEE
Confidence 456788899888766666778899999998844 2322 112467788877554 1222221 345677777766
Q ss_pred cc
Q 040957 111 PH 112 (430)
Q Consensus 111 ~~ 112 (430)
-.
T Consensus 117 ~~ 118 (145)
T 2o1q_A 117 FL 118 (145)
T ss_dssp EE
T ss_pred EC
Confidence 43
No 271
>2bi0_A Hypothetical protein RV0216; conserved hypothetical, hotdog-fold, structural proteomics in europe, spine, structural genomics; 1.9A {Mycobacterium tuberculosis} SCOP: d.38.1.4 d.38.1.4
Probab=54.14 E-value=36 Score=31.46 Aligned_cols=59 Identities=15% Similarity=0.071 Sum_probs=43.9
Q ss_pred ecce-eeeccCCCCCCCeEEeEEeeccee----------CCeeeEEEEEEccCCCEEEEEeccceeccCC
Q 040957 363 SLDH-SMWFHRSFRADDWLLFVIVSPVAS----------KARGFVSGEMFNTKGELLVSLTQEALLRSPK 421 (430)
Q Consensus 363 sld~-si~f~~~~~~~~W~l~~~~~~~~~----------~gr~~~~~~i~~~~G~lvA~~~Q~~l~r~~~ 421 (430)
++.. .+.|++|+.+++-+..+.+..... .|....+..+.|++|+.|+++.-..+++.+.
T Consensus 91 ~~g~~~~rF~~PV~~GDtl~~~~~V~~~~~~~sr~~~~~~g~v~~~~~~~nq~G~~V~~~~~~vl~~~r~ 160 (337)
T 2bi0_A 91 NLFYRGLRFHRFPAVGDTLYTRTEVVGLRANSPKPGRAPTGLAGLRMTTIDRTDRLVLDFYRCAMLPASP 160 (337)
T ss_dssp EEEEECEEBSSCCBTTCEEEEEEEEEEEEECCCCTTSCCEEEEEEEEEEECTTCCEEEEEEEEEEEECCT
T ss_pred eeeeeeEEEeCCccCCCEeEEEEEEEeEEeccccccCCCcEEEEEEEEEEeCCCCEEEEEEEEEEEecCC
Confidence 4443 389999999999988877653321 1344567778899999999999998888654
No 272
>3kh8_A MAOC-like dehydratase; hot DOG domain, lyase; 2.00A {Phytophthora capsici}
Probab=53.42 E-value=24 Score=32.64 Aligned_cols=61 Identities=13% Similarity=0.015 Sum_probs=45.6
Q ss_pred ceeeecceeeeccCCC-CCCCeEEeEEeeccee---CCee-eEEEEEEccCCCEEEEEeccceeccC
Q 040957 359 TASLSLDHSMWFHRSF-RADDWLLFVIVSPVAS---KARG-FVSGEMFNTKGELLVSLTQEALLRSP 420 (430)
Q Consensus 359 ~~~~sld~si~f~~~~-~~~~W~l~~~~~~~~~---~gr~-~~~~~i~~~~G~lvA~~~Q~~l~r~~ 420 (430)
....=.++.|.||+|+ +.++-+..+.+...+. .|.. ..+.+ .+++|++|++..|.-++|..
T Consensus 121 ~~lVHgeq~i~~~rPl~~~g~~l~~~s~v~~v~dk~~G~lv~v~~~-~~~~Gelv~~~~st~~~Rg~ 186 (332)
T 3kh8_A 121 AMILHGEQSVEILRPLDPSGGTLTGKTKVISFYDKGKGTLMETQTQ-FEDGNGPVAKLISGSFIRGL 186 (332)
T ss_dssp TSEEEEEEEEEESSCCCTTCEEEEEEEEEEEEEECSSEEEEEEEEE-EEETTEEEEEEEEEEEEESC
T ss_pred cceEEeccEEEEecCCCCCCCEEEEEEEEEEEEEcCCceEEEEEEE-EccCCeEEEEEEEEEEEEcC
Confidence 3467788999999999 8888777776665543 3333 33444 66899999999999999964
No 273
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=50.63 E-value=25 Score=28.38 Aligned_cols=68 Identities=15% Similarity=0.057 Sum_probs=37.6
Q ss_pred EEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEecceEEEEec
Q 040957 34 KRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIALTELTCLVLP 111 (430)
Q Consensus 34 ~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~~~~~~l~i~ 111 (430)
..+++|..+-..-.....+++|++|.+++. . +++ ...+.+||++=- -.+.++.......+++.+++|-
T Consensus 49 ~~l~pG~~~~~H~H~~~E~~~Vl~G~~~v~--v---~g~----~~~l~~Gd~i~i-p~~~~H~~~n~g~~~~~~l~i~ 116 (156)
T 3kgz_A 49 FEVDEGGYSTLERHAHVHAVMIHRGHGQCL--V---GET----ISDVAQGDLVFI-PPMTWHQFRANRGDCLGFLCVV 116 (156)
T ss_dssp EEEEEEEECCCBBCSSCEEEEEEEEEEEEE--E---TTE----EEEEETTCEEEE-CTTCCEEEECCSSSCEEEEEEE
T ss_pred EEECCCCccCceeCCCcEEEEEEeCEEEEE--E---CCE----EEEeCCCCEEEE-CCCCcEEeEeCCCCCEEEEEEE
Confidence 345565554333334567899999999998 3 222 357888886632 2233333332233455555443
No 274
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=50.00 E-value=32 Score=25.21 Aligned_cols=47 Identities=11% Similarity=0.050 Sum_probs=32.7
Q ss_pred eEEEecCCCEEEeC--CCc-CCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeec
Q 040957 32 IVKRYGKGEYVVRD--GDI-GEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFG 87 (430)
Q Consensus 32 ~~~~~~~ge~i~~~--g~~-~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fG 87 (430)
....+++|..+-.. -.. ...+++|++|.+.+. . ++ + ...+.+||++=
T Consensus 24 ~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~--~---~~-~---~~~l~~Gd~~~ 73 (113)
T 2gu9_A 24 AEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAI--V---DG-H---TQALQAGSLIA 73 (113)
T ss_dssp EEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEE--E---TT-E---EEEECTTEEEE
T ss_pred EEEEECCCCccCCcccccCCCcEEEEEEeCEEEEE--E---CC-E---EEEeCCCCEEE
Confidence 34577888876544 344 678999999999988 3 22 2 35688888663
No 275
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=49.92 E-value=57 Score=23.16 Aligned_cols=46 Identities=24% Similarity=0.133 Sum_probs=30.8
Q ss_pred EEEecCCCEEEeCCCcC-CeEEEEEeeEEEEEEecccccccCCcceEEeccCCeec
Q 040957 33 VKRYGKGEYVVRDGDIG-EGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFG 87 (430)
Q Consensus 33 ~~~~~~ge~i~~~g~~~-~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fG 87 (430)
...+++|..+-..-... ..+++|++|.+.+. .. + + ...+.+||++=
T Consensus 32 ~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~--~~---~-~---~~~l~~Gd~~~ 78 (105)
T 1v70_A 32 LYALLPGQAQKVHVHEGSDKVYYALEGEVVVR--VG---E-E---EALLAPGMAAF 78 (105)
T ss_dssp EEEECTTCEEEEECCSSCEEEEEEEESCEEEE--ET---T-E---EEEECTTCEEE
T ss_pred EEEECCCCcCCccCCCCCcEEEEEEeCEEEEE--EC---C-E---EEEeCCCCEEE
Confidence 45678887764433333 56999999999988 32 2 2 35688888663
No 276
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=49.50 E-value=43 Score=24.62 Aligned_cols=59 Identities=15% Similarity=0.178 Sum_probs=37.7
Q ss_pred CHHHHHHHHh-hceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeecc
Q 040957 20 PGSSLKRIAD-IVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGH 88 (430)
Q Consensus 20 ~~~~~~~l~~-~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe 88 (430)
...++...-. .+....+.+|..-.. .....+++|++|.+.+. . ++++ ...+.+||.+--
T Consensus 21 ~~~~l~~~g~~~~~~~~~~pg~~~~h--H~~~E~~~Vl~G~~~~~--i---~~g~---~~~l~~GD~i~i 80 (101)
T 1o5u_A 21 TPEKLKELSVEKWPIWEKEVSEFDWY--YDTNETCYILEGKVEVT--T---EDGK---KYVIEKGDLVTF 80 (101)
T ss_dssp CHHHHHHHTGGGSCEEEECSEEEEEE--CSSCEEEEEEEEEEEEE--E---TTCC---EEEEETTCEEEE
T ss_pred CccEEeeCCceEEEEEEeCCCccccc--CCceEEEEEEeCEEEEE--E---CCCC---EEEECCCCEEEE
Confidence 3444444332 244677888876554 44678999999999998 3 2122 357889986643
No 277
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=49.41 E-value=31 Score=26.07 Aligned_cols=47 Identities=17% Similarity=0.027 Sum_probs=33.2
Q ss_pred eEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeec
Q 040957 32 IVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFG 87 (430)
Q Consensus 32 ~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fG 87 (430)
....+++|..+-..-.....+++|++|.+.+. . ++ + ...+.+|+++=
T Consensus 44 ~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~~~--~---~~-~---~~~l~~Gd~~~ 90 (126)
T 4e2g_A 44 NWVRIEPNTEMPAHEHPHEQAGVMLEGTLELT--I---GE-E---TRVLRPGMAYT 90 (126)
T ss_dssp EEEEECTTCEEEEECCSSEEEEEEEEECEEEE--E---TT-E---EEEECTTEEEE
T ss_pred EEEEECCCCcCCCccCCCceEEEEEEeEEEEE--E---CC-E---EEEeCCCCEEE
Confidence 34567888877555555678999999999998 3 22 2 25788888653
No 278
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=49.19 E-value=69 Score=27.38 Aligned_cols=66 Identities=18% Similarity=0.207 Sum_probs=43.5
Q ss_pred EEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEE-ecceEEEEe
Q 040957 33 VKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIA-LTELTCLVL 110 (430)
Q Consensus 33 ~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A-~~~~~~l~i 110 (430)
...+++|+.+-..-.+...+++|++|.+++. . +++ ...+.+||++=-. .+.+ -.+.+ .+++.++.+
T Consensus 157 ~~~~~~G~~~~~H~H~~~e~~~Vl~G~~~~~--i---~g~----~~~l~~Gd~i~ip-~~~~--H~~~~~~~~~~~ll~ 223 (227)
T 3rns_A 157 IMSFWKGESLDPHKAPGDALVTVLDGEGKYY--V---DGK----PFIVKKGESAVLP-ANIP--HAVEAETENFKMLLI 223 (227)
T ss_dssp EEEECTTCEEEEECCSSEEEEEEEEEEEEEE--E---TTE----EEEEETTEEEEEC-TTSC--EEEECCSSCEEEEEE
T ss_pred EEEECCCCccCCEECCCcEEEEEEeEEEEEE--E---CCE----EEEECCCCEEEEC-CCCc--EEEEeCCCCEEEEEE
Confidence 4677888887655556778999999999998 3 222 3578888865332 2223 34555 677766554
No 279
>1tbu_A Peroxisomal acyl-coenzyme A thioester hydrolase 1; yeast peroxisomal thioesterase, , domain swapping, iodine SOAK, siras; 2.20A {Saccharomyces cerevisiae} SCOP: d.38.1.3
Probab=49.02 E-value=39 Score=25.88 Aligned_cols=45 Identities=4% Similarity=0.039 Sum_probs=33.2
Q ss_pred eeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEE
Q 040957 366 HSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSL 411 (430)
Q Consensus 366 ~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~ 411 (430)
.+.||.+|.+++..+.|+.+..+-+...+.-+++.+ ++|+.+.++
T Consensus 66 lh~~Fl~pg~~~~Pi~~~Ve~lRdGrsfstr~V~a~-Q~g~~i~~~ 110 (118)
T 1tbu_A 66 LHSYFIKGGDPRTKITYHVQNLRNGRNFIHKQVSAY-QHDKLIFTS 110 (118)
T ss_dssp EEEEECSCCCTTSCCEEEEEEEEECSSEEEEEEEEE-ETTEEEEEE
T ss_pred EEEEecCCCCCCCCEEEEEEEEECCCcEEEEEEEEE-ECCEEEEEE
Confidence 467898888888888888877766666666666776 688776544
No 280
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=47.86 E-value=88 Score=38.05 Aligned_cols=79 Identities=16% Similarity=0.034 Sum_probs=58.5
Q ss_pred CceeehhHHHHHHHHHHhccCC---CCCcceeeeeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEECCeeEEEEEEe
Q 040957 161 FGKVFGGQLVGQALAAASKTVD---CLKIVHSLHCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKGNIIFTLLAS 237 (430)
Q Consensus 161 ~~~~~GG~~~a~al~Aa~~~~~---~~~~~~s~~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~g~~~~~~~~s 237 (430)
+.-+||=+.+|++..+...... +.....+..+.|.+|+.++..+.++++.+..-..-....+++.|+|+.++.+++.
T Consensus 1263 ~~IaHGm~t~al~~~~~~~~~~~~g~~~~~~~~~~rF~~PV~~Gdtl~~~~~~~g~~~G~v~~~vta~q~Ge~Vl~g~A~ 1342 (3089)
T 3zen_D 1263 GPIVHGMWLSAAAQHVVTATDGKPVPPAKLIGWTARFLGMVKPGDQVDFRVDRVGIDVGAEVLEVSARIGSELVMAATAR 1342 (3089)
T ss_dssp SSCCCHHHHHHHHHHHHHHTTSTTCCTTTEEEEEEEECSCCCSSCEEEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEE
T ss_pred CccccChHHHHHHHHHHHHHhcccCCcceeEEEEEEEeeeeecCcchhhhcccccccCCceEEEEEeccccccccccccc
Confidence 4578998999988877776543 2345778899999999998888888876543222445677777999998888765
Q ss_pred cc
Q 040957 238 FQ 239 (430)
Q Consensus 238 f~ 239 (430)
-.
T Consensus 1343 v~ 1344 (3089)
T 3zen_D 1343 LA 1344 (3089)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 281
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=47.19 E-value=65 Score=26.08 Aligned_cols=70 Identities=17% Similarity=0.147 Sum_probs=41.1
Q ss_pred EEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEE-ecceEEEEec
Q 040957 33 VKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIA-LTELTCLVLP 111 (430)
Q Consensus 33 ~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A-~~~~~~l~i~ 111 (430)
...+++|..+-..-.....+++|++|.+.+. .. + + ...+.+||++=- -.+.++...... -+++.++.|-
T Consensus 60 ~~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~--i~---~-~---~~~l~~Gd~i~i-p~~~~H~~~n~~~~~~~~~l~i~ 129 (167)
T 3ibm_A 60 YFEVEPGGYTTLERHEHTHVVMVVRGHAEVV--LD---D-R---VEPLTPLDCVYI-APHAWHQIHATGANEPLGFLCIV 129 (167)
T ss_dssp EEEECTTCBCCCBBCSSCEEEEEEESEEEEE--ET---T-E---EEEECTTCEEEE-CTTCCEEEEEESSSCCEEEEEEE
T ss_pred EEEECCCCCCCCccCCCcEEEEEEeCEEEEE--EC---C-E---EEEECCCCEEEE-CCCCcEEEEeCCCCCCEEEEEEE
Confidence 3456666654433344678999999999988 32 2 2 357889887633 223344333333 4456666554
Q ss_pred c
Q 040957 112 H 112 (430)
Q Consensus 112 ~ 112 (430)
.
T Consensus 130 ~ 130 (167)
T 3ibm_A 130 D 130 (167)
T ss_dssp E
T ss_pred e
Confidence 3
No 282
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=46.51 E-value=44 Score=25.77 Aligned_cols=45 Identities=22% Similarity=0.217 Sum_probs=30.2
Q ss_pred EEEecCCCEEEeCCCc-CCeEEEEEeeEEEEEEecccccccCCcceEEeccCCee
Q 040957 33 VKRYGKGEYVVRDGDI-GEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYF 86 (430)
Q Consensus 33 ~~~~~~ge~i~~~g~~-~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~f 86 (430)
...+++|..+-.--.. ...+++|++|.+.+. . ++ + ...+.+||++
T Consensus 61 ~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~--i---~~-~---~~~l~~Gd~i 106 (133)
T 1o4t_A 61 RMKLPPGSSVGLHKHEGEFEIYYILLGEGVFH--D---NG-K---DVPIKAGDVC 106 (133)
T ss_dssp EEEECTTCEEEEEECCSEEEEEEEEESEEEEE--E---TT-E---EEEEETTEEE
T ss_pred EEEECCCCccCceECCCccEEEEEEeCEEEEE--E---CC-E---EEEeCCCcEE
Confidence 4567888766432233 367999999999988 2 22 2 3568888866
No 283
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=46.15 E-value=35 Score=33.52 Aligned_cols=61 Identities=7% Similarity=-0.009 Sum_probs=43.2
Q ss_pred HHHHhhceEEEecCCCEEEeCC-CcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeecc
Q 040957 25 KRIADIVIVKRYGKGEYVVRDG-DIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGH 88 (430)
Q Consensus 25 ~~l~~~~~~~~~~~ge~i~~~g-~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe 88 (430)
..|--.+....+.+|-++-.-= -.+..+++|++|.+++. ..+.+|.. .....+.+||+|=-
T Consensus 390 ~~LgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~--~V~~~G~~-v~~~~L~~GDV~v~ 451 (531)
T 3fz3_A 390 RFLRLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQ--VVNENGDA-ILDQEVQQGQLFIV 451 (531)
T ss_dssp HHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEE--EECTTSCE-EEEEEEETTCEEEE
T ss_pred ccCceeEEEEEeecCccccceEcCCCCEEEEEEeCcEEEE--EEeCCCcE-EEEEEecCCeEEEE
Confidence 3333345567889998875432 23678999999999998 55555554 55678999998744
No 284
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=45.83 E-value=35 Score=33.39 Aligned_cols=80 Identities=8% Similarity=-0.002 Sum_probs=48.0
Q ss_pred HHHhhceEEEecCCCEEEeCCCc-CCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEe-c
Q 040957 26 RIADIVIVKRYGKGEYVVRDGDI-GEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIAL-T 103 (430)
Q Consensus 26 ~l~~~~~~~~~~~ge~i~~~g~~-~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~-~ 103 (430)
.+--.+....+.+|..+-.-=.+ ...+++|++|.+++. ..+.+|.+ .....+.+||+|=-. .+.++. +.+. +
T Consensus 364 ~lgls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~--v~~~~g~~-~~~~~l~~GDv~vvP-~G~~H~--~~n~~e 437 (493)
T 2d5f_A 364 QFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVR--VVNAQGNA-VFDGELRRGQLLVVP-QNFVVA--EQGGEQ 437 (493)
T ss_dssp HHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEE--EECTTSCE-EEEEEEETTCEEEEC-TTCEEE--EEEEEE
T ss_pred ccceEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEE--EEcCCCCE-EEeEEEcCCCEEEEC-CCCeEe--eeeCCC
Confidence 33334556788888876543333 578999999999998 54444443 333569999987543 222222 2222 3
Q ss_pred ceEEEEec
Q 040957 104 ELTCLVLP 111 (430)
Q Consensus 104 ~~~~l~i~ 111 (430)
++.++.+-
T Consensus 438 ~~~~l~~~ 445 (493)
T 2d5f_A 438 GLEYVVFK 445 (493)
T ss_dssp EEEEEEEE
T ss_pred CEEEEEEE
Confidence 46666663
No 285
>3k67_A Putative dehydratase AF1124; hypothetical protein AF1124, structural genomics, PSI, protein structure initiative; 1.25A {Archaeoglobus fulgidus} PDB: 2b3m_A
Probab=45.60 E-value=64 Score=26.01 Aligned_cols=52 Identities=13% Similarity=0.129 Sum_probs=42.0
Q ss_pred ecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEeccc
Q 040957 363 SLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEA 415 (430)
Q Consensus 363 sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~Q~~ 415 (430)
-+..++.|.+|+.+++=+..+.+......++...+.+..+.| +.|+++.-+-
T Consensus 105 ~~~~~~rF~~PV~~GDtl~~~~~V~~~~~~~~~~~~~~~~~d-~vV~~G~a~V 156 (159)
T 3k67_A 105 LLEQSFRYTSPVRIGDVVRVEGVVSGVEKNRYTIDVKCYTGD-KVVAEGVVKV 156 (159)
T ss_dssp EEEEEEEECSCCCTTCEEEEEEEEEEEETTEEEEEEEEEETT-EEEEEEEEEE
T ss_pred eeeeeeEEcCCcCCCCEEEEEEEEEEEECCEEEEEEEEEECC-EEEEEEEEEE
Confidence 345688999999999999999998888999999999998875 4676655433
No 286
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=45.24 E-value=32 Score=33.78 Aligned_cols=60 Identities=10% Similarity=0.003 Sum_probs=40.4
Q ss_pred HHHhhceEEEecCCCEEEeCCCc-CCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeecc
Q 040957 26 RIADIVIVKRYGKGEYVVRDGDI-GEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGH 88 (430)
Q Consensus 26 ~l~~~~~~~~~~~ge~i~~~g~~-~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe 88 (430)
.+--.+....+++|.++-.-=.+ ...+++|++|.+++. ..+.+|.+ .....+.+||+|=-
T Consensus 369 ~l~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~--vv~~~G~~-~~~~~l~~GDv~vi 429 (510)
T 3c3v_A 369 WLGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQ--VVDSNGNR-VYDEELQEGHVLVV 429 (510)
T ss_dssp HHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEE--EECTTSCE-EEEEEEETTCEEEE
T ss_pred cceEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEE--EEeCCCCE-EEeEEEcCCcEEEE
Confidence 33334556788888876543333 578999999999998 55445544 44456899987743
No 287
>3esi_A Uncharacterized protein; protein from erwinia carotovora subsp. atroseptica (pectobacterium atrosepticum), structural genomics; 2.50A {Pectobacterium atrosepticum}
Probab=45.05 E-value=77 Score=24.62 Aligned_cols=49 Identities=4% Similarity=-0.181 Sum_probs=33.3
Q ss_pred eeeeccCcCCCCCeEEEEEEeeeCCCeeEEEEEEEECCe--eEEEEEEeccc
Q 040957 191 HCYFLLVGDLNIPIIYQVHRVRDGNSFATRRVDAIQKGN--IIFTLLASFQK 240 (430)
Q Consensus 191 ~~~Fl~~~~~~~pi~~~V~~lr~Gr~~s~~~V~~~Q~g~--~~~~~~~sf~~ 240 (430)
.+.|.++..|+..++++++..+..+.+..+--. ...+. .+.+..+.|..
T Consensus 71 ~vkF~~~V~PGD~l~l~v~~~~~~~~l~F~~~~-~~~~~~~~~ssG~i~l~~ 121 (129)
T 3esi_A 71 NIKFQQPILPGKTLRLVLIWHAGKQSLTFSYSI-LEGDTERTASSGKIKLTP 121 (129)
T ss_dssp EEEECSCCCTTCEEEEEEEEETTTTEEEEEEEE-EETTEEEEEEEEEEEEEE
T ss_pred eeEECcccCCCCEEEEEEEEEecCCcEEEEEEe-CCccceeeecCccEEEEE
Confidence 688999999999999999999988776554222 11111 44555555543
No 288
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=44.93 E-value=54 Score=25.88 Aligned_cols=61 Identities=5% Similarity=-0.037 Sum_probs=37.7
Q ss_pred CcCCeEEEEEeeEEEEEEecccc--cccCCcceEEeccCCeeccCCCCCcceeeEEEecceEEEEeccc
Q 040957 47 DIGEGIYFIWEGEAEVSVSDSVQ--AEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIALTELTCLVLPHE 113 (430)
Q Consensus 47 ~~~~~ly~I~~G~v~~~~~~~~~--~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~~~~~~l~i~~~ 113 (430)
+..+.+|+|++|.+.+. ..+. ++.+ .-.-.+++|+++-=. ..-..+-.|.++|.++.|...
T Consensus 48 ~~tDE~Fivl~G~l~i~--~rd~~~~~~~-d~~V~l~~Ge~yvVP---kGveH~p~a~~e~~vLLiEp~ 110 (140)
T 3d0j_A 48 HSTDEQFILSAGKAILI--TAEKENDKFN-IELTLMEKGKVYNVP---AECWFYSITQKDTKMMYVQDS 110 (140)
T ss_dssp SSCCEEEEEEESCEEEE--EEEEETTEEE-EEEEECCTTCCEEEC---TTCEEEEEECTTCEEEEEEES
T ss_pred CCCCeEEEEEecEEEEE--EecCcCCCCc-cceEEecCCCEEEeC---CCccCcccCCCceEEEEEEeC
Confidence 44689999999999998 3311 1111 123457888766442 111234566788998888765
No 289
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=44.79 E-value=23 Score=27.07 Aligned_cols=46 Identities=17% Similarity=0.123 Sum_probs=30.6
Q ss_pred EecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccC
Q 040957 35 RYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHG 89 (430)
Q Consensus 35 ~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~ 89 (430)
...+|..-+... ..+.++.|++|.+.+. .. +|. ...+++||.|---
T Consensus 48 e~tPG~~~~~~~-~~~E~~~iLeG~~~lt--~d--dG~----~~~l~aGD~~~~P 93 (116)
T 3es4_A 48 MAEPGIYNYAGR-DLEETFVVVEGEALYS--QA--DAD----PVKIGPGSIVSIA 93 (116)
T ss_dssp EECSEEEEECCC-SEEEEEEEEECCEEEE--ET--TCC----CEEECTTEEEEEC
T ss_pred ecCCceeECeeC-CCcEEEEEEEeEEEEE--eC--CCe----EEEECCCCEEEEC
Confidence 556666555443 3358999999999998 22 333 3578899877553
No 290
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=43.92 E-value=34 Score=33.36 Aligned_cols=55 Identities=13% Similarity=0.038 Sum_probs=37.6
Q ss_pred ceEEEecCCCEEEeCCCc-CCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeecc
Q 040957 31 VIVKRYGKGEYVVRDGDI-GEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGH 88 (430)
Q Consensus 31 ~~~~~~~~ge~i~~~g~~-~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe 88 (430)
+....+++|.++-.-=.+ ...+++|++|.+++. ..+.+|.+ .....+.+||+|=-
T Consensus 340 ~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~--v~~~~G~~-~~~~~l~~GDv~vi 395 (476)
T 1fxz_A 340 AEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQ--VVNCNGER-VFDGELQEGRVLIV 395 (476)
T ss_dssp EEEEEECTTCEEEEEEETTCCEEEEEEESEEEEE--EECTTSCE-EEEEEEETTCEEEE
T ss_pred EEEEEecCCceecceECCCCCEEEEEEeCEEEEE--EEecCCCE-EeeeEEcCCCEEEE
Confidence 445677888866543333 578999999999998 55445544 34456899987744
No 291
>3q62_A 3-hydroxydecanoyl-[acyl-carrier-protein] dehydrat; structural genomics, center for structural genomics of infec diseases, csgid; HET: MES; 1.40A {Yersinia pseudotuberculosis} SCOP: d.38.1.2 PDB: 1mka_A* 1mkb_A
Probab=43.84 E-value=52 Score=27.11 Aligned_cols=57 Identities=16% Similarity=0.190 Sum_probs=42.0
Q ss_pred eeecceeeeccCCCCCCCe-EEeEEeecce---eCCeeeEEEEEEccCCCEEEEEeccceecc
Q 040957 361 SLSLDHSMWFHRSFRADDW-LLFVIVSPVA---SKARGFVSGEMFNTKGELLVSLTQEALLRS 419 (430)
Q Consensus 361 ~~sld~si~f~~~~~~~~W-~l~~~~~~~~---~~gr~~~~~~i~~~~G~lvA~~~Q~~l~r~ 419 (430)
..+++ .+.|+.++.+.+= +.++.+.... ..+.+..+++++ -||++||++...++--.
T Consensus 109 l~gi~-~~kF~~~V~PGd~~L~l~v~i~~~~~~~~~~~~~~~~~~-vdg~~vaea~~l~v~l~ 169 (175)
T 3q62_A 109 ALGVG-EVKFTGQVLPDAKKVTYRINFKRVIMRKLIMGVADGEVL-VDGKVIYTATDLKVGLF 169 (175)
T ss_dssp EEEES-CEEECCCCCTTCCEEEEEEEEEEEEC--CCEEEEEEEEE-ETTEEEEEEEEEEEEEE
T ss_pred Eeeee-EEEEcccccCCCEEEEEEEEEEEEeccCCCEEEEEEEEE-ECCEEEEEEEeeEEEEe
Confidence 44554 4789888777776 6788777664 567788999998 79999999987665443
No 292
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=43.19 E-value=30 Score=26.65 Aligned_cols=46 Identities=22% Similarity=0.142 Sum_probs=29.6
Q ss_pred EEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeecc
Q 040957 34 KRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGH 88 (430)
Q Consensus 34 ~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe 88 (430)
-...+|..-....+ .+.+++|++|.+.+. .. + ++ ...+++||.+--
T Consensus 54 w~~~pG~~~~~~~~-~~E~~~Vl~G~~~l~--~~--~-g~---~~~l~~GD~~~i 99 (123)
T 3bcw_A 54 WESTSGSFQSNTTG-YIEYCHIIEGEARLV--DP--D-GT---VHAVKAGDAFIM 99 (123)
T ss_dssp EEEEEEEEECCCTT-EEEEEEEEEEEEEEE--CT--T-CC---EEEEETTCEEEE
T ss_pred EEECCCceeeEcCC-CcEEEEEEEEEEEEE--EC--C-Ce---EEEECCCCEEEE
Confidence 34455655443322 378999999999999 31 2 22 256899987754
No 293
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=42.11 E-value=30 Score=28.20 Aligned_cols=68 Identities=15% Similarity=0.030 Sum_probs=37.2
Q ss_pred EEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEecceEEEEec
Q 040957 34 KRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIALTELTCLVLP 111 (430)
Q Consensus 34 ~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~~~~~~l~i~ 111 (430)
..+++|..+-..-.....+++|++|.+.+. . +++ ...+.+||++=-. .+.++.......+++.++++-
T Consensus 58 ~~l~pG~~~~~H~H~~~E~~~Vl~G~~~~~--v---~g~----~~~l~~GD~i~ip-~g~~H~~~n~~~~~~~~l~i~ 125 (166)
T 3jzv_A 58 FEVGPGGHSTLERHQHAHGVMILKGRGHAM--V---GRA----VSAVAPYDLVTIP-GWSWHQFRAPADEALGFLCMV 125 (166)
T ss_dssp EEEEEEEECCCBBCSSCEEEEEEEECEEEE--E---TTE----EEEECTTCEEEEC-TTCCEEEECCTTSCEEEEEEE
T ss_pred EEECCCCccCceeCCCcEEEEEEeCEEEEE--E---CCE----EEEeCCCCEEEEC-CCCcEEeEeCCCCCEEEEEEE
Confidence 345555544333334567899999999988 3 222 3578888866332 223333322233445555543
No 294
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=41.70 E-value=70 Score=24.21 Aligned_cols=46 Identities=17% Similarity=0.133 Sum_probs=29.4
Q ss_pred EEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeec
Q 040957 33 VKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFG 87 (430)
Q Consensus 33 ~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fG 87 (430)
...+++|..+-.--.....+++|++|.+.+. .. ++ ...+.+||++=
T Consensus 52 ~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~--i~----~~---~~~l~~Gd~i~ 97 (126)
T 1vj2_A 52 LFTVEPGGLIDRHSHPWEHEIFVLKGKLTVL--KE----QG---EETVEEGFYIF 97 (126)
T ss_dssp EEEEEEEEEEEEECCSSCEEEEEEESEEEEE--CS----SC---EEEEETTEEEE
T ss_pred EEEECCCCcCCceeCCCcEEEEEEEeEEEEE--EC----CE---EEEECCCCEEE
Confidence 3455666554333334678999999999988 32 22 25678887653
No 295
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=41.70 E-value=95 Score=24.33 Aligned_cols=71 Identities=15% Similarity=0.156 Sum_probs=41.3
Q ss_pred EEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEecceEEEEecc
Q 040957 33 VKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIALTELTCLVLPH 112 (430)
Q Consensus 33 ~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~~~~~~l~i~~ 112 (430)
...+++|..+-..-.....+++|++|.+.+. .. ++ ....+.+||++--. .+.++.......+++.++.+..
T Consensus 52 ~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~--~~----~~--~~~~l~~Gd~i~ip-~~~~H~~~n~~~~~~~~l~v~~ 122 (147)
T 2f4p_A 52 DVVFEPGARTHWHSHPGGQILIVTRGKGFYQ--ER----GK--PARILKKGDVVEIP-PNVVHWHGAAPDEELVHIGIST 122 (147)
T ss_dssp EEEECTTCEECSEECTTCEEEEEEEEEEEEE--ET----TS--CCEEEETTCEEEEC-TTCCEEEEEBTTBCEEEEEEEC
T ss_pred EEEECCCCccCceECCCceEEEEEeCEEEEE--EC----CE--EEEEECCCCEEEEC-CCCcEEeEeCCCCCEEEEEEEc
Confidence 4566777765433334478999999999988 32 22 12468898876432 2334433333334566665543
No 296
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=41.06 E-value=60 Score=27.22 Aligned_cols=55 Identities=11% Similarity=-0.055 Sum_probs=35.4
Q ss_pred ceEEEecCCCEEEeCCCc-CCeEEEEEeeEEEEEEeccccc--ccCCcceEEeccCCeecc
Q 040957 31 VIVKRYGKGEYVVRDGDI-GEGIYFIWEGEAEVSVSDSVQA--EEEDRPEFQLKRYDYFGH 88 (430)
Q Consensus 31 ~~~~~~~~ge~i~~~g~~-~~~ly~I~~G~v~~~~~~~~~~--g~~~~~~~~~~~G~~fGe 88 (430)
+....+.+|..+-.--.+ ...+++|++|.+++. ..+.+ +++ .....+.+||+|--
T Consensus 74 ~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~v~--~~~~~~~~~~-~~~~~l~~GD~~~i 131 (201)
T 1fi2_A 74 MNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVG--ILGSLDSGNK-LYSRVVRAGETFVI 131 (201)
T ss_dssp EEEEEECTTCEEEEEECTTCCEEEEEEESEEEEE--EECCGGGTTC-EEEEEEETTCEEEE
T ss_pred EEEEEECCCCCCCCeECCCCCEEEEEEeCEEEEE--EEcCCCCCCe-EEEEEECCCCEEEE
Confidence 345677888866443333 579999999999987 33211 122 33567899987643
No 297
>3lmb_A Uncharacterized protein; protein OLEI01261, unknown function, chlorobaculum tepidum T structural genomics, PSI2, MCSG; HET: MSE; 2.10A {Oleispira antarctica rb-8} SCOP: d.38.1.0
Probab=40.94 E-value=31 Score=28.22 Aligned_cols=76 Identities=11% Similarity=0.088 Sum_probs=45.3
Q ss_pred HHHHHHHHhhhhhhh---hhcccCccCCCcceeeecceeeeccCCCCCCCeEEeEEeec-------------ceeCCeee
Q 040957 332 HRCVVAFASDLIFSS---VSLNPHRRKGFRTASLSLDHSMWFHRSFRADDWLLFVIVSP-------------VASKARGF 395 (430)
Q Consensus 332 ~~~~la~~sD~~~~~---~~~~~~~~~~~~~~~~sld~si~f~~~~~~~~W~l~~~~~~-------------~~~~gr~~ 395 (430)
|-.++.-++|..... ..++.. +.....+..+-+|.|.+|...+ +..+++.+ ..+..+..
T Consensus 57 fGGslfslad~a~~~~~~l~~~~~---g~~~~vv~~~~~I~yl~P~~~~--~~a~~~~~~~~~~~~i~~~l~~~gK~~~~ 131 (165)
T 3lmb_A 57 FGGSLYNAAVMACWGMVYLKTQEE---NIACNQVVTEGNMKYIAPVYGR--IRAICHAPDEEELANFFDHFERKGKARIS 131 (165)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHT---TCCCEEEEEEEEEEECSCCCSC--EEEEEECCCHHHHHHHHHHHHHHSEEEEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhc---CCCCeEEEEEeEEEEccCccCC--eEEEEEeCcHHHHHHHHHHHHhCCceEEE
Confidence 444555566742211 223222 2223456678899999987765 34444432 33445556
Q ss_pred EEEEEEccC--------CCEEEEEe
Q 040957 396 VSGEMFNTK--------GELLVSLT 412 (430)
Q Consensus 396 ~~~~i~~~~--------G~lvA~~~ 412 (430)
.++.|+|.+ |+++|...
T Consensus 132 l~v~I~d~~~~~~~~~~~~~~a~~~ 156 (165)
T 3lmb_A 132 LEAAIYNDACVMKIEPETKPSVKFN 156 (165)
T ss_dssp EEEEEESCTTCCSCCTTSCCSEEEE
T ss_pred EEEEEEeCCccccccccceEEEEEE
Confidence 788999998 88888775
No 298
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=40.41 E-value=50 Score=27.35 Aligned_cols=69 Identities=14% Similarity=0.070 Sum_probs=38.9
Q ss_pred EEecCCCEEE---eCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEe---cceEE
Q 040957 34 KRYGKGEYVV---RDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIAL---TELTC 107 (430)
Q Consensus 34 ~~~~~ge~i~---~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~---~~~~~ 107 (430)
..+++|...- ..-.....+++|++|.+.+. .. +++. .....+.+||++--. .+.++. +.+. +++.+
T Consensus 122 ~~~~pg~~~~~~~~h~h~~~E~~~Vl~G~~~~~--~~--~~~~-~~~~~l~~GD~~~~~-~~~~H~--~~n~~~~~~~~~ 193 (198)
T 2bnm_A 122 VDVLTDNPDDAKFNSGHAGNEFLFVLEGEIHMK--WG--DKEN-PKEALLPTGASMFVE-EHVPHA--FTAAKGTGSAKL 193 (198)
T ss_dssp EEECCCCGGGCCCCCCCSSCEEEEEEESCEEEE--ES--CTTS-CEEEEECTTCEEEEC-TTCCEE--EEESTTSCCEEE
T ss_pred EEEcCCCCCcccccccCCCeEEEEEEeeeEEEE--EC--CcCC-cccEEECCCCEEEeC-CCCceE--EEecCCCCCeEE
Confidence 3556665433 12234468999999999998 32 2111 234679999876332 223333 3333 45666
Q ss_pred EEe
Q 040957 108 LVL 110 (430)
Q Consensus 108 l~i 110 (430)
+.+
T Consensus 194 l~v 196 (198)
T 2bnm_A 194 IAV 196 (198)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 299
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=39.16 E-value=1e+02 Score=21.81 Aligned_cols=51 Identities=10% Similarity=0.261 Sum_probs=32.4
Q ss_pred CeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEecceEEEEecc
Q 040957 50 EGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIALTELTCLVLPH 112 (430)
Q Consensus 50 ~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~~~~~~l~i~~ 112 (430)
..+++|++|.+.+. .. + + ...+.+||++--. .+.++. +.+.+++.++.|+.
T Consensus 51 ~e~~~v~~G~~~~~--~~---~-~---~~~l~~Gd~~~ip-~~~~H~--~~~~~~~~~l~i~~ 101 (102)
T 3d82_A 51 DEVFIVMEGTLQIA--FR---D-Q---NITLQAGEMYVIP-KGVEHK--PMAKEECKIMIIEP 101 (102)
T ss_dssp CEEEEEEESEEEEE--CS---S-C---EEEEETTEEEEEC-TTCCBE--EEEEEEEEEEEEEE
T ss_pred cEEEEEEeCEEEEE--EC---C-E---EEEEcCCCEEEEC-CCCeEe--eEcCCCCEEEEEEc
Confidence 78999999999988 32 2 2 3567888865332 223333 33346788877753
No 300
>3rqb_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta sandwich; HET: MSE; 2.80A {Alicyclobacillus acidocaldarius subsp}
Probab=38.80 E-value=61 Score=28.80 Aligned_cols=48 Identities=15% Similarity=0.204 Sum_probs=37.4
Q ss_pred ecceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEe
Q 040957 363 SLDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLT 412 (430)
Q Consensus 363 sld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~ 412 (430)
..+.+++|.++.+. +-+.++++..+.+......+++++ ++|+.+++++
T Consensus 62 ~~sl~~~fl~~~~~-~p~~~~v~~~R~Grs~~~~~v~~~-Q~g~~~~~~~ 109 (275)
T 3rqb_A 62 PLALTVNFAAPAKV-APFVIEAVPVRTNRSTQHFTLTMM-QDGEVVTTAT 109 (275)
T ss_dssp EEEEEEEESSCCCS-SEEEEEEEEEEECSSEEEEEEEEE-ETTEEEEEEE
T ss_pred eEEEEEEeeCCCCC-CCEEEEEEEEEcCCCEEEEEEEEE-ECCEEEEEEE
Confidence 45678899987776 578888888777777778888888 6888887664
No 301
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=38.64 E-value=1.2e+02 Score=26.86 Aligned_cols=76 Identities=21% Similarity=0.113 Sum_probs=52.0
Q ss_pred hceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEE-eccCCeeccC-----CCCCcceeeEEEec
Q 040957 30 IVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQ-LKRYDYFGHG-----SPTIFRQGDVIALT 103 (430)
Q Consensus 30 ~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~-~~~G~~fGe~-----~~~~~~~~~v~A~~ 103 (430)
.+....+++|+.+-.+-+.-.-..+++.|.+.+. . +|. .... -..-++|.+. .-.....++++|.+
T Consensus 30 ~f~~~~L~~Ge~~~~~~~~~E~~iv~l~G~~~V~--~---~g~---~~~~~g~R~svF~~~~p~~lYvp~g~~v~i~a~~ 101 (270)
T 2qjv_A 30 GFDVWQLXAGESITLPSDERERCLVLVAGLASVX--A---ADS---FFYRIGQRMSPFERIPAYSVYLPHHTEAXVTAET 101 (270)
T ss_dssp EEEEEEECTTCEEEECCSSEEEEEEEEESCEEEE--E---TTE---EEEEECCCSSGGGCSCCCEEEECSSCCEEEEESS
T ss_pred EEEEEEecCCCEEEecCCCcEEEEEEecceEEEE--E---CCE---EEeccccccccccCCCCcEEEECCCCEEEEEecC
Confidence 3667888999999877776788889999999998 2 222 1222 2345677643 11222378899999
Q ss_pred ceEEEEeccc
Q 040957 104 ELTCLVLPHE 113 (430)
Q Consensus 104 ~~~~l~i~~~ 113 (430)
+++++.....
T Consensus 102 ~~~~~v~sAp 111 (270)
T 2qjv_A 102 DLELAVCSAP 111 (270)
T ss_dssp SEEEEEEEEE
T ss_pred CceEEEEeee
Confidence 9888877654
No 302
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=38.58 E-value=91 Score=27.04 Aligned_cols=49 Identities=18% Similarity=0.130 Sum_probs=34.7
Q ss_pred ceEEEecCCCEEEe-CCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeecc
Q 040957 31 VIVKRYGKGEYVVR-DGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGH 88 (430)
Q Consensus 31 ~~~~~~~~ge~i~~-~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe 88 (430)
+....+++|..+-. .-....+.++|++|.+.+. . +++ ...+++||++--
T Consensus 167 ~~~~tl~PG~~~~~~~~h~~ee~~~vLeG~~~~~--~----~~~---~~~l~~GD~~~~ 216 (246)
T 1sfn_A 167 VSTMSFAPGASLPYAEVHYMEHGLLMLEGEGLYK--L----EEN---YYPVTAGDIIWM 216 (246)
T ss_dssp EEEEEECTTCBCSSCBCCSSCEEEEEEECEEEEE--E----TTE---EEEEETTCEEEE
T ss_pred EEEEEECCCCccCcccCCCceEEEEEEECEEEEE--E----CCE---EEEcCCCCEEEE
Confidence 45678889877653 3445678999999999998 2 222 357899987543
No 303
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=37.53 E-value=48 Score=30.63 Aligned_cols=71 Identities=6% Similarity=0.019 Sum_probs=43.0
Q ss_pred EEEecCCCEEEeCCCc-CCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEe--cceEEEE
Q 040957 33 VKRYGKGEYVVRDGDI-GEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIAL--TELTCLV 109 (430)
Q Consensus 33 ~~~~~~ge~i~~~g~~-~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~--~~~~~l~ 109 (430)
...+.+|...-..-.. ...+++|++|.+++. ..+.+|+. ....+++||++=-- .+. ...+.+. ++++++.
T Consensus 56 ~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~--v~~~~g~~--~~~~l~~GD~~~ip-~g~--~H~~~n~~~~~~~~l~ 128 (361)
T 2vqa_A 56 YMSLEPGAIRELHWHANAAEWAYVMEGRTRIT--LTSPEGKV--EIADVDKGGLWYFP-RGW--GHSIEGIGPDTAKFLL 128 (361)
T ss_dssp EEEECTTCEEEEEECTTCCEEEEEEESEEEEE--EECTTSCE--EEEEEETTEEEEEC-TTC--EEEEEECSSSCEEEEE
T ss_pred EEEEcCCCCCCceeCCCCCEEEEEEEeEEEEE--EEeCCCcE--EEEEEcCCCEEEEC-CCC--eEEEEeCCCCCEEEEE
Confidence 4567888865443334 789999999999998 54333322 33678999865432 122 2234444 3566655
Q ss_pred e
Q 040957 110 L 110 (430)
Q Consensus 110 i 110 (430)
+
T Consensus 129 v 129 (361)
T 2vqa_A 129 V 129 (361)
T ss_dssp E
T ss_pred E
Confidence 4
No 304
>4b0b_A 3-hydroxydecanoyl-[acyl-carrier-protein] dehydrat; lyase, fatty acid biosynthesis, bacterial virulence, drug DI; HET: 54F; 1.90A {Pseudomonas aeruginosa} PDB: 4b0c_A* 4b0j_A* 4b8u_A* 4b0i_A*
Probab=37.49 E-value=69 Score=26.25 Aligned_cols=57 Identities=12% Similarity=0.029 Sum_probs=41.8
Q ss_pred eeecceeeeccCCCCCCCe-EEeEEeecce---eCCeeeEEEEEEccCCCEEEEEeccceecc
Q 040957 361 SLSLDHSMWFHRSFRADDW-LLFVIVSPVA---SKARGFVSGEMFNTKGELLVSLTQEALLRS 419 (430)
Q Consensus 361 ~~sld~si~f~~~~~~~~W-~l~~~~~~~~---~~gr~~~~~~i~~~~G~lvA~~~Q~~l~r~ 419 (430)
..+++ .+.|+.++.+.+- +.++.+.... ..+.+..+++++ -||++||++...++--.
T Consensus 105 ~~gi~-~~kF~~~V~Pgd~~l~l~v~i~~~~~~~~~~~~~~~~~~-vdg~~vaeae~~~v~l~ 165 (171)
T 4b0b_A 105 ALGSG-EVKFFGQVLPTAKKVTYNIHIKRTINRSLVLAIADGTVS-VDGREIYSAEGLRVGLF 165 (171)
T ss_dssp EEEES-EEEECCCCCTTCCEEEEEEEEEEEEESSSEEEEEEEEEE-ETTEEEEEEEEEEEEEE
T ss_pred Eeeee-EEEEecCccCCCEEEEEEEEEEEEeecCCCEEEEEEEEE-ECCEEEEEEEeeEEEEe
Confidence 44554 5789888777776 6777776664 366788899998 69999999987665443
No 305
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=37.18 E-value=45 Score=31.19 Aligned_cols=52 Identities=12% Similarity=-0.040 Sum_probs=35.5
Q ss_pred eEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeec
Q 040957 32 IVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFG 87 (430)
Q Consensus 32 ~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fG 87 (430)
....+.+|..+-..-.....+++|++|.+++. ..+.+|+ .....+.+||++=
T Consensus 82 ~~~~l~pg~~~~~H~H~~~E~~~Vl~G~~~~~--~~~~~g~--~~~~~l~~GD~~~ 133 (385)
T 1j58_A 82 VNMRLKPGAIRELHWHKEAEWAYMIYGSARVT--IVDEKGR--SFIDDVGEGDLWY 133 (385)
T ss_dssp EEEEECTTCEEEEEEESSCEEEEEEEEEEEEE--EECTTSC--EEEEEEETTEEEE
T ss_pred EEEEECCCCCCCCccCChheEEEEEeeeEEEE--EEeCCCc--EEEEEeCCCCEEE
Confidence 35677888866443344789999999999998 4433333 2234789998763
No 306
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=36.77 E-value=90 Score=26.94 Aligned_cols=71 Identities=10% Similarity=0.013 Sum_probs=42.7
Q ss_pred ceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeec-cCCCCCcceeeEEEecceEEEE
Q 040957 31 VIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFG-HGSPTIFRQGDVIALTELTCLV 109 (430)
Q Consensus 31 ~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fG-e~~~~~~~~~~v~A~~~~~~l~ 109 (430)
+....+++|..+-.--.+...+++|++|.+.+. . +++ ...+.+||.+= -. .+.++......-++|.++.
T Consensus 36 ~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~--~---~~~----~~~l~~Gd~i~~ip-~~~~H~~~n~~~~~~~~l~ 105 (243)
T 3h7j_A 36 VLMSYVPPHTNVEPHQHKEVQIGMVVSGELMMT--V---GDV----TRKMTALESAYIAP-PHVPHGARNDTDQEVIAID 105 (243)
T ss_dssp EEEEEECTTEEEEEECCSSEEEEEEEESEEEEE--E---TTE----EEEEETTTCEEEEC-TTCCEEEEECSSSCEEEEE
T ss_pred EEEEEECCCCccCCEECCCcEEEEEEEeEEEEE--E---CCE----EEEECCCCEEEEcC-CCCcEeeEeCCCCcEEEEE
Confidence 444568888877655556788999999999998 3 222 35789998431 11 1223332222233466666
Q ss_pred ec
Q 040957 110 LP 111 (430)
Q Consensus 110 i~ 111 (430)
|.
T Consensus 106 i~ 107 (243)
T 3h7j_A 106 IK 107 (243)
T ss_dssp EE
T ss_pred Ee
Confidence 53
No 307
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=36.56 E-value=40 Score=26.29 Aligned_cols=64 Identities=16% Similarity=0.008 Sum_probs=37.9
Q ss_pred EEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEecceEEEEe
Q 040957 33 VKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIALTELTCLVL 110 (430)
Q Consensus 33 ~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~~~~~~l~i 110 (430)
...+++|..-.. ...+.+++|++|.+.+. . +| + ...+++||.|--- .+.++.+ ...++++++.+
T Consensus 61 ~~~~~pG~~~~h--~~~~E~~~VLeG~~~l~--~---~g-~---~~~l~~GD~i~~p-~g~~h~~--~~~~~~~~l~v 124 (133)
T 2pyt_A 61 FMQWDNAFFPWT--LNYDEIDMVLEGELHVR--H---EG-E---TMIAKAGDVMFIP-KGSSIEF--GTPTSVRFLYV 124 (133)
T ss_dssp EEEEEEEEEEEE--CSSEEEEEEEEEEEEEE--E---TT-E---EEEEETTCEEEEC-TTCEEEE--EEEEEEEEEEE
T ss_pred EEEECCCCcccc--CCCCEEEEEEECEEEEE--E---CC-E---EEEECCCcEEEEC-CCCEEEE--EeCCCEEEEEE
Confidence 456677743222 23678999999999998 2 22 2 2478999876543 2222333 23455655554
No 308
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=35.89 E-value=63 Score=31.24 Aligned_cols=59 Identities=7% Similarity=-0.105 Sum_probs=40.3
Q ss_pred HHhhceEEEecCCCEEEeCC-CcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeecc
Q 040957 27 IADIVIVKRYGKGEYVVRDG-DIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGH 88 (430)
Q Consensus 27 l~~~~~~~~~~~ge~i~~~g-~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe 88 (430)
+--.+....+.+|.+...-= -.+..+++|++|.+++. ..+.+|.+ ..-..+.+||+|=-
T Consensus 320 l~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~--vv~~~g~~-~~~~~l~~GDv~v~ 379 (459)
T 2e9q_A 320 VRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQ--VVDNFGQS-VFDGEVREGQVLMI 379 (459)
T ss_dssp HTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEE--EECTTSCE-EEEEEEETTCEEEE
T ss_pred cccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEE--EEeCCCCE-EEeeEEeCCcEEEE
Confidence 33345567788888765432 33578999999999998 55555544 33356999998744
No 309
>4b8u_A 3-hydroxydecanoyl-[acyl-carrier-protein] dehydrat; lyase, fatty acid biosynthesis, inhibitor, bacterial virulen discovery; HET: IBK; 2.76A {Pseudomonas aeruginosa}
Probab=35.57 E-value=1.8e+02 Score=23.74 Aligned_cols=86 Identities=12% Similarity=-0.024 Sum_probs=47.0
Q ss_pred eeecccCCCCCCCceeehhHHHHHHHHHHhccCCCCCc--ceee-eeeeccCcCCCCC-eEEEEEE--ee-eCCCeeEEE
Q 040957 149 IFQGITLPDAPKFGKVFGGQLVGQALAAASKTVDCLKI--VHSL-HCYFLLVGDLNIP-IIYQVHR--VR-DGNSFATRR 221 (430)
Q Consensus 149 ~f~~~~~~~~~~~~~~~GG~~~a~al~Aa~~~~~~~~~--~~s~-~~~Fl~~~~~~~p-i~~~V~~--lr-~Gr~~s~~~ 221 (430)
.|.+..+. .|...++-+=-.+||++............ ..++ .+.|-++..|+.. ++|+|+. +. .++.+....
T Consensus 66 fF~gHFp~-~PVMPGvL~~EamaQ~~~~~l~~~~~~~~~~~~~i~~~kFr~~V~Pgd~lv~~ei~i~~v~~~~~~~~~~d 144 (171)
T 4b8u_A 66 FFACHFEG-DPVMPGCLGLDAMWQLVGFYLGWQGNPGRGRALGSGEVKFFGQVLPTAKKVTYNIHIKRTINRSLVLAIAD 144 (171)
T ss_dssp HHHHSCTT-SCCCCHHHHHHHHHHHHHHHHHHTTCCSEEEEEEESCEEECCCCCTTCCEEEEEEEEEEEECSSSEEEEEE
T ss_pred eEeccCCC-CCCCCccHHHHHHHHHhhhhhccccCCCeeEEeccceeEEEeeECCCCEEEEEEEEEEEEEeCCceEEEEE
Confidence 34444332 23333444444566664433322221111 2222 5779888888653 4566543 33 344466777
Q ss_pred EEEEECCeeEEEEE
Q 040957 222 VDAIQKGNIIFTLL 235 (430)
Q Consensus 222 V~~~Q~g~~~~~~~ 235 (430)
.+++-||+++++|.
T Consensus 145 g~~~VDG~~v~eA~ 158 (171)
T 4b8u_A 145 GTVSVDGREIYSAE 158 (171)
T ss_dssp EEEEETTEEEEEEE
T ss_pred EEEEECCEEEEEEe
Confidence 88999999999886
No 310
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=34.40 E-value=55 Score=26.44 Aligned_cols=69 Identities=7% Similarity=0.047 Sum_probs=44.2
Q ss_pred ceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEe----cceE
Q 040957 31 VIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIAL----TELT 106 (430)
Q Consensus 31 ~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~----~~~~ 106 (430)
....++++|..+-.-...+...++|++|..+.. +.+ ..+.+|+++=+- ....-+..+. ++|.
T Consensus 44 v~lvr~~pG~~~p~H~H~g~ee~~VL~G~~~~~------e~~-----~~~~~Gd~~~~P---~g~~H~~~~~~~~~e~~~ 109 (159)
T 3ebr_A 44 ITLLKAPAGMEMPRHHHTGTVIVYTVQGSWRYK------EHD-----WVAHAGSVVYET---ASTRHTPQSAYAEGPDII 109 (159)
T ss_dssp EEEEEECSSCBCCCEEESSCEEEEEEESCEEET------TSS-----CCBCTTCEEEEC---SSEEECEEESSSSSSCEE
T ss_pred EEEEEECCCCCcccccCCCCEEEEEEEeEEEEe------CCC-----eEECCCeEEEEC---CCCcceeEeCCCCCCCEE
Confidence 446778888887666566677889999997754 111 257788876543 1223445555 6788
Q ss_pred EEEeccc
Q 040957 107 CLVLPHE 113 (430)
Q Consensus 107 ~l~i~~~ 113 (430)
++.+-..
T Consensus 110 ~~~~~~G 116 (159)
T 3ebr_A 110 TFNIVAG 116 (159)
T ss_dssp EEEEEES
T ss_pred EEEEecC
Confidence 8875443
No 311
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=34.13 E-value=2.2e+02 Score=24.45 Aligned_cols=65 Identities=20% Similarity=0.174 Sum_probs=41.2
Q ss_pred EEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEecceEEEEec
Q 040957 33 VKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIALTELTCLVLP 111 (430)
Q Consensus 33 ~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~~~~~~l~i~ 111 (430)
...+++|...-..- .+.+++|++|.+.+. . +++ ...+++||.+=-- .+.++.. +..++++++.+.
T Consensus 54 ~~~l~Pg~~~~~~~--~ee~~~Vl~G~~~~~--~----~~~---~~~l~~Gd~~~~p-~~~~H~~--~n~~~~~~l~v~ 118 (246)
T 1sfn_A 54 TAEMPAGAQATESV--YQRFAFVLSGEVDVA--V----GGE---TRTLREYDYVYLP-AGEKHML--TAKTDARVSVFE 118 (246)
T ss_dssp EEEECTTCEEECCS--SEEEEEEEEEEEEEE--C----SSC---EEEECTTEEEEEC-TTCCCEE--EEEEEEEEEEEE
T ss_pred EEEECCCCcCCCCc--eeEEEEEEECEEEEE--E----CCE---EEEECCCCEEEEC-CCCCEEE--EeCCCEEEEEEE
Confidence 45778877655442 778999999999998 3 222 3578999866443 2233333 222677776664
No 312
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=33.73 E-value=1.1e+02 Score=25.54 Aligned_cols=64 Identities=16% Similarity=0.112 Sum_probs=42.0
Q ss_pred ceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEE--ecceEEE
Q 040957 31 VIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIA--LTELTCL 108 (430)
Q Consensus 31 ~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A--~~~~~~l 108 (430)
+...++++|..+-.-...+..+++|++|.++ ++. ..+.+|+++=.- .+.. -+.++ .++|.|+
T Consensus 127 v~l~~~~pG~~~p~H~H~g~E~~~VL~G~f~--------de~-----~~~~~Gd~~~~p-~g~~--H~p~a~~~~gc~~l 190 (195)
T 2q1z_B 127 ARLLWIPGGQAVPDHGHRGLELTLVLQGAFR--------DET-----DRFGAGDIEIAD-QELE--HTPVAERGLDCICL 190 (195)
T ss_dssp EEEEEECTTCBCCCCCCSSCEEEEEEESEEE--------CSS-----SEEETTCEEEEC-SSCC--CCCEECSSSCEEEE
T ss_pred EEEEEECCCCCCCCcCCCCeEEEEEEEEEEE--------CCc-----EEECCCeEEEeC-cCCc--cCCEeCCCCCEEEE
Confidence 4567888998888777788899999999843 111 257888876443 1122 23344 5678777
Q ss_pred Ee
Q 040957 109 VL 110 (430)
Q Consensus 109 ~i 110 (430)
.+
T Consensus 191 ~~ 192 (195)
T 2q1z_B 191 AA 192 (195)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 313
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=33.49 E-value=37 Score=27.97 Aligned_cols=60 Identities=20% Similarity=0.224 Sum_probs=38.9
Q ss_pred cCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEec-ceEEEEeccccc
Q 040957 48 IGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIALT-ELTCLVLPHEHC 115 (430)
Q Consensus 48 ~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~~-~~~~l~i~~~~f 115 (430)
+.+.+|++++|.+.+. .. ++++ ..-..+++||+|=-. .+.++ +-++.+ ++.++.|.+..-
T Consensus 54 ~~dE~FyvlkG~m~i~--v~--d~g~-~~~v~l~eGE~f~lP-~gvpH--~P~r~~~e~~~lviE~~r~ 114 (174)
T 1yfu_A 54 PLEEFFYQLRGNAYLN--LW--VDGR-RERADLKEGDIFLLP-PHVRH--SPQRPEAGSACLVIERQRP 114 (174)
T ss_dssp SSCEEEEEEESCEEEE--EE--ETTE-EEEEEECTTCEEEEC-TTCCE--EEEBCCTTCEEEEEEECCC
T ss_pred CCceEEEEEeeEEEEE--EE--cCCc-eeeEEECCCCEEEeC-CCCCc--CccccCCCCEEEEEEeCCC
Confidence 3578999999999988 43 2221 233578999887553 22222 334456 888888887643
No 314
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=33.37 E-value=37 Score=32.76 Aligned_cols=52 Identities=10% Similarity=0.059 Sum_probs=36.8
Q ss_pred eEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeecc
Q 040957 32 IVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGH 88 (430)
Q Consensus 32 ~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe 88 (430)
....+++|..+...-...+.+++|++|.+++. ..+.+++ ....+++||++--
T Consensus 89 ~~~~l~Pgg~~~pHh~~a~E~~yVl~G~g~v~--~v~~~~~---~~~~l~~GDv~~~ 140 (445)
T 2cav_A 89 LEYCSKPNTLLLPHHSDSDLLVLVLEGQAILV--LVNPDGR---DTYKLDQGDAIKI 140 (445)
T ss_dssp EEEEECSSEEEEEEEESSEEEEEEEESEEEEE--EEETTEE---EEEEEETTEEEEE
T ss_pred EEEEECCCcCccCcCCCCceEEEEEeCEEEEE--EEeCCCC---EEEEecCCCEEEE
Confidence 34678888777655445689999999999988 4433322 3567899998744
No 315
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=33.05 E-value=27 Score=25.19 Aligned_cols=49 Identities=12% Similarity=-0.012 Sum_probs=29.8
Q ss_pred EEEecCCCEEEeCCCcCC-eEEEEEeeEEEEEEecccccccCCcceEEeccCCeecc
Q 040957 33 VKRYGKGEYVVRDGDIGE-GIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGH 88 (430)
Q Consensus 33 ~~~~~~ge~i~~~g~~~~-~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe 88 (430)
...+++|...-..-.... .+++|++|.+++. .. +|. ....+.+||.+=.
T Consensus 22 ~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~--~~--~g~---~~~~l~~Gd~~~~ 71 (97)
T 2fqp_A 22 EWRFPPGGETGWHRHSMDYVVVPMTTGPLLLE--TP--EGS---VTSQLTRGVSYTR 71 (97)
T ss_dssp EEEECTTCBCCSEECCSCEEEEESSCEEEEEE--ET--TEE---EEEEECTTCCEEE
T ss_pred EEEECCCCCCCCEECCCCcEEEEEeecEEEEE--eC--CCC---EEEEEcCCCEEEe
Confidence 456677765422222333 4999999999998 32 221 2357888886643
No 316
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=32.66 E-value=67 Score=25.85 Aligned_cols=70 Identities=16% Similarity=-0.002 Sum_probs=38.7
Q ss_pred EEEecCCCEEE--eCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCC--CcceeeEEEecceEEE
Q 040957 33 VKRYGKGEYVV--RDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPT--IFRQGDVIALTELTCL 108 (430)
Q Consensus 33 ~~~~~~ge~i~--~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~--~~~~~~v~A~~~~~~l 108 (430)
...+++|.... ..-...+.+++|++|.+.+. .. ++ ...+.+||++--. .+ .++...-..-++++++
T Consensus 47 ~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~--~~----~~---~~~l~~GD~i~ip-~~~~~~H~~~n~~~~~~~~l 116 (163)
T 3i7d_A 47 LVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLV--DD----QG---EHPMVPGDCAAFP-AGDPNGHQFVNRTDAPATFL 116 (163)
T ss_dssp EEEECTTCBSSSSEEESSCCEEEEEEESCEEEE--ET----TE---EEEECTTCEEEEC-TTCCCCBEEECCSSSCEEEE
T ss_pred EEEECCCCcCCCCccCCCCcEEEEEEECEEEEE--EC----CE---EEEeCCCCEEEEC-CCCCcceEEEECCCCCEEEE
Confidence 45667776432 11122368999999999998 32 22 3578888865432 12 3333322223456655
Q ss_pred Eecc
Q 040957 109 VLPH 112 (430)
Q Consensus 109 ~i~~ 112 (430)
.+..
T Consensus 117 ~v~~ 120 (163)
T 3i7d_A 117 VVGT 120 (163)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 5543
No 317
>2xp1_A SPT6; transcription, IWS1, histone chaperone, mRNA export; 2.20A {Antonospora locustae}
Probab=32.62 E-value=57 Score=27.01 Aligned_cols=39 Identities=10% Similarity=0.204 Sum_probs=31.6
Q ss_pred CCCCCCCCCHHHHHHHHhhceEEEecCCCEEEeCCCcCCeEEEEE
Q 040957 12 CVPLLQRLPGSSLKRIADIVIVKRYGKGEYVVRDGDIGEGIYFIW 56 (430)
Q Consensus 12 ~~~~f~~l~~~~~~~l~~~~~~~~~~~ge~i~~~g~~~~~ly~I~ 56 (430)
..|.|.+++-.+-++++.. ..|+.|+++...++++.+..
T Consensus 13 ~HP~F~n~s~~qAe~~L~~------~~G~~liRPSsk~~~ltit~ 51 (178)
T 2xp1_A 13 KHPLFKNFNVTESENYLRS------STDDFLIRKGSRHGYCVLVI 51 (178)
T ss_dssp GSTTEECCCHHHHHHHHHH------SSCCEEEEECSSTTEEEEEE
T ss_pred cCCCcCCCCHHHHHHHHhc------CCCCEEEeecCCCCcEEEEE
Confidence 5899999999999888877 24999999988877654443
No 318
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=32.24 E-value=47 Score=24.66 Aligned_cols=46 Identities=15% Similarity=0.094 Sum_probs=27.7
Q ss_pred EEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeec
Q 040957 34 KRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFG 87 (430)
Q Consensus 34 ~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fG 87 (430)
..+++|..+-..-.....+++|++|.+.+. . +++. ...+.+||++=
T Consensus 32 ~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~--i---~~~~---~~~l~~Gd~i~ 77 (117)
T 2b8m_A 32 IVLPRGEQMPKHYSNSYVHLIIIKGEMTLT--L---EDQE---PHNYKEGNIVY 77 (117)
T ss_dssp EEEETTCBCCCEECSSCEEEEEEESEEEEE--E---TTSC---CEEEETTCEEE
T ss_pred EEECCCCcCCCEeCCCcEEEEEEeCEEEEE--E---CCEE---EEEeCCCCEEE
Confidence 345565543222223567899999999998 3 2222 12688888653
No 319
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=32.22 E-value=1.2e+02 Score=28.31 Aligned_cols=75 Identities=11% Similarity=-0.050 Sum_probs=43.3
Q ss_pred EEEecCCCEEEeCCCcC-CeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEecceEEEEec
Q 040957 33 VKRYGKGEYVVRDGDIG-EGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIALTELTCLVLP 111 (430)
Q Consensus 33 ~~~~~~ge~i~~~g~~~-~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~~~~~~l~i~ 111 (430)
...+++|..+-..-... ..+++|++|.+++. ....+|.. ....+.+||+|--- .+.++......-+++.++.+-
T Consensus 261 ~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~--i~~~~g~~--~~~~l~~GD~~~ip-~~~~H~~~n~~~~~~~~l~v~ 335 (385)
T 1j58_A 261 LVTVEPGAMRELHWHPNTHEWQYYISGKARMT--VFASDGHA--RTFNYQAGDVGYVP-FAMGHYVENIGDEPLVFLEIF 335 (385)
T ss_dssp EEEECTTCEEEEEECSSSCEEEEEEESEEEEE--EEEETTEE--EEEEEESSCEEEEC-TTCBEEEEECSSSCEEEEEEE
T ss_pred EEEECCCcccCceeCCCCCEEEEEEeCeEEEE--EEcCCCcE--EEEEEcCCCEEEEC-CCCeEEEEECCCCCEEEEEEE
Confidence 45667777664433344 78999999999988 43233321 24578899876432 222333222223456666664
Q ss_pred c
Q 040957 112 H 112 (430)
Q Consensus 112 ~ 112 (430)
.
T Consensus 336 ~ 336 (385)
T 1j58_A 336 K 336 (385)
T ss_dssp S
T ss_pred C
Confidence 4
No 320
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=32.12 E-value=1.2e+02 Score=21.85 Aligned_cols=66 Identities=17% Similarity=0.138 Sum_probs=36.8
Q ss_pred EEEecCCCEEEeCCCcC-CeE-EEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEecceEEEE
Q 040957 33 VKRYGKGEYVVRDGDIG-EGI-YFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIALTELTCLV 109 (430)
Q Consensus 33 ~~~~~~ge~i~~~g~~~-~~l-y~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~~~~~~l~ 109 (430)
...+++|..+-..-... ..+ ++|++|.+.+. .. ++. ...+.+||++=-. .+.+ -.+.+.+++.++.
T Consensus 37 ~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~--~~--~~~----~~~l~~Gd~~~ip-~~~~--H~~~~~~~~~~l~ 104 (110)
T 2q30_A 37 SFTFKAGQELPVHSHNIEGELNIVVLEGEGEFV--GD--GDA----VIPAPRGAVLVAP-ISTP--HGVRAVTDMKVLV 104 (110)
T ss_dssp EEEECTTCEEEEECCSSSCEEEEEEEESCEEEE--CG--GGC----EEEECTTEEEEEE-TTSC--EEEEESSSEEEEE
T ss_pred EEEECCCCcCCcccCCCCccEEEEEEeCEEEEE--eC--CCE----EEEECCCCEEEeC-CCCc--EEEEEcCCcEEEE
Confidence 34667887765433332 355 79999999988 21 122 2568888765332 1222 2344455555443
No 321
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=31.91 E-value=67 Score=24.17 Aligned_cols=47 Identities=13% Similarity=0.128 Sum_probs=30.6
Q ss_pred EEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeecc
Q 040957 33 VKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGH 88 (430)
Q Consensus 33 ~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe 88 (430)
...+++|...-..-.....+++|++|.+.+. . +++ ...+.+||++=-
T Consensus 38 ~~~~~pg~~~~~H~H~~~Ei~~v~~G~~~~~--i---~~~----~~~l~~Gd~~~i 84 (128)
T 4i4a_A 38 WCIVRPETKSFRHSHNEYELFIVIQGNAIIR--I---NDE----DFPVTKGDLIII 84 (128)
T ss_dssp EEEECTTEECCCBCCSSEEEEEEEESEEEEE--E---TTE----EEEEETTCEEEE
T ss_pred EEEECCCCccCCEecCCeEEEEEEeCEEEEE--E---CCE----EEEECCCcEEEE
Confidence 4556676644333345678999999999998 3 222 357888886533
No 322
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=31.64 E-value=66 Score=29.66 Aligned_cols=53 Identities=9% Similarity=0.031 Sum_probs=35.2
Q ss_pred eEEEecCCCEEEeCCCcC-CeEEEEEeeEEEEEEecccccccCCcceEEeccCCeecc
Q 040957 32 IVKRYGKGEYVVRDGDIG-EGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGH 88 (430)
Q Consensus 32 ~~~~~~~ge~i~~~g~~~-~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe 88 (430)
....+++|..+-..-... ..+++|++|.+++. ..+.+|+ .....+++||+|=-
T Consensus 237 ~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~--v~~~~g~--~~~~~l~~GD~~~i 290 (361)
T 2vqa_A 237 ALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLT--VFASEGK--ASVSRLQQGDVGYV 290 (361)
T ss_dssp EEEEECTTCEEEEEECSSCCEEEEEEESCEEEE--EECSTTC--EEEEEECTTCEEEE
T ss_pred EEEEECCCcccccccCCCCCEEEEEEeCEEEEE--EEcCCCc--EEEEEECCCCEEEE
Confidence 356778888765433333 78999999999988 4332333 23467899987643
No 323
>3u0a_A Acyl-COA thioesterase II TESB2; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, hydrolase; 2.50A {Mycobacterium marinum}
Probab=31.60 E-value=91 Score=27.83 Aligned_cols=48 Identities=17% Similarity=0.131 Sum_probs=37.0
Q ss_pred cceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEe
Q 040957 364 LDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLT 412 (430)
Q Consensus 364 ld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~ 412 (430)
...+.||.++.+.+..+.|+++..+-+...+..+++++ ++|+.+.+++
T Consensus 60 hSlh~~Fl~pg~~~~pi~~~Ve~lRdGRsfs~r~V~a~-Q~g~~i~~~~ 107 (285)
T 3u0a_A 60 HSLHGYFLRSGDAQEPTVFLVERTRDGGSFVTRRVNAV-QHGEVIFSMG 107 (285)
T ss_dssp EEEEEEECCCCCTTSCEEEEEEEEEECSSEEEEEEEEE-ETTEEEEEEE
T ss_pred EEEEEEecCCCCCCCCEEEEEEEEeCCCcEEEEEEEEE-ECCEEEEEEE
Confidence 34477898988888889998888777777777777777 7888776654
No 324
>1c8u_A Acyl-COA thioesterase II; internal repeats, hydrolase; HET: LDA; 1.90A {Escherichia coli} SCOP: d.38.1.3 d.38.1.3
Probab=31.52 E-value=89 Score=27.82 Aligned_cols=47 Identities=9% Similarity=0.110 Sum_probs=37.0
Q ss_pred ceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEe
Q 040957 365 DHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLT 412 (430)
Q Consensus 365 d~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~ 412 (430)
..+.+|.++.+.+..+.|+++..+-+......+++++ ++|+.+.+++
T Consensus 58 Slh~~Fl~pg~~~~pi~~~Ve~lRdGrs~s~r~V~a~-Q~g~~i~~~~ 104 (285)
T 1c8u_A 58 SFHSYFLRPGDSKKPIIYDVETLRDGNSFSARRVAAI-QNGKPIFYMT 104 (285)
T ss_dssp EEEEEECSCCBTTSCEEEEEEEEEECSSEEEEEEEEE-ETTEEEEEEE
T ss_pred EEEEEccCCCCCCCCEEEEEEEEecCCcEEEEEEEEE-ECCEEEEEEE
Confidence 3477898988888899999988877777777888887 6887776553
No 325
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=30.57 E-value=45 Score=32.01 Aligned_cols=53 Identities=9% Similarity=0.051 Sum_probs=38.5
Q ss_pred ceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeecc
Q 040957 31 VIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGH 88 (430)
Q Consensus 31 ~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe 88 (430)
+....+++|..+...-...+.+++|++|...+. ..+.++ .....+++||++--
T Consensus 63 ~~~~~l~PGg~~~pHh~~a~Ei~yVl~G~g~v~--~v~~~~---~~~~~l~~GDv~~i 115 (434)
T 2ea7_A 63 VVEFKSKPNTLLLPHHADADFLLVVLNGTAVLT--LVNPDS---RDSYILEQGHAQKI 115 (434)
T ss_dssp EEEEEECTTEEEEEEEESEEEEEEEEESEEEEE--EECSSC---EEEEEEETTEEEEE
T ss_pred EEEEEecCCcCccCccCCCceEEEEEecEEEEE--EEeCCC---CEEEEeCCCCEEEE
Confidence 446788999888776455689999999999988 433222 33567899998744
No 326
>3rd7_A Acyl-COA thioesterase; seattle structur genomics center for infectious disease, ssgcid, hydrolase; 1.95A {Mycobacterium avium}
Probab=30.43 E-value=96 Score=27.69 Aligned_cols=47 Identities=13% Similarity=0.042 Sum_probs=34.9
Q ss_pred cceeeeccCCCCCCCeEEeEEeecceeCCeeeEEEEEEccCCCEEEEE
Q 040957 364 LDHSMWFHRSFRADDWLLFVIVSPVASKARGFVSGEMFNTKGELLVSL 411 (430)
Q Consensus 364 ld~si~f~~~~~~~~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~ 411 (430)
...+.||.+|.+++..+.|+++..+-+...+.-+++.+ ++|+.+.++
T Consensus 59 hSlh~yFl~pg~~~~Pi~y~Ve~lRdGRSfstr~V~a~-Q~g~~i~~~ 105 (286)
T 3rd7_A 59 HSMHMYFLRRGDARQPIQYDVTPLRDGGTISSRRVTAS-QSGVVLFEA 105 (286)
T ss_dssp EEEEEEECSCCBTTSCEEEEEEEEEECSSEEEEEEEEE-ETTEEEEEE
T ss_pred EEEEEEccCCCCCCCCEEEEEEEEECCCcEEEEEEEEE-ECCEEEEEE
Confidence 34467898988888898888887766666666677776 688877654
No 327
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=30.43 E-value=70 Score=28.46 Aligned_cols=47 Identities=15% Similarity=0.268 Sum_probs=34.4
Q ss_pred ceEEEecCCCEEEe-CCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCee
Q 040957 31 VIVKRYGKGEYVVR-DGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYF 86 (430)
Q Consensus 31 ~~~~~~~~ge~i~~-~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~f 86 (430)
+....+++|..|-. +-....+.++|++|...+. .+++ ...+++||++
T Consensus 193 ~~~~~l~pG~~i~~~~~h~~e~~~~il~G~~~~~------~~~~---~~~v~~GD~~ 240 (278)
T 1sq4_A 193 VNIVNFEPGGVIPFAETHVMEHGLYVLEGKAVYR------LNQD---WVEVEAGDFM 240 (278)
T ss_dssp EEEEEECSSSEESCCCCCSEEEEEEEEECEEEEE------ETTE---EEEEETTCEE
T ss_pred EEEEEECCCCCcCCCCCCCccEEEEEEeCEEEEE------ECCE---EEEeCCCCEE
Confidence 55678899998864 4444457899999999988 2222 4678999976
No 328
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=30.26 E-value=82 Score=25.70 Aligned_cols=53 Identities=11% Similarity=-0.036 Sum_probs=31.5
Q ss_pred cCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEecceEEEEe
Q 040957 48 IGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIALTELTCLVL 110 (430)
Q Consensus 48 ~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~~~~~~l~i 110 (430)
.+..+++|++|.+.+. .. + + ...+.+|+.|=-- .+.++...-..-++++++.+
T Consensus 109 ~gEE~~yVLeG~v~vt--l~---g-~---~~~L~~Gds~~iP-~g~~H~~~N~~d~~Arll~V 161 (166)
T 2vpv_A 109 RTYITFHVIQGIVEVT--VC---K-N---KFLSVKGSTFQIP-AFNEYAIANRGNDEAKMFFV 161 (166)
T ss_dssp SEEEEEEEEESEEEEE--ET---T-E---EEEEETTCEEEEC-TTCEEEEEECSSSCEEEEEE
T ss_pred CceEEEEEEEeEEEEE--EC---C-E---EEEEcCCCEEEEC-CCCCEEEEECCCCCEEEEEE
Confidence 4577999999999999 32 2 2 3578898866432 22333333333344555554
No 329
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=30.23 E-value=91 Score=26.67 Aligned_cols=32 Identities=16% Similarity=0.150 Sum_probs=22.7
Q ss_pred CcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCee
Q 040957 47 DIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYF 86 (430)
Q Consensus 47 ~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~f 86 (430)
.+...+|+|++|.+++. .. +++ ...+++|+.+
T Consensus 150 Hp~EEiy~VLsG~~e~~--v~--~g~----~~~l~pGd~v 181 (217)
T 4b29_A 150 HLPEELYSVVSGRALFH--LR--NAP----DLMLEPGQTR 181 (217)
T ss_dssp CSSEEEEEEEEECEEEE--ET--TSC----CEEECTTCEE
T ss_pred CCCceEEEEEeCCEEEE--EC--CCC----EEecCCCCEE
Confidence 45689999999999998 32 222 3567888754
No 330
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=30.14 E-value=90 Score=25.61 Aligned_cols=44 Identities=11% Similarity=-0.085 Sum_probs=28.5
Q ss_pred EEecCCCEEEe--CCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCee
Q 040957 34 KRYGKGEYVVR--DGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYF 86 (430)
Q Consensus 34 ~~~~~ge~i~~--~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~f 86 (430)
..+++|..... --.....+++|++|.+.+. . + ++ ...+.+||++
T Consensus 109 ~~~~pg~~~~~~~H~h~~~E~~~Vl~G~~~~~--~---~-~~---~~~l~~GD~i 154 (192)
T 1y9q_A 109 ITLLDHHQQMSSPHALGVIEYIHVLEGIMKVF--F---D-EQ---WHELQQGEHI 154 (192)
T ss_dssp EEECTTCEEEECCCSTTCEEEEEEEESCEEEE--E---T-TE---EEEECTTCEE
T ss_pred EEECCCCCccCCCCCCCCEEEEEEEEeEEEEE--E---C-CE---EEEeCCCCEE
Confidence 35566665542 2233468999999999988 3 2 22 3578899866
No 331
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=29.36 E-value=96 Score=29.94 Aligned_cols=34 Identities=9% Similarity=0.006 Sum_probs=27.3
Q ss_pred hceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEE
Q 040957 30 IVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVS 63 (430)
Q Consensus 30 ~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~ 63 (430)
.+....+++|.++...=.....+++|++|...+.
T Consensus 64 s~~r~~i~pggl~~Ph~h~a~ei~yVl~G~g~vg 97 (459)
T 2e9q_A 64 NMIRHTIRPKGLLLPGFSNAPKLIFVAQGFGIRG 97 (459)
T ss_dssp EEEEEEECTTEEEEEEEESSCEEEEEEECEEEEE
T ss_pred EEEEEEEcCCCEecceecCCceEEEEEeeEEEEE
Confidence 3445788999888665556889999999999988
No 332
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=29.19 E-value=42 Score=32.01 Aligned_cols=53 Identities=11% Similarity=0.123 Sum_probs=38.0
Q ss_pred ceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeecc
Q 040957 31 VIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGH 88 (430)
Q Consensus 31 ~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe 88 (430)
+....+++|..+...-...+.+++|++|.+++. ..+.+ + .....+++||++--
T Consensus 51 ~~~~~l~PGg~~~pHh~~a~E~~yVl~G~g~v~--~v~~~-~--~~~~~l~~GDv~~i 103 (416)
T 1uij_A 51 IVQFQSKPNTILLPHHADADFLLFVLSGRAILT--LVNND-D--RDSYNLHPGDAQRI 103 (416)
T ss_dssp EEEEEECTTEEEEEEEESEEEEEEEEESCEEEE--EECSS-C--EEEEEECTTEEEEE
T ss_pred EEEEEeccCcCcccccCCCceEEEEEeeEEEEE--EEECC-C--CeEEEecCCCEEEE
Confidence 446788999877666555679999999999988 44332 2 23467899998743
No 333
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=29.10 E-value=95 Score=30.28 Aligned_cols=56 Identities=11% Similarity=-0.058 Sum_probs=39.6
Q ss_pred hceEEEecCCCEEEeCC-CcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeecc
Q 040957 30 IVIVKRYGKGEYVVRDG-DIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGH 88 (430)
Q Consensus 30 ~~~~~~~~~ge~i~~~g-~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe 88 (430)
.+....+.+|-+.-.-= -.+..+.+|++|.+++. ..+.+|.. ..-..+.+||+|=-
T Consensus 359 S~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~--~V~~~g~~-~f~~~l~~GDV~v~ 415 (496)
T 3ksc_A 359 SAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQ--VVNCNGNT-VFDGELEAGRALTV 415 (496)
T ss_dssp EEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEE--EECTTSCE-EEEEEEETTCEEEE
T ss_pred eEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEE--EEeCCCcE-EEEEEecCCeEEEE
Confidence 45567888887775432 34678999999999998 55555554 44457899998744
No 334
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=28.70 E-value=53 Score=24.46 Aligned_cols=35 Identities=9% Similarity=0.114 Sum_probs=23.9
Q ss_pred CcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeecc
Q 040957 47 DIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGH 88 (430)
Q Consensus 47 ~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe 88 (430)
...+.+++|++|.+++. .. ++ .....+++||.+--
T Consensus 51 ~~~~E~~~Vl~G~~~l~--~~----~~-~~~~~l~~Gd~i~i 85 (112)
T 2opk_A 51 SPQDEWVMVVSGSAGIE--CE----GD-TAPRVMRPGDWLHV 85 (112)
T ss_dssp CSSEEEEEEEESCEEEE--ET----TC-SSCEEECTTEEEEE
T ss_pred CCccEEEEEEeCeEEEE--EC----CE-EEEEEECCCCEEEE
Confidence 45678999999999998 32 22 11146888886544
No 335
>4ggd_C Mitotic checkpoint serine/threonine-protein kinas beta; cell cycle, mitosis, securin, ubiquitination, WD40; 2.44A {Homo sapiens}
Probab=28.22 E-value=6.3 Score=20.39 Aligned_cols=15 Identities=27% Similarity=0.466 Sum_probs=11.3
Q ss_pred EEEeeeCCCeeEEEE
Q 040957 208 VHRVRDGNSFATRRV 222 (430)
Q Consensus 208 V~~lr~Gr~~s~~~V 222 (430)
|..+|+||-+++.+.
T Consensus 10 vqplrqgrim~tlq~ 24 (26)
T 4ggd_C 10 VQPLRQGRIMSTLQX 24 (26)
T ss_pred cchhhccchhhhhcc
Confidence 567899998887653
No 336
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=27.88 E-value=1.1e+02 Score=23.80 Aligned_cols=72 Identities=8% Similarity=-0.087 Sum_probs=35.6
Q ss_pred EecCCCEEEeCCCc-CCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEecceEEEEe
Q 040957 35 RYGKGEYVVRDGDI-GEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIALTELTCLVL 110 (430)
Q Consensus 35 ~~~~ge~i~~~g~~-~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~~~~~~l~i 110 (430)
.+++|..+-..-.. .+.+++|++|.+.+. ..+..+.. .....+.+||++=- -.+.++......-+++.++.+
T Consensus 49 ~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~--i~~~~~~~-~~~~~l~~Gd~i~i-p~g~~H~~~n~~~~~~~~l~i 121 (148)
T 2oa2_A 49 SIQVGEDIGLEIHPHLDQFLRVEEGRGLVQ--MGHRQDNL-HFQEEVFDDYAILI-PAGTWHNVRNTGNRPLKLYSI 121 (148)
T ss_dssp EECTTCBCCCBCCTTCEEEEEEEESEEEEE--EESBTTBC-CEEEEEETTCEEEE-CTTCEEEEEECSSSCEEEEEE
T ss_pred EECCCCccCceECCCCcEEEEEEeCEEEEE--ECCccccc-eeeEEECCCCEEEE-CCCCcEEEEECCCCCEEEEEE
Confidence 45555543222222 358999999999998 32111000 11257888886532 223333322222334555554
No 337
>3kg8_A CURJ; polyketide synthase, double hotdog fold, dehydratase, lyase; 2.45A {Lyngbya majuscula}
Probab=27.82 E-value=1.2e+02 Score=26.96 Aligned_cols=50 Identities=16% Similarity=0.117 Sum_probs=32.5
Q ss_pred eeeccCCCCCC-CeEEeEEeecceeCCeeeEEEEEEccCCCEEEEEeccce
Q 040957 367 SMWFHRSFRAD-DWLLFVIVSPVASKARGFVSGEMFNTKGELLVSLTQEAL 416 (430)
Q Consensus 367 si~f~~~~~~~-~W~l~~~~~~~~~~gr~~~~~~i~~~~G~lvA~~~Q~~l 416 (430)
.|+++.+.... -|...........++....+..++|++|+.++...-..+
T Consensus 247 ~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~di~l~d~~G~~~~~i~gl~~ 297 (308)
T 3kg8_A 247 KFTFYNSSDNDLLWCYTCGSKDKQSGEKFKADIQLFDQHGQLVAQVIGFEG 297 (308)
T ss_dssp EEEECCCCCCSEEEEEEEEEECSSCTTEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred EEEEEccCCCCcEEEEEEEccCCCCCCcEEEEEEEECCCCCEEEEEeCeEE
Confidence 44566554444 576655554333445567889999999999998765443
No 338
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=27.57 E-value=1.4e+02 Score=26.47 Aligned_cols=70 Identities=13% Similarity=0.134 Sum_probs=42.6
Q ss_pred EEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEecceEEEEecc
Q 040957 33 VKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIALTELTCLVLPH 112 (430)
Q Consensus 33 ~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~~~~~~l~i~~ 112 (430)
..++++|...-........+.+|++|++.+. .. +|++ ..+++|+.+=.. .+.++ +++..++++++.+.+
T Consensus 74 lv~l~PGg~s~~~~h~~EEfiyVleG~l~l~--l~--~g~~----~~L~~Gds~y~p-~~~~H--~~~N~~~Ar~l~V~k 142 (266)
T 4e2q_A 74 LAKMKEMSSSGLPPQDIERLIFVVEGAVTLT--NT--SSSS----KKLTVDSYAYLP-PNFHH--SLDCVESATLVVFER 142 (266)
T ss_dssp EEEECSSEECCCCCTTEEEEEEEEEECEEEE--C----CCC----EEECTTEEEEEC-TTCCC--EEEESSCEEEEEEEE
T ss_pred EEEECcCCcCCCCCCCCeEEEEEEEEEEEEE--EC--CCcE----EEEcCCCEEEEC-CCCCE--EEEeCCCEEEEEEEe
Confidence 5677777663223344679999999999999 21 1232 578888866443 12222 222346788888865
Q ss_pred c
Q 040957 113 E 113 (430)
Q Consensus 113 ~ 113 (430)
.
T Consensus 143 ~ 143 (266)
T 4e2q_A 143 R 143 (266)
T ss_dssp E
T ss_pred E
Confidence 4
No 339
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=27.56 E-value=1.1e+02 Score=26.28 Aligned_cols=68 Identities=10% Similarity=-0.035 Sum_probs=40.9
Q ss_pred EEEecC-CCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEecceEEEEe
Q 040957 33 VKRYGK-GEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIALTELTCLVL 110 (430)
Q Consensus 33 ~~~~~~-ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~~~~~~l~i 110 (430)
...+++ |..+-..-.....+++|++|.+.+. .. ++ ...+.+||.+--. .+.++.+....-+++.++.+
T Consensus 149 ~~~~~p~g~~~~~H~H~~~e~~~Vl~G~~~~~--i~---~~----~~~l~~Gd~i~ip-~~~~H~~~n~~~~~~~~l~v 217 (243)
T 3h7j_A 149 LAKIPGNGGEMPFHKHRNEQIGICIGGGYDMT--VE---GC----TVEMKFGTAYFCE-PREDHGAINRSEKESKSINI 217 (243)
T ss_dssp EEEECTTTEEEEEECCSSEEEEEECSSCEEEE--ET---TE----EEEECTTCEEEEC-TTCCEEEEECSSSCEEEEEE
T ss_pred EEEECCCCCcCCCEeCCCcEEEEEEECEEEEE--EC---CE----EEEECCCCEEEEC-CCCcEEeEeCCCCCEEEEEE
Confidence 445788 7766554455678999999999998 32 22 2468999876443 22333333222345655554
No 340
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=27.26 E-value=61 Score=25.98 Aligned_cols=53 Identities=6% Similarity=-0.078 Sum_probs=32.9
Q ss_pred cCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEecceEEEEecc
Q 040957 48 IGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIALTELTCLVLPH 112 (430)
Q Consensus 48 ~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~~~~~~l~i~~ 112 (430)
..+.+++|++|.+.+. . +| + ...+++||.+=-. .+.+.. ..+.++++++.+-.
T Consensus 83 ~~eE~~yVLeG~~~l~--i---~g-~---~~~l~~GD~i~iP-~G~~h~--~~n~~~a~~l~V~~ 135 (151)
T 4axo_A 83 NYDEIDYVIDGTLDII--I---DG-R---KVSASSGELIFIP-KGSKIQ--FSVPDYARFIYVTY 135 (151)
T ss_dssp SSEEEEEEEEEEEEEE--E---TT-E---EEEEETTCEEEEC-TTCEEE--EEEEEEEEEEEEEE
T ss_pred CCcEEEEEEEeEEEEE--E---CC-E---EEEEcCCCEEEEC-CCCEEE--EEeCCCEEEEEEEC
Confidence 3567899999999999 3 22 2 3578999866432 222233 33336777766654
No 341
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=26.74 E-value=31 Score=32.67 Aligned_cols=49 Identities=16% Similarity=0.199 Sum_probs=34.2
Q ss_pred eEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeecc
Q 040957 32 IVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGH 88 (430)
Q Consensus 32 ~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe 88 (430)
....+++|+.+-..-.....+|||++|....+ .. +|++ ..+++||+|--
T Consensus 126 ~~~~l~PG~~~~~HrH~~~ev~~IleG~G~~t--~v--~G~~----~~~~~GD~i~~ 174 (394)
T 3bu7_A 126 GIQTMKAGERAGAHRHAASALRFIMEGSGAYT--IV--DGHK----VELGANDFVLT 174 (394)
T ss_dssp EEEEECTTCBCCCEEESSCEEEEEEECSCEEE--EE--TTEE----EEECTTCEEEE
T ss_pred EEEEECCCCCcCCccCCcceEEEEEEeeEEEE--EE--CCEE----EEEcCCCEEEE
Confidence 56788888887655445568999999987654 22 3333 56889987754
No 342
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=25.75 E-value=1.5e+02 Score=26.34 Aligned_cols=70 Identities=14% Similarity=0.074 Sum_probs=50.3
Q ss_pred ceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEecceEEEEe
Q 040957 31 VIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIALTELTCLVL 110 (430)
Q Consensus 31 ~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~~~~~~l~i 110 (430)
+++.-|.+|+.+..+... +.++.+++|+..++ . ++. ...+..||.+= -.....++..+.++|..+.|
T Consensus 209 teV~l~G~Ges~~~~~~~-d~wiWqLEGss~Vt--~---~~q----~~~L~~~DsLL---Ipa~~~y~~~r~~gsv~L~I 275 (286)
T 2qnk_A 209 TQVIAYGQGSSEGLRQNV-DVWLWQLEGSSVVT--M---GGR----RLSLAPDDSLL---VLAGTSYAWERTQGSVALSV 275 (286)
T ss_dssp EEEEEECSEEEEECCCSS-CEEEEEEESCEEEE--E---TTE----EEEECTTEEEE---ECTTCCEEEEECTTCEEEEE
T ss_pred eEEEEEcCCccccccCcC-cEEEEEEcCceEEE--E---CCe----EEeccCCCEEE---ecCCCeEEEEecCCeEEEEE
Confidence 456678999999888887 99999999999877 2 222 24566665332 22334677888899999998
Q ss_pred ccc
Q 040957 111 PHE 113 (430)
Q Consensus 111 ~~~ 113 (430)
..+
T Consensus 276 ~~~ 278 (286)
T 2qnk_A 276 TQD 278 (286)
T ss_dssp EEC
T ss_pred EEC
Confidence 765
No 343
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=25.21 E-value=60 Score=30.70 Aligned_cols=50 Identities=12% Similarity=0.084 Sum_probs=37.8
Q ss_pred ceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCe
Q 040957 31 VIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDY 85 (430)
Q Consensus 31 ~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~ 85 (430)
+....+++|..+...-...+.+++|++|..++. ..+.++. ....+.+||+
T Consensus 54 ~~~~~l~pgg~~~ph~~~a~ei~yVl~G~~~v~--~v~~~~~---~~~~l~~GDv 103 (397)
T 2phl_A 54 LVEFRSKPETLLLPQQADAELLLVVRSGSAILV--LVKPDDR---REYFFLTSDN 103 (397)
T ss_dssp EEEEEECSSEEEEEEEESEEEEEEEEESEEEEE--EEETTTE---EEEEEEESSC
T ss_pred EEEEEECCCcCccCEecCCCeEEEEEeeeEEEE--EEeCCCc---EEEEECCCCc
Confidence 446688999887766566789999999999998 4443333 2578999998
No 344
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=24.80 E-value=1.2e+02 Score=21.80 Aligned_cols=54 Identities=7% Similarity=0.122 Sum_probs=33.7
Q ss_pred CeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEecceEEEEecccc
Q 040957 50 EGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIALTELTCLVLPHEH 114 (430)
Q Consensus 50 ~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~~~~~~l~i~~~~ 114 (430)
..+++|++|.+.+. .. +++ ...+.+||++=-. .+.++.. .+.+++.++.+....
T Consensus 49 ~E~~~Vl~G~~~~~--~~---~~~---~~~l~~Gd~~~ip-~~~~H~~--~~~~~~~~l~i~~~~ 102 (107)
T 2i45_A 49 DKVLFAVEGDMAVD--FA---DGG---SMTIREGEMAVVP-KSVSHRP--RSENGCSLVLIELSD 102 (107)
T ss_dssp CEEEEESSSCEEEE--ET---TSC---EEEECTTEEEEEC-TTCCEEE--EEEEEEEEEEEECC-
T ss_pred CEEEEEEeCEEEEE--EC---CCc---EEEECCCCEEEEC-CCCcEee--EeCCCeEEEEEECCC
Confidence 78999999999988 32 212 3578898876332 2333333 234577777776543
No 345
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=24.58 E-value=90 Score=27.55 Aligned_cols=69 Identities=10% Similarity=0.122 Sum_probs=40.4
Q ss_pred eEEEecCCCEEEe-CCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEe-cceEEEE
Q 040957 32 IVKRYGKGEYVVR-DGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIAL-TELTCLV 109 (430)
Q Consensus 32 ~~~~~~~ge~i~~-~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~-~~~~~l~ 109 (430)
....+++|..+-. .-.....+++|++|.+.+. . + ++ ...+++||++=-. .+.++.+..... +++.++.
T Consensus 185 ~~~~l~pg~~~~~~H~H~~~E~~yVl~G~~~~~--i---~-~~---~~~l~~GD~i~i~-~~~~H~~~n~~~~~~~~~l~ 254 (274)
T 1sef_A 185 HILSFEPGASHAYIETHVQEHGAYLISGQGMYN--L---D-NE---WYPVEKGDYIFMS-AYVPQAAYAVGREEPLMYVY 254 (274)
T ss_dssp EEEEECTTCBCSSCBCCSCCEEEEEEECEEEEE--E---T-TE---EEEEETTCEEEEC-TTCCEEEEEECSSSCEEEEE
T ss_pred EEEEECCCCccCcceeccCeEEEEEEeCEEEEE--E---C-CE---EEEECCCCEEEEC-CCCCEEEEeCCCCCCEEEEE
Confidence 3456788876533 3335678999999999998 3 2 22 3578999876332 233333333223 4455544
Q ss_pred e
Q 040957 110 L 110 (430)
Q Consensus 110 i 110 (430)
+
T Consensus 255 ~ 255 (274)
T 1sef_A 255 S 255 (274)
T ss_dssp E
T ss_pred E
Confidence 4
No 346
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=24.49 E-value=53 Score=30.73 Aligned_cols=50 Identities=16% Similarity=0.191 Sum_probs=34.8
Q ss_pred ceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeecc
Q 040957 31 VIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGH 88 (430)
Q Consensus 31 ~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe 88 (430)
+.+..+++|+.+-..-.....+|+|++|.-..+ .. +|.+ ..+++||+|=-
T Consensus 105 a~~~~l~PG~~~~~HrH~~~ev~~VleG~G~~~--~v--dG~~----~~~~~GD~v~i 154 (368)
T 3nw4_A 105 AAIQYLGPRETAPEHRHSQNAFRFVVEGEGVWT--VV--NGDP----VRMSRGDLLLT 154 (368)
T ss_dssp EEEEEECTTCEEEEEEESSCEEEECSSCEEEEE--EE--TTEE----EEEETTCEEEE
T ss_pred EEEEEECCCCccCceecccceEEEEEecceEEE--EE--CCEE----EEEeCCCEEEE
Confidence 345778889888765555679999999997533 12 4433 56888987744
No 347
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=24.47 E-value=55 Score=30.96 Aligned_cols=71 Identities=13% Similarity=0.102 Sum_probs=39.7
Q ss_pred EEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEE-ecceEEEEec
Q 040957 33 VKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIA-LTELTCLVLP 111 (430)
Q Consensus 33 ~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A-~~~~~~l~i~ 111 (430)
...+++|+..-..-.....+|+|++|...+. . +|. ...+++||+|-.- .+..+...-.. .+++.++++.
T Consensus 298 ~~~l~PG~~~~~HrH~~~~v~~VleG~G~~~--V---~ge----~~~~~~GD~~~iP-~g~~H~~~N~g~~e~~~ll~i~ 367 (394)
T 3bu7_A 298 MQMLRPGEHTKAHRHTGNVIYNVAKGQGYSI--V---GGK----RFDWSEHDIFCVP-AWTWHEHCNTQERDDACLFSFN 367 (394)
T ss_dssp EEEECTTCBCCCEEESSCEEEEEEECCEEEE--E---TTE----EEEECTTCEEEEC-TTCCEEEEECCSSCCEEEEEEE
T ss_pred EEEECCCCcCCCcccCCcEEEEEEeCeEEEE--E---CCE----EEEEeCCCEEEEC-CCCeEEeEeCCCCCCeEEEEee
Confidence 3444555554433334567999999998666 2 222 3578999987553 11122211111 3467777775
Q ss_pred cc
Q 040957 112 HE 113 (430)
Q Consensus 112 ~~ 113 (430)
..
T Consensus 368 D~ 369 (394)
T 3bu7_A 368 DF 369 (394)
T ss_dssp SH
T ss_pred CH
Confidence 43
No 348
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=24.39 E-value=81 Score=25.11 Aligned_cols=53 Identities=9% Similarity=0.146 Sum_probs=31.1
Q ss_pred EEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccc--cCCcceEEeccCCeec
Q 040957 33 VKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAE--EEDRPEFQLKRYDYFG 87 (430)
Q Consensus 33 ~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g--~~~~~~~~~~~G~~fG 87 (430)
...+++|..+-..-.....+++|++|.+.+. ..+.++ ..+.....+.+||++=
T Consensus 45 ~~~~~pg~~~~~H~H~~~E~~~Vl~G~~~~~--~~~~~~~~~~~~~~~~l~~Gd~i~ 99 (163)
T 1lr5_A 45 LQTISPGQRTPIHRHSCEEVFTVLKGKGTLL--MGSSSLKYPGQPQEIPFFQNTTFS 99 (163)
T ss_dssp EEEECTTCBCCEEEESSCEEEEEEECCEEEE--ECCSSSSSCCSCEEEEECTTEEEE
T ss_pred EEEECCCCcCCCeECCCCeEEEEEeCEEEEE--ECCccccccCccEEEEeCCCCEEE
Confidence 4456777654222223467999999999998 332110 0112356788998763
No 349
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=23.28 E-value=75 Score=30.30 Aligned_cols=51 Identities=18% Similarity=0.160 Sum_probs=37.5
Q ss_pred EEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeecc
Q 040957 33 VKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGH 88 (430)
Q Consensus 33 ~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe 88 (430)
...+++|.++...--.+..+++|++|...+. ..+.++ .....+.+||+|--
T Consensus 48 ~~~l~p~gl~~Phh~~A~ei~yV~~G~g~~g--~V~~~~---~~~~~l~~GDv~~~ 98 (418)
T 3s7i_A 48 QIEAKPNTLVLPKHADADNILVIQQGQATVT--VANGNN---RKSFNLDEGHALRI 98 (418)
T ss_dssp EEEECTTEEEEEEEESEEEEEEEEESEEEEE--EECSSC---EEEEEEETTEEEEE
T ss_pred EEEecCCceeeeeeCCCCeEEEEEEeeEEEE--EEecCC---EEEEEecCCCEEEE
Confidence 4577888888877555789999999999887 444332 33578899988744
No 350
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=23.21 E-value=1.2e+02 Score=36.95 Aligned_cols=61 Identities=21% Similarity=0.236 Sum_probs=46.0
Q ss_pred eeeecceeeeccCCCC-CCCeEEeEEeeccee---CCe-eeEEEEEE-ccCCCEEEEEeccceeccC
Q 040957 360 ASLSLDHSMWFHRSFR-ADDWLLFVIVSPVAS---KAR-GFVSGEMF-NTKGELLVSLTQEALLRSP 420 (430)
Q Consensus 360 ~~~sld~si~f~~~~~-~~~W~l~~~~~~~~~---~gr-~~~~~~i~-~~~G~lvA~~~Q~~l~r~~ 420 (430)
...=+++.+.+|+|++ .++=+..+.+...+. .|+ .....+++ |.+|++|++.++.-++|..
T Consensus 1131 ~lVH~eq~~~~~rplp~~Gd~l~~~~~v~~v~~~~~G~~v~v~~~i~~d~~Ge~V~~~~st~~~RG~ 1197 (3089)
T 3zen_D 1131 SLVHLDHAARLLAELPKEPAEFTVTAKASAATDTEVGRVVPVSVEVRNAADGALLATLEERFAIRXX 1197 (3089)
T ss_dssp TCEEEEEEEEESSCCCCSSCCEEEEEEECCCEECSSCEEEEEEEEEEETTTTEEEEEEEEEEEESSC
T ss_pred cccccCceEEEeCCCCCCCCEEEEEEEEEEEEEeCCCeEEEEEEEEEECCCCCEEEEEEEeeeeecc
Confidence 4577899999999876 445666666655553 244 44578888 7999999999999999975
No 351
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=23.16 E-value=73 Score=30.84 Aligned_cols=56 Identities=11% Similarity=0.127 Sum_probs=38.0
Q ss_pred hceEEEecCCCEEEeC-CCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeecc
Q 040957 30 IVIVKRYGKGEYVVRD-GDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGH 88 (430)
Q Consensus 30 ~~~~~~~~~ge~i~~~-g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe 88 (430)
.+....+.+|-+.-.- .-.+..+.+|++|.+++. ..+.+|.. .....+.+||+|=-
T Consensus 324 S~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~--~V~~~g~~-~f~~~l~~GDV~v~ 380 (466)
T 3kgl_A 324 SALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQ--VVNDNGDR-VFDGQVSQGQLLSI 380 (466)
T ss_dssp EEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEE--EECTTSCE-EEEEEEETTCEEEE
T ss_pred eeEEEEeecCcEeeeeECCCCCEEEEEEeceEEEE--EEeCCCcE-EEEeEecCCcEEEE
Confidence 3445666776655432 123678999999999998 66556654 55667899998744
No 352
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=22.99 E-value=97 Score=23.18 Aligned_cols=47 Identities=21% Similarity=0.274 Sum_probs=27.9
Q ss_pred EEEecCCCEEE--eCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeecc
Q 040957 33 VKRYGKGEYVV--RDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGH 88 (430)
Q Consensus 33 ~~~~~~ge~i~--~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe 88 (430)
...+++|..+- ..-+....+|+|++|.+.+. . +++ ...+.+||++=-
T Consensus 30 ~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~--i---~~~----~~~l~~Gd~i~i 78 (125)
T 3cew_A 30 INHLPAGAGVPFVHSHKQNEEIYGILSGKGFIT--I---DGE----KIELQAGDWLRI 78 (125)
T ss_dssp EEEECTTCBCSSEEEESSEEEEEEEEEEEEEEE--E---TTE----EEEEETTEEEEE
T ss_pred EEEECCCCCCCCCccCCCceEEEEEEeCEEEEE--E---CCE----EEEeCCCCEEEE
Confidence 45667776542 11122235677999999988 3 222 357888886643
No 353
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=22.84 E-value=67 Score=26.41 Aligned_cols=61 Identities=5% Similarity=0.047 Sum_probs=39.3
Q ss_pred CCeEEEEEeeEEEEEEecccccc---cCCcceEEeccCCeeccCCCCCcceeeEEEecceEEEEecccccc
Q 040957 49 GEGIYFIWEGEAEVSVSDSVQAE---EEDRPEFQLKRYDYFGHGSPTIFRQGDVIALTELTCLVLPHEHCN 116 (430)
Q Consensus 49 ~~~ly~I~~G~v~~~~~~~~~~g---~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~~~~~~l~i~~~~f~ 116 (430)
.+.++++++|.+.+. ..+ +| ++ ..-..+++||+|=-- .+.++ +-++..++..+.|.+..-.
T Consensus 54 ~eE~Fy~lkG~m~l~--v~d-~g~~~~~-~~dv~i~eGdmfllP-~gvpH--sP~r~~e~v~lviErkR~~ 117 (176)
T 1zvf_A 54 TPEWFYQKKGSMLLK--VVD-ETDAEPK-FIDIIINEGDSYLLP-GNVPH--SPVRFADTVGIVVEQDRPG 117 (176)
T ss_dssp SCEEEEEEESCEEEE--EEE-CSSSSCE-EEEEEECTTEEEEEC-TTCCE--EEEECTTCEEEEEEECCCS
T ss_pred CceEEEEEeCEEEEE--EEc-CCCcccc-eeeEEECCCCEEEcC-CCCCc--CCcccCCcEEEEEEecCCC
Confidence 458999999999998 432 22 11 334578999887553 22222 3333578999999876543
No 354
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=22.82 E-value=1.3e+02 Score=23.01 Aligned_cols=32 Identities=9% Similarity=-0.052 Sum_probs=20.5
Q ss_pred CCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeec
Q 040957 49 GEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFG 87 (430)
Q Consensus 49 ~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fG 87 (430)
...+++|++|.+.+. ... +++ ...+.+||++=
T Consensus 59 ~~e~~~vl~G~~~~~--~~~-~~~----~~~l~~Gd~~~ 90 (145)
T 3ht1_A 59 WEHEIYVLEGSMGLV--LPD-QGR----TEEVGPGEAIF 90 (145)
T ss_dssp SCEEEEEEEECEEEE--EGG-GTE----EEEECTTCEEE
T ss_pred CceEEEEEEeEEEEE--EeE-CCE----EEEECCCCEEE
Confidence 445667999999877 211 222 35788888653
No 355
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=22.55 E-value=1.1e+02 Score=24.84 Aligned_cols=69 Identities=7% Similarity=-0.088 Sum_probs=42.0
Q ss_pred ceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEec----ceE
Q 040957 31 VIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIALT----ELT 106 (430)
Q Consensus 31 ~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~~----~~~ 106 (430)
+...++++|..+-.-........+|++|.++.. ++.. ..+.+|+++=+- ....-+..+.+ +|.
T Consensus 45 v~lvr~~pG~~~p~H~H~g~ee~~VL~G~f~~~------~~~~----~~~~aGd~~~~P---~g~~H~~~a~~~~~~gci 111 (165)
T 3cjx_A 45 VMRASFAPGLTLPLHFHTGTVHMYTISGCWYYT------EYPG----QKQTAGCYLYEP---GGSIHQFNTPRDNEGQTE 111 (165)
T ss_dssp EEEEEECTTCBCCEEEESSCEEEEEEESEEEET------TCTT----SCEETTEEEEEC---TTCEECEECCTTCSSCEE
T ss_pred EEEEEECCCCcCCcccCCCCEEEEEEEEEEEEC------CCce----EEECCCeEEEeC---CCCceeeEeCCCCCCCcE
Confidence 456778888887766666788889999997653 2111 246778776553 11123344444 675
Q ss_pred EEEecc
Q 040957 107 CLVLPH 112 (430)
Q Consensus 107 ~l~i~~ 112 (430)
++.+-.
T Consensus 112 ~l~v~~ 117 (165)
T 3cjx_A 112 VIFMLS 117 (165)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 555433
No 356
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=22.47 E-value=1.1e+02 Score=26.98 Aligned_cols=48 Identities=10% Similarity=0.188 Sum_probs=34.8
Q ss_pred ceEEEecCCCEEE-eCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeec
Q 040957 31 VIVKRYGKGEYVV-RDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFG 87 (430)
Q Consensus 31 ~~~~~~~~ge~i~-~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fG 87 (430)
+.+.++++|..|= .+-....+-++|++|...+. . +++ ...+++||++=
T Consensus 188 ~~~~t~~PG~~~p~~e~H~~eh~~~vL~G~g~y~--l----~~~---~~~V~~GD~i~ 236 (266)
T 4e2q_A 188 IHTMDFQPGEFLNVKEVHYNQHGLLLLEGQGIYR--L----GDN---WYPVQAGDVIW 236 (266)
T ss_dssp EEEEEECTTCBCSSCCCCSCCEEEEEEECEEEEE--E----TTE---EEEEETTCEEE
T ss_pred EEEEEECCCcCcCCceEcccceEEEEEeceEEEE--E----CCE---EEEecCCCEEE
Confidence 4567799999884 45556679999999998888 2 222 45678888653
No 357
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=21.16 E-value=1.3e+02 Score=29.06 Aligned_cols=34 Identities=9% Similarity=0.026 Sum_probs=27.3
Q ss_pred hceEEEecCCCEEEeCCCcCCeEEEEEeeEEEEE
Q 040957 30 IVIVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVS 63 (430)
Q Consensus 30 ~~~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~ 63 (430)
.+....+++|.++...=.....+++|++|...+.
T Consensus 49 s~~r~~l~Pggl~~Ph~~~a~ei~yV~~G~g~~g 82 (476)
T 1fxz_A 49 ALSRCTLNRNALRRPSYTNGPQEIYIQQGKGIFG 82 (476)
T ss_dssp EEEEEEECTTEEEEEEEESSCEEEEEEECCEEEE
T ss_pred EEEEEEEcCCCEecceecCCceEEEEEecEEEEE
Confidence 3445788999888766556889999999999888
No 358
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=20.90 E-value=92 Score=30.13 Aligned_cols=57 Identities=7% Similarity=-0.039 Sum_probs=38.8
Q ss_pred hceEEEecCCCEEEeC-CCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccC
Q 040957 30 IVIVKRYGKGEYVVRD-GDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHG 89 (430)
Q Consensus 30 ~~~~~~~~~ge~i~~~-g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~ 89 (430)
.+....+.+|-+.-.- .-.+..+.+|++|.+++. ..+.+|.. ..-..+.+||+|=-.
T Consensus 324 S~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~--vV~~~g~~-~f~~~l~~GDVfvvP 381 (465)
T 3qac_A 324 SAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQ--IVNDQGQS-VFDEELSRGQLVVVP 381 (465)
T ss_dssp EEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEE--EECTTSCE-EEEEEEETTCEEEEC
T ss_pred eEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEE--EEeCCCcE-EEEEEecCCeEEEEC
Confidence 3455677777766432 223678999999999998 55555554 444568999987543
No 359
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=20.56 E-value=99 Score=29.22 Aligned_cols=71 Identities=20% Similarity=0.069 Sum_probs=41.0
Q ss_pred EEecCCCEEEeC-CCcCCeEEEEEeeEEEEEEecccc------cccCCcceEEeccCCeeccCCCCCcceeeEEEecceE
Q 040957 34 KRYGKGEYVVRD-GDIGEGIYFIWEGEAEVSVSDSVQ------AEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIALTELT 106 (430)
Q Consensus 34 ~~~~~ge~i~~~-g~~~~~ly~I~~G~v~~~~~~~~~------~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~~~~~ 106 (430)
..+.+|.+...- .-.+..+++|++|..++. .... ++.+ .....+.+||+|=-- ......+++.+++.
T Consensus 244 v~l~pG~~~~PH~h~~A~Ei~yVl~G~g~v~--vv~~~~~~~~~g~~-~~~~~l~~GDV~vvP---~G~~h~~~n~~~l~ 317 (397)
T 2phl_A 244 IEMEEGALFVPHYYSKAIVILVVNEGEAHVE--LVGPKGNKETLEYE-SYRAELSKDDVFVIP---AAYPVAIKATSNVN 317 (397)
T ss_dssp EEECTTEEEEEEEESSCEEEEEEEESEEEEE--EEEECC--CCSCEE-EEEEEEETTCEEEEC---TTCCEEEEESSSEE
T ss_pred EEEcCCcEeeeeEcCCCCEEEEEEeeeEEEE--EEeccccccCCCce-EEEEEecCCCEEEEC---CCCeEEEEeCCCeE
Confidence 345555444322 123578999999999988 4443 3333 455678888877443 11123344445666
Q ss_pred EEEe
Q 040957 107 CLVL 110 (430)
Q Consensus 107 ~l~i 110 (430)
++.+
T Consensus 318 ~l~f 321 (397)
T 2phl_A 318 FTGF 321 (397)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6665
No 360
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=20.54 E-value=1.4e+02 Score=26.06 Aligned_cols=69 Identities=9% Similarity=0.023 Sum_probs=39.6
Q ss_pred EEEecCCCEEEeCC--CcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEecceEEEEe
Q 040957 33 VKRYGKGEYVVRDG--DIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIALTELTCLVL 110 (430)
Q Consensus 33 ~~~~~~ge~i~~~g--~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~~~~~~l~i 110 (430)
...+++|...-..- ...+.+++|++|.+++. . ++ + ...+++||.+--- .+.++...-..-++++++.+
T Consensus 63 ~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~--~---~~-~---~~~L~~Gd~~~~~-~~~~H~~~N~~~~~~~~l~v 132 (261)
T 1rc6_A 63 LVTLHQNGGNQQGFGGEGIETFLYVISGNITAK--A---EG-K---TFALSEGGYLYCP-PGSLMTFVNAQAEDSQIFLY 132 (261)
T ss_dssp EEEEEEEEEESSCSCCTTEEEEEEEEESEEEEE--E---TT-E---EEEEETTEEEEEC-TTCCCEEEECSSSCEEEEEE
T ss_pred EEEEcCCCccCCCCCCCCceEEEEEEEeEEEEE--E---CC-E---EEEECCCCEEEEC-CCCCEEEEeCCCCCEEEEEE
Confidence 35566665543221 22467899999999998 3 22 2 3578999866432 22333333333356777766
Q ss_pred c
Q 040957 111 P 111 (430)
Q Consensus 111 ~ 111 (430)
.
T Consensus 133 ~ 133 (261)
T 1rc6_A 133 K 133 (261)
T ss_dssp E
T ss_pred E
Confidence 4
No 361
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=20.50 E-value=2.2e+02 Score=26.21 Aligned_cols=53 Identities=17% Similarity=0.150 Sum_probs=34.1
Q ss_pred cCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEecceEEEEecc
Q 040957 48 IGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIALTELTCLVLPH 112 (430)
Q Consensus 48 ~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~~~~~~l~i~~ 112 (430)
....+|+|++|..++. . ++ + ...+.+||+|--- .... ..+.+.+++.++++.-
T Consensus 287 ~~~ev~~v~~G~g~~~--v---~~-~---~~~~~~GD~~~vP-~~~~--H~~~n~e~~~l~~~~d 339 (354)
T 2d40_A 287 TDSTIYHVVEGSGQVI--I---GN-E---TFSFSAKDIFVVP-TWHG--VSFQTTQDSVLFSFSD 339 (354)
T ss_dssp SSCEEEEEEEEEEEEE--E---TT-E---EEEEETTCEEEEC-TTCC--EEEEEEEEEEEEEEES
T ss_pred CCcEEEEEEeCeEEEE--E---CC-E---EEEEcCCCEEEEC-CCCe--EEEEeCCCEEEEEEcC
Confidence 4557999999999998 3 22 2 3578899986543 1111 2334457788887754
No 362
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=20.33 E-value=64 Score=29.96 Aligned_cols=72 Identities=13% Similarity=0.031 Sum_probs=41.8
Q ss_pred eEEEecCCCEEEeCCCcCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeeccCCCCCcceeeEEEecceEEEEec
Q 040957 32 IVKRYGKGEYVVRDGDIGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGHGSPTIFRQGDVIALTELTCLVLP 111 (430)
Q Consensus 32 ~~~~~~~ge~i~~~g~~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe~~~~~~~~~~v~A~~~~~~l~i~ 111 (430)
....+++|+..-.--.....+++|++|...+. .. +++ ...+++||+|=-- .+.++......-+++.++.+.
T Consensus 103 ~~~~l~PG~~~~~H~H~~~e~~yVl~G~g~~t--~v--~g~----~~~l~~GD~~~iP-~g~~H~~~n~~~~~~~~l~v~ 173 (354)
T 2d40_A 103 GLQLIMPGEVAPSHRHNQSALRFIVEGKGAFT--AV--DGE----RTPMNEGDFILTP-QWRWHDHGNPGDEPVIWLDGL 173 (354)
T ss_dssp EEEEECTTCEEEEEEESSCEEEEEEECSSCEE--EE--TTE----EEECCTTCEEEEC-TTSCEEEECCSSSCEEEEEEE
T ss_pred EEEEECCCCCcCCeecCcceEEEEEEEEEEEE--EE--CCE----EEEEcCCCEEEEC-CCCcEEeEeCCCCCEEEEEEE
Confidence 35677888876443345678999999998773 22 332 3578999987432 222222222223456666664
Q ss_pred c
Q 040957 112 H 112 (430)
Q Consensus 112 ~ 112 (430)
.
T Consensus 174 d 174 (354)
T 2d40_A 174 D 174 (354)
T ss_dssp C
T ss_pred C
Confidence 3
No 363
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=20.25 E-value=1.2e+02 Score=26.37 Aligned_cols=48 Identities=15% Similarity=0.101 Sum_probs=31.5
Q ss_pred eEEEecCCCEEEeCCC-cCCeEEEEEeeEEEEEEecccccccCCcceEEeccCCeecc
Q 040957 32 IVKRYGKGEYVVRDGD-IGEGIYFIWEGEAEVSVSDSVQAEEEDRPEFQLKRYDYFGH 88 (430)
Q Consensus 32 ~~~~~~~ge~i~~~g~-~~~~ly~I~~G~v~~~~~~~~~~g~~~~~~~~~~~G~~fGe 88 (430)
....+++|..+-..-. ....+++|++|.+.+. . + ++ ...+.+||++=-
T Consensus 182 ~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~--i---~-~~---~~~l~~GD~i~~ 230 (261)
T 1rc6_A 182 HILSFAPGASHGYIETHVQEHGAYILSGQGVYN--L---D-NN---WIPVKKGDYIFM 230 (261)
T ss_dssp EEEEECTTCCBEEEEEESSCEEEEEEESEEEEE--S---S-SC---EEEEETTCEEEE
T ss_pred EEEEECCCCccCcccCCCceEEEEEEEeEEEEE--E---C-CE---EEEeCCCCEEEE
Confidence 4567778775432222 3467999999999998 3 2 22 357889986633
Done!