Query 040959
Match_columns 391
No_of_seqs 120 out of 466
Neff 3.4
Searched_HMMs 29240
Date Mon Mar 25 03:17:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040959.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040959hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w7d_A Fasciclin-like protein; 99.9 7.4E-27 2.5E-31 197.4 2.3 125 35-173 4-137 (137)
2 2vxp_A Transforming growth fac 99.9 6.8E-26 2.3E-30 190.4 4.7 123 35-170 3-132 (132)
3 1nyo_A Immunogenic protein MPT 99.9 2.9E-25 9.9E-30 194.1 6.5 139 19-173 13-163 (163)
4 1o70_A Fasciclin I, FAS I, FCN 99.8 1.8E-20 6E-25 176.6 7.7 123 42-173 21-158 (324)
5 1o70_A Fasciclin I, FAS I, FCN 99.8 6.9E-20 2.4E-24 172.5 5.9 133 36-176 161-314 (324)
6 3mkv_A Putative amidohydrolase 17.6 91 0.0031 26.4 3.3 35 350-388 373-411 (426)
7 3mtw_A L-arginine carboxypepti 13.9 1.5E+02 0.005 25.0 3.6 35 350-388 366-400 (403)
8 3be7_A Zn-dependent arginine c 13.7 1.4E+02 0.0046 27.4 3.6 49 337-389 348-399 (408)
9 2jy5_A Ubiquilin-1; UBA, alter 13.0 2E+02 0.0067 20.6 3.6 31 25-55 4-37 (52)
10 3gnh_A L-lysine, L-arginine ca 11.4 1.8E+02 0.0061 26.4 3.6 36 350-389 366-401 (403)
No 1
>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A
Probab=99.92 E-value=7.4e-27 Score=197.36 Aligned_cols=125 Identities=25% Similarity=0.314 Sum_probs=106.3
Q ss_pred HHHHHHHh-CChHHHHHHHHhcCchhhccCCCCeEEEccCChhhccCC------CCC--ChhHHHhcccccccCCccCHH
Q 040959 35 AVLLLLHA-GGHTLFANAIATSDLLFDLLSLPSLTLFAPTDPSLFAVD------MTQ--TPPFYLSILRLHVLPLRLSWT 105 (391)
Q Consensus 35 ~IietLrs-~GytsfA~AL~aAgLl~~Ll~~gpfTIFAPTDeAF~ald------L~~--n~~~L~sVLrYHVVPGrLs~s 105 (391)
++++.|++ .+|+.|+.+|+++||.+.|...+++|||||+|+||.++. +.. +.+.|+++|+|||+||++..+
T Consensus 4 ~i~~~l~~~~~~s~f~~~l~~agl~~~L~~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~~~l~~lL~yHvv~~~~~~~ 83 (137)
T 1w7d_A 4 DIVETATGAGSFTTLLTAAEAAGLVDTLKGDGPFTVFAPTDAAFAALPEGTVEDLLKPENKEKLTEILTYHVVPGEVMSS 83 (137)
T ss_dssp TTGGGGGSCSSSTTTTHHHHHTTTHHHHTSSSCEEEECCCHHHHTTSTTTHHHHTTSHHHHHHHHHHHHHHEEESCCCTT
T ss_pred CHHHHHHhCCCHHHHHHHHHHcCCHHHHcCCCCEEEEEECHHHHHHcCHhHHHHHhCcCCHHHHHHHHHhhEeCcEEcHH
Confidence 45677764 679999999999999998988899999999999999852 222 678899999999999999988
Q ss_pred HHHhhcCCCCCCCCCCeeccccCCCeEEEEEcCCCcEEEccEEEeCCCccccCCEEEEEeCccccCCC
Q 040959 106 ELLQLISPSNNNNNSSRLPTLLPSRDLHVTRGDSGALLVGGVQVVMPGLYYSSYVAVHGLAGILTFRS 173 (391)
Q Consensus 106 DL~~Li~~~~~~pnGTtLpTLL~G~~LtVT~~sgg~V~VNgVkVV~PDI~~ssNGVVHGIDgVLlP~S 173 (391)
+| ..|..++|+ .|+.|.|+.. ++ ++|||++|+.+|+.. +|||||+||+||+|.+
T Consensus 84 ~l----------~~~~~~~tl-~G~~l~v~~~-~g-v~vn~a~v~~~di~~-~NGvIHvID~VL~P~s 137 (137)
T 1w7d_A 84 DL----------TEGMTAETV-EGGALTVTLE-GG-PKVNGVSISQPDVDA-SNGVIHVIDGVLMPGA 137 (137)
T ss_dssp TS----------CSSEEEECT-TSCEEEEECT-TS-CEETTEECSBCCCBC-SSSEEEBCSSCCSSCC
T ss_pred Hh----------cCCCeeecc-CCceEEEEec-CC-EEEeCcEEEECCeec-CCeEEEEECeeeCCCC
Confidence 76 335678884 7899999984 66 999999999999976 5899999999999964
No 2
>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A
Probab=99.92 E-value=6.8e-26 Score=190.39 Aligned_cols=123 Identities=22% Similarity=0.260 Sum_probs=104.5
Q ss_pred HHHHHHHh-CChHHHHHHHHhcCchhhccCCCCeEEEccCChhhccCC------CCCChhHHHhcccccccCCccCHHHH
Q 040959 35 AVLLLLHA-GGHTLFANAIATSDLLFDLLSLPSLTLFAPTDPSLFAVD------MTQTPPFYLSILRLHVLPLRLSWTEL 107 (391)
Q Consensus 35 ~IietLrs-~GytsfA~AL~aAgLl~~Ll~~gpfTIFAPTDeAF~ald------L~~n~~~L~sVLrYHVVPGrLs~sDL 107 (391)
++++.|++ .+|+.|+.+|+++||.+.|...+++|||||+|+||.++. +..+.+.|+++|+|||+|+.+..++|
T Consensus 3 ti~~~l~~~~~fs~~~~~l~~agl~~~L~~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~l~~iL~yHvv~~~~~~~~l 82 (132)
T 2vxp_A 3 TVMDVLKGDNRFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFRALPPRERSRLLGDAKELANILKYHIGDEILVSGGI 82 (132)
T ss_dssp CHHHHHTTSTTCHHHHHHHHHHTCHHHHHSSCCEEEEEECHHHHHHSCHHHHHHHHTCHHHHHHHHHHSBBSSCCCSTTC
T ss_pred cHHHHHHcCCCHHHHHHHHHHcCcHHHHcCCCCEEEEeECHHHHHhhCHHHHHHHhcCHHHHHHHHHhcCcCceeehhhc
Confidence 46788875 679999999999999988888899999999999998852 12478899999999999999887665
Q ss_pred HhhcCCCCCCCCCCeeccccCCCeEEEEEcCCCcEEEccEEEeCCCccccCCEEEEEeCcccc
Q 040959 108 LQLISPSNNNNNSSRLPTLLPSRDLHVTRGDSGALLVGGVQVVMPGLYYSSYVAVHGLAGILT 170 (391)
Q Consensus 108 ~~Li~~~~~~pnGTtLpTLL~G~~LtVT~~sgg~V~VNgVkVV~PDI~~ssNGVVHGIDgVLl 170 (391)
..+..++|+ .|+.|.|+.. ++.++||+++|+.+|+.. +|||||+||+||+
T Consensus 83 ----------~~~~~~~tl-~G~~l~v~~~-~~~v~vn~a~v~~~di~a-~NGvIHvID~VLl 132 (132)
T 2vxp_A 83 ----------GALVRLKSL-QGDKLEVSLK-NNVVSVNKEPVAEPDIMA-TNGVVHVITNVLQ 132 (132)
T ss_dssp ----------SSCEEEEBT-TSSEEEEEEE-TTEEEESSCBEEEEEEEE-TTEEEEEESSCC-
T ss_pred ----------cCCceEecC-CCCEEEEEEe-CCEEEEeccEEEEcceec-CCEEEEEECcEeC
Confidence 335678885 7899999984 788999999999999986 5899999999985
No 3
>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1
Probab=99.91 E-value=2.9e-25 Score=194.13 Aligned_cols=139 Identities=24% Similarity=0.287 Sum_probs=113.7
Q ss_pred hhcCCCCCCCCchhHHHHHHHHHh-CChHHHHHHHH-----hcCchhhccCCCCeEEEccCChhhccCC------CCCCh
Q 040959 19 LCFPTTPAGIPTSDLDAVLLLLHA-GGHTLFANAIA-----TSDLLFDLLSLPSLTLFAPTDPSLFAVD------MTQTP 86 (391)
Q Consensus 19 ~~~~stsas~p~~ele~IietLrs-~GytsfA~AL~-----aAgLl~~Ll~~gpfTIFAPTDeAF~ald------L~~n~ 86 (391)
-|.++-+.+.....-.++.+.|++ .+|+.|+.+|+ ++||.+.|...+ +|||||+|+||.++. +..++
T Consensus 13 ~~~~~~pg~~~g~~~~~i~~~l~~~~~~s~f~~~l~~~~~~~agl~~~L~~~g-~TvFAPtn~AF~~l~~~~~~~L~~~~ 91 (163)
T 1nyo_A 13 AANPTGPASVQGMSQDPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLNSGQ-YTVFAPTNAAFSKLPASTIDELKTNS 91 (163)
T ss_dssp HHCSSSTTSTTHHHHSCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHTSSS-EEECCBCHHHHHHSCHHHHHHHTTCS
T ss_pred cCCCCCCCCCCCCCCcCHHHHHHhCCCHHHHHHHHHhccccccCHHHHhCCCC-cEEEEECHHHHHhccHHHHHHHhcCH
Confidence 354444444444455678888875 56999999999 999998888878 999999999998852 22367
Q ss_pred hHHHhcccccccCCccCHHHHHhhcCCCCCCCCCCeeccccCCCeEEEEEcCCCcEEEccEEEeCCCccccCCEEEEEeC
Q 040959 87 PFYLSILRLHVLPLRLSWTELLQLISPSNNNNNSSRLPTLLPSRDLHVTRGDSGALLVGGVQVVMPGLYYSSYVAVHGLA 166 (391)
Q Consensus 87 ~~L~sVLrYHVVPGrLs~sDL~~Li~~~~~~pnGTtLpTLL~G~~LtVT~~sgg~V~VNgVkVV~PDI~~ssNGVVHGID 166 (391)
+.|+++|+|||++|++..++|. | .++|+ .|+.|.|+. .++.++||+++|+.+|+.. +|||||+||
T Consensus 92 ~~L~~iL~yHvv~g~~~~~~l~-----------g-~~~Tl-~G~~l~v~~-~~~~v~vn~a~V~~~di~a-~NGvIHvID 156 (163)
T 1nyo_A 92 SLLTSILTYHVVAGQTSPANVV-----------G-TRQTL-QGASVTVTG-QGNSLKVGNADVVCGGVST-ANATVYMID 156 (163)
T ss_dssp SHHHHHHHHTEEESCCCTTTSC-----------E-EEECT-TSSEEEEEE-CSSCEEETTEECSSBCCCC-SSEEEBCBS
T ss_pred HHHHHHHHhceECCEEcHHHhC-----------C-ccccC-CCCEEEEEE-ECCEEEEeccEEEECceEc-CCEEEEEEC
Confidence 8899999999999999998762 2 57885 799999998 4778999999999999976 589999999
Q ss_pred ccccCCC
Q 040959 167 GILTFRS 173 (391)
Q Consensus 167 gVLlP~S 173 (391)
+||+|.+
T Consensus 157 ~VL~P~~ 163 (163)
T 1nyo_A 157 SVLMPPA 163 (163)
T ss_dssp SCCCCCC
T ss_pred cEeCCCC
Confidence 9999964
No 4
>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1
Probab=99.81 E-value=1.8e-20 Score=176.57 Aligned_cols=123 Identities=22% Similarity=0.285 Sum_probs=99.3
Q ss_pred hCChHHHHHHHHhcC--chhhccCCCCeEEEccCChhhccCCC---CCChhHHHhcccccccCCccCHHHHHhhcCCCCC
Q 040959 42 AGGHTLFANAIATSD--LLFDLLSLPSLTLFAPTDPSLFAVDM---TQTPPFYLSILRLHVLPLRLSWTELLQLISPSNN 116 (391)
Q Consensus 42 s~GytsfA~AL~aAg--Ll~~Ll~~gpfTIFAPTDeAF~aldL---~~n~~~L~sVLrYHVVPGrLs~sDL~~Li~~~~~ 116 (391)
...|+.|+.+|+++| |.+.|...++||||||+|+||.+..+ ..+.+.|+++|+|||++|++..++|...
T Consensus 21 ~~~~s~~~~~l~~ag~~l~~~L~~~~~~TvFAPtn~Af~~~~~~~l~~~~~~l~~iL~yHvv~g~~~~~~l~~~------ 94 (324)
T 1o70_A 21 NGALRKFYEVIMDNGGAVLDDINSLTEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHIIKDRLNVDKIRQK------ 94 (324)
T ss_dssp HHHHHHHHHHHHHTCSHHHHHHHTCSSEEEEEECHHHHHHTCTHHHHTCHHHHHHHHHHTEESSCCCHHHHHHH------
T ss_pred CCcHHHHHHHHHHHhHHHHHHHcCCCCeEEEEEChHhhhcccHhhhhCCHHHHHHHHHhcEeCCeecHHHHhhc------
Confidence 456999999999999 88888888999999999999987532 2478899999999999999999999876
Q ss_pred CC-CCC-eeccccCCCe-EEEEEcC---CCcEEEcc----EEEeCCCccccCCEEEEEeCccccCCC
Q 040959 117 NN-NSS-RLPTLLPSRD-LHVTRGD---SGALLVGG----VQVVMPGLYYSSYVAVHGLAGILTFRS 173 (391)
Q Consensus 117 ~p-nGT-tLpTLL~G~~-LtVT~~s---gg~V~VNg----VkVV~PDI~~ssNGVVHGIDgVLlP~S 173 (391)
. +|. .++|+. |.. +.+.... +..+++|| ++|+.+|+.. +|||||+||+||.|..
T Consensus 95 -~~~~~~~~~Tl~-g~~~l~~~v~~~~~~~~v~v~~g~~~a~v~~~di~~-~NGvIhvID~VL~pp~ 158 (324)
T 1o70_A 95 -NANLIAQVPTVN-NNTFLYFNVRGEGSDTVITVEGGGVNATVIQADVAQ-TNGYVHIIDHVLGVPY 158 (324)
T ss_dssp -TSSSCCCEEBSS-TTCEEEEEEESCGGGCEEEEEETTEEEEEEEEEEEC-SSEEEEEESSCTTSCC
T ss_pred -cCCCceEEEcCC-CCceEEEEEeecCCceEEEEcCCceeEEEEeccccc-cCcEEEEEchhhhhch
Confidence 2 122 678864 554 5554321 24588985 9999999986 5899999999999954
No 5
>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1
Probab=99.78 E-value=6.9e-20 Score=172.53 Aligned_cols=133 Identities=18% Similarity=0.140 Sum_probs=103.3
Q ss_pred HHHHHHh-CChHHHHHHHHhcCchhhcc-CCCCeEEEccCChhhccCC----------CCCCh-hHHHhcccccccCC--
Q 040959 36 VLLLLHA-GGHTLFANAIATSDLLFDLL-SLPSLTLFAPTDPSLFAVD----------MTQTP-PFYLSILRLHVLPL-- 100 (391)
Q Consensus 36 IietLrs-~GytsfA~AL~aAgLl~~Ll-~~gpfTIFAPTDeAF~ald----------L~~n~-~~L~sVLrYHVVPG-- 100 (391)
+.+.|++ ..|+.|..+++.+|+.+.|. ..+++|||||+|+||.++. +..+. +.|+++|+|||+|+
T Consensus 161 i~~~l~~~~~fs~~~~~l~~~gl~~~L~~~~~~~TvFAPtd~Af~~l~~~~~~~~~~~l~~~~~~~l~~iL~yHvv~~~~ 240 (324)
T 1o70_A 161 VLGKLESDPMMSDTYKMGKFSHFNDQLNNTQRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILERHLAISDK 240 (324)
T ss_dssp HHHHHHHCGGGHHHHHHTTTTTTTGGGGCSSSEEEEEEECHHHHHHHHHHCHHHHHHHTSGGGHHHHHHHHHTTEEEESS
T ss_pred HHHHhhcCchHHHHHHHHHhhCHHHHhCCCCCCeEEEEeChHHHHhhhhhchhHHHHHhccCcHHHHHHHHHhcEeCCcc
Confidence 5666765 46999999999999988887 4789999999999998741 12222 48999999999999
Q ss_pred ccCHHHHHhhcCCCCCCCCCC-eeccccCCCeEEEEEc-CCCcEEEc----cEEEeCCCccccCCEEEEEeCccccCCCC
Q 040959 101 RLSWTELLQLISPSNNNNNSS-RLPTLLPSRDLHVTRG-DSGALLVG----GVQVVMPGLYYSSYVAVHGLAGILTFRSP 174 (391)
Q Consensus 101 rLs~sDL~~Li~~~~~~pnGT-tLpTLL~G~~LtVT~~-sgg~V~VN----gVkVV~PDI~~ssNGVVHGIDgVLlP~SP 174 (391)
.++.++|.+.-. +.+. .++|+. +.|.|+.. .++.++|| +++|+.+|+.+ .|||||+||+||+|.+-
T Consensus 241 ~~~~~~l~~~~~-----~~~~~~~~Tl~--~~l~v~~~~~~~~v~v~~~~~~a~v~~~di~~-~NGvIHvID~VL~P~~~ 312 (324)
T 1o70_A 241 EYTMKDLVKFSQ-----ESGSVILPTFR--DSLSIRVEEEAGRYVIIWNYKKINVYRPDVEC-TNGIIHVIDYPLLEEKD 312 (324)
T ss_dssp CCCHHHHHHHHH-----HSSSEEEECSS--SEEEEEEEEETTEEEEEETTEEEEEEEEEEEE-TTEEEEEESSCSCCTTT
T ss_pred eEcHHHHhhhcc-----CCCeeeeeccC--CcEEEEEEecCCEEEEEecCceeEEEEccccc-CCCeEEEeceeecCCcc
Confidence 888899986500 1112 378864 57888652 36789998 89999999986 58999999999999875
Q ss_pred CC
Q 040959 175 IH 176 (391)
Q Consensus 175 ~~ 176 (391)
.+
T Consensus 313 ~~ 314 (324)
T 1o70_A 313 VV 314 (324)
T ss_dssp TC
T ss_pred cc
Confidence 54
No 6
>3mkv_A Putative amidohydrolase; sargasso SEA, structural genomics, protein structure initiat NEW YORK structural genomix research consortium, nysgxrc; HET: KCX; 2.40A {Undefined}
Probab=17.59 E-value=91 Score=26.38 Aligned_cols=35 Identities=26% Similarity=0.502 Sum_probs=24.8
Q ss_pred CcCCCCceeeccCCCCCCcchhh----hhhhhceeeeecceee
Q 040959 350 EPAENQDVLTLDSPSPAPMTNDL----KRSRKIREVFVGGEIC 388 (391)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 388 (391)
||-..-|++.+|.- |.. |+ .+.++|+.|+++|+|.
T Consensus 373 ~~G~~ADlvvlD~d---Pl~-di~~~~~~~~~v~~Vi~~G~vv 411 (426)
T 3mkv_A 373 VPGAHADVLVVDGN---PLK-SVDCLLGQGEHIPLVMKDGRLF 411 (426)
T ss_dssp CTTSBCCEEEESSC---TTT-CSTTTCSSSTTCCEEEETTEEE
T ss_pred CCCCcceEEEECCC---hHH-hHHHHhCCCCCccEEEECCEEE
Confidence 56667799999842 221 22 3567899999999985
No 7
>3mtw_A L-arginine carboxypeptidase CC2672; hydrolase; HET: KCX M3R; 1.70A {Caulobacter vibrioides}
Probab=13.91 E-value=1.5e+02 Score=25.03 Aligned_cols=35 Identities=20% Similarity=0.351 Sum_probs=27.0
Q ss_pred CcCCCCceeeccCCCCCCcchhhhhhhhceeeeecceee
Q 040959 350 EPAENQDVLTLDSPSPAPMTNDLKRSRKIREVFVGGEIC 388 (391)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (391)
||-..-|++-+|.- |. .|++..++++.|+++|+|.
T Consensus 366 ~~G~~ADlvvld~d---Pl-~di~~~~~v~~Vi~~G~vv 400 (403)
T 3mtw_A 366 AVGRYGDMIAVAGD---PL-ADVTTLEKPVFVMKGGAVV 400 (403)
T ss_dssp CTTSBCCEEEESSC---TT-TCGGGGGSCSEEEETTEEE
T ss_pred CCCCcceEEEECCC---hh-HhHhhhcCcCEEEECCEEE
Confidence 55667799999852 33 4777778899999999985
No 8
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=13.75 E-value=1.4e+02 Score=27.39 Aligned_cols=49 Identities=16% Similarity=0.368 Sum_probs=32.2
Q ss_pred CCCccchhhhh-hc--CcCCCCceeeccCCCCCCcchhhhhhhhceeeeecceeee
Q 040959 337 SRGSASLFGYF-LA--EPAENQDVLTLDSPSPAPMTNDLKRSRKIREVFVGGEICA 389 (391)
Q Consensus 337 ~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (391)
+.+.|.+||.- ++ ||-..-|++.+|.. |.. |+...++++.|+++|+++.
T Consensus 348 T~n~A~~lgl~~~G~i~~G~~ADlvvld~~---p~~-~~~~~~~v~~v~~~G~~v~ 399 (408)
T 3be7_A 348 TIKTATLFGIENIGQIKEGFDADIVGVIEN---PLA-NIRTLEEVAFVMKEGKVYK 399 (408)
T ss_dssp THHHHHHHTCSSCSSCCTTSBCCEEEESSC---TTT-CGGGTTSCCEEEETTEEEE
T ss_pred HHHHHHHhCCCcccccCCCCccCEEEECCC---chh-hHHHhhceeEEEECCEEEe
Confidence 34445555542 22 55567789989853 343 5655578999999999864
No 9
>2jy5_A Ubiquilin-1; UBA, alternative splicing, cytoplasm, nucleus, phosphoprotein, proteasome, signaling protein; NMR {Homo sapiens} PDB: 2jy6_B
Probab=13.04 E-value=2e+02 Score=20.58 Aligned_cols=31 Identities=19% Similarity=0.118 Sum_probs=22.6
Q ss_pred CCCCCchhHHHHHHHHHhCCh-HH--HHHHHHhc
Q 040959 25 PAGIPTSDLDAVLLLLHAGGH-TL--FANAIATS 55 (391)
Q Consensus 25 sas~p~~ele~IietLrs~Gy-ts--fA~AL~aA 55 (391)
....|++.+++.++.|.+.|| .. ...||.++
T Consensus 4 ~~~~p~~~~~~~l~~L~~MGF~~~~~~~~AL~~t 37 (52)
T 2jy5_A 4 EFQNPEVRFQQQLEQLSAMGFLNREANLQALIAT 37 (52)
T ss_dssp CTTSTTTTTHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHcCCCCHHHHHHHHHHh
Confidence 455678899999999999999 32 23555443
No 10
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=11.41 E-value=1.8e+02 Score=26.39 Aligned_cols=36 Identities=19% Similarity=0.346 Sum_probs=27.3
Q ss_pred CcCCCCceeeccCCCCCCcchhhhhhhhceeeeecceeee
Q 040959 350 EPAENQDVLTLDSPSPAPMTNDLKRSRKIREVFVGGEICA 389 (391)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (391)
||-..-|++-+|.- |.. |+...++++.|+++|++..
T Consensus 366 ~~G~~ADlvv~d~~---p~~-~~~~~~~v~~v~~~G~~v~ 401 (403)
T 3gnh_A 366 AVGRYGDMIAVAGD---PLA-DVTTLEKPVFVMKGGAVVK 401 (403)
T ss_dssp CTTSBCCEEEESSC---TTT-CGGGGGSCSEEEETTEEEE
T ss_pred CCCCcCCEEEECCC---hhh-CHHHhcCcCEEEECCEEEe
Confidence 55566799999864 443 6777789999999999853
Done!