Query 040960
Match_columns 117
No_of_seqs 126 out of 1053
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 03:18:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040960.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040960hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hdl_A Royal PALM TREE peroxid 100.0 5.9E-48 2E-52 312.3 7.5 99 19-117 2-101 (304)
2 1gwu_A Peroxidase C1A; oxidore 100.0 7.3E-46 2.5E-50 300.5 8.2 100 18-117 2-102 (309)
3 1sch_A PNP, peanut peroxidase, 100.0 1E-45 3.4E-50 298.0 7.5 100 18-117 1-101 (294)
4 1pa2_A Peroxidase, ATP A2; oxi 100.0 1.4E-45 4.9E-50 298.3 7.9 100 18-117 2-102 (306)
5 1fhf_A SEED coat peroxidase; o 100.0 1.3E-45 4.5E-50 298.3 6.6 100 18-117 1-101 (304)
6 1qgj_A Peroxidase N; oxidoredu 100.0 1.7E-44 5.9E-49 291.3 7.8 97 18-117 1-98 (300)
7 1bgp_A Barley grain peroxidase 100.0 9.6E-45 3.3E-49 293.9 5.8 103 15-117 5-110 (309)
8 3rrw_A Thylakoid lumenal 29 kD 100.0 2E-29 7E-34 201.2 3.8 86 26-117 8-102 (268)
9 2cca_A Peroxidase/catalase T; 99.9 5.4E-25 1.9E-29 194.4 1.0 91 17-117 56-165 (740)
10 1iyn_A Chloroplastic ascorbate 99.9 1.2E-24 4E-29 175.2 2.5 77 29-117 5-93 (295)
11 1ub2_A Catalase-peroxidase; KA 99.9 4E-25 1.4E-29 194.8 -0.8 91 17-117 43-151 (720)
12 1llp_A LIP4.15, lignin peroxid 99.9 2.6E-25 9E-30 182.3 -2.8 75 16-117 21-109 (343)
13 2e39_A Peroxidase; heme protei 99.9 5.2E-25 1.8E-29 180.6 -1.3 76 15-117 29-118 (344)
14 2vcn_A Ascorbate peroxidase; I 99.9 5.7E-24 1.9E-28 168.9 1.2 77 33-117 28-108 (261)
15 1itk_A Catalase-peroxidase; he 99.9 1.7E-23 5.8E-28 184.7 1.2 92 16-117 43-153 (731)
16 3m5q_A Manganese peroxidase 1; 99.8 1.3E-21 4.5E-26 161.2 2.3 84 25-117 11-106 (357)
17 2cca_A Peroxidase/catalase T; 99.8 2.9E-21 1E-25 170.7 4.5 75 37-117 456-544 (740)
18 3riv_A Ascorbate peroxidase; a 99.8 1.2E-20 4.2E-25 149.8 5.1 79 32-117 9-92 (271)
19 3fmu_A VersatIle peroxidase VP 99.8 2E-20 6.8E-25 152.8 1.6 82 26-117 12-103 (331)
20 1u2k_A Peroxidase/catalase HPI 99.8 8.4E-20 2.9E-24 147.7 3.4 72 35-117 32-112 (309)
21 3q3u_A Lignin peroxidase; oxid 99.8 1.2E-19 4E-24 148.7 1.6 83 25-117 12-110 (338)
22 1itk_A Catalase-peroxidase; he 99.7 4.1E-19 1.4E-23 156.9 3.7 78 35-117 445-534 (731)
23 1ub2_A Catalase-peroxidase; KA 99.7 1.7E-18 5.8E-23 152.8 2.7 69 37-117 446-525 (720)
24 3e2o_A CCP, cytochrome C perox 99.7 2E-17 6.7E-22 133.2 3.7 80 26-117 14-108 (294)
25 3ut2_A Catalase-peroxidase 2; 99.6 2.8E-17 9.5E-22 145.7 1.9 91 17-117 67-176 (764)
26 3vli_A Catalase-peroxidase 2; 99.6 7.4E-17 2.5E-21 142.6 1.4 91 17-117 44-153 (737)
27 3n3r_A Catalase-peroxidase; E1 99.6 2.2E-16 7.6E-21 139.7 1.4 91 17-117 60-169 (748)
28 3vli_A Catalase-peroxidase 2; 99.5 1.3E-14 4.4E-19 128.4 3.7 74 38-117 448-534 (737)
29 3n3r_A Catalase-peroxidase; E1 99.4 2.1E-13 7.1E-18 120.9 3.8 74 38-117 465-551 (748)
30 3ut2_A Catalase-peroxidase 2; 99.3 3.6E-13 1.2E-17 119.6 4.1 72 39-117 479-564 (764)
31 2k5e_A Uncharacterized protein 56.2 6.5 0.00022 24.7 2.1 28 39-69 11-38 (73)
32 1mr1_C SKI oncogene, SKI, C-SK 46.5 4.7 0.00016 27.5 0.3 19 57-76 6-24 (99)
33 2k53_A A3DK08 protein; NESG, C 31.1 43 0.0015 21.0 3.0 27 39-68 9-35 (76)
34 3b4s_A Protein LUXT; APC91483. 28.2 14 0.00048 24.8 0.3 14 49-62 36-50 (94)
35 1nho_A Probable thioredoxin; b 20.4 79 0.0027 17.9 2.6 9 22-30 7-15 (85)
No 1
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0
Probab=100.00 E-value=5.9e-48 Score=312.25 Aligned_cols=99 Identities=39% Similarity=0.734 Sum_probs=96.6
Q ss_pred CCcCcccCCCccHHHHHHHHHHHHHHhCcCchhhhhhhhhccccccCCCCcccccCCCCCCcccccccCC-CCcchHHHH
Q 040960 19 LVLHFYKKSCPSAEMLVKEEMKRKMLSDISSAATILRLAFHDCQVDGCDGSILLGNSNGITTETLSDKNF-GIRKVDIIN 97 (117)
Q Consensus 19 L~~~fY~~sCP~aE~IV~~~v~~~~~~d~~~aa~lLRL~FHDCfV~GCDaSiLL~~~~~~~~E~~a~~n~-~l~gfd~Id 97 (117)
|+++||++|||++|+|||++|++++.+||+++|++||||||||||+||||||||++++++.+||++++|. +|||||+||
T Consensus 2 L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSiLld~t~~~~~Ek~~~~N~~~lrgf~vid 81 (304)
T 3hdl_A 2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANNTAEKDAIPNNPSLRGFEVIT 81 (304)
T ss_dssp CEETTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTSSSSGGGCCCBTTBCCGGGSTTTTTTCCCHHHHH
T ss_pred CccChhhCcCcCHHHHHHHHHHHHHHhCCcchHHHHHHheecccCCCCCeeeeecCCCCCcccccCCCcccchHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999988888999999998 899999999
Q ss_pred HHHHHhhhhCCCcccccccC
Q 040960 98 EIKGSLEKICPETVSCADII 117 (117)
Q Consensus 98 ~iK~~lE~~CPgvVSCADIl 117 (117)
.||++||++|||+|||||||
T Consensus 82 ~iK~~le~~Cp~~VScADil 101 (304)
T 3hdl_A 82 AAKSAVEAACPQTVSCADIL 101 (304)
T ss_dssp HHHHHHHHHSTTTSCHHHHH
T ss_pred HHHHHHHhhCCCCccHHHHH
Confidence 99999999999999999995
No 2
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ...
Probab=100.00 E-value=7.3e-46 Score=300.45 Aligned_cols=100 Identities=43% Similarity=0.768 Sum_probs=97.0
Q ss_pred CCCcCcccCCCccHHHHHHHHHHHHHHhCcCchhhhhhhhhccccccCCCCcccccCCCCCCcccccccCC-CCcchHHH
Q 040960 18 ELVLHFYKKSCPSAEMLVKEEMKRKMLSDISSAATILRLAFHDCQVDGCDGSILLGNSNGITTETLSDKNF-GIRKVDII 96 (117)
Q Consensus 18 ~L~~~fY~~sCP~aE~IV~~~v~~~~~~d~~~aa~lLRL~FHDCfV~GCDaSiLL~~~~~~~~E~~a~~n~-~l~gfd~I 96 (117)
||+++||++|||++|+|||+.|++++.+||+++|++||||||||||+||||||||+++++..+|+++++|. ++|||++|
T Consensus 2 ~L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDcfv~GCDgSilld~t~~~~~E~~~~~N~~~~rgf~vi 81 (309)
T 1gwu_A 2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVI 81 (309)
T ss_dssp CCBTTTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTSSSSGGGCCCCSSSCCGGGSTTTTTTCCCHHHH
T ss_pred CCccchhhCcCcCHHHHHHHHHHHHHHhCCccccchhheehhhhccCCCCceEEecCCCCccccccCccccccchhHHHH
Confidence 69999999999999999999999999999999999999999999999999999999987777999999997 89999999
Q ss_pred HHHHHHhhhhCCCcccccccC
Q 040960 97 NEIKGSLEKICPETVSCADII 117 (117)
Q Consensus 97 d~iK~~lE~~CPgvVSCADIl 117 (117)
|.||++||+.||++|||||||
T Consensus 82 d~iK~~le~~cp~~VScADil 102 (309)
T 1gwu_A 82 DRMKAAVESACPRTVSCADLL 102 (309)
T ss_dssp HHHHHHHHHHSTTTSCHHHHH
T ss_pred HHHHHHHHhhCCCcccHHHHH
Confidence 999999999999999999995
No 3
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1
Probab=100.00 E-value=1e-45 Score=297.97 Aligned_cols=100 Identities=40% Similarity=0.768 Sum_probs=97.1
Q ss_pred CCCcCcccCCCccHHHHHHHHHHHHHHhCcCchhhhhhhhhccccccCCCCcccccCCCCCCcccccccCC-CCcchHHH
Q 040960 18 ELVLHFYKKSCPSAEMLVKEEMKRKMLSDISSAATILRLAFHDCQVDGCDGSILLGNSNGITTETLSDKNF-GIRKVDII 96 (117)
Q Consensus 18 ~L~~~fY~~sCP~aE~IV~~~v~~~~~~d~~~aa~lLRL~FHDCfV~GCDaSiLL~~~~~~~~E~~a~~n~-~l~gfd~I 96 (117)
||+++||++|||++|+|||++|++++.+||+++|++||||||||||+||||||||+++++..+|+++++|. +||||++|
T Consensus 1 ~L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDcfv~GcDgSill~~t~~~~~E~~~~~N~~~lrgf~vi 80 (294)
T 1sch_A 1 ELSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNFTGEKTAGPNANSIRGFEVI 80 (294)
T ss_dssp CCBTTTTTTTCTTHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHTTTSSSSGGGCCCBTTBCCSTTSTTTTTTCCCHHHH
T ss_pred CCCCccccCcCcCHHHHHHHHHHHHHHhCCCCCccccceeheecCCCCCCceeeccCCCCCcccccCcccccccchHHHH
Confidence 69999999999999999999999999999999999999999999999999999999987777999999998 99999999
Q ss_pred HHHHHHhhhhCCCcccccccC
Q 040960 97 NEIKGSLEKICPETVSCADII 117 (117)
Q Consensus 97 d~iK~~lE~~CPgvVSCADIl 117 (117)
|.||+++|+.||++|||||||
T Consensus 81 d~iK~~le~~cp~~VScADil 101 (294)
T 1sch_A 81 DTIKSQVESLCPGVVSCADIL 101 (294)
T ss_dssp HHHHHHHHHHSTTTSCHHHHH
T ss_pred HHHHHHHHhhCCCcccHHHHH
Confidence 999999999999999999995
No 4
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A*
Probab=100.00 E-value=1.4e-45 Score=298.28 Aligned_cols=100 Identities=38% Similarity=0.795 Sum_probs=96.8
Q ss_pred CCCcCcccCCCccHHHHHHHHHHHHHHhCcCchhhhhhhhhccccccCCCCcccccCCCCCCcccccccCC-CCcchHHH
Q 040960 18 ELVLHFYKKSCPSAEMLVKEEMKRKMLSDISSAATILRLAFHDCQVDGCDGSILLGNSNGITTETLSDKNF-GIRKVDII 96 (117)
Q Consensus 18 ~L~~~fY~~sCP~aE~IV~~~v~~~~~~d~~~aa~lLRL~FHDCfV~GCDaSiLL~~~~~~~~E~~a~~n~-~l~gfd~I 96 (117)
||+++||++|||++|+|||++|++++.+||+++|++||||||||||+||||||||+++++..+|+++++|. ++|||++|
T Consensus 2 ~L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDcfv~GcDgSilld~t~~~~~E~~~~~N~~~lrgf~vi 81 (306)
T 1pa2_A 2 QLNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSIQSEKNAGPNVNSARGFNVV 81 (306)
T ss_dssp CCBTTTTTTTCTTHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHTTTSSSSGGGCCCCSSCCCGGGSTTTTTTCCCHHHH
T ss_pred CCCCccccCcCcCHHHHHHHHHHHHHHhCCccchhhhhhhhhhccccCCCcceeecCCCCccccccCccccccchhHHHH
Confidence 69999999999999999999999999999999999999999999999999999999987777899999996 89999999
Q ss_pred HHHHHHhhhhCCCcccccccC
Q 040960 97 NEIKGSLEKICPETVSCADII 117 (117)
Q Consensus 97 d~iK~~lE~~CPgvVSCADIl 117 (117)
|.||++||+.||++|||||||
T Consensus 82 d~iK~~le~~cp~~VScADil 102 (306)
T 1pa2_A 82 DNIKTALENACPGVVSCSDVL 102 (306)
T ss_dssp HHHHHHHHHHSTTTCCHHHHH
T ss_pred HHHHHHHHhhCCCCcCHHHHH
Confidence 999999999999999999995
No 5
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1
Probab=100.00 E-value=1.3e-45 Score=298.28 Aligned_cols=100 Identities=42% Similarity=0.785 Sum_probs=96.8
Q ss_pred CCCcCcccCCCccHHHHHHHHHHHHHHhCcCchhhhhhhhhccccccCCCCcccccCCCCCCcccccccCC-CCcchHHH
Q 040960 18 ELVLHFYKKSCPSAEMLVKEEMKRKMLSDISSAATILRLAFHDCQVDGCDGSILLGNSNGITTETLSDKNF-GIRKVDII 96 (117)
Q Consensus 18 ~L~~~fY~~sCP~aE~IV~~~v~~~~~~d~~~aa~lLRL~FHDCfV~GCDaSiLL~~~~~~~~E~~a~~n~-~l~gfd~I 96 (117)
||+++||++|||++|+|||++|++++.+||+++|++||||||||||+||||||||+++++..+|+++++|. ++|||++|
T Consensus 1 ~L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDcfv~GcDgSilld~t~~~~~E~~~~~N~~~~rgf~vi 80 (304)
T 1fhf_A 1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIESEQDALPNINSIRGLDVV 80 (304)
T ss_dssp CCBTTTTTTTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTTCSSSGGGCCCCSSCCCGGGSTTTTTTCCCHHHH
T ss_pred CCCCccccCcCcCHHHHHHHHHHHHHHhCCcchhhhhhheeeecccCCCCceEEecCCCCCcccccCccccccchhHHHH
Confidence 69999999999999999999999999999999999999999999999999999999987777999999997 88999999
Q ss_pred HHHHHHhhhhCCCcccccccC
Q 040960 97 NEIKGSLEKICPETVSCADII 117 (117)
Q Consensus 97 d~iK~~lE~~CPgvVSCADIl 117 (117)
|.||++||+.|||+|||||||
T Consensus 81 d~iK~~le~~cp~~VScADil 101 (304)
T 1fhf_A 81 NDIKTAVENSCPDTVSCADIL 101 (304)
T ss_dssp HHHHHHHHTTSTTTSCHHHHH
T ss_pred HHHHHHHHHhCCCcccHHHHH
Confidence 999999999999999999995
No 6
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1
Probab=100.00 E-value=1.7e-44 Score=291.30 Aligned_cols=97 Identities=40% Similarity=0.786 Sum_probs=94.0
Q ss_pred CCCcCcccCCCccHHHHHHHHHHHHHHhCcCchhhhhhhhhccccccCCCCcccccCCCCCCcccccccCC-CCcchHHH
Q 040960 18 ELVLHFYKKSCPSAEMLVKEEMKRKMLSDISSAATILRLAFHDCQVDGCDGSILLGNSNGITTETLSDKNF-GIRKVDII 96 (117)
Q Consensus 18 ~L~~~fY~~sCP~aE~IV~~~v~~~~~~d~~~aa~lLRL~FHDCfV~GCDaSiLL~~~~~~~~E~~a~~n~-~l~gfd~I 96 (117)
||+++||++|||++|+|||+.|++++.+|++++|++||||||||||+||||||||+++ .+|+++++|. ++|||++|
T Consensus 1 ~L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDcfv~GcDgSill~~~---~~E~~~~~N~~~lrgf~vi 77 (300)
T 1qgj_A 1 QLSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGA---DSEKLAIPNINSARGFEVI 77 (300)
T ss_dssp CCBTTTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTBSSSGGGCCST---TCGGGSTTTTTTCCCHHHH
T ss_pred CCccchhcCcCcCHHHHHHHHHHHHHHhCCCCCccchheeeeecccCCCCceEeecCC---chhhcCcccccccchHHHH
Confidence 6999999999999999999999999999999999999999999999999999999986 4899999998 89999999
Q ss_pred HHHHHHhhhhCCCcccccccC
Q 040960 97 NEIKGSLEKICPETVSCADII 117 (117)
Q Consensus 97 d~iK~~lE~~CPgvVSCADIl 117 (117)
|.||++||+.||++|||||||
T Consensus 78 d~iK~~le~~cp~~VScADil 98 (300)
T 1qgj_A 78 DTIKAAVENACPGVVSCADIL 98 (300)
T ss_dssp HHHHHHHHHHSTTTSCHHHHH
T ss_pred HHHHHHHHhhCCCcccHHHHH
Confidence 999999999999999999995
No 7
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1
Probab=100.00 E-value=9.6e-45 Score=293.90 Aligned_cols=103 Identities=39% Similarity=0.660 Sum_probs=98.4
Q ss_pred cCCCCCcCcccCCCccHHHHHHHHHHHHHHhCcCchhhhhhhhhccccccCCCCcccccCCCCCCcccccccCC--CCcc
Q 040960 15 GNGELVLHFYKKSCPSAEMLVKEEMKRKMLSDISSAATILRLAFHDCQVDGCDGSILLGNSNGITTETLSDKNF--GIRK 92 (117)
Q Consensus 15 ~~~~L~~~fY~~sCP~aE~IV~~~v~~~~~~d~~~aa~lLRL~FHDCfV~GCDaSiLL~~~~~~~~E~~a~~n~--~l~g 92 (117)
..+||+++||++|||++|+||++.|++++.+|++++|++||||||||||+||||||||++++++.+|+++++|. ++||
T Consensus 5 ~~~~L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDcfv~GcDgSilld~t~~~~~E~~~~~N~~ls~rg 84 (309)
T 1bgp_A 5 VAPGLSFDFYWQTCPRAESIVREFVQEAVRKDIGLAAGLLRLHFHDCFVQGCDASVLLDGSATGPGEQQAPPNLTLRPSA 84 (309)
T ss_dssp CCTTCBTTTTTTTCTTHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHTTSSSSGGGSTTSTTSTTCCSSCGGGCCCHHH
T ss_pred cccCccCChhhCcCcCHHHHHHHHHHHHHHhCCCccccccceEeeecccCCCCeeEEecCCCCCcccccCcccccccchh
Confidence 45789999999999999999999999999999999999999999999999999999999988777899999997 5799
Q ss_pred hHHHHHHHHHhhhhC-CCcccccccC
Q 040960 93 VDIINEIKGSLEKIC-PETVSCADII 117 (117)
Q Consensus 93 fd~Id~iK~~lE~~C-PgvVSCADIl 117 (117)
|++|+.||++||+.| |++|||||||
T Consensus 85 ~~vi~~iK~~le~~c~p~~VScADil 110 (309)
T 1bgp_A 85 FKAVNDIRDRLERECRGAVVSCSDIL 110 (309)
T ss_dssp HHHHHHHHHHHHHHHTSSCSCHHHHH
T ss_pred HHHHHHHHHHHHhccCCCcccHHHHH
Confidence 999999999999999 9999999995
No 8
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana}
Probab=99.95 E-value=2e-29 Score=201.23 Aligned_cols=86 Identities=24% Similarity=0.398 Sum_probs=82.1
Q ss_pred CCCccHHHHHHHHHHHHHHhCcCchhhhhhhhhcccc-------ccCCCCcccccCCCCCCcccccccCCCC-cchHHHH
Q 040960 26 KSCPSAEMLVKEEMKRKMLSDISSAATILRLAFHDCQ-------VDGCDGSILLGNSNGITTETLSDKNFGI-RKVDIIN 97 (117)
Q Consensus 26 ~sCP~aE~IV~~~v~~~~~~d~~~aa~lLRL~FHDCf-------V~GCDaSiLL~~~~~~~~E~~a~~n~~l-~gfd~Id 97 (117)
..+|++|+||++.|++++.+||+.+|.+|||+||||| ++||||||+|+ .|++.++|.+| +||++|+
T Consensus 8 ~~~~~~~~iV~~~v~~~~~~~~~~a~~llRLafHDc~Ty~~~~~~gGcDGSIll~------~E~~~~~N~gL~~~~~~l~ 81 (268)
T 3rrw_A 8 RQRSEFQSKIKILLSTTIKAKPELVPSLLKLALNDAMTYDKATKSGGANGSIRFS------SELSRAENEGLSDGLSLIE 81 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHTTCBTTTTBCSSSSGGGSH------HHHTSGGGTTCHHHHHHHH
T ss_pred hccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHhhcCcCCCCCCCCCCeeeeeh------hhccCcccccHHHHHHHHH
Confidence 3479999999999999999999999999999999999 99999999996 59999999999 8999999
Q ss_pred HHHHHhhhhCCC-cccccccC
Q 040960 98 EIKGSLEKICPE-TVSCADII 117 (117)
Q Consensus 98 ~iK~~lE~~CPg-vVSCADIl 117 (117)
.||+++|+.||| +||||||+
T Consensus 82 ~iK~~~e~~cpg~~VS~ADli 102 (268)
T 3rrw_A 82 EVKKEIDSISKGGPISYADII 102 (268)
T ss_dssp HHHHHHHTTCSSCCCCHHHHH
T ss_pred HHHHHHHhhCCCCCCCHHHHH
Confidence 999999999999 99999985
No 9
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A*
Probab=99.89 E-value=5.4e-25 Score=194.37 Aligned_cols=91 Identities=15% Similarity=0.257 Sum_probs=84.9
Q ss_pred CCCCcCc-ccCCCccHH-HHHHHHHHHHHHhC--------cCchhhhhhhhhccccc-------cCCC-CcccccCCCCC
Q 040960 17 GELVLHF-YKKSCPSAE-MLVKEEMKRKMLSD--------ISSAATILRLAFHDCQV-------DGCD-GSILLGNSNGI 78 (117)
Q Consensus 17 ~~L~~~f-Y~~sCP~aE-~IV~~~v~~~~~~d--------~~~aa~lLRL~FHDCfV-------~GCD-aSiLL~~~~~~ 78 (117)
..|..+| |+++||++| ++|++.|++.+.++ +..+|.+|||+|||||| +||| |||+++
T Consensus 56 ~pl~~~f~Y~~~~~~~d~~~Vk~~v~~~~~~~~~~wpad~~~~~~~liRL~fHDc~t~~~sd~~gG~dggsi~~~----- 130 (740)
T 2cca_A 56 DPMGAAFDYAAEVATIDVDALTRDIEEVMTTSQPWWPADYGHYGPLFIRMAWHAAGTYRIHDGRGGAGGGMQRFA----- 130 (740)
T ss_dssp CTTCTTCCHHHHHTTCCHHHHHHHHHHHHTSCCTTSCCGGGCCHHHHHHHHHHHHTTCCTTTCCCSSTTCGGGST-----
T ss_pred CCCCcccchhhccCchHHHHHHHHHHHHHhcccccccccCCccHHHHHHHHHhhcccccccCCCCCCCCcccccc-----
Confidence 4588999 999999999 99999999999998 89999999999999999 7999 899974
Q ss_pred CcccccccCCCC-cchHHHHHHHHHhhhhCCCcccccccC
Q 040960 79 TTETLSDKNFGI-RKVDIINEIKGSLEKICPETVSCADII 117 (117)
Q Consensus 79 ~~E~~a~~n~~l-~gfd~Id~iK~~lE~~CPgvVSCADIl 117 (117)
.|++.++|.++ |||++|+.||+++ |++||||||+
T Consensus 131 -~E~~~~~N~~l~~~~~~i~~iK~k~----p~~VScADil 165 (740)
T 2cca_A 131 -PLNSWPDNASLDKARRLLWPVKKKY----GKKLSWADLI 165 (740)
T ss_dssp -TGGGCGGGTTHHHHHHTTHHHHHHH----GGGSCHHHHH
T ss_pred -hhccCccccchHHHHHHHHHHHHhc----cCCccHHHHH
Confidence 59999999987 8999999999999 8999999985
No 10
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1
Probab=99.89 E-value=1.2e-24 Score=175.16 Aligned_cols=77 Identities=22% Similarity=0.396 Sum_probs=69.0
Q ss_pred ccHHHHHHHHHHHHHHhCcCchhhhhhhhhcccc-----------ccCCCCcccccCCCCCCcccccccCCCC-cchHHH
Q 040960 29 PSAEMLVKEEMKRKMLSDISSAATILRLAFHDCQ-----------VDGCDGSILLGNSNGITTETLSDKNFGI-RKVDII 96 (117)
Q Consensus 29 P~aE~IV~~~v~~~~~~d~~~aa~lLRL~FHDCf-----------V~GCDaSiLL~~~~~~~~E~~a~~n~~l-~gfd~I 96 (117)
|+..+.||+.|++.+. +++.+|++|||+||||| ++||||||||+ .|+++++|.++ |||++|
T Consensus 5 ~~d~~~vr~~i~~~~~-~~~~~a~llRL~FHDc~ty~~~~~~~~~~gGcDgSill~------~E~~~~~N~~l~rg~~~i 77 (295)
T 1iyn_A 5 SAQLKSAREDIKELLK-TKFCHPIMVRLGWHDAGTYNKNIEEWPQRGGANGSLRFD------VELKHGANAGLVNALNLL 77 (295)
T ss_dssp HHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHTTCCTTCCSTTTTCSSSSGGGSH------HHHTSGGGTTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-CCCchHHHHHHHHHHHhccccccccccCCCCCCeeEEeh------hhccCccccCHHHHHHHH
Confidence 4566789999998764 68999999999999999 59999999997 59999999877 999999
Q ss_pred HHHHHHhhhhCCCcccccccC
Q 040960 97 NEIKGSLEKICPETVSCADII 117 (117)
Q Consensus 97 d~iK~~lE~~CPgvVSCADIl 117 (117)
+.||+++| .|||||||
T Consensus 78 ~~iK~~~e-----~VScADil 93 (295)
T 1iyn_A 78 KPIKDKYS-----GVTYADLF 93 (295)
T ss_dssp HHHHHHCT-----TSCHHHHH
T ss_pred HHHHHHcC-----CCCHHHHH
Confidence 99999998 49999985
No 11
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3
Probab=99.89 E-value=4e-25 Score=194.75 Aligned_cols=91 Identities=18% Similarity=0.296 Sum_probs=84.3
Q ss_pred CCCCcCc-ccCCCccHHHHHHHHHHHHHHhC--------cCchhhhhhhhhccccc-------cCCC-CcccccCCCCCC
Q 040960 17 GELVLHF-YKKSCPSAEMLVKEEMKRKMLSD--------ISSAATILRLAFHDCQV-------DGCD-GSILLGNSNGIT 79 (117)
Q Consensus 17 ~~L~~~f-Y~~sCP~aE~IV~~~v~~~~~~d--------~~~aa~lLRL~FHDCfV-------~GCD-aSiLL~~~~~~~ 79 (117)
..|..+| |+++||++|+||++.|++.+.++ +..+|.+|||+|||||| +||| |||++.
T Consensus 43 ~pl~~~f~Y~~~c~~~d~~Vr~~v~~~~~~~~~~wp~d~~~~g~~liRLafHd~~t~~~~dg~gG~dggsirf~------ 116 (720)
T 1ub2_A 43 NPMGPDFNYQEEVQKLDAALKQDLQALMTDSQDWWPADWGHYGGLMIRLTWHAAGTYRIADGRGGAGTGNQRFA------ 116 (720)
T ss_dssp CCSCTTCCHHHHHTTSCSTTHHHHHHHTTCCCTTSCCGGGCCHHHHHHHHHHHHTTCCTTTCCCSSTTCGGGST------
T ss_pred CCCCCCcChhhhcCCHHHHHHHHHHHHHhcccccccccCCccHHHHHHHHHhhhccccCcCCCCCCCccccccc------
Confidence 4588999 99999999999999999999998 68999999999999999 6898 888874
Q ss_pred cccccccCCCC-cchHHHHHHHHHhhhhCCCcccccccC
Q 040960 80 TETLSDKNFGI-RKVDIINEIKGSLEKICPETVSCADII 117 (117)
Q Consensus 80 ~E~~a~~n~~l-~gfd~Id~iK~~lE~~CPgvVSCADIl 117 (117)
.|+++++|.++ +||++|+.||+++ |++||||||+
T Consensus 117 ~E~~~~~N~~l~~a~~~l~~iK~k~----p~~VScADil 151 (720)
T 1ub2_A 117 PLNSWPDNTNLDKARRLLWPIKQKY----GNKLSWADLI 151 (720)
T ss_dssp TGGGCGGGTTHHHHHHHTHHHHHHH----GGGSCHHHHH
T ss_pred hhccCccccCHHHHHHHHHHHHHHc----cCCccHHHHH
Confidence 59999999987 8999999999999 8999999985
No 12
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A*
Probab=99.89 E-value=2.6e-25 Score=182.35 Aligned_cols=75 Identities=28% Similarity=0.484 Sum_probs=69.8
Q ss_pred CCCCCcCcccC-CCccHHHHHHHHHHHHHHhCcCchhhhhhhhhccccc-------------cCCCCcccccCCCCCCcc
Q 040960 16 NGELVLHFYKK-SCPSAEMLVKEEMKRKMLSDISSAATILRLAFHDCQV-------------DGCDGSILLGNSNGITTE 81 (117)
Q Consensus 16 ~~~L~~~fY~~-sCP~aE~IV~~~v~~~~~~d~~~aa~lLRL~FHDCfV-------------~GCDaSiLL~~~~~~~~E 81 (117)
.++|+.+||++ +||++ ++.+|||+|||||| +||||||||+++ .|
T Consensus 21 ~~~L~~~fy~~~sCp~~------------------~~~llRLafHDc~ty~~sd~~~g~~~~gGcDGSIlL~~~----~E 78 (343)
T 1llp_A 21 LDDIQANMFHGGQCGAE------------------AHESIRLVFHDSIAISPAMEAKGKFGGGGADGSIMIFDT----IE 78 (343)
T ss_dssp HHHHHHHTSTTTCCSHH------------------HHHHHHHHHHHHTCCCHHHHHTTSCCCCSSSSHHHHTHH----HH
T ss_pred HHHHHHhhhccCCCchh------------------HHHHHHHHHhhhhccccccccccccCCCCCCceeccCCc----cc
Confidence 45799999999 99987 99999999999998 999999999864 69
Q ss_pred cccccCCCCcchHHHHHHHHHhhhhCCCcccccccC
Q 040960 82 TLSDKNFGIRKVDIINEIKGSLEKICPETVSCADII 117 (117)
Q Consensus 82 ~~a~~n~~l~gfd~Id~iK~~lE~~CPgvVSCADIl 117 (117)
+++++|.+|+ ++|+.+|..+|+. +|||||||
T Consensus 79 k~~~~N~~L~--~vi~~lk~~~e~~---~VScADii 109 (343)
T 1llp_A 79 TAFHPNIGLD--EVVAMQKPFVQKH---GVTPGDFI 109 (343)
T ss_dssp TTSGGGTTHH--HHHHHHHHHHHHH---TCCHHHHH
T ss_pred cCCccccCHH--HHHHHHHHHHHHc---CCCHHHHH
Confidence 9999999998 9999999999999 99999985
No 13
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A*
Probab=99.89 E-value=5.2e-25 Score=180.62 Aligned_cols=76 Identities=33% Similarity=0.475 Sum_probs=70.2
Q ss_pred cCCCCCcCcccC-CCccHHHHHHHHHHHHHHhCcCchhhhhhhhhccccc-------------cCCCCcccccCCCCCCc
Q 040960 15 GNGELVLHFYKK-SCPSAEMLVKEEMKRKMLSDISSAATILRLAFHDCQV-------------DGCDGSILLGNSNGITT 80 (117)
Q Consensus 15 ~~~~L~~~fY~~-sCP~aE~IV~~~v~~~~~~d~~~aa~lLRL~FHDCfV-------------~GCDaSiLL~~~~~~~~ 80 (117)
..++|+.+||++ +||++ ++.+|||+|||||| +||||||||+++ .
T Consensus 29 i~~~L~~~~y~~~sCp~~------------------a~~llRLafHDc~vy~~sd~~~g~~~~gGcDgSIll~~~----~ 86 (344)
T 2e39_A 29 VLDDLQTNFYQGSKCESP------------------VRKILRIVFHDAIGFSPALTAAGQFGGGGADGSIIAHSN----I 86 (344)
T ss_dssp HHHHHHHTTTTTTCCSHH------------------HHHHHHHHHHHHTCCCHHHHHTTSCCCCSSSSHHHHTHH----H
T ss_pred HHHHHHHHhccCCCccHH------------------HHHHHHHHHhhhhcccccccccccCCCCCCCceeecCCc----c
Confidence 345799999999 99988 99999999999999 999999999863 6
Q ss_pred ccccccCCCCcchHHHHHHHHHhhhhCCCcccccccC
Q 040960 81 ETLSDKNFGIRKVDIINEIKGSLEKICPETVSCADII 117 (117)
Q Consensus 81 E~~a~~n~~l~gfd~Id~iK~~lE~~CPgvVSCADIl 117 (117)
|+++++|.+|+ ++|+.||..+|+. +|||||||
T Consensus 87 Ek~~~~N~~L~--~vi~~lk~~~e~~---~VScADii 118 (344)
T 2e39_A 87 ELAFPANGGLT--DTIEALRAVGINH---GVSFGDLI 118 (344)
T ss_dssp HTTSGGGTTCH--HHHHHHHHHHHHH---TCCHHHHH
T ss_pred ccCcccccCHH--HHHHHHHHHHHHh---cCCHHHHH
Confidence 99999999998 9999999999999 99999985
No 14
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ...
Probab=99.87 E-value=5.7e-24 Score=168.94 Aligned_cols=77 Identities=23% Similarity=0.326 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHhCcCchhhhhhhhhccccccCCCCcccccCCCCC---CcccccccCCCC-cchHHHHHHHHHhhhhCC
Q 040960 33 MLVKEEMKRKMLSDISSAATILRLAFHDCQVDGCDGSILLGNSNGI---TTETLSDKNFGI-RKVDIINEIKGSLEKICP 108 (117)
Q Consensus 33 ~IV~~~v~~~~~~d~~~aa~lLRL~FHDCfV~GCDaSiLL~~~~~~---~~E~~a~~n~~l-~gfd~Id~iK~~lE~~CP 108 (117)
+.|++.|++. .+|++++|++|||+||||| |||+|+++++.++. .+|+++++|.++ +||++|+.||+++
T Consensus 28 ~~~r~~v~~~-~~d~~~aa~llRL~FHDc~--gcD~s~~~gg~~gsi~~~~E~~~~~N~~l~~g~~~i~~iK~~~----- 99 (261)
T 2vcn_A 28 EKAKKKLRGF-IAEKRCAPLMLRLAAHSAG--TFDKGTKTGGPFGTIKHPAELAHSANNGLDIAVRLLEPLKAEF----- 99 (261)
T ss_dssp CHHHHHHHHH-HHHHTCHHHHHHHHHHHHT--TCBTTTTBCSSSSGGGSHHHHTSGGGTTHHHHHHHHHHHHHTC-----
T ss_pred HHHHHHHHHH-HhCCCchHHHHHHHHccCC--CCCcccCCCCCCccccchhhccCccccCHHHHHHHHHHHHHHh-----
Confidence 3466777776 6789999999999999999 99999998876542 369999999999 7999999999999
Q ss_pred CcccccccC
Q 040960 109 ETVSCADII 117 (117)
Q Consensus 109 gvVSCADIl 117 (117)
++|||||||
T Consensus 100 ~~VScADil 108 (261)
T 2vcn_A 100 PILSYADFY 108 (261)
T ss_dssp TTSCHHHHH
T ss_pred CCCCHHHHH
Confidence 899999985
No 15
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3
Probab=99.86 E-value=1.7e-23 Score=184.66 Aligned_cols=92 Identities=20% Similarity=0.295 Sum_probs=84.3
Q ss_pred CCCCCcCc-ccCCCccHH-HHHHHHHHHHHHhC--------cCchhhhhhhhhccccc-------cCCC-CcccccCCCC
Q 040960 16 NGELVLHF-YKKSCPSAE-MLVKEEMKRKMLSD--------ISSAATILRLAFHDCQV-------DGCD-GSILLGNSNG 77 (117)
Q Consensus 16 ~~~L~~~f-Y~~sCP~aE-~IV~~~v~~~~~~d--------~~~aa~lLRL~FHDCfV-------~GCD-aSiLL~~~~~ 77 (117)
...|..+| |+++||++| ++|++.|++.+.++ +..+|.+|||+|||||| +||| |||++.
T Consensus 43 ~~pl~~~f~Y~~~~~~~d~~~vk~~v~~~~~~~~~~wp~d~~~~g~~liRlafHd~~t~~~sd~~gG~dggsir~~---- 118 (731)
T 1itk_A 43 VGPVEDDFDYAEEFQKLDLEAVKSDLEELMTSSQDWWPADYGHYGPLFIRMAWHSAGTYRTADGRGGAAGGRQRFA---- 118 (731)
T ss_dssp CSSCCTTCCHHHHHHHCCHHHHHHHHHHHHTCCBTTBCCGGGCCHHHHHHHHHHHHTTCCTTTCCCSSTTCGGGST----
T ss_pred cCCCCCCcchhhhcchHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHhhhccccCcCCCCCCCCccccch----
Confidence 34599999 999999999 99999999999998 68999999999999999 6898 888774
Q ss_pred CCcccccccCCCC-cchHHHHHHHHHhhhhCCCcccccccC
Q 040960 78 ITTETLSDKNFGI-RKVDIINEIKGSLEKICPETVSCADII 117 (117)
Q Consensus 78 ~~~E~~a~~n~~l-~gfd~Id~iK~~lE~~CPgvVSCADIl 117 (117)
.|++.++|.+| +||++|+.||+++ |++||||||+
T Consensus 119 --~e~~~~~N~~l~~~~~~l~~iK~~~----~~~VS~ADli 153 (731)
T 1itk_A 119 --PINSWPDNANLDKARRLLLPIKQKY----GQKISWADLM 153 (731)
T ss_dssp --TGGGCGGGTTHHHHHHHTHHHHHHH----GGGSCHHHHH
T ss_pred --hhccCccccchHHHHHHHHHHHHhc----cCCccHHHHH
Confidence 59999999987 8999999999998 8999999985
No 16
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A*
Probab=99.82 E-value=1.3e-21 Score=161.17 Aligned_cols=84 Identities=29% Similarity=0.434 Sum_probs=70.4
Q ss_pred cCCCccHHHHHHHHHHHHHHh--CcCchhhhhhhhhcccc----------ccCCCCcccccCCCCCCcccccccCCCCcc
Q 040960 25 KKSCPSAEMLVKEEMKRKMLS--DISSAATILRLAFHDCQ----------VDGCDGSILLGNSNGITTETLSDKNFGIRK 92 (117)
Q Consensus 25 ~~sCP~aE~IV~~~v~~~~~~--d~~~aa~lLRL~FHDCf----------V~GCDaSiLL~~~~~~~~E~~a~~n~~l~g 92 (117)
+.+|...+. |++.+++.+.. +...++.+|||+||||| ++||||||||+++ .|+++++|.+|+
T Consensus 11 ~~~cc~~~~-V~~di~~~l~~~~~g~~a~~llRLafHDc~t~~~~~g~~~~gGcDGSill~~~----~Ek~~~~N~gL~- 84 (357)
T 3m5q_A 11 HAACCAFIP-LAQDLQETIFQNECGEDAHEVIRLTFHDAIAISRSQGPKAGGGADGSMLLFPT----VEPNFSANNGID- 84 (357)
T ss_dssp CGGGTTHHH-HHHHHHHHTTTTCCSHHHHHHHHHHHHHHHCCCTTTCGGGCCSSSCHHHHSTT----TGGGSGGGTTTH-
T ss_pred CcccccHHH-HHHHHHHHHhcCCCchHHHHHHHHHHhhccccccccCCCCCCCCccccccCCc----cccCCccccCHH-
Confidence 345665554 66667776664 56689999999999999 6999999999753 599999999888
Q ss_pred hHHHHHHHHHhhhhCCCcccccccC
Q 040960 93 VDIINEIKGSLEKICPETVSCADII 117 (117)
Q Consensus 93 fd~Id~iK~~lE~~CPgvVSCADIl 117 (117)
++|+.||..+|+.| +|||||||
T Consensus 85 -~vid~lk~~~e~~~--~VScADii 106 (357)
T 3m5q_A 85 -DSVNNLIPFMQKHN--TISAADLV 106 (357)
T ss_dssp -HHHHHHHHHHHHST--TSCHHHHH
T ss_pred -HHHHHHHHHHHhcC--CCCHHHHH
Confidence 99999999999999 99999985
No 17
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A*
Probab=99.82 E-value=2.9e-21 Score=170.66 Aligned_cols=75 Identities=20% Similarity=0.330 Sum_probs=68.6
Q ss_pred HHHHHHHHhCcCchhhhhhhhhccccc-------cCCCC-cccccCCCCCCcccccccCC---CC-cchHHHHHHHHHhh
Q 040960 37 EEMKRKMLSDISSAATILRLAFHDCQV-------DGCDG-SILLGNSNGITTETLSDKNF---GI-RKVDIINEIKGSLE 104 (117)
Q Consensus 37 ~~v~~~~~~d~~~aa~lLRL~FHDCfV-------~GCDa-SiLL~~~~~~~~E~~a~~n~---~l-~gfd~Id~iK~~lE 104 (117)
+.|++.+.+++.+++.||||+|||||| +|||| ||+|+ .||+..+|. +| +||++|+.||+++|
T Consensus 456 ~~lk~~i~~~~~~~a~LlRlafHDc~tfr~sd~~GGcDGasI~L~------~Ek~~~~N~p~N~L~~~~~~le~IK~~~e 529 (740)
T 2cca_A 456 ASLKSQIRASGLTVSQLVSTAWAAASSFRGSDKRGGANGGRIRLQ------PQVGWEVNDPDGDLRKVIRTLEEIQESFN 529 (740)
T ss_dssp HHHHHHHHTTTCCHHHHHHHHHHHHTTCBTTTTBCSSTBCGGGST------TGGGCSTTCTTTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcHHHHHHHHHHHhccccCCCCCCCCCCceeecc------cccccccccchhhHHHHHHHHHHHHHHHh
Confidence 788999999999999999999999999 79999 89998 477777776 67 89999999999999
Q ss_pred hhCC--CcccccccC
Q 040960 105 KICP--ETVSCADII 117 (117)
Q Consensus 105 ~~CP--gvVSCADIl 117 (117)
++|| ++|||||||
T Consensus 530 ~~c~~~~~VScADii 544 (740)
T 2cca_A 530 SAAPGNIKVSFADLV 544 (740)
T ss_dssp HHCCTTBCCCHHHHH
T ss_pred hhccCCCCCCHHHHH
Confidence 9985 899999985
No 18
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A*
Probab=99.81 E-value=1.2e-20 Score=149.78 Aligned_cols=79 Identities=27% Similarity=0.384 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHHhCcCchhhhhhhhhc-----cccccCCCCcccccCCCCCCcccccccCCCCcchHHHHHHHHHhhhh
Q 040960 32 EMLVKEEMKRKMLSDISSAATILRLAFH-----DCQVDGCDGSILLGNSNGITTETLSDKNFGIRKVDIINEIKGSLEKI 106 (117)
Q Consensus 32 E~IV~~~v~~~~~~d~~~aa~lLRL~FH-----DCfV~GCDaSiLL~~~~~~~~E~~a~~n~~l~gfd~Id~iK~~lE~~ 106 (117)
.++||+.|++++.++++++|++|||+|| ||||+ |||+.- ++.....|+++++|. ||+.|+++|+.||++
T Consensus 9 ~~~vr~~v~~~~~~~~~~~a~llRl~fH~a~t~dc~~~--~gg~~g-~~~~~~~E~~~~~N~---gl~~i~~~~~~i~~~ 82 (271)
T 3riv_A 9 IRALRADIEDMISEKLELGPSLIRLAWHEAASYDCFKK--DGSPNS-ASMRFKPECLYAGNK---GLDIPRKALETLKKK 82 (271)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTCBTTTT--BSCTTT-TGGGSTTGGGSGGGT---TTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCchHHHHHHHHHhcccCCCCCCC--CCCCCc-ccccccccccccccc---CHHHHHHHHHHHHhc
Confidence 4689999999999999999999999999 99998 888821 112235799999996 799999999999999
Q ss_pred CCCcccccccC
Q 040960 107 CPETVSCADII 117 (117)
Q Consensus 107 CPgvVSCADIl 117 (117)
||+ |||||||
T Consensus 83 cp~-VScADii 92 (271)
T 3riv_A 83 YPQ-ISYADLW 92 (271)
T ss_dssp CTT-SCHHHHH
T ss_pred CCC-CCHHHHH
Confidence 996 9999985
No 19
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A*
Probab=99.78 E-value=2e-20 Score=152.82 Aligned_cols=82 Identities=28% Similarity=0.433 Sum_probs=68.7
Q ss_pred CCCccHHHHHHHHHHHHHHhCc---Cchhhhhhhhhccccc-------cCCCCcccccCCCCCCcccccccCCCCcchHH
Q 040960 26 KSCPSAEMLVKEEMKRKMLSDI---SSAATILRLAFHDCQV-------DGCDGSILLGNSNGITTETLSDKNFGIRKVDI 95 (117)
Q Consensus 26 ~sCP~aE~IV~~~v~~~~~~d~---~~aa~lLRL~FHDCfV-------~GCDaSiLL~~~~~~~~E~~a~~n~~l~gfd~ 95 (117)
.+|-. ..-|++.+++.+..+. ..++.+|||+|||||+ +|||||||++++ .|+++++|.+|+ ++
T Consensus 12 ~~cc~-~~~v~~di~~~l~~~g~~g~~a~~llRLafHDc~ty~~~d~~gGcDgSill~~~----~Ek~~~~N~gL~--~v 84 (331)
T 3fmu_A 12 AACCI-LFPILDDIQENLFDGAQCGEEVHESLRLTFHDAIGFSPTLGGGGADGSIIAFDT----IETNFPANAGID--EI 84 (331)
T ss_dssp GGGGG-HHHHHHHHHHHTSTTTCSSHHHHHHHHHHHHHHTCCBTTTBCCSSSSHHHHTHH----HHTTSGGGTTHH--HH
T ss_pred ccccC-HHHHHHHHHHHHhhCCCCChHHHHHHHHHHhhcccccCCCCCCCCchhhhcCCc----ccccCccccCHH--HH
Confidence 34544 4557778888877663 2678999999999997 999999999743 599999999887 99
Q ss_pred HHHHHHHhhhhCCCcccccccC
Q 040960 96 INEIKGSLEKICPETVSCADII 117 (117)
Q Consensus 96 Id~iK~~lE~~CPgvVSCADIl 117 (117)
|+.||..+|+. +|||||||
T Consensus 85 id~lk~~~e~~---~VScADii 103 (331)
T 3fmu_A 85 VSAQKPFVAKH---NISAGDFI 103 (331)
T ss_dssp HHHHHHHHHHS---SSCHHHHH
T ss_pred HHHHHHHHHHc---cCCHHHHH
Confidence 99999999998 99999985
No 20
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A
Probab=99.77 E-value=8.4e-20 Score=147.75 Aligned_cols=72 Identities=21% Similarity=0.270 Sum_probs=60.3
Q ss_pred HHHHHHHHHHhCcCchhhhhhhhhccccc-cCC------CC-cccccCCCCCCcccccccCCCC-cchHHHHHHHHHhhh
Q 040960 35 VKEEMKRKMLSDISSAATILRLAFHDCQV-DGC------DG-SILLGNSNGITTETLSDKNFGI-RKVDIINEIKGSLEK 105 (117)
Q Consensus 35 V~~~v~~~~~~d~~~aa~lLRL~FHDCfV-~GC------Da-SiLL~~~~~~~~E~~a~~n~~l-~gfd~Id~iK~~lE~ 105 (117)
-.+.|++.+.+++..+|++|||+|||||| +|| || ||.+ ..|+++++|.++ +||++|+.||++
T Consensus 32 di~~l~~~i~~~~~~~a~llRlafHDc~t~~~sd~~gG~nGa~ir~------~~Ek~~~~N~~~~~~~~~le~iK~~--- 102 (309)
T 1u2k_A 32 DIIDLKFAIADSGLSVSELVSVAWASASTFRGGDKRGGANGARLAL------MPQRDWDVNAAAVRALPVLEKIQKE--- 102 (309)
T ss_dssp HHHHHHHHHHTSCCCHHHHHHHHHHHHTTCCTTCSSCSSTBCGGGS------TTGGGCGGGTTHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHCCCcHHHHHhhcccccccccCcCCCCCCCcccccC------chhccccCCCcchhHHHHHHHHHHc---
Confidence 45678888999999999999999999998 333 33 2332 259999999977 899999999998
Q ss_pred hCCCcccccccC
Q 040960 106 ICPETVSCADII 117 (117)
Q Consensus 106 ~CPgvVSCADIl 117 (117)
|| +|||||||
T Consensus 103 -~p-~VScADii 112 (309)
T 1u2k_A 103 -SG-KASLADII 112 (309)
T ss_dssp -HC-SSCHHHHH
T ss_pred -CC-CccHHHHH
Confidence 98 99999985
No 21
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0
Probab=99.75 E-value=1.2e-19 Score=148.65 Aligned_cols=83 Identities=27% Similarity=0.305 Sum_probs=72.0
Q ss_pred cCCCccHHHHHHHHHHHHHHhCcC---chhhhhhhhhcccc-------------ccCCCCcccccCCCCCCcccccccCC
Q 040960 25 KKSCPSAEMLVKEEMKRKMLSDIS---SAATILRLAFHDCQ-------------VDGCDGSILLGNSNGITTETLSDKNF 88 (117)
Q Consensus 25 ~~sCP~aE~IV~~~v~~~~~~d~~---~aa~lLRL~FHDCf-------------V~GCDaSiLL~~~~~~~~E~~a~~n~ 88 (117)
+.+|...+. |++.|++.+.++.. .++.+|||+||||| ++|||||||++++ .|++.++|.
T Consensus 12 ~~~cc~~~~-V~~di~~~l~~~g~~g~~a~~lvRlafHda~Ty~~~~~~~g~~~~GGcDGSill~~~----~Ek~~~~N~ 86 (338)
T 3q3u_A 12 NAACCAWFP-VLDDIQANLFNGGKCEEEAHEAVRLTFHDAVGFSLAAQKAGKFGGGGADGSILAFSD----IETAFIPNF 86 (338)
T ss_dssp SGGGGGHHH-HHHHHHHHTSTTTCCSHHHHHHHHHHHHHHTSCCHHHHHTTSCCCCSSSSHHHHTHH----HHTTSGGGT
T ss_pred CCcCcCHHH-HHHHHHHHHhhCCCCchHHHHHHHHHHhhhhcccccccccccCCCCCCCCeeeeCCc----ccccCcccc
Confidence 456877665 88999999888755 46699999999999 7999999999743 599999999
Q ss_pred CCcchHHHHHHHHHhhhhCCCcccccccC
Q 040960 89 GIRKVDIINEIKGSLEKICPETVSCADII 117 (117)
Q Consensus 89 ~l~gfd~Id~iK~~lE~~CPgvVSCADIl 117 (117)
+|+ ++|+.+|..+|+. +||||||+
T Consensus 87 ~L~--~vi~~lk~~~e~~---~VS~ADli 110 (338)
T 3q3u_A 87 GLE--FTTEGFIPFALAH---GVSFGDFV 110 (338)
T ss_dssp THH--HHHHHHHHHHHHH---TCCHHHHH
T ss_pred CHH--HHHHHHHHHHHHh---cCCHHHHH
Confidence 887 9999999999998 99999985
No 22
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3
Probab=99.74 E-value=4.1e-19 Score=156.87 Aligned_cols=78 Identities=18% Similarity=0.239 Sum_probs=65.5
Q ss_pred HHHHHHHHHHhCcCchhhhhhhhhccccccCCCCcccccCCCCC-------CcccccccCC--CC-cchHHHHHHHHHhh
Q 040960 35 VKEEMKRKMLSDISSAATILRLAFHDCQVDGCDGSILLGNSNGI-------TTETLSDKNF--GI-RKVDIINEIKGSLE 104 (117)
Q Consensus 35 V~~~v~~~~~~d~~~aa~lLRL~FHDCfV~GCDaSiLL~~~~~~-------~~E~~a~~n~--~l-~gfd~Id~iK~~lE 104 (117)
....|++.+.+++.++|+||||+|||||+ |||| |.+++. ..||++++|. +| |||++|+.||+++|
T Consensus 445 di~~lk~~i~~~~~~~a~LvRlafHDc~t--~d~s---D~~GGanGasIrl~~Ek~~~~N~p~~L~r~~~vle~IK~~~e 519 (731)
T 1itk_A 445 EIAELKEEILDSDLSVSQLVKTAWASAST--YRDS---DKRGGANGARLRLEPQKNWEVNEPEQLETVLGTLENIQTEFN 519 (731)
T ss_dssp HHHHHHHHHHHSSCCHHHHHHHHHHHHTT--CBTT---TTBCCSTBCGGGSTTGGGCGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHhc--cccc---CCCCCCCccceecccccccccccchHHHHHHHHHHHHHHHHH
Confidence 46788999999999999999999999996 5555 333332 2599999998 56 89999999999999
Q ss_pred hhC--CCcccccccC
Q 040960 105 KIC--PETVSCADII 117 (117)
Q Consensus 105 ~~C--PgvVSCADIl 117 (117)
++| |++|||||||
T Consensus 520 ~~c~c~~~VScADii 534 (731)
T 1itk_A 520 DSRSDGTQVSLADLI 534 (731)
T ss_dssp HHCCSSBCCCHHHHH
T ss_pred HhccCCCCCCHHHHH
Confidence 985 6999999985
No 23
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3
Probab=99.71 E-value=1.7e-18 Score=152.76 Aligned_cols=69 Identities=16% Similarity=0.293 Sum_probs=61.3
Q ss_pred HHHHHHHHhCcCchhhhhhhhhccccc-cC------CCC-cccccCCCCCCcccccccCCC--C-cchHHHHHHHHHhhh
Q 040960 37 EEMKRKMLSDISSAATILRLAFHDCQV-DG------CDG-SILLGNSNGITTETLSDKNFG--I-RKVDIINEIKGSLEK 105 (117)
Q Consensus 37 ~~v~~~~~~d~~~aa~lLRL~FHDCfV-~G------CDa-SiLL~~~~~~~~E~~a~~n~~--l-~gfd~Id~iK~~lE~ 105 (117)
+.|++++.+++.++|++|||+|||||| +| ||| ||+|+ .||++++|.+ + |||++|+.||+++|
T Consensus 446 ~~vk~~i~~~~~~~a~LlRlafHDc~v~rg~D~~gGadGasI~l~------~Ek~~~~N~~~~l~r~~~vle~IKa~~e- 518 (720)
T 1ub2_A 446 QAVKDRIAASGLSISELVSTAWDSARTYRNSDKRGGANGARIRLA------PQKDWEGNEPDRLPKVLAVLEGISAATG- 518 (720)
T ss_dssp HHHHHHHHHSCCCHHHHHHHHHHHHTTCBTTTTBCSSTBTGGGST------TGGGCGGGCTTHHHHHHHHHHHHHHHSS-
T ss_pred HHHHHHHHhCCCcHHHHHHHHHhHhccccCCCCCCCCCCcceecc------cccccccccchHHHHHHHHHHHHHHHcC-
Confidence 788999999999999999999999999 54 556 77765 5999999983 5 99999999999998
Q ss_pred hCCCcccccccC
Q 040960 106 ICPETVSCADII 117 (117)
Q Consensus 106 ~CPgvVSCADIl 117 (117)
|||||||
T Consensus 519 -----VScADii 525 (720)
T 1ub2_A 519 -----ATVADVI 525 (720)
T ss_dssp -----CCHHHHH
T ss_pred -----CCHHHHH
Confidence 9999985
No 24
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ...
Probab=99.67 E-value=2e-17 Score=133.17 Aligned_cols=80 Identities=21% Similarity=0.335 Sum_probs=67.7
Q ss_pred CCCccHHHHHHHHHHHHHHhCc------Cchhhhhhhhhcccc-------ccCCC-CcccccCCCCCCcccccccCCCC-
Q 040960 26 KSCPSAEMLVKEEMKRKMLSDI------SSAATILRLAFHDCQ-------VDGCD-GSILLGNSNGITTETLSDKNFGI- 90 (117)
Q Consensus 26 ~sCP~aE~IV~~~v~~~~~~d~------~~aa~lLRL~FHDCf-------V~GCD-aSiLL~~~~~~~~E~~a~~n~~l- 90 (117)
+|+++.+ .|++.+.+.+..++ ..+|.+|||+||||+ .+||| |||++. .|++.++|.+|
T Consensus 14 ~~~~d~~-~v~~di~~~~~~~~~~~d~~~~~~~lvRlawHda~Tyr~~d~~GGadg~~ir~~------pEk~~~~N~~L~ 86 (294)
T 3e2o_A 14 RSYEDFQ-KVYNAIALKLREDDEYDNYIGYGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFK------KEFNDPSNAGLQ 86 (294)
T ss_dssp CCHHHHH-HHHHHHHHHHHHCTTHHHHTCSHHHHHHHHHHHHTTCBTTTTBSSSTTCGGGSH------HHHTCGGGTTTH
T ss_pred CCHHHHH-HHHHHHHHHHhcCcccccccchHHHHHHHHHHHhcccccCCCCCCCCcceeccc------cccCCccccchH
Confidence 4566654 47777787777776 689999999999998 68999 789875 59999999988
Q ss_pred cchHHHHHHHHHhhhhCCCcccccccC
Q 040960 91 RKVDIINEIKGSLEKICPETVSCADII 117 (117)
Q Consensus 91 ~gfd~Id~iK~~lE~~CPgvVSCADIl 117 (117)
+||++|+.||+++ | +||||||+
T Consensus 87 ~~~~~le~iK~~~----~-~VS~ADli 108 (294)
T 3e2o_A 87 NGFKFLEPIHKEF----P-WISSGDLF 108 (294)
T ss_dssp HHHHHHHHHHHHC----T-TSCHHHHH
T ss_pred HHHHHHHHHHHhC----C-CCCHHHHH
Confidence 8999999999986 6 99999985
No 25
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15}
Probab=99.64 E-value=2.8e-17 Score=145.67 Aligned_cols=91 Identities=21% Similarity=0.254 Sum_probs=81.4
Q ss_pred CCCCcCc-ccCCCccHH-HHHHHHHHHHHHhCc--------Cchhhhhhhhhccc-------cccCC-CCcccccCCCCC
Q 040960 17 GELVLHF-YKKSCPSAE-MLVKEEMKRKMLSDI--------SSAATILRLAFHDC-------QVDGC-DGSILLGNSNGI 78 (117)
Q Consensus 17 ~~L~~~f-Y~~sCP~aE-~IV~~~v~~~~~~d~--------~~aa~lLRL~FHDC-------fV~GC-DaSiLL~~~~~~ 78 (117)
.++..+| |++.|++++ +.|++.+++.+..+. ..+|.+|||+|||| +.+|| ||||+++
T Consensus 67 ~p~~~~f~y~~~~~~~d~~avk~di~~~~~~~~~~wp~d~g~~gp~lvRlawHdagTy~~~d~~GGanggsirf~----- 141 (764)
T 3ut2_A 67 NPLGGDFDYAEAFQSLDYEAVKKDIAALMTESQDWWPADFGNYGGLFVRMAXHSAGTYRAMDGRGGGGMGQQRFA----- 141 (764)
T ss_dssp CTTCTTCCHHHHHHTSCHHHHHHHHHHHHTCCBTTBCCGGGCCHHHHHHHHHHHHTTCCTTTCCCSSTTCGGGST-----
T ss_pred CCCCCCCcHHHHhhHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHhhcccccccCCCCCCCCCCCeeecc-----
Confidence 4577889 999999987 899999999988865 68999999999999 46899 7999985
Q ss_pred CcccccccCCCC-cchHHHHHHHHHhhhhCCCcccccccC
Q 040960 79 TTETLSDKNFGI-RKVDIINEIKGSLEKICPETVSCADII 117 (117)
Q Consensus 79 ~~E~~a~~n~~l-~gfd~Id~iK~~lE~~CPgvVSCADIl 117 (117)
.|++.++|.+| ++|++|+.||+++ |++||||||+
T Consensus 142 -pE~~~~~N~gL~~~~~~l~~IK~~~----p~~VScADLi 176 (764)
T 3ut2_A 142 -PLNSWPDNQNLDKARRLIWPIKQKY----GNKISWADLM 176 (764)
T ss_dssp -TGGGCGGGTTHHHHHHHHHHHHHHH----GGGSCHHHHH
T ss_pred -cccCCccccCHHHHHHHHHHHHHHh----cCCcCHHHHH
Confidence 49999999988 7999999999998 8999999985
No 26
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A*
Probab=99.61 E-value=7.4e-17 Score=142.58 Aligned_cols=91 Identities=20% Similarity=0.310 Sum_probs=79.8
Q ss_pred CCCCcCc-ccCCCccHH-HHHHHHHHHHHHhCc--------Cchhhhhhhhhcccc-------ccCC-CCcccccCCCCC
Q 040960 17 GELVLHF-YKKSCPSAE-MLVKEEMKRKMLSDI--------SSAATILRLAFHDCQ-------VDGC-DGSILLGNSNGI 78 (117)
Q Consensus 17 ~~L~~~f-Y~~sCP~aE-~IV~~~v~~~~~~d~--------~~aa~lLRL~FHDCf-------V~GC-DaSiLL~~~~~~ 78 (117)
.++..+| |++.+.+.+ +.|++.+++.+.... ..+|.+|||+||||+ ++|| ||||+++
T Consensus 44 ~p~~~~f~y~~~~~~~d~~~vk~di~~~~~~~~~~wpad~g~~gp~lvRlawHdagTy~~~d~~GGanggsirf~----- 118 (737)
T 3vli_A 44 GPVEDDFDYAEEFQKLDLEAVKSDLEELMTSSQDWWPADYGHYGPLFIRMAWHSAGTYRTADGRGGAAGGRQRFA----- 118 (737)
T ss_dssp SSCCTTCCHHHHHHHCCHHHHHHHHHHHHTCCBTTBCCGGGCCHHHHHHHHHHHHTTCCTTTCCSSSTTCGGGST-----
T ss_pred CCCCCCCChHHHhccccHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHhccccccCCCCCCCCCeEecc-----
Confidence 4577888 998888775 789999999988764 679999999999994 7899 5999986
Q ss_pred CcccccccCCCC-cchHHHHHHHHHhhhhCCCcccccccC
Q 040960 79 TTETLSDKNFGI-RKVDIINEIKGSLEKICPETVSCADII 117 (117)
Q Consensus 79 ~~E~~a~~n~~l-~gfd~Id~iK~~lE~~CPgvVSCADIl 117 (117)
.|++.++|.+| ++|++|+.||+++ |++|||||||
T Consensus 119 -pEk~~~~N~gL~~~~~~le~IK~~~----p~~VScADLi 153 (737)
T 3vli_A 119 -PINSWPDNANLDKARRLLLPIKQKY----GQKISWADLM 153 (737)
T ss_dssp -TGGGCGGGTTHHHHHHHTHHHHHHH----GGGSCHHHHH
T ss_pred -cccCCccccchHHHHHHHHHHHHhc----cCCcCHHHHH
Confidence 49999999988 7999999999998 8999999985
No 27
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A*
Probab=99.58 E-value=2.2e-16 Score=139.74 Aligned_cols=91 Identities=18% Similarity=0.300 Sum_probs=80.1
Q ss_pred CCCCcCc-ccCCCccHHH-HHHHHHHHHHHhCc--------Cchhhhhhhhhcccc-------ccCC-CCcccccCCCCC
Q 040960 17 GELVLHF-YKKSCPSAEM-LVKEEMKRKMLSDI--------SSAATILRLAFHDCQ-------VDGC-DGSILLGNSNGI 78 (117)
Q Consensus 17 ~~L~~~f-Y~~sCP~aE~-IV~~~v~~~~~~d~--------~~aa~lLRL~FHDCf-------V~GC-DaSiLL~~~~~~ 78 (117)
.+|..+| |++.|++++- .|++.+.+.+.+.+ ..+|.+|||.||||+ .+|| ||||++.
T Consensus 60 ~p~~~~f~y~~~~~~~D~~~vk~~I~~~~~~~~~~wp~d~g~~gp~lvRlawHdagTy~~~d~~GGa~ggsirf~----- 134 (748)
T 3n3r_A 60 DPMGKDFNYAQAFEKLDLAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAXHSAGTYRTADGRGGAGEGQQRFA----- 134 (748)
T ss_dssp CCSCTTCCHHHHHHTSCHHHHHHHHHHHHTCCBTTBCCGGGCCHHHHHHHHHHHHTTCCTTTCCCSSTTCGGGST-----
T ss_pred CCCCCCCcHHHHhhHhhHHHHHHHHHHHHhcccccccccccchhHHHHHHhhcccccccCCCCCCCCCCCceecC-----
Confidence 4577889 9999988854 89999999998875 689999999999996 4899 7999985
Q ss_pred CcccccccCCCC-cchHHHHHHHHHhhhhCCCcccccccC
Q 040960 79 TTETLSDKNFGI-RKVDIINEIKGSLEKICPETVSCADII 117 (117)
Q Consensus 79 ~~E~~a~~n~~l-~gfd~Id~iK~~lE~~CPgvVSCADIl 117 (117)
.|++.++|.+| ++|++|+.||+++ |++|||||||
T Consensus 135 -pE~~~~~N~gL~~~~~~l~~IK~~~----p~~VScADli 169 (748)
T 3n3r_A 135 -PLNSWPDNANLDKARRLLWPIKQKY----GRAISWADLL 169 (748)
T ss_dssp -TGGGCGGGTTHHHHHHHTHHHHHHH----GGGSCHHHHH
T ss_pred -cccCCcccccHHHHHHHHHHHHHhc----cCCcCHHHHH
Confidence 49999999988 7999999999998 8999999985
No 28
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A*
Probab=99.47 E-value=1.3e-14 Score=128.40 Aligned_cols=74 Identities=20% Similarity=0.320 Sum_probs=64.5
Q ss_pred HHHHHHHhCcCchhhhhhhhhcccc-------ccCCCC-cccccCCCCCCcccccccCC--CC-cchHHHHHHHHHhhhh
Q 040960 38 EMKRKMLSDISSAATILRLAFHDCQ-------VDGCDG-SILLGNSNGITTETLSDKNF--GI-RKVDIINEIKGSLEKI 106 (117)
Q Consensus 38 ~v~~~~~~d~~~aa~lLRL~FHDCf-------V~GCDa-SiLL~~~~~~~~E~~a~~n~--~l-~gfd~Id~iK~~lE~~ 106 (117)
.+++.+......++.+||+.||||. .+|||| ||.+. .||+..+|. +| ++|++|+.||+++|++
T Consensus 448 ~lk~~~~~~g~~~~~lvRlAwhdA~Tf~~sd~~GGanGasIrl~------pEk~~~~N~p~gL~~~~~vle~IK~~~e~~ 521 (737)
T 3vli_A 448 ELKEEILDSDLSVSQLVKTAWASASTYRDSDKRGGANGARLRLE------PQKNWEVNEPEQLETVLGTLENIQTEFNDS 521 (737)
T ss_dssp HHHHHHHHSSCCHHHHHHHHHHHHTTCBTTTTBCSSTBCGGGST------TGGGCGGGCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHhhcccccccCCcCCCCcceEEec------ccccccCcchhHHHHHHHHHHHHHHHHHhh
Confidence 3466666777789999999999994 689998 99985 499999998 66 7999999999999999
Q ss_pred CC--CcccccccC
Q 040960 107 CP--ETVSCADII 117 (117)
Q Consensus 107 CP--gvVSCADIl 117 (117)
|| ++|||||||
T Consensus 522 c~~~~~VScADlI 534 (737)
T 3vli_A 522 RSDGTQVSLADLI 534 (737)
T ss_dssp CCSSBCCCHHHHH
T ss_pred cCCCCcccHHHHH
Confidence 97 699999985
No 29
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A*
Probab=99.36 E-value=2.1e-13 Score=120.87 Aligned_cols=74 Identities=22% Similarity=0.337 Sum_probs=62.5
Q ss_pred HHHHHHHhCcCchhhhhhhhhccc-------cccCCCC-cccccCCCCCCcccccccCC--CC-cchHHHHHHHHHhhhh
Q 040960 38 EMKRKMLSDISSAATILRLAFHDC-------QVDGCDG-SILLGNSNGITTETLSDKNF--GI-RKVDIINEIKGSLEKI 106 (117)
Q Consensus 38 ~v~~~~~~d~~~aa~lLRL~FHDC-------fV~GCDa-SiLL~~~~~~~~E~~a~~n~--~l-~gfd~Id~iK~~lE~~ 106 (117)
.+++.+....-.++.++|+.|||+ .-+|+|| ||.+. .||+..+|. +| ++|++|+.||+++|++
T Consensus 465 ~lk~~~~~~gl~~~~lvrlAwhdA~Tf~~sd~~GGanGa~Ir~~------pEk~~~~N~p~~L~~~~~vle~IK~~~e~~ 538 (748)
T 3n3r_A 465 ELKAKVLASGLTVSQLVSTAWAAASTFRGSDKRGGANGARIRLA------PQKDWEANQPEQLAAVLETLEAIRTAFNGA 538 (748)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHTTCCTTTCCCSSTBCGGGST------TGGGCGGGCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHhccccccCCCCCCCCceEEcc------ccccccCcchHHHHHHHHHHHHHHHHHHHh
Confidence 344555555667999999999999 3579998 88875 599999998 66 8999999999999999
Q ss_pred CC--CcccccccC
Q 040960 107 CP--ETVSCADII 117 (117)
Q Consensus 107 CP--gvVSCADIl 117 (117)
|| ++|||||||
T Consensus 539 c~~~~~VScADiI 551 (748)
T 3n3r_A 539 QRGGKQVSLADLI 551 (748)
T ss_dssp CSTTCCCCHHHHH
T ss_pred cCCCCcccHHHHH
Confidence 97 599999985
No 30
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15}
Probab=99.34 E-value=3.6e-13 Score=119.56 Aligned_cols=72 Identities=22% Similarity=0.311 Sum_probs=61.0
Q ss_pred HHHHHHhC-cCchhhhhhhhhccc-------cccCCCC-cccccCCCCCCcccccccCC--CC-cchHHHHHHHHHhhhh
Q 040960 39 MKRKMLSD-ISSAATILRLAFHDC-------QVDGCDG-SILLGNSNGITTETLSDKNF--GI-RKVDIINEIKGSLEKI 106 (117)
Q Consensus 39 v~~~~~~d-~~~aa~lLRL~FHDC-------fV~GCDa-SiLL~~~~~~~~E~~a~~n~--~l-~gfd~Id~iK~~lE~~ 106 (117)
+++.+... .-.++.+||+.|||+ ..+|||| ||.+. .||+.++|. +| ++|++|+.||+++|++
T Consensus 479 lk~~~~~~~gl~~~~lvrlAwhdA~Tf~~sd~~GGanGasIrl~------pEk~~~~N~p~~L~~~~~vle~Ik~~~e~~ 552 (764)
T 3ut2_A 479 LKAAILSTDGLDVSKLASTAMACATTYRNSDKRGGCNGARIALE------PQRNWVSNNPTQLSAVLDALKKVQSDFNGS 552 (764)
T ss_dssp HHHHHHTSTTCCHHHHHHHHHHHHTTCBTTTTBCSSTBCGGGST------TGGGCGGGCHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHhcCCCCHHHHHHHHHhhccccccccccCCCCcceEEec------cccccccccchhHHHHHHHHHHHHHHHHhc
Confidence 44444444 456899999999999 5689998 99985 499999998 66 8999999999999999
Q ss_pred CCC--cccccccC
Q 040960 107 CPE--TVSCADII 117 (117)
Q Consensus 107 CPg--vVSCADIl 117 (117)
|| +|||||||
T Consensus 553 -~g~~~VScADlI 564 (764)
T 3ut2_A 553 -NGNKKVSLADLI 564 (764)
T ss_dssp -STTBCCCHHHHH
T ss_pred -CCCCcccHHHHH
Confidence 87 99999985
No 31
>2k5e_A Uncharacterized protein; helix protein, structural genomic, structural genomics, PSI-2, protein structure initiative; NMR {Methanococcus jannaschii}
Probab=56.19 E-value=6.5 Score=24.67 Aligned_cols=28 Identities=18% Similarity=0.474 Sum_probs=22.8
Q ss_pred HHHHHHhCcCchhhhhhhhhccccccCCCCc
Q 040960 39 MKRKMLSDISSAATILRLAFHDCQVDGCDGS 69 (117)
Q Consensus 39 v~~~~~~d~~~aa~lLRL~FHDCfV~GCDaS 69 (117)
|.+.++++|..++-+.+.-| ||| ||-||
T Consensus 11 I~eiv~~~P~~~~vf~~~G~-~c~--~C~~a 38 (73)
T 2k5e_A 11 FAQALQTHPGVAGVLRSYNL-GCI--GCMGA 38 (73)
T ss_dssp HHHHHHHCTHHHHHHHHTTG-GGG--GTTTG
T ss_pred HHHHHHHCHHHHHHHHHcCC-CCC--CCCcc
Confidence 66677888988888888887 788 88887
No 32
>1mr1_C SKI oncogene, SKI, C-SKI; SMAD, cancer, TGF-B signaling, protein interaction, signaling protein; 2.85A {Homo sapiens} SCOP: d.217.1.2
Probab=46.49 E-value=4.7 Score=27.54 Aligned_cols=19 Identities=21% Similarity=0.628 Sum_probs=15.7
Q ss_pred hhccccccCCCCcccccCCC
Q 040960 57 AFHDCQVDGCDGSILLGNSN 76 (117)
Q Consensus 57 ~FHDCfV~GCDaSiLL~~~~ 76 (117)
..|+|| .||.|+......+
T Consensus 6 V~HeC~-g~c~G~f~P~~Y~ 24 (99)
T 1mr1_C 6 VYHECF-GKCKGLLVPELYS 24 (99)
T ss_dssp EEECST-TCEEEEECGGGCC
T ss_pred EEEEec-CccceEecccccC
Confidence 469999 8999999987654
No 33
>2k53_A A3DK08 protein; NESG, CMR9, structural genomics, PSI-2, protein structure initiative; NMR {Clostridium thermocellum atcc 27405}
Probab=31.07 E-value=43 Score=20.95 Aligned_cols=27 Identities=22% Similarity=0.533 Sum_probs=22.8
Q ss_pred HHHHHHhCcCchhhhhhhhhccccccCCCC
Q 040960 39 MKRKMLSDISSAATILRLAFHDCQVDGCDG 68 (117)
Q Consensus 39 v~~~~~~d~~~aa~lLRL~FHDCfV~GCDa 68 (117)
|.+.++++|.+++-+.+.-++ |+ ||-+
T Consensus 9 I~eIv~~~P~~~~vf~~~G~~-C~--gC~~ 35 (76)
T 2k53_A 9 IADVLQMDRGTAPIFINNGMH-CL--GCPS 35 (76)
T ss_dssp HHHHHHHCGGGHHHHHHTTCC-CC--SSCC
T ss_pred HHHHHHHCHHHHHHHHHcCCC-CC--CCCc
Confidence 667788899999999999998 87 7765
No 34
>3b4s_A Protein LUXT; APC91483.1, LUXT domain, structural genomics, PSI-2, protein structure initiative; 3.10A {Vibrio parahaemolyticus rimd 2210633}
Probab=28.22 E-value=14 Score=24.83 Aligned_cols=14 Identities=43% Similarity=0.525 Sum_probs=11.4
Q ss_pred chhhhhhhhhc-ccc
Q 040960 49 SAATILRLAFH-DCQ 62 (117)
Q Consensus 49 ~aa~lLRL~FH-DCf 62 (117)
.=-++|||+|| =|.
T Consensus 36 eF~aIlrL~F~hi~~ 50 (94)
T 3b4s_A 36 EFLAILRLLFHHIVT 50 (94)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc
Confidence 36789999999 774
No 35
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=20.36 E-value=79 Score=17.86 Aligned_cols=9 Identities=33% Similarity=0.788 Sum_probs=7.4
Q ss_pred CcccCCCcc
Q 040960 22 HFYKKSCPS 30 (117)
Q Consensus 22 ~fY~~sCP~ 30 (117)
.||+.+||.
T Consensus 7 ~f~~~~C~~ 15 (85)
T 1nho_A 7 VFTSPTCPY 15 (85)
T ss_dssp EESCSSSCC
T ss_pred EEECCCCcc
Confidence 589999884
Done!