Query 040962
Match_columns 247
No_of_seqs 178 out of 1237
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 03:21:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040962.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040962hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1czf_A Polygalacturonase II; b 100.0 7.1E-48 2.4E-52 344.7 27.9 225 1-235 128-358 (362)
2 1nhc_A Polygalacturonase I; be 100.0 2.1E-47 7.1E-52 339.1 29.7 225 1-235 102-332 (336)
3 1ia5_A Polygalacturonase; glyc 100.0 3.1E-47 1.1E-51 338.3 29.8 224 1-235 106-335 (339)
4 2iq7_A Endopolygalacturonase; 100.0 2.3E-47 8E-52 339.1 29.0 226 1-235 102-333 (339)
5 1bhe_A PEHA, polygalacturonase 100.0 2.3E-47 7.8E-52 343.8 28.5 217 1-235 153-374 (376)
6 1hg8_A Endopolygalacturonase; 100.0 1.5E-46 5E-51 335.0 30.9 225 2-235 105-345 (349)
7 1rmg_A Rgase A, rhamnogalactur 100.0 8.8E-46 3E-50 337.4 30.7 224 2-236 130-356 (422)
8 1k5c_A Endopolygalacturonase; 100.0 7.7E-47 2.6E-51 334.8 22.0 209 2-222 100-319 (335)
9 3jur_A EXO-poly-alpha-D-galact 100.0 1.1E-45 3.6E-50 338.5 24.9 208 1-221 192-414 (448)
10 2uvf_A Exopolygalacturonase; G 100.0 1.8E-41 6E-46 321.6 28.1 239 1-245 333-608 (608)
11 1x0c_A Isopullulanase; glycosi 100.0 2.1E-33 7.1E-38 262.6 19.0 197 5-220 290-521 (549)
12 1ogo_X Dextranase; hydrolase, 100.0 2.9E-33 1E-37 261.7 18.5 187 6-220 331-546 (574)
13 2x6w_A Tail spike protein; vir 100.0 9.2E-31 3.1E-35 242.7 12.6 182 2-221 180-385 (600)
14 3jur_A EXO-poly-alpha-D-galact 99.9 6E-27 2.1E-31 214.4 16.4 205 1-220 215-444 (448)
15 1ia5_A Polygalacturonase; glyc 99.9 7.4E-24 2.5E-28 187.9 26.6 200 6-230 70-306 (339)
16 2iq7_A Endopolygalacturonase; 99.9 9.3E-24 3.2E-28 187.3 26.1 200 6-230 66-304 (339)
17 1czf_A Polygalacturonase II; b 99.9 4.1E-24 1.4E-28 190.9 23.3 202 2-230 90-329 (362)
18 2uvf_A Exopolygalacturonase; G 99.9 1.2E-23 4E-28 199.5 24.4 199 1-218 356-583 (608)
19 1nhc_A Polygalacturonase I; be 99.9 5.1E-23 1.7E-27 182.4 26.3 199 6-230 66-303 (336)
20 1rmg_A Rgase A, rhamnogalactur 99.9 6.7E-22 2.3E-26 180.0 28.8 169 24-221 129-311 (422)
21 1hg8_A Endopolygalacturonase; 99.9 3.9E-22 1.3E-26 177.4 25.3 203 2-230 64-316 (349)
22 1k5c_A Endopolygalacturonase; 99.9 6.9E-23 2.4E-27 181.2 18.6 199 2-230 61-300 (335)
23 1bhe_A PEHA, polygalacturonase 99.9 1.4E-21 4.9E-26 175.5 27.4 195 2-220 103-338 (376)
24 3gq8_A Preneck appendage prote 99.9 3.3E-22 1.1E-26 186.4 18.8 151 24-192 136-309 (609)
25 3gqn_A Preneck appendage prote 99.9 3.2E-22 1.1E-26 189.4 16.9 151 24-192 136-309 (772)
26 1h80_A IOTA-carrageenase; hydr 99.9 5E-22 1.7E-26 182.0 16.3 204 5-219 106-360 (464)
27 1ogo_X Dextranase; hydrolase, 99.8 3E-19 1E-23 167.2 13.3 191 1-219 279-512 (574)
28 1x0c_A Isopullulanase; glycosi 99.8 9.7E-19 3.3E-23 163.5 14.4 196 2-221 238-483 (549)
29 1h80_A IOTA-carrageenase; hydr 99.7 1.7E-15 5.7E-20 138.8 16.5 149 28-200 106-278 (464)
30 3gq8_A Preneck appendage prote 99.5 1.5E-13 5.2E-18 128.3 17.0 169 26-221 101-310 (609)
31 3gqn_A Preneck appendage prote 99.5 2.5E-13 8.4E-18 129.0 15.4 169 26-221 101-310 (772)
32 2x6w_A Tail spike protein; vir 99.5 2.3E-14 7.8E-19 133.3 7.9 172 2-221 144-344 (600)
33 2pyg_A Poly(beta-D-mannuronate 99.5 1.4E-12 4.7E-17 116.6 16.8 192 5-221 131-361 (377)
34 2vbk_A Tailspike-protein; vira 99.5 7.2E-14 2.5E-18 124.6 8.1 122 4-152 175-316 (514)
35 2pyg_A Poly(beta-D-mannuronate 99.4 8.1E-11 2.8E-15 105.1 20.0 135 12-160 133-278 (377)
36 3eqn_A Glucan 1,3-beta-glucosi 98.6 3.6E-06 1.2E-10 80.2 18.7 168 4-189 156-327 (758)
37 1pcl_A Pectate lyase E; lyase 98.6 1.4E-06 4.8E-11 77.1 15.0 114 7-123 79-227 (355)
38 1pxz_A Major pollen allergen J 98.4 1.1E-06 3.8E-11 77.6 10.8 100 22-122 105-225 (346)
39 1vbl_A Pectate lyase 47; PL 47 98.4 9.7E-07 3.3E-11 79.6 9.9 114 7-123 131-282 (416)
40 1air_A Pectate lyase C, PELC; 98.4 8.7E-07 3E-11 78.4 8.8 111 8-123 89-215 (353)
41 3vmv_A Pectate lyase; polysacc 98.3 3.6E-06 1.2E-10 73.5 11.0 97 23-122 95-203 (326)
42 2o04_A Pectate lyase, PL; hexa 98.3 2.1E-06 7.2E-11 77.1 9.6 113 7-123 126-276 (399)
43 3zsc_A Pectate trisaccharide-l 98.3 6.8E-06 2.3E-10 72.1 12.4 117 7-123 67-194 (340)
44 2qy1_A Pectate lyase II; GAG l 98.3 3.5E-06 1.2E-10 74.0 9.9 101 22-123 85-204 (330)
45 1pe9_A Pectate lyase A; parall 98.2 9.2E-06 3.1E-10 72.0 11.3 114 7-123 86-238 (361)
46 3eqn_A Glucan 1,3-beta-glucosi 98.1 9.3E-05 3.2E-09 70.6 16.1 136 32-188 156-298 (758)
47 2vbk_A Tailspike-protein; vira 98.0 2.2E-05 7.5E-10 70.4 9.9 133 3-165 141-294 (514)
48 1ru4_A Pectate lyase, PEL9A; p 98.0 2.1E-05 7E-10 70.8 9.9 58 6-68 113-171 (400)
49 1idk_A Pectin lyase A; signal, 98.0 2.9E-05 9.9E-10 68.8 10.6 106 7-123 107-233 (359)
50 1qcx_A Pectin lyase B; beta-he 97.8 0.00013 4.5E-09 64.6 10.7 105 8-123 108-233 (359)
51 3zsc_A Pectate trisaccharide-l 97.6 0.0024 8.3E-08 55.9 15.6 106 2-122 85-215 (340)
52 1pxz_A Major pollen allergen J 97.6 0.00061 2.1E-08 60.0 11.7 129 2-153 108-271 (346)
53 1pcl_A Pectate lyase E; lyase 97.6 0.0026 9E-08 56.1 15.7 91 2-92 98-226 (355)
54 1ru4_A Pectate lyase, PEL9A; p 97.5 0.00066 2.3E-08 60.9 11.3 61 25-91 110-171 (400)
55 2inu_A Insulin fructotransfera 97.3 0.0019 6.3E-08 57.6 11.6 110 8-131 136-261 (410)
56 1qcx_A Pectin lyase B; beta-he 97.3 0.0016 5.6E-08 57.5 10.8 133 2-156 126-282 (359)
57 1idk_A Pectin lyase A; signal, 97.3 0.0011 3.6E-08 58.7 9.3 135 2-157 126-283 (359)
58 1air_A Pectate lyase C, PELC; 97.3 0.00094 3.2E-08 58.9 8.7 93 49-153 102-215 (353)
59 2qy1_A Pectate lyase II; GAG l 96.8 0.0043 1.5E-07 54.2 8.6 118 2-129 88-233 (330)
60 1pe9_A Pectate lyase A; parall 96.7 0.0029 9.8E-08 55.9 6.8 74 50-131 103-214 (361)
61 3vmv_A Pectate lyase; polysacc 96.6 0.011 3.8E-07 51.5 9.7 135 1-148 96-249 (326)
62 2o04_A Pectate lyase, PL; hexa 96.6 0.0034 1.2E-07 56.2 6.6 111 2-123 145-298 (399)
63 1vbl_A Pectate lyase 47; PL 47 96.6 0.0046 1.6E-07 55.6 7.1 111 2-122 150-303 (416)
64 2inu_A Insulin fructotransfera 96.5 0.011 3.8E-07 52.7 9.3 112 2-129 164-281 (410)
65 1gq8_A Pectinesterase; hydrola 96.2 0.12 3.9E-06 44.9 13.5 116 25-154 89-210 (319)
66 1gq8_A Pectinesterase; hydrola 96.1 0.041 1.4E-06 47.7 10.3 134 6-156 92-246 (319)
67 1xg2_A Pectinesterase 1; prote 95.9 0.036 1.2E-06 48.0 9.0 115 25-153 85-205 (317)
68 1xg2_A Pectinesterase 1; prote 95.9 0.12 4E-06 44.8 12.2 76 6-91 88-169 (317)
69 3t9g_A Pectate lyase; PL3, par 95.1 0.98 3.4E-05 35.9 15.3 55 31-92 52-107 (196)
70 1dbg_A Chondroitinase B; beta 94.5 0.073 2.5E-06 49.0 7.0 59 8-69 94-169 (506)
71 3uw0_A Pectinesterase; right-h 94.3 1.1 3.7E-05 39.5 13.8 35 58-93 166-200 (364)
72 2nsp_A Pectinesterase A; micha 94.3 0.45 1.5E-05 41.5 11.2 114 25-153 91-230 (342)
73 2nsp_A Pectinesterase A; micha 94.1 0.73 2.5E-05 40.2 12.3 136 5-153 93-275 (342)
74 3uw0_A Pectinesterase; right-h 92.8 1.5 5E-05 38.6 12.1 13 80-92 165-177 (364)
75 1ee6_A Pectate lyase; parallel 89.8 6 0.0002 31.4 11.4 53 31-90 48-101 (197)
76 2vfm_A Bifunctional tail prote 88.9 4.8 0.00016 35.1 11.1 81 57-153 269-373 (559)
77 2v5i_A Salmonella typhimurium 88.5 4.7 0.00016 35.2 10.7 81 57-153 272-376 (559)
78 3t9g_A Pectate lyase; PL3, par 87.8 8.8 0.0003 30.4 15.6 107 8-124 52-158 (196)
79 3grh_A YBHC, acyl-COA thioeste 87.0 16 0.00055 32.6 13.7 82 6-91 199-296 (422)
80 1dbg_A Chondroitinase B; beta 86.6 4.6 0.00016 37.1 10.3 140 7-153 227-391 (506)
81 2xc1_A Bifunctional tail prote 86.6 7.1 0.00024 35.4 11.0 81 57-153 376-480 (666)
82 3grh_A YBHC, acyl-COA thioeste 86.4 9.4 0.00032 34.1 11.9 114 28-153 198-331 (422)
83 1ee6_A Pectate lyase; parallel 86.3 11 0.00038 29.9 12.5 110 8-127 48-157 (197)
84 3riq_A Tailspike protein; righ 76.7 7.5 0.00026 34.5 7.3 59 57-118 262-342 (543)
85 2x3h_A K5 lyase, K5A lyase; ba 66.7 32 0.0011 29.5 8.7 13 142-154 167-179 (542)
86 3riq_A Tailspike protein; righ 57.3 68 0.0023 28.6 9.3 110 28-152 260-411 (543)
87 2vfm_A Bifunctional tail prote 53.2 41 0.0014 29.4 7.2 70 80-152 269-355 (559)
88 2v5i_A Salmonella typhimurium 49.0 42 0.0014 29.3 6.6 70 80-152 272-358 (559)
89 2xc1_A Bifunctional tail prote 45.4 62 0.0021 29.4 7.3 70 80-152 376-462 (666)
90 3b4n_A Endo-pectate lyase; pec 41.0 1.7E+02 0.0059 25.1 13.3 53 31-91 158-212 (344)
91 2jrw_A Cyclic extended PEP.1; 21.6 29 0.001 17.4 0.7 9 239-247 16-24 (26)
No 1
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=7.1e-48 Score=344.74 Aligned_cols=225 Identities=26% Similarity=0.436 Sum_probs=200.9
Q ss_pred CeEEEEEccEEEEeeEEeCCCCcEEEEeceecEEEEeEEEEcCC-C---CCCCCeeeecCcccEEEEeeEEccCCceEEe
Q 040962 1 SMVFNFVTNSRISGITSVNSKNAHISLYGCHKVSIDNIKITAPY-Q---SPNTDGIKIGDSKGIKITHSSIGTGDDCIAL 76 (247)
Q Consensus 1 ~i~~~~~~nv~i~giti~n~~~~~i~~~~~~nv~i~n~~I~~~~-~---~~n~DGidi~~s~nV~I~n~~i~~~DD~i~i 76 (247)
.|+|.+|+|++|+||+++|+|+|++++. |+||+|+|++|.++. + ++|+||||+.+|+||+|+||+|.++||||++
T Consensus 128 ~i~~~~~~nv~i~~iti~nsp~~~i~i~-~~nv~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIai 206 (362)
T 1czf_A 128 FFYAHGLDSSSITGLNIKNTPLMAFSVQ-ANDITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQDDCLAV 206 (362)
T ss_dssp CEEEEEEETEEEESCEEECCSSCCEEEE-CSSEEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEECSSCSEEE
T ss_pred EEEEeecccEEEEEEEEecCCccEEEEe-eCCEEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEecCCCEEEE
Confidence 3789999999999999999999999999 999999999999964 3 7899999999999999999999999999999
Q ss_pred cCCcEeEEEEeeEEcCCCeEEEEeccccCCCCcEEEEEEEeeEEeCCceeEEEEEecCCCCceEEcEEEEeEEEeCCC-c
Q 040962 77 LSGSTNINVTDVTCGPGHGISVGSLGRYANERNVHGLAVRNCTFRGTTNGVRIKTWASPQANVASGFTFENIFMSNVE-N 155 (247)
Q Consensus 77 ~s~~~nV~I~nc~~~~~~gi~igs~g~~~~~~~i~nI~v~ni~~~~~~~gi~ik~~~~~~~g~i~nI~f~ni~~~~~~-~ 155 (247)
|+ .+||+|+||+|..+|||+|||+|.+ +.+.++||+|+||+|.++.+|++||+|++ ++|.|+||+|+||+|+++. +
T Consensus 207 ks-g~nI~i~n~~~~~ghGisiGS~G~~-~~~~v~nV~v~n~~~~~t~~GirIKt~~g-~~G~v~nI~~~ni~~~~v~~~ 283 (362)
T 1czf_A 207 NS-GENIWFTGGTCIGGHGLSIGSVGDR-SNNVVKNVTIEHSTVSNSENAVRIKTISG-ATGSVSEITYSNIVMSGISDY 283 (362)
T ss_dssp SS-EEEEEEESCEEESSCCEEEEEECSS-SCCEEEEEEEEEEEEEEEEEEEEEEEETT-CCEEEEEEEEEEEEEEEEEEE
T ss_pred eC-CeEEEEEEEEEeCCceeEEeecccc-CCCCEEEEEEEeeEEECCceEEEEEEeCC-CCceEeeEEEEeEEEECcccc
Confidence 99 5999999999999999999999865 45789999999999999999999999987 5799999999999999986 7
Q ss_pred cEEEEeeeCCCCCCCCCccCceEEEeEEEEeEEEEccC-CceEEEEecCCCCEEcEEEEeEEEEecCCCCccCeeeeccc
Q 040962 156 PIVIDQMYCPHGSCNQKITSNVQIKDVTYRNIWGTSST-KVAVNFQCSKTFPCENIVLQDIYLVHNGRDGAATSSCNFVD 234 (247)
Q Consensus 156 ~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~-~~~~~i~g~~~~~~~ni~~~nv~i~~~~~~~~~~~~c~~~~ 234 (247)
||.|++.|+....+ ..+.+.++|+||+|+||+++... ..++.|.|. +.+|+||+|+||+++.. .....|++++
T Consensus 284 ~i~I~~~Y~~~~~~-~~p~~~~~i~nI~~~ni~gt~~~~~~~i~i~c~-~~~c~ni~~~nv~i~~~----~~~~~C~n~~ 357 (362)
T 1czf_A 284 GVVIQQDYEDGKPT-GKPTNGVTIQDVKLESVTGSVDSGATEIYLLCG-SGSCSDWTWDDVKVTGG----KKSTACKNFP 357 (362)
T ss_dssp EEEEEEEEETTEEC-SCCCSSEEEEEEEEEEEEEEECTTSEEEEEECC-TTTEEEEEEEEEEEESS----BCCSCCBSCC
T ss_pred cEEEEEecCCCCCC-CCCCCCceEEEEEEEEEEEEecCCceEEEEEeC-CCcCcCEEEEeEEEEcC----CCcccCcCCC
Confidence 99999999863211 11224579999999999999875 578999997 78999999999999852 3457899987
Q ss_pred c
Q 040962 235 G 235 (247)
Q Consensus 235 ~ 235 (247)
.
T Consensus 358 ~ 358 (362)
T 1czf_A 358 S 358 (362)
T ss_dssp T
T ss_pred C
Confidence 4
No 2
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=2.1e-47 Score=339.09 Aligned_cols=225 Identities=29% Similarity=0.466 Sum_probs=201.2
Q ss_pred CeEEEEEccEEEEeeEEeCCCCcEEEEeceecEEEEeEEEEcCCC----CCCCCeeeecCcccEEEEeeEEccCCceEEe
Q 040962 1 SMVFNFVTNSRISGITSVNSKNAHISLYGCHKVSIDNIKITAPYQ----SPNTDGIKIGDSKGIKITHSSIGTGDDCIAL 76 (247)
Q Consensus 1 ~i~~~~~~nv~i~giti~n~~~~~i~~~~~~nv~i~n~~I~~~~~----~~n~DGidi~~s~nV~I~n~~i~~~DD~i~i 76 (247)
.|+|.+|+|++|+||+|+|+|+|++++. |++|+|+|++|.++.+ ++|+||||+.+|+||+|+||+|.++||||++
T Consensus 102 ~i~~~~~~nv~i~~i~i~nsp~~~i~i~-~~nv~i~~~~I~~~~~d~~~~~ntDGidi~~s~nV~I~n~~i~~gDDciai 180 (336)
T 1nhc_A 102 FMYIHDVEDSTFKGINIKNTPVQAISVQ-ATNVHLNDFTIDNSDGDDNGGHNTDGFDISESTGVYISGATVKNQDDCIAI 180 (336)
T ss_dssp CEEEEEEEEEEEESCEEECCSSCCEEEE-EEEEEEESCEEECTTHHHHTCCSCCSEEECSCEEEEEESCEEESSSEEEEE
T ss_pred EEEEeeeCcEEEEEEEEEeCCccEEEEE-eCCEEEEEEEEECCCcccccCCCCCcEEecCCCeEEEEeCEEEcCCCEEEE
Confidence 3789999999999999999999999999 9999999999999853 7999999999999999999999999999999
Q ss_pred cCCcEeEEEEeeEEcCCCeEEEEeccccCCCCcEEEEEEEeeEEeCCceeEEEEEecCCCCceEEcEEEEeEEEeCCCc-
Q 040962 77 LSGSTNINVTDVTCGPGHGISVGSLGRYANERNVHGLAVRNCTFRGTTNGVRIKTWASPQANVASGFTFENIFMSNVEN- 155 (247)
Q Consensus 77 ~s~~~nV~I~nc~~~~~~gi~igs~g~~~~~~~i~nI~v~ni~~~~~~~gi~ik~~~~~~~g~i~nI~f~ni~~~~~~~- 155 (247)
|+ .+||+|+||+|..+|||+|||+|++ +.+.++||+|+|++|.++.+|++||+|.+ ++|.|+||+|+||+|+++..
T Consensus 181 ks-g~nI~i~n~~~~~ghGisiGS~g~~-~~~~v~nV~v~n~~~~~t~~girIkt~~g-~~G~v~nI~~~ni~~~~v~~~ 257 (336)
T 1nhc_A 181 NS-GESISFTGGTCSGGHGLSIGSVGGR-DDNTVKNVTISDSTVSNSANGVRIKTIYK-ETGDVSEITYSNIQLSGITDY 257 (336)
T ss_dssp SS-EEEEEEESCEEESSSEEEEEEESSS-SCCEEEEEEEEEEEEESCSEEEEEEEETT-CCCEEEEEEEEEEEEEEESSE
T ss_pred eC-CeEEEEEeEEEECCcCceEccCccc-cCCCEEEEEEEeeEEECCCcEEEEEEECC-CCCEEeeeEEeeEEeeccccc
Confidence 99 5999999999999999999998766 55789999999999999999999999987 57999999999999999976
Q ss_pred cEEEEeeeCCCCCCCCCccCceEEEeEEEEeEEEEccC-CceEEEEecCCCCEEcEEEEeEEEEecCCCCccCeeeeccc
Q 040962 156 PIVIDQMYCPHGSCNQKITSNVQIKDVTYRNIWGTSST-KVAVNFQCSKTFPCENIVLQDIYLVHNGRDGAATSSCNFVD 234 (247)
Q Consensus 156 ~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~-~~~~~i~g~~~~~~~ni~~~nv~i~~~~~~~~~~~~c~~~~ 234 (247)
||.|++.|+....+ ..+.+.++|+||+|+||+++... ..++.|.| ++.+|+||+|+||+++.. ...+.|++++
T Consensus 258 ~i~i~~~y~~~~~~-~~p~~~~~i~~i~~~ni~gt~~~~~~~v~i~c-~~~~c~ni~~~nv~i~~~----~~~~~C~n~~ 331 (336)
T 1nhc_A 258 GIVIEQDYENGSPT-GTPSTGIPITDVTVDGVTGTLEDDATQVYILC-GDGSCSDWTWSGVDLSGG----KTSDKCENVP 331 (336)
T ss_dssp EEEEEEEEETTEEC-SCCCSSSCEEEEEEEEEEEEECTTCEEEEEEC-CTTCEEEEEEEEEEEESS----BCCSCCBSCC
T ss_pred cEEEEeecCCCCCC-CCCCCCceEEEEEEEeEEEEeCCCCEEEEEEc-CCCcEecEEEEeEEEEcC----CCCcccCCCC
Confidence 99999999863211 11223578999999999999875 57899999 588999999999999853 3457899987
Q ss_pred c
Q 040962 235 G 235 (247)
Q Consensus 235 ~ 235 (247)
+
T Consensus 332 ~ 332 (336)
T 1nhc_A 332 S 332 (336)
T ss_dssp T
T ss_pred C
Confidence 5
No 3
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=100.00 E-value=3.1e-47 Score=338.25 Aligned_cols=224 Identities=29% Similarity=0.454 Sum_probs=200.3
Q ss_pred CeEEEEEccEEEEeeEEeCCCCcEEEEeceecEEEEeEEEEcCC-C---CCCCCeeeecCcccEEEEeeEEccCCceEEe
Q 040962 1 SMVFNFVTNSRISGITSVNSKNAHISLYGCHKVSIDNIKITAPY-Q---SPNTDGIKIGDSKGIKITHSSIGTGDDCIAL 76 (247)
Q Consensus 1 ~i~~~~~~nv~i~giti~n~~~~~i~~~~~~nv~i~n~~I~~~~-~---~~n~DGidi~~s~nV~I~n~~i~~~DD~i~i 76 (247)
.|+|.+|+|++|+||+|+|+|+|++++..|++|+|+|++|.++. + ++|+||||+.+|+||+|+||+|.++||||++
T Consensus 106 ~i~~~~~~nv~i~~i~i~nsp~~~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDcIai 185 (339)
T 1ia5_A 106 FFAAHSLTNSVISGLKIVNSPVQVFSVAGSDYLTLKDITIDNSDGDDNGGHNTDAFDIGTSTYVTISGATVYNQDDCVAV 185 (339)
T ss_dssp CEEEEEEEEEEEESCEEECCSSCCEEEESCEEEEEESCEEECGGGTTTTCCSCCSEEEESCEEEEEESCEEECSSCSEEE
T ss_pred EEEEeecCcEEEEEEEEEcCCcceEEEecccCeEEeeEEEECCccccccCCCCCcEEecCCceEEEEeeEEEcCCCeEEE
Confidence 47899999999999999999999999999999999999999974 3 6899999999999999999999999999999
Q ss_pred cCCcEeEEEEeeEEcCCCeEEEEeccccCCCCcEEEEEEEeeEEeCCceeEEEEEecCCCCceEEcEEEEeEEEeCCCc-
Q 040962 77 LSGSTNINVTDVTCGPGHGISVGSLGRYANERNVHGLAVRNCTFRGTTNGVRIKTWASPQANVASGFTFENIFMSNVEN- 155 (247)
Q Consensus 77 ~s~~~nV~I~nc~~~~~~gi~igs~g~~~~~~~i~nI~v~ni~~~~~~~gi~ik~~~~~~~g~i~nI~f~ni~~~~~~~- 155 (247)
|+ .+||+|+||+|..+|||+|||+|++ +.+.++||+|+||+|.++.+|++||+|.+ ++|.|+||+|+||+|+++..
T Consensus 186 ks-g~nI~i~n~~~~~ghGisiGS~g~~-~~~~v~nV~v~n~~~~~t~~girIKt~~g-~~G~v~nI~~~ni~~~~v~~~ 262 (339)
T 1ia5_A 186 NS-GENIYFSGGYCSGGHGLSIGSVGGR-SDNTVKNVTFVDSTIINSDNGVRIKTNID-TTGSVSDVTYKDITLTSIAKY 262 (339)
T ss_dssp SS-EEEEEEESCEEESSSCEEEEEECSS-SCCEEEEEEEEEEEEESCSEEEEEEEETT-CCCEEEEEEEEEEEEEEESSE
T ss_pred eC-CeEEEEEeEEEECCceEEECcCCcc-cCCCEEEEEEEeeEEECCCcEEEEEEeCC-CCcEEEeeEEEEEEEECcccc
Confidence 99 5999999999999999999998765 55789999999999999999999999987 57999999999999999876
Q ss_pred cEEEEeeeCCCCCCCCCccCceEEEeEEEEeEEEEccC-CceEEEEecCCCCEEcEEEEeEEEEecCCCCccCeeeeccc
Q 040962 156 PIVIDQMYCPHGSCNQKITSNVQIKDVTYRNIWGTSST-KVAVNFQCSKTFPCENIVLQDIYLVHNGRDGAATSSCNFVD 234 (247)
Q Consensus 156 ~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~-~~~~~i~g~~~~~~~ni~~~nv~i~~~~~~~~~~~~c~~~~ 234 (247)
||.|++.|.. ... .+.+.++|+||+|+||+++... ..++.|.| ++.||+||+|+||+++.. ...+.|++++
T Consensus 263 ~i~i~~~y~~-~~~--~p~~~~~i~ni~~~ni~gt~~~~~~~v~i~c-~~~~c~ni~~~nv~i~~~----~~~~~C~n~~ 334 (339)
T 1ia5_A 263 GIVVQQNYGD-TSS--TPTTGVPITDFVLDNVHGSVVSSGTNILISC-GSGSCSDWTWTDVSVSGG----KTSSKCTNVP 334 (339)
T ss_dssp EEEEEEEETC-TTS--CCCSSSCEEEEEEEEEEEEECTTSEEEEEEC-CTTCEEEEEEEEEEEESS----BCCSCCBSCC
T ss_pred cEEEEccCCC-CCC--CCcCCceEEEEEEEeEEEEeCCCCEEEEEEe-CCCCEecEEEEeEEEECC----CCCeeeECCC
Confidence 9999999943 221 1223578999999999999875 57899999 488999999999999843 3457899987
Q ss_pred c
Q 040962 235 G 235 (247)
Q Consensus 235 ~ 235 (247)
.
T Consensus 335 ~ 335 (339)
T 1ia5_A 335 S 335 (339)
T ss_dssp T
T ss_pred C
Confidence 4
No 4
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=100.00 E-value=2.3e-47 Score=339.14 Aligned_cols=226 Identities=27% Similarity=0.458 Sum_probs=201.6
Q ss_pred CeEEEEEccEEEEeeEEeCCCCcEEEEeceecEEEEeEEEEcCCC----CCCCCeeeecCcccEEEEeeEEccCCceEEe
Q 040962 1 SMVFNFVTNSRISGITSVNSKNAHISLYGCHKVSIDNIKITAPYQ----SPNTDGIKIGDSKGIKITHSSIGTGDDCIAL 76 (247)
Q Consensus 1 ~i~~~~~~nv~i~giti~n~~~~~i~~~~~~nv~i~n~~I~~~~~----~~n~DGidi~~s~nV~I~n~~i~~~DD~i~i 76 (247)
.|+|.+|+|++|+||+|+|+|+|++++..|++|+|+|++|.++.+ ++|+||||+.+|+||+|+||+|.++||||++
T Consensus 102 ~i~~~~~~nv~i~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDciai 181 (339)
T 2iq7_A 102 FFYAHSLKSSNIKGLNVLNTPVQAFSINSATTLGVYDVIIDNSAGDSAGGHNTDAFDVGSSTGVYISGANVKNQDDCLAI 181 (339)
T ss_dssp CEEEEEEEEEEEECCEEECCSSCCEEEESCEEEEEESCEEECGGGGGTTCCSCCSEEEESCEEEEEESCEEECSSCSEEE
T ss_pred EEEEeeeCcEEEEEEEEEeCCcceEEEeccCCEEEEEEEEECCccccccCCCCCcEEEcCcceEEEEecEEecCCCEEEE
Confidence 478999999999999999999999999999999999999999743 7899999999999999999999999999999
Q ss_pred cCCcEeEEEEeeEEcCCCeEEEEeccccCCCCcEEEEEEEeeEEeCCceeEEEEEecCCCCceEEcEEEEeEEEeCCCc-
Q 040962 77 LSGSTNINVTDVTCGPGHGISVGSLGRYANERNVHGLAVRNCTFRGTTNGVRIKTWASPQANVASGFTFENIFMSNVEN- 155 (247)
Q Consensus 77 ~s~~~nV~I~nc~~~~~~gi~igs~g~~~~~~~i~nI~v~ni~~~~~~~gi~ik~~~~~~~g~i~nI~f~ni~~~~~~~- 155 (247)
|+ .+||+|+||+|..+|||+|||+|++ +.+.++||+|+||+|.++.+|++||+|.+ ++|.|+||+|+||+|+++..
T Consensus 182 ks-g~nI~i~n~~~~~ghGisiGSlg~~-~~~~v~nV~v~n~~~~~~~~girIkt~~g-~~G~v~nI~~~ni~~~~v~~~ 258 (339)
T 2iq7_A 182 NS-GTNITFTGGTCSGGHGLSIGSVGGR-SDNTVKTVTISNSKIVNSDNGVRIKTVSG-ATGSVSGVTYSGITLSNIAKY 258 (339)
T ss_dssp SS-EEEEEEESCEEESSCCEEEEEESSS-SCCEEEEEEEEEEEEESCSEEEEEEEETT-CCCEEEEEEEEEEEEEEESSE
T ss_pred cC-CccEEEEeEEEECCceEEECcCCcc-cCCCEEEEEEEeeEEECCCcEEEEEEeCC-CCeEEEEEEEEeEEccCcccc
Confidence 99 5999999999999999999998765 56789999999999999999999999987 57999999999999999876
Q ss_pred cEEEEeeeCCCCCCCCCccCceEEEeEEEEeEEEEccC-CceEEEEecCCCCEEcEEEEeEEEEecCCCCccCeeeeccc
Q 040962 156 PIVIDQMYCPHGSCNQKITSNVQIKDVTYRNIWGTSST-KVAVNFQCSKTFPCENIVLQDIYLVHNGRDGAATSSCNFVD 234 (247)
Q Consensus 156 ~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~-~~~~~i~g~~~~~~~ni~~~nv~i~~~~~~~~~~~~c~~~~ 234 (247)
||.|++.|+....+ ..+.+.++|+||+|+||+++... ..++.|.| ++.||+||+|+||+++.. .+.+.|++++
T Consensus 259 ~i~i~~~y~~~~~~-~~p~~~~~i~ni~~~ni~gt~~~~~~~~~i~c-~~~~c~ni~~~nv~i~~~----~~~~~C~n~~ 332 (339)
T 2iq7_A 259 GIVIEQDYENGSPT-GTPTNGVPITGLTLSKITGSVASSGTNVYILC-ASGACSNWKWSGVSVTGG----KKSTKCSNIP 332 (339)
T ss_dssp EEEEEEEEETTEEC-SCCCSSSCEEEEEEEEEEEEECTTSEEEEEEC-CTTCEEEEEEEEEEEESS----BCCSCCBCCC
T ss_pred cEEEEeecCCCCCC-CCCCCCceEEEEEEEeEEEEeCCCCEEEEEEe-CCCcEecEEEEeEEEEcC----CCcccccCCC
Confidence 99999999863211 11223578999999999999875 57899999 588999999999999843 3457899987
Q ss_pred c
Q 040962 235 G 235 (247)
Q Consensus 235 ~ 235 (247)
.
T Consensus 333 ~ 333 (339)
T 2iq7_A 333 S 333 (339)
T ss_dssp T
T ss_pred C
Confidence 4
No 5
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=100.00 E-value=2.3e-47 Score=343.78 Aligned_cols=217 Identities=29% Similarity=0.408 Sum_probs=199.0
Q ss_pred CeEEEEEccEEEEeeEEeCCCCcEEEEeceecEEEEeEEEEcCCCCCCCCeeeecCcccEEEEeeEEccCCceEEecC--
Q 040962 1 SMVFNFVTNSRISGITSVNSKNAHISLYGCHKVSIDNIKITAPYQSPNTDGIKIGDSKGIKITHSSIGTGDDCIALLS-- 78 (247)
Q Consensus 1 ~i~~~~~~nv~i~giti~n~~~~~i~~~~~~nv~i~n~~I~~~~~~~n~DGidi~~s~nV~I~n~~i~~~DD~i~i~s-- 78 (247)
.|.|.+|+|++|+||+|+|||+|++++..|++|+|+|++|.++.+++|+||||+.+|+||+|+||+|.++||||++|+
T Consensus 153 ~i~~~~~~nv~I~~iti~nsp~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks~~ 232 (376)
T 1bhe_A 153 LIQINKSKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKAYK 232 (376)
T ss_dssp SEEEESCEEEEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECSSCSEEEEECT
T ss_pred EEEEEcceEEEEEeEEEECCCcEEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecCCCeEEEcccC
Confidence 378999999999999999999999999999999999999999887899999999999999999999999999999996
Q ss_pred ---CcEeEEEEeeEEcCCCeEEEEeccccCCCCcEEEEEEEeeEEeCCceeEEEEEecCCCCceEEcEEEEeEEEeCCCc
Q 040962 79 ---GSTNINVTDVTCGPGHGISVGSLGRYANERNVHGLAVRNCTFRGTTNGVRIKTWASPQANVASGFTFENIFMSNVEN 155 (247)
Q Consensus 79 ---~~~nV~I~nc~~~~~~gi~igs~g~~~~~~~i~nI~v~ni~~~~~~~gi~ik~~~~~~~g~i~nI~f~ni~~~~~~~ 155 (247)
+++||+|+||+|..+|||+|||+. . .++||+|+||+|.++.+|++||+|.+ ++|.|+||+|+||+|+++.+
T Consensus 233 ~~~~s~nI~I~n~~~~~ghGisiGSe~----~-~v~nV~v~n~~~~~t~~GirIKt~~g-~~G~v~ni~f~ni~~~~v~~ 306 (376)
T 1bhe_A 233 GRAETRNISILHNDFGTGHGMSIGSET----M-GVYNVTVDDLKMNGTTNGLRIKSDKS-AAGVVNGVRYSNVVMKNVAK 306 (376)
T ss_dssp TSCCEEEEEEEEEEECSSSCEEEEEEE----S-SEEEEEEEEEEEESCSEEEEEECCTT-TCCEEEEEEEEEEEEESCSE
T ss_pred CCCCceEEEEEeeEEEccccEEeccCC----c-cEeeEEEEeeEEeCCCcEEEEEEecC-CCceEeeEEEEeEEEeCCCc
Confidence 699999999999999999999983 3 79999999999999999999999987 58999999999999999999
Q ss_pred cEEEEeeeCCCCCCCCCccCceEEEeEEEEeEEEEccCCceEEEEecCCCCEEcEEEEeEEEEecCCCCccCeeeecccc
Q 040962 156 PIVIDQMYCPHGSCNQKITSNVQIKDVTYRNIWGTSSTKVAVNFQCSKTFPCENIVLQDIYLVHNGRDGAATSSCNFVDG 235 (247)
Q Consensus 156 ~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~g~~~~~~~ni~~~nv~i~~~~~~~~~~~~c~~~~~ 235 (247)
||.|++.|+... ....+.|+||+|+||+++.. .++.|.|.++.||++|+|+||+++... .|.|+++..
T Consensus 307 ~i~i~~~y~~~~-----~~~~~~i~ni~~~ni~gt~~--~~~~l~g~~~~~~~~I~l~nv~l~~~~-----~~~~~~~~~ 374 (376)
T 1bhe_A 307 PIVIDTVYEKKE-----GSNVPDWSDITFKDVTSETK--GVVVLNGENAKKPIEVTMKNVKLTSDS-----TWQIKNVNV 374 (376)
T ss_dssp EEEEETTSSCCC-----CCCCCEEEEEEEEEEEECSC--CEEEEECTTCSSCEEEEEEEEECCTTC-----EEEEESEEE
T ss_pred eEEEEeeccCCC-----CCcCcEEEEEEEEEEEEEec--ceEEEEeCCCCCeeeEEEEeEEEecCC-----CceEEEEEe
Confidence 999999987642 12346899999999999975 478999999999999999999998653 499999853
No 6
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=100.00 E-value=1.5e-46 Score=335.01 Aligned_cols=225 Identities=25% Similarity=0.448 Sum_probs=200.3
Q ss_pred eEE-E-EEccEEEEeeEEeCCCCcEEEEeceecEEEEeEEEEcCC-C-----------CCCCCeeeecCcccEEEEeeEE
Q 040962 2 MVF-N-FVTNSRISGITSVNSKNAHISLYGCHKVSIDNIKITAPY-Q-----------SPNTDGIKIGDSKGIKITHSSI 67 (247)
Q Consensus 2 i~~-~-~~~nv~i~giti~n~~~~~i~~~~~~nv~i~n~~I~~~~-~-----------~~n~DGidi~~s~nV~I~n~~i 67 (247)
|+| . .|++++|+||+|+|+|+|++++..|++|+|+|++|.++. + ++|+||||+.+|+||+|+||+|
T Consensus 105 i~~~~~~~~nv~I~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i 184 (349)
T 1hg8_A 105 FIVVQKTTGNSKITNLNIQNWPVHCFDITGSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHV 184 (349)
T ss_dssp EEEEEEEESSEEEESCEEECCSSEEEEEESCEEEEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEE
T ss_pred EEEeecCcCcEEEEEEEEEcCCCceEEEeccCCEEEEEEEEECCCCccccccccccccCCCCCeEEEccccEEEEEeeEE
Confidence 567 6 798999999999999999999999999999999999963 2 4899999999999999999999
Q ss_pred ccCCceEEecCCcEeEEEEeeEEcCCCeEEEEeccccCCCCcEEEEEEEeeEEeCCceeEEEEEecCCCCceEEcEEEEe
Q 040962 68 GTGDDCIALLSGSTNINVTDVTCGPGHGISVGSLGRYANERNVHGLAVRNCTFRGTTNGVRIKTWASPQANVASGFTFEN 147 (247)
Q Consensus 68 ~~~DD~i~i~s~~~nV~I~nc~~~~~~gi~igs~g~~~~~~~i~nI~v~ni~~~~~~~gi~ik~~~~~~~g~i~nI~f~n 147 (247)
.++||||++|+ .+||+|+||+|..+|||+|||+|++ +.+.++||+|+|++|.++.+|++||++.+ ++|.|+||+|+|
T Consensus 185 ~~gDDcIaiks-g~nI~i~n~~~~~ghGisiGS~G~~-~~~~v~nV~v~n~~~~~~~~GirIKt~~g-~~G~v~nI~~~n 261 (349)
T 1hg8_A 185 YNQDDCVAVTS-GTNIVVSNMYCSGGHGLSIGSVGGK-SDNVVDGVQFLSSQVVNSQNGCRIKSNSG-ATGTINNVTYQN 261 (349)
T ss_dssp ECSSCSEEESS-EEEEEEEEEEEESSCCEEEEEESSS-SCCEEEEEEEEEEEEEEEEEEEEEEEETT-CCEEEEEEEEEE
T ss_pred ecCCCeEEeeC-CeEEEEEeEEEeCCcceEEcccccc-ccCCEEEEEEEEEEEECCCcEEEEEecCC-CCccccceEEEE
Confidence 99999999999 6999999999999999999999876 56789999999999999999999999987 579999999999
Q ss_pred EEEeCCC-ccEEEEeeeCCCCCCCCCccCceEEEeEEEEeEEEEccC-CceEEEEecCCCCEEcEEEEeEEEEecCCCCc
Q 040962 148 IFMSNVE-NPIVIDQMYCPHGSCNQKITSNVQIKDVTYRNIWGTSST-KVAVNFQCSKTFPCENIVLQDIYLVHNGRDGA 225 (247)
Q Consensus 148 i~~~~~~-~~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~-~~~~~i~g~~~~~~~ni~~~nv~i~~~~~~~~ 225 (247)
|+|+++. +||.|++.|+....+ ..+...++|+||+|+||+++... ..++.|.|. +.||+||+|+||+++.. .
T Consensus 262 i~~~~v~~~~i~i~~~Y~~~~~~-~~p~~~~~i~~I~~~ni~gt~~~~~~~v~i~c~-~~~c~ni~~~nv~i~~~----~ 335 (349)
T 1hg8_A 262 IALTNISTYGVDVQQDYLNGGPT-GKPTNGVKISNIKFIKVTGTVASSAQDWFILCG-DGSCSGFTFSGNAITGG----G 335 (349)
T ss_dssp EEEEEEEEEEEEEEEEECSSSBC-SCCCSSEEEEEEEEEEEEEEECTTSEEEEEECC-SSCEEEEEEESCEEECC----S
T ss_pred EEEEccccccEEEEeeccCCCCC-CcccCCceEEEEEEEeEEEEeCCCCEEEEEEeC-CCcCcCEEEEeEEEEcC----C
Confidence 9999996 699999999873221 11234579999999999999875 578999998 68999999999999853 3
Q ss_pred cCeeeecccc
Q 040962 226 ATSSCNFVDG 235 (247)
Q Consensus 226 ~~~~c~~~~~ 235 (247)
+...|.++++
T Consensus 336 ~~~~C~n~~~ 345 (349)
T 1hg8_A 336 KTSSCNYPTN 345 (349)
T ss_dssp SCCEECSSSS
T ss_pred CCeeeeCCCC
Confidence 4578999976
No 7
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=100.00 E-value=8.8e-46 Score=337.44 Aligned_cols=224 Identities=22% Similarity=0.365 Sum_probs=202.7
Q ss_pred eEEEEEccEEEEeeEEeCCCCcEEEEeceecEEEEeEEEEcCCCCCCCCeeeecCcccEEEEeeEEccCCceEEecCCcE
Q 040962 2 MVFNFVTNSRISGITSVNSKNAHISLYGCHKVSIDNIKITAPYQSPNTDGIKIGDSKGIKITHSSIGTGDDCIALLSGST 81 (247)
Q Consensus 2 i~~~~~~nv~i~giti~n~~~~~i~~~~~~nv~i~n~~I~~~~~~~n~DGidi~~s~nV~I~n~~i~~~DD~i~i~s~~~ 81 (247)
|+|.+|+|++|+||+|+|+|+|++++.+|+||+|+|++|.++ +.+|+||||+.+ +||+|+||+|.++||||++|++++
T Consensus 130 i~~~~~~nv~I~~iti~nsp~~~i~i~~~~nv~I~n~~I~~~-d~~ntDGidi~~-~nV~I~n~~i~~gDD~Iai~s~~~ 207 (422)
T 1rmg_A 130 LRLTDVTHFSVHDIILVDAPAFHFTMDTCSDGEVYNMAIRGG-NEGGLDGIDVWG-SNIWVHDVEVTNKDECVTVKSPAN 207 (422)
T ss_dssp EEEEEEEEEEEEEEEEECCSSCSEEEEEEEEEEEEEEEEECC-SSTTCCSEEEEE-EEEEEEEEEEESSSEEEEEEEEEE
T ss_pred EEEcccceEEEECeEEECCCceEEEEeCcCCEEEEeEEEECC-CCCCCccEeecC-CeEEEEeeEEeCCCCeEEeCCCCc
Confidence 789999999999999999999999999999999999999994 468999999999 999999999999999999999999
Q ss_pred eEEEEeeEEcCCCeEEEEeccccCCCCcEEEEEEEeeEEeCCceeEEEEEecCCCCceEEcEEEEeEEEeCCCccEEEEe
Q 040962 82 NINVTDVTCGPGHGISVGSLGRYANERNVHGLAVRNCTFRGTTNGVRIKTWASPQANVASGFTFENIFMSNVENPIVIDQ 161 (247)
Q Consensus 82 nV~I~nc~~~~~~gi~igs~g~~~~~~~i~nI~v~ni~~~~~~~gi~ik~~~~~~~g~i~nI~f~ni~~~~~~~~i~i~~ 161 (247)
||+|+||+|..+|||+|||+|+ .+.++||+|+||+|.++.+|++||++.+ .|.++||+|+||+|+++.+|+.|++
T Consensus 208 nI~I~n~~~~~~~GisIGS~g~---~~~v~nV~v~n~~~~~~~~Gi~Ikt~~g--~G~v~nI~~~NI~~~~v~~~i~i~~ 282 (422)
T 1rmg_A 208 NILVESIYCNWSGGCAMGSLGA---DTDVTDIVYRNVYTWSSNQMYMIKSNGG--SGTVSNVLLENFIGHGNAYSLDIDG 282 (422)
T ss_dssp EEEEEEEEEESSSEEEEEEECT---TEEEEEEEEEEEEEESSSCSEEEEEBBC--CEEEEEEEEEEEEEEEESCSEEEET
T ss_pred CEEEEeEEEcCCcceeecccCC---CCcEEEEEEEeEEEeccceEEEEEecCC--CcEEEEEEEEeEEEECccccEEEEe
Confidence 9999999999999999999864 3579999999999999999999999765 5899999999999999999999999
Q ss_pred eeCCCCCCCCCccCceEEEeEEEEeEEEEccC---CceEEEEecCCCCEEcEEEEeEEEEecCCCCccCeeeeccccc
Q 040962 162 MYCPHGSCNQKITSNVQIKDVTYRNIWGTSST---KVAVNFQCSKTFPCENIVLQDIYLVHNGRDGAATSSCNFVDGD 236 (247)
Q Consensus 162 ~y~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~---~~~~~i~g~~~~~~~ni~~~nv~i~~~~~~~~~~~~c~~~~~~ 236 (247)
.|+.... .......|+||+|+||+++... ..++.|.|.++.+|+||+|+||+++..++. ...+.|+++.|.
T Consensus 283 ~y~~~~~---~~~~~~~i~nI~~~nI~gt~~~g~~~~~i~i~~~~~~~~~ni~l~nv~i~~~~g~-~~~~~C~n~~g~ 356 (422)
T 1rmg_A 283 YWSSMTA---VAGDGVQLNNITVKNWKGTEANGATRPPIRVVCSDTAPCTDLTLEDIAIWTESGS-SELYLCRSAYGS 356 (422)
T ss_dssp BCTTSCC---BSSSCCEEEEEEEEEEEEEESCTTTSCSEEEECBTTBCEEEEEEEEEEEEESSSS-CEEEEEESEEEE
T ss_pred eccCCCc---ccCCCceEEEEEEEeEEEEecccccceeEEEEeCCCCcEeeEEEEeEEEEcCCCC-ccceEEECCCcc
Confidence 9875322 1234679999999999998752 458999999999999999999999988764 566999999875
No 8
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=100.00 E-value=7.7e-47 Score=334.84 Aligned_cols=209 Identities=22% Similarity=0.349 Sum_probs=187.9
Q ss_pred eEEEEEccEEEEeeEEeCCCCcEEEEeceec-EEEEeEEEEcCC-C----CCCCCeeeecCcccEEEEeeEEccCCceEE
Q 040962 2 MVFNFVTNSRISGITSVNSKNAHISLYGCHK-VSIDNIKITAPY-Q----SPNTDGIKIGDSKGIKITHSSIGTGDDCIA 75 (247)
Q Consensus 2 i~~~~~~nv~i~giti~n~~~~~i~~~~~~n-v~i~n~~I~~~~-~----~~n~DGidi~~s~nV~I~n~~i~~~DD~i~ 75 (247)
|+|.+|+ ++|+||+++|||+|++++.+|+| |+|+|++|.++. + ++|+||||+ +|+||+|+||+|.++||||+
T Consensus 100 i~~~~~~-v~i~giti~nsp~~~i~i~~~~n~v~i~~v~I~~~~~d~~~~~~NtDGidi-~s~nV~I~n~~i~~gDDcIa 177 (335)
T 1k5c_A 100 FLKIKGS-GTYKKFEVLNSPAQAISVGPTDAHLTLDGITVDDFAGDTKNLGHNTDGFDV-SANNVTIQNCIVKNQDDCIA 177 (335)
T ss_dssp SEEEEEE-EEEESCEEESCSSCCEEEEEEEEEEEEESCEEECGGGGGGGCCCSCCSEEE-ECSSEEEESCEEESSSCSEE
T ss_pred EEEeceE-EEEEEEEEECCCcceEEEEccCCeEEEEEEEEECCCCcccccCCCCCeEcc-cCCeEEEEeeEEEcCCCEEE
Confidence 7899999 99999999999999999999999 999999999974 3 799999999 99999999999999999999
Q ss_pred ecCCcEeEEEEeeEEcCCCeEEEEeccccCCCCcEEEEEEEeeEEeCCceeEEEEEecCCCC-ceEEcEEEEeEEEeCCC
Q 040962 76 LLSGSTNINVTDVTCGPGHGISVGSLGRYANERNVHGLAVRNCTFRGTTNGVRIKTWASPQA-NVASGFTFENIFMSNVE 154 (247)
Q Consensus 76 i~s~~~nV~I~nc~~~~~~gi~igs~g~~~~~~~i~nI~v~ni~~~~~~~gi~ik~~~~~~~-g~i~nI~f~ni~~~~~~ 154 (247)
+|++ +||+|+||+|..+|||+|||+|+ .+.++||+|+||+|.++.+|++||++.+ ++ |.|+||+|+||+|+++.
T Consensus 178 iksg-~nI~i~n~~~~~ghGisIGS~g~---~~~v~nV~v~n~~~~~t~~girIKt~~g-~~~G~v~nI~f~ni~~~~v~ 252 (335)
T 1k5c_A 178 INDG-NNIRFENNQCSGGHGISIGSIAT---GKHVSNVVIKGNTVTRSMYGVRIKAQRT-ATSASVSGVTYDANTISGIA 252 (335)
T ss_dssp EEEE-EEEEEESCEEESSCCEEEEEECT---TCEEEEEEEESCEEEEEEEEEEEEEETT-CCSCEEEEEEEESCEEEEEE
T ss_pred eeCC-eeEEEEEEEEECCccCeEeeccC---CCCEEEEEEEeeEEECCCceEEEEEeCC-CCcceEeeeEEEEEEEEccc
Confidence 9995 99999999999999999999953 5789999999999999999999999987 46 99999999999999997
Q ss_pred -ccEEEEeeeCCCCCCCCCccCceEEEeEEEEeEE--EEccC-CceEEEEecCCCCEEcEEEEeEEEEecCC
Q 040962 155 -NPIVIDQMYCPHGSCNQKITSNVQIKDVTYRNIW--GTSST-KVAVNFQCSKTFPCENIVLQDIYLVHNGR 222 (247)
Q Consensus 155 -~~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~--~~~~~-~~~~~i~g~~~~~~~ni~~~nv~i~~~~~ 222 (247)
+||.|++.|.. ... .+.+.++|+||+|+||+ ++... ..++.|.|.+ ||+||+|+||+++..+.
T Consensus 253 ~~~i~i~~~Y~~-~~~--~p~~~~~i~nI~~~nI~~~Gt~~~~~~~i~i~c~~--~c~ni~~~nv~i~~~~~ 319 (335)
T 1k5c_A 253 KYGVLISQSYPD-DVG--NPGTGAPFSDVNFTGGATTIKVNNAATRVTVECGN--CSGNWNWSQLTVTGGKA 319 (335)
T ss_dssp EEEEEEEEEETS-SSS--SCCSSSCEEEEEECSSCEEEEECTTCEEEEEECSS--EESEEEEEEEEEESSBC
T ss_pred cccEEEEeeCCC-CCC--CCCCCceEEEEEEEEEEEeeEEcCCceEEEEECCC--cCCCEEEEeEEEEcCCC
Confidence 69999999943 211 12235799999999999 76654 5789999976 99999999999987653
No 9
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=100.00 E-value=1.1e-45 Score=338.51 Aligned_cols=208 Identities=25% Similarity=0.295 Sum_probs=191.7
Q ss_pred CeEEEEEccEEEEeeEEeCCCCcEEEEeceecEEEEeEEEEcCCCCCCCCeeeecCcccEEEEeeEEccCCceEEecCC-
Q 040962 1 SMVFNFVTNSRISGITSVNSKNAHISLYGCHKVSIDNIKITAPYQSPNTDGIKIGDSKGIKITHSSIGTGDDCIALLSG- 79 (247)
Q Consensus 1 ~i~~~~~~nv~i~giti~n~~~~~i~~~~~~nv~i~n~~I~~~~~~~n~DGidi~~s~nV~I~n~~i~~~DD~i~i~s~- 79 (247)
.|.|.+|+|++|+||+++|||+|++++..|+||+|+|++|.++ ++|+||||+.+|+||+|+||+|.++||||++|++
T Consensus 192 ~i~~~~~~nv~i~giti~nsp~~~i~~~~~~nv~i~~v~I~~~--~~NtDGidi~~s~nV~I~n~~i~~gDDcIaiksg~ 269 (448)
T 3jur_A 192 FVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISST--GPNNDGIDPESCKYMLIEKCRFDTGDDSVVIKSGR 269 (448)
T ss_dssp SEEEESCEEEEEESCEEESCSSCSEEEESCEEEEEESCEEEEC--STTCCSBCCBSCEEEEEESCEEEESSEEEEEBCCC
T ss_pred EEEEEcccceEEEeeEEEeCCCceEeeeccCCEEEEeEEEeec--cCCCccccccCCcCEEEEeeEEEeCCCcEEeccCc
Confidence 4789999999999999999999999999999999999999997 6899999999999999999999999999999998
Q ss_pred ----------cEeEEEEeeEE--cCCC-eEEEEeccccCCCCcEEEEEEEeeEEeCCceeEEEEEecCCCCceEEcEEEE
Q 040962 80 ----------STNINVTDVTC--GPGH-GISVGSLGRYANERNVHGLAVRNCTFRGTTNGVRIKTWASPQANVASGFTFE 146 (247)
Q Consensus 80 ----------~~nV~I~nc~~--~~~~-gi~igs~g~~~~~~~i~nI~v~ni~~~~~~~gi~ik~~~~~~~g~i~nI~f~ 146 (247)
++||+|+||+| ..+| ||+|||+ +.+.++||+|+||+|.++.+|++||++.+ ++|.|+||+|+
T Consensus 270 ~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~----~~~~v~nV~v~n~~~~~t~~GirIKt~~g-~gG~v~nI~f~ 344 (448)
T 3jur_A 270 DADGRRIGVPSEYILVRDNLVISQASHGGLVIGSE----MSGGVRNVVARNNVYMNVERALRLKTNSR-RGGYMENIFFI 344 (448)
T ss_dssp HHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSS----CTTCEEEEEEESCEEESCSEEEEEECCTT-TCSEEEEEEEE
T ss_pred cccccccCCCceeEEEEEeEEecCCCcceEEECCc----ccCcEEEEEEEEEEEecccceEEEEEEcC-CCceEeeEEEE
Confidence 89999999999 5577 8999998 56789999999999999999999999986 57999999999
Q ss_pred eEEEeCCCccE-EEEeeeCCCCCCCCCccCceEEEeEEEEeEEEEccCCceEEEEecCCCCEEcEEEEeEEEEecC
Q 040962 147 NIFMSNVENPI-VIDQMYCPHGSCNQKITSNVQIKDVTYRNIWGTSSTKVAVNFQCSKTFPCENIVLQDIYLVHNG 221 (247)
Q Consensus 147 ni~~~~~~~~i-~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~g~~~~~~~ni~~~nv~i~~~~ 221 (247)
||+|+++.+|+ .|++.|+... ....+.|+||+|+||+++. ...++.|.|.++.||+||+|+||+++...
T Consensus 345 ni~m~~v~~~~i~I~~~Y~~~~-----~~~~~~i~nI~~~NI~~t~-~~~~i~i~g~~~~p~~~I~~~nv~i~~~~ 414 (448)
T 3jur_A 345 DNVAVNVSEEVIRINLRYDNEE-----GEYLPVVRSVFVKNLKATG-GKYAVRIEGLENDYVKDILISDTIIEGAK 414 (448)
T ss_dssp SCEEEEESSEEEEEESCGGGCC-----CSCCCEEEEEEEESCEEEE-CSEEEEEECBTTBCEEEEEEEEEEEESCS
T ss_pred EEEEECCccccEEEEeeccCCC-----CCCCceEEEEEEEeEEEEe-cceEEEEEeCCCCCEeeEEEEEEEEEccc
Confidence 99999999988 9999998641 1235699999999999988 47899999999999999999999998654
No 10
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=100.00 E-value=1.8e-41 Score=321.59 Aligned_cols=239 Identities=21% Similarity=0.243 Sum_probs=195.5
Q ss_pred CeEEEEEccEEEEeeEEeCCCCcEEEEeceecEEEEeEEEEcCCCCCCCCeeeecCcccEEEEeeEEccCCceEEecCC-
Q 040962 1 SMVFNFVTNSRISGITSVNSKNAHISLYGCHKVSIDNIKITAPYQSPNTDGIKIGDSKGIKITHSSIGTGDDCIALLSG- 79 (247)
Q Consensus 1 ~i~~~~~~nv~i~giti~n~~~~~i~~~~~~nv~i~n~~I~~~~~~~n~DGidi~~s~nV~I~n~~i~~~DD~i~i~s~- 79 (247)
.|.|.+|+|++|+||+|+|+|+|++++..|+||+|+|++|.. .+++|+||||+.+|+||+|+||+|.++||||++|++
T Consensus 333 ~i~~~~~~nv~I~giti~ns~~~~i~~~~~~nv~i~~v~i~~-~~~~NtDGidi~~s~nV~I~n~~i~~gDD~Iaiksg~ 411 (608)
T 2uvf_A 333 LMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGLIHQT-YDANNGDGIEFGNSQNVMVFNNFFDTGDDCINFAAGT 411 (608)
T ss_dssp SEEEESEEEEEEESCEEECCSSCSEEEESCEEEEEESCEEEC-TTCTTCCSEEEESCEEEEEESCEEECSSCSEEEECCC
T ss_pred EEEEEeeeeEEEeCcEEecCCCCEEEEecCCCEEEeeEEEcC-CCCCCCCeEEecCCceEEEEeeEEecCCceEEecCCc
Confidence 378999999999999999999999999999999999999866 447899999999999999999999999999999986
Q ss_pred ---------cEeEEEEeeEEcCCCe-EEEEeccccCCCCcEEEEEEEeeEEeCCceeEEEEEecCCCCceEEcEEEEeEE
Q 040962 80 ---------STNINVTDVTCGPGHG-ISVGSLGRYANERNVHGLAVRNCTFRGTTNGVRIKTWASPQANVASGFTFENIF 149 (247)
Q Consensus 80 ---------~~nV~I~nc~~~~~~g-i~igs~g~~~~~~~i~nI~v~ni~~~~~~~gi~ik~~~~~~~g~i~nI~f~ni~ 149 (247)
++||+|+||+|..+|| +.|||+ +.+.++||+|+||+|.++.+|++||++.+ ++|.|+||+|+||+
T Consensus 412 ~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~----~~~~v~nI~v~n~~~~~t~~GirIKt~~g-~gG~v~nI~~~ni~ 486 (608)
T 2uvf_A 412 GEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSH----TGAWIEDILAENNVMYLTDIGLRAKSTST-IGGGARNVTFRNNA 486 (608)
T ss_dssp SGGGGGSCCEEEEEEESCEECSSSCSEEEESC----CTTCEEEEEEESCEEESCSEEEEEEEETT-TCCEEEEEEEEEEE
T ss_pred CccccccccccCEEEEeEEEeCCCCeEEEccc----CCCCEEEEEEEeEEEECCCceEEEeeecC-CCceEECcEEEeeE
Confidence 7999999999999998 569997 67899999999999999999999999987 57999999999999
Q ss_pred EeCC-CccEEEEeeeCCCCCCC--CCccCceEEEeEEEEeEEEEccCC--ceEEEEec--CCCCEEcEEEEeEEEEecCC
Q 040962 150 MSNV-ENPIVIDQMYCPHGSCN--QKITSNVQIKDVTYRNIWGTSSTK--VAVNFQCS--KTFPCENIVLQDIYLVHNGR 222 (247)
Q Consensus 150 ~~~~-~~~i~i~~~y~~~~~~~--~~~~~~~~i~nI~~~ni~~~~~~~--~~~~i~g~--~~~~~~ni~~~nv~i~~~~~ 222 (247)
|+++ .+||.|++.|+....+. +.....+.+++|+|+||+++.... .++.+.+. ++.+|+||+|+||+++...+
T Consensus 487 m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n~~gt~~~i~i~g~~~~~~p~~ni~~~nv~i~~~~~ 566 (608)
T 2uvf_A 487 MRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGKNPSIEIKGDTANKAWHRLVHVNNVQLNNVTP 566 (608)
T ss_dssp EEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEEECSSSCSEEEECBGGGTBCEEEEEEEEEEEESCCC
T ss_pred EEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEeeeceEEeEEEEEEcCCCCccccEEEEeEEEEccCc
Confidence 9999 59999999998643210 001122457777777777665432 45566654 45688999999998876432
Q ss_pred -------------------CCccCeeeecccccCCCcccCCC
Q 040962 223 -------------------DGAATSSCNFVDGDSYGTQKPPS 245 (247)
Q Consensus 223 -------------------~~~~~~~c~~~~~~~~~~~~p~~ 245 (247)
.....|.|+++.+..+.-+.|.|
T Consensus 567 ~~i~~~~~~~~~nv~i~~~~~~~~~~~~~v~~~~~~~v~~~p 608 (608)
T 2uvf_A 567 TAISDLRDSEFNKVTFTELRGDTPWHFSEVKNVKVDGKPVAP 608 (608)
T ss_dssp CEEESEESCEEEEEEEESCSSSCSCCEESCBSCCBTTCCC--
T ss_pred eeEEeccCceEEeEEEeCCCCCccEEEEeeeceEEcceEeCC
Confidence 11245888888888875566665
No 11
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=100.00 E-value=2.1e-33 Score=262.60 Aligned_cols=197 Identities=13% Similarity=0.119 Sum_probs=161.8
Q ss_pred EEEccEEEEeeEEeCCCCcEEEEe-ce-ec--EEEEeEEEEcCCCCCCCCeeeecCcccEEEEeeEEccCCceEEecCCc
Q 040962 5 NFVTNSRISGITSVNSKNAHISLY-GC-HK--VSIDNIKITAPYQSPNTDGIKIGDSKGIKITHSSIGTGDDCIALLSGS 80 (247)
Q Consensus 5 ~~~~nv~i~giti~n~~~~~i~~~-~~-~n--v~i~n~~I~~~~~~~n~DGidi~~s~nV~I~n~~i~~~DD~i~i~s~~ 80 (247)
.+|+|++|+|++|+|||+|++++. .| ++ |+|+|+++.++. .+|+||||+. +||+|+||+|.++||||++|+
T Consensus 290 ~~c~nV~I~Giti~Nsp~w~i~i~~~~~~ni~V~I~n~~i~~~~-~~NTDGidi~--~nV~I~n~~i~~gDDcIaIks-- 364 (549)
T 1x0c_A 290 NSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAF-YGQTDGLEMY--PGTILQDVFYHTDDDGLKMYY-- 364 (549)
T ss_dssp SSCEEEEEESCEEECCSSCSEEEECSCGGGEEEEEEEEEEECCC-BTTCCCCBCC--TTCEEEEEEEEESSCCEECCS--
T ss_pred CCceEEEEECcEEECCCceeEEeeccCCCCCeEEEEeeEeEcCC-CCCCCccccc--CCEEEEeeEEeCCCCEEEECC--
Confidence 899999999999999999999966 56 69 999999999864 4799999998 999999999999999999998
Q ss_pred EeEEEEeeEEcC--CCe-EEEEeccccCCCCcEEEEEEEeeEEeCCce------eEEEEEe--c--C------CCCceEE
Q 040962 81 TNINVTDVTCGP--GHG-ISVGSLGRYANERNVHGLAVRNCTFRGTTN------GVRIKTW--A--S------PQANVAS 141 (247)
Q Consensus 81 ~nV~I~nc~~~~--~~g-i~igs~g~~~~~~~i~nI~v~ni~~~~~~~------gi~ik~~--~--~------~~~g~i~ 141 (247)
+||+|+||+|+. +++ |++||. .+.++||+|+||+|.++.. +..|++. . + ..+|.|+
T Consensus 365 ~NI~I~n~~~~~~~g~~~IsiGs~-----~~~V~NV~v~n~~i~~s~~~k~~~~g~iI~~~~~~~~g~~~~~~d~~G~i~ 439 (549)
T 1x0c_A 365 SNVTARNIVMWKESVAPVVEFGWT-----PRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYAPDGLSSNHSTGNS 439 (549)
T ss_dssp SSEEEEEEEEEECSSSCSEECCBS-----CCCEEEEEEEEEEEEECCCCSGGGCCCSEEECCBTTTCTTSCCSCCCCBEE
T ss_pred CCEEEEeeEEEcCCCCceEEECCC-----CCcEEEEEEEeeEEECccccccccceEEEecccccccCccccCcCCCceEc
Confidence 899999999975 467 999984 4789999999999998763 4458871 1 2 1268999
Q ss_pred cEEEEeEEEeCCC-ccEEEEeeeCCCCCCCCCccCceEEEeEEEEeEEEEccC-----CceEEEEecCC------CCEEc
Q 040962 142 GFTFENIFMSNVE-NPIVIDQMYCPHGSCNQKITSNVQIKDVTYRNIWGTSST-----KVAVNFQCSKT------FPCEN 209 (247)
Q Consensus 142 nI~f~ni~~~~~~-~~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~-----~~~~~i~g~~~------~~~~n 209 (247)
||+|+||+|+++. +++.+.+.+. ....+++||+|+||+++... ..+..+.|.++ .+|+|
T Consensus 440 nI~f~NI~i~nv~~~g~~~~~~~g---------~pg~~I~nI~i~NI~i~~~~~~~~~~~~~~i~G~~~~~~~~~~~v~n 510 (549)
T 1x0c_A 440 NMTVRNITWSNFRAEGSSSALFRI---------NPIQNLDNISIKNVSIESFEPLSINTTESWMPVWYDLNNGKQITVTD 510 (549)
T ss_dssp EEEEEEEEEEEEEEEEEECCSEEE---------CCSEEEEEEEEEEEEEEEECCGGGTCSCEEECCCBBTTTCCBCCEEE
T ss_pred cEEEEeEEEEeEEEeceEEeeecC---------CCCCcCccEEEEEEEEEccccccccccceEEeCCCccccccceeeee
Confidence 9999999999986 5555433321 12347999999999987754 34566776543 78999
Q ss_pred EEEEeEEEEec
Q 040962 210 IVLQDIYLVHN 220 (247)
Q Consensus 210 i~~~nv~i~~~ 220 (247)
|+|+||++.+.
T Consensus 511 I~f~NV~i~G~ 521 (549)
T 1x0c_A 511 FSIEGFTVGNT 521 (549)
T ss_dssp EEEEEEEETTE
T ss_pred EEEEeEEEeCe
Confidence 99999998644
No 12
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=100.00 E-value=2.9e-33 Score=261.74 Aligned_cols=187 Identities=13% Similarity=0.074 Sum_probs=156.2
Q ss_pred EEccEEEEeeEEeCCCCcEEEEeceecE--EEEeEEEEcCCCCCCCCeeeecCcccEEEEeeEEccCCceEEecCCcEeE
Q 040962 6 FVTNSRISGITSVNSKNAHISLYGCHKV--SIDNIKITAPYQSPNTDGIKIGDSKGIKITHSSIGTGDDCIALLSGSTNI 83 (247)
Q Consensus 6 ~~~nv~i~giti~n~~~~~i~~~~~~nv--~i~n~~I~~~~~~~n~DGidi~~s~nV~I~n~~i~~~DD~i~i~s~~~nV 83 (247)
+|+||+|+||+++|||+|++++..|++| +|+|+++.++. .+|+||||+. +||+|+||+|.++||||+||+ +||
T Consensus 331 ~c~NV~I~Giti~NSp~w~i~~~~c~nV~~~I~nv~i~~~~-~~nTDGIDi~--~NV~I~nc~I~~gDDcIaIks--~NI 405 (574)
T 1ogo_X 331 GGQTWYCVGPTINAPPFNTMDFNGNSGISSQISDYKQVGAF-FFQTDGPEIY--PNSVVHDVFWHVNDDAIKIYY--SGA 405 (574)
T ss_dssp SSEEEEEESCEEECCSSCSEEECSSSCEEEEEEEEEEECCC-STTCCCCBCC--TTCEEEEEEEEESSCSEECCS--TTC
T ss_pred CceeEEEECeEEECCCCcEEeecCCCChhhEEEeeEeeCCC-CCCCccCccc--CCEEEEeeEEECCCCEEEECC--ccE
Confidence 9999999999999999999999999999 99999999854 4579999998 999999999999999999998 899
Q ss_pred EEEeeEEcCC--Ce-EEEEeccccCCCCcEEEEEEEeeEEeCCce--------eEEEEE----------ecCCCCceEEc
Q 040962 84 NVTDVTCGPG--HG-ISVGSLGRYANERNVHGLAVRNCTFRGTTN--------GVRIKT----------WASPQANVASG 142 (247)
Q Consensus 84 ~I~nc~~~~~--~g-i~igs~g~~~~~~~i~nI~v~ni~~~~~~~--------gi~ik~----------~~~~~~g~i~n 142 (247)
+|+||+++.+ +| |+|||. .+.++||+|+||+|.++.. +..|++ ..+ .| | |
T Consensus 406 ~I~nc~i~~g~g~g~IsIGS~-----~g~V~NV~v~N~~i~~~~~~~~~~~~~g~iiGs~~~y~~~~~~~~g--~g-V-N 476 (574)
T 1ogo_X 406 SVSRATIWKCHNDPIIQMGWT-----SRDISGVTIDTLNVIHTRYIKSETVVPSAIIGASPFYASGMSPDSR--KS-I-S 476 (574)
T ss_dssp EEEEEEEEECSSSCSEECCSS-----CCCEEEEEEEEEEEEECCCSSCCTTTTCEEEEECCCSSSSCCCEEE--EE-E-E
T ss_pred EEEeEEEECCCCCceEEEcCC-----CCcEEEEEEEeEEEECCcccceeccccceeeccccccccccccCCC--ce-E-E
Confidence 9999998864 56 999983 5789999999999988653 233322 112 34 8 9
Q ss_pred EEEEeEEEeCCCccEEEEeeeCCCCCCCCCccCceEEEeEEEEeEEEEc------cCCceEEEEecCCCCEEcEEEEeEE
Q 040962 143 FTFENIFMSNVENPIVIDQMYCPHGSCNQKITSNVQIKDVTYRNIWGTS------STKVAVNFQCSKTFPCENIVLQDIY 216 (247)
Q Consensus 143 I~f~ni~~~~~~~~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~~~~------~~~~~~~i~g~~~~~~~ni~~~nv~ 216 (247)
|+|+||+|+++..++ +... + ...|+||+|+||++++ ....+..+.|.+ .+++||+|+||+
T Consensus 477 I~f~NI~~~~v~~~i-i~i~-----------p-~~~I~nI~~~NI~i~g~~~~~~~~~~~~~i~G~~-~~v~nI~~~NV~ 542 (574)
T 1ogo_X 477 MTVSNVVCEGLCPSL-FRIT-----------P-LQNYKNFVVKNVAFPDGLQTNSIGTGESIIPAAS-GLTMGLAISAWT 542 (574)
T ss_dssp EEEEEEEECSSBCEE-EEEC-----------C-SEEEEEEEEEEEEETTCBCCSTTCTTCEEECCCT-TCCEEEEEEEEE
T ss_pred EEEEeEEEEceeEee-EEEC-----------C-CCCEEEEEEEeEEEeCccccccccccceeEecCC-CccceEEEEeEE
Confidence 999999999998885 4331 1 3579999999999876 323456677777 899999999999
Q ss_pred EEec
Q 040962 217 LVHN 220 (247)
Q Consensus 217 i~~~ 220 (247)
+...
T Consensus 543 i~g~ 546 (574)
T 1ogo_X 543 IGGQ 546 (574)
T ss_dssp ETTE
T ss_pred EeCE
Confidence 9544
No 13
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=99.97 E-value=9.2e-31 Score=242.73 Aligned_cols=182 Identities=14% Similarity=0.057 Sum_probs=152.8
Q ss_pred eEEEEEccEEEEeeEEeCC-CCcEEEE---eceecEEEEeEE----EEcCCCCCCCCeeeecCcccEEEEeeEEccCCce
Q 040962 2 MVFNFVTNSRISGITSVNS-KNAHISL---YGCHKVSIDNIK----ITAPYQSPNTDGIKIGDSKGIKITHSSIGTGDDC 73 (247)
Q Consensus 2 i~~~~~~nv~i~giti~n~-~~~~i~~---~~~~nv~i~n~~----I~~~~~~~n~DGidi~~s~nV~I~n~~i~~~DD~ 73 (247)
|+|.+|+ |+||+|+|+ |+|++++ ..|+||+|+|++ |.+ ++|+||| |+|+||+|.++|||
T Consensus 180 l~f~~c~---I~GITi~NSDP~w~I~iG~~~~c~NVtI~nvtfi~aI~s---spNTDGI-------V~I~nc~I~tGDDC 246 (600)
T 2x6w_A 180 GRSYNCS---VTGITFQNGDVTWAITLGWNGYGSNCYVRKCRFINLVNS---SVNADHS-------TVYVNCPYSGVESC 246 (600)
T ss_dssp CSEEEEE---EESCEEESCCCSCSEEECBTTBEEEEEEESCEEECCCCC---SSCCCEE-------EEEECSSSEEEESC
T ss_pred EEEeeeE---EeCeEEECCCCccEEEeCCCCCcccEEEeCeEEcceEec---CCCCCEE-------EEEEeeEEecCCcE
Confidence 4578888 999999999 9999999 999999999999 776 6899999 99999999999999
Q ss_pred EEe-cCCc-EeEEEEeeEEcCCC-eEEEEeccccCCCCcEEEEEEEeeEEeCCceeEEEEEecCCCCceEEcEEEEeEEE
Q 040962 74 IAL-LSGS-TNINVTDVTCGPGH-GISVGSLGRYANERNVHGLAVRNCTFRGTTNGVRIKTWASPQANVASGFTFENIFM 150 (247)
Q Consensus 74 i~i-~s~~-~nV~I~nc~~~~~~-gi~igs~g~~~~~~~i~nI~v~ni~~~~~~~gi~ik~~~~~~~g~i~nI~f~ni~~ 150 (247)
|+| |+++ .++.++ ++..+| ||+|||+ +.+.++||+|+| +||++.+ ++|.|+||+|+||+|
T Consensus 247 IAI~KSGs~~ni~~e--~~~~GHgGISIGSe----~~ggV~NV~V~N----------rIKt~~G-~GG~V~NItfeNI~m 309 (600)
T 2x6w_A 247 YFSMSSSFARNIACS--VQLHQHDTFYRGST----VNGYCRGAYVVM----------HAAEAAG-AGSYAYNMQVENNIA 309 (600)
T ss_dssp EEECCCTTHHHHEEE--EEECSSSEEEESCE----EEEESEEEEEEE----------CGGGCTT-TCSEEEEEEEESCEE
T ss_pred EEEecCCCcCCeEEE--EEcCCCCcEEeccc----ccCcEEEEEEEE----------EEEeecC-CCceEEEEEEEEEEE
Confidence 999 9986 347777 667777 8999998 567899999999 5566555 579999999999999
Q ss_pred eCCCccEEEEeeeCCCCCCCCCccCceEEEeEEEEeEEEEccCC------ceEEEEecCC-------CCEEcEEEEeEEE
Q 040962 151 SNVENPIVIDQMYCPHGSCNQKITSNVQIKDVTYRNIWGTSSTK------VAVNFQCSKT-------FPCENIVLQDIYL 217 (247)
Q Consensus 151 ~~~~~~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~------~~~~i~g~~~-------~~~~ni~~~nv~i 217 (247)
+++..++.+.+.+ ..+..++|+||+|+||+++.... ++..+.+.|+ .++++|+|+|+++
T Consensus 310 ~nV~~~I~i~q~~--------~~~s~~~IsnItfkNItgTsas~aav~~~~g~~i~g~p~~~~~~~~~~Ie~V~~~~~~~ 381 (600)
T 2x6w_A 310 VIYGQFVILGSDV--------TATVSGHLNDVIVSGNIVSIGERAAFSAPFGAFIDIGPDNSGASNVQDIQRVLVTGNSF 381 (600)
T ss_dssp EESSEEEEEEECB--------CSSCBCEEEEEEEESCEEEECSCCTTSSSCEEEEEECCCTTCCSSSCCEEEEEEESCEE
T ss_pred EccceEEEeCCCC--------CCCCCceEEEEEEEeEEEEeccccccccccceEEEecCcccccccccceeEEEEeceEE
Confidence 9999887776541 12445799999999999987532 3467777653 6899999999999
Q ss_pred EecC
Q 040962 218 VHNG 221 (247)
Q Consensus 218 ~~~~ 221 (247)
..++
T Consensus 382 ~~~~ 385 (600)
T 2x6w_A 382 YAPA 385 (600)
T ss_dssp ECCT
T ss_pred EcCC
Confidence 6644
No 14
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=99.95 E-value=6e-27 Score=214.37 Aligned_cols=205 Identities=13% Similarity=0.158 Sum_probs=165.8
Q ss_pred CeEEEEEccEEEEeeEEeCC--CCcEEEEeceecEEEEeEEEEcCCC------CCCCCeeeec-CcccEEEEeeEE--cc
Q 040962 1 SMVFNFVTNSRISGITSVNS--KNAHISLYGCHKVSIDNIKITAPYQ------SPNTDGIKIG-DSKGIKITHSSI--GT 69 (247)
Q Consensus 1 ~i~~~~~~nv~i~giti~n~--~~~~i~~~~~~nv~i~n~~I~~~~~------~~n~DGidi~-~s~nV~I~n~~i--~~ 69 (247)
.+++.+|+|++|+++++.++ ..+++++.+|+||+|+|++|.+.+| .++.||+++. .|+||+|+||++ ..
T Consensus 215 ~i~~~~~~nv~i~~v~I~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~ 294 (448)
T 3jur_A 215 CIHPVLSENVIIRNIEISSTGPNNDGIDPESCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQA 294 (448)
T ss_dssp SEEEESCEEEEEESCEEEECSTTCCSBCCBSCEEEEEESCEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSS
T ss_pred eEeeeccCCEEEEeEEEeeccCCCccccccCCcCEEEEeeEEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecCC
Confidence 37899999999999999986 3468999999999999999999876 2345565554 389999999999 55
Q ss_pred CCceEEecCC----cEeEEEEeeEEcCC-CeEEEEeccccCCCCcEEEEEEEeeEEeCCceeE-EEEEecC----CCCce
Q 040962 70 GDDCIALLSG----STNINVTDVTCGPG-HGISVGSLGRYANERNVHGLAVRNCTFRGTTNGV-RIKTWAS----PQANV 139 (247)
Q Consensus 70 ~DD~i~i~s~----~~nV~I~nc~~~~~-~gi~igs~g~~~~~~~i~nI~v~ni~~~~~~~gi-~ik~~~~----~~~g~ 139 (247)
++.||+++|. .+||+|+||++..+ +|++||+... ..+.++||+|+|++|.+..+++ .|+..+. ...+.
T Consensus 295 gh~gisiGS~~~~~v~nV~v~n~~~~~t~~GirIKt~~g--~gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~~~~~~~~ 372 (448)
T 3jur_A 295 SHGGLVIGSEMSGGVRNVVARNNVYMNVERALRLKTNSR--RGGYMENIFFIDNVAVNVSEEVIRINLRYDNEEGEYLPV 372 (448)
T ss_dssp CSEEEEECSSCTTCEEEEEEESCEEESCSEEEEEECCTT--TCSEEEEEEEESCEEEEESSEEEEEESCGGGCCCSCCCE
T ss_pred CcceEEECCcccCcEEEEEEEEEEEecccceEEEEEEcC--CCceEeeEEEEEEEEECCccccEEEEeeccCCCCCCCce
Confidence 6779999874 59999999999876 7999998633 3478999999999999998888 8886542 13578
Q ss_pred EEcEEEEeEEEeCCCccEEEEeeeCCCCCCCCCccCceEEEeEEEEeEEEEccCCceEEEEe----cCCCCEEcEEEEeE
Q 040962 140 ASGFTFENIFMSNVENPIVIDQMYCPHGSCNQKITSNVQIKDVTYRNIWGTSSTKVAVNFQC----SKTFPCENIVLQDI 215 (247)
Q Consensus 140 i~nI~f~ni~~~~~~~~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~g----~~~~~~~ni~~~nv 215 (247)
|+||+|+||++++...++.|... + ..+++||+|+||+++... .+..+.. .+...++|++|+||
T Consensus 373 i~nI~~~NI~~t~~~~~i~i~g~-----------~-~~p~~~I~~~nv~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~nv 439 (448)
T 3jur_A 373 VRSVFVKNLKATGGKYAVRIEGL-----------E-NDYVKDILISDTIIEGAK-ISVLLEFGQLGMENVIMNGSRFEKL 439 (448)
T ss_dssp EEEEEEESCEEEECSEEEEEECB-----------T-TBCEEEEEEEEEEEESCS-EEEEEEEEEEEEEEEEETTEEEEEE
T ss_pred EEEEEEEeEEEEecceEEEEEeC-----------C-CCCEeeEEEEEEEEEccc-cceeEeccccccccceecccEEEEE
Confidence 99999999999987778777531 2 358999999999999763 4455543 34456999999999
Q ss_pred EEEec
Q 040962 216 YLVHN 220 (247)
Q Consensus 216 ~i~~~ 220 (247)
+|.+.
T Consensus 440 ~ing~ 444 (448)
T 3jur_A 440 YIEGK 444 (448)
T ss_dssp EEEEE
T ss_pred EEcCE
Confidence 99764
No 15
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=99.93 E-value=7.4e-24 Score=187.91 Aligned_cols=200 Identities=18% Similarity=0.196 Sum_probs=161.8
Q ss_pred EEccEEEEee---EEeCCC--Cc-------------EEEEeceecEEEEeEEEEcCCCCCCCCeeeecCcccEEEEeeEE
Q 040962 6 FVTNSRISGI---TSVNSK--NA-------------HISLYGCHKVSIDNIKITAPYQSPNTDGIKIGDSKGIKITHSSI 67 (247)
Q Consensus 6 ~~~nv~i~gi---ti~n~~--~~-------------~i~~~~~~nv~i~n~~I~~~~~~~n~DGidi~~s~nV~I~n~~i 67 (247)
..++|+|.|. +|.-.. .| .+++..|+|++|++++|.+++. +++++..|+||+|++++|
T Consensus 70 ~~~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~----~~i~i~~~~nv~i~~~~I 145 (339)
T 1ia5_A 70 SGSDLTITGASGHSINGDGSRWWDGEGGNGGKTKPKFFAAHSLTNSVISGLKIVNSPV----QVFSVAGSDYLTLKDITI 145 (339)
T ss_dssp EEESCEEEECTTCEEECCGGGTCSSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCSS----CCEEEESCEEEEEESCEE
T ss_pred EcCcEEEEcCCCeEEeCCCCccccccccCCCCCCCeEEEEeecCcEEEEEEEEEcCCc----ceEEEecccCeEEeeEEE
Confidence 4599999997 664321 23 4899999999999999999753 479999999999999999
Q ss_pred ccC---------CceEEecCCcEeEEEEeeEEcCC-CeEEEEeccccCCCCcEEEEEEEeeEEeCCceeEEEEEecCCCC
Q 040962 68 GTG---------DDCIALLSGSTNINVTDVTCGPG-HGISVGSLGRYANERNVHGLAVRNCTFRGTTNGVRIKTWASPQA 137 (247)
Q Consensus 68 ~~~---------DD~i~i~s~~~nV~I~nc~~~~~-~gi~igs~g~~~~~~~i~nI~v~ni~~~~~~~gi~ik~~~~~~~ 137 (247)
.+. .|+|.+.+ ++||+|+||++..+ ++|+|++. +||+|+||++... +|+.|++......
T Consensus 146 ~~~~~d~~~~~ntDGid~~~-s~nV~I~n~~i~~gDDcIaiksg---------~nI~i~n~~~~~g-hGisiGS~g~~~~ 214 (339)
T 1ia5_A 146 DNSDGDDNGGHNTDAFDIGT-STYVTISGATVYNQDDCVAVNSG---------ENIYFSGGYCSGG-HGLSIGSVGGRSD 214 (339)
T ss_dssp ECGGGTTTTCCSCCSEEEES-CEEEEEESCEEECSSCSEEESSE---------EEEEEESCEEESS-SCEEEEEECSSSC
T ss_pred ECCccccccCCCCCcEEecC-CceEEEEeeEEEcCCCeEEEeCC---------eEEEEEeEEEECC-ceEEECcCCcccC
Confidence 863 57899987 89999999999876 58999862 9999999999986 5899998643235
Q ss_pred ceEEcEEEEeEEEeCCCccEEEEeeeCCCCCCCCCccCceEEEeEEEEeEEEEccCCceEEEEec-------C--CCCEE
Q 040962 138 NVASGFTFENIFMSNVENPIVIDQMYCPHGSCNQKITSNVQIKDVTYRNIWGTSSTKVAVNFQCS-------K--TFPCE 208 (247)
Q Consensus 138 g~i~nI~f~ni~~~~~~~~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~g~-------~--~~~~~ 208 (247)
+.++||+|+|+++.+..++++|+.+- .+.+.++||+|+||++.....+|+.|... | ..+++
T Consensus 215 ~~v~nV~v~n~~~~~t~~girIKt~~----------g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~p~~~~~i~ 284 (339)
T 1ia5_A 215 NTVKNVTFVDSTIINSDNGVRIKTNI----------DTTGSVSDVTYKDITLTSIAKYGIVVQQNYGDTSSTPTTGVPIT 284 (339)
T ss_dssp CEEEEEEEEEEEEESCSEEEEEEEET----------TCCCEEEEEEEEEEEEEEESSEEEEEEEEETCTTSCCCSSSCEE
T ss_pred CCEEEEEEEeeEEECCCcEEEEEEeC----------CCCcEEEeeEEEEEEEECcccccEEEEccCCCCCCCCcCCceEE
Confidence 89999999999999999999999741 22468999999999999765558887641 2 25799
Q ss_pred cEEEEeEEEEecCCCCccCeee
Q 040962 209 NIVLQDIYLVHNGRDGAATSSC 230 (247)
Q Consensus 209 ni~~~nv~i~~~~~~~~~~~~c 230 (247)
||+|+||+.+...+..+....|
T Consensus 285 ni~~~ni~gt~~~~~~~v~i~c 306 (339)
T 1ia5_A 285 DFVLDNVHGSVVSSGTNILISC 306 (339)
T ss_dssp EEEEEEEEEEECTTSEEEEEEC
T ss_pred EEEEEeEEEEeCCCCEEEEEEe
Confidence 9999999999876322344444
No 16
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=99.93 E-value=9.3e-24 Score=187.30 Aligned_cols=200 Identities=16% Similarity=0.174 Sum_probs=161.4
Q ss_pred EEccEEEEee---EEeCC--CCc-------------EEEEeceecEEEEeEEEEcCCCCCCCCeeeecCcccEEEEeeEE
Q 040962 6 FVTNSRISGI---TSVNS--KNA-------------HISLYGCHKVSIDNIKITAPYQSPNTDGIKIGDSKGIKITHSSI 67 (247)
Q Consensus 6 ~~~nv~i~gi---ti~n~--~~~-------------~i~~~~~~nv~i~n~~I~~~~~~~n~DGidi~~s~nV~I~n~~i 67 (247)
..++|+|.|. +|.-. ..| .+.+..|+|++|+++++.+++. +++++..|+||+|++++|
T Consensus 66 ~~~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~giti~nsp~----~~i~i~~~~nv~i~~~~I 141 (339)
T 2iq7_A 66 SGTNININGASGHSIDCQGSRWWDSKGSNGGKTKPKFFYAHSLKSSNIKGLNVLNTPV----QAFSINSATTLGVYDVII 141 (339)
T ss_dssp EEESCEEEECTTCEEECCGGGTCCSCGGGSSSCCCCCEEEEEEEEEEEECCEEECCSS----CCEEEESCEEEEEESCEE
T ss_pred EcccEEEEcCCCCEEECCcccccccccccCCCCCCeEEEEeeeCcEEEEEEEEEeCCc----ceEEEeccCCEEEEEEEE
Confidence 4599999997 66432 234 4899999999999999999753 479999999999999999
Q ss_pred ccC---------CceEEecCCcEeEEEEeeEEcCC-CeEEEEeccccCCCCcEEEEEEEeeEEeCCceeEEEEEecCCCC
Q 040962 68 GTG---------DDCIALLSGSTNINVTDVTCGPG-HGISVGSLGRYANERNVHGLAVRNCTFRGTTNGVRIKTWASPQA 137 (247)
Q Consensus 68 ~~~---------DD~i~i~s~~~nV~I~nc~~~~~-~gi~igs~g~~~~~~~i~nI~v~ni~~~~~~~gi~ik~~~~~~~ 137 (247)
.+. .|+|.+.+ ++||+|+||++..+ ++|+|++. +||+|+||++... +|+.|++......
T Consensus 142 ~~~~~d~~~~~ntDGid~~~-s~nV~I~n~~i~~gDDciaiksg---------~nI~i~n~~~~~g-hGisiGSlg~~~~ 210 (339)
T 2iq7_A 142 DNSAGDSAGGHNTDAFDVGS-STGVYISGANVKNQDDCLAINSG---------TNITFTGGTCSGG-HGLSIGSVGGRSD 210 (339)
T ss_dssp ECGGGGGTTCCSCCSEEEES-CEEEEEESCEEECSSCSEEESSE---------EEEEEESCEEESS-CCEEEEEESSSSC
T ss_pred ECCccccccCCCCCcEEEcC-cceEEEEecEEecCCCEEEEcCC---------ccEEEEeEEEECC-ceEEECcCCcccC
Confidence 863 47899987 99999999999876 58999862 9999999999987 5899998543235
Q ss_pred ceEEcEEEEeEEEeCCCccEEEEeeeCCCCCCCCCccCceEEEeEEEEeEEEEccCCceEEEEec---------CC--CC
Q 040962 138 NVASGFTFENIFMSNVENPIVIDQMYCPHGSCNQKITSNVQIKDVTYRNIWGTSSTKVAVNFQCS---------KT--FP 206 (247)
Q Consensus 138 g~i~nI~f~ni~~~~~~~~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~g~---------~~--~~ 206 (247)
+.++||+|+|+++.+..++++|+.+- .+.+.++||+|+||++.....+|+.|... |. .+
T Consensus 211 ~~v~nV~v~n~~~~~~~~girIkt~~----------g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~~p~~~~~ 280 (339)
T 2iq7_A 211 NTVKTVTISNSKIVNSDNGVRIKTVS----------GATGSVSGVTYSGITLSNIAKYGIVIEQDYENGSPTGTPTNGVP 280 (339)
T ss_dssp CEEEEEEEEEEEEESCSEEEEEEEET----------TCCCEEEEEEEEEEEEEEESSEEEEEEEEEETTEECSCCCSSSC
T ss_pred CCEEEEEEEeeEEECCCcEEEEEEeC----------CCCeEEEEEEEEeEEccCcccccEEEEeecCCCCCCCCCCCCce
Confidence 89999999999999999999999751 22468999999999999765558777531 22 57
Q ss_pred EEcEEEEeEEEEecCCCCccCeee
Q 040962 207 CENIVLQDIYLVHNGRDGAATSSC 230 (247)
Q Consensus 207 ~~ni~~~nv~i~~~~~~~~~~~~c 230 (247)
++||+|+||+.+...+..+....|
T Consensus 281 i~ni~~~ni~gt~~~~~~~~~i~c 304 (339)
T 2iq7_A 281 ITGLTLSKITGSVASSGTNVYILC 304 (339)
T ss_dssp EEEEEEEEEEEEECTTSEEEEEEC
T ss_pred EEEEEEEeEEEEeCCCCEEEEEEe
Confidence 999999999999876322444444
No 17
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.93 E-value=4.1e-24 Score=190.92 Aligned_cols=202 Identities=17% Similarity=0.182 Sum_probs=160.3
Q ss_pred eEEEEEccEEEEe---eEEeCC--CCc------------EEEEeceecEEEEeEEEEcCCCCCCCCeeeecCcccEEEEe
Q 040962 2 MVFNFVTNSRISG---ITSVNS--KNA------------HISLYGCHKVSIDNIKITAPYQSPNTDGIKIGDSKGIKITH 64 (247)
Q Consensus 2 i~~~~~~nv~i~g---iti~n~--~~~------------~i~~~~~~nv~i~n~~I~~~~~~~n~DGidi~~s~nV~I~n 64 (247)
|.+ +.+|++|.| -+|.-. ..| .+++..|+|++|+++++.+++. .++++. |+||+|+|
T Consensus 90 i~~-~~~nv~I~G~~~g~IdG~G~~~w~~~~~~~~~rP~~i~~~~~~nv~i~~iti~nsp~----~~i~i~-~~nv~i~~ 163 (362)
T 1czf_A 90 ISM-SGEHITVTGASGHLINCDGARWWDGKGTSGKKKPKFFYAHGLDSSSITGLNIKNTPL----MAFSVQ-ANDITFTD 163 (362)
T ss_dssp EEE-EEESCEEEECTTCEEECCGGGTCCSCTTSSSCCCCCEEEEEEETEEEESCEEECCSS----CCEEEE-CSSEEEES
T ss_pred EEE-eCccEEEEcCCCcEEECCCchhhcccCCCCCCCCeEEEEeecccEEEEEEEEecCCc----cEEEEe-eCCEEEEE
Confidence 344 569999999 455322 234 4899999999999999999753 269999 99999999
Q ss_pred eEEccC---------CceEEecCCcEeEEEEeeEEcCC-CeEEEEeccccCCCCcEEEEEEEeeEEeCCceeEEEEEecC
Q 040962 65 SSIGTG---------DDCIALLSGSTNINVTDVTCGPG-HGISVGSLGRYANERNVHGLAVRNCTFRGTTNGVRIKTWAS 134 (247)
Q Consensus 65 ~~i~~~---------DD~i~i~s~~~nV~I~nc~~~~~-~gi~igs~g~~~~~~~i~nI~v~ni~~~~~~~gi~ik~~~~ 134 (247)
++|.+. .|+|.+.+ ++||+|+||++..+ ++|+||+. +||+|+||++.+. +|+.|++...
T Consensus 164 ~~I~~~~~d~~~~~NtDGidi~~-s~nV~I~n~~i~~gDDcIaiksg---------~nI~i~n~~~~~g-hGisiGS~G~ 232 (362)
T 1czf_A 164 VTINNADGDTQGGHNTDAFDVGN-SVGVNIIKPWVHNQDDCLAVNSG---------ENIWFTGGTCIGG-HGLSIGSVGD 232 (362)
T ss_dssp CEEECGGGGTTTCCSCCSEEECS-CEEEEEESCEEECSSCSEEESSE---------EEEEEESCEEESS-CCEEEEEECS
T ss_pred EEEECCccccccCCCCCceeecC-cceEEEEeeEEecCCCEEEEeCC---------eEEEEEEEEEeCC-ceeEEeeccc
Confidence 999872 47899987 89999999999987 58999862 9999999999986 5899998632
Q ss_pred CCCceEEcEEEEeEEEeCCCccEEEEeeeCCCCCCCCCccCceEEEeEEEEeEEEEccCCceEEEEec---------C--
Q 040962 135 PQANVASGFTFENIFMSNVENPIVIDQMYCPHGSCNQKITSNVQIKDVTYRNIWGTSSTKVAVNFQCS---------K-- 203 (247)
Q Consensus 135 ~~~g~i~nI~f~ni~~~~~~~~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~g~---------~-- 203 (247)
...+.|+||+|+|+++.+..++++|+.+. .+.+.++||+|+||++......|+.|... |
T Consensus 233 ~~~~~v~nV~v~n~~~~~t~~GirIKt~~----------g~~G~v~nI~~~ni~~~~v~~~~i~I~~~Y~~~~~~~~p~~ 302 (362)
T 1czf_A 233 RSNNVVKNVTIEHSTVSNSENAVRIKTIS----------GATGSVSEITYSNIVMSGISDYGVVIQQDYEDGKPTGKPTN 302 (362)
T ss_dssp SSCCEEEEEEEEEEEEEEEEEEEEEEEET----------TCCEEEEEEEEEEEEEEEEEEEEEEEEEEEETTEECSCCCS
T ss_pred cCCCCEEEEEEEeeEEECCceEEEEEEeC----------CCCceEeeEEEEeEEEECcccccEEEEEecCCCCCCCCCCC
Confidence 23589999999999999999999999751 23478999999999988864467777521 2
Q ss_pred CCCEEcEEEEeEEEEecCCCCccCeee
Q 040962 204 TFPCENIVLQDIYLVHNGRDGAATSSC 230 (247)
Q Consensus 204 ~~~~~ni~~~nv~i~~~~~~~~~~~~c 230 (247)
..+++||+|+||+.+...+..+....|
T Consensus 303 ~~~i~nI~~~ni~gt~~~~~~~i~i~c 329 (362)
T 1czf_A 303 GVTIQDVKLESVTGSVDSGATEIYLLC 329 (362)
T ss_dssp SEEEEEEEEEEEEEEECTTSEEEEEEC
T ss_pred CceEEEEEEEEEEEEecCCceEEEEEe
Confidence 247999999999999876322344443
No 18
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=99.92 E-value=1.2e-23 Score=199.50 Aligned_cols=199 Identities=13% Similarity=0.063 Sum_probs=163.2
Q ss_pred CeEEEEEccEEEEeeEEeC--CC-CcEEEEeceecEEEEeEEEEcCCC------CCCCCeeeecCcccEEEEeeEEccCC
Q 040962 1 SMVFNFVTNSRISGITSVN--SK-NAHISLYGCHKVSIDNIKITAPYQ------SPNTDGIKIGDSKGIKITHSSIGTGD 71 (247)
Q Consensus 1 ~i~~~~~~nv~i~giti~n--~~-~~~i~~~~~~nv~i~n~~I~~~~~------~~n~DGidi~~s~nV~I~n~~i~~~D 71 (247)
.|++.+|+|++|+++++.+ +| ..++++.+|+||+|+|++|.+.+| +++.||++...|+||+|+||++..++
T Consensus 356 ~i~~~~~~nv~i~~v~i~~~~~~NtDGidi~~s~nV~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~gh 435 (608)
T 2uvf_A 356 GIMNLENHNVVANGLIHQTYDANNGDGIEFGNSQNVMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGH 435 (608)
T ss_dssp SEEEESCEEEEEESCEEECTTCTTCCSEEEESCEEEEEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSS
T ss_pred EEEEecCCCEEEeeEEEcCCCCCCCCeEEecCCceEEEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCC
Confidence 3789999999999999865 23 468999999999999999999887 35778888788999999999999999
Q ss_pred ceEEecCC----cEeEEEEeeEEcCC-CeEEEEeccccCCCCcEEEEEEEeeEEeCC-ceeEEEEEecCC----------
Q 040962 72 DCIALLSG----STNINVTDVTCGPG-HGISVGSLGRYANERNVHGLAVRNCTFRGT-TNGVRIKTWASP---------- 135 (247)
Q Consensus 72 D~i~i~s~----~~nV~I~nc~~~~~-~gi~igs~g~~~~~~~i~nI~v~ni~~~~~-~~gi~ik~~~~~---------- 135 (247)
++++++++ .+||+|+||++.++ +||+||+... ..+.++||+|+|++|.+. ..+|.|+..++.
T Consensus 436 g~~~iGS~~~~~v~nI~v~n~~~~~t~~GirIKt~~g--~gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~ 513 (608)
T 2uvf_A 436 GAIVTGSHTGAWIEDILAENNVMYLTDIGLRAKSTST--IGGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPA 513 (608)
T ss_dssp CSEEEESCCTTCEEEEEEESCEEESCSEEEEEEEETT--TCCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCC
T ss_pred CeEEEcccCCCCEEEEEEEeEEEECCCceEEEeeecC--CCceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCc
Confidence 99889874 59999999999986 6999998643 346799999999999998 589999976531
Q ss_pred -CCceEEcEEEEeEEEeCCC---ccEEEEeeeCCCCCCCCCccCceEEEeEEEEeEEEEccCCceEEEEecCCCCEEcEE
Q 040962 136 -QANVASGFTFENIFMSNVE---NPIVIDQMYCPHGSCNQKITSNVQIKDVTYRNIWGTSSTKVAVNFQCSKTFPCENIV 211 (247)
Q Consensus 136 -~~g~i~nI~f~ni~~~~~~---~~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~g~~~~~~~ni~ 211 (247)
..+.+++|+|+||++++.. .++.|... + ....+++||+|+||+++... +..+. .+++++
T Consensus 514 ~~~~~~~~V~i~nI~~~n~~gt~~~i~i~g~-~---------~~~~p~~ni~~~nv~i~~~~--~~~i~-----~~~~~~ 576 (608)
T 2uvf_A 514 KIPAQFYDFTLKNVTVDNSTGKNPSIEIKGD-T---------ANKAWHRLVHVNNVQLNNVT--PTAIS-----DLRDSE 576 (608)
T ss_dssp SSCCEEEEEEEEEEEEEEECSSSCSEEEECB-G---------GGTBCEEEEEEEEEEEESCC--CCEEE-----SEESCE
T ss_pred CCCCccccEEEEeEEEEeeeceEEeEEEEEE-c---------CCCCccccEEEEeEEEEccC--ceeEE-----eccCce
Confidence 1367999999999999865 46666642 1 22358999999999999853 45555 478888
Q ss_pred EEeEEEE
Q 040962 212 LQDIYLV 218 (247)
Q Consensus 212 ~~nv~i~ 218 (247)
|+||+++
T Consensus 577 ~~nv~i~ 583 (608)
T 2uvf_A 577 FNKVTFT 583 (608)
T ss_dssp EEEEEEE
T ss_pred EEeEEEe
Confidence 8888887
No 19
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.92 E-value=5.1e-23 Score=182.36 Aligned_cols=199 Identities=14% Similarity=0.207 Sum_probs=160.1
Q ss_pred EEccEEEEee---EEeCC--CCc-------------EEEEeceecEEEEeEEEEcCCCCCCCCeeeecCcccEEEEeeEE
Q 040962 6 FVTNSRISGI---TSVNS--KNA-------------HISLYGCHKVSIDNIKITAPYQSPNTDGIKIGDSKGIKITHSSI 67 (247)
Q Consensus 6 ~~~nv~i~gi---ti~n~--~~~-------------~i~~~~~~nv~i~n~~I~~~~~~~n~DGidi~~s~nV~I~n~~i 67 (247)
..++|+|.|. +|.-. ..| .+.+..|+|++|++++|.+++. .++++. |+||+|++++|
T Consensus 66 ~~~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~----~~i~i~-~~nv~i~~~~I 140 (336)
T 1nhc_A 66 GGKDLTVTMADGAVIDGDGSRWWDSKGTNGGKTKPKFMYIHDVEDSTFKGINIKNTPV----QAISVQ-ATNVHLNDFTI 140 (336)
T ss_dssp CEESCEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCSS----CCEEEE-EEEEEEESCEE
T ss_pred ecCCEEEEcCCCeEEECCccccccccCcCCCCCCceEEEEeeeCcEEEEEEEEEeCCc----cEEEEE-eCCEEEEEEEE
Confidence 4699999997 55322 224 4899999999999999999753 269999 99999999999
Q ss_pred ccC---------CceEEecCCcEeEEEEeeEEcCC-CeEEEEeccccCCCCcEEEEEEEeeEEeCCceeEEEEEecCCCC
Q 040962 68 GTG---------DDCIALLSGSTNINVTDVTCGPG-HGISVGSLGRYANERNVHGLAVRNCTFRGTTNGVRIKTWASPQA 137 (247)
Q Consensus 68 ~~~---------DD~i~i~s~~~nV~I~nc~~~~~-~gi~igs~g~~~~~~~i~nI~v~ni~~~~~~~gi~ik~~~~~~~ 137 (247)
.+. .|+|.+.+ ++||+|+||++..+ ++++|++. +||+|+||++... +|+.|++......
T Consensus 141 ~~~~~d~~~~~ntDGidi~~-s~nV~I~n~~i~~gDDciaiksg---------~nI~i~n~~~~~g-hGisiGS~g~~~~ 209 (336)
T 1nhc_A 141 DNSDGDDNGGHNTDGFDISE-STGVYISGATVKNQDDCIAINSG---------ESISFTGGTCSGG-HGLSIGSVGGRDD 209 (336)
T ss_dssp ECTTHHHHTCCSCCSEEECS-CEEEEEESCEEESSSEEEEESSE---------EEEEEESCEEESS-SEEEEEEESSSSC
T ss_pred ECCCcccccCCCCCcEEecC-CCeEEEEeCEEEcCCCEEEEeCC---------eEEEEEeEEEECC-cCceEccCccccC
Confidence 874 58899988 99999999999876 58999862 9999999999886 5899998643235
Q ss_pred ceEEcEEEEeEEEeCCCccEEEEeeeCCCCCCCCCccCceEEEeEEEEeEEEEccCCceEEEEe---------cC--CCC
Q 040962 138 NVASGFTFENIFMSNVENPIVIDQMYCPHGSCNQKITSNVQIKDVTYRNIWGTSSTKVAVNFQC---------SK--TFP 206 (247)
Q Consensus 138 g~i~nI~f~ni~~~~~~~~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~g---------~~--~~~ 206 (247)
+.|+||+|+|+++.+..++++|+.+. .+.+.++||+|+||++.....+|+.|.. .| ..+
T Consensus 210 ~~v~nV~v~n~~~~~t~~girIkt~~----------g~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~~p~~~~~ 279 (336)
T 1nhc_A 210 NTVKNVTISDSTVSNSANGVRIKTIY----------KETGDVSEITYSNIQLSGITDYGIVIEQDYENGSPTGTPSTGIP 279 (336)
T ss_dssp CEEEEEEEEEEEEESCSEEEEEEEET----------TCCCEEEEEEEEEEEEEEESSEEEEEEEEEETTEECSCCCSSSC
T ss_pred CCEEEEEEEeeEEECCCcEEEEEEEC----------CCCCEEeeeEEeeEEeeccccccEEEEeecCCCCCCCCCCCCce
Confidence 89999999999999999999999741 2246899999999999887555877742 12 257
Q ss_pred EEcEEEEeEEEEecCCCCccCeee
Q 040962 207 CENIVLQDIYLVHNGRDGAATSSC 230 (247)
Q Consensus 207 ~~ni~~~nv~i~~~~~~~~~~~~c 230 (247)
++||+|+||+.+...+..+..+.|
T Consensus 280 i~~i~~~ni~gt~~~~~~~v~i~c 303 (336)
T 1nhc_A 280 ITDVTVDGVTGTLEDDATQVYILC 303 (336)
T ss_dssp EEEEEEEEEEEEECTTCEEEEEEC
T ss_pred EEEEEEEeEEEEeCCCCEEEEEEc
Confidence 999999999999876322344444
No 20
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=99.91 E-value=6.7e-22 Score=180.00 Aligned_cols=169 Identities=14% Similarity=0.180 Sum_probs=144.7
Q ss_pred EEEEeceecEEEEeEEEEcCCCCCCCCeeeecCcccEEEEeeEEcc----CCceEEecCCcEeEEEEeeEEcCCC-eEEE
Q 040962 24 HISLYGCHKVSIDNIKITAPYQSPNTDGIKIGDSKGIKITHSSIGT----GDDCIALLSGSTNINVTDVTCGPGH-GISV 98 (247)
Q Consensus 24 ~i~~~~~~nv~i~n~~I~~~~~~~n~DGidi~~s~nV~I~n~~i~~----~DD~i~i~s~~~nV~I~nc~~~~~~-gi~i 98 (247)
.+++..|+|++|++++|.+++. .++++..|+||+|+|++|.+ +.|+|.+.+ +||+|+||.+..++ +|+|
T Consensus 129 ~i~~~~~~nv~I~~iti~nsp~----~~i~i~~~~nv~I~n~~I~~~d~~ntDGidi~~--~nV~I~n~~i~~gDD~Iai 202 (422)
T 1rmg_A 129 ILRLTDVTHFSVHDIILVDAPA----FHFTMDTCSDGEVYNMAIRGGNEGGLDGIDVWG--SNIWVHDVEVTNKDECVTV 202 (422)
T ss_dssp EEEEEEEEEEEEEEEEEECCSS----CSEEEEEEEEEEEEEEEEECCSSTTCCSEEEEE--EEEEEEEEEEESSSEEEEE
T ss_pred EEEEcccceEEEECeEEECCCc----eEEEEeCcCCEEEEeEEEECCCCCCCccEeecC--CeEEEEeeEEeCCCCeEEe
Confidence 6899999999999999998642 37999999999999999998 458999987 89999999999875 7999
Q ss_pred EeccccCCCCcEEEEEEEeeEEeCCceeEEEEEecCCCCceEEcEEEEeEEEeCCCccEEEEeeeCCCCCCCCCccCceE
Q 040962 99 GSLGRYANERNVHGLAVRNCTFRGTTNGVRIKTWASPQANVASGFTFENIFMSNVENPIVIDQMYCPHGSCNQKITSNVQ 178 (247)
Q Consensus 99 gs~g~~~~~~~i~nI~v~ni~~~~~~~gi~ik~~~~~~~g~i~nI~f~ni~~~~~~~~i~i~~~y~~~~~~~~~~~~~~~ 178 (247)
++ +.+||+|+||++... +|+.|++.. +.+.|+||+|+|+++.+..++++|+.. .+.+.
T Consensus 203 ~s--------~~~nI~I~n~~~~~~-~GisIGS~g--~~~~v~nV~v~n~~~~~~~~Gi~Ikt~-----------~g~G~ 260 (422)
T 1rmg_A 203 KS--------PANNILVESIYCNWS-GGCAMGSLG--ADTDVTDIVYRNVYTWSSNQMYMIKSN-----------GGSGT 260 (422)
T ss_dssp EE--------EEEEEEEEEEEEESS-SEEEEEEEC--TTEEEEEEEEEEEEEESSSCSEEEEEB-----------BCCEE
T ss_pred CC--------CCcCEEEEeEEEcCC-cceeecccC--CCCcEEEEEEEeEEEeccceEEEEEec-----------CCCcE
Confidence 97 479999999999876 599999975 357899999999999999999999872 12368
Q ss_pred EEeEEEEeEEEEccCCceEEEEec---------CCCCEEcEEEEeEEEEecC
Q 040962 179 IKDVTYRNIWGTSSTKVAVNFQCS---------KTFPCENIVLQDIYLVHNG 221 (247)
Q Consensus 179 i~nI~~~ni~~~~~~~~~~~i~g~---------~~~~~~ni~~~nv~i~~~~ 221 (247)
++||+|+||++... ..++.+... +..+++||+|+||+.+...
T Consensus 261 v~nI~~~NI~~~~v-~~~i~i~~~y~~~~~~~~~~~~i~nI~~~nI~gt~~~ 311 (422)
T 1rmg_A 261 VSNVLLENFIGHGN-AYSLDIDGYWSSMTAVAGDGVQLNNITVKNWKGTEAN 311 (422)
T ss_dssp EEEEEEEEEEEEEE-SCSEEEETBCTTSCCBSSSCCEEEEEEEEEEEEEESC
T ss_pred EEEEEEEeEEEECc-cccEEEEeeccCCCcccCCCceEEEEEEEeEEEEecc
Confidence 99999999998776 467777631 2457999999999999864
No 21
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=99.91 E-value=3.9e-22 Score=177.43 Aligned_cols=203 Identities=20% Similarity=0.178 Sum_probs=159.8
Q ss_pred eEEEEEccEEEEe---eEEeCCC--Cc--------------EEEE-e-ceecEEEEeEEEEcCCCCCCCCeeeecCcccE
Q 040962 2 MVFNFVTNSRISG---ITSVNSK--NA--------------HISL-Y-GCHKVSIDNIKITAPYQSPNTDGIKIGDSKGI 60 (247)
Q Consensus 2 i~~~~~~nv~i~g---iti~n~~--~~--------------~i~~-~-~~~nv~i~n~~I~~~~~~~n~DGidi~~s~nV 60 (247)
|.+ ..++++|.| -+|.-.. .| .+.+ . .|+|++|+++++.+++. .++++..|+||
T Consensus 64 i~~-~~~ni~I~G~~~G~IdG~G~~ww~~~~~~~~~~~rP~~i~~~~~~~~nv~I~giti~nsp~----~~i~i~~~~nv 138 (349)
T 1hg8_A 64 IVI-SGSNITITGASGHVIDGNGQAYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNLNIQNWPV----HCFDITGSSQL 138 (349)
T ss_dssp EEE-EEESCEEEECTTCEEECCGGGTCCSCTTCTTSCCCCSEEEEEEEEESSEEEESCEEECCSS----EEEEEESCEEE
T ss_pred EEE-ECccEEEEecCCCEEcCCcchhhhcccccCCCCCCCeEEEEeecCcCcEEEEEEEEEcCCC----ceEEEeccCCE
Confidence 445 559999999 5663221 12 5777 6 78899999999999753 47999999999
Q ss_pred EEEeeEEccC-----------------CceEEecCCcEeEEEEeeEEcCC-CeEEEEeccccCCCCcEEEEEEEeeEEeC
Q 040962 61 KITHSSIGTG-----------------DDCIALLSGSTNINVTDVTCGPG-HGISVGSLGRYANERNVHGLAVRNCTFRG 122 (247)
Q Consensus 61 ~I~n~~i~~~-----------------DD~i~i~s~~~nV~I~nc~~~~~-~gi~igs~g~~~~~~~i~nI~v~ni~~~~ 122 (247)
+|++++|.+. .|+|.+.+ ++||+|+||++..+ ++|+|++. +||+|+||.+..
T Consensus 139 ~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~-s~nV~I~n~~i~~gDDcIaiksg---------~nI~i~n~~~~~ 208 (349)
T 1hg8_A 139 TISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISS-SDHVTLDNNHVYNQDDCVAVTSG---------TNIVVSNMYCSG 208 (349)
T ss_dssp EEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEES-CEEEEEEEEEEECSSCSEEESSE---------EEEEEEEEEEES
T ss_pred EEEEEEEECCCCccccccccccccCCCCCeEEEcc-ccEEEEEeeEEecCCCeEEeeCC---------eEEEEEeEEEeC
Confidence 9999999862 57899987 89999999999876 58999862 999999999987
Q ss_pred CceeEEEEEecCCCCceEEcEEEEeEEEeCCCccEEEEeeeCCCCCCCCCccCceEEEeEEEEeEEEEccCCceEEEEec
Q 040962 123 TTNGVRIKTWASPQANVASGFTFENIFMSNVENPIVIDQMYCPHGSCNQKITSNVQIKDVTYRNIWGTSSTKVAVNFQCS 202 (247)
Q Consensus 123 ~~~gi~ik~~~~~~~g~i~nI~f~ni~~~~~~~~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~g~ 202 (247)
. +||.|++......+.++||+|+|+++.+..++++|+.. ....+.++||+|+||++......|+.|...
T Consensus 209 g-hGisiGS~G~~~~~~v~nV~v~n~~~~~~~~GirIKt~----------~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~ 277 (349)
T 1hg8_A 209 G-HGLSIGSVGGKSDNVVDGVQFLSSQVVNSQNGCRIKSN----------SGATGTINNVTYQNIALTNISTYGVDVQQD 277 (349)
T ss_dssp S-CCEEEEEESSSSCCEEEEEEEEEEEEEEEEEEEEEEEE----------TTCCEEEEEEEEEEEEEEEEEEEEEEEEEE
T ss_pred C-cceEEccccccccCCEEEEEEEEEEEECCCcEEEEEec----------CCCCccccceEEEEEEEEccccccEEEEee
Confidence 6 58999987322358999999999999999999999974 123478999999999988864467777531
Q ss_pred ---------CC--CCEEcEEEEeEEEEecCCCCccCeee
Q 040962 203 ---------KT--FPCENIVLQDIYLVHNGRDGAATSSC 230 (247)
Q Consensus 203 ---------~~--~~~~ni~~~nv~i~~~~~~~~~~~~c 230 (247)
|. .+++||+|+||+.+...+..+....|
T Consensus 278 Y~~~~~~~~p~~~~~i~~I~~~ni~gt~~~~~~~v~i~c 316 (349)
T 1hg8_A 278 YLNGGPTGKPTNGVKISNIKFIKVTGTVASSAQDWFILC 316 (349)
T ss_dssp ECSSSBCSCCCSSEEEEEEEEEEEEEEECTTSEEEEEEC
T ss_pred ccCCCCCCcccCCceEEEEEEEeEEEEeCCCCEEEEEEe
Confidence 11 36999999999998876322444555
No 22
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=99.90 E-value=6.9e-23 Score=181.24 Aligned_cols=199 Identities=13% Similarity=0.140 Sum_probs=156.8
Q ss_pred eEEEEEccEEEEee--EEe-CCC-Cc-------------EEEEeceecEEEEeEEEEcCCCCCCCCeeeecCccc-EEEE
Q 040962 2 MVFNFVTNSRISGI--TSV-NSK-NA-------------HISLYGCHKVSIDNIKITAPYQSPNTDGIKIGDSKG-IKIT 63 (247)
Q Consensus 2 i~~~~~~nv~i~gi--ti~-n~~-~~-------------~i~~~~~~nv~i~n~~I~~~~~~~n~DGidi~~s~n-V~I~ 63 (247)
|.+ .++|++|.|- +|. +.. .| .+.+..|+ ++|+++++.+++. .++++..|+| |+|+
T Consensus 61 i~~-~~~ni~I~G~~G~idG~G~~ww~~~~~~~~~~rP~~i~~~~~~-v~i~giti~nsp~----~~i~i~~~~n~v~i~ 134 (335)
T 1k5c_A 61 FTI-DGTGINFVGADHIFDGNGALYWDGKGTNNGTHKPHPFLKIKGS-GTYKKFEVLNSPA----QAISVGPTDAHLTLD 134 (335)
T ss_dssp EEE-EEEEEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCSEEEEEE-EEEESCEEESCSS----CCEEEEEEEEEEEEE
T ss_pred EEE-EccCEEEEeCccEEcCChhHhhhcccccCCCCCCeEEEEeceE-EEEEEEEEECCCc----ceEEEEccCCeEEEE
Confidence 344 4699999993 442 111 12 37888999 9999999999763 3699999999 9999
Q ss_pred eeEEccC----------CceEEecCCcEeEEEEeeEEcCC-CeEEEEeccccCCCCcEEEEEEEeeEEeCCceeEEEEEe
Q 040962 64 HSSIGTG----------DDCIALLSGSTNINVTDVTCGPG-HGISVGSLGRYANERNVHGLAVRNCTFRGTTNGVRIKTW 132 (247)
Q Consensus 64 n~~i~~~----------DD~i~i~s~~~nV~I~nc~~~~~-~gi~igs~g~~~~~~~i~nI~v~ni~~~~~~~gi~ik~~ 132 (247)
+++|.+. .|+|.+ + ++||+|+||++..+ ++|+|++. +||+|+||++... +|+.|++.
T Consensus 135 ~v~I~~~~~d~~~~~~NtDGidi-~-s~nV~I~n~~i~~gDDcIaiksg---------~nI~i~n~~~~~g-hGisIGS~ 202 (335)
T 1k5c_A 135 GITVDDFAGDTKNLGHNTDGFDV-S-ANNVTIQNCIVKNQDDCIAINDG---------NNIRFENNQCSGG-HGISIGSI 202 (335)
T ss_dssp SCEEECGGGGGGGCCCSCCSEEE-E-CSSEEEESCEEESSSCSEEEEEE---------EEEEEESCEEESS-CCEEEEEE
T ss_pred EEEEECCCCcccccCCCCCeEcc-c-CCeEEEEeeEEEcCCCEEEeeCC---------eeEEEEEEEEECC-ccCeEeec
Confidence 9999873 478999 5 89999999999986 58999972 9999999999886 58999987
Q ss_pred cCCCCceEEcEEEEeEEEeCCCccEEEEeeeCCCCCCCCCccCc-eEEEeEEEEeEEEEccCCceEEEEe-------cC-
Q 040962 133 ASPQANVASGFTFENIFMSNVENPIVIDQMYCPHGSCNQKITSN-VQIKDVTYRNIWGTSSTKVAVNFQC-------SK- 203 (247)
Q Consensus 133 ~~~~~g~i~nI~f~ni~~~~~~~~i~i~~~y~~~~~~~~~~~~~-~~i~nI~~~ni~~~~~~~~~~~i~g-------~~- 203 (247)
.. .+.|+||+|+|+++.+..++++|+.+. ... +.++||+|+||+++.....|+.|.. .|
T Consensus 203 g~--~~~v~nV~v~n~~~~~t~~girIKt~~----------g~~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~~~~~~p~ 270 (335)
T 1k5c_A 203 AT--GKHVSNVVIKGNTVTRSMYGVRIKAQR----------TATSASVSGVTYDANTISGIAKYGVLISQSYPDDVGNPG 270 (335)
T ss_dssp CT--TCEEEEEEEESCEEEEEEEEEEEEEET----------TCCSCEEEEEEEESCEEEEEEEEEEEEEEEETSSSSSCC
T ss_pred cC--CCCEEEEEEEeeEEECCCceEEEEEeC----------CCCcceEeeeEEEEEEEEccccccEEEEeeCCCCCCCCC
Confidence 53 589999999999999999999999751 223 6899999999999886446887763 22
Q ss_pred -CCCEEcEEEEeEE--EEecCCCCccCeee
Q 040962 204 -TFPCENIVLQDIY--LVHNGRDGAATSSC 230 (247)
Q Consensus 204 -~~~~~ni~~~nv~--i~~~~~~~~~~~~c 230 (247)
..+++||+|+||+ .+...+..+....|
T Consensus 271 ~~~~i~nI~~~nI~~~Gt~~~~~~~i~i~c 300 (335)
T 1k5c_A 271 TGAPFSDVNFTGGATTIKVNNAATRVTVEC 300 (335)
T ss_dssp SSSCEEEEEECSSCEEEEECTTCEEEEEEC
T ss_pred CCceEEEEEEEEEEEeeEEcCCceEEEEEC
Confidence 3589999999999 44543222344444
No 23
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=99.90 E-value=1.4e-21 Score=175.54 Aligned_cols=195 Identities=16% Similarity=0.190 Sum_probs=158.5
Q ss_pred eEEEEEccEEEEee-EEeCCC----------Cc-----------------EEEEeceecEEEEeEEEEcCCCCCCCCeee
Q 040962 2 MVFNFVTNSRISGI-TSVNSK----------NA-----------------HISLYGCHKVSIDNIKITAPYQSPNTDGIK 53 (247)
Q Consensus 2 i~~~~~~nv~i~gi-ti~n~~----------~~-----------------~i~~~~~~nv~i~n~~I~~~~~~~n~DGid 53 (247)
|.+.+.+|++|.|- +|.-.. .| .+.+..|+|++|+++++.+++. .++.
T Consensus 103 I~~~~~~ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~iti~nsp~----~~i~ 178 (376)
T 1bhe_A 103 ITAVSTTNSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSPN----FHVV 178 (376)
T ss_dssp EEEESCBSCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSEEEESCEEEEEEEEEEECCSS----CSEE
T ss_pred EEEECCEeEEEEeCEEEECCCCcccCCCccccccccccccccCccCCCCeEEEEEcceEEEEEeEEEECCCc----EEEE
Confidence 45678999999986 443221 12 4789999999999999999653 2588
Q ss_pred ecCcccEEEEeeEEcc-----CCceEEecCCcEeEEEEeeEEcCC-CeEEEEeccccCCCCcEEEEEEEeeEEeCCceeE
Q 040962 54 IGDSKGIKITHSSIGT-----GDDCIALLSGSTNINVTDVTCGPG-HGISVGSLGRYANERNVHGLAVRNCTFRGTTNGV 127 (247)
Q Consensus 54 i~~s~nV~I~n~~i~~-----~DD~i~i~s~~~nV~I~nc~~~~~-~gi~igs~g~~~~~~~i~nI~v~ni~~~~~~~gi 127 (247)
+..|++|+|++++|.+ ..|+|.+.+ |+||+|+||++..+ ++|+|++.+ ...+.+||+|+||.+.. .+|+
T Consensus 179 ~~~~~~v~i~~v~I~~~~~~~NtDGid~~~-s~nV~I~n~~i~~gDDcIaiks~~---~~~~s~nI~I~n~~~~~-ghGi 253 (376)
T 1bhe_A 179 FSDGDGFTAWKTTIKTPSTARNTDGIDPMS-SKNITIAYSNIATGDDNVAIKAYK---GRAETRNISILHNDFGT-GHGM 253 (376)
T ss_dssp EESCEEEEEEEEEEECCTTCSSCCSEEEES-CEEEEEESCEEECSSCSEEEEECT---TSCCEEEEEEEEEEECS-SSCE
T ss_pred EeCCCcEEEEeEEEECCCCCCCCceEeecC-CceEEEEeCEEecCCCeEEEcccC---CCCCceEEEEEeeEEEc-cccE
Confidence 9999999999999987 368999998 89999999999986 589999843 23579999999999986 4689
Q ss_pred EEEEecCCCCceEEcEEEEeEEEeCCCccEEEEeeeCCCCCCCCCccCceEEEeEEEEeEEEEccCCceEEEEec-----
Q 040962 128 RIKTWASPQANVASGFTFENIFMSNVENPIVIDQMYCPHGSCNQKITSNVQIKDVTYRNIWGTSSTKVAVNFQCS----- 202 (247)
Q Consensus 128 ~ik~~~~~~~g~i~nI~f~ni~~~~~~~~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~g~----- 202 (247)
.|++.. . .++||+|+|+++.+..++++|+.+ ..+.+.++||+|+||++... ..|+.|...
T Consensus 254 siGSe~---~-~v~nV~v~n~~~~~t~~GirIKt~----------~g~~G~v~ni~f~ni~~~~v-~~~i~i~~~y~~~~ 318 (376)
T 1bhe_A 254 SIGSET---M-GVYNVTVDDLKMNGTTNGLRIKSD----------KSAAGVVNGVRYSNVVMKNV-AKPIVIDTVYEKKE 318 (376)
T ss_dssp EEEEEE---S-SEEEEEEEEEEEESCSEEEEEECC----------TTTCCEEEEEEEEEEEEESC-SEEEEEETTSSCCC
T ss_pred EeccCC---c-cEeeEEEEeeEEeCCCcEEEEEEe----------cCCCceEeeEEEEeEEEeCC-CceEEEEeeccCCC
Confidence 999864 2 699999999999999999999874 12347899999999999987 468888532
Q ss_pred --CCCCEEcEEEEeEEEEec
Q 040962 203 --KTFPCENIVLQDIYLVHN 220 (247)
Q Consensus 203 --~~~~~~ni~~~nv~i~~~ 220 (247)
....++||+|+||+.+..
T Consensus 319 ~~~~~~i~ni~~~ni~gt~~ 338 (376)
T 1bhe_A 319 GSNVPDWSDITFKDVTSETK 338 (376)
T ss_dssp CCCCCEEEEEEEEEEEECSC
T ss_pred CCcCcEEEEEEEEEEEEEec
Confidence 123599999999998754
No 24
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=99.89 E-value=3.3e-22 Score=186.38 Aligned_cols=151 Identities=19% Similarity=0.232 Sum_probs=111.3
Q ss_pred EEEEeceecEEEEeEEEEcCCC--------CCCCCeeeecC------cccEEEEeeEE-ccCCceEEecCCcEeEEEEee
Q 040962 24 HISLYGCHKVSIDNIKITAPYQ--------SPNTDGIKIGD------SKGIKITHSSI-GTGDDCIALLSGSTNINVTDV 88 (247)
Q Consensus 24 ~i~~~~~~nv~i~n~~I~~~~~--------~~n~DGidi~~------s~nV~I~n~~i-~~~DD~i~i~s~~~nV~I~nc 88 (247)
.+.+..|+||+|+++++.+++. ..| ||+++++ |+||+|+||+| .++||||++++ ++||+|+||
T Consensus 136 lI~f~~c~NV~I~gVti~NSp~~gI~I~~~~~N-DGid~DGi~fd~~S~NV~I~Nc~I~~tGDDcIaIks-seNI~I~Nc 213 (609)
T 3gq8_A 136 NLSIRACHNVYIRDIEAVDCTLHGIDITCGGLD-YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH-SQYINILNC 213 (609)
T ss_dssp SEEEESCEEEEEEEEEEESCSSCSEEEECSSSS-CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS-CEEEEEESC
T ss_pred EEEEEeeceEEEEeeEEEeCCCCCeEEeCCCCC-ccccCCCccccccceeEEEEeeEEEecCCCEEEecC-CeeEEEEeE
Confidence 3566666666666666665432 013 7777777 99999999999 66999999998 999999999
Q ss_pred EEcC------CCeEEEEeccccCCCCcEEEEEEEeeEEeCCceeEEEEEecCCCCceEEcEEEEe-EEEeCCC-ccEEEE
Q 040962 89 TCGP------GHGISVGSLGRYANERNVHGLAVRNCTFRGTTNGVRIKTWASPQANVASGFTFEN-IFMSNVE-NPIVID 160 (247)
Q Consensus 89 ~~~~------~~gi~igs~g~~~~~~~i~nI~v~ni~~~~~~~gi~ik~~~~~~~g~i~nI~f~n-i~~~~~~-~~i~i~ 160 (247)
+|.. ++||+||+. .+||+|+||++.++.+|++||++.+ ++.++||.++| +.++++. +.+...
T Consensus 214 ~~~gp~G~S~~~GIsIGsg--------s~NVtV~Nc~i~nt~~GIrIKt~~~--~~~v~NV~I~n~vs~~nvrsyn~r~i 283 (609)
T 3gq8_A 214 YSHDPRLTANCNGFEIDDG--------SRHVVLSNNRSKGCYGGIEIKAHGD--APAAYNISINGHMSVEDVRSYNFRHI 283 (609)
T ss_dssp EEECCSSCSSCCSEEECTT--------CEEEEEESEEEESSSEEEEEEECTT--SCCCEEEEEEEEEEESCSEEEEEEET
T ss_pred EEECCCCCCCcccEEccCC--------cccEEEEeeEEECCCCEEEEEecCC--CCccccEEEECCEeecCceEecceEE
Confidence 9943 378999853 3999999999999999999999864 68999999998 5666543 233332
Q ss_pred eeeCCCCCCCCCccCceEEEeEEEEeEEEEcc
Q 040962 161 QMYCPHGSCNQKITSNVQIKDVTYRNIWGTSS 192 (247)
Q Consensus 161 ~~y~~~~~~~~~~~~~~~i~nI~~~ni~~~~~ 192 (247)
..|.. ..|...+..||+++|+....+
T Consensus 284 G~~~a------~dp~s~~a~nV~l~n~~~~~p 309 (609)
T 3gq8_A 284 GHHAA------TAPQSVSAKNIVASNLVSIRP 309 (609)
T ss_dssp TSCST------TSCCCSSCEEEEEEEEEEESC
T ss_pred ccccC------CCCCcceecceEeecceEEee
Confidence 22221 112233568888888887664
No 25
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=99.88 E-value=3.2e-22 Score=189.35 Aligned_cols=151 Identities=19% Similarity=0.231 Sum_probs=110.5
Q ss_pred EEEEeceecEEEEeEEEEcCCC--------CCCCCeeeecC------cccEEEEeeEE-ccCCceEEecCCcEeEEEEee
Q 040962 24 HISLYGCHKVSIDNIKITAPYQ--------SPNTDGIKIGD------SKGIKITHSSI-GTGDDCIALLSGSTNINVTDV 88 (247)
Q Consensus 24 ~i~~~~~~nv~i~n~~I~~~~~--------~~n~DGidi~~------s~nV~I~n~~i-~~~DD~i~i~s~~~nV~I~nc 88 (247)
.+.+..|+||+|+|+++.+++. ..| ||+++++ |+||+|+||+| .++||||++++ ++||+|+||
T Consensus 136 lI~f~~ckNV~I~gVti~NSp~~gI~I~np~~N-DGid~DGi~fdi~S~NV~I~Nc~I~ntGDDcIAIks-SeNI~I~Nc 213 (772)
T 3gqn_A 136 NLSIRACHNVYIRDIEAVDCTLHGIDITCGGLD-YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH-SQYINILNC 213 (772)
T ss_dssp SEEEESCEEEEEEEEEEESCSSCSEEEECSSSS-CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS-CEEEEEESC
T ss_pred EEEEEeeceEEEEeEEEEeCCCCCEEEeCCCcC-CcCCCcCcccccccceEEEEeeEEEecCcCeEEecC-CceEEEEeE
Confidence 4566666666666666666432 113 7788777 99999999999 66999999998 999999999
Q ss_pred EEcC------CCeEEEEeccccCCCCcEEEEEEEeeEEeCCceeEEEEEecCCCCceEEcEEEEe-EEEeCCC-ccEEEE
Q 040962 89 TCGP------GHGISVGSLGRYANERNVHGLAVRNCTFRGTTNGVRIKTWASPQANVASGFTFEN-IFMSNVE-NPIVID 160 (247)
Q Consensus 89 ~~~~------~~gi~igs~g~~~~~~~i~nI~v~ni~~~~~~~gi~ik~~~~~~~g~i~nI~f~n-i~~~~~~-~~i~i~ 160 (247)
+|.. ++||+||+. .+||+|+||++.++.+|++||++.+ ++.++||.+.+ +.+++.. +.+...
T Consensus 214 ~c~gphG~S~~~GIsIGsg--------s~NVtV~Nc~~~nT~nGIRIKt~~~--gg~v~NV~I~gnis~~dvrsynir~i 283 (772)
T 3gqn_A 214 YSHDPRLTANCNGFEIDDG--------SRHVVLSNNRSKGCYGGIEIKAHGD--APAAYNISINGHMSVEDVRSYNFRHI 283 (772)
T ss_dssp EEECCSSSSSCCSEEECTT--------CEEEEEEEEEEESSSEEEEECCCTT--SCCCEEEEEEEEEEESCSEEEEECCT
T ss_pred EEECCCCCCCcccEEecCC--------cccEEEEceEEECCCcEEEEEEeCC--CCccccEEEECCEEeccCeEecceEE
Confidence 9943 479999853 3999999999999999999998764 78999999985 8777652 222221
Q ss_pred eeeCCCCCCCCCccCceEEEeEEEEeEEEEcc
Q 040962 161 QMYCPHGSCNQKITSNVQIKDVTYRNIWGTSS 192 (247)
Q Consensus 161 ~~y~~~~~~~~~~~~~~~i~nI~~~ni~~~~~ 192 (247)
..+.. . .|...+..||.++|+....+
T Consensus 284 G~h~a---~---dp~s~~a~nV~l~n~~~~~P 309 (772)
T 3gqn_A 284 GHHAA---T---APQSVSAKNIVASNLVSIRP 309 (772)
T ss_dssp TSCSS---S---SCCCSSCEEEEEEEEEEESC
T ss_pred ccccC---C---CCCCccCccEEeecceEEcc
Confidence 11111 1 12223568888888886654
No 26
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=99.88 E-value=5e-22 Score=182.00 Aligned_cols=204 Identities=14% Similarity=0.097 Sum_probs=143.4
Q ss_pred EEEccEEEEeeE---EeCCC-----C-cEEEEeceecEEEEeEEEEcCCCCC--------CCCeeeecCcccEEEEeeEE
Q 040962 5 NFVTNSRISGIT---SVNSK-----N-AHISLYGCHKVSIDNIKITAPYQSP--------NTDGIKIGDSKGIKITHSSI 67 (247)
Q Consensus 5 ~~~~nv~i~git---i~n~~-----~-~~i~~~~~~nv~i~n~~I~~~~~~~--------n~DGidi~~s~nV~I~n~~i 67 (247)
.+.+|++|.|-- +.+.. . ..+.+..|+|++|+|+++.+....+ |+||+++ .|+||+|+||+|
T Consensus 106 ~~~~nItI~G~Gg~~~iDG~G~~~~rp~~i~~~~~~Nv~I~gIti~n~w~ih~s~~V~i~NtDGi~i-~s~nV~I~n~~I 184 (464)
T 1h80_A 106 NIVRNFSFQGLGNGFLVDFKDSRDKNLAVFKLGDVRNYKISNFTIDDNKTIFASILVDVTERNGRLH-WSRNGIIERIKQ 184 (464)
T ss_dssp SCEEEEEEEECTTCEEEECTTCSCCBEEEEEECSEEEEEEEEEEEECCSCBSCSEEECEEEETTEEE-EEEEEEEEEEEE
T ss_pred cCccceEEECcCcceEEeCCCCCCCCceEEEEEeeccEEEeeeEEeccceEeeceeeeeecCCCcee-eccCEEEeceEE
Confidence 457788887763 33321 2 2467788888888888888744222 6899998 889999999999
Q ss_pred ccCCceEE--ecCCcEeEEEEeeEEcCCCeEEEEecc----ccCCCCcEEEEEEEeeEEeCCceeEEEEEecCCCCceEE
Q 040962 68 GTGDDCIA--LLSGSTNINVTDVTCGPGHGISVGSLG----RYANERNVHGLAVRNCTFRGTTNGVRIKTWASPQANVAS 141 (247)
Q Consensus 68 ~~~DD~i~--i~s~~~nV~I~nc~~~~~~gi~igs~g----~~~~~~~i~nI~v~ni~~~~~~~gi~ik~~~~~~~g~i~ 141 (247)
.++||++. ...+++||+|+||+|.+++||+|++.+ .. ..+.++||+|+||+|.++.+|+.|++. .+.++
T Consensus 185 ~~gddgiGs~~~~~~~NV~V~n~~~~gg~GIrIktg~d~IG~~-~~g~v~NI~~~Ni~~~nv~~~I~I~p~----~~~is 259 (464)
T 1h80_A 185 NNALFGYGLIQTYGADNILFRNLHSEGGIALRMETDNLLMKNY-KQGGIRNIFADNIRCSKGLAAVMFGPH----FMKNG 259 (464)
T ss_dssp ESCCTTCEEEEESEEEEEEEEEEEEESSEEEEEECCCHHHHHH-TCCEEEEEEEEEEEEESSSEEEEEECT----TCBCC
T ss_pred ecCCCeEEecccCCEeEEEEEeeEEECCCEEEEEeCCceeccC-CCCcEEEEEEEeEEEECCceeEEEeCC----CceEe
Confidence 99999875 234589999999999998899998641 11 356899999999999999999999842 36789
Q ss_pred cEEEEeEEEeCCCccEEEEeeeCCCCCCCCCccCceEEEeEEEEeEE------EEc---------cCCceEEEEec----
Q 040962 142 GFTFENIFMSNVENPIVIDQMYCPHGSCNQKITSNVQIKDVTYRNIW------GTS---------STKVAVNFQCS---- 202 (247)
Q Consensus 142 nI~f~ni~~~~~~~~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~------~~~---------~~~~~~~i~g~---- 202 (247)
||+|+||+++++..++.|++.|+.... +......+.+|+|-. ++. ....|+.|.+.
T Consensus 260 nItfeNI~~t~~~~aI~i~q~y~~~fd-----~~~~~~~~~~~~~~~e~~~~~G~~~~~~~~~ng~~~~~~~i~~~~~~~ 334 (464)
T 1h80_A 260 DVQVTNVSSVSCGSAVRSDSGFVELFS-----PTDEVHTRQSWKQAVESKLGRGCAQTPYARGNGGTRWAARVTQKDACL 334 (464)
T ss_dssp CEEEEEEEEESSSCSEEECCCCCEECC--------------------------CCBCCC----------CEEBCSCHHHH
T ss_pred EEEEEEEEEEccceeEEEecCcccccC-----ccccccccceeccccccccccCceeEEEeccCCcccCceEEcccccee
Confidence 999999999999999999988875321 112256677776554 111 00235555554
Q ss_pred ---------CCCCEEcEEEEeEEEEe
Q 040962 203 ---------KTFPCENIVLQDIYLVH 219 (247)
Q Consensus 203 ---------~~~~~~ni~~~nv~i~~ 219 (247)
+....++++++||++++
T Consensus 335 ~~~~~~~~~~~g~~~~~~~~nv~~~~ 360 (464)
T 1h80_A 335 DKAKLEYGIEPGSFGTVKVFDVTARF 360 (464)
T ss_dssp HHHHHHTCCCCCBCSSEEEEEEEEEC
T ss_pred ccccccccccCCceEEEEEEEEEecc
Confidence 55578899999999987
No 27
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=99.80 E-value=3e-19 Score=167.18 Aligned_cols=191 Identities=15% Similarity=0.183 Sum_probs=144.6
Q ss_pred CeEEEEEccEEEEeeEEeCCC------------------CcEEEEe------ceecEEEEeEEEEcCCCCCCCCeeeecC
Q 040962 1 SMVFNFVTNSRISGITSVNSK------------------NAHISLY------GCHKVSIDNIKITAPYQSPNTDGIKIGD 56 (247)
Q Consensus 1 ~i~~~~~~nv~i~giti~n~~------------------~~~i~~~------~~~nv~i~n~~I~~~~~~~n~DGidi~~ 56 (247)
+|.|.+++|++|.|--+++.. .+.+.+. +|+||+|+++++.+++. + .+++..
T Consensus 279 ~i~~~~~~nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~Giti~NSp~-w---~i~~~~ 354 (574)
T 1ogo_X 279 AIEYFTKQNFYATGHGILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVGPTINAPPF-N---TMDFNG 354 (574)
T ss_dssp CEEECCSSCEEEESSCEEECTTSCTTCBTTTTTBSCCCTTTBCCSEEECSCCSSEEEEEESCEEECCSS-C---SEEECS
T ss_pred cEEEeCceeEEEEeCEEEeCCCcccccccccccccccCCcceEEEEeccccCCceeEEEECeEEECCCC-c---EEeecC
Confidence 367889999999987666443 1345555 99999999999999753 2 499999
Q ss_pred cccE--EEEeeEEcc----CCceEEecCCcEeEEEEeeEEcCC-CeEEEEeccccCCCCcEEEEEEEeeEEeCCc-ee-E
Q 040962 57 SKGI--KITHSSIGT----GDDCIALLSGSTNINVTDVTCGPG-HGISVGSLGRYANERNVHGLAVRNCTFRGTT-NG-V 127 (247)
Q Consensus 57 s~nV--~I~n~~i~~----~DD~i~i~s~~~nV~I~nc~~~~~-~gi~igs~g~~~~~~~i~nI~v~ni~~~~~~-~g-i 127 (247)
|+|| +|+++.+.+ ..|+|.+. +||+|+||++..+ ++|+|++ +||+|+||+|+..+ ++ +
T Consensus 355 c~nV~~~I~nv~i~~~~~~nTDGIDi~---~NV~I~nc~I~~gDDcIaIks----------~NI~I~nc~i~~g~g~g~I 421 (574)
T 1ogo_X 355 NSGISSQISDYKQVGAFFFQTDGPEIY---PNSVVHDVFWHVNDDAIKIYY----------SGASVSRATIWKCHNDPII 421 (574)
T ss_dssp SSCEEEEEEEEEEECCCSTTCCCCBCC---TTCEEEEEEEEESSCSEECCS----------TTCEEEEEEEEECSSSCSE
T ss_pred CCChhhEEEeeEeeCCCCCCCccCccc---CCEEEEeeEEECCCCEEEECC----------ccEEEEeEEEECCCCCceE
Confidence 9999 999999874 27899887 7999999999986 5899974 89999999998754 45 8
Q ss_pred EEEEecCCCCceEEcEEEEeEEEeCCCcc--------EEE--EeeeCCCCCCCCCccCceEEEeEEEEeEEEEccCCceE
Q 040962 128 RIKTWASPQANVASGFTFENIFMSNVENP--------IVI--DQMYCPHGSCNQKITSNVQIKDVTYRNIWGTSSTKVAV 197 (247)
Q Consensus 128 ~ik~~~~~~~g~i~nI~f~ni~~~~~~~~--------i~i--~~~y~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~ 197 (247)
.|++ ..+.|+||+|+||+|.+.... ..+ ...|.... +...+.+ + ||+|+||++.... .++
T Consensus 422 sIGS----~~g~V~NV~v~N~~i~~~~~~~~~~~~~g~iiGs~~~y~~~~---~~~~g~g-V-NI~f~NI~~~~v~-~~i 491 (574)
T 1ogo_X 422 QMGW----TSRDISGVTIDTLNVIHTRYIKSETVVPSAIIGASPFYASGM---SPDSRKS-I-SMTVSNVVCEGLC-PSL 491 (574)
T ss_dssp ECCS----SCCCEEEEEEEEEEEEECCCSSCCTTTTCEEEEECCCSSSSC---CCEEEEE-E-EEEEEEEEECSSB-CEE
T ss_pred EEcC----CCCcEEEEEEEeEEEECCcccceeccccceeecccccccccc---ccCCCce-E-EEEEEeEEEEcee-Eee
Confidence 8876 258999999999999876431 111 11122110 0112234 8 9999999998863 343
Q ss_pred EEEecCCCCEEcEEEEeEEEEe
Q 040962 198 NFQCSKTFPCENIVLQDIYLVH 219 (247)
Q Consensus 198 ~i~g~~~~~~~ni~~~nv~i~~ 219 (247)
+...+..+++||+|+||+++.
T Consensus 492 -i~i~p~~~I~nI~~~NI~i~g 512 (574)
T 1ogo_X 492 -FRITPLQNYKNFVVKNVAFPD 512 (574)
T ss_dssp -EEECCSEEEEEEEEEEEEETT
T ss_pred -EEECCCCCEEEEEEEeEEEeC
Confidence 556777789999999999875
No 28
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=99.79 E-value=9.7e-19 Score=163.54 Aligned_cols=196 Identities=13% Similarity=0.187 Sum_probs=141.8
Q ss_pred eEEE-EEccEEEEeeEEeCCCC-------------------cEEEE------eceecEEEEeEEEEcCCCCCCCCeeee-
Q 040962 2 MVFN-FVTNSRISGITSVNSKN-------------------AHISL------YGCHKVSIDNIKITAPYQSPNTDGIKI- 54 (247)
Q Consensus 2 i~~~-~~~nv~i~giti~n~~~-------------------~~i~~------~~~~nv~i~n~~I~~~~~~~n~DGidi- 54 (247)
+.|. +++|++|.|-.+++... +.+.+ .+|+||+|+++++.+++. + .+++
T Consensus 238 ~~~~~~~~nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~~rp~~i~~~~~~~~~~c~nV~I~Giti~Nsp~-w---~i~i~ 313 (549)
T 1x0c_A 238 VEFLSTASEVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRGTLGNSSQTFVLNGVTVSAPPF-N---SMDWS 313 (549)
T ss_dssp EEECCCSSEEEEESSCEEECTTSCTTEEGGGTTEECGGGCSCCCCSEEEECCSSCEEEEEESCEEECCSS-C---SEEEE
T ss_pred EEEecCceeEEEEeeEEEECCCceecccCcccccccccCCCceEEEeeccccCCceEEEEECcEEECCCc-e---eEEee
Confidence 4555 78999999877765542 13455 999999999999999763 2 3673
Q ss_pred cCc-cc--EEEEeeEEcc----CCceEEecCCcEeEEEEeeEEcCC-CeEEEEeccccCCCCcEEEEEEEeeEEeCCc-e
Q 040962 55 GDS-KG--IKITHSSIGT----GDDCIALLSGSTNINVTDVTCGPG-HGISVGSLGRYANERNVHGLAVRNCTFRGTT-N 125 (247)
Q Consensus 55 ~~s-~n--V~I~n~~i~~----~DD~i~i~s~~~nV~I~nc~~~~~-~gi~igs~g~~~~~~~i~nI~v~ni~~~~~~-~ 125 (247)
..| ++ |+|+++.+.+ ..|+|.+. +||+|+||++..+ ++|+|+| +||+|+||+|+... +
T Consensus 314 ~~~~~ni~V~I~n~~i~~~~~~NTDGidi~---~nV~I~n~~i~~gDDcIaIks----------~NI~I~n~~~~~~~g~ 380 (549)
T 1x0c_A 314 GNSLDLITCRVDDYKQVGAFYGQTDGLEMY---PGTILQDVFYHTDDDGLKMYY----------SNVTARNIVMWKESVA 380 (549)
T ss_dssp CSCGGGEEEEEEEEEEECCCBTTCCCCBCC---TTCEEEEEEEEESSCCEECCS----------SSEEEEEEEEEECSSS
T ss_pred ccCCCCCeEEEEeeEeEcCCCCCCCccccc---CCEEEEeeEEeCCCCEEEECC----------CCEEEEeeEEEcCCCC
Confidence 466 79 9999999865 36888887 7999999999987 5899985 89999999998654 4
Q ss_pred e-EEEEEecCCCCceEEcEEEEeEEEeCCCc------cEEEEe--ee--CCCCCCCCCccCceEEEeEEEEeEEEEccCC
Q 040962 126 G-VRIKTWASPQANVASGFTFENIFMSNVEN------PIVIDQ--MY--CPHGSCNQKITSNVQIKDVTYRNIWGTSSTK 194 (247)
Q Consensus 126 g-i~ik~~~~~~~g~i~nI~f~ni~~~~~~~------~i~i~~--~y--~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~ 194 (247)
+ |.+++ ..+.|+||+|+|++|.+..+ +..|+. .| +.... + ....+.++||+|+||+++....
T Consensus 381 ~~IsiGs----~~~~V~NV~v~n~~i~~s~~~k~~~~g~iI~~~~~~~~g~~~~--~-~d~~G~i~nI~f~NI~i~nv~~ 453 (549)
T 1x0c_A 381 PVVEFGW----TPRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYAPDGL--S-SNHSTGNSNMTVRNITWSNFRA 453 (549)
T ss_dssp CSEECCB----SCCCEEEEEEEEEEEEECCCCSGGGCCCSEEECCBTTTCTTSC--C-SCCCCBEEEEEEEEEEEEEEEE
T ss_pred ceEEECC----CCCcEEEEEEEeeEEECccccccccceEEEecccccccCcccc--C-cCCCceEccEEEEeEEEEeEEE
Confidence 5 77765 25889999999999988753 222554 23 32110 0 0113578888888888655321
Q ss_pred ceEEE---EecCCCCEEcEEEEeEEEEecC
Q 040962 195 VAVNF---QCSKTFPCENIVLQDIYLVHNG 221 (247)
Q Consensus 195 ~~~~i---~g~~~~~~~ni~~~nv~i~~~~ 221 (247)
.+..+ .+.++.+++||+|+||++....
T Consensus 454 ~g~~~~~~~g~pg~~I~nI~i~NI~i~~~~ 483 (549)
T 1x0c_A 454 EGSSSALFRINPIQNLDNISIKNVSIESFE 483 (549)
T ss_dssp EEEECCSEEECCSEEEEEEEEEEEEEEEEC
T ss_pred eceEEeeecCCCCCcCccEEEEEEEEEccc
Confidence 11111 3667778999999999998765
No 29
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=99.66 E-value=1.7e-15 Score=138.81 Aligned_cols=149 Identities=17% Similarity=0.141 Sum_probs=113.9
Q ss_pred eceecEEEEeE----EEEcCCCC-CCCCeeeecCcccEEEEeeEEccC-------------CceEEecCCcEeEEEEeeE
Q 040962 28 YGCHKVSIDNI----KITAPYQS-PNTDGIKIGDSKGIKITHSSIGTG-------------DDCIALLSGSTNINVTDVT 89 (247)
Q Consensus 28 ~~~~nv~i~n~----~I~~~~~~-~n~DGidi~~s~nV~I~n~~i~~~-------------DD~i~i~s~~~nV~I~nc~ 89 (247)
...+|++|.+- .++..... ...-.+.+..|+|++|+++++.+. .|++.+ .++||+|+||+
T Consensus 106 ~~~~nItI~G~Gg~~~iDG~G~~~~rp~~i~~~~~~Nv~I~gIti~n~w~ih~s~~V~i~NtDGi~i--~s~nV~I~n~~ 183 (464)
T 1h80_A 106 NIVRNFSFQGLGNGFLVDFKDSRDKNLAVFKLGDVRNYKISNFTIDDNKTIFASILVDVTERNGRLH--WSRNGIIERIK 183 (464)
T ss_dssp SCEEEEEEEECTTCEEEECTTCSCCBEEEEEECSEEEEEEEEEEEECCSCBSCSEEECEEEETTEEE--EEEEEEEEEEE
T ss_pred cCccceEEECcCcceEEeCCCCCCCCceEEEEEeeccEEEeeeEEeccceEeeceeeeeecCCCcee--eccCEEEeceE
Confidence 56777877775 55543211 112246778999999999998652 255566 47999999999
Q ss_pred EcCCC-eEEEEeccccCCCCcEEEEEEEeeEEeCCceeEEEEEe-----cCCCCceEEcEEEEeEEEeCCCccEEEEeee
Q 040962 90 CGPGH-GISVGSLGRYANERNVHGLAVRNCTFRGTTNGVRIKTW-----ASPQANVASGFTFENIFMSNVENPIVIDQMY 163 (247)
Q Consensus 90 ~~~~~-gi~igs~g~~~~~~~i~nI~v~ni~~~~~~~gi~ik~~-----~~~~~g~i~nI~f~ni~~~~~~~~i~i~~~y 163 (247)
+..++ ++ |+. ....++||+|+||.|.+ .+|++||++ .+ ..|.++||+|+|++|+++..||.|+.
T Consensus 184 I~~gddgi--Gs~----~~~~~~NV~V~n~~~~g-g~GIrIktg~d~IG~~-~~g~v~NI~~~Ni~~~nv~~~I~I~p-- 253 (464)
T 1h80_A 184 QNNALFGY--GLI----QTYGADNILFRNLHSEG-GIALRMETDNLLMKNY-KQGGIRNIFADNIRCSKGLAAVMFGP-- 253 (464)
T ss_dssp EESCCTTC--EEE----EESEEEEEEEEEEEEES-SEEEEEECCCHHHHHH-TCCEEEEEEEEEEEEESSSEEEEEEC--
T ss_pred EecCCCeE--Eec----ccCCEeEEEEEeeEEEC-CCEEEEEeCCceeccC-CCCcEEEEEEEeEEEECCceeEEEeC--
Confidence 99875 56 322 34679999999999999 889999987 43 46899999999999999999998873
Q ss_pred CCCCCCCCCccCceEEEeEEEEeEEEEccCCceEEEE
Q 040962 164 CPHGSCNQKITSNVQIKDVTYRNIWGTSSTKVAVNFQ 200 (247)
Q Consensus 164 ~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~ 200 (247)
....++||+|+||+++.. ..++.|.
T Consensus 254 -----------~~~~isnItfeNI~~t~~-~~aI~i~ 278 (464)
T 1h80_A 254 -----------HFMKNGDVQVTNVSSVSC-GSAVRSD 278 (464)
T ss_dssp -----------TTCBCCCEEEEEEEEESS-SCSEEEC
T ss_pred -----------CCceEeEEEEEEEEEEcc-ceeEEEe
Confidence 124689999999999986 5677665
No 30
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=99.54 E-value=1.5e-13 Score=128.25 Aligned_cols=169 Identities=13% Similarity=0.166 Sum_probs=120.0
Q ss_pred EEeceecEEEEeEEEEcCCC----------CCCCCeeeecCcccEEEEeeEEcc-CCceEEecCC---------------
Q 040962 26 SLYGCHKVSIDNIKITAPYQ----------SPNTDGIKIGDSKGIKITHSSIGT-GDDCIALLSG--------------- 79 (247)
Q Consensus 26 ~~~~~~nv~i~n~~I~~~~~----------~~n~DGidi~~s~nV~I~n~~i~~-~DD~i~i~s~--------------- 79 (247)
.....+||+|++.+|+.... ......+.+..|+||+|+++++.+ +.+++.+.++
T Consensus 101 ~a~~~~NItItG~TIDGNG~~~g~~~~~~g~~RP~lI~f~~c~NV~I~gVti~NSp~~gI~I~~~~~NDGid~DGi~fd~ 180 (609)
T 3gq8_A 101 VTTGNENIFLSSFTLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCTLHGIDITCGGLDYPYLGDGTTAPN 180 (609)
T ss_dssp TTTCCEEEEEEEEEEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCSSCSEEEECSSSSCCCCCTTCCCSS
T ss_pred eecccccEEEEeeEEECCccccCcccccCCCCCccEEEEEeeceEEEEeeEEEeCCCCCeEEeCCCCCccccCCCccccc
Confidence 44578899999998886210 012235778899999999999964 4677777653
Q ss_pred -cEeEEEEeeEEc-CC-CeEEEEeccccCCCCcEEEEEEEeeEEeCC-----ceeEEEEEecCCCCceEEcEEEEeEEEe
Q 040962 80 -STNINVTDVTCG-PG-HGISVGSLGRYANERNVHGLAVRNCTFRGT-----TNGVRIKTWASPQANVASGFTFENIFMS 151 (247)
Q Consensus 80 -~~nV~I~nc~~~-~~-~gi~igs~g~~~~~~~i~nI~v~ni~~~~~-----~~gi~ik~~~~~~~g~i~nI~f~ni~~~ 151 (247)
|+||+|+||.+. .+ +||+|++ .+||+|+||+|++. .+|+.|. .+. +||+|+|+++.
T Consensus 181 ~S~NV~I~Nc~I~~tGDDcIaIks---------seNI~I~Nc~~~gp~G~S~~~GIsIG------sgs-~NVtV~Nc~i~ 244 (609)
T 3gq8_A 181 PSENIWIENCEATGFGDDGITTHH---------SQYINILNCYSHDPRLTANCNGFEID------DGS-RHVVLSNNRSK 244 (609)
T ss_dssp CCEEEEEESCEEESCSSCSEEECS---------CEEEEEESCEEECCSSCSSCCSEEEC------TTC-EEEEEESEEEE
T ss_pred cceeEEEEeeEEEecCCCEEEecC---------CeeEEEEeEEEECCCCCCCcccEEcc------CCc-ccEEEEeeEEE
Confidence 799999999994 34 6899964 59999999999765 4688874 122 99999999999
Q ss_pred CCCccEEEEeeeCCCCCCCCCccCceEEEeEEEEe-EEEEccCCceEEEEec------CCCCEEcEEEEeEEEEecC
Q 040962 152 NVENPIVIDQMYCPHGSCNQKITSNVQIKDVTYRN-IWGTSSTKVAVNFQCS------KTFPCENIVLQDIYLVHNG 221 (247)
Q Consensus 152 ~~~~~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~n-i~~~~~~~~~~~i~g~------~~~~~~ni~~~nv~i~~~~ 221 (247)
+...+++|+.. +..+.++||.|.| +.......+.+...|. ...+..||+|.|+....+.
T Consensus 245 nt~~GIrIKt~-----------~~~~~v~NV~I~n~vs~~nvrsyn~r~iG~~~a~dp~s~~a~nV~l~n~~~~~p~ 310 (609)
T 3gq8_A 245 GCYGGIEIKAH-----------GDAPAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRPN 310 (609)
T ss_dssp SSSEEEEEEEC-----------TTSCCCEEEEEEEEEEESCSEEEEEEETTSCSTTSCCCSSCEEEEEEEEEEESCC
T ss_pred CCCCEEEEEec-----------CCCCccccEEEECCEeecCceEecceEEccccCCCCCcceecceEeecceEEeec
Confidence 99999999973 1223567777666 3332221233344442 2236788999988887654
No 31
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=99.51 E-value=2.5e-13 Score=128.97 Aligned_cols=169 Identities=12% Similarity=0.150 Sum_probs=118.3
Q ss_pred EEeceecEEEEeEEEEcCCC----------CCCCCeeeecCcccEEEEeeEEcc-CCceEEecC----------------
Q 040962 26 SLYGCHKVSIDNIKITAPYQ----------SPNTDGIKIGDSKGIKITHSSIGT-GDDCIALLS---------------- 78 (247)
Q Consensus 26 ~~~~~~nv~i~n~~I~~~~~----------~~n~DGidi~~s~nV~I~n~~i~~-~DD~i~i~s---------------- 78 (247)
....++||+|++.+|+.... ....-.|.+..|+||+|+++++.+ ..+++.+.+
T Consensus 101 ~a~gveNItItG~TIDGNG~~~g~~~~~~g~~RP~lI~f~~ckNV~I~gVti~NSp~~gI~I~np~~NDGid~DGi~fdi 180 (772)
T 3gqn_A 101 VTTGNENIFLSSFTLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCTLHGIDITCGGLDYPYLGDGTTAPN 180 (772)
T ss_dssp TTTCCEEEEEEEEEEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCSSCSEEEECSSSSCCCCCTTCCCSS
T ss_pred eccCceeEEEEeeEEeCCccccCcccccCCCCCccEEEEEeeceEEEEeEEEEeCCCCCEEEeCCCcCCcCCCcCccccc
Confidence 44678999999998886211 011234778899999999999964 466777754
Q ss_pred CcEeEEEEeeEEcC-C-CeEEEEeccccCCCCcEEEEEEEeeEEeCC-----ceeEEEEEecCCCCceEEcEEEEeEEEe
Q 040962 79 GSTNINVTDVTCGP-G-HGISVGSLGRYANERNVHGLAVRNCTFRGT-----TNGVRIKTWASPQANVASGFTFENIFMS 151 (247)
Q Consensus 79 ~~~nV~I~nc~~~~-~-~gi~igs~g~~~~~~~i~nI~v~ni~~~~~-----~~gi~ik~~~~~~~g~i~nI~f~ni~~~ 151 (247)
+|+||+|+||.+.. + +||+|++ .+||+|+||+|++. .+|+.|. ++. +||+++|+++.
T Consensus 181 ~S~NV~I~Nc~I~ntGDDcIAIks---------SeNI~I~Nc~c~gphG~S~~~GIsIG------sgs-~NVtV~Nc~~~ 244 (772)
T 3gqn_A 181 PSENIWIENCEATGFGDDGITTHH---------SQYINILNCYSHDPRLTANCNGFEID------DGS-RHVVLSNNRSK 244 (772)
T ss_dssp CCEEEEEESCEEESCSSCSEEECS---------CEEEEEESCEEECCSSSSSCCSEEEC------TTC-EEEEEEEEEEE
T ss_pred ccceEEEEeeEEEecCcCeEEecC---------CceEEEEeEEEECCCCCCCcccEEec------CCc-ccEEEEceEEE
Confidence 17999999999943 4 6899964 59999999999765 4688885 122 99999999999
Q ss_pred CCCccEEEEeeeCCCCCCCCCccCceEEEeEEEEe-EEEEccCCceEEEEec-----C-CCCEEcEEEEeEEEEecC
Q 040962 152 NVENPIVIDQMYCPHGSCNQKITSNVQIKDVTYRN-IWGTSSTKVAVNFQCS-----K-TFPCENIVLQDIYLVHNG 221 (247)
Q Consensus 152 ~~~~~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~n-i~~~~~~~~~~~i~g~-----~-~~~~~ni~~~nv~i~~~~ 221 (247)
+..++++|+.. +..+.++||.+.+ +.......+.+...|. | ..+..||.|.|+......
T Consensus 245 nT~nGIRIKt~-----------~~gg~v~NV~I~gnis~~dvrsynir~iG~h~a~dp~s~~a~nV~l~n~~~~~P~ 310 (772)
T 3gqn_A 245 GCYGGIEIKAH-----------GDAPAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRPN 310 (772)
T ss_dssp SSSEEEEECCC-----------TTSCCCEEEEEEEEEEESCSEEEEECCTTSCSSSSCCCSSCEEEEEEEEEEESCC
T ss_pred CCCcEEEEEEe-----------CCCCccccEEEECCEEeccCeEecceEEccccCCCCCCccCccEEeecceEEccc
Confidence 99999999853 2234567776663 5543321122222232 1 236788888888777554
No 32
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=99.50 E-value=2.3e-14 Score=133.26 Aligned_cols=172 Identities=9% Similarity=0.013 Sum_probs=126.4
Q ss_pred eEEEEEccEEEEeeEEeCCC--C-c-----E-----EEEeceecEEEEeEEEEcC-CCCCCCCeeee---cCcccEEEEe
Q 040962 2 MVFNFVTNSRISGITSVNSK--N-A-----H-----ISLYGCHKVSIDNIKITAP-YQSPNTDGIKI---GDSKGIKITH 64 (247)
Q Consensus 2 i~~~~~~nv~i~giti~n~~--~-~-----~-----i~~~~~~nv~i~n~~I~~~-~~~~n~DGidi---~~s~nV~I~n 64 (247)
|.+.+++|++|.|--.++.. . | . +.+.+|+ |+++++.++ +. + .+++ ..|+||+|+|
T Consensus 144 I~~~~~~NItItG~GtIDGqG~~wW~~~~~~~~RP~l~f~~c~---I~GITi~NSDP~-w---~I~iG~~~~c~NVtI~n 216 (600)
T 2x6w_A 144 ASSGNLENCHIYGHGVVDFGGYEFGASSQLRNGVAFGRSYNCS---VTGITFQNGDVT-W---AITLGWNGYGSNCYVRK 216 (600)
T ss_dssp GGCCCEEEEEEESSCEEECTTCCCSSTTCCEEEEECCSEEEEE---EESCEEESCCCS-C---SEEECBTTBEEEEEEES
T ss_pred EEEecceeEEEecceeeeCCccccccccccCCCCCEEEEeeeE---EeCeEEECCCCc-c---EEEeCCCCCcccEEEeC
Confidence 34567889999885555443 1 2 1 4567787 999999997 42 2 4888 8999999999
Q ss_pred eE----Ecc--CCceEEecCCcEeEEEEeeEEcCC-CeEEE-EeccccCCCCcEEEEEEEeeEEeCCceeEEEEEecCCC
Q 040962 65 SS----IGT--GDDCIALLSGSTNINVTDVTCGPG-HGISV-GSLGRYANERNVHGLAVRNCTFRGTTNGVRIKTWASPQ 136 (247)
Q Consensus 65 ~~----i~~--~DD~i~i~s~~~nV~I~nc~~~~~-~gi~i-gs~g~~~~~~~i~nI~v~ni~~~~~~~gi~ik~~~~~~ 136 (247)
++ |.+ .-|+| |+|+||.+..+ ++|+| |+. . -.++.++ ++...+.||.|++..
T Consensus 217 vtfi~aI~sspNTDGI--------V~I~nc~I~tGDDCIAI~KSG----s---~~ni~~e--~~~~GHgGISIGSe~--- 276 (600)
T 2x6w_A 217 CRFINLVNSSVNADHS--------TVYVNCPYSGVESCYFSMSSS----F---ARNIACS--VQLHQHDTFYRGSTV--- 276 (600)
T ss_dssp CEEECCCCCSSCCCEE--------EEEECSSSEEEESCEEECCCT----T---HHHHEEE--EEECSSSEEEESCEE---
T ss_pred eEEcceEecCCCCCEE--------EEEEeeEEecCCcEEEEecCC----C---cCCeEEE--EEcCCCCcEEecccc---
Confidence 99 776 35677 99999999986 58999 874 1 1234555 566666799998754
Q ss_pred CceEEcEEEEeEEEeCCCccEEEEeeeCCCCCCCCCccCceEEEeEEEEeEEEEccCCceEEEEe----cCCCCEEcEEE
Q 040962 137 ANVASGFTFENIFMSNVENPIVIDQMYCPHGSCNQKITSNVQIKDVTYRNIWGTSSTKVAVNFQC----SKTFPCENIVL 212 (247)
Q Consensus 137 ~g~i~nI~f~ni~~~~~~~~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~~~~~~~~~~~i~g----~~~~~~~ni~~ 212 (247)
.|.|+||+++| +++.. ..+++.++||+|+||++.... .++.+.- .+..+++||+|
T Consensus 277 ~ggV~NV~V~N-rIKt~-------------------~G~GG~V~NItfeNI~m~nV~-~~I~i~q~~~~~s~~~IsnItf 335 (600)
T 2x6w_A 277 NGYCRGAYVVM-HAAEA-------------------AGAGSYAYNMQVENNIAVIYG-QFVILGSDVTATVSGHLNDVIV 335 (600)
T ss_dssp EEESEEEEEEE-CGGGC-------------------TTTCSEEEEEEEESCEEEESS-EEEEEEECBCSSCBCEEEEEEE
T ss_pred cCcEEEEEEEE-EEEee-------------------cCCCceEEEEEEEEEEEEccc-eEEEeCCCCCCCCCceEEEEEE
Confidence 58899999999 33221 123478999999999998874 6666643 23457999999
Q ss_pred EeEEEEecC
Q 040962 213 QDIYLVHNG 221 (247)
Q Consensus 213 ~nv~i~~~~ 221 (247)
+||+.+...
T Consensus 336 kNItgTsas 344 (600)
T 2x6w_A 336 SGNIVSIGE 344 (600)
T ss_dssp ESCEEEECS
T ss_pred EeEEEEecc
Confidence 999998754
No 33
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.47 E-value=1.4e-12 Score=116.65 Aligned_cols=192 Identities=10% Similarity=0.065 Sum_probs=115.2
Q ss_pred EEEccEEEEeeEEeCCCCcEEEEecee-cEEEEeEEEEcCCC-------------------CCCCCeeeecC-cccEEEE
Q 040962 5 NFVTNSRISGITSVNSKNAHISLYGCH-KVSIDNIKITAPYQ-------------------SPNTDGIKIGD-SKGIKIT 63 (247)
Q Consensus 5 ~~~~nv~i~giti~n~~~~~i~~~~~~-nv~i~n~~I~~~~~-------------------~~n~DGidi~~-s~nV~I~ 63 (247)
..|++++|+++++++++.|++++..|. ++.++|+.+..... ..+.|||++.. |++++|+
T Consensus 131 ~~~~nv~I~~~~i~n~~~~gi~~~~~~~~~~i~n~~~~~~~~dGI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~ 210 (377)
T 2pyg_A 131 GADRDVTIERVEVREMSGYGFDPHEQTINLTIRDSVAHDNGLDGFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMT 210 (377)
T ss_dssp CCEEEEEEEEEEEECCSSCSEEECSSEEEEEEESCEEESCSSCSEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEE
T ss_pred ccccceEEEeEEEEecccceEEeecccCCeEEEeEEeecCCCCceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEE
Confidence 369999999999999999999999876 68888877743210 12355666544 5566666
Q ss_pred eeEEccCCceEEec-------CCcEeEEEEeeEEcC--CCeEEEEeccccCCCCcEEEEEEEeeEEeCC-ceeEEEEEec
Q 040962 64 HSSIGTGDDCIALL-------SGSTNINVTDVTCGP--GHGISVGSLGRYANERNVHGLAVRNCTFRGT-TNGVRIKTWA 133 (247)
Q Consensus 64 n~~i~~~DD~i~i~-------s~~~nV~I~nc~~~~--~~gi~igs~g~~~~~~~i~nI~v~ni~~~~~-~~gi~ik~~~ 133 (247)
++.+...++|+++- ..++|++|+++.++. .+|+.+. .+++++|+|+++.+. ..|++|+.
T Consensus 211 nN~i~~~~~g~~~~~~g~~~~~~s~nv~i~~N~~~~n~~~Gi~~~---------~~~~v~i~~N~i~~~~~~GI~i~g-- 279 (377)
T 2pyg_A 211 NNVAYGNGSSGLVVQRGLEDLALPSNILIDGGAYYDNAREGVLLK---------MTSDITLQNADIHGNGSSGVRVYG-- 279 (377)
T ss_dssp SCEEESCSSCSEEEECCSSCCCCCEEEEEESCEEESCSSCSEEEE---------EEEEEEEESCEEESCSSCSEEEEE--
T ss_pred CCEEECccCceEEEeccccCCCCCccEEEECCEEEcCccCceEec---------cccCeEEECCEEECCCCceEEEec--
Confidence 66665555555551 235566666665554 2455543 257777777777776 56777752
Q ss_pred CCCCceEEcEEEEeEEEeCCCc----cEEEEeeeCCCCCCCCCccCceE--EEeEEEEeEEEEccC--CceEEEEecCCC
Q 040962 134 SPQANVASGFTFENIFMSNVEN----PIVIDQMYCPHGSCNQKITSNVQ--IKDVTYRNIWGTSST--KVAVNFQCSKTF 205 (247)
Q Consensus 134 ~~~~g~i~nI~f~ni~~~~~~~----~i~i~~~y~~~~~~~~~~~~~~~--i~nI~~~ni~~~~~~--~~~~~i~g~~~~ 205 (247)
.++++|+|.++.+... +..+.+.|..... ..... -+++++++.+++... ...+.+.+ .
T Consensus 280 ------~~~~~i~~N~i~~n~~~~~~~~v~~~~~~~~~~-----~~~~~~~~~~~~i~~N~i~g~~~~~~~i~~~~---~ 345 (377)
T 2pyg_A 280 ------AQDVQILDNQIHDNAQAAAVPEVLLQSFDDTAG-----ASGTYYTTLNTRIEGNTISGSANSTYGIQERN---D 345 (377)
T ss_dssp ------EEEEEEESCEEESCCSSSSCCSEEEECEEETTS-----SSCEEECCBCCEEESCEEECCSSCCEEEEECS---S
T ss_pred ------CCCcEEECcEEECCcccccccceEEEEecCCCc-----cceeeeeccCeEEECCEEECcCCCccceEEcc---C
Confidence 5777888888776532 2222223332110 00011 145666666655532 34455543 4
Q ss_pred CEEcEEEEeEEEEecC
Q 040962 206 PCENIVLQDIYLVHNG 221 (247)
Q Consensus 206 ~~~ni~~~nv~i~~~~ 221 (247)
..+++++++..+....
T Consensus 346 ~~~~~~i~~n~i~~~~ 361 (377)
T 2pyg_A 346 GTDYSSLIDNDIAGVQ 361 (377)
T ss_dssp SCBCCEEESCEEESSS
T ss_pred CCccEEEECcEEeCCc
Confidence 5677888888887553
No 34
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=99.47 E-value=7.2e-14 Score=124.57 Aligned_cols=122 Identities=12% Similarity=0.185 Sum_probs=92.5
Q ss_pred EEEEccEEEEeeEE--eCCCCcEEEEeceecEEEE-eEEEEcCCCCCCCCeeeecCcccEEEEeeEEccCCceEEecCC-
Q 040962 4 FNFVTNSRISGITS--VNSKNAHISLYGCHKVSID-NIKITAPYQSPNTDGIKIGDSKGIKITHSSIGTGDDCIALLSG- 79 (247)
Q Consensus 4 ~~~~~nv~i~giti--~n~~~~~i~~~~~~nv~i~-n~~I~~~~~~~n~DGidi~~s~nV~I~n~~i~~~DD~i~i~s~- 79 (247)
...|++|.|+++++ .+++.|++|+..|++++++ ++++. .+|+||+|.+|+|..|||||++|+|
T Consensus 175 ~~~fdnV~Vn~Vt~~v~~Sg~WTIhPi~Cqnvt~r~gL~f~-------------eSCrNV~IsnC~FsVGDdciaiksGk 241 (514)
T 2vbk_A 175 GWVFDNVMVNEVETAYLMQGLWHSKFIACQAGTCRVGLHFL-------------GQCVSVSVSSCHFSRGNYSADESFGI 241 (514)
T ss_dssp SEEEESCEEEEEEEEEEEESEEEEEEESCEEEEEEEEEEEE-------------SCCEEEEEESCEEECTTSCCTTCEEE
T ss_pred eEEeeeEEEEeEEEeEeccCcEEEeEeccCceecccCcccc-------------CCCCeEEEeccEEecCcceeeeecCc
Confidence 34689999999965 5789999999999999988 66653 3899999999999999999999996
Q ss_pred ----------cEeEEEEeeEEcCCCe-EEEEeccccCCCCcEEE-EEEEeeEEeCCceeEEEEEecCCCCceEEc----E
Q 040962 80 ----------STNINVTDVTCGPGHG-ISVGSLGRYANERNVHG-LAVRNCTFRGTTNGVRIKTWASPQANVASG----F 143 (247)
Q Consensus 80 ----------~~nV~I~nc~~~~~~g-i~igs~g~~~~~~~i~n-I~v~ni~~~~~~~gi~ik~~~~~~~g~i~n----I 143 (247)
++||. || +.||||. +.++++| |++++|.|.++. -+.+.- -|..+-.|+| .
T Consensus 242 ~~~~~~~~~~se~~~---------hgav~igSE~---m~~Gvk~~v~v~~Clf~~td-~~~~~~-~~~~~~~~~~~~~~~ 307 (514)
T 2vbk_A 242 RIQPQTYAWSSEAVR---------SEAIILDSET---MCIGFKNAVYVHDCLDLHME-QLDLDY-CGSTGVVIENVNGGF 307 (514)
T ss_dssp EEECBCCTTTSSCBC---------CEEEEEESSE---EEESCSEEEEESCCEEEEEE-SEEEEE-ESSEEEEESCCEEEE
T ss_pred eecccccCCcchhcc---------cccEEECchh---hcccccccEEEEeeeccCCc-cccccc-cCCcceEEEeccCce
Confidence 56665 75 9999984 5678999 999999999875 233332 1211122333 3
Q ss_pred EEEeEEEeC
Q 040962 144 TFENIFMSN 152 (247)
Q Consensus 144 ~f~ni~~~~ 152 (247)
.|+|-.+..
T Consensus 308 ~~~~~~~~~ 316 (514)
T 2vbk_A 308 SFSNSWIAA 316 (514)
T ss_dssp EEEEEEEEE
T ss_pred eeccceEEe
Confidence 677776653
No 35
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.35 E-value=8.1e-11 Score=105.08 Aligned_cols=135 Identities=10% Similarity=0.086 Sum_probs=95.8
Q ss_pred EEeeEEeCCCCcEEEEecee--cEEEE----eEEEEcCCC-CCCCCeeeecCcccEEEEee-EEccCCceEEecCCcEeE
Q 040962 12 ISGITSVNSKNAHISLYGCH--KVSID----NIKITAPYQ-SPNTDGIKIGDSKGIKITHS-SIGTGDDCIALLSGSTNI 83 (247)
Q Consensus 12 i~giti~n~~~~~i~~~~~~--nv~i~----n~~I~~~~~-~~n~DGidi~~s~nV~I~n~-~i~~~DD~i~i~s~~~nV 83 (247)
.++++|.+ +.+.++. .+.+. ++.+.+... ....|||.+..|++++|+++ .+...+|+|.+..+++++
T Consensus 133 ~~nv~I~~-----~~i~n~~~~gi~~~~~~~~~~i~n~~~~~~~~dGI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v 207 (377)
T 2pyg_A 133 DRDVTIER-----VEVREMSGYGFDPHEQTINLTIRDSVAHDNGLDGFVADYLVDSVFENNVAYANDRHGFNVVTSTHDF 207 (377)
T ss_dssp EEEEEEEE-----EEEECCSSCSEEECSSEEEEEEESCEEESCSSCSEEEESEEEEEEESCEEESCSSCSEEEETTCEEE
T ss_pred ccceEEEe-----EEEEecccceEEeecccCCeEEEeEEeecCCCCceeEeccCCcEEECcEEEccccCcEEEEeccCCe
Confidence 34555543 4454443 35543 455555431 26789999999999999999 567778999988878999
Q ss_pred EEEeeEEcCC-CeEEEEeccccCCCCcEEEEEEEeeEEeCC-ceeEEEEEecCCCCceEEcEEEEeEEEeCC-CccEEEE
Q 040962 84 NVTDVTCGPG-HGISVGSLGRYANERNVHGLAVRNCTFRGT-TNGVRIKTWASPQANVASGFTFENIFMSNV-ENPIVID 160 (247)
Q Consensus 84 ~I~nc~~~~~-~gi~igs~g~~~~~~~i~nI~v~ni~~~~~-~~gi~ik~~~~~~~g~i~nI~f~ni~~~~~-~~~i~i~ 160 (247)
+|+|+++... +|+.+...+.. .....++++|++.++++. ..|+.++. +++++++|.++.+. ..+|+++
T Consensus 208 ~I~nN~i~~~~~g~~~~~~g~~-~~~~s~nv~i~~N~~~~n~~~Gi~~~~--------~~~v~i~~N~i~~~~~~GI~i~ 278 (377)
T 2pyg_A 208 VMTNNVAYGNGSSGLVVQRGLE-DLALPSNILIDGGAYYDNAREGVLLKM--------TSDITLQNADIHGNGSSGVRVY 278 (377)
T ss_dssp EEESCEEESCSSCSEEEECCSS-CCCCCEEEEEESCEEESCSSCSEEEEE--------EEEEEEESCEEESCSSCSEEEE
T ss_pred EEECCEEECccCceEEEecccc-CCCCCccEEEECCEEEcCccCceEecc--------ccCeEEECCEEECCCCceEEEe
Confidence 9999999864 46555222211 234578999999998874 56777643 57899999999887 6788885
No 36
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=98.57 E-value=3.6e-06 Score=80.23 Aligned_cols=168 Identities=14% Similarity=0.146 Sum_probs=115.3
Q ss_pred EEEEccEEEEeeEEeCCCCcEEEEeceecEEEEeEEEEcCCCCC-CCCeeeecCcccEEEEeeEEccCCceEEecCCcEe
Q 040962 4 FNFVTNSRISGITSVNSKNAHISLYGCHKVSIDNIKITAPYQSP-NTDGIKIGDSKGIKITHSSIGTGDDCIALLSGSTN 82 (247)
Q Consensus 4 ~~~~~nv~i~giti~n~~~~~i~~~~~~nv~i~n~~I~~~~~~~-n~DGidi~~s~nV~I~n~~i~~~DD~i~i~s~~~n 82 (247)
+..++|+.|+ ++-.+++.++||...|++..++||.|..+.... ..+||++.......|+|+.|..|+=++.++. +.
T Consensus 156 ~r~irNlviD-~t~~~~~~~gIhw~vaQatsL~Nv~i~m~~~sg~~~~GI~~e~GSgg~i~Dl~f~GG~~G~~~gn--QQ 232 (758)
T 3eqn_A 156 FRSVRNFVID-LRQVSGSATGIHWQVSQATSLINIVFQMSTAAGNQHQGIFMENGSGGFLGDLVFNGGNIGATFGN--QQ 232 (758)
T ss_dssp CEEEEEEEEE-CTTCSSCEEEEECCCCSSEEEEEEEEECCCSTTCCEEEEEECSCCCCEEEEEEEESCSEEEEEEC--SC
T ss_pred eeeecceEEe-ccccCCCceEEEEEecCceEEEEEEEEecCCCCCcceeEEecCCCceEEEeeEEeCCceEEEcCC--cc
Confidence 4567888887 777777889999999999999999999987543 3889999987899999999999987877754 56
Q ss_pred EEEEeeEEcCCC-eEEEEeccccCCCCcEEEEEEEeeEEeCCceeEEEEEecCC--CCceEEcEEEEeEEEeCCCccEEE
Q 040962 83 INVTDVTCGPGH-GISVGSLGRYANERNVHGLAVRNCTFRGTTNGVRIKTWASP--QANVASGFTFENIFMSNVENPIVI 159 (247)
Q Consensus 83 V~I~nc~~~~~~-gi~igs~g~~~~~~~i~nI~v~ni~~~~~~~gi~ik~~~~~--~~g~i~nI~f~ni~~~~~~~~i~i 159 (247)
.+++|.+|.... ||.+...+ ..++.+++|.+...||.+...... ....+--|.+-|-+++++. +.|
T Consensus 233 fT~rnltF~~~~taI~~~w~w---------gwt~~~~~i~nc~vGi~~~~g~~~~~~~q~vGsv~l~Ds~~~n~~--~~i 301 (758)
T 3eqn_A 233 FTVRNLTFNNANTAINAIWNW---------GWTFQRITINNCQVGFDLTQGGTSNTGAQGVGAEAIIDAVVTNTQ--TFV 301 (758)
T ss_dssp CEEEEEEEESCSEEEEEEEBS---------CEEEEEEEEESCSEEEEECCCCSSTTSCCCBCEEEEEEEEEESCS--EEE
T ss_pred eEEeccEEeChHHHHhhhcCc---------eEEEEEeEEECCCccEEEcCCCCCcccCcceeeEEEEEeeEEccc--ceE
Confidence 677777776653 66664321 134444444444557777542110 1234667888899999875 444
Q ss_pred EeeeCCCCCCCCCccCceEEEeEEEEeEEE
Q 040962 160 DQMYCPHGSCNQKITSNVQIKDVTYRNIWG 189 (247)
Q Consensus 160 ~~~y~~~~~~~~~~~~~~~i~nI~~~ni~~ 189 (247)
...+.... ...+...++||.++|+..
T Consensus 302 ~t~~~~~~----~~~~slvleNv~~~nv~~ 327 (758)
T 3eqn_A 302 RWSGASSG----HLQGSLVLNNIQLTNVPV 327 (758)
T ss_dssp EESSCCCS----SCSSEEEEEEEEEEEEEE
T ss_pred EeccCCCC----CCcceEEEEeEEeeCCCe
Confidence 44332211 012346788888888754
No 37
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=98.57 E-value=1.4e-06 Score=77.12 Aligned_cols=114 Identities=19% Similarity=0.329 Sum_probs=83.5
Q ss_pred EccEEEEee----EEeCCCCcEEEEeceecEEEEeEEEEcCCC-----------CCCCCeeeecCcccEEEEeeEEccC-
Q 040962 7 VTNSRISGI----TSVNSKNAHISLYGCHKVSIDNIKITAPYQ-----------SPNTDGIKIGDSKGIKITHSSIGTG- 70 (247)
Q Consensus 7 ~~nv~i~gi----ti~n~~~~~i~~~~~~nv~i~n~~I~~~~~-----------~~n~DGidi~~s~nV~I~n~~i~~~- 70 (247)
-.|.+|.|. .|. ..+|.+..++||.|+||+|....+ ..+.|+|.+.+++||.|++|.+..+
T Consensus 79 ~sn~TI~G~G~~~~i~---g~gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~~s~nVWIDH~s~s~~~ 155 (355)
T 1pcl_A 79 PSNTTIIGVGSNGKFT---NGSLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTISDGS 155 (355)
T ss_pred CCCeEEEEecCCeEEe---cCEEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEecCCCcEEEEeeEEeccc
Confidence 456777663 343 247888899999999999997531 1347899999999999999999864
Q ss_pred -----------------CceEEecCCcEeEEEEeeEEcCCC-eEEEEeccccC-CCCcEEEEEEEeeEEeCC
Q 040962 71 -----------------DDCIALLSGSTNINVTDVTCGPGH-GISVGSLGRYA-NERNVHGLAVRNCTFRGT 123 (247)
Q Consensus 71 -----------------DD~i~i~s~~~nV~I~nc~~~~~~-gi~igs~g~~~-~~~~i~nI~v~ni~~~~~ 123 (247)
|..+.++.++++|+|++|.|...+ +.-+|+.-.+. ......+|+|.+..+.+.
T Consensus 156 ~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~ 227 (355)
T 1pcl_A 156 FTDDKYTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRV 227 (355)
T ss_pred cCccccccccCccccccccceeeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccccCcceEEEECcEEeCC
Confidence 666778878999999999998643 56666541110 001234799999988764
No 38
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.44 E-value=1.1e-06 Score=77.56 Aligned_cols=100 Identities=16% Similarity=0.223 Sum_probs=77.3
Q ss_pred CcEEEEeceecEEEEeEEEEcCC------------------CCCCCCeeeecCcccEEEEeeEEccCCceE-EecCCcEe
Q 040962 22 NAHISLYGCHKVSIDNIKITAPY------------------QSPNTDGIKIGDSKGIKITHSSIGTGDDCI-ALLSGSTN 82 (247)
Q Consensus 22 ~~~i~~~~~~nv~i~n~~I~~~~------------------~~~n~DGidi~~s~nV~I~n~~i~~~DD~i-~i~s~~~n 82 (247)
.+++.+..++||.|+|++|.... .....|||.+.+++||.|++|.+....|++ .++.++++
T Consensus 105 G~gi~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~~s~nVwIDHcs~s~~~Dg~id~~~~s~~ 184 (346)
T 1pxz_A 105 GPCLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTLGSTG 184 (346)
T ss_dssp SCCEEEESCEEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEESCEEEEEESCEEECCSSEEEEEESSCEE
T ss_pred cceEEEEccCCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEecCceEEEEeeEEecCCCCcEeeccCcce
Confidence 36888889999999999998642 125689999999999999999999887776 67667999
Q ss_pred EEEEeeEEcCC-CeEEEEeccccCCCCcEEEEEEEeeEE-eC
Q 040962 83 INVTDVTCGPG-HGISVGSLGRYANERNVHGLAVRNCTF-RG 122 (247)
Q Consensus 83 V~I~nc~~~~~-~gi~igs~g~~~~~~~i~nI~v~ni~~-~~ 122 (247)
|+|++|.|..- .++-+|+..... .....+|+|.+..+ .+
T Consensus 185 vTISnn~f~~H~k~~l~G~sd~~~-~d~~~~vT~~~N~f~~~ 225 (346)
T 1pxz_A 185 ITISNNHFFNHHKVMLLGHDDTYD-DDKSMKVTVAFNQFGPN 225 (346)
T ss_dssp EEEESCEEESEEEEEEESCCSSCG-GGGGCEEEEESCEECSS
T ss_pred EEEEeeEEecCCceeEECCCCccc-cCCceEEEEEeeEEeCC
Confidence 99999999864 367777642111 11235888888888 54
No 39
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=98.42 E-value=9.7e-07 Score=79.61 Aligned_cols=114 Identities=18% Similarity=0.263 Sum_probs=83.1
Q ss_pred EccEEEEee----EEeCCCCcEEEEeceecEEEEeEEEEcCCC---------------CCCCCeeeecCcccEEEEeeEE
Q 040962 7 VTNSRISGI----TSVNSKNAHISLYGCHKVSIDNIKITAPYQ---------------SPNTDGIKIGDSKGIKITHSSI 67 (247)
Q Consensus 7 ~~nv~i~gi----ti~n~~~~~i~~~~~~nv~i~n~~I~~~~~---------------~~n~DGidi~~s~nV~I~n~~i 67 (247)
-.|.+|.|+ .|. ..+|.+..++||.|+||+|....+ ..+.|+|.+.+++||.|++|.+
T Consensus 131 ~snkTI~G~G~~~~i~---g~gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~ 207 (416)
T 1vbl_A 131 GSNTSIIGVGKDAKIK---GGGFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTF 207 (416)
T ss_dssp CSSEEEEECTTCCEEE---SCEEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEE
T ss_pred CCCeeEEecCCCeEEe---cCEEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEE
Confidence 456777664 443 357888899999999999987532 1356999999999999999999
Q ss_pred ccC------------------CceEEecCCcEeEEEEeeEEcCCC-eEEEEeccccCCCCcEEEEEEEeeEEeCC
Q 040962 68 GTG------------------DDCIALLSGSTNINVTDVTCGPGH-GISVGSLGRYANERNVHGLAVRNCTFRGT 123 (247)
Q Consensus 68 ~~~------------------DD~i~i~s~~~nV~I~nc~~~~~~-gi~igs~g~~~~~~~i~nI~v~ni~~~~~ 123 (247)
..+ |..+.++.++++|+|++|.|...+ ++-+|+.-.+........|+|.+..+.+.
T Consensus 208 s~~~~~d~~~~~~~Gr~~~~~DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f~~~ 282 (416)
T 1vbl_A 208 TDGDHPDRSLGTYFGRPFQQHDGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYYKNV 282 (416)
T ss_dssp ECTTCCGGGSCEETTEECCCCCCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEEEEE
T ss_pred ecCCCcccccccccCcceeecccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEecCC
Confidence 864 777889888999999999998643 55566541110001234688888888653
No 40
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=98.39 E-value=8.7e-07 Score=78.38 Aligned_cols=111 Identities=15% Similarity=0.172 Sum_probs=80.3
Q ss_pred ccEEEEeeEEeCCCCcEEEEeceecEEEEeEEEEcCCC-CCCCCeeeecCcccEEEEeeEEccC--------------Cc
Q 040962 8 TNSRISGITSVNSKNAHISLYGCHKVSIDNIKITAPYQ-SPNTDGIKIGDSKGIKITHSSIGTG--------------DD 72 (247)
Q Consensus 8 ~nv~i~giti~n~~~~~i~~~~~~nv~i~n~~I~~~~~-~~n~DGidi~~s~nV~I~n~~i~~~--------------DD 72 (247)
.+++|-|.+- -.+..+|.+..++||.|+|++|...+. ..+.|+|.+.+++||.|++|.+..+ |.
T Consensus 89 sn~TI~G~~~-~~~g~gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DG 167 (353)
T 1air_A 89 KGITIIGANG-SSANFGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFES 167 (353)
T ss_dssp SCEEEEECTT-CCBSSEEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCC
T ss_pred CCEEEEeccC-CCCCceEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCccccccccccccccc
Confidence 4555555421 112468999999999999999997532 2467999999999999999999743 55
Q ss_pred eEEecCCcEeEEEEeeEEcCCC-eEEEEeccccCCCCcEEEEEEEeeEEeCC
Q 040962 73 CIALLSGSTNINVTDVTCGPGH-GISVGSLGRYANERNVHGLAVRNCTFRGT 123 (247)
Q Consensus 73 ~i~i~s~~~nV~I~nc~~~~~~-gi~igs~g~~~~~~~i~nI~v~ni~~~~~ 123 (247)
.+.++.++++|+|++|.|...+ +.-+|+.-. ..+ .+|+|.+..+.+.
T Consensus 168 l~di~~~s~~VTISnn~f~~h~k~~LiG~sd~--~~g--~~vT~hhN~f~~~ 215 (353)
T 1air_A 168 AVDIKGASNTVTVSYNYIHGVKKVGLDGSSSS--DTG--RNITYHHNYYNDV 215 (353)
T ss_dssp SEEEESSCCEEEEESCEEEEEEECCEESSSTT--CCC--CEEEEESCEEEEE
T ss_pred ceeeecccCcEEEEeeEEcCCCceeEECCCcC--CCC--ceEEEEceEEcCC
Confidence 7788878999999999998643 344555311 112 6888888888653
No 41
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=98.32 E-value=3.6e-06 Score=73.53 Aligned_cols=97 Identities=19% Similarity=0.213 Sum_probs=74.8
Q ss_pred cEEEEeceecEEEEeEEEEcCCCCCCCCeeeecC-cccEEEEeeEEcc----------CCceEEecCCcEeEEEEeeEEc
Q 040962 23 AHISLYGCHKVSIDNIKITAPYQSPNTDGIKIGD-SKGIKITHSSIGT----------GDDCIALLSGSTNINVTDVTCG 91 (247)
Q Consensus 23 ~~i~~~~~~nv~i~n~~I~~~~~~~n~DGidi~~-s~nV~I~n~~i~~----------~DD~i~i~s~~~nV~I~nc~~~ 91 (247)
++|.+..++||.|+|++|.... ....|+|.+.+ ++||.|++|.+.. .|..+.++.++++|+|++|.|.
T Consensus 95 ~gl~i~~a~NVIIrNl~i~~~~-~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~ 173 (326)
T 3vmv_A 95 IGIRLSNAHNIIIQNVSIHHVR-EGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFE 173 (326)
T ss_dssp CCEEEESEEEEEEESCEEECCC-STTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEE
T ss_pred cEEEEEecceEEEECeEEEcCC-CCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEe
Confidence 5788889999999999999864 35689999996 9999999999963 3678899988999999999998
Q ss_pred CC-CeEEEEeccccCCCCcEEEEEEEeeEEeC
Q 040962 92 PG-HGISVGSLGRYANERNVHGLAVRNCTFRG 122 (247)
Q Consensus 92 ~~-~gi~igs~g~~~~~~~i~nI~v~ni~~~~ 122 (247)
.- .+.-+|+.-... ..-.+|+|.+..+.+
T Consensus 174 ~h~k~~LiG~sd~~~--~~~~~vT~~~N~f~~ 203 (326)
T 3vmv_A 174 NHWKTMLVGHTDNAS--LAPDKITYHHNYFNN 203 (326)
T ss_dssp EEEECEEECSSSCGG--GCCEEEEEESCEEEE
T ss_pred cCceEEEECCCCCCc--ccCccEEEEeeEecC
Confidence 53 256666531110 012478888877765
No 42
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=98.32 E-value=2.1e-06 Score=77.07 Aligned_cols=113 Identities=19% Similarity=0.277 Sum_probs=81.9
Q ss_pred EccEEEEee----EEeCCCCcEEEEeceecEEEEeEEEEcCCC---------------CCCCCeeeecCcccEEEEeeEE
Q 040962 7 VTNSRISGI----TSVNSKNAHISLYGCHKVSIDNIKITAPYQ---------------SPNTDGIKIGDSKGIKITHSSI 67 (247)
Q Consensus 7 ~~nv~i~gi----ti~n~~~~~i~~~~~~nv~i~n~~I~~~~~---------------~~n~DGidi~~s~nV~I~n~~i 67 (247)
-.|.+|.|. .|. ..+|.+.. +||.|+||+|....+ ..+.|+|.+.+++||.|++|.+
T Consensus 126 ~snkTI~G~G~~~~i~---g~gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~ 201 (399)
T 2o04_A 126 PANTTIVGSGTNAKVV---GGNFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTF 201 (399)
T ss_dssp CSSEEEEESSSCCEEE---SCEEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEE
T ss_pred CCCceEEeccCCeEEe---eCEEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeee
Confidence 456777664 444 35788888 999999999987532 1356999999999999999999
Q ss_pred ccC------------------CceEEecCCcEeEEEEeeEEcCCC-eEEEEeccccCCCCcEEEEEEEeeEEeCC
Q 040962 68 GTG------------------DDCIALLSGSTNINVTDVTCGPGH-GISVGSLGRYANERNVHGLAVRNCTFRGT 123 (247)
Q Consensus 68 ~~~------------------DD~i~i~s~~~nV~I~nc~~~~~~-gi~igs~g~~~~~~~i~nI~v~ni~~~~~ 123 (247)
..+ |..+.++.++++|+|++|.|..-+ +.-||+.-.+.......+|+|.+..+.+.
T Consensus 202 s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f~~~ 276 (399)
T 2o04_A 202 NDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNI 276 (399)
T ss_dssp ECTTCCGGGSCEETTEECCCCCCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEESCEEEEE
T ss_pred ecCCCccccccccccceeeccccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEECcEecCC
Confidence 864 777889888999999999998533 55566531110001234788888887653
No 43
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.31 E-value=6.8e-06 Score=72.14 Aligned_cols=117 Identities=21% Similarity=0.245 Sum_probs=84.1
Q ss_pred EccEEEEeeEEeCCCCcEEEEeceecEEEEeEEEEcCCC--CC-----CCCeeeecCcccEEEEeeEEccC-CceEEecC
Q 040962 7 VTNSRISGITSVNSKNAHISLYGCHKVSIDNIKITAPYQ--SP-----NTDGIKIGDSKGIKITHSSIGTG-DDCIALLS 78 (247)
Q Consensus 7 ~~nv~i~giti~n~~~~~i~~~~~~nv~i~n~~I~~~~~--~~-----n~DGidi~~s~nV~I~n~~i~~~-DD~i~i~s 78 (247)
-.+.+|.|.+-.-=...+|.+..++||.|+|++|..... .+ ..|+|.+..++||.|++|.+... |..+.++.
T Consensus 67 ~snkTI~G~ga~~I~G~Gi~I~~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~Dg~idi~~ 146 (340)
T 3zsc_A 67 LSDKTIVGINDAKIVGGGLVIKDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVENSHHIWIDHITFVNGNDGAVDIKK 146 (340)
T ss_dssp CSSEEEEEEEEEEEEEEEEEEESCEEEEEESCEEECCCCTTCTTSCSSCCCSEEEESCEEEEEESCEEESCSSCSEEEET
T ss_pred cCCCEEEeccCcEEecCceEEEcCceEEEeCeEEECCccccCccCCcCCCCeEEEecCCcEEEEeeeeccCCccceEEec
Confidence 356666665422001457888899999999999998531 12 68999999999999999999876 55689987
Q ss_pred CcEeEEEEeeEEcCCC-eEEEEeccccC--CCCcEEEEEEEeeEEeCC
Q 040962 79 GSTNINVTDVTCGPGH-GISVGSLGRYA--NERNVHGLAVRNCTFRGT 123 (247)
Q Consensus 79 ~~~nV~I~nc~~~~~~-gi~igs~g~~~--~~~~i~nI~v~ni~~~~~ 123 (247)
++++|+|++|.|.... +.-+|+.-... ....-.+|+|.+..+.+.
T Consensus 147 ~s~~vTISnn~f~~h~k~~LiG~sd~~~~~~d~g~~~vT~hhN~f~~~ 194 (340)
T 3zsc_A 147 YSNYITVSWNKFVDHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYFKNL 194 (340)
T ss_dssp TCEEEEEESCEEESCSBCCEECCCTTSCHHHHHHSCEEEEESCEEESC
T ss_pred CCceEEEECcEeccCceeeEeCcCCCCccccccCCcEEEEECeEecCC
Confidence 8999999999998643 56666531000 000124799999988764
No 44
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=98.28 E-value=3.5e-06 Score=73.96 Aligned_cols=101 Identities=17% Similarity=0.182 Sum_probs=74.9
Q ss_pred CcEEEEe-ceecEEEEeEEEEcCCCCCCCCeeeec-----CcccEEEEeeEEccC------------CceEEecCCcEeE
Q 040962 22 NAHISLY-GCHKVSIDNIKITAPYQSPNTDGIKIG-----DSKGIKITHSSIGTG------------DDCIALLSGSTNI 83 (247)
Q Consensus 22 ~~~i~~~-~~~nv~i~n~~I~~~~~~~n~DGidi~-----~s~nV~I~n~~i~~~------------DD~i~i~s~~~nV 83 (247)
.++|.+. .++||.|+|++|......+..|+|.+. .++||.|++|.+..+ |..+.++.++++|
T Consensus 85 g~gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~V 164 (330)
T 2qy1_A 85 NFGIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHV 164 (330)
T ss_dssp SSEEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEE
T ss_pred eeeEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceE
Confidence 4689998 899999999999985422367999998 599999999999632 6677888889999
Q ss_pred EEEeeEEcCCC-eEEEEeccccCCCCcEEEEEEEeeEEeCC
Q 040962 84 NVTDVTCGPGH-GISVGSLGRYANERNVHGLAVRNCTFRGT 123 (247)
Q Consensus 84 ~I~nc~~~~~~-gi~igs~g~~~~~~~i~nI~v~ni~~~~~ 123 (247)
+|++|.|..-+ ++-+|+.-.... ....+|+|.+..+.+.
T Consensus 165 TISnn~f~~h~k~~L~G~sd~~~~-~~~~~vT~h~N~f~~~ 204 (330)
T 2qy1_A 165 TVSYNYVYNYQKVALNGYSDSDTK-NSAARTTYHHNRFENV 204 (330)
T ss_dssp EEESCEEEEEEECCEESSSTTCGG-GGGCEEEEESCEEEEE
T ss_pred EEEcceeccCCeEEEECCCCcccc-CCCceEEEECcEEcCC
Confidence 99999997533 455665311110 1125788888888653
No 45
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=98.22 E-value=9.2e-06 Score=71.97 Aligned_cols=114 Identities=18% Similarity=0.354 Sum_probs=82.2
Q ss_pred EccEEEEee----EEeCCCCcEEEE---eceecEEEEeEEEEcCCCC-----------CCCCeeeecC-cccEEEEeeEE
Q 040962 7 VTNSRISGI----TSVNSKNAHISL---YGCHKVSIDNIKITAPYQS-----------PNTDGIKIGD-SKGIKITHSSI 67 (247)
Q Consensus 7 ~~nv~i~gi----ti~n~~~~~i~~---~~~~nv~i~n~~I~~~~~~-----------~n~DGidi~~-s~nV~I~n~~i 67 (247)
-.|.+|.|. .|. .++|.+ ..++||.|+||+|....+. .+.|+|.+.. ++||.|++|.+
T Consensus 86 ~snkTI~G~G~~~~i~---g~gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~ 162 (361)
T 1pe9_A 86 PANTTVIGLGTDAKFI---NGSLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTI 162 (361)
T ss_dssp CSSEEEEECTTCCEEE---SSEEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEE
T ss_pred cCCcEEEccCCCeEEe---cCEEEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEe
Confidence 467777664 444 367899 6899999999999975321 2478999998 99999999999
Q ss_pred ccC------------------CceEEecCCcEeEEEEeeEEcCCC-eEEEEeccccC-CCCcEEEEEEEeeEEeCC
Q 040962 68 GTG------------------DDCIALLSGSTNINVTDVTCGPGH-GISVGSLGRYA-NERNVHGLAVRNCTFRGT 123 (247)
Q Consensus 68 ~~~------------------DD~i~i~s~~~nV~I~nc~~~~~~-gi~igs~g~~~-~~~~i~nI~v~ni~~~~~ 123 (247)
..+ |..+.++.++++|+|++|.|..-. ++=+|+.-.+. ....--.|+|.+..+.+.
T Consensus 163 s~~~~~~~~~~~~~G~~~~~~DgllDi~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~ 238 (361)
T 1pe9_A 163 SDGNFTDDMYTTKDGETYVQHDGALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRV 238 (361)
T ss_dssp ECTTSCGGGCCEETTEECCCCCCSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESCEEEEE
T ss_pred ecccccccccccccCcceeeccceeeeecCCCcEEEEeeEEcCCCceeEecCCCCCcccccCcceEEEECeEEcCc
Confidence 863 778899988999999999998532 45555431100 000134788888888653
No 46
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=98.10 E-value=9.3e-05 Score=70.63 Aligned_cols=136 Identities=18% Similarity=0.179 Sum_probs=92.1
Q ss_pred cEEEEeEEEEcCCCCCCCCeeeecCcccEEEEeeEEccC------CceEEecCCcEeEEEEeeEEcCCC-eEEEEecccc
Q 040962 32 KVSIDNIKITAPYQSPNTDGIKIGDSKGIKITHSSIGTG------DDCIALLSGSTNINVTDVTCGPGH-GISVGSLGRY 104 (247)
Q Consensus 32 nv~i~n~~I~~~~~~~n~DGidi~~s~nV~I~n~~i~~~------DD~i~i~s~~~nV~I~nc~~~~~~-gi~igs~g~~ 104 (247)
...|+|+.|+...-.++.-||+...|++..|.||.|... .++|.+..+ ....|+|++|.++. |+.+|..
T Consensus 156 ~r~irNlviD~t~~~~~~~gIhw~vaQatsL~Nv~i~m~~~sg~~~~GI~~e~G-Sgg~i~Dl~f~GG~~G~~~gnQ--- 231 (758)
T 3eqn_A 156 FRSVRNFVIDLRQVSGSATGIHWQVSQATSLINIVFQMSTAAGNQHQGIFMENG-SGGFLGDLVFNGGNIGATFGNQ--- 231 (758)
T ss_dssp CEEEEEEEEECTTCSSCEEEEECCCCSSEEEEEEEEECCCSTTCCEEEEEECSC-CCCEEEEEEEESCSEEEEEECS---
T ss_pred eeeecceEEeccccCCCceEEEEEecCceEEEEEEEEecCCCCCcceeEEecCC-CceEEEeeEEeCCceEEEcCCc---
Confidence 467889888875432334588999999999999999863 578888763 48999999999875 9999752
Q ss_pred CCCCcEEEEEEEeeEEeCCceeEEEEEecCCCCceEEcEEEEeEEEeCCCccEEEEeeeCCCCCCCCCccCceEEEeEEE
Q 040962 105 ANERNVHGLAVRNCTFRGTTNGVRIKTWASPQANVASGFTFENIFMSNVENPIVIDQMYCPHGSCNQKITSNVQIKDVTY 184 (247)
Q Consensus 105 ~~~~~i~nI~v~ni~~~~~~~gi~ik~~~~~~~g~i~nI~f~ni~~~~~~~~i~i~~~y~~~~~~~~~~~~~~~i~nI~~ 184 (247)
.-.++|++|+|| ..||.+.-.+ ..+|++++++++..+|.+...+..... ....+...|.|-+|
T Consensus 232 --QfT~rnltF~~~-----~taI~~~w~w--------gwt~~~~~i~nc~vGi~~~~g~~~~~~--~q~vGsv~l~Ds~~ 294 (758)
T 3eqn_A 232 --QFTVRNLTFNNA-----NTAINAIWNW--------GWTFQRITINNCQVGFDLTQGGTSNTG--AQGVGAEAIIDAVV 294 (758)
T ss_dssp --CCEEEEEEEESC-----SEEEEEEEBS--------CEEEEEEEEESCSEEEEECCCCSSTTS--CCCBCEEEEEEEEE
T ss_pred --ceEEeccEEeCh-----HHHHhhhcCc--------eEEEEEeEEECCCccEEEcCCCCCccc--CcceeeEEEEEeeE
Confidence 234556665555 4477665333 378899999988877777653221000 01123456666666
Q ss_pred EeEE
Q 040962 185 RNIW 188 (247)
Q Consensus 185 ~ni~ 188 (247)
+|+.
T Consensus 295 ~n~~ 298 (758)
T 3eqn_A 295 TNTQ 298 (758)
T ss_dssp ESCS
T ss_pred Eccc
Confidence 6654
No 47
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=98.03 E-value=2.2e-05 Score=70.43 Aligned_cols=133 Identities=10% Similarity=0.110 Sum_probs=85.4
Q ss_pred EEEEEccEEEEeeEEeCC--CCc--------EEEEeceecEEEEeEEEE---cCCCCCCCCeeeecCcccEEEE-eeEEc
Q 040962 3 VFNFVTNSRISGITSVNS--KNA--------HISLYGCHKVSIDNIKIT---APYQSPNTDGIKIGDSKGIKIT-HSSIG 68 (247)
Q Consensus 3 ~~~~~~nv~i~giti~n~--~~~--------~i~~~~~~nv~i~n~~I~---~~~~~~n~DGidi~~s~nV~I~-n~~i~ 68 (247)
.+.+.+|+.|.|=-..|. ..| ......+++|.+++++.. .+.| -+++..|++++++ +..+.
T Consensus 141 ~~~~VeNIaITG~GTIDG~g~n~t~e~~~~Rq~~~~~fdnV~Vn~Vt~~v~~Sg~W-----TIhPi~Cqnvt~r~gL~f~ 215 (514)
T 2vbk_A 141 IGRYLRNIRVTGNNTCNGIDTNITAEDSVIRQVYGWVFDNVMVNEVETAYLMQGLW-----HSKFIACQAGTCRVGLHFL 215 (514)
T ss_dssp SCEEEESCEEECCSSSEEEEESCCTTCSSCCCEESEEEESCEEEEEEEEEEEESEE-----EEEEESCEEEEEEEEEEEE
T ss_pred cccCceEEEEECCCeEeCCCCCccccceeeeccceEEeeeEEEEeEEEeEeccCcE-----EEeEeccCceecccCcccc
Confidence 456677888876221111 011 234445889999999653 2322 4888899999987 55442
Q ss_pred cCCceEEecCCcEeEEEEeeEEcCCC-eEEEEec----cccCCCCcEEEEEEEeeEEeCCceeEEEEEe-cCCCCceEEc
Q 040962 69 TGDDCIALLSGSTNINVTDVTCGPGH-GISVGSL----GRYANERNVHGLAVRNCTFRGTTNGVRIKTW-ASPQANVASG 142 (247)
Q Consensus 69 ~~DD~i~i~s~~~nV~I~nc~~~~~~-gi~igs~----g~~~~~~~i~nI~v~ni~~~~~~~gi~ik~~-~~~~~g~i~n 142 (247)
.+ |+||+|.||.|..++ .|+++|. ++. ..-..+||. +.++-|+|+ . .|.++|
T Consensus 216 --------eS-CrNV~IsnC~FsVGDdciaiksGk~~~~~~-~~~~se~~~---------hgav~igSE~m---~~Gvk~ 273 (514)
T 2vbk_A 216 --------GQ-CVSVSVSSCHFSRGNYSADESFGIRIQPQT-YAWSSEAVR---------SEAIILDSETM---CIGFKN 273 (514)
T ss_dssp --------SC-CEEEEEESCEEECTTSCCTTCEEEEEECBC-CTTTSSCBC---------CEEEEEESSEE---EESCSE
T ss_pred --------CC-CCeEEEeccEEecCcceeeeecCceecccc-cCCcchhcc---------cccEEECchhh---cccccc
Confidence 24 899999999999763 4555441 111 123355555 568888877 4 477899
Q ss_pred -EEEEeEEEeCCCccEEEEeeeCC
Q 040962 143 -FTFENIFMSNVENPIVIDQMYCP 165 (247)
Q Consensus 143 -I~f~ni~~~~~~~~i~i~~~y~~ 165 (247)
|++++|-+.+.+. ++..|+.
T Consensus 274 ~v~v~~Clf~~td~---~~~~~~~ 294 (514)
T 2vbk_A 274 AVYVHDCLDLHMEQ---LDLDYCG 294 (514)
T ss_dssp EEEESCCEEEEEES---EEEEEES
T ss_pred cEEEEeeeccCCcc---ccccccC
Confidence 9999999887654 3556764
No 48
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=98.03 E-value=2.1e-05 Score=70.79 Aligned_cols=58 Identities=10% Similarity=0.098 Sum_probs=34.9
Q ss_pred EEccEEEEeeEEeCCCCcEEEEeceecEEEEeEEEEcCCCCCCCCeeeecCc-ccEEEEeeEEc
Q 040962 6 FVTNSRISGITSVNSKNAHISLYGCHKVSIDNIKITAPYQSPNTDGIKIGDS-KGIKITHSSIG 68 (247)
Q Consensus 6 ~~~nv~i~giti~n~~~~~i~~~~~~nv~i~n~~I~~~~~~~n~DGidi~~s-~nV~I~n~~i~ 68 (247)
....++|+||+|.|+...++.+.. .+.+|++++|....+ .||.+... .+.+|.+|.+.
T Consensus 113 ~~~~~~i~gl~I~n~g~~GI~v~g-s~~~i~n~~i~~n~~----~GI~l~~~~s~n~I~nn~i~ 171 (400)
T 1ru4_A 113 TGDYWYFKGVEVTRAGYQGAYVIG-SHNTFENTAFHHNRN----TGLEINNGGSYNTVINSDAY 171 (400)
T ss_dssp CSSCEEEESEEEESCSSCSEEECS-SSCEEESCEEESCSS----CSEEECTTCCSCEEESCEEE
T ss_pred ECCeEEEEeEEEEeCCCCcEEEeC-CCcEEEeEEEECCCc----eeEEEEcccCCeEEEceEEE
Confidence 456778888888777666666665 566677777765321 15555432 25555555553
No 49
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=98.03 E-value=2.9e-05 Score=68.78 Aligned_cols=106 Identities=18% Similarity=0.230 Sum_probs=76.5
Q ss_pred EccEEEEee----EEeCCCCcEEEEe-ceecEEEEeEEEEcC--CCCCCCCeeeecCcccEEEEeeEEcc-CCceEEe-c
Q 040962 7 VTNSRISGI----TSVNSKNAHISLY-GCHKVSIDNIKITAP--YQSPNTDGIKIGDSKGIKITHSSIGT-GDDCIAL-L 77 (247)
Q Consensus 7 ~~nv~i~gi----ti~n~~~~~i~~~-~~~nv~i~n~~I~~~--~~~~n~DGidi~~s~nV~I~n~~i~~-~DD~i~i-~ 77 (247)
-.|.+|.|. .|. ..+|.+. .++||.|+||+|... ...+..|+|.+..++||.|++|.+.. +|..+.. +
T Consensus 107 ~snkTI~G~G~~~~i~---G~gl~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~~d~~~~~g~ 183 (359)
T 1idk_A 107 TSNKSLIGEGSSGAIK---GKGLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARIGRQHYVLGT 183 (359)
T ss_dssp CSSEEEEECTTTCEEE---SCCEEECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEESSCSEEECC
T ss_pred CCCceEEEecCCeEEe---cceEEEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecCCCCcEEecc
Confidence 356666654 333 3468887 899999999999983 22246799999999999999999985 5666665 4
Q ss_pred CCcEeEEEEeeEEcCC----------C--eEEEEeccccCCCCcEEEEEEEeeEEeCC
Q 040962 78 SGSTNINVTDVTCGPG----------H--GISVGSLGRYANERNVHGLAVRNCTFRGT 123 (247)
Q Consensus 78 s~~~nV~I~nc~~~~~----------~--gi~igs~g~~~~~~~i~nI~v~ni~~~~~ 123 (247)
.++++|+|++|.|... | +..+.. .-.+|+|.+..+.+.
T Consensus 184 ~~s~~VTISnn~f~~~~~~s~~~~G~h~~~~~L~G--------~sd~vT~hhN~f~~~ 233 (359)
T 1idk_A 184 SADNRVSLTNNYIDGVSDYSATCDGYHYWAIYLDG--------DADLVTMKGNYIYHT 233 (359)
T ss_dssp CTTCEEEEESCEEECBCSCBTTSSSBBSCCEEECC--------SSCEEEEESCEEESB
T ss_pred cCcceEEEECcEecCCcccccccCccccceEEEEe--------cCCCeEEEceEeecC
Confidence 5689999999999732 1 333321 124788888888764
No 50
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=97.80 E-value=0.00013 Score=64.55 Aligned_cols=105 Identities=19% Similarity=0.219 Sum_probs=74.0
Q ss_pred ccEEEEee----EEeCCCCcEEEEe-ceecEEEEeEEEEcCCC--CCCCCeeeecCcccEEEEeeEEccC-CceEE-ecC
Q 040962 8 TNSRISGI----TSVNSKNAHISLY-GCHKVSIDNIKITAPYQ--SPNTDGIKIGDSKGIKITHSSIGTG-DDCIA-LLS 78 (247)
Q Consensus 8 ~nv~i~gi----ti~n~~~~~i~~~-~~~nv~i~n~~I~~~~~--~~n~DGidi~~s~nV~I~n~~i~~~-DD~i~-i~s 78 (247)
++.+|.|+ +|.. ..|.+. .++||.|+||+|..... .+..|||.+..++||.|++|.+... |..+. .+.
T Consensus 108 snkTI~G~g~~~~I~G---~gl~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~~~d~~~~~~~~ 184 (359)
T 1qcx_A 108 SNKSIVGQGTKGVIKG---KGLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARIGRQHIVLGTS 184 (359)
T ss_dssp SSEEEEECTTCCEEES---CCEEEETTCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEEESSCSEEECSS
T ss_pred CCceEEecCCceEEec---ceEEEecCCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeeccCcCceeeccc
Confidence 44555553 4442 457887 89999999999998431 2457999999999999999999864 54553 344
Q ss_pred CcEeEEEEeeEEcCC----------C--eEEEEeccccCCCCcEEEEEEEeeEEeCC
Q 040962 79 GSTNINVTDVTCGPG----------H--GISVGSLGRYANERNVHGLAVRNCTFRGT 123 (247)
Q Consensus 79 ~~~nV~I~nc~~~~~----------~--gi~igs~g~~~~~~~i~nI~v~ni~~~~~ 123 (247)
++++|+|++|.|... | +..+. +.-.+++|.+..+.+.
T Consensus 185 ~s~~vTISnn~f~~~~~~s~~~~G~H~~~~~l~--------G~sd~vT~~~N~f~~~ 233 (359)
T 1qcx_A 185 ADNRVTISYSLIDGRSDYSATCNGHHYWGVYLD--------GSNDMVTLKGNYFYNL 233 (359)
T ss_dssp CCEEEEEESCEEECBCSSBTTSSSBBSCCEEEC--------CSSEEEEEESCEEESB
T ss_pred ccccEEEECcEecCCccccccCcccccceeEEe--------cCCCCeehcccEeccC
Confidence 689999999999742 2 33331 1124788888887754
No 51
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=97.61 E-value=0.0024 Score=55.91 Aligned_cols=106 Identities=17% Similarity=0.074 Sum_probs=79.8
Q ss_pred eEEEEEccEEEEeeEEeCC-----------CCcEEEEeceecEEEEeEEEEcCCCCCCCCe-eeec-CcccEEEEeeEEc
Q 040962 2 MVFNFVTNSRISGITSVNS-----------KNAHISLYGCHKVSIDNIKITAPYQSPNTDG-IKIG-DSKGIKITHSSIG 68 (247)
Q Consensus 2 i~~~~~~nv~i~giti~n~-----------~~~~i~~~~~~nv~i~n~~I~~~~~~~n~DG-idi~-~s~nV~I~n~~i~ 68 (247)
|.+.+++||.|++|+|++. ...+|.+..++||.|+++++.... || +|+. .+++|+|.+|.|.
T Consensus 85 i~I~~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~-----Dg~idi~~~s~~vTISnn~f~ 159 (340)
T 3zsc_A 85 LVIKDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVENSHHIWIDHITFVNGN-----DGAVDIKKYSNYITVSWNKFV 159 (340)
T ss_dssp EEEESCEEEEEESCEEECCCCTTCTTSCSSCCCSEEEESCEEEEEESCEEESCS-----SCSEEEETTCEEEEEESCEEE
T ss_pred eEEEcCceEEEeCeEEECCccccCccCCcCCCCeEEEecCCcEEEEeeeeccCC-----ccceEEecCCceEEEECcEec
Confidence 6778899999999999985 245799999999999999999864 45 6765 6899999999999
Q ss_pred cCCceEEecCCc----------EeEEEEeeEEcCC--CeEEEEeccccCCCCcEEEEEEEeeEEeC
Q 040962 69 TGDDCIALLSGS----------TNINVTDVTCGPG--HGISVGSLGRYANERNVHGLAVRNCTFRG 122 (247)
Q Consensus 69 ~~DD~i~i~s~~----------~nV~I~nc~~~~~--~gi~igs~g~~~~~~~i~nI~v~ni~~~~ 122 (247)
.-+-+.-+++.. .+|++.++.+... +.=++.. + .+++-|..+++
T Consensus 160 ~h~k~~LiG~sd~~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~r~-------G---~~Hv~NN~~~n 215 (340)
T 3zsc_A 160 DHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYFKNLIQRMPRIRF-------G---MAHVFNNFYSM 215 (340)
T ss_dssp SCSBCCEECCCTTSCHHHHHHSCEEEEESCEEESCCBCTTEEES-------S---EEEEESCEEEC
T ss_pred cCceeeEeCcCCCCccccccCCcEEEEECeEecCCCCCCCcccC-------C---eEEEEccEEEC
Confidence 765555455421 3899999998753 2222210 1 46888888887
No 52
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=97.59 E-value=0.00061 Score=59.99 Aligned_cols=129 Identities=12% Similarity=0.101 Sum_probs=91.0
Q ss_pred eEEEEEccEEEEeeEEeCC----------------------CCcEEEEeceecEEEEeEEEEcCCCCCCCCee-ee-cCc
Q 040962 2 MVFNFVTNSRISGITSVNS----------------------KNAHISLYGCHKVSIDNIKITAPYQSPNTDGI-KI-GDS 57 (247)
Q Consensus 2 i~~~~~~nv~i~giti~n~----------------------~~~~i~~~~~~nv~i~n~~I~~~~~~~n~DGi-di-~~s 57 (247)
|.+.+++||.|++|+|.+. ...+|.+..+++|.|+++++... .||+ ++ ..+
T Consensus 108 i~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~~s~nVwIDHcs~s~~-----~Dg~id~~~~s 182 (346)
T 1pxz_A 108 LFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMRNVTNAWIDHNSLSDC-----SDGLIDVTLGS 182 (346)
T ss_dssp EEEESCEEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEESCEEEEEESCEEECC-----SSEEEEEESSC
T ss_pred EEEEccCCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEecCceEEEEeeEEecC-----CCCcEeeccCc
Confidence 6778899999999999874 13479999999999999999875 4576 77 689
Q ss_pred ccEEEEeeEEccCCceEEecCC-------cEeEEEEeeEE-cCC--CeEEEEeccccCCCCcEEEEEEEeeEEeCCc-ee
Q 040962 58 KGIKITHSSIGTGDDCIALLSG-------STNINVTDVTC-GPG--HGISVGSLGRYANERNVHGLAVRNCTFRGTT-NG 126 (247)
Q Consensus 58 ~nV~I~n~~i~~~DD~i~i~s~-------~~nV~I~nc~~-~~~--~gi~igs~g~~~~~~~i~nI~v~ni~~~~~~-~g 126 (247)
++|+|++|.|..-+.+.-+++. ..+|++.++.+ ... +.-++. ...++|.|..+++.. ++
T Consensus 183 ~~vTISnn~f~~H~k~~l~G~sd~~~~d~~~~vT~~~N~f~~~~~~R~Pr~r----------~g~~hv~NN~~~~~~~~~ 252 (346)
T 1pxz_A 183 TGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRAR----------YGLVHVANNNYDPWNIYA 252 (346)
T ss_dssp EEEEEESCEEESEEEEEEESCCSSCGGGGGCEEEEESCEECSSEEECTTEEE----------SSEEEEESCEECCCSSCS
T ss_pred ceEEEEeeEEecCCceeEECCCCccccCCceEEEEEeeEEeCCccccCccEe----------cceEEEEeeEEEcccceE
Confidence 9999999999976666666552 13899999998 432 222222 136788888887643 44
Q ss_pred EEEEEecCCCCceEEcEEEEeEEEeCC
Q 040962 127 VRIKTWASPQANVASGFTFENIFMSNV 153 (247)
Q Consensus 127 i~ik~~~~~~~g~i~nI~f~ni~~~~~ 153 (247)
+... .+ ..+.+|+-.++..
T Consensus 253 i~~~--~~------~~i~~egN~F~~~ 271 (346)
T 1pxz_A 253 IGGS--SN------PTILSEGNSFTAP 271 (346)
T ss_dssp EEEE--SC------CEEEEESCEEECC
T ss_pred Eecc--CC------ceEEEECCEEECC
Confidence 4332 11 2455666555554
No 53
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=97.59 E-value=0.0026 Score=56.10 Aligned_cols=91 Identities=15% Similarity=0.154 Sum_probs=68.6
Q ss_pred eEEEEEccEEEEeeEEeCCC---------------CcEEEEeceecEEEEeEEEEcCCC---------CC---CCCe-ee
Q 040962 2 MVFNFVTNSRISGITSVNSK---------------NAHISLYGCHKVSIDNIKITAPYQ---------SP---NTDG-IK 53 (247)
Q Consensus 2 i~~~~~~nv~i~giti~n~~---------------~~~i~~~~~~nv~i~n~~I~~~~~---------~~---n~DG-id 53 (247)
|++.+++||.|++|+|++.. ..+|.+..++||.|+++++....+ +. -.|| +|
T Consensus 98 l~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~D 177 (355)
T 1pcl_A 98 LVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGALD 177 (355)
T ss_pred EEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEecCCCcEEEEeeEEeccccCccccccccCcccccccccee
Confidence 67788999999999998642 247999999999999999987421 01 1455 45
Q ss_pred ec-CcccEEEEeeEEccCCceEEecCC---------cEeEEEEeeEEcC
Q 040962 54 IG-DSKGIKITHSSIGTGDDCIALLSG---------STNINVTDVTCGP 92 (247)
Q Consensus 54 i~-~s~nV~I~n~~i~~~DD~i~i~s~---------~~nV~I~nc~~~~ 92 (247)
+. .+++|+|.+|+|..-+-+.-+++. ..+|++.++.|..
T Consensus 178 i~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~ 226 (355)
T 1pcl_A 178 IKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDR 226 (355)
T ss_pred eecCCCcEEEEeeEEcCCCceEEeCCCCCCcccccCcceEEEECcEEeC
Confidence 54 789999999999976655555542 1269999999865
No 54
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=97.53 E-value=0.00066 Score=60.95 Aligned_cols=61 Identities=7% Similarity=0.058 Sum_probs=33.3
Q ss_pred EEEeceecEEEEeEEEEcCCCCCCCCeeeecCcccEEEEeeEEccC-CceEEecCCcEeEEEEeeEEc
Q 040962 25 ISLYGCHKVSIDNIKITAPYQSPNTDGIKIGDSKGIKITHSSIGTG-DDCIALLSGSTNINVTDVTCG 91 (247)
Q Consensus 25 i~~~~~~nv~i~n~~I~~~~~~~n~DGidi~~s~nV~I~n~~i~~~-DD~i~i~s~~~nV~I~nc~~~ 91 (247)
+.+ ...+++|++++|.+... .||.+.+ .+.+|++|.+... +.+|.+..+..+.+|+||.+.
T Consensus 110 i~i-~~~~~~i~gl~I~n~g~----~GI~v~g-s~~~i~n~~i~~n~~~GI~l~~~~s~n~I~nn~i~ 171 (400)
T 1ru4_A 110 FYV-TGDYWYFKGVEVTRAGY----QGAYVIG-SHNTFENTAFHHNRNTGLEINNGGSYNTVINSDAY 171 (400)
T ss_dssp EEE-CSSCEEEESEEEESCSS----CSEEECS-SSCEEESCEEESCSSCSEEECTTCCSCEEESCEEE
T ss_pred EEE-ECCeEEEEeEEEEeCCC----CcEEEeC-CCcEEEeEEEECCCceeEEEEcccCCeEEEceEEE
Confidence 444 44566666666665421 2666655 4556666666543 335666554445566666653
No 55
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=97.34 E-value=0.0019 Score=57.65 Aligned_cols=110 Identities=14% Similarity=0.222 Sum_probs=85.3
Q ss_pred ccEEEEeeEEeCC-----CC------cEEEEec-eecEEEEeEEEEcCCCCCCCCeeeecCcccEEEEeeEEccCCceEE
Q 040962 8 TNSRISGITSVNS-----KN------AHISLYG-CHKVSIDNIKITAPYQSPNTDGIKIGDSKGIKITHSSIGTGDDCIA 75 (247)
Q Consensus 8 ~nv~i~giti~n~-----~~------~~i~~~~-~~nv~i~n~~I~~~~~~~n~DGidi~~s~nV~I~n~~i~~~DD~i~ 75 (247)
.+|+|++++|.+. .. =++.+.. .++++|+++.|..... ||.+..+++.+|++.+|.....||.
T Consensus 136 s~V~~~~v~I~G~~~~~~G~s~~~~dAGI~v~~~~d~~~I~nn~i~~~~f-----GI~l~~a~~~~I~~N~I~e~GNgI~ 210 (410)
T 2inu_A 136 SGIVFRDFCLDGVGFTPGKNSYHNGKTGIEVASDNDSFHITGMGFVYLEH-----ALIVRGADALRVNDNMIAECGNCVE 210 (410)
T ss_dssp ECCEEESCEEECCCCSSSTTSCCCSCEEEEECSCEESCEEESCEEESCSE-----EEEETTEESCEEESCEEESSSEEEE
T ss_pred CCcEECCEEEECCEeecCCCCcccCceeEEEeccCCeEEEECCEEecccE-----EEEEccCCCcEEECCEEEecCCcee
Confidence 5666666666665 32 2677875 8899999999999765 9999999999999999997778999
Q ss_pred ecCCcEeEEEEeeEEcCC-Ce--EEEEeccccCCCCcEEEEEEEeeEE-eCCceeEEEEE
Q 040962 76 LLSGSTNINVTDVTCGPG-HG--ISVGSLGRYANERNVHGLAVRNCTF-RGTTNGVRIKT 131 (247)
Q Consensus 76 i~s~~~nV~I~nc~~~~~-~g--i~igs~g~~~~~~~i~nI~v~ni~~-~~~~~gi~ik~ 131 (247)
+...++...|++..+... +| |.+. ...+.+|++..+ .....|+.+..
T Consensus 211 L~G~~~~~~I~~N~i~~~~dG~gIyl~---------ns~~~~I~~N~i~~~~R~gIh~m~ 261 (410)
T 2inu_A 211 LTGAGQATIVSGNHMGAGPDGVTLLAE---------NHEGLLVTGNNLFPRGRSLIEFTG 261 (410)
T ss_dssp ECSCEESCEEESCEEECCTTSEEEEEE---------SEESCEEESCEECSCSSEEEEEES
T ss_pred eccccccceEecceeeecCCCCEEEEE---------eCCCCEEECCCcccCcceEEEEEc
Confidence 988788999999998864 35 6664 356777777755 55777888753
No 56
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=97.30 E-value=0.0016 Score=57.49 Aligned_cols=133 Identities=14% Similarity=0.007 Sum_probs=86.2
Q ss_pred eEEE-EEccEEEEeeEEeCCC------CcEEEEeceecEEEEeEEEEcCCCCCCCCee-e--ecCcccEEEEeeEEccCC
Q 040962 2 MVFN-FVTNSRISGITSVNSK------NAHISLYGCHKVSIDNIKITAPYQSPNTDGI-K--IGDSKGIKITHSSIGTGD 71 (247)
Q Consensus 2 i~~~-~~~nv~i~giti~n~~------~~~i~~~~~~nv~i~n~~I~~~~~~~n~DGi-d--i~~s~nV~I~n~~i~~~D 71 (247)
|.+. +++||.|++|+|++.. ..+|.+..+++|.|+++++....| +. + ...+++|+|.++.|....
T Consensus 126 l~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~~~d-----~~~~~~~~~s~~vTISnn~f~~~~ 200 (359)
T 1qcx_A 126 LRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARIGR-----QHIVLGTSADNRVTISYSLIDGRS 200 (359)
T ss_dssp EEEETTCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEEESS-----CSEEECSSCCEEEEEESCEEECBC
T ss_pred EEEecCCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeeccCc-----CceeecccccccEEEECcEecCCc
Confidence 5666 7899999999999753 257999999999999999987533 32 1 347899999999997431
Q ss_pred -----------ceEEecCCcEeEEEEeeEEcCC--CeEEEEeccccCCCCcEEEEEEEeeEEeCCc-eeEEEEEecCCCC
Q 040962 72 -----------DCIALLSGSTNINVTDVTCGPG--HGISVGSLGRYANERNVHGLAVRNCTFRGTT-NGVRIKTWASPQA 137 (247)
Q Consensus 72 -----------D~i~i~s~~~nV~I~nc~~~~~--~gi~igs~g~~~~~~~i~nI~v~ni~~~~~~-~gi~ik~~~~~~~ 137 (247)
...-+-..+.+|++.+..+... +.=++. .-..+++.|..+++.. +++.. ..+
T Consensus 201 ~~s~~~~G~H~~~~~l~G~sd~vT~~~N~f~~~~~R~Pr~r---------~~~~~hv~NN~~~n~~~~a~~~--~~~--- 266 (359)
T 1qcx_A 201 DYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSGRMPKVQ---------GNTLLHAVNNLFHNFDGHAFEI--GTG--- 266 (359)
T ss_dssp SSBTTSSSBBSCCEEECCSSEEEEEESCEEESBCSCTTEEC---------SSEEEEEESCEEEEEEEEEEEE--CTT---
T ss_pred cccccCcccccceeEEecCCCCeehcccEeccCcccCceec---------CCceEEEEccEEECccCeEEec--CCC---
Confidence 1333433367999999988642 111111 1135778888777642 33332 221
Q ss_pred ceEEcEEEEeEEEeCCCcc
Q 040962 138 NVASGFTFENIFMSNVENP 156 (247)
Q Consensus 138 g~i~nI~f~ni~~~~~~~~ 156 (247)
..|.+|+-.+++...|
T Consensus 267 ---~~i~~e~N~F~~~~~~ 282 (359)
T 1qcx_A 267 ---GYVLAEGNVFQDVNVV 282 (359)
T ss_dssp ---EEEEEESCEEEEEEEE
T ss_pred ---ceEEEEeeEEECCCcc
Confidence 3455666555554444
No 57
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=97.28 E-value=0.0011 Score=58.69 Aligned_cols=135 Identities=16% Similarity=0.105 Sum_probs=86.2
Q ss_pred eEEE-EEccEEEEeeEEeCC--C----CcEEEEeceecEEEEeEEEEcCCCCCCCCeee--ecCcccEEEEeeEEccCCc
Q 040962 2 MVFN-FVTNSRISGITSVNS--K----NAHISLYGCHKVSIDNIKITAPYQSPNTDGIK--IGDSKGIKITHSSIGTGDD 72 (247)
Q Consensus 2 i~~~-~~~nv~i~giti~n~--~----~~~i~~~~~~nv~i~n~~I~~~~~~~n~DGid--i~~s~nV~I~n~~i~~~DD 72 (247)
|.+. +++||.|++|+|++. . ..+|.+..+++|.|+++++....+. -++ ...+++|+|.+|.|...++
T Consensus 126 l~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~~d~----~~~~g~~~s~~VTISnn~f~~~~~ 201 (359)
T 1idk_A 126 LRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARIGRQ----HYVLGTSADNRVSLTNNYIDGVSD 201 (359)
T ss_dssp EEECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEESSC----SEEECCCTTCEEEEESCEEECBCS
T ss_pred EEEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecCCCC----cEEecccCcceEEEECcEecCCcc
Confidence 5566 789999999999973 2 2579999999999999999874331 122 4578999999999974321
Q ss_pred -----------eEEecCCcEeEEEEeeEEcCC--CeEEEEeccccCCCCcEEEEEEEeeEEeCC-ceeEEEEEecCCCCc
Q 040962 73 -----------CIALLSGSTNINVTDVTCGPG--HGISVGSLGRYANERNVHGLAVRNCTFRGT-TNGVRIKTWASPQAN 138 (247)
Q Consensus 73 -----------~i~i~s~~~nV~I~nc~~~~~--~gi~igs~g~~~~~~~i~nI~v~ni~~~~~-~~gi~ik~~~~~~~g 138 (247)
...+...+.+|++.+.++... +.=++. .-..+++.|..+++. .+++.+ ..+
T Consensus 202 ~s~~~~G~h~~~~~L~G~sd~vT~hhN~f~~~~~R~Pr~r---------~g~~~hv~NN~~~n~~~~~i~~--~~~---- 266 (359)
T 1idk_A 202 YSATCDGYHYWAIYLDGDADLVTMKGNYIYHTSGRSPKVQ---------DNTLLHAVNNYWYDISGHAFEI--GEG---- 266 (359)
T ss_dssp CBTTSSSBBSCCEEECCSSCEEEEESCEEESBCSCTTEEC---------TTCEEEEESCEEEEEEEEEEEE--CTT----
T ss_pred cccccCccccceEEEEecCCCeEEEceEeecCcccCcccc---------CCceEEEECCEEecccceEEec--cCC----
Confidence 233433367999999998743 111111 113577777777763 234443 221
Q ss_pred eEEcEEEEeEEEeCCCccE
Q 040962 139 VASGFTFENIFMSNVENPI 157 (247)
Q Consensus 139 ~i~nI~f~ni~~~~~~~~i 157 (247)
..|.+|+-.+++...|+
T Consensus 267 --~~i~~e~N~F~~~~~p~ 283 (359)
T 1idk_A 267 --GYVLAEGNVFQNVDTVL 283 (359)
T ss_dssp --CEEEEESCEEEEEEEEE
T ss_pred --cEEEEEccEEECCCCce
Confidence 23455555555444444
No 58
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=97.26 E-value=0.00094 Score=58.91 Aligned_cols=93 Identities=17% Similarity=0.185 Sum_probs=65.6
Q ss_pred CCeeeecCcccEEEEeeEEcc------CCceEEecCCcEeEEEEeeEEcCC--------------Ce-EEEEeccccCCC
Q 040962 49 TDGIKIGDSKGIKITHSSIGT------GDDCIALLSGSTNINVTDVTCGPG--------------HG-ISVGSLGRYANE 107 (247)
Q Consensus 49 ~DGidi~~s~nV~I~n~~i~~------~DD~i~i~s~~~nV~I~nc~~~~~--------------~g-i~igs~g~~~~~ 107 (247)
.-||.+..++||.|+|.+|+. ..|+|.+.. ++||.|+.|.+..+ +| +.++
T Consensus 102 g~gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~-s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~-------- 172 (353)
T 1air_A 102 NFGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDD-SPNVWVDHNELFAANHECDGTPDNDTTFESAVDIK-------- 172 (353)
T ss_dssp SSEEEEESCCSEEEESCEEESCSCGGGTCCSEEEES-CCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEE--------
T ss_pred CceEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeC-CCcEEEEeeEEecCCcccccccccccccccceeee--------
Confidence 348888889999999999984 358999985 89999999999643 33 3443
Q ss_pred CcEEEEEEEeeEEeCCceeEEEEEecCCCCceEEcEEEEeEEEeCC
Q 040962 108 RNVHGLAVRNCTFRGTTNGVRIKTWASPQANVASGFTFENIFMSNV 153 (247)
Q Consensus 108 ~~i~nI~v~ni~~~~~~~gi~ik~~~~~~~g~i~nI~f~ni~~~~~ 153 (247)
....+|+++|+.|.+...+.-+++... ..+ .+|+|-+-.+.+.
T Consensus 173 ~~s~~VTISnn~f~~h~k~~LiG~sd~-~~g--~~vT~hhN~f~~~ 215 (353)
T 1air_A 173 GASNTVTVSYNYIHGVKKVGLDGSSSS-DTG--RNITYHHNYYNDV 215 (353)
T ss_dssp SSCCEEEEESCEEEEEEECCEESSSTT-CCC--CEEEEESCEEEEE
T ss_pred cccCcEEEEeeEEcCCCceeEECCCcC-CCC--ceEEEEceEEcCC
Confidence 235799999999987655544443322 123 5677766666543
No 59
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=96.80 E-value=0.0043 Score=54.21 Aligned_cols=118 Identities=14% Similarity=0.040 Sum_probs=79.9
Q ss_pred eEEE-EEccEEEEeeEEeCCC----CcEEEEe-----ceecEEEEeEEEEcCCCC------CCCCe-eeec-CcccEEEE
Q 040962 2 MVFN-FVTNSRISGITSVNSK----NAHISLY-----GCHKVSIDNIKITAPYQS------PNTDG-IKIG-DSKGIKIT 63 (247)
Q Consensus 2 i~~~-~~~nv~i~giti~n~~----~~~i~~~-----~~~nv~i~n~~I~~~~~~------~n~DG-idi~-~s~nV~I~ 63 (247)
|.+. +++||.|++|+|.+.+ ..+|.+. .++||.|+++++....+. .--|| +|+. ++++|+|.
T Consensus 88 l~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTIS 167 (330)
T 2qy1_A 88 IRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTVS 167 (330)
T ss_dssp EEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEEE
T ss_pred EEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEEEE
Confidence 5677 8999999999999875 4689999 599999999999754310 01144 4654 68999999
Q ss_pred eeEEccCCceEEecCC-------cEeEEEEeeEEcCC--CeEEEEeccccCCCCcEEEEEEEeeEEeCC-ceeEEE
Q 040962 64 HSSIGTGDDCIALLSG-------STNINVTDVTCGPG--HGISVGSLGRYANERNVHGLAVRNCTFRGT-TNGVRI 129 (247)
Q Consensus 64 n~~i~~~DD~i~i~s~-------~~nV~I~nc~~~~~--~gi~igs~g~~~~~~~i~nI~v~ni~~~~~-~~gi~i 129 (247)
+|+|..-+-+.-+++. ..+|++.+..+... +.=++. .+ .+++.|..+++. .+++..
T Consensus 168 nn~f~~h~k~~L~G~sd~~~~~~~~~vT~h~N~f~~~~~R~Pr~r-------~G---~~hv~NN~~~n~~~~~i~~ 233 (330)
T 2qy1_A 168 YNYVYNYQKVALNGYSDSDTKNSAARTTYHHNRFENVESRVPLQR-------FG---LSHIYNNYFNNVTTSGINV 233 (330)
T ss_dssp SCEEEEEEECCEESSSTTCGGGGGCEEEEESCEEEEEEECTTEEE-------SS---EEEEESCEEEEECSCSEEE
T ss_pred cceeccCCeEEEECCCCccccCCCceEEEECcEEcCCCCCCCcee-------cc---eEEEEeeEEEcccceEecc
Confidence 9999865544444441 15899999998642 111221 11 367777777663 345443
No 60
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=96.71 E-value=0.0029 Score=55.95 Aligned_cols=74 Identities=18% Similarity=0.291 Sum_probs=57.1
Q ss_pred Ceeee---cCcccEEEEeeEEccC----------------CceEEecCCcEeEEEEeeEEcCC-----------------
Q 040962 50 DGIKI---GDSKGIKITHSSIGTG----------------DDCIALLSGSTNINVTDVTCGPG----------------- 93 (247)
Q Consensus 50 DGidi---~~s~nV~I~n~~i~~~----------------DD~i~i~s~~~nV~I~nc~~~~~----------------- 93 (247)
-||.+ ..++||.|+|++|+.. .|+|.+..+++||.|+.|.+..+
T Consensus 103 ~gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~ 182 (361)
T 1pe9_A 103 GSLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQ 182 (361)
T ss_dssp SEEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCC
T ss_pred CEEEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccccCcceee
Confidence 47888 6889999999999842 47899987689999999999853
Q ss_pred -Ce-EEEEeccccCCCCcEEEEEEEeeEEeCCceeEEEEE
Q 040962 94 -HG-ISVGSLGRYANERNVHGLAVRNCTFRGTTNGVRIKT 131 (247)
Q Consensus 94 -~g-i~igs~g~~~~~~~i~nI~v~ni~~~~~~~gi~ik~ 131 (247)
+| |.+. ....+|+|+|+.|.+...+.-+++
T Consensus 183 ~DgllDi~--------~~s~~VTiS~n~f~~h~k~~LiG~ 214 (361)
T 1pe9_A 183 HDGALDIK--------RGSDYVTISNSLIDQHDKTMLIGH 214 (361)
T ss_dssp CCCSEEEC--------TTCEEEEEESCEEEEEEECEEESC
T ss_pred ccceeeee--------cCCCcEEEEeeEEcCCCceeEecC
Confidence 33 3332 246899999999988665555543
No 61
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=96.61 E-value=0.011 Score=51.46 Aligned_cols=135 Identities=11% Similarity=0.135 Sum_probs=87.5
Q ss_pred CeEEEEEccEEEEeeEEeCCC---CcEEEEec-eecEEEEeEEEEcCC----CCCCCCe-eeec-CcccEEEEeeEEccC
Q 040962 1 SMVFNFVTNSRISGITSVNSK---NAHISLYG-CHKVSIDNIKITAPY----QSPNTDG-IKIG-DSKGIKITHSSIGTG 70 (247)
Q Consensus 1 ~i~~~~~~nv~i~giti~n~~---~~~i~~~~-~~nv~i~n~~I~~~~----~~~n~DG-idi~-~s~nV~I~n~~i~~~ 70 (247)
.|++.+++||.|++|+|.+.. ..+|.+.. ++||.|+++++.... +..-.|| +|+. ++++|+|.+|.|..-
T Consensus 96 gl~i~~a~NVIIrNl~i~~~~~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h 175 (326)
T 3vmv_A 96 GIRLSNAHNIIIQNVSIHHVREGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENH 175 (326)
T ss_dssp CEEEESEEEEEEESCEEECCCSTTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEEE
T ss_pred EEEEEecceEEEECeEEEcCCCCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEecC
Confidence 367889999999999999875 45799997 999999999998532 1112344 4664 689999999999865
Q ss_pred CceEEecCC------cEeEEEEeeEEcCC--CeEEEEeccccCCCCcEEEEEEEeeEEeCC-ceeEEEEEecCCCCceEE
Q 040962 71 DDCIALLSG------STNINVTDVTCGPG--HGISVGSLGRYANERNVHGLAVRNCTFRGT-TNGVRIKTWASPQANVAS 141 (247)
Q Consensus 71 DD~i~i~s~------~~nV~I~nc~~~~~--~gi~igs~g~~~~~~~i~nI~v~ni~~~~~-~~gi~ik~~~~~~~g~i~ 141 (247)
+-+.-+++. -.+|++.++++... +.=++. . -.+++.|..+++. .+++... .+ ..-.++
T Consensus 176 ~k~~LiG~sd~~~~~~~~vT~~~N~f~~~~~R~Pr~r-------~---G~~Hv~NN~~~n~~~~~~~~~--~~-a~v~~e 242 (326)
T 3vmv_A 176 WKTMLVGHTDNASLAPDKITYHHNYFNNLNSRVPLIR-------Y---ADVHMFNNYFKDINDTAINSR--VG-ARVFVE 242 (326)
T ss_dssp EECEEECSSSCGGGCCEEEEEESCEEEEEEECTTEEE-------S---CEEEEESCEEEEESSCSEEEE--TT-CEEEEE
T ss_pred ceEEEECCCCCCcccCccEEEEeeEecCCcCcCCccc-------C---CcEEEEccEEECCCceEEeec--CC-cEEEEE
Confidence 544444442 14799999988632 111221 0 1467777777664 3455442 22 123444
Q ss_pred cEEEEeE
Q 040962 142 GFTFENI 148 (247)
Q Consensus 142 nI~f~ni 148 (247)
+=.|++.
T Consensus 243 ~N~F~~~ 249 (326)
T 3vmv_A 243 NNYFDNV 249 (326)
T ss_dssp SCEEEEE
T ss_pred ceEEECC
Confidence 4455554
No 62
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=96.60 E-value=0.0034 Score=56.17 Aligned_cols=111 Identities=15% Similarity=0.131 Sum_probs=76.6
Q ss_pred eEEEEEccEEEEeeEEeCCC-------------------CcEEEEeceecEEEEeEEEEcCCCC------------CCCC
Q 040962 2 MVFNFVTNSRISGITSVNSK-------------------NAHISLYGCHKVSIDNIKITAPYQS------------PNTD 50 (247)
Q Consensus 2 i~~~~~~nv~i~giti~n~~-------------------~~~i~~~~~~nv~i~n~~I~~~~~~------------~n~D 50 (247)
|.+.. +||.|++|+|++.. ..+|.+..++||.|+++++....+. .-.|
T Consensus 145 l~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~D 223 (399)
T 2o04_A 145 FQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHHD 223 (399)
T ss_dssp EEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCCC
T ss_pred EEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeeccc
Confidence 55666 99999999998641 2468999999999999999975320 0135
Q ss_pred ee-eec-CcccEEEEeeEEccCCceEEecCC--------cEeEEEEeeEEcCC--CeEEEEeccccCCCCcEEEEEEEee
Q 040962 51 GI-KIG-DSKGIKITHSSIGTGDDCIALLSG--------STNINVTDVTCGPG--HGISVGSLGRYANERNVHGLAVRNC 118 (247)
Q Consensus 51 Gi-di~-~s~nV~I~n~~i~~~DD~i~i~s~--------~~nV~I~nc~~~~~--~gi~igs~g~~~~~~~i~nI~v~ni 118 (247)
|. |+. .+++|+|.+|.|..-+-+.-+++. -.+|++.++.+... +.=++. .+ .+++.|.
T Consensus 224 gl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f~~~~~R~Pr~R-------~G---~~Hv~NN 293 (399)
T 2o04_A 224 GQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNIVQAAPRVR-------FG---QVHVYNN 293 (399)
T ss_dssp CSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEESCEEEEEEECTTEES-------SC---EEEEESC
T ss_pred cceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEECcEecCCcccCCCcc-------cc---eEEEEcc
Confidence 53 554 789999999999975544444441 13799999998632 222221 11 3788888
Q ss_pred EEeCC
Q 040962 119 TFRGT 123 (247)
Q Consensus 119 ~~~~~ 123 (247)
.+++.
T Consensus 294 ~~~n~ 298 (399)
T 2o04_A 294 YYEGS 298 (399)
T ss_dssp EEECC
T ss_pred eEECC
Confidence 88754
No 63
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=96.55 E-value=0.0046 Score=55.62 Aligned_cols=111 Identities=17% Similarity=0.122 Sum_probs=77.2
Q ss_pred eEEEEEccEEEEeeEEeCCC-------------------CcEEEEeceecEEEEeEEEEcCCCC------------CCCC
Q 040962 2 MVFNFVTNSRISGITSVNSK-------------------NAHISLYGCHKVSIDNIKITAPYQS------------PNTD 50 (247)
Q Consensus 2 i~~~~~~nv~i~giti~n~~-------------------~~~i~~~~~~nv~i~n~~I~~~~~~------------~n~D 50 (247)
|++.+++||.|++|+|.+.. ..+|.+..++||.|+++++....+. .-.|
T Consensus 150 l~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~D 229 (416)
T 1vbl_A 150 FLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQHD 229 (416)
T ss_dssp EEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCCC
T ss_pred EEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceeecc
Confidence 56778999999999998641 2469999999999999999975310 0135
Q ss_pred e-eeec-CcccEEEEeeEEccCCceEEecCC--------cEeEEEEeeEEcCC--CeEEEEeccccCCCCcEEEEEEEee
Q 040962 51 G-IKIG-DSKGIKITHSSIGTGDDCIALLSG--------STNINVTDVTCGPG--HGISVGSLGRYANERNVHGLAVRNC 118 (247)
Q Consensus 51 G-idi~-~s~nV~I~n~~i~~~DD~i~i~s~--------~~nV~I~nc~~~~~--~gi~igs~g~~~~~~~i~nI~v~ni 118 (247)
| +|+. .+++|+|.+|+|..-+-+.-+++. --+|++.+++|... +.-++ ..+ .+++.|.
T Consensus 230 Gl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f~~~~~R~Pr~-------R~G---~~Hv~NN 299 (416)
T 1vbl_A 230 GALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYYKNVTQRLPRV-------RFG---QVHIYNN 299 (416)
T ss_dssp CSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEEEEEEECSSEE-------SSC---EEEEESC
T ss_pred cceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEecCCccCCccc-------ccc---eEEEEcc
Confidence 5 4554 789999999999976555444442 12699999998632 22222 111 3778888
Q ss_pred EEeC
Q 040962 119 TFRG 122 (247)
Q Consensus 119 ~~~~ 122 (247)
.+++
T Consensus 300 ~~~n 303 (416)
T 1vbl_A 300 YYEF 303 (416)
T ss_dssp EEEE
T ss_pred eEEC
Confidence 7764
No 64
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=96.53 E-value=0.011 Score=52.66 Aligned_cols=112 Identities=13% Similarity=0.173 Sum_probs=85.9
Q ss_pred eEEEE-EccEEEEeeEEeCCCCcEEEEeceecEEEEeEEEEcCCCCCCCCeeeecC-cccEEEEeeEEccCCce--EEec
Q 040962 2 MVFNF-VTNSRISGITSVNSKNAHISLYGCHKVSIDNIKITAPYQSPNTDGIKIGD-SKGIKITHSSIGTGDDC--IALL 77 (247)
Q Consensus 2 i~~~~-~~nv~i~giti~n~~~~~i~~~~~~nv~i~n~~I~~~~~~~n~DGidi~~-s~nV~I~n~~i~~~DD~--i~i~ 77 (247)
|.+.. .++++|++..|.+ ..+++.+..+++.+|++-.|.... .||++.+ ++...|++..+..++|+ |-+.
T Consensus 164 I~v~~~~d~~~I~nn~i~~-~~fGI~l~~a~~~~I~~N~I~e~G-----NgI~L~G~~~~~~I~~N~i~~~~dG~gIyl~ 237 (410)
T 2inu_A 164 IEVASDNDSFHITGMGFVY-LEHALIVRGADALRVNDNMIAECG-----NCVELTGAGQATIVSGNHMGAGPDGVTLLAE 237 (410)
T ss_dssp EEECSCEESCEEESCEEES-CSEEEEETTEESCEEESCEEESSS-----EEEEECSCEESCEEESCEEECCTTSEEEEEE
T ss_pred EEEeccCCeEEEECCEEec-ccEEEEEccCCCcEEECCEEEecC-----CceeeccccccceEecceeeecCCCCEEEEE
Confidence 44443 7788899999988 567999999999999999998532 3899988 99999999999999988 6666
Q ss_pred CCcEeEEEEeeEE-cCC-CeEEEEeccccCCCCcEEEEEEEeeEEeCCceeEEE
Q 040962 78 SGSTNINVTDVTC-GPG-HGISVGSLGRYANERNVHGLAVRNCTFRGTTNGVRI 129 (247)
Q Consensus 78 s~~~nV~I~nc~~-~~~-~gi~igs~g~~~~~~~i~nI~v~ni~~~~~~~gi~i 129 (247)
. +++.+|++-.+ ..+ +||-+-. ..+-.|++.++.+...|+.+
T Consensus 238 n-s~~~~I~~N~i~~~~R~gIh~m~---------s~~~~i~~N~f~~~~~Gi~~ 281 (410)
T 2inu_A 238 N-HEGLLVTGNNLFPRGRSLIEFTG---------CNRCSVTSNRLQGFYPGMLR 281 (410)
T ss_dssp S-EESCEEESCEECSCSSEEEEEES---------CBSCEEESCEEEESSSCSEE
T ss_pred e-CCCCEEECCCcccCcceEEEEEc---------cCCCEEECCEEecceeEEEE
Confidence 5 78888888865 534 5887732 35566777777766656544
No 65
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=96.16 E-value=0.12 Score=44.87 Aligned_cols=116 Identities=9% Similarity=0.115 Sum_probs=75.6
Q ss_pred EEEeceecEEEEeEEEEcCCCC--CCCCeeeecCcccEEEEeeEEccCCceEEecCCcEeEEEEeeEEcCCCeEEEEecc
Q 040962 25 ISLYGCHKVSIDNIKITAPYQS--PNTDGIKIGDSKGIKITHSSIGTGDDCIALLSGSTNINVTDVTCGPGHGISVGSLG 102 (247)
Q Consensus 25 i~~~~~~nv~i~n~~I~~~~~~--~n~DGidi~~s~nV~I~n~~i~~~DD~i~i~s~~~nV~I~nc~~~~~~gi~igs~g 102 (247)
+.+ ..++++++|++|.|.... +..-++.+. ++++.+++|.|....|.+-...+ + -.+++|.+.+.-.+-+|.
T Consensus 89 v~v-~a~~f~~~nlt~~Nt~g~~~~qAvAl~v~-~d~~~f~~c~f~g~QDTLy~~~~-r-~~~~~c~I~G~vDFIfG~-- 162 (319)
T 1gq8_A 89 VAA-VGAGFLARDITFQNTAGAAKHQAVALRVG-SDLSAFYRCDILAYQDSLYVHSN-R-QFFINCFIAGTVDFIFGN-- 162 (319)
T ss_dssp EEE-CSTTCEEEEEEEEECCCGGGCCCCSEEEC-CTTEEEEEEEEECSTTCEEECSS-E-EEEESCEEEESSSCEEES--
T ss_pred EEE-ECCCEEEEEeEeEccCCCcCCceEEEEec-CCcEEEEEeEECccceeeeecCc-c-EEEEecEEEeeeeEEecC--
Confidence 444 468899999999986421 223466664 58899999999988888888763 3 489999998664555553
Q ss_pred ccCCCCcEEEEEEEeeEEeCCc----eeEEEEEecCCCCceEEcEEEEeEEEeCCC
Q 040962 103 RYANERNVHGLAVRNCTFRGTT----NGVRIKTWASPQANVASGFTFENIFMSNVE 154 (247)
Q Consensus 103 ~~~~~~~i~nI~v~ni~~~~~~----~gi~ik~~~~~~~g~i~nI~f~ni~~~~~~ 154 (247)
....|+||.+.... ..-.|..........-....|.|+++....
T Consensus 163 --------~~a~f~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~ 210 (319)
T 1gq8_A 163 --------AAVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATS 210 (319)
T ss_dssp --------CEEEEESCEEEECCCSTTCCEEEEEECCCSTTCCCEEEEESCEEEECT
T ss_pred --------CcEEEEeeEEEEecCCCCCceEEEeCCCCCCCCCceEEEECCEEecCC
Confidence 12788888887532 112343332111233456788999887643
No 66
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=96.08 E-value=0.041 Score=47.70 Aligned_cols=134 Identities=13% Similarity=0.107 Sum_probs=92.6
Q ss_pred EEccEEEEeeEEeCCCC------cEEEEeceecEEEEeEEEEcCCCCCCCCeeeecCcccEEEEeeEEccCCceEEecCC
Q 040962 6 FVTNSRISGITSVNSKN------AHISLYGCHKVSIDNIKITAPYQSPNTDGIKIGDSKGIKITHSSIGTGDDCIALLSG 79 (247)
Q Consensus 6 ~~~nv~i~giti~n~~~------~~i~~~~~~nv~i~n~~I~~~~~~~n~DGidi~~s~nV~I~n~~i~~~DD~i~i~s~ 79 (247)
..++++++||+|.|... -+|.+ .++++.+.+|+|.... |++-....+ ..+++|+|...-|-|- +.
T Consensus 92 ~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~Q-----DTLy~~~~r-~~~~~c~I~G~vDFIf-G~- 162 (319)
T 1gq8_A 92 VGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILAYQ-----DSLYVHSNR-QFFINCFIAGTVDFIF-GN- 162 (319)
T ss_dssp CSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEECST-----TCEEECSSE-EEEESCEEEESSSCEE-ES-
T ss_pred ECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECccc-----eeeeecCcc-EEEEecEEEeeeeEEe-cC-
Confidence 47899999999999742 35666 5799999999999865 467776655 5999999998777764 33
Q ss_pred cEeEEEEeeEEcCC------Ce-EEEEeccccCCCCcEEEEEEEeeEEeCCce--------eEEEEEecCCCCceEEcEE
Q 040962 80 STNINVTDVTCGPG------HG-ISVGSLGRYANERNVHGLAVRNCTFRGTTN--------GVRIKTWASPQANVASGFT 144 (247)
Q Consensus 80 ~~nV~I~nc~~~~~------~g-i~igs~g~~~~~~~i~nI~v~ni~~~~~~~--------gi~ik~~~~~~~g~i~nI~ 144 (247)
-...+++|.+..- .+ |.--+. .....-....|.||++..... ..+++=-+ +....+.
T Consensus 163 -~~a~f~~c~i~~~~~~~~~~~~itA~~r---~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW----~~~sr~v 234 (319)
T 1gq8_A 163 -AAVVLQDCDIHARRPGSGQKNMVTAQGR---TDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPW----KEYSRTV 234 (319)
T ss_dssp -CEEEEESCEEEECCCSTTCCEEEEEECC---CSTTCCCEEEEESCEEEECTTTGGGGGGSCEEEECCS----STTCEEE
T ss_pred -CcEEEEeeEEEEecCCCCCceEEEeCCC---CCCCCCceEEEECCEEecCCCccccccceeEEecccC----CCcceEE
Confidence 3599999998631 22 333211 123446789999999986542 24554212 2335789
Q ss_pred EEeEEEeCCCcc
Q 040962 145 FENIFMSNVENP 156 (247)
Q Consensus 145 f~ni~~~~~~~~ 156 (247)
|.+..|...=.|
T Consensus 235 ~~~t~~~~~I~p 246 (319)
T 1gq8_A 235 VMQSSITNVINP 246 (319)
T ss_dssp EESCEECTTBCT
T ss_pred EEeccCCCcccc
Confidence 999999875333
No 67
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=95.86 E-value=0.036 Score=48.01 Aligned_cols=115 Identities=11% Similarity=0.116 Sum_probs=67.6
Q ss_pred EEEeceecEEEEeEEEEcCCCC--CCCCeeeecCcccEEEEeeEEccCCceEEecCCcEeEEEEeeEEcCCCeEEEEecc
Q 040962 25 ISLYGCHKVSIDNIKITAPYQS--PNTDGIKIGDSKGIKITHSSIGTGDDCIALLSGSTNINVTDVTCGPGHGISVGSLG 102 (247)
Q Consensus 25 i~~~~~~nv~i~n~~I~~~~~~--~n~DGidi~~s~nV~I~n~~i~~~DD~i~i~s~~~nV~I~nc~~~~~~gi~igs~g 102 (247)
+.+ ..++++++|++|.|.... +..-++.+. ++++.+++|.|....|.+-..++ + -.+++|.+.+.-.+-+|.
T Consensus 85 v~v-~a~~f~~~~lt~~Nt~g~~~~qAvAl~v~-~d~~~f~~c~f~g~QDTLy~~~~-r-~~~~~c~I~G~vDFIfG~-- 158 (317)
T 1xg2_A 85 LAA-VGQGFILQDICIQNTAGPAKDQAVALRVG-ADMSVINRCRIDAYQDTLYAHSQ-R-QFYRDSYVTGTVDFIFGN-- 158 (317)
T ss_dssp EEE-CSTTCEEESCEEEECCCGGGCCCCSEEEC-CTTEEEESCEEECSTTCEEECSS-E-EEEESCEEEESSSCEEEC--
T ss_pred EEE-ECCCEEEEEeEEecccCCccCceEEEEEe-CCcEEEEEeEeCccccceeecCc-c-EEEEeeEEEeceeEEcCC--
Confidence 444 567888888888885321 223356664 47788888888877777777663 3 377888887654454553
Q ss_pred ccCCCCcEEEEEEEeeEEeCCc----eeEEEEEecCCCCceEEcEEEEeEEEeCC
Q 040962 103 RYANERNVHGLAVRNCTFRGTT----NGVRIKTWASPQANVASGFTFENIFMSNV 153 (247)
Q Consensus 103 ~~~~~~~i~nI~v~ni~~~~~~----~gi~ik~~~~~~~g~i~nI~f~ni~~~~~ 153 (247)
....|+||.+.... ..-.|..........-....|.|+++...
T Consensus 159 --------~~avf~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~ 205 (317)
T 1xg2_A 159 --------AAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIAS 205 (317)
T ss_dssp --------CEEEEESCEEEECCCSTTCCEEEEEECCCCTTSCCEEEEESCEEEEC
T ss_pred --------ceEEEeeeEEEEeccCCCCccEEEecCcCCCCCCcEEEEECCEEecC
Confidence 12677777776432 11133332211122334567777777654
No 68
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=95.86 E-value=0.12 Score=44.79 Aligned_cols=76 Identities=13% Similarity=0.065 Sum_probs=37.1
Q ss_pred EEccEEEEeeEEeCCCC------cEEEEeceecEEEEeEEEEcCCCCCCCCeeeecCcccEEEEeeEEccCCceEEecCC
Q 040962 6 FVTNSRISGITSVNSKN------AHISLYGCHKVSIDNIKITAPYQSPNTDGIKIGDSKGIKITHSSIGTGDDCIALLSG 79 (247)
Q Consensus 6 ~~~nv~i~giti~n~~~------~~i~~~~~~nv~i~n~~I~~~~~~~n~DGidi~~s~nV~I~n~~i~~~DD~i~i~s~ 79 (247)
..++++++||+|.|... -+|.+ .++++.+.||.|.... |++-....+ -.+++|+|...-|-|- +.
T Consensus 88 ~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~Q-----DTLy~~~~r-~~~~~c~I~G~vDFIf-G~- 158 (317)
T 1xg2_A 88 VGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDAYQ-----DTLYAHSQR-QFYRDSYVTGTVDFIF-GN- 158 (317)
T ss_dssp CSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEECST-----TCEEECSSE-EEEESCEEEESSSCEE-EC-
T ss_pred ECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCccc-----cceeecCcc-EEEEeeEEEeceeEEc-CC-
Confidence 34555666666655421 23443 3455566666665543 234444333 2556666654444432 22
Q ss_pred cEeEEEEeeEEc
Q 040962 80 STNINVTDVTCG 91 (247)
Q Consensus 80 ~~nV~I~nc~~~ 91 (247)
-...+++|.+.
T Consensus 159 -~~avf~~c~i~ 169 (317)
T 1xg2_A 159 -AAVVFQKCQLV 169 (317)
T ss_dssp -CEEEEESCEEE
T ss_pred -ceEEEeeeEEE
Confidence 13555666554
No 69
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=95.09 E-value=0.98 Score=35.86 Aligned_cols=55 Identities=20% Similarity=0.294 Sum_probs=34.8
Q ss_pred ecEEEEeEEEEcCCCCCCCCeeeecCcccEEEEeeEEc-cCCceEEecCCcEeEEEEeeEEcC
Q 040962 31 HKVSIDNIKITAPYQSPNTDGIKIGDSKGIKITHSSIG-TGDDCIALLSGSTNINVTDVTCGP 92 (247)
Q Consensus 31 ~nv~i~n~~I~~~~~~~n~DGidi~~s~nV~I~n~~i~-~~DD~i~i~s~~~nV~I~nc~~~~ 92 (247)
...+++|+.|-.+ ..||||..+ +-+|+|++.. .+.|++.+|+ +..++|.+.-...
T Consensus 52 ~GaTLkNvIIG~~----~~dGIHC~G--~ctl~NVwwedVcEDA~T~kg-~g~~~I~GGgA~~ 107 (196)
T 3t9g_A 52 KGANLKNVIIGAP----GCDGIHCYG--DNVVENVVWEDVGEDALTVKS-EGVVEVIGGSAKE 107 (196)
T ss_dssp TTCEEEEEEECSC----CTTCEEECS--SEEEEEEEESSCCSCSEEECS-SEEEEEESCEEEE
T ss_pred CCCEEEEEEECCC----CcCcEEEcC--CEeEEEEEeeeeeceeeEEcC-CCeEEEECCCccC
Confidence 4677777777543 356788765 4677777764 3677888875 4455555554443
No 70
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=94.51 E-value=0.073 Score=49.02 Aligned_cols=59 Identities=15% Similarity=0.124 Sum_probs=29.4
Q ss_pred ccEEEEeeEEeCCCC----c------EEEEeceecEEEEeEEEEcCCCCCCCCeee-------ecCcccEEEEeeEEcc
Q 040962 8 TNSRISGITSVNSKN----A------HISLYGCHKVSIDNIKITAPYQSPNTDGIK-------IGDSKGIKITHSSIGT 69 (247)
Q Consensus 8 ~nv~i~giti~n~~~----~------~i~~~~~~nv~i~n~~I~~~~~~~n~DGid-------i~~s~nV~I~n~~i~~ 69 (247)
++++|+||+|.++.. + .+.+. .++++|++++|...... +.-.+. + ..++.+|++|.|..
T Consensus 94 ~~v~i~GL~i~~~~~~~~~~~~~~~~~iav~-G~~~~I~nn~I~~~~~g-d~i~i~~~~~~~~l-~g~~n~I~~N~I~G 169 (506)
T 1dbg_A 94 EHLILEGIWFKDGNRAIQAWKSHGPGLVAIY-GSYNRITACVFDCFDEA-NSAYITTSLTEDGK-VPQHCRIDHCSFTD 169 (506)
T ss_dssp SSEEEESCEEEEECCCTTTCCTTSCCSEEEC-SSSCEEESCEEESCCSS-CSCSEEECCCTTCC-CCCSCEEESCEEEC
T ss_pred CCEEEECeEEECCCcceeeeecccccceEEe-cCCeEEEeeEEEcCCCC-ceeeEeecccceee-eccccEEECcEEEC
Confidence 566677777766532 1 11222 35666777777664321 111122 2 23455667666654
No 71
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=94.31 E-value=1.1 Score=39.47 Aligned_cols=35 Identities=6% Similarity=0.023 Sum_probs=14.7
Q ss_pred ccEEEEeeEEccCCceEEecCCcEeEEEEeeEEcCC
Q 040962 58 KGIKITHSSIGTGDDCIALLSGSTNINVTDVTCGPG 93 (247)
Q Consensus 58 ~nV~I~n~~i~~~DD~i~i~s~~~nV~I~nc~~~~~ 93 (247)
+++.+++|.|...-|.+-... .....+++|++.+.
T Consensus 166 D~~~f~~C~f~G~QDTLy~~~-~gr~yf~~c~I~Gt 200 (364)
T 3uw0_A 166 DKARFKAVKLEGYQDTLYSKT-GSRSYFSDCEISGH 200 (364)
T ss_dssp EEEEEEEEEEECSBSCEEECT-TCEEEEESCEEEES
T ss_pred CeEEEEeeEEEecccceEeCC-CCCEEEEcCEEEcC
Confidence 444444444444444443331 12344444444433
No 72
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=94.28 E-value=0.45 Score=41.55 Aligned_cols=114 Identities=11% Similarity=0.115 Sum_probs=77.4
Q ss_pred EEEeceecEEEEeEEEEcCCC--------------C--CCCCee--eecCcccEEEEeeEEccCCceEEecCCcEeEEEE
Q 040962 25 ISLYGCHKVSIDNIKITAPYQ--------------S--PNTDGI--KIGDSKGIKITHSSIGTGDDCIALLSGSTNINVT 86 (247)
Q Consensus 25 i~~~~~~nv~i~n~~I~~~~~--------------~--~n~DGi--di~~s~nV~I~n~~i~~~DD~i~i~s~~~nV~I~ 86 (247)
+.+ .+++++++||+|.|... . ...-++ .+ .++++.+++|.|...-|.+-...+ ...++
T Consensus 91 v~v-~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v-~~d~~~f~~c~f~G~QDTLy~~~g--r~~~~ 166 (342)
T 2nsp_A 91 ITI-SAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTK-SGDRAYFKDVSLVGYQATLYVSGG--RSFFS 166 (342)
T ss_dssp EEE-CSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECT-TCBSEEEEEEEEECSTTCEEECSS--EEEEE
T ss_pred EEE-ECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEee-ccCcEEEEeeEEecccceEEECCC--CEEEE
Confidence 444 57999999999999641 0 112245 33 468999999999988888888763 79999
Q ss_pred eeEEcCCCeEEEEeccccCCCCcEEEEEEEeeEEeCCce---e-----EEEEEecCCCCceEEcEEEEeEEEeCC
Q 040962 87 DVTCGPGHGISVGSLGRYANERNVHGLAVRNCTFRGTTN---G-----VRIKTWASPQANVASGFTFENIFMSNV 153 (247)
Q Consensus 87 nc~~~~~~gi~igs~g~~~~~~~i~nI~v~ni~~~~~~~---g-----i~ik~~~~~~~g~i~nI~f~ni~~~~~ 153 (247)
||++.+.-.+=+|. -...|+||.+..... + -.|..... ....=..+.|.|++++..
T Consensus 167 ~c~I~G~vDFIFG~----------a~a~f~~c~i~~~~~~~~~~~~~~g~ItA~~~-~~~~~~G~vf~~c~i~~~ 230 (342)
T 2nsp_A 167 DCRISGTVDFIFGD----------GTALFNNCDLVSRYRADVKSGNVSGYLTAPST-NINQKYGLVITNSRVIRE 230 (342)
T ss_dssp SCEEEESEEEEEES----------SEEEEESCEEEECCCTTSCTTSCCEEEEEECC-BTTCSCCEEEESCEEEES
T ss_pred cCEEEeceEEEeCC----------ceEEEecCEEEEecCcccccccCceEEEccCC-CCCCCCEEEEEcCEEecC
Confidence 99999776676664 237899999875321 0 24443211 112223478999999865
No 73
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=94.11 E-value=0.73 Score=40.17 Aligned_cols=136 Identities=13% Similarity=0.090 Sum_probs=87.9
Q ss_pred EEEccEEEEeeEEeCCCC------------------c--EEEE-eceecEEEEeEEEEcCCCCCCCCeeeecCcccEEEE
Q 040962 5 NFVTNSRISGITSVNSKN------------------A--HISL-YGCHKVSIDNIKITAPYQSPNTDGIKIGDSKGIKIT 63 (247)
Q Consensus 5 ~~~~nv~i~giti~n~~~------------------~--~i~~-~~~~nv~i~n~~I~~~~~~~n~DGidi~~s~nV~I~ 63 (247)
...+++++++|+|.|... . +|.+ ..++++.+.+|.|....| ++-... .+..++
T Consensus 93 v~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G~QD-----TLy~~~-gr~~~~ 166 (342)
T 2nsp_A 93 ISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQA-----TLYVSG-GRSFFS 166 (342)
T ss_dssp ECSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEECSTT-----CEEECS-SEEEEE
T ss_pred EECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEecccc-----eEEECC-CCEEEE
Confidence 357899999999998751 1 3422 468999999999999654 566655 469999
Q ss_pred eeEEccCCceEEecCCcEeEEEEeeEEcCC---C-------e-EEEEeccccCCCCcEEEEEEEeeEEeCCc-----eeE
Q 040962 64 HSSIGTGDDCIALLSGSTNINVTDVTCGPG---H-------G-ISVGSLGRYANERNVHGLAVRNCTFRGTT-----NGV 127 (247)
Q Consensus 64 n~~i~~~DD~i~i~s~~~nV~I~nc~~~~~---~-------g-i~igs~g~~~~~~~i~nI~v~ni~~~~~~-----~gi 127 (247)
+|+|...=|-| .+. -...+++|.+..- . | |.--+. ....-.-..|.||++.... ...
T Consensus 167 ~c~I~G~vDFI-FG~--a~a~f~~c~i~~~~~~~~~~~~~~g~ItA~~~----~~~~~~G~vf~~c~i~~~~~~~~~~~~ 239 (342)
T 2nsp_A 167 DCRISGTVDFI-FGD--GTALFNNCDLVSRYRADVKSGNVSGYLTAPST----NINQKYGLVITNSRVIRESDSVPAKSY 239 (342)
T ss_dssp SCEEEESEEEE-EES--SEEEEESCEEEECCCTTSCTTSCCEEEEEECC----BTTCSCCEEEESCEEEESSTTSCTTCE
T ss_pred cCEEEeceEEE-eCC--ceEEEecCEEEEecCcccccccCceEEEccCC----CCCCCCEEEEEcCEEecCCCCCccccE
Confidence 99999776655 333 2599999998631 0 3 322211 1223456899999998652 235
Q ss_pred EEEEecCCCC----------ceEEcEEEEeEEEeCC
Q 040962 128 RIKTWASPQA----------NVASGFTFENIFMSNV 153 (247)
Q Consensus 128 ~ik~~~~~~~----------g~i~nI~f~ni~~~~~ 153 (247)
+++=-+++.+ ..+..++|.+..|...
T Consensus 240 yLGRpW~~~s~~~~~~~a~p~~~~r~vf~~t~~~~~ 275 (342)
T 2nsp_A 240 GLGRPWHPTTTFSDGRYADPNAIGQTVFLNTSMDNH 275 (342)
T ss_dssp EEECCCCCEEEETTEEEECTTBCCEEEEESCEECTT
T ss_pred EEEeccccccccccccccCCccceeEEEEccccCcc
Confidence 5552222100 1122788888888864
No 74
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=92.84 E-value=1.5 Score=38.58 Aligned_cols=13 Identities=15% Similarity=0.054 Sum_probs=6.8
Q ss_pred cEeEEEEeeEEcC
Q 040962 80 STNINVTDVTCGP 92 (247)
Q Consensus 80 ~~nV~I~nc~~~~ 92 (247)
.....+.||.|.+
T Consensus 165 ~D~~~f~~C~f~G 177 (364)
T 3uw0_A 165 SDKARFKAVKLEG 177 (364)
T ss_dssp CEEEEEEEEEEEC
T ss_pred CCeEEEEeeEEEe
Confidence 3455555555544
No 75
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=89.77 E-value=6 Score=31.44 Aligned_cols=53 Identities=28% Similarity=0.419 Sum_probs=32.1
Q ss_pred ecEEEEeEEEEcCCCCCCCCeeeecCcccEEEEeeEEc-cCCceEEecCCcEeEEEEeeEE
Q 040962 31 HKVSIDNIKITAPYQSPNTDGIKIGDSKGIKITHSSIG-TGDDCIALLSGSTNINVTDVTC 90 (247)
Q Consensus 31 ~nv~i~n~~I~~~~~~~n~DGidi~~s~nV~I~n~~i~-~~DD~i~i~s~~~nV~I~nc~~ 90 (247)
+..+++|+.|-.+ ..||||..+ .-+|+|++.. .+.|++.+|+ ...++|.+.-.
T Consensus 48 ~GaTLkNvIIG~~----~~dGIHC~G--~CtleNVwwedVcEDA~T~k~-~g~~~I~GGgA 101 (197)
T 1ee6_A 48 AGASLKNVVIGAP----AADGVHCYG--DCTITNVIWEDVGEDALTLKS-SGTVNISGGAA 101 (197)
T ss_dssp TTEEEEEEEECSS----CTTCEEEES--CEEEEEEEESSCCSCSEEEEE-SEEEEEESCEE
T ss_pred CCCEEEEEEEcCC----CcccEEEcC--ceeEEEEEeeeccccccEEcC-CCeEEEECCCc
Confidence 4677777777543 356777765 3677777765 3567777774 33444444433
No 76
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=88.94 E-value=4.8 Score=35.14 Aligned_cols=81 Identities=20% Similarity=0.266 Sum_probs=55.2
Q ss_pred cccEEEEeeEEcc-CCceEEecCC-----------------------cEeEEEEeeEEcCCCeEEEEeccccCCCCcEEE
Q 040962 57 SKGIKITHSSIGT-GDDCIALLSG-----------------------STNINVTDVTCGPGHGISVGSLGRYANERNVHG 112 (247)
Q Consensus 57 s~nV~I~n~~i~~-~DD~i~i~s~-----------------------~~nV~I~nc~~~~~~gi~igs~g~~~~~~~i~n 112 (247)
+-|..+|+...-+ -.|++.+++. -.|=+|+|....++-|+.+|..|+ .+.++|
T Consensus 269 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gsLGVG~GMDG~---G~YVSN 345 (559)
T 2vfm_A 269 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMDGK---GMYVSN 345 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEEECCSCSSSCCSCCTTSCCTTTSCTTCCCCCCEEEEEEEECCSSEEEEEEEE---SCEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecCC---CceEee
Confidence 5677888877544 4788888773 267788888888877777766542 456888
Q ss_pred EEEEeeEEeCCceeEEEEEecCCCCceEEcEEEEeEEEeCC
Q 040962 113 LAVRNCTFRGTTNGVRIKTWASPQANVASGFTFENIFMSNV 153 (247)
Q Consensus 113 I~v~ni~~~~~~~gi~ik~~~~~~~g~i~nI~f~ni~~~~~ 153 (247)
|++++| ...|..+-++.. +|.||++-.+
T Consensus 346 itv~DC----AGsG~~~~t~~~---------~FtNi~vID~ 373 (559)
T 2vfm_A 346 ITVEDC----AGSGAYLLTHES---------VFTNIAIIDT 373 (559)
T ss_dssp EEEESC----SSEEEEEEEESC---------EEEEEEEESC
T ss_pred eEehhc----cCcceEEeeccc---------eeeeeEEEec
Confidence 888887 335666655432 6777777654
No 77
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=88.45 E-value=4.7 Score=35.17 Aligned_cols=81 Identities=21% Similarity=0.277 Sum_probs=55.6
Q ss_pred cccEEEEeeEEcc-CCceEEecCC-----------------------cEeEEEEeeEEcCCCeEEEEeccccCCCCcEEE
Q 040962 57 SKGIKITHSSIGT-GDDCIALLSG-----------------------STNINVTDVTCGPGHGISVGSLGRYANERNVHG 112 (247)
Q Consensus 57 s~nV~I~n~~i~~-~DD~i~i~s~-----------------------~~nV~I~nc~~~~~~gi~igs~g~~~~~~~i~n 112 (247)
+-|..+|+...-+ -.|++.+++. -.|=+|+|....++-|+.+|..|+ .+.++|
T Consensus 272 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gsLGVG~GMDG~---G~YVSN 348 (559)
T 2v5i_A 272 NYNLQFRDSVALSPVWDGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMNSLGVGLGMDGS---GGYVSN 348 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEECCSSCTTCCSSSCTTSCCTTTSCTTCCCCCCEEEEEEEESCSSEEEEEEEE---SCEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecCC---CceEee
Confidence 5677888877544 4788888773 267788888888877777766542 456888
Q ss_pred EEEEeeEEeCCceeEEEEEecCCCCceEEcEEEEeEEEeCC
Q 040962 113 LAVRNCTFRGTTNGVRIKTWASPQANVASGFTFENIFMSNV 153 (247)
Q Consensus 113 I~v~ni~~~~~~~gi~ik~~~~~~~g~i~nI~f~ni~~~~~ 153 (247)
|++++| ...|..+-++.. +|.||++-.+
T Consensus 349 itv~DC----AGsG~~~~t~~~---------~FtNi~vID~ 376 (559)
T 2v5i_A 349 VTVQDC----AGAGMLAHTYNR---------VFSNITVIDC 376 (559)
T ss_dssp EEEESC----SSEEEEEEEESC---------EEEEEEEESC
T ss_pred eEehhc----cCcceEEeeccc---------eeeeeEEEec
Confidence 888887 345666655432 6777777654
No 78
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=87.84 E-value=8.8 Score=30.39 Aligned_cols=107 Identities=13% Similarity=0.165 Sum_probs=68.7
Q ss_pred ccEEEEeeEEeCCCCcEEEEeceecEEEEeEEEEcCCCCCCCCeeeecCcccEEEEeeEEccCCceEEecCCcEeEEEEe
Q 040962 8 TNSRISGITSVNSKNAHISLYGCHKVSIDNIKITAPYQSPNTDGIKIGDSKGIKITHSSIGTGDDCIALLSGSTNINVTD 87 (247)
Q Consensus 8 ~nv~i~giti~n~~~~~i~~~~~~nv~i~n~~I~~~~~~~n~DGidi~~s~nV~I~n~~i~~~DD~i~i~s~~~nV~I~n 87 (247)
++.+|+++.|-.+...++|... +-+++|+....- -.|++.+.++..++|.+.-.+..+|-|-=-.+.-.+.|+|
T Consensus 52 ~GaTLkNvIIG~~~~dGIHC~G--~ctl~NVwwedV----cEDA~T~kg~g~~~I~GGgA~~A~DKV~Q~Ng~Gtv~I~n 125 (196)
T 3t9g_A 52 KGANLKNVIIGAPGCDGIHCYG--DNVVENVVWEDV----GEDALTVKSEGVVEVIGGSAKEAADKVFQLNAPCTFKVKN 125 (196)
T ss_dssp TTCEEEEEEECSCCTTCEEECS--SEEEEEEEESSC----CSCSEEECSSEEEEEESCEEEEEEEEEEEECSSEEEEEEE
T ss_pred CCCEEEEEEECCCCcCcEEEcC--CEeEEEEEeeee----eceeeEEcCCCeEEEECCCccCCCceEEEECCCceEEEee
Confidence 4678889999888888999863 566777765442 2467888777788888888887766553333455677777
Q ss_pred eEEcCCCeEEEEeccccCCCCcEEEEEEEeeEEeCCc
Q 040962 88 VTCGPGHGISVGSLGRYANERNVHGLAVRNCTFRGTT 124 (247)
Q Consensus 88 c~~~~~~gi~igs~g~~~~~~~i~nI~v~ni~~~~~~ 124 (247)
.+... .|--.-|-|.- ..-++|.++|+++.+..
T Consensus 126 F~~~~-~GKl~RSCGnc---~~~r~v~i~~v~~~n~k 158 (196)
T 3t9g_A 126 FTATN-IGKLVRQNGNT---TFKVVIYLEDVTLNNVK 158 (196)
T ss_dssp EEEEE-EEEEEEECTTC---CSCEEEEEEEEEEEEEE
T ss_pred EEEcc-CCEEEEcCCCC---CceeEEEEeCeEEeCCE
Confidence 77642 33222233311 12367777777776543
No 79
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=87.00 E-value=16 Score=32.58 Aligned_cols=82 Identities=12% Similarity=0.112 Sum_probs=37.8
Q ss_pred EEccEEEEeeEEeCCCC----------cEEEEeceecEEEEeEEEEcCCCCCC--CC----eeeecCcccEEEEeeEEcc
Q 040962 6 FVTNSRISGITSVNSKN----------AHISLYGCHKVSIDNIKITAPYQSPN--TD----GIKIGDSKGIKITHSSIGT 69 (247)
Q Consensus 6 ~~~nv~i~giti~n~~~----------~~i~~~~~~nv~i~n~~I~~~~~~~n--~D----Gidi~~s~nV~I~n~~i~~ 69 (247)
..+++.+++|+|.|... -.|.+ ..+...+.+|.+....|..- .. +........-..++|+|.-
T Consensus 199 ~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~v-~gDr~~fy~C~f~G~QDTLy~~~~~~~~~~~~d~~gRqyy~~CyIeG 277 (422)
T 3grh_A 199 QNNGLQLQNLTIENTLGDSVDAGNHPAVALRT-DGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEG 277 (422)
T ss_dssp CCTTCEEEEEEEEETTGGGSCSSCCCCCSEEE-CCSSEEEEEEEEECSTTCEEECCCCTTCSCCSSCCCEEEEESCEEEE
T ss_pred ECCCEEEEeeEEEeCCCCCCCCCCCceEEEEe-cCCcEEEEeeEEEeecceeeeccccccccccccccccEEEEecEEec
Confidence 34566666666665522 12333 34556666666666443110 00 0001122345566666664
Q ss_pred CCceEEecCCcEeEEEEeeEEc
Q 040962 70 GDDCIALLSGSTNINVTDVTCG 91 (247)
Q Consensus 70 ~DD~i~i~s~~~nV~I~nc~~~ 91 (247)
.=|-|- +. -...+++|.+.
T Consensus 278 tVDFIF-G~--a~AvFe~C~I~ 296 (422)
T 3grh_A 278 DVDIVS-GR--GAVVFDNTEFR 296 (422)
T ss_dssp SEEEEE-ES--SEEEEESCEEE
T ss_pred cccEEc-cC--ceEEEEeeEEE
Confidence 444332 22 24566666654
No 80
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=86.63 E-value=4.6 Score=37.05 Aligned_cols=140 Identities=4% Similarity=-0.056 Sum_probs=83.1
Q ss_pred EccEEEEeeEEe-CCCCcEEEEeceecEEEEeEEEEcCCCCCCCCeeeecCcccEEEEeeEEccC-----CceEEecCCc
Q 040962 7 VTNSRISGITSV-NSKNAHISLYGCHKVSIDNIKITAPYQSPNTDGIKIGDSKGIKITHSSIGTG-----DDCIALLSGS 80 (247)
Q Consensus 7 ~~nv~i~giti~-n~~~~~i~~~~~~nv~i~n~~I~~~~~~~n~DGidi~~s~nV~I~n~~i~~~-----DD~i~i~s~~ 80 (247)
..+.+|++=.+. +.....+....+.+.+|++=++.... .|+.+....+.+|++-.+... ..||.+.. +
T Consensus 227 s~~~~VenN~f~~~~gg~aim~skS~~n~i~~N~~~~~~-----ggi~l~~~~~s~I~~N~f~gN~~~~~~~Gi~i~~-~ 300 (506)
T 1dbg_A 227 IGRCLVDSNLFMRQDSEAEIITSKSQENVYYGNTYLNCQ-----GTMNFRHGDHQVAINNFYIGNDQRFGYGGMFVWG-S 300 (506)
T ss_dssp BCCCEEESCEEEEECSSSEEEEEESBSCEEESCEEESCS-----SEEEEEECSSCEEESCEEEECSSSSCBCCEEECS-B
T ss_pred cCCcEEECCEEEeccCcEEEEEEecCCEEEECCEEEccc-----CcEEEeecCccEEECCEEECCcCccCceEEEEEC-C
Confidence 345556553333 33445666666667778887777643 378777666667777666543 35777754 4
Q ss_pred EeEEEEeeEEcCCC--------eEEEEeccccCCCCcEEEEEEEeeEEeCCce-eEEEE----------EecCCCCceEE
Q 040962 81 TNINVTDVTCGPGH--------GISVGSLGRYANERNVHGLAVRNCTFRGTTN-GVRIK----------TWASPQANVAS 141 (247)
Q Consensus 81 ~nV~I~nc~~~~~~--------gi~igs~g~~~~~~~i~nI~v~ni~~~~~~~-gi~ik----------~~~~~~~g~i~ 141 (247)
+.+|+|-+|.... ||.|...........+++++|++.+|.+... ||.+. ...+.....=.
T Consensus 301 -~~~I~nN~f~~~~g~~~~~~~GI~i~~G~~~~~~~~~~~~~I~~Ntfi~n~~~gI~~~~~~~~~~~~~~g~~~~~~~p~ 379 (506)
T 1dbg_A 301 -RHVIACNYFELSETIKSRGNAALYLNPGAMASEHALAFDMLIANNAFINVNGYAIHFNPLDERRKEYCAANRLKFETPH 379 (506)
T ss_dssp -SCEEESCEEEESSBCGGGTSEEEEECCBCTTSTTCCCBSEEEESCEEESCSSEEEESSTTHHHHHHHHHHTTCCCBCCC
T ss_pred -CCEEECCEEECCcCccccccccEEEecCCCccccccccCcEEECCEEECCccccEEEcccccccccccccccccccCCC
Confidence 4488888876532 6666311000012346899999999999886 89887 11111112235
Q ss_pred cEEEEeEEEeCC
Q 040962 142 GFTFENIFMSNV 153 (247)
Q Consensus 142 nI~f~ni~~~~~ 153 (247)
|++|.|--+.+.
T Consensus 380 ~~~~~nN~i~~~ 391 (506)
T 1dbg_A 380 QLMLKGNLFFKD 391 (506)
T ss_dssp SEEEESCEEECC
T ss_pred cEEEEccEEEcC
Confidence 677777555544
No 81
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=86.60 E-value=7.1 Score=35.40 Aligned_cols=81 Identities=20% Similarity=0.259 Sum_probs=55.2
Q ss_pred cccEEEEeeEEcc-CCceEEecCC-----------------------cEeEEEEeeEEcCCCeEEEEeccccCCCCcEEE
Q 040962 57 SKGIKITHSSIGT-GDDCIALLSG-----------------------STNINVTDVTCGPGHGISVGSLGRYANERNVHG 112 (247)
Q Consensus 57 s~nV~I~n~~i~~-~DD~i~i~s~-----------------------~~nV~I~nc~~~~~~gi~igs~g~~~~~~~i~n 112 (247)
+-|..+|+...-+ -.|++.+++. -.|=+|+|....++-|+.+|..| .++.++|
T Consensus 376 nynlqfrds~~~~pvwdgfdlg~d~~m~pe~drpgd~p~~~yp~h~lp~nhlidn~~v~~slgvg~gmdg---~g~yvsn 452 (666)
T 2xc1_A 376 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMDG---KGMYVSN 452 (666)
T ss_dssp CBSCEEEEEEEECCSSCSEEECCSCSSCTTCCCTTSCCTTTSCTTCCCCCCEEEEEEEESCSSEEEEEEE---ESCEEEE
T ss_pred ccceeeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecC---CCceEee
Confidence 5677888877544 4788888773 26778888888887777776654 2456888
Q ss_pred EEEEeeEEeCCceeEEEEEecCCCCceEEcEEEEeEEEeCC
Q 040962 113 LAVRNCTFRGTTNGVRIKTWASPQANVASGFTFENIFMSNV 153 (247)
Q Consensus 113 I~v~ni~~~~~~~gi~ik~~~~~~~g~i~nI~f~ni~~~~~ 153 (247)
|++++| ...|..+.++.. +|.||++-.+
T Consensus 453 itv~dc----ag~g~~~~~~~~---------~ftni~vid~ 480 (666)
T 2xc1_A 453 ITVEDC----AGSGAYLLTHES---------VFTNIAIIDT 480 (666)
T ss_dssp EEEESC----SSEEEEEEEESC---------EEEEEEEESC
T ss_pred eEehhc----cCcceEEeeccc---------eeeeeEEEec
Confidence 888887 335666655432 6677776654
No 82
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=86.38 E-value=9.4 Score=34.08 Aligned_cols=114 Identities=14% Similarity=0.145 Sum_probs=76.2
Q ss_pred eceecEEEEeEEEEcCCCC------CCCCeeeecCcccEEEEeeEEccCCceEEecC----------CcEeEEEEeeEEc
Q 040962 28 YGCHKVSIDNIKITAPYQS------PNTDGIKIGDSKGIKITHSSIGTGDDCIALLS----------GSTNINVTDVTCG 91 (247)
Q Consensus 28 ~~~~nv~i~n~~I~~~~~~------~n~DGidi~~s~nV~I~n~~i~~~DD~i~i~s----------~~~nV~I~nc~~~ 91 (247)
...+++.++||+|.|.... +-.-.+.+. .+.+.+.+|.|...-|-+-... ....-.+++|++.
T Consensus 198 V~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~v~-gDr~~fy~C~f~G~QDTLy~~~~~~~~~~~~d~~gRqyy~~CyIe 276 (422)
T 3grh_A 198 SQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTD-GDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIE 276 (422)
T ss_dssp ECCTTCEEEEEEEEETTGGGSCSSCCCCCSEEEC-CSSEEEEEEEEECSTTCEEECCCCTTCSCCSSCCCEEEEESCEEE
T ss_pred EECCCEEEEeeEEEeCCCCCCCCCCCceEEEEec-CCcEEEEeeEEEeecceeeeccccccccccccccccEEEEecEEe
Confidence 3568999999999996421 122344444 4899999999999888887742 1457899999999
Q ss_pred CCCeEEEEeccccCCCCcEEEEEEEeeEEeCCce----eEEEEEecCCCCceEEcEEEEeEEEeCC
Q 040962 92 PGHGISVGSLGRYANERNVHGLAVRNCTFRGTTN----GVRIKTWASPQANVASGFTFENIFMSNV 153 (247)
Q Consensus 92 ~~~gi~igs~g~~~~~~~i~nI~v~ni~~~~~~~----gi~ik~~~~~~~g~i~nI~f~ni~~~~~ 153 (247)
+.-.+=+|. -...|++|++..... +-.|..... ....-..+.|.|++++..
T Consensus 277 GtVDFIFG~----------a~AvFe~C~I~s~~~~~~~~g~ITA~~t-~~~~~~Gfvf~nC~ita~ 331 (422)
T 3grh_A 277 GDVDIVSGR----------GAVVFDNTEFRVVNSRTQQEAYVFAPAT-LSNIYYGFLAVNSRFNAF 331 (422)
T ss_dssp ESEEEEEES----------SEEEEESCEEEECCSSCSSCCEEEEECC-BTTCCCCEEEESCEEEEC
T ss_pred ccccEEccC----------ceEEEEeeEEEEecCCCCCceEEEecCC-CCCCCCEEEEECCEEEeC
Confidence 876777763 257888998875321 223433211 112234578999999853
No 83
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=86.25 E-value=11 Score=29.89 Aligned_cols=110 Identities=15% Similarity=0.240 Sum_probs=72.9
Q ss_pred ccEEEEeeEEeCCCCcEEEEeceecEEEEeEEEEcCCCCCCCCeeeecCcccEEEEeeEEccCCceEEecCCcEeEEEEe
Q 040962 8 TNSRISGITSVNSKNAHISLYGCHKVSIDNIKITAPYQSPNTDGIKIGDSKGIKITHSSIGTGDDCIALLSGSTNINVTD 87 (247)
Q Consensus 8 ~nv~i~giti~n~~~~~i~~~~~~nv~i~n~~I~~~~~~~n~DGidi~~s~nV~I~n~~i~~~DD~i~i~s~~~nV~I~n 87 (247)
++.+|+++.|-.+...++|... +-+|+|+-...- -.|++.+.++..++|.+.-.+..+|-|-=-.+.-.+.|+|
T Consensus 48 ~GaTLkNvIIG~~~~dGIHC~G--~CtleNVwwedV----cEDA~T~k~~g~~~I~GGgA~~A~DKV~Q~Ng~Gtv~I~n 121 (197)
T 1ee6_A 48 AGASLKNVVIGAPAADGVHCYG--DCTITNVIWEDV----GEDALTLKSSGTVNISGGAAYKAYDKVFQINAAGTINIRN 121 (197)
T ss_dssp TTEEEEEEEECSSCTTCEEEES--CEEEEEEEESSC----CSCSEEEEESEEEEEESCEEEEEEEEEEEECSSEEEEEES
T ss_pred CCCEEEEEEEcCCCcccEEEcC--ceeEEEEEeeec----cccccEEcCCCeEEEECCCccCCCccEEEecCCceEEEee
Confidence 5788999999888889999875 466777765542 2466777766788888888877766554444456788888
Q ss_pred eEEcCCCeEEEEeccccCCCCcEEEEEEEeeEEeCCceeE
Q 040962 88 VTCGPGHGISVGSLGRYANERNVHGLAVRNCTFRGTTNGV 127 (247)
Q Consensus 88 c~~~~~~gi~igs~g~~~~~~~i~nI~v~ni~~~~~~~gi 127 (247)
.+.. ..|=-.-|-|.- ..-++|.++|+++.+....+
T Consensus 122 F~~~-~~GKl~RScGnc---~~~r~v~i~~v~~~~~k~~i 157 (197)
T 1ee6_A 122 FRAD-DIGKLVRQNGGT---TYKVVMNVENCNISRVKDAI 157 (197)
T ss_dssp CEEE-EEEEEEEECTTC---CSCEEEEEESCEEEEEEEEE
T ss_pred EEEc-cCCEEEEcCCCC---ccceEEEEeceEEECceEEE
Confidence 7653 233222233321 12378888888887765443
No 84
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=76.65 E-value=7.5 Score=34.54 Aligned_cols=59 Identities=12% Similarity=0.086 Sum_probs=39.1
Q ss_pred cccEEEEeeE-EccCCceEEecCC---------------------cEeEEEEeeEEcCCCeEEEEeccccCCCCcEEEEE
Q 040962 57 SKGIKITHSS-IGTGDDCIALLSG---------------------STNINVTDVTCGPGHGISVGSLGRYANERNVHGLA 114 (247)
Q Consensus 57 s~nV~I~n~~-i~~~DD~i~i~s~---------------------~~nV~I~nc~~~~~~gi~igs~g~~~~~~~i~nI~ 114 (247)
|-|..++++. |..-.|++.+++. -.|=.|+|.....+.|+.+|.-| ..+.++||+
T Consensus 262 nYnLqF~d~~~i~~~~DG~Dl~aD~g~pe~R~~D~~laqYp~~qLP~nHii~Ni~~~~~lGVG~~~DG---~~~~v~ni~ 338 (543)
T 3riq_A 262 NYRLVFDNITTIQCYYDGIDVNADTGSPTERVDDYTLAEYPWFQLPTQHIIRNIITRDCMGIGAWWDG---QKNIIDNVV 338 (543)
T ss_dssp CBSCEEEEEEEESCSSCSCEECSCCSSCCCCSSSCCTTTSCTTCCCCCCEEEEEEEESCSSCSSEECS---SSCEEEEEE
T ss_pred eeeEEEeccceEEEeecceeccCCCCCCccCCCCcchhhCchhhCchhhhhhhhheeccceeeeeecC---CCCeEeeEE
Confidence 5567777776 5556778888762 15667777777777777666544 345677777
Q ss_pred EEee
Q 040962 115 VRNC 118 (247)
Q Consensus 115 v~ni 118 (247)
+++|
T Consensus 339 ~~dc 342 (543)
T 3riq_A 339 TYEA 342 (543)
T ss_dssp EESC
T ss_pred eecc
Confidence 6666
No 85
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=66.67 E-value=32 Score=29.49 Aligned_cols=13 Identities=31% Similarity=0.447 Sum_probs=6.1
Q ss_pred cEEEEeEEEeCCC
Q 040962 142 GFTFENIFMSNVE 154 (247)
Q Consensus 142 nI~f~ni~~~~~~ 154 (247)
+|+++||++.+++
T Consensus 167 dvsv~~i~fsn~~ 179 (542)
T 2x3h_A 167 DVTVSDVNFSNVK 179 (542)
T ss_dssp EEEEEEEEEEEEC
T ss_pred cceEeeeeeeecC
Confidence 4444444444443
No 86
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=57.28 E-value=68 Score=28.57 Aligned_cols=110 Identities=15% Similarity=0.187 Sum_probs=61.6
Q ss_pred eceecEEEEeEEEEcCCCCCCCCeeeecC----------------------cccEEEEeeEEccCCceEEecCC-----c
Q 040962 28 YGCHKVSIDNIKITAPYQSPNTDGIKIGD----------------------SKGIKITHSSIGTGDDCIALLSG-----S 80 (247)
Q Consensus 28 ~~~~nv~i~n~~I~~~~~~~n~DGidi~~----------------------s~nV~I~n~~i~~~DD~i~i~s~-----~ 80 (247)
.+|-|+.+++.....+.| ||||+.+ -.|-.|+|+..+..- +|-+.-. .
T Consensus 260 sRnYnLqF~d~~~i~~~~----DG~Dl~aD~g~pe~R~~D~~laqYp~~qLP~nHii~Ni~~~~~l-GVG~~~DG~~~~v 334 (543)
T 3riq_A 260 ARNYRLVFDNITTIQCYY----DGIDVNADTGSPTERVDDYTLAEYPWFQLPTQHIIRNIITRDCM-GIGAWWDGQKNII 334 (543)
T ss_dssp CCCBSCEEEEEEEESCSS----CSCEECSCCSSCCCCSSSCCTTTSCTTCCCCCCEEEEEEEESCS-SCSSEECSSSCEE
T ss_pred cceeeEEEeccceEEEee----cceeccCCCCCCccCCCCcchhhCchhhCchhhhhhhhheeccc-eeeeeecCCCCeE
Confidence 357789999998888765 6676653 135567777766321 1111111 3
Q ss_pred EeEEEEeeEEcCCCeEEEEeccccCCCCcEEEEEEEeeEEe----------CCc--eeEEEEEecCCCCc---eEEcEEE
Q 040962 81 TNINVTDVTCGPGHGISVGSLGRYANERNVHGLAVRNCTFR----------GTT--NGVRIKTWASPQAN---VASGFTF 145 (247)
Q Consensus 81 ~nV~I~nc~~~~~~gi~igs~g~~~~~~~i~nI~v~ni~~~----------~~~--~gi~ik~~~~~~~g---~i~nI~f 145 (247)
+||++++|. +.|+-+.+ ....++||++=++.-. +.. +|++|+..+. .| ..-|=++
T Consensus 335 ~ni~~~dca---g~G~~~~~-----~~~~ftNitvI~~N~~~~~~nQI~i~G~~~vnGi~I~~~~~--~G~~I~APnStv 404 (543)
T 3riq_A 335 DNVVTYEAH---KEGMFDRG-----TNNDITNITVVCANKDLTNLNQIVCEGGSRLRGIMVHAYTT--QGYAVYAPSSEV 404 (543)
T ss_dssp EEEEEESCS---SCSEEECS-----SSCEEEEEEEESCSTTCSSCCSEEECSCCEEEEEEEECSSC--SSCSEEEEEEEE
T ss_pred eeEEeeccc---cCcceeec-----cCcceeeEEEEeccccCCCcceEEEecCcEecceEeeccCC--CceEEECCCccc
Confidence 566666553 33443432 2245677776544222 211 5899887764 23 2346677
Q ss_pred EeEEEeC
Q 040962 146 ENIFMSN 152 (247)
Q Consensus 146 ~ni~~~~ 152 (247)
++++...
T Consensus 405 S~i~g~v 411 (543)
T 3riq_A 405 SNVSCAG 411 (543)
T ss_dssp EEEEECT
T ss_pred cccccCC
Confidence 7777665
No 87
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=53.16 E-value=41 Score=29.36 Aligned_cols=70 Identities=20% Similarity=0.171 Sum_probs=45.9
Q ss_pred cEeEEEEeeEEcCC--CeEEEEeccc---------------cCCCCcEEEEEEEeeEEeCCceeEEEEEecCCCCceEEc
Q 040962 80 STNINVTDVTCGPG--HGISVGSLGR---------------YANERNVHGLAVRNCTFRGTTNGVRIKTWASPQANVASG 142 (247)
Q Consensus 80 ~~nV~I~nc~~~~~--~gi~igs~g~---------------~~~~~~i~nI~v~ni~~~~~~~gi~ik~~~~~~~g~i~n 142 (247)
..|+.+++...-.. +|+-+|+... |+...--.|=.+.|+.+.++- |+.++... ++++|+|
T Consensus 269 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gsL-GVG~GMDG--~G~YVSN 345 (559)
T 2vfm_A 269 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGAL-GVGFGMDG--KGMYVSN 345 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEEECCSCSSSCCSCCTTSCCTTTSCTTCCCCCCEEEEEEEECCS-SEEEEEEE--ESCEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeeccc-ceeeeecC--CCceEee
Confidence 48899999876543 6888887411 111122356678888887764 55555443 4799999
Q ss_pred EEEEeEEEeC
Q 040962 143 FTFENIFMSN 152 (247)
Q Consensus 143 I~f~ni~~~~ 152 (247)
|++++|...+
T Consensus 346 itv~DCAGsG 355 (559)
T 2vfm_A 346 ITVEDCAGSG 355 (559)
T ss_dssp EEEESCSSEE
T ss_pred eEehhccCcc
Confidence 9999876443
No 88
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=49.02 E-value=42 Score=29.32 Aligned_cols=70 Identities=17% Similarity=0.148 Sum_probs=45.7
Q ss_pred cEeEEEEeeEEcCC--CeEEEEeccc---------------cCCCCcEEEEEEEeeEEeCCceeEEEEEecCCCCceEEc
Q 040962 80 STNINVTDVTCGPG--HGISVGSLGR---------------YANERNVHGLAVRNCTFRGTTNGVRIKTWASPQANVASG 142 (247)
Q Consensus 80 ~~nV~I~nc~~~~~--~gi~igs~g~---------------~~~~~~i~nI~v~ni~~~~~~~gi~ik~~~~~~~g~i~n 142 (247)
..|+.+++...-.. +|+-+|+... |+...--.|=.+.|+.+.++- |+.++... ++++|+|
T Consensus 272 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gsL-GVG~GMDG--~G~YVSN 348 (559)
T 2v5i_A 272 NYNLQFRDSVALSPVWDGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMNSL-GVGLGMDG--SGGYVSN 348 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEECCSSCTTCCSSSCTTSCCTTTSCTTCCCCCCEEEEEEEESCS-SEEEEEEE--ESCEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeeccc-ceeeeecC--CCceEee
Confidence 48899999875543 5888887411 111122356678888887764 55555443 4799999
Q ss_pred EEEEeEEEeC
Q 040962 143 FTFENIFMSN 152 (247)
Q Consensus 143 I~f~ni~~~~ 152 (247)
|++++|...+
T Consensus 349 itv~DCAGsG 358 (559)
T 2v5i_A 349 VTVQDCAGAG 358 (559)
T ss_dssp EEEESCSSEE
T ss_pred eEehhccCcc
Confidence 9999876443
No 89
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=45.45 E-value=62 Score=29.43 Aligned_cols=70 Identities=20% Similarity=0.171 Sum_probs=46.2
Q ss_pred cEeEEEEeeEEcCC--CeEEEEeccc---------------cCCCCcEEEEEEEeeEEeCCceeEEEEEecCCCCceEEc
Q 040962 80 STNINVTDVTCGPG--HGISVGSLGR---------------YANERNVHGLAVRNCTFRGTTNGVRIKTWASPQANVASG 142 (247)
Q Consensus 80 ~~nV~I~nc~~~~~--~gi~igs~g~---------------~~~~~~i~nI~v~ni~~~~~~~gi~ik~~~~~~~g~i~n 142 (247)
..|+.+++...-.. +|+-+|+... |+...--.|=.+.|+.+.++- |+.++... ++++|+|
T Consensus 376 nynlqfrds~~~~pvwdgfdlg~d~~m~pe~drpgd~p~~~yp~h~lp~nhlidn~~v~~sl-gvg~gmdg--~g~yvsn 452 (666)
T 2xc1_A 376 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGAL-GVGFGMDG--KGMYVSN 452 (666)
T ss_dssp CBSCEEEEEEEECCSSCSEEECCSCSSCTTCCCTTSCCTTTSCTTCCCCCCEEEEEEEESCS-SEEEEEEE--ESCEEEE
T ss_pred ccceeeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeeccc-ceeeeecC--CCceEee
Confidence 48899999886543 6898887411 111122346678888887764 55555443 4799999
Q ss_pred EEEEeEEEeC
Q 040962 143 FTFENIFMSN 152 (247)
Q Consensus 143 I~f~ni~~~~ 152 (247)
|++++|...+
T Consensus 453 itv~dcag~g 462 (666)
T 2xc1_A 453 ITVEDCAGSG 462 (666)
T ss_dssp EEEESCSSEE
T ss_pred eEehhccCcc
Confidence 9999876443
No 90
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=40.98 E-value=1.7e+02 Score=25.08 Aligned_cols=53 Identities=9% Similarity=0.041 Sum_probs=38.9
Q ss_pred ecEEEEeEEEEcCCCCCCCCeeeec-CcccEEEEeeEEc-cCCceEEecCCcEeEEEEeeEEc
Q 040962 31 HKVSIDNIKITAPYQSPNTDGIKIG-DSKGIKITHSSIG-TGDDCIALLSGSTNINVTDVTCG 91 (247)
Q Consensus 31 ~nv~i~n~~I~~~~~~~n~DGidi~-~s~nV~I~n~~i~-~~DD~i~i~s~~~nV~I~nc~~~ 91 (247)
+..+++|+.|-.+ ..||||.. + +-+|+|++.. .+.|++.+|++ .+.|.+.-..
T Consensus 158 ~GatlkNvIiG~~----~~dGIHC~~G--~CtleNVwwedVcEDA~T~kg~--~~~I~GGgA~ 212 (344)
T 3b4n_A 158 NATVKNLRISASG----GADGIHCDSG--NCTIENVIWEDICEDAATNNGK--TMTIVGGIAH 212 (344)
T ss_dssp SCEEEEEEECTTC----CTTCEEEEES--EEEEEEEEESSCSSCSEEECSS--EEEEESCEEE
T ss_pred cCcEEEEEEecCC----CccceEEccC--CeeEEEEeehhcccccceecCc--eEEEECchhc
Confidence 3578888888443 46899987 5 5889999886 47899999953 5666665543
No 91
>2jrw_A Cyclic extended PEP.1; acetylcholine receptor, phage display, peptide cyclization, immune system; NMR {Synthetic}
Probab=21.64 E-value=29 Score=17.39 Aligned_cols=9 Identities=33% Similarity=0.881 Sum_probs=5.2
Q ss_pred CcccCCCCC
Q 040962 239 GTQKPPSCL 247 (247)
Q Consensus 239 ~~~~p~~~~ 247 (247)
---+|+||.
T Consensus 16 pyhppppc~ 24 (26)
T 2jrw_A 16 PYHPPPPCX 24 (26)
T ss_dssp SCCSCSCC-
T ss_pred CCCCCCCCC
Confidence 345777874
Done!