BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040978
(104 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q99PI8|RTN4R_MOUSE Reticulon-4 receptor OS=Mus musculus GN=Rtn4r PE=2 SV=1
Length = 473
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 3 AEFNSFNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRD-GSKLLQSMGSFPS 61
A F LE LD+S N ++V P + GL L +L L R G+R+ G L + + +
Sbjct: 99 AAFTGLTLLEQLDLSDNAQLHVVDPTTFHGLGHLHTLHLDRCGLRELGPGLFRGLA---A 155
Query: 62 LNNLYLSSNNFTETVTITTQELHNFTNLEYLKLNDSP 98
L LYL NN T ++L N T+L +L N P
Sbjct: 156 LQYLYLQDNNLQALPDNTFRDLGNLTHL-FLHGNRIP 191
Score = 32.7 bits (73), Expect = 0.73, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 20/104 (19%)
Query: 9 NNLELL-DMSFNEINNLV-----------VPQ-GYSGLRKLKSLDLSRVGV-RDGSKLLQ 54
NNL+ L D +F ++ NL VP+ + GL L L L + V R +
Sbjct: 164 NNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFR 223
Query: 55 SMGSFPSLNNLYLSSNNFTETVTITTQELHNFTNLEYLKLNDSP 98
+G L LYL +NN + + + L +L+YL+LND+P
Sbjct: 224 DLGR---LMTLYLFANNLS---MLPAEVLMPLRSLQYLRLNDNP 261
>sp|Q99M75|RTN4R_RAT Reticulon-4 receptor OS=Rattus norvegicus GN=Rtn4r PE=1 SV=2
Length = 473
Score = 42.4 bits (98), Expect = 9e-04, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 3 AEFNSFNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRD-GSKLLQSMGSFPS 61
A F LE LD+S N +V P + GL L +L L R G+++ G L + + +
Sbjct: 99 AAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAA--- 155
Query: 62 LNNLYLSSNNFTETVTITTQELHNFTNLEYLKLNDSP 98
L LYL NN T ++L N T+L +L N P
Sbjct: 156 LQYLYLQDNNLQALPDNTFRDLGNLTHL-FLHGNRIP 191
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 20/104 (19%)
Query: 9 NNLELL-DMSFNEINNLV-----------VPQ-GYSGLRKLKSLDLSRVGV-RDGSKLLQ 54
NNL+ L D +F ++ NL VP+ + GL L L L + V R +
Sbjct: 164 NNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFR 223
Query: 55 SMGSFPSLNNLYLSSNNFTETVTITTQELHNFTNLEYLKLNDSP 98
+G L LYL +NN + + + L +L+YL+LND+P
Sbjct: 224 DLGR---LMTLYLFANNLS---MLPAEVLVPLRSLQYLRLNDNP 261
>sp|Q6ZSA7|LRC55_HUMAN Leucine-rich repeat-containing protein 55 OS=Homo sapiens GN=LRRC55
PE=1 SV=2
Length = 311
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 5 FNSFNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFPSLNN 64
F + L +D+S N V PQ + GL +L+ LDLS G+ S L+++ P L
Sbjct: 146 FQEAHGLVHIDLSHNPWLRRVHPQAFQGLMQLRDLDLSYGGLAFLS--LEALEGLPGLVT 203
Query: 65 LYLSSNNFTETVTI 78
L + N + T+
Sbjct: 204 LQIGGNPWVCGCTM 217
>sp|C0LGF5|Y1341_ARATH Probable LRR receptor-like serine/threonine-protein kinase
At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2
Length = 1072
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 14 LDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFPSLNNLYLSSNNFT 73
LD+S+N +P+ +S L +L+SLDLS + K+L S+ S SLN +S NNF+
Sbjct: 602 LDLSYNTFTG-NIPETFSDLTQLQSLDLSSNSLHGDIKVLGSLTSLASLN---ISCNNFS 657
Query: 74 ETVTIT 79
+ T
Sbjct: 658 GPIPST 663
>sp|Q99467|CD180_HUMAN CD180 antigen OS=Homo sapiens GN=CD180 PE=1 SV=2
Length = 661
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 5 FNSFNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLLQ-SMGSFPSLN 63
F F L+ LD++ + L P G GL LK L LS V +L Q S +FPSL
Sbjct: 294 FQCFTQLQELDLTATHLKGL--PSGMKGLNLLKKLVLS---VNHFDQLCQISAANFPSLT 348
Query: 64 NLYLSSN 70
+LY+ N
Sbjct: 349 HLYIRGN 355
>sp|C0LGI5|Y1699_ARATH Probable LRR receptor-like serine/threonine-protein kinase
At1g69990 OS=Arabidopsis thaliana GN=At1g69990 PE=2 SV=1
Length = 591
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 19/101 (18%)
Query: 10 NLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFPS-------L 62
+L+ LD+SFN+ + L+ Q S L L +LDLS G+KL GS PS L
Sbjct: 90 SLQSLDLSFNDFSGLIPSQICSWLPYLVTLDLS------GNKL---SGSIPSQIVDCKFL 140
Query: 63 NNLYLSSNNFTETVTITTQELHNFTNLEYLKLNDSPLHISL 103
N+L L+ N T ++ EL L+ L L D+ L S+
Sbjct: 141 NSLALNQNKLTGSI---PSELTRLNRLQRLSLADNDLSGSI 178
>sp|Q7KRY7|LAP4_DROME Protein lap4 OS=Drosophila melanogaster GN=scrib PE=1 SV=1
Length = 1851
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 3 AEFNSFNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFPSL 62
A+F S LE L++ N + +L P+ S L KLK LDL + D L +G P L
Sbjct: 146 ADFGSLTQLESLELRENLLKHL--PETISQLTKLKRLDLGDNEIED---LPPYLGYLPGL 200
Query: 63 NNLYLSSNNFTETVTITTQELHNFTNLEYLKLND 96
+ L+L N EL T L YL +++
Sbjct: 201 HELWLDHNQLQR----LPPELGLLTKLTYLDVSE 230
>sp|Q9TTN0|TLR4_PANPA Toll-like receptor 4 OS=Pan paniscus GN=TLR4 PE=3 SV=1
Length = 839
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 5 FNSFNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFPSLNN 64
FN ++LE+L M+ N +P ++ LR L LDLS+ + S + S SL
Sbjct: 467 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSP--TAFNSLSSLQV 524
Query: 65 LYLSSNNFTETVTITTQELHNFTNLEY 91
L +S NNF T + L++ L+Y
Sbjct: 525 LNMSHNNFFSLDTFPYKCLNSLQVLDY 551
>sp|O00206|TLR4_HUMAN Toll-like receptor 4 OS=Homo sapiens GN=TLR4 PE=1 SV=2
Length = 839
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 5 FNSFNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFPSLNN 64
FN ++LE+L M+ N +P ++ LR L LDLS+ + S + S SL
Sbjct: 467 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSP--TAFNSLSSLQV 524
Query: 65 LYLSSNNFTETVTITTQELHNFTNLEY 91
L +S NNF T + L++ L+Y
Sbjct: 525 LNMSHNNFFSLDTFPYKCLNSLQVLDY 551
>sp|Q8SPE8|TLR4_GORGO Toll-like receptor 4 OS=Gorilla gorilla gorilla GN=TLR4 PE=3 SV=1
Length = 837
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 5 FNSFNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFPSLNN 64
FN ++LE+L M+ N +P ++ LR L LDLS+ + S + S SL
Sbjct: 465 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSP--TAFNSLSSLQV 522
Query: 65 LYLSSNNFTETVTITTQELHNFTNLEY 91
L +S NNF T + L++ L+Y
Sbjct: 523 LNMSHNNFFSLDTFPYKCLNSLRVLDY 549
>sp|P49606|CYAA_USTMA Adenylate cyclase OS=Ustilago maydis (strain 521 / FGSC 9021) GN=UAC1
PE=3 SV=1
Length = 2493
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 3 AEFNSFNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFPSL 62
AE + NLE ++ NE+ L P S L L+++DL R V+D S LL P L
Sbjct: 1243 AEIANLINLERFILAGNELEKL--PDSMSELVSLRTIDLRRNKVQDVSSLL----GLPRL 1296
Query: 63 NNLYLSSNNF 72
N+ SNN
Sbjct: 1297 QNIQAESNNI 1306
>sp|Q9FII5|TDR_ARATH Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis
thaliana GN=TDR PE=1 SV=1
Length = 1041
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 5 FNSFNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFPSLNN 64
+++ +L+LLD S N+++ +P G+S L+ L L L + ++ + +G P L
Sbjct: 293 YSNLKSLKLLDFSSNQLSG-SIPSGFSTLKNLTWLSL--ISNNLSGEVPEGIGELPELTT 349
Query: 65 LYLSSNNFT 73
L+L +NNFT
Sbjct: 350 LFLWNNNFT 358
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 26 VPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFPSLNNLYLSSNNFTETVTITTQELHN 85
+P Y GL++LK + L+ G G KL +G L ++ + N+F + E
Sbjct: 193 IPAAYGGLQRLKFIHLA--GNVLGGKLPPRLGLLTELQHMEIGYNHFNGNI---PSEFAL 247
Query: 86 FTNLEYLKLNDSPLHISL 103
+NL+Y +++ L SL
Sbjct: 248 LSNLKYFDVSNCSLSGSL 265
>sp|Q5FVQ9|TBCE_RAT Tubulin-specific chaperone E OS=Rattus norvegicus GN=Tbce PE=2 SV=1
Length = 524
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 12/95 (12%)
Query: 8 FNNLELLDMSFNEINNLVVPQGYSGLRK----LKSLDLSRVGVRDGSKLLQSMGSFPSLN 63
+LE LD+S N++ P L + LK+L L++ G+ +++L S+P L
Sbjct: 178 LKDLEALDLSENKLQ---FPSDSPTLTRTFSTLKTLVLNKTGI-TWTEVLHCAPSWPVLQ 233
Query: 64 NLYLSSNNFTETVTITTQELHNFTNLEYLKLNDSP 98
LYL SN ++I+ + ++ NL L L+ +P
Sbjct: 234 ELYLKSNG----ISISERPVNALQNLRLLDLSSNP 264
>sp|Q9M5J9|PGIP1_ARATH Polygalacturonase inhibitor 1 OS=Arabidopsis thaliana GN=PGIP1 PE=2
SV=1
Length = 330
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 10 NLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFP-SLNNLYLS 68
NLE L++SFN+++ +P S L K+ +L+LSR + + +S GSFP ++ +L LS
Sbjct: 144 NLEFLELSFNDLSG-SIPSSLSTLPKILALELSRNKLT--GSIPESFGSFPGTVPDLRLS 200
Query: 69 SNNFTETV 76
N + +
Sbjct: 201 HNQLSGPI 208
>sp|Q5U508|TBCE_XENLA Tubulin-specific chaperone E OS=Xenopus laevis GN=tbce PE=2 SV=1
Length = 522
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 10 NLELLDMSFNEINNLVVPQG-YSGLRKLKSLDLSRVGVRDGSKLLQSMGSFPSLNNLYLS 68
NL LD+S N++N P + LK L L+R G++ +++LQ +P+L L+L
Sbjct: 175 NLTSLDLSENKLNPSSNPSSLATSFCNLKVLSLNRTGMK-WNEILQCASMWPALEELHLV 233
Query: 69 SNNFTETVTITTQELHNFTNLEYLKLND 96
SN+ +++ Q ++N NL L +++
Sbjct: 234 SND----ISLLEQPVNNLQNLTILDISN 257
>sp|O82318|Y2579_ARATH Probably inactive leucine-rich repeat receptor-like protein kinase
At2g25790 OS=Arabidopsis thaliana GN=At2g25790 PE=1 SV=1
Length = 960
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 11 LELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFPSLNNLYLSSN 70
LE+LD+S N+ + +S ++LK LDLSR + + Q + +FP + +L LS N
Sbjct: 457 LEMLDLSVNKFFGEL--PDFSRSKRLKKLDLSRNKI--SGVVPQGLMTFPEIMDLDLSEN 512
Query: 71 NFTETVTITTQELHNFTNLE 90
T + N NL+
Sbjct: 513 EITGVIPRELSSCKNLVNLD 532
>sp|O94769|ECM2_HUMAN Extracellular matrix protein 2 OS=Homo sapiens GN=ECM2 PE=2 SV=1
Length = 699
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 5 FNSFNNLELLDMSFNEI-NNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFPS-L 62
FN NLE LD+S N I ++ + P+ + L+KL L++ DG+ L+Q PS L
Sbjct: 363 FNGLPNLERLDLSKNNITSSGIGPKAFKLLKKLMRLNM------DGNNLIQIPSQLPSTL 416
Query: 63 NNLYLSSNNFTETVTITTQELHNFTNLE 90
L ++ NN + +L+ LE
Sbjct: 417 EELKVNENNLQAIDEESLSDLNQLVTLE 444
>sp|Q3UQ28|PXDN_MOUSE Peroxidasin homolog OS=Mus musculus GN=Pxdn PE=2 SV=2
Length = 1475
Score = 32.7 bits (73), Expect = 0.63, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 10/98 (10%)
Query: 5 FNSFNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDL--SRVGVRDGSKLLQSMGSFPSL 62
F NL+ L + NEI + + Q + GL L+ L L +++ D +S P L
Sbjct: 103 FEDLENLKYLYLYKNEIQS-IDRQAFKGLASLEQLYLHFNQIETLDP----ESFQHLPKL 157
Query: 63 NNLYLSSNNFTETVTITTQELHNFTNLEYLKLNDSPLH 100
L+L +N T V T +L +++ L+L+ + LH
Sbjct: 158 ERLFLHNNRITHLVPGTFSQLE---SMKRLRLDSNALH 192
>sp|Q3URE9|LIGO2_MOUSE Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 2 OS=Mus musculus GN=Lingo2
PE=2 SV=1
Length = 606
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 11/91 (12%)
Query: 4 EFNSFNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKL-LQSMGSFPSL 62
EF S+ LE +D+S N I N V P ++ L L+SL L G++L L +G F L
Sbjct: 76 EFISYPLLEEIDLSDNIIAN-VEPGAFNNLFNLRSLRLK------GNRLKLVPLGVFTGL 128
Query: 63 NNLY---LSSNNFTETVTITTQELHNFTNLE 90
+NL +S N + Q+LHN +LE
Sbjct: 129 SNLTKLDISENKIVILLDYMFQDLHNLKSLE 159
>sp|Q5FW85|ECM2_MOUSE Extracellular matrix protein 2 OS=Mus musculus GN=Ecm2 PE=1 SV=1
Length = 670
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 5 FNSFNNLELLDMSFNEINNL-VVPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFPS-L 62
FN NLE LD+S N I + + P+ + L+KL L++ DG+ L+ PS L
Sbjct: 334 FNGLPNLERLDLSRNNITSSGIGPKAFKSLKKLMRLNM------DGNNLVHIPSDLPSTL 387
Query: 63 NNLYLSSNNFTETVTITTQELHNFTNLE 90
L ++ NN + +L+ LE
Sbjct: 388 EELKINDNNLQAIDEKSLSDLNQLVTLE 415
>sp|Q7L985|LIGO2_HUMAN Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 2 OS=Homo sapiens GN=LINGO2
PE=1 SV=1
Length = 606
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 11/91 (12%)
Query: 4 EFNSFNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKL-LQSMGSFPSL 62
EF S+ LE +D+S N I N V P ++ L L+SL L G++L L +G F L
Sbjct: 76 EFISYPLLEEIDLSDNIIAN-VEPGAFNNLFNLRSLRLK------GNRLKLVPLGVFTGL 128
Query: 63 NNLY---LSSNNFTETVTITTQELHNFTNLE 90
+NL +S N + Q+LHN +LE
Sbjct: 129 SNLTKLDISENKIVILLDYMFQDLHNLKSLE 159
>sp|Q9FL28|FLS2_ARATH LRR receptor-like serine/threonine-protein kinase FLS2
OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1
Length = 1173
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 5 FNSFNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFPSLNN 64
+ N+ LD S N ++ + + + G+ + SL+LSR ++ QS G+ L +
Sbjct: 669 LQACKNVFTLDFSQNNLSGHIPDEVFQGMDMIISLNLSRNSFS--GEIPQSFGNMTHLVS 726
Query: 65 LYLSSNNFTETVTITTQELHNFTNLEYLKL 94
L LSSNN T + + L N + L++LKL
Sbjct: 727 LDLSSNNLTGEI---PESLANLSTLKHLKL 753
>sp|Q8CIV8|TBCE_MOUSE Tubulin-specific chaperone E OS=Mus musculus GN=Tbce PE=1 SV=1
Length = 524
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 12/95 (12%)
Query: 8 FNNLELLDMSFNEINNLVVPQGYSGLRK----LKSLDLSRVGVRDGSKLLQSMGSFPSLN 63
+LE LD+S N+ L P L + LK+L L++ G+ +++L S+P L
Sbjct: 178 LKDLEALDLSENK---LQFPSDSPTLTRTFSTLKTLVLNKTGI-TWTEVLHCAPSWPVLE 233
Query: 64 NLYLSSNNFTETVTITTQELHNFTNLEYLKLNDSP 98
LYL SNN ++I+ + ++ + L L+ +P
Sbjct: 234 ELYLKSNN----ISISERPVNVLQKMRLLDLSSNP 264
>sp|Q8SPE9|TLR4_PONPY Toll-like receptor 4 OS=Pongo pygmaeus GN=TLR4 PE=3 SV=1
Length = 828
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 5 FNSFNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFPSLNN 64
FN ++L++L M+ N +P ++ LR L LDLS+ + S + S SL
Sbjct: 465 FNGLSSLKVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSP--TAFNSLSSLQV 522
Query: 65 LYLSSNNFTETVTITTQELHNFTNLEY 91
L +S NNF T + L++ L+Y
Sbjct: 523 LNMSHNNFFSLDTFPYKCLNSLQVLDY 549
>sp|Q9FZ59|PEPR2_ARATH Leucine-rich repeat receptor-like protein kinase PEPR2
OS=Arabidopsis thaliana GN=PEPR2 PE=1 SV=1
Length = 1088
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Query: 5 FNSFNNLEL--LDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFPSL 62
F S N +L LD+SFN+ V P+ L SL + + + + SMG +
Sbjct: 238 FGSSNCKKLVSLDLSFNDFQGGVPPE-IGNCSSLHSLVMVKCNLT--GTIPSSMGMLRKV 294
Query: 63 NNLYLSSNNFTETVTITTQELHNFTNLEYLKLNDSPLH 100
+ + LS N + + QEL N ++LE LKLND+ L
Sbjct: 295 SVIDLSDNRLSGNIP---QELGNCSSLETLKLNDNQLQ 329
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Query: 10 NLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLL-QSMGSFPSLNNLYLS 68
+LE LD+S N+ + VP + L+ L L L R + S L+ S+G L +L +S
Sbjct: 125 SLEYLDLSNNDFSG-EVPDIFGSLQNLTFLYLDRNNL---SGLIPASVGGLIELVDLRMS 180
Query: 69 SNNFTETVTITTQELHNFTNLEYLKLNDSPLHISL 103
NN + T+ + L N + LEYL LN++ L+ SL
Sbjct: 181 YNNLSGTIP---ELLGNCSKLEYLALNNNKLNGSL 212
>sp|C0LGV1|RCH1_ARATH LRR receptor-like serine/threonine-protein kinase RCH1
OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1
Length = 1135
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 4 EFNSFNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFPSLN 63
E ++ L++L++S N + +P S L KL+ LD+S + K+ S+G SLN
Sbjct: 510 EISNCRQLQMLNLSNNTLQG-YLPLSLSSLTKLQVLDVSSNDLT--GKIPDSLGHLISLN 566
Query: 64 NLYLSSNNFTETVTITTQELHNFTNLEYLKLN 95
L LS N+F + L + TNL+ L L+
Sbjct: 567 RLILSKNSFNGEI---PSSLGHCTNLQLLDLS 595
>sp|A0JM56|LRRC9_XENTR Leucine-rich repeat-containing protein 9 OS=Xenopus tropicalis
GN=lrrc9 PE=2 SV=2
Length = 1502
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 9/47 (19%)
Query: 2 FAEFNSFN------NLELLDMSFNEINNLVVPQGYSGLRKLKSLDLS 42
F EF+S NLE LD S N++ + +G+ GL KLK LDLS
Sbjct: 731 FNEFSSLEDVSYLTNLEYLDASHNQV---ITLEGFKGLGKLKYLDLS 774
>sp|A4IIW9|LIGO1_XENTR Leucine-rich repeat and immunoglobulin-like domain-containing nogo
receptor-interacting protein 1 OS=Xenopus tropicalis
GN=lingo1 PE=2 SV=1
Length = 606
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 4 EFNSFNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFPSLN 63
EF++F LE L+++ N I +++ P ++GL L+SL G+R L +G F L+
Sbjct: 76 EFSAFPYLEELELNEN-IVSIIEPGAFNGLFNLRSL-----GLRSNRLKLIPLGVFTGLS 129
Query: 64 NLY---LSSNNFTETVTITTQELHNFTNLE 90
NL +S N + Q+L+N +LE
Sbjct: 130 NLTQLDISENKIVILLDDMFQDLYNLKSLE 159
>sp|D4A7P2|LRRT2_RAT Leucine-rich repeat transmembrane neuronal protein 2 OS=Rattus
norvegicus GN=Lrrtm2 PE=1 SV=1
Length = 515
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 5 FNSFNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVR 47
F NL+ LD+SFN++++L P+ + GLRKL++L L +R
Sbjct: 129 FTQLINLQNLDLSFNQLSSL-HPELFYGLRKLQTLHLRSNSLR 170
>sp|Q8BGA3|LRRT2_MOUSE Leucine-rich repeat transmembrane neuronal protein 2 OS=Mus
musculus GN=Lrrtm2 PE=2 SV=1
Length = 515
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 5 FNSFNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVR 47
F NL+ LD+SFN++++L P+ + GLRKL++L L +R
Sbjct: 129 FTQLINLQNLDLSFNQLSSL-HPELFYGLRKLQTLHLRSNSLR 170
>sp|P51886|LUM_RAT Lumican OS=Rattus norvegicus GN=Lum PE=2 SV=1
Length = 338
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 8/93 (8%)
Query: 2 FAEFNSFNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFPS 61
F+ NL + + N++ V GL+ L+ LDLS SKL + + S
Sbjct: 152 LGSFDGLVNLTFIYLQHNQLKEEAVSASLKGLKSLEYLDLS---FNQMSKLPAGLPT--S 206
Query: 62 LNNLYLSSNNFTETVTITTQELHNFTNLEYLKL 94
L LYL +N T I + + FT L+YL+L
Sbjct: 207 LLTLYLDNNKIT---NIPDEYFNRFTGLQYLRL 236
>sp|Q9BGP6|LRRT3_MACFA Leucine-rich repeat transmembrane neuronal protein 3 OS=Macaca
fascicularis GN=LRRTM3 PE=2 SV=1
Length = 581
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 5 FNSFNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFP---S 61
F NLELLD+ +N I +L ++G+ +LK L L SKL ++ FP S
Sbjct: 177 FQDCRNLELLDLGYNRIRSLAR-NVFAGMIRLKELHLEH---NQFSKL--NLALFPRLVS 230
Query: 62 LNNLYLSSNNFT---ETVTITTQELHNF 86
L NLYL N + +T++ T L
Sbjct: 231 LQNLYLQWNKISVIGQTMSWTWSSLQRL 258
>sp|Q86VH5|LRRT3_HUMAN Leucine-rich repeat transmembrane neuronal protein 3 OS=Homo
sapiens GN=LRRTM3 PE=2 SV=2
Length = 581
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 5 FNSFNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFP---S 61
F NLELLD+ +N I +L ++G+ +LK L L SKL ++ FP S
Sbjct: 177 FQDCRNLELLDLGYNRIRSLAR-NVFAGMIRLKELHLEH---NQFSKL--NLALFPRLVS 230
Query: 62 LNNLYLSSNNFT---ETVTITTQELHNF 86
L NLYL N + +T++ T L
Sbjct: 231 LQNLYLQWNKISVIGQTMSWTWSSLQRL 258
>sp|O43300|LRRT2_HUMAN Leucine-rich repeat transmembrane neuronal protein 2 OS=Homo
sapiens GN=LRRTM2 PE=2 SV=3
Length = 516
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 5 FNSFNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVR 47
F NL+ LD+SFN++++L P+ + GLRKL++L L +R
Sbjct: 129 FTQLINLQNLDLSFNQLSSL-HPELFYGLRKLQTLHLRSNSLR 170
>sp|Q15404|RSU1_HUMAN Ras suppressor protein 1 OS=Homo sapiens GN=RSU1 PE=1 SV=3
Length = 277
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 8 FNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFPSLNNLYL 67
NLE+L+ N+I L P S L+KLK L+L G+ + L + GS P+L L L
Sbjct: 62 LKNLEVLNFFNNQIEEL--PTQISSLQKLKHLNL---GMNRLNTLPRGFGSLPALEVLDL 116
Query: 68 SSNNFTE 74
+ NN +E
Sbjct: 117 TYNNLSE 123
>sp|Q9R1B9|SLIT2_MOUSE Slit homolog 2 protein OS=Mus musculus GN=Slit2 PE=2 SV=2
Length = 1521
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Query: 5 FNSFNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGS-FPSLN 63
F+ + L LD+S N+I+ L P + GLR L SL L G+K+ + S F L
Sbjct: 320 FSPYKKLRRLDLSNNQISEL-APDAFQGLRSLNSLVLY------GNKITELPKSLFEGLF 372
Query: 64 NLYLSSNNFTETVTITTQELHNFTNLEYLKLNDSPLH 100
+L L N + + + NL L L D+ L
Sbjct: 373 SLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ 409
>sp|A4IGL7|PXDN_XENTR Peroxidasin OS=Xenopus tropicalis GN=pxdn PE=2 SV=1
Length = 1457
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 5 FNSFNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFPSLNN 64
F NL+ L + NEI + + Q + GL L+ L L + +S P L
Sbjct: 96 FKDLENLKYLYLYKNEIQS-IDRQAFKGLASLEQLYLHFNQIETLEP--ESFNYLPKLER 152
Query: 65 LYLSSNNFTETVTITTQELHNFTNLEYLKLNDSPLH 100
L+L +N T V T +L +++ L+L+ + LH
Sbjct: 153 LFLHNNRITHLVPGTFSQLE---SMKRLRLDSNALH 185
>sp|Q42371|ERECT_ARATH LRR receptor-like serine/threonine-protein kinase ERECTA
OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1
Length = 976
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 3 AEFNSFNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSR---VGVRDGSKLLQSMGSF 59
E + NL+ LD+S N+IN ++P L L ++LSR GV G G+
Sbjct: 421 VELSRIGNLDTLDLSNNKING-IIPSSLGDLEHLLKMNLSRNHITGVVPG-----DFGNL 474
Query: 60 PSLNNLYLSSNNFTETVTITTQELHNFTNLEYLKL 94
S+ + LS+N+ + + +EL+ N+ L+L
Sbjct: 475 RSIMEIDLSNNDISGPI---PEELNQLQNIILLRL 506
>sp|Q6GPJ5|LRC40_XENLA Leucine-rich repeat-containing protein 40 OS=Xenopus laevis
GN=lrrc40 PE=2 SV=1
Length = 605
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 14/93 (15%)
Query: 5 FNSFNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFPSLNN 64
+ ++L +L++ +N++ V+P+ S L+ L+ LDLS D L ++GS P+L +
Sbjct: 285 LQNLSSLSVLELRYNKLK--VLPKEISLLKGLERLDLSN---NDIGSLPDTLGSLPNLKS 339
Query: 65 LYLSSNNF----TETVTITTQELHNFTNLEYLK 93
L L N + + TQEL L+YLK
Sbjct: 340 LQLDGNPLRGIRRDILNKGTQEL-----LKYLK 367
>sp|Q13045|FLII_HUMAN Protein flightless-1 homolog OS=Homo sapiens GN=FLII PE=1 SV=2
Length = 1269
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 26 VPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFPSLNNLYLSSNNFTETVTITTQELH 84
+P GL L +DLS D +++ + + + PSL L LSSN TE Q +H
Sbjct: 215 LPTSLEGLSNLADVDLS---CNDLTRVPECLYTLPSLRRLNLSSNQITELSLCIDQWVH 270
>sp|Q9ZWC8|BRL1_ARATH Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana
GN=BRL1 PE=1 SV=1
Length = 1166
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 5 FNSFNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFPSLNN 64
+ + L++L++ N I +P + GL+ + LDLS ++ L S+GS L++
Sbjct: 659 YGNMGYLQVLNLGHNRITG-TIPDSFGGLKAIGVLDLSHNNLQ--GYLPGSLGSLSFLSD 715
Query: 65 LYLSSNNFTETVTITTQ 81
L +S+NN T + Q
Sbjct: 716 LDVSNNNLTGPIPFGGQ 732
>sp|Q9SGP2|HSL1_ARATH Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1
PE=2 SV=1
Length = 996
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 8 FNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFPSLNNLYL 67
+NL L + N IN+ +P + + L++LDLS+ + +L Q++ P+L +L L
Sbjct: 83 LSNLAHLSLYNNSINS-TLPLNIAACKSLQTLDLSQNLLT--GELPQTLADIPTLVHLDL 139
Query: 68 SSNNFTETVTITTQELHNFTNLEYLKL 94
+ NNF+ + + F NLE L L
Sbjct: 140 TGNNFSGDIPAS---FGKFENLEVLSL 163
>sp|Q9LRT1|Y3804_ARATH Probably inactive leucine-rich repeat receptor-like protein kinase
At3g28040 OS=Arabidopsis thaliana GN=At3g28040 PE=2 SV=1
Length = 1016
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 11 LELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFPSLNNLYLSSN 70
L LD+S N ++ +P G L LK L L R + L +G P LN + LSSN
Sbjct: 225 LRALDLSSNSLSG-SIPLGILSLHNLKELQLQRN--QFSGALPSDIGLCPHLNRVDLSSN 281
Query: 71 NFTETVTITTQELHNFTNLE 90
+F+ + T Q+L + + +
Sbjct: 282 HFSGELPRTLQKLKSLNHFD 301
>sp|D3ZAL8|LRRT3_RAT Leucine-rich repeat transmembrane neuronal protein 3 OS=Rattus
norvegicus GN=Lrrtm3 PE=3 SV=1
Length = 582
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 5 FNSFNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFP---S 61
F NLELLD+ +N I +L ++G+ +LK L L SKL ++ FP S
Sbjct: 177 FQDCRNLELLDLGYNRIRSLAR-NVFAGMIRLKELHLEH---NQFSKL--NLALFPRLVS 230
Query: 62 LNNLYLSSNNFT---ETVTITTQELHNF 86
L NLY+ N + +T++ T L
Sbjct: 231 LQNLYMQWNKISVIGQTMSWTWSSLQRL 258
>sp|Q8BZ81|LRRT3_MOUSE Leucine-rich repeat transmembrane neuronal protein 3 OS=Mus
musculus GN=Lrrtm3 PE=2 SV=2
Length = 582
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 5 FNSFNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFP---S 61
F NLELLD+ +N I +L ++G+ +LK L L SKL ++ FP S
Sbjct: 177 FQDCRNLELLDLGYNRIRSLAR-NVFAGMIRLKELHLEH---NQFSKL--NLALFPRLVS 230
Query: 62 LNNLYLSSNNFT---ETVTITTQELHNF 86
L NLY+ N + +T++ T L
Sbjct: 231 LQNLYMQWNKISVIGQTMSWTWSSLQRL 258
>sp|A4IIK1|MFHA1_XENTR Malignant fibrous histiocytoma-amplified sequence 1 homolog
OS=Xenopus tropicalis GN=mfhas1 PE=2 SV=1
Length = 997
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 10 NLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFPSLNNLYLSS 69
+LE LD+SFN+I +L P GL L++LDL + Q + P+L L S
Sbjct: 148 DLEELDVSFNQITHL--PDTMQGLPSLRTLDLDH---NELCSFPQQLFHVPALEELDFSG 202
Query: 70 NNF 72
N
Sbjct: 203 NKM 205
>sp|Q6ZRR7|LRRC9_HUMAN Leucine-rich repeat-containing protein 9 OS=Homo sapiens GN=LRRC9
PE=2 SV=2
Length = 1453
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 9/47 (19%)
Query: 2 FAEFNSFN------NLELLDMSFNEINNLVVPQGYSGLRKLKSLDLS 42
F EF + NLE LD S N + L +G+ GL KLK LDLS
Sbjct: 725 FNEFTCLDDVYHLYNLEYLDASHNHVITL---EGFRGLMKLKHLDLS 768
>sp|Q5E9C0|RSU1_BOVIN Ras suppressor protein 1 OS=Bos taurus GN=RSU1 PE=2 SV=1
Length = 277
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 8 FNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFPSLNNLYL 67
NLE+L+ N+I L P S L+KLK L+L G+ + L + GS P+L L L
Sbjct: 62 LKNLEVLNFFNNQIEEL--PTQISSLQKLKHLNL---GMNRLNTLPRGFGSLPALEVLDL 116
Query: 68 SSNNFTE 74
+ NN E
Sbjct: 117 TYNNLNE 123
>sp|A7SFP1|SHOC2_NEMVE Leucine-rich repeat protein soc-2 homolog OS=Nematostella vectensis
GN=v1g189306 PE=3 SV=1
Length = 577
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 52/105 (49%), Gaps = 22/105 (20%)
Query: 10 NLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVG----------VRDGSKL-LQS--M 56
NLE+L +S N + L P+G LRKL+ LD+ +R +L LQS +
Sbjct: 412 NLEVLILSNNLLKKL--PRGIGALRKLRVLDIEENKLESIPTEIEYLRSLERLVLQSNCL 469
Query: 57 GSFPSLNNLYLSSNNF-----TETVTITTQELHNFTNLEYLKLND 96
GS P YLSS + E V++ QE+ N +LE L LND
Sbjct: 470 GSLPRSIG-YLSSVTYLSVGENELVSV-PQEIGNMESLEQLYLND 512
>sp|P58727|TLR4_FELCA Toll-like receptor 4 OS=Felis catus GN=TLR4 PE=2 SV=1
Length = 833
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 5 FNSFNNLELLDMSFNEINNLVVPQGYSGLRKLKSLDLSRVGVRDGSKLLQSMGSFPSLNN 64
FN +L++L M+ N + +P + L L LDLS + S++ + S P L
Sbjct: 467 FNGLISLQILKMAGNSFQDNFLPNIFMELTNLTILDLSDCQLEQVSQV--AFNSLPKLQL 524
Query: 65 LYLSSNNFTETVTITTQELHNFTNLE 90
L +S N+ T+ + LH+ L+
Sbjct: 525 LNMSHNHLLSLDTLPYEPLHSLQTLD 550
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,409,690
Number of Sequences: 539616
Number of extensions: 1293401
Number of successful extensions: 4802
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 316
Number of HSP's that attempted gapping in prelim test: 4438
Number of HSP's gapped (non-prelim): 677
length of query: 104
length of database: 191,569,459
effective HSP length: 73
effective length of query: 31
effective length of database: 152,177,491
effective search space: 4717502221
effective search space used: 4717502221
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)