Query 040981
Match_columns 211
No_of_seqs 154 out of 1442
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 03:39:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040981.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040981hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gd8_A Aquaporin-4; proton exc 100.0 6.7E-53 2.3E-57 341.0 16.2 209 1-209 7-222 (223)
2 3llq_A Aquaporin Z 2; aquapori 100.0 2.4E-52 8.2E-57 342.7 17.0 210 1-211 33-256 (256)
3 2o9g_A Aquaporin Z; integral m 100.0 3E-52 1E-56 339.6 17.1 210 1-211 8-233 (234)
4 3iyz_A Aquaporin-4; water tran 100.0 1.3E-51 4.5E-56 348.0 19.2 210 1-210 55-271 (340)
5 2zz9_A Aquaporin-4; water tran 100.0 3.4E-51 1.2E-55 342.7 18.9 209 1-209 16-231 (301)
6 1j4n_A Aquaporin 1; membrane p 100.0 3.4E-51 1.2E-55 339.7 18.7 210 1-210 14-235 (271)
7 2w2e_A AQY1, aquaporin, aquapo 100.0 5E-51 1.7E-55 339.4 18.2 208 1-210 48-266 (279)
8 2b6o_A Aquaporin-0, lens fiber 100.0 2E-50 7E-55 333.7 21.1 209 1-210 13-225 (263)
9 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 4.9E-51 1.7E-55 337.6 16.4 209 1-210 15-228 (266)
10 3cn5_A Aquaporin; membrane pro 100.0 3E-51 1E-55 343.7 14.6 210 1-210 64-289 (304)
11 2f2b_A Aquaporin AQPM; protein 100.0 1.4E-50 5E-55 332.2 18.2 210 1-210 8-246 (246)
12 1ldf_A Glycerol uptake facilit 100.0 3E-50 1E-54 336.0 14.3 210 1-210 11-257 (281)
13 3c02_A Aquaglyceroporin; membr 100.0 4.6E-50 1.6E-54 331.1 11.4 209 1-209 13-243 (258)
14 2b6o_A Aquaporin-0, lens fiber 99.6 5.1E-16 1.7E-20 128.0 6.5 99 112-210 8-110 (263)
15 2zz9_A Aquaporin-4; water tran 99.5 1.3E-14 4.3E-19 121.4 8.0 99 112-210 11-117 (301)
16 3llq_A Aquaporin Z 2; aquapori 99.5 5.4E-15 1.8E-19 121.0 5.5 99 111-209 27-132 (256)
17 3d9s_A Aquaporin-5, AQP-5; aqu 99.5 5.9E-15 2E-19 121.7 4.6 99 112-210 10-112 (266)
18 2f2b_A Aquaporin AQPM; protein 99.5 4.7E-14 1.6E-18 115.3 9.6 94 1-98 147-245 (246)
19 2o9g_A Aquaporin Z; integral m 99.5 9.8E-15 3.4E-19 118.4 5.3 98 113-210 4-108 (234)
20 3gd8_A Aquaporin-4; proton exc 99.5 9.1E-15 3.1E-19 117.8 4.8 98 113-210 3-108 (223)
21 3iyz_A Aquaporin-4; water tran 99.5 1.3E-14 4.6E-19 122.4 4.3 99 112-210 50-156 (340)
22 3c02_A Aquaglyceroporin; membr 99.5 1.8E-14 6.3E-19 118.4 4.3 99 112-210 8-112 (258)
23 1ldf_A Glycerol uptake facilit 99.5 2.2E-14 7.5E-19 119.3 4.7 99 112-210 6-110 (281)
24 1j4n_A Aquaporin 1; membrane p 99.5 2.2E-14 7.7E-19 118.6 4.3 98 112-209 9-119 (271)
25 2w2e_A AQY1, aquaporin, aquapo 99.5 4.1E-14 1.4E-18 117.3 5.8 99 112-210 43-154 (279)
26 3cn5_A Aquaporin; membrane pro 99.5 2.2E-14 7.7E-19 120.1 3.9 99 112-210 59-166 (304)
27 3s2u_A UDP-N-acetylglucosamine 58.7 2.3 7.8E-05 35.5 0.3 20 50-69 10-29 (365)
28 3kcu_A Probable formate transp 55.5 44 0.0015 27.0 7.6 98 33-134 71-182 (285)
29 3kly_A Putative formate transp 30.3 1.2E+02 0.004 24.4 6.2 98 33-134 70-181 (280)
No 1
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=6.7e-53 Score=341.03 Aligned_cols=209 Identities=28% Similarity=0.477 Sum_probs=181.1
Q ss_pred ChhHHHHHHHHHHHHhhhhhhccc---cCCccchhHHHHHHHHHHHHHHHhCCcCcccccHHHHHHHHHhcCccccchhH
Q 040981 1 MIAELIGTYFIIFAGCGAVAVDKI---YGKVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPGVTIALAIFRQFKWRQVPL 77 (211)
Q Consensus 1 ~~aEf~GT~~lv~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~~~~~~~~~~~ 77 (211)
+++||+||++|+++++++.....+ .+..++..++++||+++.+.+++++++||||+|||||+++++.||+++++.+.
T Consensus 7 ~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~ 86 (223)
T 3gd8_A 7 VTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVF 86 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCCHHHHHH
Confidence 369999999999999988764221 12456788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCccc---cccccccCCchhHHHHHHHHHHHHHHHHhhheecCCc-CCCchhHHHHHHH
Q 040981 78 YIVAQVVGSLLASGTLSLMLDVTPQA---YFGTVPVGSNAQSFVAEIIISFLLMFVISGAVTDDRA-IGQFGGVAVGMTI 153 (211)
Q Consensus 78 yi~aQ~~Ga~~g~~~~~~~~~~~~~~---~~~~~p~~s~~~~~~~E~~~t~~l~~~~~~~~~~~~~-~~~~~~~~ig~~v 153 (211)
|+++|++|+++|+.+++.+++++... ...+.|+.+..++++.|+++|++|+++++...+++|. .+...|+.+|+.+
T Consensus 87 Yi~AQ~lGA~~ga~lv~~~~~~~~~~~lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~~~~~pl~iGl~v 166 (223)
T 3gd8_A 87 YIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIALAIGFSV 166 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHTCTTCSCCCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHHhccccCCccCCccHHHHHHH
Confidence 99999999999999999988654221 1223455688899999999999999999997554443 2457899999999
Q ss_pred HHHHHHhcCCcccccchHhhHHHHHhhccCCceeeeeechhHHHHHHHHHHHhhhc
Q 040981 154 MLNVFVAGPISGASMNPARSIGPAIVKHKFRGIWLYIIGPVIGTVTGGFAYNLIKI 209 (211)
Q Consensus 154 ~~~~~~~~~~tG~~~NPA~~~g~~i~~~~~~~~~vy~v~p~~Ga~la~~~~~~~~~ 209 (211)
.+.+...++.||+++|||||||||++.++|+++|+||++|++|+++++++||+++.
T Consensus 167 ~~~~~~g~~~TG~a~NPAR~~GP~l~~~~w~~~Wvy~vgP~~Ga~la~~~y~~~~~ 222 (223)
T 3gd8_A 167 AIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVFC 222 (223)
T ss_dssp HHHHHHHHHHHCCCCCHHHHHHHHHHHTCCTTTTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhccCCccccccHHHHHHHHHHhcCCCcEEeehhHHHHHHHHHHHHHHHHcC
Confidence 88887777899999999999999999999999999999999999999999999875
No 2
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=2.4e-52 Score=342.71 Aligned_cols=210 Identities=30% Similarity=0.625 Sum_probs=182.9
Q ss_pred ChhHHHHHHHHHHHHhhhhhhccc--cCCccchhHHHHHHHHHHHHHHHhCCcCcccccHHHHHHHHHhcCccccchhHH
Q 040981 1 MIAELIGTYFIIFAGCGAVAVDKI--YGKVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPGVTIALAIFRQFKWRQVPLY 78 (211)
Q Consensus 1 ~~aEf~GT~~lv~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~~~~~~~~~~~y 78 (211)
+++||+||++|++++|++...+.. ....+++.++++||+++++.+++++++||||+|||||+++++.|+++|++.+.|
T Consensus 33 ~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Y 112 (256)
T 3llq_A 33 LLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGRFPASSLVPY 112 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGGGHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcCCCHHHHHHH
Confidence 479999999999999998764432 224567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCc--c-------cccccccc-CCchhHHHHHHHHHHHHHHHHhhheecCCcCCCchhHH
Q 040981 79 IVAQVVGSLLASGTLSLMLDVTP--Q-------AYFGTVPV-GSNAQSFVAEIIISFLLMFVISGAVTDDRAIGQFGGVA 148 (211)
Q Consensus 79 i~aQ~~Ga~~g~~~~~~~~~~~~--~-------~~~~~~p~-~s~~~~~~~E~~~t~~l~~~~~~~~~~~~~~~~~~~~~ 148 (211)
+++|++||++|+.+++.++++.. + ....+.|. .+..++++.|+++|++|+++++.. .|+|+.+...|+.
T Consensus 113 iiAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~~~~~~t~p~~~s~~~~f~~E~i~Tf~Lv~~il~~-~d~~~~~~~~pl~ 191 (256)
T 3llq_A 113 VIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGS-THGRVPAGFAPIA 191 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTBTTCCCTTTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHH-HSTTSCTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCcccccccccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHHh-cCCCCCccchhHH
Confidence 99999999999999999885321 1 12234564 378899999999999999999986 4555556789999
Q ss_pred HHHHHHHHHHHhcCCcccccchHhhHHHHHhhc--cCCceeeeeechhHHHHHHHHHHHhhhcCC
Q 040981 149 VGMTIMLNVFVAGPISGASMNPARSIGPAIVKH--KFRGIWLYIIGPVIGTVTGGFAYNLIKIHG 211 (211)
Q Consensus 149 ig~~v~~~~~~~~~~tG~~~NPA~~~g~~i~~~--~~~~~~vy~v~p~~Ga~la~~~~~~~~~~~ 211 (211)
+|+.+.++.+..+++||+++|||||||||++.+ +|+++|+||++|++|+++|+++|+++.+++
T Consensus 192 IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g~~~~~~~WVy~vgPi~Ga~la~~~y~~l~~~~ 256 (256)
T 3llq_A 192 IGLALTLIHLISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWKLFGEKD 256 (256)
T ss_dssp HHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCHHHHHHTTHHHHHHHHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHhccccccccChHHHHHHHHHcCCCcccceeeeeeHHHHHHHHHHHHHHHhccCC
Confidence 999999999999999999999999999999975 466899999999999999999999998764
No 3
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=3e-52 Score=339.61 Aligned_cols=210 Identities=32% Similarity=0.586 Sum_probs=183.6
Q ss_pred ChhHHHHHHHHHHHHhhhhhhcccc--CCccchhHHHHHHHHHHHHHHHhCCcCcccccHHHHHHHHHhcCccccchhHH
Q 040981 1 MIAELIGTYFIIFAGCGAVAVDKIY--GKVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPGVTIALAIFRQFKWRQVPLY 78 (211)
Q Consensus 1 ~~aEf~GT~~lv~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~~~~~~~~~~~y 78 (211)
+++||+||++|++++|++...+... ...+++.++++||+++.+.+++++++||||+|||||+++++.||++|++.+.|
T Consensus 8 ~~aEf~GT~~lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Y 87 (234)
T 2o9g_A 8 LAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGY 87 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcccCCCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCCCHHHHHHH
Confidence 4799999999999999887654422 24567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCcc-----------cccccccc-CCchhHHHHHHHHHHHHHHHHhhheecCCcCCCchh
Q 040981 79 IVAQVVGSLLASGTLSLMLDVTPQ-----------AYFGTVPV-GSNAQSFVAEIIISFLLMFVISGAVTDDRAIGQFGG 146 (211)
Q Consensus 79 i~aQ~~Ga~~g~~~~~~~~~~~~~-----------~~~~~~p~-~s~~~~~~~E~~~t~~l~~~~~~~~~~~~~~~~~~~ 146 (211)
+++|++|+++|+.+++.++++.++ ....+.|. .+..++++.|+++|++|+++++... |+|..+...|
T Consensus 88 i~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~E~i~T~~Lv~~i~~~~-d~~~~~~~~p 166 (234)
T 2o9g_A 88 VIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGAT-DKFAPAGFAP 166 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHHT-STTSCTTCHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCCCccchHHHHHHHHHHHHHHHHHHHHhc-CCCCccchHH
Confidence 999999999999999999874321 12234564 3788999999999999999999874 5555567899
Q ss_pred HHHHHHHHHHHHHhcCCcccccchHhhHHHHHhhcc--CCceeeeeechhHHHHHHHHHHHhhhcCC
Q 040981 147 VAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKHK--FRGIWLYIIGPVIGTVTGGFAYNLIKIHG 211 (211)
Q Consensus 147 ~~ig~~v~~~~~~~~~~tG~~~NPA~~~g~~i~~~~--~~~~~vy~v~p~~Ga~la~~~~~~~~~~~ 211 (211)
+.+|+.+....+..+++||+++|||||||||++.++ |+++|+||++|++|+++++++||+++.++
T Consensus 167 l~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g~~~~~~~Wv~~vgP~~Ga~la~~~y~~~~~~~ 233 (234)
T 2o9g_A 167 IAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEKR 233 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCSHHHHSHHHHHHHHHHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHHccCCCccccChHHHHHHHHHhCCCCCceeeeeehHHhHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999864 55999999999999999999999988653
No 4
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=1.3e-51 Score=348.01 Aligned_cols=210 Identities=29% Similarity=0.507 Sum_probs=182.0
Q ss_pred ChhHHHHHHHHHHHHhhhhhhccc---cCCccchhHHHHHHHHHHHHHHHhCCcCcccccHHHHHHHHHhcCccccchhH
Q 040981 1 MIAELIGTYFIIFAGCGAVAVDKI---YGKVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPGVTIALAIFRQFKWRQVPL 77 (211)
Q Consensus 1 ~~aEf~GT~~lv~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~~~~~~~~~~~ 77 (211)
+++||+||++|+|++|++.+.... ....+++.++++||+++++.+++++++||||+|||||+++++.|+++|++.+.
T Consensus 55 ~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G~~~~~~~~~ 134 (340)
T 3iyz_A 55 VTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVF 134 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHcCCCCHHHHHH
Confidence 479999999999999998764321 12456788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCcccccc---ccccCCchhHHHHHHHHHHHHHHHHhhheecCCc-CCCchhHHHHHHH
Q 040981 78 YIVAQVVGSLLASGTLSLMLDVTPQAYFG---TVPVGSNAQSFVAEIIISFLLMFVISGAVTDDRA-IGQFGGVAVGMTI 153 (211)
Q Consensus 78 yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~---~~p~~s~~~~~~~E~~~t~~l~~~~~~~~~~~~~-~~~~~~~~ig~~v 153 (211)
|+++|++||++|+.+++.++++......+ +.|..+..++++.|+++||+|+++++.+.++++. .....|+.||+.+
T Consensus 135 YiiAQ~lGA~~GA~lv~~~~~~~~~~~lg~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Ila~~d~~~~~~~~~~pl~IGl~v 214 (340)
T 3iyz_A 135 YITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSV 214 (340)
T ss_pred HHHHHHHHHHHHHHHHHHhcchhhcCceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCccCCcccchhhHHHHHH
Confidence 99999999999999999988754322111 2344578899999999999999999998554443 2457899999999
Q ss_pred HHHHHHhcCCcccccchHhhHHHHHhhccCCceeeeeechhHHHHHHHHHHHhhhcC
Q 040981 154 MLNVFVAGPISGASMNPARSIGPAIVKHKFRGIWLYIIGPVIGTVTGGFAYNLIKIH 210 (211)
Q Consensus 154 ~~~~~~~~~~tG~~~NPA~~~g~~i~~~~~~~~~vy~v~p~~Ga~la~~~~~~~~~~ 210 (211)
.+++...+++||+++||||+|||+++.++|.++|+||++|++|+++|+++|++++.+
T Consensus 215 ~i~~~~g~~~TG~amNPARdlGPal~~~~w~~~WVywvgPiiGailaallY~~l~~p 271 (340)
T 3iyz_A 215 AIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFCP 271 (340)
T ss_pred HHHHHhccCCccccccHHHHHHHHHHccCCCcEeehhHHHHHHHHHHHHHHHHHhCC
Confidence 888888889999999999999999999999999999999999999999999998754
No 5
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=3.4e-51 Score=342.69 Aligned_cols=209 Identities=29% Similarity=0.504 Sum_probs=181.1
Q ss_pred ChhHHHHHHHHHHHHhhhhhhcccc---CCccchhHHHHHHHHHHHHHHHhCCcCcccccHHHHHHHHHhcCccccchhH
Q 040981 1 MIAELIGTYFIIFAGCGAVAVDKIY---GKVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPGVTIALAIFRQFKWRQVPL 77 (211)
Q Consensus 1 ~~aEf~GT~~lv~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~~~~~~~~~~~ 77 (211)
+++||+||++|+++++++.+..... ...+++.++++||+++++.+++++++||||+|||||+++++.|+++|++.+.
T Consensus 16 ~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~ 95 (301)
T 2zz9_A 16 VTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVF 95 (301)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHTSSSCTTTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHhcCCCHHHHHH
Confidence 4799999999999999887543221 2456778899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCccccc-ccc--ccCCchhHHHHHHHHHHHHHHHHhhheecCCc-CCCchhHHHHHHH
Q 040981 78 YIVAQVVGSLLASGTLSLMLDVTPQAYF-GTV--PVGSNAQSFVAEIIISFLLMFVISGAVTDDRA-IGQFGGVAVGMTI 153 (211)
Q Consensus 78 yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~-~~~--p~~s~~~~~~~E~~~t~~l~~~~~~~~~~~~~-~~~~~~~~ig~~v 153 (211)
|+++|++||++|+.+++.++++...... .+. +..+..++++.|+++||+|+++++.+.++++. .....|+.+|+.+
T Consensus 96 YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~~d~~~~~~~~~~pl~IGl~v 175 (301)
T 2zz9_A 96 YITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSV 175 (301)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCSCGGGTSSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHSCSSSSCCSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccccccCceeeecCCcccchHHHHHHHHHHHHHHHHHHHHhcCCCCCCccchHhHHHHHHH
Confidence 9999999999999999999875432211 122 34478899999999999999999997544443 2457899999999
Q ss_pred HHHHHHhcCCcccccchHhhHHHHHhhccCCceeeeeechhHHHHHHHHHHHhhhc
Q 040981 154 MLNVFVAGPISGASMNPARSIGPAIVKHKFRGIWLYIIGPVIGTVTGGFAYNLIKI 209 (211)
Q Consensus 154 ~~~~~~~~~~tG~~~NPA~~~g~~i~~~~~~~~~vy~v~p~~Ga~la~~~~~~~~~ 209 (211)
.+++...+++||+++||||+|||+++.++|.++|+||++|++|+++|+++|++++.
T Consensus 176 ~i~~~~g~~~TG~a~NPAR~~GPal~~~~w~~~WVy~vgPiiGailaa~ly~~l~~ 231 (301)
T 2zz9_A 176 AIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGALYEYVFC 231 (301)
T ss_dssp HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCTTTTHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHhcCCcccccCcHHHHHHHHHhCCCcceeeeeeHHHHHHHHHHHHHHHHhC
Confidence 88888888999999999999999999999999999999999999999999999874
No 6
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=3.4e-51 Score=339.73 Aligned_cols=210 Identities=29% Similarity=0.516 Sum_probs=181.3
Q ss_pred ChhHHHHHHHHHHHHhhhhhhcc----cc---C-CccchhHHHHHHHHHHHHHHHhCCcCcccccHHHHHHHHHhcCccc
Q 040981 1 MIAELIGTYFIIFAGCGAVAVDK----IY---G-KVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPGVTIALAIFRQFKW 72 (211)
Q Consensus 1 ~~aEf~GT~~lv~~~~~~~~~~~----~~---~-~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~~~~~~ 72 (211)
+++||+||++|+|++|++..... .+ + ..+++.++++||+++.+.+++++++||||+|||||+++++.|+++|
T Consensus 14 ~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~ 93 (271)
T 1j4n_A 14 VVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISV 93 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHHHHHHcCCCCH
Confidence 47999999999999998875322 11 1 2357789999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHhccCccccc---cccccCCchhHHHHHHHHHHHHHHHHhhheecCCc-CCCchhHH
Q 040981 73 RQVPLYIVAQVVGSLLASGTLSLMLDVTPQAYF---GTVPVGSNAQSFVAEIIISFLLMFVISGAVTDDRA-IGQFGGVA 148 (211)
Q Consensus 73 ~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~---~~~p~~s~~~~~~~E~~~t~~l~~~~~~~~~~~~~-~~~~~~~~ 148 (211)
++.+.|+++|++||++|+.+++.++++.+.... .+.|..+..++++.|+++|++|+++++...++++. .+...|+.
T Consensus 94 ~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~~~d~~~~~~~~~~pl~ 173 (271)
T 1j4n_A 94 LRAIMYIIAQCVGAIVATAILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSGPLA 173 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTCTTCCTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHHTCSSCCCCCSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhccccCCCccccHHHH
Confidence 999999999999999999999999865433222 23456678899999999999999999987444332 35688999
Q ss_pred HHHHHHHHHHHhcCCcccccchHhhHHHHHhhccCCceeeeeechhHHHHHHHHHHHhhhcC
Q 040981 149 VGMTIMLNVFVAGPISGASMNPARSIGPAIVKHKFRGIWLYIIGPVIGTVTGGFAYNLIKIH 210 (211)
Q Consensus 149 ig~~v~~~~~~~~~~tG~~~NPA~~~g~~i~~~~~~~~~vy~v~p~~Ga~la~~~~~~~~~~ 210 (211)
+|+.+.+.+...+++||+++||||||||+++.++|+++|+||++|++|+++|+++|++++.+
T Consensus 174 IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~~~~~~wv~~vgP~~Ga~la~~~y~~~~~~ 235 (271)
T 1j4n_A 174 IGFSVALGHLLAIDYTGCGINPARSFGSSVITHNFQDHWIFWVGPFIGAALAVLIYDFILAP 235 (271)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTTCCTTTTHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHhccCCCccccChHHHHHHHHHhCCCcceeHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999988888788999999999999999999999999999999999999999999998754
No 7
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=5e-51 Score=339.38 Aligned_cols=208 Identities=23% Similarity=0.398 Sum_probs=180.9
Q ss_pred ChhHHHHHHHHHHHHhhhhhh-ccc-------cCCccchhHHHHHHHHHHHHHHHhCCcCcccccHHHHHHHHHhcCccc
Q 040981 1 MIAELIGTYFIIFAGCGAVAV-DKI-------YGKVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPGVTIALAIFRQFKW 72 (211)
Q Consensus 1 ~~aEf~GT~~lv~~~~~~~~~-~~~-------~~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~~~~~~ 72 (211)
+++||+||++|+++++++... +.. ....+++.++++||+++++.+++++++||||+|||||+++++.|+++|
T Consensus 48 ~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~ 127 (279)
T 2w2e_A 48 MSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVLARAIPP 127 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHHHcCCCCH
Confidence 379999999999999886422 211 112456778999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHhccCccccccccc--cCCchhHHHHHHHHHHHHHHHHhhheecCCcCCCchhHHHH
Q 040981 73 RQVPLYIVAQVVGSLLASGTLSLMLDVTPQAYFGTVP--VGSNAQSFVAEIIISFLLMFVISGAVTDDRAIGQFGGVAVG 150 (211)
Q Consensus 73 ~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~p--~~s~~~~~~~E~~~t~~l~~~~~~~~~~~~~~~~~~~~~ig 150 (211)
++.+.|+++|++||++|+.+++.++++.. ...+.| ..+..++++.|+++|++|+++++.+.+++++.+.+.|+.+|
T Consensus 128 ~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~--~~~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~~~~~~pl~IG 205 (279)
T 2w2e_A 128 FRGILMAFTQIVAGMAAAGAASAMTPGEI--AFANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKHRATWFAPFVIG 205 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCSSC--CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCSTTGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccccc--eeeccCCccccHHHHHHHHHHHHHHHHHHHHHHccCCCCCcCcHHHHHH
Confidence 99999999999999999999999987543 233444 34788999999999999999999886666555668999999
Q ss_pred HHHHHHHHHhcCCcccccchHhhHHHHHhhccC-CceeeeeechhHHHHHHHHHHHhhhcC
Q 040981 151 MTIMLNVFVAGPISGASMNPARSIGPAIVKHKF-RGIWLYIIGPVIGTVTGGFAYNLIKIH 210 (211)
Q Consensus 151 ~~v~~~~~~~~~~tG~~~NPA~~~g~~i~~~~~-~~~~vy~v~p~~Ga~la~~~~~~~~~~ 210 (211)
+.+.++.+..+++||+++||||||||+++...| +++|+||++|++|+++|+++|+++...
T Consensus 206 l~v~~~~l~~g~~TG~s~NPAR~~GPal~~~~~~~~~WVy~vgPiiGa~la~~ly~~l~~~ 266 (279)
T 2w2e_A 206 IALLIAHLICIYYTGAGLNPARSFGPAVAARSFPNYHWIYWLGPILGAFLAYSIWQMWKWL 266 (279)
T ss_dssp HHHHHHHHHHHHHHCCCCSHHHHHHHHHHHTCCCTTTTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcccccccccChHHHHHHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHHHcc
Confidence 999999999999999999999999999999765 589999999999999999999998753
No 8
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=2e-50 Score=333.71 Aligned_cols=209 Identities=30% Similarity=0.486 Sum_probs=182.9
Q ss_pred ChhHHHHHHHHHHHHhhhhhhccccCCccchhHHHHHHHHHHHHHHHhCCcCcccccHHHHHHHHHhcCccccchhHHHH
Q 040981 1 MIAELIGTYFIIFAGCGAVAVDKIYGKVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPGVTIALAIFRQFKWRQVPLYIV 80 (211)
Q Consensus 1 ~~aEf~GT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~~~~~~~~~~~yi~ 80 (211)
+++||+||++|+++++++.... ..+..+++.+++++|+++.+.+++++++||+|+|||||++.++.|++++++.+.|++
T Consensus 13 ~laEfiGT~~Lv~~g~g~~~~~-~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g~~~~~~~~~Yi~ 91 (263)
T 2b6o_A 13 IFAEFFATLFYVFFGLGASLRW-APGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVV 91 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCC-CSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-CCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhcCCCHHHHHHHHH
Confidence 4789999999999999887532 222345677899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCccccc---cccccCCchhHHHHHHHHHHHHHHHHhhheecCC-cCCCchhHHHHHHHHHH
Q 040981 81 AQVVGSLLASGTLSLMLDVTPQAYF---GTVPVGSNAQSFVAEIIISFLLMFVISGAVTDDR-AIGQFGGVAVGMTIMLN 156 (211)
Q Consensus 81 aQ~~Ga~~g~~~~~~~~~~~~~~~~---~~~p~~s~~~~~~~E~~~t~~l~~~~~~~~~~~~-~~~~~~~~~ig~~v~~~ 156 (211)
+|++|+++|+.+++.+++++..... .+.|+.+..++++.|+++|++|+++++.+.++++ ......|+.+|+.+.++
T Consensus 92 AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~~~~~~pl~IGl~v~~~ 171 (263)
T 2b6o_A 92 AQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLG 171 (263)
T ss_dssp HHHHHHHHHHHHHHHHSCTTTCSSCSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTSCSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccccccccccccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcccHHHHHHHHHHHH
Confidence 9999999999999999875432222 2335567899999999999999999999844333 23567899999999999
Q ss_pred HHHhcCCcccccchHhhHHHHHhhccCCceeeeeechhHHHHHHHHHHHhhhcC
Q 040981 157 VFVAGPISGASMNPARSIGPAIVKHKFRGIWLYIIGPVIGTVTGGFAYNLIKIH 210 (211)
Q Consensus 157 ~~~~~~~tG~~~NPA~~~g~~i~~~~~~~~~vy~v~p~~Ga~la~~~~~~~~~~ 210 (211)
++..+++||+++||||||||+++.++|+++|+||++|++|+++|+++|++++.+
T Consensus 172 ~~~~g~~TG~a~NPAR~~GPal~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~ 225 (263)
T 2b6o_A 172 HLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPVIGAGLGSLLYDFLLFP 225 (263)
T ss_dssp HHHHTTTSTTCCCHHHHHHHHHHHTCCTTCTHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred HHhccCCCcccccHHHHHHHHHHcCCccceeHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999999999999999999999998754
No 9
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.9e-51 Score=337.56 Aligned_cols=209 Identities=27% Similarity=0.495 Sum_probs=181.6
Q ss_pred ChhHHHHHHHHHHHHhhhhhhccccCCccchhHHHHHHHHHHHHHHHhCCcCcccccHHHHHHHHHhcCccccchhHHHH
Q 040981 1 MIAELIGTYFIIFAGCGAVAVDKIYGKVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPGVTIALAIFRQFKWRQVPLYIV 80 (211)
Q Consensus 1 ~~aEf~GT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~~~~~~~~~~~yi~ 80 (211)
+++||+||++|+|+++++..... ....+++.++++||+++.+.+++++++||||+|||||+++++.|+++|++.+.|++
T Consensus 15 ~laEfiGT~~lv~~g~g~~~~~~-~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Yi~ 93 (266)
T 3d9s_A 15 VFAEFLATLIFVFFGLGSALKWP-SALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVA 93 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCCS-SSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTSSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCC-CCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHhcCCCHHHHHHHHH
Confidence 47899999999999999875322 22356778999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCcccccc-cc--ccCCchhHHHHHHHHHHHHHHHHhhheecCCc-CCCchhHHHHHHHHHH
Q 040981 81 AQVVGSLLASGTLSLMLDVTPQAYFG-TV--PVGSNAQSFVAEIIISFLLMFVISGAVTDDRA-IGQFGGVAVGMTIMLN 156 (211)
Q Consensus 81 aQ~~Ga~~g~~~~~~~~~~~~~~~~~-~~--p~~s~~~~~~~E~~~t~~l~~~~~~~~~~~~~-~~~~~~~~ig~~v~~~ 156 (211)
+|++||++|+.+++.+++++.....+ +. ++.+..++++.|+++|++|+++++.+.++++. .+...|+.+|+.+.+.
T Consensus 94 AQ~lGA~~ga~l~~~~~~~~~~~~~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~~~~~~pl~IGl~v~~~ 173 (266)
T 3d9s_A 94 AQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLG 173 (266)
T ss_dssp HHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCTTCCSCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccccccCceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCccchHHHHHHHHHHHH
Confidence 99999999999999998653221122 22 34478899999999999999999998543332 3467899999999999
Q ss_pred HHHhcCCcccccchHhhHHHHHhhccCCc-eeeeeechhHHHHHHHHHHHhhhcC
Q 040981 157 VFVAGPISGASMNPARSIGPAIVKHKFRG-IWLYIIGPVIGTVTGGFAYNLIKIH 210 (211)
Q Consensus 157 ~~~~~~~tG~~~NPA~~~g~~i~~~~~~~-~~vy~v~p~~Ga~la~~~~~~~~~~ 210 (211)
+...+++||+++||||||||+++.++|++ +|+||++|++|+++|+++|++++.+
T Consensus 174 ~~~~g~~TG~a~NPAR~~GPal~~~~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~ 228 (266)
T 3d9s_A 174 HLVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFP 228 (266)
T ss_dssp HHHHHHHHSCCSCHHHHHHHHHHHTCCCTTHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHhhccccccccHHHHHHHHHHcCCcccCEeeeehHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999 9999999999999999999998754
No 10
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=3e-51 Score=343.71 Aligned_cols=210 Identities=25% Similarity=0.485 Sum_probs=180.9
Q ss_pred ChhHHHHHHHHHHHHhhhhhhccc----cCCccchhHHHHHHHHHHHHHHHhCCcCcccccHHHHHHHHHhcCccccchh
Q 040981 1 MIAELIGTYFIIFAGCGAVAVDKI----YGKVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPGVTIALAIFRQFKWRQVP 76 (211)
Q Consensus 1 ~~aEf~GT~~lv~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~~~~~~~~~~ 76 (211)
+++||+||++|+|+++++...... ....+++.++++||+++++.+++++++||||+|||||+++++.|+++|++.+
T Consensus 64 ~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l~g~~~~~~~~ 143 (304)
T 3cn5_A 64 AIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVELLRAL 143 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSCHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHHhCCCCHHHHH
Confidence 479999999999999988754321 2245678899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCccccc----cccccCCchhHHHHHHHHHHHHHHHHhhheecCCcC-CC----chhH
Q 040981 77 LYIVAQVVGSLLASGTLSLMLDVTPQAYF----GTVPVGSNAQSFVAEIIISFLLMFVISGAVTDDRAI-GQ----FGGV 147 (211)
Q Consensus 77 ~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~----~~~p~~s~~~~~~~E~~~t~~l~~~~~~~~~~~~~~-~~----~~~~ 147 (211)
.|+++|++||++|+.+++.++++..+... ...+..+..++++.|+++|++|+++++...+++|.. +. +.|+
T Consensus 144 ~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~TfiLv~~Il~~~d~~~~~~~~~~~~lapl 223 (304)
T 3cn5_A 144 VYMIAQCLGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPILAPL 223 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCHHHHHHTTTTCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTEEEEEESTTSCCEEECHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhccCcccccCCCccHHHHHHHHHHHHHHHHHHHhheecCccCCCCcccccchHH
Confidence 99999999999999999999865322111 112345788999999999999999999765434322 22 7899
Q ss_pred HHHHHHHHHHHHhcCCcccccchHhhHHHHHh---hccCCceeeeeechhHHHHHHHHHHHhhhcC
Q 040981 148 AVGMTIMLNVFVAGPISGASMNPARSIGPAIV---KHKFRGIWLYIIGPVIGTVTGGFAYNLIKIH 210 (211)
Q Consensus 148 ~ig~~v~~~~~~~~~~tG~~~NPA~~~g~~i~---~~~~~~~~vy~v~p~~Ga~la~~~~~~~~~~ 210 (211)
.+|+.+.+..+..+++||+++||||||||+++ .++|+++|+||++|++|+++|+++|++++.+
T Consensus 224 ~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~w~~~WvywvgPiiGa~laa~~y~~l~~~ 289 (304)
T 3cn5_A 224 PIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVLRA 289 (304)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHHHHHTTHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCCcCceEEEeehHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999 6689999999999999999999999998764
No 11
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=1.4e-50 Score=332.24 Aligned_cols=210 Identities=34% Similarity=0.577 Sum_probs=180.4
Q ss_pred ChhHHHHHHHHHHHHhhhhhhcc--cc----------------CCccchhHHHHHHHHHHHHHHHhCCcCcccccHHHHH
Q 040981 1 MIAELIGTYFIIFAGCGAVAVDK--IY----------------GKVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPGVTI 62 (211)
Q Consensus 1 ~~aEf~GT~~lv~~~~~~~~~~~--~~----------------~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTl 62 (211)
+++||+||++|+|+++++..... ++ +..+++.++++||+++.+.+++++++||||+|||||+
T Consensus 8 ~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~NPAVTl 87 (246)
T 2f2b_A 8 CIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHINPAVTI 87 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeCHHHHH
Confidence 47899999999999998765432 10 1122345899999999999999999999999999999
Q ss_pred HHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHhccCc---cccccccc--cCCchhHHHHHHHHHHHHHHHHhhheec
Q 040981 63 ALAIFRQFKWRQVPLYIVAQVVGSLLASGTLSLMLDVTP---QAYFGTVP--VGSNAQSFVAEIIISFLLMFVISGAVTD 137 (211)
Q Consensus 63 a~~l~~~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~---~~~~~~~p--~~s~~~~~~~E~~~t~~l~~~~~~~~~~ 137 (211)
++++.||++|++.+.|+++|++|+++|+.+++.+++++. .....+.| ..+..++++.|+++|++|+++++...+|
T Consensus 88 a~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~ 167 (246)
T 2f2b_A 88 GLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVD 167 (246)
T ss_dssp HHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHCTHHHHTTGGGCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhcceeeeccCccccchHHHHHHHHHHHHHHHheeeEEecC
Confidence 999999999999999999999999999999999997632 23444666 4478899999999999999999987666
Q ss_pred CCcCCCchhHHHHHHHHHHHHHhcCCcccccchHhhHHHHHh--h----ccCCceeeeeechhHHHHHHHHHHHhhhcC
Q 040981 138 DRAIGQFGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIV--K----HKFRGIWLYIIGPVIGTVTGGFAYNLIKIH 210 (211)
Q Consensus 138 ~~~~~~~~~~~ig~~v~~~~~~~~~~tG~~~NPA~~~g~~i~--~----~~~~~~~vy~v~p~~Ga~la~~~~~~~~~~ 210 (211)
+|.++...|+.+|+.+...++..+++||+++||||||||+++ . ++|++.|+||++|++|+++|+++||++..|
T Consensus 168 ~~~~~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy~vap~~Ga~laa~~y~~l~~~ 246 (246)
T 2f2b_A 168 ERAPKGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYLTSE 246 (246)
T ss_dssp TTSCTTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred CCCCCceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEeeeHHHHHHHHHHHHHHHHcCC
Confidence 665567899999999999999999999999999999999993 2 367888899999999999999999998764
No 12
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=100.00 E-value=3e-50 Score=335.97 Aligned_cols=210 Identities=34% Similarity=0.530 Sum_probs=177.8
Q ss_pred ChhHHHHHHHHHHHHhhhhhhcccc-CCccchhHHHHHHHHHHHHHHHhCCcCcccccHHHHHHHHHhcCccccchhHHH
Q 040981 1 MIAELIGTYFIIFAGCGAVAVDKIY-GKVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPGVTIALAIFRQFKWRQVPLYI 79 (211)
Q Consensus 1 ~~aEf~GT~~lv~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~~~~~~~~~~~yi 79 (211)
+++||+||++|+++++++....... +..+...++++||+++.+.+++++++||||+|||||+++++.|+++|++.+.|+
T Consensus 11 ~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Yi 90 (281)
T 1ldf_A 11 CIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFI 90 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCCTTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCCCHHHHHHHH
Confidence 4789999999999999876533222 233445689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCcc-------------------cccccccc--CCchhHHHHHHHHHHHHHHHHhhheecC
Q 040981 80 VAQVVGSLLASGTLSLMLDVTPQ-------------------AYFGTVPV--GSNAQSFVAEIIISFLLMFVISGAVTDD 138 (211)
Q Consensus 80 ~aQ~~Ga~~g~~~~~~~~~~~~~-------------------~~~~~~p~--~s~~~~~~~E~~~t~~l~~~~~~~~~~~ 138 (211)
++|++||++|+.+++.++++..+ ..+++.|. .+..++++.|+++|++|+++++.+.+++
T Consensus 91 ~AQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~ 170 (281)
T 1ldf_A 91 VSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDG 170 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 99999999999999998864211 12345554 4788999999999999999999985444
Q ss_pred CcC--CCchhHHHHHHHHHHHHHhcCCcccccchHhhHHHHHhhc-------cC------CceeeeeechhHHHHHHHHH
Q 040981 139 RAI--GQFGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH-------KF------RGIWLYIIGPVIGTVTGGFA 203 (211)
Q Consensus 139 ~~~--~~~~~~~ig~~v~~~~~~~~~~tG~~~NPA~~~g~~i~~~-------~~------~~~~vy~v~p~~Ga~la~~~ 203 (211)
+.. +...|+.+|+.+....+..+++||+++|||||||||++.. .| .++|+||++|++|+++|+++
T Consensus 171 ~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~g~g~~~~~~~~~~~~~WVy~vgPi~Ga~la~~~ 250 (281)
T 1ldf_A 171 NGVPRGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFA 250 (281)
T ss_dssp SSSCCGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCTTHHHHHHHHHHHHHHHHH
T ss_pred CCCcccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHhcccccccccccCCCceeeHHhHHHHHHHHHHHHH
Confidence 332 4588999999999999999999999999999999999861 22 27999999999999999999
Q ss_pred HHhhhcC
Q 040981 204 YNLIKIH 210 (211)
Q Consensus 204 ~~~~~~~ 210 (211)
|++++.+
T Consensus 251 y~~l~~~ 257 (281)
T 1ldf_A 251 YRKLIGR 257 (281)
T ss_dssp HHHHTGG
T ss_pred HHHHhCc
Confidence 9998753
No 13
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=100.00 E-value=4.6e-50 Score=331.11 Aligned_cols=209 Identities=26% Similarity=0.456 Sum_probs=175.0
Q ss_pred ChhHHHHHHHHHHHHhhhhhhcccc-CCccchhHHHHHHHHHHHHHHHhCCcCcccccHHHHHHHHHhcCccccchhHHH
Q 040981 1 MIAELIGTYFIIFAGCGAVAVDKIY-GKVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPGVTIALAIFRQFKWRQVPLYI 79 (211)
Q Consensus 1 ~~aEf~GT~~lv~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l~~~~~~~~~~~yi 79 (211)
+++||+||++|+|++|++....... ...+++.++++||+++.+.+++++++||||+|||||+++++.||+++++.+.|+
T Consensus 13 ~~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~Yi 92 (258)
T 3c02_A 13 FIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFDLKKIPVYF 92 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGGGHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCCcHHHHHHHH
Confidence 4789999999999999876533222 245677899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCccccc--------cccccCCchhHHHHHHHHHHHHHHHHhhheecCC--cCCCch-hHH
Q 040981 80 VAQVVGSLLASGTLSLMLDVTPQAYF--------GTVPVGSNAQSFVAEIIISFLLMFVISGAVTDDR--AIGQFG-GVA 148 (211)
Q Consensus 80 ~aQ~~Ga~~g~~~~~~~~~~~~~~~~--------~~~p~~s~~~~~~~E~~~t~~l~~~~~~~~~~~~--~~~~~~-~~~ 148 (211)
++|++|+++|+.+++.+++++.+... +.....+..++++.|+++|++|+++++.+.++++ ..+... |+.
T Consensus 93 ~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~E~i~Tf~Lv~~i~~~~d~~~~~~~~~~~~pl~ 172 (258)
T 3c02_A 93 FAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWETSRNPSISLTGAFFNELILTGILLLVILVVVDENICGKFHILKLSSV 172 (258)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHTTCSCTTCSSCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcchhhhhccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHHHhCcccCCcccccHHHHH
Confidence 99999999999999999864321110 1111123456999999999999999999754333 234567 999
Q ss_pred HHHHHHHHHHHhcCCcccccchHhhHHHHHhhc------cC----CceeeeeechhHHHHHHHHHHHhhhc
Q 040981 149 VGMTIMLNVFVAGPISGASMNPARSIGPAIVKH------KF----RGIWLYIIGPVIGTVTGGFAYNLIKI 209 (211)
Q Consensus 149 ig~~v~~~~~~~~~~tG~~~NPA~~~g~~i~~~------~~----~~~~vy~v~p~~Ga~la~~~~~~~~~ 209 (211)
+|+.+....+..+++||+++|||||||||++.. +| +++|+||++|++|+++|+++|++++.
T Consensus 173 IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga~la~~~y~~~~~ 243 (258)
T 3c02_A 173 VGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYDKVIC 243 (258)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999872 34 66999999999999999999999875
No 14
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.61 E-value=5.1e-16 Score=127.96 Aligned_cols=99 Identities=21% Similarity=0.256 Sum_probs=85.6
Q ss_pred CchhHHHHHHHHHHHHHHHHhhheecCCc-CCC--chhHHHHHHHHHHHHHhcCCcccccchHhhHHHHHhhc-cCCcee
Q 040981 112 SNAQSFVAEIIISFLLMFVISGAVTDDRA-IGQ--FGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH-KFRGIW 187 (211)
Q Consensus 112 s~~~~~~~E~~~t~~l~~~~~~~~~~~~~-~~~--~~~~~ig~~v~~~~~~~~~~tG~~~NPA~~~g~~i~~~-~~~~~~ 187 (211)
+..|.++.|+++|++|+++.+....+.+. ... ..++.+|+++.+.++..+++||+|+|||++++.++.++ +|++.|
T Consensus 8 ~~~~~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g~~~~~~~~ 87 (263)
T 2b6o_A 8 SFWRAIFAEFFATLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAI 87 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCCSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTTCSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhcCCCHHHHH
Confidence 46789999999999999999887543221 112 25688999999999999999999999999999999987 899999
Q ss_pred eeeechhHHHHHHHHHHHhhhcC
Q 040981 188 LYIIGPVIGTVTGGFAYNLIKIH 210 (211)
Q Consensus 188 vy~v~p~~Ga~la~~~~~~~~~~ 210 (211)
.||++|++|+++|+.+.+.++++
T Consensus 88 ~Yi~AQ~lGa~~ga~l~~~~~~~ 110 (263)
T 2b6o_A 88 CYVVAQLLGAVAGAAVLYSVTPP 110 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHHHHHHHHHHccc
Confidence 99999999999999999998865
No 15
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.53 E-value=1.3e-14 Score=121.37 Aligned_cols=99 Identities=18% Similarity=0.285 Sum_probs=84.9
Q ss_pred CchhHHHHHHHHHHHHHHHHhhheecCCc-----CCC--chhHHHHHHHHHHHHHhcCCcccccchHhhHHHHHhhc-cC
Q 040981 112 SNAQSFVAEIIISFLLMFVISGAVTDDRA-----IGQ--FGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH-KF 183 (211)
Q Consensus 112 s~~~~~~~E~~~t~~l~~~~~~~~~~~~~-----~~~--~~~~~ig~~v~~~~~~~~~~tG~~~NPA~~~g~~i~~~-~~ 183 (211)
+.+|.++.|+++|++|+++.++....... ... ...+.+|+++.+.+++.+++||+|+|||++++.++.++ +|
T Consensus 11 ~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~ 90 (301)
T 2zz9_A 11 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI 90 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHTSSSCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHhcCCCH
Confidence 57899999999999999998876432111 111 24688999999999999999999999999999999987 89
Q ss_pred CceeeeeechhHHHHHHHHHHHhhhcC
Q 040981 184 RGIWLYIIGPVIGTVTGGFAYNLIKIH 210 (211)
Q Consensus 184 ~~~~vy~v~p~~Ga~la~~~~~~~~~~ 210 (211)
.+...|+++|++|+++|+.+.+.++++
T Consensus 91 ~~~~~YiiAQ~lGAi~Ga~lv~~~~~~ 117 (301)
T 2zz9_A 91 AKSVFYITAQCLGAIIGAGILYLVTPP 117 (301)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999988765
No 16
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.53 E-value=5.4e-15 Score=121.05 Aligned_cols=99 Identities=24% Similarity=0.336 Sum_probs=82.6
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhhee-cCCcC---CC--chhHHHHHHHHHHHHHhcCCcccccchHhhHHHHHhhc-cC
Q 040981 111 GSNAQSFVAEIIISFLLMFVISGAVT-DDRAI---GQ--FGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH-KF 183 (211)
Q Consensus 111 ~s~~~~~~~E~~~t~~l~~~~~~~~~-~~~~~---~~--~~~~~ig~~v~~~~~~~~~~tG~~~NPA~~~g~~i~~~-~~ 183 (211)
.+..|.+++|+++|++|++..++... .++.+ .. ...+.+|++|.+.+++.+++||+++|||++++.++.++ +|
T Consensus 27 ~~l~r~~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~ 106 (256)
T 3llq_A 27 YVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGRFPA 106 (256)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcCCCH
Confidence 36789999999999999998887642 11111 11 24578999999999999999999999999999999987 89
Q ss_pred CceeeeeechhHHHHHHHHHHHhhhc
Q 040981 184 RGIWLYIIGPVIGTVTGGFAYNLIKI 209 (211)
Q Consensus 184 ~~~~vy~v~p~~Ga~la~~~~~~~~~ 209 (211)
++.+.|+++|++|+++|+.+.+.+++
T Consensus 107 ~~~~~YiiAQ~lGA~~ga~lv~~~~~ 132 (256)
T 3llq_A 107 SSLVPYVIAQVAGAIVAAAALYVIAT 132 (256)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999888764
No 17
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.52 E-value=5.9e-15 Score=121.69 Aligned_cols=99 Identities=17% Similarity=0.302 Sum_probs=84.7
Q ss_pred CchhHHHHHHHHHHHHHHHHhhheecCCc-CCC--chhHHHHHHHHHHHHHhcCCcccccchHhhHHHHHhhc-cCCcee
Q 040981 112 SNAQSFVAEIIISFLLMFVISGAVTDDRA-IGQ--FGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH-KFRGIW 187 (211)
Q Consensus 112 s~~~~~~~E~~~t~~l~~~~~~~~~~~~~-~~~--~~~~~ig~~v~~~~~~~~~~tG~~~NPA~~~g~~i~~~-~~~~~~ 187 (211)
+..|.++.|+++|++|++..++...+... ... ...+.+|+++.+.+++.+++||+|+|||++++.++.++ +|++.+
T Consensus 10 ~~~r~~laEfiGT~~lv~~g~g~~~~~~~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~ 89 (266)
T 3d9s_A 10 AFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAF 89 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTSSSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHhcCCCHHHHH
Confidence 46789999999999999998887543221 112 24688999999999999999999999999999999987 899999
Q ss_pred eeeechhHHHHHHHHHHHhhhcC
Q 040981 188 LYIIGPVIGTVTGGFAYNLIKIH 210 (211)
Q Consensus 188 vy~v~p~~Ga~la~~~~~~~~~~ 210 (211)
.|+++|++|+++|+.+.+.++++
T Consensus 90 ~Yi~AQ~lGA~~ga~l~~~~~~~ 112 (266)
T 3d9s_A 90 FYVAAQLVGAIAGAGILYGVAPL 112 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHccc
Confidence 99999999999999999988753
No 18
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.51 E-value=4.7e-14 Score=115.28 Aligned_cols=94 Identities=26% Similarity=0.436 Sum_probs=76.5
Q ss_pred ChhHHHHHHHHHHHHhhhhhhccccCCccchhHHHHHHHHHHHHHHHhCCcCcccccHHHHHHHHH-----hcCccccch
Q 040981 1 MIAELIGTYFIIFAGCGAVAVDKIYGKVTFPGVCVTWGLIVMVMIYSLAHISGAHFNPGVTIALAI-----FRQFKWRQV 75 (211)
Q Consensus 1 ~~aEf~GT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~iSGah~NPavTla~~l-----~~~~~~~~~ 75 (211)
++.|+++|++|++..++....++.. . ...++.+|+.+....+..+++||+|+|||+|++..+ .++..|.+.
T Consensus 147 ~~~E~i~Tf~Lv~~i~~~~~~~~~~--~--~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~ 222 (246)
T 2f2b_A 147 MLAEVVGTFLLMITIMGIAVDERAP--K--GFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYY 222 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSTTSC--T--TCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGT
T ss_pred HHHHHHHHHHHHheeeEEecCCCCC--C--ceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceE
Confidence 3689999999999887654322211 1 234788999999999999999999999999999887 346678889
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhc
Q 040981 76 PLYIVAQVVGSLLASGTLSLMLD 98 (211)
Q Consensus 76 ~~yi~aQ~~Ga~~g~~~~~~~~~ 98 (211)
++|+++|++|+++|+.+.+.+.+
T Consensus 223 ~vy~vap~~Ga~laa~~y~~l~~ 245 (246)
T 2f2b_A 223 SIYVIGPIVGAVLAALTYQYLTS 245 (246)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEeeeHHHHHHHHHHHHHHHHcC
Confidence 99999999999999988776653
No 19
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.51 E-value=9.8e-15 Score=118.40 Aligned_cols=98 Identities=27% Similarity=0.290 Sum_probs=82.6
Q ss_pred chhHHHHHHHHHHHHHHHHhhheecCC-cC-C--C--chhHHHHHHHHHHHHHhcCCcccccchHhhHHHHHhhc-cCCc
Q 040981 113 NAQSFVAEIIISFLLMFVISGAVTDDR-AI-G--Q--FGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH-KFRG 185 (211)
Q Consensus 113 ~~~~~~~E~~~t~~l~~~~~~~~~~~~-~~-~--~--~~~~~ig~~v~~~~~~~~~~tG~~~NPA~~~g~~i~~~-~~~~ 185 (211)
..|.++.|+++|++|++..++...-++ .+ . . ...+.+|+.+.+.+++.+++||+|+|||++++..+.++ +|++
T Consensus 4 l~r~~~aEf~GT~~lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 83 (234)
T 2o9g_A 4 MFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKE 83 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCCCHHH
Confidence 478999999999999998876532211 11 1 1 24588999999999999999999999999999999987 8999
Q ss_pred eeeeeechhHHHHHHHHHHHhhhcC
Q 040981 186 IWLYIIGPVIGTVTGGFAYNLIKIH 210 (211)
Q Consensus 186 ~~vy~v~p~~Ga~la~~~~~~~~~~ 210 (211)
...|+++|++|+++|+.+.+.++++
T Consensus 84 ~~~Yi~aQ~lGa~~ga~l~~~~~~~ 108 (234)
T 2o9g_A 84 VVGYVIAQVVGGIVAAALLYLIASG 108 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999888763
No 20
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.50 E-value=9.1e-15 Score=117.76 Aligned_cols=98 Identities=18% Similarity=0.301 Sum_probs=82.8
Q ss_pred chhHHHHHHHHHHHHHHHHhhheec--CCcC---CC--chhHHHHHHHHHHHHHhcCCcccccchHhhHHHHHhhc-cCC
Q 040981 113 NAQSFVAEIIISFLLMFVISGAVTD--DRAI---GQ--FGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH-KFR 184 (211)
Q Consensus 113 ~~~~~~~E~~~t~~l~~~~~~~~~~--~~~~---~~--~~~~~ig~~v~~~~~~~~~~tG~~~NPA~~~g~~i~~~-~~~ 184 (211)
.+|.++.|+++|++|++..++...+ ++.+ .. ...+.+|+.+.+.+++.++.||+|+|||++++..+.++ +|+
T Consensus 3 ~~r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~~ 82 (223)
T 3gd8_A 3 FWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIA 82 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCCHH
Confidence 5789999999999999988876432 1111 11 24578999999999999999999999999999999987 899
Q ss_pred ceeeeeechhHHHHHHHHHHHhhhcC
Q 040981 185 GIWLYIIGPVIGTVTGGFAYNLIKIH 210 (211)
Q Consensus 185 ~~~vy~v~p~~Ga~la~~~~~~~~~~ 210 (211)
+...|+++|++|+++++.+.+.++++
T Consensus 83 ~~~~Yi~AQ~lGA~~ga~lv~~~~~~ 108 (223)
T 3gd8_A 83 KSVFYIAAQCLGAIIGAGILYLVTPP 108 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 99999999999999999998887654
No 21
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.48 E-value=1.3e-14 Score=122.43 Aligned_cols=99 Identities=18% Similarity=0.286 Sum_probs=83.2
Q ss_pred CchhHHHHHHHHHHHHHHHHhhheecC--CcC---CC--chhHHHHHHHHHHHHHhcCCcccccchHhhHHHHHhhc-cC
Q 040981 112 SNAQSFVAEIIISFLLMFVISGAVTDD--RAI---GQ--FGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH-KF 183 (211)
Q Consensus 112 s~~~~~~~E~~~t~~l~~~~~~~~~~~--~~~---~~--~~~~~ig~~v~~~~~~~~~~tG~~~NPA~~~g~~i~~~-~~ 183 (211)
+.+|.+++||++|++|+++.++..... +.+ .. ...+.+|++|.+.+++.+++||+|+|||++++.++.++ +|
T Consensus 50 ~l~r~~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G~~~~ 129 (340)
T 3iyz_A 50 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISI 129 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHcCCCCH
Confidence 458899999999999999888764321 111 11 24678999999999999999999999999999999987 89
Q ss_pred CceeeeeechhHHHHHHHHHHHhhhcC
Q 040981 184 RGIWLYIIGPVIGTVTGGFAYNLIKIH 210 (211)
Q Consensus 184 ~~~~vy~v~p~~Ga~la~~~~~~~~~~ 210 (211)
.+...|+++|++|+++|+.+.+.++++
T Consensus 130 ~~~~~YiiAQ~lGA~~GA~lv~~~~~~ 156 (340)
T 3iyz_A 130 AKSVFYITAQCLGAIIGAGILYLVTPP 156 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 999999999999999999998887754
No 22
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.47 E-value=1.8e-14 Score=118.39 Aligned_cols=99 Identities=24% Similarity=0.443 Sum_probs=83.3
Q ss_pred CchhHHHHHHHHHHHHHHHHhhheec---CCcCCCc--hhHHHHHHHHHHHHHhcCCcccccchHhhHHHHHhhc-cCCc
Q 040981 112 SNAQSFVAEIIISFLLMFVISGAVTD---DRAIGQF--GGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH-KFRG 185 (211)
Q Consensus 112 s~~~~~~~E~~~t~~l~~~~~~~~~~---~~~~~~~--~~~~ig~~v~~~~~~~~~~tG~~~NPA~~~g~~i~~~-~~~~ 185 (211)
+..|.++.|+++|++|++..++...+ .+..... ..+.+|+.+.+.+++.+++||+|+|||+|++..+.++ +|++
T Consensus 8 ~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 87 (258)
T 3c02_A 8 SYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFDLKK 87 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCCcHHH
Confidence 56789999999999999987765321 1111222 4578899999999999999999999999999999987 8999
Q ss_pred eeeeeechhHHHHHHHHHHHhhhcC
Q 040981 186 IWLYIIGPVIGTVTGGFAYNLIKIH 210 (211)
Q Consensus 186 ~~vy~v~p~~Ga~la~~~~~~~~~~ 210 (211)
...|+++|++|+++|+.+.+.++++
T Consensus 88 ~~~Yi~AQ~lGa~~ga~l~~~~~~~ 112 (258)
T 3c02_A 88 IPVYFFAQLLGAFVGTSTVYGLYHG 112 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcch
Confidence 9999999999999999998888753
No 23
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.47 E-value=2.2e-14 Score=119.33 Aligned_cols=99 Identities=22% Similarity=0.324 Sum_probs=83.2
Q ss_pred CchhHHHHHHHHHHHHHHHHhhheec----CCcCCC-chhHHHHHHHHHHHHHhcCCcccccchHhhHHHHHhhc-cCCc
Q 040981 112 SNAQSFVAEIIISFLLMFVISGAVTD----DRAIGQ-FGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH-KFRG 185 (211)
Q Consensus 112 s~~~~~~~E~~~t~~l~~~~~~~~~~----~~~~~~-~~~~~ig~~v~~~~~~~~~~tG~~~NPA~~~g~~i~~~-~~~~ 185 (211)
+..|.++.|+++|++|++..++.... +...+. ...+.+|+.+.+.+++.+++||+|+|||++++..+.++ +|++
T Consensus 6 ~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 85 (281)
T 1ldf_A 6 TLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRK 85 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCCCHHH
Confidence 56789999999999999987764321 111111 25688999999999999999999999999999999987 8999
Q ss_pred eeeeeechhHHHHHHHHHHHhhhcC
Q 040981 186 IWLYIIGPVIGTVTGGFAYNLIKIH 210 (211)
Q Consensus 186 ~~vy~v~p~~Ga~la~~~~~~~~~~ 210 (211)
...|+++|++|+++|+.+.+.++++
T Consensus 86 ~~~Yi~AQ~lGA~~ga~l~~~~~~~ 110 (281)
T 1ldf_A 86 VIPFIVSQVAGAFCAAALVYGLYYN 110 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999998887753
No 24
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.47 E-value=2.2e-14 Score=118.61 Aligned_cols=98 Identities=24% Similarity=0.368 Sum_probs=82.4
Q ss_pred CchhHHHHHHHHHHHHHHHHhhheec-------CCcCC---C--chhHHHHHHHHHHHHHhcCCcccccchHhhHHHHHh
Q 040981 112 SNAQSFVAEIIISFLLMFVISGAVTD-------DRAIG---Q--FGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIV 179 (211)
Q Consensus 112 s~~~~~~~E~~~t~~l~~~~~~~~~~-------~~~~~---~--~~~~~ig~~v~~~~~~~~~~tG~~~NPA~~~g~~i~ 179 (211)
+.+|.++.|+++|++|++..++.... ++..+ . ...+.+|+.+.+.+++.+++||+|+|||++++.++.
T Consensus 9 ~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~ 88 (271)
T 1j4n_A 9 LFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLS 88 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHHHHHHc
Confidence 46789999999999999988775321 11111 1 246889999999999999999999999999999999
Q ss_pred hc-cCCceeeeeechhHHHHHHHHHHHhhhc
Q 040981 180 KH-KFRGIWLYIIGPVIGTVTGGFAYNLIKI 209 (211)
Q Consensus 180 ~~-~~~~~~vy~v~p~~Ga~la~~~~~~~~~ 209 (211)
++ +|++...|+++|++|+++|+.+.+.+++
T Consensus 89 g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~ 119 (271)
T 1j4n_A 89 CQISVLRAIMYIIAQCVGAIVATAILSGITS 119 (271)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 87 8999999999999999999999888764
No 25
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.46 E-value=4.1e-14 Score=117.34 Aligned_cols=99 Identities=14% Similarity=0.222 Sum_probs=82.0
Q ss_pred CchhHHHHHHHHHHHHHHHHhhhe--ecC-----CcCCC-----chhHHHHHHHHHHHHHhcCCcccccchHhhHHHHHh
Q 040981 112 SNAQSFVAEIIISFLLMFVISGAV--TDD-----RAIGQ-----FGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIV 179 (211)
Q Consensus 112 s~~~~~~~E~~~t~~l~~~~~~~~--~~~-----~~~~~-----~~~~~ig~~v~~~~~~~~~~tG~~~NPA~~~g~~i~ 179 (211)
+.+|.++.|+++|++|++..++.. ... +..+. ...+.+|+.+.+.+++.+++||+|+|||++++..+.
T Consensus 43 ~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~ 122 (279)
T 2w2e_A 43 NHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVLA 122 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHHHc
Confidence 456789999999999998876642 111 01111 245789999999999999999999999999999999
Q ss_pred hc-cCCceeeeeechhHHHHHHHHHHHhhhcC
Q 040981 180 KH-KFRGIWLYIIGPVIGTVTGGFAYNLIKIH 210 (211)
Q Consensus 180 ~~-~~~~~~vy~v~p~~Ga~la~~~~~~~~~~ 210 (211)
++ +|++...|+++|++|+++|+.+.+.++++
T Consensus 123 g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~ 154 (279)
T 2w2e_A 123 RAIPPFRGILMAFTQIVAGMAAAGAASAMTPG 154 (279)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 87 89999999999999999999999888764
No 26
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.46 E-value=2.2e-14 Score=120.09 Aligned_cols=99 Identities=22% Similarity=0.358 Sum_probs=83.0
Q ss_pred CchhHHHHHHHHHHHHHHHHhhheec---CCcC-C--C--chhHHHHHHHHHHHHHhcCCcccccchHhhHHHHHhhc-c
Q 040981 112 SNAQSFVAEIIISFLLMFVISGAVTD---DRAI-G--Q--FGGVAVGMTIMLNVFVAGPISGASMNPARSIGPAIVKH-K 182 (211)
Q Consensus 112 s~~~~~~~E~~~t~~l~~~~~~~~~~---~~~~-~--~--~~~~~ig~~v~~~~~~~~~~tG~~~NPA~~~g~~i~~~-~ 182 (211)
+.+|.++.|+++|++|+++.++.... .+.+ . . ...+.+|+.+.+.+++.+++||+|+|||+|++..+.++ +
T Consensus 59 ~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l~g~~~ 138 (304)
T 3cn5_A 59 SFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVE 138 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHHhCCCC
Confidence 56789999999999999988765321 1111 1 1 24578899999999999999999999999999999987 8
Q ss_pred CCceeeeeechhHHHHHHHHHHHhhhcC
Q 040981 183 FRGIWLYIIGPVIGTVTGGFAYNLIKIH 210 (211)
Q Consensus 183 ~~~~~vy~v~p~~Ga~la~~~~~~~~~~ 210 (211)
|++...|+++|++|+++|+.+.+.++++
T Consensus 139 ~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~ 166 (304)
T 3cn5_A 139 LLRALVYMIAQCLGAICGVGLVKAFMKG 166 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999888753
No 27
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=58.71 E-value=2.3 Score=35.52 Aligned_cols=20 Identities=20% Similarity=0.245 Sum_probs=17.0
Q ss_pred CcCcccccHHHHHHHHHhcC
Q 040981 50 HISGAHFNPGVTIALAIFRQ 69 (211)
Q Consensus 50 ~iSGah~NPavTla~~l~~~ 69 (211)
.=||||++|+++++..+..+
T Consensus 10 GGTgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 10 GGTGGHVFPALACAREFQAR 29 (365)
T ss_dssp CSSHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHhC
Confidence 34889999999999998764
No 28
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A
Probab=55.51 E-value=44 Score=27.04 Aligned_cols=98 Identities=8% Similarity=0.115 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHHhCCc-CcccccHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHh--cc----Cccccc
Q 040981 33 VCVTWGLIVMVMIYSLAHI-SGAHFNPGVTIALAIFRQFKWRQVPLYIVAQVVGSLLASGTLSLML--DV----TPQAYF 105 (211)
Q Consensus 33 ~~~~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~~~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~--~~----~~~~~~ 105 (211)
-++.+.+++...+..-+.. +| |--.++ ..+.||.++++.+--+.-=.+|=++|+.+.-.+. .. .+....
T Consensus 71 ~g~~F~vGL~lVvl~G~ELFTg---n~l~~~-a~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~~~~ 146 (285)
T 3kcu_A 71 GGICFSLGLILCVVCGADLFTS---TVLIVV-AKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWG 146 (285)
T ss_dssp HHHHHTHHHHHHHHHTCCCTTT---THHHHH-HHTTTCCCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHTGGGTTTTHHH
T ss_pred HHHHHHHHHHHHHHhCcccccc---chHHHH-HHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCchHHH
Confidence 3556666666666665544 55 422333 3568888888776555555555555554433321 10 010011
Q ss_pred c-------ccccCCchhHHHHHHHHHHHHHHHHhhh
Q 040981 106 G-------TVPVGSNAQSFVAEIIISFLLMFVISGA 134 (211)
Q Consensus 106 ~-------~~p~~s~~~~~~~E~~~t~~l~~~~~~~ 134 (211)
. ..-+.+..+.|+-=.++-++.++.+...
T Consensus 147 ~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~ 182 (285)
T 3kcu_A 147 LNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMS 182 (285)
T ss_dssp HHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1112355677777777777777777664
No 29
>3kly_A Putative formate transporter 1; membrane protein, channel, structural genomics, PSI-2, protein structure initiative; HET: BOG; 2.10A {Vibrio cholerae} PDB: 3klz_A*
Probab=30.29 E-value=1.2e+02 Score=24.43 Aligned_cols=98 Identities=9% Similarity=0.099 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHHhCCc-CcccccHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHhc--c----Cccccc
Q 040981 33 VCVTWGLIVMVMIYSLAHI-SGAHFNPGVTIALAIFRQFKWRQVPLYIVAQVVGSLLASGTLSLMLD--V----TPQAYF 105 (211)
Q Consensus 33 ~~~~~g~~~~~~i~~~~~i-SGah~NPavTla~~l~~~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~--~----~~~~~~ 105 (211)
-++.+.+++...+..-+.. +|-.+- ++ ..+.||.++++.+--+.-=.+|=++|+.+.-.+.. . ++....
T Consensus 70 ~g~~F~vGL~lVvl~g~ELFTgn~l~---~~-~~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~~~~ 145 (280)
T 3kly_A 70 GGLAFSLGLILVVITGGELFTSSVLI---LV-AKASGKISWKELVRNWTVVYFGNLCGSIILVFIMLATRQFMEDGGQLG 145 (280)
T ss_dssp HHHHHHHHHHHHHHHTCCCTTTTCCC---CS-SSSSSSCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTTTTHHH
T ss_pred HHHHHHHHHHHHHHccccccccchHH---HH-HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCchHHH
Confidence 3566666666666665544 553332 22 24678899988887666666666666655433321 0 010011
Q ss_pred c-------ccccCCchhHHHHHHHHHHHHHHHHhhh
Q 040981 106 G-------TVPVGSNAQSFVAEIIISFLLMFVISGA 134 (211)
Q Consensus 106 ~-------~~p~~s~~~~~~~E~~~t~~l~~~~~~~ 134 (211)
. ..-+.+..+.|+-=.++-++.++.+...
T Consensus 146 ~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~ 181 (280)
T 3kly_A 146 LNAMAISQHKLHHTFLQAFALGLMCNILVCLAVWMT 181 (280)
T ss_dssp HHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1112355677777777777777777664
Done!