Query 040986
Match_columns 514
No_of_seqs 131 out of 1058
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 03:43:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040986.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040986hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3npe_A 9-CIS-epoxycarotenoid d 100.0 1E-124 3E-129 1016.7 49.0 487 21-512 35-528 (529)
2 2biw_A Apocarotenoid-cleaving 100.0 7E-116 2E-120 942.2 47.6 446 35-505 21-490 (490)
3 3kvc_A Retinoid isomerohydrola 100.0 1E-110 4E-115 910.6 45.1 456 30-505 8-533 (533)
4 1qks_A Cytochrome CD1 nitrite 49.2 2.6E+02 0.0089 29.5 15.0 104 362-491 179-285 (567)
5 3c75_H MADH, methylamine dehyd 34.3 1.9E+02 0.0065 29.5 10.4 79 397-491 85-168 (426)
6 1fwx_A Nitrous oxide reductase 32.3 96 0.0033 33.4 7.9 82 396-492 101-195 (595)
7 3nol_A Glutamine cyclotransfer 31.5 2.3E+02 0.0079 27.0 9.7 96 364-490 69-164 (262)
8 3mbr_X Glutamine cyclotransfer 22.6 1.2E+02 0.004 28.7 5.7 35 162-199 70-105 (243)
9 4guc_A Protein BA_2500; virule 20.9 3.2E+02 0.011 22.9 7.2 49 213-270 34-88 (120)
10 3mbr_X Glutamine cyclotransfer 20.1 2.5E+02 0.0086 26.3 7.5 88 397-491 31-143 (243)
No 1
>3npe_A 9-CIS-epoxycarotenoid dioxygenase 1, chloroplasti; seven blade beta propeller, abscisic acid, non iron, oxidoreductase; 3.20A {Zea mays}
Probab=100.00 E-value=9.6e-125 Score=1016.69 Aligned_cols=487 Identities=37% Similarity=0.690 Sum_probs=434.9
Q ss_pred cCCCCCCCCCCCcccCCCccccccCCCCCCeeeecCCCCCceEEEeecCCCCCCCCCCCccccCCCcEEEEEEecCeE-E
Q 040986 21 DRPLHPSVDPKHVFTGNFAPVDELGPTECPVVDGKLPDSLTGMYIRNGPNPQHMPRGPLHFFEGDGMLHSMQLSKGRA-I 99 (514)
Q Consensus 21 ~~~~~~~~~~~~~l~g~~~p~~e~~~~~~~~v~G~iP~~L~Gtl~RnGP~~~~~~~~~~H~FDGdGmv~~~~f~~G~v-~ 99 (514)
+.+++.+++|+.+|+|+|+|++||.+...++|+|+||+||+|||||||||+.+.+...+||||||||||+|+|+||+| +
T Consensus 35 ~~~~~~~~~~~~~l~g~fapv~ee~~~~~l~V~G~IP~~L~Gt~~RNGpnP~f~~~~~~HwFDGdGmlh~~~f~~G~a~~ 114 (529)
T 3npe_A 35 PHGLPSTADPAVQIAGNFAPVGERPPVHELPVSGRIPPFIDGVYARNGANPCFDPVAGHHLFDGDGMVHALRIRNGAAES 114 (529)
T ss_dssp TSCCCTTTCHHHHTSGGGSCCCCEEEEESCCEEECCCTTCEEEEEECCBCCSSCCSSCCCGGGSCBEEEEEEEETTEEEE
T ss_pred cCCCCCCCCccchhccCcccccccCCcccceEeecCCccCCceEEEecCCcCcCCcCCCccCCCCceEEEEEECCCccce
Confidence 456788999999999999999999888788999999999999999999998776667799999999999999999999 9
Q ss_pred EEEEeecchhhHHHHhcCCcCCCCcccccCCcchhhhhhhhhhhhhhcccCCCCCcccceeEEEEeCCeEEEEeeCCCCe
Q 040986 100 YTSRYVKTYKYKLERDAGGQIFPNVFSGFYGLVDMVQCVASTARVLMGHVNLKKGFGLANTSLAFFSSKLLALGESDLPY 179 (514)
Q Consensus 100 y~~R~vrT~~~~~e~~ag~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aNt~v~~~~grllAl~E~g~P~ 179 (514)
|+||||||++|++|+++||++|++.+++..+.+++.|....+.+...+..+..+.+|+|||||++|+||||||||+|.||
T Consensus 115 y~nRfVrT~~~~~e~~agr~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~ANtnvv~~~g~llAl~E~g~Py 194 (529)
T 3npe_A 115 YACRFTETARLRQERAIGRPVFPKAIGELHGHSGIARLALFYARAACGLVDPSAGTGVANAGLVYFNGRLLAMSEDDLPY 194 (529)
T ss_dssp EEEEECCCHHHHHHHHHTSCCSCCTTTTTTSSTHHHHHHHHHHHHHTTSCCGGGCCCCCCSCEEEETTEEEECCTTSCCE
T ss_pred EEEeEecCHHHHHHHHcCCcccccccccccccchhhhhhhhhhhcccccccccccCCCCeEEEEEECCEEEEEEcCCCce
Confidence 99999999999999999999999888887766666666554555444444444456899999999999999999999999
Q ss_pred EEecCCCCCcceeeeccCCccccccCCCCceecCCCCeEEEEEecCCCCCeEEEEEEcCCCCeeeeEeeeecCCcceeee
Q 040986 180 IINCTREGDIETLGRWDFDEELFASMTAHPKTDMTTKETFAFKFSPFFSPHLTFSRFDANGVKQKDVPILSINRPTFIHD 259 (514)
Q Consensus 180 ~ld~~~~~TLeT~g~~~~~~~l~~~~tAHPk~Dp~tG~l~~f~~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~iHd 259 (514)
+++++++.||||+|.+||+|+|+..||||||+||.||||++|+|+...+|+++|++++++|++.+.+++ +++.++||||
T Consensus 195 ~~~idp~~tLeT~G~~d~~g~l~~~~tAHPk~Dp~TGel~~f~y~~~~~p~~~~~~~~~~G~~~~~~~i-~~~~p~~~HD 273 (529)
T 3npe_A 195 HVRVADDGDLETVGRYDFDGQLGCAMIAHPKLDPATGELHALSYDVIKRPYLKYFYFRPDGTKSDDVEI-PLEQPTMIHD 273 (529)
T ss_dssp EEEECTTSCEEEEEECCGGGCCCSCCCSCCEECTTTCCEEEEECCSSSSCCCEEEEECTTCCBCCCEEC-CCSSCBCCCC
T ss_pred EEecCCCCCcceeeeeccCCccCCcccccCcCCCCCCcEEEEEeecCCCCcEEEEEECCCCCEEEEEEE-eCCCCceEee
Confidence 997754359999999999999998999999999999999999999877799999999999999888887 8999999999
Q ss_pred eeecCCEEEEEeCccccchhHHHhCCCCceEEcCCCCcEEEEEeCCCCCCCceEEEecCCeeeeeecceeeeCC-CeEEE
Q 040986 260 FAITKRFAIFSETQLAVSAANVMLGKGMPTVFDPEKVPRIGIILKYATSDAEMKWFNVPGFNAMHVFNAWENGE-DEVVL 338 (514)
Q Consensus 260 faiTeny~V~~~~P~~~~~~~~l~~~~~~~~~~~~~~t~~~vipR~~~~~~~v~~~~~~~~f~~H~~NAyE~~~-g~Ivv 338 (514)
|+|||||+||+++|+.+|+.+++ .+++++.|+|++++||+||||++++.+.++||++|+||+||++||||+++ |+||+
T Consensus 274 FaiTenyvVf~~~Pl~~~~~~~~-~g~~~~~~~p~~~tr~~VipR~~~~~~~vrw~e~~~~f~fH~~NA~Ee~~~~~ivv 352 (529)
T 3npe_A 274 FAITENLVVVPDHQVVFKLQEML-RGGSPVVLDAAKTSRFGVLPKHAADASEMAWVDVPDCFCFHLWNAWEDEATGEVVV 352 (529)
T ss_dssp CEECSSEEEEEECSEEECGGGGT-TTCCSEEECTTSCCEEEEEETTCSSGGGCEEEECTTCEEEEEEEEEEETTTTEEEE
T ss_pred EEecCCeEEEEeCCeEEcHHHHh-CCCCceEECCCCCcEEEEEECCCCCCCceEEEEcCCEEEEEecccEecCCCCeEEE
Confidence 99999999999999999999987 56789999999999999999997665689999999999999999999853 78999
Q ss_pred EEEecCCchhhhhh-cccccceEEEEEEeCCCCceEEEeec----cCCccccccCCCCCCCCCceEEEeecccCCCCCeE
Q 040986 339 IATNATSIENLFLK-VDMVHISLEKVRINLRTGNVSRNILS----ARNLELGSINSSYIGKKNRYVFVGVGKEIPKMQGV 413 (514)
Q Consensus 339 d~~~~~~~~~~~~~-~~~~~~~l~R~~idl~tg~v~~~~l~----~~~~EfP~In~~~~gr~yry~Y~~~~~~~~~~~~l 413 (514)
|.|++.+.+.++.. .+..+++|+||+||+++|+++++.|. +.++|||+||++|.||+|||+|+++.++...+++|
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~l~r~rl~l~~g~~~~~~l~~~~~~~~~EfP~In~~~~Gr~~Ry~Y~~~~~~~~~~~~l 432 (529)
T 3npe_A 353 IGSCMTPADSIFNESDERLESVLTEIRLDARTGRSTRRAVLPPSQQVNLEVGMVNRNLLGRETRYAYLAVAEPWPKVSGF 432 (529)
T ss_dssp EEEEECCCCCSCCSSSSCCCCEEEEEEECTTTCCEEEEESSCSSSCCCEEEEEECGGGTTSCCSEEEEEECCSTTSCCEE
T ss_pred EEecccCchhhhhccchhhccceEEEEEcCCCCCEEeEEecccccCccccCceEChhHcCCccceEEEeccCCCCCcceE
Confidence 88887665443332 24567899999999999999988887 48999999999999999999999987766778999
Q ss_pred EEEeCCCCeEEEEEEcCCCCcCCCcEEeecCCCCCCCCCCCCcEEEEEEEeCCCCeeeEEEEeCCCCCCceeEEEEcCCc
Q 040986 414 VKIDLEKEIEVSRRFYGPGCFGGEPLFVPRNGDHVDAADEDDGFVVTYIHDENYGESKFLVMDAKSPNLDIVAAVKLPRR 493 (514)
Q Consensus 414 ~k~D~~~g~~~~~~~~~~~~~~~EPvFVPrp~~~~~~~~EDDG~ll~~v~d~~~~~S~l~VlDA~~~~~gpVAr~~LP~~ 493 (514)
+|+|++||+ .+.||+++++++|||||||||++.+.+.+|||||||++|+|..+++|+|+||||++| .+|||++||++
T Consensus 433 ~K~D~~tg~-~~~~~~g~~~~~~EPvFVPrp~~~~~~~~EDDG~lLs~V~d~~~~~S~LlILDA~~l--~~vArv~LP~r 509 (529)
T 3npe_A 433 AKVDLSTGE-LTKFEYGEGRFGGEPCFVPMDPAAAHPRGEDDGYVLTFVHDERAGTSELLVVNAADM--RLEATVQLPSR 509 (529)
T ss_dssp EEEETTTCC-EEEEECCTTBCCCCCEEEECCSCSSSSCCTTCEEEEEEEEBSSCCCEEEEEEETTTT--EEEEEEEESSC
T ss_pred EEEecCCCc-eEEEEcCCCccccCCEeeeCCCCCCCCCCCCCcEEEEEEEECCCCcEEEEEEeCCCC--ccceEEECCCC
Confidence 999999998 789999999999999999999610001699999999999999999999999999998 57999999999
Q ss_pred CCCCcCccccCCccccccc
Q 040986 494 VPYGFHGLFVHEENHSNQK 512 (514)
Q Consensus 494 vP~GfHG~w~~~~~~~~~~ 512 (514)
||+||||+|++.++|.+|.
T Consensus 510 vP~GfHG~wv~~~~l~~q~ 528 (529)
T 3npe_A 510 VPFGFHGTFITGQELEAQA 528 (529)
T ss_dssp CCCCSCEEEEEHHHHTTCC
T ss_pred CCCCccccccCHHHhhhhh
Confidence 9999999999999998885
No 2
>2biw_A Apocarotenoid-cleaving oxygenase; non-heme iron, carotenoid cleavage, retinal forma oxidoreductase, dioxygenase; HET: 3ON; 2.39A {Synechocystis SP} PDB: 2bix_A*
Probab=100.00 E-value=7.3e-116 Score=942.18 Aligned_cols=446 Identities=27% Similarity=0.450 Sum_probs=393.2
Q ss_pred cCCCccccccCCCCCCeeeecCCCCCceEEEeecCCCCCC-CCCCCccccCCCcEEEEEE-ecCeEEEEEEeecchhhHH
Q 040986 35 TGNFAPVDELGPTECPVVDGKLPDSLTGMYIRNGPNPQHM-PRGPLHFFEGDGMLHSMQL-SKGRAIYTSRYVKTYKYKL 112 (514)
Q Consensus 35 ~g~~~p~~e~~~~~~~~v~G~iP~~L~Gtl~RnGP~~~~~-~~~~~H~FDGdGmv~~~~f-~~G~v~y~~R~vrT~~~~~ 112 (514)
+++|+|+.+|.+..+..|+|+||+||+|||||||||+++. +..++||||||||||+|+| ++|+|+|+||||||++|++
T Consensus 21 ~~~f~~~~~E~~~~l~~V~G~IP~~L~Gt~~RnGP~~~~~~~~~~~H~FDGdGmlh~~~f~~~G~v~y~~R~v~T~~~~~ 100 (490)
T 2biw_A 21 LRGYQSQPQEWDYWVEDVEGSIPPDLQGTLYRNGPGLLEIGDRPLKHPFDGDGMVTAFKFPGDGRVHFQSKFVRTQGYVE 100 (490)
T ss_dssp HHTTSCCCSCEEEECCCEEECCCTTCCEEEEECCBCCSEETTEECSSGGGSCBEEEEEEECSSSCCEEEEEECCCHHHHH
T ss_pred hhhccCccccCCcccceEEeCCCCCCCeEEEEeCCCcCcCCCCcccCccCCCCeEEEEEECCCCEEEEEcceEeCHHHHH
Confidence 4678899666555433499999999999999999999863 4567899999999999999 9999999999999999999
Q ss_pred HHhcCCcCCCCcccccCCcchhhhhhhhhhhhhhcccCCCCCcccceeEEEEeCCeEEEEeeCCCCeEEecCCCCCccee
Q 040986 113 ERDAGGQIFPNVFSGFYGLVDMVQCVASTARVLMGHVNLKKGFGLANTSLAFFSSKLLALGESDLPYIINCTREGDIETL 192 (514)
Q Consensus 113 e~~ag~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aNt~v~~~~grllAl~E~g~P~~ld~~~~~TLeT~ 192 (514)
|+++||++|++.|++..+.. .+. +.++ ...+|+|||||++|+||||||||+|.||+||+ .||||+
T Consensus 101 e~~ag~~~~~~~fg~~~~~~---~~~--------~~~~-~~~~~~aNT~v~~~~g~llAl~E~~~p~~ldp---~tLeT~ 165 (490)
T 2biw_A 101 EQKAGKMIYRGVFGSQPAGG---WLK--------TIFD-LRLKNIANTNITYWGDRLLALWEGGQPHRLEP---SNLATI 165 (490)
T ss_dssp HHHHTSCCSBCTTSCCCSST---HHH--------HTTC-CCBCCCCCSEEEEETTEEEEECTTSCCEEECT---TTCCEE
T ss_pred HHHhCCcccccccccCCCCc---hhh--------hhcc-cccCCCCEEEEEEECCEEEEEEcCCCCEeccc---ccccEe
Confidence 99999999998777654321 110 1111 12368999999999999999999999999986 599999
Q ss_pred eeccCCccc-c-ccCCCCceecCC------CCeEEEEEecCCCCCeEEEEEEcCCCCeeeeEeeeecCCcceeeeeeecC
Q 040986 193 GRWDFDEEL-F-ASMTAHPKTDMT------TKETFAFKFSPFFSPHLTFSRFDANGVKQKDVPILSINRPTFIHDFAITK 264 (514)
Q Consensus 193 g~~~~~~~l-~-~~~tAHPk~Dp~------tG~l~~f~~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~iHdfaiTe 264 (514)
|.++|+|.| + ..||||||+||. ||||++|+++......++|+++|++|++.+..++ +++.++|||||+|||
T Consensus 166 G~~d~~g~l~~~~~~tAHPk~Dp~~~~~~gtgel~~fg~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~HDfaiTe 244 (490)
T 2biw_A 166 GLDDLGGILAEGQPLSAHPRIDPASTFDGGQPCYVTFSIKSSLSSTLTLLELDPQGKLLRQKTE-TFPGFAFIHDFAITP 244 (490)
T ss_dssp EECCTTTTSCTTCCCCSCCEEESSCTTTTTCCEEEEEEEEESSEEEEEEEEECTTSCEEEEEEE-EEESCCCCCCCEECS
T ss_pred eeeccCCcccCCcccccCceECccccccCCCCeEEEEEecCCCCcEEEEEEECCCCCEEeeEEE-eCCCCceEeeeeccC
Confidence 999999999 5 479999999999 9999999999765455899999999999988886 899999999999999
Q ss_pred CEEEEEeCccccchhHHHhCC---CCceEEcCCCCcEEEEEeCCCCCCCceEEEecCCeeeeeecceeeeCCCeEEEEEE
Q 040986 265 RFAIFSETQLAVSAANVMLGK---GMPTVFDPEKVPRIGIILKYATSDAEMKWFNVPGFNAMHVFNAWENGEDEVVLIAT 341 (514)
Q Consensus 265 ny~V~~~~P~~~~~~~~l~~~---~~~~~~~~~~~t~~~vipR~~~~~~~v~~~~~~~~f~~H~~NAyE~~~g~Ivvd~~ 341 (514)
||+||+++|+.+|+.++++++ ..++.|+|++++||+||||+ + +.++||++|+||+||++||||+ +|+||+|+|
T Consensus 245 ny~V~~~~P~~~~~~~~~~g~~~~~~~~~~~p~~~tr~~VipR~-~--~~v~~f~~~~~f~fH~~NA~Ee-~~~Iv~d~~ 320 (490)
T 2biw_A 245 HYAIFLQNNVTLNGLPYLFGLRGAGECVQFHPDKPAQIILVPRD-G--GEIKRIPVQAGFVFHHANAFEE-NGKIILDSI 320 (490)
T ss_dssp SEEEEEECCEEECCHHHHTTSSCGGGGEEECTTSCEEEEEEETT-S--CCCEEEEECCCEEEEEEEEEEE-TTEEEEEEE
T ss_pred CEEEEEeCCeEEcHHHHhhccCCccceeEeCCCCCcEEEEEECC-C--CccEEEecCCCeEEecccceec-CCeEEEEEe
Confidence 999999999999999988544 35799999999999999998 3 4689999999999999999998 789999999
Q ss_pred ecCCchhh-----hhh---cccccceEEEEEEeCCCCceEEEeeccCCccccccCCCCCCCCCceEEEeecc---cCCCC
Q 040986 342 NATSIENL-----FLK---VDMVHISLEKVRINLRTGNVSRNILSARNLELGSINSSYIGKKNRYVFVGVGK---EIPKM 410 (514)
Q Consensus 342 ~~~~~~~~-----~~~---~~~~~~~l~R~~idl~tg~v~~~~l~~~~~EfP~In~~~~gr~yry~Y~~~~~---~~~~~ 410 (514)
++++...+ +.. ....+++|+||+||+++|+++++.|++.++|||+||++|.||+|||+|+++.+ ....+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~R~~i~l~~g~v~~~~l~~~~~EfP~In~~~~G~~~Ry~Y~~~~~~~~~~~~~ 400 (490)
T 2biw_A 321 CYNSLPQVDTDGDFRSTNFDNLDPGQLWRFTIDPAAATVEKQLMVSRCCEFPVVHPQQVGRPYRYVYMGAAHHSTGNAPL 400 (490)
T ss_dssp EESCCCCCCTTCCGGGCCGGGSCCCEEEEEEEETTTTEEEEEEEECSCEEEEECCGGGTTSCCSEEEEEECSSSSSCCCC
T ss_pred ccCCcccccccccccccccccCCCceEEEEEEECCCCceEEEeccCCcccccccChhhCCceeeeEEEEeecCCCCCCCC
Confidence 99875421 111 12356899999999999999999999999999999999999999999998775 34568
Q ss_pred CeEEEEeCCCCeEEEEEEcCCCCcCCCcEEeecCCCCCCCCCCCCcEEEEEEEeCCCCeeeEEEEeCCCCCCceeEEEEc
Q 040986 411 QGVVKIDLEKEIEVSRRFYGPGCFGGEPLFVPRNGDHVDAADEDDGFVVTYIHDENYGESKFLVMDAKSPNLDIVAAVKL 490 (514)
Q Consensus 411 ~~l~k~D~~~g~~~~~~~~~~~~~~~EPvFVPrp~~~~~~~~EDDG~ll~~v~d~~~~~S~l~VlDA~~~~~gpVAr~~L 490 (514)
++|+|+|+++|+ .+.|++++++++|||+|||||++ .+|||||||++|+|.++++|+|+||||++|+++||||++|
T Consensus 401 ~~l~K~D~~tg~-~~~~~~g~g~~~~EPvFVPrp~~----~~EDDG~ll~~V~d~~~~~S~l~IlDA~~~~~~pvArv~l 475 (490)
T 2biw_A 401 QAILKVDLESGT-ETLRSFAPHGFAGEPIFVPRPGG----VAEDDGWLLCLIYKADLHRSELVILDAQDITAPAIATLKL 475 (490)
T ss_dssp CEEEEEETTTTE-EEEEECTTTEECCCCEEEECTTC----CSTTCEEEEEEEEETTTTEEEEEEEETTCTTSCCSEEEEC
T ss_pred CeEEEEECCCCC-EEEEECCCCccccCCEEecCCCC----CCCCCcEEEEEEEeCCCCceeEEEEccCCCCcCceEEEeC
Confidence 999999999998 78999999999999999999975 6999999999999999999999999999999999999999
Q ss_pred CCcCCCCcCccccCC
Q 040986 491 PRRVPYGFHGLFVHE 505 (514)
Q Consensus 491 P~~vP~GfHG~w~~~ 505 (514)
|++||+||||+|++.
T Consensus 476 P~rvP~GfHG~wv~~ 490 (490)
T 2biw_A 476 KHHIPYPLHGSWAQT 490 (490)
T ss_dssp SSCCCCCCCEEEEEC
T ss_pred CCcCCCCccccccCC
Confidence 999999999999863
No 3
>3kvc_A Retinoid isomerohydrolase; 7-bladed beta-propeller, monotopic membrane protein, sensory transduction, vision, isomerase, non-heme iron protein; 1.90A {Bos taurus} PDB: 3fsn_A 4f2z_A 4f30_A 4f3a_A 4f3d_A
Probab=100.00 E-value=1e-110 Score=910.65 Aligned_cols=456 Identities=19% Similarity=0.264 Sum_probs=367.4
Q ss_pred CCCcccCCCccccccCCCCCCeeeecCCCCCceEEEeecCCCCC-CCCCCCccccCCCcEEEEEEecCeEEEEEEeecch
Q 040986 30 PKHVFTGNFAPVDELGPTECPVVDGKLPDSLTGMYIRNGPNPQH-MPRGPLHFFEGDGMLHSMQLSKGRAIYTSRYVKTY 108 (514)
Q Consensus 30 ~~~~l~g~~~p~~e~~~~~~~~v~G~iP~~L~Gtl~RnGP~~~~-~~~~~~H~FDGdGmv~~~~f~~G~v~y~~R~vrT~ 108 (514)
+..-+...|+|++|+++...+.|+|+||+||+|||||||||++. ++..++||||||||||+|+|++|+|+|+||||||+
T Consensus 8 ~~~~~~~~f~~~~E~~~p~~l~V~G~IP~~L~Gtl~RNGPg~~~~g~~~~~HwFDGdGmlh~~~~~~G~v~y~~R~v~T~ 87 (533)
T 3kvc_A 8 PAGGYKKLFETVEELSSPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEGHVTYHRRFIRTD 87 (533)
T ss_dssp TTCGGGGGGSCCCCCSSCEECEEEECCCTTCCEEEEEEEECCCEETTEECCBTTTSCEEEEEEEEETTEEEEEEEECCCH
T ss_pred CcchhhhhcCcccccCCceeeeEEeeCCCCCceEEEEeCCCccccCCcccccccCCCCEEEEEEEeCCEEEEEEEEecCH
Confidence 33455788999999888778999999999999999999999875 44557899999999999999999999999999999
Q ss_pred hhHHHHhcCCcCCCCcccccCCcchhhhhhhhhhhhhhcccCCCCCcccceeEEEEeCCeEEEEeeCCCCeEEecCCCCC
Q 040986 109 KYKLERDAGGQIFPNVFSGFYGLVDMVQCVASTARVLMGHVNLKKGFGLANTSLAFFSSKLLALGESDLPYIINCTREGD 188 (514)
Q Consensus 109 ~~~~e~~ag~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aNt~v~~~~grllAl~E~g~P~~ld~~~~~T 188 (514)
+|++|+++||++|++ |++...+ .+|...+.+.+ ..+...+.+|+|||||++|+||||||||++.||+||+ +|
T Consensus 88 ~~~~e~~agr~~~~~-fg~~~~~---~p~~~~~~~~~-~~~~~~~~~~~ANt~v~~~~g~LlAl~E~~~p~~iDp---~t 159 (533)
T 3kvc_A 88 AYVRAMTEKRIVITE-FGTCAFP---DPCKNIFSRFF-SYFRGVEVTDNALVNIYPVGEDYYACTETNFITKVNP---ET 159 (533)
T ss_dssp HHHHHHHHTSCCSCB-TTBCC-----------------------CCCCCCCSEEEEETTEEEEECSSSEEEEECT---TT
T ss_pred HHHHHHHcCCcceec-cCcccCC---cchhhHHHHHH-HhhccCCCCCCCEEEEEEECCEEEEEEcCCcCEEeCh---HH
Confidence 999999999999988 7764321 11111111111 1111113468999999999999999999999999986 49
Q ss_pred cceeeeccCCcccc-ccCCCCceecCCCCeEEEEEecCCCC--CeEEEEEEcCCC-----Ceee-----eEeeeecCCcc
Q 040986 189 IETLGRWDFDEELF-ASMTAHPKTDMTTKETFAFKFSPFFS--PHLTFSRFDANG-----VKQK-----DVPILSINRPT 255 (514)
Q Consensus 189 LeT~g~~~~~~~l~-~~~tAHPk~Dp~tG~l~~f~~~~~~~--~~~~~~~~d~~g-----~~~~-----~~~~~~~~~~~ 255 (514)
|||+|.+||++.|+ ..||||||+|| |||++||+++.+.+ +.+.++++++++ .+.+ .++..+++.|+
T Consensus 160 LeT~G~~d~~g~l~~~~~tAHPk~Dp-tGel~~fg~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~v~~~i~~~~~~~p~ 238 (533)
T 3kvc_A 160 LETIKQVDLCNYVSVNGATAHPHIEN-DGTVYNIGNCFGKNFSIAYNIVKIPPLQADKEDPISKSEIVVQFPCSDRFKPS 238 (533)
T ss_dssp CCEEEEEEHHHHSSCSCCCSCCEECT-TSCEEEEEEECC---CCEEEEEEECCCCTTCCCGGGGCEEEEEEECSSTTCCB
T ss_pred cccccccccCCccCCCccCCCCccCC-CCCEEEEeeccCCCCCcEEEEEEECccccccccccccceeEEeeccccCCCCc
Confidence 99999999999997 56999999999 99999999987653 678888888652 1211 12222456899
Q ss_pred eeeeeeecCCEEEEEeCccccchhHHHhC----CC---CceEEcCCCCcEEEEEeCCCCCCCceEEEecCCeeeeeecce
Q 040986 256 FIHDFAITKRFAIFSETQLAVSAANVMLG----KG---MPTVFDPEKVPRIGIILKYATSDAEMKWFNVPGFNAMHVFNA 328 (514)
Q Consensus 256 ~iHdfaiTeny~V~~~~P~~~~~~~~l~~----~~---~~~~~~~~~~t~~~vipR~~~~~~~v~~~~~~~~f~~H~~NA 328 (514)
|||||+|||||+||+++|+.+|+.+++.+ +. +++.|+|++++||+||||++++ ..++||++++||+||++||
T Consensus 239 ~iHDFaiTeny~Vf~~~P~~~~~~~~~~g~~~~~~~~~~~~~~~p~~~tr~~VipR~~~~-~~~~~~~~~~~f~fH~~NA 317 (533)
T 3kvc_A 239 YVHSFGLTPNYIVFVETPVKINLFKFLSSWSLWGANYMDCFESNETMGVWLHIADKKRKK-YINNKYRTSPFNLFHHINT 317 (533)
T ss_dssp CCCCCEECSSEEEEEECSEEEC-----------CCCSGGGEEECSSCCEEEEEEETTTTE-EEEEEEEECCEEEEEEEEE
T ss_pred eeeeeeecCCEEEEEeCCeEEcHHHHhhcccccCCChHHheeecCCCCcEEEEEECCCCC-cccEEEEeCCeeEEeeeee
Confidence 99999999999999999999999998765 33 3799999999999999999753 2357899999999999999
Q ss_pred eeeCCCeEEEEEEecCC-chhh----hhhc------------ccccceEEEEEEeCCCC---------------------
Q 040986 329 WENGEDEVVLIATNATS-IENL----FLKV------------DMVHISLEKVRINLRTG--------------------- 370 (514)
Q Consensus 329 yE~~~g~Ivvd~~~~~~-~~~~----~~~~------------~~~~~~l~R~~idl~tg--------------------- 370 (514)
||+ +|+||+|+|+|++ ...+ ++++ ....++|+||+||++++
T Consensus 318 ~Ee-~~~Iv~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~R~~l~l~~~~~~~~~nl~~~~~~~~~a~~~ 396 (533)
T 3kvc_A 318 YED-HEFLIVDLCCWKGFEFVYNYLYLANLRENWEEVKKNARKAPQPEVRRYVLPLNIDKADTGKNLVTLPNTTATAILC 396 (533)
T ss_dssp EEE-TTEEEEEEEEEESSSCGGGGCBHHHHTSCHHHHHHHHTTSCEEEEEEEEEESCCCGGGTTSBCCCCTTCCCEEEEC
T ss_pred EEe-CCEEEEEEeeeCCchhhhhhhhhhhhcccchhccccccccCCceEEEEEEeCCcccccccccccccccccceeeec
Confidence 998 7899999999987 3211 0111 13567899999999874
Q ss_pred ---c--eEEEeecc--C-CccccccCC-CCCCCCCceEEEeecccCCCCCeEEEEeCCCCeEEEEEEcCCCCcCCCcEEe
Q 040986 371 ---N--VSRNILSA--R-NLELGSINS-SYIGKKNRYVFVGVGKEIPKMQGVVKIDLEKEIEVSRRFYGPGCFGGEPLFV 441 (514)
Q Consensus 371 ---~--v~~~~l~~--~-~~EfP~In~-~~~gr~yry~Y~~~~~~~~~~~~l~k~D~~~g~~~~~~~~~~~~~~~EPvFV 441 (514)
+ ++++.|.+ . ++|||+||+ +|.||+|||+|+++.+. ..+++|+|+|++||+ . +.|.++++++||||||
T Consensus 397 ~~~~~~~~~~~l~~~~~~~~EfP~In~~~~~Gr~~Ry~Y~~~~~~-~~~~~l~K~D~~tg~-~-~~w~~~~~~~~EPiFV 473 (533)
T 3kvc_A 397 SDETIWLEPEVLFSGPRQAFEFPQINYQKYGGKPYTYAYGLGLNH-FVPDRLCKLNVKTKE-T-WVWQEPDSYPSEPIFV 473 (533)
T ss_dssp TTSEEEEECEEEECBTTEEEEEEECCHHHHTTSCCCEEEEEEEET-TEEEEEEEEETTTCC-E-EEECCTTCBCCCCEEE
T ss_pred cCCceeeeeeeeccCCcccccCceECHHHhCCCcccEEEEeccCC-CCCceeEEEEcCCCC-E-EEEeCCCccccCceee
Confidence 2 44566774 6 899999999 79999999999987663 567999999999997 4 4567999999999999
Q ss_pred ecCCCCCCCCCCCCcEEEEEEEeCCC--CeeeEEEEeCCCCCCceeEEEEcCCcCCCCcCccccCC
Q 040986 442 PRNGDHVDAADEDDGFVVTYIHDENY--GESKFLVMDAKSPNLDIVAAVKLPRRVPYGFHGLFVHE 505 (514)
Q Consensus 442 Prp~~~~~~~~EDDG~ll~~v~d~~~--~~S~l~VlDA~~~~~gpVAr~~LP~~vP~GfHG~w~~~ 505 (514)
|||++ ++|||||||++|+|..+ ++|+|+||||++| ++|||++||++||+||||+|++.
T Consensus 474 Prp~~----~~EDDG~lLs~V~d~~~~~~~s~LlILDA~~l--~~vArv~lP~rvP~GfHG~w~~~ 533 (533)
T 3kvc_A 474 SHPDA----LEEDDGVVLSVVVSPGAGQKPAYLLILNAKDL--SEVARAEVEINIPVTFHGLFKKS 533 (533)
T ss_dssp ECTTC----CSTTCEEEEEEEECCSTTSCSEEEEEEETTTC--CEEEEEEESSCCCCCCEEEEEEC
T ss_pred cCCCC----CCCCCcEEEEEEEeCCcCCCccEEEEEeCCCC--hhhEEEEeCCCCCCCccccccCC
Confidence 99975 69999999999999985 6679999999998 47999999999999999999863
No 4
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=49.18 E-value=2.6e+02 Score=29.49 Aligned_cols=104 Identities=15% Similarity=0.156 Sum_probs=61.2
Q ss_pred EEEEeCCCCceEEEeeccCCccccccCCCCCCCCCceEEEeecccCCCCCeEEEEeCC--CCeEEEEEEcCCCCcCCCcE
Q 040986 362 KVRINLRTGNVSRNILSARNLELGSINSSYIGKKNRYVFVGVGKEIPKMQGVVKIDLE--KEIEVSRRFYGPGCFGGEPL 439 (514)
Q Consensus 362 R~~idl~tg~v~~~~l~~~~~EfP~In~~~~gr~yry~Y~~~~~~~~~~~~l~k~D~~--~g~~~~~~~~~~~~~~~EPv 439 (514)
-..||+.|+++..+.-.........+.+ .-||+|.++. -+.|..+|+. +++....... ..+|.
T Consensus 179 V~viD~~t~~v~~~i~~g~~p~~v~~Sp-----DGr~lyv~~~-----dg~V~viD~~~~t~~~v~~i~~-----G~~P~ 243 (567)
T 1qks_A 179 IALIDGSTYEIKTVLDTGYAVHISRLSA-----SGRYLFVIGR-----DGKVNMIDLWMKEPTTVAEIKI-----GSEAR 243 (567)
T ss_dssp EEEEETTTCCEEEEEECSSCEEEEEECT-----TSCEEEEEET-----TSEEEEEETTSSSCCEEEEEEC-----CSEEE
T ss_pred EEEEECCCCeEEEEEeCCCCccceEECC-----CCCEEEEEcC-----CCeEEEEECCCCCCcEeEEEec-----CCCCc
Confidence 5568888887765432222223333433 3468886642 2579999995 7764443332 23454
Q ss_pred EeecCCCCCCCCC-CCCcEEEEEEEeCCCCeeeEEEEeCCCCCCceeEEEEcC
Q 040986 440 FVPRNGDHVDAAD-EDDGFVVTYIHDENYGESKFLVMDAKSPNLDIVAAVKLP 491 (514)
Q Consensus 440 FVPrp~~~~~~~~-EDDG~ll~~v~d~~~~~S~l~VlDA~~~~~gpVAr~~LP 491 (514)
-+.=.. -. -|..||++.-+.. ..+.|+|+.++ .++.++.+.
T Consensus 244 ~ia~s~-----~~~pDGk~l~v~n~~~----~~v~ViD~~t~--~~~~~i~~~ 285 (567)
T 1qks_A 244 SIETSK-----MEGWEDKYAIAGAYWP----PQYVIMDGETL--EPKKIQSTR 285 (567)
T ss_dssp EEEECC-----STTCTTTEEEEEEEET----TEEEEEETTTC--CEEEEEECC
T ss_pred eeEEcc-----ccCCCCCEEEEEEccC----CeEEEEECCCC--cEEEEEecc
Confidence 333210 00 2445888776653 56889999996 789888764
No 5
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=34.28 E-value=1.9e+02 Score=29.49 Aligned_cols=79 Identities=18% Similarity=0.099 Sum_probs=47.6
Q ss_pred ceEEEeecccCCCCCeEEEEeCCCCeEEEEEEcCCCCcCCCcEEeecCCCCCCCCCCCCcEEEEEEEeCC-----CCeee
Q 040986 397 RYVFVGVGKEIPKMQGVVKIDLEKEIEVSRRFYGPGCFGGEPLFVPRNGDHVDAADEDDGFVVTYIHDEN-----YGESK 471 (514)
Q Consensus 397 ry~Y~~~~~~~~~~~~l~k~D~~~g~~~~~~~~~~~~~~~EPvFVPrp~~~~~~~~EDDG~ll~~v~d~~-----~~~S~ 471 (514)
+++|.+........+.|..+|..+++.......| . +|=++-.| |..+|.+.-.... .....
T Consensus 85 ~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG--~---~Pgia~Sp---------Dgk~lyVan~~~~~~~~G~~~~~ 150 (426)
T 3c75_H 85 RRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGG--F---LPHPVAAE---------DGSFFAQASTVFERIARGKRTDY 150 (426)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC--S---SCEEEECT---------TSSCEEEEEEEEEETTEEEEEEE
T ss_pred CEEEEECCCcCCCCCeEEEEECCCCEEEEEEECC--C---CCceEECC---------CCCEEEEEeccccccccCCCCCE
Confidence 5688765432111179999999999855555443 2 34233333 2234544433211 12347
Q ss_pred EEEEeCCCCCCceeEEEEcC
Q 040986 472 FLVMDAKSPNLDIVAAVKLP 491 (514)
Q Consensus 472 l~VlDA~~~~~gpVAr~~LP 491 (514)
+.|+|+++. ..++++.+|
T Consensus 151 VsviD~~t~--~vv~~I~v~ 168 (426)
T 3c75_H 151 VEVFDPVTF--LPIADIELP 168 (426)
T ss_dssp EEEECTTTC--CEEEEEEET
T ss_pred EEEEECCCC--cEEEEEECC
Confidence 999999995 789999997
No 6
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=32.28 E-value=96 Score=33.40 Aligned_cols=82 Identities=12% Similarity=-0.000 Sum_probs=50.0
Q ss_pred CceEEEeecccCCCCCeEEEEeCCCCeEEEEEEcCCCCcCCCcEEeecCCCCCCCCCCCCcEEEEEE-------------
Q 040986 396 NRYVFVGVGKEIPKMQGVVKIDLEKEIEVSRRFYGPGCFGGEPLFVPRNGDHVDAADEDDGFVVTYI------------- 462 (514)
Q Consensus 396 yry~Y~~~~~~~~~~~~l~k~D~~~g~~~~~~~~~~~~~~~EPvFVPrp~~~~~~~~EDDG~ll~~v------------- 462 (514)
-||+|.+..+. +.|+++|+.+.+..+....+.+.-+ +-+.+-+ -.|-+||++..
T Consensus 101 G~~lfVnd~~~----~rVavIdl~t~~~~~ii~ip~g~~p-hg~~~~~--------~p~~~~v~~~~~~~~p~~~dg~~l 167 (595)
T 1fwx_A 101 GRFLFMNDKAN----TRVARVRCDVMKCDAILEIPNAKGI-HGLRPQK--------WPRSNYVFCNGEDETPLVNDGTNM 167 (595)
T ss_dssp EEEEEEEETTT----TEEEEEETTTTEEEEEEECSSCCSE-EEEEECC--------SSBCSEEEEEECSCEESSCSSSST
T ss_pred CCEEEEEcCCC----CEEEEEECCCceEeeEEeCCCCCCC-cceeeee--------cCCCcEEEEecccccccCCCCccc
Confidence 47888754332 6799999999874444444433321 2222212 02445665552
Q ss_pred EeCCCCeeeEEEEeCCCCCCceeEEEEcCC
Q 040986 463 HDENYGESKFLVMDAKSPNLDIVAAVKLPR 492 (514)
Q Consensus 463 ~d~~~~~S~l~VlDA~~~~~gpVAr~~LP~ 492 (514)
++.+...+.+-++|+.++ ..++++.++-
T Consensus 168 ~~~~~~~~~vtvID~~t~--~v~~qI~Vgg 195 (595)
T 1fwx_A 168 EDVANYVNVFTAVDADKW--EVAWQVLVSG 195 (595)
T ss_dssp TCGGGEEEEEEEEETTTT--EEEEEEEESS
T ss_pred ccccccCceEEEEECCCC--eEEEEEEeCC
Confidence 123355678999999986 8899999864
No 7
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=31.46 E-value=2.3e+02 Score=26.96 Aligned_cols=96 Identities=13% Similarity=0.109 Sum_probs=0.0
Q ss_pred EEeCCCCceEEEeeccCCccccccCCCCCCCCCceEEEeecccCCCCCeEEEEeCCCCeEEEEEEcCCCCcCCCcEEeec
Q 040986 364 RINLRTGNVSRNILSARNLELGSINSSYIGKKNRYVFVGVGKEIPKMQGVVKIDLEKEIEVSRRFYGPGCFGGEPLFVPR 443 (514)
Q Consensus 364 ~idl~tg~v~~~~l~~~~~EfP~In~~~~gr~yry~Y~~~~~~~~~~~~l~k~D~~~g~~~~~~~~~~~~~~~EPvFVPr 443 (514)
++|++||++..+.-.+ ++.-..=....-+..|.+.... +.+..+|.++.+....+.++.
T Consensus 69 ~vD~~Tgkv~~~~~l~-----~~~FgeGit~~g~~ly~ltw~~----~~v~v~D~~t~~~~~ti~~~~------------ 127 (262)
T 3nol_A 69 KVDIESGKTLQQIELG-----KRYFGEGISDWKDKIVGLTWKN----GLGFVWNIRNLRQVRSFNYDG------------ 127 (262)
T ss_dssp EECTTTCCEEEEEECC-----TTCCEEEEEEETTEEEEEESSS----SEEEEEETTTCCEEEEEECSS------------
T ss_pred EEECCCCcEEEEEecC-----CccceeEEEEeCCEEEEEEeeC----CEEEEEECccCcEEEEEECCC------------
Q ss_pred CCCCCCCCCCCCcEEEEEEEeCCCCeeeEEEEeCCCCCCceeEEEEc
Q 040986 444 NGDHVDAADEDDGFVVTYIHDENYGESKFLVMDAKSPNLDIVAAVKL 490 (514)
Q Consensus 444 p~~~~~~~~EDDG~ll~~v~d~~~~~S~l~VlDA~~~~~gpVAr~~L 490 (514)
.|.+ -..|.+.|++. ++.+.|.++|+.++ ..++++.+
T Consensus 128 eG~g---lt~dg~~L~~S-----dGs~~i~~iDp~T~--~v~~~I~V 164 (262)
T 3nol_A 128 EGWG---LTHNDQYLIMS-----DGTPVLRFLDPESL--TPVRTITV 164 (262)
T ss_dssp CCCC---EEECSSCEEEC-----CSSSEEEEECTTTC--SEEEEEEC
T ss_pred CceE---EecCCCEEEEE-----CCCCeEEEEcCCCC--eEEEEEEe
No 8
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=22.63 E-value=1.2e+02 Score=28.68 Aligned_cols=35 Identities=9% Similarity=0.338 Sum_probs=26.8
Q ss_pred EEEeCCeEEEEe-eCCCCeEEecCCCCCcceeeeccCCc
Q 040986 162 LAFFSSKLLALG-ESDLPYIINCTREGDIETLGRWDFDE 199 (514)
Q Consensus 162 v~~~~grllAl~-E~g~P~~ld~~~~~TLeT~g~~~~~~ 199 (514)
+...+++||.++ ..+.-+.+|. .||+.++.+.+.+
T Consensus 70 i~~~~~~ly~ltw~~~~v~v~D~---~tl~~~~ti~~~~ 105 (243)
T 3mbr_X 70 IVAWRDRLIQLTWRNHEGFVYDL---ATLTPRARFRYPG 105 (243)
T ss_dssp EEEETTEEEEEESSSSEEEEEET---TTTEEEEEEECSS
T ss_pred EEEeCCEEEEEEeeCCEEEEEEC---CcCcEEEEEeCCC
Confidence 556789999665 5667888886 5999999887754
No 9
>4guc_A Protein BA_2500; virulence, pathogenesis, vaccine candidate, center for struc genomics of infectious diseases, csgid, niaid; HET: PGE; 1.40A {Bacillus anthracis}
Probab=20.93 E-value=3.2e+02 Score=22.85 Aligned_cols=49 Identities=10% Similarity=0.079 Sum_probs=34.8
Q ss_pred CCCCeEEEEEecCCC--CCeEEEEEEc----CCCCeeeeEeeeecCCcceeeeeeecCCEEEEE
Q 040986 213 MTTKETFAFKFSPFF--SPHLTFSRFD----ANGVKQKDVPILSINRPTFIHDFAITKRFAIFS 270 (514)
Q Consensus 213 p~tG~l~~f~~~~~~--~~~~~~~~~d----~~g~~~~~~~~~~~~~~~~iHdfaiTeny~V~~ 270 (514)
-.||..+.+....+. ...+.+|++. ++|.+.|-. .|||...+.+|.+|-
T Consensus 34 lktGdtf~it~~~~~~d~g~~KIyrv~~~~~~~g~L~RYk---------TI~d~~~~~~~~~f~ 88 (120)
T 4guc_A 34 LKHGDTFDVTIYTGGKDTGIVKIYQLSGNENDEINLHRYK---------TIYDSGLKHNYGRFV 88 (120)
T ss_dssp EETTCEEEEEEECCSSBCCEEEEEEECSCTTCSCCEEEEE---------EEECCCCCTTEEEEE
T ss_pred cccCCEEEEEEEcCCCccceEEEEEEccCCCCCcceEEEE---------EeccCCCcCCeeEEE
Confidence 348999888776543 2458899995 568877643 458888898977663
No 10
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=20.12 E-value=2.5e+02 Score=26.33 Aligned_cols=88 Identities=23% Similarity=0.325 Sum_probs=44.6
Q ss_pred ceEEEeecccCCCCCeEEEEeCCCCeEEEEEEcCCCCcCCCc-------EEeecCCCCC----C---------CCCCCCc
Q 040986 397 RYVFVGVGKEIPKMQGVVKIDLEKEIEVSRRFYGPGCFGGEP-------LFVPRNGDHV----D---------AADEDDG 456 (514)
Q Consensus 397 ry~Y~~~~~~~~~~~~l~k~D~~~g~~~~~~~~~~~~~~~EP-------vFVPrp~~~~----~---------~~~EDDG 456 (514)
...|-..... .-++|.++|+++|+..+....+...| +|- +|+-.-.+.. + -.-..+|
T Consensus 31 ~~LyestG~~--g~S~v~~vD~~tgkv~~~~~l~~~~f-geGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~G 107 (243)
T 3mbr_X 31 GHLYESTGET--GRSSVRKVDLETGRILQRAEVPPPYF-GAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEG 107 (243)
T ss_dssp TEEEEEECCT--TSCEEEEEETTTCCEEEEEECCTTCC-EEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECSSCC
T ss_pred CEEEEECCCC--CCceEEEEECCCCCEEEEEeCCCCcc-eeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCc
Confidence 3456544331 13678899998888555555554433 232 2222100000 0 0112355
Q ss_pred EEEEEEEeCC-----CCeeeEEEEeCCCCCCceeEEEEcC
Q 040986 457 FVVTYIHDEN-----YGESKFLVMDAKSPNLDIVAAVKLP 491 (514)
Q Consensus 457 ~ll~~v~d~~-----~~~S~l~VlDA~~~~~gpVAr~~LP 491 (514)
|-|+ +|.. ++.+.|.++|++++ .++.++.+-
T Consensus 108 wglt--~dg~~L~vSdgs~~l~~iDp~t~--~~~~~I~V~ 143 (243)
T 3mbr_X 108 WALT--SDDSHLYMSDGTAVIRKLDPDTL--QQVGSIKVT 143 (243)
T ss_dssp CEEE--ECSSCEEEECSSSEEEEECTTTC--CEEEEEECE
T ss_pred eEEe--eCCCEEEEECCCCeEEEEeCCCC--eEEEEEEEc
Confidence 5554 2321 23557888888875 677777775
Done!