Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>040989
MARATPSGTVSVSVTVSNSPLPLSHPPLVHHSAITATTTSPSLVEPHRGILHSALKTDRP
RKMSQVRVLVMYDGKWFCSPSGYYLYSGGQTKGIIVSDDITYKELVDRLYGIVKVDTNEY
VITMKSLYKANIPTMPVEIVDDDDVRFFIQENAAHPTELRSPICITIERKGSQCQETEGY
HAALDHQTPAASRSESNQISVVVPGMQATEVEEQNLNAFNGDPVAANFGTEAPLGCGDGI
LAANIEVSEQQDDIQRLDLSQDDCGDKLPIRRSNTRSAAINPFHSYEDIVCGKTFTSKKD
LIKKLKLGAAKKNFAFKVSKSTKDRFEVVCADTNCKWRLRATKTAEDEYFEIRRFSNIHI
CTQPPAKNRKKQTALQRPDGERGIRNEKPNSSYGLVKQKWNSFDSSVQLNPTVELRNGTD
VIWQIPDSPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITIS
SAGRCWTLGEERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLRFSSIALM
IAEGLFDQMDIPEDYPPTLFVHMPKDSYRQRKIGEFLVVLRNKGIDVAEIECMEFPLSRN
FFTDRIPGLEQANSTKLFELFQEKGFIDENGYMRSDGRRTRWKEALRESNAIFLNKNLVH
HVQEELNLAFAYHEMTSLPSEQIFKWFLPIGSLDLPSEAK

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  040989
        (700 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2099059 - symbol:AT3G58800 "AT3G58800" species...   983  5.0e-99   1


>TAIR|locus:2099059 [details] [associations]
            symbol:AT3G58800 "AT3G58800" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 EMBL:AL353032 EMBL:AK117893
            IPI:IPI00529874 PIR:T49163 RefSeq:NP_191439.1
            ProteinModelPortal:Q9LXS2 EnsemblPlants:AT3G58800.1 GeneID:825049
            KEGG:ath:AT3G58800 TAIR:At3g58800 InParanoid:Q9LXS2 OMA:FVHMPKD
            PhylomeDB:Q9LXS2 ProtClustDB:CLSN2684750 Genevestigator:Q9LXS2
            Uniprot:Q9LXS2
        Length = 344

 Score = 983 (351.1 bits), Expect = 5.0e-99, P = 5.0e-99
 Identities = 183/293 (62%), Positives = 231/293 (78%)

Query:   395 LVKQKWNSFDSSVQLNPTVELRNGTDVIWQIPDSPKAVLFLAHGCNGRAVHFWDRSPNCP 454
             L KQ  N+    +Q  PT+E++N T +IW IP+SPKAVLF+AHGC+ +A  FWD+S +CP
Sbjct:    48 LPKQISNNVKPELQSQPTLEIQNETQLIWTIPNSPKAVLFIAHGCHRKASDFWDKSSDCP 107

Query:   455 NCIGLPEERLLVLHALSRGFAIITISSAGRCWTLGEERLVVREIIRWWVERHKLEKLPLV 514
              C GLPEER+L+  AL+R FA++T+SS G CWT G+E+ +V  II+ WVE+HKLE+LPLV
Sbjct:   108 QCTGLPEERILMRFALARKFAVLTVSSTGTCWTFGKEKTIVGSIIKSWVEKHKLERLPLV 167

Query:   515 ALGASSGGYFVSALAKGLRFSSIALMIAEGLFDQMDIPEDYPPTLFVHMPKDSYRQRKIG 574
             ALGASSGGYFVSALA  ++FSSI LMIAEG+FDQ+ I + YPPTLFVHMPKD YRQ+KI 
Sbjct:   168 ALGASSGGYFVSALATEMQFSSIVLMIAEGVFDQISISKQYPPTLFVHMPKDVYRQQKIR 227

Query:   575 EFLVVLRNKGIDVAEIECMEFPLSRNFFTDRIPGLEQANSTKLFELFQEKGFIDENGYMR 634
             EFL  LR +GID AEIEC++ P+S +F  DRIPGL+   S KLF+LF++KGF+DE GYM+
Sbjct:   228 EFLEGLRMEGIDAAEIECLDLPISPDFLADRIPGLDSDVSAKLFKLFRDKGFVDEKGYMK 287

Query:   635 SDGRRTRWKEALRESNAIFLNKNLVHHVQEELNLAFAYHEMTSLPSEQIFKWF 687
              DGRRT WK+AL     I L ++L+  V+EELNLA+AYHEMTSL S+QIF WF
Sbjct:   288 RDGRRTPWKQAL-SGYKISLEQSLITPVEEELNLAYAYHEMTSLQSDQIFSWF 339


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.135   0.408    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      700       649   0.00095  120 3  11 22  0.39    34
                                                     36  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  623 (66 KB)
  Total size of DFA:  371 KB (2183 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  52.79u 0.11s 52.90t   Elapsed:  00:00:06
  Total cpu time:  52.79u 0.11s 52.90t   Elapsed:  00:00:06
  Start:  Tue May 21 01:36:43 2013   End:  Tue May 21 01:36:49 2013

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