Query 040989
Match_columns 700
No_of_seqs 334 out of 635
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 02:44:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040989.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040989hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF03108 DBD_Tnp_Mut: MuDR fam 99.8 8.2E-19 1.8E-23 146.4 8.3 66 287-352 2-67 (67)
2 KOG1455 Lysophospholipase [Lip 99.5 1.5E-13 3.2E-18 143.7 14.0 113 411-538 30-158 (313)
3 PF10503 Esterase_phd: Esteras 99.5 2.1E-13 4.5E-18 139.5 14.0 188 420-635 2-210 (220)
4 TIGR01840 esterase_phb esteras 99.5 2.2E-13 4.8E-18 137.8 13.5 150 422-586 2-201 (212)
5 PLN02298 hydrolase, alpha/beta 99.4 9.1E-12 2E-16 133.8 20.5 195 414-634 38-294 (330)
6 PRK13604 luxD acyl transferase 99.4 7.4E-12 1.6E-16 133.5 18.0 189 412-633 13-244 (307)
7 PLN02385 hydrolase; alpha/beta 99.4 1.6E-11 3.4E-16 133.4 18.4 194 415-634 68-322 (349)
8 PHA02857 monoglyceride lipase; 99.3 5.7E-11 1.2E-15 123.7 19.8 190 415-635 7-252 (276)
9 cd06410 PB1_UP2 Uncharacterize 99.3 4.1E-12 8.9E-17 113.5 8.0 82 69-153 1-83 (97)
10 PRK10566 esterase; Provisional 99.3 6.4E-11 1.4E-15 121.5 18.1 181 417-626 10-217 (249)
11 COG3509 LpqC Poly(3-hydroxybut 99.3 2.3E-11 5.1E-16 126.9 12.8 164 419-622 47-235 (312)
12 COG2267 PldB Lysophospholipase 99.3 1.4E-11 3.1E-16 131.7 10.3 107 414-538 15-136 (298)
13 PF12695 Abhydrolase_5: Alpha/ 99.2 1.1E-10 2.4E-15 108.9 13.2 137 432-592 1-139 (145)
14 PRK11460 putative hydrolase; P 99.2 6.7E-10 1.5E-14 114.5 18.7 167 428-622 14-206 (232)
15 COG1506 DAP2 Dipeptidyl aminop 99.2 5.1E-10 1.1E-14 131.1 18.0 110 414-537 371-500 (620)
16 PRK10749 lysophospholipase L2; 99.2 7.5E-10 1.6E-14 119.6 17.1 108 413-538 35-160 (330)
17 TIGR01607 PST-A Plasmodium sub 99.2 1.3E-10 2.8E-15 126.0 11.0 117 415-532 4-163 (332)
18 TIGR02821 fghA_ester_D S-formy 99.1 1.6E-09 3.6E-14 114.1 17.6 159 420-593 28-251 (275)
19 PRK10162 acetyl esterase; Prov 99.1 2.3E-09 5E-14 115.6 18.5 161 419-593 69-285 (318)
20 PRK05077 frsA fermentation/res 99.1 8.4E-10 1.8E-14 123.3 14.2 179 416-622 176-382 (414)
21 PLN02652 hydrolase; alpha/beta 99.1 3.7E-09 8E-14 117.5 18.3 187 416-634 118-367 (395)
22 PLN02442 S-formylglutathione h 99.0 1.2E-08 2.6E-13 108.2 15.8 159 419-592 32-256 (283)
23 PF07859 Abhydrolase_3: alpha/ 98.9 1.3E-08 2.7E-13 101.9 12.9 146 433-593 1-203 (211)
24 PF02230 Abhydrolase_2: Phosph 98.9 2.3E-08 5.1E-13 101.5 13.9 148 426-592 9-193 (216)
25 KOG4391 Predicted alpha/beta h 98.9 1.3E-08 2.8E-13 102.1 11.5 207 414-651 60-284 (300)
26 KOG1552 Predicted alpha/beta h 98.9 1.3E-08 2.9E-13 105.0 11.8 167 426-632 56-232 (258)
27 COG1647 Esterase/lipase [Gener 98.9 3.2E-08 6.9E-13 99.9 13.9 176 431-638 16-228 (243)
28 TIGR03056 bchO_mg_che_rel puta 98.9 1.3E-07 2.8E-12 97.2 18.5 109 411-538 8-124 (278)
29 COG0657 Aes Esterase/lipase [L 98.9 9.8E-08 2.1E-12 102.2 18.1 162 419-594 64-283 (312)
30 TIGR03343 biphenyl_bphD 2-hydr 98.8 1.6E-07 3.5E-12 97.5 18.9 105 418-538 19-130 (282)
31 PF00326 Peptidase_S9: Prolyl 98.8 7E-09 1.5E-13 104.5 8.1 148 465-626 6-175 (213)
32 TIGR03101 hydr2_PEP hydrolase, 98.8 3.5E-08 7.5E-13 104.1 13.1 107 417-538 9-128 (266)
33 PF01738 DLH: Dienelactone hyd 98.8 1.3E-07 2.9E-12 95.7 16.9 182 421-620 3-209 (218)
34 PRK10115 protease 2; Provision 98.8 1.5E-07 3.2E-12 111.7 18.7 186 414-626 422-637 (686)
35 TIGR02240 PHA_depoly_arom poly 98.8 1.2E-07 2.6E-12 99.1 15.9 110 411-539 4-121 (276)
36 COG0400 Predicted esterase [Ge 98.8 1.9E-07 4E-12 95.0 16.2 166 426-621 13-202 (207)
37 PRK00870 haloalkane dehalogena 98.7 1.1E-07 2.3E-12 101.0 13.7 113 408-538 18-144 (302)
38 PRK10985 putative hydrolase; P 98.7 1.1E-07 2.3E-12 102.7 13.7 103 414-532 37-152 (324)
39 PLN02211 methyl indole-3-aceta 98.7 6.3E-08 1.4E-12 102.1 11.3 105 417-538 5-116 (273)
40 PLN02824 hydrolase, alpha/beta 98.7 1.9E-07 4E-12 98.5 14.2 106 414-538 13-131 (294)
41 TIGR01250 pro_imino_pep_2 prol 98.7 1.2E-07 2.7E-12 96.6 12.3 107 415-538 8-125 (288)
42 PLN00021 chlorophyllase 98.7 1.6E-07 3.5E-12 101.3 12.7 100 417-532 37-147 (313)
43 PLN02511 hydrolase 98.7 2E-07 4.4E-12 103.3 13.6 109 414-538 77-204 (388)
44 COG0412 Dienelactone hydrolase 98.7 1.3E-06 2.9E-11 90.6 18.7 153 422-592 17-196 (236)
45 TIGR01738 bioH putative pimelo 98.7 4.3E-07 9.3E-12 90.2 14.3 89 430-538 4-94 (245)
46 PLN03087 BODYGUARD 1 domain co 98.6 1.4E-06 3.1E-11 99.0 19.7 109 416-539 183-304 (481)
47 PLN02965 Probable pheophorbida 98.6 2.1E-07 4.5E-12 96.3 11.2 93 429-538 2-101 (255)
48 PF12697 Abhydrolase_6: Alpha/ 98.6 2.3E-07 5E-12 90.5 11.0 87 433-538 1-95 (228)
49 PRK11071 esterase YqiA; Provis 98.6 2.5E-07 5.3E-12 92.7 11.0 82 431-535 2-85 (190)
50 TIGR03100 hydr1_PEP hydrolase, 98.6 5.7E-07 1.2E-11 94.8 13.6 109 416-538 9-128 (274)
51 TIGR03611 RutD pyrimidine util 98.6 2.1E-07 4.6E-12 93.7 9.8 92 428-538 11-109 (257)
52 COG2945 Predicted hydrolase of 98.6 9.1E-07 2E-11 87.8 13.2 169 420-609 17-196 (210)
53 PRK14875 acetoin dehydrogenase 98.5 1.6E-06 3.6E-11 93.9 16.4 105 415-538 115-226 (371)
54 TIGR01392 homoserO_Ac_trn homo 98.5 2.3E-07 5E-12 101.0 9.7 112 414-538 11-156 (351)
55 TIGR00976 /NonD putative hydro 98.5 5.4E-07 1.2E-11 104.4 12.7 106 415-533 3-119 (550)
56 PRK10673 acyl-CoA esterase; Pr 98.5 6.7E-07 1.5E-11 91.3 11.1 101 420-539 4-111 (255)
57 TIGR03695 menH_SHCHC 2-succiny 98.5 4.7E-07 1E-11 89.6 9.6 90 430-538 1-99 (251)
58 PRK06489 hypothetical protein; 98.5 9E-07 1.9E-11 96.8 12.2 110 414-539 45-184 (360)
59 PRK03592 haloalkane dehalogena 98.5 1.3E-06 2.8E-11 92.1 13.0 105 414-538 12-122 (295)
60 TIGR02427 protocat_pcaD 3-oxoa 98.4 8.3E-07 1.8E-11 88.3 10.0 91 429-538 12-108 (251)
61 PRK03204 haloalkane dehalogena 98.4 2.7E-06 5.9E-11 90.0 12.8 105 414-538 19-130 (286)
62 PRK10349 carboxylesterase BioH 98.4 8E-07 1.7E-11 91.5 8.3 88 431-538 14-103 (256)
63 TIGR01249 pro_imino_pep_1 prol 98.4 2.8E-06 6.1E-11 90.6 12.4 105 415-538 11-124 (306)
64 PRK11126 2-succinyl-6-hydroxy- 98.4 1.3E-06 2.9E-11 88.6 9.3 89 430-538 2-96 (242)
65 cd00707 Pancreat_lipase_like P 98.4 1.7E-06 3.8E-11 91.6 10.4 97 428-538 34-141 (275)
66 PLN02894 hydrolase, alpha/beta 98.4 3E-06 6.4E-11 94.6 12.6 92 428-538 103-205 (402)
67 COG4099 Predicted peptidase [G 98.4 3.1E-06 6.8E-11 88.7 11.6 161 417-625 170-345 (387)
68 PLN02872 triacylglycerol lipas 98.3 1.6E-06 3.4E-11 96.6 9.8 105 413-530 49-179 (395)
69 PRK08775 homoserine O-acetyltr 98.3 1.9E-06 4.1E-11 93.6 10.1 107 415-538 42-167 (343)
70 PLN02578 hydrolase 98.3 4.5E-06 9.8E-11 91.2 12.8 105 415-539 72-182 (354)
71 PLN02679 hydrolase, alpha/beta 98.3 3.6E-06 7.9E-11 92.3 11.6 105 416-539 68-186 (360)
72 PF12146 Hydrolase_4: Putative 98.3 9.5E-07 2.1E-11 76.3 4.8 55 418-488 1-58 (79)
73 COG3571 Predicted hydrolase of 98.2 1.2E-05 2.6E-10 77.7 12.0 133 422-573 5-161 (213)
74 KOG2564 Predicted acetyltransf 98.2 5.7E-06 1.2E-10 86.3 10.1 107 420-545 63-184 (343)
75 COG0429 Predicted hydrolase of 98.2 9.6E-06 2.1E-10 86.8 11.4 102 413-530 54-167 (345)
76 KOG1515 Arylacetamide deacetyl 98.2 0.00012 2.6E-09 79.8 20.1 192 413-622 68-329 (336)
77 PRK07581 hypothetical protein; 98.2 4.2E-06 9E-11 90.5 8.8 111 414-539 21-154 (339)
78 PRK05855 short chain dehydroge 98.2 7.3E-06 1.6E-10 94.1 11.0 100 414-531 8-114 (582)
79 TIGR01836 PHA_synth_III_C poly 98.2 1.2E-05 2.6E-10 87.6 11.7 111 415-538 44-165 (350)
80 PRK00175 metX homoserine O-ace 98.2 6.9E-06 1.5E-10 90.7 9.7 122 414-539 28-177 (379)
81 PLN03084 alpha/beta hydrolase 98.1 2E-05 4.4E-10 87.4 11.9 105 415-538 111-226 (383)
82 PF06500 DUF1100: Alpha/beta h 98.1 5.4E-06 1.2E-10 91.7 6.4 108 416-538 172-290 (411)
83 PF12740 Chlorophyllase2: Chlo 98.0 2.1E-05 4.5E-10 82.4 9.7 99 424-538 9-125 (259)
84 KOG1838 Alpha/beta hydrolase [ 98.0 3.5E-05 7.6E-10 85.0 11.5 102 414-531 99-218 (409)
85 TIGR03230 lipo_lipase lipoprot 98.0 3.5E-05 7.6E-10 86.6 11.6 95 430-538 41-148 (442)
86 KOG1454 Predicted hydrolase/ac 98.0 0.00011 2.5E-09 79.8 15.2 93 429-538 57-157 (326)
87 TIGR03502 lipase_Pla1_cef extr 98.0 1.9E-05 4.1E-10 94.0 9.7 87 429-531 448-575 (792)
88 PF02129 Peptidase_S15: X-Pro 98.0 3.2E-05 6.8E-10 81.5 9.7 115 417-538 1-130 (272)
89 PF05448 AXE1: Acetyl xylan es 97.9 2E-05 4.4E-10 85.4 8.0 178 414-622 62-289 (320)
90 KOG2100 Dipeptidyl aminopeptid 97.9 0.00013 2.7E-09 87.7 14.7 107 414-533 503-630 (755)
91 KOG2112 Lysophospholipase [Lip 97.9 9E-05 2E-09 74.7 10.8 149 430-590 3-180 (206)
92 KOG4409 Predicted hydrolase/ac 97.9 2.6E-05 5.7E-10 83.9 7.4 91 429-538 89-189 (365)
93 PF06342 DUF1057: Alpha/beta h 97.9 0.00015 3.2E-09 76.4 12.4 175 420-623 22-240 (297)
94 PRK10439 enterobactin/ferric e 97.8 0.00054 1.2E-08 76.9 17.4 159 419-594 194-388 (411)
95 PF06821 Ser_hydrolase: Serine 97.8 0.00026 5.7E-09 70.0 12.0 160 433-646 1-166 (171)
96 PF07224 Chlorophyllase: Chlor 97.8 6.9E-05 1.5E-09 77.9 7.8 100 424-539 38-152 (307)
97 COG4757 Predicted alpha/beta h 97.7 0.00025 5.4E-09 72.6 11.3 147 463-622 47-243 (281)
98 PLN02980 2-oxoglutarate decarb 97.7 0.00012 2.6E-09 94.8 10.1 91 429-538 1370-1474(1655)
99 COG0596 MhpC Predicted hydrola 97.7 0.00024 5.2E-09 69.3 9.9 100 418-533 9-110 (282)
100 PRK05371 x-prolyl-dipeptidyl a 97.7 0.00059 1.3E-08 82.2 14.9 69 464-532 270-359 (767)
101 PF12715 Abhydrolase_7: Abhydr 97.7 5.8E-05 1.3E-09 82.6 5.7 114 422-536 104-252 (390)
102 TIGR01838 PHA_synth_I poly(R)- 97.6 0.00048 1.1E-08 79.5 12.6 97 416-525 171-276 (532)
103 PF00756 Esterase: Putative es 97.5 0.00024 5.3E-09 73.1 8.3 111 419-545 8-149 (251)
104 cd00312 Esterase_lipase Estera 97.4 0.00069 1.5E-08 77.2 11.2 103 415-531 75-196 (493)
105 PF09752 DUF2048: Uncharacteri 97.4 0.0014 3.1E-08 71.2 12.1 89 429-534 91-198 (348)
106 PF00561 Abhydrolase_1: alpha/ 97.4 0.00055 1.2E-08 67.8 8.1 63 474-538 1-73 (230)
107 PF09322 DUF1979: Domain of un 97.4 0.00018 4E-09 56.3 3.4 48 63-117 1-58 (58)
108 PF08731 AFT: Transcription fa 97.3 0.0013 2.7E-08 60.1 9.0 69 295-363 1-111 (111)
109 PF00975 Thioesterase: Thioest 97.3 0.00068 1.5E-08 68.6 7.9 84 432-533 2-88 (229)
110 KOG4178 Soluble epoxide hydrol 97.3 0.0012 2.6E-08 70.9 9.6 92 429-538 43-142 (322)
111 COG3458 Acetyl esterase (deace 97.3 0.00076 1.7E-08 70.5 7.7 102 413-531 61-196 (321)
112 KOG3101 Esterase D [General fu 97.2 0.0003 6.6E-09 70.9 4.5 100 419-531 28-161 (283)
113 PF00151 Lipase: Lipase; Inte 97.2 0.00056 1.2E-08 74.6 6.4 92 429-534 70-173 (331)
114 PRK07868 acyl-CoA synthetase; 97.2 0.0024 5.2E-08 79.4 12.6 112 414-539 44-172 (994)
115 PF07819 PGAP1: PGAP1-like pro 97.2 0.003 6.4E-08 65.3 11.0 93 430-532 4-106 (225)
116 PF05728 UPF0227: Uncharacteri 97.1 0.00093 2E-08 67.1 6.6 84 433-537 2-85 (187)
117 COG4188 Predicted dienelactone 97.1 0.0013 2.9E-08 71.7 8.1 87 429-531 70-179 (365)
118 PRK06765 homoserine O-acetyltr 97.1 0.0029 6.3E-08 70.6 10.9 111 415-539 37-191 (389)
119 PF01674 Lipase_2: Lipase (cla 97.1 0.0015 3.2E-08 67.2 7.6 80 433-530 4-94 (219)
120 smart00666 PB1 PB1 domain. Pho 97.0 0.0021 4.6E-08 55.2 7.0 64 85-154 7-70 (81)
121 PF10532 Plant_all_beta: Plant 97.0 0.00063 1.4E-08 62.0 3.7 56 111-169 1-56 (114)
122 KOG2281 Dipeptidyl aminopeptid 96.9 0.0045 9.7E-08 71.1 10.5 111 414-533 619-749 (867)
123 PF03959 FSH1: Serine hydrolas 96.9 0.0021 4.6E-08 65.4 7.4 87 429-531 3-122 (212)
124 COG2272 PnbA Carboxylesterase 96.9 0.015 3.4E-07 65.6 14.3 103 415-530 76-199 (491)
125 PF07082 DUF1350: Protein of u 96.9 0.0035 7.7E-08 65.2 8.6 96 425-533 12-112 (250)
126 PF10230 DUF2305: Uncharacteri 96.9 0.0023 5E-08 67.7 7.4 89 429-533 1-106 (266)
127 PF03403 PAF-AH_p_II: Platelet 96.9 0.0032 6.9E-08 70.0 8.8 40 429-484 99-138 (379)
128 TIGR01839 PHA_synth_II poly(R) 96.9 0.0058 1.3E-07 70.6 11.0 112 416-540 198-324 (560)
129 PF00135 COesterase: Carboxyle 96.8 0.0014 3E-08 74.8 5.7 103 417-531 107-228 (535)
130 COG3208 GrsT Predicted thioest 96.7 0.0035 7.5E-08 65.0 6.6 86 428-532 5-95 (244)
131 COG2936 Predicted acyl esteras 96.6 0.007 1.5E-07 69.7 9.3 112 412-534 23-147 (563)
132 PTZ00472 serine carboxypeptida 96.6 0.02 4.4E-07 65.3 13.0 58 474-531 122-191 (462)
133 KOG4627 Kynurenine formamidase 96.6 0.013 2.7E-07 59.4 9.4 94 425-532 62-157 (270)
134 PF03583 LIP: Secretory lipase 96.4 0.0098 2.1E-07 63.7 8.4 68 462-529 15-89 (290)
135 KOG2551 Phospholipase/carboxyh 96.4 0.035 7.5E-07 56.9 11.3 175 429-648 4-219 (230)
136 KOG3043 Predicted hydrolase re 96.3 0.094 2E-06 53.9 14.3 151 413-583 22-193 (242)
137 cd05992 PB1 The PB1 domain is 96.3 0.016 3.5E-07 49.5 7.6 63 85-153 6-69 (81)
138 KOG4667 Predicted esterase [Li 96.2 0.013 2.9E-07 59.7 7.4 88 429-533 32-127 (269)
139 KOG2382 Predicted alpha/beta h 96.2 0.0067 1.5E-07 65.3 5.6 84 429-531 51-142 (315)
140 TIGR03712 acc_sec_asp2 accesso 96.1 0.047 1E-06 61.7 11.9 154 417-588 274-477 (511)
141 PF10340 DUF2424: Protein of u 96.1 0.021 4.6E-07 63.1 9.1 89 430-531 122-215 (374)
142 KOG3847 Phospholipase A2 (plat 96.1 0.018 3.9E-07 61.5 8.1 42 430-487 118-161 (399)
143 COG3545 Predicted esterase of 96.1 0.052 1.1E-06 53.8 10.6 107 510-644 58-167 (181)
144 KOG1553 Predicted alpha/beta h 96.0 0.0096 2.1E-07 64.1 5.7 76 469-547 264-345 (517)
145 PF12048 DUF3530: Protein of u 96.0 0.26 5.6E-06 53.5 16.8 109 415-538 68-223 (310)
146 COG3319 Thioesterase domains o 96.0 0.013 2.7E-07 61.9 6.3 87 431-536 1-90 (257)
147 COG1505 Serine proteases of th 95.8 0.026 5.6E-07 64.9 8.4 165 414-592 400-618 (648)
148 COG3150 Predicted esterase [Ge 95.7 0.1 2.2E-06 51.5 10.7 175 433-646 2-186 (191)
149 PLN02733 phosphatidylcholine-s 95.7 0.021 4.6E-07 64.7 7.1 67 464-533 112-184 (440)
150 PF05677 DUF818: Chlamydia CHL 95.7 0.061 1.3E-06 58.5 10.1 111 417-536 120-240 (365)
151 COG1770 PtrB Protease II [Amin 95.6 0.08 1.7E-06 61.7 11.1 150 428-591 446-649 (682)
152 KOG2624 Triglyceride lipase-ch 95.6 0.033 7.2E-07 62.3 7.9 108 413-532 53-182 (403)
153 PRK04940 hypothetical protein; 95.5 0.06 1.3E-06 53.8 8.6 28 511-538 60-87 (180)
154 PF06057 VirJ: Bacterial virul 95.4 0.043 9.3E-07 55.2 7.0 69 463-533 19-90 (192)
155 PF00564 PB1: PB1 domain; Int 95.3 0.054 1.2E-06 46.6 6.8 76 86-169 8-83 (84)
156 cd06406 PB1_P67 A PB1 domain i 95.3 0.068 1.5E-06 46.4 7.1 62 85-153 8-69 (80)
157 PF03101 FAR1: FAR1 DNA-bindin 95.3 0.059 1.3E-06 47.1 7.0 58 305-363 3-89 (91)
158 COG2382 Fes Enterochelin ester 94.9 0.34 7.4E-06 51.9 12.4 102 417-533 80-199 (299)
159 PF06028 DUF915: Alpha/beta hy 94.6 0.1 2.2E-06 55.0 7.8 168 431-622 12-217 (255)
160 COG0627 Predicted esterase [Ge 94.6 0.066 1.4E-06 58.2 6.4 93 428-533 52-174 (316)
161 KOG4388 Hormone-sensitive lipa 94.5 0.048 1E-06 62.3 5.2 98 422-531 387-489 (880)
162 PF01764 Lipase_3: Lipase (cla 94.5 0.051 1.1E-06 50.7 4.7 38 493-532 48-85 (140)
163 PF08538 DUF1749: Protein of u 94.4 0.3 6.5E-06 52.7 10.7 91 429-532 32-129 (303)
164 PF11144 DUF2920: Protein of u 94.3 0.49 1.1E-05 52.8 12.4 40 494-533 165-206 (403)
165 KOG3253 Predicted alpha/beta h 94.0 0.54 1.2E-05 54.4 12.1 160 507-686 246-427 (784)
166 cd00741 Lipase Lipase. Lipase 93.8 0.092 2E-06 50.3 5.0 38 494-533 13-50 (153)
167 PF02273 Acyl_transf_2: Acyl t 93.6 0.62 1.3E-05 48.7 10.7 177 414-622 8-222 (294)
168 cd00519 Lipase_3 Lipase (class 93.6 0.094 2E-06 53.7 4.9 38 493-532 112-149 (229)
169 cd06408 PB1_NoxR The PB1 domai 93.5 0.16 3.6E-06 44.7 5.6 59 86-152 9-67 (86)
170 PF11288 DUF3089: Protein of u 93.4 0.12 2.5E-06 52.9 5.2 38 493-531 78-115 (207)
171 KOG1516 Carboxylesterase and r 93.4 0.27 6E-06 56.9 8.9 105 416-531 94-215 (545)
172 PF05990 DUF900: Alpha/beta hy 93.1 0.3 6.6E-06 50.7 7.9 87 428-531 16-113 (233)
173 KOG4540 Putative lipase essent 93.0 0.15 3.3E-06 54.0 5.3 44 493-538 260-303 (425)
174 COG5153 CVT17 Putative lipase 93.0 0.15 3.3E-06 54.0 5.3 44 493-538 260-303 (425)
175 PRK10252 entF enterobactin syn 93.0 0.2 4.4E-06 63.8 7.6 85 430-532 1068-1154(1296)
176 PF05057 DUF676: Putative seri 92.8 0.19 4.2E-06 51.4 5.9 20 510-529 77-96 (217)
177 cd06407 PB1_NLP A PB1 domain i 92.8 0.39 8.5E-06 41.9 6.8 63 88-155 8-71 (82)
178 COG4782 Uncharacterized protei 92.7 0.4 8.6E-06 52.6 8.1 88 429-533 115-213 (377)
179 PF00450 Peptidase_S10: Serine 92.5 0.54 1.2E-05 52.0 9.4 113 418-531 23-156 (415)
180 KOG3967 Uncharacterized conser 92.5 0.7 1.5E-05 47.3 9.0 97 428-533 99-212 (297)
181 PF05577 Peptidase_S28: Serine 92.4 0.66 1.4E-05 52.3 10.0 91 431-533 29-135 (434)
182 COG2021 MET2 Homoserine acetyl 92.3 0.27 5.8E-06 54.1 6.4 106 415-533 32-169 (368)
183 PLN02454 triacylglycerol lipas 91.9 0.23 4.9E-06 55.7 5.4 40 493-532 210-249 (414)
184 COG1075 LipA Predicted acetylt 91.7 0.3 6.4E-06 53.6 5.9 86 430-533 59-149 (336)
185 PLN03016 sinapoylglucose-malat 91.6 1.2 2.7E-05 50.5 10.9 58 474-531 116-185 (433)
186 PLN02571 triacylglycerol lipas 91.4 0.27 5.8E-06 55.2 5.2 40 493-532 208-247 (413)
187 KOG2183 Prolylcarboxypeptidase 90.9 0.89 1.9E-05 50.7 8.5 92 430-533 80-189 (492)
188 PLN02408 phospholipase A1 90.9 0.31 6.8E-06 53.9 5.1 40 493-532 182-221 (365)
189 PF07519 Tannase: Tannase and 90.6 1.9 4E-05 49.7 11.2 73 466-538 52-144 (474)
190 PLN02209 serine carboxypeptida 90.4 0.52 1.1E-05 53.6 6.5 60 472-531 116-187 (437)
191 KOG3724 Negative regulator of 90.3 0.83 1.8E-05 54.4 8.0 42 490-531 154-202 (973)
192 PLN02162 triacylglycerol lipas 89.9 0.42 9E-06 54.3 5.1 36 494-531 263-298 (475)
193 PLN02934 triacylglycerol lipas 89.8 0.41 8.9E-06 54.8 4.9 37 493-531 305-341 (515)
194 KOG2931 Differentiation-relate 89.4 3 6.4E-05 44.8 10.6 106 420-538 35-151 (326)
195 PLN03097 FHY3 Protein FAR-RED 89.4 1.1 2.4E-05 54.7 8.5 77 287-364 72-189 (846)
196 PLN00413 triacylglycerol lipas 89.4 0.47 1E-05 54.0 5.0 36 494-531 269-304 (479)
197 PF08840 BAAT_C: BAAT / Acyl-C 89.3 0.47 1E-05 48.5 4.6 46 493-538 4-50 (213)
198 PLN02324 triacylglycerol lipas 89.3 0.51 1.1E-05 53.0 5.2 40 493-532 197-236 (415)
199 cd06396 PB1_NBR1 The PB1 domai 88.7 1.2 2.6E-05 38.9 5.9 62 88-156 8-71 (81)
200 PLN02802 triacylglycerol lipas 88.5 0.59 1.3E-05 53.5 5.1 40 493-532 312-351 (509)
201 PF02089 Palm_thioest: Palmito 88.4 2.1 4.6E-05 45.8 8.9 101 426-542 2-111 (279)
202 KOG3975 Uncharacterized conser 87.6 2.4 5.3E-05 44.5 8.3 93 426-531 25-130 (301)
203 COG4814 Uncharacterized protei 87.3 1.8 4E-05 45.5 7.3 95 433-547 48-177 (288)
204 smart00824 PKS_TE Thioesterase 87.3 2.7 5.8E-05 40.8 8.3 64 467-532 19-85 (212)
205 KOG4569 Predicted lipase [Lipi 87.2 0.76 1.7E-05 50.4 4.9 38 493-532 155-192 (336)
206 PLN02753 triacylglycerol lipas 87.0 0.84 1.8E-05 52.5 5.1 39 493-531 291-332 (531)
207 KOG2237 Predicted serine prote 86.9 1.1 2.3E-05 52.5 5.8 96 428-537 468-577 (712)
208 PLN02213 sinapoylglucose-malat 86.8 1.7 3.6E-05 47.3 7.2 93 475-569 3-119 (319)
209 PLN02310 triacylglycerol lipas 85.9 1 2.2E-05 50.5 5.0 39 494-532 190-230 (405)
210 PLN03037 lipase class 3 family 85.3 1.1 2.4E-05 51.5 5.0 37 495-531 300-338 (525)
211 PLN02761 lipase class 3 family 85.0 1.2 2.6E-05 51.2 5.1 39 493-531 272-314 (527)
212 PLN02847 triacylglycerol lipas 84.9 1.2 2.6E-05 52.0 5.0 36 495-532 237-272 (633)
213 COG4947 Uncharacterized protei 84.2 3.9 8.5E-05 40.8 7.5 82 464-549 49-139 (227)
214 PLN02719 triacylglycerol lipas 84.2 1.4 3E-05 50.7 5.1 39 493-531 277-318 (518)
215 cd06401 PB1_TFG The PB1 domain 83.7 3.1 6.6E-05 36.3 5.8 62 88-152 8-71 (81)
216 PF11187 DUF2974: Protein of u 83.4 1.7 3.6E-05 45.1 5.0 37 493-532 69-105 (224)
217 PF02450 LCAT: Lecithin:choles 82.5 2.2 4.7E-05 47.8 5.8 67 463-532 68-140 (389)
218 cd06411 PB1_p51 The PB1 domain 81.3 3.5 7.6E-05 35.7 5.3 59 92-153 9-67 (78)
219 KOG1282 Serine carboxypeptidas 80.4 6.8 0.00015 44.8 8.8 113 416-531 54-188 (454)
220 COG3243 PhaC Poly(3-hydroxyalk 80.2 8.4 0.00018 43.4 9.1 90 431-533 108-203 (445)
221 PF05705 DUF829: Eukaryotic pr 79.2 16 0.00035 37.5 10.5 63 465-528 19-84 (240)
222 KOG2984 Predicted hydrolase [G 78.1 3.4 7.3E-05 42.3 4.8 102 413-533 25-136 (277)
223 PLN02517 phosphatidylcholine-s 77.4 3.9 8.4E-05 48.0 5.7 63 464-530 160-232 (642)
224 cd06398 PB1_Joka2 The PB1 doma 77.1 15 0.00033 32.7 8.2 73 89-167 9-86 (91)
225 PF03106 WRKY: WRKY DNA -bindi 76.8 7.4 0.00016 32.0 5.7 49 314-362 10-59 (60)
226 KOG2565 Predicted hydrolases o 76.8 5.9 0.00013 43.9 6.5 108 415-533 130-251 (469)
227 COG3946 VirJ Type IV secretory 76.6 5.7 0.00012 44.5 6.4 59 464-524 278-339 (456)
228 PF14560 Ubiquitin_2: Ubiquiti 76.4 3.6 7.7E-05 35.9 4.0 55 93-150 17-71 (87)
229 cd06397 PB1_UP1 Uncharacterize 76.2 8.4 0.00018 33.6 6.0 62 85-152 6-67 (82)
230 cd06404 PB1_aPKC PB1 domain is 74.0 17 0.00036 32.0 7.3 73 88-167 8-80 (83)
231 cd01789 Alp11_N Ubiquitin-like 73.1 7 0.00015 34.1 5.0 52 94-149 17-68 (84)
232 PF04083 Abhydro_lipase: Parti 72.7 4.7 0.0001 33.4 3.6 35 413-447 17-60 (63)
233 KOG2541 Palmitoyl protein thio 72.5 30 0.00065 37.0 10.2 84 430-532 24-113 (296)
234 PLN02633 palmitoyl protein thi 71.9 30 0.00065 37.7 10.4 87 428-533 24-116 (314)
235 TIGR01849 PHB_depoly_PhaZ poly 71.5 11 0.00023 42.7 7.2 62 463-532 120-189 (406)
236 KOG2182 Hydrolytic enzymes of 69.9 31 0.00066 39.8 10.3 96 428-533 83-194 (514)
237 PLN02606 palmitoyl-protein thi 69.6 34 0.00073 37.3 10.1 86 428-533 25-117 (306)
238 PF11470 TUG-UBL1: GLUT4 regul 68.8 6.4 0.00014 33.0 3.6 35 88-122 5-39 (65)
239 cd06403 PB1_Par6 The PB1 domai 68.6 26 0.00055 30.6 7.2 53 93-150 15-67 (80)
240 PF08237 PE-PPE: PE-PPE domain 68.4 13 0.00029 38.5 6.7 60 473-532 2-69 (225)
241 COG1073 Hydrolases of the alph 65.7 1.7 3.8E-05 44.5 -0.5 158 429-623 87-260 (299)
242 KOG1551 Uncharacterized conser 63.8 8.7 0.00019 40.8 4.2 99 417-532 100-216 (371)
243 PF03096 Ndr: Ndr family; Int 63.2 18 0.00039 38.9 6.5 104 422-538 14-128 (283)
244 PF01083 Cutinase: Cutinase; 62.9 25 0.00054 35.0 7.2 57 473-531 39-101 (179)
245 COG3727 Vsr DNA G:T-mismatch r 62.4 18 0.00039 34.5 5.6 50 430-479 57-114 (150)
246 cd00196 UBQ Ubiquitin-like pro 62.1 12 0.00025 28.0 3.8 39 87-125 5-43 (69)
247 COG2819 Predicted hydrolase of 60.2 9.3 0.0002 40.6 3.7 43 494-536 119-164 (264)
248 PF00326 Peptidase_S9: Prolyl 59.0 9.7 0.00021 38.0 3.6 40 554-593 143-183 (213)
249 cd06402 PB1_p62 The PB1 domain 57.5 57 0.0012 29.0 7.6 57 92-152 19-75 (87)
250 PF12242 Eno-Rase_NADH_b: NAD( 57.3 28 0.0006 30.2 5.4 44 493-536 21-65 (78)
251 COG1448 TyrB Aspartate/tyrosin 54.8 19 0.00041 40.1 5.1 65 428-505 169-234 (396)
252 KOG2369 Lecithin:cholesterol a 54.0 16 0.00035 41.7 4.5 37 493-531 166-202 (473)
253 PF03283 PAE: Pectinacetyleste 53.7 17 0.00037 40.4 4.7 38 493-531 138-176 (361)
254 PF08452 DNAP_B_exo_N: DNA pol 51.7 4.7 0.0001 26.2 -0.1 11 682-692 4-14 (22)
255 smart00774 WRKY DNA binding do 50.3 29 0.00062 28.6 4.3 37 325-361 22-59 (59)
256 PF11339 DUF3141: Protein of u 50.0 78 0.0017 37.0 9.1 87 430-533 69-162 (581)
257 KOG4840 Predicted hydrolases o 49.4 97 0.0021 32.5 8.8 64 465-530 58-126 (299)
258 COG3673 Uncharacterized conser 48.9 19 0.00041 39.4 3.8 43 493-536 105-147 (423)
259 PF04301 DUF452: Protein of un 47.6 55 0.0012 33.8 6.9 93 430-561 11-105 (213)
260 KOG4389 Acetylcholinesterase/B 47.5 65 0.0014 37.3 7.8 55 472-526 165-233 (601)
261 cd01812 BAG1_N Ubiquitin-like 46.3 26 0.00056 28.7 3.6 34 89-122 9-42 (71)
262 KOG1283 Serine carboxypeptidas 44.0 1E+02 0.0022 33.9 8.4 111 416-531 11-142 (414)
263 cd06405 PB1_Mekk2_3 The PB1 do 42.5 1.4E+02 0.0031 25.9 7.3 63 84-156 5-67 (79)
264 smart00314 RA Ras association 41.7 81 0.0018 27.3 6.2 30 89-118 15-44 (90)
265 cd06409 PB1_MUG70 The MUG70 pr 41.4 83 0.0018 27.9 6.1 61 92-155 13-74 (86)
266 PF06309 Torsin: Torsin; Inte 41.2 56 0.0012 31.1 5.3 23 426-448 48-70 (127)
267 PF09994 DUF2235: Uncharacteri 40.8 36 0.00078 36.3 4.5 39 493-532 75-113 (277)
268 PF11543 UN_NPL4: Nuclear pore 40.5 38 0.00083 29.4 3.8 36 77-120 9-44 (80)
269 cd01818 TIAM1_RBD Ubiquitin do 40.0 81 0.0018 27.4 5.5 47 76-129 3-49 (77)
270 PF00788 RA: Ras association ( 39.9 43 0.00093 28.7 4.1 55 91-149 18-74 (93)
271 cd01796 DDI1_N DNA damage indu 39.6 39 0.00085 28.2 3.7 35 88-122 8-42 (71)
272 PF14201 DUF4318: Domain of un 39.0 41 0.00088 29.0 3.6 33 291-323 10-42 (74)
273 PF04684 BAF1_ABF1: BAF1 / ABF 38.7 66 0.0014 36.7 6.2 59 288-346 21-80 (496)
274 smart00213 UBQ Ubiquitin homol 37.7 53 0.0012 25.8 4.1 32 91-122 11-42 (64)
275 PF12436 USP7_ICP0_bdg: ICP0-b 37.6 19 0.0004 37.9 1.7 31 92-122 192-222 (249)
276 COG3007 Uncharacterized paraqu 37.3 3.7E+02 0.008 29.4 11.1 129 493-648 22-159 (398)
277 PF09757 Arb2: Arb2 domain; I 36.1 12 0.00026 37.2 0.0 56 428-487 97-153 (178)
278 PF06259 Abhydrolase_8: Alpha/ 36.0 90 0.002 31.3 6.2 104 426-538 15-138 (177)
279 cd01806 Nedd8 Nebb8-like ubiq 32.3 67 0.0014 26.5 4.0 47 92-148 13-59 (76)
280 cd01809 Scythe_N Ubiquitin-lik 32.2 75 0.0016 25.9 4.2 34 89-122 10-43 (72)
281 PF11976 Rad60-SLD: Ubiquitin- 32.1 71 0.0015 26.3 4.1 34 89-122 10-44 (72)
282 cd01768 RA RA (Ras-associating 31.8 88 0.0019 26.8 4.8 29 89-117 12-40 (87)
283 cd01799 Hoil1_N Ubiquitin-like 31.7 55 0.0012 27.9 3.4 35 88-122 11-45 (75)
284 cd01798 parkin_N amino-termina 30.1 60 0.0013 26.8 3.3 34 89-122 8-41 (70)
285 cd03012 TlpA_like_DipZ_like Tl 29.5 1.2E+02 0.0026 27.7 5.6 78 430-529 24-102 (126)
286 TIGR00632 vsr DNA mismatch end 29.5 1.2E+02 0.0026 28.5 5.4 18 462-479 96-113 (117)
287 KOG2029 Uncharacterized conser 29.0 1.1E+02 0.0024 36.2 6.1 56 474-530 479-545 (697)
288 cd06399 PB1_P40 The PB1 domain 29.0 1.1E+02 0.0024 27.2 4.7 59 88-153 12-74 (92)
289 PF03709 OKR_DC_1_N: Orn/Lys/A 28.9 98 0.0021 28.4 4.8 55 464-520 8-77 (115)
290 cd01807 GDX_N ubiquitin-like d 27.6 95 0.0021 25.9 4.1 51 88-148 9-59 (74)
291 cd01803 Ubiquitin Ubiquitin. U 27.1 82 0.0018 26.0 3.6 33 90-122 11-43 (76)
292 cd01769 UBL Ubiquitin-like dom 26.8 83 0.0018 25.0 3.5 33 90-122 8-40 (69)
293 cd01760 RBD Ubiquitin-like dom 26.7 96 0.0021 26.5 3.9 35 91-125 11-45 (72)
294 smart00455 RBD Raf-like Ras-bi 25.3 97 0.0021 26.2 3.7 33 92-124 12-44 (70)
295 PF14039 YusW: YusW-like prote 25.2 1.1E+02 0.0023 27.5 4.2 50 79-129 34-91 (92)
296 PF02196 RBD: Raf-like Ras-bin 25.0 1.4E+02 0.003 25.3 4.6 33 91-123 12-44 (71)
297 KOG3465 Signal recognition par 24.7 1.4E+02 0.0031 26.2 4.5 29 101-129 6-34 (86)
298 cd01805 RAD23_N Ubiquitin-like 24.3 1.3E+02 0.0029 24.9 4.5 50 88-147 9-60 (77)
299 cd01800 SF3a120_C Ubiquitin-li 23.5 1E+02 0.0022 26.0 3.6 50 89-148 7-56 (76)
300 cd01813 UBP_N UBP ubiquitin pr 22.8 1E+02 0.0022 26.1 3.4 52 89-148 9-61 (74)
301 PLN03229 acetyl-coenzyme A car 22.1 3.8E+02 0.0082 32.8 8.9 99 429-528 198-301 (762)
302 cd07224 Pat_like Patatin-like 21.7 1.1E+02 0.0024 31.6 4.2 38 496-534 15-52 (233)
303 PLN03230 acetyl-coenzyme A car 21.7 3.8E+02 0.0082 30.7 8.4 98 429-527 177-279 (431)
304 PF09379 FERM_N: FERM N-termin 21.6 1.3E+02 0.0027 25.2 3.8 37 89-126 6-42 (80)
305 cd01782 AF6_RA_repeat1 Ubiquit 21.6 1.3E+02 0.0029 27.8 4.0 26 91-116 37-62 (112)
306 PF10081 Abhydrolase_9: Alpha/ 21.2 1.6E+02 0.0034 31.9 5.1 64 464-527 52-125 (289)
307 PTZ00044 ubiquitin; Provisiona 20.8 1.3E+02 0.0028 25.0 3.6 33 90-122 11-43 (76)
308 cd07018 S49_SppA_67K_type Sign 20.4 9.2E+02 0.02 24.6 12.6 40 576-617 122-161 (222)
309 cd01804 midnolin_N Ubiquitin-l 20.4 1.2E+02 0.0025 25.9 3.3 34 89-122 11-44 (78)
310 PF02017 CIDE-N: CIDE-N domain 20.3 1.5E+02 0.0032 25.9 3.9 34 86-122 10-43 (78)
No 1
>PF03108 DBD_Tnp_Mut: MuDR family transposase; InterPro: IPR004332 The plant MuDR transposase domain is present in plant proteins that are presumed to be the transposases for Mutator transposable elements [, ]. The function of these proteins is unknown. More information about these proteins can be found at Protein of the Month: Transposase [].
Probab=99.77 E-value=8.2e-19 Score=146.40 Aligned_cols=66 Identities=38% Similarity=0.739 Sum_probs=64.6
Q ss_pred cccccCcccCCHHHHHHHHHHHhhhccceEEEeeecCcEEEEEecCCCCccEEEEEeeCCCCeEEE
Q 040989 287 EDIVCGKTFTSKKDLIKKLKLGAAKKNFAFKVSKSTKDRFEVVCADTNCKWRLRATKTAEDEYFEI 352 (700)
Q Consensus 287 ~~l~vG~~F~~k~~~r~al~~~aI~~~f~~~~~kS~~~r~~~~C~~~gC~Wri~A~~~~~~~~f~I 352 (700)
+.|.+||+|+|+++||+||++|||+++|+|++.||+++||+++|.+++|||||+|++.++++.|+|
T Consensus 2 ~~l~~G~~F~~~~e~k~av~~yai~~~~~~~v~ksd~~r~~~~C~~~~C~Wrv~as~~~~~~~~~I 67 (67)
T PF03108_consen 2 PELEVGQTFPSKEEFKEAVREYAIKNGFEFKVKKSDKKRYRAKCKDKGCPWRVRASKRKRSDTFQI 67 (67)
T ss_pred CccccCCEECCHHHHHHHHHHHHHhcCcEEEEeccCCEEEEEEEcCCCCCEEEEEEEcCCCCEEEC
Confidence 679999999999999999999999999999999999999999999999999999999999999987
No 2
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.51 E-value=1.5e-13 Score=143.72 Aligned_cols=113 Identities=21% Similarity=0.247 Sum_probs=88.6
Q ss_pred cceeccCCeEEEEee--cC---CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCc
Q 040989 411 PTVELRNGTDVIWQI--PD---SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRC 485 (700)
Q Consensus 411 p~~~~~~G~~l~~~~--P~---~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~ 485 (700)
.-..+.+|.+++++. |. .|||+|+++||.+.+...++ ..++.+|+..||+|+++|++||+
T Consensus 30 ~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~---------------~~~a~~l~~~g~~v~a~D~~GhG 94 (313)
T KOG1455|consen 30 SFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRY---------------QSTAKRLAKSGFAVYAIDYEGHG 94 (313)
T ss_pred eeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhH---------------HHHHHHHHhCCCeEEEeeccCCC
Confidence 344688999998774 63 58999999999998875544 34889999999999999999876
Q ss_pred CCCc---------ccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 486 WTLG---------EERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 486 w~~~---------~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
.+-+ .-+.|+.+-++..+.+....++|.||+|+||||++++.++.+.| |+|++
T Consensus 95 ~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~i 158 (313)
T KOG1455|consen 95 RSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAI 158 (313)
T ss_pred cCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccce
Confidence 6531 22355555556656666778999999999999999999999864 77754
No 3
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.50 E-value=2.1e-13 Score=139.45 Aligned_cols=188 Identities=16% Similarity=0.255 Sum_probs=122.2
Q ss_pred EEEEeecC----CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCC-----CCcCCCc-
Q 040989 420 DVIWQIPD----SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSA-----GRCWTLG- 489 (700)
Q Consensus 420 ~l~~~~P~----~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~-----g~~w~~~- 489 (700)
.|..++|+ .|.|+||+||||++++.+|... ..+...+.++||.|++|+.. ++||.|.
T Consensus 2 ~Y~lYvP~~~~~~~~PLVv~LHG~~~~a~~~~~~-------------s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~ 68 (220)
T PF10503_consen 2 SYRLYVPPGAPRGPVPLVVVLHGCGQSAEDFAAG-------------SGWNALADREGFIVVYPEQSRRANPQGCWNWFS 68 (220)
T ss_pred cEEEecCCCCCCCCCCEEEEeCCCCCCHHHHHhh-------------cCHHHHhhcCCeEEEcccccccCCCCCcccccc
Confidence 35566776 2569999999999999887543 23567788999999999963 4799862
Q ss_pred -------ccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEEEEEecCC-CCCCCCCCCCCCeE
Q 040989 490 -------EERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIALMIAEGL-FDQMDIPEDYPPTL 559 (700)
Q Consensus 490 -------~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv~~I~~G~-~~~~~~~~~yPP~l 559 (700)
.|...++++++++.++++++..+||+.|+|+||+|+..|++.+| |+|+. +.+|. +....-...... .
T Consensus 69 ~~~~~g~~d~~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a--~~sG~~~~~a~~~~~a~~-~ 145 (220)
T PF10503_consen 69 DDQQRGGGDVAFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVA--VVSGVPYGCAASGASALS-A 145 (220)
T ss_pred cccccCccchhhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEE--eecccccccccCcccHHH-H
Confidence 35678899999999999999999999999999999999999986 77754 34443 221100000000 0
Q ss_pred EEccCCChhHHHHHHHHHHHHHhCCCeeeEEEecCCcCCccccccCCCCCCHHHHHHHHHHHHHc-ccccCCCCccc
Q 040989 560 FVHMPKDSYRQRKIGEFLVVLRNKGIDVAEIECMEFPLSRNFFTDRIPGLEQANSTKLFELFQEK-GFIDENGYMRS 635 (700)
Q Consensus 560 f~hm~~D~~~~~~i~~~~~~L~~~gvp~~~i~~~~~~v~p~~f~~rdp~I~~~~S~~l~~al~~~-g~ld~~g~l~~ 635 (700)
+-.+.+. .+..........=...+.|+..+| .+.|..|.+..+..+.+.+.+. |+-+..|-+..
T Consensus 146 m~~g~~~-~p~~~~~a~~~~g~~~~~P~~v~h-----------G~~D~tV~~~n~~~~~~q~~~~~g~~~~~~~~~~ 210 (220)
T PF10503_consen 146 MRSGPRP-APAAAWGARSDAGAYPGYPRIVFH-----------GTADTTVNPQNADQLVAQWLNVHGLAASRGAVRG 210 (220)
T ss_pred hhCCCCC-ChHHHHHhhhhccCCCCCCEEEEe-----------cCCCCccCcchHHHHHHHHHHccCcccCCCCcCC
Confidence 0111111 111110000000001245555444 4789999999999999988864 55444555543
No 4
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.49 E-value=2.2e-13 Score=137.76 Aligned_cols=150 Identities=19% Similarity=0.237 Sum_probs=106.8
Q ss_pred EEeecC---CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCC-----CcCCCc----
Q 040989 422 IWQIPD---SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAG-----RCWTLG---- 489 (700)
Q Consensus 422 ~~~~P~---~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g-----~~w~~~---- 489 (700)
+.++|+ .++|+||++||+++++.++... ..+...+.+.||.|++++++| .||.|.
T Consensus 2 ~ly~P~~~~~~~P~vv~lHG~~~~~~~~~~~-------------~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~ 68 (212)
T TIGR01840 2 YVYVPAGLTGPRALVLALHGCGQTASAYVID-------------WGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHH 68 (212)
T ss_pred EEEcCCCCCCCCCEEEEeCCCCCCHHHHhhh-------------cChHHHHHhCCeEEEecCCcCccccCCCCCCCCccc
Confidence 345675 3689999999999887665311 014456677999999999976 377542
Q ss_pred -----ccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEEEEEecCCC-CCC------------
Q 040989 490 -----EERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIALMIAEGLF-DQM------------ 549 (700)
Q Consensus 490 -----~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv~~I~~G~~-~~~------------ 549 (700)
.+..++..+++++.++++++..+++++|+||||++++.++.++| |++++. .+|.. ...
T Consensus 69 ~~~~~~~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~ 146 (212)
T TIGR01840 69 RARGTGEVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGAS--NAGLPYGEASSSISATPQMCT 146 (212)
T ss_pred cCCCCccHHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEe--ecCCcccccccchhhHhhcCC
Confidence 24678889999999999888899999999999999999999886 777542 33321 100
Q ss_pred ----------------CCCCCCCCeEEEccCCChhH-HHHHHHHHHHHHhC-CCe
Q 040989 550 ----------------DIPEDYPPTLFVHMPKDSYR-QRKIGEFLVVLRNK-GID 586 (700)
Q Consensus 550 ----------------~~~~~yPP~lf~hm~~D~~~-~~~i~~~~~~L~~~-gvp 586 (700)
+.....||++++|+.+|... .....+..+.|++. |++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~~~~~~ 201 (212)
T TIGR01840 147 AATAASVCRLVRGMQSEYNGPTPIMSVVHGDADYTVLPGNADEIRDAMLKVYGET 201 (212)
T ss_pred CCCHHHHHHHHhccCCcccCCCCeEEEEEcCCCceeCcchHHHHHHHHHHhcCCC
Confidence 11235788888999999863 44555566666655 443
No 5
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.42 E-value=9.1e-12 Score=133.75 Aligned_cols=195 Identities=16% Similarity=0.194 Sum_probs=123.6
Q ss_pred eccCCeEEEEee--cC---CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCC
Q 040989 414 ELRNGTDVIWQI--PD---SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTL 488 (700)
Q Consensus 414 ~~~~G~~l~~~~--P~---~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~ 488 (700)
...+|.+++|+. |. +++++|||+||.+.+....+ ..++..|.++||.|+++|++|++.+.
T Consensus 38 ~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~---------------~~~~~~L~~~Gy~V~~~D~rGhG~S~ 102 (330)
T PLN02298 38 TSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTF---------------QSTAIFLAQMGFACFALDLEGHGRSE 102 (330)
T ss_pred EcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceeh---------------hHHHHHHHhCCCEEEEecCCCCCCCC
Confidence 456899997754 43 46899999999976642212 23567788999999999999876542
Q ss_pred c---------ccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEEEEEecCCCCC-C-------
Q 040989 489 G---------EERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIALMIAEGLFDQ-M------- 549 (700)
Q Consensus 489 ~---------~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv~~I~~G~~~~-~------- 549 (700)
. ....|+.++++.+..+..+.+.|++++||||||++|+.++.+.| ++++++......... .
T Consensus 103 ~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~ 182 (330)
T PLN02298 103 GLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIP 182 (330)
T ss_pred CccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHH
Confidence 1 12467888888887665556789999999999999999998875 677653221110000 0
Q ss_pred C---CCCCCCCeEEE--------ccC----------CChh------H---H----HHHHHHHHHHHhCCCeeeEEEecCC
Q 040989 550 D---IPEDYPPTLFV--------HMP----------KDSY------R---Q----RKIGEFLVVLRNKGIDVAEIECMEF 595 (700)
Q Consensus 550 ~---~~~~yPP~lf~--------hm~----------~D~~------~---~----~~i~~~~~~L~~~gvp~~~i~~~~~ 595 (700)
. ....+-|.+.. ... .|+. . . .........|.+..+|++.++.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G--- 259 (330)
T PLN02298 183 QILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHG--- 259 (330)
T ss_pred HHHHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEec---
Confidence 0 00001111100 000 0110 0 0 0111123456678899999988
Q ss_pred cCCccccccCCCCCCHHHHHHHHHHHH----HcccccCCCCcc
Q 040989 596 PLSRNFFTDRIPGLEQANSTKLFELFQ----EKGFIDENGYMR 634 (700)
Q Consensus 596 ~v~p~~f~~rdp~I~~~~S~~l~~al~----~~g~ld~~g~l~ 634 (700)
+.|+.++.+.++++++.+. +.-.+++.|...
T Consensus 260 --------~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~ 294 (330)
T PLN02298 260 --------SADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSL 294 (330)
T ss_pred --------CCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeee
Confidence 7899999999999999885 345667656653
No 6
>PRK13604 luxD acyl transferase; Provisional
Probab=99.40 E-value=7.4e-12 Score=133.47 Aligned_cols=189 Identities=15% Similarity=0.229 Sum_probs=126.2
Q ss_pred ceeccCCeEE-EEee-cC----CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCC-
Q 040989 412 TVELRNGTDV-IWQI-PD----SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGR- 484 (700)
Q Consensus 412 ~~~~~~G~~l-~~~~-P~----~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~- 484 (700)
..++.+|.+| .|.. |. .|+++|+++||.+++...+ ..+++.|.++||+|+.+|.+|+
T Consensus 13 ~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~----------------~~~A~~La~~G~~vLrfD~rg~~ 76 (307)
T PRK13604 13 VICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHF----------------AGLAEYLSSNGFHVIRYDSLHHV 76 (307)
T ss_pred eEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHH----------------HHHHHHHHHCCCEEEEecCCCCC
Confidence 3467789999 5555 53 3579999999999875321 4588999999999999998754
Q ss_pred cCC--------CcccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccCcCeEEEEEecCCCCCC-C-----
Q 040989 485 CWT--------LGEERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLRFSSIALMIAEGLFDQM-D----- 550 (700)
Q Consensus 485 ~w~--------~~~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~~~glv~~I~~G~~~~~-~----- 550 (700)
+-+ ......|+.++++|++++. ..+++|+||||||++|...|...++++++ +..++..+ +
T Consensus 77 GeS~G~~~~~t~s~g~~Dl~aaid~lk~~~---~~~I~LiG~SmGgava~~~A~~~~v~~lI---~~sp~~~l~d~l~~~ 150 (307)
T PRK13604 77 GLSSGTIDEFTMSIGKNSLLTVVDWLNTRG---INNLGLIAASLSARIAYEVINEIDLSFLI---TAVGVVNLRDTLERA 150 (307)
T ss_pred CCCCCccccCcccccHHHHHHHHHHHHhcC---CCceEEEEECHHHHHHHHHhcCCCCCEEE---EcCCcccHHHHHHHh
Confidence 332 2234689999999998752 45899999999999998888776766644 33333221 0
Q ss_pred CCCC---CCC----eEE-E--------ccCCChhHH--HHHHHHHHHHHhCCCeeeEEEecCCcCCccccccCCCCCCHH
Q 040989 551 IPED---YPP----TLF-V--------HMPKDSYRQ--RKIGEFLVVLRNKGIDVAEIECMEFPLSRNFFTDRIPGLEQA 612 (700)
Q Consensus 551 ~~~~---yPP----~lf-~--------hm~~D~~~~--~~i~~~~~~L~~~gvp~~~i~~~~~~v~p~~f~~rdp~I~~~ 612 (700)
.... +|+ ..+ + ...+|.+.. ..+...++.+++..+|+..+|. +.|+.|+.+
T Consensus 151 ~~~~~~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG-----------~~D~lVp~~ 219 (307)
T PRK13604 151 LGYDYLSLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTA-----------NNDSWVKQS 219 (307)
T ss_pred hhcccccCcccccccccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEc-----------CCCCccCHH
Confidence 1111 121 100 0 011121110 1122334556677899999998 789999999
Q ss_pred HHHHHHHHHH----HcccccCCCCc
Q 040989 613 NSTKLFELFQ----EKGFIDENGYM 633 (700)
Q Consensus 613 ~S~~l~~al~----~~g~ld~~g~l 633 (700)
.|++++++++ ++-.+++.+..
T Consensus 220 ~s~~l~e~~~s~~kkl~~i~Ga~H~ 244 (307)
T PRK13604 220 EVIDLLDSIRSEQCKLYSLIGSSHD 244 (307)
T ss_pred HHHHHHHHhccCCcEEEEeCCCccc
Confidence 9999999986 45567776554
No 7
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.37 E-value=1.6e-11 Score=133.35 Aligned_cols=194 Identities=15% Similarity=0.197 Sum_probs=121.6
Q ss_pred ccCCeEEEEee--cC--CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCc-
Q 040989 415 LRNGTDVIWQI--PD--SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLG- 489 (700)
Q Consensus 415 ~~~G~~l~~~~--P~--~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~- 489 (700)
+.+|.+++|+. |. .++++|||+||.+.+...+|. .++..|.++||.|+++|++|++.+-.
T Consensus 68 ~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~---------------~~~~~l~~~g~~v~~~D~~G~G~S~~~ 132 (349)
T PLN02385 68 NSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFE---------------GIARKIASSGYGVFAMDYPGFGLSEGL 132 (349)
T ss_pred cCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHH---------------HHHHHHHhCCCEEEEecCCCCCCCCCC
Confidence 46788997765 64 578999999999887654443 25677888999999999998765421
Q ss_pred --------ccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEEEEEecCCCCC-C-C-------
Q 040989 490 --------EERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIALMIAEGLFDQ-M-D------- 550 (700)
Q Consensus 490 --------~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv~~I~~G~~~~-~-~------- 550 (700)
..+.++.++++.+..+..+.+.|++|+||||||++++.++.+.| +++++++-.-..+.. . .
T Consensus 133 ~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~ 212 (349)
T PLN02385 133 HGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQI 212 (349)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHH
Confidence 12345555555555443456779999999999999999998875 677653211000000 0 0
Q ss_pred -------CCC--CCCCeEEEcc-CCChh----------------HH----H---HHHHHHHHHHhCCCeeeEEEecCCcC
Q 040989 551 -------IPE--DYPPTLFVHM-PKDSY----------------RQ----R---KIGEFLVVLRNKGIDVAEIECMEFPL 597 (700)
Q Consensus 551 -------~~~--~yPP~lf~hm-~~D~~----------------~~----~---~i~~~~~~L~~~gvp~~~i~~~~~~v 597 (700)
.+. .+|+..+... .++.. .. + ........|.+..+|+..++.
T Consensus 213 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G----- 287 (349)
T PLN02385 213 LILLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHG----- 287 (349)
T ss_pred HHHHHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEe-----
Confidence 000 0111111100 01110 00 0 001122345667899988888
Q ss_pred CccccccCCCCCCHHHHHHHHHHHH----HcccccCCCCcc
Q 040989 598 SRNFFTDRIPGLEQANSTKLFELFQ----EKGFIDENGYMR 634 (700)
Q Consensus 598 ~p~~f~~rdp~I~~~~S~~l~~al~----~~g~ld~~g~l~ 634 (700)
.+|+.++.+.++.+++.+. +.-++++.|+..
T Consensus 288 ------~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l 322 (349)
T PLN02385 288 ------EADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSI 322 (349)
T ss_pred ------CCCCccChHHHHHHHHHcCCCCceEEEeCCCeeec
Confidence 7889999999999999873 456777766654
No 8
>PHA02857 monoglyceride lipase; Provisional
Probab=99.34 E-value=5.7e-11 Score=123.68 Aligned_cols=190 Identities=14% Similarity=0.150 Sum_probs=120.8
Q ss_pred ccCCeEEEEee--cC-CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCc--
Q 040989 415 LRNGTDVIWQI--PD-SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLG-- 489 (700)
Q Consensus 415 ~~~G~~l~~~~--P~-~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~-- 489 (700)
+.+|..++|++ |. .|+++||++||.+.++..| ..++..|.++||.|+++|.+|++-+..
T Consensus 7 ~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~----------------~~~~~~l~~~g~~via~D~~G~G~S~~~~ 70 (276)
T PHA02857 7 NLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRY----------------EELAENISSLGILVFSHDHIGHGRSNGEK 70 (276)
T ss_pred cCCCCEEEEEeccCCCCCCEEEEEeCCCccccchH----------------HHHHHHHHhCCCEEEEccCCCCCCCCCcc
Confidence 45888887765 64 6799999999998776443 236888889999999999998765421
Q ss_pred -------ccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEEEEEecCCCCCCCC---------
Q 040989 490 -------EERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIALMIAEGLFDQMDI--------- 551 (700)
Q Consensus 490 -------~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv~~I~~G~~~~~~~--------- 551 (700)
..+.++.+.++.+.+++ ...|++++|+||||++|+.+|.+.| +++++++ +. .......
T Consensus 71 ~~~~~~~~~~~d~~~~l~~~~~~~--~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~-~p-~~~~~~~~~~~~~~~~ 146 (276)
T PHA02857 71 MMIDDFGVYVRDVVQHVVTIKSTY--PGVPVFLLGHSMGATISILAAYKNPNLFTAMILM-SP-LVNAEAVPRLNLLAAK 146 (276)
T ss_pred CCcCCHHHHHHHHHHHHHHHHhhC--CCCCEEEEEcCchHHHHHHHHHhCccccceEEEe-cc-ccccccccHHHHHHHH
Confidence 12344555555554443 4579999999999999999998876 6776532 21 1110000
Q ss_pred --CCCCCCeEEEc-----cC----------CChh------H---HHH----HHHHHHHHHhCCCeeeEEEecCCcCCccc
Q 040989 552 --PEDYPPTLFVH-----MP----------KDSY------R---QRK----IGEFLVVLRNKGIDVAEIECMEFPLSRNF 601 (700)
Q Consensus 552 --~~~yPP~lf~h-----m~----------~D~~------~---~~~----i~~~~~~L~~~gvp~~~i~~~~~~v~p~~ 601 (700)
...+|...... .. .|+. . ... .......|++..+|+..++.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G--------- 217 (276)
T PHA02857 147 LMGIFYPNKIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQG--------- 217 (276)
T ss_pred HHHHhCCCCccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEec---------
Confidence 00011100000 00 0110 0 000 11223566778899988877
Q ss_pred cccCCCCCCHHHHHHHHHHHH---HcccccCCCCccc
Q 040989 602 FTDRIPGLEQANSTKLFELFQ---EKGFIDENGYMRS 635 (700)
Q Consensus 602 f~~rdp~I~~~~S~~l~~al~---~~g~ld~~g~l~~ 635 (700)
+.|+.++.+.+..+.+.+. +.-.+++.|....
T Consensus 218 --~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~ 252 (276)
T PHA02857 218 --TNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLH 252 (276)
T ss_pred --CCCCcCChHHHHHHHHHccCCceEEEeCCCccccc
Confidence 6889999999999999874 4566787777654
No 9
>cd06410 PB1_UP2 Uncharacterized protein 2. The PB1 domain is a modular domain mediating specific protein-protein interaction which play a role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions.
Probab=99.32 E-value=4.1e-12 Score=113.55 Aligned_cols=82 Identities=26% Similarity=0.463 Sum_probs=73.9
Q ss_pred EEEECCEEE-EcCCeeEEEeCCeeceeecCCCCCHHHHHHHHHhhcccCCceeEEEEEEEEeCCCCCceeeeecchhHHH
Q 040989 69 LVMYDGKWF-CSPSGYYLYSGGQTKGIIVSDDITYKELVDRLYGIVKVDTNEYVITMKSLYKANIPTMPVEIVDDDDVRF 147 (700)
Q Consensus 69 ~~~~gGe~v-~~~~G~y~Y~G~~~kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l~~k~~~~~~~~~~pi~I~dD~Dv~~ 147 (700)
||++||+|+ +..+|.+.|.||+.+.|.|++.|||+||+++|++.++++.. ++|+|.+|.+..-.+++|+||+|++.
T Consensus 1 ~cs~GG~i~pr~~dg~l~Y~GG~tr~i~V~r~~s~~el~~kl~~~~~~~~~---~~lky~Lp~edld~Lisv~~DeDl~~ 77 (97)
T cd06410 1 LCSYGGRILPRPPDGQLRYVGGETRIVSVDRSISFKELVSKLSELFGAGVV---VTLKYQLPDEDLDALISVSNDEDLKN 77 (97)
T ss_pred CcccCCEEeCcCCCCCEEEcCCceEEEEEcCCCCHHHHHHHHHHHhCCCCc---eEEEEEcCCCCcceeEEecCcHHHHH
Confidence 699999999 77999999999999999999999999999999999999876 58899887544345999999999999
Q ss_pred HHhhcc
Q 040989 148 FIQENA 153 (700)
Q Consensus 148 ml~~~~ 153 (700)
|+++..
T Consensus 78 M~~e~~ 83 (97)
T cd06410 78 MMEEYD 83 (97)
T ss_pred HHHhhc
Confidence 998765
No 10
>PRK10566 esterase; Provisional
Probab=99.32 E-value=6.4e-11 Score=121.46 Aligned_cols=181 Identities=17% Similarity=0.192 Sum_probs=109.4
Q ss_pred CCeEEEEeecC----CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCC----
Q 040989 417 NGTDVIWQIPD----SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTL---- 488 (700)
Q Consensus 417 ~G~~l~~~~P~----~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~---- 488 (700)
.|...+-+.|. .+.|+||++||.+++...+ ..+++.|.++||+|+++|++|++-+.
T Consensus 10 ~~~~~~~~~p~~~~~~~~p~vv~~HG~~~~~~~~----------------~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~ 73 (249)
T PRK10566 10 AGIEVLHAFPAGQRDTPLPTVFFYHGFTSSKLVY----------------SYFAVALAQAGFRVIMPDAPMHGARFSGDE 73 (249)
T ss_pred cCcceEEEcCCCCCCCCCCEEEEeCCCCcccchH----------------HHHHHHHHhCCCEEEEecCCcccccCCCcc
Confidence 34444434553 2468999999997775432 23678899999999999998753211
Q ss_pred -----------cccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC-cCeEEEEEecCCCCCCCCCCCCC
Q 040989 489 -----------GEERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR-FSSIALMIAEGLFDQMDIPEDYP 556 (700)
Q Consensus 489 -----------~~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~-~~glv~~I~~G~~~~~~~~~~yP 556 (700)
.....++.++++++.++..++..+++++|+|+||++++.++.+.+ +.+.+.++..+.+.... ...+|
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 152 (249)
T PRK10566 74 ARRLNHFWQILLQNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFTSLA-RTLFP 152 (249)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHHHHH-HHhcc
Confidence 012356667777777665577889999999999999999998765 33333222233322110 01133
Q ss_pred CeEEEccCCChhHHHHHHHH------HHHHHhC-CCeeeEEEecCCcCCccccccCCCCCCHHHHHHHHHHHHHccc
Q 040989 557 PTLFVHMPKDSYRQRKIGEF------LVVLRNK-GIDVAEIECMEFPLSRNFFTDRIPGLEQANSTKLFELFQEKGF 626 (700)
Q Consensus 557 P~lf~hm~~D~~~~~~i~~~------~~~L~~~-gvp~~~i~~~~~~v~p~~f~~rdp~I~~~~S~~l~~al~~~g~ 626 (700)
|... -.+.+.......... ...+.+. ..|+..++. ..|+.|+.+.+++|+++|+..|.
T Consensus 153 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G-----------~~D~~v~~~~~~~l~~~l~~~g~ 217 (249)
T PRK10566 153 PLIP-ETAAQQAEFNNIVAPLAEWEVTHQLEQLADRPLLLWHG-----------LADDVVPAAESLRLQQALRERGL 217 (249)
T ss_pred cccc-cccccHHHHHHHHHHHhhcChhhhhhhcCCCCEEEEEc-----------CCCCcCCHHHHHHHHHHHHhcCC
Confidence 3210 001111110000000 1223333 467766666 78999999999999999987653
No 11
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.29 E-value=2.3e-11 Score=126.94 Aligned_cols=164 Identities=16% Similarity=0.155 Sum_probs=115.2
Q ss_pred eEEEEeecC-C--CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCC------CcCCC-
Q 040989 419 TDVIWQIPD-S--PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAG------RCWTL- 488 (700)
Q Consensus 419 ~~l~~~~P~-~--pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g------~~w~~- 488 (700)
+++.+++|. . ..|+||+||||++++..+-.. ..+-+.|.+.||.|+++|..+ +||.+
T Consensus 47 r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~-------------sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~ 113 (312)
T COG3509 47 RSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHG-------------TGWDALADREGFLVAYPDGYDRAWNANGCGNWF 113 (312)
T ss_pred cceEEEcCCCCCCCCCEEEEEecCCCChHHhhcc-------------cchhhhhcccCcEEECcCccccccCCCcccccC
Confidence 455666776 2 357999999999998765332 124567889999999998754 56666
Q ss_pred -c-------ccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEEEEEecCCCCCCCCCCCCC--
Q 040989 489 -G-------EERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIALMIAEGLFDQMDIPEDYP-- 556 (700)
Q Consensus 489 -~-------~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv~~I~~G~~~~~~~~~~yP-- 556 (700)
+ .|+.++++++..+..++++++.++|+.|.|.||.|+..|++.+| |+|+. .|+ |... .+ ....|
T Consensus 114 ~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A-~VA-g~~~-~~-~a~~~~r 189 (312)
T COG3509 114 GPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIA-PVA-GLLA-LG-VACTPPR 189 (312)
T ss_pred CcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCccccccee-eee-cccC-CC-cccCCCC
Confidence 3 35688899999999999999999999999999999999999975 77654 222 2210 11 11222
Q ss_pred --CeEEEccCCChhHHHHHHHHHHHHHhCCCeeeEEEecCCcCCc-cccccCCCCCCHHHHHHHHHHHH
Q 040989 557 --PTLFVHMPKDSYRQRKIGEFLVVLRNKGIDVAEIECMEFPLSR-NFFTDRIPGLEQANSTKLFELFQ 622 (700)
Q Consensus 557 --P~lf~hm~~D~~~~~~i~~~~~~L~~~gvp~~~i~~~~~~v~p-~~f~~rdp~I~~~~S~~l~~al~ 622 (700)
+.+-.|+.+|+.. +.....+ -.|.+++-.++...+.+-++++.
T Consensus 190 p~~~m~~~G~~Dp~~-----------------------p~~gG~~~~g~g~~~~~v~~~~~~~~Waa~n 235 (312)
T COG3509 190 PVSVMAFHGTADPLN-----------------------PYHGGGVPIGRGQRDGVVSAADLAARWAAVN 235 (312)
T ss_pred chhHHHhcCCCCCCC-----------------------CCCCCCcccccccccccccHHHHHHHHHHhc
Confidence 4555688888743 1111111 25567788888888888888876
No 12
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.27 E-value=1.4e-11 Score=131.70 Aligned_cols=107 Identities=20% Similarity=0.286 Sum_probs=83.9
Q ss_pred eccCCeEEEEee--cC-CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCC--
Q 040989 414 ELRNGTDVIWQI--PD-SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTL-- 488 (700)
Q Consensus 414 ~~~~G~~l~~~~--P~-~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~-- 488 (700)
...+|..++|+. +. +|+++||++||.+++...|. .++..|..+||.|+++|.||++-+.
T Consensus 15 ~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~----------------~la~~l~~~G~~V~~~D~RGhG~S~r~ 78 (298)
T COG2267 15 TGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYE----------------ELADDLAARGFDVYALDLRGHGRSPRG 78 (298)
T ss_pred ecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHH----------------HHHHHHHhCCCEEEEecCCCCCCCCCC
Confidence 457888997775 33 55699999999999987653 2789999999999999999977663
Q ss_pred --------cccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 489 --------GEERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 489 --------~~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
..-..|++++++...+.+ .++|+|++||||||.+|+.++.+++ ++|++
T Consensus 79 ~rg~~~~f~~~~~dl~~~~~~~~~~~--~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~v 136 (298)
T COG2267 79 QRGHVDSFADYVDDLDAFVETIAEPD--PGLPVFLLGHSMGGLIALLYLARYPPRIDGLV 136 (298)
T ss_pred CcCCchhHHHHHHHHHHHHHHHhccC--CCCCeEEEEeCcHHHHHHHHHHhCCccccEEE
Confidence 223456666666666543 6899999999999999999999874 55643
No 13
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.23 E-value=1.1e-10 Score=108.93 Aligned_cols=137 Identities=19% Similarity=0.251 Sum_probs=96.8
Q ss_pred EEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCcccHHHHHHHHHHHHHHcCCCCC
Q 040989 432 VLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLGEERLVVREIIRWWVERHKLEKL 511 (700)
Q Consensus 432 vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~~e~~~v~a~l~~~~~~~~l~~~ 511 (700)
+||++||.+.+...+ ..+++.++++||.|+.+|++++... ....++.++++++.+++. +..
T Consensus 1 ~vv~~HG~~~~~~~~----------------~~~~~~l~~~G~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~ 61 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDY----------------QPLAEALAEQGYAVVAFDYPGHGDS--DGADAVERVLADIRAGYP-DPD 61 (145)
T ss_dssp EEEEECTTTTTTHHH----------------HHHHHHHHHTTEEEEEESCTTSTTS--HHSHHHHHHHHHHHHHHC-TCC
T ss_pred CEEEECCCCCCHHHH----------------HHHHHHHHHCCCEEEEEecCCCCcc--chhHHHHHHHHHHHhhcC-CCC
Confidence 689999999885443 3478899999999999999987776 223477788887765544 778
Q ss_pred CEEEEecChhHHHHHHHhhcc-CcCeEEEEEecCCCCCCCCCCCCCCeEEEccCCChhH-HHHHHHHHHHHHhCCCeeeE
Q 040989 512 PLVALGASSGGYFVSALAKGL-RFSSIALMIAEGLFDQMDIPEDYPPTLFVHMPKDSYR-QRKIGEFLVVLRNKGIDVAE 589 (700)
Q Consensus 512 pl~l~G~S~GG~~a~~la~~~-~~~glv~~I~~G~~~~~~~~~~yPP~lf~hm~~D~~~-~~~i~~~~~~L~~~gvp~~~ 589 (700)
+++++|+|+||.+++.++... ++.+++. +.+.+...++.....|++|+++.+|... .+.+.+..+.++ .+.++
T Consensus 62 ~i~l~G~S~Gg~~a~~~~~~~~~v~~~v~--~~~~~~~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~---~~~~~ 136 (145)
T PF12695_consen 62 RIILIGHSMGGAIAANLAARNPRVKAVVL--LSPYPDSEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP---GPKEL 136 (145)
T ss_dssp EEEEEEETHHHHHHHHHHHHSTTESEEEE--ESESSGCHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC---SSEEE
T ss_pred cEEEEEEccCcHHHHHHhhhccceeEEEE--ecCccchhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC---CCcEE
Confidence 999999999999999999874 6777552 2222221123445569999999999875 344444444443 55555
Q ss_pred EEe
Q 040989 590 IEC 592 (700)
Q Consensus 590 i~~ 592 (700)
+.+
T Consensus 137 ~~i 139 (145)
T PF12695_consen 137 YII 139 (145)
T ss_dssp EEE
T ss_pred EEe
Confidence 544
No 14
>PRK11460 putative hydrolase; Provisional
Probab=99.21 E-value=6.7e-10 Score=114.46 Aligned_cols=167 Identities=14% Similarity=0.130 Sum_probs=109.4
Q ss_pred CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCC---------CCcCCC----c--cc-
Q 040989 428 SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSA---------GRCWTL----G--EE- 491 (700)
Q Consensus 428 ~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~---------g~~w~~----~--~e- 491 (700)
.++++||++||+++++.++. .++..+.+.++.+..++++ +++|.. . ..
T Consensus 14 ~~~~~vIlLHG~G~~~~~~~----------------~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~ 77 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAMG----------------EIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQ 77 (232)
T ss_pred CCCcEEEEEeCCCCChHHHH----------------HHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchH
Confidence 45889999999999987753 3566677766544444433 244531 1 11
Q ss_pred ------HHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEEEEEecCCCCCCC-CCCCCCCeEEEc
Q 040989 492 ------RLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIALMIAEGLFDQMD-IPEDYPPTLFVH 562 (700)
Q Consensus 492 ------~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv~~I~~G~~~~~~-~~~~yPP~lf~h 562 (700)
...+.+.++++.++.+++..+++++|+|+||++++.++.+.+ +++++ ..+|.+.... ....-+|++++|
T Consensus 78 ~~~~~~~~~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv--~~sg~~~~~~~~~~~~~pvli~h 155 (232)
T PRK11460 78 ARVAAIMPTFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVI--AFSGRYASLPETAPTATTIHLIH 155 (232)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEE--EeccccccccccccCCCcEEEEe
Confidence 123344556666777888889999999999999999997754 33333 3455543221 123456999999
Q ss_pred cCCChhH-HHHHHHHHHHHHhCCCeeeEEEecCCcCCccccccCCCCCCHHHHHHHHHHHH
Q 040989 563 MPKDSYR-QRKIGEFLVVLRNKGIDVAEIECMEFPLSRNFFTDRIPGLEQANSTKLFELFQ 622 (700)
Q Consensus 563 m~~D~~~-~~~i~~~~~~L~~~gvp~~~i~~~~~~v~p~~f~~rdp~I~~~~S~~l~~al~ 622 (700)
+..|+.. .+...+..+.|++.|.++....... ..=.|+.+.-+.+.+-|.
T Consensus 156 G~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~----------~gH~i~~~~~~~~~~~l~ 206 (232)
T PRK11460 156 GGEDPVIDVAHAVAAQEALISLGGDVTLDIVED----------LGHAIDPRLMQFALDRLR 206 (232)
T ss_pred cCCCCccCHHHHHHHHHHHHHCCCCeEEEEECC----------CCCCCCHHHHHHHHHHHH
Confidence 9999874 5667778888999998887776521 222355565565555553
No 15
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.18 E-value=5.1e-10 Score=131.10 Aligned_cols=110 Identities=18% Similarity=0.266 Sum_probs=79.1
Q ss_pred eccCCeEEEEee--cCC--C-c--eEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCC-c
Q 040989 414 ELRNGTDVIWQI--PDS--P-K--AVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGR-C 485 (700)
Q Consensus 414 ~~~~G~~l~~~~--P~~--p-r--~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~-~ 485 (700)
+..+|.++..++ |.+ | + |+||++||+-.....+ .. ....+.++.+||+|+++++||. .
T Consensus 371 ~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~-~~-------------~~~~q~~~~~G~~V~~~n~RGS~G 436 (620)
T COG1506 371 KSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGY-SF-------------NPEIQVLASAGYAVLAPNYRGSTG 436 (620)
T ss_pred EcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCcccccc-cc-------------chhhHHHhcCCeEEEEeCCCCCCc
Confidence 567888884433 763 3 2 8999999994332221 11 1256889999999999999972 2
Q ss_pred C--CC---------cccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC-cCeE
Q 040989 486 W--TL---------GEERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR-FSSI 537 (700)
Q Consensus 486 w--~~---------~~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~-~~gl 537 (700)
+ .| ..+..|+.++++++.+.--+++.++.++|+|.||+|+++.+.+.+ |.+.
T Consensus 437 yG~~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~~f~a~ 500 (620)
T COG1506 437 YGREFADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTPRFKAA 500 (620)
T ss_pred cHHHHHHhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCchhheE
Confidence 1 11 356789999999554544457799999999999999999999876 5554
No 16
>PRK10749 lysophospholipase L2; Provisional
Probab=99.16 E-value=7.5e-10 Score=119.55 Aligned_cols=108 Identities=15% Similarity=0.138 Sum_probs=79.6
Q ss_pred eeccCCeEEEEee--cCCCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCc-
Q 040989 413 VELRNGTDVIWQI--PDSPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLG- 489 (700)
Q Consensus 413 ~~~~~G~~l~~~~--P~~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~- 489 (700)
....+|.+++|.. |..++++||++||.+++...|+ .++..++++||.|+++|.+|++.+..
T Consensus 35 ~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~----------------~~~~~l~~~g~~v~~~D~~G~G~S~~~ 98 (330)
T PRK10749 35 FTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVKYA----------------ELAYDLFHLGYDVLIIDHRGQGRSGRL 98 (330)
T ss_pred EEcCCCCEEEEEEccCCCCCcEEEEECCccchHHHHH----------------HHHHHHHHCCCeEEEEcCCCCCCCCCC
Confidence 3457888898875 4467889999999988765443 36777889999999999999776521
Q ss_pred ---------cc----HHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 490 ---------EE----RLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 490 ---------~e----~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
.. ..++.++++.+.... +..|++++||||||.+++.++.+.| +++++
T Consensus 99 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lv 160 (330)
T PRK10749 99 LDDPHRGHVERFNDYVDDLAAFWQQEIQPG--PYRKRYALAHSMGGAILTLFLQRHPGVFDAIA 160 (330)
T ss_pred CCCCCcCccccHHHHHHHHHHHHHHHHhcC--CCCCeEEEEEcHHHHHHHHHHHhCCCCcceEE
Confidence 11 245555555544433 4579999999999999999998764 56765
No 17
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.16 E-value=1.3e-10 Score=126.00 Aligned_cols=117 Identities=15% Similarity=0.146 Sum_probs=75.7
Q ss_pred ccCCeEEEEee--cCCCceEEEEeccCCCCCC-ccccC-----CC-----CCCCCCCCchHHHHHHHHHHCCcEEEEEcC
Q 040989 415 LRNGTDVIWQI--PDSPKAVLFLAHGCNGRAV-HFWDR-----SP-----NCPNCIGLPEERLLVLHALSRGFAIITISS 481 (700)
Q Consensus 415 ~~~G~~l~~~~--P~~pr~vvv~lHG~~~~~~-~~~~~-----s~-----~c~~c~glpe~~~~~~~~~~~GyaV~avd~ 481 (700)
+.+|.+++++. |.+|||+|+++||.+++.. +|... +. .|+.=.--. .-.++..|.++||.|+++|.
T Consensus 4 ~~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y-~~~~~~~l~~~G~~V~~~D~ 82 (332)
T TIGR01607 4 NKDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIY-KDSWIENFNKNGYSVYGLDL 82 (332)
T ss_pred CCCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEe-eHHHHHHHHHCCCcEEEecc
Confidence 45788885553 6689999999999988875 22100 00 000000000 01368899999999999999
Q ss_pred CCCcCCC------------cccHHHHHHHHHHHHHHc-----------------CCC-CCCEEEEecChhHHHHHHHhhc
Q 040989 482 AGRCWTL------------GEERLVVREIIRWWVERH-----------------KLE-KLPLVALGASSGGYFVSALAKG 531 (700)
Q Consensus 482 ~g~~w~~------------~~e~~~v~a~l~~~~~~~-----------------~l~-~~pl~l~G~S~GG~~a~~la~~ 531 (700)
+||+-+- ..-+.|+.++++.+.++. ..+ ++|+|++||||||.+++.++..
T Consensus 83 rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~ 162 (332)
T TIGR01607 83 QGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLEL 162 (332)
T ss_pred cccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHH
Confidence 9865432 112356666666655420 123 7899999999999999998864
Q ss_pred c
Q 040989 532 L 532 (700)
Q Consensus 532 ~ 532 (700)
+
T Consensus 163 ~ 163 (332)
T TIGR01607 163 L 163 (332)
T ss_pred h
Confidence 3
No 18
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.13 E-value=1.6e-09 Score=114.11 Aligned_cols=159 Identities=18% Similarity=0.192 Sum_probs=101.9
Q ss_pred EEEEeecC----CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcC--CC-------CcC
Q 040989 420 DVIWQIPD----SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISS--AG-------RCW 486 (700)
Q Consensus 420 ~l~~~~P~----~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~--~g-------~~w 486 (700)
++..++|+ .+.|+|+++||++.+...+... ..+...+.+.||.|+++|. +| .+|
T Consensus 28 ~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~-------------~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w 94 (275)
T TIGR02821 28 TFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIK-------------AGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAW 94 (275)
T ss_pred EEEEEcCCCccCCCCCEEEEccCCCCCccHHHhh-------------hHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccc
Confidence 35556674 3579999999999887654221 1123445567999999997 32 244
Q ss_pred CCc------------------ccHHH-HHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEEEEEecCC
Q 040989 487 TLG------------------EERLV-VREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIALMIAEGL 545 (700)
Q Consensus 487 ~~~------------------~e~~~-v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv~~I~~G~ 545 (700)
..+ ..... ++.+...+.+.++++..+++++|+||||++|+.++.+.| |++++.+ ++.
T Consensus 95 ~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~--~~~ 172 (275)
T TIGR02821 95 DFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAF--API 172 (275)
T ss_pred cccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEE--CCc
Confidence 321 01122 233333344556788889999999999999999999875 5555421 111
Q ss_pred C----------------CC--C-----C---C---CCCCCCeEEEccCCChhHH--HHHHHHHHHHHhCCCeeeEEEec
Q 040989 546 F----------------DQ--M-----D---I---PEDYPPTLFVHMPKDSYRQ--RKIGEFLVVLRNKGIDVAEIECM 593 (700)
Q Consensus 546 ~----------------~~--~-----~---~---~~~yPP~lf~hm~~D~~~~--~~i~~~~~~L~~~gvp~~~i~~~ 593 (700)
+ .. . + + ....||+++.|+..|+... .+.....+.|++.|+++.....+
T Consensus 173 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~ 251 (275)
T TIGR02821 173 VAPSRCPWGQKAFSAYLGADEAAWRSYDASLLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQA 251 (275)
T ss_pred cCcccCcchHHHHHHHhcccccchhhcchHHHHhhcccCCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeC
Confidence 0 00 0 0 0 1235788888999997643 35667788899999998887653
No 19
>PRK10162 acetyl esterase; Provisional
Probab=99.12 E-value=2.3e-09 Score=115.55 Aligned_cols=161 Identities=14% Similarity=0.086 Sum_probs=111.0
Q ss_pred eEEEEeecC-CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHH-CCcEEEEEcCCCC-cCCCcccHHHH
Q 040989 419 TDVIWQIPD-SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALS-RGFAIITISSAGR-CWTLGEERLVV 495 (700)
Q Consensus 419 ~~l~~~~P~-~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~-~GyaV~avd~~g~-~w~~~~e~~~v 495 (700)
..+.++.|. .+.++||++||+|...++... ...++..+.+ .|+.|+.+|||.. -..++.-..|+
T Consensus 69 i~~~~y~P~~~~~p~vv~~HGGg~~~g~~~~-------------~~~~~~~la~~~g~~Vv~vdYrlape~~~p~~~~D~ 135 (318)
T PRK10162 69 VETRLYYPQPDSQATLFYLHGGGFILGNLDT-------------HDRIMRLLASYSGCTVIGIDYTLSPEARFPQAIEEI 135 (318)
T ss_pred eEEEEECCCCCCCCEEEEEeCCcccCCCchh-------------hhHHHHHHHHHcCCEEEEecCCCCCCCCCCCcHHHH
Confidence 455556675 347899999999866443211 1224555555 6999999999852 22345667888
Q ss_pred HHHHHHHHH---HcCCCCCCEEEEecChhHHHHHHHhhcc--------CcCeEEEEE--ec------------C--CCC-
Q 040989 496 REIIRWWVE---RHKLEKLPLVALGASSGGYFVSALAKGL--------RFSSIALMI--AE------------G--LFD- 547 (700)
Q Consensus 496 ~a~l~~~~~---~~~l~~~pl~l~G~S~GG~~a~~la~~~--------~~~glv~~I--~~------------G--~~~- 547 (700)
.++++|+.+ +++++..+++++|+|+||.+|+.++... .+++++++. .. + .+.
T Consensus 136 ~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s~~~~~~~~~~l~~ 215 (318)
T PRK10162 136 VAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVSRRLLGGVWDGLTQ 215 (318)
T ss_pred HHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCChhHHHhCCCccccCH
Confidence 889888864 5688888999999999999999998742 345544321 00 0 000
Q ss_pred ----------------CC---------CCCCCCCCeEEEccCCChhHHHHHHHHHHHHHhCCCeeeEEEec
Q 040989 548 ----------------QM---------DIPEDYPPTLFVHMPKDSYRQRKIGEFLVVLRNKGIDVAEIECM 593 (700)
Q Consensus 548 ----------------~~---------~~~~~yPP~lf~hm~~D~~~~~~i~~~~~~L~~~gvp~~~i~~~ 593 (700)
.. ++....||++++++..|+.. .+.....+.|++.|++++.++.+
T Consensus 216 ~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~-de~~~~~~~L~~aGv~v~~~~~~ 285 (318)
T PRK10162 216 QDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPLL-DDSRLLYQTLAAHQQPCEFKLYP 285 (318)
T ss_pred HHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcCc-ChHHHHHHHHHHcCCCEEEEEEC
Confidence 00 00145799999999999875 35667888999999999988775
No 20
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.10 E-value=8.4e-10 Score=123.31 Aligned_cols=179 Identities=13% Similarity=0.183 Sum_probs=108.1
Q ss_pred cCCeEE--EEeecC--CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCc--
Q 040989 416 RNGTDV--IWQIPD--SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLG-- 489 (700)
Q Consensus 416 ~~G~~l--~~~~P~--~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~-- 489 (700)
.+|.++ ++..|. .|+|+||++||.+....++|. .++..|+++||+|+++|.+|.+.+..
T Consensus 176 ~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~---------------~~~~~La~~Gy~vl~~D~pG~G~s~~~~ 240 (414)
T PRK05077 176 PGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYR---------------LFRDYLAPRGIAMLTIDMPSVGFSSKWK 240 (414)
T ss_pred CCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHH---------------HHHHHHHhCCCEEEEECCCCCCCCCCCC
Confidence 355355 455675 568999988887765444442 26778999999999999998654421
Q ss_pred --ccH-HHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhcc--CcCeEEEEEecCCCCCC----CCCCCCCCeE-
Q 040989 490 --EER-LVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGL--RFSSIALMIAEGLFDQM----DIPEDYPPTL- 559 (700)
Q Consensus 490 --~e~-~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~--~~~glv~~I~~G~~~~~----~~~~~yPP~l- 559 (700)
.+. ....++++++.+...++..++.++|+|+||++|+.+|... ++++++. ..+.++.. ......|...
T Consensus 241 ~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~--~~~~~~~~~~~~~~~~~~p~~~~ 318 (414)
T PRK05077 241 LTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVAC--LGPVVHTLLTDPKRQQQVPEMYL 318 (414)
T ss_pred ccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEE--ECCccchhhcchhhhhhchHHHH
Confidence 232 2335677777766566788999999999999999999865 4677552 22222211 1111122110
Q ss_pred --E---EccC-CChhHH-HHHHHH----HHHH-HhCCCeeeEEEecCCcCCccccccCCCCCCHHHHHHHHHHHH
Q 040989 560 --F---VHMP-KDSYRQ-RKIGEF----LVVL-RNKGIDVAEIECMEFPLSRNFFTDRIPGLEQANSTKLFELFQ 622 (700)
Q Consensus 560 --f---~hm~-~D~~~~-~~i~~~----~~~L-~~~gvp~~~i~~~~~~v~p~~f~~rdp~I~~~~S~~l~~al~ 622 (700)
+ +.++ .|.... ..+... ...+ ++..+|+..++. .+|+.++.+.++.|.++..
T Consensus 319 ~~la~~lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G-----------~~D~ivP~~~a~~l~~~~~ 382 (414)
T PRK05077 319 DVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYW-----------KNDPFSPEEDSRLIASSSA 382 (414)
T ss_pred HHHHHHhCCCCCChHHHHHHhhhccchhhhhhccCCCCcEEEEec-----------CCCCCCCHHHHHHHHHhCC
Confidence 0 0111 121111 111100 1111 345677777766 7899999999998877765
No 21
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.08 E-value=3.7e-09 Score=117.49 Aligned_cols=187 Identities=12% Similarity=0.114 Sum_probs=116.2
Q ss_pred cCCeEEEEee--cC--CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCC---
Q 040989 416 RNGTDVIWQI--PD--SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTL--- 488 (700)
Q Consensus 416 ~~G~~l~~~~--P~--~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~--- 488 (700)
.+|..++++. |. .++++|||+||.+++...| ..++..|.++||.|+++|++|++-+.
T Consensus 118 ~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~----------------~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~ 181 (395)
T PLN02652 118 ARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRY----------------LHFAKQLTSCGFGVYAMDWIGHGGSDGLH 181 (395)
T ss_pred CCCCEEEEEEecCCCCCCceEEEEECCchHHHHHH----------------HHHHHHHHHCCCEEEEeCCCCCCCCCCCC
Confidence 4555666554 53 5689999999998875432 23678888999999999999865432
Q ss_pred ------cccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhcc----CcCeEEEEEecCCCCCCC--------
Q 040989 489 ------GEERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGL----RFSSIALMIAEGLFDQMD-------- 550 (700)
Q Consensus 489 ------~~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~----~~~glv~~I~~G~~~~~~-------- 550 (700)
.....|+.++++.+..++ ++.|++++||||||.+++.++... .+.+++ +.+++-...
T Consensus 182 ~~~~~~~~~~~Dl~~~l~~l~~~~--~~~~i~lvGhSmGG~ial~~a~~p~~~~~v~glV---L~sP~l~~~~~~~~~~~ 256 (395)
T PLN02652 182 GYVPSLDYVVEDTEAFLEKIRSEN--PGVPCFLFGHSTGGAVVLKAASYPSIEDKLEGIV---LTSPALRVKPAHPIVGA 256 (395)
T ss_pred CCCcCHHHHHHHHHHHHHHHHHhC--CCCCEEEEEECHHHHHHHHHHhccCcccccceEE---EECcccccccchHHHHH
Confidence 122467888888887765 467999999999999999887542 245544 223221100
Q ss_pred -------C-C-CCCCCe--EEEccCCChhH-------------------HHHHHH----HHHHHHhCCCeeeEEEecCCc
Q 040989 551 -------I-P-EDYPPT--LFVHMPKDSYR-------------------QRKIGE----FLVVLRNKGIDVAEIECMEFP 596 (700)
Q Consensus 551 -------~-~-~~yPP~--lf~hm~~D~~~-------------------~~~i~~----~~~~L~~~gvp~~~i~~~~~~ 596 (700)
. + ..+++. ....+.+|+.. ...+.+ ....|.+..+|+..++.
T Consensus 257 ~~~l~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G---- 332 (395)
T PLN02652 257 VAPIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHG---- 332 (395)
T ss_pred HHHHHHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEe----
Confidence 0 0 001100 00011111110 000111 12345667899999988
Q ss_pred CCccccccCCCCCCHHHHHHHHHHHH----HcccccCCCCcc
Q 040989 597 LSRNFFTDRIPGLEQANSTKLFELFQ----EKGFIDENGYMR 634 (700)
Q Consensus 597 v~p~~f~~rdp~I~~~~S~~l~~al~----~~g~ld~~g~l~ 634 (700)
..|..++.+.++.+++.+. +.-++++.++..
T Consensus 333 -------~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l 367 (395)
T PLN02652 333 -------TADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDL 367 (395)
T ss_pred -------CCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEe
Confidence 6899999999999999864 355667655543
No 22
>PLN02442 S-formylglutathione hydrolase
Probab=98.96 E-value=1.2e-08 Score=108.20 Aligned_cols=159 Identities=16% Similarity=0.189 Sum_probs=97.1
Q ss_pred eEEEEeecC----CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCC---------Cc
Q 040989 419 TDVIWQIPD----SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAG---------RC 485 (700)
Q Consensus 419 ~~l~~~~P~----~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g---------~~ 485 (700)
.++..++|+ .+.|+|+++||+.++..++... ..+.+.+...||+|+.+|..+ .+
T Consensus 32 ~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~-------------~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~ 98 (283)
T PLN02442 32 MTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQK-------------SGAQRAAAARGIALVAPDTSPRGLNVEGEADS 98 (283)
T ss_pred eEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHh-------------hhHHHHHhhcCeEEEecCCCCCCCCCCCCccc
Confidence 445555675 3579999999998876554221 124456678899999999632 23
Q ss_pred CCCc-----------------ccHH-HHHHHHHHHHHHc-CCCCCCEEEEecChhHHHHHHHhhccC--cCeEEEEEecC
Q 040989 486 WTLG-----------------EERL-VVREIIRWWVERH-KLEKLPLVALGASSGGYFVSALAKGLR--FSSIALMIAEG 544 (700)
Q Consensus 486 w~~~-----------------~e~~-~v~a~l~~~~~~~-~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv~~I~~G 544 (700)
|.+. .... ..+.+.+++.+.+ .++..+++++|+||||++|+.++.++| |++++. .+|
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~--~~~ 176 (283)
T PLN02442 99 WDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSA--FAP 176 (283)
T ss_pred cccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEE--ECC
Confidence 3211 0011 1222322333322 346778999999999999999999876 665442 122
Q ss_pred CCCC----------------C-------C-------CCCCCCCeEEEccCCChhHHH--HHHHHHHHHHhCCCeeeEEEe
Q 040989 545 LFDQ----------------M-------D-------IPEDYPPTLFVHMPKDSYRQR--KIGEFLVVLRNKGIDVAEIEC 592 (700)
Q Consensus 545 ~~~~----------------~-------~-------~~~~yPP~lf~hm~~D~~~~~--~i~~~~~~L~~~gvp~~~i~~ 592 (700)
.+.. . + +...-+|++++||.+|..... +.....+.|++.|.++.....
T Consensus 177 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~ 256 (283)
T PLN02442 177 IANPINCPWGQKAFTNYLGSDKADWEEYDATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQ 256 (283)
T ss_pred ccCcccCchhhHHHHHHcCCChhhHHHcChhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEe
Confidence 2110 0 0 112346888899998866432 245567788888988766654
No 23
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.91 E-value=1.3e-08 Score=101.94 Aligned_cols=146 Identities=21% Similarity=0.227 Sum_probs=100.8
Q ss_pred EEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHH-HCCcEEEEEcCCC-CcCCCcccHHHHHHHHHHHHHH---cC
Q 040989 433 LFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHAL-SRGFAIITISSAG-RCWTLGEERLVVREIIRWWVER---HK 507 (700)
Q Consensus 433 vv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~-~~GyaV~avd~~g-~~w~~~~e~~~v~a~l~~~~~~---~~ 507 (700)
||++||++...++-.. ...+++.++ ++||.|+.++||- --..++....|+.++++|+.+. ++
T Consensus 1 v~~~HGGg~~~g~~~~-------------~~~~~~~la~~~g~~v~~~~Yrl~p~~~~p~~~~D~~~a~~~l~~~~~~~~ 67 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKES-------------HWPFAARLAAERGFVVVSIDYRLAPEAPFPAALEDVKAAYRWLLKNADKLG 67 (211)
T ss_dssp EEEE--STTTSCGTTT-------------HHHHHHHHHHHHTSEEEEEE---TTTSSTTHHHHHHHHHHHHHHHTHHHHT
T ss_pred CEEECCcccccCChHH-------------HHHHHHHHHhhccEEEEEeeccccccccccccccccccceeeecccccccc
Confidence 7999999988654311 123555555 4999999999984 2334577789999999999876 57
Q ss_pred CCCCCEEEEecChhHHHHHHHhhcc------CcCeEEEEEecC--------------------CCCC-------------
Q 040989 508 LEKLPLVALGASSGGYFVSALAKGL------RFSSIALMIAEG--------------------LFDQ------------- 548 (700)
Q Consensus 508 l~~~pl~l~G~S~GG~~a~~la~~~------~~~glv~~I~~G--------------------~~~~------------- 548 (700)
++..+++++|.|+||.+++.++.+. ++.+++. ++.. .+-.
T Consensus 68 ~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~-~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (211)
T PF07859_consen 68 IDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIIL-ISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWFWKLYLP 146 (211)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEE-ESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHHHHHHHS
T ss_pred ccccceEEeecccccchhhhhhhhhhhhcccchhhhhc-ccccccchhcccccccccccccccccccccccccccccccc
Confidence 7889999999999999999999753 2444432 2110 0100
Q ss_pred ---C-----C-----CCCCCCCeEEEccCCChhHHHHHHHHHHHHHhCCCeeeEEEec
Q 040989 549 ---M-----D-----IPEDYPPTLFVHMPKDSYRQRKIGEFLVVLRNKGIDVAEIECM 593 (700)
Q Consensus 549 ---~-----~-----~~~~yPP~lf~hm~~D~~~~~~i~~~~~~L~~~gvp~~~i~~~ 593 (700)
. . ....+||++++++..|... .+.....++|++.|++++.+..+
T Consensus 147 ~~~~~~~~~sp~~~~~~~~~Pp~~i~~g~~D~l~-~~~~~~~~~L~~~gv~v~~~~~~ 203 (211)
T PF07859_consen 147 GSDRDDPLASPLNASDLKGLPPTLIIHGEDDVLV-DDSLRFAEKLKKAGVDVELHVYP 203 (211)
T ss_dssp TGGTTSTTTSGGGSSCCTTCHEEEEEEETTSTTH-HHHHHHHHHHHHTT-EEEEEEET
T ss_pred cccccccccccccccccccCCCeeeeccccccch-HHHHHHHHHHHHCCCCEEEEEEC
Confidence 0 0 1235899999999999875 35567889999999999988774
No 24
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.88 E-value=2.3e-08 Score=101.49 Aligned_cols=148 Identities=19% Similarity=0.187 Sum_probs=85.5
Q ss_pred cC-CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHH-HHHHCCcEEEEEcC--------CCC---cCCC----
Q 040989 426 PD-SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVL-HALSRGFAIITISS--------AGR---CWTL---- 488 (700)
Q Consensus 426 P~-~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~-~~~~~GyaV~avd~--------~g~---~w~~---- 488 (700)
|. ..+++||+|||.|.++..+.. ... .+......++.+.. .|. .|.-
T Consensus 9 ~~~~~~~lvi~LHG~G~~~~~~~~----------------~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~ 72 (216)
T PF02230_consen 9 PKGKAKPLVILLHGYGDSEDLFAL----------------LAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDF 72 (216)
T ss_dssp -SST-SEEEEEE--TTS-HHHHHH----------------HHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCS
T ss_pred CCCCCceEEEEECCCCCCcchhHH----------------HHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCC
Confidence 44 348999999999999733211 111 12335667776653 233 5531
Q ss_pred c--c--cH-------HHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhcc--CcCeEEEEEecCCCCCC----CC
Q 040989 489 G--E--ER-------LVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGL--RFSSIALMIAEGLFDQM----DI 551 (700)
Q Consensus 489 ~--~--e~-------~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~--~~~glv~~I~~G~~~~~----~~ 551 (700)
. . +. ..+.++|+...+ .+++..++|++|+|+||+||+.++.+. +++|++ .++|.+... +.
T Consensus 73 ~~~~~~~~~~i~~s~~~l~~li~~~~~-~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv--~lsG~~~~~~~~~~~ 149 (216)
T PF02230_consen 73 DPEGPEDEAGIEESAERLDELIDEEVA-YGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVV--ALSGYLPPESELEDR 149 (216)
T ss_dssp SSSSEB-HHHHHHHHHHHHHHHHHHHH-TT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEE--EES---TTGCCCHCC
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHH-cCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEE--Eeecccccccccccc
Confidence 1 1 12 223334444333 468889999999999999999999986 587865 456665332 11
Q ss_pred --CCCCCCeEEEccCCChhH-HHHHHHHHHHHHhCCCeeeEEEe
Q 040989 552 --PEDYPPTLFVHMPKDSYR-QRKIGEFLVVLRNKGIDVAEIEC 592 (700)
Q Consensus 552 --~~~yPP~lf~hm~~D~~~-~~~i~~~~~~L~~~gvp~~~i~~ 592 (700)
...-.|++++|+..|++. .....+..+.|++.|..+.....
T Consensus 150 ~~~~~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~ 193 (216)
T PF02230_consen 150 PEALAKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEY 193 (216)
T ss_dssp HCCCCTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEE
T ss_pred ccccCCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEc
Confidence 223459999999999874 56777888999999998877765
No 25
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=98.88 E-value=1.3e-08 Score=102.06 Aligned_cols=207 Identities=19% Similarity=0.189 Sum_probs=141.8
Q ss_pred eccCCeEE-EEee-cCCCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCC--CcCCCc
Q 040989 414 ELRNGTDV-IWQI-PDSPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAG--RCWTLG 489 (700)
Q Consensus 414 ~~~~G~~l-~~~~-P~~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g--~~w~~~ 489 (700)
.+.|..++ .|.+ -++.+++|++|||++++.+.+.+ -.--.....+-.|+.+++|| .+-+.+
T Consensus 60 ~T~D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGhr~~---------------i~~~fy~~l~mnv~ivsYRGYG~S~Gsp 124 (300)
T KOG4391|consen 60 RTRDKVTLDAYLMLSESSRPTLLYFHANAGNMGHRLP---------------IARVFYVNLKMNVLIVSYRGYGKSEGSP 124 (300)
T ss_pred EcCcceeEeeeeecccCCCceEEEEccCCCcccchhh---------------HHHHHHHHcCceEEEEEeeccccCCCCc
Confidence 45667777 4444 55779999999999999766532 12345677899999999997 444445
Q ss_pred ccH---HHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhcc--CcCeEEEEEecCCCCCCCCCCCCCCeEEE-cc
Q 040989 490 EER---LVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGL--RFSSIALMIAEGLFDQMDIPEDYPPTLFV-HM 563 (700)
Q Consensus 490 ~e~---~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~--~~~glv~~I~~G~~~~~~~~~~yPP~lf~-hm 563 (700)
+|. -|.+++++++..+.-+++..++++|.|.||++|..+|.+. +.+| .|++..|.++. ..--|++|- -|
T Consensus 125 sE~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~---~ivENTF~SIp--~~~i~~v~p~~~ 199 (300)
T KOG4391|consen 125 SEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISA---IIVENTFLSIP--HMAIPLVFPFPM 199 (300)
T ss_pred cccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheee---eeeechhccch--hhhhheeccchh
Confidence 553 6889999999999999999999999999999999999884 4555 46788887761 111122221 11
Q ss_pred CCChhH-HHHHHHHHHHHHhCCCeeeEEEecCCcCCccccccCCCCCCHHHHHHHHHHHH-----HcccccC--CCCccc
Q 040989 564 PKDSYR-QRKIGEFLVVLRNKGIDVAEIECMEFPLSRNFFTDRIPGLEQANSTKLFELFQ-----EKGFIDE--NGYMRS 635 (700)
Q Consensus 564 ~~D~~~-~~~i~~~~~~L~~~gvp~~~i~~~~~~v~p~~f~~rdp~I~~~~S~~l~~al~-----~~g~ld~--~g~l~~ 635 (700)
..=+.- ...+-.+.+.+.+...|.+.+.. ..|.+||+-+=++||+.-. -.-|-|+ +.-...
T Consensus 200 k~i~~lc~kn~~~S~~ki~~~~~P~LFiSG-----------lkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i~ 268 (300)
T KOG4391|consen 200 KYIPLLCYKNKWLSYRKIGQCRMPFLFISG-----------LKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWIC 268 (300)
T ss_pred hHHHHHHHHhhhcchhhhccccCceEEeec-----------CccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEEe
Confidence 111110 01122345556667778877765 5788999999999998644 2345565 333446
Q ss_pred CCchhHHHHHHHhhcc
Q 040989 636 DGRRTRWKEALRESNA 651 (700)
Q Consensus 636 d~r~~~w~~~l~~~~~ 651 (700)
|+=+....+||.|...
T Consensus 269 dGYfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 269 DGYFQAIEDFLAEVVK 284 (300)
T ss_pred ccHHHHHHHHHHHhcc
Confidence 6666689999988753
No 26
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.88 E-value=1.3e-08 Score=104.97 Aligned_cols=167 Identities=14% Similarity=0.184 Sum_probs=118.1
Q ss_pred cCCCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHH-HHCCcEEEEEcCCCCcCCC--cc---cHHHHHHHH
Q 040989 426 PDSPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHA-LSRGFAIITISSAGRCWTL--GE---ERLVVREII 499 (700)
Q Consensus 426 P~~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~-~~~GyaV~avd~~g~~w~~--~~---e~~~v~a~l 499 (700)
|..+..+|+++||+....+ |...+...+ ...++.|+.+|+.|-+-+. +. ..+|++++.
T Consensus 56 ~~~~~~~lly~hGNa~Dlg----------------q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y~Di~avy 119 (258)
T KOG1552|consen 56 PEAAHPTLLYSHGNAADLG----------------QMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLYADIKAVY 119 (258)
T ss_pred ccccceEEEEcCCcccchH----------------HHHHHHHHHhhcccceEEEEecccccccCCCcccccchhhHHHHH
Confidence 3456799999999944421 112223323 2359999999999854443 32 358999999
Q ss_pred HHHHHHcCCCCCCEEEEecChhHHHHHHHhhccCcCeEEEEEecCCCCCCCCCCCCC-CeEEEccCCChhHHHHHHHHHH
Q 040989 500 RWWVERHKLEKLPLVALGASSGGYFVSALAKGLRFSSIALMIAEGLFDQMDIPEDYP-PTLFVHMPKDSYRQRKIGEFLV 578 (700)
Q Consensus 500 ~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~~~glv~~I~~G~~~~~~~~~~yP-P~lf~hm~~D~~~~~~i~~~~~ 578 (700)
+++++++| ...+++|+|+|+|...++.||.+.|.+|+ |+..+|.+. +..-|| +..-.. -|.+. +++
T Consensus 120 e~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~~~al---VL~SPf~S~-~rv~~~~~~~~~~--~d~f~------~i~ 186 (258)
T KOG1552|consen 120 EWLRNRYG-SPERIILYGQSIGTVPTVDLASRYPLAAV---VLHSPFTSG-MRVAFPDTKTTYC--FDAFP------NIE 186 (258)
T ss_pred HHHHhhcC-CCceEEEEEecCCchhhhhHhhcCCcceE---EEeccchhh-hhhhccCcceEEe--ecccc------ccC
Confidence 99999998 88999999999999999999999997774 466666553 012233 211112 23333 355
Q ss_pred HHHhCCCeeeEEEecCCcCCccccccCCCCCCHHHHHHHHHHHHHc---ccccCCCC
Q 040989 579 VLRNKGIDVAEIECMEFPLSRNFFTDRIPGLEQANSTKLFELFQEK---GFIDENGY 632 (700)
Q Consensus 579 ~L~~~gvp~~~i~~~~~~v~p~~f~~rdp~I~~~~S~~l~~al~~~---g~ld~~g~ 632 (700)
..+....|+.++|. ..|+.|+..++.+||+..+.. .++-+.|.
T Consensus 187 kI~~i~~PVLiiHg-----------tdDevv~~sHg~~Lye~~k~~~epl~v~g~gH 232 (258)
T KOG1552|consen 187 KISKITCPVLIIHG-----------TDDEVVDFSHGKALYERCKEKVEPLWVKGAGH 232 (258)
T ss_pred cceeccCCEEEEec-----------ccCceecccccHHHHHhccccCCCcEEecCCC
Confidence 56667889999988 678999999999999999954 56666554
No 27
>COG1647 Esterase/lipase [General function prediction only]
Probab=98.87 E-value=3.2e-08 Score=99.87 Aligned_cols=176 Identities=15% Similarity=0.098 Sum_probs=115.4
Q ss_pred eEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCC-------ccc-HHHHHHHHHHH
Q 040989 431 AVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTL-------GEE-RLVVREIIRWW 502 (700)
Q Consensus 431 ~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~-------~~e-~~~v~a~l~~~ 502 (700)
-.|+++||..++..|+ .-+.+.|.++||.|+||.++||.-.. +.| ..+|.+..+.+
T Consensus 16 ~AVLllHGFTGt~~Dv----------------r~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L 79 (243)
T COG1647 16 RAVLLLHGFTGTPRDV----------------RMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDL 79 (243)
T ss_pred EEEEEEeccCCCcHHH----------------HHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHH
Confidence 4788899999997664 34788999999999999999976542 233 37788888888
Q ss_pred HHHcCCCCCCEEEEecChhHHHHHHHhhccCcCeEEEEEecCCCCCCCCCCCCCCeEE--Ecc----CCChh--------
Q 040989 503 VERHKLEKLPLVALGASSGGYFVSALAKGLRFSSIALMIAEGLFDQMDIPEDYPPTLF--VHM----PKDSY-------- 568 (700)
Q Consensus 503 ~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~~~glv~~I~~G~~~~~~~~~~yPP~lf--~hm----~~D~~-------- 568 (700)
.++ | -..|++.|.||||-||+.||.++|+.+++.|.+ +++..+-...+-|.+- -.+ .+|..
T Consensus 80 ~~~-g--y~eI~v~GlSmGGv~alkla~~~p~K~iv~m~a--~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~ 154 (243)
T COG1647 80 KEA-G--YDEIAVVGLSMGGVFALKLAYHYPPKKIVPMCA--PVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMKS 154 (243)
T ss_pred HHc-C--CCeEEEEeecchhHHHHHHHhhCCccceeeecC--CcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHHHH
Confidence 854 2 358999999999999999999999999875432 2221100000000000 000 01110
Q ss_pred ----HHHHHHHH-------HHHHHhCCCeeeEEEecCCcCCccccccCCCCCCHHHHHHHHHHHH----HcccccCCCCc
Q 040989 569 ----RQRKIGEF-------LVVLRNKGIDVAEIECMEFPLSRNFFTDRIPGLEQANSTKLFELFQ----EKGFIDENGYM 633 (700)
Q Consensus 569 ----~~~~i~~~-------~~~L~~~gvp~~~i~~~~~~v~p~~f~~rdp~I~~~~S~~l~~al~----~~g~ld~~g~l 633 (700)
...++.+. ...|-..-+|+..++. .+|+.|+.+-+.-||+... ++.++.+.|.+
T Consensus 155 ~~~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~-----------~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHV 223 (243)
T COG1647 155 YKDTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQG-----------RQDEMVPAESANFIYDHVESDDKELKWLEGSGHV 223 (243)
T ss_pred hhcchHHHHHHHHHHHHHHHhhhhhcccchhheec-----------ccCCCCCHHHHHHHHHhccCCcceeEEEccCCce
Confidence 01122222 2223334555555544 7899999999999999987 77888888987
Q ss_pred ccCCc
Q 040989 634 RSDGR 638 (700)
Q Consensus 634 ~~d~r 638 (700)
..+..
T Consensus 224 It~D~ 228 (243)
T COG1647 224 ITLDK 228 (243)
T ss_pred eecch
Confidence 65443
No 28
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=98.85 E-value=1.3e-07 Score=97.25 Aligned_cols=109 Identities=17% Similarity=0.092 Sum_probs=74.8
Q ss_pred cceeccCCeEEEEeecCC-CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCc
Q 040989 411 PTVELRNGTDVIWQIPDS-PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLG 489 (700)
Q Consensus 411 p~~~~~~G~~l~~~~P~~-pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~ 489 (700)
+.....+|.+++|+.... ..++||++||.+++...| . .+.. .+.++|.|+++|++|++.+..
T Consensus 8 ~~~~~~~~~~~~~~~~g~~~~~~vv~~hG~~~~~~~~-~---------------~~~~-~l~~~~~vi~~D~~G~G~S~~ 70 (278)
T TIGR03056 8 SRRVTVGPFHWHVQDMGPTAGPLLLLLHGTGASTHSW-R---------------DLMP-PLARSFRVVAPDLPGHGFTRA 70 (278)
T ss_pred cceeeECCEEEEEEecCCCCCCeEEEEcCCCCCHHHH-H---------------HHHH-HHhhCcEEEeecCCCCCCCCC
Confidence 344567888988876432 357899999998876443 2 1333 445689999999998766531
Q ss_pred -----ccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 490 -----EERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 490 -----~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
....+..+.+..++++.+ ..|++++|+||||.+++.+|.+.| +.+++
T Consensus 71 ~~~~~~~~~~~~~~l~~~i~~~~--~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v 124 (278)
T TIGR03056 71 PFRFRFTLPSMAEDLSALCAAEG--LSPDGVIGHSAGAAIALRLALDGPVTPRMVV 124 (278)
T ss_pred ccccCCCHHHHHHHHHHHHHHcC--CCCceEEEECccHHHHHHHHHhCCcccceEE
Confidence 123444444555555554 358899999999999999998875 34444
No 29
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.85 E-value=9.8e-08 Score=102.17 Aligned_cols=162 Identities=19% Similarity=0.201 Sum_probs=115.5
Q ss_pred eEEEEeec--CC--CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCC-CcCCCcccHH
Q 040989 419 TDVIWQIP--DS--PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAG-RCWTLGEERL 493 (700)
Q Consensus 419 ~~l~~~~P--~~--pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g-~~w~~~~e~~ 493 (700)
..+.++.| .. +.++||++||++...++... +.......+...|+.|+.+|||- --..++....
T Consensus 64 ~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~------------~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p~~~~ 131 (312)
T COG0657 64 VPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRT------------HDALVARLAAAAGAVVVSVDYRLAPEHPFPAALE 131 (312)
T ss_pred eeEEEECCCCCCCCCCcEEEEEeCCeeeecChhh------------hHHHHHHHHHHcCCEEEecCCCCCCCCCCCchHH
Confidence 44555556 22 47999999999988654321 12346778889999999999984 2336678888
Q ss_pred HHHHHHHHHHHH---cCCCCCCEEEEecChhHHHHHHHhhccC------cCeEEEEEe---cCCC--------------C
Q 040989 494 VVREIIRWWVER---HKLEKLPLVALGASSGGYFVSALAKGLR------FSSIALMIA---EGLF--------------D 547 (700)
Q Consensus 494 ~v~a~l~~~~~~---~~l~~~pl~l~G~S~GG~~a~~la~~~~------~~glv~~I~---~G~~--------------~ 547 (700)
|+.++++|+.++ ++++..+|+++|+|+||.+++.++...+ ..+.+ +|. +... .
T Consensus 132 d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~-li~P~~d~~~~~~~~~~~~~~~~~~ 210 (312)
T COG0657 132 DAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQV-LISPLLDLTSSAASLPGYGEADLLD 210 (312)
T ss_pred HHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEE-EEecccCCcccccchhhcCCccccC
Confidence 999999999755 6889999999999999999999987642 22222 121 1010 0
Q ss_pred C------------------CC-----C----CCCCCCeEEEccCCChhHHHHHHHHHHHHHhCCCeeeEEEecC
Q 040989 548 Q------------------MD-----I----PEDYPPTLFVHMPKDSYRQRKIGEFLVVLRNKGIDVAEIECME 594 (700)
Q Consensus 548 ~------------------~~-----~----~~~yPP~lf~hm~~D~~~~~~i~~~~~~L~~~gvp~~~i~~~~ 594 (700)
. .+ + ....||++++++..|+... ......+.|++.|++++.+..+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~p~~spl~~~~~~~lPP~~i~~a~~D~l~~-~~~~~a~~L~~agv~~~~~~~~g 283 (312)
T COG0657 211 AAAILAWFADLYLGAAPDREDPEASPLASDDLSGLPPTLIQTAEFDPLRD-EGEAYAERLRAAGVPVELRVYPG 283 (312)
T ss_pred HHHHHHHHHHHhCcCccccCCCccCccccccccCCCCEEEEecCCCcchh-HHHHHHHHHHHcCCeEEEEEeCC
Confidence 0 00 0 1227999999999998875 56667889999999997777653
No 30
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=98.84 E-value=1.6e-07 Score=97.52 Aligned_cols=105 Identities=14% Similarity=0.119 Sum_probs=70.2
Q ss_pred CeEEEEeecCCCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCcc---cH--
Q 040989 418 GTDVIWQIPDSPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLGE---ER-- 492 (700)
Q Consensus 418 G~~l~~~~P~~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~~---e~-- 492 (700)
|.+++|....+ .+.||++||.+.+...+... ...+..+++.||.|+++|.+|++++... ..
T Consensus 19 ~~~~~y~~~g~-~~~ivllHG~~~~~~~~~~~-------------~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 84 (282)
T TIGR03343 19 NFRIHYNEAGN-GEAVIMLHGGGPGAGGWSNY-------------YRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRG 84 (282)
T ss_pred ceeEEEEecCC-CCeEEEECCCCCchhhHHHH-------------HHHHHHHHhCCCEEEEECCCCCCCCCCCcCccccc
Confidence 45677776433 35689999987765433110 1234567788999999999998876421 10
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 493 LVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 493 ~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
....+.+..+.+..+ -.+++++|+||||.+++.+|.++| +.+++
T Consensus 85 ~~~~~~l~~~l~~l~--~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lv 130 (282)
T TIGR03343 85 LVNARAVKGLMDALD--IEKAHLVGNSMGGATALNFALEYPDRIGKLI 130 (282)
T ss_pred chhHHHHHHHHHHcC--CCCeeEEEECchHHHHHHHHHhChHhhceEE
Confidence 111233344555553 458999999999999999999874 66655
No 31
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.83 E-value=7e-09 Score=104.45 Aligned_cols=148 Identities=16% Similarity=0.179 Sum_probs=94.3
Q ss_pred HHHHHHHCCcEEEEEcCCCCc-----CC------C-cccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhcc
Q 040989 465 LVLHALSRGFAIITISSAGRC-----WT------L-GEERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGL 532 (700)
Q Consensus 465 ~~~~~~~~GyaV~avd~~g~~-----w~------~-~~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~ 532 (700)
..+.|+++||+|+.+++||.. |. + ..+..|+.+++++++++..++..+++++|+|+||++|+.++.+.
T Consensus 6 ~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~ 85 (213)
T PF00326_consen 6 NAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQH 85 (213)
T ss_dssp HHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHT
T ss_pred HHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhccc
Confidence 356678999999999999733 11 1 34578999999999999888999999999999999999999954
Q ss_pred --CcCeEEEEEecCCCCCCCCC-CC--CCC-eEEEccCC--ChhHHHHHHHHHHHHHh--CCCeeeEEEecCCcCCcccc
Q 040989 533 --RFSSIALMIAEGLFDQMDIP-ED--YPP-TLFVHMPK--DSYRQRKIGEFLVVLRN--KGIDVAEIECMEFPLSRNFF 602 (700)
Q Consensus 533 --~~~glv~~I~~G~~~~~~~~-~~--yPP-~lf~hm~~--D~~~~~~i~~~~~~L~~--~gvp~~~i~~~~~~v~p~~f 602 (700)
.|.+++ ...|.++..... .. |+. -....+.. ++... .-...+..+.+ ...|+..++.
T Consensus 86 ~~~f~a~v--~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~P~li~hG---------- 152 (213)
T PF00326_consen 86 PDRFKAAV--AGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFY-RELSPISPADNVQIKPPVLIIHG---------- 152 (213)
T ss_dssp CCGSSEEE--EESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHH-HHHHHGGGGGGCGGGSEEEEEEE----------
T ss_pred ceeeeeee--ccceecchhcccccccccccccccccCccchhhhhh-hhhccccccccccCCCCEEEEcc----------
Confidence 366644 223332221100 00 111 01001111 11110 11112333444 6788888887
Q ss_pred ccCCCCCCHHHHHHHHHHHHHccc
Q 040989 603 TDRIPGLEQANSTKLFELFQEKGF 626 (700)
Q Consensus 603 ~~rdp~I~~~~S~~l~~al~~~g~ 626 (700)
..|+.|+..+|.+++++|++.|.
T Consensus 153 -~~D~~Vp~~~s~~~~~~L~~~g~ 175 (213)
T PF00326_consen 153 -ENDPRVPPSQSLRLYNALRKAGK 175 (213)
T ss_dssp -TTBSSSTTHHHHHHHHHHHHTTS
T ss_pred -CCCCccCHHHHHHHHHHHHhcCC
Confidence 68899999999999999997653
No 32
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=98.82 E-value=3.5e-08 Score=104.10 Aligned_cols=107 Identities=17% Similarity=0.208 Sum_probs=73.7
Q ss_pred CCeEEE-EeecC--CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCC-----
Q 040989 417 NGTDVI-WQIPD--SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTL----- 488 (700)
Q Consensus 417 ~G~~l~-~~~P~--~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~----- 488 (700)
.|..+. |+.|. .|+++|||+||.++...++... -..+++.|.++||.|+++|++|++-+.
T Consensus 9 ~g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~------------~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~ 76 (266)
T TIGR03101 9 HGFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRM------------VALQARAFAAGGFGVLQIDLYGCGDSAGDFAA 76 (266)
T ss_pred CCcEEEEEecCCCCCCceEEEEECCCcccccchhHH------------HHHHHHHHHHCCCEEEEECCCCCCCCCCcccc
Confidence 344443 44454 3589999999987654322100 123678888999999999999865432
Q ss_pred ---cccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 489 ---GEERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 489 ---~~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
.....|+.++++++.+. + ..|++++|+||||.+++.+|.+++ +++++
T Consensus 77 ~~~~~~~~Dv~~ai~~L~~~-~--~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lV 128 (266)
T TIGR03101 77 ARWDVWKEDVAAAYRWLIEQ-G--HPPVTLWGLRLGALLALDAANPLAAKCNRLV 128 (266)
T ss_pred CCHHHHHHHHHHHHHHHHhc-C--CCCEEEEEECHHHHHHHHHHHhCccccceEE
Confidence 12246777787777654 3 569999999999999999998864 44444
No 33
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=98.82 E-value=1.3e-07 Score=95.71 Aligned_cols=182 Identities=15% Similarity=0.210 Sum_probs=112.5
Q ss_pred EEEeecCC--CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCC-CCc--CCCc------
Q 040989 421 VIWQIPDS--PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSA-GRC--WTLG------ 489 (700)
Q Consensus 421 l~~~~P~~--pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~-g~~--w~~~------ 489 (700)
.|...|+. |++.||++|++.+-. +....++.+++++||.|+++|.- ++. ....
T Consensus 3 ay~~~P~~~~~~~~Vvv~~d~~G~~----------------~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~ 66 (218)
T PF01738_consen 3 AYVARPEGGGPRPAVVVIHDIFGLN----------------PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAA 66 (218)
T ss_dssp EEEEEETTSSSEEEEEEE-BTTBS-----------------HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHH
T ss_pred EEEEeCCCCCCCCEEEEEcCCCCCc----------------hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHH
Confidence 35556874 689999999886552 22356899999999999999974 333 1110
Q ss_pred ----------ccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhcc-CcCeEEEEEe-cCCCCCC-CCCCCCC
Q 040989 490 ----------EERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGL-RFSSIALMIA-EGLFDQM-DIPEDYP 556 (700)
Q Consensus 490 ----------~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~-~~~glv~~I~-~G~~~~~-~~~~~yP 556 (700)
.-..++.++++++.++...+..++.++|+|+||.+|+.+|... .+++++...- ....... +....-.
T Consensus 67 ~~~~~~~~~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~~~~~a~v~~yg~~~~~~~~~~~~~~~~ 146 (218)
T PF01738_consen 67 MRELFAPRPEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARDPRVDAAVSFYGGSPPPPPLEDAPKIKA 146 (218)
T ss_dssp HHHCHHHSHHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCTTTSSEEEEES-SSSGGGHHHHGGG--S
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhccccceEEEEcCCCCCCcchhhhcccCC
Confidence 0124556777777776656778999999999999999999987 5788664332 0011111 1223345
Q ss_pred CeEEEccCCChhH-HHHHHHHHHHHHhCCCeeeEEEecCCcCCccccccCCCCCCHHHHHHHHHH
Q 040989 557 PTLFVHMPKDSYR-QRKIGEFLVVLRNKGIDVAEIECMEFPLSRNFFTDRIPGLEQANSTKLFEL 620 (700)
Q Consensus 557 P~lf~hm~~D~~~-~~~i~~~~~~L~~~gvp~~~i~~~~~~v~p~~f~~rdp~I~~~~S~~l~~a 620 (700)
|+++.++..|+.. .+.+....+.|++.|.+++...-+. ..=.|.....+.-.++.++.-++.
T Consensus 147 P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~g--a~HgF~~~~~~~~~~~aa~~a~~~ 209 (218)
T PF01738_consen 147 PVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPG--AGHGFANPSRPPYDPAAAEDAWQR 209 (218)
T ss_dssp -EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT----TTTTSTTSTT--HHHHHHHHHH
T ss_pred CEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCC--CcccccCCCCcccCHHHHHHHHHH
Confidence 9999999999874 5567888889999999987776641 122344344443344444443333
No 34
>PRK10115 protease 2; Provisional
Probab=98.80 E-value=1.5e-07 Score=111.68 Aligned_cols=186 Identities=14% Similarity=0.139 Sum_probs=118.1
Q ss_pred eccCCeEEE-Eee--cC----CCceEEEEeccCCCCCCc-cccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCC--
Q 040989 414 ELRNGTDVI-WQI--PD----SPKAVLFLAHGCNGRAVH-FWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAG-- 483 (700)
Q Consensus 414 ~~~~G~~l~-~~~--P~----~pr~vvv~lHG~~~~~~~-~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g-- 483 (700)
.+.||.++- |-+ |. .+.|+||+.||+-+.... .| ....+.++++||+|+.+..||
T Consensus 422 ~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f---------------~~~~~~l~~rG~~v~~~n~RGs~ 486 (686)
T PRK10115 422 TARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADF---------------SFSRLSLLDRGFVYAIVHVRGGG 486 (686)
T ss_pred ECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCc---------------cHHHHHHHHCCcEEEEEEcCCCC
Confidence 468898873 232 42 357999999997444321 11 124578999999999999997
Q ss_pred ---CcCC------C-cccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhcc--CcCeEEEEEecCCCCCCC-
Q 040989 484 ---RCWT------L-GEERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGL--RFSSIALMIAEGLFDQMD- 550 (700)
Q Consensus 484 ---~~w~------~-~~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~--~~~glv~~I~~G~~~~~~- 550 (700)
+.|. + ..+..|+.+++++++++.-.++.++.+.|.|.||+++..+..+. .|+|++.. -|.++-..
T Consensus 487 g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~--vp~~D~~~~ 564 (686)
T PRK10115 487 ELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQ--VPFVDVVTT 564 (686)
T ss_pred ccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEec--CCchhHhhh
Confidence 2331 1 24568999999999988556889999999999999999888765 37775421 12221110
Q ss_pred -CCCCCCCeEE---Ecc-CCChhHHHHHHHH--HHHHHhCCCeeeEEEecCCcCCccccccCCCCCCHHHHHHHHHHHHH
Q 040989 551 -IPEDYPPTLF---VHM-PKDSYRQRKIGEF--LVVLRNKGIDVAEIECMEFPLSRNFFTDRIPGLEQANSTKLFELFQE 623 (700)
Q Consensus 551 -~~~~yPP~lf---~hm-~~D~~~~~~i~~~--~~~L~~~gvp~~~i~~~~~~v~p~~f~~rdp~I~~~~S~~l~~al~~ 623 (700)
.....|++.- ..| +.|+...+.+... +..+++...|+.++.. +.+|+.|+..+|++++++|++
T Consensus 565 ~~~~~~p~~~~~~~e~G~p~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~----------g~~D~RV~~~~~~k~~a~Lr~ 634 (686)
T PRK10115 565 MLDESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTT----------GLHDSQVQYWEPAKWVAKLRE 634 (686)
T ss_pred cccCCCCCChhHHHHhCCCCCHHHHHHHHHcCchhccCccCCCceeEEe----------cCCCCCcCchHHHHHHHHHHh
Confidence 0123444331 012 2232222222111 2334444566554433 479999999999999999997
Q ss_pred ccc
Q 040989 624 KGF 626 (700)
Q Consensus 624 ~g~ 626 (700)
.|.
T Consensus 635 ~~~ 637 (686)
T PRK10115 635 LKT 637 (686)
T ss_pred cCC
Confidence 663
No 35
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=98.79 E-value=1.2e-07 Score=99.10 Aligned_cols=110 Identities=13% Similarity=0.100 Sum_probs=74.2
Q ss_pred cceeccCCeEEEEee-cCCC-ceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCC
Q 040989 411 PTVELRNGTDVIWQI-PDSP-KAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTL 488 (700)
Q Consensus 411 p~~~~~~G~~l~~~~-P~~p-r~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~ 488 (700)
|.....+|.++.|.. ...+ .+.|||+||.+++... |.. +... +..+|.|+++|.+|++.+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~plvllHG~~~~~~~-w~~---------------~~~~-L~~~~~vi~~Dl~G~G~S~ 66 (276)
T TIGR02240 4 FRTIDLDGQSIRTAVRPGKEGLTPLLIFNGIGANLEL-VFP---------------FIEA-LDPDLEVIAFDVPGVGGSS 66 (276)
T ss_pred EEEeccCCcEEEEEEecCCCCCCcEEEEeCCCcchHH-HHH---------------HHHH-hccCceEEEECCCCCCCCC
Confidence 334456888886654 3222 3579999999888754 321 3343 4568999999999876653
Q ss_pred c----ccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEEE
Q 040989 489 G----EERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIAL 539 (700)
Q Consensus 489 ~----~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv~ 539 (700)
. ....+..+-+..+++..+ -.+++|+|+||||.+++.+|.+.| ++++++
T Consensus 67 ~~~~~~~~~~~~~~~~~~i~~l~--~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl 121 (276)
T TIGR02240 67 TPRHPYRFPGLAKLAARMLDYLD--YGQVNAIGVSWGGALAQQFAHDYPERCKKLIL 121 (276)
T ss_pred CCCCcCcHHHHHHHHHHHHHHhC--cCceEEEEECHHHHHHHHHHHHCHHHhhheEE
Confidence 1 123344444455555554 358999999999999999999874 666553
No 36
>COG0400 Predicted esterase [General function prediction only]
Probab=98.78 E-value=1.9e-07 Score=95.01 Aligned_cols=166 Identities=16% Similarity=0.185 Sum_probs=111.8
Q ss_pred cCCC-ceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCC-----C-C--cCC----Cc---
Q 040989 426 PDSP-KAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSA-----G-R--CWT----LG--- 489 (700)
Q Consensus 426 P~~p-r~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~-----g-~--~w~----~~--- 489 (700)
|..| .++||++||.|++..+|.+. .. +..-.+.++.+-.+ + + +|. ++
T Consensus 13 ~~~p~~~~iilLHG~Ggde~~~~~~----------------~~-~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~ed 75 (207)
T COG0400 13 PGDPAAPLLILLHGLGGDELDLVPL----------------PE-LILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQED 75 (207)
T ss_pred CCCCCCcEEEEEecCCCChhhhhhh----------------hh-hcCCCCeEEcCCCCccccCcccceeecCCCccchhh
Confidence 4444 57999999999998887542 11 11222444444321 1 1 221 11
Q ss_pred --ccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEEEEEecCCCCCCC--C-CCCCCCeEEEc
Q 040989 490 --EERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIALMIAEGLFDQMD--I-PEDYPPTLFVH 562 (700)
Q Consensus 490 --~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv~~I~~G~~~~~~--~-~~~yPP~lf~h 562 (700)
.+.....+.+..+.++++++..++++.|+|.|+.+++.+..+.+ |++++ .++|++.... . ...-+|++..|
T Consensus 76 l~~~~~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ai--l~~g~~~~~~~~~~~~~~~pill~h 153 (207)
T COG0400 76 LDLETEKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAI--LFSGMLPLEPELLPDLAGTPILLSH 153 (207)
T ss_pred HHHHHHHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccch--hcCCcCCCCCccccccCCCeEEEec
Confidence 12355667777888999999999999999999999999999976 77765 3566543321 1 34556999999
Q ss_pred cCCChh-HHHHHHHHHHHHHhCCCeeeEEEecCCcCCccccccCCCCCCHHHHHHHHHHH
Q 040989 563 MPKDSY-RQRKIGEFLVVLRNKGIDVAEIECMEFPLSRNFFTDRIPGLEQANSTKLFELF 621 (700)
Q Consensus 563 m~~D~~-~~~~i~~~~~~L~~~gvp~~~i~~~~~~v~p~~f~~rdp~I~~~~S~~l~~al 621 (700)
|..|+. +.....+..+.|++.|+.++....+ ---.|+.+.-+++..-+
T Consensus 154 G~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-----------~GH~i~~e~~~~~~~wl 202 (207)
T COG0400 154 GTEDPVVPLALAEALAEYLTASGADVEVRWHE-----------GGHEIPPEELEAARSWL 202 (207)
T ss_pred cCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-----------CCCcCCHHHHHHHHHHH
Confidence 999997 4667777888899999999988662 22345655555554433
No 37
>PRK00870 haloalkane dehalogenase; Provisional
Probab=98.74 E-value=1.1e-07 Score=100.96 Aligned_cols=113 Identities=14% Similarity=0.130 Sum_probs=76.8
Q ss_pred cCCcceeccCC-----eEEEEeecCCC-ceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcC
Q 040989 408 QLNPTVELRNG-----TDVIWQIPDSP-KAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISS 481 (700)
Q Consensus 408 ~~~p~~~~~~G-----~~l~~~~P~~p-r~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~ 481 (700)
.+.++..+++| .+++|..-..| .+.|||+||.+.+... |. .++..|.++||.|+++|.
T Consensus 18 ~~~~~~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~~~-w~---------------~~~~~L~~~gy~vi~~Dl 81 (302)
T PRK00870 18 PFAPHYVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWSYL-YR---------------KMIPILAAAGHRVIAPDL 81 (302)
T ss_pred CCCceeEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCchhh-HH---------------HHHHHHHhCCCEEEEECC
Confidence 33444455666 67777653332 4689999999776544 32 256667778999999999
Q ss_pred CCCcCCCcc------cHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 482 AGRCWTLGE------ERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 482 ~g~~w~~~~------e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
+|++.+... ...+..+.+..+.++.+ ..++.++||||||.++..+|.++| +.+++
T Consensus 82 ~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l~--~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lv 144 (302)
T PRK00870 82 IGFGRSDKPTRREDYTYARHVEWMRSWFEQLD--LTDVTLVCQDWGGLIGLRLAAEHPDRFARLV 144 (302)
T ss_pred CCCCCCCCCCCcccCCHHHHHHHHHHHHHHcC--CCCEEEEEEChHHHHHHHHHHhChhheeEEE
Confidence 997765321 12333344445555554 358999999999999999999875 66665
No 38
>PRK10985 putative hydrolase; Provisional
Probab=98.73 E-value=1.1e-07 Score=102.69 Aligned_cols=103 Identities=27% Similarity=0.364 Sum_probs=74.2
Q ss_pred eccCCeEE--EEee-cC--CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCC
Q 040989 414 ELRNGTDV--IWQI-PD--SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTL 488 (700)
Q Consensus 414 ~~~~G~~l--~~~~-P~--~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~ 488 (700)
...||..+ .|.. |. .++++||++||.+++....+- ..++..|.++||+|+++|+||+.-+.
T Consensus 37 ~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~--------------~~~~~~l~~~G~~v~~~d~rG~g~~~ 102 (324)
T PRK10985 37 ELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYA--------------HGLLEAAQKRGWLGVVMHFRGCSGEP 102 (324)
T ss_pred ECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHH--------------HHHHHHHHHCCCEEEEEeCCCCCCCc
Confidence 56677654 3322 22 247899999999776433211 23678899999999999999853211
Q ss_pred --------cccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhcc
Q 040989 489 --------GEERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGL 532 (700)
Q Consensus 489 --------~~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~ 532 (700)
.....|+.++++++.++++ ..|++++|+||||.+++.++...
T Consensus 103 ~~~~~~~~~~~~~D~~~~i~~l~~~~~--~~~~~~vG~S~GG~i~~~~~~~~ 152 (324)
T PRK10985 103 NRLHRIYHSGETEDARFFLRWLQREFG--HVPTAAVGYSLGGNMLACLLAKE 152 (324)
T ss_pred cCCcceECCCchHHHHHHHHHHHHhCC--CCCEEEEEecchHHHHHHHHHhh
Confidence 1246888999999888764 56899999999999888777664
No 39
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=98.72 E-value=6.3e-08 Score=102.07 Aligned_cols=105 Identities=16% Similarity=0.203 Sum_probs=73.7
Q ss_pred CCeEEEEeecCCCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCc-----cc
Q 040989 417 NGTDVIWQIPDSPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLG-----EE 491 (700)
Q Consensus 417 ~G~~l~~~~P~~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~-----~e 491 (700)
+|.++.|.-|...++.|||+||.++++.. |. .++..|.++||.|+++|.+|+..+.. ..
T Consensus 5 ~~~~~~~~~~~~~~p~vvliHG~~~~~~~-w~---------------~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~ 68 (273)
T PLN02211 5 NGEEVTDMKPNRQPPHFVLIHGISGGSWC-WY---------------KIRCLMENSGYKVTCIDLKSAGIDQSDADSVTT 68 (273)
T ss_pred cccccccccccCCCCeEEEECCCCCCcCc-HH---------------HHHHHHHhCCCEEEEecccCCCCCCCCcccCCC
Confidence 56666665676667899999999888643 43 25667778899999999998765421 12
Q ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 492 RLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 492 ~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
..+..+.+..++++.+ ...+++++||||||.+++.++..+| +.+++
T Consensus 69 ~~~~~~~l~~~i~~l~-~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv 116 (273)
T PLN02211 69 FDEYNKPLIDFLSSLP-ENEKVILVGHSAGGLSVTQAIHRFPKKICLAV 116 (273)
T ss_pred HHHHHHHHHHHHHhcC-CCCCEEEEEECchHHHHHHHHHhChhheeEEE
Confidence 3333334444445442 2479999999999999999998764 55555
No 40
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=98.71 E-value=1.9e-07 Score=98.47 Aligned_cols=106 Identities=16% Similarity=0.100 Sum_probs=75.0
Q ss_pred eccCCeEEEEeecCCCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCc----
Q 040989 414 ELRNGTDVIWQIPDSPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLG---- 489 (700)
Q Consensus 414 ~~~~G~~l~~~~P~~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~---- 489 (700)
.+.+|.+++|+.-.++.+.|||+||.+.+...| . .+...|.++ |.|+++|.+|++.+..
T Consensus 13 ~~~~~~~i~y~~~G~~~~~vlllHG~~~~~~~w-~---------------~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~ 75 (294)
T PLN02824 13 WRWKGYNIRYQRAGTSGPALVLVHGFGGNADHW-R---------------KNTPVLAKS-HRVYAIDLLGYGYSDKPNPR 75 (294)
T ss_pred EEEcCeEEEEEEcCCCCCeEEEECCCCCChhHH-H---------------HHHHHHHhC-CeEEEEcCCCCCCCCCCccc
Confidence 356788888876433456899999998887543 2 245555555 7999999998665421
Q ss_pred -------ccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 490 -------EERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 490 -------~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
-...+..+.+..+.++.++ .+++++||||||.+++.+|.++| +++++
T Consensus 76 ~~~~~~~~~~~~~a~~l~~~l~~l~~--~~~~lvGhS~Gg~va~~~a~~~p~~v~~li 131 (294)
T PLN02824 76 SAPPNSFYTFETWGEQLNDFCSDVVG--DPAFVICNSVGGVVGLQAAVDAPELVRGVM 131 (294)
T ss_pred cccccccCCHHHHHHHHHHHHHHhcC--CCeEEEEeCHHHHHHHHHHHhChhheeEEE
Confidence 1234445555555666553 68999999999999999999986 66765
No 41
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=98.70 E-value=1.2e-07 Score=96.61 Aligned_cols=107 Identities=17% Similarity=0.142 Sum_probs=72.0
Q ss_pred ccCCeEEEEeecC--CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCc---
Q 040989 415 LRNGTDVIWQIPD--SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLG--- 489 (700)
Q Consensus 415 ~~~G~~l~~~~P~--~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~--- 489 (700)
..+|..+.|+.+. .+++.||++||..+....+|.. +...+.+.||.|+++|.+|+.-+..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~---------------~~~~l~~~g~~vi~~d~~G~G~s~~~~~ 72 (288)
T TIGR01250 8 TVDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLEN---------------LRELLKEEGREVIMYDQLGCGYSDQPDD 72 (288)
T ss_pred cCCCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHH---------------HHHHHHhcCCEEEEEcCCCCCCCCCCCc
Confidence 3456666666643 3467889999986665555431 3444555699999999998654321
Q ss_pred ----ccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 490 ----EERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 490 ----~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
....+..+.+..+.++.+ ..+++++|+||||.+++.+|..+| +.+++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lv 125 (288)
T TIGR01250 73 SDELWTIDYFVDELEEVREKLG--LDKFYLLGHSWGGMLAQEYALKYGQHLKGLI 125 (288)
T ss_pred ccccccHHHHHHHHHHHHHHcC--CCcEEEEEeehHHHHHHHHHHhCccccceee
Confidence 123444445556666664 346999999999999999998875 55544
No 42
>PLN00021 chlorophyllase
Probab=98.67 E-value=1.6e-07 Score=101.35 Aligned_cols=100 Identities=22% Similarity=0.239 Sum_probs=72.8
Q ss_pred CCeEEEEeecC--CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcC-CCcccHH
Q 040989 417 NGTDVIWQIPD--SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCW-TLGEERL 493 (700)
Q Consensus 417 ~G~~l~~~~P~--~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w-~~~~e~~ 493 (700)
.+..+..+.|. ...++|+|+||++.+... | ..+..++.++||.|+++|.++..- ....+..
T Consensus 37 ~~~p~~v~~P~~~g~~PvVv~lHG~~~~~~~-y---------------~~l~~~Las~G~~VvapD~~g~~~~~~~~~i~ 100 (313)
T PLN00021 37 PPKPLLVATPSEAGTYPVLLFLHGYLLYNSF-Y---------------SQLLQHIASHGFIVVAPQLYTLAGPDGTDEIK 100 (313)
T ss_pred CCceEEEEeCCCCCCCCEEEEECCCCCCccc-H---------------HHHHHHHHhCCCEEEEecCCCcCCCCchhhHH
Confidence 45566667775 346899999999877533 2 236788899999999999876321 2234456
Q ss_pred HHHHHHHHHHHHc--------CCCCCCEEEEecChhHHHHHHHhhcc
Q 040989 494 VVREIIRWWVERH--------KLEKLPLVALGASSGGYFVSALAKGL 532 (700)
Q Consensus 494 ~v~a~l~~~~~~~--------~l~~~pl~l~G~S~GG~~a~~la~~~ 532 (700)
++.++++|+.+.. ..+..+++++||||||++|+.+|...
T Consensus 101 d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~ 147 (313)
T PLN00021 101 DAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGK 147 (313)
T ss_pred HHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhc
Confidence 6777787776532 23446799999999999999999875
No 43
>PLN02511 hydrolase
Probab=98.67 E-value=2e-07 Score=103.33 Aligned_cols=109 Identities=22% Similarity=0.267 Sum_probs=79.5
Q ss_pred eccCCeEEE--EeecC-----CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcC
Q 040989 414 ELRNGTDVI--WQIPD-----SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCW 486 (700)
Q Consensus 414 ~~~~G~~l~--~~~P~-----~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w 486 (700)
...||..+. |..+. ..+++||++||.+++....|- ..++..++++||.|+++|+||++.
T Consensus 77 ~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~--------------~~~~~~~~~~g~~vv~~d~rG~G~ 142 (388)
T PLN02511 77 RTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYV--------------RHMLLRARSKGWRVVVFNSRGCAD 142 (388)
T ss_pred ECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHH--------------HHHHHHHHHCCCEEEEEecCCCCC
Confidence 345666553 43321 237899999999776544221 235677889999999999998655
Q ss_pred CC--------cccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC----cCeEE
Q 040989 487 TL--------GEERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR----FSSIA 538 (700)
Q Consensus 487 ~~--------~~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~----~~glv 538 (700)
+. .....|+.++++++..++ +..|++++|+||||.+++.++.+.+ +.+++
T Consensus 143 s~~~~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v 204 (388)
T PLN02511 143 SPVTTPQFYSASFTGDLRQVVDHVAGRY--PSANLYAAGWSLGANILVNYLGEEGENCPLSGAV 204 (388)
T ss_pred CCCCCcCEEcCCchHHHHHHHHHHHHHC--CCCCEEEEEechhHHHHHHHHHhcCCCCCceEEE
Confidence 42 234689999999998876 4679999999999999999988764 45544
No 44
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.66 E-value=1.3e-06 Score=90.58 Aligned_cols=153 Identities=14% Similarity=0.141 Sum_probs=106.9
Q ss_pred EEeecCC--CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCC---CcCC---------
Q 040989 422 IWQIPDS--PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAG---RCWT--------- 487 (700)
Q Consensus 422 ~~~~P~~--pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g---~~w~--------- 487 (700)
|+..|.. +.|+||++|++.+-.. +-..++++++.+||.|+++|.-+ ....
T Consensus 17 ~~a~P~~~~~~P~VIv~hei~Gl~~----------------~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~ 80 (236)
T COG0412 17 YLARPAGAGGFPGVIVLHEIFGLNP----------------HIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELE 80 (236)
T ss_pred EEecCCcCCCCCEEEEEecccCCch----------------HHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHh
Confidence 4444763 3489999999976632 23578999999999999999632 1100
Q ss_pred --------CcccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC-cCeEEEEEecCCCCC---CCCCCCC
Q 040989 488 --------LGEERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR-FSSIALMIAEGLFDQ---MDIPEDY 555 (700)
Q Consensus 488 --------~~~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~-~~glv~~I~~G~~~~---~~~~~~y 555 (700)
+..-..|+.+.++++.++...+..+|.++|+|+||.+|+.++.+.| ++|.+... |.... .+....-
T Consensus 81 ~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~v~a~v~fy--g~~~~~~~~~~~~~~ 158 (236)
T COG0412 81 TGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAPEVKAAVAFY--GGLIADDTADAPKIK 158 (236)
T ss_pred hhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccCCccEEEEec--CCCCCCccccccccc
Confidence 0122467888888888776567889999999999999999999984 88866432 22221 1222334
Q ss_pred CCeEEEccCCChhH-HHHHHHHHHHHHhCCCeeeEEEe
Q 040989 556 PPTLFVHMPKDSYR-QRKIGEFLVVLRNKGIDVAEIEC 592 (700)
Q Consensus 556 PP~lf~hm~~D~~~-~~~i~~~~~~L~~~gvp~~~i~~ 592 (700)
.|+++.+..+|... ........+.|...++.+.....
T Consensus 159 ~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y 196 (236)
T COG0412 159 VPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIY 196 (236)
T ss_pred CcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEe
Confidence 49999888889874 55666677778888766654444
No 45
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=98.66 E-value=4.3e-07 Score=90.17 Aligned_cols=89 Identities=21% Similarity=0.206 Sum_probs=62.5
Q ss_pred ceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCcccHHHHHHHHHHHHHHcCCC
Q 040989 430 KAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLGEERLVVREIIRWWVERHKLE 509 (700)
Q Consensus 430 r~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~~e~~~v~a~l~~~~~~~~l~ 509 (700)
++.||++||.+++... |.. +.. .+..+|.|+++|.+|+.-+......++.++++.+.+..
T Consensus 4 ~~~iv~~HG~~~~~~~-~~~---------------~~~-~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~--- 63 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEV-FRC---------------LDE-ELSAHFTLHLVDLPGHGRSRGFGPLSLADAAEAIAAQA--- 63 (245)
T ss_pred CceEEEEcCCCCchhh-HHH---------------HHH-hhccCeEEEEecCCcCccCCCCCCcCHHHHHHHHHHhC---
Confidence 3679999999887643 321 333 34568999999999866543322234555555555543
Q ss_pred CCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 510 KLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 510 ~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
..|++++|+||||++++.+|.++| +.+++
T Consensus 64 ~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~i 94 (245)
T TIGR01738 64 PDPAIWLGWSLGGLVALHIAATHPDRVRALV 94 (245)
T ss_pred CCCeEEEEEcHHHHHHHHHHHHCHHhhheee
Confidence 369999999999999999998875 55655
No 46
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.64 E-value=1.4e-06 Score=99.01 Aligned_cols=109 Identities=19% Similarity=0.226 Sum_probs=72.3
Q ss_pred cCCeEEEEee--cCC--CceEEEEeccCCCCCCccccCCCCCCCCCCCchHH-HHHHHHHHCCcEEEEEcCCCCcCCCcc
Q 040989 416 RNGTDVIWQI--PDS--PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEER-LLVLHALSRGFAIITISSAGRCWTLGE 490 (700)
Q Consensus 416 ~~G~~l~~~~--P~~--pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~-~~~~~~~~~GyaV~avd~~g~~w~~~~ 490 (700)
..|.++++.. |+. +++.|||+||.+++.. +|.. .+ .....+.++||.|+++|.+|++.+...
T Consensus 183 ~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~-~W~~------------~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p 249 (481)
T PLN03087 183 SSNESLFVHVQQPKDNKAKEDVLFIHGFISSSA-FWTE------------TLFPNFSDAAKSTYRLFAVDLLGFGRSPKP 249 (481)
T ss_pred eCCeEEEEEEecCCCCCCCCeEEEECCCCccHH-HHHH------------HHHHHHHHHhhCCCEEEEECCCCCCCCcCC
Confidence 3556787765 542 3689999999988864 3431 00 011113468999999999997654211
Q ss_pred -----cHHHHHHHH-HHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEEE
Q 040989 491 -----ERLVVREII-RWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIAL 539 (700)
Q Consensus 491 -----e~~~v~a~l-~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv~ 539 (700)
...+..+.+ +.+.++++ ..+++++||||||.+++.+|.++| +.++++
T Consensus 250 ~~~~ytl~~~a~~l~~~ll~~lg--~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVL 304 (481)
T PLN03087 250 ADSLYTLREHLEMIERSVLERYK--VKSFHIVAHSLGCILALALAVKHPGAVKSLTL 304 (481)
T ss_pred CCCcCCHHHHHHHHHHHHHHHcC--CCCEEEEEECHHHHHHHHHHHhChHhccEEEE
Confidence 122323333 35666665 458999999999999999999986 677663
No 47
>PLN02965 Probable pheophorbidase
Probab=98.62 E-value=2.1e-07 Score=96.30 Aligned_cols=93 Identities=17% Similarity=0.184 Sum_probs=64.9
Q ss_pred CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCc-----ccHHHHHHHHHHHH
Q 040989 429 PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLG-----EERLVVREIIRWWV 503 (700)
Q Consensus 429 pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~-----~e~~~v~a~l~~~~ 503 (700)
|...|||+||.+++.. .|.. ++..|.++||.|+++|.+|++.+.. ....+..+-+..+.
T Consensus 2 ~~~~vvllHG~~~~~~-~w~~---------------~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l 65 (255)
T PLN02965 2 PEIHFVFVHGASHGAW-CWYK---------------LATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALL 65 (255)
T ss_pred CceEEEEECCCCCCcC-cHHH---------------HHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHH
Confidence 3456999999987753 3432 5566668999999999999887631 11233333344555
Q ss_pred HHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 504 ERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 504 ~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
++.+. ..|+++.||||||.+++.+|.++| +.+++
T Consensus 66 ~~l~~-~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lv 101 (255)
T PLN02965 66 SDLPP-DHKVILVGHSIGGGSVTEALCKFTDKISMAI 101 (255)
T ss_pred HhcCC-CCCEEEEecCcchHHHHHHHHhCchheeEEE
Confidence 55532 259999999999999999999864 55554
No 48
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.62 E-value=2.3e-07 Score=90.45 Aligned_cols=87 Identities=20% Similarity=0.296 Sum_probs=62.9
Q ss_pred EEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCc------ccHHHHHHHHHHHHHHc
Q 040989 433 LFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLG------EERLVVREIIRWWVERH 506 (700)
Q Consensus 433 vv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~------~e~~~v~a~l~~~~~~~ 506 (700)
|||+||.+.+... |. .++..| ++||.|+++|.+|+..+.. ....+..+.+..++++.
T Consensus 1 vv~~hG~~~~~~~-~~---------------~~~~~l-~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~ 63 (228)
T PF12697_consen 1 VVFLHGFGGSSES-WD---------------PLAEAL-ARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDAL 63 (228)
T ss_dssp EEEE-STTTTGGG-GH---------------HHHHHH-HTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHT
T ss_pred eEEECCCCCCHHH-HH---------------HHHHHH-hCCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccc
Confidence 7999999998744 32 255555 6899999999999776532 22344444555666666
Q ss_pred CCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 507 KLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 507 ~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
+. .|++++|||+||.+++.++.+.| +++++
T Consensus 64 ~~--~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v 95 (228)
T PF12697_consen 64 GI--KKVILVGHSMGGMIALRLAARYPDRVKGLV 95 (228)
T ss_dssp TT--SSEEEEEETHHHHHHHHHHHHSGGGEEEEE
T ss_pred cc--ccccccccccccccccccccccccccccce
Confidence 53 69999999999999999998865 66654
No 49
>PRK11071 esterase YqiA; Provisional
Probab=98.61 E-value=2.5e-07 Score=92.68 Aligned_cols=82 Identities=22% Similarity=0.250 Sum_probs=61.3
Q ss_pred eEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHH--CCcEEEEEcCCCCcCCCcccHHHHHHHHHHHHHHcCC
Q 040989 431 AVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALS--RGFAIITISSAGRCWTLGEERLVVREIIRWWVERHKL 508 (700)
Q Consensus 431 ~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~--~GyaV~avd~~g~~w~~~~e~~~v~a~l~~~~~~~~l 508 (700)
+.||++||.+++...+.. ..+...+.+ .+|.|+++|.+|. + .++.+.+..+.++++
T Consensus 2 p~illlHGf~ss~~~~~~--------------~~~~~~l~~~~~~~~v~~~dl~g~----~---~~~~~~l~~l~~~~~- 59 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKA--------------TLLKNWLAQHHPDIEMIVPQLPPY----P---ADAAELLESLVLEHG- 59 (190)
T ss_pred CeEEEECCCCCCcchHHH--------------HHHHHHHHHhCCCCeEEeCCCCCC----H---HHHHHHHHHHHHHcC-
Confidence 469999999998765431 112333333 3899999999874 2 456677778887765
Q ss_pred CCCCEEEEecChhHHHHHHHhhccCcC
Q 040989 509 EKLPLVALGASSGGYFVSALAKGLRFS 535 (700)
Q Consensus 509 ~~~pl~l~G~S~GG~~a~~la~~~~~~ 535 (700)
..+++++|+||||++++.+|.++|..
T Consensus 60 -~~~~~lvG~S~Gg~~a~~~a~~~~~~ 85 (190)
T PRK11071 60 -GDPLGLVGSSLGGYYATWLSQCFMLP 85 (190)
T ss_pred -CCCeEEEEECHHHHHHHHHHHHcCCC
Confidence 35899999999999999999998843
No 50
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=98.59 E-value=5.7e-07 Score=94.79 Aligned_cols=109 Identities=19% Similarity=0.211 Sum_probs=72.7
Q ss_pred cCCeEE--EEeecCC--CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCc--
Q 040989 416 RNGTDV--IWQIPDS--PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLG-- 489 (700)
Q Consensus 416 ~~G~~l--~~~~P~~--pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~-- 489 (700)
.+|.++ ++..|.+ ++++|++.||.....+++.. ...+++.|.++||.|+++|.+|++-+.+
T Consensus 9 ~~~~~l~g~~~~p~~~~~~~vv~i~gg~~~~~g~~~~-------------~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~ 75 (274)
T TIGR03100 9 CEGETLVGVLHIPGASHTTGVLIVVGGPQYRVGSHRQ-------------FVLLARRLAEAGFPVLRFDYRGMGDSEGEN 75 (274)
T ss_pred cCCcEEEEEEEcCCCCCCCeEEEEeCCccccCCchhH-------------HHHHHHHHHHCCCEEEEeCCCCCCCCCCCC
Confidence 445555 3455764 34555555555444333211 1346788999999999999998665422
Q ss_pred ----ccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhc-cCcCeEE
Q 040989 490 ----EERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKG-LRFSSIA 538 (700)
Q Consensus 490 ----~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~-~~~~glv 538 (700)
....|+.++++++.++.. .-.+++++|+||||.+++.+|.. .++++++
T Consensus 76 ~~~~~~~~d~~~~~~~l~~~~~-g~~~i~l~G~S~Gg~~a~~~a~~~~~v~~li 128 (274)
T TIGR03100 76 LGFEGIDADIAAAIDAFREAAP-HLRRIVAWGLCDAASAALLYAPADLRVAGLV 128 (274)
T ss_pred CCHHHHHHHHHHHHHHHHhhCC-CCCcEEEEEECHHHHHHHHHhhhCCCccEEE
Confidence 223678889988887641 12469999999999999999865 3567755
No 51
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=98.58 E-value=2.1e-07 Score=93.67 Aligned_cols=92 Identities=18% Similarity=0.258 Sum_probs=63.8
Q ss_pred CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCc-----ccHHHHHHHHHHH
Q 040989 428 SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLG-----EERLVVREIIRWW 502 (700)
Q Consensus 428 ~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~-----~e~~~v~a~l~~~ 502 (700)
..+++||++||.+++... |.. . ..++.+||.|+++|.+|++.+.. ....+..+.+..+
T Consensus 11 ~~~~~iv~lhG~~~~~~~-~~~---------------~-~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~ 73 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSY-WAP---------------Q-LDVLTQRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQL 73 (257)
T ss_pred CCCCEEEEEcCCCcchhH-HHH---------------H-HHHHHhccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHH
Confidence 447899999999888643 321 2 34556789999999998765421 1233444444455
Q ss_pred HHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 503 VERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 503 ~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
+++.+ ..+++++|+||||.+++.+|.+.+ +.+++
T Consensus 74 i~~~~--~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i 109 (257)
T TIGR03611 74 LDALN--IERFHFVGHALGGLIGLQLALRYPERLLSLV 109 (257)
T ss_pred HHHhC--CCcEEEEEechhHHHHHHHHHHChHHhHHhe
Confidence 55554 357999999999999999998765 55544
No 52
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.56 E-value=9.1e-07 Score=87.78 Aligned_cols=169 Identities=17% Similarity=0.191 Sum_probs=107.7
Q ss_pred EEEEeecC-CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCC-----CcCCC-cccH
Q 040989 420 DVIWQIPD-SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAG-----RCWTL-GEER 492 (700)
Q Consensus 420 ~l~~~~P~-~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g-----~~w~~-~~e~ 492 (700)
+..|+-+. +++|+.|++|=.-..++....+ --..+.+.|.++||+++.+++|| ..|.- -.|.
T Consensus 17 e~~~~~~~~~~~~iAli~HPHPl~gGtm~nk-----------vv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~ 85 (210)
T COG2945 17 EGRYEPAKTPAAPIALICHPHPLFGGTMNNK-----------VVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGEL 85 (210)
T ss_pred eeccCCCCCCCCceEEecCCCccccCccCCH-----------HHHHHHHHHHhCCceEEeecccccccccCcccCCcchH
Confidence 33444443 5689999999774444333321 01357788999999999999997 23322 2578
Q ss_pred HHHHHHHHHHHHHcCCCCCCE-EEEecChhHHHHHHHhhccCcCeEEEEEecCCCCCCCC--CCCCC-CeEEEccCCChh
Q 040989 493 LVVREIIRWWVERHKLEKLPL-VALGASSGGYFVSALAKGLRFSSIALMIAEGLFDQMDI--PEDYP-PTLFVHMPKDSY 568 (700)
Q Consensus 493 ~~v~a~l~~~~~~~~l~~~pl-~l~G~S~GG~~a~~la~~~~~~glv~~I~~G~~~~~~~--~~~yP-P~lf~hm~~D~~ 568 (700)
.|++++++|+.+++ +..|. -+.|+|-|+++++.+|.+.+-.++.+-++ -+.+..+. ...-| |.+++++.+|.+
T Consensus 86 ~Da~aaldW~~~~h--p~s~~~~l~GfSFGa~Ia~~la~r~~e~~~~is~~-p~~~~~dfs~l~P~P~~~lvi~g~~Ddv 162 (210)
T COG2945 86 EDAAAALDWLQARH--PDSASCWLAGFSFGAYIAMQLAMRRPEILVFISIL-PPINAYDFSFLAPCPSPGLVIQGDADDV 162 (210)
T ss_pred HHHHHHHHHHHhhC--CCchhhhhcccchHHHHHHHHHHhcccccceeecc-CCCCchhhhhccCCCCCceeEecChhhh
Confidence 99999999999998 57777 78899999999999999876444321121 11111121 22334 899999999966
Q ss_pred HHHHHHHHHHHHHhCCCeeeEEEecCCcCCccccccCCCCC
Q 040989 569 RQRKIGEFLVVLRNKGIDVAEIECMEFPLSRNFFTDRIPGL 609 (700)
Q Consensus 569 ~~~~i~~~~~~L~~~gvp~~~i~~~~~~v~p~~f~~rdp~I 609 (700)
. .....++.- .+++..++.... +--||...-..+
T Consensus 163 v--~l~~~l~~~--~~~~~~~i~i~~---a~HFF~gKl~~l 196 (210)
T COG2945 163 V--DLVAVLKWQ--ESIKITVITIPG---ADHFFHGKLIEL 196 (210)
T ss_pred h--cHHHHHHhh--cCCCCceEEecC---CCceecccHHHH
Confidence 4 222233322 346666666642 455664443333
No 53
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=98.55 E-value=1.6e-06 Score=93.90 Aligned_cols=105 Identities=17% Similarity=0.140 Sum_probs=73.0
Q ss_pred ccCCeEEEEeecC-CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCC----c
Q 040989 415 LRNGTDVIWQIPD-SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTL----G 489 (700)
Q Consensus 415 ~~~G~~l~~~~P~-~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~----~ 489 (700)
..++.++.|..-. +..+.||++||++++...|.. +.. .+.++|.|+++|.+|+..+. .
T Consensus 115 ~~~~~~i~~~~~g~~~~~~vl~~HG~~~~~~~~~~----------------~~~-~l~~~~~v~~~d~~g~G~s~~~~~~ 177 (371)
T PRK14875 115 RIGGRTVRYLRLGEGDGTPVVLIHGFGGDLNNWLF----------------NHA-ALAAGRPVIALDLPGHGASSKAVGA 177 (371)
T ss_pred eEcCcEEEEecccCCCCCeEEEECCCCCccchHHH----------------HHH-HHhcCCEEEEEcCCCCCCCCCCCCC
Confidence 3456667654422 336789999999888654421 233 45667999999999876652 2
Q ss_pred ccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 490 EERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 490 ~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
....++.+.+..+.++.+ ..+++++|||+||++++.+|...+ +.+++
T Consensus 178 ~~~~~~~~~~~~~~~~~~--~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv 226 (371)
T PRK14875 178 GSLDELAAAVLAFLDALG--IERAHLVGHSMGGAVALRLAARAPQRVASLT 226 (371)
T ss_pred CCHHHHHHHHHHHHHhcC--CccEEEEeechHHHHHHHHHHhCchheeEEE
Confidence 344555666666666664 458999999999999999998764 55654
No 54
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=98.55 E-value=2.3e-07 Score=101.03 Aligned_cols=112 Identities=13% Similarity=0.162 Sum_probs=76.4
Q ss_pred eccCCeEEEEee--cC--CCceEEEEeccCCCCC--Cc--------cccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEE
Q 040989 414 ELRNGTDVIWQI--PD--SPKAVLFLAHGCNGRA--VH--------FWDRSPNCPNCIGLPEERLLVLHALSRGFAIITI 479 (700)
Q Consensus 414 ~~~~G~~l~~~~--P~--~pr~vvv~lHG~~~~~--~~--------~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~av 479 (700)
+..+|.+++|+. +. ...+.||++||.+++. .. +|+.. +...+.++..+|.|+++
T Consensus 11 ~~~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~------------~~~~~~l~~~~~~vi~~ 78 (351)
T TIGR01392 11 GVLSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDL------------IGPGRAIDTDRYFVVCS 78 (351)
T ss_pred CccCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhc------------cCCCCCcCCCceEEEEe
Confidence 467888998876 31 2357899999998865 22 34320 00013566899999999
Q ss_pred cCCCCcCCC------------------cccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 480 SSAGRCWTL------------------GEERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 480 d~~g~~w~~------------------~~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
|.+|++.+. .....+..+.+..++++++++. +++++|+||||.+++.+|.++| +++++
T Consensus 79 D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~l~G~S~Gg~ia~~~a~~~p~~v~~lv 156 (351)
T TIGR01392 79 NVLGGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQ-IAAVVGGSMGGMQALEWAIDYPERVRAIV 156 (351)
T ss_pred cCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCC-ceEEEEECHHHHHHHHHHHHChHhhheEE
Confidence 999954321 0123555566666677776542 2999999999999999999886 66765
No 55
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=98.53 E-value=5.4e-07 Score=104.36 Aligned_cols=106 Identities=18% Similarity=0.209 Sum_probs=78.2
Q ss_pred ccCCeEEEE--eecC--CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCC---
Q 040989 415 LRNGTDVIW--QIPD--SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWT--- 487 (700)
Q Consensus 415 ~~~G~~l~~--~~P~--~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~--- 487 (700)
..+|.+|++ +.|. .+.|+||++||++.+....+.. .......++++||+|+++|.||+.-+
T Consensus 3 ~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~------------~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~ 70 (550)
T TIGR00976 3 MRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGL------------DKTEPAWFVAQGYAVVIQDTRGRGASEGE 70 (550)
T ss_pred CCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhcccc------------ccccHHHHHhCCcEEEEEeccccccCCCc
Confidence 357888864 4575 4689999999998764311110 01134678999999999999985432
Q ss_pred ---C-cccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC
Q 040989 488 ---L-GEERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR 533 (700)
Q Consensus 488 ---~-~~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~ 533 (700)
. ..+..|+.++|+|+.++. ....++.++|+|+||.+++.+|...+
T Consensus 71 ~~~~~~~~~~D~~~~i~~l~~q~-~~~~~v~~~G~S~GG~~a~~~a~~~~ 119 (550)
T TIGR00976 71 FDLLGSDEAADGYDLVDWIAKQP-WCDGNVGMLGVSYLAVTQLLAAVLQP 119 (550)
T ss_pred eEecCcccchHHHHHHHHHHhCC-CCCCcEEEEEeChHHHHHHHHhccCC
Confidence 1 456789999999887763 34469999999999999999998754
No 56
>PRK10673 acyl-CoA esterase; Provisional
Probab=98.50 E-value=6.7e-07 Score=91.34 Aligned_cols=101 Identities=16% Similarity=0.111 Sum_probs=65.4
Q ss_pred EEEEeecCC--CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCc---ccHHH
Q 040989 420 DVIWQIPDS--PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLG---EERLV 494 (700)
Q Consensus 420 ~l~~~~P~~--pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~---~e~~~ 494 (700)
++..+.|.+ .++.||++||..++... |.. ++. .+..+|.|+++|.+|++.+.. ....+
T Consensus 4 ~~~~~~~~~~~~~~~iv~lhG~~~~~~~-~~~---------------~~~-~l~~~~~vi~~D~~G~G~s~~~~~~~~~~ 66 (255)
T PRK10673 4 NIRAQTAQNPHNNSPIVLVHGLFGSLDN-LGV---------------LAR-DLVNDHDIIQVDMRNHGLSPRDPVMNYPA 66 (255)
T ss_pred eeeeccCCCCCCCCCEEEECCCCCchhH-HHH---------------HHH-HHhhCCeEEEECCCCCCCCCCCCCCCHHH
Confidence 344444543 36899999999888643 321 333 345689999999998765422 11222
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEEE
Q 040989 495 VREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIAL 539 (700)
Q Consensus 495 v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv~ 539 (700)
..+-+..+++..+ ..++.++||||||.+++.+|.+.| ++++++
T Consensus 67 ~~~d~~~~l~~l~--~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvl 111 (255)
T PRK10673 67 MAQDLLDTLDALQ--IEKATFIGHSMGGKAVMALTALAPDRIDKLVA 111 (255)
T ss_pred HHHHHHHHHHHcC--CCceEEEEECHHHHHHHHHHHhCHhhcceEEE
Confidence 2222333444443 357999999999999999998864 666653
No 57
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=98.50 E-value=4.7e-07 Score=89.60 Aligned_cols=90 Identities=19% Similarity=0.214 Sum_probs=62.1
Q ss_pred ceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCc------ccHHH-HHHHHHHH
Q 040989 430 KAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLG------EERLV-VREIIRWW 502 (700)
Q Consensus 430 r~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~------~e~~~-v~a~l~~~ 502 (700)
+++||++||.+++...|. .+...|. .||.|+++|.+|+.-+.. .+..+ +.+++..+
T Consensus 1 ~~~vv~~hG~~~~~~~~~----------------~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~ 63 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQ----------------ALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATL 63 (251)
T ss_pred CCEEEEEcCCCCchhhHH----------------HHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHH
Confidence 468999999988765432 2455555 899999999998654421 11222 22335555
Q ss_pred HHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 503 VERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 503 ~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
.++. ...|++++|||+||.+|+.+|.+.| +.+++
T Consensus 64 ~~~~--~~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~li 99 (251)
T TIGR03695 64 LDQL--GIEPFFLVGYSMGGRIALYYALQYPERVQGLI 99 (251)
T ss_pred HHHc--CCCeEEEEEeccHHHHHHHHHHhCchheeeeE
Confidence 5555 3568999999999999999999875 45544
No 58
>PRK06489 hypothetical protein; Provisional
Probab=98.48 E-value=9e-07 Score=96.82 Aligned_cols=110 Identities=15% Similarity=0.173 Sum_probs=73.6
Q ss_pred eccCCeEEEEeecCCC--------ceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHH-------HHHHCCcEEEE
Q 040989 414 ELRNGTDVIWQIPDSP--------KAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVL-------HALSRGFAIIT 478 (700)
Q Consensus 414 ~~~~G~~l~~~~P~~p--------r~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~-------~~~~~GyaV~a 478 (700)
...+|.+++|+.-..+ .+.||++||.+++...|+.. .+.. .++..+|.|++
T Consensus 45 ~~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~--------------~~~~~l~~~~~~l~~~~~~Via 110 (360)
T PRK06489 45 ETLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSP--------------TFAGELFGPGQPLDASKYFIIL 110 (360)
T ss_pred CCcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccc--------------hhHHHhcCCCCcccccCCEEEE
Confidence 4578889988763332 46899999998886555421 0121 23468899999
Q ss_pred EcCCCCcCCCc-c----------cHHHH-HHHHHHHHHHcCCCCCCE-EEEecChhHHHHHHHhhccC--cCeEEE
Q 040989 479 ISSAGRCWTLG-E----------ERLVV-REIIRWWVERHKLEKLPL-VALGASSGGYFVSALAKGLR--FSSIAL 539 (700)
Q Consensus 479 vd~~g~~w~~~-~----------e~~~v-~a~l~~~~~~~~l~~~pl-~l~G~S~GG~~a~~la~~~~--~~glv~ 539 (700)
+|.+|++.+.. . ...+. ++++..+.++.+++ ++ +++|+||||++|+.+|.++| +.++++
T Consensus 111 ~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi~--~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVL 184 (360)
T PRK06489 111 PDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGVK--HLRLILGTSMGGMHAWMWGEKYPDFMDALMP 184 (360)
T ss_pred eCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCCC--ceeEEEEECHHHHHHHHHHHhCchhhheeee
Confidence 99999765521 1 12232 33444455656543 44 58999999999999999986 677663
No 59
>PRK03592 haloalkane dehalogenase; Provisional
Probab=98.48 E-value=1.3e-06 Score=92.12 Aligned_cols=105 Identities=13% Similarity=0.086 Sum_probs=73.7
Q ss_pred eccCCeEEEEeecCCCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCc----
Q 040989 414 ELRNGTDVIWQIPDSPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLG---- 489 (700)
Q Consensus 414 ~~~~G~~l~~~~P~~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~---- 489 (700)
...+|.+++|..-. ..+.||++||.+++... |. .++..|.+++ .|+++|.+|++.+..
T Consensus 12 ~~~~g~~i~y~~~G-~g~~vvllHG~~~~~~~-w~---------------~~~~~L~~~~-~via~D~~G~G~S~~~~~~ 73 (295)
T PRK03592 12 VEVLGSRMAYIETG-EGDPIVFLHGNPTSSYL-WR---------------NIIPHLAGLG-RCLAPDLIGMGASDKPDID 73 (295)
T ss_pred EEECCEEEEEEEeC-CCCEEEEECCCCCCHHH-HH---------------HHHHHHhhCC-EEEEEcCCCCCCCCCCCCC
Confidence 45688899887643 34589999999877643 32 2566666665 999999998766531
Q ss_pred ccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 490 EERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 490 ~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
....+..+-+..+.++.+ ..|++++|+|+||.+|+.+|.++| +++++
T Consensus 74 ~~~~~~a~dl~~ll~~l~--~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~li 122 (295)
T PRK03592 74 YTFADHARYLDAWFDALG--LDDVVLVGHDWGSALGFDWAARHPDRVRGIA 122 (295)
T ss_pred CCHHHHHHHHHHHHHHhC--CCCeEEEEECHHHHHHHHHHHhChhheeEEE
Confidence 123333344445555554 368999999999999999999986 55544
No 60
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=98.45 E-value=8.3e-07 Score=88.26 Aligned_cols=91 Identities=16% Similarity=0.186 Sum_probs=62.1
Q ss_pred CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCc----ccHHHHHHHHHHHHH
Q 040989 429 PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLG----EERLVVREIIRWWVE 504 (700)
Q Consensus 429 pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~----~e~~~v~a~l~~~~~ 504 (700)
.+++||++||.+.+... |.. ++ ..++.||.|+++|.+|++-+.. ....+..+.+..+.+
T Consensus 12 ~~~~li~~hg~~~~~~~-~~~---------------~~-~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~ 74 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRM-WDP---------------VL-PALTPDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLD 74 (251)
T ss_pred CCCeEEEEcCcccchhh-HHH---------------HH-HHhhcccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 47899999999877643 321 23 3456899999999998654321 123344444445555
Q ss_pred HcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 505 RHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 505 ~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
..+ ..+++++|||+||++++.+|.+.| +++++
T Consensus 75 ~~~--~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li 108 (251)
T TIGR02427 75 HLG--IERAVFCGLSLGGLIAQGLAARRPDRVRALV 108 (251)
T ss_pred HhC--CCceEEEEeCchHHHHHHHHHHCHHHhHHHh
Confidence 543 458999999999999999998863 45543
No 61
>PRK03204 haloalkane dehalogenase; Provisional
Probab=98.39 E-value=2.7e-06 Score=89.99 Aligned_cols=105 Identities=13% Similarity=0.088 Sum_probs=74.7
Q ss_pred eccCCeEEEEeecCCCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCc----
Q 040989 414 ELRNGTDVIWQIPDSPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLG---- 489 (700)
Q Consensus 414 ~~~~G~~l~~~~P~~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~---- 489 (700)
...+|.+++|..- ...+.|||+||.+..... |. .++ .++..+|.|+++|.+|+..+-.
T Consensus 19 ~~~~~~~i~y~~~-G~~~~iv~lHG~~~~~~~-~~---------------~~~-~~l~~~~~vi~~D~~G~G~S~~~~~~ 80 (286)
T PRK03204 19 FDSSRGRIHYIDE-GTGPPILLCHGNPTWSFL-YR---------------DII-VALRDRFRCVAPDYLGFGLSERPSGF 80 (286)
T ss_pred EEcCCcEEEEEEC-CCCCEEEEECCCCccHHH-HH---------------HHH-HHHhCCcEEEEECCCCCCCCCCCCcc
Confidence 4567778877642 235689999998755422 32 133 4456789999999999766531
Q ss_pred -ccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 490 -EERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 490 -~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
....+..+.+.++++..+ ..++++.|||+||.+++.+|..+| +.+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~--~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lv 130 (286)
T PRK03204 81 GYQIDEHARVIGEFVDHLG--LDRYLSMGQDWGGPISMAVAVERADRVRGVV 130 (286)
T ss_pred ccCHHHHHHHHHHHHHHhC--CCCEEEEEECccHHHHHHHHHhChhheeEEE
Confidence 224667777777777765 358999999999999999998864 66665
No 62
>PRK10349 carboxylesterase BioH; Provisional
Probab=98.38 E-value=8e-07 Score=91.49 Aligned_cols=88 Identities=22% Similarity=0.229 Sum_probs=60.4
Q ss_pred eEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCcccHHHHHHHHHHHHHHcCCCC
Q 040989 431 AVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLGEERLVVREIIRWWVERHKLEK 510 (700)
Q Consensus 431 ~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~~e~~~v~a~l~~~~~~~~l~~ 510 (700)
+.|||+||.+++... |.. ++. .+...|.|+++|.+|++.+...+.....++++.+.+ ++ .
T Consensus 14 ~~ivllHG~~~~~~~-w~~---------------~~~-~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~l~~-~~--~ 73 (256)
T PRK10349 14 VHLVLLHGWGLNAEV-WRC---------------IDE-ELSSHFTLHLVDLPGFGRSRGFGALSLADMAEAVLQ-QA--P 73 (256)
T ss_pred CeEEEECCCCCChhH-HHH---------------HHH-HHhcCCEEEEecCCCCCCCCCCCCCCHHHHHHHHHh-cC--C
Confidence 369999999888654 431 344 445679999999999776532222233444444443 33 3
Q ss_pred CCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 511 LPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 511 ~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
.++.++||||||++|+.+|.+.| +.+++
T Consensus 74 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~li 103 (256)
T PRK10349 74 DKAIWLGWSLGGLVASQIALTHPERVQALV 103 (256)
T ss_pred CCeEEEEECHHHHHHHHHHHhChHhhheEE
Confidence 68899999999999999998864 55655
No 63
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.38 E-value=2.8e-06 Score=90.64 Aligned_cols=105 Identities=12% Similarity=0.126 Sum_probs=71.1
Q ss_pred ccCCeEEEEeecCCC-ceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCcc---
Q 040989 415 LRNGTDVIWQIPDSP-KAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLGE--- 490 (700)
Q Consensus 415 ~~~G~~l~~~~P~~p-r~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~~--- 490 (700)
..+|.+++|.....+ .+.||++||..++.... .+...+...+|.|+++|.+|++.+...
T Consensus 11 ~~~~~~l~y~~~g~~~~~~lvllHG~~~~~~~~-----------------~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~ 73 (306)
T TIGR01249 11 VSDNHQLYYEQSGNPDGKPVVFLHGGPGSGTDP-----------------GCRRFFDPETYRIVLFDQRGCGKSTPHACL 73 (306)
T ss_pred cCCCcEEEEEECcCCCCCEEEEECCCCCCCCCH-----------------HHHhccCccCCEEEEECCCCCCCCCCCCCc
Confidence 346788888664333 34589999986664321 122334457999999999997665321
Q ss_pred ---cHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 491 ---ERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 491 ---e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
...++.+.+..+.+..++ .+++++|+||||++++.++.++| +.+++
T Consensus 74 ~~~~~~~~~~dl~~l~~~l~~--~~~~lvG~S~GG~ia~~~a~~~p~~v~~lv 124 (306)
T TIGR01249 74 EENTTWDLVADIEKLREKLGI--KNWLVFGGSWGSTLALAYAQTHPEVVTGLV 124 (306)
T ss_pred ccCCHHHHHHHHHHHHHHcCC--CCEEEEEECHHHHHHHHHHHHChHhhhhhe
Confidence 234455555666666654 47999999999999999998875 55544
No 64
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=98.37 E-value=1.3e-06 Score=88.59 Aligned_cols=89 Identities=17% Similarity=0.172 Sum_probs=62.1
Q ss_pred ceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCc---ccHHHHHHHHHHHHHHc
Q 040989 430 KAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLG---EERLVVREIIRWWVERH 506 (700)
Q Consensus 430 r~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~---~e~~~v~a~l~~~~~~~ 506 (700)
+++||++||.+++... |. .++..+ .+|.|+++|.+|++.+.. .......+-+..+.++.
T Consensus 2 ~p~vvllHG~~~~~~~-w~---------------~~~~~l--~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~~ 63 (242)
T PRK11126 2 LPWLVFLHGLLGSGQD-WQ---------------PVGEAL--PDYPRLYIDLPGHGGSAAISVDGFADVSRLLSQTLQSY 63 (242)
T ss_pred CCEEEEECCCCCChHH-HH---------------HHHHHc--CCCCEEEecCCCCCCCCCccccCHHHHHHHHHHHHHHc
Confidence 3579999999888753 33 244544 479999999999776532 12333333344445555
Q ss_pred CCCCCCEEEEecChhHHHHHHHhhccC---cCeEE
Q 040989 507 KLEKLPLVALGASSGGYFVSALAKGLR---FSSIA 538 (700)
Q Consensus 507 ~l~~~pl~l~G~S~GG~~a~~la~~~~---~~glv 538 (700)
+ ..|++++||||||.+|+.+|.+++ +++++
T Consensus 64 ~--~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lv 96 (242)
T PRK11126 64 N--ILPYWLVGYSLGGRIAMYYACQGLAGGLCGLI 96 (242)
T ss_pred C--CCCeEEEEECHHHHHHHHHHHhCCcccccEEE
Confidence 3 469999999999999999999874 55544
No 65
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.36 E-value=1.7e-06 Score=91.61 Aligned_cols=97 Identities=16% Similarity=0.201 Sum_probs=69.5
Q ss_pred CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHH-CCcEEEEEcCCCCcCCC-c-------ccHHHHHHH
Q 040989 428 SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALS-RGFAIITISSAGRCWTL-G-------EERLVVREI 498 (700)
Q Consensus 428 ~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~-~GyaV~avd~~g~~w~~-~-------~e~~~v~a~ 498 (700)
..++++|++||++++....|. ..+...++. .+|.|+++|.++..... . .-..++.++
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~--------------~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~ 99 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWI--------------SDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKF 99 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHH--------------HHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHH
Confidence 347899999999888633332 124554554 58999999998653221 1 112456777
Q ss_pred HHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 499 IRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 499 l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
++.+.++.++...+++++||||||.+|..+|..++ +..++
T Consensus 100 l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv 141 (275)
T cd00707 100 LDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRIT 141 (275)
T ss_pred HHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeE
Confidence 88887776777789999999999999999998875 55554
No 66
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=98.36 E-value=3e-06 Score=94.57 Aligned_cols=92 Identities=20% Similarity=0.282 Sum_probs=62.0
Q ss_pred CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCc-----ccHH----HHHHH
Q 040989 428 SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLG-----EERL----VVREI 498 (700)
Q Consensus 428 ~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~-----~e~~----~v~a~ 498 (700)
..+++|||+||.+++...|+. .... +.++|.|+++|.+|++.+.. .+.. ...+.
T Consensus 103 ~~~p~vvllHG~~~~~~~~~~----------------~~~~-L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~ 165 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFFFR----------------NFDA-LASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDS 165 (402)
T ss_pred CCCCEEEEECCCCcchhHHHH----------------HHHH-HHhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHH
Confidence 346899999999887544332 2333 44579999999998665421 1111 12233
Q ss_pred HHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 499 IRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 499 l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
+..+.+..++ .+++++||||||++++.+|.++| +.+++
T Consensus 166 i~~~~~~l~~--~~~~lvGhS~GG~la~~~a~~~p~~v~~lv 205 (402)
T PLN02894 166 FEEWRKAKNL--SNFILLGHSFGGYVAAKYALKHPEHVQHLI 205 (402)
T ss_pred HHHHHHHcCC--CCeEEEEECHHHHHHHHHHHhCchhhcEEE
Confidence 3455555543 48999999999999999999874 66665
No 67
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.35 E-value=3.1e-06 Score=88.69 Aligned_cols=161 Identities=16% Similarity=0.192 Sum_probs=92.2
Q ss_pred CCeEEEEe--ecC--CC----ceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCC
Q 040989 417 NGTDVIWQ--IPD--SP----KAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTL 488 (700)
Q Consensus 417 ~G~~l~~~--~P~--~p----r~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~ 488 (700)
-|.++-|. +|. +| -|+|+|+||.|+.+.+-...- -.|++ +++-..-+-++-|+||.+---.-..
T Consensus 170 tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l-----~sg~g---aiawa~pedqcfVlAPQy~~if~d~ 241 (387)
T COG4099 170 TGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVL-----SSGIG---AIAWAGPEDQCFVLAPQYNPIFADS 241 (387)
T ss_pred cCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhh-----hcCcc---ceeeecccCceEEEccccccccccc
Confidence 35566554 474 23 399999999999877642210 00111 1111112223444444421100000
Q ss_pred cc--c--H-HHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEEEEEecCCCCCCCCCCCCCCeEEE
Q 040989 489 GE--E--R-LVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIALMIAEGLFDQMDIPEDYPPTLFV 561 (700)
Q Consensus 489 ~~--e--~-~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv~~I~~G~~~~~~~~~~yPP~lf~ 561 (700)
.+ + . ..++.+.+.+.+++.++..+||+.|.|+||++++.|+.++| |+|.+ .|+.|-
T Consensus 242 e~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~-~iaG~~---------------- 304 (387)
T COG4099 242 EEKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAV-PIAGGG---------------- 304 (387)
T ss_pred ccccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheee-eecCCC----------------
Confidence 11 1 1 23344444777888999999999999999999999999987 77754 455543
Q ss_pred ccCCChhHHHHHHHHHHHHHhCCCeeeEEEecCCcCCccccccCCCCCCHHHHHHHHHHHHHcc
Q 040989 562 HMPKDSYRQRKIGEFLVVLRNKGIDVAEIECMEFPLSRNFFTDRIPGLEQANSTKLFELFQEKG 625 (700)
Q Consensus 562 hm~~D~~~~~~i~~~~~~L~~~gvp~~~i~~~~~~v~p~~f~~rdp~I~~~~S~~l~~al~~~g 625 (700)
|... .++.| +.+|.-..|+ ..|+.+|.+.|+=+|..|++.+
T Consensus 305 ----d~v~------lv~~l--k~~piWvfhs-----------~dDkv~Pv~nSrv~y~~lk~~~ 345 (387)
T COG4099 305 ----DRVY------LVRTL--KKAPIWVFHS-----------SDDKVIPVSNSRVLYERLKALD 345 (387)
T ss_pred ----chhh------hhhhh--ccCceEEEEe-----------cCCCccccCcceeehHHHHhhc
Confidence 1000 11111 2455666665 5667788888888888877543
No 68
>PLN02872 triacylglycerol lipase
Probab=98.34 E-value=1.6e-06 Score=96.59 Aligned_cols=105 Identities=17% Similarity=0.259 Sum_probs=74.6
Q ss_pred eeccCCeEE-EEeecC-------CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCC
Q 040989 413 VELRNGTDV-IWQIPD-------SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGR 484 (700)
Q Consensus 413 ~~~~~G~~l-~~~~P~-------~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~ 484 (700)
+.+.||-.| ..++|. .++++||++||...++..|... .| ...+...|+++||.|+++|.||.
T Consensus 49 v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~---------~~-~~sla~~La~~GydV~l~n~RG~ 118 (395)
T PLN02872 49 IQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLN---------SP-EQSLGFILADHGFDVWVGNVRGT 118 (395)
T ss_pred EECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeec---------Cc-ccchHHHHHhCCCCccccccccc
Confidence 356788777 445553 1367999999998887655322 12 23466778899999999999985
Q ss_pred cCC-----------------CcccH-HHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhh
Q 040989 485 CWT-----------------LGEER-LVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAK 530 (700)
Q Consensus 485 ~w~-----------------~~~e~-~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~ 530 (700)
.++ +.+.. .|+.++++++.+.. +.+++++||||||.+++.++.
T Consensus 119 ~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~---~~~v~~VGhS~Gg~~~~~~~~ 179 (395)
T PLN02872 119 RWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT---NSKIFIVGHSQGTIMSLAALT 179 (395)
T ss_pred ccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc---CCceEEEEECHHHHHHHHHhh
Confidence 432 11222 58899999987653 469999999999999985553
No 69
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=98.34 E-value=1.9e-06 Score=93.58 Aligned_cols=107 Identities=13% Similarity=0.137 Sum_probs=66.0
Q ss_pred ccCCeEEEEeecCC-CceEEEEeccCCCCCCc-----------cccCCCCCCCCCCCchHHHHHH---HHHHCCcEEEEE
Q 040989 415 LRNGTDVIWQIPDS-PKAVLFLAHGCNGRAVH-----------FWDRSPNCPNCIGLPEERLLVL---HALSRGFAIITI 479 (700)
Q Consensus 415 ~~~G~~l~~~~P~~-pr~vvv~lHG~~~~~~~-----------~~~~s~~c~~c~glpe~~~~~~---~~~~~GyaV~av 479 (700)
..+|.+++|+.-.+ ..|+ |++||+...... +|.. ++. .|...+|.|+++
T Consensus 42 ~~~~~~l~y~~~G~~~~p~-vll~g~~~~~~~~~~~~~~~~~~~w~~---------------~v~~~~~L~~~~~~Vi~~ 105 (343)
T PRK08775 42 GLEDLRLRYELIGPAGAPV-VFVAGGISAHRHVAATATFPEKGWWEG---------------LVGSGRALDPARFRLLAF 105 (343)
T ss_pred CCCCceEEEEEeccCCCCE-EEEecCCCcccccccccCCCCCCcchh---------------ccCCCCccCccccEEEEE
Confidence 45788898887432 2344 555544444332 4532 222 243568999999
Q ss_pred cCCCCcCCCcc--cHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 480 SSAGRCWTLGE--ERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 480 d~~g~~w~~~~--e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
|.+|++-+.+. ...+..+.+..+.++.+++ .++.++|+||||++|+.+|.++| +.+++
T Consensus 106 Dl~G~g~s~~~~~~~~~~a~dl~~ll~~l~l~-~~~~lvG~SmGG~vA~~~A~~~P~~V~~Lv 167 (343)
T PRK08775 106 DFIGADGSLDVPIDTADQADAIALLLDALGIA-RLHAFVGYSYGALVGLQFASRHPARVRTLV 167 (343)
T ss_pred eCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC-cceEEEEECHHHHHHHHHHHHChHhhheEE
Confidence 99986533221 1233344444566666543 24579999999999999999975 66666
No 70
>PLN02578 hydrolase
Probab=98.32 E-value=4.5e-06 Score=91.17 Aligned_cols=105 Identities=23% Similarity=0.421 Sum_probs=68.4
Q ss_pred ccCCeEEEEeecCCCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCcc----
Q 040989 415 LRNGTDVIWQIPDSPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLGE---- 490 (700)
Q Consensus 415 ~~~G~~l~~~~P~~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~~---- 490 (700)
..+|..+.|....+ .+.||++||.+.+... |.+ +.. .+..+|.|+++|.+|++++-..
T Consensus 72 ~~~~~~i~Y~~~g~-g~~vvliHG~~~~~~~-w~~---------------~~~-~l~~~~~v~~~D~~G~G~S~~~~~~~ 133 (354)
T PLN02578 72 TWRGHKIHYVVQGE-GLPIVLIHGFGASAFH-WRY---------------NIP-ELAKKYKVYALDLLGFGWSDKALIEY 133 (354)
T ss_pred EECCEEEEEEEcCC-CCeEEEECCCCCCHHH-HHH---------------HHH-HHhcCCEEEEECCCCCCCCCCccccc
Confidence 34577777766543 3457899999887543 321 223 3456899999999997775321
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEEE
Q 040989 491 ERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIAL 539 (700)
Q Consensus 491 e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv~ 539 (700)
......+-+..+.++.+ ..|++++|||+||++++.+|.++| +.++++
T Consensus 134 ~~~~~a~~l~~~i~~~~--~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvL 182 (354)
T PLN02578 134 DAMVWRDQVADFVKEVV--KEPAVLVGNSLGGFTALSTAVGYPELVAGVAL 182 (354)
T ss_pred CHHHHHHHHHHHHHHhc--cCCeEEEEECHHHHHHHHHHHhChHhcceEEE
Confidence 12222222223333332 468999999999999999999875 666653
No 71
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=98.31 E-value=3.6e-06 Score=92.26 Aligned_cols=105 Identities=20% Similarity=0.280 Sum_probs=69.5
Q ss_pred cCCe-EEEEeecCC-----CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCc
Q 040989 416 RNGT-DVIWQIPDS-----PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLG 489 (700)
Q Consensus 416 ~~G~-~l~~~~P~~-----pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~ 489 (700)
.+|. +++|..-.+ ..+.|||+||.+.+... |.. ++. .+..+|.|+++|.+|++.+..
T Consensus 68 ~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~-w~~---------------~~~-~L~~~~~via~Dl~G~G~S~~ 130 (360)
T PLN02679 68 WKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPH-WRR---------------NIG-VLAKNYTVYAIDLLGFGASDK 130 (360)
T ss_pred ECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHH-HHH---------------HHH-HHhcCCEEEEECCCCCCCCCC
Confidence 3455 777765322 23679999999887643 321 334 345689999999999776532
Q ss_pred c-----cHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhc-c--CcCeEEE
Q 040989 490 E-----ERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKG-L--RFSSIAL 539 (700)
Q Consensus 490 ~-----e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~-~--~~~glv~ 539 (700)
. ...+..+.+..+.+..+ ..|++++||||||.+++.++.. + ++.++++
T Consensus 131 ~~~~~~~~~~~a~~l~~~l~~l~--~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVL 186 (360)
T PLN02679 131 PPGFSYTMETWAELILDFLEEVV--QKPTVLIGNSVGSLACVIAASESTRDLVRGLVL 186 (360)
T ss_pred CCCccccHHHHHHHHHHHHHHhc--CCCeEEEEECHHHHHHHHHHHhcChhhcCEEEE
Confidence 1 22334444445555554 3589999999999999988864 3 4777664
No 72
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.27 E-value=9.5e-07 Score=76.32 Aligned_cols=55 Identities=24% Similarity=0.479 Sum_probs=45.1
Q ss_pred CeEEEEee--cCC-CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCC
Q 040989 418 GTDVIWQI--PDS-PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTL 488 (700)
Q Consensus 418 G~~l~~~~--P~~-pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~ 488 (700)
|.+|+++. |++ ||++|+++||.+.+...|. .+++.|.+.||+|+++|+||+..+-
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~----------------~~a~~L~~~G~~V~~~D~rGhG~S~ 58 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYA----------------HLAEFLAEQGYAVFAYDHRGHGRSE 58 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHH----------------HHHHHHHhCCCEEEEECCCcCCCCC
Confidence 56776664 766 5999999999999987642 3789999999999999999876653
No 73
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.24 E-value=1.2e-05 Score=77.67 Aligned_cols=133 Identities=19% Similarity=0.223 Sum_probs=85.9
Q ss_pred EEeecC-CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCC---CcCC---Cc----c
Q 040989 422 IWQIPD-SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAG---RCWT---LG----E 490 (700)
Q Consensus 422 ~~~~P~-~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g---~~w~---~~----~ 490 (700)
+|.-|+ ++-++|++.||.|.+-.. |-..+++..+..+|+.|..++..- |-.. .+ +
T Consensus 5 ~~~~pag~~~~tilLaHGAGasmdS--------------t~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t 70 (213)
T COG3571 5 FLFDPAGPAPVTILLAHGAGASMDS--------------TSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGT 70 (213)
T ss_pred cccCCCCCCCEEEEEecCCCCCCCC--------------HHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCcccc
Confidence 344465 457899999999988543 223568889999999999998531 1111 11 0
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhcc--CcCeEEEEEecCC-CCCC---C-C-----CCCCCCe
Q 040989 491 ERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGL--RFSSIALMIAEGL-FDQM---D-I-----PEDYPPT 558 (700)
Q Consensus 491 e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~--~~~glv~~I~~G~-~~~~---~-~-----~~~yPP~ 558 (700)
-...-..++..+++ ++..-|+++.|+||||-+++++|..+ +++++ +|-|+ |+.. + + ..---||
T Consensus 71 ~~~~~~~~~aql~~--~l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L---~clgYPfhppGKPe~~Rt~HL~gl~tPt 145 (213)
T COG3571 71 LNPEYIVAIAQLRA--GLAEGPLIIGGKSMGGRVASMVADELQAPIDGL---VCLGYPFHPPGKPEQLRTEHLTGLKTPT 145 (213)
T ss_pred CCHHHHHHHHHHHh--cccCCceeeccccccchHHHHHHHhhcCCcceE---EEecCccCCCCCcccchhhhccCCCCCe
Confidence 01112223334444 44777999999999999999999875 55554 45554 4543 1 1 2223499
Q ss_pred EEEccCCChhH-HHHH
Q 040989 559 LFVHMPKDSYR-QRKI 573 (700)
Q Consensus 559 lf~hm~~D~~~-~~~i 573 (700)
+|+|+.+|++- ..++
T Consensus 146 li~qGtrD~fGtr~~V 161 (213)
T COG3571 146 LITQGTRDEFGTRDEV 161 (213)
T ss_pred EEeecccccccCHHHH
Confidence 99999999984 3444
No 74
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.23 E-value=5.7e-06 Score=86.28 Aligned_cols=107 Identities=17% Similarity=0.210 Sum_probs=72.0
Q ss_pred EEEEeec-CCCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHH-HHCCcEEEEEcCCCCcCCC---------
Q 040989 420 DVIWQIP-DSPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHA-LSRGFAIITISSAGRCWTL--------- 488 (700)
Q Consensus 420 ~l~~~~P-~~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~-~~~GyaV~avd~~g~~w~~--------- 488 (700)
..|+..| +.+-++++++||.|.++-.|.. +++.+ -+.--.++|+|.|||+-..
T Consensus 63 n~Y~t~~~~t~gpil~l~HG~G~S~LSfA~----------------~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~ 126 (343)
T KOG2564|consen 63 NVYLTLPSATEGPILLLLHGGGSSALSFAI----------------FASELKSKIRCRCLALDLRGHGETKVENEDDLSL 126 (343)
T ss_pred EEEEecCCCCCccEEEEeecCcccchhHHH----------------HHHHHHhhcceeEEEeeccccCccccCChhhcCH
Confidence 3466666 4567899999999999977643 22222 2334456899999986643
Q ss_pred cccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhcc---CcCeEEE-EEecCC
Q 040989 489 GEERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGL---RFSSIAL-MIAEGL 545 (700)
Q Consensus 489 ~~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~---~~~glv~-~I~~G~ 545 (700)
.+...|+-++++.|..+ ..-+++|.||||||+++...|..- .+.|++. =+.+|.
T Consensus 127 eT~~KD~~~~i~~~fge---~~~~iilVGHSmGGaIav~~a~~k~lpsl~Gl~viDVVEgt 184 (343)
T KOG2564|consen 127 ETMSKDFGAVIKELFGE---LPPQIILVGHSMGGAIAVHTAASKTLPSLAGLVVIDVVEGT 184 (343)
T ss_pred HHHHHHHHHHHHHHhcc---CCCceEEEeccccchhhhhhhhhhhchhhhceEEEEEechH
Confidence 22346677777777544 356899999999999998887652 3556542 235553
No 75
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.20 E-value=9.6e-06 Score=86.76 Aligned_cols=102 Identities=25% Similarity=0.415 Sum_probs=76.7
Q ss_pred eeccCCe--EEEEee-cCCC-ceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCC
Q 040989 413 VELRNGT--DVIWQI-PDSP-KAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTL 488 (700)
Q Consensus 413 ~~~~~G~--~l~~~~-P~~p-r~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~ 488 (700)
++..+|. .+.|-. |.++ +|+||++||..++..+-+ -..+...+.++||.|+.++-||.+-..
T Consensus 54 v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y--------------~r~L~~~~~~rg~~~Vv~~~Rgcs~~~ 119 (345)
T COG0429 54 LETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPY--------------ARGLMRALSRRGWLVVVFHFRGCSGEA 119 (345)
T ss_pred EEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcCHH--------------HHHHHHHHHhcCCeEEEEecccccCCc
Confidence 3555554 346666 5555 579999999987764432 256888999999999999999865432
Q ss_pred --------cccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhh
Q 040989 489 --------GEERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAK 530 (700)
Q Consensus 489 --------~~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~ 530 (700)
..+-.|++.+++++++++ ...|++++|.|+||.|.+.+..
T Consensus 120 n~~p~~yh~G~t~D~~~~l~~l~~~~--~~r~~~avG~SLGgnmLa~ylg 167 (345)
T COG0429 120 NTSPRLYHSGETEDIRFFLDWLKARF--PPRPLYAVGFSLGGNMLANYLG 167 (345)
T ss_pred ccCcceecccchhHHHHHHHHHHHhC--CCCceEEEEecccHHHHHHHHH
Confidence 244589999999999987 5789999999999966555543
No 76
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.20 E-value=0.00012 Score=79.80 Aligned_cols=192 Identities=16% Similarity=0.141 Sum_probs=121.9
Q ss_pred eeccCCeEEEEeecC-----CCceEEEEeccCCCCCCc-cccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCC-Cc
Q 040989 413 VELRNGTDVIWQIPD-----SPKAVLFLAHGCNGRAVH-FWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAG-RC 485 (700)
Q Consensus 413 ~~~~~G~~l~~~~P~-----~pr~vvv~lHG~~~~~~~-~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g-~~ 485 (700)
.....|..+..+.|. ..+|+||++||+|.--+. .++ ..+...++.+.+.+-.|+.+|||- --
T Consensus 68 ~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~-----------~y~~~~~~~a~~~~~vvvSVdYRLAPE 136 (336)
T KOG1515|consen 68 IDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSP-----------AYDSFCTRLAAELNCVVVSVDYRLAPE 136 (336)
T ss_pred ecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCc-----------hhHHHHHHHHHHcCeEEEecCcccCCC
Confidence 345556666666664 247999999999876442 111 123446667789999999999984 23
Q ss_pred CCCcccHHHHHHHHHHHHHH----cCCCCCCEEEEecChhHHHHHHHhhccC--------cCeEEEEE--ecC-------
Q 040989 486 WTLGEERLVVREIIRWWVER----HKLEKLPLVALGASSGGYFVSALAKGLR--------FSSIALMI--AEG------- 544 (700)
Q Consensus 486 w~~~~e~~~v~a~l~~~~~~----~~l~~~pl~l~G~S~GG~~a~~la~~~~--------~~glv~~I--~~G------- 544 (700)
.-++...+|.-+++.|+.++ .+.+..++|+.|-|+||.+|..+|.+.. +.|++++. +.|
T Consensus 137 h~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e 216 (336)
T KOG1515|consen 137 HPFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESE 216 (336)
T ss_pred CCCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHH
Confidence 33455567778888887664 4778899999999999999999988742 23333211 111
Q ss_pred ---------------------------CCCCC-------------C-CCCCCCCeEEEccCCChhHHHHHHHHHHHHHhC
Q 040989 545 ---------------------------LFDQM-------------D-IPEDYPPTLFVHMPKDSYRQRKIGEFLVVLRNK 583 (700)
Q Consensus 545 ---------------------------~~~~~-------------~-~~~~yPP~lf~hm~~D~~~~~~i~~~~~~L~~~ 583 (700)
..... + .....||++++..-.|..+.+. ....+.|++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~D~~-~~Y~~~Lkk~ 295 (336)
T KOG1515|consen 217 KQQNLNGSPELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLRDEG-LAYAEKLKKA 295 (336)
T ss_pred HHHhhcCCcchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchhhhhhh-HHHHHHHHHc
Confidence 00000 0 0234678888777788776333 3466778999
Q ss_pred CCeeeEEEec-CCcCCccccccCCCCCCHHHHHHHHHHHH
Q 040989 584 GIDVAEIECM-EFPLSRNFFTDRIPGLEQANSTKLFELFQ 622 (700)
Q Consensus 584 gvp~~~i~~~-~~~v~p~~f~~rdp~I~~~~S~~l~~al~ 622 (700)
|+++..++.+ .+|....|. |. ...+.++.+++.
T Consensus 296 Gv~v~~~~~e~~~H~~~~~~----~~--~~~a~~~~~~i~ 329 (336)
T KOG1515|consen 296 GVEVTLIHYEDGFHGFHILD----PS--SKEAHALMDAIV 329 (336)
T ss_pred CCeEEEEEECCCeeEEEecC----Cc--hhhHHHHHHHHH
Confidence 9999965554 434333322 32 556666666654
No 77
>PRK07581 hypothetical protein; Validated
Probab=98.19 E-value=4.2e-06 Score=90.46 Aligned_cols=111 Identities=14% Similarity=0.036 Sum_probs=71.4
Q ss_pred eccCCeEEEEeecC----CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCc
Q 040989 414 ELRNGTDVIWQIPD----SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLG 489 (700)
Q Consensus 414 ~~~~G~~l~~~~P~----~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~ 489 (700)
+..+|.+++|+.-. ...++||+.||.+++... |.. ..+ ....+...+|-|+++|.+|++.+..
T Consensus 21 ~~~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~-~~~------~~~------~~~~l~~~~~~vi~~D~~G~G~S~~ 87 (339)
T PRK07581 21 ATLPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQD-NEW------LIG------PGRALDPEKYFIIIPNMFGNGLSSS 87 (339)
T ss_pred CCcCCceEEEEecCccCCCCCCEEEEeCCCCCCccc-chh------hcc------CCCccCcCceEEEEecCCCCCCCCC
Confidence 46778888887622 123577777877765433 211 000 0013446799999999999877632
Q ss_pred c----------------cHHHHHHHHHHHHHHcCCCCCC-EEEEecChhHHHHHHHhhccC--cCeEEE
Q 040989 490 E----------------ERLVVREIIRWWVERHKLEKLP-LVALGASSGGYFVSALAKGLR--FSSIAL 539 (700)
Q Consensus 490 ~----------------e~~~v~a~l~~~~~~~~l~~~p-l~l~G~S~GG~~a~~la~~~~--~~glv~ 539 (700)
. -.+++.+....+.+.+++ .+ ..+.|+||||.+|+.+|.++| +.++++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lgi--~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvl 154 (339)
T PRK07581 88 PSNTPAPFNAARFPHVTIYDNVRAQHRLLTEKFGI--ERLALVVGWSMGAQQTYHWAVRYPDMVERAAP 154 (339)
T ss_pred CCCCCCCCCCCCCCceeHHHHHHHHHHHHHHHhCC--CceEEEEEeCHHHHHHHHHHHHCHHHHhhhee
Confidence 1 024444444445566664 36 478999999999999999986 667664
No 78
>PRK05855 short chain dehydrogenase; Validated
Probab=98.18 E-value=7.3e-06 Score=94.11 Aligned_cols=100 Identities=11% Similarity=0.091 Sum_probs=67.3
Q ss_pred eccCCeEEEEeecC-CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCcc--
Q 040989 414 ELRNGTDVIWQIPD-SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLGE-- 490 (700)
Q Consensus 414 ~~~~G~~l~~~~P~-~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~~-- 490 (700)
...+|.+++|+.-. ...+.|||+||.+.+... |.. +...| ..||.|+++|.+|++.+...
T Consensus 8 ~~~~g~~l~~~~~g~~~~~~ivllHG~~~~~~~-w~~---------------~~~~L-~~~~~Vi~~D~~G~G~S~~~~~ 70 (582)
T PRK05855 8 VSSDGVRLAVYEWGDPDRPTVVLVHGYPDNHEV-WDG---------------VAPLL-ADRFRVVAYDVRGAGRSSAPKR 70 (582)
T ss_pred EeeCCEEEEEEEcCCCCCCeEEEEcCCCchHHH-HHH---------------HHHHh-hcceEEEEecCCCCCCCCCCCc
Confidence 34678888777633 236799999999877543 331 33444 78999999999998776311
Q ss_pred ----cHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhc
Q 040989 491 ----ERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKG 531 (700)
Q Consensus 491 ----e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~ 531 (700)
...+..+-+..+.+..+. +.|++++||||||.+++.++..
T Consensus 71 ~~~~~~~~~a~dl~~~i~~l~~-~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 71 TAAYTLARLADDFAAVIDAVSP-DRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred ccccCHHHHHHHHHHHHHHhCC-CCcEEEEecChHHHHHHHHHhC
Confidence 123333333344444442 4589999999999999888766
No 79
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=98.16 E-value=1.2e-05 Score=87.65 Aligned_cols=111 Identities=20% Similarity=0.196 Sum_probs=76.8
Q ss_pred ccCCeEEEEeecC---CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCC----
Q 040989 415 LRNGTDVIWQIPD---SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWT---- 487 (700)
Q Consensus 415 ~~~G~~l~~~~P~---~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~---- 487 (700)
..++.+++.+.|. ..+..||++||...++. .++ +.+...++..|+++||.|+++|.+|+..+
T Consensus 44 ~~~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~~-~~d----------~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~ 112 (350)
T TIGR01836 44 REDKVVLYRYTPVKDNTHKTPLLIVYALVNRPY-MLD----------LQEDRSLVRGLLERGQDVYLIDWGYPDRADRYL 112 (350)
T ss_pred EcCcEEEEEecCCCCcCCCCcEEEeccccccce-ecc----------CCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcC
Confidence 4455666555564 22445899999854431 122 22345689999999999999999875432
Q ss_pred -CcccH-HHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 488 -LGEER-LVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 488 -~~~e~-~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
+..-. .++.++++++.++.+ ..+++++||||||.+++.++...+ +++++
T Consensus 113 ~~~d~~~~~~~~~v~~l~~~~~--~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv 165 (350)
T TIGR01836 113 TLDDYINGYIDKCVDYICRTSK--LDQISLLGICQGGTFSLCYAALYPDKIKNLV 165 (350)
T ss_pred CHHHHHHHHHHHHHHHHHHHhC--CCcccEEEECHHHHHHHHHHHhCchheeeEE
Confidence 11112 357888999988874 568999999999999999988764 55544
No 80
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.15 E-value=6.9e-06 Score=90.71 Aligned_cols=122 Identities=13% Similarity=0.108 Sum_probs=75.3
Q ss_pred eccCCeEEEEee---cC-CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHH---HHHHHCCcEEEEEcCCCCcC
Q 040989 414 ELRNGTDVIWQI---PD-SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLV---LHALSRGFAIITISSAGRCW 486 (700)
Q Consensus 414 ~~~~G~~l~~~~---P~-~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~---~~~~~~GyaV~avd~~g~~w 486 (700)
...+|.+++|+. |. ...+.||++||.+++...+......-. -.|.= ..++ +.++..+|.|+++|.+|++.
T Consensus 28 ~~~~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~-~~~~w--~~~~~~~~~l~~~~~~vi~~Dl~G~~~ 104 (379)
T PRK00175 28 AVLPPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDP-KPGWW--DNMVGPGKPIDTDRYFVICSNVLGGCK 104 (379)
T ss_pred CCcCCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCC-CCcch--hhccCCCCccCccceEEEeccCCCCCC
Confidence 456778888876 22 225789999999988764321000000 00000 0011 23557899999999987532
Q ss_pred -CC------------------cccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEEE
Q 040989 487 -TL------------------GEERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIAL 539 (700)
Q Consensus 487 -~~------------------~~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv~ 539 (700)
+. .-...+..+.+..+.+++++.+ ..+++|+||||.+++.+|.++| +.++++
T Consensus 105 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~-~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl 177 (379)
T PRK00175 105 GSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITR-LAAVVGGSMGGMQALEWAIDYPDRVRSALV 177 (379)
T ss_pred CCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCC-ceEEEEECHHHHHHHHHHHhChHhhhEEEE
Confidence 11 0123455566667777776542 2589999999999999999875 566654
No 81
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=98.09 E-value=2e-05 Score=87.43 Aligned_cols=105 Identities=10% Similarity=-0.005 Sum_probs=73.7
Q ss_pred ccCCeEEEEee-cCCCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCc----
Q 040989 415 LRNGTDVIWQI-PDSPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLG---- 489 (700)
Q Consensus 415 ~~~G~~l~~~~-P~~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~---- 489 (700)
+.+|.+++|.. ....++.|||+||.+.+...| . .++.. +..+|.|+++|.+|++.+..
T Consensus 111 ~~~~~~~~y~~~G~~~~~~ivllHG~~~~~~~w-~---------------~~~~~-L~~~~~Via~DlpG~G~S~~p~~~ 173 (383)
T PLN03084 111 SSDLFRWFCVESGSNNNPPVLLIHGFPSQAYSY-R---------------KVLPV-LSKNYHAIAFDWLGFGFSDKPQPG 173 (383)
T ss_pred cCCceEEEEEecCCCCCCeEEEECCCCCCHHHH-H---------------HHHHH-HhcCCEEEEECCCCCCCCCCCccc
Confidence 46777776654 222357899999998876543 2 13443 45689999999999876532
Q ss_pred ----ccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 490 ----EERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 490 ----~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
-...+..+.+..++++.++ .+++++|+|+||.+++.+|.++| +.+++
T Consensus 174 ~~~~ys~~~~a~~l~~~i~~l~~--~~~~LvG~s~GG~ia~~~a~~~P~~v~~lI 226 (383)
T PLN03084 174 YGFNYTLDEYVSSLESLIDELKS--DKVSLVVQGYFSPPVVKYASAHPDKIKKLI 226 (383)
T ss_pred ccccCCHHHHHHHHHHHHHHhCC--CCceEEEECHHHHHHHHHHHhChHhhcEEE
Confidence 1234555555566666654 47999999999999999999875 66765
No 82
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=98.06 E-value=5.4e-06 Score=91.72 Aligned_cols=108 Identities=20% Similarity=0.421 Sum_probs=71.4
Q ss_pred cCCeEE--EEeecC--CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCc----CC
Q 040989 416 RNGTDV--IWQIPD--SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRC----WT 487 (700)
Q Consensus 416 ~~G~~l--~~~~P~--~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~----w~ 487 (700)
..|.++ |..+|. .|.|+|+++=|.-.-..+++. .+...|..+|+|++.+|-+|-+ |.
T Consensus 172 ~eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~---------------l~~~~l~~rGiA~LtvDmPG~G~s~~~~ 236 (411)
T PF06500_consen 172 FEGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYR---------------LFRDYLAPRGIAMLTVDMPGQGESPKWP 236 (411)
T ss_dssp ETTCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHH---------------HHHCCCHHCT-EEEEE--TTSGGGTTT-
T ss_pred eCCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHH---------------HHHHHHHhCCCEEEEEccCCCcccccCC
Confidence 445555 566786 578999998887766666542 1234588999999999988743 33
Q ss_pred CcccH-HHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhc--cCcCeEE
Q 040989 488 LGEER-LVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKG--LRFSSIA 538 (700)
Q Consensus 488 ~~~e~-~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~--~~~~glv 538 (700)
+..|. .--.++++++...--++..+|.++|.|+||++|.++|.. .++.|++
T Consensus 237 l~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV 290 (411)
T PF06500_consen 237 LTQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVV 290 (411)
T ss_dssp S-S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEE
T ss_pred CCcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEe
Confidence 33332 345688888887767788999999999999999999953 4788865
No 83
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.03 E-value=2.1e-05 Score=82.41 Aligned_cols=99 Identities=25% Similarity=0.284 Sum_probs=73.6
Q ss_pred eecCC--CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCC-cCCCcccHHHHHHHHH
Q 040989 424 QIPDS--PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGR-CWTLGEERLVVREIIR 500 (700)
Q Consensus 424 ~~P~~--pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~-~w~~~~e~~~v~a~l~ 500 (700)
..|.. .=|||||+||+.-.... | ..+.++++.+||.|+++|.... ......+...++++++
T Consensus 9 ~~P~~~g~yPVv~f~~G~~~~~s~---Y-------------s~ll~hvAShGyIVV~~d~~~~~~~~~~~~~~~~~~vi~ 72 (259)
T PF12740_consen 9 YYPSSAGTYPVVLFLHGFLLINSW---Y-------------SQLLEHVASHGYIVVAPDLYSIGGPDDTDEVASAAEVID 72 (259)
T ss_pred EecCCCCCcCEEEEeCCcCCCHHH---H-------------HHHHHHHHhCceEEEEecccccCCCCcchhHHHHHHHHH
Confidence 34654 35999999999844332 2 4588999999999999995442 2333467788999999
Q ss_pred HHHHHc--------CCCCCCEEEEecChhHHHHHHHhhcc-------CcCeEE
Q 040989 501 WWVERH--------KLEKLPLVALGASSGGYFVSALAKGL-------RFSSIA 538 (700)
Q Consensus 501 ~~~~~~--------~l~~~pl~l~G~S~GG~~a~~la~~~-------~~~glv 538 (700)
|+.+.. ..+-..+.+.|||.||-+|..+++.. +|++++
T Consensus 73 Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali 125 (259)
T PF12740_consen 73 WLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALI 125 (259)
T ss_pred HHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEE
Confidence 987643 12335789999999999999998875 577765
No 84
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=98.01 E-value=3.5e-05 Score=85.01 Aligned_cols=102 Identities=21% Similarity=0.305 Sum_probs=77.0
Q ss_pred eccCCeEEEEe--ecC-C-------CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCC
Q 040989 414 ELRNGTDVIWQ--IPD-S-------PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAG 483 (700)
Q Consensus 414 ~~~~G~~l~~~--~P~-~-------pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g 483 (700)
+..||..+... .+. . -.|+||++||..+....-+ -+.++..|.++||-|+.+++||
T Consensus 99 ~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~Y--------------Vr~lv~~a~~~G~r~VVfN~RG 164 (409)
T KOG1838|consen 99 KTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESY--------------VRHLVHEAQRKGYRVVVFNHRG 164 (409)
T ss_pred EeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHH--------------HHHHHHHHHhCCcEEEEECCCC
Confidence 55666666433 222 1 3599999999976654422 2468899999999999999999
Q ss_pred CcCC--------CcccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhc
Q 040989 484 RCWT--------LGEERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKG 531 (700)
Q Consensus 484 ~~w~--------~~~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~ 531 (700)
.+-+ ......|++.+++.+.+++ +..|+|+.|+||||.|.+.+-..
T Consensus 165 ~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~--P~a~l~avG~S~Gg~iL~nYLGE 218 (409)
T KOG1838|consen 165 LGGSKLTTPRLFTAGWTEDLREVVNHIKKRY--PQAPLFAVGFSMGGNILTNYLGE 218 (409)
T ss_pred CCCCccCCCceeecCCHHHHHHHHHHHHHhC--CCCceEEEEecchHHHHHHHhhh
Confidence 3222 1345688999999999998 57799999999999999988554
No 85
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.01 E-value=3.5e-05 Score=86.65 Aligned_cols=95 Identities=17% Similarity=0.183 Sum_probs=66.5
Q ss_pred ceEEEEeccCCCCCC-ccccCCCCCCCCCCCchHHHHHHHHHHC--CcEEEEEcCCCCcCCCcc--------cHHHHHHH
Q 040989 430 KAVLFLAHGCNGRAV-HFWDRSPNCPNCIGLPEERLLVLHALSR--GFAIITISSAGRCWTLGE--------ERLVVREI 498 (700)
Q Consensus 430 r~vvv~lHG~~~~~~-~~~~~s~~c~~c~glpe~~~~~~~~~~~--GyaV~avd~~g~~w~~~~--------e~~~v~a~ 498 (700)
++++|++||++.++. .-|. ..++..++.+ .|.|+++|.+|+..+... -..+++++
T Consensus 41 ~ptvIlIHG~~~s~~~~~w~--------------~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~l 106 (442)
T TIGR03230 41 TKTFIVIHGWTVTGMFESWV--------------PKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKF 106 (442)
T ss_pred CCeEEEECCCCcCCcchhhH--------------HHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHH
Confidence 679999999987642 1131 1245555433 699999999876543211 12456777
Q ss_pred HHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 499 IRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 499 l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
++++.++.++.-.++.|+||||||.+|..+|..++ +..++
T Consensus 107 I~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rIt 148 (442)
T TIGR03230 107 VNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRIT 148 (442)
T ss_pred HHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEE
Confidence 87777777777789999999999999999998764 44444
No 86
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.00 E-value=0.00011 Score=79.83 Aligned_cols=93 Identities=23% Similarity=0.283 Sum_probs=63.5
Q ss_pred CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCc-CCC-----cccHHHHHHHHHHH
Q 040989 429 PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRC-WTL-----GEERLVVREIIRWW 502 (700)
Q Consensus 429 pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~-w~~-----~~e~~~v~a~l~~~ 502 (700)
.++.||++||.+.+. ..|++. ..-|+ + ..|+.|+|+|-.|++ .+. .-...+-..++..+
T Consensus 57 ~~~pvlllHGF~~~~-~~w~~~-----~~~L~------~---~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~ 121 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASS-FSWRRV-----VPLLS------K---AKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRF 121 (326)
T ss_pred CCCcEEEeccccCCc-ccHhhh-----ccccc------c---ccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHH
Confidence 588999999999954 456541 00111 1 227999999999966 332 11234555566666
Q ss_pred HHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 503 VERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 503 ~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
..+.+ ..|+.+.|||+||.+|..+|+.+| +++++
T Consensus 122 ~~~~~--~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv 157 (326)
T KOG1454|consen 122 VKEVF--VEPVSLVGHSLGGIVALKAAAYYPETVDSLV 157 (326)
T ss_pred HHhhc--CcceEEEEeCcHHHHHHHHHHhCccccccee
Confidence 66553 567999999999999999999986 44444
No 87
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=97.99 E-value=1.9e-05 Score=93.97 Aligned_cols=87 Identities=16% Similarity=0.099 Sum_probs=61.2
Q ss_pred CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCC-Cc------------------
Q 040989 429 PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWT-LG------------------ 489 (700)
Q Consensus 429 pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~-~~------------------ 489 (700)
.+++|+++||.+++..+|. .++..|.++||.|+++|++||.-+ +.
T Consensus 448 g~P~VVllHG~~g~~~~~~----------------~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~N 511 (792)
T TIGR03502 448 GWPVVIYQHGITGAKENAL----------------AFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMN 511 (792)
T ss_pred CCcEEEEeCCCCCCHHHHH----------------HHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceec
Confidence 3569999999999876543 367788889999999999875432 21
Q ss_pred ------------ccHHHHHHHHHHHH------HHc----CCCCCCEEEEecChhHHHHHHHhhc
Q 040989 490 ------------EERLVVREIIRWWV------ERH----KLEKLPLVALGASSGGYFVSALAKG 531 (700)
Q Consensus 490 ------------~e~~~v~a~l~~~~------~~~----~l~~~pl~l~G~S~GG~~a~~la~~ 531 (700)
.-+.|+..+...+. +++ .++..|++++||||||.++..++..
T Consensus 512 l~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 512 LASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred cccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 01133443433333 111 2567899999999999999999874
No 88
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=97.96 E-value=3.2e-05 Score=81.47 Aligned_cols=115 Identities=18% Similarity=0.169 Sum_probs=76.7
Q ss_pred CCeEEEEe--ec--C--CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCC---
Q 040989 417 NGTDVIWQ--IP--D--SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWT--- 487 (700)
Q Consensus 417 ~G~~l~~~--~P--~--~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~--- 487 (700)
||.+|... +| . .|.|+||+.|+++.......... ...|........++++||+|+.+|.||+.-|
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~------~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~ 74 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLA------GANPGPPSARRPFAERGYAVVVQDVRGTGGSEGE 74 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHH------TTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchh------hhhcccchhHHHHHhCCCEEEEECCcccccCCCc
Confidence 67778554 48 4 46899999999986532221110 0011111122349999999999999984332
Q ss_pred ----CcccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 488 ----LGEERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 488 ----~~~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
...|..|..++|+|+.++ ....-+|-++|.|.+|..++.+|..-+ +++++
T Consensus 75 ~~~~~~~e~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~ 130 (272)
T PF02129_consen 75 FDPMSPNEAQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIV 130 (272)
T ss_dssp B-TTSHHHHHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEE
T ss_pred cccCChhHHHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEE
Confidence 346789999999999887 666668999999999999999998543 44443
No 89
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=97.94 E-value=2e-05 Score=85.41 Aligned_cols=178 Identities=17% Similarity=0.173 Sum_probs=96.3
Q ss_pred eccCCeEE--EEeecC---CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCc---
Q 040989 414 ELRNGTDV--IWQIPD---SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRC--- 485 (700)
Q Consensus 414 ~~~~G~~l--~~~~P~---~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~--- 485 (700)
.+.+|..+ ++.+|. .+.|+||.+||+++....+. -...+..+||+|+++|.+|..
T Consensus 62 ~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~-----------------~~~~~a~~G~~vl~~d~rGqg~~~ 124 (320)
T PF05448_consen 62 ESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPF-----------------DLLPWAAAGYAVLAMDVRGQGGRS 124 (320)
T ss_dssp EEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHH-----------------HHHHHHHTT-EEEEE--TTTSSSS
T ss_pred EccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcc-----------------cccccccCCeEEEEecCCCCCCCC
Confidence 45567677 334587 34699999999998854322 124578999999999988632
Q ss_pred -------------CC---C-c-cc-------HHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhcc-CcCeEEE
Q 040989 486 -------------WT---L-G-EE-------RLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGL-RFSSIAL 539 (700)
Q Consensus 486 -------------w~---~-~-~e-------~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~-~~~glv~ 539 (700)
|. . + .+ ..|+..+++.+...-.+++.+|.++|.|+||++++.+|.-. ++.+++.
T Consensus 125 ~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~rv~~~~~ 204 (320)
T PF05448_consen 125 PDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPRVKAAAA 204 (320)
T ss_dssp -B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST-SEEEE
T ss_pred CCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCccccEEEe
Confidence 10 0 1 11 25666667777766677899999999999999999998754 4666543
Q ss_pred EEecCCCCCC------CC-CCCCCCeEEEccC-CCh--hHHHHHHHH------HHHHHhCCCeeeEEEecCCcCCccccc
Q 040989 540 MIAEGLFDQM------DI-PEDYPPTLFVHMP-KDS--YRQRKIGEF------LVVLRNKGIDVAEIECMEFPLSRNFFT 603 (700)
Q Consensus 540 ~I~~G~~~~~------~~-~~~yPP~lf~hm~-~D~--~~~~~i~~~------~~~L~~~gvp~~~i~~~~~~v~p~~f~ 603 (700)
.+. .++-. .. ...|+ -+.-... .|+ ....++.+. +...+...+|+.....
T Consensus 205 ~vP--~l~d~~~~~~~~~~~~~y~-~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~g----------- 270 (320)
T PF05448_consen 205 DVP--FLCDFRRALELRADEGPYP-EIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIKCPVLFSVG----------- 270 (320)
T ss_dssp ESE--SSSSHHHHHHHT--STTTH-HHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEE-----------
T ss_pred cCC--CccchhhhhhcCCccccHH-HHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEe-----------
Confidence 221 11110 00 11221 0000000 111 111222222 3344666788877766
Q ss_pred cCCCCCCHHHHHHHHHHHH
Q 040989 604 DRIPGLEQANSTKLFELFQ 622 (700)
Q Consensus 604 ~rdp~I~~~~S~~l~~al~ 622 (700)
-.|+..|+...-++|+++.
T Consensus 271 l~D~~cPP~t~fA~yN~i~ 289 (320)
T PF05448_consen 271 LQDPVCPPSTQFAAYNAIP 289 (320)
T ss_dssp TT-SSS-HHHHHHHHCC--
T ss_pred cCCCCCCchhHHHHHhccC
Confidence 5789999999999999887
No 90
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=97.91 E-value=0.00013 Score=87.69 Aligned_cols=107 Identities=19% Similarity=0.229 Sum_probs=78.4
Q ss_pred eccCCeEEEEee--cCC-----CceEEEEeccCCCC--CCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCC-
Q 040989 414 ELRNGTDVIWQI--PDS-----PKAVLFLAHGCNGR--AVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAG- 483 (700)
Q Consensus 414 ~~~~G~~l~~~~--P~~-----pr~vvv~lHG~~~~--~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g- 483 (700)
...+|..+.+++ |++ .-|+||..||+-++ ....+.-+ . -...+..+||+|+.+|+||
T Consensus 503 i~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~---------~----~~~~~s~~g~~v~~vd~RGs 569 (755)
T KOG2100|consen 503 IEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVD---------W----NEVVVSSRGFAVLQVDGRGS 569 (755)
T ss_pred EEeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEec---------H----HHHhhccCCeEEEEEcCCCc
Confidence 445888886664 752 24899999999652 22223211 1 1235889999999999997
Q ss_pred --CcCCC---------cccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC
Q 040989 484 --RCWTL---------GEERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR 533 (700)
Q Consensus 484 --~~w~~---------~~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~ 533 (700)
.+|.+ ..|+.|...+++.+.+.+-+|..++.++|.|-||++++.+....+
T Consensus 570 ~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~ 630 (755)
T KOG2100|consen 570 GGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDP 630 (755)
T ss_pred CCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCc
Confidence 33332 256788888888998888789999999999999999999988763
No 91
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.88 E-value=9e-05 Score=74.69 Aligned_cols=149 Identities=19% Similarity=0.164 Sum_probs=88.8
Q ss_pred ceEEEEeccCCCCCCccccC---------CCCCCC-------CCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCcccHH
Q 040989 430 KAVLFLAHGCNGRAVHFWDR---------SPNCPN-------CIGLPEERLLVLHALSRGFAIITISSAGRCWTLGEERL 493 (700)
Q Consensus 430 r~vvv~lHG~~~~~~~~~~~---------s~~c~~-------c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~~e~~ 493 (700)
+++|||+||.+.++.++.+. .-.||. +.+-+ ....+|.+.-++..+.- -.....
T Consensus 3 ~atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~--------~~~aWfd~~~~~~~~~~--d~~~~~ 72 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGA--------FMNAWFDIMELSSDAPE--DEEGLH 72 (206)
T ss_pred eEEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCC--------cccceecceeeCcccch--hhhHHH
Confidence 68999999999998875321 112221 11111 11125555555544321 112223
Q ss_pred HHHHHHHHHHHH---cCCCCCCEEEEecChhHHHHHHHhhccC--cCeEEEEEecCCCCC-------CCCCCCCCCeEEE
Q 040989 494 VVREIIRWWVER---HKLEKLPLVALGASSGGYFVSALAKGLR--FSSIALMIAEGLFDQ-------MDIPEDYPPTLFV 561 (700)
Q Consensus 494 ~v~a~l~~~~~~---~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv~~I~~G~~~~-------~~~~~~yPP~lf~ 561 (700)
...+.+.++.++ .|++..++++.|+||||++++..+..++ .+|+. -.+|-+.. .-....++|.+..
T Consensus 73 ~aa~~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~--~~s~~~p~~~~~~~~~~~~~~~~~i~~~ 150 (206)
T KOG2112|consen 73 RAADNIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIF--ALSGFLPRASIGLPGWLPGVNYTPILLC 150 (206)
T ss_pred HHHHHHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceee--ccccccccchhhccCCccccCcchhhee
Confidence 344444455433 3777788999999999999999999874 22321 12222221 1113358999999
Q ss_pred ccCCChhH-HHHHHHHHHHHHhCCCeeeEE
Q 040989 562 HMPKDSYR-QRKIGEFLVVLRNKGIDVAEI 590 (700)
Q Consensus 562 hm~~D~~~-~~~i~~~~~~L~~~gvp~~~i 590 (700)
||..|+.. ..--....+.|+..|+++...
T Consensus 151 Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~ 180 (206)
T KOG2112|consen 151 HGTADPLVPFRFGEKSAQFLKSLGVRVTFK 180 (206)
T ss_pred cccCCceeehHHHHHHHHHHHHcCCceeee
Confidence 99999875 344455678889999994443
No 92
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.88 E-value=2.6e-05 Score=83.93 Aligned_cols=91 Identities=22% Similarity=0.319 Sum_probs=63.8
Q ss_pred CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCC----Cc----ccHHHHHHHHH
Q 040989 429 PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWT----LG----EERLVVREIIR 500 (700)
Q Consensus 429 pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~----~~----~e~~~v~a~l~ 500 (700)
-+.-+|++||+|..-+-|+. .-..+...+.|+|+|..|-+.+ ++ .......+.++
T Consensus 89 ~~~plVliHGyGAg~g~f~~-----------------Nf~~La~~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE 151 (365)
T KOG4409|consen 89 NKTPLVLIHGYGAGLGLFFR-----------------NFDDLAKIRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIE 151 (365)
T ss_pred CCCcEEEEeccchhHHHHHH-----------------hhhhhhhcCceEEecccCCCCCCCCCCCCCcccchHHHHHHHH
Confidence 36678899999776544432 1223334999999999874433 11 11234456677
Q ss_pred HHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 501 WWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 501 ~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
.|+...++. ..+|+|||+|||++..+|.++| +.-|+
T Consensus 152 ~WR~~~~L~--KmilvGHSfGGYLaa~YAlKyPerV~kLi 189 (365)
T KOG4409|consen 152 QWRKKMGLE--KMILVGHSFGGYLAAKYALKYPERVEKLI 189 (365)
T ss_pred HHHHHcCCc--ceeEeeccchHHHHHHHHHhChHhhceEE
Confidence 888888776 7899999999999999999986 44444
No 93
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=97.86 E-value=0.00015 Score=76.43 Aligned_cols=175 Identities=18% Similarity=0.178 Sum_probs=111.2
Q ss_pred EEEEe--ecC-CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCcc-----c
Q 040989 420 DVIWQ--IPD-SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLGE-----E 491 (700)
Q Consensus 420 ~l~~~--~P~-~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~~-----e 491 (700)
+..|+ .|. +|+|+||-+|||-++-.||- .++..|.++|+.++.+.++|-....+. -
T Consensus 22 ~a~y~D~~~~gs~~gTVv~~hGsPGSH~DFk----------------Yi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~ 85 (297)
T PF06342_consen 22 QAVYEDSLPSGSPLGTVVAFHGSPGSHNDFK----------------YIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYT 85 (297)
T ss_pred EEEEEecCCCCCCceeEEEecCCCCCccchh----------------hhhhHHHHcCeEEEEeCCCCCCCCCCCcccccC
Confidence 44444 364 67999999999988877773 267889999999999999984443211 1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccCcCeEEEEEecCCCCC---CCC----------CCCCC-C
Q 040989 492 RLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLRFSSIALMIAEGLFDQ---MDI----------PEDYP-P 557 (700)
Q Consensus 492 ~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~~~glv~~I~~G~~~~---~~~----------~~~yP-P 557 (700)
...-..-++.+.++.++. ..++++|||.|+--|+.+|..+|..|++ ||-+-.|.. +.+ -.-+| |
T Consensus 86 n~er~~~~~~ll~~l~i~-~~~i~~gHSrGcenal~la~~~~~~g~~-lin~~G~r~HkgIrp~~r~~~i~~l~~~lp~~ 163 (297)
T PF06342_consen 86 NEERQNFVNALLDELGIK-GKLIFLGHSRGCENALQLAVTHPLHGLV-LINPPGLRPHKGIRPLSRMETINYLYDLLPRF 163 (297)
T ss_pred hHHHHHHHHHHHHHcCCC-CceEEEEeccchHHHHHHHhcCccceEE-EecCCccccccCcCHHHHHHHHHHHHHHhhHH
Confidence 123344555667777877 5899999999999999999999987766 443311111 100 00011 0
Q ss_pred eE---E-----EccCC--ChhH------------HHHHHHHHHHHHhCCCeeeEEEecCCcCCccccccCCCCCCHHHHH
Q 040989 558 TL---F-----VHMPK--DSYR------------QRKIGEFLVVLRNKGIDVAEIECMEFPLSRNFFTDRIPGLEQANST 615 (700)
Q Consensus 558 ~l---f-----~hm~~--D~~~------------~~~i~~~~~~L~~~gvp~~~i~~~~~~v~p~~f~~rdp~I~~~~S~ 615 (700)
++ + ..+-| |-.. .+.-.++++.|+++.+++.+.- +.+|-+|..+.+.
T Consensus 164 ~~~~i~~~~y~~iG~KV~~GeeA~na~r~m~~~df~~q~~~I~~ln~~~ikvli~y-----------gg~DhLIEeeI~~ 232 (297)
T PF06342_consen 164 IINAIMYFYYRMIGFKVSDGEEAINAMRSMQNCDFEEQKEYIDKLNKKPIKVLIAY-----------GGKDHLIEEEISF 232 (297)
T ss_pred HHHHHHHHHHHHhCeeecChHHHHHHHHHHHhcCHHHHHHHHHHhccCCCcEEEEE-----------cCcchhhHHHHHH
Confidence 00 0 00111 1111 1122345677777777777664 4789999999998
Q ss_pred HHHHHHHH
Q 040989 616 KLFELFQE 623 (700)
Q Consensus 616 ~l~~al~~ 623 (700)
.+...++.
T Consensus 233 E~a~~f~~ 240 (297)
T PF06342_consen 233 EFAMKFKG 240 (297)
T ss_pred HHHHHhCC
Confidence 88776653
No 94
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.84 E-value=0.00054 Score=76.89 Aligned_cols=159 Identities=14% Similarity=0.059 Sum_probs=96.0
Q ss_pred eEEEEeecC----CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcE----EEEEcCCC---CcCC
Q 040989 419 TDVIWQIPD----SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFA----IITISSAG---RCWT 487 (700)
Q Consensus 419 ~~l~~~~P~----~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~Gya----V~avd~~g---~~w~ 487 (700)
++++.+.|. .+.|||+++||..... . .++ ..+...|.+.|.. |+.+|..+ +...
T Consensus 194 r~v~VY~P~~y~~~~~PvlyllDG~~w~~-----~-------~~~---~~~ld~li~~g~i~P~ivV~id~~~~~~R~~e 258 (411)
T PRK10439 194 RRVWIYTTGDAAPEERPLAILLDGQFWAE-----S-------MPV---WPALDSLTHRGQLPPAVYLLIDAIDTTHRSQE 258 (411)
T ss_pred eEEEEEECCCCCCCCCCEEEEEECHHhhh-----c-------CCH---HHHHHHHHHcCCCCceEEEEECCCCccccccc
Confidence 456666775 2469999999964321 1 011 1245567778854 56777642 2111
Q ss_pred CcccH----HHHHHHHHHHHHHcCC--CCCCEEEEecChhHHHHHHHhhccC--cCeEEEEEecCCCC--C-----C---
Q 040989 488 LGEER----LVVREIIRWWVERHKL--EKLPLVALGASSGGYFVSALAKGLR--FSSIALMIAEGLFD--Q-----M--- 549 (700)
Q Consensus 488 ~~~e~----~~v~a~l~~~~~~~~l--~~~pl~l~G~S~GG~~a~~la~~~~--~~glv~~I~~G~~~--~-----~--- 549 (700)
.+... ..+..++-++.++++. +....+++|+||||.+|+.+|.++| |++++. .+|.|- . .
T Consensus 259 l~~~~~f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s--~Sgs~ww~~~~~~~~~~l 336 (411)
T PRK10439 259 LPCNADFWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLS--QSGSFWWPHRGGQQEGVL 336 (411)
T ss_pred CCchHHHHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEE--eccceecCCccCCchhHH
Confidence 11111 2234555566666655 5567899999999999999999975 777553 344431 0 0
Q ss_pred --CC-C---CCCC-CeEEEccCCChhHHHHHHHHHHHHHhCCCeeeEEEecC
Q 040989 550 --DI-P---EDYP-PTLFVHMPKDSYRQRKIGEFLVVLRNKGIDVAEIECME 594 (700)
Q Consensus 550 --~~-~---~~yP-P~lf~hm~~D~~~~~~i~~~~~~L~~~gvp~~~i~~~~ 594 (700)
.+ . ...+ ...+..|..|........+..+.|++.|+++.+....-
T Consensus 337 ~~~l~~~~~~~~~lr~~i~~G~~E~~~~~~~~~l~~~L~~~G~~~~~~~~~G 388 (411)
T PRK10439 337 LEQLKAGEVSARGLRIVLEAGRREPMIMRANQALYAQLHPAGHSVFWRQVDG 388 (411)
T ss_pred HHHHHhcccCCCCceEEEeCCCCCchHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 01 1 1122 23334677776555566777889999999988876643
No 95
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=97.77 E-value=0.00026 Score=70.01 Aligned_cols=160 Identities=18% Similarity=0.263 Sum_probs=86.8
Q ss_pred EEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCcccHHHHHHHHHHHHHHcCCCCCC
Q 040989 433 LFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLGEERLVVREIIRWWVERHKLEKLP 512 (700)
Q Consensus 433 vv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~~e~~~v~a~l~~~~~~~~l~~~p 512 (700)
|+++||++++..+-|.. .+.+++-.. +.|-.++. +..++.+=++.+.+..+-...+
T Consensus 1 v~IvhG~~~s~~~HW~~--------------wl~~~l~~~-~~V~~~~~---------~~P~~~~W~~~l~~~i~~~~~~ 56 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQP--------------WLERQLENS-VRVEQPDW---------DNPDLDEWVQALDQAIDAIDEP 56 (171)
T ss_dssp EEEE--TTSSTTTSTHH--------------HHHHHHTTS-EEEEEC-----------TS--HHHHHHHHHHCCHC-TTT
T ss_pred CEEeCCCCCCCccHHHH--------------HHHHhCCCC-eEEecccc---------CCCCHHHHHHHHHHHHhhcCCC
Confidence 68999999998877753 244445444 55444332 1123333233333333334568
Q ss_pred EEEEecChhHHHHHHHh-hc--cCcCeEEEEEecCCCCCCCCCCCCCCeE--EEccCCChhHHHHHHHHHHHHHhCCCee
Q 040989 513 LVALGASSGGYFVSALA-KG--LRFSSIALMIAEGLFDQMDIPEDYPPTL--FVHMPKDSYRQRKIGEFLVVLRNKGIDV 587 (700)
Q Consensus 513 l~l~G~S~GG~~a~~la-~~--~~~~glv~~I~~G~~~~~~~~~~yPP~l--f~hm~~D~~~~~~i~~~~~~L~~~gvp~ 587 (700)
+++.|||+|+..++.++ .. .++.|++ +=++|...+ ....+|.+ |...+.++ ..+++
T Consensus 57 ~ilVaHSLGc~~~l~~l~~~~~~~v~g~l---LVAp~~~~~-~~~~~~~~~~f~~~p~~~---------------l~~~~ 117 (171)
T PF06821_consen 57 TILVAHSLGCLTALRWLAEQSQKKVAGAL---LVAPFDPDD-PEPFPPELDGFTPLPRDP---------------LPFPS 117 (171)
T ss_dssp EEEEEETHHHHHHHHHHHHTCCSSEEEEE---EES--SCGC-HHCCTCGGCCCTTSHCCH---------------HHCCE
T ss_pred eEEEEeCHHHHHHHHHHhhcccccccEEE---EEcCCCccc-ccchhhhccccccCcccc---------------cCCCe
Confidence 99999999999999999 33 3555543 333333210 01222221 11122221 13444
Q ss_pred eEEEecCCcCCccccccCCCCCCHHHHHHHHHHHHH-cccccCCCCcccCCchhHHHHHH
Q 040989 588 AEIECMEFPLSRNFFTDRIPGLEQANSTKLFELFQE-KGFIDENGYMRSDGRRTRWKEAL 646 (700)
Q Consensus 588 ~~i~~~~~~v~p~~f~~rdp~I~~~~S~~l~~al~~-~g~ld~~g~l~~d~r~~~w~~~l 646 (700)
..+. +++||.++.+.+..+.+.|.. .-.+-+.|.+..+..+..|-..+
T Consensus 118 ~via-----------S~nDp~vp~~~a~~~A~~l~a~~~~~~~~GHf~~~~G~~~~p~~~ 166 (171)
T PF06821_consen 118 IVIA-----------SDNDPYVPFERAQRLAQRLGAELIILGGGGHFNAASGFGPWPEGL 166 (171)
T ss_dssp EEEE-----------ETTBSSS-HHHHHHHHHHHT-EEEEETS-TTSSGGGTHSS-HHHH
T ss_pred EEEE-----------cCCCCccCHHHHHHHHHHcCCCeEECCCCCCcccccCCCchHHHH
Confidence 3333 589999999999999999984 45555688887777777666544
No 96
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=97.76 E-value=6.9e-05 Score=77.87 Aligned_cols=100 Identities=26% Similarity=0.323 Sum_probs=74.6
Q ss_pred eecC--CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCC-cccHHHHHHHHH
Q 040989 424 QIPD--SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTL-GEERLVVREIIR 500 (700)
Q Consensus 424 ~~P~--~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~-~~e~~~v~a~l~ 500 (700)
..|. ..-|+|+|+||+.-... |+ ..+.++...+||.|+|++.-...+.. ..|+++++++++
T Consensus 38 ~tP~~~G~yPVilF~HG~~l~ns-~Y---------------s~lL~HIASHGfIVVAPQl~~~~~p~~~~Ei~~aa~V~~ 101 (307)
T PF07224_consen 38 VTPSEAGTYPVILFLHGFNLYNS-FY---------------SQLLAHIASHGFIVVAPQLYTLFPPDGQDEIKSAASVIN 101 (307)
T ss_pred ecCCcCCCccEEEEeechhhhhH-HH---------------HHHHHHHhhcCeEEEechhhcccCCCchHHHHHHHHHHH
Confidence 3454 34689999999976643 32 23788999999999999987655532 356788999999
Q ss_pred HHHHHc--------CCCCCCEEEEecChhHHHHHHHhhcc----CcCeEEE
Q 040989 501 WWVERH--------KLEKLPLVALGASSGGYFVSALAKGL----RFSSIAL 539 (700)
Q Consensus 501 ~~~~~~--------~l~~~pl~l~G~S~GG~~a~~la~~~----~~~glv~ 539 (700)
|+.+.+ ..+-..+.+.|||.||-.|..||+.+ +|+++++
T Consensus 102 WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIG 152 (307)
T PF07224_consen 102 WLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIG 152 (307)
T ss_pred HHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheec
Confidence 997653 11335679999999999888888765 5888764
No 97
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.74 E-value=0.00025 Score=72.59 Aligned_cols=147 Identities=17% Similarity=0.222 Sum_probs=91.8
Q ss_pred HHHHHHHHHCCcEEEEEcCCCCcCCCc----------cc--HHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhh
Q 040989 463 RLLVLHALSRGFAIITISSAGRCWTLG----------EE--RLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAK 530 (700)
Q Consensus 463 ~~~~~~~~~~GyaV~avd~~g~~w~~~----------~e--~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~ 530 (700)
+.++..++++||.|+.+|+||-.-+.+ .| ..|..++|+++.+.. ++.|+|.+|||+||-..-.++.
T Consensus 47 RrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~--~~~P~y~vgHS~GGqa~gL~~~ 124 (281)
T COG4757 47 RRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKAL--PGHPLYFVGHSFGGQALGLLGQ 124 (281)
T ss_pred HHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhC--CCCceEEeeccccceeeccccc
Confidence 358999999999999999998433211 22 256778888887765 6899999999999998888876
Q ss_pred ccCcCeEEEE--E--ecCCCCC-----------------------C-----CCCCCCCCeEE------EccCCChhHHHH
Q 040989 531 GLRFSSIALM--I--AEGLFDQ-----------------------M-----DIPEDYPPTLF------VHMPKDSYRQRK 572 (700)
Q Consensus 531 ~~~~~glv~~--I--~~G~~~~-----------------------~-----~~~~~yPP~lf------~hm~~D~~~~~~ 572 (700)
+-..++..+. . .+|...- + ....+-|-+.| .-++++-+...+
T Consensus 125 ~~k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~ 204 (281)
T COG4757 125 HPKYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPA 204 (281)
T ss_pred CcccceeeEeccccccccchhhhhcccceeeccccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChh
Confidence 6433221110 0 1111000 0 01112222211 112222222334
Q ss_pred HHHHHHHHHhCCCeeeEEEecCCcCCccccccCCCCCCHHHHHHHHHHHH
Q 040989 573 IGEFLVVLRNKGIDVAEIECMEFPLSRNFFTDRIPGLEQANSTKLFELFQ 622 (700)
Q Consensus 573 i~~~~~~L~~~gvp~~~i~~~~~~v~p~~f~~rdp~I~~~~S~~l~~al~ 622 (700)
.....+..+...+|+..+.+ ..||-.|.+--.++.....
T Consensus 205 ~~~~~q~yaaVrtPi~~~~~-----------~DD~w~P~As~d~f~~~y~ 243 (281)
T COG4757 205 MRNYRQVYAAVRTPITFSRA-----------LDDPWAPPASRDAFASFYR 243 (281)
T ss_pred HhHHHHHHHHhcCceeeecc-----------CCCCcCCHHHHHHHHHhhh
Confidence 45556666778888887776 6789999999999988877
No 98
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=97.68 E-value=0.00012 Score=94.85 Aligned_cols=91 Identities=15% Similarity=0.145 Sum_probs=66.0
Q ss_pred CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCc------------ccHHHHH
Q 040989 429 PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLG------------EERLVVR 496 (700)
Q Consensus 429 pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~------------~e~~~v~ 496 (700)
.++.|||+||.+++...| . .+... +..+|.|+++|.+|++++.. ...+++.
T Consensus 1370 ~~~~vVllHG~~~s~~~w-~---------------~~~~~-L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a 1432 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDW-I---------------PIMKA-ISGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVA 1432 (1655)
T ss_pred CCCeEEEECCCCCCHHHH-H---------------HHHHH-HhCCCEEEEEcCCCCCCCCCccccccccccccCCHHHHH
Confidence 357999999999997653 2 13443 45679999999999877531 1234555
Q ss_pred HHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 497 EIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 497 a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
+.+..+.++.+ ..+++++||||||.+++.+|.++| +.+++
T Consensus 1433 ~~l~~ll~~l~--~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lV 1474 (1655)
T PLN02980 1433 DLLYKLIEHIT--PGKVTLVGYSMGARIALYMALRFSDKIEGAV 1474 (1655)
T ss_pred HHHHHHHHHhC--CCCEEEEEECHHHHHHHHHHHhChHhhCEEE
Confidence 55556666654 458999999999999999999875 66655
No 99
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.67 E-value=0.00024 Score=69.33 Aligned_cols=100 Identities=21% Similarity=0.224 Sum_probs=64.4
Q ss_pred CeEEEEeecCCCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCC--cccHHHH
Q 040989 418 GTDVIWQIPDSPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTL--GEERLVV 495 (700)
Q Consensus 418 G~~l~~~~P~~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~--~~e~~~v 495 (700)
+.++.|.....+.+.++++||...+...+... .........+ |.|+++|.+|+..+. .......
T Consensus 9 ~~~~~~~~~~~~~~~i~~~hg~~~~~~~~~~~-------------~~~~~~~~~~-~~~~~~d~~g~g~s~~~~~~~~~~ 74 (282)
T COG0596 9 GVRLAYREAGGGGPPLVLLHGFPGSSSVWRPV-------------FKVLPALAAR-YRVIAPDLRGHGRSDPAGYSLSAY 74 (282)
T ss_pred CeEEEEeecCCCCCeEEEeCCCCCchhhhHHH-------------HHHhhccccc-eEEEEecccCCCCCCcccccHHHH
Confidence 34454544322255999999998886554320 0011111223 999999999877765 2222222
Q ss_pred HHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC
Q 040989 496 REIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR 533 (700)
Q Consensus 496 ~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~ 533 (700)
.+-+..+.+.+++.. ++++|||+||.++..++.+.|
T Consensus 75 ~~~~~~~~~~~~~~~--~~l~G~S~Gg~~~~~~~~~~p 110 (282)
T COG0596 75 ADDLAALLDALGLEK--VVLVGHSMGGAVALALALRHP 110 (282)
T ss_pred HHHHHHHHHHhCCCc--eEEEEecccHHHHHHHHHhcc
Confidence 455556666666444 999999999999999999876
No 100
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=97.66 E-value=0.00059 Score=82.20 Aligned_cols=69 Identities=28% Similarity=0.315 Sum_probs=54.7
Q ss_pred HHHHHHHHCCcEEEEEcCCCC-----cCCC--cccHHHHHHHHHHHHHHc--------------CCCCCCEEEEecChhH
Q 040989 464 LLVLHALSRGFAIITISSAGR-----CWTL--GEERLVVREIIRWWVERH--------------KLEKLPLVALGASSGG 522 (700)
Q Consensus 464 ~~~~~~~~~GyaV~avd~~g~-----~w~~--~~e~~~v~a~l~~~~~~~--------------~l~~~pl~l~G~S~GG 522 (700)
.+...+++|||+|+++|.||+ +|.. ..|..|..++|+|+..+. ....-+|.++|.|+||
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 366889999999999999984 3322 467789999999988532 1224599999999999
Q ss_pred HHHHHHhhcc
Q 040989 523 YFVSALAKGL 532 (700)
Q Consensus 523 ~~a~~la~~~ 532 (700)
++++.+|...
T Consensus 350 ~~~~~aAa~~ 359 (767)
T PRK05371 350 TLPNAVATTG 359 (767)
T ss_pred HHHHHHHhhC
Confidence 9999998864
No 101
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=97.65 E-value=5.8e-05 Score=82.63 Aligned_cols=114 Identities=20% Similarity=0.258 Sum_probs=63.1
Q ss_pred EEeecC---CCceEEEEeccCCCCCCccccC---CCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCC---C--------
Q 040989 422 IWQIPD---SPKAVLFLAHGCNGRAVHFWDR---SPNCPNCIGLPEERLLVLHALSRGFAIITISSAG---R-------- 484 (700)
Q Consensus 422 ~~~~P~---~pr~vvv~lHG~~~~~~~~~~~---s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g---~-------- 484 (700)
|.-+|. .|-|.||.+||.++........ ++.-..-..-| ...+...|+++||.|+++|..+ +
T Consensus 104 ylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~-~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~ 182 (390)
T PF12715_consen 104 YLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDP-KQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQ 182 (390)
T ss_dssp EEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTST-TT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTT
T ss_pred EEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccc-cccHHHHHHhCCCEEEEEcccccccccccccccc
Confidence 334576 4678999999986553221100 00000000111 2346789999999999999864 1
Q ss_pred c----------------CCC-cccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhcc-CcCe
Q 040989 485 C----------------WTL-GEERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGL-RFSS 536 (700)
Q Consensus 485 ~----------------w~~-~~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~-~~~g 536 (700)
. |++ +.-..+...+++++..+-.+++.+|-++|+||||+.++.||+-- ++.+
T Consensus 183 ~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDdRIka 252 (390)
T PF12715_consen 183 GSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDDRIKA 252 (390)
T ss_dssp TTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-TT--E
T ss_pred ccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcchhhHh
Confidence 0 010 01123445577777777788999999999999999999998763 4544
No 102
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=97.60 E-value=0.00048 Score=79.49 Aligned_cols=97 Identities=15% Similarity=0.111 Sum_probs=68.8
Q ss_pred cCCeEEEEeecCC---CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCC-----
Q 040989 416 RNGTDVIWQIPDS---PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWT----- 487 (700)
Q Consensus 416 ~~G~~l~~~~P~~---pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~----- 487 (700)
-+-.+|+.+.|.. .+.-|||+||+....- .++ |-.+.++++.|+++||.|+++|.+|...+
T Consensus 171 ~~~~eLi~Y~P~t~~~~~~PlLiVp~~i~k~y-ilD----------L~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~ 239 (532)
T TIGR01838 171 NELFQLIQYEPTTETVHKTPLLIVPPWINKYY-ILD----------LRPQNSLVRWLVEQGHTVFVISWRNPDASQADKT 239 (532)
T ss_pred CCcEEEEEeCCCCCcCCCCcEEEECcccccce-eee----------cccchHHHHHHHHCCcEEEEEECCCCCcccccCC
Confidence 3445676667763 3577899999976631 233 22235799999999999999999874432
Q ss_pred CcccH-HHHHHHHHHHHHHcCCCCCCEEEEecChhHHHH
Q 040989 488 LGEER-LVVREIIRWWVERHKLEKLPLVALGASSGGYFV 525 (700)
Q Consensus 488 ~~~e~-~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a 525 (700)
+.... ..+.++++.+.+..| ..++.++|+||||.++
T Consensus 240 ~ddY~~~~i~~al~~v~~~~g--~~kv~lvG~cmGGtl~ 276 (532)
T TIGR01838 240 FDDYIRDGVIAALEVVEAITG--EKQVNCVGYCIGGTLL 276 (532)
T ss_pred hhhhHHHHHHHHHHHHHHhcC--CCCeEEEEECcCcHHH
Confidence 22222 457788888887664 5689999999999986
No 103
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.54 E-value=0.00024 Score=73.06 Aligned_cols=111 Identities=22% Similarity=0.339 Sum_probs=69.8
Q ss_pred eEEEEeecCC-----CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCC----cEEEEEcCCCC-----
Q 040989 419 TDVIWQIPDS-----PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRG----FAIITISSAGR----- 484 (700)
Q Consensus 419 ~~l~~~~P~~-----pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~G----yaV~avd~~g~----- 484 (700)
+++..++|.. +-|||+++||. .++... -........+.+.| ..+++++..+.
T Consensus 8 ~~~~VylP~~y~~~~~~PvlylldG~----~~~~~~----------~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~ 73 (251)
T PF00756_consen 8 RRVWVYLPPGYDPSKPYPVLYLLDGQ----SGWFRN----------GNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYT 73 (251)
T ss_dssp EEEEEEECTTGGTTTTEEEEEEESHT----THHHHH----------HHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTS
T ss_pred EEEEEEECCCCCCCCCCEEEEEccCC----cccccc----------chHHHHHHHHHHhCCCCceEEEEEeccccccccc
Confidence 4566677864 35999999997 112111 00112334445554 55666666442
Q ss_pred cCCCc------------c---cHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEEEEEecCC
Q 040989 485 CWTLG------------E---ERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIALMIAEGL 545 (700)
Q Consensus 485 ~w~~~------------~---e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv~~I~~G~ 545 (700)
.|..+ . +.-...+++.++.++++....+.+++|+||||+.|+.+|.++| |++++ ..+|.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~--~~S~~ 149 (251)
T PF00756_consen 74 SWYLPAGSSRRADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVI--AFSGA 149 (251)
T ss_dssp BTTSSBCTTCBCTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEE--EESEE
T ss_pred ccccccccccccccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCcccccccc--ccCcc
Confidence 23311 0 1134467777888888877777999999999999999999986 77754 24444
No 104
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.45 E-value=0.00069 Score=77.20 Aligned_cols=103 Identities=15% Similarity=0.001 Sum_probs=68.6
Q ss_pred ccCCeEEEEeecC-----CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHC-CcEEEEEcCCCCcCCC
Q 040989 415 LRNGTDVIWQIPD-----SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSR-GFAIITISSAGRCWTL 488 (700)
Q Consensus 415 ~~~G~~l~~~~P~-----~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~-GyaV~avd~~g~~w~~ 488 (700)
+-|-..+-.+.|. .+.||||++||++...+.-... .+ ...+... |+.|+.++||-...++
T Consensus 75 sEdcl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~---------~~-----~~~~~~~~~~~vv~~~yRlg~~g~ 140 (493)
T cd00312 75 SEDCLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLY---------PG-----DGLAREGDNVIVVSINYRLGVLGF 140 (493)
T ss_pred CCcCCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCC---------Ch-----HHHHhcCCCEEEEEeccccccccc
Confidence 4455566555664 3469999999997653321110 01 1122233 3999999998322221
Q ss_pred ----------cccHHHHHHHHHHHH---HHcCCCCCCEEEEecChhHHHHHHHhhc
Q 040989 489 ----------GEERLVVREIIRWWV---ERHKLEKLPLVALGASSGGYFVSALAKG 531 (700)
Q Consensus 489 ----------~~e~~~v~a~l~~~~---~~~~l~~~pl~l~G~S~GG~~a~~la~~ 531 (700)
..-..|..++++|+. +.+|.++.+|.++|+|+||++++.+...
T Consensus 141 ~~~~~~~~~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~ 196 (493)
T cd00312 141 LSTGDIELPGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLS 196 (493)
T ss_pred ccCCCCCCCcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhC
Confidence 112478889998886 4568899999999999999999988876
No 105
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=97.40 E-value=0.0014 Score=71.21 Aligned_cols=89 Identities=24% Similarity=0.393 Sum_probs=65.6
Q ss_pred CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCC--C-----CcC-C----C-------c
Q 040989 429 PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSA--G-----RCW-T----L-------G 489 (700)
Q Consensus 429 pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~--g-----~~w-~----~-------~ 489 (700)
.||++|.+.|-|.+. ||.+. ..+++.|++.|++-+.+..+ | ..+ + . .
T Consensus 91 ~rp~~IhLagTGDh~--f~rR~------------~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~ 156 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHG--FWRRR------------RLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGR 156 (348)
T ss_pred CCceEEEecCCCccc--hhhhh------------hhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHh
Confidence 489999999999986 77651 12488899999999999853 2 011 1 0 1
Q ss_pred ccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccCc
Q 040989 490 EERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLRF 534 (700)
Q Consensus 490 ~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~~ 534 (700)
.-+.++++++.|+.++ |.. |+-+.|.||||.||.+.|+..|.
T Consensus 157 ~~i~E~~~Ll~Wl~~~-G~~--~~g~~G~SmGG~~A~laa~~~p~ 198 (348)
T PF09752_consen 157 ATILESRALLHWLERE-GYG--PLGLTGISMGGHMAALAASNWPR 198 (348)
T ss_pred HHHHHHHHHHHHHHhc-CCC--ceEEEEechhHhhHHhhhhcCCC
Confidence 1235677788777777 644 99999999999999999988653
No 106
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=97.37 E-value=0.00055 Score=67.83 Aligned_cols=63 Identities=16% Similarity=0.174 Sum_probs=51.1
Q ss_pred cEEEEEcCCCCcCCCc---c-----cHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 474 FAIITISSAGRCWTLG---E-----ERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 474 yaV~avd~~g~~w~~~---~-----e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
|-|+++|.||.+++.+ . ...+..+.++.+++..+.+. ++++|+||||.+++.+|..+| +.+++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~vG~S~Gg~~~~~~a~~~p~~v~~lv 73 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKK--INLVGHSMGGMLALEYAAQYPERVKKLV 73 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSS--EEEEEETHHHHHHHHHHHHSGGGEEEEE
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCC--eEEEEECCChHHHHHHHHHCchhhcCcE
Confidence 6799999999777653 1 24788888999999987655 999999999999999999986 44443
No 107
>PF09322 DUF1979: Domain of unknown function (DUF1979); InterPro: IPR015401 This N-terminal domain is functionally uncharacterised and found in various Oryza sativa (Rice) mutator-like transposases.
Probab=97.35 E-value=0.00018 Score=56.33 Aligned_cols=48 Identities=23% Similarity=0.351 Sum_probs=40.2
Q ss_pred ccceEEEEEECCEEEEcCCeeEEEeCCe----------eceeecCCCCCHHHHHHHHHhhcccCC
Q 040989 63 MSQVRVLVMYDGKWFCSPSGYYLYSGGQ----------TKGIIVSDDITYKELVDRLYGIVKVDT 117 (700)
Q Consensus 63 ~~~V~i~~~~gGe~v~~~~G~y~Y~G~~----------~kgI~V~~~~ty~~l~~~l~~~l~ID~ 117 (700)
|++..++..|.|+ +|-+| |+. ++||+.|.+.|+..++.||++.|+|||
T Consensus 1 Ms~K~~F~~~hg~----GNvR~---Gp~GvdLs~Fi~~~rGIdrpAERs~~si~~WLmRG~rvDp 58 (58)
T PF09322_consen 1 MSSKVIFQIYHGE----GNVRY---GPTGVDLSEFIVTSRGIDRPAERSVPSIKGWLMRGFRVDP 58 (58)
T ss_pred CCCceeEEEEEcC----CceeE---CCCccchhHeeeeccccCchhhhccHHHHHHHHhccccCC
Confidence 6788888888776 55554 443 899999999999999999999999996
No 108
>PF08731 AFT: Transcription factor AFT; InterPro: IPR014842 AFT (activator of iron transcription) is an iron regulated transcriptional activator that regulates the expression of genes involved in iron homeostasis. This entry includes the paralogous pair of transcription factors AFT1 and AFT2.
Probab=97.33 E-value=0.0013 Score=60.07 Aligned_cols=69 Identities=17% Similarity=0.336 Sum_probs=63.9
Q ss_pred cCCHHHHHHHHHHHhhhccceEEEeeecCcEEEEEecC------------------------------------------
Q 040989 295 FTSKKDLIKKLKLGAAKKNFAFKVSKSTKDRFEVVCAD------------------------------------------ 332 (700)
Q Consensus 295 F~~k~~~r~al~~~aI~~~f~~~~~kS~~~r~~~~C~~------------------------------------------ 332 (700)
|.+|.|++.-|..++..++|++.+.+||.+-++.+|..
T Consensus 1 F~~k~~ikpwlq~~~~~~Gi~iVIerSd~~ki~FkCk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~t~srk 80 (111)
T PF08731_consen 1 FDDKDEIKPWLQKIFYPQGIGIVIERSDKKKIVFKCKNGKRYRHKKKKKGQAQAQQKESTSGNKNKSSKKKKKKRTKSRK 80 (111)
T ss_pred CCchHHHHHHHHHHhhhcCceEEEEecCCceEEEEEecCCCcccccccccccccccccccccccccccccccCCcccccc
Confidence 88999999999999999999999999999999999931
Q ss_pred CCCccEEEEEeeCCCCeEEEEEecCCccccC
Q 040989 333 TNCKWRLRATKTAEDEYFEIRRFSNIHICTQ 363 (700)
Q Consensus 333 ~gC~Wri~A~~~~~~~~f~I~~~~~~HtC~~ 363 (700)
-.||.||+|.-....+.|.|+..++.|+..+
T Consensus 81 ~~CPFriRA~yS~k~k~W~lvvvnn~HnH~l 111 (111)
T PF08731_consen 81 NTCPFRIRANYSKKNKKWTLVVVNNEHNHPL 111 (111)
T ss_pred cCCCeEEEEEEEecCCeEEEEEecCCcCCCC
Confidence 2599999999999999999999999998753
No 109
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=97.30 E-value=0.00068 Score=68.56 Aligned_cols=84 Identities=20% Similarity=0.161 Sum_probs=58.5
Q ss_pred EEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCC--CcccH-HHHHHHHHHHHHHcCC
Q 040989 432 VLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWT--LGEER-LVVREIIRWWVERHKL 508 (700)
Q Consensus 432 vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~--~~~e~-~~v~a~l~~~~~~~~l 508 (700)
.||++||.++++..|. .+++.+...++.|+++++.|+.-. ..... .-+...++.+.+..
T Consensus 2 ~lf~~p~~gG~~~~y~----------------~la~~l~~~~~~v~~i~~~~~~~~~~~~~si~~la~~y~~~I~~~~-- 63 (229)
T PF00975_consen 2 PLFCFPPAGGSASSYR----------------PLARALPDDVIGVYGIEYPGRGDDEPPPDSIEELASRYAEAIRARQ-- 63 (229)
T ss_dssp EEEEESSTTCSGGGGH----------------HHHHHHTTTEEEEEEECSTTSCTTSHEESSHHHHHHHHHHHHHHHT--
T ss_pred eEEEEcCCccCHHHHH----------------HHHHhCCCCeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHhhhhC--
Confidence 6899999999875552 255555444799999999986411 11222 33444555555554
Q ss_pred CCCCEEEEecChhHHHHHHHhhccC
Q 040989 509 EKLPLVALGASSGGYFVSALAKGLR 533 (700)
Q Consensus 509 ~~~pl~l~G~S~GG~~a~~la~~~~ 533 (700)
+.-|.+|+|+|+||.+|..+|.++.
T Consensus 64 ~~gp~~L~G~S~Gg~lA~E~A~~Le 88 (229)
T PF00975_consen 64 PEGPYVLAGWSFGGILAFEMARQLE 88 (229)
T ss_dssp SSSSEEEEEETHHHHHHHHHHHHHH
T ss_pred CCCCeeehccCccHHHHHHHHHHHH
Confidence 2339999999999999999999863
No 110
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=97.26 E-value=0.0012 Score=70.91 Aligned_cols=92 Identities=15% Similarity=0.121 Sum_probs=64.0
Q ss_pred CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCC-ccc-----HHHHHHHHHHH
Q 040989 429 PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTL-GEE-----RLVVREIIRWW 502 (700)
Q Consensus 429 pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~-~~e-----~~~v~a~l~~~ 502 (700)
-.|+|+++||.=..--+ |+ .....|..+||.|+|+|.||=..+- +.. ...+..-+..+
T Consensus 43 ~gP~illlHGfPe~wys-wr---------------~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~l 106 (322)
T KOG4178|consen 43 DGPIVLLLHGFPESWYS-WR---------------HQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVAL 106 (322)
T ss_pred CCCEEEEEccCCccchh-hh---------------hhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHH
Confidence 36899999999666322 22 2456788999999999999844432 111 12233333344
Q ss_pred HHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 503 VERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 503 ~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
....| -..+++.||+.|+-+|+.||..+| ..|++
T Consensus 107 ld~Lg--~~k~~lvgHDwGaivaw~la~~~Perv~~lv 142 (322)
T KOG4178|consen 107 LDHLG--LKKAFLVGHDWGAIVAWRLALFYPERVDGLV 142 (322)
T ss_pred HHHhc--cceeEEEeccchhHHHHHHHHhChhhcceEE
Confidence 45554 558999999999999999999875 66765
No 111
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.26 E-value=0.00076 Score=70.55 Aligned_cols=102 Identities=20% Similarity=0.284 Sum_probs=71.5
Q ss_pred eeccCCeEE-EEee-cC---CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCC--Cc
Q 040989 413 VELRNGTDV-IWQI-PD---SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAG--RC 485 (700)
Q Consensus 413 ~~~~~G~~l-~~~~-P~---~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g--~~ 485 (700)
....+|.++ .|.+ |. .+.|.||-+||++++++.+.+. ..+...||||+.+|-|| ..
T Consensus 61 f~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~-----------------l~wa~~Gyavf~MdvRGQg~~ 123 (321)
T COG3458 61 FTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDM-----------------LHWAVAGYAVFVMDVRGQGSS 123 (321)
T ss_pred EeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCcccc-----------------ccccccceeEEEEecccCCCc
Confidence 345566677 5654 75 3579999999999997633221 34567999999999886 33
Q ss_pred CCC-------------------c-cc-------HHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhc
Q 040989 486 WTL-------------------G-EE-------RLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKG 531 (700)
Q Consensus 486 w~~-------------------~-~e-------~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~ 531 (700)
|.- + .+ ..|+..+++.+..=..++..+|-+.|.|.||++++..|.-
T Consensus 124 ~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal 196 (321)
T COG3458 124 SQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAAL 196 (321)
T ss_pred cccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhc
Confidence 320 0 11 2456666666665556788999999999999999887764
No 112
>KOG3101 consensus Esterase D [General function prediction only]
Probab=97.24 E-value=0.0003 Score=70.94 Aligned_cols=100 Identities=22% Similarity=0.319 Sum_probs=67.8
Q ss_pred eEEEEeecC-C----CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEc--CCC-------C
Q 040989 419 TDVIWQIPD-S----PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITIS--SAG-------R 484 (700)
Q Consensus 419 ~~l~~~~P~-~----pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd--~~g-------~ 484 (700)
.++..++|+ . +-|+|+++-|......+|... ...-++|.++|++|+++| +|| .
T Consensus 28 Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~K-------------sg~qq~As~hgl~vV~PDTSPRG~~v~g~~e 94 (283)
T KOG3101|consen 28 MTFGVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEK-------------SGFQQQASKHGLAVVAPDTSPRGVEVAGDDE 94 (283)
T ss_pred eEEEEecCCCcccCCcCceEEEecCCcccchhhHhh-------------hhHHHhHhhcCeEEECCCCCCCccccCCCcc
Confidence 345556765 2 359999999998888888654 235578999999999998 454 4
Q ss_pred cCCCcc----------cH-H--------HHHHHHHHHH-HHcCCCCCCEEEEecChhHHHHHHHhhc
Q 040989 485 CWTLGE----------ER-L--------VVREIIRWWV-ERHKLEKLPLVALGASSGGYFVSALAKG 531 (700)
Q Consensus 485 ~w~~~~----------e~-~--------~v~a~l~~~~-~~~~l~~~pl~l~G~S~GG~~a~~la~~ 531 (700)
.|.++. |. . .++.+.+.+- ....++...+-++||||||+-|+-.+++
T Consensus 95 swDFG~GAGFYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lk 161 (283)
T KOG3101|consen 95 SWDFGQGAGFYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLK 161 (283)
T ss_pred cccccCCceeEEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEc
Confidence 676531 11 1 1222222222 2236777888999999999998877766
No 113
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.20 E-value=0.00056 Score=74.60 Aligned_cols=92 Identities=13% Similarity=0.209 Sum_probs=60.2
Q ss_pred CceEEEEeccCCCCC-CccccCCCCCCCCCCCchHHHHHHHHHHC---CcEEEEEcCCCCcCCC--------cccHHHHH
Q 040989 429 PKAVLFLAHGCNGRA-VHFWDRSPNCPNCIGLPEERLLVLHALSR---GFAIITISSAGRCWTL--------GEERLVVR 496 (700)
Q Consensus 429 pr~vvv~lHG~~~~~-~~~~~~s~~c~~c~glpe~~~~~~~~~~~---GyaV~avd~~g~~w~~--------~~e~~~v~ 496 (700)
.++++|++||+..+. ...|. ..+.+.++++ .+.|+++|....+... ..-...+.
T Consensus 70 ~~pt~iiiHGw~~~~~~~~~~--------------~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la 135 (331)
T PF00151_consen 70 SKPTVIIIHGWTGSGSSESWI--------------QDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLA 135 (331)
T ss_dssp TSEEEEEE--TT-TT-TTTHH--------------HHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEcCcCCcccchhHH--------------HHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHH
Confidence 489999999999887 44443 3356666664 9999999975322211 11124566
Q ss_pred HHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccCc
Q 040989 497 EIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLRF 534 (700)
Q Consensus 497 a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~~ 534 (700)
.+|+.+..+.+++...+.++|||+||.+|...+..+.-
T Consensus 136 ~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 136 KFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp HHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred HHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccC
Confidence 67777777778899999999999999999999988643
No 114
>PRK07868 acyl-CoA synthetase; Validated
Probab=97.19 E-value=0.0024 Score=79.36 Aligned_cols=112 Identities=16% Similarity=0.046 Sum_probs=70.2
Q ss_pred eccCCeEEEEeecCC-------CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCC--
Q 040989 414 ELRNGTDVIWQIPDS-------PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGR-- 484 (700)
Q Consensus 414 ~~~~G~~l~~~~P~~-------pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~-- 484 (700)
-..+-.+|+.|.|.. ..+.||++||...+.. .|+.. | +.+++..|.++||.|+++|....
T Consensus 44 ~~~~~~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~-~~d~~---------~-~~s~v~~L~~~g~~v~~~d~G~~~~ 112 (994)
T PRK07868 44 ESVPMYRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSAD-MWDVT---------R-DDGAVGILHRAGLDPWVIDFGSPDK 112 (994)
T ss_pred EEcCcEEEEEeCCCCccccccCCCCcEEEECCCCCCcc-ceecC---------C-cccHHHHHHHCCCEEEEEcCCCCCh
Confidence 344556777776653 2468999999987763 35431 2 23578889999999999996321
Q ss_pred ---cCCCcccHHHHHHHHHHHH--HHcCCCCCCEEEEecChhHHHHHHHhhcc---CcCeEEE
Q 040989 485 ---CWTLGEERLVVREIIRWWV--ERHKLEKLPLVALGASSGGYFVSALAKGL---RFSSIAL 539 (700)
Q Consensus 485 ---~w~~~~e~~~v~a~l~~~~--~~~~l~~~pl~l~G~S~GG~~a~~la~~~---~~~glv~ 539 (700)
.+. ..-...+..+++.+. .+.+ +.++.++|+||||.+++.++... ++.++++
T Consensus 113 ~~~~~~-~~l~~~i~~l~~~l~~v~~~~--~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl 172 (994)
T PRK07868 113 VEGGME-RNLADHVVALSEAIDTVKDVT--GRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVT 172 (994)
T ss_pred hHcCcc-CCHHHHHHHHHHHHHHHHHhh--CCceEEEEEChhHHHHHHHHHhcCCCccceEEE
Confidence 110 111233333333331 2222 45899999999999999888643 3566653
No 115
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=97.16 E-value=0.003 Score=65.26 Aligned_cols=93 Identities=19% Similarity=0.253 Sum_probs=55.9
Q ss_pred ceEEEEeccCCCCCCccccCCCCCCCCCCCchHH--HHHHHHHHCCcEEEEEcCCCC--cC---CCcccHHHHHHHHHHH
Q 040989 430 KAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEER--LLVLHALSRGFAIITISSAGR--CW---TLGEERLVVREIIRWW 502 (700)
Q Consensus 430 r~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~--~~~~~~~~~GyaV~avd~~g~--~w---~~~~e~~~v~a~l~~~ 502 (700)
+..|+|+||.+++...+.. ++.+. ..........|.++++|+... .+ ........+..+++.+
T Consensus 4 g~pVlFIhG~~Gs~~q~rs----------l~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i 73 (225)
T PF07819_consen 4 GIPVLFIHGNAGSYKQVRS----------LASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYI 73 (225)
T ss_pred CCEEEEECcCCCCHhHHHH----------HHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHH
Confidence 3578999998887433211 11111 001112233588888887542 11 1223445666777776
Q ss_pred HHHc---CCCCCCEEEEecChhHHHHHHHhhcc
Q 040989 503 VERH---KLEKLPLVALGASSGGYFVSALAKGL 532 (700)
Q Consensus 503 ~~~~---~l~~~pl~l~G~S~GG~~a~~la~~~ 532 (700)
.+.+ .-.+.++++.||||||-+|-.+....
T Consensus 74 ~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~ 106 (225)
T PF07819_consen 74 LELYKSNRPPPRSVILVGHSMGGLVARSALSLP 106 (225)
T ss_pred HHhhhhccCCCCceEEEEEchhhHHHHHHHhcc
Confidence 6555 44678999999999998877766553
No 116
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=97.12 E-value=0.00093 Score=67.12 Aligned_cols=84 Identities=20% Similarity=0.239 Sum_probs=57.7
Q ss_pred EEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCcccHHHHHHHHHHHHHHcCCCCCC
Q 040989 433 LFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLGEERLVVREIIRWWVERHKLEKLP 512 (700)
Q Consensus 433 vv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~~e~~~v~a~l~~~~~~~~l~~~p 512 (700)
|+++||-..++...- -..+.+.+.+.|..+-.+.+ ..+.....+.+.+..++++.. +..
T Consensus 2 ilYlHGF~Ssp~S~K--------------a~~l~~~~~~~~~~~~~~~p-----~l~~~p~~a~~~l~~~i~~~~--~~~ 60 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFK--------------AQALKQYFAEHGPDIQYPCP-----DLPPFPEEAIAQLEQLIEELK--PEN 60 (187)
T ss_pred eEEecCCCCCCCCHH--------------HHHHHHHHHHhCCCceEECC-----CCCcCHHHHHHHHHHHHHhCC--CCC
Confidence 789999988865532 13455666666654433322 223445556666777777763 344
Q ss_pred EEEEecChhHHHHHHHhhccCcCeE
Q 040989 513 LVALGASSGGYFVSALAKGLRFSSI 537 (700)
Q Consensus 513 l~l~G~S~GG~~a~~la~~~~~~gl 537 (700)
+.++|.||||+.|..||.+++..++
T Consensus 61 ~~liGSSlGG~~A~~La~~~~~~av 85 (187)
T PF05728_consen 61 VVLIGSSLGGFYATYLAERYGLPAV 85 (187)
T ss_pred eEEEEEChHHHHHHHHHHHhCCCEE
Confidence 9999999999999999999887774
No 117
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=97.11 E-value=0.0013 Score=71.75 Aligned_cols=87 Identities=24% Similarity=0.336 Sum_probs=67.8
Q ss_pred CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCc-------CC---------CcccH
Q 040989 429 PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRC-------WT---------LGEER 492 (700)
Q Consensus 429 pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~-------w~---------~~~e~ 492 (700)
+.|+|++-||.|.+-.+|. .++..+...||.|.++++.|.. .. |-+..
T Consensus 70 ~~PlvvlshG~Gs~~~~f~----------------~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp 133 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFA----------------WLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERP 133 (365)
T ss_pred cCCeEEecCCCCCCccchh----------------hhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhccc
Confidence 5799999999999976652 2678899999999999997611 11 11334
Q ss_pred HHHHHHHHHHHHH-----c--CCCCCCEEEEecChhHHHHHHHhhc
Q 040989 493 LVVREIIRWWVER-----H--KLEKLPLVALGASSGGYFVSALAKG 531 (700)
Q Consensus 493 ~~v~a~l~~~~~~-----~--~l~~~pl~l~G~S~GG~~a~~la~~ 531 (700)
.++..+|+++.+. + .++..||.++|||.||+-++.++..
T Consensus 134 ~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA 179 (365)
T COG4188 134 LDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGA 179 (365)
T ss_pred ccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccc
Confidence 6788888888766 2 5677899999999999999998754
No 118
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=97.10 E-value=0.0029 Score=70.58 Aligned_cols=111 Identities=14% Similarity=0.195 Sum_probs=73.4
Q ss_pred ccCCeEEEEee---cCC-CceEEEEeccCCCCC------------CccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEE
Q 040989 415 LRNGTDVIWQI---PDS-PKAVLFLAHGCNGRA------------VHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIIT 478 (700)
Q Consensus 415 ~~~G~~l~~~~---P~~-pr~vvv~lHG~~~~~------------~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~a 478 (700)
.+...++.|+. +.. .-.+||++|+..++. ..||+.. .| | =+.+.-..|-||+
T Consensus 37 ~l~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~------iG-~-----g~~lDt~~yfvi~ 104 (389)
T PRK06765 37 TIPDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGL------IG-P-----GKAIDTNKYFVIS 104 (389)
T ss_pred CcCCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhc------cC-C-----CCCcCCCceEEEE
Confidence 34455777776 322 247999999997753 2234421 11 1 1335567899999
Q ss_pred EcCCCCcCC------------------------Cc-ccHHHHHHHHHHHHHHcCCCCCCE-EEEecChhHHHHHHHhhcc
Q 040989 479 ISSAGRCWT------------------------LG-EERLVVREIIRWWVERHKLEKLPL-VALGASSGGYFVSALAKGL 532 (700)
Q Consensus 479 vd~~g~~w~------------------------~~-~e~~~v~a~l~~~~~~~~l~~~pl-~l~G~S~GG~~a~~la~~~ 532 (700)
++..|.|.+ ++ -...+..+.+..+.+++++. ++ +++|+||||.+++.+|.++
T Consensus 105 ~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~--~~~~vvG~SmGG~ial~~a~~~ 182 (389)
T PRK06765 105 TDTLCNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIA--RLHAVMGPSMGGMQAQEWAVHY 182 (389)
T ss_pred ecccCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCC--CceEEEEECHHHHHHHHHHHHC
Confidence 999888762 11 12456666666777777764 45 5999999999999999998
Q ss_pred C--cCeEEE
Q 040989 533 R--FSSIAL 539 (700)
Q Consensus 533 ~--~~glv~ 539 (700)
| +.++++
T Consensus 183 P~~v~~lv~ 191 (389)
T PRK06765 183 PHMVERMIG 191 (389)
T ss_pred hHhhheEEE
Confidence 6 666653
No 119
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=97.06 E-value=0.0015 Score=67.25 Aligned_cols=80 Identities=20% Similarity=0.268 Sum_probs=52.4
Q ss_pred EEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcE---EEEEcCCCC-cCCC-------cccHHHHHHHHHH
Q 040989 433 LFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFA---IITISSAGR-CWTL-------GEERLVVREIIRW 501 (700)
Q Consensus 433 vv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~Gya---V~avd~~g~-~w~~-------~~e~~~v~a~l~~ 501 (700)
|||+||.+++...-|.. +...|.++||. |+++++.+. .... -+.+..+++.|+.
T Consensus 4 VVlVHG~~~~~~~~w~~---------------~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~ 68 (219)
T PF01674_consen 4 VVLVHGTGGNAYSNWST---------------LAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDA 68 (219)
T ss_dssp EEEE--TTTTTCGGCCH---------------HHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHH
T ss_pred EEEECCCCcchhhCHHH---------------HHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHH
Confidence 78999999866555543 78899999999 899998542 2111 1234678888888
Q ss_pred HHHHcCCCCCCEEEEecChhHHHHHHHhh
Q 040989 502 WVERHKLEKLPLVALGASSGGYFVSALAK 530 (700)
Q Consensus 502 ~~~~~~l~~~pl~l~G~S~GG~~a~~la~ 530 (700)
+.+..| . ++=+.||||||.++-.+..
T Consensus 69 Vl~~TG--a-kVDIVgHS~G~~iaR~yi~ 94 (219)
T PF01674_consen 69 VLAYTG--A-KVDIVGHSMGGTIARYYIK 94 (219)
T ss_dssp HHHHHT-----EEEEEETCHHHHHHHHHH
T ss_pred HHHhhC--C-EEEEEEcCCcCHHHHHHHH
Confidence 888765 3 9999999999988876654
No 120
>smart00666 PB1 PB1 domain. Phox and Bem1p domain, present in many eukaryotic cytoplasmic signalling proteins. The domain adopts a beta-grasp fold, similar to that found in ubiquitin and Ras-binding domains. A motif, variously termed OPR, PC and AID, represents the most conserved region of the majority of PB1 domains, and is necessary for PB1 domain function. This function is the formation of PB1 domain heterodimers, although not all PB1 domain pairs associate.
Probab=97.02 E-value=0.0021 Score=55.20 Aligned_cols=64 Identities=25% Similarity=0.406 Sum_probs=53.6
Q ss_pred EEeCCeeceeecCCCCCHHHHHHHHHhhcccCCceeEEEEEEEEeCCCCCceeeeecchhHHHHHhhccC
Q 040989 85 LYSGGQTKGIIVSDDITYKELVDRLYGIVKVDTNEYVITMKSLYKANIPTMPVEIVDDDDVRFFIQENAA 154 (700)
Q Consensus 85 ~Y~G~~~kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l~~k~~~~~~~~~~pi~I~dD~Dv~~ml~~~~~ 154 (700)
.| |++.+.+.++..+||++|.++|.++|++..+.+ .++|+- ..-..++|.+|.||+.++++...
T Consensus 7 ~~-~~~~~~~~~~~~~s~~dL~~~i~~~~~~~~~~~--~l~Y~D---edgd~v~l~sd~Dl~~a~~~~~~ 70 (81)
T smart00666 7 RY-GGETRRLSVPRDISFEDLRSKVAKRFGLDNQSF--TLKYQD---EDGDLVSLTSDEDLEEAIEEYDS 70 (81)
T ss_pred EE-CCEEEEEEECCCCCHHHHHHHHHHHhCCCCCCe--EEEEEC---CCCCEEEecCHHHHHHHHHHHHH
Confidence 46 788999999999999999999999999987655 556653 24568999999999999997653
No 121
>PF10532 Plant_all_beta: Plant specific N-all beta domain; InterPro: IPR018290 This entry represents a domain with an all-beta structure that is found in Mutator-like elements (MULE)-encoded tranposases, some of which also contain a zinc-finger motif [, ]. This domain is found associated with the WRKY domain [].
Probab=97.00 E-value=0.00063 Score=62.00 Aligned_cols=56 Identities=16% Similarity=0.158 Sum_probs=42.3
Q ss_pred hhcccCCceeEEEEEEEEeCCCCCceeeeecchhHHHHHhhccCCCCCCCccEEEEEEe
Q 040989 111 GIVKVDTNEYVITMKSLYKANIPTMPVEIVDDDDVRFFIQENAAHPTELRSPICITIER 169 (700)
Q Consensus 111 ~~l~ID~~~~~l~~k~~~~~~~~~~pi~I~dD~Dv~~ml~~~~~~~~~~~~~L~i~ve~ 169 (700)
+|++||.++.||+|+|+--.-.++++++|.||+||..||+..+.++ +.|+.++..-
T Consensus 1 ~Ki~lDe~~~klklsY~p~~~~~~re~yI~DDEDv~~Ylt~~d~e~---~r~VLhVE~~ 56 (114)
T PF10532_consen 1 KKIGLDESKVKLKLSYNPFSVKPKRETYIVDDEDVLVYLTSVDEEG---RRSVLHVEVV 56 (114)
T ss_pred CccccCccceEEEEEEeeeccCCccceeEecCCcEEEEEEEccccc---ceeeEEEEEe
Confidence 4789999999998886432257899999999999999999777542 3465554333
No 122
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=96.94 E-value=0.0045 Score=71.11 Aligned_cols=111 Identities=16% Similarity=0.157 Sum_probs=76.9
Q ss_pred eccCCeEEEEee--cC-----CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcC
Q 040989 414 ELRNGTDVIWQI--PD-----SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCW 486 (700)
Q Consensus 414 ~~~~G~~l~~~~--P~-----~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w 486 (700)
++..|..+|--+ |. .+-|+++++=|+-+-- .-. ..+.|.-. + ....|+.+||.|+.+|.||.|.
T Consensus 619 qs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQ--lVn-----nsfkgi~y-l-R~~~LaslGy~Vv~IDnRGS~h 689 (867)
T KOG2281|consen 619 QSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQ--LVN-----NSFKGIQY-L-RFCRLASLGYVVVFIDNRGSAH 689 (867)
T ss_pred ecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceE--Eee-----ccccceeh-h-hhhhhhhcceEEEEEcCCCccc
Confidence 456677776544 54 2348999998873321 100 01122211 1 3456888999999999998554
Q ss_pred C---C---------cccHHHHHHHHHHHHHHcCC-CCCCEEEEecChhHHHHHHHhhccC
Q 040989 487 T---L---------GEERLVVREIIRWWVERHKL-EKLPLVALGASSGGYFVSALAKGLR 533 (700)
Q Consensus 487 ~---~---------~~e~~~v~a~l~~~~~~~~l-~~~pl~l~G~S~GG~~a~~la~~~~ 533 (700)
. | .-|++|-..-+++++++.|+ +-.++.+.|-|-||++++++-.++|
T Consensus 690 RGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P 749 (867)
T KOG2281|consen 690 RGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYP 749 (867)
T ss_pred cchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCc
Confidence 2 1 24567778889999999977 6689999999999999999988875
No 123
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=96.93 E-value=0.0021 Score=65.41 Aligned_cols=87 Identities=20% Similarity=0.239 Sum_probs=43.4
Q ss_pred CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCC-------------------------
Q 040989 429 PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAG------------------------- 483 (700)
Q Consensus 429 pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g------------------------- 483 (700)
+|.-||.|||.+.++.-|-.+. ..+.+.+.+.++-.+.+|..-
T Consensus 3 ~k~riLcLHG~~~na~if~~q~------------~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQT------------SALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPF 70 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHT------------HHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--
T ss_pred CCceEEEeCCCCcCHHHHHHHH------------HHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcc
Confidence 4788999999999987664331 234455544499999988531
Q ss_pred CcCCCcc----cHHHHHHHHH---HHHHHcCCCCCCE-EEEecChhHHHHHHHhhc
Q 040989 484 RCWTLGE----ERLVVREIIR---WWVERHKLEKLPL-VALGASSGGYFVSALAKG 531 (700)
Q Consensus 484 ~~w~~~~----e~~~v~a~l~---~~~~~~~l~~~pl-~l~G~S~GG~~a~~la~~ 531 (700)
++|-... ....+...++ ...++.| |. -++|+|+||++|+.|+..
T Consensus 71 ~~W~~~~~~~~~~~~~~~sl~~l~~~i~~~G----PfdGvlGFSQGA~lAa~ll~~ 122 (212)
T PF03959_consen 71 YSWWDPDDDDHEYEGLDESLDYLRDYIEENG----PFDGVLGFSQGAALAALLLAL 122 (212)
T ss_dssp EESS---S-SGGG---HHHHHHHHHHHHHH-------SEEEEETHHHHHHHHHHHH
T ss_pred eeeeecCCCcccccCHHHHHHHHHHHHHhcC----CeEEEEeecHHHHHHHHHHHH
Confidence 2343221 1233333333 3334443 43 599999999999999864
No 124
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=96.90 E-value=0.015 Score=65.59 Aligned_cols=103 Identities=15% Similarity=0.101 Sum_probs=69.5
Q ss_pred ccCCeEEEEeecC---CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCC-cEEEEEcCCCCcCC---
Q 040989 415 LRNGTDVIWQIPD---SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRG-FAIITISSAGRCWT--- 487 (700)
Q Consensus 415 ~~~G~~l~~~~P~---~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~G-yaV~avd~~g~~w~--- 487 (700)
+-|..-|-.+.|+ .++||+|++||++-..+.-... +.+. ..|+++| +-|+.++||=.-.+
T Consensus 76 sEDCL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~---------~ydg----s~La~~g~vVvVSvNYRLG~lGfL~ 142 (491)
T COG2272 76 SEDCLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEP---------LYDG----SALAARGDVVVVSVNYRLGALGFLD 142 (491)
T ss_pred cccceeEEeeccCCCCCCCcEEEEEeccccccCCCccc---------ccCh----HHHHhcCCEEEEEeCcccccceeee
Confidence 4445555334465 4579999999996655443221 1111 3467777 99999999832211
Q ss_pred C---c--------ccHHHHHHHHHHHH---HHcCCCCCCEEEEecChhHHHHHHHhh
Q 040989 488 L---G--------EERLVVREIIRWWV---ERHKLEKLPLVALGASSGGYFVSALAK 530 (700)
Q Consensus 488 ~---~--------~e~~~v~a~l~~~~---~~~~l~~~pl~l~G~S~GG~~a~~la~ 530 (700)
+ . --..|...+|+|+. +.+|-++.-|-|+|+|+||+.++.|-+
T Consensus 143 ~~~~~~~~~~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla 199 (491)
T COG2272 143 LSSLDTEDAFASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLA 199 (491)
T ss_pred hhhccccccccccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhc
Confidence 1 1 12468888999885 568989999999999999998877744
No 125
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=96.89 E-value=0.0035 Score=65.19 Aligned_cols=96 Identities=23% Similarity=0.258 Sum_probs=62.0
Q ss_pred ecCCCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCC--CcCCCccc-HHHHHHHHHH
Q 040989 425 IPDSPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAG--RCWTLGEE-RLVVREIIRW 501 (700)
Q Consensus 425 ~P~~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g--~~w~~~~e-~~~v~a~l~~ 501 (700)
+|..|+|+|-|+=|-.--+ +|. ---..+.+.+.++||+|+|.-+.- ..|....+ ....+.+++.
T Consensus 12 ~P~~P~gvihFiGGaf~ga---~P~----------itYr~lLe~La~~Gy~ViAtPy~~tfDH~~~A~~~~~~f~~~~~~ 78 (250)
T PF07082_consen 12 IPPRPKGVIHFIGGAFVGA---APQ----------ITYRYLLERLADRGYAVIATPYVVTFDHQAIAREVWERFERCLRA 78 (250)
T ss_pred eCCCCCEEEEEcCcceecc---CcH----------HHHHHHHHHHHhCCcEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Confidence 3889999998886652111 110 001357788999999999988853 11211111 1334445555
Q ss_pred HHHHcCC--CCCCEEEEecChhHHHHHHHhhccC
Q 040989 502 WVERHKL--EKLPLVALGASSGGYFVSALAKGLR 533 (700)
Q Consensus 502 ~~~~~~l--~~~pl~l~G~S~GG~~a~~la~~~~ 533 (700)
+.++.++ ..+|+|-+|||+|+-+-+.++..++
T Consensus 79 L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~ 112 (250)
T PF07082_consen 79 LQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFD 112 (250)
T ss_pred HHHhcCCCcccCCeeeeecccchHHHHHHhhhcc
Confidence 6655544 3479999999999999999987653
No 126
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=96.88 E-value=0.0023 Score=67.67 Aligned_cols=89 Identities=19% Similarity=0.326 Sum_probs=62.9
Q ss_pred CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHH---HCCcEEEEEcCCCCcCCC--------------ccc
Q 040989 429 PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHAL---SRGFAIITISSAGRCWTL--------------GEE 491 (700)
Q Consensus 429 pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~---~~GyaV~avd~~g~~w~~--------------~~e 491 (700)
|+.+++|+.|+=|-.+-| . .+.+.+. .-.|.|+++++.|++-.. ..+
T Consensus 1 ~~~li~~IPGNPGlv~fY-~---------------~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~Q 64 (266)
T PF10230_consen 1 PRPLIVFIPGNPGLVEFY-E---------------EFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQ 64 (266)
T ss_pred CcEEEEEECCCCChHHHH-H---------------HHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHH
Confidence 578899999997765322 1 1333344 569999999999865432 233
Q ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC
Q 040989 492 RLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR 533 (700)
Q Consensus 492 ~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~ 533 (700)
++-..+.+++...+....+.+++++|||.|++|++.+..+.+
T Consensus 65 I~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~ 106 (266)
T PF10230_consen 65 IEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLP 106 (266)
T ss_pred HHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhcc
Confidence 444555666666554335789999999999999999999876
No 127
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=96.87 E-value=0.0032 Score=69.99 Aligned_cols=40 Identities=18% Similarity=0.359 Sum_probs=25.8
Q ss_pred CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCC
Q 040989 429 PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGR 484 (700)
Q Consensus 429 pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~ 484 (700)
..|||||-||.+++...| ..++..|+.+||-|++++++++
T Consensus 99 ~~PvvIFSHGlgg~R~~y----------------S~~~~eLAS~GyVV~aieHrDg 138 (379)
T PF03403_consen 99 KFPVVIFSHGLGGSRTSY----------------SAICGELASHGYVVAAIEHRDG 138 (379)
T ss_dssp -EEEEEEE--TT--TTTT----------------HHHHHHHHHTT-EEEEE---SS
T ss_pred CCCEEEEeCCCCcchhhH----------------HHHHHHHHhCCeEEEEeccCCC
Confidence 369999999999996543 4578999999999999999863
No 128
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=96.87 E-value=0.0058 Score=70.56 Aligned_cols=112 Identities=21% Similarity=0.216 Sum_probs=80.5
Q ss_pred cCCeEEEEeecCCC---ceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCC-----CcCC
Q 040989 416 RNGTDVIWQIPDSP---KAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAG-----RCWT 487 (700)
Q Consensus 416 ~~G~~l~~~~P~~p---r~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g-----~~w~ 487 (700)
-+-.+|+.+.|... +.-|||++.+-... -.++ |-.+.++++.|+++||-|+.+|.++ +.|+
T Consensus 198 n~l~eLiqY~P~te~v~~~PLLIVPp~INK~-YIlD----------L~P~~SlVr~lv~qG~~VflIsW~nP~~~~r~~~ 266 (560)
T TIGR01839 198 NEVLELIQYKPITEQQHARPLLVVPPQINKF-YIFD----------LSPEKSFVQYCLKNQLQVFIISWRNPDKAHREWG 266 (560)
T ss_pred CCceEEEEeCCCCCCcCCCcEEEechhhhhh-heee----------cCCcchHHHHHHHcCCeEEEEeCCCCChhhcCCC
Confidence 34557777777532 45677788886542 1133 3334689999999999999999864 5677
Q ss_pred CcccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHH----Hhhcc---CcCeEEEE
Q 040989 488 LGEERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSA----LAKGL---RFSSIALM 540 (700)
Q Consensus 488 ~~~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~----la~~~---~~~glv~~ 540 (700)
+..-+..+.++|+.+.+..| ..++-++|+||||-+++. +++.. ++++++.+
T Consensus 267 ldDYv~~i~~Ald~V~~~tG--~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltll 324 (560)
T TIGR01839 267 LSTYVDALKEAVDAVRAITG--SRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYL 324 (560)
T ss_pred HHHHHHHHHHHHHHHHHhcC--CCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEee
Confidence 76666788889988888775 568999999999999996 55553 35565533
No 129
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=96.84 E-value=0.0014 Score=74.81 Aligned_cols=103 Identities=17% Similarity=0.053 Sum_probs=65.3
Q ss_pred CCeEEEEeecCC-----CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCC---
Q 040989 417 NGTDVIWQIPDS-----PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTL--- 488 (700)
Q Consensus 417 ~G~~l~~~~P~~-----pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~--- 488 (700)
|=..|-.+.|.. ..||+|++||++-..+.-. .....-...+...+.-|+.+.||=..++|
T Consensus 107 DCL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~------------~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~ 174 (535)
T PF00135_consen 107 DCLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGS------------FPPYDGASLAASKDVIVVTINYRLGAFGFLSL 174 (535)
T ss_dssp ---EEEEEEETSSSSTTSEEEEEEE--STTTSSCTT------------SGGGHTHHHHHHHTSEEEEE----HHHHH-BS
T ss_pred hHHHHhhhhccccccccccceEEEeecccccCCCcc------------cccccccccccCCCEEEEEecccccccccccc
Confidence 445554455752 3699999999976643320 00112345577899999999999433221
Q ss_pred -----c-cc--HHHHHHHHHHHHH---HcCCCCCCEEEEecChhHHHHHHHhhc
Q 040989 489 -----G-EE--RLVVREIIRWWVE---RHKLEKLPLVALGASSGGYFVSALAKG 531 (700)
Q Consensus 489 -----~-~e--~~~v~a~l~~~~~---~~~l~~~pl~l~G~S~GG~~a~~la~~ 531 (700)
+ .. ..|...+|+|+.+ .+|-++..|-|+|+|+||+.+..+...
T Consensus 175 ~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s 228 (535)
T PF00135_consen 175 GDLDAPSGNYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLS 228 (535)
T ss_dssp SSTTSHBSTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHG
T ss_pred cccccCchhhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeec
Confidence 1 11 3688999999864 578899999999999999999988776
No 130
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.67 E-value=0.0035 Score=64.97 Aligned_cols=86 Identities=23% Similarity=0.380 Sum_probs=63.0
Q ss_pred CCceEEEEeccCCCCCCcc--ccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCccc-HHHHHHHHHHHHH
Q 040989 428 SPKAVLFLAHGCNGRAVHF--WDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLGEE-RLVVREIIRWWVE 504 (700)
Q Consensus 428 ~pr~vvv~lHG~~~~~~~~--~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~~e-~~~v~a~l~~~~~ 504 (700)
.++.-|+.||=-|+++..| |.. -|| .-..++++.++||.-.+... ..++.++.+.+.+
T Consensus 5 ~~~~~L~cfP~AGGsa~~fr~W~~--------~lp-----------~~iel~avqlPGR~~r~~ep~~~di~~Lad~la~ 65 (244)
T COG3208 5 GARLRLFCFPHAGGSASLFRSWSR--------RLP-----------ADIELLAVQLPGRGDRFGEPLLTDIESLADELAN 65 (244)
T ss_pred CCCceEEEecCCCCCHHHHHHHHh--------hCC-----------chhheeeecCCCcccccCCcccccHHHHHHHHHH
Confidence 4577888888777777665 321 122 24788999999977654432 3666777777766
Q ss_pred HcC--CCCCCEEEEecChhHHHHHHHhhcc
Q 040989 505 RHK--LEKLPLVALGASSGGYFVSALAKGL 532 (700)
Q Consensus 505 ~~~--l~~~pl~l~G~S~GG~~a~~la~~~ 532 (700)
+.. +.+.|..++||||||.+|-.+|.++
T Consensus 66 el~~~~~d~P~alfGHSmGa~lAfEvArrl 95 (244)
T COG3208 66 ELLPPLLDAPFALFGHSMGAMLAFEVARRL 95 (244)
T ss_pred HhccccCCCCeeecccchhHHHHHHHHHHH
Confidence 654 5778999999999999999999986
No 131
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=96.63 E-value=0.007 Score=69.73 Aligned_cols=112 Identities=22% Similarity=0.246 Sum_probs=79.5
Q ss_pred ceeccCCeEEEEee--cC--CCceEEEEec--cCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCc
Q 040989 412 TVELRNGTDVIWQI--PD--SPKAVLFLAH--GCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRC 485 (700)
Q Consensus 412 ~~~~~~G~~l~~~~--P~--~pr~vvv~lH--G~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~ 485 (700)
.+...||.+|+..+ |+ .|.|+++..+ =+..+...++... .-+|+. ..++++||+|+-+|-||+.
T Consensus 23 ~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~------~~~p~~----~~~aa~GYavV~qDvRG~~ 92 (563)
T COG2936 23 MVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQL------SALPQP----AWFAAQGYAVVNQDVRGRG 92 (563)
T ss_pred eEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchh------hccccc----ceeecCceEEEEecccccc
Confidence 34578999997765 98 6789999999 3322221122110 001111 3689999999999999865
Q ss_pred CCC------c-ccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccCc
Q 040989 486 WTL------G-EERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLRF 534 (700)
Q Consensus 486 w~~------~-~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~~ 534 (700)
-|. . .|+.|--++|+|++++ ....-.+-++|.|-+|+-.+.+|+.-|.
T Consensus 93 ~SeG~~~~~~~~E~~Dg~D~I~Wia~Q-pWsNG~Vgm~G~SY~g~tq~~~Aa~~pP 147 (563)
T COG2936 93 GSEGVFDPESSREAEDGYDTIEWLAKQ-PWSNGNVGMLGLSYLGFTQLAAAALQPP 147 (563)
T ss_pred cCCcccceeccccccchhHHHHHHHhC-CccCCeeeeecccHHHHHHHHHHhcCCc
Confidence 442 2 3888999999998875 4556699999999999999999987543
No 132
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=96.62 E-value=0.02 Score=65.35 Aligned_cols=58 Identities=22% Similarity=0.304 Sum_probs=42.4
Q ss_pred cEEEEEcC-CCCcCCCc----------ccHHHHHHHHHHHHHHc-CCCCCCEEEEecChhHHHHHHHhhc
Q 040989 474 FAIITISS-AGRCWTLG----------EERLVVREIIRWWVERH-KLEKLPLVALGASSGGYFVSALAKG 531 (700)
Q Consensus 474 yaV~avd~-~g~~w~~~----------~e~~~v~a~l~~~~~~~-~l~~~pl~l~G~S~GG~~a~~la~~ 531 (700)
..++.+|+ .|.+++.. .-+.++..+++.|.+++ .+...|+|++|+|+||..+-.+|.+
T Consensus 122 ~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~ 191 (462)
T PTZ00472 122 AYVIYVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYR 191 (462)
T ss_pred cCeEEEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHH
Confidence 57888886 56665532 11366677777777766 3456899999999999999888876
No 133
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=96.56 E-value=0.013 Score=59.41 Aligned_cols=94 Identities=14% Similarity=0.120 Sum_probs=64.4
Q ss_pred ecCCCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCC--CcCCCcccHHHHHHHHHHH
Q 040989 425 IPDSPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAG--RCWTLGEERLVVREIIRWW 502 (700)
Q Consensus 425 ~P~~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g--~~w~~~~e~~~v~a~l~~~ 502 (700)
-|.+..++++|+||+-+..++.-. | .+++.-|+++||+|..++|-- ......+-..++..-++++
T Consensus 62 g~~~~~klfIfIHGGYW~~g~rk~----c---------lsiv~~a~~~gY~vasvgY~l~~q~htL~qt~~~~~~gv~fi 128 (270)
T KOG4627|consen 62 GSTNQAKLFIFIHGGYWQEGDRKM----C---------LSIVGPAVRRGYRVASVGYNLCPQVHTLEQTMTQFTHGVNFI 128 (270)
T ss_pred cCCCCccEEEEEecchhhcCchhc----c---------cchhhhhhhcCeEEEEeccCcCcccccHHHHHHHHHHHHHHH
Confidence 356667899999999888766432 2 235677999999999998741 1222223334455556666
Q ss_pred HHHcCCCCCCEEEEecChhHHHHHHHhhcc
Q 040989 503 VERHKLEKLPLVALGASSGGYFVSALAKGL 532 (700)
Q Consensus 503 ~~~~~l~~~pl~l~G~S~GG~~a~~la~~~ 532 (700)
..-+... .-+.+.|||+|+.+|.....+.
T Consensus 129 lk~~~n~-k~l~~gGHSaGAHLa~qav~R~ 157 (270)
T KOG4627|consen 129 LKYTENT-KVLTFGGHSAGAHLAAQAVMRQ 157 (270)
T ss_pred HHhcccc-eeEEEcccchHHHHHHHHHHHh
Confidence 6665433 3488999999999998877664
No 134
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=96.42 E-value=0.0098 Score=63.74 Aligned_cols=68 Identities=22% Similarity=0.181 Sum_probs=45.7
Q ss_pred HHHHHHHHHHCCcEEEEEcCCCCcCCC---cccHHHHHHHHHHHHHH---cCC-CCCCEEEEecChhHHHHHHHh
Q 040989 462 ERLLVLHALSRGFAIITISSAGRCWTL---GEERLVVREIIRWWVER---HKL-EKLPLVALGASSGGYFVSALA 529 (700)
Q Consensus 462 ~~~~~~~~~~~GyaV~avd~~g~~w~~---~~e~~~v~a~l~~~~~~---~~l-~~~pl~l~G~S~GG~~a~~la 529 (700)
+..++..++++||+|+++||.|-.-.+ ..+...+.+.++..++- .|+ ...+++++|+|.||.-++..|
T Consensus 15 e~~~l~~~L~~GyaVv~pDY~Glg~~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA 89 (290)
T PF03583_consen 15 EAPFLAAWLARGYAVVAPDYEGLGTPYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAA 89 (290)
T ss_pred HHHHHHHHHHCCCEEEecCCCCCCCcccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHH
Confidence 456889999999999999998733232 23334444444444432 233 346899999999998876544
No 135
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=96.37 E-value=0.035 Score=56.91 Aligned_cols=175 Identities=15% Similarity=0.118 Sum_probs=96.1
Q ss_pred CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCC-------------------------
Q 040989 429 PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAG------------------------- 483 (700)
Q Consensus 429 pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g------------------------- 483 (700)
.+.-|+++||..+++.-|..++ -++.+.+.++ +-.+.+|.+.
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Kt------------g~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~ 70 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKT------------GSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQN 70 (230)
T ss_pred CCceEEEecchhhccHHHHHHh------------hhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccc
Confidence 3578999999999987775431 2345555555 7777776531
Q ss_pred -CcCCCccc---------HHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccCcCeEEEEEecCCCCCCCCCC
Q 040989 484 -RCWTLGEE---------RLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLRFSSIALMIAEGLFDQMDIPE 553 (700)
Q Consensus 484 -~~w~~~~e---------~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~~~glv~~I~~G~~~~~~~~~ 553 (700)
..|....+ -..++.+.+++.+.-.+++ ++|+|+|++++.+|+..-. .++ . -.
T Consensus 71 ~~~Wf~~n~~~~~~~~~~eesl~yl~~~i~enGPFDG----llGFSQGA~laa~l~~~~~-~~~-------~------~~ 132 (230)
T KOG2551|consen 71 RYGWFSNNEASFTEYFGFEESLEYLEDYIKENGPFDG----LLGFSQGAALAALLAGLGQ-KGL-------P------YV 132 (230)
T ss_pred hhhhhcccccccccccChHHHHHHHHHHHHHhCCCcc----ccccchhHHHHHHhhcccc-cCC-------c------cc
Confidence 12321111 1335556666666656666 7999999999999988210 010 0 01
Q ss_pred CCCCeEE---EccCCChhHHHHHHHHHHHHHhCCCeeeEEEecCCcCCccccccCCCCCCHHHHHHHHHHHHHcccccC-
Q 040989 554 DYPPTLF---VHMPKDSYRQRKIGEFLVVLRNKGIDVAEIECMEFPLSRNFFTDRIPGLEQANSTKLFELFQEKGFIDE- 629 (700)
Q Consensus 554 ~yPP~lf---~hm~~D~~~~~~i~~~~~~L~~~gvp~~~i~~~~~~v~p~~f~~rdp~I~~~~S~~l~~al~~~g~ld~- 629 (700)
.-||.-| +.|-+=.- +-.......+..-+|++-|.. +.|-.|+.+.|..|++.....-+|-=
T Consensus 133 ~~P~~kF~v~~SGf~~~~---~~~~~~~~~~~i~~PSLHi~G-----------~~D~iv~~~~s~~L~~~~~~a~vl~Hp 198 (230)
T KOG2551|consen 133 KQPPFKFAVFISGFKFPS---KKLDESAYKRPLSTPSLHIFG-----------ETDTIVPSERSEQLAESFKDATVLEHP 198 (230)
T ss_pred CCCCeEEEEEEecCCCCc---chhhhhhhccCCCCCeeEEec-----------ccceeecchHHHHHHHhcCCCeEEecC
Confidence 2222222 12221110 000122223345666665544 77889999999999999886533322
Q ss_pred CCCcccCCch--hHHHHHHHh
Q 040989 630 NGYMRSDGRR--TRWKEALRE 648 (700)
Q Consensus 630 ~g~l~~d~r~--~~w~~~l~~ 648 (700)
.|.+.=..+. .+..+|+..
T Consensus 199 ggH~VP~~~~~~~~i~~fi~~ 219 (230)
T KOG2551|consen 199 GGHIVPNKAKYKEKIADFIQS 219 (230)
T ss_pred CCccCCCchHHHHHHHHHHHH
Confidence 4555422222 144454443
No 136
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=96.35 E-value=0.094 Score=53.91 Aligned_cols=151 Identities=16% Similarity=0.210 Sum_probs=97.8
Q ss_pred eeccCCeEEEEee-cCCCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcC-CCCcCCC--
Q 040989 413 VELRNGTDVIWQI-PDSPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISS-AGRCWTL-- 488 (700)
Q Consensus 413 ~~~~~G~~l~~~~-P~~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~-~g~~w~~-- 488 (700)
.+.++|.+.|.-- +.+++++|+|--=.|-+ .|.-...+..++..||.|+.||. +|.-|+.
T Consensus 22 ~~~v~gldaYv~gs~~~~~~li~i~DvfG~~----------------~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~ 85 (242)
T KOG3043|consen 22 EEEVGGLDAYVVGSTSSKKVLIVIQDVFGFQ----------------FPNTREGADKVALNGYTVLVPDFFRGDPWSPSL 85 (242)
T ss_pred eEeecCeeEEEecCCCCCeEEEEEEeeeccc----------------cHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCC
Confidence 4567787776644 44556666664322332 23345678888899999999997 5544432
Q ss_pred --------------cccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhcc-CcCeEEEEEecCCCCC-CCCC
Q 040989 489 --------------GEERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGL-RFSSIALMIAEGLFDQ-MDIP 552 (700)
Q Consensus 489 --------------~~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~-~~~glv~~I~~G~~~~-~~~~ 552 (700)
+.-..++.++++|++.+. +...|=++|+-+||.++..+.... .|.+++ ++-|.|.. .|..
T Consensus 86 ~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g--~~kkIGv~GfCwGak~vv~~~~~~~~f~a~v--~~hps~~d~~D~~ 161 (242)
T KOG3043|consen 86 QKSERPEWMKGHSPPKIWKDITAVVKWLKNHG--DSKKIGVVGFCWGAKVVVTLSAKDPEFDAGV--SFHPSFVDSADIA 161 (242)
T ss_pred ChhhhHHHHhcCCcccchhHHHHHHHHHHHcC--CcceeeEEEEeecceEEEEeeccchhheeee--EecCCcCChhHHh
Confidence 223478899999988543 677899999999999998888877 566655 34444432 2444
Q ss_pred CCCCCeEEEccCCChh-HHHHHHHHHHHHHhC
Q 040989 553 EDYPPTLFVHMPKDSY-RQRKIGEFLVVLRNK 583 (700)
Q Consensus 553 ~~yPP~lf~hm~~D~~-~~~~i~~~~~~L~~~ 583 (700)
..--|++|+-...|.. +...+....+.|+..
T Consensus 162 ~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~ 193 (242)
T KOG3043|consen 162 NVKAPILFLFAELDEDVPPKDVKAWEEKLKEN 193 (242)
T ss_pred cCCCCEEEEeecccccCCHHHHHHHHHHHhcC
Confidence 4446999988888876 233333344444443
No 137
>cd05992 PB1 The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes, such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domain, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as a noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants.
Probab=96.33 E-value=0.016 Score=49.52 Aligned_cols=63 Identities=21% Similarity=0.325 Sum_probs=50.2
Q ss_pred EEeCCeeceeecC-CCCCHHHHHHHHHhhcccCCceeEEEEEEEEeCCCCCceeeeecchhHHHHHhhcc
Q 040989 85 LYSGGQTKGIIVS-DDITYKELVDRLYGIVKVDTNEYVITMKSLYKANIPTMPVEIVDDDDVRFFIQENA 153 (700)
Q Consensus 85 ~Y~G~~~kgI~V~-~~~ty~~l~~~l~~~l~ID~~~~~l~~k~~~~~~~~~~pi~I~dD~Dv~~ml~~~~ 153 (700)
.|. ++.+-+.++ ..+||.+|.++|..+|++.. ..+.|+|+-. .-..++|.+|.||+.+++...
T Consensus 6 ~~~-~~~~~~~~~~~~~s~~~L~~~i~~~~~~~~--~~~~l~y~D~---e~d~v~l~sd~Dl~~a~~~~~ 69 (81)
T cd05992 6 KYG-GEIRRFVVVSRSISFEDLRSKIAEKFGLDA--VSFKLKYPDE---DGDLVTISSDEDLEEAIEEAR 69 (81)
T ss_pred Eec-CCCEEEEEecCCCCHHHHHHHHHHHhCCCC--CcEEEEeeCC---CCCEEEeCCHHHHHHHHHHHh
Confidence 354 455667777 99999999999999999986 4446676554 348899999999999999765
No 138
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=96.22 E-value=0.013 Score=59.68 Aligned_cols=88 Identities=17% Similarity=0.250 Sum_probs=67.5
Q ss_pred CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCC--------CcccHHHHHHHHH
Q 040989 429 PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWT--------LGEERLVVREIIR 500 (700)
Q Consensus 429 pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~--------~~~e~~~v~a~l~ 500 (700)
..-++|++||...+-.+... ..++.++.+.||.++.+|.+|.+-+ ...+++|+..+++
T Consensus 32 s~e~vvlcHGfrS~Kn~~~~--------------~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q 97 (269)
T KOG4667|consen 32 STEIVVLCHGFRSHKNAIIM--------------KNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQ 97 (269)
T ss_pred CceEEEEeeccccccchHHH--------------HHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHH
Confidence 35799999998766544321 3578899999999999998863322 3577899999999
Q ss_pred HHHHHcCCCCCCEEEEecChhHHHHHHHhhccC
Q 040989 501 WWVERHKLEKLPLVALGASSGGYFVSALAKGLR 533 (700)
Q Consensus 501 ~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~ 533 (700)
++...+ ..=-+++|||-||-+++.+|.++.
T Consensus 98 ~~s~~n---r~v~vi~gHSkGg~Vvl~ya~K~~ 127 (269)
T KOG4667|consen 98 YFSNSN---RVVPVILGHSKGGDVVLLYASKYH 127 (269)
T ss_pred HhccCc---eEEEEEEeecCccHHHHHHHHhhc
Confidence 987643 222378899999999999999864
No 139
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.22 E-value=0.0067 Score=65.26 Aligned_cols=84 Identities=18% Similarity=0.151 Sum_probs=55.7
Q ss_pred CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHH-HHHCCcEEEEEcCCCCcCCCc-------ccHHHHHHHHH
Q 040989 429 PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLH-ALSRGFAIITISSAGRCWTLG-------EERLVVREIIR 500 (700)
Q Consensus 429 pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~-~~~~GyaV~avd~~g~~w~~~-------~e~~~v~a~l~ 500 (700)
..|.++++||.-+++.+|-. +.+. ..+.|=-|+++|.|.|+.+.. .-+.|+...++
T Consensus 51 ~~Pp~i~lHGl~GS~~Nw~s----------------v~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~ 114 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKENWRS----------------VAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFID 114 (315)
T ss_pred CCCceEEecccccCCCCHHH----------------HHHHhcccccCceEEEecccCCCCccccccCHHHHHHHHHHHHH
Confidence 46889999999999877532 2222 234455899999998776531 22355665555
Q ss_pred HHHHHcCCCCCCEEEEecChhHHHHHHHhhc
Q 040989 501 WWVERHKLEKLPLVALGASSGGYFVSALAKG 531 (700)
Q Consensus 501 ~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~ 531 (700)
...... .-.|+++.|||||| +.+.++..
T Consensus 115 ~v~~~~--~~~~~~l~GHsmGG-~~~~m~~t 142 (315)
T KOG2382|consen 115 GVGGST--RLDPVVLLGHSMGG-VKVAMAET 142 (315)
T ss_pred Hccccc--ccCCceecccCcch-HHHHHHHH
Confidence 554432 35799999999999 44444443
No 140
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=96.14 E-value=0.047 Score=61.68 Aligned_cols=154 Identities=19% Similarity=0.242 Sum_probs=104.5
Q ss_pred CCeEEEEee-cCCC-ceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEE-cCC--CCcCCCccc
Q 040989 417 NGTDVIWQI-PDSP-KAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITI-SSA--GRCWTLGEE 491 (700)
Q Consensus 417 ~G~~l~~~~-P~~p-r~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~av-d~~--g~~w~~~~e 491 (700)
.+.+++|+. |.+- .|+.|.|-|.-. ++.|--+ -.+.+.|-..+.+ |+| |+++=.+++
T Consensus 274 ~reEi~yYFnPGD~KPPL~VYFSGyR~-aEGFEgy-----------------~MMk~Lg~PfLL~~DpRleGGaFYlGs~ 335 (511)
T TIGR03712 274 KRQEFIYYFNPGDFKPPLNVYFSGYRP-AEGFEGY-----------------FMMKRLGAPFLLIGDPRLEGGAFYLGSD 335 (511)
T ss_pred CCCeeEEecCCcCCCCCeEEeeccCcc-cCcchhH-----------------HHHHhcCCCeEEeeccccccceeeeCcH
Confidence 366887777 7653 478899999855 4445211 1123334333333 565 666654443
Q ss_pred --HHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccCcCeEEEE--------Ee-------cCCCCCC-CC--
Q 040989 492 --RLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLRFSSIALM--------IA-------EGLFDQM-DI-- 551 (700)
Q Consensus 492 --~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~~~glv~~--------I~-------~G~~~~~-~~-- 551 (700)
-..+.++|+...+.+|++..-++|.|.|||.+-|+.+|+++.+.|+++. |+ .+.|... |+
T Consensus 336 eyE~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~P~AIiVgKPL~NLGtiA~n~rL~RP~~F~TslDvl~ 415 (511)
T TIGR03712 336 EYEQGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLSPHAIIVGKPLVNLGTIASRMRLDRPDEFGTALDILL 415 (511)
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCCCceEEEcCcccchhhhhccccccCCCCCchHHHhHH
Confidence 3678888999999999999999999999999999999999988886531 11 2333321 10
Q ss_pred -----------------------CCCCC--CeEEEccCCChhHHHHHHHHHHHHHhCCCeee
Q 040989 552 -----------------------PEDYP--PTLFVHMPKDSYRQRKIGEFLVVLRNKGIDVA 588 (700)
Q Consensus 552 -----------------------~~~yP--P~lf~hm~~D~~~~~~i~~~~~~L~~~gvp~~ 588 (700)
.+++- ...+..|..|.+...+..+.+..|.+.++++.
T Consensus 416 ~~~g~~s~~~i~~ln~~fW~~f~~~d~S~T~F~i~YM~~DDYD~~A~~~L~~~l~~~~~~v~ 477 (511)
T TIGR03712 416 LNTGGTSSEDVVKLDNRFWKKFKKSDLSKTTFAIAYMKNDDYDPTAFQDLLPYLSKQGAQVM 477 (511)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHhhcCcccceEEEEeeccccCCHHHHHHHHHHHHhcCCEEE
Confidence 13333 33446888999988888889999998888843
No 141
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=96.13 E-value=0.021 Score=63.06 Aligned_cols=89 Identities=16% Similarity=0.136 Sum_probs=64.0
Q ss_pred ceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCC-----CcCCCcccHHHHHHHHHHHHH
Q 040989 430 KAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAG-----RCWTLGEERLVVREIIRWWVE 504 (700)
Q Consensus 430 r~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g-----~~w~~~~e~~~v~a~l~~~~~ 504 (700)
.++|+++||+|---.-.-.+ -+-+.-...+++ ..+++++||.- +....+.+...+.+..+++.+
T Consensus 122 DpVlIYlHGGGY~l~~~p~q----------i~~L~~i~~~l~-~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~ 190 (374)
T PF10340_consen 122 DPVLIYLHGGGYFLGTTPSQ----------IEFLLNIYKLLP-EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVE 190 (374)
T ss_pred CcEEEEEcCCeeEecCCHHH----------HHHHHHHHHHcC-CCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHh
Confidence 59999999986553221100 111222344555 66999999863 455678999999999999996
Q ss_pred HcCCCCCCEEEEecChhHHHHHHHhhc
Q 040989 505 RHKLEKLPLVALGASSGGYFVSALAKG 531 (700)
Q Consensus 505 ~~~l~~~pl~l~G~S~GG~~a~~la~~ 531 (700)
..| ...++|+|-|+||.+++.+...
T Consensus 191 ~~G--~~nI~LmGDSAGGnL~Ls~Lqy 215 (374)
T PF10340_consen 191 SEG--NKNIILMGDSAGGNLALSFLQY 215 (374)
T ss_pred ccC--CCeEEEEecCccHHHHHHHHHH
Confidence 665 4689999999999999988765
No 142
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=96.12 E-value=0.018 Score=61.51 Aligned_cols=42 Identities=29% Similarity=0.574 Sum_probs=33.2
Q ss_pred ceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCC--cCC
Q 040989 430 KAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGR--CWT 487 (700)
Q Consensus 430 r~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~--~w~ 487 (700)
-|+|||-||.|+...- || ++.-.++.+||-|.|+++|++ ||.
T Consensus 118 ~PvvvFSHGLggsRt~---YS-------------a~c~~LAShG~VVaavEHRD~SA~~T 161 (399)
T KOG3847|consen 118 YPVVVFSHGLGGSRTL---YS-------------AYCTSLASHGFVVAAVEHRDRSACWT 161 (399)
T ss_pred ccEEEEecccccchhh---HH-------------HHhhhHhhCceEEEEeecccCcceeE
Confidence 5999999999998543 32 355668899999999999974 664
No 143
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=96.09 E-value=0.052 Score=53.83 Aligned_cols=107 Identities=17% Similarity=0.192 Sum_probs=62.8
Q ss_pred CCCEEEEecChhHHHHHHHhhcc--CcCeEEEEEecCCCCCCCCCCCCCCeEEEccCCChhHHHHHHHHHHHHHhCCCee
Q 040989 510 KLPLVALGASSGGYFVSALAKGL--RFSSIALMIAEGLFDQMDIPEDYPPTLFVHMPKDSYRQRKIGEFLVVLRNKGIDV 587 (700)
Q Consensus 510 ~~pl~l~G~S~GG~~a~~la~~~--~~~glv~~I~~G~~~~~~~~~~yPP~lf~hm~~D~~~~~~i~~~~~~L~~~gvp~ 587 (700)
..|+||.+||+|+..++.++... ++.|+. +| .++..+. +...|+.+ |.-|+++.. ..--|+
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~~~V~Gal-LV-Appd~~~--~~~~~~~~---~tf~~~p~~----------~lpfps 120 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQRQVAGAL-LV-APPDVSR--PEIRPKHL---MTFDPIPRE----------PLPFPS 120 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhhhccceEE-Ee-cCCCccc--cccchhhc---cccCCCccc----------cCCCce
Confidence 66899999999999999998764 555643 22 2221110 12222322 122222100 012233
Q ss_pred eEEEecCCcCCccccccCCCCCCHHHHHHHHHHHHHc-ccccCCCCcccCCchhHHHH
Q 040989 588 AEIECMEFPLSRNFFTDRIPGLEQANSTKLFELFQEK-GFIDENGYMRSDGRRTRWKE 644 (700)
Q Consensus 588 ~~i~~~~~~v~p~~f~~rdp~I~~~~S~~l~~al~~~-g~ld~~g~l~~d~r~~~w~~ 644 (700)
..+. +..||.++.+.++.+.++.-.. -.+-..|.+..+....+|-.
T Consensus 121 ~vva-----------SrnDp~~~~~~a~~~a~~wgs~lv~~g~~GHiN~~sG~g~wpe 167 (181)
T COG3545 121 VVVA-----------SRNDPYVSYEHAEDLANAWGSALVDVGEGGHINAESGFGPWPE 167 (181)
T ss_pred eEEE-----------ecCCCCCCHHHHHHHHHhccHhheecccccccchhhcCCCcHH
Confidence 3333 3789999999999999998744 33333677777777666654
No 144
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=96.05 E-value=0.0096 Score=64.14 Aligned_cols=76 Identities=14% Similarity=0.280 Sum_probs=62.1
Q ss_pred HHHCCcEEEEEcCCC--CcCCCc---ccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC-cCeEEEEEe
Q 040989 469 ALSRGFAIITISSAG--RCWTLG---EERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR-FSSIALMIA 542 (700)
Q Consensus 469 ~~~~GyaV~avd~~g--~~w~~~---~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~-~~glv~~I~ 542 (700)
=++.||.|+...++| .+.+.+ .+...+.++++..++..|+....++++|-|.||+-++.+|..+| +.| +|+
T Consensus 264 P~~lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPdVka---vvL 340 (517)
T KOG1553|consen 264 PAQLGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPDVKA---VVL 340 (517)
T ss_pred hHHhCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCCceE---EEe
Confidence 467899999999987 333332 45678889999999999999999999999999999999999987 445 566
Q ss_pred cCCCC
Q 040989 543 EGLFD 547 (700)
Q Consensus 543 ~G~~~ 547 (700)
+..|+
T Consensus 341 DAtFD 345 (517)
T KOG1553|consen 341 DATFD 345 (517)
T ss_pred ecchh
Confidence 76664
No 145
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=96.03 E-value=0.26 Score=53.47 Aligned_cols=109 Identities=10% Similarity=0.064 Sum_probs=69.6
Q ss_pred ccCCeEE-EEeecC---CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCC---
Q 040989 415 LRNGTDV-IWQIPD---SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWT--- 487 (700)
Q Consensus 415 ~~~G~~l-~~~~P~---~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~--- 487 (700)
..++.++ ..+.|. .++|.|+++||.+.++.+ +. +- -.+.+.|.++|++.+++....--+.
T Consensus 68 ~~~~~~flaL~~~~~~~~~~G~vIilp~~g~~~d~--p~---------~i--~~LR~~L~~~GW~Tlsit~P~~~~~~~p 134 (310)
T PF12048_consen 68 QAGEERFLALWRPANSAKPQGAVIILPDWGEHPDW--PG---------LI--APLRRELPDHGWATLSITLPDPAPPASP 134 (310)
T ss_pred ecCCEEEEEEEecccCCCCceEEEEecCCCCCCCc--Hh---------HH--HHHHHHhhhcCceEEEecCCCcccccCC
Confidence 3345444 455565 579999999999999743 21 11 2378899999999999876541111
Q ss_pred ------------------Cc----------------ccHHHHHHHHHHHH---HHcCCCCCCEEEEecChhHHHHHHHhh
Q 040989 488 ------------------LG----------------EERLVVREIIRWWV---ERHKLEKLPLVALGASSGGYFVSALAK 530 (700)
Q Consensus 488 ------------------~~----------------~e~~~v~a~l~~~~---~~~~l~~~pl~l~G~S~GG~~a~~la~ 530 (700)
-+ .....+.+.++.+. +++ .+.+++++|+.+|++++..+..
T Consensus 135 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~--~~~~ivlIg~G~gA~~~~~~la 212 (310)
T PF12048_consen 135 NRATEAEEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQ--GGKNIVLIGHGTGAGWAARYLA 212 (310)
T ss_pred ccCCCCCCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhc--CCceEEEEEeChhHHHHHHHHh
Confidence 00 00122333333332 233 3566999999999999999988
Q ss_pred ccC---cCeEE
Q 040989 531 GLR---FSSIA 538 (700)
Q Consensus 531 ~~~---~~glv 538 (700)
..+ ++++|
T Consensus 213 ~~~~~~~daLV 223 (310)
T PF12048_consen 213 EKPPPMPDALV 223 (310)
T ss_pred cCCCcccCeEE
Confidence 864 45554
No 146
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.99 E-value=0.013 Score=61.88 Aligned_cols=87 Identities=20% Similarity=0.192 Sum_probs=59.7
Q ss_pred eEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCc---CCCcccHHHHHHHHHHHHHHcC
Q 040989 431 AVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRC---WTLGEERLVVREIIRWWVERHK 507 (700)
Q Consensus 431 ~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~---w~~~~e~~~v~a~l~~~~~~~~ 507 (700)
+.||+|||.++.+.-|.+ +.. +++.-.-|++++++|-. ....+..+.++..++.+++..
T Consensus 1 ~pLF~fhp~~G~~~~~~~----------------L~~-~l~~~~~v~~l~a~g~~~~~~~~~~l~~~a~~yv~~Ir~~Q- 62 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAP----------------LAA-ALGPLLPVYGLQAPGYGAGEQPFASLDDMAAAYVAAIRRVQ- 62 (257)
T ss_pred CCEEEEcCCCCcHHHHHH----------------HHH-HhccCceeeccccCcccccccccCCHHHHHHHHHHHHHHhC-
Confidence 368999999998644321 333 33444788888887632 223333355566666666665
Q ss_pred CCCCCEEEEecChhHHHHHHHhhccCcCe
Q 040989 508 LEKLPLVALGASSGGYFVSALAKGLRFSS 536 (700)
Q Consensus 508 l~~~pl~l~G~S~GG~~a~~la~~~~~~g 536 (700)
+.-|.+|+|.|+||++|..+|.++.-.|
T Consensus 63 -P~GPy~L~G~S~GG~vA~evA~qL~~~G 90 (257)
T COG3319 63 -PEGPYVLLGWSLGGAVAFEVAAQLEAQG 90 (257)
T ss_pred -CCCCEEEEeeccccHHHHHHHHHHHhCC
Confidence 4559999999999999999999874444
No 147
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=95.84 E-value=0.026 Score=64.92 Aligned_cols=165 Identities=21% Similarity=0.209 Sum_probs=108.0
Q ss_pred eccCCeEEEEeec-----CCCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCC----
Q 040989 414 ELRNGTDVIWQIP-----DSPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGR---- 484 (700)
Q Consensus 414 ~~~~G~~l~~~~P-----~~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~---- 484 (700)
.+.||+++-|.+- .++.+++|+.=|+-.-+ .-|. -....+..+++|..-+..+-||.
T Consensus 400 tSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vs--ltP~------------fs~~~~~WLerGg~~v~ANIRGGGEfG 465 (648)
T COG1505 400 TSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNIS--LTPR------------FSGSRKLWLERGGVFVLANIRGGGEFG 465 (648)
T ss_pred EcCCCccccEEEEecCCcCCCCceEEEeccccccc--cCCc------------cchhhHHHHhcCCeEEEEecccCCccC
Confidence 3689999855543 24677877655553332 2221 11234889999999988888874
Q ss_pred -cCCC-------cccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEEE------EEe-----c
Q 040989 485 -CWTL-------GEERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIAL------MIA-----E 543 (700)
Q Consensus 485 -~w~~-------~~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv~------~I~-----~ 543 (700)
.|.. ..-.+|..|+.++++++.=-.+..+-+.|-|-||.++...-++.| |.|++. ||. -
T Consensus 466 p~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh~l~a 545 (648)
T COG1505 466 PEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYHLLTA 545 (648)
T ss_pred HHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhhccccc
Confidence 3421 223478899999999874225568899999999998876655554 666543 220 0
Q ss_pred C-----------------------CCCCCCCCCCCCCeEEEccCCChhH-HHHHHHHHHHHHhCCCeeeEEEe
Q 040989 544 G-----------------------LFDQMDIPEDYPPTLFVHMPKDSYR-QRKIGEFLVVLRNKGIDVAEIEC 592 (700)
Q Consensus 544 G-----------------------~~~~~~~~~~yPP~lf~hm~~D~~~-~~~i~~~~~~L~~~gvp~~~i~~ 592 (700)
| +++.......|||+|+....+|..+ .+-+......|+..|.|+.+..-
T Consensus 546 G~sW~~EYG~Pd~P~d~~~l~~YSPy~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~pv~~~e~ 618 (648)
T COG1505 546 GSSWIAEYGNPDDPEDRAFLLAYSPYHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGAPVLLREE 618 (648)
T ss_pred chhhHhhcCCCCCHHHHHHHHhcCchhcCCccccCCCeEEEcccccccccchHHHHHHHHHHhcCCceEEEee
Confidence 1 0000112478999999999987664 34455567888999999987655
No 148
>COG3150 Predicted esterase [General function prediction only]
Probab=95.73 E-value=0.1 Score=51.50 Aligned_cols=175 Identities=13% Similarity=0.092 Sum_probs=95.9
Q ss_pred EEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCcccHHHHHHHHHHHHHHcCCCCCC
Q 040989 433 LFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLGEERLVVREIIRWWVERHKLEKLP 512 (700)
Q Consensus 433 vv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~~e~~~v~a~l~~~~~~~~l~~~p 512 (700)
|+++||-..+.++.- -+.+-+.+...+-++-. .+-..+.++..+.+.++.++++++ +..
T Consensus 2 ilYlHGFnSSP~shk--------------a~l~~q~~~~~~~~i~y-----~~p~l~h~p~~a~~ele~~i~~~~--~~~ 60 (191)
T COG3150 2 ILYLHGFNSSPGSHK--------------AVLLLQFIDEDVRDIEY-----STPHLPHDPQQALKELEKAVQELG--DES 60 (191)
T ss_pred eEEEecCCCCcccHH--------------HHHHHHHHhccccceee-----ecCCCCCCHHHHHHHHHHHHHHcC--CCC
Confidence 789999877765431 12222222222222211 233346677778888888898885 233
Q ss_pred EEEEecChhHHHHHHHhhccCcCeEEEE-------EecCCCCCCCCCCCCCCeEEEccCCChhHHHHHHHHHHHHHhCCC
Q 040989 513 LVALGASSGGYFVSALAKGLRFSSIALM-------IAEGLFDQMDIPEDYPPTLFVHMPKDSYRQRKIGEFLVVLRNKGI 585 (700)
Q Consensus 513 l~l~G~S~GG~~a~~la~~~~~~glv~~-------I~~G~~~~~~~~~~yPP~lf~hm~~D~~~~~~i~~~~~~L~~~gv 585 (700)
..+.|.|+|||.|..|+..+.+.+++.= -+.|+++. ....|----++.-++|... -.....+....
T Consensus 61 p~ivGssLGGY~At~l~~~~Girav~~NPav~P~e~l~gylg~--~en~ytg~~y~le~~hI~~-----l~~~~~~~l~~ 133 (191)
T COG3150 61 PLIVGSSLGGYYATWLGFLCGIRAVVFNPAVRPYELLTGYLGR--PENPYTGQEYVLESRHIAT-----LCVLQFRELNR 133 (191)
T ss_pred ceEEeecchHHHHHHHHHHhCChhhhcCCCcCchhhhhhhcCC--CCCCCCcceEEeehhhHHH-----HHHhhccccCC
Confidence 7889999999999999999887775410 01111110 0001111111122222222 12222344455
Q ss_pred eeeEEEecCCcCCccccccC-CCCCCHHHHHHHHHHHHHcccccC-CCCcccCCchh-HHHHHH
Q 040989 586 DVAEIECMEFPLSRNFFTDR-IPGLEQANSTKLFELFQEKGFIDE-NGYMRSDGRRT-RWKEAL 646 (700)
Q Consensus 586 p~~~i~~~~~~v~p~~f~~r-dp~I~~~~S~~l~~al~~~g~ld~-~g~l~~d~r~~-~w~~~l 646 (700)
|-.+... ++. |..++.+++.+-|....+..+=++ .+| +.-.|+. ..++|+
T Consensus 134 p~~~~lL----------~qtgDEvLDyr~a~a~y~~~~~~V~dgg~H~F-~~f~~~l~~i~aF~ 186 (191)
T COG3150 134 PRCLVLL----------SQTGDEVLDYRQAVAYYHPCYEIVWDGGDHKF-KGFSRHLQRIKAFK 186 (191)
T ss_pred CcEEEee----------cccccHHHHHHHHHHHhhhhhheeecCCCccc-cchHHhHHHHHHHh
Confidence 5555544 445 899999999999999877655444 333 3333343 555544
No 149
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=95.72 E-value=0.021 Score=64.67 Aligned_cols=67 Identities=10% Similarity=0.084 Sum_probs=50.6
Q ss_pred HHHHHHHHCCcEEEEEcCCCCcCCC--c----ccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC
Q 040989 464 LLVLHALSRGFAIITISSAGRCWTL--G----EERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR 533 (700)
Q Consensus 464 ~~~~~~~~~GyaV~avd~~g~~w~~--~----~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~ 533 (700)
.++..|.+.||.+ +.|..|..+.| . ....++++.++.+.++++ ..|++++||||||.++..++...+
T Consensus 112 ~li~~L~~~GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g--~~kV~LVGHSMGGlva~~fl~~~p 184 (440)
T PLN02733 112 DMIEQLIKWGYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASG--GKKVNIISHSMGGLLVKCFMSLHS 184 (440)
T ss_pred HHHHHHHHcCCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcC--CCCEEEEEECHhHHHHHHHHHHCC
Confidence 3788999999966 67776644433 2 224677888888877764 679999999999999999887654
No 150
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=95.71 E-value=0.061 Score=58.47 Aligned_cols=111 Identities=12% Similarity=0.169 Sum_probs=75.1
Q ss_pred CCeEE---EEeecC-CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCC----
Q 040989 417 NGTDV---IWQIPD-SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTL---- 488 (700)
Q Consensus 417 ~G~~l---~~~~P~-~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~---- 488 (700)
|+..+ ....|. .+.-.++++=|+++.-+... |.. -++-.+.+.+.+.|-.|+.++|+|=+.+.
T Consensus 120 D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~--------~~~-~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~s 190 (365)
T PF05677_consen 120 DGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRA--------MLD-YKDDWIQRFAKELGANVLVFNYPGVGSSTGPPS 190 (365)
T ss_pred CCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhh--------hhc-cccHHHHHHHHHcCCcEEEECCCccccCCCCCC
Confidence 55544 233465 35568888888887754421 000 00124677788899999999999844332
Q ss_pred ccc-HHHHHHHHHHHHHH-cCCCCCCEEEEecChhHHHHHHHhhccCcCe
Q 040989 489 GEE-RLVVREIIRWWVER-HKLEKLPLVALGASSGGYFVSALAKGLRFSS 536 (700)
Q Consensus 489 ~~e-~~~v~a~l~~~~~~-~~l~~~pl~l~G~S~GG~~a~~la~~~~~~g 536 (700)
..+ +.+..+++++++++ .|.....++++|+|+||++++....+..+.+
T Consensus 191 ~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~~~ 240 (365)
T PF05677_consen 191 RKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEVLKG 240 (365)
T ss_pred HHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhccccc
Confidence 223 47788999999874 4777889999999999999987655554443
No 151
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=95.58 E-value=0.08 Score=61.67 Aligned_cols=150 Identities=19% Similarity=0.243 Sum_probs=91.1
Q ss_pred CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCC-----CcCCC-------cccHHHH
Q 040989 428 SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAG-----RCWTL-------GEERLVV 495 (700)
Q Consensus 428 ~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g-----~~w~~-------~~e~~~v 495 (700)
.+.|+|+.-=|+-+...+-.. .....-|++|||.-...--|| +.|-- ..-..|.
T Consensus 446 g~~p~lLygYGaYG~s~~p~F--------------s~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DF 511 (682)
T COG1770 446 GSAPLLLYGYGAYGISMDPSF--------------SIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDF 511 (682)
T ss_pred CCCcEEEEEeccccccCCcCc--------------ccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHH
Confidence 457888888887555433211 123456899998544433354 44421 1113677
Q ss_pred HHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEEEEE-----ecC------CCCC--------------
Q 040989 496 REIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIALMI-----AEG------LFDQ-------------- 548 (700)
Q Consensus 496 ~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv~~I-----~~G------~~~~-------------- 548 (700)
.++.++++++--.+...+++.|-|+||.+...++..-| |+|++.++ +.. +++.
T Consensus 512 Ia~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~slPLT~~E~~EWGNP~d~e~ 591 (682)
T COG1770 512 IAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSLPLTVTEWDEWGNPLDPEY 591 (682)
T ss_pred HHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCCCCCccchhhhCCcCCHHH
Confidence 78888888764336779999999999999888877644 66655332 111 1110
Q ss_pred ---C-------CC-CCCCCCeEEEccCCChhH-HHHHHHHHHHHHhCC---CeeeEEE
Q 040989 549 ---M-------DI-PEDYPPTLFVHMPKDSYR-QRKIGEFLVVLRNKG---IDVAEIE 591 (700)
Q Consensus 549 ---~-------~~-~~~yPP~lf~hm~~D~~~-~~~i~~~~~~L~~~g---vp~~~i~ 591 (700)
+ .+ ...|||+|...+-.|+.+ -..-++-+++||..+ -|.++-.
T Consensus 592 y~yikSYSPYdNV~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlkt 649 (682)
T COG1770 592 YDYIKSYSPYDNVEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKT 649 (682)
T ss_pred HHHHhhcCchhccccCCCCceEEEccccCCccccchHHHHHHHHhhcccCCCcEEEEe
Confidence 0 12 578999999999999875 233444555565554 4444443
No 152
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=95.58 E-value=0.033 Score=62.29 Aligned_cols=108 Identities=20% Similarity=0.328 Sum_probs=79.7
Q ss_pred eeccCCeEEEEe-ecC--CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCc----
Q 040989 413 VELRNGTDVIWQ-IPD--SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRC---- 485 (700)
Q Consensus 413 ~~~~~G~~l~~~-~P~--~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~---- 485 (700)
+.+.||--|-++ +|. .+||+|++.||.-.++..|.. -| |+ .++.-.|+++||-|=.=..||.-
T Consensus 53 V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~--------n~-p~-~sLaf~LadaGYDVWLgN~RGn~ySr~ 122 (403)
T KOG2624|consen 53 VTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVL--------NG-PE-QSLAFLLADAGYDVWLGNNRGNTYSRK 122 (403)
T ss_pred EEccCCeEEEEeeecCCCCCCCcEEEeecccccccccee--------cC-cc-ccHHHHHHHcCCceeeecCcCcccchh
Confidence 457778655443 454 579999999999888766643 33 54 46888899999999998888732
Q ss_pred ------------CCCc--c-cHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhcc
Q 040989 486 ------------WTLG--E-ERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGL 532 (700)
Q Consensus 486 ------------w~~~--~-e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~ 532 (700)
|.|. + -.-|+.|+|+.+.+..+ ...++..|||+|+.....+....
T Consensus 123 h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~--~~kl~yvGHSQGtt~~fv~lS~~ 182 (403)
T KOG2624|consen 123 HKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTG--QEKLHYVGHSQGTTTFFVMLSER 182 (403)
T ss_pred hcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhcc--ccceEEEEEEccchhheehhccc
Confidence 3322 1 12689999999988774 56899999999999887766553
No 153
>PRK04940 hypothetical protein; Provisional
Probab=95.51 E-value=0.06 Score=53.83 Aligned_cols=28 Identities=14% Similarity=0.230 Sum_probs=25.5
Q ss_pred CCEEEEecChhHHHHHHHhhccCcCeEE
Q 040989 511 LPLVALGASSGGYFVSALAKGLRFSSIA 538 (700)
Q Consensus 511 ~pl~l~G~S~GG~~a~~la~~~~~~glv 538 (700)
.|+.++|.|+||+.|..||.++...+++
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~~aVL 87 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGIRQVI 87 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCCCEEE
Confidence 5899999999999999999999888854
No 154
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=95.35 E-value=0.043 Score=55.25 Aligned_cols=69 Identities=19% Similarity=0.297 Sum_probs=56.3
Q ss_pred HHHHHHHHHCCcEEEEEcCCCCcCCC--ccc-HHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC
Q 040989 463 RLLVLHALSRGFAIITISSAGRCWTL--GEE-RLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR 533 (700)
Q Consensus 463 ~~~~~~~~~~GyaV~avd~~g~~w~~--~~e-~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~ 533 (700)
..++..|.++|+.|+.+|+..-.|+. +++ +.|+..+++...++++ ..+++|.|.|.|+-+.-.+..++|
T Consensus 19 ~~~a~~l~~~G~~VvGvdsl~Yfw~~rtP~~~a~Dl~~~i~~y~~~w~--~~~vvLiGYSFGADvlP~~~nrLp 90 (192)
T PF06057_consen 19 KQIAEALAKQGVPVVGVDSLRYFWSERTPEQTAADLARIIRHYRARWG--RKRVVLIGYSFGADVLPFIYNRLP 90 (192)
T ss_pred HHHHHHHHHCCCeEEEechHHHHhhhCCHHHHHHHHHHHHHHHHHHhC--CceEEEEeecCCchhHHHHHhhCC
Confidence 45899999999999999998777753 333 4788999999998884 779999999999977766666554
No 155
>PF00564 PB1: PB1 domain; InterPro: IPR000270 The Phox and Bem1p domain, is present in many eukaryotic cytoplasmic signalling proteins. The domain adopts a beta-grasp fold, similar to that found in ubiquitin and Ras-binding domains. A motif, variously termed OPR, PC and AID, represents the most conserved region of the majority of PB1 domains, and is necessary for PB1 domain function. This function is the formation of PB1 domain heterodimers, although not all PB1 domain pairs associate.; GO: 0005515 protein binding; PDB: 1IPG_A 1IP9_A 2KFK_A 1WMH_A 1VD2_A 1WI0_A 1OEY_C 1PQS_A 1Q1O_A 1TZ1_A ....
Probab=95.35 E-value=0.054 Score=46.56 Aligned_cols=76 Identities=16% Similarity=0.283 Sum_probs=53.7
Q ss_pred EeCCeeceeecCCCCCHHHHHHHHHhhcccCCceeEEEEEEEEeCCCCCceeeeecchhHHHHHhhccCCCCCCCccEEE
Q 040989 86 YSGGQTKGIIVSDDITYKELVDRLYGIVKVDTNEYVITMKSLYKANIPTMPVEIVDDDDVRFFIQENAAHPTELRSPICI 165 (700)
Q Consensus 86 Y~G~~~kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l~~k~~~~~~~~~~pi~I~dD~Dv~~ml~~~~~~~~~~~~~L~i 165 (700)
|.|.....+.++..+||++|..+|..+|++....+ .++| .- ..-..++|.+|.||..+++.....+ . -+|-+
T Consensus 8 ~~~~~~~~~~~~~~~s~~~L~~~i~~~~~~~~~~~--~l~Y--~D-~dgD~V~i~sd~Dl~~a~~~~~~~~--~-~~lrl 79 (84)
T PF00564_consen 8 YGGDIRRIISLPSDVSFDDLRSKIREKFGLLDEDF--QLKY--KD-EDGDLVTISSDEDLQEAIEQAKESG--S-KTLRL 79 (84)
T ss_dssp ETTEEEEEEEECSTSHHHHHHHHHHHHHTTSTSSE--EEEE--EE-TTSSEEEESSHHHHHHHHHHHHHCT--T-SCEEE
T ss_pred ECCeeEEEEEcCCCCCHHHHHHHHHHHhCCCCccE--EEEe--eC-CCCCEEEeCCHHHHHHHHHHHHhcC--C-CcEEE
Confidence 44433335889999999999999999999985544 5554 32 2348899999999999998654321 1 15666
Q ss_pred EEEe
Q 040989 166 TIER 169 (700)
Q Consensus 166 ~ve~ 169 (700)
.|+.
T Consensus 80 ~v~~ 83 (84)
T PF00564_consen 80 FVQD 83 (84)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6554
No 156
>cd06406 PB1_P67 A PB1 domain is present in p67 proteins which forms a signaling complex with p40, a crucial step for activation of NADPH oxidase during phagocytosis. PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes . A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants. The p67 proteins contain
Probab=95.32 E-value=0.068 Score=46.36 Aligned_cols=62 Identities=15% Similarity=0.210 Sum_probs=47.4
Q ss_pred EEeCCeeceeecCCCCCHHHHHHHHHhhcccCCceeEEEEEEEEeCCCCCceeeeecchhHHHHHhhcc
Q 040989 85 LYSGGQTKGIIVSDDITYKELVDRLYGIVKVDTNEYVITMKSLYKANIPTMPVEIVDDDDVRFFIQENA 153 (700)
Q Consensus 85 ~Y~G~~~kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l~~k~~~~~~~~~~pi~I~dD~Dv~~ml~~~~ 153 (700)
.|++ .=.|.||..++|.+|.++|+++|++-+... .++|+=.+... ..++ +|.|+...+....
T Consensus 8 ~f~~--tIaIrvp~~~~y~~L~~ki~~kLkl~~e~i--~LsYkde~s~~--~v~l-~d~dle~aws~~~ 69 (80)
T cd06406 8 HFKY--TVAIQVARGLSYATLLQKISSKLELPAEHI--TLSYKSEASGE--DVIL-SDTNMEDVWSQAK 69 (80)
T ss_pred EEEE--EEEEEcCCCCCHHHHHHHHHHHhCCCchhc--EEEeccCCCCC--ccCc-ChHHHHHHHHhhc
Confidence 4665 679999999999999999999999977665 44443444333 3455 8999999998554
No 157
>PF03101 FAR1: FAR1 DNA-binding domain; InterPro: IPR004330 Phytochrome A is the primary photoreceptor for mediating various far-red light-induced responses in higher plants. It has been found that the proteins governing this response, which include FAR-RED ELONGATED HYPOCOTYL3 (FHY3) and FAR-RED-IMPAIRED RESPONSE1 (FAR1), are a pair of homologous proteins sharing significant sequence homology to mutator-like transposases. These proteins appear to be novel transcription factors, which are essential for activating the expression of FHY1 and FHL (for FHY1-like) and related genes, whose products are required for light-induced phytochrome A nuclear accumulation and subsequent light responses in plants. The FRS (FAR1 Related Sequences) family of proteins share a similar domain structure to mutator-like transposases, including an N-terminal C2H2 zinc finger domain, a central putative core transposase domain, and a C-terminal SWIM motif (named after SWI2/SNF and MuDR transposases). It seems plausible that the FRS family represent transcription factors derived from mutator-like transposases [, ]. This entry represents a domain found in FAR1 and FRS proteins. It contains a WRKY like fold and is therefore most likely a zinc binding DNA-binding domain.
Probab=95.30 E-value=0.059 Score=47.14 Aligned_cols=58 Identities=26% Similarity=0.415 Sum_probs=50.7
Q ss_pred HHHHhhhccceEEEeeecCc-------EEEEEec----------------------CCCCccEEEEEeeCCCCeEEEEEe
Q 040989 305 LKLGAAKKNFAFKVSKSTKD-------RFEVVCA----------------------DTNCKWRLRATKTAEDEYFEIRRF 355 (700)
Q Consensus 305 l~~~aI~~~f~~~~~kS~~~-------r~~~~C~----------------------~~gC~Wri~A~~~~~~~~f~I~~~ 355 (700)
.+.||....|.++..+|.+. ++...|. ..||+++|.+...+ .+.|.|..+
T Consensus 3 y~~yA~~~GF~vr~~~s~~~~~~~~~~~~~~~C~r~G~~~~~~~~~~~~~r~~~s~ktgC~a~i~v~~~~-~~~w~v~~~ 81 (91)
T PF03101_consen 3 YNSYARRHGFSVRKSSSRKSKKNGEIKRVTFVCSRGGKYKSKKKNEEKRRRNRPSKKTGCKARINVKRRK-DGKWRVTSF 81 (91)
T ss_pred HHHhcCcCCeEEEEeeeEeCCCCceEEEEEEEECCcccccccccccccccccccccccCCCEEEEEEEcc-CCEEEEEEC
Confidence 46799999999999998876 7888892 25899999999988 999999999
Q ss_pred cCCccccC
Q 040989 356 SNIHICTQ 363 (700)
Q Consensus 356 ~~~HtC~~ 363 (700)
..+|+..+
T Consensus 82 ~~~HNH~L 89 (91)
T PF03101_consen 82 VLEHNHPL 89 (91)
T ss_pred cCCcCCCC
Confidence 99999876
No 158
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=94.88 E-value=0.34 Score=51.93 Aligned_cols=102 Identities=18% Similarity=0.230 Sum_probs=59.8
Q ss_pred CCeEEEEeecCC-----CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCC----cEEEEEcCCC---C
Q 040989 417 NGTDVIWQIPDS-----PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRG----FAIITISSAG---R 484 (700)
Q Consensus 417 ~G~~l~~~~P~~-----pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~G----yaV~avd~~g---~ 484 (700)
+.++.++++|.+ +.||++++||- +||+. ..+|. +...|...| -.++.+++.+ |
T Consensus 80 ~~~~~vv~lppgy~~~~k~pvl~~~DG~-----~~~~~-------g~i~~---~~dsli~~g~i~pai~vgid~~d~~~R 144 (299)
T COG2382 80 SERRRVVYLPPGYNPLEKYPVLYLQDGQ-----DWFRS-------GRIPR---ILDSLIAAGEIPPAILVGIDYIDVKKR 144 (299)
T ss_pred cceeEEEEeCCCCCccccccEEEEeccH-----HHHhc-------CChHH---HHHHHHHcCCCCCceEEecCCCCHHHH
Confidence 445667777652 47999999953 24432 12332 344555554 4566777754 1
Q ss_pred cCCCcccH----HHHHHHHHHHHHHcCC--CCCCEEEEecChhHHHHHHHhhccC
Q 040989 485 CWTLGEER----LVVREIIRWWVERHKL--EKLPLVALGASSGGYFVSALAKGLR 533 (700)
Q Consensus 485 ~w~~~~e~----~~v~a~l~~~~~~~~l--~~~pl~l~G~S~GG~~a~~la~~~~ 533 (700)
.-.+..-. .-...++=++.+++.. .+...+|.|.|+||..++..|..+|
T Consensus 145 ~~~~~~n~~~~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~P 199 (299)
T COG2382 145 REELHCNEAYWRFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHP 199 (299)
T ss_pred HHHhcccHHHHHHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCc
Confidence 11111111 2223334455566533 3455799999999999999999986
No 159
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=94.63 E-value=0.1 Score=55.04 Aligned_cols=168 Identities=16% Similarity=0.163 Sum_probs=84.8
Q ss_pred eEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHH-HCCcE----EEEEcCCC-----CcCC-------------
Q 040989 431 AVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHAL-SRGFA----IITISSAG-----RCWT------------- 487 (700)
Q Consensus 431 ~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~-~~Gya----V~avd~~g-----~~w~------------- 487 (700)
--.||+||++++...| -.++.+|. +.|.+ ++-++.-| +.|.
T Consensus 12 tPTifihG~~gt~~s~----------------~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~ 75 (255)
T PF06028_consen 12 TPTIFIHGYGGTANSF----------------NHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFE 75 (255)
T ss_dssp EEEEEE--TTGGCCCC----------------HHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEES
T ss_pred CcEEEECCCCCChhHH----------------HHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEec
Confidence 4568899999997554 23678786 77765 44455544 1221
Q ss_pred Cc------ccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC----cCeEE-EEEecCCCCCCCCCCCCC
Q 040989 488 LG------EERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR----FSSIA-LMIAEGLFDQMDIPEDYP 556 (700)
Q Consensus 488 ~~------~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~----~~glv-~~I~~G~~~~~~~~~~yP 556 (700)
.. .+..-+.+++.++.+++++. .+-+.||||||..+..+...+. +.-+- .+...|+|.... ...++
T Consensus 76 ~n~~~~~~~qa~wl~~vl~~L~~~Y~~~--~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~-~~~~~ 152 (255)
T PF06028_consen 76 DNRNANYKKQAKWLKKVLKYLKKKYHFK--KFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGIL-GMNDD 152 (255)
T ss_dssp STT-CHHHHHHHHHHHHHHHHHHCC--S--EEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTT-CCSC-
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHhcCCC--EEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccc-ccccc
Confidence 11 23466788999999998755 6899999999999998877641 21221 123456665542 11122
Q ss_pred CeEEEccCCChhHHHHHHHHHHHH-Hh---CCCeeeEEEecCCcCCccccccCCCCCCHHHHHHHHHHHH
Q 040989 557 PTLFVHMPKDSYRQRKIGEFLVVL-RN---KGIDVAEIECMEFPLSRNFFTDRIPGLEQANSTKLFELFQ 622 (700)
Q Consensus 557 P~lf~hm~~D~~~~~~i~~~~~~L-~~---~gvp~~~i~~~~~~v~p~~f~~rdp~I~~~~S~~l~~al~ 622 (700)
+.........|......-+.+..+ |. ..+.+.-|-..- ..-+..|-.|+..-|.+|-.-++
T Consensus 153 ~~~~~~~~~gp~~~~~~y~~l~~~~~~~~p~~i~VLnI~G~~-----~~g~~sDG~V~~~Ss~sl~~L~~ 217 (255)
T PF06028_consen 153 QNQNDLNKNGPKSMTPMYQDLLKNRRKNFPKNIQVLNIYGDL-----EDGSNSDGIVPNASSLSLRYLLK 217 (255)
T ss_dssp TTTT-CSTT-BSS--HHHHHHHHTHGGGSTTT-EEEEEEEES-----BTTCSBTSSSBHHHHCTHHHHCT
T ss_pred chhhhhcccCCcccCHHHHHHHHHHHhhCCCCeEEEEEeccc-----CCCCCCCeEEeHHHHHHHHHHhh
Confidence 211111111111111111122222 11 244455554420 01134677899998888877775
No 160
>COG0627 Predicted esterase [General function prediction only]
Probab=94.60 E-value=0.066 Score=58.21 Aligned_cols=93 Identities=22% Similarity=0.234 Sum_probs=60.9
Q ss_pred CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcC--------------CCCcCCCc----
Q 040989 428 SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISS--------------AGRCWTLG---- 489 (700)
Q Consensus 428 ~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~--------------~g~~w~~~---- 489 (700)
.+.+|++++||...+...++.. .| +-+.+...|++++.+|- .|..-+|.
T Consensus 52 ~~ipV~~~l~G~t~~~~~~~~~-------~g------~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~ 118 (316)
T COG0627 52 RDIPVLYLLSGLTCNEPNVYLL-------DG------LRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWT 118 (316)
T ss_pred CCCCEEEEeCCCCCCCCceEec-------cc------hhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccc
Confidence 4579999999998886556543 22 34668889999999732 12212211
Q ss_pred --------ccH--HHHHHHHHHHHHHcCCCCC--CEEEEecChhHHHHHHHhhccC
Q 040989 490 --------EER--LVVREIIRWWVERHKLEKL--PLVALGASSGGYFVSALAKGLR 533 (700)
Q Consensus 490 --------~e~--~~v~a~l~~~~~~~~l~~~--pl~l~G~S~GG~~a~~la~~~~ 533 (700)
-.. -.+..+-..|.+.+..... ...++|+||||+-|+.+|+++|
T Consensus 119 ~~~~~~~~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~p 174 (316)
T COG0627 119 QPPWASGPYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHP 174 (316)
T ss_pred cCccccCccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCc
Confidence 111 1223333455566655543 7899999999999999999974
No 161
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=94.51 E-value=0.048 Score=62.32 Aligned_cols=98 Identities=19% Similarity=0.208 Sum_probs=67.1
Q ss_pred EEeecCCC-ceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCC-CcCCCcccHHHHHHHH
Q 040989 422 IWQIPDSP-KAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAG-RCWTLGEERLVVREII 499 (700)
Q Consensus 422 ~~~~P~~p-r~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g-~~w~~~~e~~~v~a~l 499 (700)
.|.-|++| +-+||-+||+|--+..- + .+|..+...+.+.|-.|+.+||-- ----|+.-.+.+--+.
T Consensus 387 ~wh~P~p~S~sli~HcHGGGfVAqsS--k----------SHE~YLr~Wa~aL~cPiiSVdYSLAPEaPFPRaleEv~fAY 454 (880)
T KOG4388|consen 387 LWHRPAPRSRSLIVHCHGGGFVAQSS--K----------SHEPYLRSWAQALGCPIISVDYSLAPEAPFPRALEEVFFAY 454 (880)
T ss_pred cCCCCCCCCceEEEEecCCceeeecc--c----------cccHHHHHHHHHhCCCeEEeeeccCCCCCCCcHHHHHHHHH
Confidence 46666544 78999999998665332 2 234668889999999999999842 1112233334444444
Q ss_pred HHHHHH---cCCCCCCEEEEecChhHHHHHHHhhc
Q 040989 500 RWWVER---HKLEKLPLVALGASSGGYFVSALAKG 531 (700)
Q Consensus 500 ~~~~~~---~~l~~~pl~l~G~S~GG~~a~~la~~ 531 (700)
-|+++. .|..+.+|++.|-|+||.+..-+|++
T Consensus 455 cW~inn~allG~TgEriv~aGDSAGgNL~~~VaLr 489 (880)
T KOG4388|consen 455 CWAINNCALLGSTGERIVLAGDSAGGNLCFTVALR 489 (880)
T ss_pred HHHhcCHHHhCcccceEEEeccCCCcceeehhHHH
Confidence 455533 48899999999999999887766665
No 162
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=94.50 E-value=0.051 Score=50.73 Aligned_cols=38 Identities=26% Similarity=0.305 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhcc
Q 040989 493 LVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGL 532 (700)
Q Consensus 493 ~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~ 532 (700)
..+.+.++.+.++++ ...+++.|||+||++|..+|..+
T Consensus 48 ~~~~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 48 DQILDALKELVEKYP--DYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccc--CccchhhccchHHHHHHHHHHhh
Confidence 345556666777774 58999999999999999999874
No 163
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=94.39 E-value=0.3 Score=52.67 Aligned_cols=91 Identities=11% Similarity=0.138 Sum_probs=57.8
Q ss_pred CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCC--CcCCC---cccHHHHHHHHHHHH
Q 040989 429 PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAG--RCWTL---GEERLVVREIIRWWV 503 (700)
Q Consensus 429 pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g--~~w~~---~~e~~~v~a~l~~~~ 503 (700)
++-+|||+-|.+..-.. .+| -..+++.|.+.||+|+-+-.+. .+|+. ..|++++.++|++++
T Consensus 32 ~~~~llfIGGLtDGl~t-vpY------------~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL~~D~~eI~~~v~ylr 98 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLT-VPY------------LPDLAEALEETGWSLFQVQLSSSYSGWGTSSLDRDVEEIAQLVEYLR 98 (303)
T ss_dssp SSSEEEEE--TT--TT--STC------------HHHHHHHHT-TT-EEEEE--GGGBTTS-S--HHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCCCC-Cch------------HHHHHHHhccCCeEEEEEEecCccCCcCcchhhhHHHHHHHHHHHHH
Confidence 45678888887665321 122 2346777777899999987543 56654 578899999999999
Q ss_pred HHcCC--CCCCEEEEecChhHHHHHHHhhcc
Q 040989 504 ERHKL--EKLPLVALGASSGGYFVSALAKGL 532 (700)
Q Consensus 504 ~~~~l--~~~pl~l~G~S~GG~~a~~la~~~ 532 (700)
...+- ....|+|+|||=|.=-++.+..+.
T Consensus 99 ~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~ 129 (303)
T PF08538_consen 99 SEKGGHFGREKIVLMGHSTGCQDVLHYLSSP 129 (303)
T ss_dssp HHS------S-EEEEEECCHHHHHHHHHHH-
T ss_pred HhhccccCCccEEEEecCCCcHHHHHHHhcc
Confidence 88532 467999999999999999998764
No 164
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=94.30 E-value=0.49 Score=52.82 Aligned_cols=40 Identities=23% Similarity=0.228 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHcCC-C-CCCEEEEecChhHHHHHHHhhccC
Q 040989 494 VVREIIRWWVERHKL-E-KLPLVALGASSGGYFVSALAKGLR 533 (700)
Q Consensus 494 ~v~a~l~~~~~~~~l-~-~~pl~l~G~S~GG~~a~~la~~~~ 533 (700)
|.-.++.++..+++. . ++|+++.|.|-||++|.+.|.--|
T Consensus 165 D~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP 206 (403)
T PF11144_consen 165 DIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAP 206 (403)
T ss_pred HHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCc
Confidence 444455556666533 2 479999999999999998887655
No 165
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=93.99 E-value=0.54 Score=54.40 Aligned_cols=160 Identities=15% Similarity=0.201 Sum_probs=86.1
Q ss_pred CCCCCCEEEEecChhHHHHHHHhhccC---cCeEEEEEecCC-CCCCCC---------CCCCCCeEEEccCCChhHHHHH
Q 040989 507 KLEKLPLVALGASSGGYFVSALAKGLR---FSSIALMIAEGL-FDQMDI---------PEDYPPTLFVHMPKDSYRQRKI 573 (700)
Q Consensus 507 ~l~~~pl~l~G~S~GG~~a~~la~~~~---~~glv~~I~~G~-~~~~~~---------~~~yPP~lf~hm~~D~~~~~~i 573 (700)
.+...||+|.|.|||..++..++..-. +++ .||-|+ ++..+- ..---|+|||.+.+|..-.
T Consensus 246 efpha~IiLvGrsmGAlVachVSpsnsdv~V~~---vVCigypl~~vdgprgirDE~Lldmk~PVLFV~Gsnd~mcs--- 319 (784)
T KOG3253|consen 246 EFPHAPIILVGRSMGALVACHVSPSNSDVEVDA---VVCIGYPLDTVDGPRGIRDEALLDMKQPVLFVIGSNDHMCS--- 319 (784)
T ss_pred cCCCCceEEEecccCceeeEEeccccCCceEEE---EEEecccccCCCcccCCcchhhHhcCCceEEEecCCcccCC---
Confidence 347899999999999655555544322 333 456554 222221 1112399999999987631
Q ss_pred HHHHHHHHhC-CCeeeEEEecC----CcCCccccccCCCCC-CHHHHHHHHHHHHHcccccC---CCCcccCCchhHHHH
Q 040989 574 GEFLVVLRNK-GIDVAEIECME----FPLSRNFFTDRIPGL-EQANSTKLFELFQEKGFIDE---NGYMRSDGRRTRWKE 644 (700)
Q Consensus 574 ~~~~~~L~~~-gvp~~~i~~~~----~~v~p~~f~~rdp~I-~~~~S~~l~~al~~~g~ld~---~g~l~~d~r~~~w~~ 644 (700)
.+.++.++.+ ..++++++++. ..|.-. -.+..++ -.+.-..+.++++++--++- .|.|.. ..+.
T Consensus 320 pn~ME~vreKMqA~~elhVI~~adhsmaipk~--k~esegltqseVd~~i~~aI~efvt~~l~c~eghM~~-----~~~~ 392 (784)
T KOG3253|consen 320 PNSMEEVREKMQAEVELHVIGGADHSMAIPKR--KVESEGLTQSEVDSAIAQAIKEFVTIALNCTEGHMLA-----SYLS 392 (784)
T ss_pred HHHHHHHHHHhhccceEEEecCCCccccCCcc--ccccccccHHHHHHHHHHHHHHHHHHhhcCCCCcccc-----chhH
Confidence 1233333222 55666777653 001000 0122222 23445566677776544443 454433 2333
Q ss_pred HHHhhcccccccchhhHHHHHHHHHHHhhhhcccChhhhhhh
Q 040989 645 ALRESNAIFLNKNLVHHVQEELNLAFAYHEMTSLPSEQIFKW 686 (700)
Q Consensus 645 ~l~~~~~~~~~~~~~~~i~eeln~A~a~He~~s~~~~~~l~w 686 (700)
.+++.+.+. ++.-+-|++|+.-++.+..+..-+|+
T Consensus 393 q~~~~k~~p-------~~la~~~~~f~v~q~~~r~~~~~~d~ 427 (784)
T KOG3253|consen 393 QLKRLKSLP-------MKLAEWVFCFKVIQKSERSNFKKIDF 427 (784)
T ss_pred HHhhhhccc-------hHHhhhhHHHhhhhhcccccCcccCc
Confidence 333333222 44446688999999888888877765
No 166
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=93.77 E-value=0.092 Score=50.26 Aligned_cols=38 Identities=18% Similarity=0.249 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC
Q 040989 494 VVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR 533 (700)
Q Consensus 494 ~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~ 533 (700)
.+...++....++ +...+++.|||+||++|..+|..++
T Consensus 13 ~i~~~~~~~~~~~--p~~~i~v~GHSlGg~lA~l~a~~~~ 50 (153)
T cd00741 13 LVLPLLKSALAQY--PDYKIHVTGHSLGGALAGLAGLDLR 50 (153)
T ss_pred HHHHHHHHHHHHC--CCCeEEEEEcCHHHHHHHHHHHHHH
Confidence 3444444544444 5789999999999999999998764
No 167
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=93.59 E-value=0.62 Score=48.75 Aligned_cols=177 Identities=18% Similarity=0.325 Sum_probs=91.2
Q ss_pred eccCCeEE-EEee-cCC--C--ceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCC---
Q 040989 414 ELRNGTDV-IWQI-PDS--P--KAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGR--- 484 (700)
Q Consensus 414 ~~~~G~~l-~~~~-P~~--p--r~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~--- 484 (700)
..-+|+++ .|.- |.. | .++|+++-|.+....+| ..++..+...||.|+.+|+..|
T Consensus 8 ~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~----------------agLA~YL~~NGFhViRyDsl~HvGl 71 (294)
T PF02273_consen 8 RLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHF----------------AGLAEYLSANGFHVIRYDSLNHVGL 71 (294)
T ss_dssp EETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGG----------------HHHHHHHHTTT--EEEE---B----
T ss_pred EcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHH----------------HHHHHHHhhCCeEEEeccccccccC
Confidence 34567777 6765 542 3 48999999999886554 4578899999999999998642
Q ss_pred c------CCCcccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccCcCeEEEEEecCCCCC---------C
Q 040989 485 C------WTLGEERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLRFSSIALMIAEGLFDQ---------M 549 (700)
Q Consensus 485 ~------w~~~~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~~~glv~~I~~G~~~~---------~ 549 (700)
+ +.+..-..++..+++|+. ++|. ..+-|+-.|+-|=+|...|....++=++.++ |..+- .
T Consensus 72 SsG~I~eftms~g~~sL~~V~dwl~-~~g~--~~~GLIAaSLSaRIAy~Va~~i~lsfLitaV--GVVnlr~TLe~al~~ 146 (294)
T PF02273_consen 72 SSGDINEFTMSIGKASLLTVIDWLA-TRGI--RRIGLIAASLSARIAYEVAADINLSFLITAV--GVVNLRDTLEKALGY 146 (294)
T ss_dssp ---------HHHHHHHHHHHHHHHH-HTT-----EEEEEETTHHHHHHHHTTTS--SEEEEES----S-HHHHHHHHHSS
T ss_pred CCCChhhcchHHhHHHHHHHHHHHH-hcCC--CcchhhhhhhhHHHHHHHhhccCcceEEEEe--eeeeHHHHHHHHhcc
Confidence 1 112222367788888888 5553 4588888999999999999986544444322 33221 0
Q ss_pred C----CCCCCCCeEEEccC--------CChhH--HHHHHHHHHHHHhCCCeeeEEEecCCcCCccccccCCCCCCHHHHH
Q 040989 550 D----IPEDYPPTLFVHMP--------KDSYR--QRKIGEFLVVLRNKGIDVAEIECMEFPLSRNFFTDRIPGLEQANST 615 (700)
Q Consensus 550 ~----~~~~yPP~lf~hm~--------~D~~~--~~~i~~~~~~L~~~gvp~~~i~~~~~~v~p~~f~~rdp~I~~~~S~ 615 (700)
| .....|-.+=+.+- +|.+. ..-..-.++.+++..+|.--++. .+|.-|....-.
T Consensus 147 Dyl~~~i~~lp~dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A-----------~~D~WV~q~eV~ 215 (294)
T PF02273_consen 147 DYLQLPIEQLPEDLDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTA-----------NDDDWVKQSEVE 215 (294)
T ss_dssp -GGGS-GGG--SEEEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEE-----------TT-TTS-HHHHH
T ss_pred chhhcchhhCCCcccccccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEe-----------CCCccccHHHHH
Confidence 1 12233333322221 12211 01222345667777888766655 677788877777
Q ss_pred HHHHHHH
Q 040989 616 KLFELFQ 622 (700)
Q Consensus 616 ~l~~al~ 622 (700)
.+...+.
T Consensus 216 ~~~~~~~ 222 (294)
T PF02273_consen 216 ELLDNIN 222 (294)
T ss_dssp HHHTT-T
T ss_pred HHHHhcC
Confidence 7666554
No 168
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=93.56 E-value=0.094 Score=53.70 Aligned_cols=38 Identities=24% Similarity=0.238 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhcc
Q 040989 493 LVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGL 532 (700)
Q Consensus 493 ~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~ 532 (700)
..+...+....+++ ++.++++.|||+||++|..+|..+
T Consensus 112 ~~~~~~~~~~~~~~--p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 112 NQVLPELKSALKQY--PDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred HHHHHHHHHHHhhC--CCceEEEEccCHHHHHHHHHHHHH
Confidence 34444555555554 688999999999999999998864
No 169
>cd06408 PB1_NoxR The PB1 domain is present in the Epichloe festucae NoxR protein (NADPH oxidase regulator), a key regulator of NADPH oxidase isoform, NoxA. NoxA is essential for growth control of the fungal endophyte in plant tissue in the process of symbiotic interaction between a fungi and its plant host. The Epichloe festucae p67(phox)-like regulator, NoxR, dispensable in culture but essential in plants for the symbiotic interaction. Plants infected with a noxR deletion mutant show severe stunting and premature senescence, whereas hyphae in the meristematic tissues show increased branching leading to increased fungal colonization of pseudostem and leaf blade tissue. The PB1 domain is a modular domain mediating specific protein-protein interactions which a play role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is
Probab=93.53 E-value=0.16 Score=44.66 Aligned_cols=59 Identities=15% Similarity=0.236 Sum_probs=47.4
Q ss_pred EeCCeeceeecCCCCCHHHHHHHHHhhcccCCceeEEEEEEEEeCCCCCceeeeecchhHHHHHhhc
Q 040989 86 YSGGQTKGIIVSDDITYKELVDRLYGIVKVDTNEYVITMKSLYKANIPTMPVEIVDDDDVRFFIQEN 152 (700)
Q Consensus 86 Y~G~~~kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l~~k~~~~~~~~~~pi~I~dD~Dv~~ml~~~ 152 (700)
| +++...|.||..++|++|.++|.++|++.. .|.|+|+=. =.+++|+++.||..=|...
T Consensus 9 ~-~~Dv~~i~v~~~i~f~dL~~kIrdkf~~~~---~~~iKykDE----GD~iti~sq~DLd~Ai~~a 67 (86)
T cd06408 9 A-QDDTRYIMIGPDTGFADFEDKIRDKFGFKR---RLKIKMKDD----GDMITMGDQDDLDMAIDTA 67 (86)
T ss_pred e-cCcEEEEEcCCCCCHHHHHHHHHHHhCCCC---ceEEEEEcC----CCCccccCHHHHHHHHHHH
Confidence 5 456789999999999999999999999963 445554332 4789999999999888744
No 170
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=93.44 E-value=0.12 Score=52.93 Aligned_cols=38 Identities=21% Similarity=0.343 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhc
Q 040989 493 LVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKG 531 (700)
Q Consensus 493 ~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~ 531 (700)
.||+++.+++.+++. .+.|++|.|||+|+.+..+|-..
T Consensus 78 ~DV~~AF~~yL~~~n-~GRPfILaGHSQGs~~l~~LL~e 115 (207)
T PF11288_consen 78 SDVRAAFDYYLANYN-NGRPFILAGHSQGSMHLLRLLKE 115 (207)
T ss_pred HHHHHHHHHHHHhcC-CCCCEEEEEeChHHHHHHHHHHH
Confidence 789999998888775 67899999999999999999765
No 171
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=93.35 E-value=0.27 Score=56.89 Aligned_cols=105 Identities=16% Similarity=0.057 Sum_probs=68.4
Q ss_pred cCCeEEEEeecCCC----ceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCC---
Q 040989 416 RNGTDVIWQIPDSP----KAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTL--- 488 (700)
Q Consensus 416 ~~G~~l~~~~P~~p----r~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~--- 488 (700)
-|-..+-.+.|... .||+|++||++-..+.... .+.. .....+..+..-|+.+.+|=..+++
T Consensus 94 EDCLylNV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~------~~~~-----~~~~~~~~~~VVvVt~~YRLG~lGF~st 162 (545)
T KOG1516|consen 94 EDCLYLNVYTPQGCSESKLPVMVYIHGGGFQFGSASS------FEII-----SPAYVLLLKDVVVVTINYRLGPLGFLST 162 (545)
T ss_pred CCCceEEEeccCCCccCCCCEEEEEeCCceeeccccc------hhhc-----CchhccccCCEEEEEecccceeceeeec
Confidence 44445545557633 5999999999654322100 0111 1233455667888888887432221
Q ss_pred c-------ccHHHHHHHHHHHHH---HcCCCCCCEEEEecChhHHHHHHHhhc
Q 040989 489 G-------EERLVVREIIRWWVE---RHKLEKLPLVALGASSGGYFVSALAKG 531 (700)
Q Consensus 489 ~-------~e~~~v~a~l~~~~~---~~~l~~~pl~l~G~S~GG~~a~~la~~ 531 (700)
+ --..|...+++|+.+ .+|-++.++-++|+|+||+.+..|...
T Consensus 163 ~d~~~~gN~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~S 215 (545)
T KOG1516|consen 163 GDSAAPGNLGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLS 215 (545)
T ss_pred CCCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcC
Confidence 1 113578888888864 468899999999999999999998875
No 172
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=93.15 E-value=0.3 Score=50.70 Aligned_cols=87 Identities=18% Similarity=0.116 Sum_probs=52.4
Q ss_pred CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCc--EEEEEcCCCCcC--CCccc---H----HHHH
Q 040989 428 SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGF--AIITISSAGRCW--TLGEE---R----LVVR 496 (700)
Q Consensus 428 ~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~Gy--aV~avd~~g~~w--~~~~e---~----~~v~ 496 (700)
+.+-++||+||+.-+-.+-. ...++.....|| .++.++.+.... .+..+ + ..+.
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~---------------~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~ 80 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDAL---------------RRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALA 80 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHH---------------HHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHH
Confidence 45789999999988732211 123334444445 677787654322 11111 1 3344
Q ss_pred HHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhc
Q 040989 497 EIIRWWVERHKLEKLPLVALGASSGGYFVSALAKG 531 (700)
Q Consensus 497 a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~ 531 (700)
.+|+.+.+.. ....|.+++||||+.+++..-..
T Consensus 81 ~~L~~L~~~~--~~~~I~ilaHSMG~rv~~~aL~~ 113 (233)
T PF05990_consen 81 RFLRDLARAP--GIKRIHILAHSMGNRVLLEALRQ 113 (233)
T ss_pred HHHHHHHhcc--CCceEEEEEeCchHHHHHHHHHH
Confidence 4444444442 47899999999999999876554
No 173
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=93.02 E-value=0.15 Score=53.97 Aligned_cols=44 Identities=18% Similarity=0.123 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccCcCeEE
Q 040989 493 LVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLRFSSIA 538 (700)
Q Consensus 493 ~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~~~glv 538 (700)
.++.+++..+++.+ ++.++.|.|||+||++|++|+.++.+..+.
T Consensus 260 Sa~ldI~~~v~~~Y--pda~iwlTGHSLGGa~AsLlG~~fglP~Va 303 (425)
T KOG4540|consen 260 SAALDILGAVRRIY--PDARIWLTGHSLGGAIASLLGIRFGLPVVA 303 (425)
T ss_pred HHHHHHHHHHHHhC--CCceEEEeccccchHHHHHhccccCCceEE
Confidence 45566666777777 688999999999999999999998765543
No 174
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=93.02 E-value=0.15 Score=53.97 Aligned_cols=44 Identities=18% Similarity=0.123 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccCcCeEE
Q 040989 493 LVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLRFSSIA 538 (700)
Q Consensus 493 ~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~~~glv 538 (700)
.++.+++..+++.+ ++.++.|.|||+||++|++|+.++.+..+.
T Consensus 260 Sa~ldI~~~v~~~Y--pda~iwlTGHSLGGa~AsLlG~~fglP~Va 303 (425)
T COG5153 260 SAALDILGAVRRIY--PDARIWLTGHSLGGAIASLLGIRFGLPVVA 303 (425)
T ss_pred HHHHHHHHHHHHhC--CCceEEEeccccchHHHHHhccccCCceEE
Confidence 45566666777777 688999999999999999999998765543
No 175
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=92.99 E-value=0.2 Score=63.77 Aligned_cols=85 Identities=25% Similarity=0.202 Sum_probs=55.3
Q ss_pred ceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCC--cccHHHHHHHHHHHHHHcC
Q 040989 430 KAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTL--GEERLVVREIIRWWVERHK 507 (700)
Q Consensus 430 r~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~--~~e~~~v~a~l~~~~~~~~ 507 (700)
.+.|+++||.++.+..|. .++ ..+..++.|++++.+|+.... .....++.+-+.....+..
T Consensus 1068 ~~~l~~lh~~~g~~~~~~----------------~l~-~~l~~~~~v~~~~~~g~~~~~~~~~~l~~la~~~~~~i~~~~ 1130 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFS----------------VLS-RYLDPQWSIYGIQSPRPDGPMQTATSLDEVCEAHLATLLEQQ 1130 (1296)
T ss_pred CCCeEEecCCCCchHHHH----------------HHH-HhcCCCCcEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHhhC
Confidence 346899999998864331 133 355678999999998764331 1223333333333333322
Q ss_pred CCCCCEEEEecChhHHHHHHHhhcc
Q 040989 508 LEKLPLVALGASSGGYFVSALAKGL 532 (700)
Q Consensus 508 l~~~pl~l~G~S~GG~~a~~la~~~ 532 (700)
...|..++|+|+||.+|..+|.++
T Consensus 1131 -~~~p~~l~G~S~Gg~vA~e~A~~l 1154 (1296)
T PRK10252 1131 -PHGPYHLLGYSLGGTLAQGIAARL 1154 (1296)
T ss_pred -CCCCEEEEEechhhHHHHHHHHHH
Confidence 345999999999999999999864
No 176
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=92.84 E-value=0.19 Score=51.41 Aligned_cols=20 Identities=20% Similarity=0.215 Sum_probs=16.2
Q ss_pred CCCEEEEecChhHHHHHHHh
Q 040989 510 KLPLVALGASSGGYFVSALA 529 (700)
Q Consensus 510 ~~pl~l~G~S~GG~~a~~la 529 (700)
..|+.+.||||||-++-.+.
T Consensus 77 ~~~IsfIgHSLGGli~r~al 96 (217)
T PF05057_consen 77 IRKISFIGHSLGGLIARYAL 96 (217)
T ss_pred cccceEEEecccHHHHHHHH
Confidence 35899999999999885443
No 177
>cd06407 PB1_NLP A PB1 domain is present in NIN like proteins (NLP), a key enzyme in a process of establishment of symbiosis betweeen legumes and nitrogen fixing bacteria (Rhizobium). The PB1 domain is a modular domain mediating specific protein-protein interaction which play a role in many critical cell processes like osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-inte
Probab=92.77 E-value=0.39 Score=41.94 Aligned_cols=63 Identities=17% Similarity=0.183 Sum_probs=50.6
Q ss_pred CCeeceeecCCCCCHHHHHHHHHhhcccCC-ceeEEEEEEEEeCCCCCceeeeecchhHHHHHhhccCC
Q 040989 88 GGQTKGIIVSDDITYKELVDRLYGIVKVDT-NEYVITMKSLYKANIPTMPVEIVDDDDVRFFIQENAAH 155 (700)
Q Consensus 88 G~~~kgI~V~~~~ty~~l~~~l~~~l~ID~-~~~~l~~k~~~~~~~~~~pi~I~dD~Dv~~ml~~~~~~ 155 (700)
|++..-+.++..++|.+|.++|.++|+++. +.+ .+||.=. .-.++.|++|.||..=+.+...+
T Consensus 8 ~~d~~r~~l~~~~~~~~L~~~i~~r~~~~~~~~f--~LkY~Dd---egd~v~ltsd~DL~eai~i~~~~ 71 (82)
T cd06407 8 GEEKIRFRLPPSWGFTELKQEIAKRFKLDDMSAF--DLKYLDD---DEEWVLLTCDADLEECIDVYRSS 71 (82)
T ss_pred CCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCee--EEEEECC---CCCeEEeecHHHHHHHHHHHHHC
Confidence 567788899999999999999999999986 444 6675332 46788999999999988766544
No 178
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=92.66 E-value=0.4 Score=52.63 Aligned_cols=88 Identities=20% Similarity=0.276 Sum_probs=59.4
Q ss_pred CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEE--EcC--CCCc--CCCccc-----HHHHHH
Q 040989 429 PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIIT--ISS--AGRC--WTLGEE-----RLVVRE 497 (700)
Q Consensus 429 pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~a--vd~--~g~~--w~~~~e-----~~~v~a 497 (700)
.+-+++|+||.+-+ |-+. + ...++.....|+-... ++. +|.- +..+.| .++++.
T Consensus 115 ~k~vlvFvHGfNnt---f~da----------v--~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~ 179 (377)
T COG4782 115 AKTVLVFVHGFNNT---FEDA----------V--YRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALER 179 (377)
T ss_pred CCeEEEEEcccCCc---hhHH----------H--HHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHH
Confidence 36799999999877 4332 1 2356667777765444 443 3332 222222 367788
Q ss_pred HHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC
Q 040989 498 IIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR 533 (700)
Q Consensus 498 ~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~ 533 (700)
+|+.+.++. ....|+++.||||..++...-.++.
T Consensus 180 ~lr~La~~~--~~~~I~ilAHSMGtwl~~e~LrQLa 213 (377)
T COG4782 180 LLRYLATDK--PVKRIYLLAHSMGTWLLMEALRQLA 213 (377)
T ss_pred HHHHHHhCC--CCceEEEEEecchHHHHHHHHHHHh
Confidence 888888775 4678999999999999988877653
No 179
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=92.53 E-value=0.54 Score=52.05 Aligned_cols=113 Identities=16% Similarity=0.232 Sum_probs=59.1
Q ss_pred CeEE-EEeecC----CCceEEEEeccC-CCCCCcc-ccCCCCCCCC-CCCchHHHHHHHHHHCCcEEEEEcC-CCCcCCC
Q 040989 418 GTDV-IWQIPD----SPKAVLFLAHGC-NGRAVHF-WDRSPNCPNC-IGLPEERLLVLHALSRGFAIITISS-AGRCWTL 488 (700)
Q Consensus 418 G~~l-~~~~P~----~pr~vvv~lHG~-~~~~~~~-~~~s~~c~~c-~glpe~~~~~~~~~~~GyaV~avd~-~g~~w~~ 488 (700)
+..+ ||..++ ..+|+||++.|+ |.++... +....-|.-- .+ +..+.....---+-..++.+|+ .|.+++.
T Consensus 23 ~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~-~~~l~~n~~sW~~~an~l~iD~PvGtGfS~ 101 (415)
T PF00450_consen 23 NAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDG-PYTLEDNPYSWNKFANLLFIDQPVGTGFSY 101 (415)
T ss_dssp TEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTS-TSEEEE-TT-GGGTSEEEEE--STTSTT-E
T ss_pred CcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecc-cccccccccccccccceEEEeecCceEEee
Confidence 4455 555554 237999999999 5443211 1111111000 00 0000011122234478999995 4766653
Q ss_pred c-----------ccHHHHHHHHHHHHHHc-CCCCCCEEEEecChhHHHHHHHhhc
Q 040989 489 G-----------EERLVVREIIRWWVERH-KLEKLPLVALGASSGGYFVSALAKG 531 (700)
Q Consensus 489 ~-----------~e~~~v~a~l~~~~~~~-~l~~~pl~l~G~S~GG~~a~~la~~ 531 (700)
. ..+.++...|+.|..++ .+...|+|++|.|-||..+-.+|..
T Consensus 102 ~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~ 156 (415)
T PF00450_consen 102 GNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASY 156 (415)
T ss_dssp ESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHH
T ss_pred ccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHh
Confidence 1 22355666666666666 4567799999999999999888865
No 180
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.46 E-value=0.7 Score=47.30 Aligned_cols=97 Identities=18% Similarity=0.301 Sum_probs=66.8
Q ss_pred CCceEEEEeccCCCCCCccccCC------CCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCC-----------cc
Q 040989 428 SPKAVLFLAHGCNGRAVHFWDRS------PNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTL-----------GE 490 (700)
Q Consensus 428 ~pr~vvv~lHG~~~~~~~~~~~s------~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~-----------~~ 490 (700)
+|+-++|++||.|--...-|.+. ..| -+.+| .+++|.+.||.|+....- +|..+ .+
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~--GTQiP----yi~rAv~~Gygviv~N~N-~~~kfye~k~np~kyirt 171 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDS--GTQIP----YIKRAVAEGYGVIVLNPN-RERKFYEKKRNPQKYIRT 171 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhcccccc--CCcCh----HHHHHHHcCCcEEEeCCc-hhhhhhhcccCcchhccc
Confidence 57789999999976544455542 222 23445 789999999999998864 22211 13
Q ss_pred cHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC
Q 040989 491 ERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR 533 (700)
Q Consensus 491 e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~ 533 (700)
.+.-+.-++..++.. ....-+|++-||-||+.++.|-.+++
T Consensus 172 ~veh~~yvw~~~v~p--a~~~sv~vvahsyGG~~t~~l~~~f~ 212 (297)
T KOG3967|consen 172 PVEHAKYVWKNIVLP--AKAESVFVVAHSYGGSLTLDLVERFP 212 (297)
T ss_pred hHHHHHHHHHHHhcc--cCcceEEEEEeccCChhHHHHHHhcC
Confidence 344555555555543 35678999999999999999998875
No 181
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=92.41 E-value=0.66 Score=52.31 Aligned_cols=91 Identities=18% Similarity=0.286 Sum_probs=59.5
Q ss_pred eEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCC--CCcCCC-------------cccHHHH
Q 040989 431 AVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSA--GRCWTL-------------GEERLVV 495 (700)
Q Consensus 431 ~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~--g~~w~~-------------~~e~~~v 495 (700)
+-||++-|+.+....++.. .-.+...|.+.|=+|+++++| |.+.-+ ..-+.|+
T Consensus 29 gpifl~~ggE~~~~~~~~~------------~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~ 96 (434)
T PF05577_consen 29 GPIFLYIGGEGPIEPFWIN------------NGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADL 96 (434)
T ss_dssp SEEEEEE--SS-HHHHHHH-------------HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHH
T ss_pred CCEEEEECCCCccchhhhc------------CChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHH
Confidence 4455555777776655432 113567788999999999998 544422 1224788
Q ss_pred HHHHHHHHHHc-CCCCCCEEEEecChhHHHHHHHhhccC
Q 040989 496 REIIRWWVERH-KLEKLPLVALGASSGGYFVSALAKGLR 533 (700)
Q Consensus 496 ~a~l~~~~~~~-~l~~~pl~l~G~S~GG~~a~~la~~~~ 533 (700)
+..++++..++ ..+..|++++|-|-||++|+.+-.++|
T Consensus 97 a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP 135 (434)
T PF05577_consen 97 AYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYP 135 (434)
T ss_dssp HHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-T
T ss_pred HHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCC
Confidence 88888888776 346789999999999999999999987
No 182
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=92.35 E-value=0.27 Score=54.11 Aligned_cols=106 Identities=19% Similarity=0.298 Sum_probs=65.8
Q ss_pred ccCCeEEEEee---cCC-CceEEEEeccCCCC--CCc--------cccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEc
Q 040989 415 LRNGTDVIWQI---PDS-PKAVLFLAHGCNGR--AVH--------FWDRSPNCPNCIGLPEERLLVLHALSRGFAIITIS 480 (700)
Q Consensus 415 ~~~G~~l~~~~---P~~-pr~vvv~lHG~~~~--~~~--------~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd 480 (700)
.+.+.++.|+. +.. .--+|+++||..++ +.. ||+. +.|=- +.+.-..|=||+++
T Consensus 32 ~l~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~------liGpG------~~iDt~r~fvIc~N 99 (368)
T COG2021 32 VLSDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDD------LIGPG------KPIDTERFFVICTN 99 (368)
T ss_pred cccCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHH------hcCCC------CCCCccceEEEEec
Confidence 34445666664 322 23589999999773 333 4442 11110 12334569999999
Q ss_pred CCCCcCCC------c-------cc-----HHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC
Q 040989 481 SAGRCWTL------G-------EE-----RLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR 533 (700)
Q Consensus 481 ~~g~~w~~------~-------~e-----~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~ 533 (700)
..|.|.+. . .+ +.|...+-+.+.+++|+..+. -++|-||||.-|+..+..+|
T Consensus 100 vlG~c~GStgP~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~-avvGgSmGGMqaleWa~~yP 169 (368)
T COG2021 100 VLGGCKGSTGPSSINPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLA-AVVGGSMGGMQALEWAIRYP 169 (368)
T ss_pred CCCCCCCCCCCCCcCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEe-eeeccChHHHHHHHHHHhCh
Confidence 99988642 0 11 234444445677888876533 26788999999999999876
No 183
>PLN02454 triacylglycerol lipase
Probab=91.92 E-value=0.23 Score=55.72 Aligned_cols=40 Identities=30% Similarity=0.268 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhcc
Q 040989 493 LVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGL 532 (700)
Q Consensus 493 ~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~ 532 (700)
..+.+.|+.++++++-....|+++|||+||++|++.|..+
T Consensus 210 ~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di 249 (414)
T PLN02454 210 SQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDI 249 (414)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHH
Confidence 4556666777777753445699999999999999998764
No 184
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=91.65 E-value=0.3 Score=53.57 Aligned_cols=86 Identities=17% Similarity=0.184 Sum_probs=51.3
Q ss_pred ceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcE---EEEEcCCCC--cCCCcccHHHHHHHHHHHHH
Q 040989 430 KAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFA---IITISSAGR--CWTLGEERLVVREIIRWWVE 504 (700)
Q Consensus 430 r~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~Gya---V~avd~~g~--~w~~~~e~~~v~a~l~~~~~ 504 (700)
+=.++++||.+.....+.. +...+...||. +++++..+. .++......-+.+-+....+
T Consensus 59 ~~pivlVhG~~~~~~~~~~----------------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ql~~~V~~~l~ 122 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLP----------------LDYRLAILGWLTNGVYAFELSGGDGTYSLAVRGEQLFAYVDEVLA 122 (336)
T ss_pred CceEEEEccCcCCcchhhh----------------hhhhhcchHHHhcccccccccccCCCccccccHHHHHHHHHHHHh
Confidence 3378999999666544422 22225555555 666555432 22222222333333444444
Q ss_pred HcCCCCCCEEEEecChhHHHHHHHhhccC
Q 040989 505 RHKLEKLPLVALGASSGGYFVSALAKGLR 533 (700)
Q Consensus 505 ~~~l~~~pl~l~G~S~GG~~a~~la~~~~ 533 (700)
..+ ..++.|.||||||..+..+...++
T Consensus 123 ~~g--a~~v~LigHS~GG~~~ry~~~~~~ 149 (336)
T COG1075 123 KTG--AKKVNLIGHSMGGLDSRYYLGVLG 149 (336)
T ss_pred hcC--CCceEEEeecccchhhHHHHhhcC
Confidence 443 479999999999999998888765
No 185
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=91.58 E-value=1.2 Score=50.49 Aligned_cols=58 Identities=26% Similarity=0.449 Sum_probs=40.2
Q ss_pred cEEEEEcC-CCCcCCCc-------cc---HHHHHHHHHHHHHHc-CCCCCCEEEEecChhHHHHHHHhhc
Q 040989 474 FAIITISS-AGRCWTLG-------EE---RLVVREIIRWWVERH-KLEKLPLVALGASSGGYFVSALAKG 531 (700)
Q Consensus 474 yaV~avd~-~g~~w~~~-------~e---~~~v~a~l~~~~~~~-~l~~~pl~l~G~S~GG~~a~~la~~ 531 (700)
..++.+|+ .|.+++.. .+ +.++...++.|.+++ .+...|+|++|.|-||..+-.+|..
T Consensus 116 anllfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~ 185 (433)
T PLN03016 116 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQE 185 (433)
T ss_pred CcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHH
Confidence 57999995 46666531 22 234555666666665 3467899999999999988877764
No 186
>PLN02571 triacylglycerol lipase
Probab=91.37 E-value=0.27 Score=55.20 Aligned_cols=40 Identities=23% Similarity=0.191 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhcc
Q 040989 493 LVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGL 532 (700)
Q Consensus 493 ~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~ 532 (700)
..+.+.|+.+.+++.-...+|+++|||+||++|++.|..+
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~dl 247 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVDI 247 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHHH
Confidence 4455555666666653456899999999999999998764
No 187
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=90.92 E-value=0.89 Score=50.71 Aligned_cols=92 Identities=16% Similarity=0.244 Sum_probs=69.7
Q ss_pred ceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCC--CCcCCC----------------ccc
Q 040989 430 KAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSA--GRCWTL----------------GEE 491 (700)
Q Consensus 430 r~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~--g~~w~~----------------~~e 491 (700)
.|-|||.-|+.++-..|... .|+ +-..+-+.+-.++.+++| |..--+ .+-
T Consensus 80 ~gPIffYtGNEGdie~Fa~n-------tGF-----m~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQA 147 (492)
T KOG2183|consen 80 EGPIFFYTGNEGDIEWFANN-------TGF-----MWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQA 147 (492)
T ss_pred CCceEEEeCCcccHHHHHhc-------cch-----HHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHH
Confidence 37889999999987666433 333 445677888888999987 322111 122
Q ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC
Q 040989 492 RLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR 533 (700)
Q Consensus 492 ~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~ 533 (700)
..|-+.+|..+++..+-...|+++||-|-||.+++.+=.++|
T Consensus 148 LADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYP 189 (492)
T KOG2183|consen 148 LADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYP 189 (492)
T ss_pred HHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcCh
Confidence 477888899999888888899999999999999999988887
No 188
>PLN02408 phospholipase A1
Probab=90.92 E-value=0.31 Score=53.87 Aligned_cols=40 Identities=28% Similarity=0.246 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhcc
Q 040989 493 LVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGL 532 (700)
Q Consensus 493 ~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~ 532 (700)
+.+.+.|+.+.++++-....|++.|||+||++|.+.|..+
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 3455566677777754456799999999999999988764
No 189
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=90.57 E-value=1.9 Score=49.66 Aligned_cols=73 Identities=21% Similarity=0.164 Sum_probs=49.8
Q ss_pred HHHHHHCCcEEEEEcCCC--C------cCCCccc---------HHHHHHHHHHHHHH-cCCCCCCEEEEecChhHHHHHH
Q 040989 466 VLHALSRGFAIITISSAG--R------CWTLGEE---------RLVVREIIRWWVER-HKLEKLPLVALGASSGGYFVSA 527 (700)
Q Consensus 466 ~~~~~~~GyaV~avd~~g--~------~w~~~~e---------~~~v~a~l~~~~~~-~~l~~~pl~l~G~S~GG~~a~~ 527 (700)
...++++|||+++-|... . .|....+ .+....+-+.+++. +|-....-|-.|+|-||--++.
T Consensus 52 ~~~~~~~G~A~~~TD~Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~ 131 (474)
T PF07519_consen 52 MATALARGYATASTDSGHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLM 131 (474)
T ss_pred cchhhhcCeEEEEecCCCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHH
Confidence 356789999999999642 2 2321111 12333333444444 3656777899999999999999
Q ss_pred HhhccC--cCeEE
Q 040989 528 LAKGLR--FSSIA 538 (700)
Q Consensus 528 la~~~~--~~glv 538 (700)
+|.++| |+||+
T Consensus 132 ~AQryP~dfDGIl 144 (474)
T PF07519_consen 132 AAQRYPEDFDGIL 144 (474)
T ss_pred HHHhChhhcCeEE
Confidence 999997 88854
No 190
>PLN02209 serine carboxypeptidase
Probab=90.44 E-value=0.52 Score=53.56 Aligned_cols=60 Identities=23% Similarity=0.446 Sum_probs=41.5
Q ss_pred CCcEEEEEcC-CCCcCCCc----------ccHHHHHHHHHHHHHHc-CCCCCCEEEEecChhHHHHHHHhhc
Q 040989 472 RGFAIITISS-AGRCWTLG----------EERLVVREIIRWWVERH-KLEKLPLVALGASSGGYFVSALAKG 531 (700)
Q Consensus 472 ~GyaV~avd~-~g~~w~~~----------~e~~~v~a~l~~~~~~~-~l~~~pl~l~G~S~GG~~a~~la~~ 531 (700)
+-..++.+|+ .|.+++.. .++.++-..++.|.+++ .+...|+|++|.|-||..+-.+|..
T Consensus 116 ~~anllfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~ 187 (437)
T PLN02209 116 KTANIIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHE 187 (437)
T ss_pred hcCcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHH
Confidence 3457899995 46666531 22345556666666666 4566799999999999877777654
No 191
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=90.29 E-value=0.83 Score=54.43 Aligned_cols=42 Identities=17% Similarity=0.266 Sum_probs=26.8
Q ss_pred ccHHHHHHHHHHHHHHcC----CC---CCCEEEEecChhHHHHHHHhhc
Q 040989 490 EERLVVREIIRWWVERHK----LE---KLPLVALGASSGGYFVSALAKG 531 (700)
Q Consensus 490 ~e~~~v~a~l~~~~~~~~----l~---~~pl~l~G~S~GG~~a~~la~~ 531 (700)
.+.+-|.++|..+..-+. .+ +.-+++.||||||.+|..+...
T Consensus 154 dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tl 202 (973)
T KOG3724|consen 154 DQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTL 202 (973)
T ss_pred HHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhh
Confidence 344556666665543321 12 2338999999999998877664
No 192
>PLN02162 triacylglycerol lipase
Probab=89.89 E-value=0.42 Score=54.26 Aligned_cols=36 Identities=22% Similarity=0.379 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhc
Q 040989 494 VVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKG 531 (700)
Q Consensus 494 ~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~ 531 (700)
.+++.++...+++ ++.++++.|||+||++|...|..
T Consensus 263 ~I~~~L~~lL~k~--p~~kliVTGHSLGGALAtLaAa~ 298 (475)
T PLN02162 263 TIRQMLRDKLARN--KNLKYILTGHSLGGALAALFPAI 298 (475)
T ss_pred HHHHHHHHHHHhC--CCceEEEEecChHHHHHHHHHHH
Confidence 4555666666665 57899999999999999998764
No 193
>PLN02934 triacylglycerol lipase
Probab=89.77 E-value=0.41 Score=54.81 Aligned_cols=37 Identities=22% Similarity=0.332 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhc
Q 040989 493 LVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKG 531 (700)
Q Consensus 493 ~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~ 531 (700)
..+...++.+.+++ ++.++++.|||+||++|...|..
T Consensus 305 ~~v~~~lk~ll~~~--p~~kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 305 YAVRSKLKSLLKEH--KNAKFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred HHHHHHHHHHHHHC--CCCeEEEeccccHHHHHHHHHHH
Confidence 45677777777777 57899999999999999999864
No 194
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=89.40 E-value=3 Score=44.84 Aligned_cols=106 Identities=14% Similarity=0.228 Sum_probs=73.5
Q ss_pred EEEEee-cCCCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcC---CCccc----
Q 040989 420 DVIWQI-PDSPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCW---TLGEE---- 491 (700)
Q Consensus 420 ~l~~~~-P~~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w---~~~~e---- 491 (700)
.++.|- |+.+|++++-.|.-|.+-..-|..--.| |+. +.++++ |.|+.+|.+|+-- .++.+
T Consensus 35 ~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~------p~m----~ei~~~-fcv~HV~~PGqe~gAp~~p~~y~yP 103 (326)
T KOG2931|consen 35 HVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNF------PDM----AEILEH-FCVYHVDAPGQEDGAPSFPEGYPYP 103 (326)
T ss_pred EEEEecCCCCCCceEEEecccccchHhHhHHhhcC------HhH----HHHHhh-eEEEecCCCccccCCccCCCCCCCC
Confidence 444443 7767888999999888765423221122 322 344555 9999999998533 23333
Q ss_pred -HHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 492 -RLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 492 -~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
.+++++.|-.+.+.+++. -++.+|.-+|+++.+++|..+| +-|++
T Consensus 104 smd~LAd~l~~VL~~f~lk--~vIg~GvGAGAyIL~rFAl~hp~rV~GLv 151 (326)
T KOG2931|consen 104 SMDDLADMLPEVLDHFGLK--SVIGMGVGAGAYILARFALNHPERVLGLV 151 (326)
T ss_pred CHHHHHHHHHHHHHhcCcc--eEEEecccccHHHHHHHHhcChhheeEEE
Confidence 477888888888888654 5899999999999999999985 55555
No 195
>PLN03097 FHY3 Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional
Probab=89.39 E-value=1.1 Score=54.66 Aligned_cols=77 Identities=18% Similarity=0.280 Sum_probs=61.7
Q ss_pred cccccCcccCCHHHHHHHHHHHhhhccceEEEeeecCcE-------EEEEecC---------------------------
Q 040989 287 EDIVCGKTFTSKKDLIKKLKLGAAKKNFAFKVSKSTKDR-------FEVVCAD--------------------------- 332 (700)
Q Consensus 287 ~~l~vG~~F~~k~~~r~al~~~aI~~~f~~~~~kS~~~r-------~~~~C~~--------------------------- 332 (700)
.+=.+||+|.+.++-++=-..||-+..|.+|+.++.+++ -...|..
T Consensus 72 ~~P~vGMeF~S~eeA~~FYn~YA~~~GFsVRi~~srrsk~~~~ii~r~fvCsreG~~~~~~~~~~~~~~~~~k~~~~~~~ 151 (846)
T PLN03097 72 LEPLSGMEFESHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSFNRPRARQTKQDPENGT 151 (846)
T ss_pred ccCcCCCeECCHHHHHHHHHHHHhhcCceEEeeceeccCCCCcEEEEEEEEcCCCCCcccccccccccccccccCccccc
Confidence 345699999999999999999999999999987665432 1244533
Q ss_pred -------CCCccEEEEEeeCCCCeEEEEEecCCccccCC
Q 040989 333 -------TNCKWRLRATKTAEDEYFEIRRFSNIHICTQP 364 (700)
Q Consensus 333 -------~gC~Wri~A~~~~~~~~f~I~~~~~~HtC~~~ 364 (700)
.||+=+++..+ ...+.|.|.++...|++.+.
T Consensus 152 ~rR~~tRtGC~A~m~Vk~-~~~gkW~V~~fv~eHNH~L~ 189 (846)
T PLN03097 152 GRRSCAKTDCKASMHVKR-RPDGKWVIHSFVKEHNHELL 189 (846)
T ss_pred ccccccCCCCceEEEEEE-cCCCeEEEEEEecCCCCCCC
Confidence 47999999865 45578999999999999885
No 196
>PLN00413 triacylglycerol lipase
Probab=89.38 E-value=0.47 Score=53.96 Aligned_cols=36 Identities=11% Similarity=0.165 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhc
Q 040989 494 VVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKG 531 (700)
Q Consensus 494 ~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~ 531 (700)
.+...++.+.+++ +..++++.|||+||++|...|..
T Consensus 269 ~i~~~Lk~ll~~~--p~~kliVTGHSLGGALAtLaA~~ 304 (479)
T PLN00413 269 TILRHLKEIFDQN--PTSKFILSGHSLGGALAILFTAV 304 (479)
T ss_pred HHHHHHHHHHHHC--CCCeEEEEecCHHHHHHHHHHHH
Confidence 3555666666666 57789999999999999998864
No 197
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=89.34 E-value=0.47 Score=48.48 Aligned_cols=46 Identities=20% Similarity=0.306 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC-cCeEE
Q 040989 493 LVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR-FSSIA 538 (700)
Q Consensus 493 ~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~-~~glv 538 (700)
+-...+++|+.++-.+++.+|-++|.|.||-+|+.+|..++ ++++|
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~i~avV 50 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQISAVV 50 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSSEEEEE
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCCccEEE
Confidence 44678888998887778899999999999999999999986 44444
No 198
>PLN02324 triacylglycerol lipase
Probab=89.34 E-value=0.51 Score=52.96 Aligned_cols=40 Identities=23% Similarity=0.194 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhcc
Q 040989 493 LVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGL 532 (700)
Q Consensus 493 ~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~ 532 (700)
..+.+.|+.+++.++-....|+++|||+||++|++.|..+
T Consensus 197 eqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~dl 236 (415)
T PLN02324 197 EQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAADL 236 (415)
T ss_pred HHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHHH
Confidence 3455556667777754457899999999999999988753
No 199
>cd06396 PB1_NBR1 The PB1 domain is an essential part of NBR1 protein, next to BRCA1, a scaffold protein mediating specific protein-protein interaction with both titin protein kinase and with another scaffold protein p62. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domain, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. The NBR1 protein contains a type I PB1 domain.
Probab=88.74 E-value=1.2 Score=38.91 Aligned_cols=62 Identities=13% Similarity=0.182 Sum_probs=49.1
Q ss_pred CCeeceeecCC--CCCHHHHHHHHHhhcccCCceeEEEEEEEEeCCCCCceeeeecchhHHHHHhhccCCC
Q 040989 88 GGQTKGIIVSD--DITYKELVDRLYGIVKVDTNEYVITMKSLYKANIPTMPVEIVDDDDVRFFIQENAAHP 156 (700)
Q Consensus 88 G~~~kgI~V~~--~~ty~~l~~~l~~~l~ID~~~~~l~~k~~~~~~~~~~pi~I~dD~Dv~~ml~~~~~~~ 156 (700)
|++..-+.++. .+||.+|..+|-+.|+|+ .|.|||.= ..-.++.|++|.|++--+++..+.|
T Consensus 8 ~~d~~rf~~~~~~~~~~~~L~~ev~~rf~l~----~f~lKYlD---de~e~v~lssd~eLeE~~rl~~~~~ 71 (81)
T cd06396 8 NGESQSFLVSDSENTTWASVEAMVKVSFGLN----DIQIKYVD---EENEEVSVNSQGEYEEALKSAVRQG 71 (81)
T ss_pred CCeEEEEEecCCCCCCHHHHHHHHHHHhCCC----cceeEEEc---CCCCEEEEEchhhHHHHHHHHHhCC
Confidence 34444556666 889999999999999999 56778632 3578899999999999999877654
No 200
>PLN02802 triacylglycerol lipase
Probab=88.54 E-value=0.59 Score=53.53 Aligned_cols=40 Identities=28% Similarity=0.272 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhcc
Q 040989 493 LVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGL 532 (700)
Q Consensus 493 ~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~ 532 (700)
+.+.+.|+.+.++++-....|++.|||+||++|.+.|..+
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 3455556666677754457899999999999999988764
No 201
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=88.43 E-value=2.1 Score=45.76 Aligned_cols=101 Identities=19% Similarity=0.234 Sum_probs=43.7
Q ss_pred cCCCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHC---CcEEEEEcCCCCcC-----CCcccH-HHHH
Q 040989 426 PDSPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSR---GFAIITISSAGRCW-----TLGEER-LVVR 496 (700)
Q Consensus 426 P~~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~---GyaV~avd~~g~~w-----~~~~e~-~~v~ 496 (700)
|++|+|+ |+.||.|.++.+ |..+..++.+.+. |--|..++-...-+ ++-..+ ..++
T Consensus 2 ~~~~~Pv-ViwHGmGD~~~~--------------~~~m~~i~~~i~~~~PG~yV~si~ig~~~~~D~~~s~f~~v~~Qv~ 66 (279)
T PF02089_consen 2 PPSPLPV-VIWHGMGDSCCN--------------PSSMGSIKELIEEQHPGTYVHSIEIGNDPSEDVENSFFGNVNDQVE 66 (279)
T ss_dssp TTSS--E-EEE--TT--S----------------TTTHHHHHHHHHHHSTT--EEE--SSSSHHHHHHHHHHSHHHHHHH
T ss_pred CCCCCcE-EEEEcCccccCC--------------hhHHHHHHHHHHHhCCCceEEEEEECCCcchhhhhhHHHHHHHHHH
Confidence 5566765 467999987532 1123334444333 55555555432211 111111 2223
Q ss_pred HHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccCcCeEEEEEe
Q 040989 497 EIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLRFSSIALMIA 542 (700)
Q Consensus 497 a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~~~glv~~I~ 542 (700)
.+-+.+.+.-.+. .=+-++|+|.||-|.=.++.+.+-..+..+|.
T Consensus 67 ~vc~~l~~~p~L~-~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlIS 111 (279)
T PF02089_consen 67 QVCEQLANDPELA-NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLIS 111 (279)
T ss_dssp HHHHHHHH-GGGT-T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEE
T ss_pred HHHHHHhhChhhh-cceeeeeeccccHHHHHHHHHCCCCCceeEEE
Confidence 3333333322222 25889999999999999999875334444554
No 202
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.56 E-value=2.4 Score=44.52 Aligned_cols=93 Identities=17% Similarity=0.223 Sum_probs=55.8
Q ss_pred cCCCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCC----------cccHHHH
Q 040989 426 PDSPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTL----------GEERLVV 495 (700)
Q Consensus 426 P~~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~----------~~e~~~v 495 (700)
+..++.++++.-|+-|..+-|.+ -.......+-+.+.|..+++.||.--. ..|.-.+
T Consensus 25 ~~~~~~li~~IpGNPG~~gFY~~-------------F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL 91 (301)
T KOG3975|consen 25 SGEDKPLIVWIPGNPGLLGFYTE-------------FARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSL 91 (301)
T ss_pred CCCCceEEEEecCCCCchhHHHH-------------HHHHHHHhcccccceeEEeccccccCCcccccccccccccccch
Confidence 44678999999999777543311 111122223333779999888753321 1122111
Q ss_pred HHHHH---HHHHHcCCCCCCEEEEecChhHHHHHHHhhc
Q 040989 496 REIIR---WWVERHKLEKLPLVALGASSGGYFVSALAKG 531 (700)
Q Consensus 496 ~a~l~---~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~ 531 (700)
..=++ ++++++--.+..+|++|||-|++|++.+-..
T Consensus 92 ~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~ 130 (301)
T KOG3975|consen 92 QDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPS 130 (301)
T ss_pred hhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhh
Confidence 22222 3455664467899999999999999998663
No 203
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=87.31 E-value=1.8 Score=45.50 Aligned_cols=95 Identities=16% Similarity=0.232 Sum_probs=61.4
Q ss_pred EEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCC-----cEEEEEcCCCC-----cCC-----------C---
Q 040989 433 LFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRG-----FAIITISSAGR-----CWT-----------L--- 488 (700)
Q Consensus 433 vv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~G-----yaV~avd~~g~-----~w~-----------~--- 488 (700)
.+|+||.++.+..+- .++.+|+.+| --++.+|.-|. ..+ +
T Consensus 48 TIfIhGsgG~asS~~----------------~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n 111 (288)
T COG4814 48 TIFIHGSGGTASSLN----------------GMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDN 111 (288)
T ss_pred eEEEecCCCChhHHH----------------HHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecC
Confidence 367899999986642 3677888877 23455555441 000 0
Q ss_pred ----cccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhcc-------CcCeEEEEEecCCCC
Q 040989 489 ----GEERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGL-------RFSSIALMIAEGLFD 547 (700)
Q Consensus 489 ----~~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~-------~~~glv~~I~~G~~~ 547 (700)
.....-++.++.++.++++++ .+=+.||||||.-+..+...+ ++.-++ .+.|+|.
T Consensus 112 ~~s~~~~s~wlk~~msyL~~~Y~i~--k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V--~l~gpfN 177 (288)
T COG4814 112 TASGLDQSKWLKKAMSYLQKHYNIP--KFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLV--SLAGPFN 177 (288)
T ss_pred cCchhhHHHHHHHHHHHHHHhcCCc--eeeeeeeccccHHHHHHHHHhcCCCCCcchhheE--Eeccccc
Confidence 111345678888899998654 467899999999888887664 222233 3567777
No 204
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=87.29 E-value=2.7 Score=40.75 Aligned_cols=64 Identities=22% Similarity=0.160 Sum_probs=41.7
Q ss_pred HHHHHCCcEEEEEcCCCCcCCC--cccHH-HHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhcc
Q 040989 467 LHALSRGFAIITISSAGRCWTL--GEERL-VVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGL 532 (700)
Q Consensus 467 ~~~~~~GyaV~avd~~g~~w~~--~~e~~-~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~ 532 (700)
...+..++.|++++..|+...- ..... .+...++.+.+.. ...|.+++|+|+||.++..++..+
T Consensus 19 ~~~l~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~l~g~s~Gg~~a~~~a~~l 85 (212)
T smart00824 19 AAALRGRRDVSALPLPGFGPGEPLPASADALVEAQAEAVLRAA--GGRPFVLVGHSSGGLLAHAVAARL 85 (212)
T ss_pred HHhcCCCccEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHHhc--CCCCeEEEEECHHHHHHHHHHHHH
Confidence 3344567899999988754321 22222 2333444444433 367999999999999999888864
No 205
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=87.23 E-value=0.76 Score=50.42 Aligned_cols=38 Identities=24% Similarity=0.211 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhcc
Q 040989 493 LVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGL 532 (700)
Q Consensus 493 ~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~ 532 (700)
..+.+.++.++..+ ++..++++|||+||++|++.|...
T Consensus 155 ~~~~~~~~~L~~~~--~~~~i~vTGHSLGgAlA~laa~~i 192 (336)
T KOG4569|consen 155 SGLDAELRRLIELY--PNYSIWVTGHSLGGALASLAALDL 192 (336)
T ss_pred HHHHHHHHHHHHhc--CCcEEEEecCChHHHHHHHHHHHH
Confidence 45666777777777 489999999999999999998874
No 206
>PLN02753 triacylglycerol lipase
Probab=86.96 E-value=0.84 Score=52.54 Aligned_cols=39 Identities=23% Similarity=0.229 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHcCC---CCCCEEEEecChhHHHHHHHhhc
Q 040989 493 LVVREIIRWWVERHKL---EKLPLVALGASSGGYFVSALAKG 531 (700)
Q Consensus 493 ~~v~a~l~~~~~~~~l---~~~pl~l~G~S~GG~~a~~la~~ 531 (700)
+.+.+.|+.+.++++- ....|+++|||+||++|++.|..
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 4455566667776643 36799999999999999999865
No 207
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=86.88 E-value=1.1 Score=52.52 Aligned_cols=96 Identities=22% Similarity=0.279 Sum_probs=64.4
Q ss_pred CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCC-----CcCCCc-------ccHHHH
Q 040989 428 SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAG-----RCWTLG-------EERLVV 495 (700)
Q Consensus 428 ~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g-----~~w~~~-------~e~~~v 495 (700)
.++|.+|+.||.-+-. .-+. -..-.+.|+++|+-....+-|| ..|..+ .-..|.
T Consensus 468 g~~P~LLygYGay~is--l~p~------------f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Df 533 (712)
T KOG2237|consen 468 GSKPLLLYGYGAYGIS--LDPS------------FRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDF 533 (712)
T ss_pred CCCceEEEEeccccee--eccc------------cccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHH
Confidence 3678888777763332 3211 0112355778999888888876 355422 124778
Q ss_pred HHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeE
Q 040989 496 REIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSI 537 (700)
Q Consensus 496 ~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~gl 537 (700)
.+..+++++..=..+..+-+-|.|+||-++....-..| |.++
T Consensus 534 ia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~av 577 (712)
T KOG2237|consen 534 IACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAV 577 (712)
T ss_pred HHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhh
Confidence 88888888874447789999999999999987776655 5453
No 208
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=86.82 E-value=1.7 Score=47.30 Aligned_cols=93 Identities=18% Similarity=0.215 Sum_probs=57.0
Q ss_pred EEEEEcCC-CCcCCCc----------ccHHHHHHHHHHHHHHc-CCCCCCEEEEecChhHHHHHHHhhcc----------
Q 040989 475 AIITISSA-GRCWTLG----------EERLVVREIIRWWVERH-KLEKLPLVALGASSGGYFVSALAKGL---------- 532 (700)
Q Consensus 475 aV~avd~~-g~~w~~~----------~e~~~v~a~l~~~~~~~-~l~~~pl~l~G~S~GG~~a~~la~~~---------- 532 (700)
.|+.+|++ |-++|.. ..+.++-.+++.|.+++ .+...|+|++|.|-||..+-.+|...
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~ 82 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEP 82 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCC
Confidence 57888975 6666532 12355566666666666 45789999999999999888887652
Q ss_pred --CcCeEEEEEecCCCCCCCCCCCCCCeEEEccCCChhH
Q 040989 533 --RFSSIALMIAEGLFDQMDIPEDYPPTLFVHMPKDSYR 569 (700)
Q Consensus 533 --~~~glv~~I~~G~~~~~~~~~~yPP~lf~hm~~D~~~ 569 (700)
.+.|++ |-.|-.+.......|+|-++.|+.-|...
T Consensus 83 ~inLkGi~--IGNg~t~~~~~~~~~~~~~~~~gli~~~~ 119 (319)
T PLN02213 83 PINLQGYM--LGNPVTYMDFEQNFRIPYAYGMGLISDEI 119 (319)
T ss_pred ceeeeEEE--eCCCCCCccccchhHhhHHHhcCCCCHHH
Confidence 344432 33333222212345566666666555443
No 209
>PLN02310 triacylglycerol lipase
Probab=85.85 E-value=1 Score=50.51 Aligned_cols=39 Identities=23% Similarity=0.179 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHcC--CCCCCEEEEecChhHHHHHHHhhcc
Q 040989 494 VVREIIRWWVERHK--LEKLPLVALGASSGGYFVSALAKGL 532 (700)
Q Consensus 494 ~v~a~l~~~~~~~~--l~~~pl~l~G~S~GG~~a~~la~~~ 532 (700)
.+.+.|+.+.+.++ -....|.+.|||+||++|++.|..+
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl 230 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEA 230 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHH
Confidence 34455556665552 2356899999999999999988653
No 210
>PLN03037 lipase class 3 family protein; Provisional
Probab=85.34 E-value=1.1 Score=51.48 Aligned_cols=37 Identities=30% Similarity=0.249 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHcCC--CCCCEEEEecChhHHHHHHHhhc
Q 040989 495 VREIIRWWVERHKL--EKLPLVALGASSGGYFVSALAKG 531 (700)
Q Consensus 495 v~a~l~~~~~~~~l--~~~pl~l~G~S~GG~~a~~la~~ 531 (700)
+.+.|+.+.+.+.- ....|++.|||+||++|++.|..
T Consensus 300 Vl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 300 VMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 44445555555531 35689999999999999998865
No 211
>PLN02761 lipase class 3 family protein
Probab=85.02 E-value=1.2 Score=51.24 Aligned_cols=39 Identities=18% Similarity=0.097 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHcC----CCCCCEEEEecChhHHHHHHHhhc
Q 040989 493 LVVREIIRWWVERHK----LEKLPLVALGASSGGYFVSALAKG 531 (700)
Q Consensus 493 ~~v~a~l~~~~~~~~----l~~~pl~l~G~S~GG~~a~~la~~ 531 (700)
..+.+.|+.+.+.++ -....|++.|||+||++|++.|..
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 445555666666662 245689999999999999998864
No 212
>PLN02847 triacylglycerol lipase
Probab=84.85 E-value=1.2 Score=52.02 Aligned_cols=36 Identities=17% Similarity=0.111 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhcc
Q 040989 495 VREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGL 532 (700)
Q Consensus 495 v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~ 532 (700)
+...|....+++ ++..+++.|||+||++|+.++..+
T Consensus 237 i~~~L~kal~~~--PdYkLVITGHSLGGGVAALLAilL 272 (633)
T PLN02847 237 STPCLLKALDEY--PDFKIKIVGHSLGGGTAALLTYIL 272 (633)
T ss_pred HHHHHHHHHHHC--CCCeEEEeccChHHHHHHHHHHHH
Confidence 344455555555 688999999999999999998753
No 213
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=84.22 E-value=3.9 Score=40.76 Aligned_cols=82 Identities=17% Similarity=0.300 Sum_probs=49.1
Q ss_pred HHHHHHHHCCcE-EEEEcCCC-CcC----CCccc-HHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--c
Q 040989 464 LLVLHALSRGFA-IITISSAG-RCW----TLGEE-RLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--F 534 (700)
Q Consensus 464 ~~~~~~~~~Gya-V~avd~~g-~~w----~~~~e-~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~ 534 (700)
+-...+++.|.- .+.++... .+| .-..+ +..-++.-++++++ .+++ ..+..|+||||++|+.+-.++| |
T Consensus 49 ~ala~fie~G~vQlft~~gldsESf~a~h~~~adr~~rH~AyerYv~eE-alpg-s~~~sgcsmGayhA~nfvfrhP~lf 126 (227)
T COG4947 49 DALASFIEEGLVQLFTLSGLDSESFLATHKNAADRAERHRAYERYVIEE-ALPG-STIVSGCSMGAYHAANFVFRHPHLF 126 (227)
T ss_pred HHHHHHHhcCcEEEEEecccchHhHhhhcCCHHHHHHHHHHHHHHHHHh-hcCC-CccccccchhhhhhhhhheeChhHh
Confidence 344556777764 34456544 222 22222 23334444556655 3454 4678999999999999999987 5
Q ss_pred CeEEEEEecCCCCCC
Q 040989 535 SSIALMIAEGLFDQM 549 (700)
Q Consensus 535 ~glv~~I~~G~~~~~ 549 (700)
.+++ .++|.+...
T Consensus 127 tkvi--alSGvYdar 139 (227)
T COG4947 127 TKVI--ALSGVYDAR 139 (227)
T ss_pred hhhe--eecceeeHH
Confidence 5544 467776654
No 214
>PLN02719 triacylglycerol lipase
Probab=84.17 E-value=1.4 Score=50.70 Aligned_cols=39 Identities=28% Similarity=0.240 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHcCC---CCCCEEEEecChhHHHHHHHhhc
Q 040989 493 LVVREIIRWWVERHKL---EKLPLVALGASSGGYFVSALAKG 531 (700)
Q Consensus 493 ~~v~a~l~~~~~~~~l---~~~pl~l~G~S~GG~~a~~la~~ 531 (700)
..+.+.|+.+.+.++- ....|++.|||+||++|++.|..
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 4455556666666642 34689999999999999998865
No 215
>cd06401 PB1_TFG The PB1 domain found in TFG protein, an oncogenic gene product and fusion partner to nerve growth factor tyrosine kinase receptor TrkA and to the tyrosine kinase ALK. The PB1 domain is a modular domain mediating specific protein-protein interaction in many critical cell processes, such as osteoclastogenesis, angiogenesis, early cardiovascular development and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. The PB1 domains of TFG represent a type I/II PB1 domain. The physiological function of TFG remains unknown.
Probab=83.71 E-value=3.1 Score=36.33 Aligned_cols=62 Identities=24% Similarity=0.319 Sum_probs=46.3
Q ss_pred CCeeceeecCC-CCCHHHHHHHHHhhcccC-CceeEEEEEEEEeCCCCCceeeeecchhHHHHHhhc
Q 040989 88 GGQTKGIIVSD-DITYKELVDRLYGIVKVD-TNEYVITMKSLYKANIPTMPVEIVDDDDVRFFIQEN 152 (700)
Q Consensus 88 G~~~kgI~V~~-~~ty~~l~~~l~~~l~ID-~~~~~l~~k~~~~~~~~~~pi~I~dD~Dv~~ml~~~ 152 (700)
|++.+-+.++. .+||.+|.+++.+.|+.. +..-.+.+||+=+ .-.+++|.++.|++.=+...
T Consensus 8 g~DiR~~~~~~~~~t~~~L~~~v~~~F~~~~~~~~~flIKYkD~---dGDlVTIts~~dL~~A~~~~ 71 (81)
T cd06401 8 GDDIRRIPIHNEDITYDELLLMMQRVFRGKLGSSDDVLIKYKDE---DGDLITIFDSSDLSFAIQCS 71 (81)
T ss_pred CCeEEEEeccCccccHHHHHHHHHHHhccccCCcccEEEEEECC---CCCEEEeccHHHHHHHHhcC
Confidence 56666788886 489999999999999854 3344557776433 45789999999999876533
No 216
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=83.40 E-value=1.7 Score=45.06 Aligned_cols=37 Identities=14% Similarity=0.099 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhcc
Q 040989 493 LVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGL 532 (700)
Q Consensus 493 ~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~ 532 (700)
..+.+-++.+.+++ +.++++.|||.||.+|...|...
T Consensus 69 ~~A~~yl~~~~~~~---~~~i~v~GHSkGGnLA~yaa~~~ 105 (224)
T PF11187_consen 69 KSALAYLKKIAKKY---PGKIYVTGHSKGGNLAQYAAANC 105 (224)
T ss_pred HHHHHHHHHHHHhC---CCCEEEEEechhhHHHHHHHHHc
Confidence 34445555666655 33699999999999999998874
No 217
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=82.50 E-value=2.2 Score=47.79 Aligned_cols=67 Identities=12% Similarity=0.050 Sum_probs=43.8
Q ss_pred HHHHHHHHHCCcEE----EE--EcCCCCcCCCcccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhcc
Q 040989 463 RLLVLHALSRGFAI----IT--ISSAGRCWTLGEERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGL 532 (700)
Q Consensus 463 ~~~~~~~~~~GyaV----~a--vd~~g~~w~~~~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~ 532 (700)
..+++.|.+.||.. .+ .|-|-.......-...+++.|+...+.. +.|++|+||||||.++..+-...
T Consensus 68 ~~li~~L~~~GY~~~~~l~~~pYDWR~~~~~~~~~~~~lk~~ie~~~~~~---~~kv~li~HSmGgl~~~~fl~~~ 140 (389)
T PF02450_consen 68 AKLIENLEKLGYDRGKDLFAAPYDWRLSPAERDEYFTKLKQLIEEAYKKN---GKKVVLIAHSMGGLVARYFLQWM 140 (389)
T ss_pred HHHHHHHHhcCcccCCEEEEEeechhhchhhHHHHHHHHHHHHHHHHHhc---CCcEEEEEeCCCchHHHHHHHhc
Confidence 35788899988754 22 2333211111222356677777666554 78999999999999998876665
No 218
>cd06411 PB1_p51 The PB1 domain is present in the p51 protein, a homolog of the p67 protein. p51 plays an important role in NADPH oxidase activation during phagosytosis. The PB1 domain is a modular domain mediating specific protein-protein interaction in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain mo
Probab=81.29 E-value=3.5 Score=35.73 Aligned_cols=59 Identities=10% Similarity=0.012 Sum_probs=46.9
Q ss_pred ceeecCCCCCHHHHHHHHHhhcccCCceeEEEEEEEEeCCCCCceeeeecchhHHHHHhhcc
Q 040989 92 KGIIVSDDITYKELVDRLYGIVKVDTNEYVITMKSLYKANIPTMPVEIVDDDDVRFFIQENA 153 (700)
Q Consensus 92 kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l~~k~~~~~~~~~~pi~I~dD~Dv~~ml~~~~ 153 (700)
-.|.+++..+|++|..+|.++|.+-+++.+|+++ =+ ...-..++|.-+.+++..-....
T Consensus 9 Vai~v~~g~~y~~L~~~ls~kL~l~~~~~~LSY~--~~-~~~~~~v~l~~e~~me~aW~~v~ 67 (78)
T cd06411 9 VALRAPRGADVSSLRALLSQALPQQAQRGQLSYR--AP-GEDGHWVPISGEESLQRAWQDVA 67 (78)
T ss_pred EEEEccCCCCHHHHHHHHHHHhcCChhhcEEEec--CC-CCCccEeecCcchHHHHHHHhcc
Confidence 5899999999999999999999999998865444 32 22236688888899999887544
No 219
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=80.39 E-value=6.8 Score=44.82 Aligned_cols=113 Identities=17% Similarity=0.253 Sum_probs=60.9
Q ss_pred cCCeEEEEe-ecC--CC--ceEEEEeccC-CCCCCccccCCCCCCCC---CCCchHHHHHHHHHHCCcEEEEEcCC-CCc
Q 040989 416 RNGTDVIWQ-IPD--SP--KAVLFLAHGC-NGRAVHFWDRSPNCPNC---IGLPEERLLVLHALSRGFAIITISSA-GRC 485 (700)
Q Consensus 416 ~~G~~l~~~-~P~--~p--r~vvv~lHG~-~~~~~~~~~~s~~c~~c---~glpe~~~~~~~~~~~GyaV~avd~~-g~~ 485 (700)
..|+.|+|+ +++ +| +|+||+|-|+ |.+...-... ...|.= -|. .+......=..=-.+|.+|++ |-+
T Consensus 54 ~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~G~~~-E~GPf~v~~~G~--tL~~N~ySWnk~aNiLfLd~PvGvG 130 (454)
T KOG1282|consen 54 SEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLGGLFE-ENGPFRVKYNGK--TLYLNPYSWNKEANILFLDQPVGVG 130 (454)
T ss_pred CCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchhhhhh-hcCCeEEcCCCC--cceeCCccccccccEEEEecCCcCC
Confidence 356778555 443 34 7899999988 4443221110 001110 000 000000000111246777764 656
Q ss_pred CCCc--------cc---HHHHHHHHHHHHHHc-CCCCCCEEEEecChhHHHHHHHhhc
Q 040989 486 WTLG--------EE---RLVVREIIRWWVERH-KLEKLPLVALGASSGGYFVSALAKG 531 (700)
Q Consensus 486 w~~~--------~e---~~~v~a~l~~~~~~~-~l~~~pl~l~G~S~GG~~a~~la~~ 531 (700)
|+.. .| +.|.-..++.|.+++ .+...++|+.|.|-+|..+=.||..
T Consensus 131 FSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~ 188 (454)
T KOG1282|consen 131 FSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQE 188 (454)
T ss_pred ccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHH
Confidence 6531 12 355666666777776 5577899999999999777666654
No 220
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=80.15 E-value=8.4 Score=43.42 Aligned_cols=90 Identities=19% Similarity=0.151 Sum_probs=63.5
Q ss_pred eEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCC-----CcCCCcccH-HHHHHHHHHHHH
Q 040989 431 AVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAG-----RCWTLGEER-LVVREIIRWWVE 504 (700)
Q Consensus 431 ~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g-----~~w~~~~e~-~~v~a~l~~~~~ 504 (700)
.-|+++|=|--.. ..++-+ ++-+++..+++.|+-|..+|-++ +.|.+..-. ..+..+++.+++
T Consensus 108 ~PlLiVpP~iNk~-yi~Dl~----------~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~ 176 (445)
T COG3243 108 RPLLIVPPWINKF-YILDLS----------PEKSLVRWLLEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKD 176 (445)
T ss_pred CceEeeccccCce-eEEeCC----------CCccHHHHHHHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHH
Confidence 3466777775542 124422 23468999999999999999764 344554444 667777878877
Q ss_pred HcCCCCCCEEEEecChhHHHHHHHhhccC
Q 040989 505 RHKLEKLPLVALGASSGGYFVSALAKGLR 533 (700)
Q Consensus 505 ~~~l~~~pl~l~G~S~GG~~a~~la~~~~ 533 (700)
..| -..|-+.|+++||-++...++.++
T Consensus 177 itg--~~~InliGyCvGGtl~~~ala~~~ 203 (445)
T COG3243 177 ITG--QKDINLIGYCVGGTLLAAALALMA 203 (445)
T ss_pred HhC--ccccceeeEecchHHHHHHHHhhh
Confidence 764 368999999999999888777654
No 221
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=79.23 E-value=16 Score=37.53 Aligned_cols=63 Identities=14% Similarity=0.207 Sum_probs=39.0
Q ss_pred HHHHHHHCCcEEEEEcCCCCcCCCc-ccH-HHHHHHHHHHHHHcCCCC-CCEEEEecChhHHHHHHH
Q 040989 465 LVLHALSRGFAIITISSAGRCWTLG-EER-LVVREIIRWWVERHKLEK-LPLVALGASSGGYFVSAL 528 (700)
Q Consensus 465 ~~~~~~~~GyaV~avd~~g~~w~~~-~e~-~~v~a~l~~~~~~~~l~~-~pl~l~G~S~GG~~a~~l 528 (700)
.+..-.++|+.++.+-+.-....++ ... ..++.+++.+.+... .+ .|+++-.+|.||++...-
T Consensus 19 Y~~~Y~~~g~~il~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~il~H~FSnGG~~~~~~ 84 (240)
T PF05705_consen 19 YSDLYQDPGFDILLVTSPPADFFWPSKRLAPAADKLLELLSDSQS-ASPPPILFHSFSNGGSFLYSQ 84 (240)
T ss_pred HHHHHHhcCCeEEEEeCCHHHHeeeccchHHHHHHHHHHhhhhcc-CCCCCEEEEEEECchHHHHHH
Confidence 3455566999999998875333333 222 344445555544332 33 499999999977776544
No 222
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=78.13 E-value=3.4 Score=42.27 Aligned_cols=102 Identities=18% Similarity=0.131 Sum_probs=65.8
Q ss_pred eeccCCeEEEEeec-CCCceEEEEeccC-CCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCCCcc
Q 040989 413 VELRNGTDVIWQIP-DSPKAVLFLAHGC-NGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWTLGE 490 (700)
Q Consensus 413 ~~~~~G~~l~~~~P-~~pr~vvv~lHG~-~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~~~~ 490 (700)
...++|+.+.|+-- ..|+.+|++ -|. |..-.||-++ +-..+-..-+.++|.|++|=+-+.+.
T Consensus 25 kv~vng~ql~y~~~G~G~~~iLli-pGalGs~~tDf~pq---------------l~~l~k~l~~TivawDPpGYG~SrPP 88 (277)
T KOG2984|consen 25 KVHVNGTQLGYCKYGHGPNYILLI-PGALGSYKTDFPPQ---------------LLSLFKPLQVTIVAWDPPGYGTSRPP 88 (277)
T ss_pred eeeecCceeeeeecCCCCceeEec-ccccccccccCCHH---------------HHhcCCCCceEEEEECCCCCCCCCCC
Confidence 35678999977653 466766555 455 4444444322 23333344499999999985554432
Q ss_pred c--------HHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC
Q 040989 491 E--------RLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR 533 (700)
Q Consensus 491 e--------~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~ 533 (700)
| ..|++++++-.. .+ .-.|+-++|-|=||-.|+.+|++.+
T Consensus 89 ~Rkf~~~ff~~Da~~avdLM~-aL--k~~~fsvlGWSdGgiTalivAak~~ 136 (277)
T KOG2984|consen 89 ERKFEVQFFMKDAEYAVDLME-AL--KLEPFSVLGWSDGGITALIVAAKGK 136 (277)
T ss_pred cccchHHHHHHhHHHHHHHHH-Hh--CCCCeeEeeecCCCeEEEEeeccCh
Confidence 2 256666665443 23 4568999999999999999998864
No 223
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=77.42 E-value=3.9 Score=47.99 Aligned_cols=63 Identities=13% Similarity=0.139 Sum_probs=43.7
Q ss_pred HHHHHHHHCCcEEEEEcCCCCcCCC--c--------ccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhh
Q 040989 464 LLVLHALSRGFAIITISSAGRCWTL--G--------EERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAK 530 (700)
Q Consensus 464 ~~~~~~~~~GyaV~avd~~g~~w~~--~--------~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~ 530 (700)
.+++.|.+.||- -.+-.+--+.| . .-...+++.|+.+.+.++ +.+++|+||||||.+++.+-.
T Consensus 160 kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~ng--gkKVVLV~HSMGglv~lyFL~ 232 (642)
T PLN02517 160 VLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNG--GKKVVVVPHSMGVLYFLHFMK 232 (642)
T ss_pred HHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcC--CCeEEEEEeCCchHHHHHHHH
Confidence 378899999996 33433322222 1 112567888887776653 689999999999999988644
No 224
>cd06398 PB1_Joka2 The PB1 domain is present in the Nicotiana plumbaginifolia Joka2 protein which interacts with sulfur stress inducible UP9 protein. The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes, such as osteoclastogenesis, angiogenesis, early cardiovascular development and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domain, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module
Probab=77.06 E-value=15 Score=32.71 Aligned_cols=73 Identities=18% Similarity=0.287 Sum_probs=49.5
Q ss_pred CeeceeecC-----CCCCHHHHHHHHHhhcccCCceeEEEEEEEEeCCCCCceeeeecchhHHHHHhhccCCCCCCCccE
Q 040989 89 GQTKGIIVS-----DDITYKELVDRLYGIVKVDTNEYVITMKSLYKANIPTMPVEIVDDDDVRFFIQENAAHPTELRSPI 163 (700)
Q Consensus 89 ~~~kgI~V~-----~~~ty~~l~~~l~~~l~ID~~~~~l~~k~~~~~~~~~~pi~I~dD~Dv~~ml~~~~~~~~~~~~~L 163 (700)
++.+-+.+| ..++|++|.++|.+.|+|.+. ..+.|+ |.-. --..++|.+|.|+..=+..++.. ....+|
T Consensus 9 ~~~rRf~l~~~~~~~d~~~~~L~~kI~~~f~l~~~-~~~~l~--Y~De-dgd~V~l~~D~DL~~a~~~~~~~--~~~~~l 82 (91)
T cd06398 9 GTLRRFTFPVAENQLDLNMDGLREKVEELFSLSPD-ADLSLT--YTDE-DGDVVTLVDDNDLTDAIQYFCSG--SRLNPL 82 (91)
T ss_pred CEEEEEEeccccccCCCCHHHHHHHHHHHhCCCCC-CcEEEE--EECC-CCCEEEEccHHHHHHHHHHHhcc--CCCceE
Confidence 334445555 379999999999999999873 334555 4322 45678999999999888865321 233455
Q ss_pred EEEE
Q 040989 164 CITI 167 (700)
Q Consensus 164 ~i~v 167 (700)
=|.|
T Consensus 83 rl~v 86 (91)
T cd06398 83 RIDV 86 (91)
T ss_pred EEEE
Confidence 5544
No 225
>PF03106 WRKY: WRKY DNA -binding domain; InterPro: IPR003657 The WRKY domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger- like motif. The WRKY domain is found in one or two copies in a superfamily of plant transcription factors involved in the regulation of various physiological programs that are unique to plants, including pathogen defence, senescence, trichome development and the biosynthesis of secondary metabolites. The WRKY domain binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core of the W box is essential for function and WRKY binding []. Some proteins known to contain a WRKY domain include Arabidopsis thaliana ZAP1 (Zinc-dependent Activator Protein-1) and AtWRKY44/TTG2, a protein involved in trichome development and anthocyanin pigmentation; and wild oat ABF1-2, two proteins involved in the gibberelic acid-induced expression of the alpha-Amy2 gene. Structural studies indicate that this domain is a four-stranded beta-sheet with a zinc binding pocket, forming a novel zinc and DNA binding structure []. The WRKYGQK residues correspond to the most N-terminal beta-strand, which enables extensive hydrophobic interactions, contributing to the structural stability of the beta-sheet.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2AYD_A 1WJ2_A 2LEX_A.
Probab=76.81 E-value=7.4 Score=32.03 Aligned_cols=49 Identities=18% Similarity=0.291 Sum_probs=36.5
Q ss_pred ceEEEeeecC-cEEEEEecCCCCccEEEEEeeCCCCeEEEEEecCCcccc
Q 040989 314 FAFKVSKSTK-DRFEVVCADTNCKWRLRATKTAEDEYFEIRRFSNIHICT 362 (700)
Q Consensus 314 f~~~~~kS~~-~r~~~~C~~~gC~Wri~A~~~~~~~~f~I~~~~~~HtC~ 362 (700)
+.=+.++.++ -|--.+|...+|+=+-+.-+..+.....|.+|.+.|||.
T Consensus 10 YGqK~i~g~~~pRsYYrCt~~~C~akK~Vqr~~~d~~~~~vtY~G~H~h~ 59 (60)
T PF03106_consen 10 YGQKNIKGSPYPRSYYRCTHPGCPAKKQVQRSADDPNIVIVTYEGEHNHP 59 (60)
T ss_dssp EEEEEETTTTCEEEEEEEECTTEEEEEEEEEETTCCCEEEEEEES--SS-
T ss_pred ccCcccCCCceeeEeeeccccChhheeeEEEecCCCCEEEEEEeeeeCCC
Confidence 3345566654 455689999999999999988877777788999999995
No 226
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=76.76 E-value=5.9 Score=43.91 Aligned_cols=108 Identities=22% Similarity=0.294 Sum_probs=71.4
Q ss_pred ccCCeEE-EEee--cCC--Cc--eEEEEeccCCCCCCccccC--CCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCc
Q 040989 415 LRNGTDV-IWQI--PDS--PK--AVLFLAHGCNGRAVHFWDR--SPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRC 485 (700)
Q Consensus 415 ~~~G~~l-~~~~--P~~--pr--~vvv~lHG~~~~~~~~~~~--s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~ 485 (700)
.+.|.++ +..+ |.. ++ --|+++||+-++--.|++- -..-|.-.|.- .+.-|-|+|++..|=+
T Consensus 130 eIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~---------~d~~FEVI~PSlPGyg 200 (469)
T KOG2565|consen 130 EIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNE---------SDYAFEVIAPSLPGYG 200 (469)
T ss_pred hhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCc---------cceeEEEeccCCCCcc
Confidence 5667766 4444 321 11 2467899998885555431 11111111221 1345889999999989
Q ss_pred CCC-----cccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC
Q 040989 486 WTL-----GEERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR 533 (700)
Q Consensus 486 w~~-----~~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~ 533 (700)
|+- +-.+..++.+++.++-|.|+. ..|+-|---|.-+++.||.-+|
T Consensus 201 wSd~~sk~GFn~~a~ArvmrkLMlRLg~n--kffiqGgDwGSiI~snlasLyP 251 (469)
T KOG2565|consen 201 WSDAPSKTGFNAAATARVMRKLMLRLGYN--KFFIQGGDWGSIIGSNLASLYP 251 (469)
T ss_pred cCcCCccCCccHHHHHHHHHHHHHHhCcc--eeEeecCchHHHHHHHHHhhcc
Confidence 974 233567788888898888754 6899999999999999998875
No 227
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=76.60 E-value=5.7 Score=44.45 Aligned_cols=59 Identities=17% Similarity=0.306 Sum_probs=49.3
Q ss_pred HHHHHHHHCCcEEEEEcCCCCcCCC--ccc-HHHHHHHHHHHHHHcCCCCCCEEEEecChhHHH
Q 040989 464 LLVLHALSRGFAIITISSAGRCWTL--GEE-RLVVREIIRWWVERHKLEKLPLVALGASSGGYF 524 (700)
Q Consensus 464 ~~~~~~~~~GyaV~avd~~g~~w~~--~~e-~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~ 524 (700)
.+...|.++|+.|+.+|+..=.|+- +++ ..|+..+++....+++ ..++.|+|.|.|.=+
T Consensus 278 ~v~~~l~~~gvpVvGvdsLRYfW~~rtPe~~a~Dl~r~i~~y~~~w~--~~~~~liGySfGADv 339 (456)
T COG3946 278 EVAEALQKQGVPVVGVDSLRYFWSERTPEQIAADLSRLIRFYARRWG--AKRVLLIGYSFGADV 339 (456)
T ss_pred HHHHHHHHCCCceeeeehhhhhhccCCHHHHHHHHHHHHHHHHHhhC--cceEEEEeecccchh
Confidence 4788999999999999998777863 333 5788999999888885 789999999999743
No 228
>PF14560 Ubiquitin_2: Ubiquitin-like domain; PDB: 1WJN_A 2KJ6_A 2KJR_A 1V6E_A 1T0Y_A.
Probab=76.39 E-value=3.6 Score=35.90 Aligned_cols=55 Identities=18% Similarity=0.129 Sum_probs=39.7
Q ss_pred eeecCCCCCHHHHHHHHHhhcccCCceeEEEEEEEEeCCCCCceeeeecchhHHHHHh
Q 040989 93 GIIVSDDITYKELVDRLYGIVKVDTNEYVITMKSLYKANIPTMPVEIVDDDDVRFFIQ 150 (700)
Q Consensus 93 gI~V~~~~ty~~l~~~l~~~l~ID~~~~~l~~k~~~~~~~~~~pi~I~dD~Dv~~ml~ 150 (700)
-+.++..+|..+|+.+|+..+|+.++.++|.+. . ......+..+.||..-..++.
T Consensus 17 ekr~~~~~Tv~eLK~kl~~~~Gi~~~~m~L~l~--~-~~~~~~~~~~~dd~~~L~~y~ 71 (87)
T PF14560_consen 17 EKRFPKSITVSELKQKLEKLTGIPPSDMRLQLK--S-DKDDSKIEELDDDDATLGSYG 71 (87)
T ss_dssp EEEEETTSBHHHHHHHHHHHHTS-TTTEEEEEE----TSSSSEEEESSGSSSBCCHHT
T ss_pred EEEcCCCCCHHHHHHHHHHHhCCCcccEEEEEE--e-cCCCccccccCCCccEeecCC
Confidence 478899999999999999999999999976552 2 223455556666666555664
No 229
>cd06397 PB1_UP1 Uncharacterized protein 1. The PB1 domain is a modular domain mediating specific protein-protein interaction which play a role in many critical cell processes, such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domain, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions.
Probab=76.19 E-value=8.4 Score=33.57 Aligned_cols=62 Identities=13% Similarity=0.266 Sum_probs=50.8
Q ss_pred EEeCCeeceeecCCCCCHHHHHHHHHhhcccCCceeEEEEEEEEeCCCCCceeeeecchhHHHHHhhc
Q 040989 85 LYSGGQTKGIIVSDDITYKELVDRLYGIVKVDTNEYVITMKSLYKANIPTMPVEIVDDDDVRFFIQEN 152 (700)
Q Consensus 85 ~Y~G~~~kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l~~k~~~~~~~~~~pi~I~dD~Dv~~ml~~~ 152 (700)
+| +|..+-+..|..-||..|-+||+..|+|.+.. +.++|.=. --..|+|++|.||+.+..+.
T Consensus 6 ~~-~g~~RRf~~~~~pt~~~L~~kl~~Lf~lp~~~--~~vtYiDe---D~D~ITlssd~eL~d~~~~~ 67 (82)
T cd06397 6 SF-LGDTRRIVFPDIPTWEALASKLENLYNLPEIK--VGVTYIDN---DNDEITLSSNKELQDFYRLS 67 (82)
T ss_pred Ee-CCceEEEecCCCccHHHHHHHHHHHhCCChhH--eEEEEEcC---CCCEEEecchHHHHHHHHhc
Confidence 45 45667788999999999999999999999875 57786332 45789999999999999754
No 230
>cd06404 PB1_aPKC PB1 domain is an essential modular domain of the atypical protein kinase C (aPKC) which in complex with Par6 and Par3 proteins is crucial for establishment of apical-basal polarity of animal cells. PB1 domain is a modular domain mediating specific protein-protein interaction which play roles in many critical cell processes. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi,
Probab=73.98 E-value=17 Score=32.00 Aligned_cols=73 Identities=14% Similarity=0.200 Sum_probs=53.1
Q ss_pred CCeeceeecCCCCCHHHHHHHHHhhcccCCceeEEEEEEEEeCCCCCceeeeecchhHHHHHhhccCCCCCCCccEEEEE
Q 040989 88 GGQTKGIIVSDDITYKELVDRLYGIVKVDTNEYVITMKSLYKANIPTMPVEIVDDDDVRFFIQENAAHPTELRSPICITI 167 (700)
Q Consensus 88 G~~~kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l~~k~~~~~~~~~~pi~I~dD~Dv~~ml~~~~~~~~~~~~~L~i~v 167 (700)
+|+..-+.++..+||++|..++-+++++.+.. .+.|||+=. .-.|+.|+.|..|.-=+++-..| ++..|.|-|
T Consensus 8 ~gdi~it~~d~~~s~e~L~~~v~~~c~~~~~q-~ft~kw~DE---EGDp~tiSS~~EL~EA~rl~~~n---~~~~l~ihv 80 (83)
T cd06404 8 NGDIMITSIDPSISLEELCNEVRDMCRFHNDQ-PFTLKWIDE---EGDPCTISSQMELEEAFRLYELN---KDSELNIHV 80 (83)
T ss_pred cCcEEEEEcCCCcCHHHHHHHHHHHhCCCCCC-cEEEEEECC---CCCceeecCHHHHHHHHHHHHhc---CcccEEEEe
Confidence 34556677788999999999999999998742 346775332 46789999999999888765544 344566544
No 231
>cd01789 Alp11_N Ubiquitin-like domain of Alp11 tubulin-folding cofactor B. Alp11, also known as tubulin-folding cofactor B, is one of at least three proteins required for the proper folding of tubulins prior to their incorporation into microtubules. These cofactors are necessary for the biogenesis of microtubules and for cell viability. Alp11 has three domains including an N-terminal ubiquitin-like domain (represented by this CD) which executes the essential function, a central coiled-coil domain necessary for maintenance of cellular alpha-tubulin levels, and a C-terminal CLIP-170 domain is required for efficient binding to alpha-tubulin.
Probab=73.12 E-value=7 Score=34.06 Aligned_cols=52 Identities=17% Similarity=0.195 Sum_probs=37.7
Q ss_pred eecCCCCCHHHHHHHHHhhcccCCceeEEEEEEEEeCCCCCceeeeecchhHHHHH
Q 040989 94 IIVSDDITYKELVDRLYGIVKVDTNEYVITMKSLYKANIPTMPVEIVDDDDVRFFI 149 (700)
Q Consensus 94 I~V~~~~ty~~l~~~l~~~l~ID~~~~~l~~k~~~~~~~~~~pi~I~dD~Dv~~ml 149 (700)
+.+|..||..+|+.+|+..+|+++..++|.+ |... ...+..+.||....-+.
T Consensus 17 kr~~~~~Tv~~lK~kl~~~~G~~~~~mrL~l---~~~~-~~~~~~l~~d~~~L~~y 68 (84)
T cd01789 17 KKYSRGLTIAELKKKLELVVGTPASSMRLQL---FDGD-DKLVSKLDDDDALLGSY 68 (84)
T ss_pred EecCCCCcHHHHHHHHHHHHCCCccceEEEE---EcCC-CCeEeecCCCccEeeec
Confidence 5589999999999999999999999886644 5543 23344566666544444
No 232
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=72.71 E-value=4.7 Score=33.43 Aligned_cols=35 Identities=23% Similarity=0.357 Sum_probs=19.6
Q ss_pred eeccCCeEE-EEeecCC--------CceEEEEeccCCCCCCccc
Q 040989 413 VELRNGTDV-IWQIPDS--------PKAVLFLAHGCNGRAVHFW 447 (700)
Q Consensus 413 ~~~~~G~~l-~~~~P~~--------pr~vvv~lHG~~~~~~~~~ 447 (700)
+.+.||--| .+++|.+ +|++||+.||..+++.+|.
T Consensus 17 V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 17 VTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp EE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGGC
T ss_pred EEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHHH
Confidence 457788777 5667652 4899999999998887663
No 233
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=72.48 E-value=30 Score=36.99 Aligned_cols=84 Identities=15% Similarity=0.119 Sum_probs=50.6
Q ss_pred ceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHH-CCcEEEEEcCCC---CcCCCc--ccHHHHHHHHHHHH
Q 040989 430 KAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALS-RGFAIITISSAG---RCWTLG--EERLVVREIIRWWV 503 (700)
Q Consensus 430 r~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~-~GyaV~avd~~g---~~w~~~--~e~~~v~a~l~~~~ 503 (700)
+| ++++||.+..+.++. + ..+++.+.+ -|..|++++-.+ +.|-.+ .++..+...+. ..
T Consensus 24 ~P-~ii~HGigd~c~~~~-----------~---~~~~q~l~~~~g~~v~~leig~g~~~s~l~pl~~Qv~~~ce~v~-~m 87 (296)
T KOG2541|consen 24 VP-VIVWHGIGDSCSSLS-----------M---ANLTQLLEELPGSPVYCLEIGDGIKDSSLMPLWEQVDVACEKVK-QM 87 (296)
T ss_pred CC-EEEEeccCcccccch-----------H---HHHHHHHHhCCCCeeEEEEecCCcchhhhccHHHHHHHHHHHHh-cc
Confidence 44 567899999986631 1 234444444 488888888654 333222 23333333333 11
Q ss_pred HHcCCCCCCEEEEecChhHHHHHHHhhcc
Q 040989 504 ERHKLEKLPLVALGASSGGYFVSALAKGL 532 (700)
Q Consensus 504 ~~~~l~~~pl~l~G~S~GG~~a~~la~~~ 532 (700)
.++ ..=..++|.|+||-++-.|+...
T Consensus 88 ~~l---sqGynivg~SQGglv~Raliq~c 113 (296)
T KOG2541|consen 88 PEL---SQGYNIVGYSQGGLVARALIQFC 113 (296)
T ss_pred hhc---cCceEEEEEccccHHHHHHHHhC
Confidence 222 23468999999999999998874
No 234
>PLN02633 palmitoyl protein thioesterase family protein
Probab=71.87 E-value=30 Score=37.73 Aligned_cols=87 Identities=10% Similarity=0.122 Sum_probs=49.5
Q ss_pred CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHC-CcEEEEEcCCCC---cCCC--cccHHHHHHHHHH
Q 040989 428 SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSR-GFAIITISSAGR---CWTL--GEERLVVREIIRW 501 (700)
Q Consensus 428 ~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~-GyaV~avd~~g~---~w~~--~~e~~~v~a~l~~ 501 (700)
.+.| ||+.||.|.++.+- |+ ..+++.+... |.-|..+.-.+. +|-. .++++.+...|..
T Consensus 24 ~~~P-~ViwHG~GD~c~~~-----------g~---~~~~~l~~~~~g~~~~~i~ig~~~~~s~~~~~~~Qve~vce~l~~ 88 (314)
T PLN02633 24 VSVP-FIMLHGIGTQCSDA-----------TN---ANFTQLLTNLSGSPGFCLEIGNGVGDSWLMPLTQQAEIACEKVKQ 88 (314)
T ss_pred CCCC-eEEecCCCcccCCc-----------hH---HHHHHHHHhCCCCceEEEEECCCccccceeCHHHHHHHHHHHHhh
Confidence 3455 56679999886431 22 2344444342 566666654332 2321 2333444433433
Q ss_pred HHHHcCCCCCCEEEEecChhHHHHHHHhhccC
Q 040989 502 WVERHKLEKLPLVALGASSGGYFVSALAKGLR 533 (700)
Q Consensus 502 ~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~ 533 (700)
..++ . .=+-++|+|+||-++=.+..+.+
T Consensus 89 -~~~l--~-~G~naIGfSQGGlflRa~ierc~ 116 (314)
T PLN02633 89 -MKEL--S-QGYNIVGRSQGNLVARGLIEFCD 116 (314)
T ss_pred -chhh--h-CcEEEEEEccchHHHHHHHHHCC
Confidence 2233 2 23899999999999999988864
No 235
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=71.53 E-value=11 Score=42.72 Aligned_cols=62 Identities=10% Similarity=-0.040 Sum_probs=42.6
Q ss_pred HHHHHHHHHCCcEEEEEcCCC--------CcCCCcccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhcc
Q 040989 463 RLLVLHALSRGFAIITISSAG--------RCWTLGEERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGL 532 (700)
Q Consensus 463 ~~~~~~~~~~GyaV~avd~~g--------~~w~~~~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~ 532 (700)
+++++.|++ |+-|+.+|-.. +.|++..-+. .+..+++.. +.++-++|.++||-+++..++.+
T Consensus 120 RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~~f~ldDYi~----~l~~~i~~~---G~~v~l~GvCqgG~~~laa~Al~ 189 (406)
T TIGR01849 120 RSTVEALLP-DHDVYITDWVNARMVPLSAGKFDLEDYID----YLIEFIRFL---GPDIHVIAVCQPAVPVLAAVALM 189 (406)
T ss_pred HHHHHHHhC-CCcEEEEeCCCCCCCchhcCCCCHHHHHH----HHHHHHHHh---CCCCcEEEEchhhHHHHHHHHHH
Confidence 678999999 99999999653 3344443332 333333443 33489999999999987666654
No 236
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=69.89 E-value=31 Score=39.80 Aligned_cols=96 Identities=16% Similarity=0.246 Sum_probs=71.3
Q ss_pred CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCC--CCcCCCc-------------ccH
Q 040989 428 SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSA--GRCWTLG-------------EER 492 (700)
Q Consensus 428 ~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~--g~~w~~~-------------~e~ 492 (700)
.+.+-+|+.=|+.+...+.|-. .+ .......|.+.|-.|+.+++| |..+-.. .-+
T Consensus 83 ~~~gPiFLmIGGEgp~~~~wv~---------~~-~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QAL 152 (514)
T KOG2182|consen 83 KPGGPIFLMIGGEGPESDKWVG---------NE-NLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQAL 152 (514)
T ss_pred cCCCceEEEEcCCCCCCCCccc---------cC-cchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHH
Confidence 4566677777887777666632 12 234788899999999999998 5444221 224
Q ss_pred HHHHHHHHHHHHHcCCCC-CCEEEEecChhHHHHHHHhhccC
Q 040989 493 LVVREIIRWWVERHKLEK-LPLVALGASSGGYFVSALAKGLR 533 (700)
Q Consensus 493 ~~v~a~l~~~~~~~~l~~-~pl~l~G~S~GG~~a~~la~~~~ 533 (700)
.|++..|+.+..+++... -|.+.||-|-=|++++.+=.++|
T Consensus 153 aDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yP 194 (514)
T KOG2182|consen 153 ADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYP 194 (514)
T ss_pred HHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCc
Confidence 788888888888886644 49999999999999998888877
No 237
>PLN02606 palmitoyl-protein thioesterase
Probab=69.59 E-value=34 Score=37.25 Aligned_cols=86 Identities=14% Similarity=0.138 Sum_probs=47.6
Q ss_pred CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHH--CCcEEEEEcCCCCcC-CC----cccHHHHHHHHH
Q 040989 428 SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALS--RGFAIITISSAGRCW-TL----GEERLVVREIIR 500 (700)
Q Consensus 428 ~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~--~GyaV~avd~~g~~w-~~----~~e~~~v~a~l~ 500 (700)
.+.| ||+.||.|.++.+ + .+.....+++ .|.-+..+.-.+.-+ ++ .++++.+...|.
T Consensus 25 ~~~P-vViwHGlgD~~~~--------------~-~~~~~~~~i~~~~~~pg~~v~ig~~~~~s~~~~~~~Qv~~vce~l~ 88 (306)
T PLN02606 25 LSVP-FVLFHGFGGECSN--------------G-KVSNLTQFLINHSGYPGTCVEIGNGVQDSLFMPLRQQASIACEKIK 88 (306)
T ss_pred CCCC-EEEECCCCcccCC--------------c-hHHHHHHHHHhCCCCCeEEEEECCCcccccccCHHHHHHHHHHHHh
Confidence 4455 4567999977533 1 1333334444 477666654221111 22 233333333333
Q ss_pred HHHHHcCCCCCCEEEEecChhHHHHHHHhhccC
Q 040989 501 WWVERHKLEKLPLVALGASSGGYFVSALAKGLR 533 (700)
Q Consensus 501 ~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~ 533 (700)
. ..++ . .=+-++|+|+||-+.=.++.+.+
T Consensus 89 ~-~~~L--~-~G~naIGfSQGglflRa~ierc~ 117 (306)
T PLN02606 89 Q-MKEL--S-EGYNIVAESQGNLVARGLIEFCD 117 (306)
T ss_pred c-chhh--c-CceEEEEEcchhHHHHHHHHHCC
Confidence 3 2222 2 24889999999999999998864
No 238
>PF11470 TUG-UBL1: GLUT4 regulating protein TUG; InterPro: IPR021569 TUG is a GLUT4 regulating protein and functions to retain membrane vesicles containing GLUT4 intracellularly. TUG releases the GLUT4 containing vesicles to the cellular exocytic machinery in response to insulin stimulation which allows translocation to the plasma membrane []. TUG has an N-terminal ubiquitin-like domain (UBL1) which in similar proteins appears to participate in protein-protein interactions []. The region does have a area of negative electrostatic potential and increased backbone motility which leads to suggestions of a potential protein-protein interaction site []. ; PDB: 2AL3_A.
Probab=68.78 E-value=6.4 Score=32.95 Aligned_cols=35 Identities=11% Similarity=0.193 Sum_probs=24.8
Q ss_pred CCeeceeecCCCCCHHHHHHHHHhhcccCCceeEE
Q 040989 88 GGQTKGIIVSDDITYKELVDRLYGIVKVDTNEYVI 122 (700)
Q Consensus 88 G~~~kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l 122 (700)
+++..-|-|...++..+++...|.+|++|+..+.|
T Consensus 5 ~~rr~~vkvtp~~~l~~VL~eac~k~~l~~~~~~L 39 (65)
T PF11470_consen 5 NFRRFKVKVTPNTTLNQVLEEACKKFGLDPSSYDL 39 (65)
T ss_dssp TS-EEEE---TTSBHHHHHHHHHHHTT--GGG-EE
T ss_pred CCcEEEEEECCCCCHHHHHHHHHHHcCCCccceEE
Confidence 45678899999999999999999999999997744
No 239
>cd06403 PB1_Par6 The PB1 domain is an essential part of Par6 protein which in complex with Par3 and aPKC proteins is crucial for establishment of apical-basal polarity of animal cells. The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants. The
Probab=68.59 E-value=26 Score=30.57 Aligned_cols=53 Identities=8% Similarity=0.091 Sum_probs=42.3
Q ss_pred eeecCCCCCHHHHHHHHHhhcccCCceeEEEEEEEEeCCCCCceeeeecchhHHHHHh
Q 040989 93 GIIVSDDITYKELVDRLYGIVKVDTNEYVITMKSLYKANIPTMPVEIVDDDDVRFFIQ 150 (700)
Q Consensus 93 gI~V~~~~ty~~l~~~l~~~l~ID~~~~~l~~k~~~~~~~~~~pi~I~dD~Dv~~ml~ 150 (700)
+++..+..+|++|.+.|-+..+|....+ .+.|. .+ --.++||.||+.+.+=+.
T Consensus 15 sl~r~~~~~f~ef~~ll~~lH~l~~~~f--~i~Y~-D~--~gDLLPInNDdNf~kAls 67 (80)
T cd06403 15 SLDRNKPGKFEDFYKLLEHLHHIPNVDF--LIGYT-DP--HGDLLPINNDDNFLKALS 67 (80)
T ss_pred EeccccCcCHHHHHHHHHHHhCCCCCcE--EEEEe-CC--CCCEecccCcHHHHHHHH
Confidence 4555567999999999999999998544 55652 23 578999999999999987
No 240
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=68.44 E-value=13 Score=38.46 Aligned_cols=60 Identities=17% Similarity=0.276 Sum_probs=36.9
Q ss_pred CcEEEEEcCCCCcCC--------CcccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhcc
Q 040989 473 GFAIITISSAGRCWT--------LGEERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGL 532 (700)
Q Consensus 473 GyaV~avd~~g~~w~--------~~~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~ 532 (700)
|+.+..+++....|- ++.-...-.+.+...+...--.+.|++++|.|+|+.++.....++
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHH
Confidence 566677777654443 222222223333333333212678999999999999999887664
No 241
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=65.68 E-value=1.7 Score=44.49 Aligned_cols=158 Identities=15% Similarity=0.049 Sum_probs=81.7
Q ss_pred CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCc----CC----CcccHHHHHHHHH
Q 040989 429 PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRC----WT----LGEERLVVREIIR 500 (700)
Q Consensus 429 pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~----w~----~~~e~~~v~a~l~ 500 (700)
....++..||+........+. ........++.++..++++.. +. +..+...+-+.+.
T Consensus 87 ~~~~~~~~~g~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 151 (299)
T COG1073 87 FGESGGDPRGLADSEGYAEDF---------------SAAVLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALLA 151 (299)
T ss_pred ccccccccccccCcccccccc---------------chhheeeeccccccHHHHHHhhhcCcceEEEEEeeccchHHHhh
Confidence 345678888885554322211 123345566666666654311 10 1122223333333
Q ss_pred HHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCe-EEEEEecCCCCCC---CCC--CCCCCeEEEccCCChhHHHH
Q 040989 501 WWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSS-IALMIAEGLFDQM---DIP--EDYPPTLFVHMPKDSYRQRK 572 (700)
Q Consensus 501 ~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~g-lv~~I~~G~~~~~---~~~--~~yPP~lf~hm~~D~~~~~~ 572 (700)
++.. .+....+.++|.|+||..+........ ... .-.++..+.+... ... ....+ ....+..|...
T Consensus 152 ~~~~--~~~~~~~~~~g~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~--- 225 (299)
T COG1073 152 WGPT--RLDASRIVVWGESLGGALALLLLGANPELARELIDYLITPGGFAPLPAPEAPLDTLPLR-AVLLLLLDPFD--- 225 (299)
T ss_pred cchh--HHHhhcccceeeccCceeeccccccchHHHHhhhhhhccCCCCCCCCcccccccccccc-hhhhccCcchh---
Confidence 3322 124568899999999999988654311 001 1112233333221 111 11112 22234445443
Q ss_pred HHHHHHHHHhCCCeeeEEEecCCcCCccccccCCCCCCHHHHHHHHHHHHH
Q 040989 573 IGEFLVVLRNKGIDVAEIECMEFPLSRNFFTDRIPGLEQANSTKLFELFQE 623 (700)
Q Consensus 573 i~~~~~~L~~~gvp~~~i~~~~~~v~p~~f~~rdp~I~~~~S~~l~~al~~ 623 (700)
.+..++. .|+..++. .+|..|+...+..+|.+++.
T Consensus 226 ---~~~~i~~--~P~l~~~G-----------~~D~~vp~~~~~~~~~~~~~ 260 (299)
T COG1073 226 ---DAEKISP--RPVLLVHG-----------ERDEVVPLRDAEDLYEAARE 260 (299)
T ss_pred ---hHhhcCC--cceEEEec-----------CCCcccchhhhHHHHhhhcc
Confidence 2222222 78888877 68999999999999999986
No 242
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=63.83 E-value=8.7 Score=40.84 Aligned_cols=99 Identities=19% Similarity=0.208 Sum_probs=61.3
Q ss_pred CCeEEEEeecCCCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCC--C-CcC-----CC
Q 040989 417 NGTDVIWQIPDSPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSA--G-RCW-----TL 488 (700)
Q Consensus 417 ~G~~l~~~~P~~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~--g-~~w-----~~ 488 (700)
.-..+.|.+|..+.++-+.+-|-|.+. |+.+ ..+..-++++|.|.+.+..+ | +-. +.
T Consensus 100 ~~A~~~~liPQK~~~KOG~~a~tgdh~--y~rr-------------~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~ 164 (371)
T KOG1551|consen 100 RTARVAWLIPQKMADLCLSWALTGDHV--YTRR-------------LVLSKPINKREIATMVLEKPFYGQRVPEEQIIHM 164 (371)
T ss_pred cceeeeeecccCcCCeeEEEeecCCce--eEee-------------eeecCchhhhcchheeeecccccccCCHHHHHHH
Confidence 345678999998888888887777664 3322 12445578999999988754 2 111 10
Q ss_pred ---cccH-HHHHHHHHHHHH------HcCCCCCCEEEEecChhHHHHHHHhhcc
Q 040989 489 ---GEER-LVVREIIRWWVE------RHKLEKLPLVALGASSGGYFVSALAKGL 532 (700)
Q Consensus 489 ---~~e~-~~v~a~l~~~~~------~~~l~~~pl~l~G~S~GG~~a~~la~~~ 532 (700)
-+|. .--+|.|+.... ..|+ -|+-+.|.||||.+|..++..+
T Consensus 165 Le~vtDlf~mG~A~I~E~~~lf~Ws~~~g~--g~~~~~g~Smgg~~a~~vgS~~ 216 (371)
T KOG1551|consen 165 LEYVTDLFKMGRATIQEFVKLFTWSSADGL--GNLNLVGRSMGGDIANQVGSLH 216 (371)
T ss_pred HHHHHHHHHhhHHHHHHHHHhcccccccCc--ccceeeeeecccHHHHhhcccC
Confidence 0111 111333443332 2232 3788999999999999998843
No 243
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=63.17 E-value=18 Score=38.91 Aligned_cols=104 Identities=16% Similarity=0.204 Sum_probs=62.4
Q ss_pred EEee-cCCCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCCCcCC---Cccc-----H
Q 040989 422 IWQI-PDSPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAGRCWT---LGEE-----R 492 (700)
Q Consensus 422 ~~~~-P~~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g~~w~---~~~e-----~ 492 (700)
+.|- |...||+++-+|=-|-+...-|..--.| | ..+.....|.++-+|.+|+--+ ++.+ .
T Consensus 14 ~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~-------~----~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~y~yPsm 82 (283)
T PF03096_consen 14 TVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNF-------E----DMQEILQNFCIYHIDAPGQEEGAATLPEGYQYPSM 82 (283)
T ss_dssp EEESS--TTS-EEEEE--TT--HHHHCHHHHCS-------H----HHHHHHTTSEEEEEE-TTTSTT-----TT-----H
T ss_pred EEEecCCCCCceEEEeccccccchHHHHHHhcc-------h----hHHHHhhceEEEEEeCCCCCCCcccccccccccCH
Confidence 3443 3345899999997776654411110001 1 2456678999999999985332 2322 3
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCeEE
Q 040989 493 LVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSSIA 538 (700)
Q Consensus 493 ~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~glv 538 (700)
+.+++.+..+.+.+++. -++.+|.-+|+++-+++|..+| +.|++
T Consensus 83 d~LAe~l~~Vl~~f~lk--~vIg~GvGAGAnIL~rfAl~~p~~V~GLi 128 (283)
T PF03096_consen 83 DQLAEMLPEVLDHFGLK--SVIGFGVGAGANILARFALKHPERVLGLI 128 (283)
T ss_dssp HHHHCTHHHHHHHHT-----EEEEEETHHHHHHHHHHHHSGGGEEEEE
T ss_pred HHHHHHHHHHHHhCCcc--EEEEEeeccchhhhhhccccCccceeEEE
Confidence 66777777888888764 5999999999999999999975 44544
No 244
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=62.94 E-value=25 Score=35.01 Aligned_cols=57 Identities=16% Similarity=0.168 Sum_probs=36.4
Q ss_pred CcEEEEEcCCCCcCC--C----cccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhc
Q 040989 473 GFAIITISSAGRCWT--L----GEERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKG 531 (700)
Q Consensus 473 GyaV~avd~~g~~w~--~----~~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~ 531 (700)
...+..++|.-..+. + ..-..++...|+...++- ++.+++|+|.|+|+.++..+...
T Consensus 39 ~~~~~~V~YpA~~~~~~y~~S~~~G~~~~~~~i~~~~~~C--P~~kivl~GYSQGA~V~~~~~~~ 101 (179)
T PF01083_consen 39 SVAVQGVEYPASLGPNSYGDSVAAGVANLVRLIEEYAARC--PNTKIVLAGYSQGAMVVGDALSG 101 (179)
T ss_dssp EEEEEE--S---SCGGSCHHHHHHHHHHHHHHHHHHHHHS--TTSEEEEEEETHHHHHHHHHHHH
T ss_pred eeEEEecCCCCCCCcccccccHHHHHHHHHHHHHHHHHhC--CCCCEEEEecccccHHHHHHHHh
Confidence 366666777643332 2 122355666666666665 57899999999999999999876
No 245
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=62.37 E-value=18 Score=34.49 Aligned_cols=50 Identities=12% Similarity=0.293 Sum_probs=27.4
Q ss_pred ceEEEEeccCCCCCCcccc-CCCCCCC-------CCCCchHHHHHHHHHHCCcEEEEE
Q 040989 430 KAVLFLAHGCNGRAVHFWD-RSPNCPN-------CIGLPEERLLVLHALSRGFAIITI 479 (700)
Q Consensus 430 r~vvv~lHG~~~~~~~~~~-~s~~c~~-------c~glpe~~~~~~~~~~~GyaV~av 479 (700)
.-.++|.|||-++...-.- ..|.-.. -.-.--+....++|.+.|+.|+.+
T Consensus 57 y~~viFvHGCFWh~H~c~~a~vPksnt~fWleKi~kNveRD~r~~~~L~~~GwrvlvV 114 (150)
T COG3727 57 YRCVIFVHGCFWHGHHCYLAKVPKSNTEFWLEKIGKNVERDERDIKRLQQLGWRVLVV 114 (150)
T ss_pred ceEEEEEeeeeccCCccccccCCCcchHHHHHHHhhhhhhhHHHHHHHHHcCCeEEEE
Confidence 4689999999555433211 0000000 000111335678899999999986
No 246
>cd00196 UBQ Ubiquitin-like proteins. Ubiquitin homologs; Includes ubiquitin and ubiquitin-like proteins. Ubiquitin-mediated proteolysis is part of the regulated turnover of proteins required for controlling cell cycle progression. Other family members are protein modifiers that perform a wide range of functions. Ubiquitination usually results in a covalent bond between the C-terminus of ubiquitin and the epsilon-amino group of a substrate lysine. The three-step mechanism requires an activating enzyme (E1) that forms a thiol ester with the C-terminal carboxy group, a conjugating enzyme (E2) that transiently carries the activated ubiquitin molecule as a thiol ester, and a ligase (E3) that transfers the activated ubiquitin from the E2 to the substrate lysine residue. In poly-ubiquitination, ubiquitin itself is the substrate.
Probab=62.08 E-value=12 Score=27.97 Aligned_cols=39 Identities=15% Similarity=0.285 Sum_probs=32.7
Q ss_pred eCCeeceeecCCCCCHHHHHHHHHhhcccCCceeEEEEE
Q 040989 87 SGGQTKGIIVSDDITYKELVDRLYGIVKVDTNEYVITMK 125 (700)
Q Consensus 87 ~G~~~kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l~~k 125 (700)
.++..+-+.++..+|..+|+..|++++++++..+.|.+.
T Consensus 5 ~~~~~~~~~~~~~~tv~~l~~~i~~~~~~~~~~~~l~~~ 43 (69)
T cd00196 5 NDGKTVELLVPSGTTVADLKEKLAKKLGLPPEQQRLLVN 43 (69)
T ss_pred cCCCEEEEEcCCCCcHHHHHHHHHHHHCcChHHeEEEEC
Confidence 356667788899999999999999999999998866444
No 247
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=60.22 E-value=9.3 Score=40.60 Aligned_cols=43 Identities=21% Similarity=0.285 Sum_probs=31.6
Q ss_pred HHHHHHH-HHHHHcCCCCCCEEEEecChhHHHHHHHhhccC--cCe
Q 040989 494 VVREIIR-WWVERHKLEKLPLVALGASSGGYFVSALAKGLR--FSS 536 (700)
Q Consensus 494 ~v~a~l~-~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~--~~g 536 (700)
.+..-+. ++-+++..+..|..++|||+||-|++..-.+.| |+.
T Consensus 119 fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~ 164 (264)
T COG2819 119 FLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGR 164 (264)
T ss_pred HHHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhce
Confidence 3333333 333557888899999999999999999888874 544
No 248
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=59.01 E-value=9.7 Score=38.03 Aligned_cols=40 Identities=23% Similarity=0.228 Sum_probs=34.9
Q ss_pred CCCCeEEEccCCChhH-HHHHHHHHHHHHhCCCeeeEEEec
Q 040989 554 DYPPTLFVHMPKDSYR-QRKIGEFLVVLRNKGIDVAEIECM 593 (700)
Q Consensus 554 ~yPP~lf~hm~~D~~~-~~~i~~~~~~L~~~gvp~~~i~~~ 593 (700)
..||+|++|+.+|... ..+..+..+.|++.|++++.+..+
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p 183 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFP 183 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEET
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcC
Confidence 6789999999999864 678888899999999999888775
No 249
>cd06402 PB1_p62 The PB1 domain is an essential part of p62 scaffold protein (alias sequestosome 1,SQSTM) involved in cell signaling, receptor internalization, and protein turnover. The PB1 domain is a modular domain mediating specific protein-protein interaction which play roles in many critical cell processes. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants.
Probab=57.46 E-value=57 Score=28.96 Aligned_cols=57 Identities=11% Similarity=0.014 Sum_probs=42.6
Q ss_pred ceeecCCCCCHHHHHHHHHhhcccCCceeEEEEEEEEeCCCCCceeeeecchhHHHHHhhc
Q 040989 92 KGIIVSDDITYKELVDRLYGIVKVDTNEYVITMKSLYKANIPTMPVEIVDDDDVRFFIQEN 152 (700)
Q Consensus 92 kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l~~k~~~~~~~~~~pi~I~dD~Dv~~ml~~~ 152 (700)
-.++.+..+||.+|.++|-++|..-.. ..+.|+|+= ..-.||+|++|.+|+.=+...
T Consensus 19 f~l~~~~~~s~~~L~~~V~~~f~~l~~-~~ftlky~D---eeGDlvtIssdeEL~~A~~~~ 75 (87)
T cd06402 19 FAIDEDVSTSYEYLVEKVAAVFPSLRG-KNFQLFWKD---EEGDLVAFSSDEELVMALGSL 75 (87)
T ss_pred EEecCCCCcCHHHHHHHHHHHccccCC-CcEEEEEEC---CCCCEEeecCHHHHHHHHHcC
Confidence 367778899999999999999944432 334666532 246899999999999877643
No 250
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=57.29 E-value=28 Score=30.23 Aligned_cols=44 Identities=20% Similarity=0.252 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHcCCCC-CCEEEEecChhHHHHHHHhhccCcCe
Q 040989 493 LVVREIIRWWVERHKLEK-LPLVALGASSGGYFVSALAKGLRFSS 536 (700)
Q Consensus 493 ~~v~a~l~~~~~~~~l~~-~pl~l~G~S~GG~~a~~la~~~~~~g 536 (700)
..|+..|+++.++..+.+ ..+.++|.|+|=++|+++++.+...+
T Consensus 21 ~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aFg~gA 65 (78)
T PF12242_consen 21 RNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAFGAGA 65 (78)
T ss_dssp HHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHhcCCC
Confidence 567778888887655544 78899999999999999998875444
No 251
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=54.81 E-value=19 Score=40.12 Aligned_cols=65 Identities=22% Similarity=0.229 Sum_probs=41.1
Q ss_pred CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEE-EcCCCCcCCCcccHHHHHHHHHHHHHH
Q 040989 428 SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIIT-ISSAGRCWTLGEERLVVREIIRWWVER 505 (700)
Q Consensus 428 ~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~a-vd~~g~~w~~~~e~~~v~a~l~~~~~~ 505 (700)
.|.+.||+||||.|++..+-+. .-+...++..+.++|+-.+. +-|.|=.-+..+|+ ..++.+.+.
T Consensus 169 a~~~~vvLLH~CcHNPTG~D~t---------~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa----~~lR~~a~~ 234 (396)
T COG1448 169 APEGSVVLLHGCCHNPTGIDPT---------EEQWQELADLIKERGLIPFFDIAYQGFADGLEEDA----YALRLFAEV 234 (396)
T ss_pred CCCCCEEEEecCCCCCCCCCCC---------HHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHH----HHHHHHHHh
Confidence 3789999999999999876331 13345788888899987765 33444222234443 344455554
No 252
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=54.01 E-value=16 Score=41.71 Aligned_cols=37 Identities=19% Similarity=0.169 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhc
Q 040989 493 LVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKG 531 (700)
Q Consensus 493 ~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~ 531 (700)
..++..|+...+.+| +.|++++||||||-+++.+-..
T Consensus 166 ~kLK~~iE~~~~~~G--~kkVvlisHSMG~l~~lyFl~w 202 (473)
T KOG2369|consen 166 SKLKKKIETMYKLNG--GKKVVLISHSMGGLYVLYFLKW 202 (473)
T ss_pred HHHHHHHHHHHHHcC--CCceEEEecCCccHHHHHHHhc
Confidence 566777777766663 5899999999999999887543
No 253
>PF03283 PAE: Pectinacetylesterase
Probab=53.67 E-value=17 Score=40.39 Aligned_cols=38 Identities=18% Similarity=0.213 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHcCC-CCCCEEEEecChhHHHHHHHhhc
Q 040989 493 LVVREIIRWWVERHKL-EKLPLVALGASSGGYFVSALAKG 531 (700)
Q Consensus 493 ~~v~a~l~~~~~~~~l-~~~pl~l~G~S~GG~~a~~la~~ 531 (700)
..++++++++.+. |+ ....++|.|.|+||.-|..-+-.
T Consensus 138 ~i~~avl~~l~~~-gl~~a~~vlltG~SAGG~g~~~~~d~ 176 (361)
T PF03283_consen 138 RILRAVLDDLLSN-GLPNAKQVLLTGCSAGGLGAILHADY 176 (361)
T ss_pred HHHHHHHHHHHHh-cCcccceEEEeccChHHHHHHHHHHH
Confidence 5688999999887 45 45789999999999988876544
No 254
>PF08452 DNAP_B_exo_N: DNA polymerase family B exonuclease domain, N-terminal; InterPro: IPR013660 This domain is found in viral DNA polymerases to the N terminus of DNA polymerase family B exonuclease domains (IPR006133 from INTERPRO). ; GO: 0003887 DNA-directed DNA polymerase activity
Probab=51.71 E-value=4.7 Score=26.19 Aligned_cols=11 Identities=27% Similarity=0.770 Sum_probs=9.5
Q ss_pred hhhhhhcCcCC
Q 040989 682 QIFKWFLPIGS 692 (700)
Q Consensus 682 ~~l~w~e~~g~ 692 (700)
.|++|||+.|.
T Consensus 4 kCiNWFE~~ge 14 (22)
T PF08452_consen 4 KCINWFESRGE 14 (22)
T ss_pred EEeehhhhCCc
Confidence 48999999985
No 255
>smart00774 WRKY DNA binding domain. The WRKY domain is a DNA binding domain found in one or two copies in a superfamily of plant transcription factors. These transcription factors are involved in the regulation of various physiological programs that are unique to plants, including pathogen defense, senescence and trichome development. The domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger-like motif. It binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core is essential for function and WRKY binding.
Probab=50.28 E-value=29 Score=28.59 Aligned_cols=37 Identities=14% Similarity=0.223 Sum_probs=28.7
Q ss_pred EEEEEecC-CCCccEEEEEeeCCCCeEEEEEecCCccc
Q 040989 325 RFEVVCAD-TNCKWRLRATKTAEDEYFEIRRFSNIHIC 361 (700)
Q Consensus 325 r~~~~C~~-~gC~Wri~A~~~~~~~~f~I~~~~~~HtC 361 (700)
|--.+|.. .+|+=+-+..+..+.....+.+|.+.|||
T Consensus 22 RsYYrCt~~~~C~a~K~Vq~~~~d~~~~~vtY~g~H~h 59 (59)
T smart00774 22 RSYYRCTYSQGCPAKKQVQRSDDDPSVVEVTYEGEHTH 59 (59)
T ss_pred ceEEeccccCCCCCcccEEEECCCCCEEEEEEeeEeCC
Confidence 34469998 89999888877765455556789999998
No 256
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=50.04 E-value=78 Score=36.98 Aligned_cols=87 Identities=15% Similarity=0.026 Sum_probs=57.0
Q ss_pred ceEEEEeccCCCCCC--ccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEEcCCC-CcCCCcccHHH----HHHHHHHH
Q 040989 430 KAVLFLAHGCNGRAV--HFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITISSAG-RCWTLGEERLV----VREIIRWW 502 (700)
Q Consensus 430 r~vvv~lHG~~~~~~--~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~avd~~g-~~w~~~~e~~~----v~a~l~~~ 502 (700)
+|+||+-.--||.++ +|-+ -+.+-.+++.|..||.+.-.- -+-+ ....| .++.++.+
T Consensus 69 rP~vViDPRAGHGpGIGGFK~--------------dSevG~AL~~GHPvYFV~F~p~P~pg--QTl~DV~~ae~~Fv~~V 132 (581)
T PF11339_consen 69 RPFVVIDPRAGHGPGIGGFKP--------------DSEVGVALRAGHPVYFVGFFPEPEPG--QTLEDVMRAEAAFVEEV 132 (581)
T ss_pred CCeEEeCCCCCCCCCccCCCc--------------ccHHHHHHHcCCCeEEEEecCCCCCC--CcHHHHHHHHHHHHHHH
Confidence 788888765544432 2222 235677889999999987532 1111 12233 34555666
Q ss_pred HHHcCCCCCCEEEEecChhHHHHHHHhhccC
Q 040989 503 VERHKLEKLPLVALGASSGGYFVSALAKGLR 533 (700)
Q Consensus 503 ~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~ 533 (700)
.+.+.-.+ +.+++|--+||.++++||+..|
T Consensus 133 ~~~hp~~~-kp~liGnCQgGWa~~mlAA~~P 162 (581)
T PF11339_consen 133 AERHPDAP-KPNLIGNCQGGWAAMMLAALRP 162 (581)
T ss_pred HHhCCCCC-CceEEeccHHHHHHHHHHhcCc
Confidence 77775444 7899999999999999999864
No 257
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=49.39 E-value=97 Score=32.51 Aligned_cols=64 Identities=9% Similarity=0.026 Sum_probs=49.1
Q ss_pred HHHHHHHCCcEEEEEcCCC--CcCC---CcccHHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhh
Q 040989 465 LVLHALSRGFAIITISSAG--RCWT---LGEERLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAK 530 (700)
Q Consensus 465 ~~~~~~~~GyaV~avd~~g--~~w~---~~~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~ 530 (700)
++..+.+.+|..+.+.-+. .+|+ ...|.+++..+++++... + ....++|+|||-|.-=.+.+-+
T Consensus 58 L~~~lde~~wslVq~q~~Ssy~G~Gt~slk~D~edl~~l~~Hi~~~-~-fSt~vVL~GhSTGcQdi~yYlT 126 (299)
T KOG4840|consen 58 LNRYLDENSWSLVQPQLRSSYNGYGTFSLKDDVEDLKCLLEHIQLC-G-FSTDVVLVGHSTGCQDIMYYLT 126 (299)
T ss_pred HHHHHhhccceeeeeeccccccccccccccccHHHHHHHHHHhhcc-C-cccceEEEecCccchHHHHHHH
Confidence 7889999999999987664 3454 457888999999876543 2 2348999999999987777653
No 258
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=48.85 E-value=19 Score=39.37 Aligned_cols=43 Identities=23% Similarity=0.284 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccCcCe
Q 040989 493 LVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLRFSS 536 (700)
Q Consensus 493 ~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~~~g 536 (700)
..+..+.+.++..+. ++..||+||+|-|++.|-.||.-.+-.|
T Consensus 105 ~nI~~AYrFL~~~ye-pGD~Iy~FGFSRGAf~aRVlagmir~vG 147 (423)
T COG3673 105 QNIREAYRFLIFNYE-PGDEIYAFGFSRGAFSARVLAGMIRHVG 147 (423)
T ss_pred HHHHHHHHHHHHhcC-CCCeEEEeeccchhHHHHHHHHHHHHhh
Confidence 456666667777765 7899999999999999988887654334
No 259
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=47.58 E-value=55 Score=33.83 Aligned_cols=93 Identities=15% Similarity=0.258 Sum_probs=56.7
Q ss_pred ceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHH-HHCCcEEEE-EcCCCCcCCCcccHHHHHHHHHHHHHHcC
Q 040989 430 KAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHA-LSRGFAIIT-ISSAGRCWTLGEERLVVREIIRWWVERHK 507 (700)
Q Consensus 430 r~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~-~~~GyaV~a-vd~~g~~w~~~~e~~~v~a~l~~~~~~~~ 507 (700)
+-+||+|-|+|-+..-+. +| +..+|-|+. .||+.-.... + + ..
T Consensus 11 ~~LilfF~GWg~d~~~f~--------------------hL~~~~~~D~l~~yDYr~l~~d~--~----------~-~~-- 55 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFS--------------------HLILPENYDVLICYDYRDLDFDF--D----------L-SG-- 55 (213)
T ss_pred CeEEEEEecCCCChHHhh--------------------hccCCCCccEEEEecCccccccc--c----------c-cc--
Confidence 469999999998754332 22 223454444 5777533211 1 1 22
Q ss_pred CCCCCEEEEecChhHHHHHHHhhccCcCeEEEEEecCCCCCCCCCCCCCCeEEE
Q 040989 508 LEKLPLVALGASSGGYFVSALAKGLRFSSIALMIAEGLFDQMDIPEDYPPTLFV 561 (700)
Q Consensus 508 l~~~pl~l~G~S~GG~~a~~la~~~~~~glv~~I~~G~~~~~~~~~~yPP~lf~ 561 (700)
-..++|++-|||=.+|..+-...++.-.+ ...|....++-....||.+|-
T Consensus 56 --y~~i~lvAWSmGVw~A~~~l~~~~~~~ai--AINGT~~Pid~~~GIpp~iF~ 105 (213)
T PF04301_consen 56 --YREIYLVAWSMGVWAANRVLQGIPFKRAI--AINGTPYPIDDEYGIPPAIFA 105 (213)
T ss_pred --CceEEEEEEeHHHHHHHHHhccCCcceeE--EEECCCCCcCCCCCCCHHHHH
Confidence 35899999999999998886666665422 234554444445667787763
No 260
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=47.47 E-value=65 Score=37.31 Aligned_cols=55 Identities=15% Similarity=0.199 Sum_probs=35.5
Q ss_pred CCcEEEEEcCCCCcCCC-----ccc------HHHHHHHHHHHHH---HcCCCCCCEEEEecChhHHHHH
Q 040989 472 RGFAIITISSAGRCWTL-----GEE------RLVVREIIRWWVE---RHKLEKLPLVALGASSGGYFVS 526 (700)
Q Consensus 472 ~GyaV~avd~~g~~w~~-----~~e------~~~v~a~l~~~~~---~~~l~~~pl~l~G~S~GG~~a~ 526 (700)
..--|+.+.||=..+++ ..| .-|-.-+++|+.+ .+|-++.++-|||.|+|++-+.
T Consensus 165 envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~ 233 (601)
T KOG4389|consen 165 ENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGLLDQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVV 233 (601)
T ss_pred ccEEEEEeeeeeccceEEecCCCCCCCCccchHHHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhh
Confidence 34455667787544432 122 2344556667754 3588899999999999987654
No 261
>cd01812 BAG1_N Ubiquitin-like domain of BAG1. BAG1_N N-terminal ubiquitin-like (Ubl) domain of the BAG1 protein. This domain occurs together with the BAG domain and is closely related to the Ubl domain of a family of deubiquitinases that includes Rpn11, UBP6 (USP14), USP7 (HAUSP).
Probab=46.30 E-value=26 Score=28.73 Aligned_cols=34 Identities=18% Similarity=0.379 Sum_probs=29.9
Q ss_pred CeeceeecCCCCCHHHHHHHHHhhcccCCceeEE
Q 040989 89 GQTKGIIVSDDITYKELVDRLYGIVKVDTNEYVI 122 (700)
Q Consensus 89 ~~~kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l 122 (700)
++...+.++...|-.+|+.+|....++++...+|
T Consensus 9 g~~~~i~v~~~~tv~~lK~~i~~~~gi~~~~q~L 42 (71)
T cd01812 9 GESHDLSISSQATFGDLKKMLAPVTGVEPRDQKL 42 (71)
T ss_pred CEEEEEEECCCCcHHHHHHHHHHhhCCChHHeEE
Confidence 5566789999999999999999999999987644
No 262
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=43.97 E-value=1e+02 Score=33.92 Aligned_cols=111 Identities=18% Similarity=0.366 Sum_probs=63.5
Q ss_pred cCCeEEEEee----cC--CCceEEEEeccC-CCCCCccccCCCCCCC-CCCCchHHHHHHHHHHCCcEEEEEcCC-CCcC
Q 040989 416 RNGTDVIWQI----PD--SPKAVLFLAHGC-NGRAVHFWDRSPNCPN-CIGLPEERLLVLHALSRGFAIITISSA-GRCW 486 (700)
Q Consensus 416 ~~G~~l~~~~----P~--~pr~vvv~lHG~-~~~~~~~~~~s~~c~~-c~glpe~~~~~~~~~~~GyaV~avd~~-g~~w 486 (700)
..+...||.+ ++ ..+|+.+++.|. |.+...|-.-....|. -.|-|.+.--.+ + -.++.+|.+ |..+
T Consensus 11 r~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk---~--adllfvDnPVGaGf 85 (414)
T KOG1283|consen 11 RTGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLK---D--ADLLFVDNPVGAGF 85 (414)
T ss_pred ecCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhh---h--ccEEEecCCCcCce
Confidence 3455556554 43 358999999999 6565555211001111 122232211111 1 246677764 5555
Q ss_pred CC--c---------ccHHHHHHHHHHHHHHc-CCCCCCEEEEecChhHHHHHHHhhc
Q 040989 487 TL--G---------EERLVVREIIRWWVERH-KLEKLPLVALGASSGGYFVSALAKG 531 (700)
Q Consensus 487 ~~--~---------~e~~~v~a~l~~~~~~~-~l~~~pl~l~G~S~GG~~a~~la~~ 531 (700)
++ + .-+.|+..+++.+...| .+...|+|+|=.|-||=||..+|..
T Consensus 86 SyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~ 142 (414)
T KOG1283|consen 86 SYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALE 142 (414)
T ss_pred eeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhh
Confidence 43 1 11245555555554443 5577899999999999999999875
No 263
>cd06405 PB1_Mekk2_3 The PB1 domain is present in the two mitogen-activated protein kinase kinases MEKK2 and MEKK3 which are two members of the signaling kinase cascade involved in angiogenesis and early cardiovascular development. The PB1 domain of MEKK2 (and/or MEKK3) interacts with the PB1 domain of another member of the kinase cascade Map2k5. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, f
Probab=42.48 E-value=1.4e+02 Score=25.86 Aligned_cols=63 Identities=14% Similarity=0.294 Sum_probs=48.3
Q ss_pred EEEeCCeeceeecCCCCCHHHHHHHHHhhcccCCceeEEEEEEEEeCCCCCceeeeecchhHHHHHhhccCCC
Q 040989 84 YLYSGGQTKGIIVSDDITYKELVDRLYGIVKVDTNEYVITMKSLYKANIPTMPVEIVDDDDVRFFIQENAAHP 156 (700)
Q Consensus 84 y~Y~G~~~kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l~~k~~~~~~~~~~pi~I~dD~Dv~~ml~~~~~~~ 156 (700)
++|+ |+.+-|-+++-..|+|+..++-..||-- + .|- |- | +--.|||.+-.|+.+=++..+.+|
T Consensus 5 fE~~-gEKRIi~f~RPvkf~dl~~kv~~afGq~---m--dl~--yt-n-~eL~iPl~~Q~DLDkAie~ld~s~ 67 (79)
T cd06405 5 FEHN-GEKRIIQFPRPVKFKDLQQKVTTAFGQP---M--DLH--YT-N-NELLIPLKNQEDLDRAIELLDRSP 67 (79)
T ss_pred EEec-CceEEEecCCCccHHHHHHHHHHHhCCe---e--eEE--Ee-c-ccEEEeccCHHHHHHHHHHHccCc
Confidence 4565 5678899999999999999999999842 2 233 42 2 237789999999999998776554
No 264
>smart00314 RA Ras association (RalGDS/AF-6) domain. RasGTP effectors (in cases of AF6, canoe and RalGDS); putative RasGTP effectors in other cases. Kalhammer et al. have shown that not all RA domains bind RasGTP. Predicted structure similar to that determined, and that of the RasGTP-binding domain of Raf kinase. Predicted RA domains in PLC210 and nore1 found to bind RasGTP. Included outliers (Grb7, Grb14, adenylyl cyclases etc.)
Probab=41.70 E-value=81 Score=27.27 Aligned_cols=30 Identities=20% Similarity=0.348 Sum_probs=27.0
Q ss_pred CeeceeecCCCCCHHHHHHHHHhhcccCCc
Q 040989 89 GQTKGIIVSDDITYKELVDRLYGIVKVDTN 118 (700)
Q Consensus 89 ~~~kgI~V~~~~ty~~l~~~l~~~l~ID~~ 118 (700)
+..+.|.|++++|-.+++..+.++|+++.+
T Consensus 15 ~~~kti~v~~~tTa~~Vi~~~l~k~~l~~~ 44 (90)
T smart00314 15 GTYKTLRVSSRTTARDVIQQLLEKFHLTDD 44 (90)
T ss_pred CcEEEEEECCCCCHHHHHHHHHHHhCCCCC
Confidence 445899999999999999999999999864
No 265
>cd06409 PB1_MUG70 The MUG70 protein is a product of the meiotically up-regulated gene 70 which has a role in meiosis and harbors a PB1 domain. The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domains depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic amino acid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is
Probab=41.39 E-value=83 Score=27.89 Aligned_cols=61 Identities=11% Similarity=-0.011 Sum_probs=44.8
Q ss_pred ceeecCCCCCHHHHHHHHHhhcccCCc-eeEEEEEEEEeCCCCCceeeeecchhHHHHHhhccCC
Q 040989 92 KGIIVSDDITYKELVDRLYGIVKVDTN-EYVITMKSLYKANIPTMPVEIVDDDDVRFFIQENAAH 155 (700)
Q Consensus 92 kgI~V~~~~ty~~l~~~l~~~l~ID~~-~~~l~~k~~~~~~~~~~pi~I~dD~Dv~~ml~~~~~~ 155 (700)
+-+.+....++.+|++.|.++|++|.. ...+.|+|.= ..-.-+-|+.|.||.-=+.+....
T Consensus 13 hRf~~~~s~~~~~L~~~I~~Rl~~d~~~~~~~~L~YlD---DEgD~VllT~D~DL~e~v~iar~~ 74 (86)
T cd06409 13 HRFRLRPSESLEELRTLISQRLGDDDFETHLYALSYVD---DEGDIVLITSDSDLVAAVLVARSA 74 (86)
T ss_pred EEEEecCCCCHHHHHHHHHHHhCCccccCCcccEEEEc---CCCCEEEEeccchHHHHHHHHHHc
Confidence 334445688999999999999999973 2344667622 345667889999999888876544
No 266
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=41.20 E-value=56 Score=31.06 Aligned_cols=23 Identities=26% Similarity=0.543 Sum_probs=19.3
Q ss_pred cCCCceEEEEeccCCCCCCcccc
Q 040989 426 PDSPKAVLFLAHGCNGRAVHFWD 448 (700)
Q Consensus 426 P~~pr~vvv~lHG~~~~~~~~~~ 448 (700)
|.+.||+|+-|||+.|.+.+|..
T Consensus 48 ~~p~KpLVlSfHG~tGtGKn~v~ 70 (127)
T PF06309_consen 48 PNPRKPLVLSFHGWTGTGKNFVS 70 (127)
T ss_pred CCCCCCEEEEeecCCCCcHHHHH
Confidence 55568999999999999988753
No 267
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=40.76 E-value=36 Score=36.26 Aligned_cols=39 Identities=21% Similarity=0.264 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhcc
Q 040989 493 LVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGL 532 (700)
Q Consensus 493 ~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~ 532 (700)
..+..+..++.+.+ -++..||+||+|-|++.|=.+|...
T Consensus 75 ~~I~~ay~~l~~~~-~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 75 ARIRDAYRFLSKNY-EPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred HHHHHHHHHHHhcc-CCcceEEEEecCccHHHHHHHHHHH
Confidence 55677777777777 3788999999999999998887643
No 268
>PF11543 UN_NPL4: Nuclear pore localisation protein NPL4; InterPro: IPR024682 Npl4, along with Ufd1, forms the heterodimer adaptor complex UN, which is involved in the recruitment of p97, an AAA ATPase, for tasks involving the ubiquitin pathway. Npl4 has a N-terminal ubiquitin-like domain which has within its structure a beta-grasp fold with a helical insert []. This entry represents the ubiquitin-like domain.; PDB: 2PJH_A 1WF9_A.
Probab=40.46 E-value=38 Score=29.38 Aligned_cols=36 Identities=19% Similarity=0.216 Sum_probs=25.4
Q ss_pred EEcCCeeEEEeCCeeceeecCCCCCHHHHHHHHHhhcccCCcee
Q 040989 77 FCSPSGYYLYSGGQTKGIIVSDDITYKELVDRLYGIVKVDTNEY 120 (700)
Q Consensus 77 v~~~~G~y~Y~G~~~kgI~V~~~~ty~~l~~~l~~~l~ID~~~~ 120 (700)
||.++|.+ -|.++..-|+.+|+.+|.+.|+++....
T Consensus 9 vrS~dG~~--------Rie~~~~~t~~~L~~kI~~~l~~~~~~~ 44 (80)
T PF11543_consen 9 VRSKDGMK--------RIEVSPSSTLSDLKEKISEQLSIPDSSQ 44 (80)
T ss_dssp EE-SSEEE--------EEEE-TTSBHHHHHHHHHHHS---TTT-
T ss_pred EECCCCCE--------EEEcCCcccHHHHHHHHHHHcCCCCcce
Confidence 46677874 5678899999999999999999998755
No 269
>cd01818 TIAM1_RBD Ubiquitin domain of Tiam1 guanine nucleotide exchange factor. Tiam1 (T lymphoma invasion and metastasis 1) a guanine nucleotide exchange factor that activates Rac, is an important regulator of Rho GTPase functions in tumor cells including regulation of cell shape and invasiveness in epithelial cells and fibroblasts. TIAM1 has an RBD (Ras-binding domain) similar to that of Raf kinase as well as PH (pleckstrin homology), PDZ, and RhoGEF domains.
Probab=39.98 E-value=81 Score=27.35 Aligned_cols=47 Identities=15% Similarity=0.285 Sum_probs=38.0
Q ss_pred EEEcCCeeEEEeCCeeceeecCCCCCHHHHHHHHHhhcccCCceeEEEEEEEEe
Q 040989 76 WFCSPSGYYLYSGGQTKGIIVSDDITYKELVDRLYGIVKVDTNEYVITMKSLYK 129 (700)
Q Consensus 76 ~v~~~~G~y~Y~G~~~kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l~~k~~~~ 129 (700)
||.-+||.. .-+.|...||..|++.-.|++=++||..+-|.+|..-.
T Consensus 3 ~V~lPn~~~-------~~v~vrp~~tv~dvLe~aCk~~~ldp~eh~Lrlk~~~~ 49 (77)
T cd01818 3 WVCLPDNQP-------VLTYLRPGMSVEDFLESACKRKQLDPMEHYLRLKFLRM 49 (77)
T ss_pred EEECCCCce-------EEEEECCCCCHHHHHHHHHHhcCCChhHheeEEEEEec
Confidence 455555553 45678899999999999999999999999999996433
No 270
>PF00788 RA: Ras association (RalGDS/AF-6) domain; InterPro: IPR000159 Proteins with this domain are mostly RasGTP effectors and include guanine-nucleotide releasing factor in mammals []. This factor stimulates the dissociation of GDP from the Ras-related RALA and RALB GTPases, which allows GTP binding and activation of the GTPases. It interacts and acts as an effector molecule for R-ras, K-Ras and Rap []. The domain is also present in a number of other proteins among them the sexual differentiation protein in yeast that is essential for mating and meiosis and yeast adenylate cyclase. These proteins contain repeated leucine-rich (LRR) segments.; GO: 0007165 signal transduction; PDB: 3EC8_A 2C5L_D 2BYF_A 2CS4_A 3KH0_A 2B3A_A 1RAX_A 2RGF_A 1WGR_A 1WXA_A ....
Probab=39.88 E-value=43 Score=28.73 Aligned_cols=55 Identities=18% Similarity=0.156 Sum_probs=37.4
Q ss_pred eceeecCCCCCHHHHHHHHHhhccc--CCceeEEEEEEEEeCCCCCceeeeecchhHHHHH
Q 040989 91 TKGIIVSDDITYKELVDRLYGIVKV--DTNEYVITMKSLYKANIPTMPVEIVDDDDVRFFI 149 (700)
Q Consensus 91 ~kgI~V~~~~ty~~l~~~l~~~l~I--D~~~~~l~~k~~~~~~~~~~pi~I~dD~Dv~~ml 149 (700)
.+.|.|+..+|-.+++..++++|++ |+..+.|. .+.. ..-..-.|.+|+-...-.
T Consensus 18 ~k~i~v~~~tTa~evi~~~l~k~~l~~~~~~y~L~---~~~~-~~~~er~L~~~E~pl~i~ 74 (93)
T PF00788_consen 18 YKTIKVSSSTTAREVIEMALEKFGLAEDPSDYCLV---EVEE-SGGEERPLDDDECPLQIQ 74 (93)
T ss_dssp EEEEEEETTSBHHHHHHHHHHHTTTSSSGGGEEEE---EEEC-TTTEEEEETTTSBHHHHH
T ss_pred EEEEEECCCCCHHHHHHHHHHHhCCCCCCCCEEEE---EEEc-CCCEEEEcCCCCchHHHH
Confidence 6899999999999999999999999 55555442 1222 123334666555554444
No 271
>cd01796 DDI1_N DNA damage inducible protein 1 ubiquitin-like domain. DDI1_N DDI1 (DNA damage inducible protein 1) has an amino-terminal ubiquitin-like domain, an retroviral protease-like (RVP-like) domain, and a UBA (ubiquitin-associated) domain. This CD represents the amino-terminal ubiquitin-like domain of DDI1.
Probab=39.58 E-value=39 Score=28.24 Aligned_cols=35 Identities=9% Similarity=0.054 Sum_probs=30.6
Q ss_pred CCeeceeecCCCCCHHHHHHHHHhhcccCCceeEE
Q 040989 88 GGQTKGIIVSDDITYKELVDRLYGIVKVDTNEYVI 122 (700)
Q Consensus 88 G~~~kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l 122 (700)
+++...+.|+..+|..+|+.+|....||+....+|
T Consensus 8 ~g~~~~l~v~~~~TV~~lK~~I~~~~gip~~~q~L 42 (71)
T cd01796 8 SETTFSLDVDPDLELENFKALCEAESGIPASQQQL 42 (71)
T ss_pred CCCEEEEEECCcCCHHHHHHHHHHHhCCCHHHeEE
Confidence 56667899999999999999999999999987644
No 272
>PF14201 DUF4318: Domain of unknown function (DUF4318)
Probab=38.99 E-value=41 Score=29.01 Aligned_cols=33 Identities=12% Similarity=0.179 Sum_probs=28.8
Q ss_pred cCcccCCHHHHHHHHHHHhhhccceEEEeeecC
Q 040989 291 CGKTFTSKKDLIKKLKLGAAKKNFAFKVSKSTK 323 (700)
Q Consensus 291 vG~~F~~k~~~r~al~~~aI~~~f~~~~~kS~~ 323 (700)
.--.||+.+++..||.+|+.+++-.+++++-++
T Consensus 10 d~~~yPs~e~i~~aIE~YC~~~~~~l~Fisr~~ 42 (74)
T PF14201_consen 10 DSPKYPSKEEICEAIEKYCIKNGESLEFISRDK 42 (74)
T ss_pred cCCCCCCHHHHHHHHHHHHHHcCCceEEEecCC
Confidence 335699999999999999999999999987665
No 273
>PF04684 BAF1_ABF1: BAF1 / ABF1 chromatin reorganising factor; InterPro: IPR006774 ABF1 is a sequence-specific DNA binding protein involved in transcription activation, gene silencing and initiation of DNA replication. ABF1 is known to remodel chromatin, and it is proposed that it mediates its effects on transcription and gene expression by modifying local chromatin architecture []. These functions require a conserved stretch of 20 amino acids in the C-terminal region of ABF1 (amino acids 639 to 662 Saccharomyces cerevisiae (P14164 from SWISSPROT)) []. The N-terminal two thirds of the protein are necessary for DNA binding, and the N terminus (amino acids 9 to 91 in S. cerevisiae) is thought to contain a novel zinc-finger motif which may stabilise the protein structure [].; GO: 0003677 DNA binding, 0006338 chromatin remodeling, 0005634 nucleus
Probab=38.72 E-value=66 Score=36.73 Aligned_cols=59 Identities=10% Similarity=0.238 Sum_probs=50.2
Q ss_pred ccccCcccCCHHHHHHHHHHHhhhccceEEEeeecC-cEEEEEecCCCCccEEEEEeeCC
Q 040989 288 DIVCGKTFTSKKDLIKKLKLGAAKKNFAFKVSKSTK-DRFEVVCADTNCKWRLRATKTAE 346 (700)
Q Consensus 288 ~l~vG~~F~~k~~~r~al~~~aI~~~f~~~~~kS~~-~r~~~~C~~~gC~Wri~A~~~~~ 346 (700)
....+..|+..++--.+|.-|-+-.+--+..+-|-+ +.|+.-|.-+.||++|..+-.+.
T Consensus 21 ~~~~~~~f~tl~~wy~v~ndyefq~rcpiilknsh~nkhftfachlk~c~fkillsy~g~ 80 (496)
T PF04684_consen 21 QSAQARKFPTLEAWYNVINDYEFQSRCPIILKNSHRNKHFTFACHLKNCPFKILLSYCGN 80 (496)
T ss_pred ccccccCCCcHHHHHHHHhhhhhhhcCceeecccccccceEEEeeccCCCceeeeeeccc
Confidence 345678899999999999999998888888887765 78999999999999998875543
No 274
>smart00213 UBQ Ubiquitin homologues. Ubiquitin-mediated proteolysis is involved in the regulated turnover of proteins required for controlling cell cycle progression
Probab=37.72 E-value=53 Score=25.82 Aligned_cols=32 Identities=16% Similarity=0.182 Sum_probs=27.3
Q ss_pred eceeecCCCCCHHHHHHHHHhhcccCCceeEE
Q 040989 91 TKGIIVSDDITYKELVDRLYGIVKVDTNEYVI 122 (700)
Q Consensus 91 ~kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l 122 (700)
...+.|+...|..+|+.+|...+++.+...+|
T Consensus 11 ~~~~~v~~~~tv~~lk~~i~~~~~~~~~~~~L 42 (64)
T smart00213 11 TITLEVKPSDTVSELKEKIAELTGIPVEQQRL 42 (64)
T ss_pred eEEEEECCCCcHHHHHHHHHHHHCCCHHHEEE
Confidence 34688999999999999999999999886533
No 275
>PF12436 USP7_ICP0_bdg: ICP0-binding domain of Ubiquitin-specific protease 7; InterPro: IPR024729 This domain is found in eukaryotes, and is approximately 40 amino acids in length. It is found in proteins of the peptidase C19 family, which contains contains ubiquitinyl hydrolases like ubiquitin-specific protease 7 (USP7). USP7 regulates the turnover of p53 [].; PDB: 2KVR_A 2YLM_A.
Probab=37.64 E-value=19 Score=37.94 Aligned_cols=31 Identities=19% Similarity=0.365 Sum_probs=24.4
Q ss_pred ceeecCCCCCHHHHHHHHHhhcccCCceeEE
Q 040989 92 KGIIVSDDITYKELVDRLYGIVKVDTNEYVI 122 (700)
Q Consensus 92 kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l 122 (700)
=-+.++++|||++|..+|.+.+++||....|
T Consensus 192 F~l~ls~~~tY~~la~~Va~~l~~dP~~lr~ 222 (249)
T PF12436_consen 192 FTLWLSKKMTYDQLAEKVAEHLNVDPEHLRF 222 (249)
T ss_dssp EEEEEETT--HHHHHHHHHHHHTS-GGGEEE
T ss_pred EEEEECCCCCHHHHHHHHHHHHCCChHHEEE
Confidence 3466789999999999999999999997765
No 276
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=37.27 E-value=3.7e+02 Score=29.42 Aligned_cols=129 Identities=17% Similarity=0.231 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHHcCC--CCCCEEEEecChhHHHHHHHhhccCcCeEEEEEecCCCCCCCCCCCCCCeEEEccCCChhHH
Q 040989 493 LVVREIIRWWVERHKL--EKLPLVALGASSGGYFVSALAKGLRFSSIALMIAEGLFDQMDIPEDYPPTLFVHMPKDSYRQ 570 (700)
Q Consensus 493 ~~v~a~l~~~~~~~~l--~~~pl~l~G~S~GG~~a~~la~~~~~~glv~~I~~G~~~~~~~~~~yPP~lf~hm~~D~~~~ 570 (700)
..|..-|++..++.++ .+.++.+.|.|+|=++|.++++.+++.|-.+ |+|-... ++.--|. ...-+..
T Consensus 22 ~nV~~QI~y~k~~gp~~ngPKkVLviGaSsGyGLa~RIsaaFG~gAdTi----GVffE~p-gte~~~g-----tagwyn~ 91 (398)
T COG3007 22 ANVLQQIDYVKAAGPIKNGPKKVLVIGASSGYGLAARISAAFGPGADTI----GVFFERP-GTERKPG-----TAGWYNN 91 (398)
T ss_pred HHHHHHHHHHHhcCCccCCCceEEEEecCCcccHHHHHHHHhCCCCcee----eEEeecC-CccCCCc-----chhhhHH
Confidence 4567777888887655 3578899999999999999999987554221 2211100 1111111 1111222
Q ss_pred HHHHHHHHHHHhCCCeeeEEEecCCcCCccccccCCCCCCHHHHHHHHHHHH-HcccccC-----CCCcccCCchh-HHH
Q 040989 571 RKIGEFLVVLRNKGIDVAEIECMEFPLSRNFFTDRIPGLEQANSTKLFELFQ-EKGFIDE-----NGYMRSDGRRT-RWK 643 (700)
Q Consensus 571 ~~i~~~~~~L~~~gvp~~~i~~~~~~v~p~~f~~rdp~I~~~~S~~l~~al~-~~g~ld~-----~g~l~~d~r~~-~w~ 643 (700)
.. ..+..+++|.-+.-+..+ ..+.+.-++..++.+ .+|-+|- ..=++.+|++- -|+
T Consensus 92 ~~---f~~~A~~kGlyAksingD--------------aFS~e~k~kvIe~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~ 154 (398)
T COG3007 92 AA---FKKFAKQKGLYAKSINGD--------------AFSDEMKQKVIEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFR 154 (398)
T ss_pred HH---HHHHHHhcCceeeecccc--------------hhhHHHHHHHHHHHHHhhccccEEEEeccCccccCCCcchhhH
Confidence 12 223334566655444332 246677777777777 5777775 22234555554 466
Q ss_pred HHHHh
Q 040989 644 EALRE 648 (700)
Q Consensus 644 ~~l~~ 648 (700)
.+|+.
T Consensus 155 SalKp 159 (398)
T COG3007 155 SALKP 159 (398)
T ss_pred hhhcc
Confidence 66653
No 277
>PF09757 Arb2: Arb2 domain; InterPro: IPR019154 The fission yeast Argonaute siRNA chaperone (ARC) complex contains the Argonaute protein Ago1 and two previously uncharacterised proteins, Arb1 and Arb2, both of which are required for histone H3 Lys9 (H3-K9) methylation, heterochromatin assembly and siRNA generation []. This entry represents a region found in both Arb2 and the Hda1 protein. ; PDB: 2VQV_A 2VQO_A 2VQJ_A 2VQQ_B 2VQM_A 2VQW_G.
Probab=36.06 E-value=12 Score=37.20 Aligned_cols=56 Identities=20% Similarity=0.431 Sum_probs=0.0
Q ss_pred CCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHH-HHHHHHHCCcEEEEEcCCCCcCC
Q 040989 428 SPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERL-LVLHALSRGFAIITISSAGRCWT 487 (700)
Q Consensus 428 ~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~-~~~~~~~~GyaV~avd~~g~~w~ 487 (700)
.++.+||++||.+. .|.+...+..+.-.-.-+. +++.|.++||+|+-+......|.
T Consensus 97 ~~~~llViih~~g~----~wa~~~~~~~~l~~gs~~~~~i~~A~~~~~gVI~~N~~~~~~~ 153 (178)
T PF09757_consen 97 TAKKLLVIIHGSGV----IWARRLIINGGLDSGSQIPQYIKWALKEGYGVIDLNPNQNFWE 153 (178)
T ss_dssp -------------------------------------------------------------
T ss_pred cccccccccccccc----ccccccccccccccccccccccccccccccccccccccccccc
Confidence 45779999999776 4443222222221111223 67899999999999998665554
No 278
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=36.03 E-value=90 Score=31.26 Aligned_cols=104 Identities=20% Similarity=0.188 Sum_probs=59.0
Q ss_pred cCCCceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHH--------HCCcEEEE-EcC--C-CCcCCC--ccc
Q 040989 426 PDSPKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHAL--------SRGFAIIT-ISS--A-GRCWTL--GEE 491 (700)
Q Consensus 426 P~~pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~--------~~GyaV~a-vd~--~-g~~w~~--~~e 491 (700)
|...+-+.+++.|.+-+-.++...- +-+...+...+. ...-||++ +.| + +..+.- +.-
T Consensus 15 ~d~A~~Vav~VPG~~t~~~~~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~ 86 (177)
T PF06259_consen 15 PDTADHVAVLVPGTGTTLDSFLGGM--------DDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGY 86 (177)
T ss_pred cCCcCeeEEEcCCCCCCcccccchh--------HHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchH
Confidence 5556779999999988866554210 001111221111 13455665 233 2 111111 111
Q ss_pred ----HHHHHHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhc--cCcCeEE
Q 040989 492 ----RLVVREIIRWWVERHKLEKLPLVALGASSGGYFVSALAKG--LRFSSIA 538 (700)
Q Consensus 492 ----~~~v~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~--~~~~glv 538 (700)
..++++.++-+...+ -++..+-++|||.|+-++...+.. .+.+.++
T Consensus 87 A~~ga~~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv 138 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVV 138 (177)
T ss_pred HHHHHHHHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhCCCCcccEE
Confidence 255666666666666 467799999999999998877766 4555655
No 279
>cd01806 Nedd8 Nebb8-like ubiquitin protein. Nedd8 (also known as Rub1) has a single conserved ubiquitin-like domain that is part of a protein modification pathway similar to that of ubiquitin. Nedd8 modifies a family of molecular scaffold proteins called cullins that are responsible for assembling the ROC1/Rbx1 RING-based E3 ubiquitin ligases, of which several play a direct role in tumorigenesis.
Probab=32.32 E-value=67 Score=26.51 Aligned_cols=47 Identities=11% Similarity=0.189 Sum_probs=34.5
Q ss_pred ceeecCCCCCHHHHHHHHHhhcccCCceeEEEEEEEEeCCCCCceeeeecchhHHHH
Q 040989 92 KGIIVSDDITYKELVDRLYGIVKVDTNEYVITMKSLYKANIPTMPVEIVDDDDVRFF 148 (700)
Q Consensus 92 kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l~~k~~~~~~~~~~pi~I~dD~Dv~~m 148 (700)
..+.|+...|-.+|+.+|+...++.+...+| .|... .+.||..+..|
T Consensus 13 ~~~~v~~~~tv~~lK~~i~~~~g~~~~~qrL----~~~g~------~L~d~~tl~~~ 59 (76)
T cd01806 13 IEIDIEPTDKVERIKERVEEKEGIPPQQQRL----IYSGK------QMNDDKTAADY 59 (76)
T ss_pred EEEEECCCCCHHHHHHHHhHhhCCChhhEEE----EECCe------EccCCCCHHHc
Confidence 4477899999999999999999999996644 35421 34566555544
No 280
>cd01809 Scythe_N Ubiquitin-like domain of Scythe protein. Scythe protein (also known as Bat3) is an apoptotic regulator that is highly conserved in eukaryotes and contains a ubiquitin-like domain near its N-terminus. Scythe binds reaper, a potent apoptotic inducer, and Scythe/Reaper are thought to signal apoptosis, in part through regulating the folding and activity of apoptotic signaling molecules.
Probab=32.19 E-value=75 Score=25.89 Aligned_cols=34 Identities=21% Similarity=0.312 Sum_probs=28.6
Q ss_pred CeeceeecCCCCCHHHHHHHHHhhcccCCceeEE
Q 040989 89 GQTKGIIVSDDITYKELVDRLYGIVKVDTNEYVI 122 (700)
Q Consensus 89 ~~~kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l 122 (700)
|+..-+.++...|..+|+.+|.+..|+.+...+|
T Consensus 10 g~~~~~~v~~~~tv~~lK~~i~~~~gi~~~~q~L 43 (72)
T cd01809 10 SQTHTFTVEEEITVLDLKEKIAEEVGIPVEQQRL 43 (72)
T ss_pred CCEEEEEECCCCcHHHHHHHHHHHHCcCHHHeEE
Confidence 3445688889999999999999999999886644
No 281
>PF11976 Rad60-SLD: Ubiquitin-2 like Rad60 SUMO-like; InterPro: IPR022617 This entry includes small ubiquitin-related modifier (SUMO) proteins. SUMOs are small proteins that are covalently attached to lysines as post-translational modifications and are used to control multiple cellular process including signal transduction, nuclear transport and DNA replication and repair []. Unlike ubiquitin, they are not involved in protein degradation. This entry also contains the C-terminal Rad60 DNA repair protein SUMO-like domain.; PDB: 3RD2_A 2JXX_A 3RCZ_A 3GOE_A 3A4S_D 3A4R_B 2IO1_D 1U4A_A 2K1F_A 1WZ0_A ....
Probab=32.10 E-value=71 Score=26.31 Aligned_cols=34 Identities=12% Similarity=0.184 Sum_probs=28.2
Q ss_pred CeeceeecCCCCCHHHHHHHHHhhcccCC-ceeEE
Q 040989 89 GQTKGIIVSDDITYKELVDRLYGIVKVDT-NEYVI 122 (700)
Q Consensus 89 ~~~kgI~V~~~~ty~~l~~~l~~~l~ID~-~~~~l 122 (700)
+....+.|.++.+++.|+...|+..++++ +.++|
T Consensus 10 ~~~~~~~v~~~~~~~~l~~~~~~~~~i~~~~~~~l 44 (72)
T PF11976_consen 10 GKEIKFKVKPTTTVSKLIEKYCEKKGIPPEESIRL 44 (72)
T ss_dssp SEEEEEEEETTSCCHHHHHHHHHHHTTTT-TTEEE
T ss_pred CCEEEEEECCCCcHHHHHHHHHHhhCCCccceEEE
Confidence 33456788999999999999999999999 85533
No 282
>cd01768 RA RA (Ras-associating) ubiquitin domain. The RA (Ras-associating) domain is structurally similar to ubiquitin and is present in one or two copies in a number of signalling molecules that bind and regulate a small GTPase called Ras or the Ras-related GTPases, Ral and Rap. RA-containing proteins include RalGDS, AF6, RIN1, RASSF1, SNX27, CYR1, STE50, and phospholipase C epsilon.
Probab=31.75 E-value=88 Score=26.81 Aligned_cols=29 Identities=28% Similarity=0.409 Sum_probs=26.6
Q ss_pred CeeceeecCCCCCHHHHHHHHHhhcccCC
Q 040989 89 GQTKGIIVSDDITYKELVDRLYGIVKVDT 117 (700)
Q Consensus 89 ~~~kgI~V~~~~ty~~l~~~l~~~l~ID~ 117 (700)
+..+.|.|++++|=.+++..+.++|+++.
T Consensus 12 ~~~kti~V~~~~t~~~Vi~~~l~k~~l~~ 40 (87)
T cd01768 12 GTYKTLRVSKDTTAQDVIQQLLKKFGLDD 40 (87)
T ss_pred ccEEEEEECCCCCHHHHHHHHHHHhCCcC
Confidence 44589999999999999999999999994
No 283
>cd01799 Hoil1_N Ubiquitin-like domain of HOIL1. HOIL1_N HOIL-1 (heme-oxidized IRP2 ubiquitin ligase-1) is an E3 ubiquitin-protein ligase that recognizes heme-oxidized IRP2 (iron regulatory protein2) and is thought to affect the turnover of oxidatively damaged proteins. Hoil-1 has an amino-terminal ubiquitin-like domain as well as an RBR signature consisting of two RING finger domains separated by an IBR/DRIL domain.
Probab=31.73 E-value=55 Score=27.92 Aligned_cols=35 Identities=17% Similarity=0.050 Sum_probs=29.8
Q ss_pred CCeeceeecCCCCCHHHHHHHHHhhcccCCceeEE
Q 040989 88 GGQTKGIIVSDDITYKELVDRLYGIVKVDTNEYVI 122 (700)
Q Consensus 88 G~~~kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l 122 (700)
++....+.|+..+|-.+|+.+|..+.||.+....|
T Consensus 11 ~~~t~~l~v~~~~TV~~lK~kI~~~~gip~~~QrL 45 (75)
T cd01799 11 HTVTIWLTVRPDMTVAQLKDKVFLDYGFPPAVQRW 45 (75)
T ss_pred CCCeEEEEECCCCcHHHHHHHHHHHHCcCHHHEEE
Confidence 34455689999999999999999999999987644
No 284
>cd01798 parkin_N amino-terminal ubiquitin-like of parkin protein. parkin_N parkin protein is a RING-type E3 ubiquitin ligase with an amino-terminal ubiquitin-like (Ubl) domain and an RBR signature consisting of two RING finger domains separated by an IBR/DRIL domain. Naturally occurring mutations in parkin are thought to cause the disease AR_JP (autosomal-recessive juvenile parkinsonism). Parkin binds the Rpn10 subunit of 26S proteasomes through its Ubl domain.
Probab=30.11 E-value=60 Score=26.78 Aligned_cols=34 Identities=21% Similarity=0.214 Sum_probs=28.8
Q ss_pred CeeceeecCCCCCHHHHHHHHHhhcccCCceeEE
Q 040989 89 GQTKGIIVSDDITYKELVDRLYGIVKVDTNEYVI 122 (700)
Q Consensus 89 ~~~kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l 122 (700)
|..-.+.|....|..+|+.+|..+.|++....+|
T Consensus 8 g~~~~~~v~~~~tV~~lK~~i~~~~gi~~~~q~L 41 (70)
T cd01798 8 GHTFPVEVDPDTDIKQLKEVVAKRQGVPPDQLRV 41 (70)
T ss_pred CCEEEEEECCCChHHHHHHHHHHHHCCCHHHeEE
Confidence 3445688899999999999999999999987644
No 285
>cd03012 TlpA_like_DipZ_like TlpA-like family, DipZ-like subfamily; composed uncharacterized proteins containing a TlpA-like TRX domain. Some members show domain architectures similar to that of E. coli DipZ protein (also known as DsbD). The only eukaryotic members of the TlpA family belong to this subfamily. TlpA is a disulfide reductase known to have a crucial role in the biogenesis of cytochrome aa3.
Probab=29.54 E-value=1.2e+02 Score=27.67 Aligned_cols=78 Identities=21% Similarity=0.142 Sum_probs=44.8
Q ss_pred ceEEEEeccCCCCCCccccCCCCCCCCCC-CchHHHHHHHHHHCCcEEEEEcCCCCcCCCcccHHHHHHHHHHHHHHcCC
Q 040989 430 KAVLFLAHGCNGRAVHFWDRSPNCPNCIG-LPEERLLVLHALSRGFAIITISSAGRCWTLGEERLVVREIIRWWVERHKL 508 (700)
Q Consensus 430 r~vvv~lHG~~~~~~~~~~~s~~c~~c~g-lpe~~~~~~~~~~~GyaV~avd~~g~~w~~~~e~~~v~a~l~~~~~~~~l 508 (700)
+++||+|. +..||.|.- +|+-..+.+.+.++|+.|++++.... .. ++..+.++.+.+++++
T Consensus 24 k~vvl~F~------------a~~C~~C~~~~p~l~~l~~~~~~~~~~vi~i~~~~~----~~--~~~~~~~~~~~~~~~~ 85 (126)
T cd03012 24 KVVLLDFW------------TYCCINCLHTLPYLTDLEQKYKDDGLVVIGVHSPEF----AF--ERDLANVKSAVLRYGI 85 (126)
T ss_pred CEEEEEEE------------CCCCccHHHHHHHHHHHHHHcCcCCeEEEEeccCcc----cc--ccCHHHHHHHHHHcCC
Confidence 56777764 224888874 45555666667778999999975321 11 1123445566777765
Q ss_pred CCCCEEEEecChhHHHHHHHh
Q 040989 509 EKLPLVALGASSGGYFVSALA 529 (700)
Q Consensus 509 ~~~pl~l~G~S~GG~~a~~la 529 (700)
. -|++. ...+.++..++
T Consensus 86 ~-~p~~~---D~~~~~~~~~~ 102 (126)
T cd03012 86 T-YPVAN---DNDYATWRAYG 102 (126)
T ss_pred C-CCEEE---CCchHHHHHhC
Confidence 3 45443 33445554444
No 286
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=29.46 E-value=1.2e+02 Score=28.47 Aligned_cols=18 Identities=11% Similarity=0.314 Sum_probs=14.3
Q ss_pred HHHHHHHHHHCCcEEEEE
Q 040989 462 ERLLVLHALSRGFAIITI 479 (700)
Q Consensus 462 ~~~~~~~~~~~GyaV~av 479 (700)
+......|.+.|+.|+.+
T Consensus 96 D~~~~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 96 DRRVNSRLQELGWRVLRV 113 (117)
T ss_pred HHHHHHHHHHCcCEEEEE
Confidence 345678888999999976
No 287
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=29.03 E-value=1.1e+02 Score=36.25 Aligned_cols=56 Identities=21% Similarity=0.310 Sum_probs=33.7
Q ss_pred cEEEEEcCCCC--cCC--Cccc------HHHHHHHHHHHHHHcCC-CCCCEEEEecChhHHHHHHHhh
Q 040989 474 FAIITISSAGR--CWT--LGEE------RLVVREIIRWWVERHKL-EKLPLVALGASSGGYFVSALAK 530 (700)
Q Consensus 474 yaV~avd~~g~--~w~--~~~e------~~~v~a~l~~~~~~~~l-~~~pl~l~G~S~GG~~a~~la~ 530 (700)
+.+++++|+.. -|. ++.+ +.....+++.+.+. ++ ++.|++-+||||||.++=.+-.
T Consensus 479 ~Rii~l~Y~Tsit~w~~~~p~e~~r~sl~~Rs~~lleql~~~-~VG~~RPivwI~HSmGGLl~K~lLl 545 (697)
T KOG2029|consen 479 SRIIGLEYTTSITDWRARCPAEAHRRSLAARSNELLEQLQAA-GVGDDRPIVWIGHSMGGLLAKKLLL 545 (697)
T ss_pred ceEEEeecccchhhhcccCcccchhhHHHHHHHHHHHHHHHh-ccCCCCceEEEecccchHHHHHHHH
Confidence 56777777541 221 1222 23344555555443 44 4899999999999988765543
No 288
>cd06399 PB1_P40 The PB1 domain is essential part of the p40 adaptor protein which plays an important role in activating phagocyte NADPH oxidase during phagocytosis. The PB1 domain is a modular domain mediating specific protein-protein interaction which play a role in many critical cell processes , such as osteoclastogenesis, angiogenesis, early cardiovascular development and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domain, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. The PB1 domain of p40 represents a type I PB1 domain which interacts with the PB1 domain of oxidase activator p67 w
Probab=28.95 E-value=1.1e+02 Score=27.24 Aligned_cols=59 Identities=14% Similarity=0.210 Sum_probs=44.9
Q ss_pred CCeeceeecC----CCCCHHHHHHHHHhhcccCCceeEEEEEEEEeCCCCCceeeeecchhHHHHHhhcc
Q 040989 88 GGQTKGIIVS----DDITYKELVDRLYGIVKVDTNEYVITMKSLYKANIPTMPVEIVDDDDVRFFIQENA 153 (700)
Q Consensus 88 G~~~kgI~V~----~~~ty~~l~~~l~~~l~ID~~~~~l~~k~~~~~~~~~~pi~I~dD~Dv~~ml~~~~ 153 (700)
|...+.|.|- ..=+|++|+..+-+.|+.+- |.++|+=. .-.+|-|-||+||.-|++...
T Consensus 12 ~~~~rdi~vee~l~~~P~~kdLl~lmr~~f~~~d----IaLNYrD~---EGDLIRllddeDv~LMV~~~r 74 (92)
T cd06399 12 ISTIRDIAVEEDLSSTPLLKDLLELTRREFQRED----IALNYRDA---EGDLIRLLSDEDVALMVRQSR 74 (92)
T ss_pred CccccceEeecccccCccHHHHHHHHHHHhchhh----eeeeeecC---CCCEEEEcchhhHHHHHHHHh
Confidence 4445666664 55679999999999998873 47776432 567899999999999998654
No 289
>PF03709 OKR_DC_1_N: Orn/Lys/Arg decarboxylase, N-terminal domain; InterPro: IPR005308 This domain has a flavodoxin-like fold, and is termed the "wing" domain because of its position in the overall 3D structure. Ornithine decarboxylase from Lactobacillus 30a (L30a OrnDC, P43099 from SWISSPROT) is representative of the large, pyridoxal-5'-phosphate-dependent decarboxylases that act on lysine, arginine or ornithine. The crystal structure of the L30a OrnDC has been solved to 3.0 A resolution. Six dimers related by C6 symmetry compose the enzymatically active dodecamer (approximately 106 Da). Each monomer of L30a OrnDC can be described in terms of five sequential folding domains. The amino-terminal domain, residues 1 to 107, consists of a five-stranded beta-sheet termed the "wing" domain. Two wing domains of each dimer project inward towards the centre of the dodecamer and contribute to dodecamer stabilisation [].; GO: 0016831 carboxy-lyase activity; PDB: 3Q16_C 3N75_A 1C4K_A 1ORD_A 2VYC_D.
Probab=28.93 E-value=98 Score=28.40 Aligned_cols=55 Identities=22% Similarity=0.249 Sum_probs=39.0
Q ss_pred HHHHHHHHCCcEEEEEcCCC------------CcC--CC-cccHHHHHHHHHHHHHHcCCCCCCEEEEecCh
Q 040989 464 LLVLHALSRGFAIITISSAG------------RCW--TL-GEERLVVREIIRWWVERHKLEKLPLVALGASS 520 (700)
Q Consensus 464 ~~~~~~~~~GyaV~avd~~g------------~~w--~~-~~e~~~v~a~l~~~~~~~~l~~~pl~l~G~S~ 520 (700)
.+...|.++||-|+.+.... .|. +| +.+.....++++.+.++. .++|+||++...
T Consensus 8 ~l~~~L~~~~~~vv~~~~~dd~~~~i~~~~~i~avvi~~d~~~~~~~~~ll~~i~~~~--~~iPVFl~~~~~ 77 (115)
T PF03709_consen 8 ELAEALEQRGREVVDADSTDDALAIIESFTDIAAVVISWDGEEEDEAQELLDKIRERN--FGIPVFLLAERD 77 (115)
T ss_dssp HHHHHHHHTTTEEEEESSHHHHHHHHHCTTTEEEEEEECHHHHHHHHHHHHHHHHHHS--TT-EEEEEESCC
T ss_pred HHHHHHHHCCCEEEEeCChHHHHHHHHhCCCeeEEEEEcccccchhHHHHHHHHHHhC--CCCCEEEEecCC
Confidence 46677777999999998754 122 12 233356778888888887 799999999866
No 290
>cd01807 GDX_N ubiquitin-like domain of GDX. GDX contains an N-terminal ubiquitin-like domain as well as an uncharacterized c-terminal domain. The function of GDX is unknown.
Probab=27.56 E-value=95 Score=25.91 Aligned_cols=51 Identities=18% Similarity=0.277 Sum_probs=37.0
Q ss_pred CCeeceeecCCCCCHHHHHHHHHhhcccCCceeEEEEEEEEeCCCCCceeeeecchhHHHH
Q 040989 88 GGQTKGIIVSDDITYKELVDRLYGIVKVDTNEYVITMKSLYKANIPTMPVEIVDDDDVRFF 148 (700)
Q Consensus 88 G~~~kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l~~k~~~~~~~~~~pi~I~dD~Dv~~m 148 (700)
+|....+.|....|-.+|+.+|+.+.||.+...+| .|.. -++.|+..+..|
T Consensus 9 ~G~~~~l~v~~~~tV~~lK~~i~~~~gi~~~~q~L----~~~G------~~L~d~~~L~~~ 59 (74)
T cd01807 9 QGRECSLQVSEKESVSTLKKLVSEHLNVPEEQQRL----LFKG------KALADDKRLSDY 59 (74)
T ss_pred CCCEEEEEECCCCcHHHHHHHHHHHHCCCHHHeEE----EECC------EECCCCCCHHHC
Confidence 34455688999999999999999999999987644 3543 135566555443
No 291
>cd01803 Ubiquitin Ubiquitin. Ubiquitin (includes Ubq/RPL40e and Ubq/RPS27a fusions as well as homopolymeric multiubiquitin protein chains)
Probab=27.07 E-value=82 Score=25.96 Aligned_cols=33 Identities=9% Similarity=0.088 Sum_probs=28.2
Q ss_pred eeceeecCCCCCHHHHHHHHHhhcccCCceeEE
Q 040989 90 QTKGIIVSDDITYKELVDRLYGIVKVDTNEYVI 122 (700)
Q Consensus 90 ~~kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l 122 (700)
+...+.|+...|-.+|+.+|...+++.+...+|
T Consensus 11 ~~~~~~v~~~~tV~~lK~~i~~~~g~~~~~q~L 43 (76)
T cd01803 11 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 43 (76)
T ss_pred CEEEEEECCcCcHHHHHHHHHHHhCCCHHHeEE
Confidence 344588999999999999999999999886644
No 292
>cd01769 UBL Ubiquitin-like domain of UBL. UBLs function by remodeling the surface of their target proteins, changing their target's half-life, enzymatic activity, protein-protein interactions, subcellular localization or other properties. At least 10 different ubiquitin-like modifications exist in mammals, and attachment of different ubls to a target leads to different biological consequences. Ubl-conjugation cascades are initiated by activating enzymes, which also coordinate the ubls with their downstream pathways.
Probab=26.77 E-value=83 Score=25.04 Aligned_cols=33 Identities=24% Similarity=0.160 Sum_probs=27.7
Q ss_pred eeceeecCCCCCHHHHHHHHHhhcccCCceeEE
Q 040989 90 QTKGIIVSDDITYKELVDRLYGIVKVDTNEYVI 122 (700)
Q Consensus 90 ~~kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l 122 (700)
....+.++..+|..+|+.+|.+.+++++...+|
T Consensus 8 ~~~~~~~~~~~ti~~lK~~i~~~~~~~~~~~~l 40 (69)
T cd01769 8 KTFELEVSPDDTVAELKAKIAAKEGVPPEQQRL 40 (69)
T ss_pred CEEEEEECCCChHHHHHHHHHHHHCcChHHEEE
Confidence 334577889999999999999999999987654
No 293
>cd01760 RBD Ubiquitin-like domain of RBD-like S/T kinases. The ras-binding domain (RBD) of the serine/threonine kinase raf is structurally quite similar to the beta-grasp fold of ubiquitin. A raf-like RBD is also present in RGS12 and other members of a family of GTPase activating proteins and TIAM1, a guanine nucleotide exchange protein.
Probab=26.66 E-value=96 Score=26.48 Aligned_cols=35 Identities=3% Similarity=0.061 Sum_probs=30.3
Q ss_pred eceeecCCCCCHHHHHHHHHhhcccCCceeEEEEE
Q 040989 91 TKGIIVSDDITYKELVDRLYGIVKVDTNEYVITMK 125 (700)
Q Consensus 91 ~kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l~~k 125 (700)
..-+.|...+|..|++.++|++-+|++..+.+.+.
T Consensus 11 ~t~V~vrpg~ti~d~L~~~c~kr~l~~~~~~v~~~ 45 (72)
T cd01760 11 RTVVPVRPGMSVRDVLAKACKKRGLNPECCDVFLL 45 (72)
T ss_pred eEEEEECCCCCHHHHHHHHHHHcCCCHHHEEEEEe
Confidence 35677889999999999999999999999976554
No 294
>smart00455 RBD Raf-like Ras-binding domain.
Probab=25.28 E-value=97 Score=26.15 Aligned_cols=33 Identities=9% Similarity=0.115 Sum_probs=29.1
Q ss_pred ceeecCCCCCHHHHHHHHHhhcccCCceeEEEE
Q 040989 92 KGIIVSDDITYKELVDRLYGIVKVDTNEYVITM 124 (700)
Q Consensus 92 kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l~~ 124 (700)
-.+.+...+|..|.+..+|++.|+++..+.+.+
T Consensus 12 ~~V~vrpg~tl~e~L~~~~~kr~l~~~~~~v~~ 44 (70)
T smart00455 12 TVVKVRPGKTVRDALAKALKKRGLNPECCVVRL 44 (70)
T ss_pred EEEEECCCCCHHHHHHHHHHHcCCCHHHEEEEE
Confidence 567788999999999999999999999886644
No 295
>PF14039 YusW: YusW-like protein
Probab=25.22 E-value=1.1e+02 Score=27.46 Aligned_cols=50 Identities=12% Similarity=0.266 Sum_probs=40.4
Q ss_pred cCCeeEEEeCCe--------eceeecCCCCCHHHHHHHHHhhcccCCceeEEEEEEEEe
Q 040989 79 SPSGYYLYSGGQ--------TKGIIVSDDITYKELVDRLYGIVKVDTNEYVITMKSLYK 129 (700)
Q Consensus 79 ~~~G~y~Y~G~~--------~kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l~~k~~~~ 129 (700)
..+|. .++|.+ ...+.+...|+=.++++.|...|+||+..-+|.|.+.|.
T Consensus 34 ~~~~~-~l~G~eA~~~l~~~l~~L~~~~~t~~~evi~~Vl~~f~Ld~dy~~felev~f~ 91 (92)
T PF14039_consen 34 EFNGV-KLEGDEAFDELEPLLSELSFDSDTSEEEVIDQVLKAFNLDPDYQEFELEVKFE 91 (92)
T ss_pred ccCcc-ccchHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHhCCCccceEEEEEEEec
Confidence 35566 366665 567888999999999999999999999888888877763
No 296
>PF02196 RBD: Raf-like Ras-binding domain; InterPro: IPR003116 This is the Ras-binding domain found in proteins related to Ras. It is found in association with the PE-bind and pkinase domains.; GO: 0005057 receptor signaling protein activity, 0007165 signal transduction; PDB: 1RFA_A 1C1Y_B 3KUD_B 1GUA_B 3KUC_B 2L05_A 3NY5_D 1RRB_A 1WFY_A 1WXM_A.
Probab=25.00 E-value=1.4e+02 Score=25.26 Aligned_cols=33 Identities=6% Similarity=0.077 Sum_probs=26.3
Q ss_pred eceeecCCCCCHHHHHHHHHhhcccCCceeEEE
Q 040989 91 TKGIIVSDDITYKELVDRLYGIVKVDTNEYVIT 123 (700)
Q Consensus 91 ~kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l~ 123 (700)
.-.+.|...+|..|+++++|++-+|++..+.+-
T Consensus 12 ~t~V~vrpg~ti~d~L~~~~~kr~L~~~~~~V~ 44 (71)
T PF02196_consen 12 RTVVQVRPGMTIRDALSKACKKRGLNPECCDVR 44 (71)
T ss_dssp EEEEEE-TTSBHHHHHHHHHHTTT--CCCEEEE
T ss_pred EEEEEEcCCCCHHHHHHHHHHHcCCCHHHEEEE
Confidence 357888999999999999999999999988654
No 297
>KOG3465 consensus Signal recognition particle, subunit Srp9 [Intracellular trafficking, secretion, and vesicular transport]
Probab=24.69 E-value=1.4e+02 Score=26.22 Aligned_cols=29 Identities=14% Similarity=0.141 Sum_probs=26.8
Q ss_pred CHHHHHHHHHhhcccCCceeEEEEEEEEe
Q 040989 101 TYKELVDRLYGIVKVDTNEYVITMKSLYK 129 (700)
Q Consensus 101 ty~~l~~~l~~~l~ID~~~~~l~~k~~~~ 129 (700)
|.+||....-+.+.-||.+++++|||+-+
T Consensus 6 twdEF~~ase~L~~A~P~~~RlvmKYrh~ 34 (86)
T KOG3465|consen 6 TWDEFFTASESLYLANPEKTRLVMKYRHS 34 (86)
T ss_pred eHHHHHHHHHHHHhcCccceEEEEEEecC
Confidence 78999999999999999999999998776
No 298
>cd01805 RAD23_N Ubiquitin-like domain of RAD23. RAD23 belongs to a family of adaptor molecules having affinity for both the proteasome and ubiquitinylated proteins and thought to shuttle these ubiquitinylated proteins to the proteasome for destruction. RAD23 interacts with ubiquitin through its C-terminal ubiquitin-associated domains (UBA) and with the proteasome through its N-terminal ubiquitin-like domain (UBL).
Probab=24.29 E-value=1.3e+02 Score=24.90 Aligned_cols=50 Identities=22% Similarity=0.197 Sum_probs=35.4
Q ss_pred CCeeceeecCCCCCHHHHHHHHHhhccc--CCceeEEEEEEEEeCCCCCceeeeecchhHHH
Q 040989 88 GGQTKGIIVSDDITYKELVDRLYGIVKV--DTNEYVITMKSLYKANIPTMPVEIVDDDDVRF 147 (700)
Q Consensus 88 G~~~kgI~V~~~~ty~~l~~~l~~~l~I--D~~~~~l~~k~~~~~~~~~~pi~I~dD~Dv~~ 147 (700)
+|+...+.++...|-.+|+..|++..++ .+...+| .|... .+.|+..+..
T Consensus 9 ~g~~~~l~v~~~~TV~~lK~~i~~~~~i~~~~~~q~L----~~~G~------~L~d~~~L~~ 60 (77)
T cd01805 9 KQQTFPIEVDPDDTVAELKEKIEEEKGCDYPPEQQKL----IYSGK------ILKDDTTLEE 60 (77)
T ss_pred CCCEEEEEECCCCcHHHHHHHHHHhhCCCCChhHeEE----EECCE------EccCCCCHHH
Confidence 3445678899999999999999999999 6665533 35421 4456655554
No 299
>cd01800 SF3a120_C Ubiquitin-like domain of Mammalian splicing factor SF3a_120. SF3a120_C Mammalian splicing factor SF3a consists of three subunits of 60, 66, and 120 kDa and functions early during pre-mRNA splicing by converting the U2 snRNP to its active form. The 120kDa subunit (SF3a120) has a carboxy-terminal ubiquitin-like domain and two SWAP (suppressor-of-white-apricot) domains, referred to collectively as the SURP module, at its amino-terminus.
Probab=23.49 E-value=1e+02 Score=26.02 Aligned_cols=50 Identities=12% Similarity=0.203 Sum_probs=37.4
Q ss_pred CeeceeecCCCCCHHHHHHHHHhhcccCCceeEEEEEEEEeCCCCCceeeeecchhHHHH
Q 040989 89 GQTKGIIVSDDITYKELVDRLYGIVKVDTNEYVITMKSLYKANIPTMPVEIVDDDDVRFF 148 (700)
Q Consensus 89 ~~~kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l~~k~~~~~~~~~~pi~I~dD~Dv~~m 148 (700)
|+..-+.|+..+|-.+|+.+|....+|.+...+|. |.. ..+.|+..|..|
T Consensus 7 g~~~~l~v~~~~TV~~lK~~i~~~~gip~~~q~L~----~~G------~~L~d~~tL~~~ 56 (76)
T cd01800 7 GQMLNFTLQLSDPVSVLKVKIHEETGMPAGKQKLQ----YEG------IFIKDSNSLAYY 56 (76)
T ss_pred CeEEEEEECCCCcHHHHHHHHHHHHCCCHHHEEEE----ECC------EEcCCCCcHHHc
Confidence 45566889999999999999999999999877553 432 146666666543
No 300
>cd01813 UBP_N UBP ubiquitin processing protease. The UBP (ubiquitin processing protease) domain (also referred to as USP which stands for "ubiquitin-specific protease") is present at in a large family of cysteine proteases that specifically cleave ubiquitin conjugates. This family includes Rpn11, UBP6 (USP14), USP7 (HAUSP). This domain is closely related to the amino-terminal ubiquitin-like domain of BAG1 (Bcl2-associated anthanogene1) protein and is found only in eukaryotes.
Probab=22.77 E-value=1e+02 Score=26.12 Aligned_cols=52 Identities=15% Similarity=0.062 Sum_probs=37.2
Q ss_pred CeeceeecCCCCCHHHHHHHHHhhcccCCceeEEEEEEEEeC-CCCCceeeeecchhHHHH
Q 040989 89 GQTKGIIVSDDITYKELVDRLYGIVKVDTNEYVITMKSLYKA-NIPTMPVEIVDDDDVRFF 148 (700)
Q Consensus 89 ~~~kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l~~k~~~~~-~~~~~pi~I~dD~Dv~~m 148 (700)
+...-++|+...|..+|+.+|++..+|.+..-|| .|+. .. -.+.||..|..|
T Consensus 9 g~~~~v~v~~~~Tv~~lK~~i~~~tgvp~~~QKL----i~~~~~G----k~l~D~~~L~~~ 61 (74)
T cd01813 9 GQEYSVTTLSEDTVLDLKQFIKTLTGVLPERQKL----LGLKVKG----KPAEDDVKISAL 61 (74)
T ss_pred CEEEEEEECCCCCHHHHHHHHHHHHCCCHHHEEE----EeecccC----CcCCCCcCHHHc
Confidence 3444688999999999999999999999996654 3320 11 135677776655
No 301
>PLN03229 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Probab=22.11 E-value=3.8e+02 Score=32.81 Aligned_cols=99 Identities=23% Similarity=0.267 Sum_probs=49.0
Q ss_pred CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEE-EcCCCCcCCCcccHH-HHHHHHHHHHHHc
Q 040989 429 PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIIT-ISSAGRCWTLGEERL-VVREIIRWWVERH 506 (700)
Q Consensus 429 pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~a-vd~~g~~w~~~~e~~-~v~a~l~~~~~~~ 506 (700)
-++|+|+.|=.+.+-..-......++...|.-.-..+.+.|.+.|.-|+. +|..|-.-+...+.. ...++.+.+. ..
T Consensus 198 GrpV~VIAndkg~~tke~~~rnfG~~~peGyRKAlRlmkLAekfgLPIVtLVDTpGA~pG~~AEe~Gq~~aIArnl~-am 276 (762)
T PLN03229 198 GKRYMFIGHQKGRNTKENIMRNFGMPTPHGYRKALRMMYYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLR-TM 276 (762)
T ss_pred CEEEEEEEecCCccccccccccCCCCCHHHHHHHHHHHHHHHHcCCCEEEEEECCCcCCCchhHHHhHHHHHHHHHH-HH
Confidence 36888888876542111000001111112222334677889999999777 466663223223322 2223333333 22
Q ss_pred CCCCCCE--EEEecC-hhHHHHHHH
Q 040989 507 KLEKLPL--VALGAS-SGGYFVSAL 528 (700)
Q Consensus 507 ~l~~~pl--~l~G~S-~GG~~a~~l 528 (700)
.--..|+ +++|.+ +||+.+..+
T Consensus 277 asl~VP~ISVViGeggSGGAlA~g~ 301 (762)
T PLN03229 277 FGLKVPIVSIVIGEGGSGGALAIGC 301 (762)
T ss_pred hCCCCCEEEEEeCCcchHHHHHhhc
Confidence 1134666 678888 455555444
No 302
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=21.74 E-value=1.1e+02 Score=31.62 Aligned_cols=38 Identities=21% Similarity=0.208 Sum_probs=28.5
Q ss_pred HHHHHHHHHHcCCCCCCEEEEecChhHHHHHHHhhccCc
Q 040989 496 REIIRWWVERHKLEKLPLVALGASSGGYFVSALAKGLRF 534 (700)
Q Consensus 496 ~a~l~~~~~~~~l~~~pl~l~G~S~GG~~a~~la~~~~~ 534 (700)
..+++.+.+ +++....-++.|.|+|+-++..+++....
T Consensus 15 ~GVl~~L~e-~gi~~~~~~i~G~SAGAl~aa~~asg~~~ 52 (233)
T cd07224 15 LGVLSLLIE-AGVINETTPLAGASAGSLAAACSASGLSP 52 (233)
T ss_pred HHHHHHHHH-cCCCCCCCEEEEEcHHHHHHHHHHcCCCH
Confidence 345666654 45655566999999999999999997653
No 303
>PLN03230 acetyl-coenzyme A carboxylase carboxyl transferase; Provisional
Probab=21.66 E-value=3.8e+02 Score=30.65 Aligned_cols=98 Identities=19% Similarity=0.204 Sum_probs=49.9
Q ss_pred CceEEEEeccCCCCCCccccCCCCCCCCCCCchHHHHHHHHHHCCcEEEEE-cCCCCcCCCcccH-HHHHHHHHHHHHHc
Q 040989 429 PKAVLFLAHGCNGRAVHFWDRSPNCPNCIGLPEERLLVLHALSRGFAIITI-SSAGRCWTLGEER-LVVREIIRWWVERH 506 (700)
Q Consensus 429 pr~vvv~lHG~~~~~~~~~~~s~~c~~c~glpe~~~~~~~~~~~GyaV~av-d~~g~~w~~~~e~-~~v~a~l~~~~~~~ 506 (700)
-++|+|+.|=.+.....--.+.-.++...|.-.-..+.+.+.+.|.-|+.+ |..|-.-+...|. ....++.+.+. +.
T Consensus 177 GrpV~VIandkg~~~ke~~~rnfG~~~peGyRKAlR~mklAekf~lPIVtLVDTpGA~pG~~AEe~Gqa~aIAr~l~-am 255 (431)
T PLN03230 177 GMSFMFIGHQKGRNTKENIYRNFAMPQPNGYRKALRFMRHAEKFGFPILTFVDTPGAYAGIKAEELGQGEAIAFNLR-EM 255 (431)
T ss_pred CEEEEEEEeccCcccccccccCCCCCCHHHHHHHHHHHHHHHHcCCCEEEEEeCCCcCCCHHHHHHhHHHHHHHHHH-HH
Confidence 478999998775542111111001122223333457788899999998774 6666332222222 22233322222 22
Q ss_pred CCCCCCE--EEEecC-hhHHHHHH
Q 040989 507 KLEKLPL--VALGAS-SGGYFVSA 527 (700)
Q Consensus 507 ~l~~~pl--~l~G~S-~GG~~a~~ 527 (700)
.--..|+ +++|.+ +||+.+..
T Consensus 256 s~l~VPiISVViGeGgSGGAlalg 279 (431)
T PLN03230 256 FGLRVPIIATVIGEGGSGGALAIG 279 (431)
T ss_pred hcCCCCEEEEEeCCCCcHHHHHhh
Confidence 1134676 678988 66655543
No 304
>PF09379 FERM_N: FERM N-terminal domain ; InterPro: IPR018979 This domain is the N-terminal ubiquitin-like structural domain of the FERM domain. The FERM domain (F for 4.1 protein, E for ezrin, R for radixin and M for moesin) is a widespread protein module involved in localising proteins to the plasma membrane []. FERM domains are found in a number of cytoskeletal-associated proteins that associate with various proteins at the interface between the plasma membrane and the cytoskeleton. The FERM domain is located at the N terminus of the majority of FERM-containing proteins [, ], which includes: Band 4.1, which links the spectrin-actin cytoskeleton of erythrocytes to the plasma membrane. Ezrin, a component of the undercoat of the microvilli plasma membrane. Moesin, which is probably involved in binding major cytoskeletal structures to the plasma membrane. Radixin, which is involved in the binding of the barbed end of actin filaments to the plasma membrane in the undercoat of the cell- to-cell adherens junction. Talin, a cytoskeletal protein concentrated in regions of cell-substratum contact and, in lymphocytes, of cell-cell contacts. Filopodin, a slime mold protein that binds actin and which is involved in the control of cell motility and chemotaxis. Merlin (or schwannomin). Protein NBL4. Unconventional myosins X, VIIa and XV, which are mutated in congenital deafness. Focal-adhesion kinases (FAKs), cytoplasmic protein tyrosine kinases involved in signalling through integrins. Janus tyrosine kinases (JAKs), cytoplasmic tyrosine kinases that are non-covalently associated with the cytoplasmic tails of receptors for cytokines or polypeptidic hormones. Non-receptor tyrosine-protein kinase TYK2. Protein-tyrosine phosphatases PTPN3 and PTPN4, enzyme that appear to act at junctions between the membrane and the cytoskeleton. Protein-tyrosine phosphatases PTPN14 and PTP-D1, PTP-RL10 and PTP2E. Caenorhabditis elegans protein phosphatase ptp-1. Ezrin, moesin, and radixin are highly related proteins (ERM protein family), but the other proteins in which the FERM domain is found do not share any region of similarity outside of this domain. ERM proteins are made of three domains, the FERM domain, a central helical domain and a C-terminal tail domain, which binds F-actin. The amino-acid sequence of the FERM domain is highly conserved among ERM proteins and is responsible for membrane association by direct binding to the cytoplasmic domain or tail of integral membrane proteins. ERM proteins are regulated by an intramolecular association of the FERM and C-terminal tail domains that masks their binding sites for other molecules. For cytoskeleton-membrane cross-linking, the dormant molecules becomes activated and the FERM domain attaches to the membrane by binding specific membrane proteins, while the last 34 residues of the tail bind actin filaments. Aside from binding to membranes, the activated FERM domain of ERM proteins can also bind the guanine nucleotide dissociation inhibitor of Rho GTPase (RhoDGI), which suggests that in addition to functioning as a cross-linker, ERM proteins may influence Rho signalling pathways. The crystal structure of the FERM domain reveals that it is composed of three structural modules (F1, F2, and F3) that together form a compact clover-shaped structure []. The FERM domain has also been called the amino-terminal domain, the 30kDa domain, 4.1N30, the membrane-cytoskeletal-linking domain, the ERM-like domain, the ezrin-like domain of the band 4.1 superfamily, the conserved N-terminal region, and the membrane attachment domain [].; PDB: 1EF1_B 1SGH_A 1E5W_A 2KC2_A 2KMA_A 3IVF_A 1H4R_B 3U8Z_A 1ISN_A 3BIN_A ....
Probab=21.58 E-value=1.3e+02 Score=25.23 Aligned_cols=37 Identities=22% Similarity=0.380 Sum_probs=30.7
Q ss_pred CeeceeecCCCCCHHHHHHHHHhhcccCCceeEEEEEE
Q 040989 89 GQTKGIIVSDDITYKELVDRLYGIVKVDTNEYVITMKS 126 (700)
Q Consensus 89 ~~~kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l~~k~ 126 (700)
+..+-+.|.++.|=.+|++.||..++|-...+ +.+.|
T Consensus 6 ~~~~~~~v~~~~t~~~l~~~v~~~l~l~e~~~-FgL~~ 42 (80)
T PF09379_consen 6 GTTKTFEVDPKTTGQDLLEQVCDKLGLKEKEY-FGLQY 42 (80)
T ss_dssp EEEEEEEEETTSBHHHHHHHHHHHHTTSSGGG-EEEEE
T ss_pred CCcEEEEEcCCCcHHHHHHHHHHHcCCCCccE-EEEEE
Confidence 34467889999999999999999999987655 56665
No 305
>cd01782 AF6_RA_repeat1 Ubiquitin domain of AT-6, first repeat. The AF-6 protein (also known as afadin and canoe) is a multidomain cell junction protein that contains two N-terminal Ras-associating (RA) domains in addition to FHA (forkhead-associated), DIL (class V myosin homology region), and PDZ domains and a proline-rich region. AF6 acts downstream of the Egfr (Epidermal Growth Factor-receptor)/Ras signalling pathway and provides a link from Egfr to cytoskeletal elements.
Probab=21.56 E-value=1.3e+02 Score=27.79 Aligned_cols=26 Identities=35% Similarity=0.397 Sum_probs=25.1
Q ss_pred eceeecCCCCCHHHHHHHHHhhcccC
Q 040989 91 TKGIIVSDDITYKELVDRLYGIVKVD 116 (700)
Q Consensus 91 ~kgI~V~~~~ty~~l~~~l~~~l~ID 116 (700)
.|+|.|+..||=.+.+.-|.+||.+|
T Consensus 37 tK~VrVsS~~tt~eVI~~LLeKFk~d 62 (112)
T cd01782 37 TKCIRVSSTATTRDVIDTLSEKFRPD 62 (112)
T ss_pred EEEEEEecCCCHHHHHHHHHHHhccc
Confidence 79999999999999999999999988
No 306
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=21.20 E-value=1.6e+02 Score=31.93 Aligned_cols=64 Identities=19% Similarity=0.194 Sum_probs=37.4
Q ss_pred HHHHHHHHCCcEEEEEcCCC-CcCC---Cccc--HHHHHHHHHHHHHHc---CC-CCCCEEEEecChhHHHHHH
Q 040989 464 LLVLHALSRGFAIITISSAG-RCWT---LGEE--RLVVREIIRWWVERH---KL-EKLPLVALGASSGGYFVSA 527 (700)
Q Consensus 464 ~~~~~~~~~GyaV~avd~~g-~~w~---~~~e--~~~v~a~l~~~~~~~---~l-~~~pl~l~G~S~GG~~a~~ 527 (700)
.-...+..=.-|++++.|-. -+|. .+.+ ....+++++.+.++. .- ..-++|++|.|+|++-+..
T Consensus 52 ~a~E~l~~GD~A~va~QYSylPSw~sfl~dr~~a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~ 125 (289)
T PF10081_consen 52 DALEYLYGGDVAIVAMQYSYLPSWLSFLVDRDAAREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEA 125 (289)
T ss_pred hHHHHHhCCCeEEEEeccccccchHHHhcccchHHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccccchhh
Confidence 34455666667888877753 3442 2222 244566666665543 11 2234899999999876654
No 307
>PTZ00044 ubiquitin; Provisional
Probab=20.79 E-value=1.3e+02 Score=25.03 Aligned_cols=33 Identities=12% Similarity=0.114 Sum_probs=28.3
Q ss_pred eeceeecCCCCCHHHHHHHHHhhcccCCceeEE
Q 040989 90 QTKGIIVSDDITYKELVDRLYGIVKVDTNEYVI 122 (700)
Q Consensus 90 ~~kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l 122 (700)
....+.+....|-.+|+.+|+...++.+...+|
T Consensus 11 ~~~~l~v~~~~tv~~lK~~i~~~~gi~~~~q~L 43 (76)
T PTZ00044 11 KKQSFNFEPDNTVQQVKMALQEKEGIDVKQIRL 43 (76)
T ss_pred CEEEEEECCCCcHHHHHHHHHHHHCCCHHHeEE
Confidence 345678899999999999999999999987644
No 308
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=20.41 E-value=9.2e+02 Score=24.56 Aligned_cols=40 Identities=20% Similarity=0.266 Sum_probs=27.1
Q ss_pred HHHHHHhCCCeeeEEEecCCcCCccccccCCCCCCHHHHHHH
Q 040989 576 FLVVLRNKGIDVAEIECMEFPLSRNFFTDRIPGLEQANSTKL 617 (700)
Q Consensus 576 ~~~~L~~~gvp~~~i~~~~~~v~p~~f~~rdp~I~~~~S~~l 617 (700)
..+.|.+.||....++..++.-.++-|. |.+ .+.++-+.+
T Consensus 122 ~~~ll~klGv~~~~~~~G~~K~~~~~~~-~~~-~s~~~r~~~ 161 (222)
T cd07018 122 FKGLLDKLGVEVQVFRVGEYKSAVEPFT-RDD-MSPEAREQT 161 (222)
T ss_pred HHHHHHHcCCcEEEEEEeccccccchhh-ccc-CCHHHHHHH
Confidence 4566778999999999998777777663 323 355544433
No 309
>cd01804 midnolin_N Ubiquitin-like domain of midnolin. midnolin_N Midnolin (midbrain nucleolar protein) is expressed in the nucleolus and is thought to regulate genes involved in neurogenesis. Midnolin contains an amino-terminal ubiquitin-like domain.
Probab=20.36 E-value=1.2e+02 Score=25.88 Aligned_cols=34 Identities=24% Similarity=0.277 Sum_probs=28.3
Q ss_pred CeeceeecCCCCCHHHHHHHHHhhcccCCceeEE
Q 040989 89 GQTKGIIVSDDITYKELVDRLYGIVKVDTNEYVI 122 (700)
Q Consensus 89 ~~~kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l 122 (700)
|+...+.|+...|..+|+.+|.+.+++.+...+|
T Consensus 11 G~~~~l~v~~~~TV~~LK~~I~~~~~~~~~~qrL 44 (78)
T cd01804 11 GTRFDLSVPPDETVEGLKKRISQRLKVPKERLAL 44 (78)
T ss_pred CCEEEEEECCcCHHHHHHHHHHHHhCCChHHEEE
Confidence 3446789999999999999999999998875533
No 310
>PF02017 CIDE-N: CIDE-N domain; InterPro: IPR003508 This domain consists of caspase-activated (CAD) nucleases, which induce DNA fragmentation and chromatin condensation during apoptosis, and the cell death activator proteins CIDE-A and CIDE-B, which are inhibitors of CAD nuclease. The two proteins interact through the region defined by the method signatures.; GO: 0006915 apoptosis, 0005622 intracellular; PDB: 1IBX_A 2EEL_A 1F2R_I 1C9F_A 1D4B_A.
Probab=20.25 E-value=1.5e+02 Score=25.88 Aligned_cols=34 Identities=12% Similarity=0.246 Sum_probs=26.0
Q ss_pred EeCCeeceeecCCCCCHHHHHHHHHhhcccCCceeEE
Q 040989 86 YSGGQTKGIIVSDDITYKELVDRLYGIVKVDTNEYVI 122 (700)
Q Consensus 86 Y~G~~~kgI~V~~~~ty~~l~~~l~~~l~ID~~~~~l 122 (700)
+.....+||.. -|+.||++|.|++|+|......|
T Consensus 10 ~~r~~k~Gv~A---~sL~eL~~K~~~~l~~~~~~~~l 43 (78)
T PF02017_consen 10 HDRSVKKGVAA---SSLEELLEKACDKLQLPEEPVRL 43 (78)
T ss_dssp TTSSCEEEEEE---SSHHHHHHHHHHHHT-SSSTCEE
T ss_pred CCCCceEeEEc---CCHHHHHHHHHHHhCCCCcCcEE
Confidence 44556778887 58999999999999999765543
Done!