BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040990
(133 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93W54|ICMTB_ARATH Protein-S-isoprenylcysteine O-methyltransferase B OS=Arabidopsis
thaliana GN=ICMTB PE=1 SV=1
Length = 197
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 51/69 (73%)
Query: 63 GWAFTYLIKVSREEHHELITHGVHRFASHPSYCGFHIPSVGTQTMLCNPMSTIGPAIVVC 122
G +FT+LIK+ REEHH+L+T GV++ HPSY GF I SVGTQ MLCNP+S I A+VV
Sbjct: 101 GRSFTHLIKIRREEHHKLVTEGVYQIMRHPSYSGFLIWSVGTQVMLCNPISAIAFAVVVW 160
Query: 123 HSFADMITH 131
FA+ I +
Sbjct: 161 RFFAERIPY 169
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 16/29 (55%)
Query: 33 TAGRQLYQTSFTAFFFQVPEYILAIAFHG 61
T RQL Q FF EYILAIA HG
Sbjct: 8 TGFRQLTQMFLAIIFFHTSEYILAIAIHG 36
>sp|Q9FMW9|ICMTA_ARATH Protein-S-isoprenylcysteine O-methyltransferase A OS=Arabidopsis
thaliana GN=ICMTA PE=1 SV=1
Length = 197
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 48/73 (65%)
Query: 39 YQTSFTAFFFQVPEYILAIAFHGTGWAFTYLIKVSREEHHELITHGVHRFASHPSYCGFH 98
+ ++F V E I A G +FT+LIK++ EEHH L+THGV+R HPSYCGF
Sbjct: 77 WVSNFGLIMIIVGEIIRKAAIITAGRSFTHLIKINYEEHHGLVTHGVYRLMRHPSYCGFL 136
Query: 99 IPSVGTQTMLCNP 111
I SVGTQ MLCNP
Sbjct: 137 IWSVGTQVMLCNP 149
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 33 TAGRQLYQTSFTAFFFQVPEYILAIAFHG 61
T+ RQL Q + FF + EYILAI HG
Sbjct: 8 TSIRQLSQMLLSLIFFHISEYILAITIHG 36
>sp|Q7XSR9|ICMT_ORYSJ Probable protein-S-isoprenylcysteine O-methyltransferase OS=Oryza
sativa subsp. japonica GN=ICMT PE=2 SV=2
Length = 191
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 53/82 (64%)
Query: 50 VPEYILAIAFHGTGWAFTYLIKVSREEHHELITHGVHRFASHPSYCGFHIPSVGTQTMLC 109
+ E I +A G +FT++I++ E+ H+LITHGV+R HP Y GF I +VGTQ MLC
Sbjct: 82 IGEVIRKLAVVTAGRSFTHVIRIHYEDQHKLITHGVYRLMRHPGYSGFLIWAVGTQVMLC 141
Query: 110 NPMSTIGPAIVVCHSFADMITH 131
NP+ST+ +V+ F+ I +
Sbjct: 142 NPLSTVAFTLVLWRFFSKRIPY 163
>sp|A2XX73|ICMT_ORYSI Probable protein-S-isoprenylcysteine O-methyltransferase OS=Oryza
sativa subsp. indica GN=ICMT PE=3 SV=2
Length = 191
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 53/82 (64%)
Query: 50 VPEYILAIAFHGTGWAFTYLIKVSREEHHELITHGVHRFASHPSYCGFHIPSVGTQTMLC 109
+ E I +A G +FT++I++ E+ H+LITHGV+R HP Y GF I +VGTQ MLC
Sbjct: 82 IGEVIRKLAVVTAGRSFTHVIRIHYEDQHKLITHGVYRLMRHPGYSGFLIWAVGTQVMLC 141
Query: 110 NPMSTIGPAIVVCHSFADMITH 131
NP+ST+ +V+ F+ I +
Sbjct: 142 NPLSTVAFTLVLWRFFSKRIPY 163
>sp|P87014|MAM4_SCHPO Protein-S-isoprenylcysteine O-methyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=mam4 PE=3 SV=1
Length = 236
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 38 LYQTSFTAFFFQVPEYILAIAFHGTGWAFTYLIKVSREEHHELITHGVHRFASHPSYCGF 97
+YQTS F + +Y+ + A G +F++++ R + H L+T G++ + HPSY GF
Sbjct: 116 VYQTSALGFL-CLGQYLRSSAMVQAGQSFSHIVASKRNKDHLLVTDGIYAYVRHPSYVGF 174
Query: 98 HIPSVGTQTMLCNPMSTIGPAIVVCHSFADMIT 130
I ++GTQ +L N +ST+ ++V+ F+ IT
Sbjct: 175 FIWALGTQMLLGNFVSTLLFSLVLWKFFSQRIT 207
>sp|Q558K8|ICMT_DICDI Protein-S-isoprenylcysteine O-methyltransferase OS=Dictyostelium
discoideum GN=icmt-1 PE=2 SV=2
Length = 237
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 43/65 (66%)
Query: 52 EYILAIAFHGTGWAFTYLIKVSREEHHELITHGVHRFASHPSYCGFHIPSVGTQTMLCNP 111
+ + ++A G FT+L++ + + H L+T+G++++ HPSY G+ + SV TQ +L NP
Sbjct: 130 QIVRSVAMDTAGSNFTHLVQEEKRDDHVLVTNGIYQYMRHPSYFGWFVWSVSTQVILMNP 189
Query: 112 MSTIG 116
+S IG
Sbjct: 190 ISIIG 194
>sp|Q9WVM4|ICMT_RAT Protein-S-isoprenylcysteine O-methyltransferase (Fragment)
OS=Rattus norvegicus GN=Icmt PE=1 SV=1
Length = 232
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 52 EYILAIAFHGTGWAFTYLIKVSREEHHELITHGVHRFASHPSYCGFHIPSVGTQTMLCNP 111
E + +A G F ++++ + + H L+T GV+ + HPSY G+ S+GTQ MLCNP
Sbjct: 119 ECLRKVAMFTAGSNFNHVVQSEKSDTHTLVTSGVYAWCRHPSYVGWFYWSIGTQVMLCNP 178
Query: 112 MSTIGPAIVVCHSFAD 127
+ + A+ V F D
Sbjct: 179 ICGVVYALTVWRFFRD 194
>sp|O60725|ICMT_HUMAN Protein-S-isoprenylcysteine O-methyltransferase OS=Homo sapiens
GN=ICMT PE=1 SV=1
Length = 284
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 36 RQLYQTSFTAFFFQV-PEYILAIAFHGTGWAFTYLIKVSREEHHELITHGVHRFASHPSY 94
+Q+ S T V E + A G F ++++ + + H L+T GV+ + HPSY
Sbjct: 154 KQITWLSVTGLLMVVFGECLRKAAMFTAGSNFNHVVQNEKSDTHTLVTSGVYAWFRHPSY 213
Query: 95 CGFHIPSVGTQTMLCNPMSTIGPAIVVCHSFAD 127
G+ S+GTQ MLCNP+ + A+ V F D
Sbjct: 214 VGWFYWSIGTQVMLCNPICGVSYALTVWRFFRD 246
>sp|Q9EQK7|ICMT_MOUSE Protein-S-isoprenylcysteine O-methyltransferase OS=Mus musculus
GN=Icmt PE=2 SV=2
Length = 283
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 66 FTYLIKVSREEHHELITHGVHRFASHPSYCGFHIPSVGTQTMLCNPMSTIGPAIVVCHSF 125
F ++++ + + H L+T GV+ + HPSY G+ S+GTQ MLCNP+ + A+ V F
Sbjct: 184 FNHVVQSEKSDTHTLVTSGVYAWCRHPSYVGWFYWSIGTQVMLCNPICGVVYALTVWRFF 243
Query: 126 AD 127
D
Sbjct: 244 RD 245
>sp|O12947|ICMT_XENLA Protein-S-isoprenylcysteine O-methyltransferase OS=Xenopus laevis
GN=icmt PE=2 SV=1
Length = 288
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%)
Query: 66 FTYLIKVSREEHHELITHGVHRFASHPSYCGFHIPSVGTQTMLCNPMSTIGPAIVVCHSF 125
F ++++ + + H L+T GV+ + HPSY G+ S+GTQ +LCNP+ +G + F
Sbjct: 189 FNHIVQNEKSDSHTLVTSGVYSWFRHPSYVGWFYWSIGTQVLLCNPLCLVGYTLASWRFF 248
Query: 126 ADMI 129
++ I
Sbjct: 249 SERI 252
>sp|P32584|STE14_YEAST Protein-S-isoprenylcysteine O-methyltransferase OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=STE14 PE=1
SV=1
Length = 239
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%)
Query: 52 EYILAIAFHGTGWAFTYLIKVSREEHHELITHGVHRFASHPSYCGFHIPSVGTQTMLCNP 111
+Y IA H G +F++++K +E H L+ GV+ ++ HPSY GF ++GTQ +L NP
Sbjct: 133 QYTRTIAMHTAGHSFSHIVKTKKESDHVLVKTGVYSWSRHPSYLGFFWWAIGTQLLLLNP 192
Query: 112 MSTIGPAIVVCHSFADMI 129
+S + V+ F+D I
Sbjct: 193 LSLVIFIFVLWKFFSDRI 210
>sp|Q5W8I7|VGL2B_DANRE Vesicular glutamate transporter 2.2 OS=Danio rerio GN=slc17a6a PE=2
SV=1
Length = 587
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 20/108 (18%)
Query: 10 PSLDDREKT--ESSFDGNDRNIGLHTAGRQLYQTSFTAFFFQVPEYILAIAFHGTGWAFT 67
P++ D E+T E S + + +G + Y+T + FF +P Y + +A W F
Sbjct: 273 PTITDEERTYIEESIGESAKLLG----AMEKYKTPWRKFFTSMPVYAIIVANFCRSWTF- 327
Query: 68 YLIKVSREEHHELITHGVHRFASHPSYCGFHIPSVGTQTMLCNPMSTI 115
YL+ +S+ + E + GF I VG + L + + TI
Sbjct: 328 YLLLISQPAYFEEV-------------FGFEISKVGMVSALPHLVMTI 362
>sp|Q9D517|PLCC_MOUSE 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma OS=Mus
musculus GN=Agpat3 PE=1 SV=2
Length = 376
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 54 ILAIAFHGTGWAFTYLIKVSR--EEHHELITHGVHRFASHPSYCGFHIPSVGTQ 105
+L + G W F ++ R EE + + G+ R A +P Y F + GT+
Sbjct: 126 LLCVPLIGWTWYFLEIVFCKRKWEEDRDTVIEGLRRLADYPEYMWFLLYCEGTR 179
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.139 0.453
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,554,211
Number of Sequences: 539616
Number of extensions: 1955093
Number of successful extensions: 3937
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3921
Number of HSP's gapped (non-prelim): 18
length of query: 133
length of database: 191,569,459
effective HSP length: 99
effective length of query: 34
effective length of database: 138,147,475
effective search space: 4697014150
effective search space used: 4697014150
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)