BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>040993
MASAVRLLHPARAGSQVQVSSSLAVPRTVVFNFNKRQNSKRYIRHSSEFSGQHKLTPVAQ
SSQQNDGVVPSDNEDGVSLGTLKLPGNTDLQRFESLLFQWANSLCQGANLPLPVPLKVDK
IPGGARLGFITVGDGETKVLVYIDCLVFPATGGSGPIFRAIRNGPLKEKSPPGEPRIMRS
LLQALQKSVEIARV

High Scoring Gene Products

Symbol, full name Information P value
AT2G36145 protein from Arabidopsis thaliana 3.1e-44

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  040993
        (194 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006299 - symbol:AT2G36145 "AT2G36145" speci...   466  3.1e-44   1


>TAIR|locus:505006299 [details] [associations]
            symbol:AT2G36145 "AT2G36145" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM;IDA] [GO:0009535 "chloroplast thylakoid membrane"
            evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
            [GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0006098
            "pentose-phosphate shunt" evidence=RCA] [GO:0019252 "starch
            biosynthetic process" evidence=RCA] [GO:0043085 "positive
            regulation of catalytic activity" evidence=RCA] GO:GO:0009570
            EMBL:CP002685 GO:GO:0009535 EMBL:AC007135 EMBL:AY074366
            EMBL:AY117291 EMBL:AY084343 EMBL:AK220614 IPI:IPI00542177
            RefSeq:NP_565835.1 UniGene:At.37584 IntAct:Q8VXY0 STRING:Q8VXY0
            PRIDE:Q8VXY0 EnsemblPlants:AT2G36145.1 GeneID:818187
            KEGG:ath:AT2G36145 TAIR:At2g36145 InParanoid:Q8VXY0 OMA:AIRNGPM
            PhylomeDB:Q8VXY0 ProtClustDB:CLSN2688721 Genevestigator:Q8VXY0
            Uniprot:Q8VXY0
        Length = 186

 Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
 Identities = 99/144 (68%), Positives = 115/144 (79%)

Query:    52 QHKLTPVAQSSQQNDGVVPSDNEDGVSLGTLKLPGNTDLQRFESLLFQWANSLCQGANLP 111
             Q K   VA +S  N GV  ++ EDGVSLGT+KLP +TDL RFE+LLFQWANSLCQGANLP
Sbjct:    44 QVKRAIVANASPGNGGV-KAEEEDGVSLGTMKLPVDTDLARFETLLFQWANSLCQGANLP 102

Query:   112 LPVPLKVDKIPGGARLGFITVGD-GETKVLVYIDCLVFPATGGSGPIFRAIRNGPLKEKS 170
             LPVPLKVD+I GGARLGFI + D G+T V VYIDCLVF  T  +G +F+A RNG  K+K+
Sbjct:   103 LPVPLKVDRISGGARLGFIVMEDEGKTDVPVYIDCLVFQTTE-NGVVFQATRNGRKKDKA 161

Query:   171 PPGEPRIMRSLLQALQKSVEIARV 194
             PPGE RIMRSLL AL+K+VEIARV
Sbjct:   162 PPGEERIMRSLLGALKKAVEIARV 185


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.135   0.391    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      194       194   0.00076  111 3  11 22  0.49    32
                                                     31  0.43    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  580 (62 KB)
  Total size of DFA:  146 KB (2089 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.72u 0.13s 19.85t   Elapsed:  00:00:01
  Total cpu time:  19.72u 0.13s 19.85t   Elapsed:  00:00:01
  Start:  Tue May 21 01:42:31 2013   End:  Tue May 21 01:42:32 2013

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