Query 040995
Match_columns 122
No_of_seqs 119 out of 634
Neff 4.9
Searched_HMMs 13730
Date Mon Mar 25 03:57:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040995.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/040995hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1unda_ a.14.1.1 (A:) Advillin 53.0 1.4 0.00011 23.8 0.1 18 71-88 1-18 (36)
2 d1vi7a2 d.58.11.2 (A:138-208) 50.0 13 0.00098 21.1 4.4 56 62-117 2-63 (71)
3 d1nn7a_ d.42.1.2 (A:) Potassiu 49.1 1.1 8.2E-05 28.7 -0.9 61 52-118 2-64 (105)
4 d2bkfa1 d.15.2.2 (A:1-85) Next 42.0 35 0.0025 21.1 6.9 52 58-112 11-71 (85)
5 d1y6ia2 a.261.1.1 (A:83-233) M 39.3 1.5 0.00011 30.6 -1.7 30 45-79 118-148 (151)
6 d2al3a1 d.15.1.2 (A:10-85) Tet 37.2 16 0.0012 22.3 3.4 37 51-92 2-38 (76)
7 d1qusa_ d.2.1.6 (A:) 36 kDa so 34.9 11 0.00081 28.6 2.8 23 70-92 14-36 (322)
8 d1yu5x1 a.14.1.1 (X:10-76) Vil 30.6 5.4 0.00039 24.1 0.2 19 70-88 31-49 (67)
9 d3kvta_ d.42.1.2 (A:) akv3.1 v 29.5 15 0.0011 22.9 2.3 61 51-118 3-67 (103)
10 d1tjya_ c.93.1.1 (A:) AI-2 rec 27.3 31 0.0022 23.0 3.8 29 63-91 4-35 (316)
11 d1z3xa2 a.261.1.1 (A:88-235) G 26.5 1.2 8.5E-05 31.0 -4.0 29 45-77 118-146 (148)
12 d1y74b1 a.194.1.1 (B:83-132) P 25.4 15 0.0011 20.8 1.6 20 70-89 26-49 (50)
13 d1mlaa1 c.19.1.1 (A:3-127,A:19 25.3 15 0.0011 25.6 1.8 21 71-91 21-41 (235)
14 d1qzpa_ a.14.1.1 (A:) Dematin 24.5 5.9 0.00043 24.0 -0.5 19 70-88 32-50 (68)
15 d1ujsa_ a.14.1.1 (A:) Actin-bi 24.4 7.9 0.00058 24.6 0.1 20 70-89 46-65 (88)
16 d1zavu1 a.108.1.1 (U:1-30) Rib 23.9 19 0.0014 18.2 1.6 19 71-89 12-30 (30)
17 d2nptb1 d.15.2.2 (B:42-123) Mi 23.0 80 0.0058 19.4 5.1 54 63-119 12-72 (82)
18 d1fc4a_ c.67.1.4 (A:) 2-amino- 22.9 42 0.003 24.9 4.2 35 55-92 40-79 (401)
19 d3d37a1 b.106.1.1 (A:6-178) Ba 22.3 26 0.0019 22.8 2.5 22 77-98 146-171 (173)
20 d1oeyj_ d.15.2.2 (J:) Neutroph 22.3 22 0.0016 23.1 2.0 51 61-111 17-75 (105)
21 d1yu8x1 a.14.1.1 (X:42-76) Vil 22.1 9 0.00066 20.3 0.0 17 72-88 1-17 (35)
22 d2nzug1 c.93.1.1 (G:58-332) Gl 20.0 86 0.0063 20.4 5.0 42 71-115 12-58 (275)
No 1
>d1unda_ a.14.1.1 (A:) Advillin {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.97 E-value=1.4 Score=23.81 Aligned_cols=18 Identities=28% Similarity=0.672 Sum_probs=16.6
Q ss_pred ccccHHHHHHHHHHHHhc
Q 040995 71 YLSNPEFLSLLEQAEQEY 88 (122)
Q Consensus 71 yL~~P~F~~LL~~aeeEf 88 (122)
||+.-.|++++.++.+||
T Consensus 1 yLsd~dF~~vFgmsr~eF 18 (36)
T d1unda_ 1 YLSEQDFVSVFGITRGQF 18 (36)
T ss_dssp CCCHHHHHHHHSSCHHHH
T ss_pred CCCHHHHHHHHCcCHHHH
Confidence 789999999999999997
No 2
>d1vi7a2 d.58.11.2 (A:138-208) Hypothetical protein YigZ, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=49.99 E-value=13 Score=21.10 Aligned_cols=56 Identities=20% Similarity=0.180 Sum_probs=41.3
Q ss_pred eeeEEEeecccccHHHHHHHHHHH-----HhcCCCCCCceEec-CCHHHHHHHHHHHHhCcc
Q 040995 62 PKRFVLELGYLSNPEFLSLLEQAE-----QEYGFQQKGILAVP-CPPEELQNVLKYKKRHRR 117 (122)
Q Consensus 62 ~~RfvVpv~yL~~P~F~~LL~~ae-----eEfG~~~~G~l~iP-C~~~~Fe~vl~~~~~~~~ 117 (122)
+.+|.+.++|=....++.||++.. .+||=.-.=.+.|| -.++.|..-|..+.+|+.
T Consensus 2 ~t~~~l~~dY~~~~~v~~~L~~~~~~i~~~~y~~~V~l~v~vp~~~~~~f~~~l~d~t~G~v 63 (71)
T d1vi7a2 2 LTEYTLQCEYHQLTGIEALLGQCDGKIINSDYQAFVLLRVALPAAKVAEFSAKLADFSRGSL 63 (71)
T ss_dssp CEEEEEEECTTTHHHHHHHHHHTTCEEEEEEESSSEEEEEEECSSTHHHHHHHHHHHHTTCC
T ss_pred ceEEEEEeccccHHHHHHHHHHCCCEEEeeeeccEEEEEEEECHHHHHHHHHHHHHhCCCcE
Confidence 468999999999999999999864 45542222224455 467889998888888764
No 3
>d1nn7a_ d.42.1.2 (A:) Potassium channel kv4.2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=49.13 E-value=1.1 Score=28.72 Aligned_cols=61 Identities=16% Similarity=0.309 Sum_probs=41.4
Q ss_pred EEEEeecCCceeeEEEeeccc-ccHHHHHHHHHHHHhcCC-CCCCceEecCCHHHHHHHHHHHHhCccc
Q 040995 52 FAVVAEKGGKPKRFVLELGYL-SNPEFLSLLEQAEQEYGF-QQKGILAVPCPPEELQNVLKYKKRHRRI 118 (122)
Q Consensus 52 ~~VyV~~G~e~~RfvVpv~yL-~~P~F~~LL~~aeeEfG~-~~~G~l~iPC~~~~Fe~vl~~~~~~~~~ 118 (122)
+.+.|| | ++|.+..+-| ++|.. +|.+......+ +.+|.+-|.-++..|++||..++.|.-+
T Consensus 2 I~LNVG-G---~~f~t~~~TL~~~p~s--~l~~~~~~~~~~~~~~~~FiDRdp~~F~~IL~ylR~G~l~ 64 (105)
T d1nn7a_ 2 IVLNVS-G---TRFQTWQDTLERYPDT--LLGSSERDFFYHPETQQYFFDRDPDIFRHILNFYRTGKLH 64 (105)
T ss_dssp EEEEET-T---EEEEECHHHHHTSCSS--STTSGGGGGGEEGGGTEEEECSCTTTHHHHHHHHHHSCBC
T ss_pred EEEEEC-C---EEEEEeHHHHhcCCCC--CccccccccCcCCCCCcEEEeCCHHHHHHHHHHHhcCccc
Confidence 455663 3 8999988866 34431 12222222223 3579999999999999999999998743
No 4
>d2bkfa1 d.15.2.2 (A:1-85) Next to BRCA1 gene 1 protein, NBR1 (KIAA0049) {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.96 E-value=35 Score=21.07 Aligned_cols=52 Identities=10% Similarity=0.152 Sum_probs=37.0
Q ss_pred cCCceeeEEEeecccccHHHHHHHHHHHHhcCCC--------CC-CceEecCCHHHHHHHHHHH
Q 040995 58 KGGKPKRFVLELGYLSNPEFLSLLEQAEQEYGFQ--------QK-GILAVPCPPEELQNVLKYK 112 (122)
Q Consensus 58 ~G~e~~RfvVpv~yL~~P~F~~LL~~aeeEfG~~--------~~-G~l~iPC~~~~Fe~vl~~~ 112 (122)
-|++..||.++.. +++.|.+|..+-+.-||.+ .+ -.++|.|+.+.= ..+...
T Consensus 11 f~~dt~RF~ls~~--~~~~~~~L~~~i~~rf~l~~~~lkY~Ddd~e~v~l~~d~dl~-E~~~~a 71 (85)
T d2bkfa1 11 FKNEIQSFLVSDP--ENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINSQGEYE-EALKMA 71 (85)
T ss_dssp ETTEEEEEEESCG--GGCCHHHHHHHHHHHHTCSSEEEEEECTTSCEEEECSHHHHH-HHHHHH
T ss_pred ECCceEEEEecCC--CCCcHHHHHHHHHHhcCcccceEEEEcCCCCEEEEecHHHHH-HHHHHH
Confidence 3888999998543 4678999999999998853 23 447788988754 444433
No 5
>d1y6ia2 a.261.1.1 (A:83-233) Mg-chelatase cofactor Gun4 {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=39.29 E-value=1.5 Score=30.58 Aligned_cols=30 Identities=17% Similarity=0.421 Sum_probs=18.7
Q ss_pred CCCCCCeEEEEee-cCCceeeEEEeecccccHHHHH
Q 040995 45 KDVKKGHFAVVAE-KGGKPKRFVLELGYLSNPEFLS 79 (122)
Q Consensus 45 ~~v~kG~~~VyV~-~G~e~~RfvVpv~yL~~P~F~~ 79 (122)
...|+||+|+.-. -|- | +--..|+||.|.+
T Consensus 118 l~AP~GHLP~~~~lrG~---~--~~~~l~~h~~~~~ 148 (151)
T d1y6ia2 118 LSAPQGHLPLLNQLRGV---R--VAESLYRHPVWSQ 148 (151)
T ss_dssp TTSCTTCCSCCCCTTCT---H--HHHHHHTSTHHHH
T ss_pred CCCCCCCCCccchhhhH---H--HHHHHHcCcchhh
Confidence 4689999998641 121 1 2224788998864
No 6
>d2al3a1 d.15.1.2 (A:10-85) Tether containing UBX domain for GLUT4 (Tug) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=37.21 E-value=16 Score=22.29 Aligned_cols=37 Identities=19% Similarity=0.322 Sum_probs=27.0
Q ss_pred eEEEEeecCCceeeEEEeecccccHHHHHHHHHHHHhcCCCC
Q 040995 51 HFAVVAEKGGKPKRFVLELGYLSNPEFLSLLEQAEQEYGFQQ 92 (122)
Q Consensus 51 ~~~VyV~~G~e~~RfvVpv~yL~~P~F~~LL~~aeeEfG~~~ 92 (122)
++.|... ..+|..|++.= .-...+.|++|.+.|||+.
T Consensus 2 ~V~Vl~~---~~rR~~VKvtP--~t~l~~VL~eaC~k~~~~~ 38 (76)
T d2al3a1 2 AVSVLAP---NGRRHTVKVTP--STVLLQVLEDTCRRQDFNP 38 (76)
T ss_dssp CEEEECT---TSCEEEECCCT--TSBHHHHHHHHHHHTTCCG
T ss_pred cEEEECC---CCcEEEEEeCC--CcCHHHHHHHHHHHhCCCh
Confidence 4556543 34899998853 3357889999999999975
No 7
>d1qusa_ d.2.1.6 (A:) 36 kDa soluble lytic transglycosylase, SLT35 {Escherichia coli [TaxId: 562]}
Probab=34.88 E-value=11 Score=28.61 Aligned_cols=23 Identities=17% Similarity=0.517 Sum_probs=21.8
Q ss_pred cccccHHHHHHHHHHHHhcCCCC
Q 040995 70 GYLSNPEFLSLLEQAEQEYGFQQ 92 (122)
Q Consensus 70 ~yL~~P~F~~LL~~aeeEfG~~~ 92 (122)
+|.+||.++.+++...+++||+.
T Consensus 14 dya~~p~v~~Fi~~la~~~G~s~ 36 (322)
T d1qusa_ 14 DFANNPNAQQFIDKMVNKHGFDR 36 (322)
T ss_dssp TTTTCHHHHHHHHHHHHHHCCCH
T ss_pred CcccCHHHHHHHHHHHHHhCCCH
Confidence 89999999999999999999985
No 8
>d1yu5x1 a.14.1.1 (X:10-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=30.63 E-value=5.4 Score=24.11 Aligned_cols=19 Identities=16% Similarity=0.406 Sum_probs=18.1
Q ss_pred cccccHHHHHHHHHHHHhc
Q 040995 70 GYLSNPEFLSLLEQAEQEY 88 (122)
Q Consensus 70 ~yL~~P~F~~LL~~aeeEf 88 (122)
.||+.-.|++++.++.+||
T Consensus 31 ~yLsd~dF~~vFgms~~eF 49 (67)
T d1yu5x1 31 NHLSDEDFKAVFGMTRSAF 49 (67)
T ss_dssp GGSCHHHHHHHHSSCHHHH
T ss_pred hhCCHHHHHHHHCcCHHHH
Confidence 7999999999999999998
No 9
>d3kvta_ d.42.1.2 (A:) akv3.1 voltage-gated potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]}
Probab=29.52 E-value=15 Score=22.86 Aligned_cols=61 Identities=13% Similarity=0.162 Sum_probs=42.0
Q ss_pred eEEEEeecCCceeeEEEeeccccc-H--HHHHHHHHHHHhcCCC-CCCceEecCCHHHHHHHHHHHHhCccc
Q 040995 51 HFAVVAEKGGKPKRFVLELGYLSN-P--EFLSLLEQAEQEYGFQ-QKGILAVPCPPEELQNVLKYKKRHRRI 118 (122)
Q Consensus 51 ~~~VyV~~G~e~~RfvVpv~yL~~-P--~F~~LL~~aeeEfG~~-~~G~l~iPC~~~~Fe~vl~~~~~~~~~ 118 (122)
.+.+-|| | ++|.+..+-|.. | .|..+. .....++ .+|.+-|--++..|++||..++.|.-+
T Consensus 3 rI~LNVG-G---~~F~t~~~tL~~~~~s~l~~~~---~~~~~~~~~~~~~fiDRdp~~F~~IL~ylR~g~l~ 67 (103)
T d3kvta_ 3 RVIINVG-G---IRHETYKATLKKIPATRLSRLT---EGMLNYDPVLNEYFFDRHPGVFAQIINYYRSGKLH 67 (103)
T ss_dssp EEEEEET-T---EEEEEEHHHHTTSCSSTTTTCC---TTSTTEETTTTEEEECSCTTTHHHHHHHHHHSCBC
T ss_pred EEEEEEC-C---EEEEEeHHHHhhCccchhHHHH---cCCCccCCCCCcEEecCCHHHHHHHHHHHccCCcc
Confidence 3556673 3 899998887763 4 333222 2222333 479999999999999999999988644
No 10
>d1tjya_ c.93.1.1 (A:) AI-2 receptor LsrB {Salmonella typhi [TaxId: 90370]}
Probab=27.34 E-value=31 Score=23.01 Aligned_cols=29 Identities=17% Similarity=0.125 Sum_probs=21.4
Q ss_pred eeEEEeecccccHHHHHHHH---HHHHhcCCC
Q 040995 63 KRFVLELGYLSNPEFLSLLE---QAEQEYGFQ 91 (122)
Q Consensus 63 ~RfvVpv~yL~~P~F~~LL~---~aeeEfG~~ 91 (122)
+|..+=+..++||.|+.+.+ ++++++||+
T Consensus 4 ~kI~~i~~~~~npf~~~~~~g~~~~a~~~G~~ 35 (316)
T d1tjya_ 4 ERIAFIPKLVGVGFFTSGGNGAQEAGKALGID 35 (316)
T ss_dssp CEEEEECSSSSSHHHHHHHHHHHHHHHHHTCE
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCE
Confidence 45555568899999999865 455688875
No 11
>d1z3xa2 a.261.1.1 (A:88-235) GUN4-like protein Ycf53 {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=26.53 E-value=1.2 Score=30.97 Aligned_cols=29 Identities=14% Similarity=0.350 Sum_probs=18.0
Q ss_pred CCCCCCeEEEEeecCCceeeEEEeecccccHHH
Q 040995 45 KDVKKGHFAVVAEKGGKPKRFVLELGYLSNPEF 77 (122)
Q Consensus 45 ~~v~kG~~~VyV~~G~e~~RfvVpv~yL~~P~F 77 (122)
...|+||+|+.- ..+-+-|=-..|+||.|
T Consensus 118 l~AP~GHLP~~~----~lrg~~~~~~~l~h~a~ 146 (148)
T d1z3xa2 118 LSAPRGHLPLTN----QLRGVQVLNALLNHPAW 146 (148)
T ss_dssp TTSCTTCCSCCC----CTTCSHHHHHHHTCGGG
T ss_pred CCCCCCCCCcCC----ccchHHHHHHHhcCccc
Confidence 358999999863 12223333467777765
No 12
>d1y74b1 a.194.1.1 (B:83-132) Peripheral plasma membrane protein cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.35 E-value=15 Score=20.84 Aligned_cols=20 Identities=35% Similarity=0.732 Sum_probs=15.2
Q ss_pred cccccHHHHHHHHH----HHHhcC
Q 040995 70 GYLSNPEFLSLLEQ----AEQEYG 89 (122)
Q Consensus 70 ~yL~~P~F~~LL~~----aeeEfG 89 (122)
..|+.|-||.||.- |.+-||
T Consensus 26 ~lL~~PH~~aLL~aHD~VA~k~Y~ 49 (50)
T d1y74b1 26 RILTQPHFMALLQTHDVVAHEVYS 49 (50)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhCHHHHHHHHHHHHHHHHhcc
Confidence 46899999999974 555555
No 13
>d1mlaa1 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of malonyl-CoA ACP transacylase FabD {Escherichia coli [TaxId: 562]}
Probab=25.28 E-value=15 Score=25.64 Aligned_cols=21 Identities=19% Similarity=0.275 Sum_probs=18.4
Q ss_pred ccccHHHHHHHHHHHHhcCCC
Q 040995 71 YLSNPEFLSLLEQAEQEYGFQ 91 (122)
Q Consensus 71 yL~~P~F~~LL~~aeeEfG~~ 91 (122)
|-++|.|++.++++.+.+|++
T Consensus 21 ~~~~p~~r~~~~~~~~~l~~~ 41 (235)
T d1mlaa1 21 AASYPIVEETFAEASAALGYD 41 (235)
T ss_dssp HHHCHHHHHHHHHHHHHHTSC
T ss_pred HHCCHHHHHHHHHHHHHhCCC
Confidence 457899999999999999875
No 14
>d1qzpa_ a.14.1.1 (A:) Dematin {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.48 E-value=5.9 Score=24.02 Aligned_cols=19 Identities=21% Similarity=0.412 Sum_probs=17.9
Q ss_pred cccccHHHHHHHHHHHHhc
Q 040995 70 GYLSNPEFLSLLEQAEQEY 88 (122)
Q Consensus 70 ~yL~~P~F~~LL~~aeeEf 88 (122)
.||+.-.|++++.++.+||
T Consensus 32 ~yLsd~dF~~vFgms~~eF 50 (68)
T d1qzpa_ 32 RHLSAEDFSRVFAMSPEEF 50 (68)
T ss_dssp GGBCHHHHHHHSSSCHHHH
T ss_pred hhCCHHHHHHHHCcCHHHH
Confidence 7999999999999999997
No 15
>d1ujsa_ a.14.1.1 (A:) Actin-binding LIM protein homologue KIAA0843 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.43 E-value=7.9 Score=24.56 Aligned_cols=20 Identities=25% Similarity=0.383 Sum_probs=18.5
Q ss_pred cccccHHHHHHHHHHHHhcC
Q 040995 70 GYLSNPEFLSLLEQAEQEYG 89 (122)
Q Consensus 70 ~yL~~P~F~~LL~~aeeEfG 89 (122)
.||+.-.|++++.++.+||-
T Consensus 46 ~YLSdedF~~vFgMsr~eF~ 65 (88)
T d1ujsa_ 46 RHLSQEEFYQVFGMTISEFD 65 (88)
T ss_dssp GGSCTTHHHHHHSSCHHHHT
T ss_pred hcCCHHHHHHHHCcCHHHHH
Confidence 69999999999999999983
No 16
>d1zavu1 a.108.1.1 (U:1-30) Ribosomal protein L7/12, oligomerisation (N-terminal) domain {Thermotoga maritima [TaxId: 2336]}
Probab=23.85 E-value=19 Score=18.24 Aligned_cols=19 Identities=26% Similarity=0.543 Sum_probs=15.1
Q ss_pred ccccHHHHHHHHHHHHhcC
Q 040995 71 YLSNPEFLSLLEQAEQEYG 89 (122)
Q Consensus 71 yL~~P~F~~LL~~aeeEfG 89 (122)
-|.-....+|+++.|+.||
T Consensus 12 kltvaelaelvk~ledkfg 30 (30)
T d1zavu1 12 KLTVSELAELVKKLEDKFG 30 (30)
T ss_dssp HSBHHHHHHHHHHHHHHTC
T ss_pred HhhHHHHHHHHHHHHhhcC
Confidence 3555678899999999987
No 17
>d2nptb1 d.15.2.2 (B:42-123) Mitogen-activated protein kinase kinase kinase 2, MEKK 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.99 E-value=80 Score=19.36 Aligned_cols=54 Identities=17% Similarity=0.405 Sum_probs=40.6
Q ss_pred eeEEEeecccccH-HHHHHHHHHHHhcCCCC-----CCceEec-CCHHHHHHHHHHHHhCcccc
Q 040995 63 KRFVLELGYLSNP-EFLSLLEQAEQEYGFQQ-----KGILAVP-CPPEELQNVLKYKKRHRRIR 119 (122)
Q Consensus 63 ~RfvVpv~yL~~P-~F~~LL~~aeeEfG~~~-----~G~l~iP-C~~~~Fe~vl~~~~~~~~~~ 119 (122)
+|..||+. .| .|.+|..++..-||..= ++.|.|| =.-+..++.+..+.++.|-.
T Consensus 12 EkRIi~f~---RPv~~~dl~~kv~~afGq~ldl~y~n~EL~IPl~~Q~DLDkAvellDrs~~~k 72 (82)
T d2nptb1 12 EKRILQFP---RPVKLEDLRSKAKIAFGQSMDLHYTNNELVIPLTTQDDLDKAVELLDRSIHMK 72 (82)
T ss_dssp EEEEEEEC---SSCCHHHHHHHHHHHHTSCEEEEEEETTEEEECCCHHHHHHHHHHHHHCSSCC
T ss_pred ceEEEecC---CCccHHHHHHHHHHHhCCeeeEEEecCeEEEecccHHHHHHHHHHHccCcccc
Confidence 45555542 33 48999999999999762 5789999 55677899999998887754
No 18
>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}
Probab=22.90 E-value=42 Score=24.85 Aligned_cols=35 Identities=17% Similarity=0.422 Sum_probs=25.0
Q ss_pred EeecCCceeeEE--Eeecccc---cHHHHHHHHHHHHhcCCCC
Q 040995 55 VAEKGGKPKRFV--LELGYLS---NPEFLSLLEQAEQEYGFQQ 92 (122)
Q Consensus 55 yV~~G~e~~Rfv--Vpv~yL~---~P~F~~LL~~aeeEfG~~~ 92 (122)
.+.|| ++|+ .--+||+ ||.+++....+-+.||...
T Consensus 40 ~~~dG---~~~l~f~s~dYLGl~~hp~v~~a~~~a~~~~g~~~ 79 (401)
T d1fc4a_ 40 TVADG---SHVINFCANNYLGLANHPDLIAAAKAGMDSHGFGM 79 (401)
T ss_dssp EBTTS---CEEEECCCSCTTSCTTCHHHHHHHHHHHHHHCSCC
T ss_pred EecCC---CEEEEEEccccccccCCHHHHHHHHHHHHHhCCCc
Confidence 44466 4553 2335663 9999999999999999754
No 19
>d3d37a1 b.106.1.1 (A:6-178) Baseplate protein gpP {Neisseria meningitidis [TaxId: 487]}
Probab=22.34 E-value=26 Score=22.82 Aligned_cols=22 Identities=23% Similarity=0.404 Sum_probs=14.8
Q ss_pred HHHHHHHHHHhcC----CCCCCceEe
Q 040995 77 FLSLLEQAEQEYG----FQQKGILAV 98 (122)
Q Consensus 77 F~~LL~~aeeEfG----~~~~G~l~i 98 (122)
.-+.|++.+++.| |+++|.|+|
T Consensus 146 d~~fl~Rla~~~G~~~~~e~dG~Lv~ 171 (173)
T d3d37a1 146 VWQALTHIANSVGLHPWLEPDGTLVV 171 (173)
T ss_dssp HHHHHHHHHHHTTCEEEECTTSCEEE
T ss_pred HHHHHHHHHHHCCCEEEECCCceEEe
Confidence 3455666666667 567999886
No 20
>d1oeyj_ d.15.2.2 (J:) Neutrophil cytosol factor 4 (p40phox component of NADPH oxidase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.32 E-value=22 Score=23.10 Aligned_cols=51 Identities=22% Similarity=0.262 Sum_probs=35.0
Q ss_pred ceeeEEEeecccccHHHHHHHHHHHHhcCCC--------CCCceEecCCHHHHHHHHHH
Q 040995 61 KPKRFVLELGYLSNPEFLSLLEQAEQEYGFQ--------QKGILAVPCPPEELQNVLKY 111 (122)
Q Consensus 61 e~~RfvVpv~yL~~P~F~~LL~~aeeEfG~~--------~~G~l~iPC~~~~Fe~vl~~ 111 (122)
..+=.-|.-++-..|.|.+||..-.++|+=+ .+|-|.=-=+-+..+=++..
T Consensus 17 ~~rDI~veedl~~~P~ykdLl~lmr~~f~~~dIaLNYrD~eGDLIRllddeDv~LMv~~ 75 (105)
T d1oeyj_ 17 TIKDIAVEEDLSSTPLLKDLLELTRREFQREDIALNYRDAEGDLVRLLSDEDVALMVRQ 75 (105)
T ss_dssp EEEEEEECSCTTCCCCHHHHHHHHHHHHCCSSEEEEEECTTSCEEECCSHHHHHHHHHH
T ss_pred eeeeEEEccccccCccHHHHHHHHHHHhccceeEeeeecCCCCEEEEcchhhHHHHHHH
Confidence 3466777889999999999999999999732 35655433444444444443
No 21
>d1yu8x1 a.14.1.1 (X:42-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=22.11 E-value=9 Score=20.27 Aligned_cols=17 Identities=18% Similarity=0.489 Sum_probs=13.8
Q ss_pred cccHHHHHHHHHHHHhc
Q 040995 72 LSNPEFLSLLEQAEQEY 88 (122)
Q Consensus 72 L~~P~F~~LL~~aeeEf 88 (122)
|+.-.|++++.++.+||
T Consensus 1 Lsd~dF~~vfgmsr~eF 17 (35)
T d1yu8x1 1 LSDEDFKAVFGMTRSAF 17 (35)
T ss_dssp SCHHHHHHHHSSCHHHH
T ss_pred CCHHHHHHHHCCCHHHH
Confidence 56677888988888887
No 22
>d2nzug1 c.93.1.1 (G:58-332) Glucose-resistance amylase regulator CcpA, C-terminal domain {Bacillus megaterium [TaxId: 1404]}
Probab=20.04 E-value=86 Score=20.42 Aligned_cols=42 Identities=14% Similarity=0.153 Sum_probs=25.1
Q ss_pred ccccHHHHHHHHHHHH---hcCCCCCCceEecCC--HHHHHHHHHHHHhC
Q 040995 71 YLSNPEFLSLLEQAEQ---EYGFQQKGILAVPCP--PEELQNVLKYKKRH 115 (122)
Q Consensus 71 yL~~P~F~~LL~~aee---EfG~~~~G~l~iPC~--~~~Fe~vl~~~~~~ 115 (122)
.|++|.|.++++-.++ +.||+- +..+++ .+....++..+...
T Consensus 12 ~l~~~f~~~~~~gi~~~~~~~g~~~---~~~~~~~~~~~e~~~i~~~~~~ 58 (275)
T d2nzug1 12 DISNIFYAELARGIEDIATMYKYNI---ILSNSDQNQDKELHLLNNMLGK 58 (275)
T ss_dssp CTTSHHHHHHHHHHHHHHHHTTCEE---EEEECTTCHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHHHHcCCEE---EEEECCCCHHHHHHHHHHHHhc
Confidence 5899999988877654 556542 223333 44555566555443
Done!