Query 040997
Match_columns 128
No_of_seqs 127 out of 1139
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 03:59:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040997.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040997hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 99.9 1.5E-26 5.2E-31 173.1 12.7 123 3-128 13-138 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 99.9 9.8E-25 3.3E-29 164.2 12.0 128 1-128 6-139 (482)
3 2acv_A Triterpene UDP-glucosyl 99.9 1.7E-21 5.7E-26 146.1 12.5 118 3-128 9-135 (463)
4 2c1x_A UDP-glucose flavonoid 3 99.9 1.7E-21 5.9E-26 145.8 12.4 125 2-128 6-133 (456)
5 2vch_A Hydroquinone glucosyltr 99.8 1.8E-20 6.1E-25 141.1 13.6 121 3-128 6-131 (480)
6 2iya_A OLEI, oleandomycin glyc 99.8 1.3E-19 4.4E-24 133.6 14.1 116 1-128 10-130 (424)
7 4amg_A Snogd; transferase, pol 99.8 6.1E-18 2.1E-22 123.3 11.8 114 2-128 21-149 (400)
8 3ia7_A CALG4; glycosysltransfe 99.7 2.1E-16 7.2E-21 115.0 12.6 116 1-128 2-124 (402)
9 2iyf_A OLED, oleandomycin glyc 99.7 1.4E-15 4.8E-20 112.0 12.7 116 1-128 5-125 (430)
10 1iir_A Glycosyltransferase GTF 99.7 1.2E-15 4.2E-20 112.2 11.6 112 4-128 1-117 (415)
11 3rsc_A CALG2; TDP, enediyne, s 99.6 1.9E-15 6.6E-20 110.7 10.7 113 4-128 21-140 (415)
12 1rrv_A Glycosyltransferase GTF 99.6 1.5E-14 5E-19 106.5 10.0 112 4-128 1-118 (416)
13 2yjn_A ERYCIII, glycosyltransf 99.5 4E-14 1.4E-18 104.9 9.2 114 3-128 20-165 (441)
14 2p6p_A Glycosyl transferase; X 99.5 2.8E-13 9.6E-18 98.4 12.5 113 4-128 1-128 (384)
15 3oti_A CALG3; calicheamicin, T 99.4 1.6E-12 5.4E-17 94.9 11.7 110 3-128 20-151 (398)
16 3h4t_A Glycosyltransferase GTF 99.4 6.5E-13 2.2E-17 97.6 6.8 111 4-128 1-116 (404)
17 4fzr_A SSFS6; structural genom 99.4 1.2E-12 4.2E-17 95.5 7.5 114 3-128 15-144 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 99.4 4.6E-12 1.6E-16 92.0 10.1 114 3-128 1-135 (391)
19 3otg_A CALG1; calicheamicin, T 99.2 3.8E-11 1.3E-15 87.6 8.0 112 3-128 20-151 (412)
20 3s2u_A UDP-N-acetylglucosamine 99.0 5.8E-09 2E-13 75.8 10.7 98 1-118 1-103 (365)
21 1f0k_A MURG, UDP-N-acetylgluco 98.3 1E-05 3.5E-10 57.7 10.6 39 4-42 7-45 (364)
22 2iuy_A Avigt4, glycosyltransfe 95.5 0.021 7.1E-07 40.1 5.0 41 1-41 1-57 (342)
23 3okp_A GDP-mannose-dependent a 95.2 0.14 4.7E-06 36.3 8.6 60 1-67 2-65 (394)
24 2x6q_A Trehalose-synthase TRET 94.7 0.067 2.3E-06 38.5 5.9 42 1-42 38-81 (416)
25 3c48_A Predicted glycosyltrans 94.7 0.053 1.8E-06 39.3 5.3 40 3-42 20-70 (438)
26 3fro_A GLGA glycogen synthase; 94.6 0.066 2.3E-06 38.5 5.6 40 2-41 1-45 (439)
27 1ccw_A Protein (glutamate muta 94.3 0.13 4.6E-06 31.9 5.8 45 1-45 1-45 (137)
28 2r60_A Glycosyl transferase, g 93.9 0.074 2.5E-06 39.4 4.7 38 4-41 8-60 (499)
29 2iw1_A Lipopolysaccharide core 92.9 0.13 4.5E-06 36.2 4.4 37 5-41 2-41 (374)
30 2x0d_A WSAF; GT4 family, trans 92.5 0.11 3.6E-06 38.2 3.5 39 3-41 46-89 (413)
31 2gek_A Phosphatidylinositol ma 90.8 0.45 1.5E-05 33.8 5.3 41 3-43 20-64 (406)
32 1id1_A Putative potassium chan 90.7 0.25 8.4E-06 30.8 3.5 35 1-40 1-35 (153)
33 1y80_A Predicted cobalamin bin 89.4 0.93 3.2E-05 29.9 5.6 46 3-48 88-133 (210)
34 2jjm_A Glycosyl transferase, g 89.3 0.59 2E-05 33.2 4.9 38 4-41 16-54 (394)
35 1rzu_A Glycogen synthase 1; gl 89.2 0.5 1.7E-05 34.7 4.6 38 4-41 1-44 (485)
36 2i2x_B MTAC, methyltransferase 88.9 1.2 4.1E-05 30.6 6.0 44 3-46 123-166 (258)
37 2qzs_A Glycogen synthase; glyc 88.8 0.61 2.1E-05 34.2 4.8 38 4-41 1-44 (485)
38 3zqu_A Probable aromatic acid 88.0 1.6 5.3E-05 29.2 5.9 45 3-48 4-48 (209)
39 3lrx_A Putative hydrogenase; a 87.3 0.79 2.7E-05 28.9 4.0 37 4-43 24-60 (158)
40 2yxb_A Coenzyme B12-dependent 87.0 1.2 4E-05 28.4 4.7 43 3-45 18-60 (161)
41 3hbm_A UDP-sugar hydrolase; PS 86.5 0.92 3.2E-05 31.6 4.3 26 12-41 13-38 (282)
42 3ezx_A MMCP 1, monomethylamine 85.8 2.1 7.1E-05 28.6 5.6 46 3-48 92-137 (215)
43 1g5t_A COB(I)alamin adenosyltr 85.8 5.8 0.0002 26.2 10.8 99 3-118 28-131 (196)
44 3vue_A GBSS-I, granule-bound s 85.5 1.1 3.8E-05 34.0 4.6 37 3-39 9-51 (536)
45 1pno_A NAD(P) transhydrogenase 84.9 1.8 6.3E-05 28.0 4.7 36 4-41 24-64 (180)
46 3qjg_A Epidermin biosynthesis 84.9 2 6.8E-05 27.9 5.0 42 4-46 6-47 (175)
47 1mvl_A PPC decarboxylase athal 84.1 2.2 7.5E-05 28.5 5.1 42 3-46 19-60 (209)
48 1v4v_A UDP-N-acetylglucosamine 83.9 8.9 0.0003 26.8 9.5 38 4-42 6-44 (376)
49 1d4o_A NADP(H) transhydrogenas 83.1 2.3 7.8E-05 27.6 4.6 36 4-41 23-63 (184)
50 2bru_C NAD(P) transhydrogenase 82.3 2.3 7.8E-05 27.6 4.4 36 4-41 31-71 (186)
51 2fsv_C NAD(P) transhydrogenase 82.3 2.5 8.5E-05 28.0 4.6 36 4-41 47-87 (203)
52 1djl_A Transhydrogenase DIII; 82.1 2.5 8.6E-05 28.0 4.6 36 4-41 46-86 (207)
53 2ejb_A Probable aromatic acid 81.5 4.1 0.00014 26.6 5.6 44 4-48 2-45 (189)
54 2hy7_A Glucuronosyltransferase 81.0 1.6 5.6E-05 31.5 3.8 36 3-40 14-52 (406)
55 1sbz_A Probable aromatic acid 79.3 4.7 0.00016 26.6 5.3 42 5-47 2-44 (197)
56 4b4o_A Epimerase family protei 79.1 2.7 9.1E-05 28.8 4.3 32 5-40 2-33 (298)
57 3mcu_A Dipicolinate synthase, 78.8 3.2 0.00011 27.6 4.4 41 2-43 4-45 (207)
58 3ot5_A UDP-N-acetylglucosamine 78.5 11 0.00036 27.3 7.5 41 1-42 25-67 (403)
59 3lyu_A Putative hydrogenase; t 77.3 2.8 9.5E-05 25.8 3.6 36 5-43 20-55 (142)
60 3lqk_A Dipicolinate synthase s 77.2 4.3 0.00015 26.9 4.7 41 3-44 7-48 (201)
61 1p3y_1 MRSD protein; flavoprot 76.2 2.3 7.8E-05 28.1 3.1 43 3-46 8-50 (194)
62 1qzu_A Hypothetical protein MD 74.1 3.9 0.00013 27.2 3.8 43 3-46 19-62 (206)
63 3bul_A Methionine synthase; tr 73.8 6.3 0.00022 30.4 5.4 43 3-45 98-140 (579)
64 1lss_A TRK system potassium up 73.8 8 0.00027 22.8 5.0 33 3-40 4-36 (140)
65 3dzc_A UDP-N-acetylglucosamine 73.4 22 0.00076 25.5 8.0 40 2-42 24-64 (396)
66 1kjn_A MTH0777; hypotethical p 73.1 5 0.00017 25.5 3.9 41 9-49 13-54 (157)
67 2r8r_A Sensor protein; KDPD, P 72.6 8.2 0.00028 26.1 5.1 38 4-41 7-44 (228)
68 1hdo_A Biliverdin IX beta redu 71.3 7.6 0.00026 24.5 4.7 36 1-40 1-36 (206)
69 3tov_A Glycosyl transferase fa 70.2 6.5 0.00022 27.9 4.5 46 2-47 7-54 (349)
70 3beo_A UDP-N-acetylglucosamine 69.8 4.3 0.00015 28.3 3.5 39 3-42 8-48 (375)
71 4hb9_A Similarities with proba 69.3 4.6 0.00016 28.5 3.6 29 4-37 2-30 (412)
72 2lpm_A Two-component response 68.9 5.7 0.00019 23.9 3.5 31 93-126 42-74 (123)
73 2gk4_A Conserved hypothetical 68.2 5.2 0.00018 27.1 3.4 26 14-41 28-53 (232)
74 3kkj_A Amine oxidase, flavin-c 67.9 3.9 0.00013 26.3 2.8 18 21-38 15-32 (336)
75 4dzz_A Plasmid partitioning pr 67.7 20 0.00069 22.6 9.5 30 11-40 10-39 (206)
76 3ghy_A Ketopantoate reductase 67.6 5.5 0.00019 28.0 3.7 41 1-46 1-41 (335)
77 1g63_A Epidermin modifying enz 67.1 11 0.00036 24.5 4.7 44 1-46 1-44 (181)
78 4g6h_A Rotenone-insensitive NA 67.0 3.3 0.00011 31.1 2.5 35 2-41 41-75 (502)
79 2vo1_A CTP synthase 1; pyrimid 66.6 13 0.00043 26.1 5.1 43 1-43 20-65 (295)
80 3eag_A UDP-N-acetylmuramate:L- 65.0 10 0.00035 26.6 4.6 33 4-40 5-37 (326)
81 3llv_A Exopolyphosphatase-rela 64.7 6.1 0.00021 23.7 3.0 33 4-41 7-39 (141)
82 1p9o_A Phosphopantothenoylcyst 64.3 5.3 0.00018 28.4 3.0 22 21-42 69-90 (313)
83 2g1u_A Hypothetical protein TM 64.2 13 0.00045 22.7 4.6 34 3-41 19-52 (155)
84 1bg6_A N-(1-D-carboxylethyl)-L 64.0 6.8 0.00023 27.5 3.6 35 1-40 2-36 (359)
85 3oy2_A Glycosyltransferase B73 63.6 9.1 0.00031 27.1 4.2 38 4-42 1-41 (413)
86 4da9_A Short-chain dehydrogena 63.4 32 0.0011 23.3 7.2 32 5-39 30-61 (280)
87 2z1m_A GDP-D-mannose dehydrata 62.9 9.7 0.00033 26.2 4.2 36 1-40 1-36 (345)
88 1psw_A ADP-heptose LPS heptosy 62.7 12 0.00041 26.0 4.6 43 4-46 1-45 (348)
89 1jx7_A Hypothetical protein YC 61.6 14 0.00049 21.3 4.2 29 15-43 16-46 (117)
90 3gpi_A NAD-dependent epimerase 61.3 18 0.00062 24.3 5.2 35 1-40 1-35 (286)
91 3ksu_A 3-oxoacyl-acyl carrier 61.0 33 0.0011 22.9 6.5 31 5-38 12-42 (262)
92 3pgx_A Carveol dehydrogenase; 60.9 35 0.0012 22.9 8.2 31 5-38 16-46 (280)
93 3fwz_A Inner membrane protein 60.5 8 0.00027 23.3 3.0 34 4-42 8-41 (140)
94 1ep3_B Dihydroorotate dehydrog 60.3 11 0.00037 25.4 3.9 37 4-42 111-147 (262)
95 2gt1_A Lipopolysaccharide hept 59.3 14 0.00049 25.5 4.5 43 4-46 1-45 (326)
96 4gi5_A Quinone reductase; prot 59.3 26 0.00088 24.3 5.7 38 1-38 20-60 (280)
97 3osu_A 3-oxoacyl-[acyl-carrier 58.5 36 0.0012 22.4 7.9 36 1-39 1-36 (246)
98 1vgv_A UDP-N-acetylglucosamine 58.2 14 0.00048 25.7 4.4 36 4-40 1-37 (384)
99 3mc3_A DSRE/DSRF-like family p 58.0 25 0.00086 21.2 5.0 38 5-42 17-57 (134)
100 3s28_A Sucrose synthase 1; gly 57.3 8.8 0.0003 30.9 3.4 37 4-40 279-340 (816)
101 2r85_A PURP protein PF1517; AT 56.9 19 0.00063 24.8 4.8 35 2-42 1-35 (334)
102 2qs7_A Uncharacterized protein 56.0 23 0.0008 21.7 4.7 42 5-46 9-51 (144)
103 1u7z_A Coenzyme A biosynthesis 55.9 12 0.00041 25.2 3.4 20 21-40 38-57 (226)
104 3to5_A CHEY homolog; alpha(5)b 55.4 10 0.00035 23.0 2.9 21 106-126 56-78 (134)
105 3kkl_A Probable chaperone prot 54.6 38 0.0013 22.8 5.8 41 1-41 1-52 (244)
106 2bi7_A UDP-galactopyranose mut 54.5 12 0.00041 26.9 3.5 35 1-40 1-35 (384)
107 2ew2_A 2-dehydropantoate 2-red 54.1 12 0.00042 25.5 3.4 34 2-40 2-35 (316)
108 3i6i_A Putative leucoanthocyan 53.4 19 0.00066 25.0 4.4 37 1-41 8-44 (346)
109 2xj4_A MIPZ; replication, cell 53.0 27 0.00091 23.8 5.0 41 1-41 1-43 (286)
110 2pia_A Phthalate dioxygenase r 52.9 17 0.00057 25.4 4.0 37 4-42 112-149 (321)
111 3gk3_A Acetoacetyl-COA reducta 52.8 48 0.0016 22.1 8.7 35 3-40 24-58 (269)
112 2qjw_A Uncharacterized protein 52.4 26 0.00089 21.0 4.5 38 1-38 2-40 (176)
113 3ew7_A LMO0794 protein; Q8Y8U8 52.0 13 0.00043 23.8 3.1 32 5-40 2-33 (221)
114 3alj_A 2-methyl-3-hydroxypyrid 52.0 14 0.00049 26.0 3.6 33 2-39 10-42 (379)
115 1y1p_A ARII, aldehyde reductas 51.6 25 0.00084 24.1 4.7 34 3-40 11-44 (342)
116 3zzm_A Bifunctional purine bio 51.6 79 0.0027 24.2 8.0 100 5-124 11-118 (523)
117 1qfj_A Protein (flavin reducta 51.4 21 0.00072 23.3 4.2 36 4-41 103-140 (232)
118 3la6_A Tyrosine-protein kinase 51.4 56 0.0019 22.4 9.5 38 4-41 92-131 (286)
119 1jzt_A Hypothetical 27.5 kDa p 51.4 12 0.00042 25.4 3.0 33 4-39 59-93 (246)
120 2hy5_A Putative sulfurtransfer 51.1 20 0.00069 21.4 3.7 29 15-43 15-44 (130)
121 3bfv_A CAPA1, CAPB2, membrane 51.0 55 0.0019 22.2 11.0 37 4-40 82-120 (271)
122 3oid_A Enoyl-[acyl-carrier-pro 51.0 28 0.00095 23.2 4.8 35 1-38 1-35 (258)
123 3e8x_A Putative NAD-dependent 50.9 13 0.00046 24.2 3.1 35 3-41 21-55 (236)
124 3s55_A Putative short-chain de 50.8 53 0.0018 22.0 7.9 32 5-39 11-42 (281)
125 3d3k_A Enhancer of mRNA-decapp 50.7 14 0.00048 25.3 3.2 34 4-40 86-121 (259)
126 2b69_A UDP-glucuronate decarbo 50.5 23 0.0008 24.4 4.4 33 3-39 27-59 (343)
127 3cio_A ETK, tyrosine-protein k 50.5 59 0.002 22.4 10.5 38 4-41 104-143 (299)
128 2cnd_A NADH-dependent nitrate 50.3 30 0.001 23.1 4.9 36 4-41 137-176 (270)
129 3pnx_A Putative sulfurtransfer 50.1 46 0.0016 21.0 5.4 48 1-48 2-50 (160)
130 3ruf_A WBGU; rossmann fold, UD 50.0 25 0.00084 24.3 4.5 35 2-40 24-58 (351)
131 2vou_A 2,6-dihydroxypyridine h 50.0 18 0.00063 25.7 3.9 33 2-39 4-36 (397)
132 2pzm_A Putative nucleotide sug 49.7 22 0.00074 24.5 4.2 33 3-39 20-52 (330)
133 2hmt_A YUAA protein; RCK, KTN, 49.6 12 0.0004 22.1 2.5 32 4-40 7-38 (144)
134 3h2s_A Putative NADH-flavin re 49.4 15 0.0005 23.6 3.1 32 5-40 2-33 (224)
135 3kjh_A CO dehydrogenase/acetyl 49.3 17 0.0006 23.6 3.5 36 5-40 2-37 (254)
136 4hwg_A UDP-N-acetylglucosamine 48.9 71 0.0024 22.9 8.4 29 15-44 20-48 (385)
137 1qyd_A Pinoresinol-lariciresin 48.8 24 0.00084 23.8 4.3 36 1-40 1-37 (313)
138 3lk7_A UDP-N-acetylmuramoylala 48.7 29 0.001 25.5 4.9 32 3-39 9-40 (451)
139 1qyc_A Phenylcoumaran benzylic 48.7 25 0.00084 23.8 4.3 36 1-40 1-37 (308)
140 3hwr_A 2-dehydropantoate 2-red 48.3 20 0.00067 25.0 3.7 41 3-48 19-59 (318)
141 3d3j_A Enhancer of mRNA-decapp 48.1 16 0.00054 25.8 3.2 34 4-40 133-168 (306)
142 3dm5_A SRP54, signal recogniti 48.1 31 0.001 25.7 4.9 39 5-43 102-140 (443)
143 2vrn_A Protease I, DR1199; cys 48.1 49 0.0017 20.8 6.4 40 1-41 7-46 (190)
144 3dhn_A NAD-dependent epimerase 48.0 23 0.00079 22.7 3.9 36 1-40 1-37 (227)
145 3slg_A PBGP3 protein; structur 48.0 21 0.0007 25.0 3.9 36 1-40 22-58 (372)
146 2ts1_A Tyrosyl-tRNA synthetase 47.9 23 0.00079 26.1 4.2 26 14-40 46-71 (419)
147 3s40_A Diacylglycerol kinase; 47.5 37 0.0013 23.5 5.0 42 1-42 8-50 (304)
148 2o8n_A APOA-I binding protein; 47.5 17 0.00058 25.1 3.2 34 4-40 80-115 (265)
149 3sc4_A Short chain dehydrogena 47.0 64 0.0022 21.8 8.4 33 5-40 10-42 (285)
150 1y42_X Tyrosyl-tRNA synthetase 47.0 17 0.00058 26.6 3.3 26 14-40 80-105 (392)
151 2c07_A 3-oxoacyl-(acyl-carrier 46.8 63 0.0022 21.7 7.1 18 21-38 58-75 (285)
152 3grp_A 3-oxoacyl-(acyl carrier 46.8 62 0.0021 21.6 7.8 33 5-40 28-60 (266)
153 1rkx_A CDP-glucose-4,6-dehydra 46.5 24 0.0008 24.5 4.0 35 2-40 8-42 (357)
154 3dqz_A Alpha-hydroxynitrIle ly 46.5 19 0.00065 23.0 3.3 38 1-39 1-39 (258)
155 3c6x_A Hydroxynitrilase; atomi 46.5 24 0.00083 23.1 3.9 38 1-39 1-38 (257)
156 2q2v_A Beta-D-hydroxybutyrate 46.3 60 0.0021 21.3 8.7 20 21-40 18-37 (255)
157 4f0j_A Probable hydrolytic enz 46.3 34 0.0012 22.4 4.6 36 4-40 47-82 (315)
158 3oz2_A Digeranylgeranylglycero 46.2 14 0.00049 25.7 2.8 17 21-37 17-33 (397)
159 1rw7_A YDR533CP; alpha-beta sa 45.7 64 0.0022 21.4 6.2 41 1-41 1-52 (243)
160 2pn1_A Carbamoylphosphate synt 45.7 41 0.0014 23.1 5.0 34 1-40 2-37 (331)
161 2a5l_A Trp repressor binding p 45.6 53 0.0018 20.6 5.3 41 1-41 3-44 (200)
162 1zcz_A Bifunctional purine bio 45.5 23 0.00078 26.6 3.7 37 19-66 25-61 (464)
163 3noh_A Putative peptide bindin 45.5 18 0.00061 22.1 2.6 18 21-38 78-95 (139)
164 3enk_A UDP-glucose 4-epimerase 45.4 38 0.0013 23.2 4.9 32 4-39 6-37 (341)
165 3dme_A Conserved exported prot 45.4 17 0.00059 25.1 3.1 32 4-40 5-36 (369)
166 3gl9_A Response regulator; bet 45.0 18 0.00061 20.7 2.7 30 94-126 36-67 (122)
167 4a9w_A Monooxygenase; baeyer-v 44.7 12 0.00041 25.7 2.2 35 1-40 1-35 (357)
168 2xdo_A TETX2 protein; tetracyc 44.6 22 0.00075 25.3 3.6 32 3-39 26-57 (398)
169 4as2_A Phosphorylcholine phosp 44.5 21 0.00071 25.3 3.4 25 17-41 145-169 (327)
170 3sty_A Methylketone synthase 1 44.3 43 0.0015 21.4 4.8 36 3-39 12-47 (267)
171 3c97_A Signal transduction his 44.1 33 0.0011 19.9 3.9 20 106-125 53-74 (140)
172 3c85_A Putative glutathione-re 44.0 20 0.00067 22.5 3.0 34 3-41 39-73 (183)
173 2ixd_A LMBE-related protein; h 44.0 38 0.0013 22.8 4.6 38 1-39 1-39 (242)
174 1xrs_B D-lysine 5,6-aminomutas 43.7 18 0.00062 24.9 2.9 46 3-48 120-174 (262)
175 1jil_A Tyrrs, tyrosyl-tRNA syn 43.7 22 0.00075 26.2 3.5 26 15-41 49-74 (420)
176 2g36_A Tryptophanyl-tRNA synth 43.6 17 0.00057 26.0 2.8 26 15-40 28-53 (340)
177 3qit_A CURM TE, polyketide syn 43.5 40 0.0014 21.5 4.6 35 4-39 27-61 (286)
178 4dll_A 2-hydroxy-3-oxopropiona 43.4 45 0.0015 23.1 5.0 32 4-40 32-63 (320)
179 1sb8_A WBPP; epimerase, 4-epim 43.3 28 0.00097 24.1 4.0 33 3-39 27-59 (352)
180 3f67_A Putative dienelactone h 43.1 57 0.0019 20.5 5.2 34 5-39 34-67 (241)
181 2l69_A Rossmann 2X3 fold prote 43.1 30 0.001 20.1 3.3 29 16-44 86-114 (134)
182 3hn2_A 2-dehydropantoate 2-red 43.1 28 0.00095 24.1 3.9 33 4-41 3-35 (312)
183 3a10_A Response regulator; pho 43.0 36 0.0012 18.8 3.9 13 106-118 44-56 (116)
184 3qlj_A Short chain dehydrogena 42.5 81 0.0028 21.7 8.5 32 5-39 28-59 (322)
185 2bw0_A 10-FTHFDH, 10-formyltet 42.3 59 0.002 23.0 5.5 34 1-39 20-53 (329)
186 1ehi_A LMDDL2, D-alanine:D-lac 42.3 28 0.00095 24.9 3.8 38 1-39 1-44 (377)
187 3of5_A Dethiobiotin synthetase 42.3 46 0.0016 22.0 4.7 37 2-38 2-40 (228)
188 2x5n_A SPRPN10, 26S proteasome 41.8 61 0.0021 20.8 5.1 34 6-39 110-143 (192)
189 1e2b_A Enzyme IIB-cellobiose; 41.6 50 0.0017 19.1 5.4 40 1-40 1-40 (106)
190 1e6u_A GDP-fucose synthetase; 41.6 20 0.00068 24.4 2.9 34 1-38 1-34 (321)
191 3f6p_A Transcriptional regulat 41.6 22 0.00076 20.1 2.8 23 94-119 36-58 (120)
192 1xgk_A Nitrogen metabolite rep 41.5 36 0.0012 23.9 4.3 34 3-40 5-38 (352)
193 2ehd_A Oxidoreductase, oxidore 41.3 25 0.00086 22.8 3.3 32 6-40 7-38 (234)
194 2dkn_A 3-alpha-hydroxysteroid 41.3 23 0.00078 23.1 3.1 19 21-39 15-33 (255)
195 3r3s_A Oxidoreductase; structu 41.3 81 0.0028 21.4 8.5 33 5-40 50-82 (294)
196 1tvc_A Methane monooxygenase c 41.3 26 0.0009 23.2 3.4 35 4-40 118-154 (250)
197 3tfo_A Putative 3-oxoacyl-(acy 41.2 48 0.0016 22.3 4.7 37 1-40 1-37 (264)
198 4e3z_A Putative oxidoreductase 41.2 53 0.0018 21.8 5.0 36 1-39 23-58 (272)
199 3vps_A TUNA, NAD-dependent epi 41.1 26 0.00088 23.7 3.4 34 3-40 7-40 (321)
200 1p6q_A CHEY2; chemotaxis, sign 40.9 45 0.0015 18.8 4.1 21 106-126 50-72 (129)
201 3dqp_A Oxidoreductase YLBE; al 40.9 18 0.00062 23.2 2.5 32 5-40 2-33 (219)
202 2ywl_A Thioredoxin reductase r 40.5 22 0.00076 21.9 2.8 21 20-40 13-33 (180)
203 3t6k_A Response regulator rece 40.5 21 0.00073 20.8 2.6 30 94-126 38-69 (136)
204 2cul_A Glucose-inhibited divis 40.4 26 0.00087 23.0 3.2 35 1-40 1-35 (232)
205 4e12_A Diketoreductase; oxidor 40.3 33 0.0011 23.4 3.8 35 1-40 2-36 (283)
206 3iwa_A FAD-dependent pyridine 40.3 24 0.00084 25.8 3.3 36 1-41 1-38 (472)
207 2qv0_A Protein MRKE; structura 40.2 44 0.0015 19.3 4.1 13 106-118 54-66 (143)
208 2eix_A NADH-cytochrome B5 redu 39.4 49 0.0017 21.6 4.5 35 4-40 117-154 (243)
209 4fu0_A D-alanine--D-alanine li 39.4 20 0.00068 25.4 2.7 36 1-37 1-41 (357)
210 3crn_A Response regulator rece 39.3 43 0.0015 19.1 3.9 13 106-118 46-58 (132)
211 2d1p_B TUSC, hypothetical UPF0 39.3 58 0.002 19.1 4.5 41 1-42 1-43 (119)
212 3grc_A Sensor protein, kinase; 39.2 26 0.0009 20.2 2.9 22 94-118 40-61 (140)
213 3cmu_A Protein RECA, recombina 39.1 97 0.0033 27.9 7.1 45 4-48 1082-1126(2050)
214 3sju_A Keto reductase; short-c 39.1 50 0.0017 22.2 4.6 35 3-40 23-57 (279)
215 2pnf_A 3-oxoacyl-[acyl-carrier 39.0 28 0.00097 22.6 3.3 33 5-40 8-40 (248)
216 1dhr_A Dihydropteridine reduct 38.7 26 0.0009 22.9 3.0 32 5-39 8-39 (241)
217 3vtf_A UDP-glucose 6-dehydroge 38.6 58 0.002 24.2 5.1 38 3-40 333-375 (444)
218 1cyd_A Carbonyl reductase; sho 38.6 29 0.001 22.5 3.3 20 21-40 21-40 (244)
219 2bka_A CC3, TAT-interacting pr 38.5 30 0.001 22.4 3.3 33 4-40 19-53 (242)
220 3d1c_A Flavin-containing putat 38.5 22 0.00074 24.7 2.7 36 1-41 2-38 (369)
221 4g65_A TRK system potassium up 38.4 9.6 0.00033 28.3 0.9 35 2-41 2-36 (461)
222 3f9i_A 3-oxoacyl-[acyl-carrier 38.3 29 0.001 22.7 3.3 33 5-40 15-47 (249)
223 1xhf_A DYE resistance, aerobic 38.3 47 0.0016 18.5 3.9 13 106-118 46-58 (123)
224 3awd_A GOX2181, putative polyo 38.1 30 0.001 22.8 3.3 20 21-40 27-46 (260)
225 2gkg_A Response regulator homo 38.0 30 0.001 19.3 3.0 12 107-118 49-60 (127)
226 1umk_A B5R, NADH-cytochrome B5 38.0 53 0.0018 21.9 4.6 36 4-41 147-185 (275)
227 3afn_B Carbonyl reductase; alp 37.8 30 0.001 22.6 3.3 33 5-40 8-40 (258)
228 2yva_A DNAA initiator-associat 37.7 67 0.0023 20.2 4.9 36 8-43 113-148 (196)
229 1nff_A Putative oxidoreductase 37.7 30 0.001 23.0 3.3 20 21-40 21-40 (260)
230 3l77_A Short-chain alcohol deh 37.7 31 0.0011 22.4 3.3 20 21-40 16-35 (235)
231 3kht_A Response regulator; PSI 37.7 31 0.0011 20.1 3.1 23 93-118 40-62 (144)
232 3eod_A Protein HNR; response r 37.7 30 0.001 19.7 2.9 22 94-118 41-62 (130)
233 2xhz_A KDSD, YRBH, arabinose 5 37.6 54 0.0018 20.3 4.3 34 10-43 102-135 (183)
234 1m3s_A Hypothetical protein YC 37.5 67 0.0023 20.0 4.8 34 10-43 85-118 (186)
235 3hn7_A UDP-N-acetylmuramate-L- 37.5 44 0.0015 25.1 4.4 32 4-39 20-51 (524)
236 3kd9_A Coenzyme A disulfide re 37.5 25 0.00084 25.6 3.0 36 1-41 1-38 (449)
237 2zat_A Dehydrogenase/reductase 37.4 31 0.001 22.9 3.3 33 5-40 15-47 (260)
238 2hy5_B Intracellular sulfur ox 37.4 51 0.0017 20.0 4.0 32 10-41 13-46 (136)
239 1iow_A DD-ligase, DDLB, D-ALA\ 37.4 88 0.003 21.0 5.7 39 1-40 1-43 (306)
240 3hh1_A Tetrapyrrole methylase 37.2 38 0.0013 19.8 3.3 17 22-38 70-86 (117)
241 3orf_A Dihydropteridine reduct 37.1 31 0.0011 22.8 3.3 20 21-40 36-55 (251)
242 2cfc_A 2-(R)-hydroxypropyl-COM 37.1 32 0.0011 22.5 3.3 20 21-40 16-35 (250)
243 3qiv_A Short-chain dehydrogena 37.1 29 0.00099 22.8 3.1 33 5-40 10-42 (253)
244 2wsb_A Galactitol dehydrogenas 37.0 32 0.0011 22.5 3.3 20 21-40 25-44 (254)
245 1zk4_A R-specific alcohol dehy 37.0 32 0.0011 22.5 3.3 20 21-40 20-39 (251)
246 3l6e_A Oxidoreductase, short-c 37.0 29 0.001 22.7 3.1 20 21-40 17-36 (235)
247 2yxn_A Tyrosyl-tRNA synthetase 36.9 34 0.0011 24.2 3.5 25 15-40 50-74 (322)
248 3r6d_A NAD-dependent epimerase 36.9 31 0.0011 22.1 3.1 31 6-40 8-39 (221)
249 1z82_A Glycerol-3-phosphate de 36.9 35 0.0012 23.8 3.6 32 4-40 15-46 (335)
250 1uls_A Putative 3-oxoacyl-acyl 36.9 32 0.0011 22.6 3.3 20 21-40 19-38 (245)
251 3ek2_A Enoyl-(acyl-carrier-pro 36.8 29 0.00099 23.0 3.1 20 21-40 30-49 (271)
252 3v8b_A Putative dehydrogenase, 36.8 96 0.0033 20.9 8.4 33 5-40 29-61 (283)
253 1fjh_A 3alpha-hydroxysteroid d 36.8 32 0.0011 22.6 3.3 19 21-39 15-33 (257)
254 1ooe_A Dihydropteridine reduct 36.7 26 0.00088 22.9 2.7 19 21-39 17-35 (236)
255 2jk1_A HUPR, hydrogenase trans 36.7 39 0.0013 19.5 3.4 13 106-118 43-55 (139)
256 3gd8_A Aquaporin-4; proton exc 36.7 11 0.00039 25.2 0.9 16 15-30 63-78 (223)
257 2ph3_A 3-oxoacyl-[acyl carrier 36.6 27 0.00092 22.7 2.8 17 21-37 15-31 (245)
258 2o23_A HADH2 protein; HSD17B10 36.6 32 0.0011 22.6 3.3 20 21-40 26-45 (265)
259 2uvd_A 3-oxoacyl-(acyl-carrier 36.6 33 0.0011 22.6 3.3 32 5-39 5-36 (246)
260 3nhm_A Response regulator; pro 36.5 32 0.0011 19.6 2.9 22 94-118 37-58 (133)
261 3tnj_A Universal stress protei 36.5 65 0.0022 18.9 5.2 40 1-40 3-43 (150)
262 3ihm_A Styrene monooxygenase A 36.4 28 0.00094 25.2 3.1 31 5-40 24-54 (430)
263 2pd6_A Estradiol 17-beta-dehyd 36.4 33 0.0011 22.6 3.3 20 21-40 21-40 (264)
264 3imf_A Short chain dehydrogena 36.3 30 0.001 23.0 3.1 33 5-40 7-39 (257)
265 3i1j_A Oxidoreductase, short c 36.3 33 0.0011 22.4 3.3 33 5-40 15-47 (247)
266 2o9g_A Aquaporin Z; integral m 36.3 12 0.00039 25.3 0.9 16 15-30 63-78 (234)
267 2gdz_A NAD+-dependent 15-hydro 36.2 33 0.0011 22.8 3.3 33 5-40 8-40 (267)
268 3zxs_A Cryptochrome B, rscryb; 36.2 38 0.0013 25.8 3.8 23 16-38 65-87 (522)
269 3i4f_A 3-oxoacyl-[acyl-carrier 36.2 30 0.001 22.9 3.1 33 5-40 8-40 (264)
270 1vl8_A Gluconate 5-dehydrogena 36.1 33 0.0011 23.0 3.3 33 5-40 22-54 (267)
271 4e5v_A Putative THUA-like prot 36.1 63 0.0021 22.3 4.7 37 3-40 4-43 (281)
272 2f2b_A Aquaporin AQPM; protein 36.1 12 0.0004 25.5 0.9 17 14-30 78-94 (246)
273 2ekp_A 2-deoxy-D-gluconate 3-d 36.1 34 0.0012 22.4 3.3 20 21-40 16-35 (239)
274 1o5i_A 3-oxoacyl-(acyl carrier 36.1 33 0.0011 22.6 3.3 20 21-40 33-52 (249)
275 3cgv_A Geranylgeranyl reductas 36.1 16 0.00054 25.7 1.7 35 1-40 2-36 (397)
276 3lzw_A Ferredoxin--NADP reduct 36.0 16 0.00055 24.8 1.7 31 5-40 9-39 (332)
277 1dz3_A Stage 0 sporulation pro 36.0 32 0.0011 19.6 2.9 11 107-117 48-58 (130)
278 4e6p_A Probable sorbitol dehyd 35.9 31 0.0011 22.9 3.1 33 5-40 9-41 (259)
279 3dii_A Short-chain dehydrogena 35.9 31 0.0011 22.7 3.1 20 21-40 16-35 (247)
280 3jx9_A Putative phosphoheptose 35.9 22 0.00075 22.8 2.2 25 18-42 90-115 (170)
281 1iy8_A Levodione reductase; ox 35.9 31 0.001 23.0 3.1 20 21-40 27-46 (267)
282 3l4e_A Uncharacterized peptida 35.8 56 0.0019 21.3 4.3 35 3-37 27-63 (206)
283 1dbw_A Transcriptional regulat 35.8 48 0.0016 18.7 3.6 11 107-117 47-57 (126)
284 1jmt_B Splicing factor U2AF 65 35.8 15 0.00052 16.2 1.0 14 9-22 10-23 (28)
285 4e21_A 6-phosphogluconate dehy 35.7 29 0.001 24.8 3.0 35 1-40 20-54 (358)
286 1zi8_A Carboxymethylenebutenol 35.7 80 0.0027 19.7 5.2 33 6-39 31-63 (236)
287 1kht_A Adenylate kinase; phosp 35.7 59 0.002 20.0 4.3 41 1-41 1-41 (192)
288 2bgk_A Rhizome secoisolaricire 35.7 31 0.0011 22.9 3.1 20 21-40 30-49 (278)
289 2hq1_A Glucose/ribitol dehydro 35.7 32 0.0011 22.4 3.1 18 21-38 19-36 (247)
290 3sho_A Transcriptional regulat 35.6 68 0.0023 19.9 4.6 36 8-43 91-126 (187)
291 2hun_A 336AA long hypothetical 35.6 41 0.0014 23.0 3.8 35 1-39 1-37 (336)
292 1mxh_A Pteridine reductase 2; 35.6 34 0.0012 22.8 3.3 32 5-39 12-43 (276)
293 3ius_A Uncharacterized conserv 35.6 25 0.00085 23.5 2.6 33 4-41 6-38 (286)
294 2fwm_X 2,3-dihydro-2,3-dihydro 35.6 34 0.0012 22.5 3.3 19 21-39 21-39 (250)
295 2ew8_A (S)-1-phenylethanol deh 35.5 35 0.0012 22.5 3.3 33 5-40 8-40 (249)
296 3ing_A Homoserine dehydrogenas 35.4 66 0.0023 22.7 4.8 37 4-40 83-119 (325)
297 3cz5_A Two-component response 35.4 55 0.0019 19.2 4.0 12 106-117 50-61 (153)
298 2ag5_A DHRS6, dehydrogenase/re 35.4 35 0.0012 22.4 3.3 32 5-39 7-38 (246)
299 1hdc_A 3-alpha, 20 beta-hydrox 35.4 35 0.0012 22.6 3.3 20 21-40 19-38 (254)
300 3lyl_A 3-oxoacyl-(acyl-carrier 35.3 35 0.0012 22.3 3.3 33 5-40 6-38 (247)
301 2yvu_A Probable adenylyl-sulfa 35.3 79 0.0027 19.5 5.1 37 4-40 14-50 (186)
302 4ehi_A Bifunctional purine bio 35.3 43 0.0015 25.6 3.9 30 18-49 35-64 (534)
303 1qsg_A Enoyl-[acyl-carrier-pro 35.2 32 0.0011 22.9 3.1 34 5-40 10-44 (265)
304 2xxa_A Signal recognition part 35.2 69 0.0024 23.5 5.0 39 5-43 102-141 (433)
305 3o26_A Salutaridine reductase; 35.1 34 0.0012 23.0 3.3 34 4-40 12-45 (311)
306 3cg4_A Response regulator rece 35.1 47 0.0016 19.1 3.6 22 94-118 41-62 (142)
307 3tox_A Short chain dehydrogena 35.1 1E+02 0.0035 20.7 8.1 32 5-39 9-40 (280)
308 3d3w_A L-xylulose reductase; u 35.1 36 0.0012 22.1 3.3 20 21-40 21-40 (244)
309 3m6m_D Sensory/regulatory prot 35.1 29 0.00099 20.4 2.6 20 106-125 57-78 (143)
310 3h7a_A Short chain dehydrogena 35.1 32 0.0011 22.8 3.1 33 5-40 8-40 (252)
311 2zbw_A Thioredoxin reductase; 35.1 27 0.00092 23.9 2.7 32 4-40 6-37 (335)
312 3c3m_A Response regulator rece 35.1 47 0.0016 19.2 3.6 12 107-118 47-58 (138)
313 3oig_A Enoyl-[acyl-carrier-pro 35.1 32 0.0011 22.8 3.1 20 21-40 23-42 (266)
314 1xq1_A Putative tropinone redu 35.0 35 0.0012 22.5 3.3 20 21-40 28-47 (266)
315 3ai3_A NADPH-sorbose reductase 35.0 35 0.0012 22.6 3.3 33 5-40 8-40 (263)
316 1hxh_A 3BETA/17BETA-hydroxyste 35.0 32 0.0011 22.7 3.1 19 21-39 20-38 (253)
317 4hv4_A UDP-N-acetylmuramate--L 35.0 73 0.0025 23.7 5.2 31 4-38 23-53 (494)
318 2z1n_A Dehydrogenase; reductas 35.0 35 0.0012 22.6 3.3 20 21-40 21-40 (260)
319 1g3q_A MIND ATPase, cell divis 35.0 56 0.0019 21.0 4.2 36 6-41 5-41 (237)
320 1uay_A Type II 3-hydroxyacyl-C 34.9 26 0.0009 22.7 2.6 19 21-39 16-34 (242)
321 3p0j_A Tyrosyl-tRNA synthetase 34.9 45 0.0015 26.4 4.1 39 4-42 383-426 (690)
322 3c96_A Flavin-containing monoo 34.9 33 0.0011 24.4 3.2 34 1-39 2-36 (410)
323 3ak4_A NADH-dependent quinucli 34.9 36 0.0012 22.6 3.3 33 5-40 13-45 (263)
324 2qcu_A Aerobic glycerol-3-phos 34.9 28 0.00097 25.8 3.0 35 1-40 1-35 (501)
325 2d1y_A Hypothetical protein TT 34.8 36 0.0012 22.5 3.3 20 21-40 20-39 (256)
326 2a9o_A Response regulator; ess 34.8 42 0.0014 18.6 3.2 12 107-118 45-56 (120)
327 3cu5_A Two component transcrip 34.8 48 0.0017 19.3 3.6 13 106-118 48-60 (141)
328 2pk3_A GDP-6-deoxy-D-LYXO-4-he 34.8 32 0.0011 23.3 3.1 25 13-39 20-44 (321)
329 3pxx_A Carveol dehydrogenase; 34.7 32 0.0011 23.0 3.1 32 5-39 11-42 (287)
330 2jah_A Clavulanic acid dehydro 34.7 36 0.0012 22.4 3.3 20 21-40 21-40 (247)
331 3f1l_A Uncharacterized oxidore 34.7 33 0.0011 22.7 3.1 33 5-40 13-45 (252)
332 1cqx_A Flavohemoprotein; globi 34.6 56 0.0019 23.3 4.4 35 5-41 268-303 (403)
333 3op4_A 3-oxoacyl-[acyl-carrier 34.6 33 0.0011 22.6 3.1 33 5-40 10-42 (248)
334 2ae2_A Protein (tropinone redu 34.6 36 0.0012 22.5 3.3 33 5-40 10-42 (260)
335 2qzj_A Two-component response 34.6 38 0.0013 19.6 3.1 13 106-118 47-59 (136)
336 2iz1_A 6-phosphogluconate dehy 34.6 32 0.0011 25.5 3.2 35 1-40 3-37 (474)
337 2vsy_A XCC0866; transferase, g 34.6 64 0.0022 23.9 4.9 38 3-40 205-246 (568)
338 1j4n_A Aquaporin 1; membrane p 34.6 12 0.00042 25.8 0.9 17 14-30 74-90 (271)
339 4iiu_A 3-oxoacyl-[acyl-carrier 34.5 36 0.0012 22.6 3.3 33 5-40 27-59 (267)
340 3n74_A 3-ketoacyl-(acyl-carrie 34.4 34 0.0011 22.6 3.1 33 5-40 10-42 (261)
341 2d1p_A TUSD, hypothetical UPF0 34.4 80 0.0027 19.3 5.2 35 8-42 18-55 (140)
342 3cnb_A DNA-binding response re 34.3 51 0.0017 18.9 3.6 11 107-117 54-64 (143)
343 1fmc_A 7 alpha-hydroxysteroid 34.3 34 0.0012 22.4 3.0 32 6-40 13-44 (255)
344 3end_A Light-independent proto 34.2 68 0.0023 21.8 4.7 35 6-40 44-78 (307)
345 2c29_D Dihydroflavonol 4-reduc 34.2 33 0.0011 23.5 3.1 25 13-39 13-37 (337)
346 1geg_A Acetoin reductase; SDR 34.2 37 0.0013 22.4 3.3 20 21-40 16-35 (256)
347 3kl4_A SRP54, signal recogniti 34.2 58 0.002 24.1 4.5 38 6-43 100-137 (433)
348 3cfy_A Putative LUXO repressor 34.2 41 0.0014 19.5 3.2 12 107-118 48-59 (137)
349 1ja9_A 4HNR, 1,3,6,8-tetrahydr 34.2 37 0.0013 22.4 3.3 31 6-39 23-53 (274)
350 4ao6_A Esterase; hydrolase, th 34.1 51 0.0017 21.7 3.9 36 5-40 57-94 (259)
351 3v2h_A D-beta-hydroxybutyrate 34.1 34 0.0012 23.2 3.1 32 5-39 26-57 (281)
352 3un1_A Probable oxidoreductase 34.0 34 0.0012 22.8 3.1 32 5-39 29-60 (260)
353 3ged_A Short-chain dehydrogena 34.0 1.1E+02 0.0036 20.6 8.3 32 6-40 4-35 (247)
354 3gem_A Short chain dehydrogena 34.0 31 0.001 23.1 2.8 33 5-40 28-60 (260)
355 3i7m_A XAA-Pro dipeptidase; st 34.0 31 0.001 20.6 2.6 34 15-48 1-34 (140)
356 1yrb_A ATP(GTP)binding protein 34.0 81 0.0028 20.6 4.9 37 4-41 15-51 (262)
357 3rd5_A Mypaa.01249.C; ssgcid, 34.0 37 0.0013 23.0 3.3 33 5-40 17-49 (291)
358 1spx_A Short-chain reductase f 34.0 37 0.0013 22.7 3.3 33 5-40 7-39 (278)
359 1gee_A Glucose 1-dehydrogenase 34.0 38 0.0013 22.3 3.3 32 5-39 8-39 (261)
360 3kyj_B CHEY6 protein, putative 34.0 37 0.0013 19.8 3.0 23 94-118 49-71 (145)
361 1cp2_A CP2, nitrogenase iron p 33.9 63 0.0021 21.3 4.4 35 6-40 4-38 (269)
362 3b2n_A Uncharacterized protein 33.9 43 0.0015 19.2 3.2 12 107-118 49-60 (133)
363 2nwq_A Probable short-chain de 33.9 37 0.0013 22.9 3.3 33 5-40 22-54 (272)
364 2x4g_A Nucleoside-diphosphate- 33.9 34 0.0012 23.4 3.1 32 5-40 15-46 (342)
365 2uzz_A N-methyl-L-tryptophan o 33.8 30 0.001 24.1 2.8 19 21-39 15-33 (372)
366 4fs3_A Enoyl-[acyl-carrier-pro 33.8 35 0.0012 22.8 3.1 33 5-40 7-41 (256)
367 1tmy_A CHEY protein, TMY; chem 33.8 40 0.0014 18.7 3.0 11 107-117 47-57 (120)
368 1edo_A Beta-keto acyl carrier 33.8 35 0.0012 22.1 3.1 18 21-38 15-32 (244)
369 3asu_A Short-chain dehydrogena 33.8 38 0.0013 22.4 3.3 20 21-40 14-33 (248)
370 2bon_A Lipid kinase; DAG kinas 33.8 75 0.0026 22.2 4.9 33 6-40 34-66 (332)
371 3ppi_A 3-hydroxyacyl-COA dehyd 33.8 34 0.0012 22.9 3.1 33 5-40 31-63 (281)
372 4dim_A Phosphoribosylglycinami 33.8 61 0.0021 23.0 4.5 36 1-41 5-40 (403)
373 3i42_A Response regulator rece 33.8 65 0.0022 18.0 4.7 38 1-42 1-38 (127)
374 1xkq_A Short-chain reductase f 33.8 38 0.0013 22.8 3.3 33 5-40 7-39 (280)
375 3dkr_A Esterase D; alpha beta 33.8 57 0.002 20.3 4.1 34 5-39 24-57 (251)
376 4e7p_A Response regulator; DNA 33.7 37 0.0013 20.0 3.0 30 93-125 55-86 (150)
377 3o38_A Short chain dehydrogena 33.7 38 0.0013 22.4 3.3 20 21-40 37-56 (266)
378 1x1t_A D(-)-3-hydroxybutyrate 33.7 35 0.0012 22.6 3.1 33 5-40 5-37 (260)
379 3m1a_A Putative dehydrogenase; 33.6 38 0.0013 22.7 3.3 33 5-40 6-38 (281)
380 3edm_A Short chain dehydrogena 33.6 35 0.0012 22.7 3.1 31 5-38 9-39 (259)
381 1c0p_A D-amino acid oxidase; a 33.6 33 0.0011 23.8 3.1 31 4-39 7-37 (363)
382 2dtx_A Glucose 1-dehydrogenase 33.6 38 0.0013 22.6 3.3 19 21-39 22-40 (264)
383 1e4e_A Vancomycin/teicoplanin 33.6 32 0.0011 24.0 3.0 38 1-39 1-43 (343)
384 3lte_A Response regulator; str 33.6 33 0.0011 19.5 2.7 22 94-118 40-61 (132)
385 3sx2_A Putative 3-ketoacyl-(ac 33.6 35 0.0012 22.8 3.1 32 5-39 14-45 (278)
386 1jbe_A Chemotaxis protein CHEY 33.6 55 0.0019 18.3 3.7 13 106-118 48-60 (128)
387 2rjn_A Response regulator rece 33.6 52 0.0018 19.4 3.6 13 106-118 50-62 (154)
388 1zem_A Xylitol dehydrogenase; 33.6 39 0.0013 22.5 3.3 33 5-40 8-40 (262)
389 3n0r_A Response regulator; sig 33.5 29 0.00099 23.8 2.7 22 94-118 195-216 (286)
390 3hyw_A Sulfide-quinone reducta 33.5 38 0.0013 24.5 3.4 35 1-41 1-37 (430)
391 3guy_A Short-chain dehydrogena 33.5 35 0.0012 22.1 3.0 20 21-40 15-34 (230)
392 2rh8_A Anthocyanidin reductase 33.5 35 0.0012 23.4 3.1 31 5-39 11-41 (338)
393 1uzm_A 3-oxoacyl-[acyl-carrier 33.5 39 0.0013 22.2 3.3 32 5-39 16-47 (247)
394 3ko8_A NAD-dependent epimerase 33.5 32 0.0011 23.2 2.9 19 21-39 14-32 (312)
395 3pk0_A Short-chain dehydrogena 33.5 35 0.0012 22.7 3.1 33 5-40 11-43 (262)
396 3c02_A Aquaglyceroporin; membr 33.4 14 0.00046 25.4 0.9 17 14-30 66-82 (258)
397 4huj_A Uncharacterized protein 33.4 27 0.00093 22.8 2.4 32 3-39 23-54 (220)
398 1rcu_A Conserved hypothetical 33.4 1E+02 0.0034 20.1 5.3 33 4-36 24-63 (195)
399 1fdr_A Flavodoxin reductase; f 33.4 38 0.0013 22.2 3.2 35 4-40 107-143 (248)
400 3tzq_B Short-chain type dehydr 33.3 36 0.0012 22.8 3.1 33 5-40 12-44 (271)
401 3k96_A Glycerol-3-phosphate de 33.3 28 0.00097 24.8 2.6 33 3-40 29-61 (356)
402 1h5q_A NADP-dependent mannitol 33.3 31 0.0011 22.7 2.7 19 21-39 28-46 (265)
403 2qq5_A DHRS1, dehydrogenase/re 33.3 36 0.0012 22.6 3.1 32 5-39 6-37 (260)
404 2v3c_C SRP54, signal recogniti 33.2 53 0.0018 24.2 4.1 38 5-42 101-138 (432)
405 4a1f_A DNAB helicase, replicat 33.1 1.2E+02 0.004 21.5 5.8 43 6-48 49-91 (338)
406 2p4h_X Vestitone reductase; NA 33.1 32 0.0011 23.3 2.8 18 21-38 15-32 (322)
407 1hyq_A MIND, cell division inh 33.1 66 0.0022 21.2 4.4 32 10-41 10-41 (263)
408 4eso_A Putative oxidoreductase 33.0 36 0.0012 22.6 3.1 33 5-40 9-41 (255)
409 3uf0_A Short-chain dehydrogena 33.0 57 0.002 21.9 4.1 33 5-40 32-64 (273)
410 1wek_A Hypothetical protein TT 33.0 66 0.0023 21.3 4.3 33 4-36 38-74 (217)
411 1h3f_A Tyrosyl-tRNA synthetase 32.9 37 0.0012 25.2 3.2 27 15-42 54-80 (432)
412 3gt7_A Sensor protein; structu 32.9 34 0.0012 20.3 2.7 29 94-125 41-71 (154)
413 1ldf_A Glycerol uptake facilit 32.9 15 0.00053 25.4 1.2 17 14-30 64-80 (281)
414 2p91_A Enoyl-[acyl-carrier-pro 32.8 40 0.0014 22.7 3.3 34 5-40 22-56 (285)
415 3lap_A Arginine repressor; arg 32.8 15 0.00051 23.6 1.0 25 21-45 38-62 (170)
416 4egf_A L-xylulose reductase; s 32.8 37 0.0013 22.7 3.1 33 5-40 21-53 (266)
417 3c1o_A Eugenol synthase; pheny 32.8 32 0.0011 23.4 2.8 34 4-41 5-38 (321)
418 1x92_A APC5045, phosphoheptose 32.8 90 0.0031 19.6 4.9 35 9-43 118-152 (199)
419 1xfi_A Unknown protein; struct 32.7 42 0.0014 24.3 3.4 37 4-40 213-250 (367)
420 3tpc_A Short chain alcohol deh 32.7 37 0.0013 22.4 3.1 32 5-39 8-39 (257)
421 2a4k_A 3-oxoacyl-[acyl carrier 32.7 40 0.0014 22.5 3.3 20 21-40 20-39 (263)
422 3fbs_A Oxidoreductase; structu 32.7 33 0.0011 22.8 2.8 31 4-39 3-33 (297)
423 1y56_B Sarcosine oxidase; dehy 32.7 32 0.0011 24.1 2.8 32 4-40 6-37 (382)
424 3cg0_A Response regulator rece 32.6 40 0.0014 19.3 2.9 11 107-117 54-64 (140)
425 1w6u_A 2,4-dienoyl-COA reducta 32.6 40 0.0014 22.8 3.3 20 21-40 40-59 (302)
426 2ip1_A Tryptophanyl-tRNA synth 32.6 32 0.0011 25.5 2.9 25 15-40 119-144 (432)
427 4iin_A 3-ketoacyl-acyl carrier 32.6 41 0.0014 22.5 3.3 32 5-39 30-61 (271)
428 4dlp_A Aminoacyl-tRNA syntheta 32.6 70 0.0024 24.1 4.8 26 15-40 43-71 (536)
429 1xx6_A Thymidine kinase; NESG, 32.6 99 0.0034 19.8 5.3 38 3-40 7-45 (191)
430 3rp8_A Flavoprotein monooxygen 32.5 35 0.0012 24.2 3.1 32 3-39 23-54 (407)
431 3axb_A Putative oxidoreductase 32.5 16 0.00055 26.4 1.3 34 1-39 21-55 (448)
432 1zmo_A Halohydrin dehalogenase 32.5 29 0.001 22.8 2.5 17 21-37 15-31 (244)
433 3nhv_A BH2092 protein; alpha-b 32.5 84 0.0029 18.9 4.6 35 4-40 73-107 (144)
434 2w2e_A AQY1, aquaporin, aquapo 32.5 14 0.00049 25.6 0.9 17 14-30 108-124 (279)
435 3ucx_A Short chain dehydrogena 32.4 38 0.0013 22.6 3.1 33 5-40 12-44 (264)
436 1wcv_1 SOJ, segregation protei 32.4 61 0.0021 21.4 4.1 38 4-41 6-45 (257)
437 2nm0_A Probable 3-oxacyl-(acyl 32.4 42 0.0014 22.3 3.3 19 21-39 35-53 (253)
438 3hv2_A Response regulator/HD d 32.4 34 0.0012 20.3 2.6 22 94-118 48-69 (153)
439 2pid_A Tyrosyl-tRNA synthetase 32.4 43 0.0015 24.0 3.5 25 15-40 63-87 (356)
440 3lf2_A Short chain oxidoreduct 32.4 38 0.0013 22.6 3.1 33 5-40 9-41 (265)
441 3vtz_A Glucose 1-dehydrogenase 32.4 38 0.0013 22.8 3.1 32 5-39 15-46 (269)
442 1xg5_A ARPG836; short chain de 32.4 41 0.0014 22.5 3.3 20 21-40 46-65 (279)
443 1uxo_A YDEN protein; hydrolase 32.4 85 0.0029 19.0 4.7 36 3-40 4-42 (192)
444 2gf3_A MSOX, monomeric sarcosi 32.3 32 0.0011 24.0 2.8 31 4-39 4-34 (389)
445 1yde_A Retinal dehydrogenase/r 32.3 38 0.0013 22.7 3.1 20 21-40 23-42 (270)
446 3i3l_A Alkylhalidase CMLS; fla 32.3 47 0.0016 25.4 3.9 35 1-40 21-55 (591)
447 2q3e_A UDP-glucose 6-dehydroge 32.3 80 0.0027 23.3 5.0 38 3-40 329-371 (467)
448 1yb1_A 17-beta-hydroxysteroid 32.3 41 0.0014 22.5 3.3 20 21-40 45-64 (272)
449 4dqx_A Probable oxidoreductase 32.2 38 0.0013 22.9 3.1 33 5-40 28-60 (277)
450 2ydy_A Methionine adenosyltran 32.2 31 0.001 23.4 2.6 30 5-38 4-33 (315)
451 3ftp_A 3-oxoacyl-[acyl-carrier 32.2 38 0.0013 22.8 3.1 33 5-40 29-61 (270)
452 1yxm_A Pecra, peroxisomal tran 32.1 41 0.0014 22.7 3.3 20 21-40 32-51 (303)
453 3hdg_A Uncharacterized protein 32.1 29 0.001 19.9 2.2 13 106-118 50-62 (137)
454 3nrc_A Enoyl-[acyl-carrier-pro 32.1 42 0.0014 22.6 3.3 34 5-41 27-62 (280)
455 1rpn_A GDP-mannose 4,6-dehydra 32.0 38 0.0013 23.1 3.1 33 4-40 15-47 (335)
456 3icc_A Putative 3-oxoacyl-(acy 32.0 1.1E+02 0.0036 19.9 5.7 33 4-39 7-39 (255)
457 3ea0_A ATPase, para family; al 32.0 74 0.0025 20.5 4.4 39 3-41 3-44 (245)
458 2jan_A Tyrosyl-tRNA synthetase 31.9 51 0.0017 24.5 3.8 25 15-40 49-73 (432)
459 3t4x_A Oxidoreductase, short c 31.9 39 0.0013 22.6 3.1 33 5-40 11-43 (267)
460 3rkr_A Short chain oxidoreduct 31.9 43 0.0015 22.2 3.3 33 5-40 30-62 (262)
461 2afh_E Nitrogenase iron protei 31.8 77 0.0026 21.3 4.6 35 6-40 5-39 (289)
462 3sxp_A ADP-L-glycero-D-mannohe 31.7 59 0.002 22.6 4.1 33 3-39 10-44 (362)
463 4dmm_A 3-oxoacyl-[acyl-carrier 31.7 43 0.0015 22.5 3.3 32 5-39 29-60 (269)
464 4dyv_A Short-chain dehydrogena 31.7 39 0.0013 22.8 3.1 33 5-40 29-61 (272)
465 1g0o_A Trihydroxynaphthalene r 31.7 43 0.0015 22.5 3.3 33 5-40 30-62 (283)
466 1d7o_A Enoyl-[acyl-carrier pro 31.7 39 0.0013 22.9 3.1 31 5-38 9-41 (297)
467 3qha_A Putative oxidoreductase 31.6 39 0.0013 23.1 3.1 33 3-40 15-47 (296)
468 3m2p_A UDP-N-acetylglucosamine 31.6 39 0.0013 22.9 3.1 33 4-40 3-35 (311)
469 1zmt_A Haloalcohol dehalogenas 31.5 31 0.0011 22.8 2.5 19 21-39 15-33 (254)
470 4gxt_A A conserved functionall 31.5 48 0.0016 24.0 3.6 25 17-41 223-247 (385)
471 1ae1_A Tropinone reductase-I; 31.5 43 0.0015 22.4 3.3 20 21-40 35-54 (273)
472 2b4q_A Rhamnolipids biosynthes 31.4 40 0.0014 22.7 3.1 20 21-40 43-62 (276)
473 3rqi_A Response regulator prot 31.4 32 0.0011 21.3 2.4 29 94-125 41-71 (184)
474 1e7w_A Pteridine reductase; di 31.4 43 0.0015 22.7 3.3 31 5-38 10-40 (291)
475 3e03_A Short chain dehydrogena 31.4 44 0.0015 22.4 3.3 33 5-40 7-39 (274)
476 3fgn_A Dethiobiotin synthetase 31.3 78 0.0027 21.4 4.5 34 5-38 27-62 (251)
477 3jqq_A Ferredoxin NADP reducta 31.3 49 0.0017 23.0 3.6 36 4-41 171-218 (316)
478 2oln_A NIKD protein; flavoprot 31.3 34 0.0012 24.1 2.8 31 4-39 5-35 (397)
479 3q9l_A Septum site-determining 31.3 64 0.0022 21.1 4.0 31 11-41 11-41 (260)
480 2y0c_A BCEC, UDP-glucose dehyd 31.2 87 0.003 23.3 5.1 38 3-40 328-370 (478)
481 1xu9_A Corticosteroid 11-beta- 31.2 44 0.0015 22.5 3.3 20 21-40 42-61 (286)
482 4imr_A 3-oxoacyl-(acyl-carrier 31.2 40 0.0014 22.7 3.1 33 5-40 34-66 (275)
483 3rwb_A TPLDH, pyridoxal 4-dehy 31.2 41 0.0014 22.2 3.1 32 5-39 7-38 (247)
484 3tsc_A Putative oxidoreductase 31.1 41 0.0014 22.6 3.1 31 5-38 12-42 (277)
485 2pd4_A Enoyl-[acyl-carrier-pro 31.0 40 0.0014 22.5 3.0 34 5-40 7-41 (275)
486 3ijr_A Oxidoreductase, short c 31.0 40 0.0014 22.9 3.1 33 5-40 48-80 (291)
487 3f5d_A Protein YDEA; unknow pr 31.0 54 0.0019 21.3 3.6 41 1-42 1-42 (206)
488 1ryi_A Glycine oxidase; flavop 31.0 35 0.0012 23.8 2.8 31 5-40 19-49 (382)
489 3r1i_A Short-chain type dehydr 31.0 41 0.0014 22.7 3.1 20 21-40 46-65 (276)
490 1yvv_A Amine oxidase, flavin-c 30.9 36 0.0012 23.2 2.8 30 5-39 4-33 (336)
491 2zz9_A Aquaporin-4; water tran 30.9 15 0.0005 25.9 0.8 17 14-30 71-87 (301)
492 2rk3_A Protein DJ-1; parkinson 30.8 1E+02 0.0035 19.5 6.2 40 1-41 1-40 (197)
493 4dry_A 3-oxoacyl-[acyl-carrier 30.8 41 0.0014 22.8 3.1 33 5-40 34-66 (281)
494 3uve_A Carveol dehydrogenase ( 30.7 41 0.0014 22.6 3.1 31 5-38 12-42 (286)
495 3sbx_A Putative uncharacterize 30.7 1.1E+02 0.0038 19.8 5.2 32 4-36 14-49 (189)
496 3zv4_A CIS-2,3-dihydrobiphenyl 30.5 42 0.0014 22.6 3.1 32 5-39 6-37 (281)
497 1r6t_A Tryptophanyl-tRNA synth 30.4 36 0.0012 25.6 2.9 27 15-42 172-199 (477)
498 1srr_A SPO0F, sporulation resp 30.4 46 0.0016 18.6 2.9 11 107-117 47-57 (124)
499 3l4b_C TRKA K+ channel protien 30.4 36 0.0012 22.0 2.6 32 5-41 2-33 (218)
500 2pl1_A Transcriptional regulat 30.4 46 0.0016 18.4 2.9 22 94-118 34-55 (121)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=99.94 E-value=1.5e-26 Score=173.08 Aligned_cols=123 Identities=20% Similarity=0.314 Sum_probs=90.2
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCC--CeEEEEeCcchhhhhhhhhccCCCCCCCceEEecCCCCCCCCC-CCCHH
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHG--FRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGMEPWED-RNDFG 79 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG--~~Vt~~~t~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~ 79 (128)
++||+++|+|++||++||++|||+|++|| ++|||++|+.+..++.+... ...++|+|+.+|+++|++.. ..+..
T Consensus 13 ~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~---~~~~~i~~~~ipdglp~~~~~~~~~~ 89 (454)
T 3hbf_A 13 LLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSN---EFLPNIKYYNVHDGLPKGYVSSGNPR 89 (454)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSS---CCCTTEEEEECCCCCCTTCCCCSCTT
T ss_pred CCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccc---cCCCCceEEecCCCCCCCccccCChH
Confidence 57999999999999999999999999999 99999999887766544321 01247999999999887632 22222
Q ss_pred HHHHHHHHHchHHHHHHHHHHhcCCCCCccEEEeCCCcccHHHHHHhcC
Q 040997 80 KLIENFLQVMPGKLEKLIEEINSREDEKIDCFIADGNMGWSLEVAKKMN 128 (128)
Q Consensus 80 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lg 128 (128)
..+..+.+.+...++++++++.++.+.+++|||+|++++|+.+||++||
T Consensus 90 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lg 138 (454)
T 3hbf_A 90 EPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMH 138 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhC
Confidence 2233333333444556665543221258999999999999999999997
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=99.92 E-value=9.8e-25 Score=164.19 Aligned_cols=128 Identities=30% Similarity=0.576 Sum_probs=93.4
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchhhhhhhhhccCCCC-CCCceEEecCCCCCCCC----CC
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYL-EEQIRLVSIPDGMEPWE----DR 75 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~----~~ 75 (128)
|+++||+++|+|++||++||++||++|++|||+|||++++.+...+.+........ .++++|+.+|++++... ..
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~ 85 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVS 85 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcc
Confidence 45679999999999999999999999999999999999998876654431000001 13799999998776521 12
Q ss_pred CCHHHHHHHHHHHchHHHHHHHHHHhcCC-CCCccEEEeCCCcccHHHHHHhcC
Q 040997 76 NDFGKLIENFLQVMPGKLEKLIEEINSRE-DEKIDCFIADGNMGWSLEVAKKMN 128 (128)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~-~~~~d~vI~D~~~~~~~~vA~~lg 128 (128)
.+...+++.+.+.+...++++++++..+. +.++||||+|.+++|+.++|+++|
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lg 139 (482)
T 2pq6_A 86 QDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFE 139 (482)
T ss_dssp CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTT
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcC
Confidence 34445555555678888999999986420 158999999999999999999986
No 3
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=99.87 E-value=1.7e-21 Score=146.10 Aligned_cols=118 Identities=19% Similarity=0.287 Sum_probs=86.2
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHC--CCeEEEEeCcchhh-----hhhhhhccCCCCCCCceEEecCCC-CCCCCC
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYYHK-----RVVESLQGKNYLEEQIRLVSIPDG-MEPWED 74 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~r--G~~Vt~~~t~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~ 74 (128)
++||+++|+|++||++||++||++|++| ||+|||++|+.+.. .+.. .. ....+++|+.+|++ ++....
T Consensus 9 ~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~-~~---~~~~~i~~~~lp~~~~~~~~~ 84 (463)
T 2acv_A 9 NSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKS-VL---ASQPQIQLIDLPEVEPPPQEL 84 (463)
T ss_dssp CEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHH-HH---CSCTTEEEEECCCCCCCCGGG
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhh-cc---cCCCCceEEECCCCCCCcccc
Confidence 5699999999999999999999999999 99999999997632 1211 11 11247999999975 332110
Q ss_pred CCCH-HHHHHHHHHHchHHHHHHHHHHhcCCCCCccEEEeCCCcccHHHHHHhcC
Q 040997 75 RNDF-GKLIENFLQVMPGKLEKLIEEINSREDEKIDCFIADGNMGWSLEVAKKMN 128 (128)
Q Consensus 75 ~~~~-~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lg 128 (128)
.... ..+... ...+...++++++++ + +.+|||||+|.+++|+.++|+++|
T Consensus 85 ~~~~~~~~~~~-~~~~~~~~~~ll~~~-~--~~~~d~vI~D~~~~~~~~vA~~lg 135 (463)
T 2acv_A 85 LKSPEFYILTF-LESLIPHVKATIKTI-L--SNKVVGLVLDFFCVSMIDVGNEFG 135 (463)
T ss_dssp GGSHHHHHHHH-HHHTHHHHHHHHHHH-C--CTTEEEEEEEGGGGGGHHHHHHTT
T ss_pred cCCccHHHHHH-HHhhhHHHHHHHHhc-c--CCCCeEEEECCcchhHHHHHHHcC
Confidence 1111 113333 345666788999887 2 158999999999999999999987
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=99.87 E-value=1.7e-21 Score=145.79 Aligned_cols=125 Identities=21% Similarity=0.295 Sum_probs=83.9
Q ss_pred CCCeEEEEcCCCcCChHHHHHHHHHHHHCC--CeEEEEeCcchhhhhhhhhccCCCCCCCceEEecCCCCCCCCC-CCCH
Q 040997 2 SSPHVLVMPGPAQGHVIPLLEFSQCLAKHG--FRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGMEPWED-RNDF 78 (128)
Q Consensus 2 ~~~hvl~~p~p~~GH~~P~l~la~~L~~rG--~~Vt~~~t~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~ 78 (128)
.++||+++|+|++||++||++||++|++|| +.|||++++.+..++.+.... ....+++|+.++++++++.. ....
T Consensus 6 ~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~--~~~~~i~~~~i~~glp~~~~~~~~~ 83 (456)
T 2c1x_A 6 TNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMH--TMQCNIKSYDISDGVPEGYVFAGRP 83 (456)
T ss_dssp -CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC---------CTTEEEEECCCCCCTTCCCCCCT
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccc--cCCCceEEEeCCCCCCCcccccCCh
Confidence 357999999999999999999999999986 567889998765554332110 01247999999988775421 1122
Q ss_pred HHHHHHHHHHchHHHHHHHHHHhcCCCCCccEEEeCCCcccHHHHHHhcC
Q 040997 79 GKLIENFLQVMPGKLEKLIEEINSREDEKIDCFIADGNMGWSLEVAKKMN 128 (128)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lg 128 (128)
...+..+.+.+...++++++++.++.+.+|||||+|.+++|+.++|+++|
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lg 133 (456)
T 2c1x_A 84 QEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMG 133 (456)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHT
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhC
Confidence 22233333333344555565543210158999999999999999999986
No 5
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=99.85 E-value=1.8e-20 Score=141.09 Aligned_cols=121 Identities=25% Similarity=0.349 Sum_probs=86.7
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHC-CCeEEEEeCcch--hhhhhhhhccCCCCCCCceEEecCCCC-CCCCCCCCH
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKH-GFRVTFVNTDYY--HKRVVESLQGKNYLEEQIRLVSIPDGM-EPWEDRNDF 78 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~r-G~~Vt~~~t~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~ 78 (128)
++||+++|+|++||++||++||++|++| ||+|||++++.+ .+.+..... ....+++|+.+|++. +......+.
T Consensus 6 ~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~---~~~~~i~~~~l~~~~~~~~~~~~~~ 82 (480)
T 2vch_A 6 TPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD---SLPSSISSVFLPPVDLTDLSSSTRI 82 (480)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC----CCTTEEEEECCCCCCTTSCTTCCH
T ss_pred CcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc---ccCCCceEEEcCCCCCCCCCCchhH
Confidence 3699999999999999999999999998 999999999874 333332110 002479999998643 211112233
Q ss_pred HHHHHHHHHHchHHHHHHHHHHhcCCCCCc-cEEEeCCCcccHHHHHHhcC
Q 040997 79 GKLIENFLQVMPGKLEKLIEEINSREDEKI-DCFIADGNMGWSLEVAKKMN 128 (128)
Q Consensus 79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~-d~vI~D~~~~~~~~vA~~lg 128 (128)
...+......+...++++++++... .++ ||||+|.+++|+.++|+++|
T Consensus 83 ~~~~~~~~~~~~~~l~~ll~~~~~~--~~~pd~vI~D~~~~~~~~vA~~lg 131 (480)
T 2vch_A 83 ESRISLTVTRSNPELRKVFDSFVEG--GRLPTALVVDLFGTDAFDVAVEFH 131 (480)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHHT--TCCCSEEEECTTCGGGHHHHHHTT
T ss_pred HHHHHHHHHhhhHHHHHHHHHhccC--CCCCeEEEECCcchhHHHHHHHcC
Confidence 3333233445666788888887421 477 99999999999999999987
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.83 E-value=1.3e-19 Score=133.56 Aligned_cols=116 Identities=21% Similarity=0.225 Sum_probs=85.0
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchhhhhhhhhccCCCCCCCceEEecCCCCCCCC-C----C
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGMEPWE-D----R 75 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~----~ 75 (128)
|..+||++++++++||++|++.||++|++|||+|||++++.+.+.+.+. +++|.+++++++.+. . .
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~ 80 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA---------GATPVVYDSILPKESNPEESWP 80 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCEEEECCCCSCCTTCTTCCCC
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEecCccccccccchhhcc
Confidence 5567999999999999999999999999999999999999887665543 678888886554321 1 1
Q ss_pred CCHHHHHHHHHHHchHHHHHHHHHHhcCCCCCccEEEeCCCcccHHHHHHhcC
Q 040997 76 NDFGKLIENFLQVMPGKLEKLIEEINSREDEKIDCFIADGNMGWSLEVAKKMN 128 (128)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lg 128 (128)
.+....+..+.+.....++++.+.+.+ .+|||||+|.+++|+..+|+++|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~VI~d~~~~~~~~~A~~lg 130 (424)
T 2iya_A 81 EDQESAMGLFLDEAVRVLPQLEDAYAD---DRPDLIVYDIASWPAPVLGRKWD 130 (424)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHTTT---SCCSEEEEETTCTHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEEcCcccHHHHHHHhcC
Confidence 233333333333333334555555543 58999999999999999999876
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.76 E-value=6.1e-18 Score=123.27 Aligned_cols=114 Identities=17% Similarity=0.201 Sum_probs=75.4
Q ss_pred CCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchhhhhhhhhccCCCCCCCceEEecCCCCCC-------CC-
Q 040997 2 SSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGMEP-------WE- 73 (128)
Q Consensus 2 ~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-------~~- 73 (128)
+.+||||+|+|++||++|++.||++|++|||+|||++++.+..... .++.+..+.++... ..
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~~~~~ 90 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE----------AGLCAVDVSPGVNYAKLFVPDDTD 90 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT----------TTCEEEESSTTCCSHHHHSCCC--
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh----------cCCeeEecCCchhHhhhccccccc
Confidence 3579999999999999999999999999999999999987764322 24555555322111 00
Q ss_pred ---C----CCCHHHHHHHHHHHchHHHHHHHHHHhcCCCCCccEEEeCCCcccHHHHHHhcC
Q 040997 74 ---D----RNDFGKLIENFLQVMPGKLEKLIEEINSREDEKIDCFIADGNMGWSLEVAKKMN 128 (128)
Q Consensus 74 ---~----~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lg 128 (128)
. ......+...+.......+.++++.+.+ .+||+||+|.+.+|+..+|+++|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pD~Vv~d~~~~~~~~~A~~~g 149 (400)
T 4amg_A 91 VTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARS---WRPDLVVHTPTQGAGPLTAAALQ 149 (400)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEECTTCTHHHHHHHHTT
T ss_pred cccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCEEEECcchHHHHHHHHHcC
Confidence 0 0011111222222222334444544443 58999999999999999999876
No 8
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.70 E-value=2.1e-16 Score=114.97 Aligned_cols=116 Identities=20% Similarity=0.279 Sum_probs=83.5
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchhhhhhhhhccCCCCCCCceEEecCCCCCCCC-----CC
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGMEPWE-----DR 75 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-----~~ 75 (128)
|..+||+++++++.||++|++.|+++|.++||+|+|++++.+.+.+.. .++++..++...+... ..
T Consensus 2 m~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~---------~G~~~~~~~~~~~~~~~~~~~~~ 72 (402)
T 3ia7_A 2 MRQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKA---------AGAEVVLYKSEFDTFHVPEVVKQ 72 (402)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH---------TTCEEEECCCGGGTSSSSSSSCC
T ss_pred CCCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHH---------cCCEEEecccccccccccccccc
Confidence 555699999999999999999999999999999999999877766654 3688888874332211 11
Q ss_pred CCHHHHHHH-HHHHchHHHHHHHHHHhcCCCCCccEEEeC-CCcccHHHHHHhcC
Q 040997 76 NDFGKLIEN-FLQVMPGKLEKLIEEINSREDEKIDCFIAD-GNMGWSLEVAKKMN 128 (128)
Q Consensus 76 ~~~~~~~~~-~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D-~~~~~~~~vA~~lg 128 (128)
.+....+.. +.......+.++.+.+.+ .+||+||+| .+..|+..+|+++|
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~d~~~~~~~~~aA~~~g 124 (402)
T 3ia7_A 73 EDAETQLHLVYVRENVAILRAAEEALGD---NPPDLVVYDVFPFIAGRLLAARWD 124 (402)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHTT---CCCSEEEEESTTHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEECchHHHHHHHHHHhhC
Confidence 223333333 333333345566666654 689999999 88889999988765
No 9
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.66 E-value=1.4e-15 Score=112.00 Aligned_cols=116 Identities=22% Similarity=0.244 Sum_probs=80.7
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchhhhhhhhhccCCCCCCCceEEecCCCCCCCC-C----C
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGMEPWE-D----R 75 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~----~ 75 (128)
|..+||++++.++.||++|++.|+++|+++||+||+++++...+.+.. .++++..++...+.+. . .
T Consensus 5 m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~ 75 (430)
T 2iyf_A 5 TTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAA---------TGPRPVLYHSTLPGPDADPEAWG 75 (430)
T ss_dssp ---CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHT---------TSCEEEECCCCSCCTTSCGGGGC
T ss_pred cccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHh---------CCCEEEEcCCcCccccccccccc
Confidence 334699999999999999999999999999999999999887554433 3678888876443221 0 1
Q ss_pred CCHHHHHHHHHHHchHHHHHHHHHHhcCCCCCccEEEeCCCcccHHHHHHhcC
Q 040997 76 NDFGKLIENFLQVMPGKLEKLIEEINSREDEKIDCFIADGNMGWSLEVAKKMN 128 (128)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lg 128 (128)
.+....+..+...+...+.++.+.+.+ .+||+||+|.+.+|+..+|+++|
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~d~~~~~~~~~A~~~g 125 (430)
T 2iyf_A 76 STLLDNVEPFLNDAIQALPQLADAYAD---DIPDLVLHDITSYPARVLARRWG 125 (430)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHTT---SCCSEEEEETTCHHHHHHHHHHT
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEECCccHHHHHHHHHcC
Confidence 232333333323233334555555543 58999999998889999998875
No 10
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.65 E-value=1.2e-15 Score=112.24 Aligned_cols=112 Identities=16% Similarity=0.201 Sum_probs=74.8
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchhhhhhhhhccCCCCCCCceEEecCCCCCCC-CC-CCCHHHH
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGMEPW-ED-RNDFGKL 81 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~-~~~~~~~ 81 (128)
+||++++++++||++|++.||++|++|||+|||++++...+.+.+ .+++|..++...... .. .......
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~---------~g~~~~~i~~~~~~~~~~~~~~~~~~ 71 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAE---------VGVPHVPVGPSARAPIQRAKPLTAED 71 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH---------TTCCEEECCC-------CCSCCCHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHH---------cCCeeeeCCCCHHHHhhcccccchHH
Confidence 489999999999999999999999999999999999987655443 368888887543211 00 1111111
Q ss_pred HHHHHHHchHHHHHHHHHHhcCCCCCccEEEeCC-Cccc--HHHHHHhcC
Q 040997 82 IENFLQVMPGKLEKLIEEINSREDEKIDCFIADG-NMGW--SLEVAKKMN 128 (128)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~-~~~~--~~~vA~~lg 128 (128)
+..+ +....++.++++.+.. .+|||||+|. +.+| +..+|+++|
T Consensus 72 ~~~~---~~~~~~~~~~~l~~~~-~~pD~vi~d~~~~~~~~~~~~A~~lg 117 (415)
T 1iir_A 72 VRRF---TTEAIATQFDEIPAAA-EGCAAVVTTGLLAAAIGVRSVAEKLG 117 (415)
T ss_dssp HHHH---HHHHHHHHHHHHHHHT-TTCSEEEEESCHHHHHHHHHHHHHHT
T ss_pred HHHH---HHHHHHHHHHHHHHHh-cCCCEEEECChhHhHhhHHHHHHHhC
Confidence 1111 1122334444443211 5899999998 6788 899999876
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.63 E-value=1.9e-15 Score=110.72 Aligned_cols=113 Identities=18% Similarity=0.250 Sum_probs=80.4
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchhhhhhhhhccCCCCCCCceEEecCCCCCCCCC-----CCCH
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGMEPWED-----RNDF 78 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----~~~~ 78 (128)
+||+++++++.||++|++.|+++|.++||+|+|++++.+.+.+.. .++++..++...+.... ....
T Consensus 21 ~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~---------~G~~~~~~~~~~~~~~~~~~~~~~~~ 91 (415)
T 3rsc_A 21 AHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRA---------AGATVVPYQSEIIDADAAEVFGSDDL 91 (415)
T ss_dssp CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH---------TTCEEEECCCSTTTCCHHHHHHSSSS
T ss_pred CEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHh---------cCCEEEeccccccccccchhhccccH
Confidence 599999999999999999999999999999999999887776654 36888888754432210 0011
Q ss_pred HHHHHH-HHHHchHHHHHHHHHHhcCCCCCccEEEeC-CCcccHHHHHHhcC
Q 040997 79 GKLIEN-FLQVMPGKLEKLIEEINSREDEKIDCFIAD-GNMGWSLEVAKKMN 128 (128)
Q Consensus 79 ~~~~~~-~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D-~~~~~~~~vA~~lg 128 (128)
...+.. +.......++++.+.+.+ .+||+||+| .+.+|+..+|+++|
T Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~l~~---~~PDlVi~d~~~~~~~~~aA~~~g 140 (415)
T 3rsc_A 92 GVRPHLMYLRENVSVLRATAEALDG---DVPDLVLYDDFPFIAGQLLAARWR 140 (415)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSS---SCCSEEEEESTTHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEECchhhhHHHHHHHHhC
Confidence 111111 222222334555555544 689999999 88889999888875
No 12
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.57 E-value=1.5e-14 Score=106.46 Aligned_cols=112 Identities=14% Similarity=0.070 Sum_probs=74.0
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchhhhhhhhhccCCCCCCCceEEecCCCCCCCC---CCCCHHH
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGMEPWE---DRNDFGK 80 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~ 80 (128)
+||++++.++.||++|++.||++|+++||+|||++++.+.+.+... +++|..++....... .......
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV---------GVPHVPVGLPQHMMLQEGMPPPPPE 71 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCCEEECSCCGGGCCCTTSCCCCHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCeeeecCCCHHHHHhhccccchhH
Confidence 4899999999999999999999999999999999998866555442 678888875421110 0111111
Q ss_pred HHHHHHHHchHHHHHHHHHHhcCCCCCccEEEeCC-Cccc--HHHHHHhcC
Q 040997 81 LIENFLQVMPGKLEKLIEEINSREDEKIDCFIADG-NMGW--SLEVAKKMN 128 (128)
Q Consensus 81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~-~~~~--~~~vA~~lg 128 (128)
.+..+. .....++++.+.+.. .+|||||+|. +.+| +..+|+++|
T Consensus 72 ~~~~~~---~~~~~~~~~~l~~~~-~~pD~vi~d~~~~~~~~~~~~A~~~g 118 (416)
T 1rrv_A 72 EEQRLA---AMTVEMQFDAVPGAA-EGCAAVVAVGDLAAATGVRSVAEKLG 118 (416)
T ss_dssp HHHHHH---HHHHHHHHHHHHHHT-TTCSEEEEEECHHHHHHHHHHHHHHT
T ss_pred HHHHHH---HHHHHHHHHHHHHHh-cCCCEEEEcCchHHHHHHHHHHHHcC
Confidence 111111 112234444443111 5899999997 4566 888998875
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.52 E-value=4e-14 Score=104.90 Aligned_cols=114 Identities=12% Similarity=0.109 Sum_probs=78.1
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchhhhhhhhhccCCCCCCCceEEecCCCCCC-C---------
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGMEP-W--------- 72 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~--------- 72 (128)
.+||++++.++.||++|++.|+++|.++||+|+|++++...+.+.. .+++|..++..... +
T Consensus 20 ~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~---------~G~~~~~i~~~~~~~~~~~~~~~~~ 90 (441)
T 2yjn_A 20 HMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITA---------AGLTAVPVGTDVDLVDFMTHAGHDI 90 (441)
T ss_dssp CCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHT---------TTCCEEECSCCCCHHHHHHHTTHHH
T ss_pred ccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHh---------CCCceeecCCccchHHHhhhhhccc
Confidence 4689999999999999999999999999999999999887654433 36888888754210 0
Q ss_pred ------CC-----CC--CHH---HHHHHHHHH----c-hH-HHHHHHHHHhcCCCCCccEEEeCCCcccHHHHHHhcC
Q 040997 73 ------ED-----RN--DFG---KLIENFLQV----M-PG-KLEKLIEEINSREDEKIDCFIADGNMGWSLEVAKKMN 128 (128)
Q Consensus 73 ------~~-----~~--~~~---~~~~~~~~~----~-~~-~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lg 128 (128)
.+ .. ... ..+..+.+. + .. .+.++++.+.+ .+||+||+|.+..|+..+|+++|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pDlVv~d~~~~~~~~aA~~lg 165 (441)
T 2yjn_A 91 IDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK---WRPDLVIWEPLTFAAPIAAAVTG 165 (441)
T ss_dssp HHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH---HCCSEEEECTTCTHHHHHHHHHT
T ss_pred ccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh---cCCCEEEecCcchhHHHHHHHcC
Confidence 00 10 111 111112111 1 12 45666665543 58999999998888999998875
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.51 E-value=2.8e-13 Score=98.37 Aligned_cols=113 Identities=11% Similarity=0.075 Sum_probs=75.2
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchhhhhhhhhccCCCCCCCceEEecCCCC------------CC
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGM------------EP 71 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------------~~ 71 (128)
+||++++.++.||++|++.|+++|+++||+|++++++...+.+.. .++++..++... +.
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTG---------VGLPAVATTDLPIRHFITTDREGRPE 71 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH---------TTCCEEESCSSCHHHHHHBCTTSCBC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHh---------CCCEEEEeCCcchHHHHhhhcccCcc
Confidence 489999999999999999999999999999999999876544433 357777776432 00
Q ss_pred CCCCC-CHHHHH-HH-HHHHchHHHHHHHHHHhcCCCCCccEEEeCCCcccHHHHHHhcC
Q 040997 72 WEDRN-DFGKLI-EN-FLQVMPGKLEKLIEEINSREDEKIDCFIADGNMGWSLEVAKKMN 128 (128)
Q Consensus 72 ~~~~~-~~~~~~-~~-~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lg 128 (128)
..... .....+ .. +...+...+.++.+.+.+ .+||+||+|.+..|+..+|+++|
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~~~~~~~~~~~a~~~g 128 (384)
T 2p6p_A 72 AIPSDPVAQARFTGRWFARMAASSLPRMLDFSRA---WRPDLIVGGTMSYVAPLLALHLG 128 (384)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCTHHHHHHHHHT
T ss_pred ccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhc---cCCcEEEECcchhhHHHHHHhcC
Confidence 00011 111111 21 111222234555555543 48999999998888888888775
No 15
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.43 E-value=1.6e-12 Score=94.94 Aligned_cols=110 Identities=16% Similarity=0.273 Sum_probs=73.6
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchhhhhhhhhccCCCCCCCceEEecCCCCC------------
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGME------------ 70 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------------ 70 (128)
.++|+++..++.||++|++.|+++|.++||+|+++++ ...+.+.. .++.+..++....
T Consensus 20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~---------~G~~~~~~~~~~~~~~~~~~~~~~~ 89 (398)
T 3oti_A 20 HMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAA---------AGLEVVDVAPDYSAVKVFEQVAKDN 89 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHT---------TTCEEEESSTTCCHHHHHHHHHHHC
T ss_pred cCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHh---------CCCeeEecCCccCHHHHhhhcccCC
Confidence 3699999999999999999999999999999999998 55555433 3688888864311
Q ss_pred ----------CCCCCCCHHHHHHHHHHHchHHHHHHHHHHhcCCCCCccEEEeCCCcccHHHHHHhcC
Q 040997 71 ----------PWEDRNDFGKLIENFLQVMPGKLEKLIEEINSREDEKIDCFIADGNMGWSLEVAKKMN 128 (128)
Q Consensus 71 ----------~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lg 128 (128)
...........+...... .+.++.+.+.+ .+||+||+|....++..+|+++|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~l~~---~~pDlVv~d~~~~~~~~aA~~~g 151 (398)
T 3oti_A 90 PRFAETVATRPAIDLEEWGVQIAAVNRP---LVDGTMALVDD---YRPDLVVYEQGATVGLLAADRAG 151 (398)
T ss_dssp HHHHHTGGGSCCCSGGGGHHHHHHHHGG---GHHHHHHHHHH---HCCSEEEEETTCHHHHHHHHHHT
T ss_pred ccccccccCChhhhHHHHHHHHHHHHHH---HHHHHHHHHHH---cCCCEEEECchhhHHHHHHHHcC
Confidence 000111112222222222 23334444433 48999999988888888887764
No 16
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.38 E-value=6.5e-13 Score=97.59 Aligned_cols=111 Identities=19% Similarity=0.224 Sum_probs=71.7
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchhhhhhhhhccCCCCCCCceEEecCCCCCC--CCCCCCHHHH
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGMEP--WEDRNDFGKL 81 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~ 81 (128)
+||++++.+..||++|++.|+++|.+|||+|+|++++...+.+.+ .++.|..++..... +........+
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~---------~g~~~~~l~~~~~~~~~~~~~~~~~~ 71 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAE---------VGVPMVPVGRAVRAGAREPGELPPGA 71 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHH---------TTCCEEECSSCSSGGGSCTTCCCTTC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH---------cCCceeecCCCHHHHhccccCCHHHH
Confidence 479999999999999999999999999999999999887766654 36788887643211 0000000001
Q ss_pred HHHHHHHchHHHHHHHHHHhcCCCCCccEEEeCCCcccH---HHHHHhcC
Q 040997 82 IENFLQVMPGKLEKLIEEINSREDEKIDCFIADGNMGWS---LEVAKKMN 128 (128)
Q Consensus 82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~---~~vA~~lg 128 (128)
...+.......++++.+.+ .+||+||+|..++++ ..+|+++|
T Consensus 72 ~~~~~~~~~~~~~~l~~~~-----~~pD~Vi~~~~~~~~~~a~~~A~~lg 116 (404)
T 3h4t_A 72 AEVVTEVVAEWFDKVPAAI-----EGCDAVVTTGLLPAAVAVRSMAEKLG 116 (404)
T ss_dssp GGGHHHHHHHHHHHHHHHH-----TTCSEEEEEECHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHh-----cCCCEEEECCchhhhhhhhhHHhhcC
Confidence 1111222223344444333 369999999766555 67887765
No 17
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.37 E-value=1.2e-12 Score=95.49 Aligned_cols=114 Identities=14% Similarity=0.154 Sum_probs=74.5
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchhhhhhhhhccCCCCCCCceEEecCCCCC---------CCC
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDGME---------PWE 73 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---------~~~ 73 (128)
.++|++++.++.||++|++.|+++|.++||+|++++++...+.+.. .++.+..++.... .+.
T Consensus 15 ~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~---------~G~~~~~~~~~~~~~~~~~~~~~~~ 85 (398)
T 4fzr_A 15 HMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTG---------AGLPFAPTCPSLDMPEVLSWDREGN 85 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHH---------TTCCEEEEESSCCHHHHHSBCTTSC
T ss_pred ceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHh---------CCCeeEecCCccchHhhhhhhccCc
Confidence 4699999999999999999999999999999999998776665544 2566766652110 000
Q ss_pred ---CCCCHHH----HHHHHHHHchHHHHHHHHHHhcCCCCCccEEEeCCCcccHHHHHHhcC
Q 040997 74 ---DRNDFGK----LIENFLQVMPGKLEKLIEEINSREDEKIDCFIADGNMGWSLEVAKKMN 128 (128)
Q Consensus 74 ---~~~~~~~----~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lg 128 (128)
....... ....+.......+.++.+.+.+ .+||+||+|....++..+|+.+|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pDlVv~d~~~~~~~~~a~~~g 144 (398)
T 4fzr_A 86 RTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER---WKPDLVLTETYSLTGPLVAATLG 144 (398)
T ss_dssp BCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCTHHHHHHHHHT
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh---CCCCEEEECccccHHHHHHHhhC
Confidence 0111111 1111222222233444444443 58999999987788888887764
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.36 E-value=4.6e-12 Score=92.04 Aligned_cols=114 Identities=13% Similarity=0.114 Sum_probs=71.2
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchhhhhhhhhccCCCCCCCceEEec-CCCC----------CC
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSI-PDGM----------EP 71 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~----------~~ 71 (128)
+++|+++..++.||++|++.|+++|.++||+|++++++...+.+... ++++..+ +... +.
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~ 71 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGA---------GLTTAGIRGNDRTGDTGGTTQLRF 71 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHB---------TCEEEEC--------------CCS
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhC---------CCceeeecCCccchhhhhhhcccc
Confidence 36899999999999999999999999999999999987766555442 5666666 3211 00
Q ss_pred CCC----CC--CHHHHHHHHHHH----chHHHHHHHHHHhcCCCCCccEEEeCCCcccHHHHHHhcC
Q 040997 72 WED----RN--DFGKLIENFLQV----MPGKLEKLIEEINSREDEKIDCFIADGNMGWSLEVAKKMN 128 (128)
Q Consensus 72 ~~~----~~--~~~~~~~~~~~~----~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lg 128 (128)
... .. .....+...... +...+.++.+.+.+ .+||+||+|.+..++..+|+++|
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~PD~Vv~~~~~~~~~~aa~~~g 135 (391)
T 3tsa_A 72 PNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA---WRPSVLLVDVCALIGRVLGGLLD 135 (391)
T ss_dssp CCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCHHHHHHHHHTT
T ss_pred cccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh---cCCCEEEeCcchhHHHHHHHHhC
Confidence 000 00 011111111111 11114444444443 58999999987777777777664
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.21 E-value=3.8e-11 Score=87.58 Aligned_cols=112 Identities=16% Similarity=0.086 Sum_probs=71.2
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchhhhhhhhhccCCCCCCCceEEecCCC--------------
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPDG-------------- 68 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------------- 68 (128)
+++|+++..++.||++|++.|+++|.++||+|++++++.....+.. .++++..++..
T Consensus 20 ~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~~~ 90 (412)
T 3otg_A 20 HMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRK---------LGFEPVATGMPVFDGFLAALRIRFD 90 (412)
T ss_dssp SCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH---------TTCEEEECCCCHHHHHHHHHHHHHS
T ss_pred eeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHh---------cCCceeecCcccccchhhhhhhhhc
Confidence 4699999999999999999999999999999999999865444333 36788877631
Q ss_pred ---CCCCC---CCCCHHHHHHHHHHHchHHHHHHHHHHhcCCCCCccEEEeCCCcccHHHHHHhcC
Q 040997 69 ---MEPWE---DRNDFGKLIENFLQVMPGKLEKLIEEINSREDEKIDCFIADGNMGWSLEVAKKMN 128 (128)
Q Consensus 69 ---~~~~~---~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lg 128 (128)
.+... ........+.... ....+.++.+.+.+ .+||+||+|....++..+|+++|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~l~~---~~pDvVv~~~~~~~~~~aa~~~g 151 (412)
T 3otg_A 91 TDSPEGLTPEQLSELPQIVFGRVI--PQRVFDELQPVIER---LRPDLVVQEISNYGAGLAALKAG 151 (412)
T ss_dssp CSCCTTCCHHHHTTSHHHHHHTHH--HHHHHHHHHHHHHH---HCCSEEEEETTCHHHHHHHHHHT
T ss_pred ccCCccCChhHhhHHHHHHHhccc--hHHHHHHHHHHHHh---cCCCEEEECchhhHHHHHHHHcC
Confidence 00000 0011111111110 11122333444433 48999999987777777777654
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=98.97 E-value=5.8e-09 Score=75.78 Aligned_cols=98 Identities=21% Similarity=0.308 Sum_probs=56.5
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchh-hhhhhhhccCCCCCCCceEEecCC-CCCCCCC---C
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYH-KRVVESLQGKNYLEEQIRLVSIPD-GMEPWED---R 75 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~-~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~---~ 75 (128)
|++ +|++......||++|.+.||++|.+|||+|+|++++... ..+... .++.+..++. +++.... .
T Consensus 1 M~~-~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~--------~g~~~~~i~~~~~~~~~~~~~~ 71 (365)
T 3s2u_A 1 MKG-NVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPK--------AGLPLHLIQVSGLRGKGLKSLV 71 (365)
T ss_dssp --C-EEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGG--------GTCCEEECC-------------
T ss_pred CCC-cEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhh--------cCCcEEEEECCCcCCCCHHHHH
Confidence 444 788877544599999999999999999999999987542 222221 3677777763 3322111 1
Q ss_pred CCHHHHHHHHHHHchHHHHHHHHHHhcCCCCCccEEEeCCCcc
Q 040997 76 NDFGKLIENFLQVMPGKLEKLIEEINSREDEKIDCFIADGNMG 118 (128)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~ 118 (128)
.....++..+ . ...+++++ .+||+||+|....
T Consensus 72 ~~~~~~~~~~----~-~~~~~l~~------~~PDvVi~~g~~~ 103 (365)
T 3s2u_A 72 KAPLELLKSL----F-QALRVIRQ------LRPVCVLGLGGYV 103 (365)
T ss_dssp -CHHHHHHHH----H-HHHHHHHH------HCCSEEEECSSST
T ss_pred HHHHHHHHHH----H-HHHHHHHh------cCCCEEEEcCCcc
Confidence 1122222211 1 13344444 4899999996543
No 21
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=98.28 E-value=1e-05 Score=57.69 Aligned_cols=39 Identities=31% Similarity=0.555 Sum_probs=35.1
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcch
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYY 42 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~ 42 (128)
++|+++.....||..+++.|++.|.++||+|++++....
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~ 45 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADR 45 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTS
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCc
Confidence 699999866669999999999999999999999988653
No 22
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=95.52 E-value=0.021 Score=40.12 Aligned_cols=41 Identities=17% Similarity=0.148 Sum_probs=32.8
Q ss_pred CCCCeEEEEcCC----------------CcCChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 1 MSSPHVLVMPGP----------------AQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 1 m~~~hvl~~p~p----------------~~GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
|+.++|+++... ..|.-.-...|++.|.++||+|++++...
T Consensus 1 M~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~ 57 (342)
T 2iuy_A 1 MRPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPG 57 (342)
T ss_dssp --CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTT
T ss_pred CCccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCC
Confidence 778899998854 24677788999999999999999998764
No 23
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=95.24 E-value=0.14 Score=36.28 Aligned_cols=60 Identities=13% Similarity=0.098 Sum_probs=39.8
Q ss_pred CCCCeEEEEcC--C--CcCChHHHHHHHHHHHHCCCeEEEEeCcchhhhhhhhhccCCCCCCCceEEecCC
Q 040997 1 MSSPHVLVMPG--P--AQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPD 67 (128)
Q Consensus 1 m~~~hvl~~p~--p--~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 67 (128)
|++++|+++.. + ..|.-.-+..|++.| +||+|++++............ ...++.+..++.
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 65 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYD-----KTLDYEVIRWPR 65 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHH-----TTCSSEEEEESS
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhc-----cccceEEEEccc
Confidence 45679999873 3 358888999999999 799999998876543211110 013567777654
No 24
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=94.75 E-value=0.067 Score=38.55 Aligned_cols=42 Identities=10% Similarity=0.078 Sum_probs=34.1
Q ss_pred CCCCeEEEEcCC--CcCChHHHHHHHHHHHHCCCeEEEEeCcch
Q 040997 1 MSSPHVLVMPGP--AQGHVIPLLEFSQCLAKHGFRVTFVNTDYY 42 (128)
Q Consensus 1 m~~~hvl~~p~p--~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~ 42 (128)
|++++|+++... ..|+-.-+..|++.|.++||+|++++....
T Consensus 38 ~~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~ 81 (416)
T 2x6q_A 38 LKGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEGP 81 (416)
T ss_dssp TTTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred hhccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEccCC
Confidence 567789887643 348889999999999999999999877543
No 25
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=94.71 E-value=0.053 Score=39.26 Aligned_cols=40 Identities=23% Similarity=0.279 Sum_probs=32.3
Q ss_pred CCeEEEEcC---C--------CcCChHHHHHHHHHHHHCCCeEEEEeCcch
Q 040997 3 SPHVLVMPG---P--------AQGHVIPLLEFSQCLAKHGFRVTFVNTDYY 42 (128)
Q Consensus 3 ~~hvl~~p~---p--------~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~ 42 (128)
.++|+++.. | ..|+-..+..|++.|.++||+|++++....
T Consensus 20 mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~ 70 (438)
T 3c48_A 20 HMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATR 70 (438)
T ss_dssp CCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCC
T ss_pred hheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCC
Confidence 458999984 2 258889999999999999999999987643
No 26
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=94.64 E-value=0.066 Score=38.48 Aligned_cols=40 Identities=25% Similarity=0.276 Sum_probs=31.2
Q ss_pred CCCeEEEEcC---C--CcCChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 2 SSPHVLVMPG---P--AQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 2 ~~~hvl~~p~---p--~~GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
++++|+++.. | ..|--.=+..|++.|+++||+|+++++..
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~ 45 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSH 45 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECT
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 3678999872 2 23555668999999999999999999653
No 27
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=94.33 E-value=0.13 Score=31.93 Aligned_cols=45 Identities=11% Similarity=0.110 Sum_probs=38.7
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchhhh
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKR 45 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~ 45 (128)
|++++|++.+.++-+|-.-..-++..|..+|++|.++-.....+.
T Consensus 1 ~~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~ 45 (137)
T 1ccw_A 1 MEKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQEL 45 (137)
T ss_dssp CCCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHH
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHH
Confidence 788899999999999999999999999999999998766544433
No 28
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=93.91 E-value=0.074 Score=39.41 Aligned_cols=38 Identities=24% Similarity=0.320 Sum_probs=31.6
Q ss_pred CeEEEEcC---C------------CcCChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 4 PHVLVMPG---P------------AQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 4 ~hvl~~p~---p------------~~GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
++|+++.. | ..|.-.-+..|++.|+++||+|++++...
T Consensus 8 MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~ 60 (499)
T 2r60_A 8 KHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRI 60 (499)
T ss_dssp CEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred ceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCC
Confidence 68999974 2 24777889999999999999999998754
No 29
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=92.87 E-value=0.13 Score=36.19 Aligned_cols=37 Identities=16% Similarity=0.199 Sum_probs=30.0
Q ss_pred eEEEEc---CCCcCChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 5 HVLVMP---GPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 5 hvl~~p---~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
+|+++. .|..|.-.-+..|++.|+++||+|++++...
T Consensus 2 kIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~ 41 (374)
T 2iw1_A 2 IVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSW 41 (374)
T ss_dssp CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEE
T ss_pred eEEEEEeecCCCcchhhHHHHHHHHHHhCCCeEEEEecCC
Confidence 577664 2445778889999999999999999998763
No 30
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=92.48 E-value=0.11 Score=38.16 Aligned_cols=39 Identities=13% Similarity=0.221 Sum_probs=29.1
Q ss_pred CCeEEEEcCCCc-----CChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 3 SPHVLVMPGPAQ-----GHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 3 ~~hvl~~p~p~~-----GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
+++|+++..... |=.+-+.+|+++|+++||+|++++...
T Consensus 46 ~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 46 GKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp SCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 457877763221 323568999999999999999999863
No 31
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=90.77 E-value=0.45 Score=33.79 Aligned_cols=41 Identities=15% Similarity=0.192 Sum_probs=32.0
Q ss_pred CCeEEEEcC---CC-cCChHHHHHHHHHHHHCCCeEEEEeCcchh
Q 040997 3 SPHVLVMPG---PA-QGHVIPLLEFSQCLAKHGFRVTFVNTDYYH 43 (128)
Q Consensus 3 ~~hvl~~p~---p~-~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~ 43 (128)
.++|+++.. +. .|.-.-+..|++.|.++||+|++++.....
T Consensus 20 ~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~ 64 (406)
T 2gek_A 20 HMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPH 64 (406)
T ss_dssp -CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTT
T ss_pred cceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCcc
Confidence 357888872 22 466688999999999999999999887553
No 32
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=90.72 E-value=0.25 Score=30.81 Aligned_cols=35 Identities=17% Similarity=0.196 Sum_probs=28.8
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
|.+.||+++- .|.+- ..+++.|..+|++|+++...
T Consensus 1 ~~~~~vlI~G---~G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 1 HRKDHFIVCG---HSILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCCSCEEEEC---CSHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCCcEEEEC---CCHHH--HHHHHHHHHCCCCEEEEECC
Confidence 7888999884 36555 68899999999999999874
No 33
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=89.43 E-value=0.93 Score=29.93 Aligned_cols=46 Identities=20% Similarity=0.125 Sum_probs=38.9
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchhhhhhh
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVE 48 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~~~ 48 (128)
+.+|++.+.++-.|-....-++..|..+|++|.++-.....+.+..
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~ 133 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVE 133 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHH
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH
Confidence 4589999999999999999999999999999999877655554433
No 34
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=89.30 E-value=0.59 Score=33.24 Aligned_cols=38 Identities=18% Similarity=0.295 Sum_probs=29.7
Q ss_pred CeEEEEcCCCc-CChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 4 PHVLVMPGPAQ-GHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 4 ~hvl~~p~p~~-GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
+.+....+|.. |.-.-+..|++.|+++||+|++++...
T Consensus 16 ~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~ 54 (394)
T 2jjm_A 16 LKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGL 54 (394)
T ss_dssp CEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 35666667764 677888999999999999999998854
No 35
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=89.19 E-value=0.5 Score=34.66 Aligned_cols=38 Identities=24% Similarity=0.335 Sum_probs=28.7
Q ss_pred CeEEEEcC---C---CcCChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 4 PHVLVMPG---P---AQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 4 ~hvl~~p~---p---~~GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
++|+++.. | ..|=-.=+..|++.|+++||+|++++...
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGY 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 36787763 2 23445677899999999999999998754
No 36
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=88.86 E-value=1.2 Score=30.58 Aligned_cols=44 Identities=18% Similarity=0.137 Sum_probs=37.4
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchhhhh
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRV 46 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~ 46 (128)
+++|++.+.++-+|-....-++..|..+|++|.++-.......+
T Consensus 123 ~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l 166 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEEV 166 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHHH
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 46899999999999999999999999999999998665444433
No 37
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=88.78 E-value=0.61 Score=34.19 Aligned_cols=38 Identities=13% Similarity=0.162 Sum_probs=28.2
Q ss_pred CeEEEEcC---C---CcCChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 4 PHVLVMPG---P---AQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 4 ~hvl~~p~---p---~~GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
++|+++.. | ..|=-.=+..|++.|+++||+|++++...
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAF 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCc
Confidence 36777763 2 12334567899999999999999998754
No 38
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=87.97 E-value=1.6 Score=29.24 Aligned_cols=45 Identities=16% Similarity=0.184 Sum_probs=35.9
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchhhhhhh
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVE 48 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~~~ 48 (128)
+.+|++.-..+.|-+. ..+|.++|.++|++|.++.|+.-.+.+..
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~~ 48 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMAT 48 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHHH
Confidence 4577777767777776 89999999999999999999877655433
No 39
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=87.34 E-value=0.79 Score=28.93 Aligned_cols=37 Identities=14% Similarity=0.273 Sum_probs=28.5
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchh
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYH 43 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~ 43 (128)
.+++++. .|.| +.|++.+++.|.++|.+|+++ ...+.
T Consensus 24 ~~~llIa-GG~G-ItPl~sm~~~l~~~~~~v~l~-g~r~~ 60 (158)
T 3lrx_A 24 GKILAIG-AYTG-IVEVYPIAKAWQEIGNDVTTL-HVTFE 60 (158)
T ss_dssp SEEEEEE-ETTH-HHHHHHHHHHHHHHTCEEEEE-EECBG
T ss_pred CeEEEEE-ccCc-HHHHHHHHHHHHhcCCcEEEE-EeCCH
Confidence 3566665 4555 899999999999989999999 65443
No 40
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=86.95 E-value=1.2 Score=28.40 Aligned_cols=43 Identities=21% Similarity=0.215 Sum_probs=36.3
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchhhh
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKR 45 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~ 45 (128)
+++|++.+.++-+|-.-..-++..|...|++|.++-.....+.
T Consensus 18 ~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~ 60 (161)
T 2yxb_A 18 RYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQ 60 (161)
T ss_dssp SCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHH
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHH
Confidence 5689999989999999999999999999999999865544333
No 41
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=86.47 E-value=0.92 Score=31.64 Aligned_cols=26 Identities=19% Similarity=0.224 Sum_probs=22.3
Q ss_pred CCcCChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 12 PAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 12 p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
=|.||+.=++.||++|. +|+|++...
T Consensus 13 IG~GHvmRcl~LA~~l~----~v~F~~~~~ 38 (282)
T 3hbm_A 13 IGFGHIKRDLVLAKQYS----DVSFACLPL 38 (282)
T ss_dssp TBSHHHHHHHHHHTTCS----SEEEEECCC
T ss_pred ccccHHHHHHHHHHHHH----hCEEEEecC
Confidence 35699999999999998 899988654
No 42
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=85.83 E-value=2.1 Score=28.59 Aligned_cols=46 Identities=20% Similarity=0.251 Sum_probs=38.8
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchhhhhhh
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVE 48 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~~~ 48 (128)
+.+|++.+.++-.|-....-++..|..+|++|.++-.......+..
T Consensus 92 ~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~ 137 (215)
T 3ezx_A 92 AGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVE 137 (215)
T ss_dssp CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHH
T ss_pred CCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHH
Confidence 4689999999999999999999999999999999876655544433
No 43
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=85.78 E-value=5.8 Score=26.18 Aligned_cols=99 Identities=11% Similarity=0.098 Sum_probs=62.3
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchh-----hhhhhhhccCCCCCCCceEEecCCCCCCCCCCCC
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYH-----KRVVESLQGKNYLEEQIRLVSIPDGMEPWEDRND 77 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 77 (128)
+..|+++...|.|=..-.+.+|.+.+.+|.+|-|+..-... ..+... -.+++.....++.- ...+
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~--------L~v~~~~~g~gf~~--~~~~ 97 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEP--------HGVEFQVMATGFTW--ETQN 97 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGG--------GTCEEEECCTTCCC--CGGG
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHh--------CCcEEEEccccccc--CCCC
Confidence 34789999999999999999999999999999999654321 112121 13677776654432 1112
Q ss_pred HHHHHHHHHHHchHHHHHHHHHHhcCCCCCccEEEeCCCcc
Q 040997 78 FGKLIENFLQVMPGKLEKLIEEINSREDEKIDCFIADGNMG 118 (128)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~ 118 (128)
..+- .......++...+.+.+ .++|+||.|-+.+
T Consensus 98 ~~~~----~~~a~~~l~~a~~~l~~---~~yDlvILDEi~~ 131 (196)
T 1g5t_A 98 READ----TAACMAVWQHGKRMLAD---PLLDMVVLDELTY 131 (196)
T ss_dssp HHHH----HHHHHHHHHHHHHHTTC---TTCSEEEEETHHH
T ss_pred cHHH----HHHHHHHHHHHHHHHhc---CCCCEEEEeCCCc
Confidence 1111 11223345555566543 5799999998643
No 44
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=85.46 E-value=1.1 Score=33.97 Aligned_cols=37 Identities=22% Similarity=0.321 Sum_probs=27.2
Q ss_pred CCeEEEEc---CCC--cCCh-HHHHHHHHHHHHCCCeEEEEeC
Q 040997 3 SPHVLVMP---GPA--QGHV-IPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 3 ~~hvl~~p---~p~--~GH~-~P~l~la~~L~~rG~~Vt~~~t 39 (128)
++||+++. +|. .|=+ .=+-.|+++|+++||+|+++++
T Consensus 9 ~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P 51 (536)
T 3vue_A 9 HMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISP 51 (536)
T ss_dssp CCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred CcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEec
Confidence 56899995 332 1222 3356899999999999999985
No 45
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=84.95 E-value=1.8 Score=27.97 Aligned_cols=36 Identities=25% Similarity=0.467 Sum_probs=29.8
Q ss_pred CeEEEEcCCCcCCh-----HHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 4 PHVLVMPGPAQGHV-----IPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 4 ~hvl~~p~p~~GH~-----~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
..|+++| |+|=. .+.-+|++.|..+|.+|.|.+-|-
T Consensus 24 ~~ViIvP--GYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 64 (180)
T 1pno_A 24 SKVIIVP--GYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 64 (180)
T ss_dssp SEEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 4678887 66644 699999999999999999988764
No 46
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=84.89 E-value=2 Score=27.89 Aligned_cols=42 Identities=12% Similarity=0.062 Sum_probs=32.3
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchhhhh
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRV 46 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~ 46 (128)
.||++.-..+.|=+ =..+|.++|.++|++|.++.|+.-.+.+
T Consensus 6 k~IllgvTGs~aa~-k~~~ll~~L~~~g~~V~vv~T~~A~~fi 47 (175)
T 3qjg_A 6 ENVLICLCGSVNSI-NISHYIIELKSKFDEVNVIASTNGRKFI 47 (175)
T ss_dssp CEEEEEECSSGGGG-GHHHHHHHHTTTCSEEEEEECTGGGGGS
T ss_pred CEEEEEEeCHHHHH-HHHHHHHHHHHCCCEEEEEECcCHHHHh
Confidence 47776665555544 4899999999999999999998766543
No 47
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=84.09 E-value=2.2 Score=28.51 Aligned_cols=42 Identities=17% Similarity=0.256 Sum_probs=34.0
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchhhhh
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRV 46 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~ 46 (128)
+.+|++.-..+.+-+. ..+|.++|.++| +|.++.|+.-.+.+
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv 60 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFL 60 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTC
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhc
Confidence 4578888777777666 899999999999 99999998766544
No 48
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=83.92 E-value=8.9 Score=26.80 Aligned_cols=38 Identities=13% Similarity=0.112 Sum_probs=25.9
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHC-CCeEEEEeCcch
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKH-GFRVTFVNTDYY 42 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~r-G~~Vt~~~t~~~ 42 (128)
++|+++... .+.......|++.|.++ ||+|.++++...
T Consensus 6 mkIl~v~~~-~~~~~~~~~l~~~L~~~~g~~v~~~~~~~~ 44 (376)
T 1v4v_A 6 KRVVLAFGT-RPEATKMAPVYLALRGIPGLKPLVLLTGQH 44 (376)
T ss_dssp EEEEEEECS-HHHHHHHHHHHHHHHTSTTEEEEEEECSSC
T ss_pred eEEEEEEec-cHHHHHHHHHHHHHHhCCCCceEEEEcCCc
Confidence 478888732 22334456789999988 799888776543
No 49
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=83.09 E-value=2.3 Score=27.62 Aligned_cols=36 Identities=19% Similarity=0.433 Sum_probs=29.5
Q ss_pred CeEEEEcCCCcCCh-----HHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 4 PHVLVMPGPAQGHV-----IPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 4 ~hvl~~p~p~~GH~-----~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
..|+++| |+|=. .+.-+|++.|..+|.+|.|.+-|-
T Consensus 23 ~~ViIvP--GYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 63 (184)
T 1d4o_A 23 NSIIITP--GYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPV 63 (184)
T ss_dssp SEEEEEE--CHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 4678887 55543 699999999999999999987763
No 50
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=82.31 E-value=2.3 Score=27.64 Aligned_cols=36 Identities=25% Similarity=0.420 Sum_probs=29.6
Q ss_pred CeEEEEcCCCcCCh-----HHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 4 PHVLVMPGPAQGHV-----IPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 4 ~hvl~~p~p~~GH~-----~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
..|+++| |+|=. .+.-+|++.|..+|.+|.|.+-|.
T Consensus 31 ~~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 71 (186)
T 2bru_C 31 HSVIITP--GYGMAVAQAQYPVAEITEKLRARGINVRFGIHPV 71 (186)
T ss_dssp SEEEEEC--SBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSS
T ss_pred CeEEEEC--ChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 4677877 66644 699999999999999999987764
No 51
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=82.27 E-value=2.5 Score=27.95 Aligned_cols=36 Identities=25% Similarity=0.467 Sum_probs=29.5
Q ss_pred CeEEEEcCCCcCCh-----HHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 4 PHVLVMPGPAQGHV-----IPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 4 ~hvl~~p~p~~GH~-----~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
.+|+++| |+|=. .+.-+|++.|.++|.+|.|.+-|-
T Consensus 47 ~~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 87 (203)
T 2fsv_C 47 SKVIIVP--GYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 87 (203)
T ss_dssp SEEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CcEEEEc--CchHhHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 4678887 56544 699999999999999999988764
No 52
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=82.13 E-value=2.5 Score=28.01 Aligned_cols=36 Identities=19% Similarity=0.429 Sum_probs=29.6
Q ss_pred CeEEEEcCCCcCCh-----HHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 4 PHVLVMPGPAQGHV-----IPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 4 ~hvl~~p~p~~GH~-----~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
.+|+++| |+|=. .+.-+|++.|.++|.+|.|.+-|-
T Consensus 46 ~~ViIVP--GYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 86 (207)
T 1djl_A 46 NSIIITP--GYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHPV 86 (207)
T ss_dssp SEEEEEE--CHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEEC--CchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCcc
Confidence 4678887 66544 689999999999999999988763
No 53
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=81.54 E-value=4.1 Score=26.65 Aligned_cols=44 Identities=18% Similarity=0.166 Sum_probs=34.7
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchhhhhhh
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVE 48 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~~~ 48 (128)
.||++.-..+.|-+ =..+|.++|.++|++|.++.|+.-...+..
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhhH
Confidence 36777776777755 478999999999999999999877655544
No 54
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=80.99 E-value=1.6 Score=31.54 Aligned_cols=36 Identities=19% Similarity=0.190 Sum_probs=25.0
Q ss_pred CCeEEEEc---CCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 3 SPHVLVMP---GPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 3 ~~hvl~~p---~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
.++|+++. +| .+.-.-...+++.|+++| +|++++.+
T Consensus 14 ~MkIl~is~~~~p-~~~~~~~~~l~~~l~~~G-~V~vi~~~ 52 (406)
T 2hy7_A 14 RPCYLVLSSHDFR-TPRRANIHFITDQLALRG-TTRFFSLR 52 (406)
T ss_dssp CSCEEEEESSCTT-SSSCCHHHHHHHHHHHHS-CEEEEECS
T ss_pred CceEEEEecccCC-ChhhhhHhHHHHHHHhCC-ceEEEEec
Confidence 46888887 44 222223456788999999 99999554
No 55
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=79.29 E-value=4.7 Score=26.64 Aligned_cols=42 Identities=14% Similarity=0.180 Sum_probs=32.4
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHC-CCeEEEEeCcchhhhhh
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKH-GFRVTFVNTDYYHKRVV 47 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~r-G~~Vt~~~t~~~~~~~~ 47 (128)
+|++.-..+.|-+. ..+|.++|.++ |++|.++.|+.-...+.
T Consensus 2 ~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~ 44 (197)
T 1sbz_A 2 KLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIE 44 (197)
T ss_dssp EEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHH
T ss_pred EEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhH
Confidence 56666655556555 89999999999 99999999987665544
No 56
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=79.06 E-value=2.7 Score=28.76 Aligned_cols=32 Identities=31% Similarity=0.403 Sum_probs=22.9
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
+|++.- +.|-+- -+|+++|.++||+|+.++-.
T Consensus 2 kILVTG--atGfIG--~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 2 RVLVGG--GTGFIG--TALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp EEEEET--TTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred EEEEEC--CCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 566554 445544 35789999999999998753
No 57
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=78.75 E-value=3.2 Score=27.64 Aligned_cols=41 Identities=10% Similarity=-0.064 Sum_probs=29.4
Q ss_pred CCCeEEEEcCCCcCChHH-HHHHHHHHHHCCCeEEEEeCcchh
Q 040997 2 SSPHVLVMPGPAQGHVIP-LLEFSQCLAKHGFRVTFVNTDYYH 43 (128)
Q Consensus 2 ~~~hvl~~p~p~~GH~~P-~l~la~~L~~rG~~Vt~~~t~~~~ 43 (128)
+..+|++.-.. .+...- ..+|.++|.++|++|.++.|+.-.
T Consensus 4 ~~k~IllgiTG-siaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 4 KGKRIGFGFTG-SHCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp TTCEEEEEECS-CGGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CCCEEEEEEEC-hHHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 34577665544 455665 889999999999999999988655
No 58
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=78.50 E-value=11 Score=27.34 Aligned_cols=41 Identities=24% Similarity=0.276 Sum_probs=25.1
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHC--CCeEEEEeCcch
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYY 42 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~r--G~~Vt~~~t~~~ 42 (128)
|++.+|+++.. ...-..=+..|.++|.++ |+++.++.|...
T Consensus 25 m~~~kI~~v~G-tr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h 67 (403)
T 3ot5_A 25 MAKIKVMSIFG-TRPEAIKMAPLVLALEKEPETFESTVVITAQH 67 (403)
T ss_dssp -CCEEEEEEEC-SHHHHHHHHHHHHHHHTCTTTEEEEEEECC--
T ss_pred cccceEEEEEe-cChhHHHHHHHHHHHHhCCCCCcEEEEEecCc
Confidence 44457877772 233344456678888877 688887777644
No 59
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=77.31 E-value=2.8 Score=25.85 Aligned_cols=36 Identities=14% Similarity=0.295 Sum_probs=27.5
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchh
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYH 43 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~ 43 (128)
+++++. .|.| +.|++.+++.|.++|.+|+++ ...+.
T Consensus 20 ~~llIa-GG~G-iaPl~sm~~~l~~~~~~v~l~-g~R~~ 55 (142)
T 3lyu_A 20 KILAIG-AYTG-IVEVYPIAKAWQEIGNDVTTL-HVTFE 55 (142)
T ss_dssp EEEEEE-ETTH-HHHHHHHHHHHHHTTCEEEEE-EEEEG
T ss_pred eEEEEE-CcCc-HHHHHHHHHHHHhcCCcEEEE-EeCCH
Confidence 566665 3333 799999999999999999998 55443
No 60
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=77.20 E-value=4.3 Score=26.86 Aligned_cols=41 Identities=20% Similarity=0.061 Sum_probs=31.1
Q ss_pred CCeEEEEcCCCcCChH-HHHHHHHHHHHCCCeEEEEeCcchhh
Q 040997 3 SPHVLVMPGPAQGHVI-PLLEFSQCLAKHGFRVTFVNTDYYHK 44 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~-P~l~la~~L~~rG~~Vt~~~t~~~~~ 44 (128)
..+|++.-. |.+... =.++|.++|.++|++|.++.|+.-.+
T Consensus 7 ~k~I~lgiT-Gs~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~ 48 (201)
T 3lqk_A 7 GKHVGFGLT-GSHCTYHEVLPQMERLVELGAKVTPFVTHTVQT 48 (201)
T ss_dssp TCEEEEECC-SCGGGGGGTHHHHHHHHHTTCEEEEECSSCSCC
T ss_pred CCEEEEEEE-ChHHHHHHHHHHHHHHhhCCCEEEEEEChhHHH
Confidence 456766554 445555 78999999999999999998876543
No 61
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=76.24 E-value=2.3 Score=28.05 Aligned_cols=43 Identities=9% Similarity=0.011 Sum_probs=32.0
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchhhhh
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRV 46 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~ 46 (128)
..+|++.-..+.|=+ =..+|.++|.++|++|.++.|+.-.+.+
T Consensus 8 ~k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi 50 (194)
T 1p3y_1 8 DKKLLIGICGSISSV-GISSYLLYFKSFFKEIRVVMTKTAEDLI 50 (194)
T ss_dssp GCEEEEEECSCGGGG-GTHHHHHHHTTTSSEEEEEECHHHHHHS
T ss_pred CCEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHH
Confidence 347766665555545 4789999999999999999998665443
No 62
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=74.10 E-value=3.9 Score=27.16 Aligned_cols=43 Identities=23% Similarity=0.173 Sum_probs=30.6
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHH-CCCeEEEEeCcchhhhh
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAK-HGFRVTFVNTDYYHKRV 46 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~-rG~~Vt~~~t~~~~~~~ 46 (128)
+.+|++.-..+.+ ..=..+|.++|.+ +|++|.++.|+.-.+.+
T Consensus 19 ~k~IllgvTGsia-a~k~~~lv~~L~~~~g~~V~vv~T~~A~~fi 62 (206)
T 1qzu_A 19 KFHVLVGVTGSVA-ALKLPLLVSKLLDIPGLEVAVVTTERAKHFY 62 (206)
T ss_dssp SEEEEEEECSSGG-GGTHHHHHHHHC---CEEEEEEECTGGGGSS
T ss_pred CCEEEEEEeChHH-HHHHHHHHHHHhcccCCEEEEEECHhHHHHh
Confidence 4567766655555 4456999999998 89999999998766544
No 63
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=73.84 E-value=6.3 Score=30.43 Aligned_cols=43 Identities=7% Similarity=0.014 Sum_probs=37.0
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchhhh
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKR 45 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~ 45 (128)
+.+||+.+.++-.|-....-++..|..+|++|..+-.......
T Consensus 98 ~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~ 140 (579)
T 3bul_A 98 NGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEK 140 (579)
T ss_dssp SCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHH
T ss_pred CCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHH
Confidence 4689999999999999999999999999999999866544433
No 64
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=73.80 E-value=8 Score=22.81 Aligned_cols=33 Identities=15% Similarity=0.363 Sum_probs=24.1
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
.++|+++- .|.+-- .+++.|.++|++|+++...
T Consensus 4 ~m~i~IiG---~G~iG~--~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAG---IGRVGY--TLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEEC---CSHHHH--HHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEEC---CCHHHH--HHHHHHHhCCCeEEEEECC
Confidence 45788773 466643 5789999999999988654
No 65
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=73.38 E-value=22 Score=25.50 Aligned_cols=40 Identities=18% Similarity=0.172 Sum_probs=26.1
Q ss_pred CCCeEEEEcCCCcCChHHHHHHHHHHHHC-CCeEEEEeCcch
Q 040997 2 SSPHVLVMPGPAQGHVIPLLEFSQCLAKH-GFRVTFVNTDYY 42 (128)
Q Consensus 2 ~~~hvl~~p~p~~GH~~P~l~la~~L~~r-G~~Vt~~~t~~~ 42 (128)
+..+|+++. .......=+..|.++|.++ |+++.++.|...
T Consensus 24 ~m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h 64 (396)
T 3dzc_A 24 AMKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQH 64 (396)
T ss_dssp CCEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSS
T ss_pred CCCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEeccc
Confidence 345777776 3334455556678888876 788877777554
No 66
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=73.08 E-value=5 Score=25.46 Aligned_cols=41 Identities=24% Similarity=0.220 Sum_probs=31.1
Q ss_pred EcCCCc-CChHHHHHHHHHHHHCCCeEEEEeCcchhhhhhhh
Q 040997 9 MPGPAQ-GHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVES 49 (128)
Q Consensus 9 ~p~p~~-GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~~~~ 49 (128)
+-.|-. --+--.+-++.+|..+|++||+..+++-.+.+..+
T Consensus 13 LGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLleva 54 (157)
T 1kjn_A 13 LGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQVA 54 (157)
T ss_dssp CCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHH
T ss_pred ecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhheecc
Confidence 334444 33455688999999999999999999988776554
No 67
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=72.56 E-value=8.2 Score=26.11 Aligned_cols=38 Identities=18% Similarity=0.295 Sum_probs=33.2
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
..|++.--||.|=-.-++.+|..|+++|.+|.+.....
T Consensus 7 l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 7 LKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp EEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred EEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 36778888899999999999999999999998877754
No 68
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=71.35 E-value=7.6 Score=24.50 Aligned_cols=36 Identities=22% Similarity=0.315 Sum_probs=25.2
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
|..++|++.- +.|-+- ..++++|.++|++|+.+.-.
T Consensus 1 M~~~~ilVtG--atG~iG--~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 1 MAVKKIAIFG--ATGQTG--LTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CCCCEEEEES--TTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEEEc--CCcHHH--HHHHHHHHHCCCeEEEEEeC
Confidence 5556676664 334332 57889999999999988654
No 69
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=70.19 E-value=6.5 Score=27.89 Aligned_cols=46 Identities=20% Similarity=0.171 Sum_probs=38.6
Q ss_pred CCCeEEEEcCCCcCChHHHHHHHHHHHHC--CCeEEEEeCcchhhhhh
Q 040997 2 SSPHVLVMPGPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYYHKRVV 47 (128)
Q Consensus 2 ~~~hvl~~p~p~~GH~~P~l~la~~L~~r--G~~Vt~~~t~~~~~~~~ 47 (128)
+..+|+++-..+.|.+.=...+.+.|.++ +.+|++++.+.+...+.
T Consensus 7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~ 54 (349)
T 3tov_A 7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVME 54 (349)
T ss_dssp TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTS
T ss_pred CCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHh
Confidence 34689999999999998888888888876 89999999988875543
No 70
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=69.82 E-value=4.3 Score=28.35 Aligned_cols=39 Identities=15% Similarity=0.100 Sum_probs=29.2
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHC-C-CeEEEEeCcch
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKH-G-FRVTFVNTDYY 42 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~r-G-~~Vt~~~t~~~ 42 (128)
+++|+++. ...++......+++.|.++ | ++|+++++...
T Consensus 8 ~mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~~ 48 (375)
T 3beo_A 8 RLKVMTIF-GTRPEAIKMAPLVLELQKHPEKIESIVTVTAQH 48 (375)
T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEEEEEEECCSS
T ss_pred CceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCCC
Confidence 46899887 3356777888999999887 4 88877776543
No 71
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=69.27 E-value=4.6 Score=28.55 Aligned_cols=29 Identities=31% Similarity=0.426 Sum_probs=22.5
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEE
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFV 37 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~ 37 (128)
+||++|-..-.| +-+|..|+++|++|+++
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEE
Confidence 578877643335 67788899999999998
No 72
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=68.93 E-value=5.7 Score=23.92 Aligned_cols=31 Identities=23% Similarity=0.250 Sum_probs=20.9
Q ss_pred HHHHHHHHhcCCCCCccEEEeCCCccc--HHHHHHh
Q 040997 93 LEKLIEEINSREDEKIDCFIADGNMGW--SLEVAKK 126 (128)
Q Consensus 93 ~~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~vA~~ 126 (128)
-++.++.+.+ .+||+||.|..++- +.+++++
T Consensus 42 g~eAl~~~~~---~~~DlvllDi~mP~~~G~el~~~ 74 (123)
T 2lpm_A 42 MQEALDIARK---GQFDIAIIDVNLDGEPSYPVADI 74 (123)
T ss_dssp HHHHHHHHHH---CCSSEEEECSSSSSCCSHHHHHH
T ss_pred HHHHHHHHHh---CCCCEEEEecCCCCCCHHHHHHH
Confidence 3455555554 58999999998863 4566554
No 73
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=68.21 E-value=5.2 Score=27.13 Aligned_cols=26 Identities=23% Similarity=0.420 Sum_probs=20.0
Q ss_pred cCChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 14 QGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 14 ~GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
.|-+- ..+|+.++.+|++||++..+.
T Consensus 28 SG~mG--~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGHLG--KIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCHHH--HHHHHHHHHTTCEEEEEECTT
T ss_pred CCHHH--HHHHHHHHHCCCEEEEEeCCc
Confidence 45443 457999999999999997653
No 74
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=67.92 E-value=3.9 Score=26.30 Aligned_cols=18 Identities=28% Similarity=0.464 Sum_probs=15.9
Q ss_pred HHHHHHHHHCCCeEEEEe
Q 040997 21 LEFSQCLAKHGFRVTFVN 38 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~ 38 (128)
+.+|..|+++|++|+++=
T Consensus 15 L~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 15 LSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp HHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHCCCCEEEEE
Confidence 678899999999999984
No 75
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=67.70 E-value=20 Score=22.59 Aligned_cols=30 Identities=20% Similarity=0.547 Sum_probs=26.2
Q ss_pred CCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 11 GPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 11 ~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
-+|.|=-.-...||..|+.+|.+|.++-..
T Consensus 10 kgG~GKTt~a~~la~~la~~g~~vlliD~D 39 (206)
T 4dzz_A 10 KGGSGKTTAVINIATALSRSGYNIAVVDTD 39 (206)
T ss_dssp STTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCccHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 456788899999999999999999988765
No 76
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=67.63 E-value=5.5 Score=28.04 Aligned_cols=41 Identities=17% Similarity=0.136 Sum_probs=28.5
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchhhhh
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRV 46 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~ 46 (128)
|..++|.++-....| ..+|..|++.|++|+++.-+...+.+
T Consensus 1 M~~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~~~~~~~ 41 (335)
T 3ghy_A 1 MSLTRICIVGAGAVG-----GYLGARLALAGEAINVLARGATLQAL 41 (335)
T ss_dssp -CCCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCHHHHHHH
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEEChHHHHHH
Confidence 667788888654445 34688999999999999865333333
No 77
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=67.06 E-value=11 Score=24.49 Aligned_cols=44 Identities=11% Similarity=0.104 Sum_probs=32.0
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchhhhh
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRV 46 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~ 46 (128)
|.+ ||++.-..+.|=+ =..++.++|.++|++|.++.|+.-.+.+
T Consensus 1 ~~k-~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi 44 (181)
T 1g63_A 1 MYG-KLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFI 44 (181)
T ss_dssp CCC-CEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTS
T ss_pred CCC-EEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHH
Confidence 444 5666554554444 6789999999999999999998766544
No 78
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=66.97 E-value=3.3 Score=31.11 Aligned_cols=35 Identities=14% Similarity=0.375 Sum_probs=26.3
Q ss_pred CCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 2 SSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 2 ~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
+++|||++-...-| +.+|++|..+|++||++....
T Consensus 41 ~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 41 DKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCC
Confidence 46799998743334 567899999999999987653
No 79
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=66.65 E-value=13 Score=26.13 Aligned_cols=43 Identities=23% Similarity=0.295 Sum_probs=32.0
Q ss_pred CCCCeEEEEcCC---CcCChHHHHHHHHHHHHCCCeEEEEeCcchh
Q 040997 1 MSSPHVLVMPGP---AQGHVIPLLEFSQCLAKHGFRVTFVNTDYYH 43 (128)
Q Consensus 1 m~~~hvl~~p~p---~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~ 43 (128)
|.+++.+|+... +.|-=.-.-.|++.|.+||++||..-...+.
T Consensus 20 ~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPYl 65 (295)
T 2vo1_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYI 65 (295)
T ss_dssp -CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECSS
T ss_pred cccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecccce
Confidence 556677787743 3355578889999999999999998666543
No 80
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=65.01 E-value=10 Score=26.63 Aligned_cols=33 Identities=12% Similarity=0.153 Sum_probs=26.9
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
.||.|+-..+.| |-.+|+.|.++|++|+..=..
T Consensus 5 ~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~~ 37 (326)
T 3eag_A 5 KHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDAK 37 (326)
T ss_dssp CEEEEESCCSHH----HHHHHHHHHHTTCEEEEEESS
T ss_pred cEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcCC
Confidence 478888887777 557999999999999997543
No 81
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=64.73 E-value=6.1 Score=23.72 Aligned_cols=33 Identities=15% Similarity=0.119 Sum_probs=24.5
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
.||+++-+ |.+ -..+++.|.++|++|+++-...
T Consensus 7 ~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECCH
Confidence 47888754 544 2568999999999999886543
No 82
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=64.28 E-value=5.3 Score=28.36 Aligned_cols=22 Identities=14% Similarity=0.226 Sum_probs=18.6
Q ss_pred HHHHHHHHHCCCeEEEEeCcch
Q 040997 21 LEFSQCLAKHGFRVTFVNTDYY 42 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~~~ 42 (128)
..+|+.+..+|++||+++.+..
T Consensus 69 ~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 69 ATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp HHHHHHHHHTTCEEEEEEETTS
T ss_pred HHHHHHHHHCCCEEEEEecCCC
Confidence 3578999999999999988654
No 83
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=64.15 E-value=13 Score=22.69 Aligned_cols=34 Identities=15% Similarity=0.205 Sum_probs=24.4
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
..+|+++- .|.+- ..+++.|..+|++|+++....
T Consensus 19 ~~~v~IiG---~G~iG--~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFG---CGRLG--SLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEEC---CSHHH--HHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEEC---CCHHH--HHHHHHHHhCCCeEEEEECCH
Confidence 35788774 35544 457889999999999886543
No 84
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=63.98 E-value=6.8 Score=27.46 Aligned_cols=35 Identities=26% Similarity=0.224 Sum_probs=24.2
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
|+.++|.++-....| ..+|..|++.|++|+++...
T Consensus 2 m~~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 2 IESKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCcCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 556788888643334 24688899999999988653
No 85
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=63.62 E-value=9.1 Score=27.11 Aligned_cols=38 Identities=8% Similarity=0.132 Sum_probs=27.8
Q ss_pred CeEEEEc--CCC-cCChHHHHHHHHHHHHCCCeEEEEeCcch
Q 040997 4 PHVLVMP--GPA-QGHVIPLLEFSQCLAKHGFRVTFVNTDYY 42 (128)
Q Consensus 4 ~hvl~~p--~p~-~GH~~P~l~la~~L~~rG~~Vt~~~t~~~ 42 (128)
++|+++. +|. .|--.=+..|++.|+++ |+|++++....
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~ 41 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHAF 41 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESCC
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecCC
Confidence 3677764 333 35556788999999999 99999876544
No 86
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=63.44 E-value=32 Score=23.30 Aligned_cols=32 Identities=22% Similarity=0.418 Sum_probs=22.1
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
++++|.-.+. -+ =..+|++|+++|++|.++.-
T Consensus 30 k~~lVTGas~-GI--G~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 30 PVAIVTGGRR-GI--GLGIARALAASGFDIAITGI 61 (280)
T ss_dssp CEEEEETTTS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEecCCC-HH--HHHHHHHHHHCCCeEEEEeC
Confidence 5566664333 22 25789999999999988763
No 87
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=62.90 E-value=9.7 Score=26.20 Aligned_cols=36 Identities=19% Similarity=0.252 Sum_probs=23.9
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
|+..+|++.- +.|-+- .+|+++|+++|++|+.+.-.
T Consensus 1 m~~~~vlVtG--atG~iG--~~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 1 MSGKRALITG--IRGQDG--AYLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp --CCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEECSC
T ss_pred CCCCEEEEEC--CCChHH--HHHHHHHHHCCCEEEEEECC
Confidence 5556676664 444443 46889999999999987543
No 88
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=62.67 E-value=12 Score=25.95 Aligned_cols=43 Identities=9% Similarity=0.121 Sum_probs=35.0
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHC--CCeEEEEeCcchhhhh
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYYHKRV 46 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~r--G~~Vt~~~t~~~~~~~ 46 (128)
++|+++-.-+.|.+.=...+.+.|.++ +.+|++++.+.+...+
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~ 45 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLL 45 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHH
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHH
Confidence 379999988779998888888888876 8999999998765443
No 89
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=61.59 E-value=14 Score=21.28 Aligned_cols=29 Identities=7% Similarity=0.017 Sum_probs=23.7
Q ss_pred CChHHHHHHHHHHHHC-CC-eEEEEeCcchh
Q 040997 15 GHVIPLLEFSQCLAKH-GF-RVTFVNTDYYH 43 (128)
Q Consensus 15 GH~~P~l~la~~L~~r-G~-~Vt~~~t~~~~ 43 (128)
......+.+|..+++. |+ +|+++-...-.
T Consensus 16 ~~~~~al~~a~~~~~~~g~~~v~vff~~dgV 46 (117)
T 1jx7_A 16 ESLFNSLRLAIALREQESNLDLRLFLMSDAV 46 (117)
T ss_dssp SHHHHHHHHHHHHHHHCTTCEEEEEECGGGG
T ss_pred HHHHHHHHHHHHHHhcCCCccEEEEEEchHH
Confidence 5567789999999998 99 99998776544
No 90
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=61.27 E-value=18 Score=24.28 Aligned_cols=35 Identities=29% Similarity=0.415 Sum_probs=25.3
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
|..++|++.- + |-+- ..|+++|.++|++|+.+.-.
T Consensus 1 M~~~~ilVtG--a-G~iG--~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 1 MSLSKILIAG--C-GDLG--LELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp -CCCCEEEEC--C-SHHH--HHHHHHHHHTTCCEEEEECT
T ss_pred CCCCcEEEEC--C-CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 6667888774 3 5433 46889999999999988653
No 91
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=61.04 E-value=33 Score=22.89 Aligned_cols=31 Identities=13% Similarity=0.177 Sum_probs=22.2
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEe
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~ 38 (128)
++++|.-.+.| + =..+|++|+++|++|.++.
T Consensus 12 k~vlVTGas~G-I--G~aia~~la~~G~~V~~~~ 42 (262)
T 3ksu_A 12 KVIVIAGGIKN-L--GALTAKTFALESVNLVLHY 42 (262)
T ss_dssp CEEEEETCSSH-H--HHHHHHHHTTSSCEEEEEE
T ss_pred CEEEEECCCch-H--HHHHHHHHHHCCCEEEEEe
Confidence 56666644443 2 3678999999999998864
No 92
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=60.89 E-value=35 Score=22.95 Aligned_cols=31 Identities=19% Similarity=0.186 Sum_probs=21.5
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEe
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~ 38 (128)
++++|.-.+. -+ =..+|++|+++|++|.++.
T Consensus 16 k~~lVTGas~-gI--G~a~a~~la~~G~~V~~~~ 46 (280)
T 3pgx_A 16 RVAFITGAAR-GQ--GRSHAVRLAAEGADIIACD 46 (280)
T ss_dssp CEEEEESTTS-HH--HHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCc-HH--HHHHHHHHHHCCCEEEEEe
Confidence 4566664333 22 2578999999999998875
No 93
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=60.50 E-value=8 Score=23.34 Aligned_cols=34 Identities=15% Similarity=0.138 Sum_probs=25.1
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcch
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYY 42 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~ 42 (128)
.||+++-+.-.| ..+++.|.++|++|+++.....
T Consensus 8 ~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 8 NHALLVGYGRVG-----SLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp SCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCHH
T ss_pred CCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECCHH
Confidence 478877643334 4688999999999999877643
No 94
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=60.27 E-value=11 Score=25.43 Aligned_cols=37 Identities=27% Similarity=0.372 Sum_probs=27.9
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcch
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYY 42 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~ 42 (128)
.+++++. .|.| +.|++.+.+.|..+|.+|+++....+
T Consensus 111 ~~~llia-gGtG-itP~~s~l~~l~~~~~~v~l~~~~r~ 147 (262)
T 1ep3_B 111 DKILIIG-GGIG-VPPLYELAKQLEKTGCQMTILLGFAS 147 (262)
T ss_dssp SEEEEEE-EGGG-SHHHHHHHHHHHHHTCEEEEEEEESS
T ss_pred CeEEEEE-CcCc-HHHHHHHHHHHHHcCCeEEEEEEcCC
Confidence 4566665 4455 89999999999988888888765443
No 95
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=59.34 E-value=14 Score=25.46 Aligned_cols=43 Identities=16% Similarity=0.238 Sum_probs=36.6
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHC--CCeEEEEeCcchhhhh
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDYYHKRV 46 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~r--G~~Vt~~~t~~~~~~~ 46 (128)
++|+++-..+.|.+.=...+.+.|.++ +.+|++++.+.+...+
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~ 45 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIP 45 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHH
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHH
Confidence 379999988889998888889999876 8999999998876544
No 96
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=59.33 E-value=26 Score=24.31 Aligned_cols=38 Identities=21% Similarity=0.213 Sum_probs=23.3
Q ss_pred CCCCeEEEEc-CCCcCChHHHH--HHHHHHHHCCCeEEEEe
Q 040997 1 MSSPHVLVMP-GPAQGHVIPLL--EFSQCLAKHGFRVTFVN 38 (128)
Q Consensus 1 m~~~hvl~~p-~p~~GH~~P~l--~la~~L~~rG~~Vt~~~ 38 (128)
|+.++||+|- -|-.+.+|-.+ .+.+.|.+.|++|+++-
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~D 60 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSD 60 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 6677888775 33334344322 35577778999999974
No 97
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=58.50 E-value=36 Score=22.36 Aligned_cols=36 Identities=17% Similarity=0.270 Sum_probs=24.0
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
|-..++++|.-.+. -+ =..++++|+++|++|.++..
T Consensus 1 Ml~~k~~lVTGas~-gI--G~~ia~~l~~~G~~V~~~~~ 36 (246)
T 3osu_A 1 MKMTKSALVTGASR-GI--GRSIALQLAEEGYNVAVNYA 36 (246)
T ss_dssp CCCSCEEEETTCSS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEECCCC-hH--HHHHHHHHHHCCCEEEEEeC
Confidence 44445666664333 22 25789999999999988654
No 98
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=58.22 E-value=14 Score=25.75 Aligned_cols=36 Identities=25% Similarity=0.319 Sum_probs=26.4
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCC-eEEEEeCc
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGF-RVTFVNTD 40 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~-~Vt~~~t~ 40 (128)
++|+++.. ..++...+..|+++|.++|+ ++.++.+.
T Consensus 1 mkIl~v~~-~~~~~~~~~~l~~~L~~~g~~~~~v~~~~ 37 (384)
T 1vgv_A 1 MKVLTVFG-TRPEAIKMAPLVHALAKDPFFEAKVCVTA 37 (384)
T ss_dssp CEEEEEEC-SHHHHHHHHHHHHHHHHSTTCEEEEEECC
T ss_pred CeEEEEec-ccHHHHHHHHHHHHHHhCCCCceEEEEcC
Confidence 36777753 34667778899999999994 88776554
No 99
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=57.97 E-value=25 Score=21.22 Aligned_cols=38 Identities=8% Similarity=0.002 Sum_probs=28.2
Q ss_pred eEEEEcCCC---cCChHHHHHHHHHHHHCCCeEEEEeCcch
Q 040997 5 HVLVMPGPA---QGHVIPLLEFSQCLAKHGFRVTFVNTDYY 42 (128)
Q Consensus 5 hvl~~p~p~---~GH~~P~l~la~~L~~rG~~Vt~~~t~~~ 42 (128)
+++++-.-+ .......+.+|...++.|++|+++-+..-
T Consensus 17 kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dG 57 (134)
T 3mc3_A 17 XILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXG 57 (134)
T ss_dssp EEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTG
T ss_pred eEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCc
Confidence 455554433 35678999999999999999998776543
No 100
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=57.34 E-value=8.8 Score=30.87 Aligned_cols=37 Identities=19% Similarity=0.388 Sum_probs=25.4
Q ss_pred CeEEEEcCCCc-------------CChHHHH--------HHHHHHHHCCCeEE----EEeCc
Q 040997 4 PHVLVMPGPAQ-------------GHVIPLL--------EFSQCLAKHGFRVT----FVNTD 40 (128)
Q Consensus 4 ~hvl~~p~p~~-------------GH~~P~l--------~la~~L~~rG~~Vt----~~~t~ 40 (128)
.+|+++..-|. |...=.+ +||++|+++||+|| ++|-.
T Consensus 279 ~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~ 340 (816)
T 3s28_A 279 FNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRL 340 (816)
T ss_dssp CEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEEC
T ss_pred eEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCC
Confidence 47888876553 4444555 58888889999987 66544
No 101
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=56.92 E-value=19 Score=24.81 Aligned_cols=35 Identities=9% Similarity=0.115 Sum_probs=26.6
Q ss_pred CCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcch
Q 040997 2 SSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYY 42 (128)
Q Consensus 2 ~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~ 42 (128)
.+++|+++-.. ....+++.+.++|++|.++.....
T Consensus 1 m~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~~ 35 (334)
T 2r85_A 1 MKVRIATYASH------SALQILKGAKDEGFETIAFGSSKV 35 (334)
T ss_dssp CCSEEEEESST------THHHHHHHHHHTTCCEEEESCGGG
T ss_pred CceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCCC
Confidence 04578887743 567889999999999988877643
No 102
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=55.98 E-value=23 Score=21.72 Aligned_cols=42 Identities=12% Similarity=0.182 Sum_probs=31.4
Q ss_pred eEEEEcCCC-cCChHHHHHHHHHHHHCCCeEEEEeCcchhhhh
Q 040997 5 HVLVMPGPA-QGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRV 46 (128)
Q Consensus 5 hvl~~p~p~-~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~ 46 (128)
+++++-.-+ .-.+.+.+.+|...++.|++|+++-|..-...+
T Consensus 9 kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~~l 51 (144)
T 2qs7_A 9 KLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQAI 51 (144)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHT
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHHHH
Confidence 455555444 466789999999999999999999887655443
No 103
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=55.88 E-value=12 Score=25.21 Aligned_cols=20 Identities=25% Similarity=0.399 Sum_probs=16.7
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..+|++|+.+|++|+++..+
T Consensus 38 ~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 38 FAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp HHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHCCCEEEEEECC
Confidence 46889999999999998543
No 104
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=55.35 E-value=10 Score=23.02 Aligned_cols=21 Identities=24% Similarity=0.352 Sum_probs=15.4
Q ss_pred CCccEEEeCCCccc--HHHHHHh
Q 040997 106 EKIDCFIADGNMGW--SLEVAKK 126 (128)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~vA~~ 126 (128)
.+||+||.|..++- +..++++
T Consensus 56 ~~~DlillD~~MP~mdG~el~~~ 78 (134)
T 3to5_A 56 GDFDFVVTDWNMPGMQGIDLLKN 78 (134)
T ss_dssp HCCSEEEEESCCSSSCHHHHHHH
T ss_pred CCCCEEEEcCCCCCCCHHHHHHH
Confidence 47999999998864 5555554
No 105
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=54.57 E-value=38 Score=22.82 Aligned_cols=41 Identities=29% Similarity=0.469 Sum_probs=26.9
Q ss_pred CCCCeEEEEcCCCcC------C-----hHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 1 MSSPHVLVMPGPAQG------H-----VIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 1 m~~~hvl~~p~p~~G------H-----~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
|...+|+++-....+ + ..=++.--..|.+.|++|++++...
T Consensus 1 m~m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~g 52 (244)
T 3kkl_A 1 MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETG 52 (244)
T ss_dssp --CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 666788888764322 1 2455566677788999999998753
No 106
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=54.53 E-value=12 Score=26.87 Aligned_cols=35 Identities=20% Similarity=0.307 Sum_probs=25.4
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
|++.+|+++-... .=+..|..|+++|++||++-..
T Consensus 1 m~~~~v~iiG~G~-----~Gl~~A~~l~~~g~~v~v~E~~ 35 (384)
T 2bi7_A 1 MKSKKILIVGAGF-----SGAVIGRQLAEKGHQVHIIDQR 35 (384)
T ss_dssp -CCCEEEEECCSH-----HHHHHHHHHHTTTCEEEEEESS
T ss_pred CCcCCEEEECcCH-----HHHHHHHHHHHCCCcEEEEEec
Confidence 6777888876332 2456788999999999998654
No 107
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=54.09 E-value=12 Score=25.48 Aligned_cols=34 Identities=15% Similarity=0.185 Sum_probs=23.4
Q ss_pred CCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 2 SSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 2 ~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
+.++|.++-. |.+- ..+|+.|+++|++|+++...
T Consensus 2 ~~m~i~iiG~---G~~G--~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 2 NAMKIAIAGA---GAMG--SRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp --CEEEEECC---SHHH--HHHHHHHHHTTCEEEEECSC
T ss_pred CCCeEEEECc---CHHH--HHHHHHHHhCCCcEEEEECC
Confidence 4457888754 4442 35688999999999998653
No 108
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=53.45 E-value=19 Score=24.97 Aligned_cols=37 Identities=11% Similarity=-0.028 Sum_probs=24.4
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
|.+.+|++.- +.|.+- ..++++|.++|++|+.++-..
T Consensus 8 M~~~~IlVtG--atG~iG--~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLIAG--ATGFIG--QFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp ---CCEEEEC--TTSHHH--HHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCeEEEEC--CCcHHH--HHHHHHHHHCCCCEEEEECCC
Confidence 4445677765 445443 467889999999999987654
No 109
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=52.96 E-value=27 Score=23.76 Aligned_cols=41 Identities=20% Similarity=0.311 Sum_probs=29.7
Q ss_pred CCCCeEEEEc--CCCcCChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 1 MSSPHVLVMP--GPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 1 m~~~hvl~~p--~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
|..++++.+. -.|.|=-.-...||..|+.+|.+|.++=...
T Consensus 1 M~M~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 1 MAETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp ---CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 4445555553 4567999999999999999999998875554
No 110
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=52.94 E-value=17 Score=25.37 Aligned_cols=37 Identities=14% Similarity=0.257 Sum_probs=27.3
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCC-CeEEEEeCcch
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHG-FRVTFVNTDYY 42 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG-~~Vt~~~t~~~ 42 (128)
.+++++. .|.| +.|++.+.+.|..+| .+|+++....+
T Consensus 112 ~~~vlia-gG~G-ItP~~s~l~~l~~~~~~~v~l~~~~r~ 149 (321)
T 2pia_A 112 KSFILVA-GGIG-ITPMLSMARQLRAEGLRSFRLYYLTRD 149 (321)
T ss_dssp SEEEEEE-EGGG-HHHHHHHHHHHHHHCSSEEEEEEEESC
T ss_pred CCEEEEE-eccc-HhHHHHHHHHHHHcCCCcEEEEEEECC
Confidence 3566665 3445 899999999999888 78888765433
No 111
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=52.85 E-value=48 Score=22.08 Aligned_cols=35 Identities=17% Similarity=0.237 Sum_probs=23.6
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
+.++++|..... -+ =..++++|+++|++|.++...
T Consensus 24 ~~k~vlITGas~-gI--G~~~a~~l~~~G~~v~~~~~~ 58 (269)
T 3gk3_A 24 AKRVAFVTGGMG-GL--GAAISRRLHDAGMAVAVSHSE 58 (269)
T ss_dssp CCCEEEETTTTS-HH--HHHHHHHHHTTTCEEEEEECS
T ss_pred cCCEEEEECCCc-hH--HHHHHHHHHHCCCEEEEEcCC
Confidence 345666764433 22 257899999999999887643
No 112
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=52.42 E-value=26 Score=21.00 Aligned_cols=38 Identities=16% Similarity=0.302 Sum_probs=25.3
Q ss_pred CCCCeEEEEcCCCcCC-hHHHHHHHHHHHHCCCeEEEEe
Q 040997 1 MSSPHVLVMPGPAQGH-VIPLLEFSQCLAKHGFRVTFVN 38 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH-~~P~l~la~~L~~rG~~Vt~~~ 38 (128)
|.++.|+++...+.+. ..-+..+++.|+++|+.|..+.
T Consensus 2 ~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d 40 (176)
T 2qjw_A 2 MSRGHCILAHGFESGPDALKVTALAEVAERLGWTHERPD 40 (176)
T ss_dssp CSSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECCC
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEeC
Confidence 4566788887544322 2245689999999998765543
No 113
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=52.05 E-value=13 Score=23.76 Aligned_cols=32 Identities=16% Similarity=0.185 Sum_probs=22.4
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
+|++.- +.|-+- ..++++|+++|++|+.+.-.
T Consensus 2 kvlVtG--atG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 2 KIGIIG--ATGRAG--SRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp EEEEET--TTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred eEEEEc--CCchhH--HHHHHHHHhCCCEEEEEEcC
Confidence 455554 344443 47889999999999988654
No 114
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=52.04 E-value=14 Score=26.04 Aligned_cols=33 Identities=21% Similarity=0.310 Sum_probs=23.3
Q ss_pred CCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 2 SSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 2 ~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
+..+|+++-....| +.+|..|+++|++|+++--
T Consensus 10 ~~~dVvIVGaG~aG-----l~~A~~L~~~G~~v~viE~ 42 (379)
T 3alj_A 10 KTRRAEVAGGGFAG-----LTAAIALKQNGWDVRLHEK 42 (379)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCCEEEEec
Confidence 34567777643334 6778889999999999843
No 115
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=51.57 E-value=25 Score=24.06 Aligned_cols=34 Identities=29% Similarity=0.382 Sum_probs=23.1
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
..+|++.- +.|-+- .+|+++|+++|++|+.+.-.
T Consensus 11 ~~~vlVTG--atG~iG--~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 11 GSLVLVTG--ANGFVA--SHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp TCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEC--CccHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 34566554 444443 46789999999999987653
No 116
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=51.55 E-value=79 Score=24.16 Aligned_cols=100 Identities=12% Similarity=0.174 Sum_probs=55.9
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchhhhhhhhhccCCCCCCCceEEecCC--CCCCC---C-CCCCH
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIPD--GMEPW---E-DRNDF 78 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~---~-~~~~~ 78 (128)
+-+++.. .+=.-++++++.|...|++ ++.|....+.+... +|....+.+ ++|+- . .+-+
T Consensus 11 ~~aLISV---sDK~glvelAk~L~~lGfe--I~ATgGTak~L~e~---------GI~v~~V~~vTgfPEil~GRVKTLH- 75 (523)
T 3zzm_A 11 RRALISV---YDKTGLVDLAQGLSAAGVE--IISTGSTAKTIADT---------GIPVTPVEQLTGFPEVLDGRVKTLH- 75 (523)
T ss_dssp CEEEEEE---SSCTTHHHHHHHHHHTTCE--EEECHHHHHHHHTT---------TCCCEEHHHHHSCCCCTTTTSSSCS-
T ss_pred cEEEEEE---eccccHHHHHHHHHHCCCE--EEEcchHHHHHHHc---------CCceeeccccCCCchhhCCccccCC-
Confidence 3445554 2334588999999999998 56888877666553 566665542 45542 1 1112
Q ss_pred HHHHHHH--HHHchHHHHHHHHHHhcCCCCCccEEEeCCCcccHHHHH
Q 040997 79 GKLIENF--LQVMPGKLEKLIEEINSREDEKIDCFIADGNMGWSLEVA 124 (128)
Q Consensus 79 ~~~~~~~--~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~vA 124 (128)
..+.--. ++..++..++ +++..- .++|+||++.. ++-..|+
T Consensus 76 P~ihgGiLa~r~~~~h~~~-l~~~~i---~~iDlVvvNLY-PF~~tv~ 118 (523)
T 3zzm_A 76 PRVHAGLLADLRKSEHAAA-LEQLGI---EAFELVVVNLY-PFSQTVE 118 (523)
T ss_dssp HHHHHHHHCCTTSHHHHHH-HHHHTC---CCCSEEEEECC-CHHHHHH
T ss_pred chhhhhhccCCCCHHHHHH-HHHCCC---CceeEEEEeCC-ChHHHHh
Confidence 1122111 1233333333 333322 68999999975 4455554
No 117
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=51.44 E-value=21 Score=23.26 Aligned_cols=36 Identities=6% Similarity=-0.043 Sum_probs=26.3
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCC--CeEEEEeCcc
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHG--FRVTFVNTDY 41 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG--~~Vt~~~t~~ 41 (128)
.+++++. .|.| +.|++.+.+.|..+| .+|+++-...
T Consensus 103 ~~~vlia-gG~G-itP~~~~l~~l~~~~~~~~v~l~~~~r 140 (232)
T 1qfj_A 103 RPMILIA-GGTG-FSYARSILLTALARNPNRDITIYWGGR 140 (232)
T ss_dssp SCEEEEE-ETTC-HHHHHHHHHHHHHHCTTCCEEEEEEES
T ss_pred CcEEEEE-eccc-HhHHHHHHHHHHhcCCCCcEEEEEeeC
Confidence 3566665 3445 899999999998876 6788875443
No 118
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=51.38 E-value=56 Score=22.41 Aligned_cols=38 Identities=21% Similarity=0.412 Sum_probs=30.0
Q ss_pred CeEEEEc--CCCcCChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 4 PHVLVMP--GPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 4 ~hvl~~p--~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
.+++++. -++.|=-.=...||..|+.+|.+|-++-...
T Consensus 92 ~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 131 (286)
T 3la6_A 92 NNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDM 131 (286)
T ss_dssp CCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCT
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccC
Confidence 3555554 4667989999999999999999998886654
No 119
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=51.37 E-value=12 Score=25.39 Aligned_cols=33 Identities=27% Similarity=0.487 Sum_probs=26.1
Q ss_pred CeEEEEcCCCc--CChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 4 PHVLVMPGPAQ--GHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 4 ~hvl~~p~p~~--GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
.+|++++-+|- |. -+.+|++|+.+|++|+++..
T Consensus 59 ~~v~VlcG~GNNGGD---Glv~AR~L~~~G~~V~v~~~ 93 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGD---GLVCARHLKLFGYNPVVFYP 93 (246)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCCEEEECC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCeEEEEEc
Confidence 47888886663 33 37899999999999999855
No 120
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=51.10 E-value=20 Score=21.44 Aligned_cols=29 Identities=7% Similarity=0.007 Sum_probs=23.4
Q ss_pred CChHHHHHHHHHHHHCCCeE-EEEeCcchh
Q 040997 15 GHVIPLLEFSQCLAKHGFRV-TFVNTDYYH 43 (128)
Q Consensus 15 GH~~P~l~la~~L~~rG~~V-t~~~t~~~~ 43 (128)
-.....++++..+.+.||+| +++-...-.
T Consensus 15 ~~~~~al~~a~a~~~~g~~v~~vff~~dGV 44 (130)
T 2hy5_A 15 QASDSAYQFAKAALEKGHEIFRVFFYHDGV 44 (130)
T ss_dssp THHHHHHHHHHHHHHTTCEEEEEEECGGGG
T ss_pred HHHHHHHHHHHHHHhcCCeeCEEEEechHH
Confidence 44578899999999999999 887765443
No 121
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=51.05 E-value=55 Score=22.19 Aligned_cols=37 Identities=19% Similarity=0.412 Sum_probs=30.0
Q ss_pred CeEEEEc--CCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 4 PHVLVMP--GPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 4 ~hvl~~p--~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
.+++++. -++.|=-.=...||..|+.+|.+|-++=..
T Consensus 82 ~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D 120 (271)
T 3bfv_A 82 VQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGD 120 (271)
T ss_dssp CCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4565554 467799999999999999999999888655
No 122
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=51.03 E-value=28 Score=23.23 Aligned_cols=35 Identities=17% Similarity=0.243 Sum_probs=23.2
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEe
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~ 38 (128)
|.+.++++|.-.+ |-+ =..++++|+++|++|.+..
T Consensus 1 M~~~k~vlVTGas-~gI--G~aia~~l~~~G~~vv~~~ 35 (258)
T 3oid_A 1 MEQNKCALVTGSS-RGV--GKAAAIRLAENGYNIVINY 35 (258)
T ss_dssp --CCCEEEESSCS-SHH--HHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEecCC-chH--HHHHHHHHHHCCCEEEEEc
Confidence 5555677777443 323 2578999999999998863
No 123
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=50.88 E-value=13 Score=24.18 Aligned_cols=35 Identities=23% Similarity=0.202 Sum_probs=23.9
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
.++|++.- +.|-+- ..++++|+++|++|+.+.-..
T Consensus 21 ~~~ilVtG--atG~iG--~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 21 GMRVLVVG--ANGKVA--RYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEESSG
T ss_pred CCeEEEEC--CCChHH--HHHHHHHHhCCCeEEEEECCh
Confidence 44566554 334332 478899999999999987543
No 124
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=50.75 E-value=53 Score=21.98 Aligned_cols=32 Identities=19% Similarity=0.335 Sum_probs=22.2
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
++++|.-.+.| + =..+|++|+++|++|.++.-
T Consensus 11 k~~lVTGas~g-I--G~a~a~~l~~~G~~V~~~~r 42 (281)
T 3s55_A 11 KTALITGGARG-M--GRSHAVALAEAGADIAICDR 42 (281)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCCCch-H--HHHHHHHHHHCCCeEEEEeC
Confidence 45666644432 2 25789999999999988754
No 125
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=50.75 E-value=14 Score=25.31 Aligned_cols=34 Identities=24% Similarity=0.414 Sum_probs=26.4
Q ss_pred CeEEEEcCCCc--CChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 4 PHVLVMPGPAQ--GHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 4 ~hvl~~p~p~~--GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
.+|++++.+|- |. -+.+|++|+.+|++|+++...
T Consensus 86 ~~vlVlcG~GNNGGD---Glv~AR~L~~~G~~V~v~~~~ 121 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQ---GISCGRHLANHDVQVILFLPN 121 (259)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECCB
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCeEEEEEec
Confidence 47888886663 33 378999999999999998653
No 126
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=50.46 E-value=23 Score=24.44 Aligned_cols=33 Identities=24% Similarity=0.352 Sum_probs=22.9
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
..+|++.- +.|-+- ..|+++|.++|++|+.+.-
T Consensus 27 ~~~vlVtG--atG~iG--~~l~~~L~~~g~~V~~~~r 59 (343)
T 2b69_A 27 RKRILITG--GAGFVG--SHLTDKLMMDGHEVTVVDN 59 (343)
T ss_dssp CCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEEc--CccHHH--HHHHHHHHHCCCEEEEEeC
Confidence 44666654 344442 4678999999999998764
No 127
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=50.46 E-value=59 Score=22.39 Aligned_cols=38 Identities=18% Similarity=0.434 Sum_probs=30.1
Q ss_pred CeEEEEc--CCCcCChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 4 PHVLVMP--GPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 4 ~hvl~~p--~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
.+++++. -++.|=-.=...||..|+.+|.+|-++-...
T Consensus 104 ~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 143 (299)
T 3cio_A 104 NNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADL 143 (299)
T ss_dssp CCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 3555554 3677999999999999999999998886554
No 128
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A*
Probab=50.28 E-value=30 Score=23.07 Aligned_cols=36 Identities=11% Similarity=0.287 Sum_probs=26.3
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHC----CCeEEEEeCcc
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKH----GFRVTFVNTDY 41 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~r----G~~Vt~~~t~~ 41 (128)
.+++++. .|.| +.|++.+.+.|..+ +.+|+++-...
T Consensus 137 ~~~vlia-gGtG-iaP~~~~l~~l~~~~~~~~~~v~l~~~~r 176 (270)
T 2cnd_A 137 RRLAMIC-GGSG-ITPMYQIIQAVLRDQPEDHTEMHLVYANR 176 (270)
T ss_dssp SEEEEEE-EGGG-HHHHHHHHHHHHHTTTTCCCEEEEEEEES
T ss_pred CEEEEEe-cccc-HHHHHHHHHHHHhcCCCCCcEEEEEEEcC
Confidence 3566665 4555 89999999999875 57888875543
No 129
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=50.06 E-value=46 Score=21.03 Aligned_cols=48 Identities=8% Similarity=0.042 Sum_probs=35.5
Q ss_pred CCCCeEEEEcCCCc-CChHHHHHHHHHHHHCCCeEEEEeCcchhhhhhh
Q 040997 1 MSSPHVLVMPGPAQ-GHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVE 48 (128)
Q Consensus 1 m~~~hvl~~p~p~~-GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~~~ 48 (128)
|++.++.++-+-+. --..|.+-+|..-++.|.+||++-|-.-...+.+
T Consensus 2 m~~~kl~II~~sG~~dka~~a~ilA~~AaA~G~eV~iFfTf~Gl~~l~K 50 (160)
T 3pnx_A 2 MENKKMNLLLFSGDYDKALASLIIANAAREMEIEVTIFCAFWGLLLLRD 50 (160)
T ss_dssp CTTCEEEEEECCCCHHHHHHHHHHHHHHHHTTCEEEEEECGGGGGGGBC
T ss_pred CCCCcEEEEEecCCHHHHHHHHHHHHHHHHcCCCEEEEEeehhHHHhcc
Confidence 56667777775554 4567899999999999999999888655544433
No 130
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=50.01 E-value=25 Score=24.32 Aligned_cols=35 Identities=17% Similarity=0.041 Sum_probs=24.8
Q ss_pred CCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 2 SSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 2 ~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
+..+|++.- +.|-+- ..|+++|.++|++|+.+.-.
T Consensus 24 ~~~~vlVtG--atG~iG--~~l~~~L~~~g~~V~~~~r~ 58 (351)
T 3ruf_A 24 SPKTWLITG--VAGFIG--SNLLEKLLKLNQVVIGLDNF 58 (351)
T ss_dssp SCCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred CCCeEEEEC--CCcHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 345666665 445543 47889999999999998653
No 131
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=49.97 E-value=18 Score=25.67 Aligned_cols=33 Identities=21% Similarity=0.345 Sum_probs=23.8
Q ss_pred CCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 2 SSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 2 ~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
.+.+|+++-....| +.+|..|+++|++|+++--
T Consensus 4 ~~~~V~IVGaG~aG-----l~~A~~L~~~G~~v~v~E~ 36 (397)
T 2vou_A 4 TTDRIAVVGGSISG-----LTAALMLRDAGVDVDVYER 36 (397)
T ss_dssp CCSEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCcEEEECCCHHH-----HHHHHHHHhCCCCEEEEec
Confidence 34578877633334 6678889999999999843
No 132
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=49.73 E-value=22 Score=24.52 Aligned_cols=33 Identities=9% Similarity=0.220 Sum_probs=22.9
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
.++|++.- +.|-+- ..|+++|+++|++|+.+.-
T Consensus 20 ~~~vlVTG--asG~iG--~~l~~~L~~~g~~V~~~~r 52 (330)
T 2pzm_A 20 HMRILITG--GAGCLG--SNLIEHWLPQGHEILVIDN 52 (330)
T ss_dssp CCEEEEET--TTSHHH--HHHHHHHGGGTCEEEEEEC
T ss_pred CCEEEEEC--CCCHHH--HHHHHHHHHCCCEEEEEEC
Confidence 34565554 444443 5688999999999998765
No 133
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=49.61 E-value=12 Score=22.10 Aligned_cols=32 Identities=19% Similarity=0.158 Sum_probs=22.9
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
.+|+++-. |.+- ..+++.|..+|++|+++...
T Consensus 7 ~~v~I~G~---G~iG--~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGL---GRFG--GSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CSEEEECC---SHHH--HHHHHHHHHTTCCCEEEESC
T ss_pred CcEEEECC---CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 46777763 4443 45789999999999887654
No 134
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=49.41 E-value=15 Score=23.59 Aligned_cols=32 Identities=22% Similarity=0.219 Sum_probs=22.2
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
+|++.- +.|-+- ..++++|+++|++|+.+.-.
T Consensus 2 kilVtG--atG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 2 KIAVLG--ATGRAG--SAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp EEEEET--TTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred EEEEEc--CCCHHH--HHHHHHHHHCCCEEEEEEec
Confidence 355444 344443 57889999999999988654
No 135
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=49.30 E-value=17 Score=23.61 Aligned_cols=36 Identities=14% Similarity=0.084 Sum_probs=29.4
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
+|.+..-+|.|=-.=...||..|+++|.+|-++=..
T Consensus 2 kI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D 37 (254)
T 3kjh_A 2 KLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGD 37 (254)
T ss_dssp EEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEEC
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 467766666788899999999999999999887544
No 136
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=48.92 E-value=71 Score=22.88 Aligned_cols=29 Identities=21% Similarity=0.132 Sum_probs=19.1
Q ss_pred CChHHHHHHHHHHHHCCCeEEEEeCcchhh
Q 040997 15 GHVIPLLEFSQCLAKHGFRVTFVNTDYYHK 44 (128)
Q Consensus 15 GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~ 44 (128)
--+.=|-.|.++|.++ ++..++.|....+
T Consensus 20 pe~~k~~p~~~~l~~~-~~~~~~~tgqh~~ 48 (385)
T 4hwg_A 20 PELIKLCCVISEFDKH-TKHILVHTGQNYA 48 (385)
T ss_dssp HHHHHHHHHHHHHHHH-SEEEEEECSCHHH
T ss_pred HhHHHHHHHHHHHHhc-CCEEEEEeCCCCC
Confidence 3344455566667666 8988888876654
No 137
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=48.77 E-value=24 Score=23.85 Aligned_cols=36 Identities=14% Similarity=0.153 Sum_probs=24.2
Q ss_pred CC-CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 1 MS-SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 1 m~-~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
|. .++|++.- +.|.+- ..++++|.++|++|+.++-.
T Consensus 1 M~~~~~ilVtG--atG~iG--~~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 1 MDKKSRVLIVG--GTGYIG--KRIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp -CCCCCEEEES--TTSTTH--HHHHHHHHHTTCCEEEECCS
T ss_pred CCCCCEEEEEc--CCcHHH--HHHHHHHHhCCCcEEEEECC
Confidence 54 45677665 344442 46788999999999987654
No 138
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=48.70 E-value=29 Score=25.46 Aligned_cols=32 Identities=31% Similarity=0.267 Sum_probs=24.9
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
..+|+++-....| +..|+.|+++|++||..=.
T Consensus 9 ~k~v~viG~G~sG-----~s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 9 NKKVLVLGLARSG-----EAAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp TCEEEEECCTTTH-----HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEEeeCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 4589998875555 3469999999999999754
No 139
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=48.65 E-value=25 Score=23.76 Aligned_cols=36 Identities=14% Similarity=0.232 Sum_probs=23.8
Q ss_pred CC-CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 1 MS-SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 1 m~-~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
|. ..+|++.- +.|.+- ..++++|.++|++|+.++-.
T Consensus 1 M~~~~~ilVtG--atG~iG--~~l~~~L~~~g~~V~~l~R~ 37 (308)
T 1qyc_A 1 MGSRSRILLIG--ATGYIG--RHVAKASLDLGHPTFLLVRE 37 (308)
T ss_dssp -CCCCCEEEES--TTSTTH--HHHHHHHHHTTCCEEEECCC
T ss_pred CCCCCEEEEEc--CCcHHH--HHHHHHHHhCCCCEEEEECC
Confidence 54 44676665 334442 36789999999999887654
No 140
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=48.28 E-value=20 Score=25.00 Aligned_cols=41 Identities=20% Similarity=0.250 Sum_probs=26.4
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchhhhhhh
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVE 48 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~~~ 48 (128)
.++|.++-..+.| ..+|..|++.|++|+++..+...+.+..
T Consensus 19 ~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~~~~~~~~i~~ 59 (318)
T 3hwr_A 19 GMKVAIMGAGAVG-----CYYGGMLARAGHEVILIARPQHVQAIEA 59 (318)
T ss_dssp -CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECCHHHHHHHHH
T ss_pred CCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcHhHHHHHHh
Confidence 3467777544445 3478899999999999944334444433
No 141
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=48.15 E-value=16 Score=25.75 Aligned_cols=34 Identities=24% Similarity=0.414 Sum_probs=26.7
Q ss_pred CeEEEEcCCCc--CChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 4 PHVLVMPGPAQ--GHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 4 ~hvl~~p~p~~--GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
.+|++++.+|- |. -+.+|++|+.+|++|+++...
T Consensus 133 ~~vlVlcG~GNNGGD---Glv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQ---GISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECCC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCcEEEEEec
Confidence 47899887663 33 378999999999999998653
No 142
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=48.13 E-value=31 Score=25.69 Aligned_cols=39 Identities=18% Similarity=0.401 Sum_probs=33.3
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchh
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYH 43 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~ 43 (128)
-|+++-.+|.|=-.-...||..|+.+|.+|.++....+.
T Consensus 102 vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R 140 (443)
T 3dm5_A 102 ILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWR 140 (443)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSS
T ss_pred EEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 456666788899999999999999999999999877654
No 143
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=48.12 E-value=49 Score=20.80 Aligned_cols=40 Identities=8% Similarity=0.157 Sum_probs=28.9
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
|+..+|+++-+++.. ..-+......|...|++|++++...
T Consensus 7 ~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 7 LTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp CTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 445689998876654 3455566677888899999988753
No 144
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=48.04 E-value=23 Score=22.72 Aligned_cols=36 Identities=25% Similarity=0.313 Sum_probs=24.0
Q ss_pred CCC-CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 1 MSS-PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 1 m~~-~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
|.+ ++|++.- +.|-+- ..++++|.++|++|+.+.-.
T Consensus 1 M~~m~~ilItG--atG~iG--~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 1 MEKVKKIVLIG--ASGFVG--SALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp --CCCEEEEET--CCHHHH--HHHHHHHHTTTCEEEEECSC
T ss_pred CCCCCEEEEEc--CCchHH--HHHHHHHHHCCCEEEEEEcC
Confidence 554 4666654 445443 47889999999999988654
No 145
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=48.00 E-value=21 Score=25.01 Aligned_cols=36 Identities=17% Similarity=0.296 Sum_probs=24.5
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHC-CCeEEEEeCc
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKH-GFRVTFVNTD 40 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~r-G~~Vt~~~t~ 40 (128)
|..++|++.- +.|-+- ..|+++|.++ |++|+.+.-.
T Consensus 22 m~~~~vlVtG--atG~iG--~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 22 MKAKKVLILG--VNGFIG--HHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp -CCCEEEEES--CSSHHH--HHHHHHHHHHSSCEEEEEESC
T ss_pred cCCCEEEEEC--CCChHH--HHHHHHHHhCCCCEEEEEeCC
Confidence 3445677665 445443 4688899988 9999998754
No 146
>2ts1_A Tyrosyl-tRNA synthetase; ligase (synthetase); 2.30A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 3ts1_A* 1tyd_E* 1tya_E* 1tyc_A 1tyb_E* 4ts1_A* 1jh3_A
Probab=47.95 E-value=23 Score=26.14 Aligned_cols=26 Identities=19% Similarity=0.347 Sum_probs=20.9
Q ss_pred cCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 14 QGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 14 ~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
.||+.|+..+ ++|+..||++.++...
T Consensus 46 lGh~v~l~~l-~~lQ~~G~~~i~lIgd 71 (419)
T 2ts1_A 46 IGHLATILTM-RRFQQAGHRPIALVGG 71 (419)
T ss_dssp GGGHHHHHHH-HHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHH-HHHHHCCCcEEEEEcC
Confidence 3999986655 6889999999998754
No 147
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=47.55 E-value=37 Score=23.49 Aligned_cols=42 Identities=19% Similarity=0.163 Sum_probs=28.6
Q ss_pred CCCCeEEEEcCCCcCChH-HHHHHHHHHHHCCCeEEEEeCcch
Q 040997 1 MSSPHVLVMPGPAQGHVI-PLLEFSQCLAKHGFRVTFVNTDYY 42 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~-P~l~la~~L~~rG~~Vt~~~t~~~ 42 (128)
|++..|++-|..+.|... -.-++.+.|..+|.++++..|...
T Consensus 8 m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~ 50 (304)
T 3s40_A 8 FEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQ 50 (304)
T ss_dssp CSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCST
T ss_pred CCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCc
Confidence 334456666777777643 334677788889999999877643
No 148
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=47.55 E-value=17 Score=25.07 Aligned_cols=34 Identities=32% Similarity=0.515 Sum_probs=26.5
Q ss_pred CeEEEEcCCCc--CChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 4 PHVLVMPGPAQ--GHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 4 ~hvl~~p~p~~--GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
.+|++++-+|- |. -+.+|+.|+.+|++|+++...
T Consensus 80 ~~VlVlcG~GNNGGD---Glv~AR~L~~~G~~V~V~~~~ 115 (265)
T 2o8n_A 80 PTVLVICGPGNNGGD---GLVCARHLKLFGYQPTIYYPK 115 (265)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECCS
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCcEEEEEeC
Confidence 47888886663 33 378999999999999998653
No 149
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=47.01 E-value=64 Score=21.78 Aligned_cols=33 Identities=21% Similarity=0.437 Sum_probs=22.3
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.-.+.| + =..+|++|+++|++|.++.-.
T Consensus 10 k~vlVTGas~G-I--G~aia~~l~~~G~~V~~~~r~ 42 (285)
T 3sc4_A 10 KTMFISGGSRG-I--GLAIAKRVAADGANVALVAKS 42 (285)
T ss_dssp CEEEEESCSSH-H--HHHHHHHHHTTTCEEEEEESC
T ss_pred CEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEECC
Confidence 45566644432 2 257899999999998887544
No 150
>1y42_X Tyrosyl-tRNA synthetase, mitochondrial; CYT-18, tRNA ligase, group I intron; HET: TYR; 1.95A {Neurospora crassa} PDB: 2rkj_A
Probab=47.00 E-value=17 Score=26.59 Aligned_cols=26 Identities=19% Similarity=0.450 Sum_probs=20.6
Q ss_pred cCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 14 QGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 14 ~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
.||+.|+..+ ++|+..||++.++...
T Consensus 80 lGhlv~l~~l-~~lQ~~G~~~~~lIgD 105 (392)
T 1y42_X 80 VGHLLPLMPL-FWMYLEGYKAFTLIGG 105 (392)
T ss_dssp GGGHHHHHHH-HHHHHHTCEEEEEECT
T ss_pred HHHHHHHHHH-HHHHHcCCcEEEEEcC
Confidence 3999987665 5888889999998654
No 151
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=46.80 E-value=63 Score=21.69 Aligned_cols=18 Identities=28% Similarity=0.261 Sum_probs=15.2
Q ss_pred HHHHHHHHHCCCeEEEEe
Q 040997 21 LEFSQCLAKHGFRVTFVN 38 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~ 38 (128)
..++++|+++|++|.++.
T Consensus 58 ~~la~~L~~~G~~V~~~~ 75 (285)
T 2c07_A 58 REIAKMLAKSVSHVICIS 75 (285)
T ss_dssp HHHHHHHTTTSSEEEEEE
T ss_pred HHHHHHHHHcCCEEEEEc
Confidence 478899999999998855
No 152
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=46.75 E-value=62 Score=21.62 Aligned_cols=33 Identities=15% Similarity=0.265 Sum_probs=22.4
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.-.+. -+ =..+|++|+++|++|.+....
T Consensus 28 k~vlVTGas~-gI--G~aia~~la~~G~~V~~~~r~ 60 (266)
T 3grp_A 28 RKALVTGATG-GI--GEAIARCFHAQGAIVGLHGTR 60 (266)
T ss_dssp CEEEESSTTS-HH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCc-HH--HHHHHHHHHHCCCEEEEEeCC
Confidence 4566664433 22 257899999999999887543
No 153
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=46.53 E-value=24 Score=24.54 Aligned_cols=35 Identities=20% Similarity=0.032 Sum_probs=23.9
Q ss_pred CCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 2 SSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 2 ~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
+.++|++.- +.|.+- ..|+++|+++|++|+.+.-.
T Consensus 8 ~~~~vlVtG--atG~iG--~~l~~~L~~~g~~V~~~~r~ 42 (357)
T 1rkx_A 8 QGKRVFVTG--HTGFKG--GWLSLWLQTMGATVKGYSLT 42 (357)
T ss_dssp TTCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEEC--CCchHH--HHHHHHHHhCCCeEEEEeCC
Confidence 344566554 455553 46789999999999987643
No 154
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=46.53 E-value=19 Score=22.98 Aligned_cols=38 Identities=21% Similarity=0.237 Sum_probs=26.1
Q ss_pred CCC-CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 1 MSS-PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 1 m~~-~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
|++ +.|+++...+ |...-...++..|+++|++|..+--
T Consensus 1 me~g~~vv~lHG~~-~~~~~~~~~~~~l~~~g~~vi~~D~ 39 (258)
T 3dqz_A 1 MERKHHFVLVHNAY-HGAWIWYKLKPLLESAGHRVTAVEL 39 (258)
T ss_dssp --CCCEEEEECCTT-CCGGGGTTHHHHHHHTTCEEEEECC
T ss_pred CCCCCcEEEECCCC-CccccHHHHHHHHHhCCCEEEEecC
Confidence 555 5677777444 4444467889999999999888753
No 155
>3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ...
Probab=46.51 E-value=24 Score=23.07 Aligned_cols=38 Identities=18% Similarity=0.254 Sum_probs=25.6
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
|.++.||++-..+.++. -.-.+...|+++|++|..+--
T Consensus 1 ~~~~~vvllHG~~~~~~-~w~~~~~~L~~~g~~via~Dl 38 (257)
T 3c6x_A 1 MAFAHFVLIHTICHGAW-IWHKLKPLLEALGHKVTALDL 38 (257)
T ss_dssp -CCCEEEEECCTTCCGG-GGTTHHHHHHHTTCEEEEECC
T ss_pred CCCCcEEEEcCCccCcC-CHHHHHHHHHhCCCEEEEeCC
Confidence 67778999885554332 134577889899999877643
No 156
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=46.35 E-value=60 Score=21.34 Aligned_cols=20 Identities=25% Similarity=0.370 Sum_probs=16.4
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|.++.-.
T Consensus 18 ~~ia~~l~~~G~~V~~~~r~ 37 (255)
T 2q2v_A 18 LGIAQVLARAGANIVLNGFG 37 (255)
T ss_dssp HHHHHHHHHTTCEEEEECSS
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999886543
No 157
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=46.26 E-value=34 Score=22.39 Aligned_cols=36 Identities=25% Similarity=0.245 Sum_probs=26.1
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
+.|++++.. .|+..-...+++.|+.+|++|..+--+
T Consensus 47 p~vv~~hG~-~~~~~~~~~~~~~l~~~g~~v~~~d~~ 82 (315)
T 4f0j_A 47 RTILLMHGK-NFCAGTWERTIDVLADAGYRVIAVDQV 82 (315)
T ss_dssp CEEEEECCT-TCCGGGGHHHHHHHHHTTCEEEEECCT
T ss_pred CeEEEEcCC-CCcchHHHHHHHHHHHCCCeEEEeecC
Confidence 457777643 355556788999999999998887544
No 158
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=46.21 E-value=14 Score=25.67 Aligned_cols=17 Identities=18% Similarity=0.286 Sum_probs=15.1
Q ss_pred HHHHHHHHHCCCeEEEE
Q 040997 21 LEFSQCLAKHGFRVTFV 37 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~ 37 (128)
+.+|..|+++|++|+++
T Consensus 17 l~~A~~La~~G~~V~v~ 33 (397)
T 3oz2_A 17 STAARYAAKYGLKTLMI 33 (397)
T ss_dssp HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHCCCcEEEE
Confidence 56788999999999998
No 159
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=45.69 E-value=64 Score=21.41 Aligned_cols=41 Identities=27% Similarity=0.344 Sum_probs=27.3
Q ss_pred CCCCeEEEEcCCCcC-----------ChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 1 MSSPHVLVMPGPAQG-----------HVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 1 m~~~hvl~~p~p~~G-----------H~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
|...+|+++-....+ .+.=+......|.+.|++|++++...
T Consensus 1 m~m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g 52 (243)
T 1rw7_A 1 MAPKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETG 52 (243)
T ss_dssp -CCCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 444578877753221 33566667778888999999998753
No 160
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=45.66 E-value=41 Score=23.11 Aligned_cols=34 Identities=21% Similarity=0.374 Sum_probs=24.0
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHC-C-CeEEEEeCc
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKH-G-FRVTFVNTD 40 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~r-G-~~Vt~~~t~ 40 (128)
|++++|+++..... .++++.|... | ++|..+...
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCS 37 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESC
T ss_pred CccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCC
Confidence 78889999853322 5789999875 6 777766544
No 161
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=45.59 E-value=53 Score=20.63 Aligned_cols=41 Identities=22% Similarity=0.334 Sum_probs=26.9
Q ss_pred CCCCeEEEEcCCCcCChHHHHH-HHHHHHHCCCeEEEEeCcc
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLE-FSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~-la~~L~~rG~~Vt~~~t~~ 41 (128)
|..++|+++-+...|+..=+.+ +++.|...|++|+++....
T Consensus 3 M~M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 44 (200)
T 2a5l_A 3 MSSPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVPA 44 (200)
T ss_dssp --CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCCC
T ss_pred CCcceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhhh
Confidence 4445788887666787655544 4456666899999876554
No 162
>1zcz_A Bifunctional purine biosynthesis protein PURH; TM1249; HET: PG4; 1.88A {Thermotoga maritima} SCOP: c.24.1.3 c.97.1.4
Probab=45.48 E-value=23 Score=26.55 Aligned_cols=37 Identities=14% Similarity=0.161 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHCCCeEEEEeCcchhhhhhhhhccCCCCCCCceEEecC
Q 040997 19 PLLEFSQCLAKHGFRVTFVNTDYYHKRVVESLQGKNYLEEQIRLVSIP 66 (128)
Q Consensus 19 P~l~la~~L~~rG~~Vt~~~t~~~~~~~~~~~~~~~~~~~~i~~~~~~ 66 (128)
-+++||+.|...|++ +++|....+.+... ++....+.
T Consensus 25 gl~~~A~~L~~~G~e--iisTgGTak~L~~~---------Gi~v~~Vs 61 (464)
T 1zcz_A 25 KYLDILRELHEKGWE--IWASSGTAKFLKSN---------GIEANDVS 61 (464)
T ss_dssp GGHHHHHHHHHTTCE--EEECHHHHHHHHHT---------TCCCEEGG
T ss_pred CHHHHHHHHHHCCCE--EEECchHHHHHHHC---------CCceEEHH
Confidence 378999999999987 78888888776663 55555554
No 163
>3noh_A Putative peptide binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Ruminococcus gnavus}
Probab=45.46 E-value=18 Score=22.09 Aligned_cols=18 Identities=17% Similarity=0.161 Sum_probs=14.0
Q ss_pred HHHHHHHHHCCCeEEEEe
Q 040997 21 LEFSQCLAKHGFRVTFVN 38 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~ 38 (128)
-.||++|...|.+|++--
T Consensus 78 ~~Lc~RL~~AG~~V~lk~ 95 (139)
T 3noh_A 78 DSLCERLNDAGADVQIKQ 95 (139)
T ss_dssp HHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHhcCCCceecc
Confidence 357777888899999843
No 164
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=45.45 E-value=38 Score=23.18 Aligned_cols=32 Identities=22% Similarity=0.308 Sum_probs=21.9
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
++|++.- +.|-+- ..++++|+++|++|+.+.-
T Consensus 6 ~~vlVTG--atG~iG--~~l~~~L~~~G~~V~~~~r 37 (341)
T 3enk_A 6 GTILVTG--GAGYIG--SHTAVELLAHGYDVVIADN 37 (341)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHHTTCEEEEECC
T ss_pred cEEEEec--CCcHHH--HHHHHHHHHCCCcEEEEec
Confidence 3555443 444443 4789999999999998754
No 165
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=45.38 E-value=17 Score=25.05 Aligned_cols=32 Identities=22% Similarity=0.336 Sum_probs=23.1
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
..|++|-....| +..|..|+++|++|+++--.
T Consensus 5 ~dvvIIG~G~~G-----l~~A~~La~~G~~V~vlE~~ 36 (369)
T 3dme_A 5 IDCIVIGAGVVG-----LAIARALAAGGHEVLVAEAA 36 (369)
T ss_dssp EEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CCEEEECCCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 467777644334 66788889999999998543
No 166
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=44.97 E-value=18 Score=20.65 Aligned_cols=30 Identities=20% Similarity=0.162 Sum_probs=18.9
Q ss_pred HHHHHHHhcCCCCCccEEEeCCCccc--HHHHHHh
Q 040997 94 EKLIEEINSREDEKIDCFIADGNMGW--SLEVAKK 126 (128)
Q Consensus 94 ~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~vA~~ 126 (128)
++.++.+.+ .+||+||.|..++- +..+.++
T Consensus 36 ~~al~~l~~---~~~dlvllD~~~p~~~g~~~~~~ 67 (122)
T 3gl9_A 36 QIALEKLSE---FTPDLIVLXIMMPVMDGFTVLKK 67 (122)
T ss_dssp HHHHHHHTT---BCCSEEEECSCCSSSCHHHHHHH
T ss_pred HHHHHHHHh---cCCCEEEEeccCCCCcHHHHHHH
Confidence 445555543 57999999987653 4444443
No 167
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=44.68 E-value=12 Score=25.70 Aligned_cols=35 Identities=26% Similarity=0.458 Sum_probs=24.4
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
|+..+|+++-....| +..|..|+++|++|+++--.
T Consensus 1 m~~~~vvIIG~G~aG-----l~~A~~l~~~g~~v~vie~~ 35 (357)
T 4a9w_A 1 MDSVDVVVIGGGQSG-----LSAGYFLRRSGLSYVILDAE 35 (357)
T ss_dssp CEEEEEEEECCSHHH-----HHHHHHHHHSSCCEEEECCS
T ss_pred CCcCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 555567777633333 56778888999999998654
No 168
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=44.61 E-value=22 Score=25.27 Aligned_cols=32 Identities=22% Similarity=0.446 Sum_probs=23.0
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
..+|+++-....| +.+|..|+++|++|+++=-
T Consensus 26 ~~dV~IVGaG~aG-----l~~A~~L~~~G~~v~v~E~ 57 (398)
T 2xdo_A 26 DKNVAIIGGGPVG-----LTMAKLLQQNGIDVSVYER 57 (398)
T ss_dssp TCEEEEECCSHHH-----HHHHHHHHTTTCEEEEEEC
T ss_pred CCCEEEECCCHHH-----HHHHHHHHHCCCCEEEEeC
Confidence 3467777644334 5678889999999999853
No 169
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=44.49 E-value=21 Score=25.31 Aligned_cols=25 Identities=16% Similarity=0.161 Sum_probs=21.4
Q ss_pred hHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 17 VIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 17 ~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
.-+|.+|-+.|.++|++|.+++...
T Consensus 145 ~~~~~~l~~~l~~~G~~v~ivSas~ 169 (327)
T 4as2_A 145 FSGQRELYNKLMENGIEVYVISAAH 169 (327)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 3579999999999999998887653
No 170
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=44.27 E-value=43 Score=21.36 Aligned_cols=36 Identities=11% Similarity=0.137 Sum_probs=25.7
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
++.|++++..+ |...-...+++.|+.+|++|..+--
T Consensus 12 ~~~vvllHG~~-~~~~~~~~~~~~l~~~g~~v~~~D~ 47 (267)
T 3sty_A 12 KKHFVLVHAAF-HGAWCWYKIVALMRSSGHNVTALDL 47 (267)
T ss_dssp CCEEEEECCTT-CCGGGGHHHHHHHHHTTCEEEEECC
T ss_pred CCeEEEECCCC-CCcchHHHHHHHHHhcCCeEEEecc
Confidence 45677777443 4555566888999999999887753
No 171
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=44.09 E-value=33 Score=19.90 Aligned_cols=20 Identities=30% Similarity=0.312 Sum_probs=13.0
Q ss_pred CCccEEEeCCCcc--cHHHHHH
Q 040997 106 EKIDCFIADGNMG--WSLEVAK 125 (128)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~ 125 (128)
.+||+||.|..++ -+.++.+
T Consensus 53 ~~~dlvllD~~lp~~~g~~~~~ 74 (140)
T 3c97_A 53 RQFDVIIMDIQMPVMDGLEAVS 74 (140)
T ss_dssp SCCSEEEECTTCCSSCHHHHHH
T ss_pred CCCCEEEEeCCCCCCcHHHHHH
Confidence 4689999998664 2444444
No 172
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=44.05 E-value=20 Score=22.48 Aligned_cols=34 Identities=15% Similarity=0.069 Sum_probs=23.7
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHC-CCeEEEEeCcc
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKH-GFRVTFVNTDY 41 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~r-G~~Vt~~~t~~ 41 (128)
..||+++- .|.+- ..+++.|.++ |++|+++....
T Consensus 39 ~~~v~IiG---~G~~G--~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILG---MGRIG--TGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEEC---CSHHH--HHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEEC---CCHHH--HHHHHHHHhccCCeEEEEECCH
Confidence 34788774 34332 4568889998 99999886653
No 173
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=44.04 E-value=38 Score=22.76 Aligned_cols=38 Identities=21% Similarity=0.261 Sum_probs=19.4
Q ss_pred CCCCeEEEEc-CCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 1 MSSPHVLVMP-GPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 1 m~~~hvl~~p-~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
|.+.+|+++. -|--= ..-+-..-.+++++|++|++++.
T Consensus 1 ~~~~~vL~v~aHPDDe-~l~~Ggtia~~~~~G~~V~vv~l 39 (242)
T 2ixd_A 1 MSGLHILAFGAHADDV-EIGMAGTIAKYTKQGYEVGICDL 39 (242)
T ss_dssp -CCCSEEEEESSTTHH-HHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCccEEEEEeCCChH-HHhHHHHHHHHHHCCCeEEEEEE
Confidence 5555665554 22110 12223333566678999888643
No 174
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=43.75 E-value=18 Score=24.94 Aligned_cols=46 Identities=7% Similarity=0.051 Sum_probs=37.0
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHH--------HHHC-CCeEEEEeCcchhhhhhh
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQC--------LAKH-GFRVTFVNTDYYHKRVVE 48 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~--------L~~r-G~~Vt~~~t~~~~~~~~~ 48 (128)
+.+|++.+.++-+|-....-++.. |..+ |++|.++-.......+..
T Consensus 120 ~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~iv~ 174 (262)
T 1xrs_B 120 KIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDFIK 174 (262)
T ss_dssp CEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHHHH
T ss_pred CCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHHHH
Confidence 457888888999999999888877 8898 999999877655554444
No 175
>1jil_A Tyrrs, tyrosyl-tRNA synthetase; truncation, based inhibitor design, ligase; HET: 485; 2.20A {Staphylococcus aureus} SCOP: c.26.1.1 PDB: 1jij_A* 1jii_A* 1jik_A*
Probab=43.69 E-value=22 Score=26.24 Aligned_cols=26 Identities=27% Similarity=0.563 Sum_probs=20.7
Q ss_pred CChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 15 GHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 15 GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
||+.|+..+ ++|+..||++.++....
T Consensus 49 Gh~v~l~~~-~~lQ~~G~~~~~lIgd~ 74 (420)
T 1jil_A 49 GHLLPFLTL-RRFQEHGHRPIVLIGGG 74 (420)
T ss_dssp HHHHHHHHH-HHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHH-HHHHHCCCcEEEEEcCc
Confidence 999986555 68899999999987543
No 176
>2g36_A Tryptophanyl-tRNA synthetase; TM0492, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI, ligase; HET: TRP; 2.50A {Thermotoga maritima}
Probab=43.63 E-value=17 Score=26.03 Aligned_cols=26 Identities=27% Similarity=0.347 Sum_probs=22.8
Q ss_pred CChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 15 GHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 15 GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
||+.|++.-.+.|+..|+++.++...
T Consensus 28 Gn~~g~l~~~~~lQ~~G~~~~~~IaD 53 (340)
T 2g36_A 28 GHLVGALENWVKLQEEGNECFYFVAD 53 (340)
T ss_dssp HHHHTHHHHHHHHHHTTCEEEEEECH
T ss_pred HhHHHHHHHHHHHHHCCCCEEEEEec
Confidence 88888888888899999999998765
No 177
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=43.53 E-value=40 Score=21.47 Aligned_cols=35 Identities=29% Similarity=0.369 Sum_probs=25.1
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
+.|++++.. .|+-.-+..+++.|+.+|++|..+--
T Consensus 27 ~~vv~~hG~-~~~~~~~~~~~~~l~~~G~~v~~~d~ 61 (286)
T 3qit_A 27 PVVLCIHGI-LEQGLAWQEVALPLAAQGYRVVAPDL 61 (286)
T ss_dssp CEEEEECCT-TCCGGGGHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEECCC-CcccchHHHHHHHhhhcCeEEEEECC
Confidence 456777643 34444567889999999999888743
No 178
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=43.40 E-value=45 Score=23.14 Aligned_cols=32 Identities=16% Similarity=0.326 Sum_probs=23.8
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++|.++-....| ..+|+.|+++|++|+++...
T Consensus 32 ~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 32 RKITFLGTGSMG-----LPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp SEEEEECCTTTH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECccHHH-----HHHHHHHHhCCCeEEEEcCC
Confidence 478888554445 56888999999999987554
No 179
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=43.29 E-value=28 Score=24.10 Aligned_cols=33 Identities=15% Similarity=0.123 Sum_probs=22.7
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
..+|++.- +.|-+- ..|+++|+++|++|+.+.-
T Consensus 27 ~~~vlVtG--atG~iG--~~l~~~L~~~g~~V~~~~r 59 (352)
T 1sb8_A 27 PKVWLITG--VAGFIG--SNLLETLLKLDQKVVGLDN 59 (352)
T ss_dssp CCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEEC
T ss_pred CCeEEEEC--CCcHHH--HHHHHHHHHCCCEEEEEeC
Confidence 34566554 344332 4688999999999998864
No 180
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=43.15 E-value=57 Score=20.48 Aligned_cols=34 Identities=18% Similarity=0.210 Sum_probs=25.9
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
-|+++. ...|+-.-+..+++.|+++|+.|..+-.
T Consensus 34 ~vv~~H-G~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 34 IVIVVQ-EIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEC-CTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred EEEEEc-CcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 345554 4557777889999999999999887754
No 181
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=43.14 E-value=30 Score=20.06 Aligned_cols=29 Identities=31% Similarity=0.339 Sum_probs=23.5
Q ss_pred ChHHHHHHHHHHHHCCCeEEEEeCcchhh
Q 040997 16 HVIPLLEFSQCLAKHGFRVTFVNTDYYHK 44 (128)
Q Consensus 16 H~~P~l~la~~L~~rG~~Vt~~~t~~~~~ 44 (128)
.-|-+-+++++..+||++|.-++++...+
T Consensus 86 dqnrleefsrevrrrgfevrtvtspddfk 114 (134)
T 2l69_A 86 DQNRLEEFSREVRRRGFEVRTVTSPDDFK 114 (134)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSHHHHH
T ss_pred chhHHHHHHHHHHhcCceEEEecChHHHH
Confidence 45778889999999999999988886543
No 182
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=43.13 E-value=28 Score=24.07 Aligned_cols=33 Identities=18% Similarity=0.235 Sum_probs=24.6
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
++|.++-..+.|- .+|..|++.|++|+++.-..
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc
Confidence 4688886555563 36889999999999987755
No 183
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=42.99 E-value=36 Score=18.78 Aligned_cols=13 Identities=31% Similarity=0.238 Sum_probs=9.4
Q ss_pred CCccEEEeCCCcc
Q 040997 106 EKIDCFIADGNMG 118 (128)
Q Consensus 106 ~~~d~vI~D~~~~ 118 (128)
.+||+||.|..++
T Consensus 44 ~~~dlvl~D~~l~ 56 (116)
T 3a10_A 44 GNYDLVILDIEMP 56 (116)
T ss_dssp SCCSEEEECSCCS
T ss_pred CCCCEEEEECCCC
Confidence 4688888887654
No 184
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=42.49 E-value=81 Score=21.69 Aligned_cols=32 Identities=22% Similarity=0.375 Sum_probs=22.0
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
++++|.-.+ |-+ =..+|++|+++|++|.++.-
T Consensus 28 k~vlVTGas-~GI--G~aia~~la~~G~~Vv~~~r 59 (322)
T 3qlj_A 28 RVVIVTGAG-GGI--GRAHALAFAAEGARVVVNDI 59 (322)
T ss_dssp CEEEETTTT-SHH--HHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEECCC-cHH--HHHHHHHHHHCCCEEEEEeC
Confidence 566666433 322 25789999999999988743
No 185
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=42.31 E-value=59 Score=23.00 Aligned_cols=34 Identities=29% Similarity=0.160 Sum_probs=21.8
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
|.+++|+|+- . -+-...+-+.|.++|++|..+.|
T Consensus 20 ~~~mrIvf~G---~--~~fa~~~L~~L~~~~~~i~~Vvt 53 (329)
T 2bw0_A 20 FQSMKIAVIG---Q--SLFGQEVYCHLRKEGHEVVGVFT 53 (329)
T ss_dssp -CCCEEEEEC---C--HHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCEEEEEc---C--cHHHHHHHHHHHHCCCeEEEEEe
Confidence 4567899882 2 12222345778888999887766
No 186
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=42.28 E-value=28 Score=24.86 Aligned_cols=38 Identities=16% Similarity=0.296 Sum_probs=27.6
Q ss_pred CCCCeEEEEcCCCcC--C---hHHHHHHHHHH-HHCCCeEEEEeC
Q 040997 1 MSSPHVLVMPGPAQG--H---VIPLLEFSQCL-AKHGFRVTFVNT 39 (128)
Q Consensus 1 m~~~hvl~~p~p~~G--H---~~P~l~la~~L-~~rG~~Vt~~~t 39 (128)
|.+.+|+++-. |++ | +.....+.+.| .++|++|+.+..
T Consensus 1 m~k~~v~vl~g-G~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~ 44 (377)
T 1ehi_A 1 MTKKRVALIFG-GNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAI 44 (377)
T ss_dssp --CEEEEEEEE-CSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEE
T ss_pred CCCcEEEEEeC-CCCCCcceeHHHHHHHHHHhCcccCcEEEEEEE
Confidence 77778888863 443 3 45678999999 999999998753
No 187
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=42.27 E-value=46 Score=21.98 Aligned_cols=37 Identities=5% Similarity=0.121 Sum_probs=28.4
Q ss_pred CCCeEEEEcC--CCcCChHHHHHHHHHHHHCCCeEEEEe
Q 040997 2 SSPHVLVMPG--PAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (128)
Q Consensus 2 ~~~hvl~~p~--p~~GH~~P~l~la~~L~~rG~~Vt~~~ 38 (128)
++++.+++.. ++.|=-.=.+.|++.|.++|.+|.++-
T Consensus 2 ~~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 2 NAMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp TTCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 3445555553 456888889999999999999999964
No 188
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=41.79 E-value=61 Score=20.80 Aligned_cols=34 Identities=12% Similarity=0.264 Sum_probs=20.5
Q ss_pred EEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 6 VLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 6 vl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
|+++..+...+-.....+++++...|++|.++..
T Consensus 110 iil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~ 143 (192)
T 2x5n_A 110 VAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHI 143 (192)
T ss_dssp EEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred EEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEe
Confidence 3444444444556667777777777777766543
No 189
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=41.62 E-value=50 Score=19.09 Aligned_cols=40 Identities=10% Similarity=0.113 Sum_probs=27.6
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
|+..+|++++..|.|=-.=+-.+-+.+..+|.++.+-..+
T Consensus 1 M~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~ 40 (106)
T 1e2b_A 1 MEKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFP 40 (106)
T ss_dssp CCCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEEC
T ss_pred CCCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 6777899999777644433335556667899988775444
No 190
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=41.57 E-value=20 Score=24.41 Aligned_cols=34 Identities=18% Similarity=0.198 Sum_probs=22.7
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEe
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~ 38 (128)
|..++|++.- +.|.+- -+|+++|.++|++|+.+.
T Consensus 1 M~~~~ilVtG--atG~iG--~~l~~~L~~~g~~v~~~~ 34 (321)
T 1e6u_A 1 MAKQRVFIAG--HRGMVG--SAIRRQLEQRGDVELVLR 34 (321)
T ss_dssp -CCEEEEEET--TTSHHH--HHHHHHHTTCTTEEEECC
T ss_pred CCCCEEEEEC--CCcHHH--HHHHHHHHhCCCeEEEEe
Confidence 5566776665 445443 357888999999988764
No 191
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=41.56 E-value=22 Score=20.10 Aligned_cols=23 Identities=13% Similarity=0.108 Sum_probs=15.6
Q ss_pred HHHHHHHhcCCCCCccEEEeCCCccc
Q 040997 94 EKLIEEINSREDEKIDCFIADGNMGW 119 (128)
Q Consensus 94 ~~ll~~l~~~~~~~~d~vI~D~~~~~ 119 (128)
++.++.+.+ .+||+||.|..++-
T Consensus 36 ~~al~~~~~---~~~dlii~D~~~p~ 58 (120)
T 3f6p_A 36 NEAVEMVEE---LQPDLILLDIMLPN 58 (120)
T ss_dssp HHHHHHHHT---TCCSEEEEETTSTT
T ss_pred HHHHHHHhh---CCCCEEEEeCCCCC
Confidence 444555543 57999999987753
No 192
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=41.48 E-value=36 Score=23.89 Aligned_cols=34 Identities=18% Similarity=0.121 Sum_probs=23.3
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
..+|++.- +.|.+- -.|+++|+++|++|+.+.-.
T Consensus 5 ~~~ilVtG--atG~iG--~~l~~~L~~~g~~V~~~~R~ 38 (352)
T 1xgk_A 5 KKTIAVVG--ATGRQG--ASLIRVAAAVGHHVRAQVHS 38 (352)
T ss_dssp CCCEEEES--TTSHHH--HHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEEC--CCCHHH--HHHHHHHHhCCCEEEEEECC
Confidence 45666665 344443 35788999999999987644
No 193
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=41.33 E-value=25 Score=22.78 Aligned_cols=32 Identities=19% Similarity=0.309 Sum_probs=21.6
Q ss_pred EEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 6 VLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 6 vl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
.+++. .+.|-+- ..++++|+++|++|+++.-.
T Consensus 7 ~vlVt-GasggiG--~~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 7 AVLIT-GASRGIG--EATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp EEEES-STTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred EEEEE-CCCcHHH--HHHHHHHHHCCCEEEEEECC
Confidence 44444 3334332 57899999999999887654
No 194
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=41.33 E-value=23 Score=23.08 Aligned_cols=19 Identities=21% Similarity=0.324 Sum_probs=15.9
Q ss_pred HHHHHHHHHCCCeEEEEeC
Q 040997 21 LEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t 39 (128)
.+++++|+++|++|+.+.-
T Consensus 15 ~~l~~~L~~~g~~V~~~~r 33 (255)
T 2dkn_A 15 AALKELLARAGHTVIGIDR 33 (255)
T ss_dssp HHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHhCCCEEEEEeC
Confidence 4678999999999998754
No 195
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=41.29 E-value=81 Score=21.37 Aligned_cols=33 Identities=12% Similarity=0.078 Sum_probs=22.1
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.-.+. -+ =..++++|+++|++|.+....
T Consensus 50 k~vlVTGas~-GI--G~aia~~la~~G~~V~~~~~~ 82 (294)
T 3r3s_A 50 RKALVTGGDS-GI--GRAAAIAYAREGADVAINYLP 82 (294)
T ss_dssp CEEEEETTTS-HH--HHHHHHHHHHTTCEEEEECCG
T ss_pred CEEEEeCCCc-HH--HHHHHHHHHHCCCEEEEEeCC
Confidence 4555553333 22 257899999999999886544
No 196
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=41.25 E-value=26 Score=23.16 Aligned_cols=35 Identities=6% Similarity=0.084 Sum_probs=25.6
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCC--CeEEEEeCc
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHG--FRVTFVNTD 40 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG--~~Vt~~~t~ 40 (128)
.+++++. .|.| +.|++.+.+.|..+| .+|+++-..
T Consensus 118 ~~~vlia-gGtG-iaP~~~~l~~l~~~~~~~~v~l~~~~ 154 (250)
T 1tvc_A 118 APRYFVA-GGTG-LAPVVSMVRQMQEWTAPNETRIYFGV 154 (250)
T ss_dssp SCEEEEE-ESST-THHHHHHHHHHHHHTCCSCEEEEEEC
T ss_pred ceEEEEE-eccC-HHHHHHHHHHHHhcCCCceEEEEEEe
Confidence 3566665 3445 899999999998876 678886543
No 197
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=41.19 E-value=48 Score=22.28 Aligned_cols=37 Identities=14% Similarity=0.204 Sum_probs=24.4
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
|-..++++|...+. -+ =..+|++|+++|++|.++.-.
T Consensus 1 Ml~~k~~lVTGas~-GI--G~aia~~la~~G~~V~~~~r~ 37 (264)
T 3tfo_A 1 MVMDKVILITGASG-GI--GEGIARELGVAGAKILLGARR 37 (264)
T ss_dssp CCTTCEEEESSTTS-HH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCEEEEeCCcc-HH--HHHHHHHHHHCCCEEEEEECC
Confidence 44445666664443 22 257899999999998887543
No 198
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=41.18 E-value=53 Score=21.85 Aligned_cols=36 Identities=22% Similarity=0.353 Sum_probs=23.7
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
|.+.++++|...+. -+ =..+|++|+++|++|.++..
T Consensus 23 m~~~k~vlITGas~-gI--G~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 23 MSDTPVVLVTGGSR-GI--GAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp -CCSCEEEETTTTS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCEEEEECCCc-hH--HHHHHHHHHHCCCEEEEEcC
Confidence 33445677764433 22 25889999999999987643
No 199
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=41.05 E-value=26 Score=23.71 Aligned_cols=34 Identities=18% Similarity=0.263 Sum_probs=23.8
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
..+|++.- +.|.+- ..|+++|.++|++|+.+.-.
T Consensus 7 ~~~vlVtG--atG~iG--~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 7 KHRILITG--GAGFIG--GHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp CCEEEEET--TTSHHH--HHHHHHHHHTTCCEEEECCC
T ss_pred CCeEEEEC--CCChHH--HHHHHHHHHCCCEEEEEecC
Confidence 34666665 444443 36889999999999988643
No 200
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=40.91 E-value=45 Score=18.79 Aligned_cols=21 Identities=24% Similarity=0.134 Sum_probs=12.7
Q ss_pred CCccEEEeCCCcc--cHHHHHHh
Q 040997 106 EKIDCFIADGNMG--WSLEVAKK 126 (128)
Q Consensus 106 ~~~d~vI~D~~~~--~~~~vA~~ 126 (128)
.+||+||.|..++ -+.++.++
T Consensus 50 ~~~dlvl~D~~l~~~~g~~~~~~ 72 (129)
T 1p6q_A 50 NPHHLVISDFNMPKMDGLGLLQA 72 (129)
T ss_dssp SCCSEEEECSSSCSSCHHHHHHH
T ss_pred CCCCEEEEeCCCCCCCHHHHHHH
Confidence 4678888887654 24444443
No 201
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=40.87 E-value=18 Score=23.19 Aligned_cols=32 Identities=9% Similarity=0.239 Sum_probs=22.2
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
+|++.- +.|-+- ..++++|+++|++|+.+.-.
T Consensus 2 ~ilItG--atG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 2 KIFIVG--STGRVG--KSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp EEEEES--TTSHHH--HHHHHHHTTSSCEEEEEESS
T ss_pred eEEEEC--CCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 455554 333333 57899999999999988654
No 202
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=40.51 E-value=22 Score=21.95 Aligned_cols=21 Identities=24% Similarity=0.335 Sum_probs=18.0
Q ss_pred HHHHHHHHHHCCCeEEEEeCc
Q 040997 20 LLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 20 ~l~la~~L~~rG~~Vt~~~t~ 40 (128)
=+++|..|+++|.+||++...
T Consensus 13 Gl~~A~~l~~~g~~v~lie~~ 33 (180)
T 2ywl_A 13 GLSAALFLARAGLKVLVLDGG 33 (180)
T ss_dssp HHHHHHHHHHTTCCEEEEECS
T ss_pred HHHHHHHHHHCCCcEEEEeCC
Confidence 378899999999999999754
No 203
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=40.46 E-value=21 Score=20.77 Aligned_cols=30 Identities=20% Similarity=0.274 Sum_probs=18.3
Q ss_pred HHHHHHHhcCCCCCccEEEeCCCccc--HHHHHHh
Q 040997 94 EKLIEEINSREDEKIDCFIADGNMGW--SLEVAKK 126 (128)
Q Consensus 94 ~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~vA~~ 126 (128)
++.++.+.+ .+||+||.|..++- +.++.++
T Consensus 38 ~~al~~~~~---~~~dlvl~D~~lp~~~g~~~~~~ 69 (136)
T 3t6k_A 38 EEALQQIYK---NLPDALICDVLLPGIDGYTLCKR 69 (136)
T ss_dssp HHHHHHHHH---SCCSEEEEESCCSSSCHHHHHHH
T ss_pred HHHHHHHHh---CCCCEEEEeCCCCCCCHHHHHHH
Confidence 344444443 47999999987753 4444443
No 204
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=40.45 E-value=26 Score=22.96 Aligned_cols=35 Identities=29% Similarity=0.395 Sum_probs=24.6
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
|+...|+++-. |+. =+..|..|+++|.+|+++...
T Consensus 1 M~~~dVvVVGg---G~a--Gl~aA~~la~~g~~v~lie~~ 35 (232)
T 2cul_A 1 MAAYQVLIVGA---GFS--GAETAFWLAQKGVRVGLLTQS 35 (232)
T ss_dssp -CCCSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CCCCCEEEECc---CHH--HHHHHHHHHHCCCCEEEEecC
Confidence 55566777653 322 367888999999999998765
No 205
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=40.27 E-value=33 Score=23.35 Aligned_cols=35 Identities=26% Similarity=0.265 Sum_probs=24.5
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
|+..+|.++- .|.+- ..+|+.|+.+|++|+++...
T Consensus 2 m~~~kV~VIG---aG~mG--~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 2 TGITNVTVLG---TGVLG--SQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp CSCCEEEEEC---CSHHH--HHHHHHHHHTTCEEEEECSS
T ss_pred CCCCEEEEEC---CCHHH--HHHHHHHHhCCCeEEEEeCC
Confidence 3445788884 34433 35788999999999997554
No 206
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=40.27 E-value=24 Score=25.78 Aligned_cols=36 Identities=25% Similarity=0.270 Sum_probs=21.7
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHC--CCeEEEEeCcc
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDY 41 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~r--G~~Vt~~~t~~ 41 (128)
|.+.+|+++-....| +..|..|+++ |++||++--..
T Consensus 1 M~~~~VvIIGaG~aG-----l~aA~~L~~~~~g~~Vtvie~~~ 38 (472)
T 3iwa_A 1 MSLKHVVVIGAVALG-----PKAACRFKRLDPEAHVTMIDQAS 38 (472)
T ss_dssp ---CEEEEECCSSHH-----HHHHHHHHHHCTTSEEEEECCC-
T ss_pred CCCCcEEEECCCHHH-----HHHHHHHHhhCcCCCEEEEECCC
Confidence 666788888743334 3455666666 99999985543
No 207
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=40.19 E-value=44 Score=19.29 Aligned_cols=13 Identities=31% Similarity=0.465 Sum_probs=8.6
Q ss_pred CCccEEEeCCCcc
Q 040997 106 EKIDCFIADGNMG 118 (128)
Q Consensus 106 ~~~d~vI~D~~~~ 118 (128)
.+||+||.|...+
T Consensus 54 ~~~dlvi~d~~l~ 66 (143)
T 2qv0_A 54 NKVDAIFLDINIP 66 (143)
T ss_dssp CCCSEEEECSSCS
T ss_pred CCCCEEEEecCCC
Confidence 3578888876553
No 208
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=39.38 E-value=49 Score=21.62 Aligned_cols=35 Identities=11% Similarity=0.361 Sum_probs=25.4
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHC---CCeEEEEeCc
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKH---GFRVTFVNTD 40 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~r---G~~Vt~~~t~ 40 (128)
.+++++. .|.| +.|++.+.+.|..+ +.+|+++-..
T Consensus 117 ~~~vlia-gG~G-iaP~~~~l~~l~~~~~~~~~v~l~~~~ 154 (243)
T 2eix_A 117 KEMGMIA-GGTG-ITPMLQVARAIIKNPKEKTIINLIFAN 154 (243)
T ss_dssp SEEEEEE-EGGG-HHHHHHHHHHHHTCTTCCCEEEEEEEE
T ss_pred cEEEEEe-cCcc-HHHHHHHHHHHHhCCCCCcEEEEEEEc
Confidence 3566665 3445 89999999999864 5788887543
No 209
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=39.38 E-value=20 Score=25.38 Aligned_cols=36 Identities=8% Similarity=0.119 Sum_probs=26.2
Q ss_pred CCCCeEEEEcCCCcC--C---hHHHHHHHHHHHHCCCeEEEE
Q 040997 1 MSSPHVLVMPGPAQG--H---VIPLLEFSQCLAKHGFRVTFV 37 (128)
Q Consensus 1 m~~~hvl~~p~p~~G--H---~~P~l~la~~L~~rG~~Vt~~ 37 (128)
|++.+|.++- .|.+ | +..-..+.+.|.+.|++|+.+
T Consensus 1 M~kkkv~vl~-GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i 41 (357)
T 4fu0_A 1 MQNKKIAVIF-GGNSTEYEVSLQSASAVFENINTNKFDIIPI 41 (357)
T ss_dssp -CCEEEEEEE-ECSSTTHHHHHHHHHHHHHHSCTTTEEEEEE
T ss_pred CCCCEEEEEE-CCCccchHHHHHHHHHHHHHHhHhCCEEEEE
Confidence 8888998874 3443 4 445667889999999999876
No 210
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=39.30 E-value=43 Score=19.14 Aligned_cols=13 Identities=8% Similarity=-0.044 Sum_probs=8.9
Q ss_pred CCccEEEeCCCcc
Q 040997 106 EKIDCFIADGNMG 118 (128)
Q Consensus 106 ~~~d~vI~D~~~~ 118 (128)
.+||+||.|..++
T Consensus 46 ~~~dlvl~D~~l~ 58 (132)
T 3crn_A 46 EFFNLALFXIKLP 58 (132)
T ss_dssp SCCSEEEECSBCS
T ss_pred CCCCEEEEecCCC
Confidence 3678888887553
No 211
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=39.30 E-value=58 Score=19.07 Aligned_cols=41 Identities=10% Similarity=-0.073 Sum_probs=27.7
Q ss_pred CCCCeEEEEcCCCcCCh--HHHHHHHHHHHHCCCeEEEEeCcch
Q 040997 1 MSSPHVLVMPGPAQGHV--IPLLEFSQCLAKHGFRVTFVNTDYY 42 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~--~P~l~la~~L~~rG~~Vt~~~t~~~ 42 (128)
|++--+ ++.-+..|+- .-.++++..+.+.|++|+++-..+-
T Consensus 1 Mkk~~~-vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~DG 43 (119)
T 2d1p_B 1 MKRIAF-VFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADG 43 (119)
T ss_dssp CCCEEE-EECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECGGG
T ss_pred CcEEEE-EEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEehHH
Confidence 554333 3333444655 7788999999999999998766543
No 212
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=39.24 E-value=26 Score=20.24 Aligned_cols=22 Identities=14% Similarity=0.255 Sum_probs=14.9
Q ss_pred HHHHHHHhcCCCCCccEEEeCCCcc
Q 040997 94 EKLIEEINSREDEKIDCFIADGNMG 118 (128)
Q Consensus 94 ~~ll~~l~~~~~~~~d~vI~D~~~~ 118 (128)
++.++.+.+ .+||+||.|..++
T Consensus 40 ~~a~~~l~~---~~~dlvi~d~~l~ 61 (140)
T 3grc_A 40 AQALEQVAR---RPYAAMTVDLNLP 61 (140)
T ss_dssp HHHHHHHHH---SCCSEEEECSCCS
T ss_pred HHHHHHHHh---CCCCEEEEeCCCC
Confidence 444455544 4799999998664
No 213
>3cmu_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 4.20A {Escherichia coli}
Probab=39.11 E-value=97 Score=27.93 Aligned_cols=45 Identities=11% Similarity=0.162 Sum_probs=38.7
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchhhhhhh
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVE 48 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~~~ 48 (128)
..+++...|+.|...=..+++.+-+.+|.++.|++.+...+.+..
T Consensus 1082 ~~vll~G~~GtGKT~la~~~~~ea~k~Ge~~~Fit~ee~~~~L~a 1126 (2050)
T 3cmu_A 1082 RIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYA 1126 (2050)
T ss_dssp SEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEECTTSCCCHHHH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEEccccHHHHHH
Confidence 357888899999999999999999999999999999987665544
No 214
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=39.08 E-value=50 Score=22.23 Aligned_cols=35 Identities=26% Similarity=0.391 Sum_probs=22.3
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
+.++++|.-.+.| + =..+|++|+++|++|.++.-.
T Consensus 23 ~~k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~r~ 57 (279)
T 3sju_A 23 RPQTAFVTGVSSG-I--GLAVARTLAARGIAVYGCARD 57 (279)
T ss_dssp --CEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCCH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 3456666644332 2 257899999999998876543
No 215
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=39.04 E-value=28 Score=22.63 Aligned_cols=33 Identities=18% Similarity=0.169 Sum_probs=21.9
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|. .+.|-+ =..++++|+++|++|+++.-.
T Consensus 8 ~~vlVt-Gasggi--G~~la~~l~~~G~~V~~~~r~ 40 (248)
T 2pnf_A 8 KVSLVT-GSTRGI--GRAIAEKLASAGSTVIITGTS 40 (248)
T ss_dssp CEEEET-TCSSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEE-CCCchH--HHHHHHHHHHCCCEEEEEeCC
Confidence 445555 333433 246789999999999887654
No 216
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=38.66 E-value=26 Score=22.95 Aligned_cols=32 Identities=13% Similarity=0.238 Sum_probs=21.5
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
++++|.- +.|-+ =..++++|+++|++|+++.-
T Consensus 8 k~vlVTG-as~gI--G~~ia~~l~~~G~~V~~~~r 39 (241)
T 1dhr_A 8 RRVLVYG-GRGAL--GSRCVQAFRARNWWVASIDV 39 (241)
T ss_dssp CEEEEET-TTSHH--HHHHHHHHHTTTCEEEEEES
T ss_pred CEEEEEC-CCcHH--HHHHHHHHHhCCCEEEEEeC
Confidence 4555553 33333 25789999999999988754
No 217
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=38.63 E-value=58 Score=24.22 Aligned_cols=38 Identities=21% Similarity=0.141 Sum_probs=29.9
Q ss_pred CCeEEEEcCCCcCCh-----HHHHHHHHHHHHCCCeEEEEeCc
Q 040997 3 SPHVLVMPGPAQGHV-----IPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~-----~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
..+|+++-+.+-... .|.+.+.++|..+|.+|.+.=+-
T Consensus 333 g~~V~vlGlafK~~tdD~ReSpa~~ii~~L~~~Ga~V~~~DP~ 375 (444)
T 3vtf_A 333 GRHVGVLGLAFKPNTDDVRESRGVEVARLLLERGARVYVHDPM 375 (444)
T ss_dssp TCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEEeeecCCCCCccccCcHHHHHHHHHHCCCEEEEECCC
Confidence 457888777665444 59999999999999999987553
No 218
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=38.55 E-value=29 Score=22.54 Aligned_cols=20 Identities=20% Similarity=0.230 Sum_probs=16.4
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|+.+.-.
T Consensus 21 ~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 21 RDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 46899999999999887543
No 219
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=38.51 E-value=30 Score=22.43 Aligned_cols=33 Identities=18% Similarity=0.351 Sum_probs=21.9
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCC--eEEEEeCc
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGF--RVTFVNTD 40 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~--~Vt~~~t~ 40 (128)
.+|++.- +.|-+ =..++++|+++|+ +|+.+.-.
T Consensus 19 ~~vlVtG--asg~i--G~~l~~~L~~~G~~~~V~~~~r~ 53 (242)
T 2bka_A 19 KSVFILG--ASGET--GRVLLKEILEQGLFSKVTLIGRR 53 (242)
T ss_dssp CEEEEEC--TTSHH--HHHHHHHHHHHTCCSEEEEEESS
T ss_pred CeEEEEC--CCcHH--HHHHHHHHHcCCCCCEEEEEEcC
Confidence 4555544 33433 2568899999999 99987643
No 220
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=38.46 E-value=22 Score=24.69 Aligned_cols=36 Identities=19% Similarity=0.336 Sum_probs=24.5
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCC-eEEEEeCcc
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGF-RVTFVNTDY 41 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~-~Vt~~~t~~ 41 (128)
|+..+|+++-....| +..|..|+++|+ +||++-...
T Consensus 2 m~~~~vvIIGaG~aG-----l~aA~~l~~~g~~~v~lie~~~ 38 (369)
T 3d1c_A 2 MQHHKVAIIGAGAAG-----IGMAITLKDFGITDVIILEKGT 38 (369)
T ss_dssp CCEEEEEEECCSHHH-----HHHHHHHHHTTCCCEEEECSSS
T ss_pred CccCcEEEECcCHHH-----HHHHHHHHHcCCCcEEEEecCC
Confidence 555567777633222 567788888999 999986553
No 221
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=38.39 E-value=9.6 Score=28.33 Aligned_cols=35 Identities=14% Similarity=0.250 Sum_probs=25.8
Q ss_pred CCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 2 SSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 2 ~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
..+||+++-+.-.| ..||+.|.+.||+||++=...
T Consensus 2 ~~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 2 NAMKIIILGAGQVG-----GTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CCEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEESCH
T ss_pred CcCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 35677777654445 368999999999999986653
No 222
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=38.33 E-value=29 Score=22.72 Aligned_cols=33 Identities=15% Similarity=0.269 Sum_probs=22.0
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
+.++|.... |-+ =.+++++|+++|++|.++.-.
T Consensus 15 k~vlVTGas-~gI--G~~~a~~l~~~G~~V~~~~r~ 47 (249)
T 3f9i_A 15 KTSLITGAS-SGI--GSAIARLLHKLGSKVIISGSN 47 (249)
T ss_dssp CEEEETTTT-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-ChH--HHHHHHHHHHCCCEEEEEcCC
Confidence 445555333 322 257899999999999887654
No 223
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=38.32 E-value=47 Score=18.50 Aligned_cols=13 Identities=31% Similarity=0.286 Sum_probs=8.7
Q ss_pred CCccEEEeCCCcc
Q 040997 106 EKIDCFIADGNMG 118 (128)
Q Consensus 106 ~~~d~vI~D~~~~ 118 (128)
.+||+||.|..++
T Consensus 46 ~~~dlvi~D~~l~ 58 (123)
T 1xhf_A 46 YDINLVIMDINLP 58 (123)
T ss_dssp SCCSEEEECSSCS
T ss_pred CCCCEEEEcCCCC
Confidence 3677888776553
No 224
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=38.06 E-value=30 Score=22.75 Aligned_cols=20 Identities=35% Similarity=0.468 Sum_probs=16.8
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|.++.-.
T Consensus 27 ~~la~~l~~~G~~V~~~~r~ 46 (260)
T 3awd_A 27 LACVTALAEAGARVIIADLD 46 (260)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999887654
No 225
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=38.04 E-value=30 Score=19.33 Aligned_cols=12 Identities=8% Similarity=0.199 Sum_probs=7.9
Q ss_pred CccEEEeCCCcc
Q 040997 107 KIDCFIADGNMG 118 (128)
Q Consensus 107 ~~d~vI~D~~~~ 118 (128)
+||+||.|...+
T Consensus 49 ~~dlvi~d~~~~ 60 (127)
T 2gkg_A 49 RPDLVVLAVDLS 60 (127)
T ss_dssp CCSEEEEESBCG
T ss_pred CCCEEEEeCCCC
Confidence 577777776544
No 226
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=37.99 E-value=53 Score=21.95 Aligned_cols=36 Identities=14% Similarity=0.266 Sum_probs=26.1
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHC---CCeEEEEeCcc
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKH---GFRVTFVNTDY 41 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~r---G~~Vt~~~t~~ 41 (128)
.+++++. .|.| +.|++.+.+.+..+ +.+|+++-...
T Consensus 147 ~~~vlia-gGtG-IaP~~~~l~~l~~~~~~~~~v~l~~~~r 185 (275)
T 1umk_A 147 KSVGMIA-GGTG-ITPMLQVIRAIMKDPDDHTVCHLLFANQ 185 (275)
T ss_dssp SEEEEEE-EGGG-HHHHHHHHHHHHTCTTCCCEEEEEEEES
T ss_pred ceEEEEe-cCcc-HhHHHHHHHHHHhCCCCCcEEEEEEEcC
Confidence 3567666 4556 99999999999875 36788865443
No 227
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=37.81 E-value=30 Score=22.60 Aligned_cols=33 Identities=12% Similarity=0.203 Sum_probs=22.1
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
+.++|. .+.|-+- ..++++|+++|++|.++.-.
T Consensus 8 k~vlVT-GasggiG--~~~a~~l~~~G~~V~~~~r~ 40 (258)
T 3afn_B 8 KRVLIT-GSSQGIG--LATARLFARAGAKVGLHGRK 40 (258)
T ss_dssp CEEEET-TCSSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEe-CCCChHH--HHHHHHHHHCCCEEEEECCC
Confidence 344454 3344443 46899999999999887654
No 228
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=37.74 E-value=67 Score=20.17 Aligned_cols=36 Identities=3% Similarity=0.034 Sum_probs=27.6
Q ss_pred EEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchh
Q 040997 8 VMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYH 43 (128)
Q Consensus 8 ~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~ 43 (128)
++.+...|.-.-+++.++...++|..|..+|.....
T Consensus 113 vI~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s 148 (196)
T 2yva_A 113 LLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGG 148 (196)
T ss_dssp EEEECSSSCCHHHHHHHHHHHHTTCEEEEEECTTCH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCCCCc
Confidence 344456677888899999999999998877776543
No 229
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=37.73 E-value=30 Score=23.05 Aligned_cols=20 Identities=15% Similarity=0.243 Sum_probs=16.3
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|+++.-.
T Consensus 21 ~~ia~~l~~~G~~V~~~~r~ 40 (260)
T 1nff_A 21 ASHVRAMVAEGAKVVFGDIL 40 (260)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 56889999999999887543
No 230
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=37.71 E-value=31 Score=22.38 Aligned_cols=20 Identities=15% Similarity=0.385 Sum_probs=16.4
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|.++.-.
T Consensus 16 ~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 16 EAIARALARDGYALALGARS 35 (235)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 57899999999998876543
No 231
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=37.69 E-value=31 Score=20.06 Aligned_cols=23 Identities=22% Similarity=0.215 Sum_probs=16.0
Q ss_pred HHHHHHHHhcCCCCCccEEEeCCCcc
Q 040997 93 LEKLIEEINSREDEKIDCFIADGNMG 118 (128)
Q Consensus 93 ~~~ll~~l~~~~~~~~d~vI~D~~~~ 118 (128)
.++.++.+.+ .+||+||.|..++
T Consensus 40 ~~~a~~~l~~---~~~dlii~D~~l~ 62 (144)
T 3kht_A 40 GAKALYQVQQ---AKYDLIILDIGLP 62 (144)
T ss_dssp HHHHHHHHTT---CCCSEEEECTTCG
T ss_pred HHHHHHHhhc---CCCCEEEEeCCCC
Confidence 3555555544 5799999998764
No 232
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=37.65 E-value=30 Score=19.69 Aligned_cols=22 Identities=23% Similarity=0.155 Sum_probs=14.2
Q ss_pred HHHHHHHhcCCCCCccEEEeCCCcc
Q 040997 94 EKLIEEINSREDEKIDCFIADGNMG 118 (128)
Q Consensus 94 ~~ll~~l~~~~~~~~d~vI~D~~~~ 118 (128)
++.++.+.+ .+||+||.|...+
T Consensus 41 ~~a~~~l~~---~~~dlvi~d~~l~ 62 (130)
T 3eod_A 41 VDALELLGG---FTPDLMICDIAMP 62 (130)
T ss_dssp HHHHHHHTT---CCCSEEEECCC--
T ss_pred HHHHHHHhc---CCCCEEEEecCCC
Confidence 455555543 5799999998654
No 233
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=37.57 E-value=54 Score=20.34 Aligned_cols=34 Identities=6% Similarity=0.003 Sum_probs=26.8
Q ss_pred cCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchh
Q 040997 10 PGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYH 43 (128)
Q Consensus 10 p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~ 43 (128)
-+...|.-.-++++++.+.++|..|..+|.....
T Consensus 102 ~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s 135 (183)
T 2xhz_A 102 AISNSGESSEITALIPVLKRLHVPLICITGRPES 135 (183)
T ss_dssp EECSSSCCHHHHHHHHHHHTTTCCEEEEESCTTS
T ss_pred EEeCCCCCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 3346677788999999999999998888876544
No 234
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=37.54 E-value=67 Score=19.98 Aligned_cols=34 Identities=12% Similarity=0.009 Sum_probs=25.9
Q ss_pred cCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchh
Q 040997 10 PGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYH 43 (128)
Q Consensus 10 p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~ 43 (128)
.+...|.-.-+++.++.+.++|..|..+|.....
T Consensus 85 ~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s 118 (186)
T 1m3s_A 85 IGSGSGETKSLIHTAAKAKSLHGIVAALTINPES 118 (186)
T ss_dssp EECSSSCCHHHHHHHHHHHHTTCEEEEEESCTTS
T ss_pred EEcCCCCcHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 3345566678899999999999998888776543
No 235
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=37.53 E-value=44 Score=25.14 Aligned_cols=32 Identities=13% Similarity=0.003 Sum_probs=26.3
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
.||.|+-..+.| |-.+|+.|.++|++|+..=.
T Consensus 20 ~~i~~iGiGg~G----ms~lA~~l~~~G~~V~~sD~ 51 (524)
T 3hn7_A 20 MHIHILGICGTF----MGSLALLARALGHTVTGSDA 51 (524)
T ss_dssp CEEEEETTTSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEEecHhh----HHHHHHHHHhCCCEEEEECC
Confidence 578888877776 67799999999999998644
No 236
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=37.49 E-value=25 Score=25.57 Aligned_cols=36 Identities=19% Similarity=0.320 Sum_probs=24.4
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHC--CCeEEEEeCcc
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDY 41 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~r--G~~Vt~~~t~~ 41 (128)
|++.+|+++-....| +..|..|+++ |++||++--..
T Consensus 1 M~~~~VvIIGgG~aG-----l~aA~~L~~~~~~~~V~vie~~~ 38 (449)
T 3kd9_A 1 MSLKKVVIIGGGAAG-----MSAASRVKRLKPEWDVKVFEATE 38 (449)
T ss_dssp -CCCEEEEECCSHHH-----HHHHHHHHHHCTTSEEEEECSSS
T ss_pred CCcCcEEEECCcHHH-----HHHHHHHHHhCcCCCEEEEECCC
Confidence 777788888743334 5567777776 89999985543
No 237
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=37.44 E-value=31 Score=22.87 Aligned_cols=33 Identities=18% Similarity=0.280 Sum_probs=21.9
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.- +.|-+ =..++++|+++|++|+++.-.
T Consensus 15 k~vlVTG-as~gI--G~~ia~~l~~~G~~V~~~~r~ 47 (260)
T 2zat_A 15 KVALVTA-STDGI--GLAIARRLAQDGAHVVVSSRK 47 (260)
T ss_dssp CEEEESS-CSSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC-CCcHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 4455553 33322 357899999999999887543
No 238
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=37.38 E-value=51 Score=20.05 Aligned_cols=32 Identities=19% Similarity=0.042 Sum_probs=23.3
Q ss_pred cCCCcCCh--HHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 10 PGPAQGHV--IPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 10 p~p~~GH~--~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
.-+..|+. .-.++++..++..|++|+++-...
T Consensus 13 ~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~D 46 (136)
T 2hy5_B 13 RKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDD 46 (136)
T ss_dssp CSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGG
T ss_pred eCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEhH
Confidence 33444654 556888999999999999876654
No 239
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=37.37 E-value=88 Score=20.96 Aligned_cols=39 Identities=15% Similarity=0.173 Sum_probs=27.2
Q ss_pred CCCCeEEEEcCCCc-CChH---HHHHHHHHHHHCCCeEEEEeCc
Q 040997 1 MSSPHVLVMPGPAQ-GHVI---PLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 1 m~~~hvl~~p~p~~-GH~~---P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
|+ .+|+++-.+.. -|-. ....+++.|.++|++|..+...
T Consensus 1 m~-~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 1 MT-DKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CC-CEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CC-cEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 53 57888764322 3333 4568999999999999888765
No 240
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=37.24 E-value=38 Score=19.79 Aligned_cols=17 Identities=24% Similarity=0.192 Sum_probs=12.0
Q ss_pred HHHHHHHHCCCeEEEEe
Q 040997 22 EFSQCLAKHGFRVTFVN 38 (128)
Q Consensus 22 ~la~~L~~rG~~Vt~~~ 38 (128)
+.....+..|.+|.+++
T Consensus 70 ~~i~~~~~~G~~V~~l~ 86 (117)
T 3hh1_A 70 RQVIELLEEGSDVALVT 86 (117)
T ss_dssp HHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHCCCeEEEEe
Confidence 33344456799999998
No 241
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=37.09 E-value=31 Score=22.78 Aligned_cols=20 Identities=5% Similarity=0.139 Sum_probs=16.6
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|.++.-.
T Consensus 36 ~~la~~l~~~G~~V~~~~r~ 55 (251)
T 3orf_A 36 AEVVKFFKSKSWNTISIDFR 55 (251)
T ss_dssp HHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 58899999999998887543
No 242
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=37.09 E-value=32 Score=22.46 Aligned_cols=20 Identities=20% Similarity=0.278 Sum_probs=16.5
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|+++.-.
T Consensus 16 ~~~a~~l~~~G~~V~~~~r~ 35 (250)
T 2cfc_A 16 LAIATRFLARGDRVAALDLS 35 (250)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 47899999999999887643
No 243
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=37.06 E-value=29 Score=22.82 Aligned_cols=33 Identities=21% Similarity=0.437 Sum_probs=21.8
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.-.. |-+ =..++++|+++|++|.++.-.
T Consensus 10 k~vlITGas-~gi--G~~~a~~l~~~G~~V~~~~r~ 42 (253)
T 3qiv_A 10 KVGIVTGSG-GGI--GQAYAEALAREGAAVVVADIN 42 (253)
T ss_dssp CEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-ChH--HHHHHHHHHHCCCEEEEEcCC
Confidence 455555333 322 257899999999998886543
No 244
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=37.01 E-value=32 Score=22.52 Aligned_cols=20 Identities=25% Similarity=0.576 Sum_probs=16.7
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|+++.-.
T Consensus 25 ~~la~~l~~~G~~V~~~~r~ 44 (254)
T 2wsb_A 25 LEICRAFAASGARLILIDRE 44 (254)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999887653
No 245
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=37.00 E-value=32 Score=22.46 Aligned_cols=20 Identities=15% Similarity=0.308 Sum_probs=16.6
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|+++.-.
T Consensus 20 ~~~a~~l~~~G~~V~~~~r~ 39 (251)
T 1zk4_A 20 LAIATKFVEEGAKVMITGRH 39 (251)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999887654
No 246
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=36.97 E-value=29 Score=22.74 Aligned_cols=20 Identities=15% Similarity=0.323 Sum_probs=16.4
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|.++.-.
T Consensus 17 ~a~a~~l~~~G~~V~~~~r~ 36 (235)
T 3l6e_A 17 RALTIGLVERGHQVSMMGRR 36 (235)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEECC
Confidence 57899999999998877543
No 247
>2yxn_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, structural genomics, NPPSFA, natio project on protein structural and functional analyses; HET: AZY; 1.80A {Escherichia coli str} PDB: 1wq3_A* 1wq4_A* 1x8x_A* 1vbn_A* 1vbm_A*
Probab=36.94 E-value=34 Score=24.20 Aligned_cols=25 Identities=24% Similarity=0.448 Sum_probs=20.0
Q ss_pred CChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 15 GHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 15 GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
||+.|+.. -++|+..||++.++...
T Consensus 50 Gh~l~l~~-~~~lQ~~g~~~~~~i~D 74 (322)
T 2yxn_A 50 GHLVPLLC-LKRFQQAGHKPVALVGG 74 (322)
T ss_dssp HHHHHHHH-HHHHHHTTCEEEEEECT
T ss_pred HHHHHHHH-HHHHHHcCCcEEEEEcc
Confidence 89997554 56888999999998764
No 248
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=36.93 E-value=31 Score=22.10 Aligned_cols=31 Identities=13% Similarity=0.328 Sum_probs=21.2
Q ss_pred EEEEcCCCcCChHHHHHHHHHHH-HCCCeEEEEeCc
Q 040997 6 VLVMPGPAQGHVIPLLEFSQCLA-KHGFRVTFVNTD 40 (128)
Q Consensus 6 vl~~p~p~~GH~~P~l~la~~L~-~rG~~Vt~~~t~ 40 (128)
|++.- +.|-+- ..++++|+ ++|++|+.+.-.
T Consensus 8 vlVtG--asg~iG--~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 8 ITILG--AAGQIA--QXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp EEEES--TTSHHH--HHHHHHHHHHCCCEEEEEESS
T ss_pred EEEEe--CCcHHH--HHHHHHHHhcCCceEEEEecC
Confidence 55544 334332 57889999 899999987654
No 249
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=36.92 E-value=35 Score=23.79 Aligned_cols=32 Identities=22% Similarity=0.268 Sum_probs=22.9
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++|.|+-....| ..+|+.|++.||+|+++.-.
T Consensus 15 ~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 15 MRFFVLGAGSWG-----TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 467776543334 36789999999999998654
No 250
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=36.88 E-value=32 Score=22.65 Aligned_cols=20 Identities=20% Similarity=0.243 Sum_probs=16.3
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|+++.-.
T Consensus 19 ~~ia~~l~~~G~~V~~~~r~ 38 (245)
T 1uls_A 19 RATLELFAKEGARLVACDIE 38 (245)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 46889999999999887543
No 251
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=36.85 E-value=29 Score=22.97 Aligned_cols=20 Identities=10% Similarity=0.290 Sum_probs=16.7
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..+|++|+++|++|.++.-.
T Consensus 30 ~~ia~~l~~~G~~V~~~~r~ 49 (271)
T 3ek2_A 30 YGIAKACKREGAELAFTYVG 49 (271)
T ss_dssp HHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHcCCCEEEEecc
Confidence 57899999999999887544
No 252
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=36.79 E-value=96 Score=20.90 Aligned_cols=33 Identities=21% Similarity=0.293 Sum_probs=22.4
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|...+.| + =..+|++|+++|++|.++.-.
T Consensus 29 k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~r~ 61 (283)
T 3v8b_A 29 PVALITGAGSG-I--GRATALALAADGVTVGALGRT 61 (283)
T ss_dssp CEEEEESCSSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 45666644332 2 257899999999998887543
No 253
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=36.79 E-value=32 Score=22.58 Aligned_cols=19 Identities=11% Similarity=0.200 Sum_probs=15.9
Q ss_pred HHHHHHHHHCCCeEEEEeC
Q 040997 21 LEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t 39 (128)
..++++|+++|++|+++.-
T Consensus 15 ~~~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 15 AATRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp HHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHCCCEEEEEeC
Confidence 5788999999999988754
No 254
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=36.74 E-value=26 Score=22.87 Aligned_cols=19 Identities=16% Similarity=0.321 Sum_probs=16.0
Q ss_pred HHHHHHHHHCCCeEEEEeC
Q 040997 21 LEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t 39 (128)
..++++|+++|++|+++.-
T Consensus 17 ~~~a~~l~~~G~~V~~~~r 35 (236)
T 1ooe_A 17 SAILEFFKKNGYTVLNIDL 35 (236)
T ss_dssp HHHHHHHHHTTEEEEEEES
T ss_pred HHHHHHHHHCCCEEEEEec
Confidence 5789999999999988654
No 255
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=36.68 E-value=39 Score=19.51 Aligned_cols=13 Identities=31% Similarity=0.419 Sum_probs=8.6
Q ss_pred CCccEEEeCCCcc
Q 040997 106 EKIDCFIADGNMG 118 (128)
Q Consensus 106 ~~~d~vI~D~~~~ 118 (128)
.+||+||.|..++
T Consensus 43 ~~~dlvl~D~~lp 55 (139)
T 2jk1_A 43 EWVQVIICDQRMP 55 (139)
T ss_dssp SCEEEEEEESCCS
T ss_pred CCCCEEEEeCCCC
Confidence 3577777776553
No 256
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=36.65 E-value=11 Score=25.19 Aligned_cols=16 Identities=19% Similarity=0.492 Sum_probs=13.7
Q ss_pred CChHHHHHHHHHHHHC
Q 040997 15 GHVIPLLEFSQCLAKH 30 (128)
Q Consensus 15 GH~~P~l~la~~L~~r 30 (128)
+|+||.+-|+..+..+
T Consensus 63 aHlNPAVTla~~~~g~ 78 (223)
T 3gd8_A 63 GHINPAVTVAMVCTRK 78 (223)
T ss_dssp CCCSHHHHHHHHHTTS
T ss_pred ceEcHHHHHHHHHcCC
Confidence 7999999999887654
No 257
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=36.62 E-value=27 Score=22.68 Aligned_cols=17 Identities=24% Similarity=0.364 Sum_probs=15.1
Q ss_pred HHHHHHHHHCCCeEEEE
Q 040997 21 LEFSQCLAKHGFRVTFV 37 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~ 37 (128)
..++++|+++|++|+++
T Consensus 15 ~~~a~~l~~~G~~v~~~ 31 (245)
T 2ph3_A 15 RAIALRLAEDGFALAIH 31 (245)
T ss_dssp HHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHCCCEEEEE
Confidence 47899999999999887
No 258
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=36.60 E-value=32 Score=22.65 Aligned_cols=20 Identities=15% Similarity=0.248 Sum_probs=16.7
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|+++.-.
T Consensus 26 ~~~a~~l~~~G~~V~~~~r~ 45 (265)
T 2o23_A 26 LATAERLVGQGASAVLLDLP 45 (265)
T ss_dssp HHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999887543
No 259
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=36.57 E-value=33 Score=22.55 Aligned_cols=32 Identities=25% Similarity=0.236 Sum_probs=21.2
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
++++|.- +.|-+ =..++++|+++|++|+++.-
T Consensus 5 k~vlVTG-as~gi--G~~ia~~l~~~G~~V~~~~r 36 (246)
T 2uvd_A 5 KVALVTG-ASRGI--GRAIAIDLAKQGANVVVNYA 36 (246)
T ss_dssp CEEEETT-CSSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEC-CCcHH--HHHHHHHHHHCCCEEEEEeC
Confidence 3455553 33322 25688999999999988754
No 260
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=36.50 E-value=32 Score=19.61 Aligned_cols=22 Identities=23% Similarity=0.271 Sum_probs=14.3
Q ss_pred HHHHHHHhcCCCCCccEEEeCCCcc
Q 040997 94 EKLIEEINSREDEKIDCFIADGNMG 118 (128)
Q Consensus 94 ~~ll~~l~~~~~~~~d~vI~D~~~~ 118 (128)
++.++.+.+ .+||+||.|..++
T Consensus 37 ~~a~~~l~~---~~~dlvi~d~~l~ 58 (133)
T 3nhm_A 37 ASGLQQALA---HPPDVLISDVNMD 58 (133)
T ss_dssp HHHHHHHHH---SCCSEEEECSSCS
T ss_pred HHHHHHHhc---CCCCEEEEeCCCC
Confidence 334444443 4799999998654
No 261
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=36.46 E-value=65 Score=18.90 Aligned_cols=40 Identities=18% Similarity=0.226 Sum_probs=29.6
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHC-CCeEEEEeCc
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKH-GFRVTFVNTD 40 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~r-G~~Vt~~~t~ 40 (128)
|...+=+++|.=+.-+-.-.++.|..|+.+ |.+++++..-
T Consensus 3 m~~~~~ILv~vD~s~~s~~al~~a~~la~~~~a~l~ll~v~ 43 (150)
T 3tnj_A 3 MSVYHHILLAVDFSSEDSQVVQKVRNLASQIGARLSLIHVL 43 (150)
T ss_dssp -CCCSEEEEECCCSTTHHHHHHHHHHHHHHHTCEEEEEEEE
T ss_pred CCccceEEEEeCCCHHHHHHHHHHHHHHhhcCCEEEEEEEE
Confidence 333444566777778888999999999875 8888887653
No 262
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=36.40 E-value=28 Score=25.23 Aligned_cols=31 Identities=19% Similarity=0.309 Sum_probs=21.9
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
+|++|-....| +.+|..|+++|++|+++--.
T Consensus 24 ~ViIVGaGpaG-----l~~A~~La~~G~~V~viE~~ 54 (430)
T 3ihm_A 24 RIGIVGAGTAG-----LHLGLFLRQHDVDVTVYTDR 54 (430)
T ss_dssp EEEEECCHHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEECCcHHH-----HHHHHHHHHCCCeEEEEcCC
Confidence 56666533224 56888999999999999643
No 263
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=36.36 E-value=33 Score=22.60 Aligned_cols=20 Identities=30% Similarity=0.227 Sum_probs=16.6
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|+++.-.
T Consensus 21 ~~la~~l~~~G~~V~~~~r~ 40 (264)
T 2pd6_A 21 RAVSVRLAGEGATVAACDLD 40 (264)
T ss_dssp HHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999887543
No 264
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=36.34 E-value=30 Score=22.98 Aligned_cols=33 Identities=24% Similarity=0.413 Sum_probs=21.9
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.-.+.| + =..++++|+++|++|.++.-.
T Consensus 7 k~vlVTGas~g-I--G~aia~~l~~~G~~V~~~~r~ 39 (257)
T 3imf_A 7 KVVIITGGSSG-M--GKGMATRFAKEGARVVITGRT 39 (257)
T ss_dssp CEEEETTTTSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 45556543332 2 267899999999998876543
No 265
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=36.30 E-value=33 Score=22.38 Aligned_cols=33 Identities=18% Similarity=0.328 Sum_probs=22.0
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|... .|-+- ..++++|+++|++|.++.-.
T Consensus 15 k~vlITGa-s~gIG--~~ia~~l~~~G~~V~~~~r~ 47 (247)
T 3i1j_A 15 RVILVTGA-ARGIG--AAAARAYAAHGASVVLLGRT 47 (247)
T ss_dssp CEEEESST-TSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCC-CChHH--HHHHHHHHHCCCEEEEEecC
Confidence 45566533 33332 47899999999998876543
No 266
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=36.26 E-value=12 Score=25.33 Aligned_cols=16 Identities=19% Similarity=0.326 Sum_probs=14.2
Q ss_pred CChHHHHHHHHHHHHC
Q 040997 15 GHVIPLLEFSQCLAKH 30 (128)
Q Consensus 15 GH~~P~l~la~~L~~r 30 (128)
||+||.+-|+..+..+
T Consensus 63 aHlNPAVTla~~~~g~ 78 (234)
T 2o9g_A 63 GHFNPAVTIGLWAGGR 78 (234)
T ss_dssp CCCSHHHHHHHHHTTS
T ss_pred ceeCHHHHHHHHHhCC
Confidence 8999999999888765
No 267
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=36.22 E-value=33 Score=22.83 Aligned_cols=33 Identities=21% Similarity=0.365 Sum_probs=21.7
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|... .|-+ =..++++|+++|++|+++.-.
T Consensus 8 k~vlVTGa-s~gI--G~~ia~~l~~~G~~V~~~~r~ 40 (267)
T 2gdz_A 8 KVALVTGA-AQGI--GRAFAEALLLKGAKVALVDWN 40 (267)
T ss_dssp CEEEEETT-TSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECC-CCcH--HHHHHHHHHHCCCEEEEEECC
Confidence 45555533 3322 257899999999999887543
No 268
>3zxs_A Cryptochrome B, rscryb; lyase, cryPro, lumazine, iron-sulfur-cluster; HET: FAD DLZ; 2.70A {Rhodobacter sphaeroides}
Probab=36.21 E-value=38 Score=25.81 Aligned_cols=23 Identities=26% Similarity=0.589 Sum_probs=20.9
Q ss_pred ChHHHHHHHHHHHHCCCeEEEEe
Q 040997 16 HVIPLLEFSQCLAKHGFRVTFVN 38 (128)
Q Consensus 16 H~~P~l~la~~L~~rG~~Vt~~~ 38 (128)
++..|-++++.|.++|++|++..
T Consensus 65 l~saMr~fa~~L~~~G~~v~y~~ 87 (522)
T 3zxs_A 65 ILAAMRKFARRLQERGFRVAYSR 87 (522)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHHHHhCCCeEEEEe
Confidence 45789999999999999999987
No 269
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=36.20 E-value=30 Score=22.90 Aligned_cols=33 Identities=12% Similarity=0.160 Sum_probs=22.3
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
+.++|...+ |-+ =..++++|+++|++|.++.-.
T Consensus 8 k~vlVTGas-~gI--G~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 8 RHALITAGT-KGL--GKQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp CEEEETTTT-SHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-chh--HHHHHHHHHHCCCEEEEEcCC
Confidence 455666333 322 258899999999999887443
No 270
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=36.13 E-value=33 Score=22.99 Aligned_cols=33 Identities=21% Similarity=0.298 Sum_probs=21.7
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|... .|-+ =..++++|+++|++|+++.-.
T Consensus 22 k~~lVTGa-s~gI--G~~ia~~l~~~G~~V~~~~r~ 54 (267)
T 1vl8_A 22 RVALVTGG-SRGL--GFGIAQGLAEAGCSVVVASRN 54 (267)
T ss_dssp CEEEEETT-TSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECC-CCHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 44555533 3322 257899999999999887543
No 271
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=36.10 E-value=63 Score=22.30 Aligned_cols=37 Identities=24% Similarity=0.389 Sum_probs=27.3
Q ss_pred CCeEEEEcCCCcCChHHH--HHHHHHHHHCC-CeEEEEeCc
Q 040997 3 SPHVLVMPGPAQGHVIPL--LEFSQCLAKHG-FRVTFVNTD 40 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~--l~la~~L~~rG-~~Vt~~~t~ 40 (128)
+.+||++. ...+|-.+- -.|.+.|.+.| ++|++..++
T Consensus 4 ~~kvLiv~-G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 4 PIKTLLIT-GQNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CEEEEEEE-SCCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred ceEEEEEc-CCCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 45899994 334886444 56778888888 999999774
No 272
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=36.10 E-value=12 Score=25.48 Aligned_cols=17 Identities=18% Similarity=0.237 Sum_probs=14.6
Q ss_pred cCChHHHHHHHHHHHHC
Q 040997 14 QGHVIPLLEFSQCLAKH 30 (128)
Q Consensus 14 ~GH~~P~l~la~~L~~r 30 (128)
.||+||.+-++-.+..+
T Consensus 78 GaH~NPAVTla~~~~g~ 94 (246)
T 2f2b_A 78 GCHINPAVTIGLWSVKK 94 (246)
T ss_dssp CCCCSHHHHHHHHHTTS
T ss_pred cceeCHHHHHHHHHhCC
Confidence 38999999999888765
No 273
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=36.10 E-value=34 Score=22.37 Aligned_cols=20 Identities=20% Similarity=0.514 Sum_probs=16.5
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|.++.-.
T Consensus 16 ~~~a~~l~~~G~~V~~~~r~ 35 (239)
T 2ekp_A 16 RAIAEALVARGYRVAIASRN 35 (239)
T ss_dssp HHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999887543
No 274
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=36.08 E-value=33 Score=22.65 Aligned_cols=20 Identities=20% Similarity=0.338 Sum_probs=16.3
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|.++.-.
T Consensus 33 ~~~a~~l~~~G~~V~~~~r~ 52 (249)
T 1o5i_A 33 RAVADVLSQEGAEVTICARN 52 (249)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEcCC
Confidence 46899999999999887543
No 275
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=36.06 E-value=16 Score=25.66 Aligned_cols=35 Identities=26% Similarity=0.384 Sum_probs=22.9
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
|+...|+++-....| +.+|..|+++|++|+++--.
T Consensus 2 m~~~dVvIvG~G~aG-----l~~A~~La~~G~~V~l~E~~ 36 (397)
T 3cgv_A 2 METYDVLVVGGGPGG-----STAARYAAKYGLKTLMIEKR 36 (397)
T ss_dssp EEEEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CccCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEeCC
Confidence 334456666533224 56778888999999998543
No 276
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=36.01 E-value=16 Score=24.81 Aligned_cols=31 Identities=13% Similarity=0.113 Sum_probs=22.7
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
+|+++-....| +..|..|+++|++|+++--.
T Consensus 9 ~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~ 39 (332)
T 3lzw_A 9 DITIIGGGPVG-----LFTAFYGGMRQASVKIIESL 39 (332)
T ss_dssp EEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred eEEEECCCHHH-----HHHHHHHHHCCCCEEEEEcC
Confidence 67777643334 57788888899999998654
No 277
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=35.95 E-value=32 Score=19.57 Aligned_cols=11 Identities=27% Similarity=0.274 Sum_probs=7.0
Q ss_pred CccEEEeCCCc
Q 040997 107 KIDCFIADGNM 117 (128)
Q Consensus 107 ~~d~vI~D~~~ 117 (128)
+||+||.|..+
T Consensus 48 ~~dlvllD~~l 58 (130)
T 1dz3_A 48 RPDILLLDIIM 58 (130)
T ss_dssp CCSEEEEESCC
T ss_pred CCCEEEEecCC
Confidence 46777777654
No 278
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=35.88 E-value=31 Score=22.92 Aligned_cols=33 Identities=15% Similarity=0.332 Sum_probs=21.6
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.-. .|-+ =..++++|+++|++|.++.-.
T Consensus 9 k~vlVTGa-s~gI--G~~ia~~l~~~G~~V~~~~r~ 41 (259)
T 4e6p_A 9 KSALITGS-ARGI--GRAFAEAYVREGATVAIADID 41 (259)
T ss_dssp CEEEEETC-SSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECC-CcHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 45555533 3323 247899999999999877543
No 279
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=35.87 E-value=31 Score=22.75 Aligned_cols=20 Identities=20% Similarity=0.355 Sum_probs=16.5
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|.++.-.
T Consensus 16 ~~ia~~l~~~G~~V~~~~r~ 35 (247)
T 3dii_A 16 KQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999887543
No 280
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=35.86 E-value=22 Score=22.79 Aligned_cols=25 Identities=8% Similarity=-0.096 Sum_probs=21.3
Q ss_pred HH-HHHHHHHHHHCCCeEEEEeCcch
Q 040997 18 IP-LLEFSQCLAKHGFRVTFVNTDYY 42 (128)
Q Consensus 18 ~P-~l~la~~L~~rG~~Vt~~~t~~~ 42 (128)
|| .+++|+++..+|+.|..+|+...
T Consensus 90 n~~~ie~A~~ake~G~~vIaITs~~~ 115 (170)
T 3jx9_A 90 RSDLLASLARYDAWHTPYSIITLGDV 115 (170)
T ss_dssp CHHHHHHHHHHHHHTCCEEEEESSCC
T ss_pred CHHHHHHHHHHHHCCCcEEEEeCcch
Confidence 45 89999999999999999998333
No 281
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=35.86 E-value=31 Score=23.01 Aligned_cols=20 Identities=20% Similarity=0.298 Sum_probs=16.3
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|.++.-.
T Consensus 27 ~~ia~~l~~~G~~V~~~~r~ 46 (267)
T 1iy8_A 27 RATAVRLAAEGAKLSLVDVS 46 (267)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999887543
No 282
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=35.85 E-value=56 Score=21.34 Aligned_cols=35 Identities=14% Similarity=0.125 Sum_probs=23.9
Q ss_pred CCeEEEEcCCCc--CChHHHHHHHHHHHHCCCeEEEE
Q 040997 3 SPHVLVMPGPAQ--GHVIPLLEFSQCLAKHGFRVTFV 37 (128)
Q Consensus 3 ~~hvl~~p~p~~--GH~~P~l~la~~L~~rG~~Vt~~ 37 (128)
.++|+++|+.+. .+-.=.-.+.+.|.+.|++|..+
T Consensus 27 ~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 27 GKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp TCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 468899997754 22223445677888889888776
No 283
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=35.79 E-value=48 Score=18.67 Aligned_cols=11 Identities=18% Similarity=0.323 Sum_probs=6.8
Q ss_pred CccEEEeCCCc
Q 040997 107 KIDCFIADGNM 117 (128)
Q Consensus 107 ~~d~vI~D~~~ 117 (128)
+||+||.|..+
T Consensus 47 ~~dlvi~D~~l 57 (126)
T 1dbw_A 47 RNGVLVTDLRM 57 (126)
T ss_dssp CSEEEEEECCS
T ss_pred CCCEEEEECCC
Confidence 56666666544
No 284
>1jmt_B Splicing factor U2AF 65 kDa subunit; RRM, RNA splicing, proline, PPII helix, peptide recognition, RNA binding protein; 2.20A {Homo sapiens}
Probab=35.75 E-value=15 Score=16.24 Aligned_cols=14 Identities=29% Similarity=0.641 Sum_probs=11.4
Q ss_pred EcCCCcCChHHHHH
Q 040997 9 MPGPAQGHVIPLLE 22 (128)
Q Consensus 9 ~p~p~~GH~~P~l~ 22 (128)
+|.+|.-|+.|+--
T Consensus 10 vpP~GyE~vtp~qy 23 (28)
T 1jmt_B 10 VPPPGFEHITPMQY 23 (28)
T ss_dssp CCCTTCTTSCHHHH
T ss_pred CCCCCccccCHHHH
Confidence 57789999999863
No 285
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=35.74 E-value=29 Score=24.82 Aligned_cols=35 Identities=14% Similarity=0.214 Sum_probs=23.9
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
|+.++|.|+- .|.+- ..+|+.|+++|++|+++...
T Consensus 20 m~~mkIgiIG---lG~mG--~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 20 FQSMQIGMIG---LGRMG--ADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp --CCEEEEEC---CSHHH--HHHHHHHHHTTCEEEEECSC
T ss_pred hcCCEEEEEC---chHHH--HHHHHHHHhCCCEEEEEeCC
Confidence 3456777775 44443 35788999999999988654
No 286
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=35.73 E-value=80 Score=19.67 Aligned_cols=33 Identities=12% Similarity=0.167 Sum_probs=24.7
Q ss_pred EEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 6 VLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 6 vl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
|+++. ...|.-.-+..+++.|+++|+.|..+--
T Consensus 31 vv~~h-G~~~~~~~~~~~~~~l~~~g~~v~~~d~ 63 (236)
T 1zi8_A 31 IVIAQ-DIFGVNAFMRETVSWLVDQGYAAVCPDL 63 (236)
T ss_dssp EEEEC-CTTBSCHHHHHHHHHHHHTTCEEEEECG
T ss_pred EEEEc-CCCCCCHHHHHHHHHHHhCCcEEEeccc
Confidence 55555 4456667888999999999999877653
No 287
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=35.71 E-value=59 Score=19.96 Aligned_cols=41 Identities=22% Similarity=0.184 Sum_probs=31.1
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
|+...|++.-.+|.|=-.=.-.|+++|-..|.+..++.+..
T Consensus 1 M~~~~I~i~G~~GsGKsT~~~~L~~~l~~~g~~~~~i~~~~ 41 (192)
T 1kht_A 1 MKNKVVVVTGVPGVGSTTSSQLAMDNLRKEGVNYKMVSFGS 41 (192)
T ss_dssp --CCEEEEECCTTSCHHHHHHHHHHHHHTTTCCCEEEEHHH
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHhcCcceEEEehHH
Confidence 66677888889999988888888888888887666776543
No 288
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=35.69 E-value=31 Score=22.93 Aligned_cols=20 Identities=10% Similarity=0.192 Sum_probs=16.5
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|+++.-.
T Consensus 30 ~~~a~~l~~~G~~V~~~~r~ 49 (278)
T 2bgk_A 30 ETTAKLFVRYGAKVVIADIA 49 (278)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEcCC
Confidence 57899999999999887543
No 289
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=35.65 E-value=32 Score=22.42 Aligned_cols=18 Identities=11% Similarity=0.121 Sum_probs=15.6
Q ss_pred HHHHHHHHHCCCeEEEEe
Q 040997 21 LEFSQCLAKHGFRVTFVN 38 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~ 38 (128)
..++++|+++|++|+++.
T Consensus 19 ~~~a~~l~~~G~~V~~~~ 36 (247)
T 2hq1_A 19 KAIAWKLGNMGANIVLNG 36 (247)
T ss_dssp HHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHCCCEEEEEc
Confidence 578999999999998873
No 290
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=35.61 E-value=68 Score=19.93 Aligned_cols=36 Identities=6% Similarity=-0.072 Sum_probs=28.0
Q ss_pred EEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchh
Q 040997 8 VMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYH 43 (128)
Q Consensus 8 ~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~ 43 (128)
++.+...|.-.-+++.++.+..+|..|..+|.....
T Consensus 91 ~i~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s 126 (187)
T 3sho_A 91 MIGVSVWRYLRDTVAALAGAAERGVPTMALTDSSVS 126 (187)
T ss_dssp EEEECCSSCCHHHHHHHHHHHHTTCCEEEEESCTTS
T ss_pred EEEEeCCCCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 333456677788999999999999998888876543
No 291
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=35.58 E-value=41 Score=22.96 Aligned_cols=35 Identities=20% Similarity=0.308 Sum_probs=22.3
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCC--CeEEEEeC
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHG--FRVTFVNT 39 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG--~~Vt~~~t 39 (128)
|..++|++.- +.|-+- .+|+++|+++| ++|+.+.-
T Consensus 1 M~~m~vlVTG--atG~iG--~~l~~~L~~~g~~~~V~~~~r 37 (336)
T 2hun_A 1 MHSMKLLVTG--GMGFIG--SNFIRYILEKHPDWEVINIDK 37 (336)
T ss_dssp --CCEEEEET--TTSHHH--HHHHHHHHHHCTTCEEEEEEC
T ss_pred CCCCeEEEEC--CCchHH--HHHHHHHHHhCCCCEEEEEec
Confidence 6666776665 344432 46788998886 89888753
No 292
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=35.58 E-value=34 Score=22.85 Aligned_cols=32 Identities=25% Similarity=0.317 Sum_probs=21.9
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
++++|.-.+ |-+ =..++++|+++|++|+++.-
T Consensus 12 k~~lVTGas-~gI--G~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 12 PAAVITGGA-RRI--GHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp CEEEETTCS-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-cHH--HHHHHHHHHHCCCEEEEEeC
Confidence 355566333 323 35789999999999988764
No 293
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=35.56 E-value=25 Score=23.50 Aligned_cols=33 Identities=21% Similarity=0.272 Sum_probs=24.1
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
++|++.- + |.+- .+|+++|.++|++|+.++-..
T Consensus 6 ~~ilVtG--a-G~iG--~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFG--H-GYTA--RVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEET--C-CHHH--HHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEEC--C-cHHH--HHHHHHHHHCCCEEEEEEcCh
Confidence 4677775 3 5554 367899999999999987654
No 294
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=35.55 E-value=34 Score=22.53 Aligned_cols=19 Identities=16% Similarity=0.183 Sum_probs=15.8
Q ss_pred HHHHHHHHHCCCeEEEEeC
Q 040997 21 LEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t 39 (128)
..++++|+++|++|+++.-
T Consensus 21 ~~ia~~l~~~G~~V~~~~r 39 (250)
T 2fwm_X 21 YATALAFVEAGAKVTGFDQ 39 (250)
T ss_dssp HHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHCCCEEEEEeC
Confidence 4689999999999988653
No 295
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=35.51 E-value=35 Score=22.50 Aligned_cols=33 Identities=12% Similarity=0.215 Sum_probs=21.8
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.- +.|-+ =..++++|+++|++|.++.-.
T Consensus 8 k~vlVTG-as~gI--G~~ia~~l~~~G~~V~~~~r~ 40 (249)
T 2ew8_A 8 KLAVITG-GANGI--GRAIAERFAVEGADIAIADLV 40 (249)
T ss_dssp CEEEEET-TTSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeC-CCcHH--HHHHHHHHHHCCCEEEEEcCC
Confidence 3455553 33333 257899999999999887543
No 296
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=35.42 E-value=66 Score=22.69 Aligned_cols=37 Identities=19% Similarity=0.191 Sum_probs=31.3
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
..|++...|..+|..|..+++++..++|.+|...+..
T Consensus 83 iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVtaNK~ 119 (325)
T 3ing_A 83 ADLLVDCTPASRDGVREYSLYRMAFESGMNVVTANKS 119 (325)
T ss_dssp CSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEECCCH
T ss_pred CCEEEECCCCccccchHHHHHHHHHHCCCeEEEcCch
Confidence 3578888888899999999999999999998776554
No 297
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=35.40 E-value=55 Score=19.19 Aligned_cols=12 Identities=17% Similarity=0.199 Sum_probs=7.7
Q ss_pred CCccEEEeCCCc
Q 040997 106 EKIDCFIADGNM 117 (128)
Q Consensus 106 ~~~d~vI~D~~~ 117 (128)
.+||+||.|..+
T Consensus 50 ~~~dlii~D~~l 61 (153)
T 3cz5_A 50 TTPDIVVMDLTL 61 (153)
T ss_dssp TCCSEEEECSCC
T ss_pred CCCCEEEEecCC
Confidence 357777777654
No 298
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=35.39 E-value=35 Score=22.40 Aligned_cols=32 Identities=16% Similarity=0.257 Sum_probs=21.4
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
++++|.- +.|-+ =..++++|+++|++|+++.-
T Consensus 7 k~vlVTG-as~gI--G~~ia~~l~~~G~~V~~~~r 38 (246)
T 2ag5_A 7 KVIILTA-AAQGI--GQAAALAFAREGAKVIATDI 38 (246)
T ss_dssp CEEEESS-TTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeC-CCcHH--HHHHHHHHHHCCCEEEEEEC
Confidence 4555553 33322 25788999999999988754
No 299
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=35.38 E-value=35 Score=22.61 Aligned_cols=20 Identities=20% Similarity=0.180 Sum_probs=16.4
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|+++.-.
T Consensus 19 ~~ia~~l~~~G~~V~~~~r~ 38 (254)
T 1hdc_A 19 AEAARQAVAAGARVVLADVL 38 (254)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 47899999999999887543
No 300
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=35.34 E-value=35 Score=22.30 Aligned_cols=33 Identities=24% Similarity=0.317 Sum_probs=21.8
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.-.. |-+ =..++++|+++|++|.++.-.
T Consensus 6 k~vlITGas-~gI--G~~~a~~l~~~G~~v~~~~r~ 38 (247)
T 3lyl_A 6 KVALVTGAS-RGI--GFEVAHALASKGATVVGTATS 38 (247)
T ss_dssp CEEEESSCS-SHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCC-ChH--HHHHHHHHHHCCCEEEEEeCC
Confidence 455555333 322 257899999999998876554
No 301
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=35.27 E-value=79 Score=19.51 Aligned_cols=37 Identities=24% Similarity=0.369 Sum_probs=30.9
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
.-|++.-.+|.|=-.=.-.|++.|..+|.+|.++...
T Consensus 14 ~~i~l~G~~GsGKsT~~~~L~~~l~~~~~~~~~~~~d 50 (186)
T 2yvu_A 14 IVVWLTGLPGSGKTTIATRLADLLQKEGYRVEVLDGD 50 (186)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEHH
T ss_pred cEEEEEcCCCCCHHHHHHHHHHHHHhcCCeEEEeeHH
Confidence 4577888899999998899999999999998887543
No 302
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=35.26 E-value=43 Score=25.61 Aligned_cols=30 Identities=27% Similarity=0.363 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHCCCeEEEEeCcchhhhhhhh
Q 040997 18 IPLLEFSQCLAKHGFRVTFVNTDYYHKRVVES 49 (128)
Q Consensus 18 ~P~l~la~~L~~rG~~Vt~~~t~~~~~~~~~~ 49 (128)
.-++++++.|...|++ ++.|....+.+...
T Consensus 35 ~glv~~Ak~L~~lGfe--I~ATgGTak~L~e~ 64 (534)
T 4ehi_A 35 EGIVEFGKELENLGFE--ILSTGGTFKLLKEN 64 (534)
T ss_dssp TTHHHHHHHHHHTTCE--EEECHHHHHHHHHT
T ss_pred ccHHHHHHHHHHCCCE--EEEccHHHHHHHHC
Confidence 4478999999999998 56888887776663
No 303
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=35.17 E-value=32 Score=22.89 Aligned_cols=34 Identities=15% Similarity=0.340 Sum_probs=22.6
Q ss_pred eEEEEcCCCc-CChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQ-GHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~-GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.-.+. |-+- ..++++|+++|++|+++.-.
T Consensus 10 k~vlVTGas~~~gIG--~~ia~~l~~~G~~V~~~~r~ 44 (265)
T 1qsg_A 10 KRILVTGVASKLSIA--YGIAQAMHREGAELAFTYQN 44 (265)
T ss_dssp CEEEECCCCSTTSHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCCCCCHH--HHHHHHHHHCCCEEEEEcCc
Confidence 4555654331 3332 57899999999999887543
No 304
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=35.16 E-value=69 Score=23.54 Aligned_cols=39 Identities=21% Similarity=0.273 Sum_probs=32.4
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHC-CCeEEEEeCcchh
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKH-GFRVTFVNTDYYH 43 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~r-G~~Vt~~~t~~~~ 43 (128)
.|+++..+|.|=-.-...||..|+.+ |.+|.++....+.
T Consensus 102 vI~ivG~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~r 141 (433)
T 2xxa_A 102 VVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYR 141 (433)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEECCCSS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCCC
Confidence 35555667789999999999999999 9999998887543
No 305
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=35.15 E-value=34 Score=23.02 Aligned_cols=34 Identities=24% Similarity=0.406 Sum_probs=23.4
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
.++++|.....| | =..++++|+++|++|.++.-.
T Consensus 12 ~k~vlITGas~G-I--G~~~a~~L~~~G~~V~~~~r~ 45 (311)
T 3o26_A 12 RRCAVVTGGNKG-I--GFEICKQLSSNGIMVVLTCRD 45 (311)
T ss_dssp CCEEEESSCSSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CcEEEEecCCch-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 356677644432 2 257899999999998887544
No 306
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=35.12 E-value=47 Score=19.07 Aligned_cols=22 Identities=14% Similarity=0.054 Sum_probs=13.5
Q ss_pred HHHHHHHhcCCCCCccEEEeCCCcc
Q 040997 94 EKLIEEINSREDEKIDCFIADGNMG 118 (128)
Q Consensus 94 ~~ll~~l~~~~~~~~d~vI~D~~~~ 118 (128)
++.++.+.+ .+||+||.|...+
T Consensus 41 ~~a~~~l~~---~~~dlii~d~~l~ 62 (142)
T 3cg4_A 41 GQCIDLLKK---GFSGVVLLDIMMP 62 (142)
T ss_dssp HHHHHHHHT---CCCEEEEEESCCS
T ss_pred HHHHHHHHh---cCCCEEEEeCCCC
Confidence 444555543 4688888887553
No 307
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=35.12 E-value=1e+02 Score=20.74 Aligned_cols=32 Identities=13% Similarity=0.250 Sum_probs=21.4
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
++++|...+. -+ =..+|++|+++|++|.++.-
T Consensus 9 k~vlVTGas~-GI--G~aia~~la~~G~~V~~~~r 40 (280)
T 3tox_A 9 KIAIVTGASS-GI--GRAAALLFAREGAKVVVTAR 40 (280)
T ss_dssp CEEEESSTTS-HH--HHHHHHHHHHTTCEEEECCS
T ss_pred CEEEEECCCc-HH--HHHHHHHHHHCCCEEEEEEC
Confidence 5666664443 22 25788999999999876543
No 308
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=35.11 E-value=36 Score=22.14 Aligned_cols=20 Identities=30% Similarity=0.230 Sum_probs=16.3
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|.++.-.
T Consensus 21 ~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 3d3w_A 21 RGTVQALHATGARVVAVSRT 40 (244)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 57889999999999887543
No 309
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=35.11 E-value=29 Score=20.41 Aligned_cols=20 Identities=35% Similarity=0.396 Sum_probs=13.8
Q ss_pred CCccEEEeCCCccc--HHHHHH
Q 040997 106 EKIDCFIADGNMGW--SLEVAK 125 (128)
Q Consensus 106 ~~~d~vI~D~~~~~--~~~vA~ 125 (128)
.+||+||.|..++. +.++.+
T Consensus 57 ~~~dlvl~D~~mp~~~g~~~~~ 78 (143)
T 3m6m_D 57 EDYDAVIVDLHMPGMNGLDMLK 78 (143)
T ss_dssp SCCSEEEEESCCSSSCHHHHHH
T ss_pred CCCCEEEEeCCCCCCCHHHHHH
Confidence 47999999987653 444444
No 310
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=35.11 E-value=32 Score=22.80 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=22.4
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|...+.| + =..++++|+++|++|.++.-.
T Consensus 8 k~vlVTGas~G-I--G~aia~~l~~~G~~V~~~~r~ 40 (252)
T 3h7a_A 8 ATVAVIGAGDY-I--GAEIAKKFAAEGFTVFAGRRN 40 (252)
T ss_dssp CEEEEECCSSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCch-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 45566633332 2 357899999999998887543
No 311
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=35.10 E-value=27 Score=23.87 Aligned_cols=32 Identities=22% Similarity=0.318 Sum_probs=21.4
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
.+|+++-....| +..|..|+++|++|+++-..
T Consensus 6 ~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~ 37 (335)
T 2zbw_A 6 TDVLIVGAGPTG-----LFAGFYVGMRGLSFRFVDPL 37 (335)
T ss_dssp EEEEEECCSHHH-----HHHHHHHHHTTCCEEEEESS
T ss_pred CcEEEECCCHHH-----HHHHHHHHhCCCCEEEEeCC
Confidence 467777532223 45677788899999998643
No 312
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=35.10 E-value=47 Score=19.15 Aligned_cols=12 Identities=25% Similarity=0.091 Sum_probs=7.7
Q ss_pred CccEEEeCCCcc
Q 040997 107 KIDCFIADGNMG 118 (128)
Q Consensus 107 ~~d~vI~D~~~~ 118 (128)
+||+||.|..++
T Consensus 47 ~~dlvi~D~~l~ 58 (138)
T 3c3m_A 47 PPDLVLLDIMME 58 (138)
T ss_dssp CCSEEEEESCCS
T ss_pred CCCEEEEeCCCC
Confidence 567777776543
No 313
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=35.09 E-value=32 Score=22.82 Aligned_cols=20 Identities=20% Similarity=0.373 Sum_probs=16.4
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..+|++|+++|++|.++.-.
T Consensus 23 ~~ia~~l~~~G~~V~~~~r~ 42 (266)
T 3oig_A 23 WGIARSLHEAGARLIFTYAG 42 (266)
T ss_dssp HHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHCCCEEEEecCc
Confidence 57899999999999877543
No 314
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=35.05 E-value=35 Score=22.54 Aligned_cols=20 Identities=10% Similarity=0.079 Sum_probs=16.7
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|+++.-.
T Consensus 28 ~~la~~l~~~G~~V~~~~r~ 47 (266)
T 1xq1_A 28 HAIVEEFAGFGAVIHTCARN 47 (266)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999887654
No 315
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=35.03 E-value=35 Score=22.61 Aligned_cols=33 Identities=24% Similarity=0.425 Sum_probs=21.7
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.- +.|-+ =..++++|+++|++|.++.-.
T Consensus 8 k~vlVTG-as~gI--G~~ia~~l~~~G~~V~~~~r~ 40 (263)
T 3ai3_A 8 KVAVITG-SSSGI--GLAIAEGFAKEGAHIVLVARQ 40 (263)
T ss_dssp CEEEEES-CSSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC-CCchH--HHHHHHHHHHCCCEEEEEcCC
Confidence 4455553 33323 257899999999999887543
No 316
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=35.01 E-value=32 Score=22.71 Aligned_cols=19 Identities=32% Similarity=0.482 Sum_probs=15.8
Q ss_pred HHHHHHHHHCCCeEEEEeC
Q 040997 21 LEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t 39 (128)
..++++|+++|++|.++.-
T Consensus 20 ~~ia~~l~~~G~~V~~~~r 38 (253)
T 1hxh_A 20 LEVVKLLLGEGAKVAFSDI 38 (253)
T ss_dssp HHHHHHHHHTTCEEEEECS
T ss_pred HHHHHHHHHCCCEEEEEeC
Confidence 5789999999999887654
No 317
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=35.00 E-value=73 Score=23.70 Aligned_cols=31 Identities=16% Similarity=0.324 Sum_probs=25.3
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEe
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~ 38 (128)
.||.|+-..+.| |-.+|+.|.++|++|+..=
T Consensus 23 ~~v~viGiG~sG----~s~~A~~l~~~G~~V~~~D 53 (494)
T 4hv4_A 23 RHIHFVGIGGAG----MGGIAEVLANEGYQISGSD 53 (494)
T ss_dssp CEEEEETTTSTT----HHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEEEEcHhh----HHHHHHHHHhCCCeEEEEE
Confidence 488899888777 3357999999999999863
No 318
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=34.99 E-value=35 Score=22.59 Aligned_cols=20 Identities=20% Similarity=0.343 Sum_probs=16.6
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|+++.-.
T Consensus 21 ~~ia~~l~~~G~~V~~~~r~ 40 (260)
T 2z1n_A 21 FASALELARNGARLLLFSRN 40 (260)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999887543
No 319
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=34.95 E-value=56 Score=21.05 Aligned_cols=36 Identities=19% Similarity=0.289 Sum_probs=28.3
Q ss_pred EEEEc-CCCcCChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 6 VLVMP-GPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 6 vl~~p-~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
|.+.. -+|.|=-.=...||..|+++|.+|-++-...
T Consensus 5 i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (237)
T 1g3q_A 5 ISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp EEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred EEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 33433 4566889999999999999999999986643
No 320
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=34.94 E-value=26 Score=22.66 Aligned_cols=19 Identities=21% Similarity=0.385 Sum_probs=16.1
Q ss_pred HHHHHHHHHCCCeEEEEeC
Q 040997 21 LEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t 39 (128)
..++++|+++|++|.++.-
T Consensus 16 ~~la~~l~~~G~~V~~~~r 34 (242)
T 1uay_A 16 RAAALALKARGYRVVVLDL 34 (242)
T ss_dssp HHHHHHHHHHTCEEEEEES
T ss_pred HHHHHHHHHCCCEEEEEcc
Confidence 5789999999999988754
No 321
>3p0j_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, tyrrs, pseudod translation, ATP-binding, nucleotide-binding, ligase; HET: TYE; 2.89A {Leishmania major} PDB: 3p0i_A* 3p0h_A*
Probab=34.90 E-value=45 Score=26.36 Aligned_cols=39 Identities=18% Similarity=0.175 Sum_probs=29.1
Q ss_pred CeEEEEcCCCc---CChHHHHH-HHHHHHH-CCCeEEEEeCcch
Q 040997 4 PHVLVMPGPAQ---GHVIPLLE-FSQCLAK-HGFRVTFVNTDYY 42 (128)
Q Consensus 4 ~hvl~~p~p~~---GH~~P~l~-la~~L~~-rG~~Vt~~~t~~~ 42 (128)
.||+..|..+. ||..|++. +.+.+.. -||+|+|+.+...
T Consensus 383 l~~~~~ps~g~lHLGh~v~~~k~l~~~~~~~~g~~v~ilIaD~~ 426 (690)
T 3p0j_A 383 HACMWMPALLKVPLDVAEGMIKVTKDFIAAHPEGTVTLVLPDWS 426 (690)
T ss_dssp EEEEECCCCSSCBHHHHHHHHHHHHHHHHHCSSCEEEEEECTTH
T ss_pred ceEEecCCCCCcccchHHHHHHHHHHHHHHcCCCeEEEEEecch
Confidence 37888886664 88888888 6655543 4899999988754
No 322
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=34.90 E-value=33 Score=24.45 Aligned_cols=34 Identities=21% Similarity=0.341 Sum_probs=23.5
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCe-EEEEeC
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFR-VTFVNT 39 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~-Vt~~~t 39 (128)
|.+..|+++-....| +.+|..|+++|++ |+++--
T Consensus 2 ~~~~dVvIVGaG~aG-----l~~A~~L~~~G~~~v~v~E~ 36 (410)
T 3c96_A 2 SEPIDILIAGAGIGG-----LSCALALHQAGIGKVTLLES 36 (410)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCSEEEEEES
T ss_pred CCCCeEEEECCCHHH-----HHHHHHHHhCCCCeEEEEEC
Confidence 345577777644334 5678889999999 999853
No 323
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=34.90 E-value=36 Score=22.59 Aligned_cols=33 Identities=18% Similarity=0.302 Sum_probs=21.5
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.- +.|-+- ..++++|+++|++|+++.-.
T Consensus 13 k~vlVTG-as~gIG--~~ia~~l~~~G~~V~~~~r~ 45 (263)
T 3ak4_A 13 RKAIVTG-GSKGIG--AAIARALDKAGATVAIADLD 45 (263)
T ss_dssp CEEEEET-TTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeC-CCChHH--HHHHHHHHHCCCEEEEEeCC
Confidence 3445552 334332 47899999999999887543
No 324
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=34.86 E-value=28 Score=25.76 Aligned_cols=35 Identities=20% Similarity=0.381 Sum_probs=23.9
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
|+...|++|-....| +..|..|+++|++|+++--.
T Consensus 1 M~~~DVvIIGgGi~G-----~~~A~~La~~G~~V~llE~~ 35 (501)
T 2qcu_A 1 METKDLIVIGGGING-----AGIAADAAGRGLSVLMLEAQ 35 (501)
T ss_dssp --CBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CCcCCEEEECcCHHH-----HHHHHHHHhCCCCEEEEECC
Confidence 555677777644334 56788899999999998543
No 325
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=34.82 E-value=36 Score=22.53 Aligned_cols=20 Identities=20% Similarity=0.323 Sum_probs=16.4
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|.++.-.
T Consensus 20 ~~ia~~l~~~G~~V~~~~r~ 39 (256)
T 2d1y_A 20 RAIAQAFAREGALVALCDLR 39 (256)
T ss_dssp HHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 47899999999999887543
No 326
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=34.78 E-value=42 Score=18.56 Aligned_cols=12 Identities=25% Similarity=0.158 Sum_probs=8.0
Q ss_pred CccEEEeCCCcc
Q 040997 107 KIDCFIADGNMG 118 (128)
Q Consensus 107 ~~d~vI~D~~~~ 118 (128)
+||+||.|..++
T Consensus 45 ~~dlvl~D~~l~ 56 (120)
T 2a9o_A 45 QPDIIILDLMLP 56 (120)
T ss_dssp CCSEEEECSSCS
T ss_pred CCCEEEEeccCC
Confidence 577777776553
No 327
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=34.77 E-value=48 Score=19.26 Aligned_cols=13 Identities=15% Similarity=0.238 Sum_probs=8.8
Q ss_pred CCccEEEeCCCcc
Q 040997 106 EKIDCFIADGNMG 118 (128)
Q Consensus 106 ~~~d~vI~D~~~~ 118 (128)
.+||+||.|.-++
T Consensus 48 ~~~dlvllD~~lp 60 (141)
T 3cu5_A 48 HPPNVLLTDVRMP 60 (141)
T ss_dssp SCCSEEEEESCCS
T ss_pred CCCCEEEEeCCCC
Confidence 3678888876553
No 328
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=34.76 E-value=32 Score=23.32 Aligned_cols=25 Identities=16% Similarity=0.103 Sum_probs=18.7
Q ss_pred CcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 13 AQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 13 ~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
+.|-+- ..|+++|+++|++|+.+.-
T Consensus 20 atG~iG--~~l~~~L~~~G~~V~~~~r 44 (321)
T 2pk3_A 20 VAGFVG--KYLANHLTEQNVEVFGTSR 44 (321)
T ss_dssp TTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCChHH--HHHHHHHHHCCCEEEEEec
Confidence 445443 4688999999999998754
No 329
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=34.70 E-value=32 Score=23.02 Aligned_cols=32 Identities=22% Similarity=0.333 Sum_probs=22.1
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
++++|.-.+.| + =..+|++|+++|++|.++.-
T Consensus 11 k~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~~ 42 (287)
T 3pxx_A 11 KVVLVTGGARG-Q--GRSHAVKLAEEGADIILFDI 42 (287)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCCCCh-H--HHHHHHHHHHCCCeEEEEcc
Confidence 55666644332 2 25789999999999988753
No 330
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=34.70 E-value=36 Score=22.40 Aligned_cols=20 Identities=20% Similarity=0.210 Sum_probs=16.4
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|.++.-.
T Consensus 21 ~aia~~l~~~G~~V~~~~r~ 40 (247)
T 2jah_A 21 EATARALAAEGAAVAIAARR 40 (247)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEECC
Confidence 57889999999999887543
No 331
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=34.68 E-value=33 Score=22.68 Aligned_cols=33 Identities=15% Similarity=0.305 Sum_probs=22.2
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.-.+ |-+ =..++++|+++|++|.++.-.
T Consensus 13 k~vlVTGas-~gI--G~aia~~l~~~G~~V~~~~r~ 45 (252)
T 3f1l_A 13 RIILVTGAS-DGI--GREAAMTYARYGATVILLGRN 45 (252)
T ss_dssp CEEEEESTT-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-ChH--HHHHHHHHHHCCCEEEEEeCC
Confidence 456666333 322 257899999999998887543
No 332
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A*
Probab=34.65 E-value=56 Score=23.34 Aligned_cols=35 Identities=14% Similarity=0.321 Sum_probs=26.3
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHH-CCCeEEEEeCcc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAK-HGFRVTFVNTDY 41 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~-rG~~Vt~~~t~~ 41 (128)
+++++. .|.| +.|++.+.+.|.. .+.+|+++-...
T Consensus 268 ~~vlIa-gGtG-itP~~s~l~~l~~~~~~~v~l~~~~r 303 (403)
T 1cqx_A 268 PIVLIS-GGVG-LTPMVSMLKVALQAPPRQVVFVHGAR 303 (403)
T ss_dssp CEEEEE-SSCC-HHHHHHHHHHHTCSSCCCEEEEEEES
T ss_pred CEEEEE-eccc-HhhHHHHHHHHHhCCCCcEEEEEEeC
Confidence 567776 4555 9999999999987 567788875543
No 333
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=34.63 E-value=33 Score=22.64 Aligned_cols=33 Identities=21% Similarity=0.292 Sum_probs=22.7
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.-.+. -+ =..+|++|+++|++|.++.-.
T Consensus 10 k~~lVTGas~-gI--G~a~a~~l~~~G~~V~~~~r~ 42 (248)
T 3op4_A 10 KVALVTGASR-GI--GKAIAELLAERGAKVIGTATS 42 (248)
T ss_dssp CEEEESSCSS-HH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCC-HH--HHHHHHHHHHCCCEEEEEeCC
Confidence 5666664433 22 257899999999999876543
No 334
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=34.61 E-value=36 Score=22.54 Aligned_cols=33 Identities=15% Similarity=0.116 Sum_probs=21.4
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.-. .|-+ =..++++|+++|++|.++.-.
T Consensus 10 k~vlVTGa-s~gi--G~~ia~~l~~~G~~V~~~~r~ 42 (260)
T 2ae2_A 10 CTALVTGG-SRGI--GYGIVEELASLGASVYTCSRN 42 (260)
T ss_dssp CEEEEESC-SSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECC-CcHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 44555533 3322 247899999999999887543
No 335
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=34.60 E-value=38 Score=19.59 Aligned_cols=13 Identities=15% Similarity=0.156 Sum_probs=8.7
Q ss_pred CCccEEEeCCCcc
Q 040997 106 EKIDCFIADGNMG 118 (128)
Q Consensus 106 ~~~d~vI~D~~~~ 118 (128)
.+||+||.|..++
T Consensus 47 ~~~dlvllD~~l~ 59 (136)
T 2qzj_A 47 NKYDLIFLEIILS 59 (136)
T ss_dssp CCCSEEEEESEET
T ss_pred cCCCEEEEeCCCC
Confidence 3678888776553
No 336
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=34.60 E-value=32 Score=25.51 Aligned_cols=35 Identities=14% Similarity=0.176 Sum_probs=24.7
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
|.+.+|.++-. |.+- ..+|+.|+++|++|+++...
T Consensus 3 m~~~~IgvIG~---G~mG--~~lA~~L~~~G~~V~v~dr~ 37 (474)
T 2iz1_A 3 MAQANFGVVGM---AVMG--KNLALNVESRGYTVAIYNRT 37 (474)
T ss_dssp CTTBSEEEECC---SHHH--HHHHHHHHHTTCCEEEECSS
T ss_pred CCCCcEEEEee---HHHH--HHHHHHHHhCCCEEEEEcCC
Confidence 55667887754 4443 34788899999999887543
No 337
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=34.56 E-value=64 Score=23.88 Aligned_cols=38 Identities=8% Similarity=0.074 Sum_probs=27.7
Q ss_pred CCeEEEEcCCCcCC--hHHHHHHHHH--HHHCCCeEEEEeCc
Q 040997 3 SPHVLVMPGPAQGH--VIPLLEFSQC--LAKHGFRVTFVNTD 40 (128)
Q Consensus 3 ~~hvl~~p~p~~GH--~~P~l~la~~--L~~rG~~Vt~~~t~ 40 (128)
+.+|+++.....+| -.-+..|++. |..+|++|++++..
T Consensus 205 ~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~ 246 (568)
T 2vsy_A 205 PLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATS 246 (568)
T ss_dssp CEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESS
T ss_pred CeEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECC
Confidence 35788887554444 3457788999 67789999999864
No 338
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=34.55 E-value=12 Score=25.83 Aligned_cols=17 Identities=18% Similarity=0.303 Sum_probs=14.4
Q ss_pred cCChHHHHHHHHHHHHC
Q 040997 14 QGHVIPLLEFSQCLAKH 30 (128)
Q Consensus 14 ~GH~~P~l~la~~L~~r 30 (128)
.||+||.+-|+-.+..+
T Consensus 74 GaHlNPAVTla~~~~g~ 90 (271)
T 1j4n_A 74 GAHLNPAVTLGLLLSCQ 90 (271)
T ss_dssp CCCCCHHHHHHHHHTTS
T ss_pred cceEcHHHHHHHHHcCC
Confidence 38999999999888754
No 339
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=34.53 E-value=36 Score=22.64 Aligned_cols=33 Identities=15% Similarity=0.269 Sum_probs=22.0
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
+.++|...+ |-+ =..++++|+++|++|.++...
T Consensus 27 k~vlVTGas-~gI--G~~la~~l~~~G~~v~i~~~r 59 (267)
T 4iiu_A 27 RSVLVTGAS-KGI--GRAIARQLAADGFNIGVHYHR 59 (267)
T ss_dssp CEEEETTTT-SHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCC-ChH--HHHHHHHHHHCCCEEEEEeCC
Confidence 455555333 323 258899999999999776543
No 340
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=34.38 E-value=34 Score=22.61 Aligned_cols=33 Identities=24% Similarity=0.359 Sum_probs=21.7
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.-.+ |-+ =..++++|+++|++|.++.-.
T Consensus 10 k~vlITGas-~gI--G~~~a~~l~~~G~~V~~~~r~ 42 (261)
T 3n74_A 10 KVALITGAG-SGF--GEGMAKRFAKGGAKVVIVDRD 42 (261)
T ss_dssp CEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-chH--HHHHHHHHHHCCCEEEEEcCC
Confidence 455555333 222 257899999999998887543
No 341
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=34.36 E-value=80 Score=19.28 Aligned_cols=35 Identities=26% Similarity=0.371 Sum_probs=24.2
Q ss_pred EEcCCCcCCh--HHHHHHHHHHHHCCCeE-EEEeCcch
Q 040997 8 VMPGPAQGHV--IPLLEFSQCLAKHGFRV-TFVNTDYY 42 (128)
Q Consensus 8 ~~p~p~~GH~--~P~l~la~~L~~rG~~V-t~~~t~~~ 42 (128)
++.-|..|+- .-.+++|+.+.+.||+| +++-..+-
T Consensus 18 vv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~DG 55 (140)
T 2d1p_A 18 VVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYREG 55 (140)
T ss_dssp EECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECGGG
T ss_pred EEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEechH
Confidence 3344444554 56689999999999999 77655443
No 342
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=34.31 E-value=51 Score=18.89 Aligned_cols=11 Identities=36% Similarity=0.277 Sum_probs=7.2
Q ss_pred CccEEEeCCCc
Q 040997 107 KIDCFIADGNM 117 (128)
Q Consensus 107 ~~d~vI~D~~~ 117 (128)
+||+||.|...
T Consensus 54 ~~dlii~d~~l 64 (143)
T 3cnb_A 54 KPDVVMLDLMM 64 (143)
T ss_dssp CCSEEEEETTC
T ss_pred CCCEEEEeccc
Confidence 56777777654
No 343
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=34.30 E-value=34 Score=22.36 Aligned_cols=32 Identities=16% Similarity=0.182 Sum_probs=21.2
Q ss_pred EEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 6 VLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 6 vl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
.++|. .+.|-+- ..++++|+++|++|+++.-.
T Consensus 13 ~vlVt-GasggiG--~~la~~l~~~G~~V~~~~r~ 44 (255)
T 1fmc_A 13 CAIIT-GAGAGIG--KEIAITFATAGASVVVSDIN 44 (255)
T ss_dssp EEEET-TTTSHHH--HHHHHHHHTTTCEEEEEESC
T ss_pred EEEEE-CCccHHH--HHHHHHHHHCCCEEEEEcCC
Confidence 44444 2334332 57899999999999887544
No 344
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=34.25 E-value=68 Score=21.80 Aligned_cols=35 Identities=20% Similarity=0.170 Sum_probs=28.4
Q ss_pred EEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 6 VLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 6 vl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
|.+..-+|.|=-.-...||..|+++|.+|-++=..
T Consensus 44 I~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D 78 (307)
T 3end_A 44 FAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCD 78 (307)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred EEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 44555666788899999999999999999887544
No 345
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=34.21 E-value=33 Score=23.54 Aligned_cols=25 Identities=20% Similarity=0.185 Sum_probs=18.2
Q ss_pred CcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 13 AQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 13 ~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
+.|-+- .+|+++|+++|++|+.+.-
T Consensus 13 atGfIG--~~l~~~L~~~G~~V~~~~r 37 (337)
T 2c29_D 13 ASGFIG--SWLVMRLLERGYTVRATVR 37 (337)
T ss_dssp TTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CchHHH--HHHHHHHHHCCCEEEEEEC
Confidence 445443 4688999999999987653
No 346
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=34.20 E-value=37 Score=22.42 Aligned_cols=20 Identities=25% Similarity=0.409 Sum_probs=16.5
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|.++.-.
T Consensus 16 ~~ia~~l~~~G~~V~~~~r~ 35 (256)
T 1geg_A 16 KAIALRLVKDGFAVAIADYN 35 (256)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999887543
No 347
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=34.20 E-value=58 Score=24.07 Aligned_cols=38 Identities=18% Similarity=0.401 Sum_probs=31.6
Q ss_pred EEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchh
Q 040997 6 VLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYH 43 (128)
Q Consensus 6 vl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~ 43 (128)
|+++-.+|.|=-.-+..||..|..+|.+|.++....+.
T Consensus 100 I~lvG~~GsGKTTt~~kLA~~l~~~G~kVllv~~D~~r 137 (433)
T 3kl4_A 100 IMLVGVQGSGKTTTAGKLAYFYKKRGYKVGLVAADVYR 137 (433)
T ss_dssp EEECCCTTSCHHHHHHHHHHHHHHTTCCEEEEEECCSC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEecCccc
Confidence 45555777899999999999999999999998876543
No 348
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=34.19 E-value=41 Score=19.47 Aligned_cols=12 Identities=25% Similarity=0.171 Sum_probs=7.5
Q ss_pred CccEEEeCCCcc
Q 040997 107 KIDCFIADGNMG 118 (128)
Q Consensus 107 ~~d~vI~D~~~~ 118 (128)
+||+||.|..++
T Consensus 48 ~~dlvllD~~l~ 59 (137)
T 3cfy_A 48 KPQLIILDLKLP 59 (137)
T ss_dssp CCSEEEECSBCS
T ss_pred CCCEEEEecCCC
Confidence 567777776543
No 349
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=34.16 E-value=37 Score=22.43 Aligned_cols=31 Identities=16% Similarity=0.051 Sum_probs=21.0
Q ss_pred EEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 6 VLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 6 vl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
.++|. .+.|-+ =..++++|+++|++|+++.-
T Consensus 23 ~vlIt-Gasggi--G~~la~~l~~~G~~v~~~~r 53 (274)
T 1ja9_A 23 VALTT-GAGRGI--GRGIAIELGRRGASVVVNYG 53 (274)
T ss_dssp EEEET-TTTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred EEEEe-CCCchH--HHHHHHHHHHCCCEEEEEcC
Confidence 44444 233433 25788999999999988764
No 350
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=34.15 E-value=51 Score=21.70 Aligned_cols=36 Identities=8% Similarity=0.157 Sum_probs=21.8
Q ss_pred eEEEEcCCCcCCh--HHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHV--IPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~--~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
-++++.-.+.||- .-+..+++.|+++|+.|-.+-..
T Consensus 57 p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~r 94 (259)
T 4ao6_A 57 RLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGP 94 (259)
T ss_dssp EEEEEEC--------CHHHHHHHHHHHTTEEEEEECCC
T ss_pred CEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccC
Confidence 3555655555663 24678999999999988776544
No 351
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=34.10 E-value=34 Score=23.17 Aligned_cols=32 Identities=25% Similarity=0.419 Sum_probs=21.7
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
++++|...+.| + =..+|++|+++|++|.++.-
T Consensus 26 k~~lVTGas~G-I--G~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 26 KTAVITGSTSG-I--GLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp CEEEEETCSSH-H--HHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEeCCCcH-H--HHHHHHHHHHCCCEEEEEeC
Confidence 45555543332 2 25789999999999987754
No 352
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=34.05 E-value=34 Score=22.83 Aligned_cols=32 Identities=16% Similarity=0.309 Sum_probs=21.6
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
++++|.-.+ |-+- ..++++|+++|++|.++.-
T Consensus 29 k~vlVTGas-~gIG--~aia~~l~~~G~~V~~~~r 60 (260)
T 3un1_A 29 KVVVITGAS-QGIG--AGLVRAYRDRNYRVVATSR 60 (260)
T ss_dssp CEEEESSCS-SHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-CHHH--HHHHHHHHHCCCEEEEEeC
Confidence 455565333 3222 4789999999999988754
No 353
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=34.04 E-value=1.1e+02 Score=20.60 Aligned_cols=32 Identities=19% Similarity=0.322 Sum_probs=22.1
Q ss_pred EEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 6 VLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 6 vl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
.++|.-.+.| ==..+|++|++.|.+|.+.-..
T Consensus 4 ~vlVTGas~G---IG~aia~~la~~Ga~V~~~~~~ 35 (247)
T 3ged_A 4 GVIVTGGGHG---IGKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp EEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEecCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 4556645543 1257889999999999887544
No 354
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=34.03 E-value=31 Score=23.12 Aligned_cols=33 Identities=27% Similarity=0.387 Sum_probs=21.8
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.-.+. -+ =..++++|+++|++|.++.-.
T Consensus 28 k~vlVTGas~-gI--G~aia~~l~~~G~~V~~~~r~ 60 (260)
T 3gem_A 28 APILITGASQ-RV--GLHCALRLLEHGHRVIISYRT 60 (260)
T ss_dssp CCEEESSTTS-HH--HHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCC-HH--HHHHHHHHHHCCCEEEEEeCC
Confidence 3455553332 22 257899999999999887544
No 355
>3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metall peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis}
Probab=34.01 E-value=31 Score=20.62 Aligned_cols=34 Identities=21% Similarity=0.290 Sum_probs=24.6
Q ss_pred CChHHHHHHHHHHHHCCCeEEEEeCcchhhhhhh
Q 040997 15 GHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVE 48 (128)
Q Consensus 15 GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~~~ 48 (128)
||++=+-.|-+.|..+|.+.-+++.+.+..-+..
T Consensus 1 ~~m~Rl~~l~~~m~~~glDa~li~~~~ni~YlTG 34 (140)
T 3i7m_A 1 GHMTKLEQIQQWTAQHHASMTYLSNPKTIEYLTG 34 (140)
T ss_dssp ---CHHHHHHHHHHHTTCSEEEECCHHHHHHHHC
T ss_pred CcchHHHHHHHHHHHcCCCEEEECCCCcceeecC
Confidence 6777666777889999999999998888655433
No 356
>1yrb_A ATP(GTP)binding protein; GTPase, P-loop, rossman fold, GDP, HYDR; HET: GDP; 1.75A {Pyrococcus abyssi} SCOP: c.37.1.10 PDB: 1yr6_A* 1yr8_A* 1yr9_A* 1yra_A* 1yr7_A* 2oxr_A*
Probab=34.00 E-value=81 Score=20.62 Aligned_cols=37 Identities=24% Similarity=0.376 Sum_probs=31.3
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
..+++...+|.|=-.=+..|+..|+ +|.+|.++....
T Consensus 15 ~i~~~~GkgGvGKTTl~~~La~~l~-~g~~v~vvd~D~ 51 (262)
T 1yrb_A 15 MIVVFVGTAGSGKTTLTGEFGRYLE-DNYKVAYVNLDT 51 (262)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHT-TTSCEEEEECCS
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHH-CCCeEEEEeCCC
Confidence 3467777888999999999999999 999999987553
No 357
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=33.99 E-value=37 Score=22.97 Aligned_cols=33 Identities=21% Similarity=0.266 Sum_probs=22.0
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.... |=+- ..++++|+++|++|.++.-.
T Consensus 17 k~vlVTGas-~gIG--~~~a~~L~~~G~~V~~~~r~ 49 (291)
T 3rd5_A 17 RTVVITGAN-SGLG--AVTARELARRGATVIMAVRD 49 (291)
T ss_dssp CEEEEECCS-SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCC-ChHH--HHHHHHHHHCCCEEEEEECC
Confidence 455555333 3222 68899999999998887543
No 358
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=33.99 E-value=37 Score=22.67 Aligned_cols=33 Identities=18% Similarity=0.295 Sum_probs=21.9
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|... .|-+ =..++++|+++|++|+++.-.
T Consensus 7 k~vlVTGa-s~gI--G~~ia~~l~~~G~~V~~~~r~ 39 (278)
T 1spx_A 7 KVAIITGS-SNGI--GRATAVLFAREGAKVTITGRH 39 (278)
T ss_dssp CEEEETTT-TSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCC-CchH--HHHHHHHHHHCCCEEEEEeCC
Confidence 45556533 3322 247899999999999887543
No 359
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=33.96 E-value=38 Score=22.28 Aligned_cols=32 Identities=13% Similarity=0.075 Sum_probs=21.8
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
+.++|. .+.|-+ =..++++|+++|++|+++.-
T Consensus 8 k~vlIT-Gasggi--G~~~a~~l~~~G~~V~~~~r 39 (261)
T 1gee_A 8 KVVVIT-GSSTGL--GKSMAIRFATEKAKVVVNYR 39 (261)
T ss_dssp CEEEET-TCSSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEe-CCCChH--HHHHHHHHHHCCCEEEEEcC
Confidence 344555 233433 26789999999999988765
No 360
>3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B*
Probab=33.96 E-value=37 Score=19.78 Aligned_cols=23 Identities=13% Similarity=0.385 Sum_probs=15.3
Q ss_pred HHHHHHHhcCCCCCccEEEeCCCcc
Q 040997 94 EKLIEEINSREDEKIDCFIADGNMG 118 (128)
Q Consensus 94 ~~ll~~l~~~~~~~~d~vI~D~~~~ 118 (128)
++.++.+.+. .+||+||.|..++
T Consensus 49 ~~al~~l~~~--~~~dlvilD~~l~ 71 (145)
T 3kyj_B 49 QEALDKLAAQ--PNVDLILLDIEMP 71 (145)
T ss_dssp HHHHHHHHHC--TTCCEEEECTTSC
T ss_pred HHHHHHHhcC--CCCCEEEEeCCCC
Confidence 4555555441 2799999998664
No 361
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=33.92 E-value=63 Score=21.35 Aligned_cols=35 Identities=17% Similarity=0.192 Sum_probs=27.9
Q ss_pred EEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 6 VLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 6 vl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
|.+..-+|.|=-.-...||..|+.+|.+|-++=..
T Consensus 4 I~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D 38 (269)
T 1cp2_A 4 VAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred EEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 44445667799999999999999999999886433
No 362
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=33.89 E-value=43 Score=19.21 Aligned_cols=12 Identities=25% Similarity=0.199 Sum_probs=8.4
Q ss_pred CccEEEeCCCcc
Q 040997 107 KIDCFIADGNMG 118 (128)
Q Consensus 107 ~~d~vI~D~~~~ 118 (128)
+||+||.|..++
T Consensus 49 ~~dlvilD~~lp 60 (133)
T 3b2n_A 49 NPNVVILDIEMP 60 (133)
T ss_dssp CCSEEEECSSCS
T ss_pred CCCEEEEecCCC
Confidence 578888887553
No 363
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=33.87 E-value=37 Score=22.87 Aligned_cols=33 Identities=12% Similarity=0.243 Sum_probs=21.9
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|...+ |-+- ..++++|+++|++|+++.-.
T Consensus 22 k~vlVTGas-~gIG--~aia~~La~~G~~V~~~~r~ 54 (272)
T 2nwq_A 22 STLFITGAT-SGFG--EACARRFAEAGWSLVLTGRR 54 (272)
T ss_dssp CEEEESSTT-TSSH--HHHHHHHHHTTCEEEEEESC
T ss_pred cEEEEeCCC-CHHH--HHHHHHHHHCCCEEEEEECC
Confidence 345555333 3332 47899999999999887543
No 364
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=33.85 E-value=34 Score=23.43 Aligned_cols=32 Identities=13% Similarity=0.220 Sum_probs=22.4
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
+|++.- +.|-+- ..|+++|+++|++|+.+.-.
T Consensus 15 ~ilVtG--atG~iG--~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 15 KYAVLG--ATGLLG--HHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp EEEEES--TTSHHH--HHHHHHHHHTTCEEEEEECT
T ss_pred EEEEEC--CCcHHH--HHHHHHHHHCCCEEEEEecC
Confidence 566654 444443 46789999999999988654
No 365
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=33.85 E-value=30 Score=24.06 Aligned_cols=19 Identities=11% Similarity=0.202 Sum_probs=15.8
Q ss_pred HHHHHHHHHCCCeEEEEeC
Q 040997 21 LEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t 39 (128)
+..|..|+++|++|+++--
T Consensus 15 l~~A~~La~~G~~V~vle~ 33 (372)
T 2uzz_A 15 AAAGYYATRAGLNVLMTDA 33 (372)
T ss_dssp HHHHHHHHHTTCCEEEECS
T ss_pred HHHHHHHHHCCCeEEEEec
Confidence 5678889999999999854
No 366
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=33.84 E-value=35 Score=22.80 Aligned_cols=33 Identities=18% Similarity=0.359 Sum_probs=22.9
Q ss_pred eEEEEcCCCc--CChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQ--GHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~--GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.-.+. | | =..+|++|+++|++|.+..-.
T Consensus 7 K~alVTGaa~~~G-I--G~aiA~~la~~Ga~Vvi~~r~ 41 (256)
T 4fs3_A 7 KTYVIMGIANKRS-I--AFGVAKVLDQLGAKLVFTYRK 41 (256)
T ss_dssp CEEEEECCCSTTC-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCCCch-H--HHHHHHHHHHCCCEEEEEECC
Confidence 5667765322 2 1 267899999999999886543
No 367
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=33.82 E-value=40 Score=18.71 Aligned_cols=11 Identities=36% Similarity=0.244 Sum_probs=6.8
Q ss_pred CccEEEeCCCc
Q 040997 107 KIDCFIADGNM 117 (128)
Q Consensus 107 ~~d~vI~D~~~ 117 (128)
+||+||.|..+
T Consensus 47 ~~dlil~D~~l 57 (120)
T 1tmy_A 47 KPDIVTMDITM 57 (120)
T ss_dssp CCSEEEEECSC
T ss_pred CCCEEEEeCCC
Confidence 46666666654
No 368
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=33.81 E-value=35 Score=22.12 Aligned_cols=18 Identities=22% Similarity=0.233 Sum_probs=15.4
Q ss_pred HHHHHHHHHCCCeEEEEe
Q 040997 21 LEFSQCLAKHGFRVTFVN 38 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~ 38 (128)
..++++|+++|++|.++.
T Consensus 15 ~~la~~l~~~G~~v~~~~ 32 (244)
T 1edo_A 15 KAIALSLGKAGCKVLVNY 32 (244)
T ss_dssp HHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHCCCEEEEEc
Confidence 578999999999998853
No 369
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=33.79 E-value=38 Score=22.37 Aligned_cols=20 Identities=10% Similarity=0.160 Sum_probs=16.4
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|.++.-.
T Consensus 14 ~aia~~l~~~G~~V~~~~r~ 33 (248)
T 3asu_A 14 ECITRRFIQQGHKVIATGRR 33 (248)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999887543
No 370
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=33.78 E-value=75 Score=22.19 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=22.8
Q ss_pred EEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 6 VLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 6 vl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
|++-|..+.| .-.-++.+.|.++|+++.+..|.
T Consensus 34 vi~Np~sg~~--~~~~~i~~~l~~~g~~~~~~~t~ 66 (332)
T 2bon_A 34 LILNGKSTDN--LPLREAIMLLREEGMTIHVRVTW 66 (332)
T ss_dssp EEECSSSTTC--HHHHHHHHHHHTTTCCEEEEECC
T ss_pred EEECCCCCCC--chHHHHHHHHHHcCCcEEEEEec
Confidence 4444444445 44567888888999999988665
No 371
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=33.78 E-value=34 Score=22.92 Aligned_cols=33 Identities=18% Similarity=0.221 Sum_probs=22.2
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.....| + =..++++|+++|++|.++.-.
T Consensus 31 k~vlVTGas~G-I--G~aia~~l~~~G~~Vi~~~r~ 63 (281)
T 3ppi_A 31 ASAIVSGGAGG-L--GEATVRRLHADGLGVVIADLA 63 (281)
T ss_dssp EEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCCh-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 45566644433 2 257899999999998876543
No 372
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=33.77 E-value=61 Score=22.97 Aligned_cols=36 Identities=8% Similarity=0.093 Sum_probs=25.6
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
|...+|+++..... -+.+++.+.+.|++|.++..+.
T Consensus 5 ~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~~ 40 (403)
T 4dim_A 5 YDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMPN 40 (403)
T ss_dssp -CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECSS
T ss_pred cCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCCC
Confidence 35568888764332 4668899999999999986543
No 373
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=33.77 E-value=65 Score=18.05 Aligned_cols=38 Identities=21% Similarity=0.281 Sum_probs=26.4
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcch
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYY 42 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~ 42 (128)
|.+.+|+++- .+-.-.-.+.+.|...|++|+.+.+...
T Consensus 1 M~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~~~~~~ 38 (127)
T 3i42_A 1 MSLQQALIVE----DYQAAAETFKELLEMLGFQADYVMSGTD 38 (127)
T ss_dssp -CCEEEEEEC----SCHHHHHHHHHHHHHTTEEEEEESSHHH
T ss_pred CCcceEEEEc----CCHHHHHHHHHHHHHcCCCEEEECCHHH
Confidence 6667787775 4555566778888889998887665443
No 374
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=33.75 E-value=38 Score=22.78 Aligned_cols=33 Identities=15% Similarity=0.260 Sum_probs=22.0
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.-.+ |-+ =..++++|+++|++|+++.-.
T Consensus 7 k~vlVTGas-~gI--G~~ia~~l~~~G~~V~~~~r~ 39 (280)
T 1xkq_A 7 KTVIITGSS-NGI--GRTTAILFAQEGANVTITGRS 39 (280)
T ss_dssp CEEEETTCS-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-ChH--HHHHHHHHHHCCCEEEEEeCC
Confidence 455666333 322 246899999999999887543
No 375
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=33.75 E-value=57 Score=20.34 Aligned_cols=34 Identities=15% Similarity=0.185 Sum_probs=24.9
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
-|+++. ...|+-.-+..+++.|+++|+.|..+--
T Consensus 24 ~vv~~H-G~~~~~~~~~~~~~~l~~~G~~v~~~d~ 57 (251)
T 3dkr_A 24 GVVLLH-AYTGSPNDMNFMARALQRSGYGVYVPLF 57 (251)
T ss_dssp EEEEEC-CTTCCGGGGHHHHHHHHHTTCEEEECCC
T ss_pred eEEEeC-CCCCCHHHHHHHHHHHHHCCCEEEecCC
Confidence 455555 4456666778999999999999877643
No 376
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=33.72 E-value=37 Score=19.98 Aligned_cols=30 Identities=30% Similarity=0.311 Sum_probs=19.6
Q ss_pred HHHHHHHHhcCCCCCccEEEeCCCcc--cHHHHHH
Q 040997 93 LEKLIEEINSREDEKIDCFIADGNMG--WSLEVAK 125 (128)
Q Consensus 93 ~~~ll~~l~~~~~~~~d~vI~D~~~~--~~~~vA~ 125 (128)
.++.++.+.+ .+||+||.|.-++ -+.++.+
T Consensus 55 ~~~al~~l~~---~~~dlii~D~~l~~~~g~~~~~ 86 (150)
T 4e7p_A 55 GQEAIQLLEK---ESVDIAILDVEMPVKTGLEVLE 86 (150)
T ss_dssp HHHHHHHHTT---SCCSEEEECSSCSSSCHHHHHH
T ss_pred HHHHHHHhhc---cCCCEEEEeCCCCCCcHHHHHH
Confidence 3566666654 5799999998654 2444443
No 377
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=33.69 E-value=38 Score=22.44 Aligned_cols=20 Identities=10% Similarity=0.003 Sum_probs=16.5
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|.++.-.
T Consensus 37 ~~~a~~l~~~G~~V~~~~r~ 56 (266)
T 3o38_A 37 STTARRALLEGADVVISDYH 56 (266)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEecCC
Confidence 58899999999998877543
No 378
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=33.65 E-value=35 Score=22.61 Aligned_cols=33 Identities=21% Similarity=0.317 Sum_probs=22.2
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.-.+. -+ =..++++|+++|++|+++.-.
T Consensus 5 k~vlVTGas~-gI--G~~ia~~l~~~G~~V~~~~r~ 37 (260)
T 1x1t_A 5 KVAVVTGSTS-GI--GLGIATALAAQGADIVLNGFG 37 (260)
T ss_dssp CEEEETTCSS-HH--HHHHHHHHHHTTCEEEEECCS
T ss_pred CEEEEeCCCc-HH--HHHHHHHHHHcCCEEEEEeCC
Confidence 4556663333 22 357899999999999887543
No 379
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=33.63 E-value=38 Score=22.67 Aligned_cols=33 Identities=15% Similarity=0.094 Sum_probs=22.2
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.. +.|-+- ..++++|+++|++|..+.-.
T Consensus 6 k~vlVTG-as~gIG--~~~a~~l~~~G~~V~~~~r~ 38 (281)
T 3m1a_A 6 KVWLVTG-ASSGFG--RAIAEAAVAAGDTVIGTARR 38 (281)
T ss_dssp CEEEETT-TTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred cEEEEEC-CCChHH--HHHHHHHHHCCCEEEEEeCC
Confidence 5566663 333332 47899999999999876543
No 380
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=33.63 E-value=35 Score=22.69 Aligned_cols=31 Identities=16% Similarity=0.274 Sum_probs=21.5
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEe
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~ 38 (128)
++++|...+.| + =..++++|+++|++|.++.
T Consensus 9 k~vlVTGas~G-I--G~aia~~la~~G~~V~~~~ 39 (259)
T 3edm_A 9 RTIVVAGAGRD-I--GRACAIRFAQEGANVVLTY 39 (259)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCch-H--HHHHHHHHHHCCCEEEEEc
Confidence 45666644332 2 2578999999999998873
No 381
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=33.62 E-value=33 Score=23.83 Aligned_cols=31 Identities=26% Similarity=0.429 Sum_probs=22.9
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
..|++|-....| +..|.+|+++|++|+++--
T Consensus 7 ~dVvVIG~Gi~G-----ls~A~~La~~G~~V~vle~ 37 (363)
T 1c0p_A 7 KRVVVLGSGVIG-----LSSALILARKGYSVHILAR 37 (363)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEECCCHHH-----HHHHHHHHhCCCEEEEEec
Confidence 467777644445 5678888999999999854
No 382
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=33.61 E-value=38 Score=22.61 Aligned_cols=19 Identities=11% Similarity=0.165 Sum_probs=15.9
Q ss_pred HHHHHHHHHCCCeEEEEeC
Q 040997 21 LEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t 39 (128)
..++++|+++|++|+++.-
T Consensus 22 ~~ia~~l~~~G~~V~~~~r 40 (264)
T 2dtx_A 22 RAIAERFVDEGSKVIDLSI 40 (264)
T ss_dssp HHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHCCCEEEEEec
Confidence 5789999999999988654
No 383
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=33.60 E-value=32 Score=24.01 Aligned_cols=38 Identities=16% Similarity=0.288 Sum_probs=27.6
Q ss_pred CCCCeEEEEcCCCcC--C---hHHHHHHHHHHHHCCCeEEEEeC
Q 040997 1 MSSPHVLVMPGPAQG--H---VIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 1 m~~~hvl~~p~p~~G--H---~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
|.+.+|+++. .|++ | +.....+++.|.+.|++|..+..
T Consensus 1 m~~~~v~vl~-gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~ 43 (343)
T 1e4e_A 1 MNRIKVAILF-GGCSEEHDVSVKSAIEIAANINKEKYEPLYIGI 43 (343)
T ss_dssp -CCEEEEEEE-ECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CCCcEEEEEe-CCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEE
Confidence 7777888887 3454 2 23677889999999999988754
No 384
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=33.58 E-value=33 Score=19.50 Aligned_cols=22 Identities=9% Similarity=-0.124 Sum_probs=14.4
Q ss_pred HHHHHHHhcCCCCCccEEEeCCCcc
Q 040997 94 EKLIEEINSREDEKIDCFIADGNMG 118 (128)
Q Consensus 94 ~~ll~~l~~~~~~~~d~vI~D~~~~ 118 (128)
++.++.+.+ .+||+||.|..++
T Consensus 40 ~~a~~~l~~---~~~dlii~d~~l~ 61 (132)
T 3lte_A 40 FDAGIKLST---FEPAIMTLDLSMP 61 (132)
T ss_dssp HHHHHHHHH---TCCSEEEEESCBT
T ss_pred HHHHHHHHh---cCCCEEEEecCCC
Confidence 344444443 4789999998764
No 385
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=33.57 E-value=35 Score=22.85 Aligned_cols=32 Identities=22% Similarity=0.200 Sum_probs=21.3
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
++++|.-.+. -+ =..++++|+++|++|.++.-
T Consensus 14 k~vlVTGas~-gI--G~~ia~~l~~~G~~V~~~~r 45 (278)
T 3sx2_A 14 KVAFITGAAR-GQ--GRAHAVRLAADGADIIAVDL 45 (278)
T ss_dssp CEEEEESTTS-HH--HHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCC-hH--HHHHHHHHHHCCCeEEEEec
Confidence 4555553332 22 25789999999999988753
No 386
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=33.57 E-value=55 Score=18.35 Aligned_cols=13 Identities=31% Similarity=0.235 Sum_probs=8.3
Q ss_pred CCccEEEeCCCcc
Q 040997 106 EKIDCFIADGNMG 118 (128)
Q Consensus 106 ~~~d~vI~D~~~~ 118 (128)
.+||+||.|..++
T Consensus 48 ~~~dlvi~D~~l~ 60 (128)
T 1jbe_A 48 GGYGFVISDWNMP 60 (128)
T ss_dssp CCCCEEEEESCCS
T ss_pred cCCCEEEEeCCCC
Confidence 3577777776553
No 387
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=33.56 E-value=52 Score=19.36 Aligned_cols=13 Identities=23% Similarity=0.307 Sum_probs=8.3
Q ss_pred CCccEEEeCCCcc
Q 040997 106 EKIDCFIADGNMG 118 (128)
Q Consensus 106 ~~~d~vI~D~~~~ 118 (128)
.+||+||.|..++
T Consensus 50 ~~~dlvi~d~~l~ 62 (154)
T 2rjn_A 50 TSVQLVISDMRMP 62 (154)
T ss_dssp SCCSEEEEESSCS
T ss_pred CCCCEEEEecCCC
Confidence 3577777776543
No 388
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=33.56 E-value=39 Score=22.47 Aligned_cols=33 Identities=21% Similarity=0.411 Sum_probs=21.7
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.-. .|-+ =..++++|+++|++|+++.-.
T Consensus 8 k~vlVTGa-s~gI--G~~ia~~l~~~G~~V~~~~r~ 40 (262)
T 1zem_A 8 KVCLVTGA-GGNI--GLATALRLAEEGTAIALLDMN 40 (262)
T ss_dssp CEEEEETT-TSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCC-CcHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 44555533 3322 257899999999999887543
No 389
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=33.54 E-value=29 Score=23.75 Aligned_cols=22 Identities=14% Similarity=0.229 Sum_probs=16.2
Q ss_pred HHHHHHHhcCCCCCccEEEeCCCcc
Q 040997 94 EKLIEEINSREDEKIDCFIADGNMG 118 (128)
Q Consensus 94 ~~ll~~l~~~~~~~~d~vI~D~~~~ 118 (128)
++.++.+.+ .+||+||.|..++
T Consensus 195 ~eAl~~~~~---~~~dlvl~D~~MP 216 (286)
T 3n0r_A 195 GEALEAVTR---RTPGLVLADIQLA 216 (286)
T ss_dssp HHHHHHHHH---CCCSEEEEESCCT
T ss_pred HHHHHHHHh---CCCCEEEEcCCCC
Confidence 455555554 5799999999887
No 390
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=33.53 E-value=38 Score=24.48 Aligned_cols=35 Identities=20% Similarity=0.372 Sum_probs=22.1
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHC--CCeEEEEeCcc
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKH--GFRVTFVNTDY 41 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~r--G~~Vt~~~t~~ 41 (128)
|.+ ||+++- .|.+.+.- |+.|.++ +++||++....
T Consensus 1 M~K-~VvIIG-gG~aGl~a----A~~L~~~~~~~~VtlI~~~~ 37 (430)
T 3hyw_A 1 MAK-HVVVIG-GGVGGIAT----AYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp -CC-EEEEEC-SSHHHHHH----HHHHHHHCTTCEEEEECSSS
T ss_pred CCC-cEEEEC-CCHHHHHH----HHHHhccCcCCeEEEEcCCC
Confidence 665 888886 45555544 4555543 48999987654
No 391
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=33.51 E-value=35 Score=22.08 Aligned_cols=20 Identities=10% Similarity=0.147 Sum_probs=16.4
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|.++.-.
T Consensus 15 ~~~a~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 15 AELAKLYDAEGKATYLTGRS 34 (230)
T ss_dssp HHHHHHHHHTTCCEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 57889999999998887543
No 392
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=33.49 E-value=35 Score=23.41 Aligned_cols=31 Identities=19% Similarity=0.246 Sum_probs=20.7
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
+|++.- +.|-+- .+|+++|.++|++|+.+.-
T Consensus 11 ~vlVTG--atGfIG--~~l~~~Ll~~G~~V~~~~r 41 (338)
T 2rh8_A 11 TACVVG--GTGFVA--SLLVKLLLQKGYAVNTTVR 41 (338)
T ss_dssp EEEEEC--TTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred EEEEEC--CchHHH--HHHHHHHHHCCCEEEEEEc
Confidence 454443 444443 3688999999999987653
No 393
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=33.48 E-value=39 Score=22.24 Aligned_cols=32 Identities=22% Similarity=0.379 Sum_probs=21.1
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
++++|.- +.|-+ =..++++|+++|++|.++.-
T Consensus 16 k~vlVTG-as~gI--G~~ia~~l~~~G~~V~~~~r 47 (247)
T 1uzm_A 16 RSVLVTG-GNRGI--GLAIAQRLAADGHKVAVTHR 47 (247)
T ss_dssp CEEEETT-TTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeC-CCCHH--HHHHHHHHHHCCCEEEEEeC
Confidence 3455553 33322 35788999999999988753
No 394
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=33.48 E-value=32 Score=23.23 Aligned_cols=19 Identities=21% Similarity=0.396 Sum_probs=15.8
Q ss_pred HHHHHHHHHCCCeEEEEeC
Q 040997 21 LEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t 39 (128)
..|+++|+++|++|+.+.-
T Consensus 14 ~~l~~~L~~~g~~V~~~~r 32 (312)
T 3ko8_A 14 SHLVDKLVELGYEVVVVDN 32 (312)
T ss_dssp HHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHhCCCEEEEEeC
Confidence 3678999999999998754
No 395
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=33.47 E-value=35 Score=22.72 Aligned_cols=33 Identities=15% Similarity=0.236 Sum_probs=22.3
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.-.+ |-+ =..+|++|+++|++|.++.-.
T Consensus 11 k~vlVTGas-~gI--G~aia~~l~~~G~~V~~~~r~ 43 (262)
T 3pk0_A 11 RSVVVTGGT-KGI--GRGIATVFARAGANVAVAGRS 43 (262)
T ss_dssp CEEEETTCS-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-cHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 566666433 322 247889999999998887543
No 396
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=33.44 E-value=14 Score=25.37 Aligned_cols=17 Identities=6% Similarity=0.030 Sum_probs=14.6
Q ss_pred cCChHHHHHHHHHHHHC
Q 040997 14 QGHVIPLLEFSQCLAKH 30 (128)
Q Consensus 14 ~GH~~P~l~la~~L~~r 30 (128)
.||+||.+-++..+..+
T Consensus 66 GaHlNPAVTla~~~~g~ 82 (258)
T 3c02_A 66 GAHLNLAVSIGLSSINK 82 (258)
T ss_dssp CCCCSHHHHHHHHHTTS
T ss_pred cCeeChHHHHHHHHhCC
Confidence 38999999999888765
No 397
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=33.41 E-value=27 Score=22.76 Aligned_cols=32 Identities=6% Similarity=0.119 Sum_probs=21.8
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
.++|.++- .|.+- ..+++.|++.|++|+++..
T Consensus 23 mmkI~IIG---~G~mG--~~la~~l~~~g~~V~~v~~ 54 (220)
T 4huj_A 23 MTTYAIIG---AGAIG--SALAERFTAAQIPAIIANS 54 (220)
T ss_dssp SCCEEEEE---CHHHH--HHHHHHHHHTTCCEEEECT
T ss_pred CCEEEEEC---CCHHH--HHHHHHHHhCCCEEEEEEC
Confidence 45677765 34333 3578889999999998444
No 398
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=33.38 E-value=1e+02 Score=20.11 Aligned_cols=33 Identities=27% Similarity=0.236 Sum_probs=23.5
Q ss_pred CeEEEEcCCC---c----CChHHHHHHHHHHHHCCCeEEE
Q 040997 4 PHVLVMPGPA---Q----GHVIPLLEFSQCLAKHGFRVTF 36 (128)
Q Consensus 4 ~hvl~~p~p~---~----GH~~P~l~la~~L~~rG~~Vt~ 36 (128)
..|.++.... . -...-..+|++.|+++|+.|..
T Consensus 24 ~~IaV~Gss~~~~~~~~~~~~~~A~~lg~~LA~~G~~vVs 63 (195)
T 1rcu_A 24 KKVVVVGYSGPVNKSPVSELRDICLELGRTLAKKGYLVFN 63 (195)
T ss_dssp CEEEEEECCSCTTSTTTGGGHHHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEEecCCCCCccccHHHHHHHHHHHHHHHHCCCEEEe
Confidence 3577777432 2 4567788999999999987655
No 399
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A*
Probab=33.37 E-value=38 Score=22.23 Aligned_cols=35 Identities=9% Similarity=0.145 Sum_probs=25.1
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCC--CeEEEEeCc
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHG--FRVTFVNTD 40 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG--~~Vt~~~t~ 40 (128)
.+++++. .|.| +.|++.+.+.|..++ .+|+++-..
T Consensus 107 ~~~vlia-gG~G-itP~~~~l~~l~~~~~~~~v~l~~~~ 143 (248)
T 1fdr_A 107 ETLWMLA-TGTA-IGPYLSILRLGKDLDRFKNLVLVHAA 143 (248)
T ss_dssp SEEEEEE-EGGG-GHHHHHHHHHCCSCTTCSEEEEEEEE
T ss_pred ceEEEEE-eccc-HHHHHHHHHHHHhhCCCCcEEEEEEc
Confidence 4566665 3444 899999999998764 678887544
No 400
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=33.32 E-value=36 Score=22.85 Aligned_cols=33 Identities=30% Similarity=0.448 Sum_probs=22.1
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.-.+. -+ =..+|++|+++|++|.++.-.
T Consensus 12 k~vlVTGas~-gI--G~aia~~l~~~G~~V~~~~r~ 44 (271)
T 3tzq_B 12 KVAIITGACG-GI--GLETSRVLARAGARVVLADLP 44 (271)
T ss_dssp CEEEEETTTS-HH--HHHHHHHHHHTTCEEEEEECT
T ss_pred CEEEEECCCc-HH--HHHHHHHHHHCCCEEEEEcCC
Confidence 4566664433 22 257899999999999886543
No 401
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=33.30 E-value=28 Score=24.81 Aligned_cols=33 Identities=15% Similarity=0.294 Sum_probs=24.2
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
.++|.++-....| ..+|..|++.|++|++....
T Consensus 29 ~mkI~VIGaG~mG-----~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWG-----TALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHTTTCCEEEECSC
T ss_pred CCeEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 4577777644444 35789999999999998765
No 402
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=33.30 E-value=31 Score=22.69 Aligned_cols=19 Identities=26% Similarity=0.487 Sum_probs=16.5
Q ss_pred HHHHHHHHHCCCeEEEEeC
Q 040997 21 LEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t 39 (128)
..++++|+++|++|+++.-
T Consensus 28 ~~~a~~l~~~G~~V~~~~r 46 (265)
T 1h5q_A 28 LAFTRAVAAAGANVAVIYR 46 (265)
T ss_dssp HHHHHHHHHTTEEEEEEES
T ss_pred HHHHHHHHHCCCeEEEEeC
Confidence 5789999999999988765
No 403
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=33.29 E-value=36 Score=22.56 Aligned_cols=32 Identities=22% Similarity=0.224 Sum_probs=21.2
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
++++|.-.+ |-+ =..++++|+++|++|.++.-
T Consensus 6 k~vlVTGas-~gI--G~~ia~~l~~~G~~V~~~~r 37 (260)
T 2qq5_A 6 QVCVVTGAS-RGI--GRGIALQLCKAGATVYITGR 37 (260)
T ss_dssp CEEEESSTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-chH--HHHHHHHHHHCCCEEEEEeC
Confidence 455555333 322 24789999999999887654
No 404
>2v3c_C SRP54, signal recognition 54 kDa protein; nucleotide-binding, signal recognition particle, GTP-binding, RNA-binding; 2.50A {Methanocaldococcus jannaschii} PDB: 3ndb_B
Probab=33.25 E-value=53 Score=24.18 Aligned_cols=38 Identities=16% Similarity=0.396 Sum_probs=33.3
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcch
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYY 42 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~ 42 (128)
.|+++-.+|.|=-.-...||..++.+|.+|.++....+
T Consensus 101 vI~ivG~~GvGKTTla~~La~~l~~~G~kVllv~~D~~ 138 (432)
T 2v3c_C 101 VILLVGIQGSGKTTTAAKLARYIQKRGLKPALIAADTY 138 (432)
T ss_dssp CEEEECCSSSSTTHHHHHHHHHHHHHHCCEEEECCSCC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEecccc
Confidence 57788888999999999999999999999999877644
No 405
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=33.08 E-value=1.2e+02 Score=21.54 Aligned_cols=43 Identities=9% Similarity=0.169 Sum_probs=35.8
Q ss_pred EEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchhhhhhh
Q 040997 6 VLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYHKRVVE 48 (128)
Q Consensus 6 vl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~~~~~~ 48 (128)
+++..-|+.|=-.=++++|..++..|..|.|++.+.....+..
T Consensus 49 iiIaG~pG~GKTt~al~ia~~~a~~g~~Vl~fSlEms~~ql~~ 91 (338)
T 4a1f_A 49 VIIGARPSMGKTSLMMNMVLSALNDDRGVAVFSLEMSAEQLAL 91 (338)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHHTTCEEEEEESSSCHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHcCCeEEEEeCCCCHHHHHH
Confidence 5566678999999999999999999999999999977654433
No 406
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=33.08 E-value=32 Score=23.32 Aligned_cols=18 Identities=17% Similarity=0.187 Sum_probs=15.2
Q ss_pred HHHHHHHHHCCCeEEEEe
Q 040997 21 LEFSQCLAKHGFRVTFVN 38 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~ 38 (128)
.+|+++|+++|++|+.+.
T Consensus 15 ~~l~~~L~~~G~~V~~~~ 32 (322)
T 2p4h_X 15 SWIIKSLLENGYSVNTTI 32 (322)
T ss_dssp HHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHCCCEEEEEE
Confidence 467899999999998765
No 407
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=33.06 E-value=66 Score=21.16 Aligned_cols=32 Identities=25% Similarity=0.307 Sum_probs=26.8
Q ss_pred cCCCcCChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 10 PGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 10 p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
.-+|.|=-.=...||..|+.+|.+|.++=...
T Consensus 10 ~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (263)
T 1hyq_A 10 GKGGTGKTTITANLGVALAQLGHDVTIVDADI 41 (263)
T ss_dssp SSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 35567889999999999999999999986543
No 408
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=33.04 E-value=36 Score=22.58 Aligned_cols=33 Identities=18% Similarity=0.260 Sum_probs=22.2
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.-.+.| + =..++++|+++|++|.++.-.
T Consensus 9 k~~lVTGas~g-I--G~a~a~~l~~~G~~V~~~~r~ 41 (255)
T 4eso_A 9 KKAIVIGGTHG-M--GLATVRRLVEGGAEVLLTGRN 41 (255)
T ss_dssp CEEEEETCSSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 45566644332 2 257899999999998887543
No 409
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=32.97 E-value=57 Score=21.90 Aligned_cols=33 Identities=18% Similarity=0.235 Sum_probs=22.1
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.-.+.| + =..+|++|+++|++|.++...
T Consensus 32 k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~r~ 64 (273)
T 3uf0_A 32 RTAVVTGAGSG-I--GRAIAHGYARAGAHVLAWGRT 64 (273)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCcH-H--HHHHHHHHHHCCCEEEEEcCH
Confidence 45555544332 2 257899999999999887643
No 410
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=32.95 E-value=66 Score=21.32 Aligned_cols=33 Identities=27% Similarity=0.317 Sum_probs=23.9
Q ss_pred CeEEEEcCCCcC----ChHHHHHHHHHHHHCCCeEEE
Q 040997 4 PHVLVMPGPAQG----HVIPLLEFSQCLAKHGFRVTF 36 (128)
Q Consensus 4 ~hvl~~p~p~~G----H~~P~l~la~~L~~rG~~Vt~ 36 (128)
+.|.++...-.| +..-..+|++.|+++|+.|..
T Consensus 38 ~~VaV~Gss~~~~~~~~~~~A~~lg~~La~~g~~lVs 74 (217)
T 1wek_A 38 PLVSVFGSARFGEGHPAYEAGYRLGRALAEAGFGVVT 74 (217)
T ss_dssp CEEEEECCSSCCTTSHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CEEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEe
Confidence 457777755544 456788899999999987655
No 411
>1h3f_A Tyrosyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase; HET: TYE; 2.00A {Thermus thermophilus} SCOP: c.26.1.1 d.66.1.4 PDB: 1h3e_A*
Probab=32.92 E-value=37 Score=25.18 Aligned_cols=27 Identities=22% Similarity=0.441 Sum_probs=21.0
Q ss_pred CChHHHHHHHHHHHHCCCeEEEEeCcch
Q 040997 15 GHVIPLLEFSQCLAKHGFRVTFVNTDYY 42 (128)
Q Consensus 15 GH~~P~l~la~~L~~rG~~Vt~~~t~~~ 42 (128)
||+.| +..-++|+..||++.++.....
T Consensus 54 Gh~v~-l~~l~~lQ~~G~~~i~lIgD~t 80 (432)
T 1h3f_A 54 GHAVV-LRKMRQFQELGHKVVLIIGDFT 80 (432)
T ss_dssp HHHHH-HHHHHHHHHTTCEEEEEECCCC
T ss_pred hhHHH-HHHHHHHHHCCCCEEEEEccce
Confidence 89896 5556778889999999877643
No 412
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=32.91 E-value=34 Score=20.34 Aligned_cols=29 Identities=14% Similarity=0.153 Sum_probs=17.9
Q ss_pred HHHHHHHhcCCCCCccEEEeCCCccc--HHHHHH
Q 040997 94 EKLIEEINSREDEKIDCFIADGNMGW--SLEVAK 125 (128)
Q Consensus 94 ~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~vA~ 125 (128)
++.++.+.+ .+||+||.|..++- +.++.+
T Consensus 41 ~~al~~l~~---~~~dlii~D~~l~~~~g~~~~~ 71 (154)
T 3gt7_A 41 REAVRFLSL---TRPDLIISDVLMPEMDGYALCR 71 (154)
T ss_dssp HHHHHHHTT---CCCSEEEEESCCSSSCHHHHHH
T ss_pred HHHHHHHHh---CCCCEEEEeCCCCCCCHHHHHH
Confidence 444555543 57999999986642 444443
No 413
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=32.90 E-value=15 Score=25.44 Aligned_cols=17 Identities=18% Similarity=0.239 Sum_probs=14.8
Q ss_pred cCChHHHHHHHHHHHHC
Q 040997 14 QGHVIPLLEFSQCLAKH 30 (128)
Q Consensus 14 ~GH~~P~l~la~~L~~r 30 (128)
.||+||.+-|+-.+..+
T Consensus 64 GaHlNPAVTla~~~~g~ 80 (281)
T 1ldf_A 64 GAHLNPAVTIALWLFAC 80 (281)
T ss_dssp CCCCSHHHHHHHHHHSC
T ss_pred cCeeChHHHHHHHHcCC
Confidence 38999999999988765
No 414
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=32.85 E-value=40 Score=22.73 Aligned_cols=34 Identities=12% Similarity=0.319 Sum_probs=23.0
Q ss_pred eEEEEcCCCc-CChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQ-GHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~-GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|...+. |-+- ..++++|+++|++|+++.-.
T Consensus 22 k~vlVTGas~~~gIG--~~ia~~l~~~G~~V~~~~r~ 56 (285)
T 2p91_A 22 KRALITGVANERSIA--YGIAKSFHREGAQLAFTYAT 56 (285)
T ss_dssp CEEEECCCSSTTSHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCCCCcHH--HHHHHHHHHcCCEEEEEeCC
Confidence 4566664431 3332 57899999999999887544
No 415
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=32.82 E-value=15 Score=23.65 Aligned_cols=25 Identities=24% Similarity=0.197 Sum_probs=19.3
Q ss_pred HHHHHHHHHCCCeEEEEeCcchhhh
Q 040997 21 LEFSQCLAKHGFRVTFVNTDYYHKR 45 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~~~~~~ 45 (128)
-+|.++|..+|++||=.|.+...+.
T Consensus 38 eEL~~~L~~~Gi~vTQATlSRDikE 62 (170)
T 3lap_A 38 NELAALLAAEGIEVTQATLSRDLEE 62 (170)
T ss_dssp HHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcCchhHHHHHHH
Confidence 4789999999999877666655544
No 416
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=32.78 E-value=37 Score=22.69 Aligned_cols=33 Identities=18% Similarity=0.421 Sum_probs=22.5
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.-.+.| + =..++++|+++|++|.++.-.
T Consensus 21 k~vlVTGas~g-I--G~aia~~l~~~G~~V~~~~r~ 53 (266)
T 4egf_A 21 KRALITGATKG-I--GADIARAFAAAGARLVLSGRD 53 (266)
T ss_dssp CEEEETTTTSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCcH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 56666644432 2 257899999999998876543
No 417
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=32.78 E-value=32 Score=23.39 Aligned_cols=34 Identities=3% Similarity=0.002 Sum_probs=23.4
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
++|++.- +.|.+- ..++++|+++|++|+.++-..
T Consensus 5 ~~ilVtG--atG~iG--~~l~~~L~~~g~~V~~~~R~~ 38 (321)
T 3c1o_A 5 EKIIIYG--GTGYIG--KFMVRASLSFSHPTFIYARPL 38 (321)
T ss_dssp CCEEEET--TTSTTH--HHHHHHHHHTTCCEEEEECCC
T ss_pred cEEEEEc--CCchhH--HHHHHHHHhCCCcEEEEECCc
Confidence 3566654 445443 367899999999999887653
No 418
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=32.76 E-value=90 Score=19.64 Aligned_cols=35 Identities=9% Similarity=0.020 Sum_probs=26.4
Q ss_pred EcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcchh
Q 040997 9 MPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDYYH 43 (128)
Q Consensus 9 ~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~~~ 43 (128)
+.+...|--.-+++.++...++|..|..+|.....
T Consensus 118 I~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s 152 (199)
T 1x92_A 118 LAISTSGNSANVIQAIQAAHDREMLVVALTGRDGG 152 (199)
T ss_dssp EEECSSSCCHHHHHHHHHHHHTTCEEEEEECTTCH
T ss_pred EEEeCCCCCHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 33445677778899999999999998777775443
No 419
>1xfi_A Unknown protein; structural genomics, protein structure initiative, CESG, AT2G17340, center for eukaryotic structural genomics; 1.70A {Arabidopsis thaliana} SCOP: e.50.1.1 PDB: 2q40_A
Probab=32.73 E-value=42 Score=24.29 Aligned_cols=37 Identities=14% Similarity=0.357 Sum_probs=26.1
Q ss_pred CeEEEEcCCCc-CChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 4 PHVLVMPGPAQ-GHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 4 ~hvl~~p~p~~-GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
.+|+++.==+. .-+.=++-|++.|.++|++|++..=+
T Consensus 213 k~Vl~v~DNAG~Eiv~D~L~La~~Ll~~g~kVvl~vK~ 250 (367)
T 1xfi_A 213 KKAVIFVDNSGADIILGILPFARELLRRGAQVVLAANE 250 (367)
T ss_dssp CEEEEECCBTTHHHHHTHHHHHHHHHHTTCEEEEEEBS
T ss_pred CEEEEEecCCCchhhccHHHHHHHHHHcCCEEEEEECC
Confidence 35666663222 45555688999999999999996443
No 420
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=32.71 E-value=37 Score=22.43 Aligned_cols=32 Identities=19% Similarity=0.295 Sum_probs=22.0
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
++++|.-.+ |-+ =..++++|+++|++|.++.-
T Consensus 8 k~~lVTGas-~gI--G~aia~~l~~~G~~V~~~~r 39 (257)
T 3tpc_A 8 RVFIVTGAS-SGL--GAAVTRMLAQEGATVLGLDL 39 (257)
T ss_dssp CEEEEESTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCC-CHH--HHHHHHHHHHCCCEEEEEeC
Confidence 556666333 322 25789999999999988654
No 421
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=32.70 E-value=40 Score=22.50 Aligned_cols=20 Identities=15% Similarity=0.202 Sum_probs=16.4
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|.++.-.
T Consensus 20 ~aia~~l~~~G~~V~~~~r~ 39 (263)
T 2a4k_A 20 RAALDLFAREGASLVAVDRE 39 (263)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999887543
No 422
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=32.70 E-value=33 Score=22.77 Aligned_cols=31 Identities=19% Similarity=0.318 Sum_probs=21.7
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
.+|+++-....| +..|..|+++|++||++-.
T Consensus 3 ~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~ 33 (297)
T 3fbs_A 3 FDVIIIGGSYAG-----LSAALQLGRARKNILLVDA 33 (297)
T ss_dssp EEEEEECCSHHH-----HHHHHHHHHTTCCEEEEEC
T ss_pred CCEEEECCCHHH-----HHHHHHHHhCCCCEEEEeC
Confidence 366666532223 5678888999999999964
No 423
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=32.68 E-value=32 Score=24.05 Aligned_cols=32 Identities=28% Similarity=0.463 Sum_probs=23.6
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
..|++|-....| +..|..|+++|++|+++--.
T Consensus 6 ~dVvIIGgGi~G-----l~~A~~La~~G~~V~lle~~ 37 (382)
T 1y56_B 6 SEIVVIGGGIVG-----VTIAHELAKRGEEVTVIEKR 37 (382)
T ss_dssp CSEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CCEEEECCCHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 467777644345 66788899999999998554
No 424
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=32.65 E-value=40 Score=19.34 Aligned_cols=11 Identities=18% Similarity=0.157 Sum_probs=8.6
Q ss_pred CccEEEeCCCc
Q 040997 107 KIDCFIADGNM 117 (128)
Q Consensus 107 ~~d~vI~D~~~ 117 (128)
+||+||.|...
T Consensus 54 ~~dlii~d~~~ 64 (140)
T 3cg0_A 54 RPDIALVDIML 64 (140)
T ss_dssp CCSEEEEESSC
T ss_pred CCCEEEEecCC
Confidence 68888888755
No 425
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=32.64 E-value=40 Score=22.76 Aligned_cols=20 Identities=10% Similarity=0.170 Sum_probs=16.6
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|+++.-.
T Consensus 40 ~~la~~L~~~G~~V~~~~r~ 59 (302)
T 1w6u_A 40 KGMTTLLSSLGAQCVIASRK 59 (302)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 57889999999999887554
No 426
>2ip1_A Tryptophanyl-tRNA synthetase; rossmann fold, structural genomics, PSI-2, protein structure initiative; HET: PG4; 1.80A {Saccharomyces cerevisiae} PDB: 3kt0_A* 3kt3_A* 3kt6_A* 3kt8_A*
Probab=32.61 E-value=32 Score=25.50 Aligned_cols=25 Identities=28% Similarity=0.426 Sum_probs=20.9
Q ss_pred CChHHHHHHHHHHHH-CCCeEEEEeCc
Q 040997 15 GHVIPLLEFSQCLAK-HGFRVTFVNTD 40 (128)
Q Consensus 15 GH~~P~l~la~~L~~-rG~~Vt~~~t~ 40 (128)
||+.|++.+- .|+. .||++.++.+.
T Consensus 119 Gh~v~~~~l~-~lQ~~~g~~~i~lI~D 144 (432)
T 2ip1_A 119 GHMIPFVFTK-WLQEVFDVPLVIELTD 144 (432)
T ss_dssp GGHHHHHHHH-HHHHHHTCCEEEEECH
T ss_pred HHHHHHHHHH-HHHHHcCCeEEEEEec
Confidence 9999988765 5887 89999998876
No 427
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=32.59 E-value=41 Score=22.48 Aligned_cols=32 Identities=22% Similarity=0.402 Sum_probs=22.2
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
++++|...+.| + =.+++++|+++|++|.++.-
T Consensus 30 k~vlITGas~g-I--G~~la~~l~~~G~~V~~~~r 61 (271)
T 4iin_A 30 KNVLITGASKG-I--GAEIAKTLASMGLKVWINYR 61 (271)
T ss_dssp CEEEETTCSSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcH-H--HHHHHHHHHHCCCEEEEEeC
Confidence 45566644332 2 25889999999999988765
No 428
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID}
Probab=32.59 E-value=70 Score=24.08 Aligned_cols=26 Identities=23% Similarity=0.465 Sum_probs=19.9
Q ss_pred CChHHHHH---HHHHHHHCCCeEEEEeCc
Q 040997 15 GHVIPLLE---FSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 15 GH~~P~l~---la~~L~~rG~~Vt~~~t~ 40 (128)
||+-+.+- ++|.|..+|++|.+++.-
T Consensus 43 GH~r~~v~~D~laR~lr~~G~~V~~~~g~ 71 (536)
T 4dlp_A 43 GHAYELIATDAMARFQRLNGMDVYFLTGT 71 (536)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred chhHHHHHHHHHHHHHHhcCCcEEEecCc
Confidence 78776554 678888899999997553
No 429
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=32.56 E-value=99 Score=19.81 Aligned_cols=38 Identities=16% Similarity=0.179 Sum_probs=31.8
Q ss_pred CCeEEEEcCC-CcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 3 SPHVLVMPGP-AQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 3 ~~hvl~~p~p-~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
+..+.++..+ +.|=-.-++.+++++..+|.+|-++...
T Consensus 7 ~g~i~v~~G~mgsGKTT~ll~~a~r~~~~g~kV~v~k~~ 45 (191)
T 1xx6_A 7 HGWVEVIVGPMYSGKSEELIRRIRRAKIAKQKIQVFKPE 45 (191)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCEEEEEECCCCCcHHHHHHHHHHHHHHCCCEEEEEEec
Confidence 4467777766 7899999999999999999999998744
No 430
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=32.54 E-value=35 Score=24.19 Aligned_cols=32 Identities=16% Similarity=0.247 Sum_probs=22.3
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
+.+|++|-..-.| +.+|..|+++|++|+++=-
T Consensus 23 ~~dV~IVGaG~aG-----l~~A~~La~~G~~V~v~E~ 54 (407)
T 3rp8_A 23 HMKAIVIGAGIGG-----LSAAVALKQSGIDCDVYEA 54 (407)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCHHH-----HHHHHHHHhCCCCEEEEeC
Confidence 3467766533223 6678889999999999843
No 431
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=32.49 E-value=16 Score=26.38 Aligned_cols=34 Identities=21% Similarity=0.143 Sum_probs=24.0
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCC-CeEEEEeC
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHG-FRVTFVNT 39 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG-~~Vt~~~t 39 (128)
|+...|++|-....| +..|..|+++| ++|+++--
T Consensus 21 m~~~dVvIIGgGiaG-----ls~A~~La~~G~~~V~vlE~ 55 (448)
T 3axb_A 21 MPRFDYVVVGAGVVG-----LAAAYYLKVWSGGSVLVVDA 55 (448)
T ss_dssp CCEEEEEEECCSHHH-----HHHHHHHHHHHCSCEEEEES
T ss_pred CCcCCEEEECcCHHH-----HHHHHHHHhCCCCcEEEEcc
Confidence 444467777543334 56788889999 99999865
No 432
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=32.48 E-value=29 Score=22.79 Aligned_cols=17 Identities=18% Similarity=0.299 Sum_probs=14.9
Q ss_pred HHHHHHHHHCCCeEEEE
Q 040997 21 LEFSQCLAKHGFRVTFV 37 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~ 37 (128)
..++++|+++|++|.++
T Consensus 15 ~~ia~~l~~~G~~V~~~ 31 (244)
T 1zmo_A 15 PAAVEALTQDGYTVVCH 31 (244)
T ss_dssp HHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHCCCEEEEe
Confidence 47899999999998876
No 433
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=32.47 E-value=84 Score=18.93 Aligned_cols=35 Identities=14% Similarity=0.027 Sum_probs=24.1
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
..|++++- .|+.+-....++.|...|++|.++...
T Consensus 73 ~~ivvyC~--~g~~~rs~~aa~~L~~~G~~v~~l~GG 107 (144)
T 3nhv_A 73 KVIITYCW--GPACNGATKAAAKFAQLGFRVKELIGG 107 (144)
T ss_dssp SEEEEECS--CTTCCHHHHHHHHHHHTTCEEEEEESH
T ss_pred CeEEEEEC--CCCccHHHHHHHHHHHCCCeEEEeCCc
Confidence 46888874 455334556788999999987766543
No 434
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=32.46 E-value=14 Score=25.64 Aligned_cols=17 Identities=24% Similarity=0.466 Sum_probs=14.6
Q ss_pred cCChHHHHHHHHHHHHC
Q 040997 14 QGHVIPLLEFSQCLAKH 30 (128)
Q Consensus 14 ~GH~~P~l~la~~L~~r 30 (128)
.||+||.+-|+..+..+
T Consensus 108 GaHlNPAVTla~~~~g~ 124 (279)
T 2w2e_A 108 GGNLNPAVTLALVLARA 124 (279)
T ss_dssp CCCCSHHHHHHHHHTTS
T ss_pred ccccChHHHHHHHHcCC
Confidence 48999999999888765
No 435
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=32.44 E-value=38 Score=22.58 Aligned_cols=33 Identities=15% Similarity=0.272 Sum_probs=22.4
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.-.+.| + =..++++|+++|++|.++.-.
T Consensus 12 k~vlVTGas~g-I--G~aia~~l~~~G~~V~~~~r~ 44 (264)
T 3ucx_A 12 KVVVISGVGPA-L--GTTLARRCAEQGADLVLAART 44 (264)
T ss_dssp CEEEEESCCTT-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred cEEEEECCCcH-H--HHHHHHHHHHCcCEEEEEeCC
Confidence 55666644432 2 257899999999998876543
No 436
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=32.43 E-value=61 Score=21.40 Aligned_cols=38 Identities=21% Similarity=0.316 Sum_probs=29.1
Q ss_pred CeEEEEc--CCCcCChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 4 PHVLVMP--GPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 4 ~hvl~~p--~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
++++.+. -+|.|=-.-...||..|+.+|.+|-++=...
T Consensus 6 ~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 45 (257)
T 1wcv_1 6 VRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDP 45 (257)
T ss_dssp CCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 3454443 4556888999999999999999999886553
No 437
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=32.40 E-value=42 Score=22.33 Aligned_cols=19 Identities=21% Similarity=0.359 Sum_probs=15.8
Q ss_pred HHHHHHHHHCCCeEEEEeC
Q 040997 21 LEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t 39 (128)
..++++|+++|++|.++.-
T Consensus 35 ~aia~~l~~~G~~V~~~~r 53 (253)
T 2nm0_A 35 LAIARAFADAGDKVAITYR 53 (253)
T ss_dssp HHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHCCCEEEEEeC
Confidence 5788999999999988653
No 438
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=32.39 E-value=34 Score=20.25 Aligned_cols=22 Identities=14% Similarity=0.339 Sum_probs=15.4
Q ss_pred HHHHHHHhcCCCCCccEEEeCCCcc
Q 040997 94 EKLIEEINSREDEKIDCFIADGNMG 118 (128)
Q Consensus 94 ~~ll~~l~~~~~~~~d~vI~D~~~~ 118 (128)
++.++.+.+ .+||+||.|..++
T Consensus 48 ~~a~~~l~~---~~~dlvi~D~~l~ 69 (153)
T 3hv2_A 48 TQALQLLAS---REVDLVISAAHLP 69 (153)
T ss_dssp HHHHHHHHH---SCCSEEEEESCCS
T ss_pred HHHHHHHHc---CCCCEEEEeCCCC
Confidence 455555544 5799999998764
No 439
>2pid_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, protein-substrate complex, ATP-BI ligase, mitochondrion, nucleotide-binding, protein biosynth; HET: YSA; 2.20A {Homo sapiens} PDB: 3zxi_A*
Probab=32.38 E-value=43 Score=24.04 Aligned_cols=25 Identities=28% Similarity=0.405 Sum_probs=20.2
Q ss_pred CChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 15 GHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 15 GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
||+.|+.. -++|+..||++.++...
T Consensus 63 Ghl~~l~~-~~~lQ~~G~~~~~lIaD 87 (356)
T 2pid_A 63 GHLLALLG-LFHLQRAGHNVIALVGG 87 (356)
T ss_dssp HHHHHHHH-HHHHHHTTCEEEEEECT
T ss_pred HHHHHHHH-HHHHHHCCCcEEEEEcc
Confidence 88888776 46788899999998754
No 440
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=32.37 E-value=38 Score=22.59 Aligned_cols=33 Identities=30% Similarity=0.417 Sum_probs=22.4
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.-.+.| + =..++++|+++|++|.++.-.
T Consensus 9 k~~lVTGas~G-I--G~aia~~l~~~G~~V~~~~r~ 41 (265)
T 3lf2_A 9 AVAVVTGGSSG-I--GLATVELLLEAGAAVAFCARD 41 (265)
T ss_dssp CEEEEETCSSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCCh-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 45666644432 2 357899999999998877543
No 441
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=32.37 E-value=38 Score=22.75 Aligned_cols=32 Identities=25% Similarity=0.406 Sum_probs=21.5
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
+.++|.-.+.| + =..++++|+++|++|.++.-
T Consensus 15 k~vlVTGas~G-I--G~aia~~l~~~G~~V~~~~r 46 (269)
T 3vtz_A 15 KVAIVTGGSSG-I--GLAVVDALVRYGAKVVSVSL 46 (269)
T ss_dssp CEEEESSTTSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCCH-H--HHHHHHHHHHCCCEEEEEeC
Confidence 45566643332 2 25789999999999988653
No 442
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=32.36 E-value=41 Score=22.50 Aligned_cols=20 Identities=15% Similarity=0.298 Sum_probs=16.5
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|+++.-.
T Consensus 46 ~~la~~l~~~G~~V~~~~r~ 65 (279)
T 1xg5_A 46 AAVARALVQQGLKVVGCART 65 (279)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEECC
Confidence 57899999999999887543
No 443
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31
Probab=32.36 E-value=85 Score=18.97 Aligned_cols=36 Identities=19% Similarity=0.392 Sum_probs=23.0
Q ss_pred CCeEEEEcCCCcC---ChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 3 SPHVLVMPGPAQG---HVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 3 ~~hvl~~p~p~~G---H~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++.|++++..+.+ ++.+. +++.|+++|++|..+.-+
T Consensus 4 ~p~vv~~HG~~~~~~~~~~~~--~~~~l~~~g~~v~~~d~~ 42 (192)
T 1uxo_A 4 TKQVYIIHGYRASSTNHWFPW--LKKRLLADGVQADILNMP 42 (192)
T ss_dssp CCEEEEECCTTCCTTSTTHHH--HHHHHHHTTCEEEEECCS
T ss_pred CCEEEEEcCCCCCcchhHHHH--HHHHHHhCCcEEEEecCC
Confidence 3468888854442 23443 445788899998887544
No 444
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=32.33 E-value=32 Score=23.99 Aligned_cols=31 Identities=26% Similarity=0.385 Sum_probs=21.6
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
..|++|-....| +..|..|+++|++|+++--
T Consensus 4 ~dvvIIGaG~~G-----l~~A~~La~~G~~V~vie~ 34 (389)
T 2gf3_A 4 FDVIVVGAGSMG-----MAAGYQLAKQGVKTLLVDA 34 (389)
T ss_dssp EEEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCEEEECCCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 356666533233 5678889999999999843
No 445
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=32.32 E-value=38 Score=22.73 Aligned_cols=20 Identities=20% Similarity=0.386 Sum_probs=16.4
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|.++.-.
T Consensus 23 ~~ia~~l~~~G~~V~~~~r~ 42 (270)
T 1yde_A 23 AGIVRAFVNSGARVVICDKD 42 (270)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999887543
No 446
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=32.31 E-value=47 Score=25.43 Aligned_cols=35 Identities=26% Similarity=0.327 Sum_probs=24.2
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
|....|+++-....| +.+|..|+++|++|+++-..
T Consensus 21 M~~~DVvIVGgG~AG-----l~aA~~Lar~G~~V~LiEr~ 55 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAG-----SVAGLTLHKLGHDVTIYERS 55 (591)
T ss_dssp CCCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCCCCEEEECcCHHH-----HHHHHHHHcCCCCEEEEcCC
Confidence 455678877643334 55677888899999998543
No 447
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=32.29 E-value=80 Score=23.28 Aligned_cols=38 Identities=8% Similarity=0.128 Sum_probs=29.9
Q ss_pred CCeEEEEcCCCcCCh-----HHHHHHHHHHHHCCCeEEEEeCc
Q 040997 3 SPHVLVMPGPAQGHV-----IPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~-----~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
..+|.++-..+-... .|.+.+.++|..+|.+|.+.=+.
T Consensus 329 ~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~ 371 (467)
T 2q3e_A 329 DKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPK 371 (467)
T ss_dssp TCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEEeeccCCCCcchhhChHHHHHHHHHHCCCEEEEEcCc
Confidence 457777776665544 49999999999999999987554
No 448
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=32.27 E-value=41 Score=22.45 Aligned_cols=20 Identities=10% Similarity=-0.019 Sum_probs=16.7
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|+++.-.
T Consensus 45 ~~la~~L~~~G~~V~~~~r~ 64 (272)
T 1yb1_A 45 RLTAYEFAKLKSKLVLWDIN 64 (272)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEEcC
Confidence 57899999999999887654
No 449
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=32.21 E-value=38 Score=22.89 Aligned_cols=33 Identities=21% Similarity=0.350 Sum_probs=22.2
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|...+.| + =..++++|+++|++|.++.-.
T Consensus 28 k~vlVTGas~G-I--G~aia~~l~~~G~~V~~~~r~ 60 (277)
T 4dqx_A 28 RVCIVTGGGSG-I--GRATAELFAKNGAYVVVADVN 60 (277)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCcH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 45666644332 2 257899999999999887543
No 450
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=32.18 E-value=31 Score=23.40 Aligned_cols=30 Identities=17% Similarity=0.160 Sum_probs=21.1
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEe
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~ 38 (128)
+|++.- +.|-+- ..|+++|+++|++|+.+.
T Consensus 4 ~vlVtG--atG~iG--~~l~~~L~~~g~~V~~~~ 33 (315)
T 2ydy_A 4 RVLVTG--ATGLLG--RAVHKEFQQNNWHAVGCG 33 (315)
T ss_dssp EEEEET--TTSHHH--HHHHHHHHTTTCEEEEEC
T ss_pred eEEEEC--CCcHHH--HHHHHHHHhCCCeEEEEc
Confidence 565554 334443 367899999999999876
No 451
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=32.17 E-value=38 Score=22.77 Aligned_cols=33 Identities=21% Similarity=0.228 Sum_probs=22.5
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.-.+. -+ =..+|++|+++|++|.++.-.
T Consensus 29 k~~lVTGas~-GI--G~aia~~la~~G~~V~~~~r~ 61 (270)
T 3ftp_A 29 QVAIVTGASR-GI--GRAIALELARRGAMVIGTATT 61 (270)
T ss_dssp CEEEETTCSS-HH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCC-HH--HHHHHHHHHHCCCEEEEEeCC
Confidence 5666664333 22 257899999999999876543
No 452
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=32.12 E-value=41 Score=22.74 Aligned_cols=20 Identities=15% Similarity=0.140 Sum_probs=16.6
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|+++.-.
T Consensus 32 ~~la~~l~~~G~~V~~~~r~ 51 (303)
T 1yxm_A 32 KAIVKELLELGSNVVIASRK 51 (303)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999887543
No 453
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=32.12 E-value=29 Score=19.95 Aligned_cols=13 Identities=31% Similarity=0.281 Sum_probs=10.4
Q ss_pred CCccEEEeCCCcc
Q 040997 106 EKIDCFIADGNMG 118 (128)
Q Consensus 106 ~~~d~vI~D~~~~ 118 (128)
.+||+||.|...+
T Consensus 50 ~~~dlvi~d~~l~ 62 (137)
T 3hdg_A 50 HAPDVIITDIRMP 62 (137)
T ss_dssp HCCSEEEECSSCS
T ss_pred cCCCEEEEeCCCC
Confidence 3799999998654
No 454
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=32.06 E-value=42 Score=22.58 Aligned_cols=34 Identities=9% Similarity=0.320 Sum_probs=22.9
Q ss_pred eEEEEcCCC--cCChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 5 HVLVMPGPA--QGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 5 hvl~~p~p~--~GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
++++|.-.+ .| + =..+|++|+++|++|.++.-..
T Consensus 27 k~vlVTGasg~~G-I--G~~ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 27 KKILITGLLSNKS-I--AYGIAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp CEEEECCCCSTTC-H--HHHHHHHHHHTTCEEEEEECTT
T ss_pred CEEEEECCCCCCC-H--HHHHHHHHHHcCCEEEEeeCch
Confidence 456666432 11 2 2578999999999998876544
No 455
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=31.99 E-value=38 Score=23.13 Aligned_cols=33 Identities=21% Similarity=0.222 Sum_probs=22.7
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
.+|++.- +.|-+- ..|+++|.++|++|+.+.-.
T Consensus 15 ~~vlVTG--atG~iG--~~l~~~L~~~g~~V~~~~r~ 47 (335)
T 1rpn_A 15 RSALVTG--ITGQDG--AYLAKLLLEKGYRVHGLVAR 47 (335)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred CeEEEEC--CCChHH--HHHHHHHHHCCCeEEEEeCC
Confidence 3566554 444443 46889999999999987643
No 456
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=31.99 E-value=1.1e+02 Score=19.93 Aligned_cols=33 Identities=21% Similarity=0.293 Sum_probs=22.9
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
.++++|.-.+.| + =..++++|+++|++|.++..
T Consensus 7 ~k~vlITGas~g-I--G~~~a~~l~~~G~~v~~~~~ 39 (255)
T 3icc_A 7 GKVALVTGASRG-I--GRAIAKRLANDGALVAIHYG 39 (255)
T ss_dssp TCEEEETTCSSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCh-H--HHHHHHHHHHCCCeEEEEeC
Confidence 456666644443 2 35789999999999988644
No 457
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=31.95 E-value=74 Score=20.52 Aligned_cols=39 Identities=15% Similarity=0.179 Sum_probs=30.3
Q ss_pred CCeEEEEc--CCCcCChHHHHHHHHHHHHC-CCeEEEEeCcc
Q 040997 3 SPHVLVMP--GPAQGHVIPLLEFSQCLAKH-GFRVTFVNTDY 41 (128)
Q Consensus 3 ~~hvl~~p--~p~~GH~~P~l~la~~L~~r-G~~Vt~~~t~~ 41 (128)
+++++.+. -+|.|=-.-...||..|+++ |.+|-++=...
T Consensus 3 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~ 44 (245)
T 3ea0_A 3 AKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISL 44 (245)
T ss_dssp CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCT
T ss_pred CCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCC
Confidence 44554443 46679999999999999998 99999886653
No 458
>2jan_A Tyrosyl-tRNA synthetase; protein biosynthesis, aminoacyl-tRNA synthetase, tyrrs, ligase, tyrosine, RNA-binding, ATP-binding; 2.9A {Mycobacterium tuberculosis}
Probab=31.88 E-value=51 Score=24.47 Aligned_cols=25 Identities=28% Similarity=0.578 Sum_probs=20.5
Q ss_pred CChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 15 GHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 15 GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
||+.|+.. -++|+..||++.++...
T Consensus 49 Ghlv~l~~-l~~lQ~~G~~~i~lIgD 73 (432)
T 2jan_A 49 GHLVPLLT-LRRFQRAGHRPIVLAGG 73 (432)
T ss_dssp GGHHHHHH-HHHHHHTTCEEEEEECH
T ss_pred HHHHHHHH-HHHHHHCCCcEEEEEcC
Confidence 99998776 57888899999998643
No 459
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=31.87 E-value=39 Score=22.55 Aligned_cols=33 Identities=12% Similarity=0.176 Sum_probs=22.7
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.-.+. -+ =..++++|+++|++|.++.-.
T Consensus 11 k~~lVTGas~-gI--G~aia~~l~~~G~~V~~~~r~ 43 (267)
T 3t4x_A 11 KTALVTGSTA-GI--GKAIATSLVAEGANVLINGRR 43 (267)
T ss_dssp CEEEETTCSS-HH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCc-HH--HHHHHHHHHHCCCEEEEEeCC
Confidence 5666664433 22 257889999999999887543
No 460
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=31.85 E-value=43 Score=22.24 Aligned_cols=33 Identities=24% Similarity=0.342 Sum_probs=21.8
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.... |-+ =..++++|+++|++|.++.-.
T Consensus 30 k~vlITGas-~gI--G~~la~~l~~~G~~V~~~~r~ 62 (262)
T 3rkr_A 30 QVAVVTGAS-RGI--GAAIARKLGSLGARVVLTARD 62 (262)
T ss_dssp CEEEESSTT-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-ChH--HHHHHHHHHHCCCEEEEEECC
Confidence 455565333 322 257899999999998876543
No 461
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=31.76 E-value=77 Score=21.29 Aligned_cols=35 Identities=20% Similarity=0.241 Sum_probs=28.0
Q ss_pred EEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 6 VLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 6 vl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
|.+..-+|.|=-.-...||..|+.+|.+|-++=..
T Consensus 5 Iavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~D 39 (289)
T 2afh_E 5 CAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCD 39 (289)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred EEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 44445667799999999999999999999887443
No 462
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=31.75 E-value=59 Score=22.55 Aligned_cols=33 Identities=12% Similarity=0.213 Sum_probs=22.6
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHH--CCCeEEEEeC
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAK--HGFRVTFVNT 39 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~--rG~~Vt~~~t 39 (128)
..+|++.- +.|-+- ..|+++|++ +|++|+.+.-
T Consensus 10 ~~~vlVTG--atG~IG--~~l~~~L~~~~~g~~V~~~~r 44 (362)
T 3sxp_A 10 NQTILITG--GAGFVG--SNLAFHFQENHPKAKVVVLDK 44 (362)
T ss_dssp TCEEEEET--TTSHHH--HHHHHHHHHHCTTSEEEEEEC
T ss_pred CCEEEEEC--CCCHHH--HHHHHHHHhhCCCCeEEEEEC
Confidence 34566554 344433 367899999 9999999864
No 463
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=31.72 E-value=43 Score=22.47 Aligned_cols=32 Identities=16% Similarity=0.225 Sum_probs=22.0
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
++++|.-.+. -+ =..+|++|+++|++|.+...
T Consensus 29 k~vlVTGas~-gI--G~aia~~la~~G~~V~~~~~ 60 (269)
T 4dmm_A 29 RIALVTGASR-GI--GRAIALELAAAGAKVAVNYA 60 (269)
T ss_dssp CEEEETTCSS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCC-HH--HHHHHHHHHHCCCEEEEEeC
Confidence 4566664433 22 25789999999999988654
No 464
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=31.71 E-value=39 Score=22.77 Aligned_cols=33 Identities=18% Similarity=0.322 Sum_probs=22.3
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|...+. -+ =..++++|+++|++|.++.-.
T Consensus 29 k~~lVTGas~-GI--G~aia~~la~~G~~V~~~~r~ 61 (272)
T 4dyv_A 29 KIAIVTGAGS-GV--GRAVAVALAGAGYGVALAGRR 61 (272)
T ss_dssp CEEEETTTTS-HH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCc-HH--HHHHHHHHHHCCCEEEEEECC
Confidence 5666664332 22 257899999999998887543
No 465
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=31.66 E-value=43 Score=22.54 Aligned_cols=33 Identities=18% Similarity=0.274 Sum_probs=22.3
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|... .|-+ =..++++|+++|++|.++.-.
T Consensus 30 k~vlVTGa-s~gI--G~~ia~~l~~~G~~V~~~~r~ 62 (283)
T 1g0o_A 30 KVALVTGA-GRGI--GREMAMELGRRGCKVIVNYAN 62 (283)
T ss_dssp CEEEETTT-TSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCC-CcHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 45556533 3333 257899999999999887544
No 466
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=31.66 E-value=39 Score=22.90 Aligned_cols=31 Identities=19% Similarity=0.213 Sum_probs=21.2
Q ss_pred eEEEEcCCC--cCChHHHHHHHHHHHHCCCeEEEEe
Q 040997 5 HVLVMPGPA--QGHVIPLLEFSQCLAKHGFRVTFVN 38 (128)
Q Consensus 5 hvl~~p~p~--~GH~~P~l~la~~L~~rG~~Vt~~~ 38 (128)
++++|.-.+ .| + =..+|++|+++|++|.++.
T Consensus 9 k~~lVTGas~~~G-I--G~aia~~la~~G~~V~~~~ 41 (297)
T 1d7o_A 9 KRAFIAGIADDNG-Y--GWAVAKSLAAAGAEILVGT 41 (297)
T ss_dssp CEEEEECCSSSSS-H--HHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCCCC-h--HHHHHHHHHHCCCeEEEee
Confidence 455566443 32 2 2578999999999998864
No 467
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=31.65 E-value=39 Score=23.12 Aligned_cols=33 Identities=9% Similarity=-0.034 Sum_probs=24.0
Q ss_pred CCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 3 SPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
+.+|.++-....|. .+|+.|+++||+|+++...
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECSS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeCC
Confidence 34788875444453 5788999999999988544
No 468
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=31.58 E-value=39 Score=22.88 Aligned_cols=33 Identities=9% Similarity=0.107 Sum_probs=22.7
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++|++.- +.|-+- ..|+++|.++|++|+.+.-.
T Consensus 3 ~~vlVtG--atG~iG--~~l~~~L~~~g~~V~~~~r~ 35 (311)
T 3m2p_A 3 LKIAVTG--GTGFLG--QYVVESIKNDGNTPIILTRS 35 (311)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEC--CCcHHH--HHHHHHHHhCCCEEEEEeCC
Confidence 4666665 334332 36789999999999988654
No 469
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=31.55 E-value=31 Score=22.84 Aligned_cols=19 Identities=16% Similarity=0.205 Sum_probs=15.6
Q ss_pred HHHHHHHHHCCCeEEEEeC
Q 040997 21 LEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t 39 (128)
..++++|+++|++|.++.-
T Consensus 15 ~~ia~~l~~~G~~V~~~~r 33 (254)
T 1zmt_A 15 MGSALRLSEAGHTVACHDE 33 (254)
T ss_dssp HHHHHHHHHTTCEEEECCG
T ss_pred HHHHHHHHHCCCEEEEEeC
Confidence 5789999999999887643
No 470
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=31.49 E-value=48 Score=23.98 Aligned_cols=25 Identities=12% Similarity=0.398 Sum_probs=21.5
Q ss_pred hHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 17 VIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 17 ~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
.-+|.+|-+.|.++|++|-+++...
T Consensus 223 ~p~~~eLi~~L~~~G~~v~IVSgg~ 247 (385)
T 4gxt_A 223 LDEMVDLYRSLEENGIDCYIVSASF 247 (385)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCeEEEEcCCc
Confidence 4689999999999999988877654
No 471
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=31.46 E-value=43 Score=22.39 Aligned_cols=20 Identities=25% Similarity=0.223 Sum_probs=16.4
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|.++.-.
T Consensus 35 ~aia~~l~~~G~~V~~~~r~ 54 (273)
T 1ae1_A 35 YAIVEELAGLGARVYTCSRN 54 (273)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999887543
No 472
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=31.45 E-value=40 Score=22.74 Aligned_cols=20 Identities=30% Similarity=0.298 Sum_probs=16.2
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|+++.-.
T Consensus 43 ~aia~~L~~~G~~V~~~~r~ 62 (276)
T 2b4q_A 43 QMIAQGLLEAGARVFICARD 62 (276)
T ss_dssp HHHHHHHHHTTCEEEEECSC
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 57899999999998887543
No 473
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=31.43 E-value=32 Score=21.34 Aligned_cols=29 Identities=14% Similarity=0.267 Sum_probs=18.5
Q ss_pred HHHHHHHhcCCCCCccEEEeCCCccc--HHHHHH
Q 040997 94 EKLIEEINSREDEKIDCFIADGNMGW--SLEVAK 125 (128)
Q Consensus 94 ~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~vA~ 125 (128)
++.++.+.+ .+||+||.|..++- +.++++
T Consensus 41 ~~al~~~~~---~~~dlvl~D~~lp~~~g~~~~~ 71 (184)
T 3rqi_A 41 DEALKLAGA---EKFEFITVXLHLGNDSGLSLIA 71 (184)
T ss_dssp HHHHHHHTT---SCCSEEEECSEETTEESHHHHH
T ss_pred HHHHHHHhh---CCCCEEEEeccCCCccHHHHHH
Confidence 455555543 57999999987653 344443
No 474
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=31.41 E-value=43 Score=22.72 Aligned_cols=31 Identities=19% Similarity=0.296 Sum_probs=21.8
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEe
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~ 38 (128)
++++|.-.+.| + =..++++|+++|++|+++.
T Consensus 10 k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 10 PVALVTGAAKR-L--GRSIAEGLHAEGYAVCLHY 40 (291)
T ss_dssp CEEEETTCSSH-H--HHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCch-H--HHHHHHHHHHCCCeEEEEc
Confidence 45666644332 2 3578999999999998876
No 475
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=31.40 E-value=44 Score=22.44 Aligned_cols=33 Identities=21% Similarity=0.392 Sum_probs=21.8
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.-.+.| + =..+|++|+++|++|.++.-.
T Consensus 7 k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~r~ 39 (274)
T 3e03_A 7 KTLFITGASRG-I--GLAIALRAARDGANVAIAAKS 39 (274)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred cEEEEECCCCh-H--HHHHHHHHHHCCCEEEEEecc
Confidence 45555533332 2 257889999999999887543
No 476
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=31.31 E-value=78 Score=21.36 Aligned_cols=34 Identities=18% Similarity=0.377 Sum_probs=26.5
Q ss_pred eEEEEc--CCCcCChHHHHHHHHHHHHCCCeEEEEe
Q 040997 5 HVLVMP--GPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (128)
Q Consensus 5 hvl~~p--~p~~GH~~P~l~la~~L~~rG~~Vt~~~ 38 (128)
+.+++. -.+.|=-.=.+.|++.|.++|.+|.++-
T Consensus 27 ~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fK 62 (251)
T 3fgn_A 27 TILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCK 62 (251)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Confidence 445554 3345888888999999999999999974
No 477
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A*
Probab=31.29 E-value=49 Score=22.97 Aligned_cols=36 Identities=17% Similarity=0.278 Sum_probs=25.9
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCC------------CeEEEEeCcc
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHG------------FRVTFVNTDY 41 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG------------~~Vt~~~t~~ 41 (128)
.+++++. .|.| +.|++.+.+.+..++ .+|+++-...
T Consensus 171 ~~vvlIA-gGtG-IaP~~sil~~l~~~~~~~~~~~~~~~~~~v~L~~g~R 218 (316)
T 3jqq_A 171 TNFIFIA-TGTG-ISPYISFLKKLFAYDKNNLYNRNSNYTGYITIYYGVY 218 (316)
T ss_dssp CCEEEEE-EGGG-GHHHHHHHHHHTTCCGGGTTCCCCCCCCCEEEEEEES
T ss_pred CcEEEEe-CCce-echHHHHHHHHHHhccccccccccCCCCcEEEEEEec
Confidence 3566665 4555 899999999999765 5788865543
No 478
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=31.29 E-value=34 Score=24.09 Aligned_cols=31 Identities=29% Similarity=0.388 Sum_probs=21.4
Q ss_pred CeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 4 PHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 4 ~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
..|++|-....| +..|..|+++|++|+++=-
T Consensus 5 ~DVvIIGaG~~G-----l~~A~~La~~G~~V~vlE~ 35 (397)
T 2oln_A 5 YDVVVVGGGPVG-----LATAWQVAERGHRVLVLER 35 (397)
T ss_dssp EEEEEECCSHHH-----HHHHHHHHHTTCCEEEEES
T ss_pred CCEEEECCCHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 356666533333 5578889999999999843
No 479
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=31.27 E-value=64 Score=21.07 Aligned_cols=31 Identities=13% Similarity=0.183 Sum_probs=26.2
Q ss_pred CCCcCChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 11 GPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 11 ~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
-+|.|=-.-...||..|+++|.+|-++=...
T Consensus 11 kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 11 KGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp STTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 4566889999999999999999998875543
No 480
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=31.22 E-value=87 Score=23.29 Aligned_cols=38 Identities=13% Similarity=0.078 Sum_probs=30.4
Q ss_pred CCeEEEEcCCCcCCh-----HHHHHHHHHHHHCCCeEEEEeCc
Q 040997 3 SPHVLVMPGPAQGHV-----IPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 3 ~~hvl~~p~p~~GH~-----~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
..+|+++-+.+-... .|.+.+.++|..+|.+|.+.=+.
T Consensus 328 ~~~v~vlGlafK~~~dD~R~Sp~~~i~~~L~~~g~~v~~~DP~ 370 (478)
T 2y0c_A 328 GRTFAIWGLAFKPNTDDMREAPSRELIAELLSRGARIAAYDPV 370 (478)
T ss_dssp TCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECTT
T ss_pred CCEEEEEecccCCCCCccccChHHHHHHHHHHCCCEEEEECCC
Confidence 457888877776555 49999999999999999886554
No 481
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=31.20 E-value=44 Score=22.48 Aligned_cols=20 Identities=30% Similarity=0.298 Sum_probs=16.3
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|..+.-.
T Consensus 42 ~~la~~l~~~G~~V~~~~r~ 61 (286)
T 1xu9_A 42 REMAYHLAKMGAHVVVTARS 61 (286)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEECC
Confidence 57889999999998887543
No 482
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=31.18 E-value=40 Score=22.71 Aligned_cols=33 Identities=15% Similarity=0.239 Sum_probs=22.5
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|...+. =+ =..+|++|+++|++|.++.-.
T Consensus 34 k~~lVTGas~-GI--G~aia~~la~~G~~V~~~~r~ 66 (275)
T 4imr_A 34 RTALVTGSSR-GI--GAAIAEGLAGAGAHVILHGVK 66 (275)
T ss_dssp CEEEETTCSS-HH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCC-HH--HHHHHHHHHHCCCEEEEEcCC
Confidence 5666664433 22 257899999999999887543
No 483
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=31.17 E-value=41 Score=22.16 Aligned_cols=32 Identities=22% Similarity=0.250 Sum_probs=21.0
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
++++|.-.+. -+ =..++++|+++|++|.++.-
T Consensus 7 k~vlVTGas~-gI--G~a~a~~l~~~G~~V~~~~r 38 (247)
T 3rwb_A 7 KTALVTGAAQ-GI--GKAIAARLAADGATVIVSDI 38 (247)
T ss_dssp CEEEEETTTS-HH--HHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCC-HH--HHHHHHHHHHCCCEEEEEeC
Confidence 4555553332 22 24789999999999887644
No 484
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=31.09 E-value=41 Score=22.57 Aligned_cols=31 Identities=19% Similarity=0.207 Sum_probs=21.5
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEe
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~ 38 (128)
++++|.-.+. -+ =..+|++|+++|++|.++.
T Consensus 12 k~~lVTGas~-GI--G~a~a~~la~~G~~V~~~~ 42 (277)
T 3tsc_A 12 RVAFITGAAR-GQ--GRAHAVRMAAEGADIIAVD 42 (277)
T ss_dssp CEEEEESTTS-HH--HHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCcc-HH--HHHHHHHHHHcCCEEEEEe
Confidence 5566664333 22 2578999999999998874
No 485
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=31.04 E-value=40 Score=22.55 Aligned_cols=34 Identities=15% Similarity=0.210 Sum_probs=22.1
Q ss_pred eEEEEcCCCc-CChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQ-GHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~-GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|...+. |-+- ..++++|+++|++|.++.-.
T Consensus 7 k~vlVTGas~~~gIG--~~~a~~l~~~G~~V~~~~r~ 41 (275)
T 2pd4_A 7 KKGLIVGVANNKSIA--YGIAQSCFNQGATLAFTYLN 41 (275)
T ss_dssp CEEEEECCCSTTSHH--HHHHHHHHTTTCEEEEEESS
T ss_pred CEEEEECCCCCCcHH--HHHHHHHHHCCCEEEEEeCC
Confidence 4455553321 3332 57899999999999887543
No 486
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=31.03 E-value=40 Score=22.90 Aligned_cols=33 Identities=21% Similarity=0.334 Sum_probs=22.5
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.-.+.| + =..++++|+++|++|.++.-.
T Consensus 48 k~vlVTGas~G-I--G~aia~~la~~G~~V~~~~r~ 80 (291)
T 3ijr_A 48 KNVLITGGDSG-I--GRAVSIAFAKEGANIAIAYLD 80 (291)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCcH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 45566644332 2 257899999999999887554
No 487
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=31.03 E-value=54 Score=21.28 Aligned_cols=41 Identities=17% Similarity=0.083 Sum_probs=28.5
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHC-CCeEEEEeCcch
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKH-GFRVTFVNTDYY 42 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~r-G~~Vt~~~t~~~ 42 (128)
|...+|+++-+++.--+. +...+..|.++ |++|++++....
T Consensus 1 M~m~kV~ill~~g~~~~E-~~~~~~~l~~~~~~~v~~vs~~~~ 42 (206)
T 3f5d_A 1 MSLKKALFLILDQYADWE-GVYLASALNQREDWSVHTVSLDPI 42 (206)
T ss_dssp --CEEEEEECCSSBCTTT-SHHHHHHHHTSTTEEEEEEESSSE
T ss_pred CCccEEEEEEcCCCcHHH-HHHHHHHHhccCCeEEEEEECCCC
Confidence 555688888888876553 33556677776 999999987653
No 488
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=30.99 E-value=35 Score=23.77 Aligned_cols=31 Identities=19% Similarity=0.280 Sum_probs=20.9
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
.|++|-....| +..|..|+++|++|+++--.
T Consensus 19 dvvIIGgG~~G-----l~~A~~La~~G~~V~llE~~ 49 (382)
T 1ryi_A 19 EAVVIGGGIIG-----SAIAYYLAKENKNTALFESG 49 (382)
T ss_dssp EEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECcCHHH-----HHHHHHHHhCCCcEEEEeCC
Confidence 45665432223 56778888999999998543
No 489
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=30.99 E-value=41 Score=22.70 Aligned_cols=20 Identities=15% Similarity=0.200 Sum_probs=16.6
Q ss_pred HHHHHHHHHCCCeEEEEeCc
Q 040997 21 LEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 21 l~la~~L~~rG~~Vt~~~t~ 40 (128)
..++++|+++|++|.++.-.
T Consensus 46 ~aia~~la~~G~~V~~~~r~ 65 (276)
T 3r1i_A 46 KKVALAYAEAGAQVAVAARH 65 (276)
T ss_dssp HHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999887553
No 490
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=30.91 E-value=36 Score=23.18 Aligned_cols=30 Identities=20% Similarity=0.366 Sum_probs=20.8
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
.|++|-....| +.+|..|+++|.+|+++=-
T Consensus 4 dV~IIGaG~~G-----l~~A~~L~~~G~~V~vlE~ 33 (336)
T 1yvv_A 4 PIAIIGTGIAG-----LSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp CEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred eEEEECCcHHH-----HHHHHHHHHCCCcEEEEEC
Confidence 46666533223 5678899999999999843
No 491
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=30.91 E-value=15 Score=25.94 Aligned_cols=17 Identities=18% Similarity=0.444 Sum_probs=14.3
Q ss_pred cCChHHHHHHHHHHHHC
Q 040997 14 QGHVIPLLEFSQCLAKH 30 (128)
Q Consensus 14 ~GH~~P~l~la~~L~~r 30 (128)
.||+||.+-|+-.+..+
T Consensus 71 GaHlNPAVTla~~~~g~ 87 (301)
T 2zz9_A 71 GGHINPAVTVAMVCTRK 87 (301)
T ss_dssp CCCCSHHHHHHHHHTSS
T ss_pred cceeChHHHHHHHHhcC
Confidence 48999999999887654
No 492
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=30.83 E-value=1e+02 Score=19.45 Aligned_cols=40 Identities=18% Similarity=0.202 Sum_probs=27.7
Q ss_pred CCCCeEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 1 MSSPHVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 1 m~~~hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
|...+|+++-+++.- ..-+......|...|++|++++...
T Consensus 1 mm~~~v~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 40 (197)
T 2rk3_A 1 MASKRALVILAKGAE-EMETVIPVDVMRRAGIKVTVAGLAG 40 (197)
T ss_dssp -CCCEEEEEECTTCC-HHHHHHHHHHHHHTTCEEEEEETTC
T ss_pred CCCCEEEEEECCCCc-HHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 555688888877654 3344555667788899999998653
No 493
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=30.82 E-value=41 Score=22.76 Aligned_cols=33 Identities=18% Similarity=0.328 Sum_probs=22.4
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTD 40 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~ 40 (128)
++++|.-.+. =+ =..+|++|+++|++|.++.-.
T Consensus 34 k~~lVTGas~-GI--G~aia~~la~~G~~V~~~~r~ 66 (281)
T 4dry_A 34 RIALVTGGGT-GV--GRGIAQALSAEGYSVVITGRR 66 (281)
T ss_dssp CEEEETTTTS-HH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCC-HH--HHHHHHHHHHCCCEEEEEECC
Confidence 4666664333 22 257899999999998887543
No 494
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=30.69 E-value=41 Score=22.61 Aligned_cols=31 Identities=26% Similarity=0.319 Sum_probs=22.0
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEe
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVN 38 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~ 38 (128)
++++|.-.+.| + =..+|++|+++|++|.++.
T Consensus 12 k~~lVTGas~g-I--G~aia~~la~~G~~V~~~~ 42 (286)
T 3uve_A 12 KVAFVTGAARG-Q--GRSHAVRLAQEGADIIAVD 42 (286)
T ss_dssp CEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCch-H--HHHHHHHHHHCCCeEEEEe
Confidence 56666644432 2 3578999999999998874
No 495
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=30.67 E-value=1.1e+02 Score=19.80 Aligned_cols=32 Identities=16% Similarity=0.118 Sum_probs=21.7
Q ss_pred CeEEEEcCCCcCC----hHHHHHHHHHHHHCCCeEEE
Q 040997 4 PHVLVMPGPAQGH----VIPLLEFSQCLAKHGFRVTF 36 (128)
Q Consensus 4 ~hvl~~p~p~~GH----~~P~l~la~~L~~rG~~Vt~ 36 (128)
+.|.++.... +. ..-..+|++.|+++|+.|.+
T Consensus 14 ~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~ 49 (189)
T 3sbx_A 14 WTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVW 49 (189)
T ss_dssp CEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred eEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEE
Confidence 4677777544 33 34567888888999987443
No 496
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=30.52 E-value=42 Score=22.65 Aligned_cols=32 Identities=22% Similarity=0.370 Sum_probs=21.8
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeC
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNT 39 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t 39 (128)
++++|.-.+.| + =..++++|+++|++|.++.-
T Consensus 6 k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~r 37 (281)
T 3zv4_A 6 EVALITGGASG-L--GRALVDRFVAEGARVAVLDK 37 (281)
T ss_dssp CEEEEETCSSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcH-H--HHHHHHHHHHCcCEEEEEeC
Confidence 45666644332 2 25789999999999988754
No 497
>1r6t_A Tryptophanyl-tRNA synthetase; class IC tRNA synthetase, rossmann fold catalytical domain, recognition domain, bound Trp-AMP, ligase; HET: TYM; 2.10A {Homo sapiens} SCOP: a.16.1.3 c.26.1.1 PDB: 2azx_A* 2quh_A* 2qui_A* 2quj_A* 2quk_A
Probab=30.43 E-value=36 Score=25.57 Aligned_cols=27 Identities=26% Similarity=0.415 Sum_probs=21.5
Q ss_pred CChHHHHHHHHHHHH-CCCeEEEEeCcch
Q 040997 15 GHVIPLLEFSQCLAK-HGFRVTFVNTDYY 42 (128)
Q Consensus 15 GH~~P~l~la~~L~~-rG~~Vt~~~t~~~ 42 (128)
||+.|++- .+.|+. .||++.++.+...
T Consensus 172 Gh~v~~~~-~~~lQ~~~g~~~iilI~D~~ 199 (477)
T 1r6t_A 172 GHLIPFIF-TKWLQDVFNVPLVIQMTDDE 199 (477)
T ss_dssp GGHHHHHH-HHHHHHHHTCCEEEEECHHH
T ss_pred HHHHHHHH-HHHHHHHhCCcEEEEEecce
Confidence 99999874 456887 8999999887644
No 498
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=30.42 E-value=46 Score=18.64 Aligned_cols=11 Identities=18% Similarity=0.289 Sum_probs=6.7
Q ss_pred CccEEEeCCCc
Q 040997 107 KIDCFIADGNM 117 (128)
Q Consensus 107 ~~d~vI~D~~~ 117 (128)
+||+||.|..+
T Consensus 47 ~~dlvl~D~~l 57 (124)
T 1srr_A 47 RPDLVLLDMKI 57 (124)
T ss_dssp CCSEEEEESCC
T ss_pred CCCEEEEecCC
Confidence 46666666544
No 499
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=30.42 E-value=36 Score=21.95 Aligned_cols=32 Identities=16% Similarity=0.383 Sum_probs=22.4
Q ss_pred eEEEEcCCCcCChHHHHHHHHHHHHCCCeEEEEeCcc
Q 040997 5 HVLVMPGPAQGHVIPLLEFSQCLAKHGFRVTFVNTDY 41 (128)
Q Consensus 5 hvl~~p~p~~GH~~P~l~la~~L~~rG~~Vt~~~t~~ 41 (128)
+|+++-+ |.+ -..+++.|..+|++|+++....
T Consensus 2 ~iiIiG~---G~~--G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGG---ETT--AYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECC---HHH--HHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECC---CHH--HHHHHHHHHhCCCeEEEEECCH
Confidence 4555542 433 2478999999999999987653
No 500
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=30.42 E-value=46 Score=18.43 Aligned_cols=22 Identities=18% Similarity=0.030 Sum_probs=14.2
Q ss_pred HHHHHHHhcCCCCCccEEEeCCCcc
Q 040997 94 EKLIEEINSREDEKIDCFIADGNMG 118 (128)
Q Consensus 94 ~~ll~~l~~~~~~~~d~vI~D~~~~ 118 (128)
++.++.+.+ .+||++|.|..++
T Consensus 34 ~~a~~~~~~---~~~dlil~D~~l~ 55 (121)
T 2pl1_A 34 KEADYYLNE---HIPDIAIVDLGLP 55 (121)
T ss_dssp HHHHHHHHH---SCCSEEEECSCCS
T ss_pred HHHHHHHhc---cCCCEEEEecCCC
Confidence 334444433 4789999998664
Done!