Your job contains 1 sequence.
>040998
TSDKIDSMVAWIKLSNMPHYYYHKKVLPMVGQVMGEVIHIDFNTRSASRRKFVRIAVKIA
LDKPLCLQFLLDGRIQKVEYESLPINCFNCGKYGHVSIGCPENGDGEEPQDENGKKT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040998
(117 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2045756 - symbol:AT2G01050 species:3702 "Arabi... 193 2.0e-14 1
TAIR|locus:1009023409 - symbol:AT5G36228 species:3702 "Ar... 131 5.3e-08 1
TAIR|locus:2099826 - symbol:AT3G31430 "AT3G31430" species... 117 1.6e-06 1
TAIR|locus:1006230619 - symbol:AT5G18636 "AT5G18636" spec... 104 4.8e-05 1
TAIR|locus:2146990 - symbol:AT5G25200 "AT5G25200" species... 104 4.8e-05 1
TAIR|locus:2827815 - symbol:AT2G17920 species:3702 "Arabi... 102 5.8e-05 1
TAIR|locus:4515102790 - symbol:AT2G02103 "AT2G02103" spec... 99 0.00019 1
TAIR|locus:2076106 - symbol:AT3G24070 species:3702 "Arabi... 93 0.00042 1
UNIPROTKB|F8VXY6 - symbol:ZCRB1 "Zinc finger CCHC-type an... 87 0.00045 1
TAIR|locus:2062652 - symbol:AT2G41590 "AT2G41590" species... 95 0.00045 1
UNIPROTKB|G3V1V1 - symbol:ZCRB1 "Zinc finger CCHC-type an... 87 0.00077 1
>TAIR|locus:2045756 [details] [associations]
symbol:AT2G01050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 SMART:SM00343 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0008270 GO:GO:0003676
eggNOG:KOG1075 EMBL:AC006837 InterPro:IPR025558 InterPro:IPR025836
Pfam:PF14111 Pfam:PF14392 IPI:IPI00537469 PIR:A84420
RefSeq:NP_178215.1 UniGene:At.66149 PRIDE:Q9SJW1
EnsemblPlants:AT2G01050.1 GeneID:814629 KEGG:ath:AT2G01050
TAIR:At2g01050 InParanoid:Q9SJW1 PhylomeDB:Q9SJW1
Genevestigator:Q9SJW1 Uniprot:Q9SJW1
Length = 515
Score = 193 (73.0 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 36/101 (35%), Positives = 59/101 (58%)
Query: 3 DKIDSMVAWIKLSNMPHYYYHKKVLPMVGQVMGEVIHIDFNTRSASRRKFVRIAVKIALD 62
D I + W++LSN+P+ YYH+ +L + + +G + +D NT + + +F R+ +++ L
Sbjct: 159 DDIVTTPVWVRLSNIPYNYYHRCLLMEIARGLGRPLKVDMNTINFDKGRFARVCIEVNLA 218
Query: 63 KPLCLQFLLDGRIQKVEYESLPINCFNCGKYGHVSIGCPEN 103
KPL L++G V YE L C +CG YGH+ CP N
Sbjct: 219 KPLKGTVLINGDRYFVAYEGLSKICSSCGIYGHLVHSCPRN 259
>TAIR|locus:1009023409 [details] [associations]
symbol:AT5G36228 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 SMART:SM00343 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0008270 GO:GO:0003676 EMBL:AB026661
eggNOG:KOG1075 HOGENOM:HOG000114065 InterPro:IPR025558
InterPro:IPR025836 Pfam:PF14111 Pfam:PF14392 EMBL:DQ487609
IPI:IPI00547135 RefSeq:NP_001031973.1 UniGene:At.63332
UniGene:At.73257 EnsemblPlants:AT5G36228.1 GeneID:3771323
KEGG:ath:AT5G36228 TAIR:At5g36228 PhylomeDB:Q9FG64
ProtClustDB:CLSN2679551 Genevestigator:Q9FG64 Uniprot:Q9FG64
Length = 361
Score = 131 (51.2 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 32/117 (27%), Positives = 56/117 (47%)
Query: 1 TSDKIDSMVAWIKLSNMPHYYYHKKVLPMVGQVMGEVIHIDFNTRSASRRKFVRIAVKIA 60
T D + + W+ + +P Y ++ + ++ +GEV+ +DFN + S+ F+R+ V++
Sbjct: 114 TEDFLTFIDVWVHIRGIPLPYVSERTVEIIASTLGEVVAMDFNEETTSQITFIRVKVRMD 173
Query: 61 LDKPLC----LQFLLDGRIQ-KVEYESLPINCFNCGKYGHVSIGCPENGDGEEPQDE 112
+PL ++F R EYE L C NC + H CP EE +E
Sbjct: 174 FTEPLRFFRRVRFASRERAMIGFEYEKLQRVCTNCCRVNHQVSHCPYVVHQEEMDNE 230
>TAIR|locus:2099826 [details] [associations]
symbol:AT3G31430 "AT3G31430" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002686 InterPro:IPR025558
InterPro:IPR025836 Pfam:PF14111 Pfam:PF14392 IPI:IPI00522365
RefSeq:NP_189728.1 UniGene:At.65202 PRIDE:F4J922
EnsemblPlants:AT3G31430.1 GeneID:822909 KEGG:ath:AT3G31430
ArrayExpress:F4J922 Uniprot:F4J922
Length = 336
Score = 117 (46.2 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 28/108 (25%), Positives = 49/108 (45%)
Query: 11 WIKLSNMPHYYYHKKVLPMVGQVMGEVIHIDFNTRSASRRKFVRIAVKIALDKPLCLQ-- 68
W+++ +P + ++ V+ +G+ +G+V+ DFN +R F R+ + + PL Q
Sbjct: 217 WVQIRGIPFQFLNRGVVEHIGRALGQVLDTDFNVEVVARMDFARVLLHWDITHPLRFQRH 276
Query: 69 FLLDGRIQ---KVEYESLPINCFNCGKYGHVSIGCPENGDGEEPQDEN 113
F + + YE L C CG H C GEE D++
Sbjct: 277 FQFTAGVNTLLRFRYERLRGFCEVCGMLTHDFGACLIQNGGEEQADDD 324
>TAIR|locus:1006230619 [details] [associations]
symbol:AT5G18636 "AT5G18636" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AC051627
HOGENOM:HOG000114065 InterPro:IPR025558 InterPro:IPR025836
Pfam:PF14111 Pfam:PF14392 UniGene:At.63153 UniGene:At.65549
ProtClustDB:CLSN2683786 EMBL:DQ446963 IPI:IPI00543941
RefSeq:NP_974806.1 EnsemblPlants:AT5G18636.1 GeneID:2745990
KEGG:ath:AT5G18636 TAIR:At5g18636 InParanoid:Q3E6T3
PhylomeDB:Q3E6T3 Genevestigator:Q3E6T3 Uniprot:Q3E6T3
Length = 367
Score = 104 (41.7 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 23/96 (23%), Positives = 50/96 (52%)
Query: 11 WIKLSNMPHYYYHKKVLPMVGQVMGEVIHIDFNTRSASRRKFVRIAVKIAL-DKPLCLQF 69
W+++ +P Y ++ + + Q +GE+I +DF+ ++ + F+R+ V+ + D+ Q
Sbjct: 124 WVQIRGIPLPYVSEETVLEIAQDLGEIISLDFHEATSPQIAFIRVRVRFGITDRLRFFQR 183
Query: 70 LL--DGRIQKV--EYESLPINCFNCGKYGHVSIGCP 101
++ G + +YE L C +C ++ H CP
Sbjct: 184 IIFDSGETATIRFQYERLRRLCSSCFRFTHNRAYCP 219
>TAIR|locus:2146990 [details] [associations]
symbol:AT5G25200 "AT5G25200" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 InterPro:IPR025558 InterPro:IPR025836
Pfam:PF14111 Pfam:PF14392 IPI:IPI00541159 RefSeq:NP_197902.1
UniGene:At.63153 UniGene:At.65549 EnsemblPlants:AT5G25200.1
GeneID:832591 KEGG:ath:AT5G25200 PhylomeDB:F4JWP5 Uniprot:F4JWP5
Length = 367
Score = 104 (41.7 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 23/96 (23%), Positives = 50/96 (52%)
Query: 11 WIKLSNMPHYYYHKKVLPMVGQVMGEVIHIDFNTRSASRRKFVRIAVKIAL-DKPLCLQF 69
W+++ +P Y ++ + + Q +GE+I +DF+ ++ + F+R+ V+ + D+ Q
Sbjct: 124 WVQIRGIPLPYVSEETVLEIAQDLGEIISLDFHEATSPQIAFIRVRVRFGITDRLRFFQR 183
Query: 70 LL--DGRIQKV--EYESLPINCFNCGKYGHVSIGCP 101
++ G + +YE L C +C ++ H CP
Sbjct: 184 IIFDSGETATIRFQYERLRRLCSSCFRFTHNRAYCP 219
>TAIR|locus:2827815 [details] [associations]
symbol:AT2G17920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 SMART:SM00343 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0008270 GO:GO:0003676
HOGENOM:HOG000114065 InterPro:IPR025558 InterPro:IPR025836
Pfam:PF14111 Pfam:PF14392 eggNOG:NOG265144 EMBL:AY649250
IPI:IPI00535595 RefSeq:NP_179382.2 UniGene:At.40081
UniGene:At.73234 EnsemblPlants:AT2G17920.1 GeneID:816302
KEGG:ath:AT2G17920 TAIR:At2g17920 InParanoid:Q6DR65 OMA:SSAMHTI
PhylomeDB:Q6DR65 Genevestigator:Q6DR65 Uniprot:Q6DR65
Length = 307
Score = 102 (41.0 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 21/96 (21%), Positives = 49/96 (51%)
Query: 11 WIKLSNMPHYYYHKKVLPMVGQVMGEVIHIDFNTRSASRRKFVRIAVKIALDKPL-CLQF 69
W+++ +P Y ++ + Q +G +I +DF+ ++++ ++R+ V++ + L Q
Sbjct: 124 WVQMRGIPFLYVSEETALEIAQEIGAIISLDFHDTTSTQIAYIRVRVRVGITDSLRFFQR 183
Query: 70 LL----DGRIQKVEYESLPINCFNCGKYGHVSIGCP 101
+ + + + +YE L C NC ++ H CP
Sbjct: 184 ITFESGESALIRFQYERLRRICSNCFRFTHNRNYCP 219
>TAIR|locus:4515102790 [details] [associations]
symbol:AT2G02103 "AT2G02103" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002685 InterPro:IPR025558 InterPro:IPR025836
Pfam:PF14111 Pfam:PF14392 eggNOG:NOG265144 ProtClustDB:CLSN2683786
EMBL:DQ487507 IPI:IPI00775686 RefSeq:NP_001118255.1
UniGene:At.69166 EnsemblPlants:AT2G02103.1 GeneID:6240480
KEGG:ath:AT2G02103 TAIR:At2g02103 OMA:VILREYD PhylomeDB:Q1G3S7
Genevestigator:Q1G3S7 Uniprot:Q1G3S7
Length = 403
Score = 99 (39.9 bits), Expect = 0.00019, P = 0.00019
Identities = 22/96 (22%), Positives = 49/96 (51%)
Query: 11 WIKLSNMPHYYYHKKVLPMVGQVMGEVIHIDFNTRSASRRKFVRIAVKIAL-DKPLCLQF 69
W+++ +P Y ++ + + +GE+I +DF+ ++ + F+R+ V+ + D+ Q
Sbjct: 124 WVQIRGIPLPYVSEETVMEIAHDLGEIISLDFHEATSPQIAFIRVRVRFGITDRLRFFQR 183
Query: 70 LL--DGRIQKV--EYESLPINCFNCGKYGHVSIGCP 101
++ G + +YE L C +C ++ H CP
Sbjct: 184 VIFDSGETATIRFQYERLRRLCSSCFRFTHNRAYCP 219
>TAIR|locus:2076106 [details] [associations]
symbol:AT3G24070 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0008270 GO:GO:0003676
InterPro:IPR025558 InterPro:IPR025836 Pfam:PF14111 Pfam:PF14392
EMBL:AY054476 EMBL:BT006293 IPI:IPI00548141 RefSeq:NP_566743.1
UniGene:At.26478 EnsemblPlants:AT3G24070.1 GeneID:821993
KEGG:ath:AT3G24070 TAIR:At3g24070 eggNOG:NOG265872
HOGENOM:HOG000151154 OMA:IASSMGE ProtClustDB:CLSN2917246
Genevestigator:Q940K6 Uniprot:Q940K6
Length = 262
Score = 93 (37.8 bits), Expect = 0.00042, P = 0.00042
Identities = 25/101 (24%), Positives = 45/101 (44%)
Query: 11 WIKLSNMPHYYYHKKVLPMVGQVMGEVIHIDFNTRSASRRKFVRIAVKIALDKPLCLQFL 70
W+K+ +P Y + + MGEV+ ++ + VR V + +D LC + +
Sbjct: 2 WLKIRGIPIQYLCDGTVREIASSMGEVMEVELDDGMVDLSS-VRARVNVCVDTRLCFKKV 60
Query: 71 L---DGRIQKVE--YESLPIN------CFNCGKYGHVSIGC 100
G ++ V YE + ++ CFNCG H++ C
Sbjct: 61 ARFDSGEVKIVSFRYEDIGMSKARFKFCFNCGDMNHLARNC 101
>UNIPROTKB|F8VXY6 [details] [associations]
symbol:ZCRB1 "Zinc finger CCHC-type and RNA-binding
motif-containing protein 1" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR001878 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00098 PROSITE:PS50102 PROSITE:PS50158
SMART:SM00343 GO:GO:0000166 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003676 Gene3D:4.10.60.10 EMBL:AC079684
HGNC:HGNC:29620 IPI:IPI01021444 ProteinModelPortal:F8VXY6
SMR:F8VXY6 Ensembl:ENST00000552235 ArrayExpress:F8VXY6 Bgee:F8VXY6
Uniprot:F8VXY6
Length = 133
Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 44 TRSASRRK-FVR-IAVKIALDKPLCLQFLLDGRIQKVEYESLPINCFNCGKYGHVSIGCP 101
TR+ + ++ F R I IA+D +F I++ Y C+ CG+ GH+S CP
Sbjct: 27 TRAINNKQLFGRVIKASIAIDNGRAAEF-----IRRRNYFDKS-KCYECGESGHLSYACP 80
Query: 102 EN--GDGEEPQDENGKK 116
+N G+ E P+ + KK
Sbjct: 81 KNMLGEREPPKKKEKKK 97
>TAIR|locus:2062652 [details] [associations]
symbol:AT2G41590 "AT2G41590" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC002510
HOGENOM:HOG000114065 InterPro:IPR025558 InterPro:IPR025836
Pfam:PF14111 Pfam:PF14392 UniGene:At.42812 UniGene:At.48578
IPI:IPI00541907 PIR:T00815 RefSeq:NP_181690.1 UniGene:At.73243
EnsemblPlants:AT2G41590.1 GeneID:818757 KEGG:ath:AT2G41590
TAIR:At2g41590 eggNOG:NOG265144 InParanoid:O22221 OMA:LANGFIM
PhylomeDB:O22221 ProtClustDB:CLSN2683786 ArrayExpress:O22221
Genevestigator:O22221 Uniprot:O22221
Length = 367
Score = 95 (38.5 bits), Expect = 0.00045, P = 0.00045
Identities = 21/96 (21%), Positives = 50/96 (52%)
Query: 11 WIKLSNMPHYYYHKKVLPMVGQVMGEVIHIDFNTRSASRRKFVRIAVKIAL-DKPLCLQF 69
W+++ +P Y ++ + + Q +GEV+ +D++ ++ + ++R+ V+ + D+ Q
Sbjct: 124 WVQIRGIPLPYVSEETVMEIAQDLGEVLMLDYHDTTSIQIAYIRVRVRFGITDRLRFFQR 183
Query: 70 LL--DGRIQKV--EYESLPINCFNCGKYGHVSIGCP 101
++ G + +YE L C +C ++ H CP
Sbjct: 184 IVFDSGETATIRFQYERLRRICSSCFRFTHNRAYCP 219
>UNIPROTKB|G3V1V1 [details] [associations]
symbol:ZCRB1 "Zinc finger CCHC-type and RNA binding motif
1, isoform CRA_b" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR001878 InterPro:IPR012677
Pfam:PF00076 Pfam:PF00098 PROSITE:PS50102 PROSITE:PS50158
SMART:SM00343 GO:GO:0000166 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003676 EMBL:CH471111 Gene3D:4.10.60.10
EMBL:AC079684 UniGene:Hs.496279 HGNC:HGNC:29620
ProteinModelPortal:G3V1V1 SMR:G3V1V1 Ensembl:ENST00000552673
ArrayExpress:G3V1V1 Bgee:G3V1V1 Uniprot:G3V1V1
Length = 176
Score = 87 (35.7 bits), Expect = 0.00077, P = 0.00077
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 44 TRSASRRK-FVR-IAVKIALDKPLCLQFLLDGRIQKVEYESLPINCFNCGKYGHVSIGCP 101
TR+ + ++ F R I IA+D +F I++ Y C+ CG+ GH+S CP
Sbjct: 27 TRAINNKQLFGRVIKASIAIDNGRAAEF-----IRRRNYFDKS-KCYECGESGHLSYACP 80
Query: 102 EN--GDGEEPQDENGKK 116
+N G+ E P+ + KK
Sbjct: 81 KNMLGEREPPKKKEKKK 97
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.139 0.428 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 117 117 0.00091 102 3 11 22 0.49 30
29 0.46 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 11
No. of states in DFA: 582 (62 KB)
Total size of DFA: 138 KB (2085 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.28u 0.08s 13.36t Elapsed: 00:00:02
Total cpu time: 13.28u 0.08s 13.36t Elapsed: 00:00:02
Start: Thu May 9 16:01:07 2013 End: Thu May 9 16:01:09 2013