Query 041003
Match_columns 282
No_of_seqs 241 out of 1476
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 04:03:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041003.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041003hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ef1_A RNA polymerase II subun 100.0 3.3E-66 1.1E-70 487.4 19.7 275 2-281 17-441 (442)
2 3ef0_A RNA polymerase II subun 100.0 1.7E-65 5.7E-70 476.8 19.2 275 2-281 9-371 (372)
3 3qle_A TIM50P; chaperone, mito 100.0 4.5E-39 1.5E-43 276.2 11.6 150 8-190 31-190 (204)
4 2ght_A Carboxy-terminal domain 100.0 3.1E-35 1E-39 248.6 12.3 158 7-187 11-181 (181)
5 3shq_A UBLCP1; phosphatase, hy 100.0 6.8E-34 2.3E-38 259.5 7.3 146 8-188 137-310 (320)
6 2hhl_A CTD small phosphatase-l 100.0 7.4E-32 2.5E-36 230.4 12.1 148 7-170 24-184 (195)
7 3l3e_A DNA topoisomerase 2-bin 99.8 2.9E-21 9.8E-26 149.2 9.4 91 188-281 11-102 (107)
8 3l46_A Protein ECT2; alternati 99.8 1.5E-21 5E-26 151.6 2.5 96 181-281 10-105 (112)
9 2cou_A ECT2 protein; BRCT doma 99.8 2.3E-21 7.9E-26 150.3 2.3 92 185-281 5-96 (109)
10 3pa6_A Microcephalin; BRCT dom 99.8 4.4E-20 1.5E-24 142.4 9.4 93 187-281 2-95 (107)
11 2d8m_A DNA-repair protein XRCC 99.8 1.3E-19 4.6E-24 144.5 7.7 88 189-281 19-106 (129)
12 4id3_A DNA repair protein REV1 99.8 1.3E-18 4.3E-23 130.1 7.9 86 189-281 4-91 (92)
13 2ebw_A DNA repair protein REV1 99.7 1E-17 3.5E-22 126.7 6.8 86 189-281 9-95 (97)
14 1wf6_A Similar to S.pombe -RAD 99.7 4.1E-17 1.4E-21 130.5 9.6 97 179-281 27-126 (132)
15 3olc_X DNA topoisomerase 2-bin 99.7 3.7E-17 1.3E-21 147.9 8.1 92 185-281 192-284 (298)
16 3pc6_A DNA repair protein XRCC 99.7 1.4E-16 4.8E-21 121.8 9.6 88 190-281 5-94 (104)
17 1l0b_A BRCA1; TANDEM-BRCT, thr 99.6 1.1E-15 3.8E-20 132.6 7.7 89 190-281 2-94 (229)
18 2nte_A BARD-1, BRCA1-associate 99.6 2.7E-15 9.3E-20 128.7 7.7 85 194-281 1-86 (210)
19 1t15_A Breast cancer type 1 su 99.6 3.2E-15 1.1E-19 128.1 7.5 85 194-281 3-91 (214)
20 3sqd_A PAX-interacting protein 99.6 3.1E-15 1.1E-19 129.5 6.7 90 187-281 8-97 (219)
21 2etx_A Mediator of DNA damage 99.5 2.7E-14 9.3E-19 122.6 8.6 86 188-281 5-90 (209)
22 3olc_X DNA topoisomerase 2-bin 99.5 4.6E-14 1.6E-18 127.6 7.7 84 190-278 103-186 (298)
23 3al2_A DNA topoisomerase 2-bin 99.5 1.1E-13 3.6E-18 121.1 8.0 86 192-281 6-93 (235)
24 2jw5_A DNA polymerase lambda; 99.5 1.3E-13 4.6E-18 105.8 7.6 90 187-281 6-103 (106)
25 3u3z_A Microcephalin; DNA repa 99.4 3.6E-13 1.2E-17 114.8 7.5 83 195-281 11-94 (199)
26 3l41_A BRCT-containing protein 99.3 8.7E-13 3E-17 114.1 5.9 81 193-281 6-86 (220)
27 3ii6_X DNA ligase 4; XRCC4, NH 99.3 5.9E-12 2E-16 111.7 9.6 94 188-281 160-263 (263)
28 1kzy_C Tumor suppressor P53-bi 99.3 4.5E-12 1.5E-16 112.3 8.0 91 190-281 13-135 (259)
29 1l7b_A DNA ligase; BRCT, autos 99.3 5.4E-12 1.8E-16 94.3 7.1 76 190-270 5-80 (92)
30 2vxb_A DNA repair protein RHP9 99.3 7.8E-12 2.7E-16 109.6 8.8 87 191-280 1-115 (241)
31 2ep8_A Pescadillo homolog 1; A 99.3 5.1E-12 1.8E-16 95.9 6.3 81 189-280 9-100 (100)
32 3ii6_X DNA ligase 4; XRCC4, NH 99.3 8.5E-12 2.9E-16 110.7 8.1 90 185-280 3-94 (263)
33 2coe_A Deoxynucleotidyltransfe 99.2 4.4E-11 1.5E-15 93.3 10.0 90 190-282 18-114 (120)
34 2k6g_A Replication factor C su 99.2 5E-11 1.7E-15 91.7 9.4 80 189-271 29-108 (109)
35 2ebu_A Replication factor C su 99.2 8.1E-11 2.8E-15 90.8 9.3 78 190-270 20-97 (112)
36 1z56_C DNA ligase IV; DNA repa 99.2 9.2E-12 3.1E-16 110.3 3.7 92 188-281 156-261 (264)
37 3pc7_A DNA ligase 3; DNA repai 99.1 5.3E-11 1.8E-15 87.7 6.0 74 190-277 14-88 (88)
38 2cok_A Poly [ADP-ribose] polym 99.1 1.7E-10 5.7E-15 89.3 7.3 84 190-276 8-102 (113)
39 2dun_A POL MU, DNA polymerase 99.0 1.7E-09 5.9E-14 85.0 8.3 88 191-281 9-106 (133)
40 1l0b_A BRCA1; TANDEM-BRCT, thr 98.9 2.2E-09 7.4E-14 92.7 6.6 91 189-281 114-212 (229)
41 1z56_C DNA ligase IV; DNA repa 98.9 2.6E-10 8.7E-15 100.9 -0.0 89 190-281 3-100 (264)
42 1t15_A Breast cancer type 1 su 98.8 2E-09 7E-14 91.7 5.3 91 189-281 112-210 (214)
43 3u3z_A Microcephalin; DNA repa 98.7 5.6E-09 1.9E-13 88.7 4.7 81 189-281 116-197 (199)
44 1kzy_C Tumor suppressor P53-bi 98.7 2E-08 6.9E-13 88.7 8.0 90 189-280 152-250 (259)
45 2etx_A Mediator of DNA damage 98.6 9.4E-08 3.2E-12 81.6 6.7 87 190-281 113-201 (209)
46 2nte_A BARD-1, BRCA1-associate 98.5 6.8E-08 2.3E-12 82.3 4.3 84 190-277 102-209 (210)
47 2fpr_A Histidine biosynthesis 98.2 3.6E-06 1.2E-10 69.3 7.7 106 8-141 11-143 (176)
48 1dgs_A DNA ligase; AMP complex 98.2 2.7E-07 9.1E-12 91.1 0.0 77 190-271 585-661 (667)
49 2wm8_A MDP-1, magnesium-depend 98.1 2.2E-06 7.5E-11 70.9 5.0 122 9-143 25-149 (187)
50 2owo_A DNA ligase; protein-DNA 98.1 3.7E-07 1.3E-11 90.1 0.0 76 190-269 595-670 (671)
51 2pr7_A Haloacid dehalogenase/e 98.1 9.4E-07 3.2E-11 68.4 2.1 79 63-144 19-104 (137)
52 3ib6_A Uncharacterized protein 98.0 4E-06 1.4E-10 69.5 5.1 106 12-140 4-123 (189)
53 2vxb_A DNA repair protein RHP9 98.0 6E-06 2E-10 72.0 5.9 81 189-275 148-240 (241)
54 3l8h_A Putative haloacid dehal 98.0 9.6E-06 3.3E-10 66.1 6.3 101 12-142 2-129 (179)
55 3kzx_A HAD-superfamily hydrola 98.0 2.1E-05 7E-10 66.1 8.4 80 60-142 101-188 (231)
56 3sqd_A PAX-interacting protein 98.0 1.6E-05 5.5E-10 68.3 7.8 85 189-279 119-216 (219)
57 3kbb_A Phosphorylated carbohyd 98.0 4.4E-06 1.5E-10 69.8 3.9 79 61-142 83-168 (216)
58 3m9l_A Hydrolase, haloacid deh 97.9 2.9E-05 9.8E-10 64.3 8.3 83 59-142 67-155 (205)
59 2pib_A Phosphorylated carbohyd 97.9 8.7E-06 3E-10 66.9 4.2 79 61-142 83-168 (216)
60 2i6x_A Hydrolase, haloacid deh 97.8 7.9E-06 2.7E-10 67.8 3.2 81 60-143 87-179 (211)
61 4dcc_A Putative haloacid dehal 97.8 6E-06 2E-10 69.8 2.1 79 62-142 112-201 (229)
62 3um9_A Haloacid dehalogenase, 97.8 0.00011 3.9E-09 61.1 9.3 78 61-141 95-179 (230)
63 2gmw_A D,D-heptose 1,7-bisphos 97.7 4.4E-05 1.5E-09 64.4 6.6 104 8-141 22-158 (211)
64 3sd7_A Putative phosphatase; s 97.7 3.2E-05 1.1E-09 65.4 5.7 79 61-142 109-195 (240)
65 1zrn_A L-2-haloacid dehalogena 97.7 1.3E-05 4.4E-10 67.4 2.8 78 61-141 94-178 (232)
66 3iru_A Phoshonoacetaldehyde hy 97.7 2.1E-05 7.2E-10 67.7 3.4 80 61-142 110-197 (277)
67 3m1y_A Phosphoserine phosphata 97.7 3.1E-05 1.1E-09 64.2 4.2 79 61-142 74-169 (217)
68 3zvl_A Bifunctional polynucleo 97.6 8.5E-05 2.9E-09 69.6 7.4 108 7-141 54-184 (416)
69 2no4_A (S)-2-haloacid dehaloge 97.6 6.4E-05 2.2E-09 63.6 6.1 78 61-141 104-188 (240)
70 2oda_A Hypothetical protein ps 97.6 4.2E-05 1.5E-09 64.0 4.7 72 62-141 36-115 (196)
71 3mc1_A Predicted phosphatase, 97.6 4.2E-05 1.4E-09 63.8 4.7 79 61-142 85-170 (226)
72 1qq5_A Protein (L-2-haloacid d 97.6 3E-05 1E-09 66.5 3.2 77 61-141 92-174 (253)
73 2p9j_A Hypothetical protein AQ 97.6 7.7E-05 2.6E-09 59.8 5.2 101 11-142 9-111 (162)
74 3al2_A DNA topoisomerase 2-bin 97.5 5E-05 1.7E-09 65.9 3.0 87 190-280 133-227 (235)
75 3huf_A DNA repair and telomere 97.5 0.0002 6.9E-09 64.1 6.8 59 211-270 126-187 (325)
76 3nvb_A Uncharacterized protein 97.4 3.5E-05 1.2E-09 71.6 1.5 118 4-144 215-341 (387)
77 3t7k_A RTT107, regulator of TY 97.4 0.00046 1.6E-08 59.7 7.6 83 195-280 22-117 (256)
78 2b0c_A Putative phosphatase; a 97.3 1.6E-05 5.4E-10 65.5 -1.6 82 60-144 89-178 (206)
79 2i7d_A 5'(3')-deoxyribonucleot 97.3 1.5E-05 5.1E-10 66.1 -1.8 40 61-100 72-113 (193)
80 3dv9_A Beta-phosphoglucomutase 97.3 5.1E-05 1.7E-09 64.0 1.5 80 61-142 107-193 (247)
81 3nuq_A Protein SSM1, putative 97.3 0.00064 2.2E-08 59.0 8.5 79 61-142 141-233 (282)
82 4eze_A Haloacid dehalogenase-l 97.3 6.6E-05 2.3E-09 67.8 1.5 80 61-142 178-273 (317)
83 3bwv_A Putative 5'(3')-deoxyri 97.2 0.00092 3.1E-08 54.3 7.9 69 61-144 68-141 (180)
84 2o2x_A Hypothetical protein; s 97.2 0.00044 1.5E-08 58.2 5.9 102 10-141 30-164 (218)
85 4gns_A Chitin biosynthesis pro 97.1 0.0016 5.6E-08 53.2 7.8 95 182-276 151-248 (290)
86 4gib_A Beta-phosphoglucomutase 97.1 0.00014 4.6E-09 62.6 1.3 76 62-142 116-198 (250)
87 3mmz_A Putative HAD family hyd 97.0 0.0011 3.7E-08 54.2 5.8 99 12-142 13-113 (176)
88 3e8m_A Acylneuraminate cytidyl 96.9 0.0018 6.1E-08 51.7 6.4 101 11-142 4-106 (164)
89 3p96_A Phosphoserine phosphata 96.8 0.00046 1.6E-08 64.2 2.8 80 61-142 255-350 (415)
90 3oq0_A DBF4, protein DNA52; DD 96.7 0.0054 1.8E-07 48.9 7.9 79 191-269 19-113 (151)
91 2l42_A DNA-binding protein RAP 96.7 0.001 3.6E-08 49.1 3.5 82 190-281 9-94 (106)
92 3skx_A Copper-exporting P-type 96.7 0.0091 3.1E-07 51.1 10.1 41 62-102 144-185 (280)
93 4ap9_A Phosphoserine phosphata 96.7 0.00014 4.8E-09 59.2 -1.8 76 61-142 78-161 (201)
94 3l41_A BRCT-containing protein 96.6 0.0035 1.2E-07 53.6 6.7 90 189-281 110-214 (220)
95 2i33_A Acid phosphatase; HAD s 96.6 0.003 1E-07 55.2 6.3 120 8-142 56-183 (258)
96 1nnl_A L-3-phosphoserine phosp 96.6 0.0027 9.4E-08 52.9 5.6 45 61-105 85-131 (225)
97 2obb_A Hypothetical protein; s 96.5 0.012 4.2E-07 46.8 8.7 96 12-142 4-100 (142)
98 3oq4_A DBF4, protein DNA52; DD 96.5 0.0098 3.3E-07 46.5 7.9 73 195-267 7-94 (134)
99 1k1e_A Deoxy-D-mannose-octulos 96.4 0.0053 1.8E-07 50.0 6.3 100 12-142 9-110 (180)
100 3qbz_A DDK kinase regulatory s 96.3 0.0086 3E-07 48.1 6.8 73 191-263 57-145 (160)
101 2r8e_A 3-deoxy-D-manno-octulos 96.3 0.0065 2.2E-07 49.9 6.2 102 10-142 25-128 (188)
102 3mn1_A Probable YRBI family ph 96.2 0.0057 2E-07 50.4 5.5 101 11-142 19-121 (189)
103 2gfh_A Haloacid dehalogenase-l 96.2 0.0041 1.4E-07 53.7 4.6 77 61-140 120-202 (260)
104 3umb_A Dehalogenase-like hydro 96.2 0.0085 2.9E-07 49.7 6.4 79 61-142 98-183 (233)
105 3e58_A Putative beta-phosphogl 96.1 0.0069 2.4E-07 49.1 5.5 79 61-142 88-173 (214)
106 3n1u_A Hydrolase, HAD superfam 96.1 0.0012 4.1E-08 54.8 0.6 66 70-142 54-121 (191)
107 2nyv_A Pgpase, PGP, phosphogly 96.1 0.0071 2.4E-07 50.5 5.4 80 60-142 81-167 (222)
108 2ah5_A COG0546: predicted phos 96.0 0.0066 2.3E-07 50.2 5.0 79 61-142 83-165 (210)
109 2hi0_A Putative phosphoglycola 96.0 0.0075 2.6E-07 50.9 5.3 78 61-142 109-193 (240)
110 2hdo_A Phosphoglycolate phosph 96.0 0.0076 2.6E-07 49.3 5.1 79 61-142 82-166 (209)
111 3qnm_A Haloacid dehalogenase-l 96.0 0.0089 3E-07 49.5 5.5 78 61-141 106-189 (240)
112 3s6j_A Hydrolase, haloacid deh 95.9 0.011 3.9E-07 48.7 5.7 79 61-142 90-175 (233)
113 3ed5_A YFNB; APC60080, bacillu 95.8 0.012 4.1E-07 48.7 5.7 78 61-141 102-186 (238)
114 2hsz_A Novel predicted phospha 95.8 0.011 3.8E-07 50.1 5.3 79 61-142 113-198 (243)
115 3ij5_A 3-deoxy-D-manno-octulos 95.7 0.013 4.4E-07 49.5 5.5 101 11-142 49-151 (211)
116 2hoq_A Putative HAD-hydrolase 95.7 0.0084 2.9E-07 50.4 4.2 78 61-141 93-177 (241)
117 3ocu_A Lipoprotein E; hydrolas 95.7 0.014 4.7E-07 51.2 5.6 115 8-144 55-186 (262)
118 4ex6_A ALNB; modified rossman 95.5 0.013 4.4E-07 48.8 4.7 79 61-142 103-188 (237)
119 1rku_A Homoserine kinase; phos 95.5 0.011 3.8E-07 48.4 4.1 80 61-142 68-156 (206)
120 3pct_A Class C acid phosphatas 95.4 0.055 1.9E-06 47.3 8.4 113 10-144 57-186 (260)
121 1yns_A E-1 enzyme; hydrolase f 95.3 0.017 5.7E-07 50.0 4.8 79 61-142 129-215 (261)
122 2hcf_A Hydrolase, haloacid deh 95.2 0.038 1.3E-06 45.6 6.6 79 61-142 92-181 (234)
123 2w43_A Hypothetical 2-haloalka 95.2 0.012 4.2E-07 47.9 3.4 76 61-142 73-154 (201)
124 3smv_A S-(-)-azetidine-2-carbo 95.1 0.018 6E-07 47.6 4.1 76 61-141 98-182 (240)
125 3u26_A PF00702 domain protein; 95.0 0.014 4.8E-07 48.3 3.4 78 61-141 99-182 (234)
126 3cnh_A Hydrolase family protei 95.0 0.016 5.4E-07 47.0 3.4 80 62-144 86-171 (200)
127 3n07_A 3-deoxy-D-manno-octulos 94.9 0.008 2.7E-07 50.1 1.4 65 71-142 61-127 (195)
128 2b82_A APHA, class B acid phos 94.8 0.0063 2.2E-07 51.2 0.7 36 63-98 89-125 (211)
129 3umc_A Haloacid dehalogenase; 94.6 0.021 7.2E-07 47.9 3.5 77 61-142 119-201 (254)
130 4eek_A Beta-phosphoglucomutase 94.5 0.024 8.3E-07 48.0 3.7 80 61-142 109-196 (259)
131 1qyi_A ZR25, hypothetical prot 94.4 0.021 7.3E-07 52.7 3.3 80 61-142 214-326 (384)
132 3kc2_A Uncharacterized protein 94.3 0.066 2.3E-06 48.8 6.4 55 10-99 12-71 (352)
133 2zg6_A Putative uncharacterize 94.2 0.04 1.4E-06 45.6 4.2 76 60-142 93-175 (220)
134 3ddh_A Putative haloacid dehal 94.1 0.038 1.3E-06 45.2 3.9 78 61-141 104-184 (234)
135 2fea_A 2-hydroxy-3-keto-5-meth 94.1 0.04 1.4E-06 46.4 4.1 77 61-143 76-175 (236)
136 3umg_A Haloacid dehalogenase; 94.0 0.02 6.7E-07 47.8 2.0 77 61-142 115-197 (254)
137 3k1z_A Haloacid dehalogenase-l 93.9 0.036 1.2E-06 47.4 3.6 77 61-141 105-188 (263)
138 1te2_A Putative phosphatase; s 93.7 0.093 3.2E-06 42.6 5.6 79 61-142 93-178 (226)
139 1xpj_A Hypothetical protein; s 93.7 0.081 2.8E-06 40.6 4.8 62 13-102 3-77 (126)
140 2om6_A Probable phosphoserine 93.7 0.054 1.8E-06 44.5 4.1 76 63-141 100-185 (235)
141 3nas_A Beta-PGM, beta-phosphog 93.6 0.045 1.5E-06 45.2 3.5 75 63-142 93-174 (233)
142 2qlt_A (DL)-glycerol-3-phospha 93.6 0.12 3.9E-06 44.5 6.3 78 61-142 113-205 (275)
143 1wr8_A Phosphoglycolate phosph 93.6 0.11 3.8E-06 43.6 6.0 56 12-101 4-60 (231)
144 3a1c_A Probable copper-exporti 93.5 0.14 4.6E-06 44.7 6.6 72 61-141 162-234 (287)
145 2go7_A Hydrolase, haloacid deh 93.5 0.08 2.7E-06 42.2 4.7 78 61-142 84-168 (207)
146 4g9b_A Beta-PGM, beta-phosphog 93.4 0.039 1.3E-06 46.8 2.9 76 62-142 95-177 (243)
147 3d6j_A Putative haloacid dehal 93.4 0.11 3.6E-06 42.2 5.4 79 61-142 88-173 (225)
148 1l6r_A Hypothetical protein TA 93.4 0.068 2.3E-06 45.1 4.3 57 12-102 6-63 (227)
149 2pke_A Haloacid delahogenase-l 93.3 0.062 2.1E-06 45.2 3.9 78 61-141 111-189 (251)
150 3qxg_A Inorganic pyrophosphata 93.2 0.067 2.3E-06 44.7 4.0 80 61-142 108-194 (243)
151 2p11_A Hypothetical protein; p 92.9 0.044 1.5E-06 45.8 2.4 78 61-142 95-172 (231)
152 3l5k_A Protein GS1, haloacid d 92.8 0.047 1.6E-06 45.9 2.4 79 61-142 111-201 (250)
153 1ltq_A Polynucleotide kinase; 92.5 0.024 8.2E-07 49.7 0.1 110 11-144 159-283 (301)
154 1xvi_A MPGP, YEDP, putative ma 92.4 0.21 7.2E-06 43.2 6.1 57 11-101 9-66 (275)
155 3pgv_A Haloacid dehalogenase-l 92.4 0.16 5.4E-06 44.0 5.3 18 9-26 19-36 (285)
156 4dw8_A Haloacid dehalogenase-l 92.1 0.24 8.1E-06 42.4 6.0 56 11-100 5-61 (279)
157 3dnp_A Stress response protein 92.0 0.2 7E-06 43.1 5.5 17 11-27 6-22 (290)
158 3mpo_A Predicted hydrolase of 92.0 0.24 8.3E-06 42.4 6.0 57 11-101 5-62 (279)
159 3ewi_A N-acylneuraminate cytid 91.8 0.083 2.8E-06 42.8 2.6 99 10-142 8-110 (168)
160 3i28_A Epoxide hydrolase 2; ar 91.6 0.11 3.8E-06 48.2 3.5 78 61-143 99-189 (555)
161 1nf2_A Phosphatase; structural 91.5 0.33 1.1E-05 41.6 6.3 57 12-102 3-59 (268)
162 1nrw_A Hypothetical protein, h 91.5 0.31 1.1E-05 42.2 6.2 56 12-101 5-61 (288)
163 3dao_A Putative phosphatse; st 91.4 0.21 7.2E-06 43.2 5.0 60 8-100 18-78 (283)
164 1rkq_A Hypothetical protein YI 91.4 0.22 7.6E-06 43.1 5.1 57 11-101 5-62 (282)
165 2fi1_A Hydrolase, haloacid deh 91.3 0.24 8.2E-06 39.3 4.9 75 63-143 83-164 (190)
166 2pq0_A Hypothetical conserved 91.2 0.21 7.2E-06 42.3 4.7 15 12-26 4-18 (258)
167 2g80_A Protein UTR4; YEL038W, 91.1 0.13 4.3E-06 44.5 3.2 78 61-143 124-216 (253)
168 3fvv_A Uncharacterized protein 91.0 0.27 9.1E-06 40.6 5.1 40 62-101 92-132 (232)
169 3epr_A Hydrolase, haloacid deh 90.9 0.13 4.5E-06 43.9 3.2 16 11-26 5-20 (264)
170 2fue_A PMM 1, PMMH-22, phospho 90.7 0.34 1.2E-05 41.5 5.5 17 10-26 12-28 (262)
171 3qgm_A P-nitrophenyl phosphata 90.5 0.47 1.6E-05 40.2 6.3 15 11-25 8-22 (268)
172 1swv_A Phosphonoacetaldehyde h 90.2 0.21 7.1E-06 42.2 3.7 80 61-142 102-189 (267)
173 3kd3_A Phosphoserine phosphohy 90.1 0.39 1.3E-05 38.6 5.2 79 63-142 83-175 (219)
174 1s2o_A SPP, sucrose-phosphatas 90.0 0.29 1E-05 41.5 4.5 53 12-99 4-56 (244)
175 2fdr_A Conserved hypothetical 90.0 0.22 7.5E-06 40.6 3.6 78 61-142 86-171 (229)
176 1u02_A Trehalose-6-phosphate p 89.9 0.23 8E-06 42.0 3.8 57 13-98 3-59 (239)
177 3vay_A HAD-superfamily hydrola 89.9 0.097 3.3E-06 43.0 1.3 73 61-141 104-182 (230)
178 2amy_A PMM 2, phosphomannomuta 89.3 0.59 2E-05 39.4 5.9 16 10-25 5-20 (246)
179 2wf7_A Beta-PGM, beta-phosphog 89.1 0.25 8.7E-06 39.9 3.3 77 61-142 90-173 (221)
180 2zos_A MPGP, mannosyl-3-phosph 88.8 0.54 1.8E-05 39.9 5.3 35 67-101 22-57 (249)
181 3fzq_A Putative hydrolase; YP_ 88.7 0.27 9.1E-06 41.8 3.3 17 11-27 5-21 (274)
182 1vjr_A 4-nitrophenylphosphatas 88.7 0.71 2.4E-05 39.1 6.0 14 12-25 18-31 (271)
183 2b30_A Pvivax hypothetical pro 88.2 0.53 1.8E-05 41.3 5.0 54 12-99 28-85 (301)
184 3pdw_A Uncharacterized hydrola 88.2 0.24 8.4E-06 42.1 2.7 46 209-263 184-229 (266)
185 1zjj_A Hypothetical protein PH 88.1 0.4 1.4E-05 40.8 4.1 14 12-25 2-15 (263)
186 1l7m_A Phosphoserine phosphata 87.7 0.23 7.8E-06 39.9 2.1 41 61-101 75-116 (211)
187 3f9r_A Phosphomannomutase; try 87.3 0.72 2.5E-05 39.3 5.2 16 11-26 4-19 (246)
188 2hx1_A Predicted sugar phospha 87.3 1 3.5E-05 38.6 6.2 45 5-85 9-54 (284)
189 2ho4_A Haloacid dehalogenase-l 87.2 0.71 2.4E-05 38.5 5.0 17 11-27 7-23 (259)
190 2yj3_A Copper-transporting ATP 87.0 0.12 4E-06 44.7 0.0 73 61-141 135-208 (263)
191 3gyg_A NTD biosynthesis operon 87.0 0.93 3.2E-05 39.0 5.8 62 10-100 21-84 (289)
192 3l7y_A Putative uncharacterize 86.6 0.42 1.4E-05 41.7 3.3 17 11-27 37-53 (304)
193 1rlm_A Phosphatase; HAD family 86.1 0.44 1.5E-05 40.8 3.2 15 12-26 4-18 (271)
194 1yv9_A Hydrolase, haloacid deh 85.6 0.68 2.3E-05 39.1 4.1 16 11-26 5-20 (264)
195 1q92_A 5(3)-deoxyribonucleotid 84.9 0.31 1.1E-05 39.6 1.6 39 61-99 74-114 (197)
196 2oyc_A PLP phosphatase, pyrido 84.5 0.86 2.9E-05 39.7 4.3 44 6-85 17-61 (306)
197 3n28_A Phosphoserine phosphata 82.2 1 3.5E-05 39.8 3.9 80 61-142 177-272 (335)
198 2rbk_A Putative uncharacterize 82.0 0.44 1.5E-05 40.5 1.3 16 12-27 3-18 (261)
199 2hcf_A Hydrolase, haloacid deh 81.6 0.61 2.1E-05 38.0 2.1 17 11-27 4-20 (234)
200 3r4c_A Hydrolase, haloacid deh 81.3 1.1 3.9E-05 37.7 3.7 15 11-25 12-26 (268)
201 2p11_A Hypothetical protein; p 81.2 0.54 1.8E-05 38.9 1.6 18 10-27 10-27 (231)
202 3d6j_A Putative haloacid dehal 80.9 0.6 2E-05 37.6 1.7 16 12-27 7-22 (225)
203 3t7k_A RTT107, regulator of TY 80.7 3.1 0.00011 35.8 6.1 84 186-272 129-240 (256)
204 2fi1_A Hydrolase, haloacid deh 80.1 0.56 1.9E-05 37.0 1.2 46 209-266 138-183 (190)
205 2hsz_A Novel predicted phospha 79.9 0.69 2.3E-05 38.7 1.8 16 12-27 24-39 (243)
206 3kd3_A Phosphoserine phosphohy 79.9 0.68 2.3E-05 37.1 1.7 17 11-27 4-20 (219)
207 2ah5_A COG0546: predicted phos 79.8 0.69 2.3E-05 37.7 1.7 16 12-27 5-20 (210)
208 2go7_A Hydrolase, haloacid deh 79.3 0.7 2.4E-05 36.5 1.6 16 12-27 5-20 (207)
209 2w43_A Hypothetical 2-haloalka 79.3 0.67 2.3E-05 37.2 1.5 15 13-27 3-17 (201)
210 3e58_A Putative beta-phosphogl 78.7 0.79 2.7E-05 36.4 1.7 17 11-27 5-21 (214)
211 2hdo_A Phosphoglycolate phosph 78.5 0.8 2.7E-05 36.8 1.7 16 12-27 5-20 (209)
212 4ex6_A ALNB; modified rossman 78.5 0.82 2.8E-05 37.4 1.8 19 9-27 17-35 (237)
213 3zx4_A MPGP, mannosyl-3-phosph 78.2 0.7 2.4E-05 39.2 1.3 14 13-26 2-15 (259)
214 2pke_A Haloacid delahogenase-l 78.0 0.76 2.6E-05 38.3 1.5 16 12-27 14-29 (251)
215 2c4n_A Protein NAGD; nucleotid 77.9 0.78 2.7E-05 37.5 1.5 46 209-263 177-222 (250)
216 2fdr_A Conserved hypothetical 77.8 0.79 2.7E-05 37.2 1.5 16 12-27 5-20 (229)
217 3fvv_A Uncharacterized protein 77.6 0.83 2.8E-05 37.5 1.6 17 11-27 4-20 (232)
218 3s6j_A Hydrolase, haloacid deh 77.3 0.9 3.1E-05 36.8 1.7 17 11-27 6-22 (233)
219 3cnh_A Hydrolase family protei 77.3 0.85 2.9E-05 36.4 1.5 47 209-265 142-188 (200)
220 2wf7_A Beta-PGM, beta-phosphog 76.9 0.68 2.3E-05 37.3 0.9 16 12-27 3-18 (221)
221 2zg6_A Putative uncharacterize 76.9 1 3.5E-05 36.8 2.0 16 12-27 4-19 (220)
222 1te2_A Putative phosphatase; s 76.9 0.92 3.2E-05 36.4 1.7 17 11-27 9-25 (226)
223 2hi0_A Putative phosphoglycola 76.7 0.86 2.9E-05 37.9 1.5 16 12-27 5-20 (240)
224 3ddh_A Putative haloacid dehal 76.5 0.95 3.3E-05 36.5 1.6 16 12-27 9-24 (234)
225 3ed5_A YFNB; APC60080, bacillu 75.9 0.88 3E-05 37.0 1.3 17 11-27 7-23 (238)
226 3nas_A Beta-PGM, beta-phosphog 75.5 0.87 3E-05 37.2 1.2 16 12-27 3-18 (233)
227 2om6_A Probable phosphoserine 75.4 0.84 2.9E-05 37.0 1.0 16 12-27 5-20 (235)
228 3umc_A Haloacid dehalogenase; 74.9 1 3.5E-05 37.2 1.5 17 11-27 22-38 (254)
229 3l5k_A Protein GS1, haloacid d 74.8 1.1 3.6E-05 37.3 1.5 18 10-27 29-46 (250)
230 3vay_A HAD-superfamily hydrola 74.6 1.1 3.7E-05 36.4 1.5 16 12-27 3-18 (230)
231 1swv_A Phosphonoacetaldehyde h 74.6 1 3.5E-05 37.7 1.4 16 12-27 7-22 (267)
232 2x4d_A HLHPP, phospholysine ph 74.5 1.3 4.5E-05 36.8 2.1 15 12-26 13-27 (271)
233 3umb_A Dehalogenase-like hydro 74.5 1.2 4.1E-05 36.2 1.7 16 11-26 4-19 (233)
234 2hoq_A Putative HAD-hydrolase 74.3 0.93 3.2E-05 37.5 1.0 16 12-27 3-18 (241)
235 4eek_A Beta-phosphoglucomutase 74.0 1.3 4.4E-05 36.9 1.9 18 10-27 27-44 (259)
236 2gfh_A Haloacid dehalogenase-l 73.9 1.1 3.8E-05 38.1 1.4 19 9-27 16-34 (260)
237 1l7m_A Phosphoserine phosphata 73.5 3.8 0.00013 32.4 4.6 17 10-26 4-20 (211)
238 3smv_A S-(-)-azetidine-2-carbo 73.3 1 3.4E-05 36.6 1.0 17 11-27 6-22 (240)
239 2qlt_A (DL)-glycerol-3-phospha 73.2 1.2 4E-05 38.0 1.4 16 12-27 36-51 (275)
240 3qxg_A Inorganic pyrophosphata 73.1 1.3 4.3E-05 36.6 1.6 17 11-27 24-40 (243)
241 2nyv_A Pgpase, PGP, phosphogly 72.6 1.3 4.3E-05 36.3 1.5 16 12-27 4-19 (222)
242 3u26_A PF00702 domain protein; 72.6 1.1 3.8E-05 36.4 1.1 16 12-27 3-18 (234)
243 3qnm_A Haloacid dehalogenase-l 72.4 1.2 4.1E-05 36.2 1.2 17 11-27 5-21 (240)
244 3umg_A Haloacid dehalogenase; 72.2 1.1 3.8E-05 36.8 1.0 17 11-27 15-31 (254)
245 2fea_A 2-hydroxy-3-keto-5-meth 71.7 1.5 5.2E-05 36.3 1.8 17 10-26 5-21 (236)
246 1q92_A 5(3)-deoxyribonucleotid 71.4 1 3.5E-05 36.4 0.6 18 10-27 3-20 (197)
247 4g9b_A Beta-PGM, beta-phosphog 71.0 1.4 4.6E-05 37.0 1.3 16 12-27 6-21 (243)
248 1y8a_A Hypothetical protein AF 70.8 1.5 5.1E-05 38.8 1.6 37 62-98 103-139 (332)
249 3k1z_A Haloacid dehalogenase-l 68.2 1.9 6.4E-05 36.4 1.6 15 13-27 3-17 (263)
250 4gxt_A A conserved functionall 67.5 5.3 0.00018 36.5 4.6 40 61-100 220-260 (385)
251 4fe3_A Cytosolic 5'-nucleotida 67.5 3.2 0.00011 35.9 3.0 41 60-100 139-180 (297)
252 2g80_A Protein UTR4; YEL038W, 65.7 1.9 6.5E-05 36.9 1.1 45 209-263 188-232 (253)
253 1yns_A E-1 enzyme; hydrolase f 64.1 2 6.9E-05 36.5 1.0 16 11-26 10-25 (261)
254 1rku_A Homoserine kinase; phos 63.8 2.9 9.9E-05 33.4 1.9 13 12-24 3-15 (206)
255 3a1c_A Probable copper-exporti 59.2 3.6 0.00012 35.4 1.7 16 12-27 33-48 (287)
256 2jc9_A Cytosolic purine 5'-nuc 57.8 7 0.00024 37.5 3.6 42 57-98 241-282 (555)
257 3ipz_A Monothiol glutaredoxin- 53.2 11 0.00039 27.4 3.4 40 64-103 4-48 (109)
258 2k2w_A Recombination and DNA r 44.1 23 0.0008 26.7 3.8 33 189-226 10-42 (118)
259 4as2_A Phosphorylcholine phosp 38.5 12 0.00042 33.2 1.8 37 62-98 143-180 (327)
260 2wem_A Glutaredoxin-related pr 38.0 16 0.00056 27.2 2.2 37 66-102 8-49 (118)
261 3i28_A Epoxide hydrolase 2; ar 37.6 11 0.00038 34.3 1.4 14 12-25 4-17 (555)
262 4g63_A Cytosolic IMP-GMP speci 34.3 42 0.0014 31.5 4.8 42 57-98 181-223 (470)
263 3gx8_A Monothiol glutaredoxin- 32.6 30 0.001 25.7 2.9 38 65-102 3-45 (121)
264 3zyw_A Glutaredoxin-3; metal b 31.7 46 0.0016 24.2 3.8 39 65-103 3-46 (111)
265 3rhb_A ATGRXC5, glutaredoxin-C 31.5 32 0.0011 24.6 2.9 38 65-102 6-43 (113)
266 4evu_A Putative periplasmic pr 31.1 58 0.002 22.3 3.9 35 190-226 17-51 (72)
267 1y9j_A SEC1 family domain cont 27.7 31 0.0011 27.3 2.3 44 171-219 96-139 (159)
268 2eel_A Cell death activator CI 24.4 40 0.0014 24.2 2.1 18 9-26 45-62 (91)
269 3c1r_A Glutaredoxin-1; oxidize 23.8 65 0.0022 23.4 3.4 40 63-102 10-50 (118)
270 3h8q_A Thioredoxin reductase 3 23.2 58 0.002 23.5 3.0 38 66-103 5-42 (114)
271 4as2_A Phosphorylcholine phosp 22.9 55 0.0019 28.9 3.3 16 10-25 24-39 (327)
272 3ctg_A Glutaredoxin-2; reduced 22.4 69 0.0024 23.8 3.4 40 63-102 22-62 (129)
273 1f2r_I Inhibitor of caspase-ac 21.7 99 0.0034 22.5 3.8 17 10-26 57-73 (100)
274 4gxt_A A conserved functionall 20.8 35 0.0012 30.9 1.6 17 8-24 37-53 (385)
No 1
>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.3e-66 Score=487.40 Aligned_cols=275 Identities=22% Similarity=0.362 Sum_probs=241.1
Q ss_pred cccchhcCCCeeEEEeCCCceeeeeccCccchhhHHhhhh-hcCCCCCCcceeec------ceeEEEEecccHHHHHHHH
Q 041003 2 NSEMVYRQKKLHLVLDLDQTLPHAVDIDILASKDRKYLMK-QRGSSSDGDLFKMA------SELFLVKVRSYIRKFLKKA 74 (282)
Q Consensus 2 ~~~~l~~~~kl~LVLDLD~TLihs~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~------~~~~~v~~RP~l~~FL~~~ 74 (282)
+++||+.++|++||||||||||||+..|..+ ++...+.+ +.++..|+..|.++ +..+||++|||+++||+++
T Consensus 17 ~~~rll~~~Kl~LVLDLDeTLiHs~~~~~~~-~~~~~~~~~~~~~~~dv~~F~l~~~~~~~~~~~~V~~RPgl~eFL~~l 95 (442)
T 3ef1_A 17 NVKRLRQEKRLSLIVXLDQTIIHATVDPTVG-EWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKI 95 (442)
T ss_dssp HHHHHHHTTCEEEEECCBTTTEEEECCTHHH-HHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHH
T ss_pred HHHHHHhcCCeEEEEeeccceeccccccccc-hhccCCCCcchhhhccccceeeeeccCCceeEEEEEeCCCHHHHHHHH
Confidence 4679999999999999999999999876443 22211111 22345566667763 4689999999999999999
Q ss_pred hcCceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCCCceeccccc-cccCCceEEEcCChhhhhhCccCeee
Q 041003 75 SKMYDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKEKGKKSGDLV-LRQEWGVVIVDDTEKVWKDHKEHLML 153 (282)
Q Consensus 75 ~~~yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~~~~KdL~~l-~~~~~~vvivDd~~~~~~~~~~N~i~ 153 (282)
+++|||+|||+|.+.||++|++.|||.+.+| ++|++||++|+..++|||++| ++++++||||||++.+|..|| |+|+
T Consensus 96 s~~yEivIfTas~~~YA~~Vl~~LDp~~~~f-~~Rl~sRd~cg~~~~KdL~~ll~rdl~~vvIIDd~p~~~~~~p-N~I~ 173 (442)
T 3ef1_A 96 SELYELHIYTMGTKAYAKEVAKIIDPTGKLF-QDRVLSRDDSGSLAQKSLRRLFPCDTSMVVVIDDRGDVWDWNP-NLIK 173 (442)
T ss_dssp TTTEEEEEECSSCHHHHHHHHHHHCTTSTTT-TTCEECTTTSSCSSCCCGGGTCSSCCTTEEEEESCSGGGTTCT-TEEE
T ss_pred hCCcEEEEEcCCCHHHHHHHHHHhccCCccc-cceEEEecCCCCceeeehHHhcCCCcceEEEEECCHHHhCCCC-CEEE
Confidence 9999999999999999999999999999999 999999999987889999977 789999999999999999886 9999
Q ss_pred H-------------H------H----------------------------------------------------------
Q 041003 154 L-------------N------G---------------------------------------------------------- 156 (282)
Q Consensus 154 i-------------D------~---------------------------------------------------------- 156 (282)
| | .
T Consensus 174 I~~~~fF~~~gD~n~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (442)
T 3ef1_A 174 VVPYEFFVGIGDINSNFLAKSTPLPEQEQLIPLEIPKDEPDSVDEINEENEETPEYDSSNSSYAQDSSTIPEKTLLKDTF 253 (442)
T ss_dssp CCCCCCSTTCCCSCC-----------------------------------------------------------------
T ss_pred cCCccccCCCCcccccccccccccccccccccccccccccccccccccccccCcccccccccccccccccchhhhhcccc
Confidence 9 1 1
Q ss_pred -----------------------------------------------------HHHHHHHHHhHhhcccccCCC------
Q 041003 157 -----------------------------------------------------ALVNVLRVMKTVHGLFFENPV------ 177 (282)
Q Consensus 157 -----------------------------------------------------~L~~l~~~L~~i~~~ff~~~~------ 177 (282)
+|..+...|.+||+.||..+.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~q~~~rpl~~~q~~l~~~~~~~~~~~~~l~d~D~~L~~l~~~L~~iH~~fy~~~d~~~~~~ 333 (442)
T 3ef1_A 254 LQNREALEEQNKERVTALELQKSERPLAKQQNALLEDEGKPTPSHTLLHNRDHELERLEKVLKDIHAVYYEEENDISSRS 333 (442)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHTSCCSCHHHHCSCCCCCCHHHHHHHHHHHHHHHHHHHHHTCCSCC
T ss_pred CccchhhHHHHHHhhhhhhhhhccCchhhHHHHhhhhhhccccccccccCCcHHHHHHHHHHHHHHHHHHHHhhhccccc
Confidence 134478899999999998762
Q ss_pred ----CCcccccccchhheeecceeEEeeccCCCCc-cchhHHHHHHHHhCCeEecccCCCccEEEEcCCCCCcHHHHHHH
Q 041003 178 ----CGDVRCFLGKIQRQILVRCTLFFSRDVDDKE-FEFPLLKWRAGELGAACTDVYNLSVAQVVSVSSRLGIKGHRLAE 252 (282)
Q Consensus 178 ----~~dvr~iL~~~r~~vl~G~~i~fsg~~~~~~-~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~~~t~K~~~A~ 252 (282)
.+||+.|+.++|.++|.||+|||||++|.+. +++..++++++.+||+|+.+++++||||||+ +.+|.|+.+|.
T Consensus 334 ~~~~~~Dv~~il~~~k~~~L~G~~IvfSG~~p~~~~~~r~~l~~~~~~lGa~~~~~vs~~vTHLVa~--~~~t~K~~~A~ 411 (442)
T 3ef1_A 334 GNHKHANVGLIIPKMKQKVLKGCRLLFSGVIPLGVDVLSSDIAKWAMSFGAEVVLDFSVPPTHLIAA--KIRTEKVKKAV 411 (442)
T ss_dssp SSSCCCCHHHHHHHHHHTTSTTCEEEEESSSCTTSCSTTSHHHHHHHTTTCEECSSSSSCCSEEEEC--SCCCHHHHHHH
T ss_pred ccCCCCcHHHHHHHHhhcccCCcEEEEecccCCCCCccHHHHHHHHHHcCCEEeCCCCCCceEEEeC--CCCCHHHHHHH
Confidence 3799999999999999999999999998864 5678999999999999999999999999999 78999999999
Q ss_pred HC-CCceecHHHHHHHHHhCCcCCCCCCCC
Q 041003 253 QH-NKFLVHPQWIYAAYYLWSRQVEKDYFP 281 (282)
Q Consensus 253 ~~-gi~IV~~~WL~~c~~~~~r~~E~~y~~ 281 (282)
++ ||+||+++||++|+..|+++||++|..
T Consensus 412 ~~g~IkIVs~~WL~dcl~~~krldE~~YlL 441 (442)
T 3ef1_A 412 SMGNIKVVKLNWLTESLSQWKRLPESDYLL 441 (442)
T ss_dssp HHSSSEEEEHHHHHHHHHHTSCCCGGGTBC
T ss_pred hcCCCEEEeHHHHHHHHHcCCcCChhcccc
Confidence 98 599999999999999999999999975
No 2
>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.7e-65 Score=476.80 Aligned_cols=275 Identities=23% Similarity=0.369 Sum_probs=241.4
Q ss_pred cccchhcCCCeeEEEeCCCceeeeeccCccchhhHHhhhh-hcCCCCCCcceeec------ceeEEEEecccHHHHHHHH
Q 041003 2 NSEMVYRQKKLHLVLDLDQTLPHAVDIDILASKDRKYLMK-QRGSSSDGDLFKMA------SELFLVKVRSYIRKFLKKA 74 (282)
Q Consensus 2 ~~~~l~~~~kl~LVLDLD~TLihs~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~------~~~~~v~~RP~l~~FL~~~ 74 (282)
+++||+.++|++||||||||||||+..|..+ ++.....+ +.+...|+..|.+. +..+||++|||+++||+.+
T Consensus 9 ~~~rl~~~~k~~LVlDLD~TLvhS~~~~~~~-~w~~~~~~~~~~~~~dv~~f~~~~~~~~~~~~~~v~~RPg~~eFL~~l 87 (372)
T 3ef0_A 9 NVKRLRQEKRLSLIVDLDQTIIHATVDPTVG-EWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKI 87 (372)
T ss_dssp HHHHHHHHTCEEEEECCBTTTEEEECCTHHH-HHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHH
T ss_pred HHHHHHhCCCCEEEEcCCCCcccccCcCccc-hhhccCCCCchhhhhhhhceeeeeccCCceEEEEEEECcCHHHHHHHH
Confidence 5789999999999999999999998776432 22211110 11223445456553 4689999999999999999
Q ss_pred hcCceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCCCceeccccc-cccCCceEEEcCChhhhhhCccCeee
Q 041003 75 SKMYDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKEKGKKSGDLV-LRQEWGVVIVDDTEKVWKDHKEHLML 153 (282)
Q Consensus 75 ~~~yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~~~~KdL~~l-~~~~~~vvivDd~~~~~~~~~~N~i~ 153 (282)
+++|||+|||++.+.||++|++.|||.+.+| ++|+++|++|+..++|||++| +++++++|||||++.+|..|| |+|+
T Consensus 88 ~~~yeivI~Tas~~~yA~~vl~~LDp~~~~f-~~ri~sr~~~g~~~~KdL~~L~~~dl~~viiiDd~~~~~~~~p-N~I~ 165 (372)
T 3ef0_A 88 SELYELHIYTMGTKAYAKEVAKIIDPTGKLF-QDRVLSRDDSGSLAQKSLRRLFPCDTSMVVVIDDRGDVWDWNP-NLIK 165 (372)
T ss_dssp HTTEEEEEECSSCHHHHHHHHHHHCTTSCSS-SSCEECTTTSSCSSCCCGGGTCSSCCTTEEEEESCSGGGTTCT-TEEE
T ss_pred hcCcEEEEEeCCcHHHHHHHHHHhccCCcee-eeEEEEecCCCCcceecHHHhcCCCCceEEEEeCCHHHcCCCC-cEee
Confidence 9999999999999999999999999999999 889999999988889999987 789999999999999999886 9999
Q ss_pred H--------------------------------------------------------------------HHHHHHHHHHH
Q 041003 154 L--------------------------------------------------------------------NGALVNVLRVM 165 (282)
Q Consensus 154 i--------------------------------------------------------------------D~~L~~l~~~L 165 (282)
| |++|..+..+|
T Consensus 166 i~~~~~f~~~~d~n~~~lp~~~~~~~~~~~~~~~~~~~q~~~~p~~~~q~~l~~~e~~~~~~~~~~~d~D~~L~~~~~~L 245 (372)
T 3ef0_A 166 VVPYEFFVGIGDINSNFLSGNREALEEQNKERVTALELQKSERPLAKQQNALLEDEGKPTPSHTLLHNRDHELERLEKVL 245 (372)
T ss_dssp CCCCCCSTTCCCTTC--------CCGGGGHHHHHHHHHHHHHCHHHHHHHHHHHSCCSCSGGGCSCCCCCCHHHHHHHHH
T ss_pred eCCccccCCcCccccccccccchhHHHhhhhhhhhhhhhhcccchhHHHHhhhccccccchhhccccCChHHHHHHHHHH
Confidence 9 12578899999
Q ss_pred hHhhcccccCC----------CCCcccccccchhheeecceeEEeeccCCCCc-cchhHHHHHHHHhCCeEecccCCCcc
Q 041003 166 KTVHGLFFENP----------VCGDVRCFLGKIQRQILVRCTLFFSRDVDDKE-FEFPLLKWRAGELGAACTDVYNLSVA 234 (282)
Q Consensus 166 ~~i~~~ff~~~----------~~~dvr~iL~~~r~~vl~G~~i~fsg~~~~~~-~~~~~l~~~~~~~Ga~v~~~~~~~vT 234 (282)
++||+.||+++ ..+||+.++.++|+++|+||+|+|||.+|... +++..++++++.+||+|+.+++++||
T Consensus 246 ~~iH~~Ff~~~~~~~~~~~~~~~~dv~~ii~~lk~~~L~G~~ivfSG~~~~~~~~~~~~l~~l~~~lGa~v~~~vs~~vT 325 (372)
T 3ef0_A 246 KDIHAVYYEEENDISSRSGNHKHANVGLIIPKMKQKVLKGCRLLFSGVIPLGVDVLSSDIAKWAMSFGAEVVLDFSVPPT 325 (372)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHTTTSTTCEEEEESSSCTTSCTTTSHHHHHHHHTTCEEESSSSSCCS
T ss_pred HHHHHHHHHHHhhhcccccccccccHHHHHHHHHhhhcCCcEEEEecccCCCcchhHHHHHHHHHHcCCEEeCcCCCCce
Confidence 99999999874 24899999999999999999999999998754 56789999999999999999999999
Q ss_pred EEEEcCCCCCcHHHHHHHHC-CCceecHHHHHHHHHhCCcCCCCCCCC
Q 041003 235 QVVSVSSRLGIKGHRLAEQH-NKFLVHPQWIYAAYYLWSRQVEKDYFP 281 (282)
Q Consensus 235 HlV~~~~~~~t~K~~~A~~~-gi~IV~~~WL~~c~~~~~r~~E~~y~~ 281 (282)
||||+ +.+|.|+.+|.++ ||+||+++||++|++.|+++||++|..
T Consensus 326 HLVa~--~~~t~K~~~A~~~~~I~IV~~~Wl~~c~~~~~~vdE~~Y~l 371 (372)
T 3ef0_A 326 HLIAA--KIRTEKVKKAVSMGNIKVVKLNWLTESLSQWKRLPESDYLL 371 (372)
T ss_dssp EEEEC--SCCCHHHHHHHHSSSCCEEEHHHHHHHHHTTSCCCGGGGBC
T ss_pred EEEEc--CCCchHHHHHHhcCCCEEEcHHHHHHHHHhCCcCChhhcee
Confidence 99999 7899999999998 799999999999999999999999974
No 3
>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}
Probab=100.00 E-value=4.5e-39 Score=276.15 Aligned_cols=150 Identities=22% Similarity=0.254 Sum_probs=135.2
Q ss_pred cCCCeeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHhcCceEEEEcCCc
Q 041003 8 RQKKLHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKASKMYDIYLCTTRI 87 (282)
Q Consensus 8 ~~~kl~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~~~yei~i~T~~~ 87 (282)
.++|++|||||||||||+++.+. .++++++|||+++||+.++++|||+|||+|.
T Consensus 31 ~~~~~tLVLDLDeTLvh~~~~~~--------------------------~~~~v~~RPgl~eFL~~l~~~yeivI~Tas~ 84 (204)
T 3qle_A 31 YQRPLTLVITLEDFLVHSEWSQK--------------------------HGWRTAKRPGADYFLGYLSQYYEIVLFSSNY 84 (204)
T ss_dssp -CCSEEEEEECBTTTEEEEEETT--------------------------TEEEEEECTTHHHHHHHHTTTEEEEEECSSC
T ss_pred cCCCeEEEEeccccEEeeecccc--------------------------CceeEEeCCCHHHHHHHHHhCCEEEEEcCCc
Confidence 47899999999999999987431 2478999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCCcccccccEEEccCCC---CCceeccccccccCCceEEEcCChhhhhhCccCeeeH-------HHH
Q 041003 88 RSYAMMMAKLLNPKCEYHISSRLITREDFK---EKGKKSGDLVLRQEWGVVIVDDTEKVWKDHKEHLMLL-------NGA 157 (282)
Q Consensus 88 ~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~---~~~~KdL~~l~~~~~~vvivDd~~~~~~~~~~N~i~i-------D~~ 157 (282)
+.||++|++.|||.+.+| ..| ++|++|. +.++|||++++++++++|||||++.+|..||+|+|+| |++
T Consensus 85 ~~ya~~vl~~LDp~~~~f-~~r-l~R~~c~~~~g~y~KdL~~Lgrdl~~vIiIDDsp~~~~~~p~N~I~I~~~~~~~D~e 162 (204)
T 3qle_A 85 MMYSDKIAEKLDPIHAFV-SYN-LFKEHCVYKDGVHIKDLSKLNRDLSKVIIIDTDPNSYKLQPENAIPMEPWNGEADDK 162 (204)
T ss_dssp HHHHHHHHHHTSTTCSSE-EEE-ECGGGSEEETTEEECCGGGSCSCGGGEEEEESCTTTTTTCGGGEEECCCCCSSCCCH
T ss_pred HHHHHHHHHHhCCCCCeE-EEE-EEecceeEECCeeeecHHHhCCChHHEEEEECCHHHHhhCccCceEeeeECCCCChh
Confidence 999999999999998888 554 7899996 3679999999999999999999999999999999999 789
Q ss_pred HHHHHHHHhHhhcccccCCCCCcccccccchhh
Q 041003 158 LVNVLRVMKTVHGLFFENPVCGDVRCFLGKIQR 190 (282)
Q Consensus 158 L~~l~~~L~~i~~~ff~~~~~~dvr~iL~~~r~ 190 (282)
|..|+|+|+.|+.. ..+|||++|++++.
T Consensus 163 L~~L~~~L~~L~~~-----~~~DVR~~L~~~~~ 190 (204)
T 3qle_A 163 LVRLIPFLEYLATQ-----QTKDVRPILNSFED 190 (204)
T ss_dssp HHHHHHHHHHHHHT-----CCSCSHHHHTTSSC
T ss_pred HHHHHHHHHHHhhc-----ChHHHHHHHHHhcC
Confidence 99999999999842 47999999998864
No 4
>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A
Probab=100.00 E-value=3.1e-35 Score=248.55 Aligned_cols=158 Identities=20% Similarity=0.230 Sum_probs=135.4
Q ss_pred hcCCCeeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecc--eeEEEEecccHHHHHHHHhcCceEEEEc
Q 041003 7 YRQKKLHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMAS--ELFLVKVRSYIRKFLKKASKMYDIYLCT 84 (282)
Q Consensus 7 ~~~~kl~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~v~~RP~l~~FL~~~~~~yei~i~T 84 (282)
..++|++||||||||||||+..+..+. + ....+.+.+ .++++++|||+++||+++++.||++|||
T Consensus 11 ~~~~k~~LVLDLD~TLvhs~~~~~~~~--d-----------~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~~~~i~I~T 77 (181)
T 2ght_A 11 QDSDKICVVINLDETLVHSSFKPVNNA--D-----------FIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVLFT 77 (181)
T ss_dssp GGTTSCEEEECCBTTTEEEESSCCSSC--S-----------EEEEEEETTEEEEEEEEECTTHHHHHHHHHHHSEEEEEC
T ss_pred ccCCCeEEEECCCCCeECCcccCCCCc--c-----------ceeeeeeCCeeEEEEEEeCCCHHHHHHHHHhCCCEEEEc
Confidence 457899999999999999987653220 0 001122233 4688999999999999999999999999
Q ss_pred CCcHHHHHHHHhhhcCCCcccccccEEEccCCC---CCceeccccccccCCceEEEcCChhhhhhCccCeeeH-------
Q 041003 85 TRIRSYAMMMAKLLNPKCEYHISSRLITREDFK---EKGKKSGDLVLRQEWGVVIVDDTEKVWKDHKEHLMLL------- 154 (282)
Q Consensus 85 ~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~---~~~~KdL~~l~~~~~~vvivDd~~~~~~~~~~N~i~i------- 154 (282)
++.+.||+++++.|||.+ +| ..+++|++|. ..+.|+|++++++++++|+|||++..|..+++|+|+|
T Consensus 78 ~~~~~~a~~vl~~ld~~~-~f--~~~~~rd~~~~~k~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i~~~~~~~ 154 (181)
T 2ght_A 78 ASLAKYADPVADLLDKWG-AF--RARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVASWFDNM 154 (181)
T ss_dssp SSCHHHHHHHHHHHCTTC-CE--EEEECGGGSEEETTEEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCCCCCSSCT
T ss_pred CCCHHHHHHHHHHHCCCC-cE--EEEEeccCceecCCcEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEeccccCCC
Confidence 999999999999999998 68 4457899995 3689999999999999999999999999999999999
Q ss_pred -HHHHHHHHHHHhHhhcccccCCCCCcccccccc
Q 041003 155 -NGALVNVLRVMKTVHGLFFENPVCGDVRCFLGK 187 (282)
Q Consensus 155 -D~~L~~l~~~L~~i~~~ff~~~~~~dvr~iL~~ 187 (282)
|++|..++|+|+.|+ ..+|||++|++
T Consensus 155 ~D~eL~~l~~~L~~l~-------~~~DVr~~l~~ 181 (181)
T 2ght_A 155 SDTELHDLLPFFEQLS-------RVDDVYSVLRQ 181 (181)
T ss_dssp TCCHHHHHHHHHHHHT-------TCSCTHHHHCC
T ss_pred ChHHHHHHHHHHHHhC-------cCccHHHHhhC
Confidence 899999999999999 67999999874
No 5
>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}
Probab=100.00 E-value=6.8e-34 Score=259.54 Aligned_cols=146 Identities=18% Similarity=0.209 Sum_probs=128.1
Q ss_pred cCCCeeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHhcCceEEEEcCCc
Q 041003 8 RQKKLHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKASKMYDIYLCTTRI 87 (282)
Q Consensus 8 ~~~kl~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~~~yei~i~T~~~ 87 (282)
.++|++|||||||||||+.+.. .++++++|||+++||+.++++|||+|||++.
T Consensus 137 ~~~k~tLVLDLDeTLvh~~~~~---------------------------~~~~~~~RP~l~eFL~~l~~~yeivIfTas~ 189 (320)
T 3shq_A 137 REGKKLLVLDIDYTLFDHRSPA---------------------------ETGTELMRPYLHEFLTSAYEDYDIVIWSATS 189 (320)
T ss_dssp CTTCEEEEECCBTTTBCSSSCC---------------------------SSHHHHBCTTHHHHHHHHHHHEEEEEECSSC
T ss_pred cCCCcEEEEeccccEEcccccC---------------------------CCcceEeCCCHHHHHHHHHhCCEEEEEcCCc
Confidence 4679999999999999997532 1235789999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCCcc-cccccEEEccCCC---------C-Cceeccccc-----cccCCceEEEcCChhhhhhCccCe
Q 041003 88 RSYAMMMAKLLNPKCEY-HISSRLITREDFK---------E-KGKKSGDLV-----LRQEWGVVIVDDTEKVWKDHKEHL 151 (282)
Q Consensus 88 ~~Ya~~v~~~ldp~~~~-f~~~rv~~r~~~~---------~-~~~KdL~~l-----~~~~~~vvivDd~~~~~~~~~~N~ 151 (282)
+.||++|++.|||.+.+ | +.| ++|++|. + .++|||+++ +++++++|||||++.+|..||+|+
T Consensus 190 ~~ya~~vld~Ld~~~~~~~-~~~-~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~~p~rdl~~tIiIDdsp~~~~~~p~Ng 267 (320)
T 3shq_A 190 MRWIEEKMRLLGVASNDNY-KVM-FYLDSTAMISVHVPERGVVDVKPLGVIWALYKQYNSSNTIMFDDIRRNFLMNPKSG 267 (320)
T ss_dssp HHHHHHHHHHTTCTTCSSC-CCC-EEECGGGCEEEEETTTEEEEECCHHHHHHHCTTCCGGGEEEEESCGGGGTTSGGGE
T ss_pred HHHHHHHHHHhCCCCCcce-eEE-EEEcCCccccccccCCCCEEEEEhHHhhcccCCCChhHEEEEeCChHHhccCcCce
Confidence 99999999999999875 5 555 5588874 2 479999999 889999999999999999999999
Q ss_pred eeH------------HHHHHHHHHHHhHhhcccccCCCCCcccccccch
Q 041003 152 MLL------------NGALVNVLRVMKTVHGLFFENPVCGDVRCFLGKI 188 (282)
Q Consensus 152 i~i------------D~~L~~l~~~L~~i~~~ff~~~~~~dvr~iL~~~ 188 (282)
|+| |++|..|++||+.|+. ..+|||+++++.
T Consensus 268 I~I~~~~~~~~~~~~D~eL~~L~~~L~~L~~------~~~DVr~~~~~~ 310 (320)
T 3shq_A 268 LKIRPFRQAHLNRGTDTELLKLSDYLRKIAH------HCPDFNSLNHRK 310 (320)
T ss_dssp EECCCCCCHHHHTTTCCHHHHHHHHHHHHHH------HCSCGGGCCGGG
T ss_pred EEeCeEcCCCCCCCccHHHHHHHHHHHHHhc------cCcchhHHHHHH
Confidence 999 6799999999999994 369999999763
No 6
>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}
Probab=99.97 E-value=7.4e-32 Score=230.37 Aligned_cols=148 Identities=21% Similarity=0.223 Sum_probs=126.5
Q ss_pred hcCCCeeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecc--eeEEEEecccHHHHHHHHhcCceEEEEc
Q 041003 7 YRQKKLHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMAS--ELFLVKVRSYIRKFLKKASKMYDIYLCT 84 (282)
Q Consensus 7 ~~~~kl~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~v~~RP~l~~FL~~~~~~yei~i~T 84 (282)
...+|++||||||||||||++.+.... + ......+.+ .++++++|||+++||+++++.|+++|||
T Consensus 24 ~~~~k~~LVLDLD~TLvhs~~~~~~~~--d-----------~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~~~~i~I~T 90 (195)
T 2hhl_A 24 LDYGKKCVVIDLDETLVHSSFKPISNA--D-----------FIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQLFECVLFT 90 (195)
T ss_dssp GGTTCCEEEECCBTTTEEEESSCCTTC--S-----------EEEEEEETTEEEEEEEEECTTHHHHHHHHHHHSEEEEEC
T ss_pred ccCCCeEEEEccccceEcccccCCCCc--c-----------ceeeeecCCceeeEEEEeCcCHHHHHHHHHcCCeEEEEc
Confidence 357899999999999999987643220 0 001112223 4688999999999999999999999999
Q ss_pred CCcHHHHHHHHhhhcCCCcccccccEEEccCCCC---CceeccccccccCCceEEEcCChhhhhhCccCeeeH-------
Q 041003 85 TRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE---KGKKSGDLVLRQEWGVVIVDDTEKVWKDHKEHLMLL------- 154 (282)
Q Consensus 85 ~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~---~~~KdL~~l~~~~~~vvivDd~~~~~~~~~~N~i~i------- 154 (282)
++.+.||+++++.|||.+ +| ..+++|++|.. .+.|+|++++++++++|+|||++..|..+++|+|+|
T Consensus 91 ss~~~~a~~vl~~ld~~~-~f--~~~l~rd~~~~~k~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~~~~~~~ 167 (195)
T 2hhl_A 91 ASLAKYADPVADLLDRWG-VF--RARLFRESCVFHRGNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQSWFDDM 167 (195)
T ss_dssp SSCHHHHHHHHHHHCCSS-CE--EEEECGGGCEEETTEEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECCCCSSCT
T ss_pred CCCHHHHHHHHHHhCCcc-cE--EEEEEcccceecCCceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEEeeecCCC
Confidence 999999999999999997 68 45588999963 689999999999999999999999999999999999
Q ss_pred -HHHHHHHHHHHhHhhc
Q 041003 155 -NGALVNVLRVMKTVHG 170 (282)
Q Consensus 155 -D~~L~~l~~~L~~i~~ 170 (282)
|++|..|+++|+.|+.
T Consensus 168 ~D~eL~~L~~~L~~l~~ 184 (195)
T 2hhl_A 168 TDTELLDLIPFFEGLSR 184 (195)
T ss_dssp TCCHHHHHHHHHHHHHC
T ss_pred ChHHHHHHHHHHHHHHh
Confidence 9999999999999984
No 7
>3l3e_A DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, cell cycle checkpoints, acetylation, cytoplasm, cytoskeleton, DNA damage; HET: DNA; 1.26A {Homo sapiens} PDB: 3pd7_A* 3jve_A*
Probab=99.85 E-value=2.9e-21 Score=149.20 Aligned_cols=91 Identities=13% Similarity=0.134 Sum_probs=80.8
Q ss_pred hhheeecceeEEeeccCCCCccchhHHHHHHHHhCCeEecccCCCccEEEEcCC-CCCcHHHHHHHHCCCceecHHHHHH
Q 041003 188 IQRQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVYNLSVAQVVSVSS-RLGIKGHRLAEQHNKFLVHPQWIYA 266 (282)
Q Consensus 188 ~r~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~-~~~t~K~~~A~~~gi~IV~~~WL~~ 266 (282)
...++|.||+|+|+|..+ ..+..++++++.+||++..+++++|||||+..+ ...+.|+..|.+.|++||+++||.+
T Consensus 11 ~~~~~l~g~~i~isg~~~---~~r~~l~~li~~~Gg~v~~~~s~~~THlI~~~~~~~~~~K~~~A~~~gi~IV~~~Wl~~ 87 (107)
T 3l3e_A 11 EAPKPLHKVVVCVSKKLS---KKQSELNGIAASLGADYRRSFDETVTHFIYQGRPNDTNREYKSVKERGVHIVSEHWLLD 87 (107)
T ss_dssp ---CTTTTCEEEECGGGG---GGHHHHHHHHHHTTCEEESSCCTTCCEEECCCCTTCCCHHHHHHHHTTCEEECHHHHHH
T ss_pred cccCCCCCeEEEEeCCCh---HhHHHHHHHHHHcCCEEeccccCCceEEEecCCCCCCCHHHHHHHHCCCeEecHHHHHH
Confidence 356799999999999976 258899999999999999999999999999521 3568999999999999999999999
Q ss_pred HHHhCCcCCCCCCCC
Q 041003 267 AYYLWSRQVEKDYFP 281 (282)
Q Consensus 267 c~~~~~r~~E~~y~~ 281 (282)
|+..++++||++|++
T Consensus 88 c~~~~~~l~e~~Y~~ 102 (107)
T 3l3e_A 88 CAQECKHLPESLYPH 102 (107)
T ss_dssp HHHHTSCCCGGGCCT
T ss_pred HHHhCCCCchhhCCC
Confidence 999999999999986
No 8
>3l46_A Protein ECT2; alternative splicing, guanine-nucleotide releasing factor, phosphoprotein, polymorphism, proto-oncogene, structural genomics; 1.48A {Homo sapiens}
Probab=99.82 E-value=1.5e-21 Score=151.64 Aligned_cols=96 Identities=16% Similarity=0.106 Sum_probs=81.3
Q ss_pred ccccccchhheeecceeEEeeccCCCCccchhHHHHHHHHhCCeEecccCCCccEEEEcCCCCCcHHHHHHHHCCCceec
Q 041003 181 VRCFLGKIQRQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVYNLSVAQVVSVSSRLGIKGHRLAEQHNKFLVH 260 (282)
Q Consensus 181 vr~iL~~~r~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~~~t~K~~~A~~~gi~IV~ 260 (282)
-|+-..++|..+|.||+|||+|+ +. .++..++++++.+||+++..+++++||||+. +..+.|+..|.++|++||+
T Consensus 10 ~~~~~~~~~~p~F~g~~Ic~sGf-~~--~er~~l~~~i~~~GG~~~~~l~~~cTHLV~~--~~~~~K~~~A~~~~i~IVs 84 (112)
T 3l46_A 10 GRENLYFQGVPPFQDCILSFLGF-SD--EEKTNMEEMTEMQGGKYLPLGDERCTHLVVE--ENIVKDLPFEPSKKLYVVK 84 (112)
T ss_dssp --------CCCTTTTCEECEESC-CH--HHHHHHHHHHHHTTCEECCTTCTTCSEEEEC--TTTBSSCSSCCCSSCEEEE
T ss_pred ccccccccCCCccCCeEEEEeCC-CH--HHHHHHHHHHHHcCCEECcccCCCceEEEec--CCchhhHHHHHHCCeeEec
Confidence 35667788899999999999996 43 3588999999999999999999999999999 6777888889899999999
Q ss_pred HHHHHHHHHhCCcCCCCCCCC
Q 041003 261 PQWIYAAYYLWSRQVEKDYFP 281 (282)
Q Consensus 261 ~~WL~~c~~~~~r~~E~~y~~ 281 (282)
++||++|++.+.++||+.|..
T Consensus 85 ~eWl~dsi~~g~~ldE~~Y~~ 105 (112)
T 3l46_A 85 QEWFWGSIQMDARAGETMYLY 105 (112)
T ss_dssp HHHHHHHHHHTSCCCGGGSBC
T ss_pred HHHHHHHHHcCCccChhhcee
Confidence 999999999999999999975
No 9
>2cou_A ECT2 protein; BRCT domain, RHO GTPase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.82 E-value=2.3e-21 Score=150.29 Aligned_cols=92 Identities=15% Similarity=0.172 Sum_probs=83.3
Q ss_pred ccchhheeecceeEEeeccCCCCccchhHHHHHHHHhCCeEecccCCCccEEEEcCCCCCcHHHHHHHHCCCceecHHHH
Q 041003 185 LGKIQRQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVYNLSVAQVVSVSSRLGIKGHRLAEQHNKFLVHPQWI 264 (282)
Q Consensus 185 L~~~r~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~~~t~K~~~A~~~gi~IV~~~WL 264 (282)
..+++..+|.||+|+|+|+.+ .++..++++++.+||+++..+++++||||+. +..+.|+..|.++|++||+++||
T Consensus 5 ~~~~~~~~F~g~~i~~sg~~~---~~r~~l~~~i~~~GG~~~~~~~~~~THLV~~--~~~~~K~~~a~~~~i~IV~~~Wl 79 (109)
T 2cou_A 5 SSGFKVPPFQDCILSFLGFSD---EEKHSMEEMTEMQGGSYLPVGDERCTHLIVE--ENTVKDLPFEPSKKLFVVKQEWF 79 (109)
T ss_dssp CCSSCCCTTTTCBEEEESSCH---HHHHHHHHHHHHHTCBCCCTTCTTCSEEEEC--TTTCSSCSSCCCTTSEEECHHHH
T ss_pred cccccCCcCCCeEEEecCCCH---HHHHHHHHHHHHcCCEEecccCCCccEEEEe--CCccHHHHHHHHCCCeEecHHHH
Confidence 345678899999999999633 3588999999999999999999999999999 67788899999999999999999
Q ss_pred HHHHHhCCcCCCCCCCC
Q 041003 265 YAAYYLWSRQVEKDYFP 281 (282)
Q Consensus 265 ~~c~~~~~r~~E~~y~~ 281 (282)
++|++.++++||++|.+
T Consensus 80 ~dsi~~g~~ldE~~Y~~ 96 (109)
T 2cou_A 80 WGSIQMDARAGETMYLY 96 (109)
T ss_dssp HHHHHTTSCCCGGGTBC
T ss_pred HHHHHcCCcCChhccCC
Confidence 99999999999999975
No 10
>3pa6_A Microcephalin; BRCT domain, cell cycle; HET: MSE; 1.50A {Homo sapiens} PDB: 3ktf_A* 2wt8_A*
Probab=99.81 E-value=4.4e-20 Score=142.36 Aligned_cols=93 Identities=13% Similarity=0.058 Sum_probs=80.7
Q ss_pred chhheeecceeEEeeccCCCCc-cchhHHHHHHHHhCCeEecccCCCccEEEEcCCCCCcHHHHHHHHCCCceecHHHHH
Q 041003 187 KIQRQILVRCTLFFSRDVDDKE-FEFPLLKWRAGELGAACTDVYNLSVAQVVSVSSRLGIKGHRLAEQHNKFLVHPQWIY 265 (282)
Q Consensus 187 ~~r~~vl~G~~i~fsg~~~~~~-~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~~~t~K~~~A~~~gi~IV~~~WL~ 265 (282)
+++..+|+||+++|.+....+. .....++.+++.+||+++.++++++||||+. +.++.|++.|+++|++||+++||+
T Consensus 2 ~~~~p~f~g~vvyvd~~~~~g~~~~s~~l~~~l~~~GA~v~~~l~~~vTHvV~~--~~~~~~~~~A~~~~i~iV~~~Wv~ 79 (107)
T 3pa6_A 2 HMAAPILKDVVAYVEVWSSNGTENYSKTFTTQLVDMGAKVSKTFNKQVTHVIFK--DGYQSTWDKAQKRGVKLVSVLWVE 79 (107)
T ss_dssp --CCCTTTTCEEEEEEBCTTSCCBCHHHHHHHHHHTTCEECSSCCTTCCEEEEE--SCCHHHHHHHHHHTCEEECHHHHH
T ss_pred CccccccCCEEEEEeccCCCChhhHHHHHHHHHHHcCCEEecccCCCccEEEEe--CCCChHHHHHhcCCCEEECHHHHH
Confidence 4567799999999987753332 2346789999999999999999999999999 667788999999999999999999
Q ss_pred HHHHhCCcCCCCCCCC
Q 041003 266 AAYYLWSRQVEKDYFP 281 (282)
Q Consensus 266 ~c~~~~~r~~E~~y~~ 281 (282)
+|+++|+++||++|++
T Consensus 80 ~C~~~~~~vdE~~Y~i 95 (107)
T 3pa6_A 80 KCRTAGAHIDESLFPA 95 (107)
T ss_dssp HHHHHTSCCCGGGSBC
T ss_pred HHHHhCccCChhcccC
Confidence 9999999999999975
No 11
>2d8m_A DNA-repair protein XRCC1; parallel beta-sheet, DNA ligase III, poly(ADP-ribose) polymerase-1, DNA polymerase beta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=1.3e-19 Score=144.47 Aligned_cols=88 Identities=15% Similarity=0.108 Sum_probs=81.6
Q ss_pred hheeecceeEEeeccCCCCccchhHHHHHHHHhCCeEecccCCCccEEEEcCCCCCcHHHHHHHHCCCceecHHHHHHHH
Q 041003 189 QRQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVYNLSVAQVVSVSSRLGIKGHRLAEQHNKFLVHPQWIYAAY 268 (282)
Q Consensus 189 r~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~~~t~K~~~A~~~gi~IV~~~WL~~c~ 268 (282)
...+|.||+|+|||..+ .++..++++++.+||+++.++++++||||+. ...+.|+..|.++|++||+++||.+|+
T Consensus 19 ~~~~f~g~~i~itG~~~---~~r~~l~~~i~~~Gg~v~~~~s~~~ThLI~~--~~~~~K~~~A~~~gi~IV~~~Wl~d~~ 93 (129)
T 2d8m_A 19 LGKILQGVVVVLSGFQN---PFRSELRDKALELGAKYRPDWTRDSTHLICA--FANTPKYSQVLGLGGRIVRKEWVLDCH 93 (129)
T ss_dssp HTTTSTTEEEEEESCCT---THHHHHHHHHHHTTEEEESSCCTTCCEEEES--SSSCHHHHHHHHHTCEEEETHHHHHHH
T ss_pred ccccCCCeEEEEeCCCc---HHHHHHHHHHHHcCCEEeCCcCCCCeEEEec--CCCChHHHHHHHCCCcEecHHHHHHHH
Confidence 35689999999999874 3588999999999999999999999999999 778999999999999999999999999
Q ss_pred HhCCcCCCCCCCC
Q 041003 269 YLWSRQVEKDYFP 281 (282)
Q Consensus 269 ~~~~r~~E~~y~~ 281 (282)
..++++||++|.+
T Consensus 94 ~~~~~l~e~~Y~l 106 (129)
T 2d8m_A 94 RMRRRLPSQRYLM 106 (129)
T ss_dssp HTTSCCCGGGGBC
T ss_pred HhCCcCChHhccc
Confidence 9999999999974
No 12
>4id3_A DNA repair protein REV1; BRCT domain, protein binding; HET: DNA; 1.97A {Saccharomyces cerevisiae S288C}
Probab=99.76 E-value=1.3e-18 Score=130.12 Aligned_cols=86 Identities=16% Similarity=0.135 Sum_probs=73.1
Q ss_pred hheeecceeEEeeccCCCCccchhHHHHHHHHhCCeEecccC--CCccEEEEcCCCCCcHHHHHHHHCCCceecHHHHHH
Q 041003 189 QRQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVYN--LSVAQVVSVSSRLGIKGHRLAEQHNKFLVHPQWIYA 266 (282)
Q Consensus 189 r~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~--~~vTHlV~~~~~~~t~K~~~A~~~gi~IV~~~WL~~ 266 (282)
..++|+||+|+|+|... +.+..++++++.+||++...++ +++||+|+. +..+.|... ..|++||+|+||.+
T Consensus 4 ~~~~f~g~~~~i~g~~~---~~~~~l~~~i~~~GG~~~~~~~~~~~~THlI~~--~~~~~K~~~--~~~~~iV~~~Wi~d 76 (92)
T 4id3_A 4 SSKIFKNCVIYINGYTK---PGRLQLHEMIVLHGGKFLHYLSSKKTVTHIVAS--NLPLKKRIE--FANYKVVSPDWIVD 76 (92)
T ss_dssp --CTTTTCEEEECSCCS---SCHHHHHHHHHHTTCEEESSCCCTTTCCEEECS--CCCHHHHHH--TTTSCEECTHHHHH
T ss_pred cccccCCEEEEEeCCCC---cCHHHHHHHHHHCCCEEEEEecCCCceEEEEec--CCCHHHHHH--cCCCCEEcccHHHH
Confidence 35789999999999532 2478899999999999999999 899999999 666666432 36899999999999
Q ss_pred HHHhCCcCCCCCCCC
Q 041003 267 AYYLWSRQVEKDYFP 281 (282)
Q Consensus 267 c~~~~~r~~E~~y~~ 281 (282)
|++.++++||++|..
T Consensus 77 ci~~~~~l~e~~Y~l 91 (92)
T 4id3_A 77 SVKEARLLPWQNYSL 91 (92)
T ss_dssp HHHHTSCCCGGGGBC
T ss_pred HHHcCCcCChhhccc
Confidence 999999999999974
No 13
>2ebw_A DNA repair protein REV1; A/B/A 3 layers, parallel beta-sheet, DNA replication, translession synthesis, TLS, DNA polymerase zeta, PCNA; HET: DNA; NMR {Homo sapiens}
Probab=99.71 E-value=1e-17 Score=126.71 Aligned_cols=86 Identities=12% Similarity=0.107 Sum_probs=75.2
Q ss_pred hheeecceeEEeeccCCCCccchhHHHHHHHHhCCeEecccC-CCccEEEEcCCCCCcHHHHHHHHCCCceecHHHHHHH
Q 041003 189 QRQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVYN-LSVAQVVSVSSRLGIKGHRLAEQHNKFLVHPQWIYAA 267 (282)
Q Consensus 189 r~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~-~~vTHlV~~~~~~~t~K~~~A~~~gi~IV~~~WL~~c 267 (282)
...+|+||+|+++|... +.+..|++++..+||++...++ ..+||+|+. +..+.|++.+. +++||+|+||.+|
T Consensus 9 ~~~lF~g~~~~isg~~~---~~~~~L~~~i~~~GG~~~~~~~~~~~THlI~~--~~~~~k~~~~~--~~~iV~p~Wl~dc 81 (97)
T 2ebw_A 9 SSTIFSGVAIYVNGYTD---PSAEELRKLMMLHGGQYHVYYSRSKTTHIIAT--NLPNAKIKELK--GEKVIRPEWIVES 81 (97)
T ss_dssp CCCTTTTCEEEECSSCS---SCHHHHHHHHHHTTCEECSSCCSSSCCEEECS--CCCTTHHHHTS--SSCCBCTHHHHHH
T ss_pred CCCCCCCeEEEEeCCCc---ccHHHHHHHHHHcCCEEeeecCCCCCEEEEec--CCChHHHHHhc--CCCEeChHHHHHH
Confidence 35799999999999743 3478999999999999998887 689999999 67678887654 8999999999999
Q ss_pred HHhCCcCCCCCCCC
Q 041003 268 YYLWSRQVEKDYFP 281 (282)
Q Consensus 268 ~~~~~r~~E~~y~~ 281 (282)
+++++++||++|.+
T Consensus 82 i~~~~~l~~~~Y~l 95 (97)
T 2ebw_A 82 IKAGRLLSYIPYQL 95 (97)
T ss_dssp HHHTSCCCSGGGBS
T ss_pred HHcCCccCchHcEe
Confidence 99999999999975
No 14
>1wf6_A Similar to S.pombe -RAD4+/CUT5+product (A40727); BRCT, topoisomerase II binding protein, checkpoint; NMR {Homo sapiens} SCOP: c.15.1.5
Probab=99.70 E-value=4.1e-17 Score=130.48 Aligned_cols=97 Identities=12% Similarity=0.145 Sum_probs=79.5
Q ss_pred CcccccccchhheeecceeEEeeccCCCCccchhHHHHHHHHhCCeEecccCCCccEEEEcCCCCCcHHHHHHHH---CC
Q 041003 179 GDVRCFLGKIQRQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVYNLSVAQVVSVSSRLGIKGHRLAEQ---HN 255 (282)
Q Consensus 179 ~dvr~iL~~~r~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~~~t~K~~~A~~---~g 255 (282)
.++-..+.+.+..+|+||+|+|+|..+ ..+..++++++.+||++...+++.|||||+. +. +.+...+.+ .+
T Consensus 27 ~~~d~~~~~~~~~lF~g~~i~i~G~~~---~~~~~L~~~i~~~Gg~v~~~l~~~vTHvI~~--~~-~~~~~~~~~~~~~~ 100 (132)
T 1wf6_A 27 ENLDVSAFQAPEDLLDGCRIYLCGFSG---RKLDKLRRLINSGGGVRFNQLNEDVTHVIVG--DY-DDELKQFWNKSAHR 100 (132)
T ss_dssp TTCCGGGCCCCTTTTTTCEEEEESCCS---HHHHHHHHHHHHTTCEEESSCCSSCCEEEES--SC-CSHHHHHHHHSCCC
T ss_pred hhcCcccccccccccCCEEEEEECCCh---HHHHHHHHHHHHCCCEEeCcCCCCCeEEEEC--Cc-hHHHHHHHHhhCCC
Confidence 334446667778999999999999732 3578899999999999999999999999998 43 334443332 47
Q ss_pred CceecHHHHHHHHHhCCcCCCCCCCC
Q 041003 256 KFLVHPQWIYAAYYLWSRQVEKDYFP 281 (282)
Q Consensus 256 i~IV~~~WL~~c~~~~~r~~E~~y~~ 281 (282)
++||+++||++|++.++++||++|.|
T Consensus 101 ~~iV~~~Wv~dsi~~~~ll~e~~Y~~ 126 (132)
T 1wf6_A 101 PHVVGAKWLLECFSKGYMLSEEPYIH 126 (132)
T ss_dssp CCEEEHHHHHHHHHHSSCCCSGGGBC
T ss_pred CeEechHHHHHHHHcCCcCCHhhccC
Confidence 99999999999999999999999987
No 15
>3olc_X DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, RAD9, DNA binding protein; HET: DNA; 2.40A {Homo sapiens} PDB: 2xnk_A* 2xnh_A*
Probab=99.68 E-value=3.7e-17 Score=147.86 Aligned_cols=92 Identities=12% Similarity=0.110 Sum_probs=84.5
Q ss_pred ccchhheeecceeEEeeccCCCCccchhHHHHHHHHhCCeEecccC-CCccEEEEcCCCCCcHHHHHHHHCCCceecHHH
Q 041003 185 LGKIQRQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVYN-LSVAQVVSVSSRLGIKGHRLAEQHNKFLVHPQW 263 (282)
Q Consensus 185 L~~~r~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~-~~vTHlV~~~~~~~t~K~~~A~~~gi~IV~~~W 263 (282)
....+..+|.||+|+|||..+ +++..++++++.+||+++.+++ +++||||+. +..+.|+..|+++|++||+++|
T Consensus 192 ~~~~~~~~f~g~~i~~tG~~~---~~r~~l~~li~~~GG~~~~~ls~~~~THLI~~--~~~g~K~~~A~~~gi~IV~~~W 266 (298)
T 3olc_X 192 MEDFKCPIFLGCIICVTGLCG---LDRKEVQQLTVKHGGQYMGQLKMNECTHLIVQ--EPKGQKYECAKRWNVHCVTTQW 266 (298)
T ss_dssp GGGGBCCTTTTCEEEECSCCH---HHHHHHHHHHHHTTCEECSSCCTTTCCEEECS--SSCSHHHHHHHHTTCEEECHHH
T ss_pred cccccccccCCeEEEEeCCCC---ccHHHHHHHHHHcCCEEeceecCCCceEEEEe--CCCchHHHHHHHCCCeEEeHHH
Confidence 456678899999999999754 3588999999999999999999 899999999 7788999999999999999999
Q ss_pred HHHHHHhCCcCCCCCCCC
Q 041003 264 IYAAYYLWSRQVEKDYFP 281 (282)
Q Consensus 264 L~~c~~~~~r~~E~~y~~ 281 (282)
|.+|++.++++||++|.+
T Consensus 267 l~dsi~~g~~lde~~Y~l 284 (298)
T 3olc_X 267 FFDSIEKGFCQDESIYKT 284 (298)
T ss_dssp HHHHHHHTSCCCGGGSBS
T ss_pred HHHHHHCCCCCCchhcCC
Confidence 999999999999999975
No 16
>3pc6_A DNA repair protein XRCC1; BRCT domain, protein:protein interactions, DNA L III-alpha BRCT2 domain, DNA binding protein; HET: DNA; 1.90A {Mus musculus} SCOP: c.15.1.1 PDB: 3pc8_A* 3qvg_B* 1cdz_A
Probab=99.68 E-value=1.4e-16 Score=121.81 Aligned_cols=88 Identities=16% Similarity=0.106 Sum_probs=79.4
Q ss_pred heeecceeEEeeccCCCCccchhHHHHHHHHhCCeEecccCCCccEEEEcCCCCCcHHHHHHHHC--CCceecHHHHHHH
Q 041003 190 RQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVYNLSVAQVVSVSSRLGIKGHRLAEQH--NKFLVHPQWIYAA 267 (282)
Q Consensus 190 ~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~~~t~K~~~A~~~--gi~IV~~~WL~~c 267 (282)
..+|.||+++|+|..|.. ++..+++++.++||.+...++++|||+|+. ++.+.++..|.+. ++.+|+|+||++|
T Consensus 5 pd~F~g~~f~l~~~~p~~--~r~~l~ryiia~GG~v~~~~~~~vTHvIt~--~~~d~~~~~a~~~~p~~~~V~P~WI~~C 80 (104)
T 3pc6_A 5 PDFFEGKHFFLYGEFPGD--ERRRLIRYVTAFNGELEDYMNERVQFVITA--QEWDPNFEEALMENPSLAFVRPRWIYSC 80 (104)
T ss_dssp CCTTTTCEEEEESCCSTT--HHHHHHHHHHHTTCEECSSCCTTCCEEEES--SCCCHHHHHHHTTCTTCEEECHHHHHHH
T ss_pred chhhCCeEEEEcCCCcHH--HHHHHHHHHHHcCCEEEcccCCCceEEEeC--CCCChhHHHHhhhCCCCeEEccHHHHHH
Confidence 358999999999998743 578899999999999999999999999999 7788999888763 6999999999999
Q ss_pred HHhCCcCCCCCCCC
Q 041003 268 YYLWSRQVEKDYFP 281 (282)
Q Consensus 268 ~~~~~r~~E~~y~~ 281 (282)
+..++.+|+++|..
T Consensus 81 i~~~klvp~~~y~~ 94 (104)
T 3pc6_A 81 NEKQKLLPHQLYGV 94 (104)
T ss_dssp HHHTSCCCGGGGBC
T ss_pred HhcCccCCccccee
Confidence 99999999999975
No 17
>1l0b_A BRCA1; TANDEM-BRCT, three-helix bundle, unknown function; 2.30A {Rattus norvegicus} SCOP: c.15.1.3 c.15.1.3
Probab=99.60 E-value=1.1e-15 Score=132.59 Aligned_cols=89 Identities=13% Similarity=0.065 Sum_probs=78.8
Q ss_pred heeecceeEEeeccCCCCccchhHHHHHHHHhCCeEecccCCCccEEEEcCCC----CCcHHHHHHHHCCCceecHHHHH
Q 041003 190 RQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVYNLSVAQVVSVSSR----LGIKGHRLAEQHNKFLVHPQWIY 265 (282)
Q Consensus 190 ~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~----~~t~K~~~A~~~gi~IV~~~WL~ 265 (282)
...+++++|++||+.+. ++..+.++++.+||.++.++++.+||||+.... ..|.|+..|...|++||+++||.
T Consensus 2 ~~~~~~~~i~~sg~~~~---~~~~l~~~~~~~G~~~~~~~~~~~THlI~~~~~~~~~~rt~K~~~a~~~g~~IV~~~Wl~ 78 (229)
T 1l0b_A 2 ERAERDISMVVSGLTPK---EVMIVQKFAEKYRLALTDVITEETTHVIIKTDAEFVCERTLKYFLGIAGGKWIVSYSWVI 78 (229)
T ss_dssp -CCCCCCEEEEESCCHH---HHHHHHHHHHHTTCEECSSCCSSCCEEEECBCTTSEECCCHHHHHHHHTTCEEEETHHHH
T ss_pred CCCCCCeEEEEcCCCHH---HHHHHHHHHHHcCCEEeCCcCCCCCEEEEcCCccccccccHHHHHHHHCCCcEecHHHHH
Confidence 45789999999998442 367899999999999999999999999999432 47999999999999999999999
Q ss_pred HHHHhCCcCCCCCCCC
Q 041003 266 AAYYLWSRQVEKDYFP 281 (282)
Q Consensus 266 ~c~~~~~r~~E~~y~~ 281 (282)
+|++.++.+||++|..
T Consensus 79 ~~~~~~~~~~e~~y~~ 94 (229)
T 1l0b_A 79 KSIQERKLLSVHEFEV 94 (229)
T ss_dssp HHHTTTSCCCSGGGBC
T ss_pred HHHHCCCcCChHHeEe
Confidence 9999999999999964
No 18
>2nte_A BARD-1, BRCA1-associated ring domain protein 1; BRCT, ring finger, zinc-binding protein, ubiquitin LI antitumor protein; 1.90A {Homo sapiens} PDB: 3fa2_A 2r1z_A
Probab=99.57 E-value=2.7e-15 Score=128.73 Aligned_cols=85 Identities=16% Similarity=0.036 Sum_probs=76.2
Q ss_pred cceeEEeeccCCCCccchhHHHHHHHHhCCeEecccCCCccEEEEcCCC-CCcHHHHHHHHCCCceecHHHHHHHHHhCC
Q 041003 194 VRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVYNLSVAQVVSVSSR-LGIKGHRLAEQHNKFLVHPQWIYAAYYLWS 272 (282)
Q Consensus 194 ~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~-~~t~K~~~A~~~gi~IV~~~WL~~c~~~~~ 272 (282)
.|++|++||+.+ .++..+.++++.+||.+.+++++++||||+.++. ..|.|+..|...|++||+++||.+|++.++
T Consensus 1 ~~~vi~~sg~~~---~~~~~l~~~~~~~G~~~~~~~~~~~THlV~~~~~~~rt~K~l~a~~~g~~IV~~~Wl~~c~~~~~ 77 (210)
T 2nte_A 1 GPLVLIGSGLSS---EQQKMLSELAVILKAKKYTEFDSTVTHVVVPGDAVQSTLKCMLGILNGCWILKFEWVKACLRRKV 77 (210)
T ss_dssp CCCEEEESSCCH---HHHHHHHHHHHHTTCEEESSCCTTCCEEEESSSSCCCSHHHHHHHHTTCEEEETHHHHHHHHHTS
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHHcCCEEeCCCCCCCeEEEEcCCCcchHHHHHHHHhcCCEEecHHHHHHHHHcCC
Confidence 378999999854 2477899999999999999999999999998432 679999999999999999999999999999
Q ss_pred cCCCCCCCC
Q 041003 273 RQVEKDYFP 281 (282)
Q Consensus 273 r~~E~~y~~ 281 (282)
.+||++|.+
T Consensus 78 ~~~e~~y~~ 86 (210)
T 2nte_A 78 CEQEEKYEI 86 (210)
T ss_dssp CCCGGGTBC
T ss_pred cCChhhccC
Confidence 999999975
No 19
>1t15_A Breast cancer type 1 susceptibility protein; protein-peptide complex, antitumor protein; HET: SEP; 1.85A {Homo sapiens} SCOP: c.15.1.3 c.15.1.3 PDB: 1jnx_X* 1t29_A* 1t2v_A* 1y98_A* 3coj_X* 3k0h_A* 3k0k_A* 3pxe_A* 3pxb_A 3pxc_X 1t2u_A 1n5o_X 3pxa_A 3k15_A* 3k16_A* 3pxd_A 2ing_X 1oqa_A
Probab=99.57 E-value=3.2e-15 Score=128.13 Aligned_cols=85 Identities=18% Similarity=0.074 Sum_probs=75.5
Q ss_pred cceeEEeeccCCCCccchhHHHHHHHHhCCeEecccCCCccEEEEcCCC----CCcHHHHHHHHCCCceecHHHHHHHHH
Q 041003 194 VRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVYNLSVAQVVSVSSR----LGIKGHRLAEQHNKFLVHPQWIYAAYY 269 (282)
Q Consensus 194 ~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~----~~t~K~~~A~~~gi~IV~~~WL~~c~~ 269 (282)
+|+++++||+.+ .++..+.++++.+||.++.++++++||||+.+.. ..|.|+..|...|++||+++||.+|++
T Consensus 3 ~~~~~~~sg~~~---~~~~~l~~~~~~~G~~~~~~~~~~~THli~~~~~~~~~~rt~k~~~a~~~g~~IV~~~Wl~~~~~ 79 (214)
T 1t15_A 3 KRMSMVVSGLTP---EEFMLVYKFARKHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLGIAGGKWVVSYFWVTQSIK 79 (214)
T ss_dssp -CCEEEEESCCH---HHHHHHHHHHHHHTCEECSSCCTTCCEEEECBCTTSEECCBHHHHHHHHTTCEEEETHHHHHHHH
T ss_pred CcEEEEECCCCH---HHHHHHHHHHHHhCCEEeCccCCCCcEEEEeCCcccchhhhHHHHHHHhcCCEEeCHHHHHHHHH
Confidence 589999999843 2467899999999999999999999999999532 469999999999999999999999999
Q ss_pred hCCcCCCCCCCC
Q 041003 270 LWSRQVEKDYFP 281 (282)
Q Consensus 270 ~~~r~~E~~y~~ 281 (282)
.++++||++|..
T Consensus 80 ~~~~~~e~~y~~ 91 (214)
T 1t15_A 80 ERKMLNEHDFEV 91 (214)
T ss_dssp TTSCCCGGGGBC
T ss_pred CCCcCChHHeEe
Confidence 999999999964
No 20
>3sqd_A PAX-interacting protein 1; tandem BRCT domains, cell cycle; HET: SEP; 2.15A {Homo sapiens}
Probab=99.56 E-value=3.1e-15 Score=129.50 Aligned_cols=90 Identities=11% Similarity=0.087 Sum_probs=78.8
Q ss_pred chhheeecceeEEeeccCCCCccchhHHHHHHHHhCCeEecccCCCccEEEEcCCCCCcHHHHHHHHCCCceecHHHHHH
Q 041003 187 KIQRQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVYNLSVAQVVSVSSRLGIKGHRLAEQHNKFLVHPQWIYA 266 (282)
Q Consensus 187 ~~r~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~~~t~K~~~A~~~gi~IV~~~WL~~ 266 (282)
.++..++.|++|+|||+.+. ++..+.++++.+||.++++. +++||||+.. ..+|.|+..|...|++||+++||.+
T Consensus 8 ~~~~~~~~~~~i~~SG~~~~---~~~~l~~~i~~lGg~v~~~~-~~~THLI~~~-~~rT~K~l~A~~~g~~IVs~~Wl~~ 82 (219)
T 3sqd_A 8 HMKLTPELTPFVLFTGFEPV---QVQQYIKKLYILGGEVAESA-QKCTHLIASK-VTRTVKFLTAISVVKHIVTPEWLEE 82 (219)
T ss_dssp -CCCCGGGCCEEEECSCCHH---HHHHHHHHHHHTTCEECSSG-GGCSEEECSS-CCCCHHHHHHTTTCSEEECHHHHHH
T ss_pred ccccCCCCCeEEEEeCCChH---HHHHHHHHHHHCCCEEeCCC-CCceEEEECC-CCCCHHHHHHHHcCCCEecHHHHHH
Confidence 35667899999999997443 36788999999999999886 8999999983 3578899999999999999999999
Q ss_pred HHHhCCcCCCCCCCC
Q 041003 267 AYYLWSRQVEKDYFP 281 (282)
Q Consensus 267 c~~~~~r~~E~~y~~ 281 (282)
|++.++.+||++|..
T Consensus 83 c~~~~~~l~e~~y~l 97 (219)
T 3sqd_A 83 CFRCQKFIDEQNYIL 97 (219)
T ss_dssp HHHHTSCCCSGGGBC
T ss_pred HHHcCCCCChHhccC
Confidence 999999999999964
No 21
>2etx_A Mediator of DNA damage checkpoint protein 1; tandem BRCT domains histone gamma-H2AX, cell cycle; 1.33A {Homo sapiens} PDB: 2azm_A* 3k05_A* 2ado_A
Probab=99.51 E-value=2.7e-14 Score=122.59 Aligned_cols=86 Identities=12% Similarity=-0.010 Sum_probs=70.5
Q ss_pred hhheeecceeEEeeccCCCCccchhHHHHHHHHhCCeEecccCCCccEEEEcCCCCCcHHHHHHHHCCCceecHHHHHHH
Q 041003 188 IQRQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVYNLSVAQVVSVSSRLGIKGHRLAEQHNKFLVHPQWIYAA 267 (282)
Q Consensus 188 ~r~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~~~t~K~~~A~~~gi~IV~~~WL~~c 267 (282)
.+.+.+.|++|+|||+.+ ..+.++++.+||.+..++++ +||||+.. -..|.|+..|...|++||+++||.+|
T Consensus 5 ~~~~~~~~~~v~~sG~~~------~~~~~~i~~lGg~~~~~~~~-~THlI~~~-~~rt~K~l~a~~~g~~IV~~~Wl~~~ 76 (209)
T 2etx_A 5 KLNQESTAPKVLFTGVVD------ARGERAVLALGGSLAGSAAE-ASHLVTDR-IRRTVKFLCALGRGIPILSLDWLHQS 76 (209)
T ss_dssp -------CCEEEECSSCC------HHHHHHHHHTTCEECSSTTT-CSEEECSS-CCCSHHHHHHHHHTCCEECTHHHHHH
T ss_pred cccccCCCcEEEEeCCCc------HHHHHHHHHCCCEEeCCCCC-ceEEEECC-CCCCHHHHHHHhcCCccccHHHHHHH
Confidence 356789999999999854 23588999999999999885 99999982 24699999999999999999999999
Q ss_pred HHhCCcCCCCCCCC
Q 041003 268 YYLWSRQVEKDYFP 281 (282)
Q Consensus 268 ~~~~~r~~E~~y~~ 281 (282)
++.++.+||++|..
T Consensus 77 ~~~~~~l~e~~y~~ 90 (209)
T 2etx_A 77 RKAGFFLPPDEYVV 90 (209)
T ss_dssp HHHTSCCCSGGGBC
T ss_pred HHcCCCCChhhccc
Confidence 99999999999974
No 22
>3olc_X DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, RAD9, DNA binding protein; HET: DNA; 2.40A {Homo sapiens} PDB: 2xnk_A* 2xnh_A*
Probab=99.48 E-value=4.6e-14 Score=127.55 Aligned_cols=84 Identities=14% Similarity=0.162 Sum_probs=75.8
Q ss_pred heeecceeEEeeccCCCCccchhHHHHHHHHhCCeEecccCCCccEEEEcCCCCCcHHHHHHHHCCCceecHHHHHHHHH
Q 041003 190 RQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVYNLSVAQVVSVSSRLGIKGHRLAEQHNKFLVHPQWIYAAYY 269 (282)
Q Consensus 190 ~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~~~t~K~~~A~~~gi~IV~~~WL~~c~~ 269 (282)
..+|.|++|++||+.+. ++..+.++++.+||+++.++++++||||+. +..|.|+..|.+.|++||+++||.+|+.
T Consensus 103 ~~~l~g~~~~~tG~~~~---~r~~l~~~i~~~GG~v~~~~t~~tTHLI~~--~~~t~Ky~~A~~~gi~IV~~~Wl~~c~~ 177 (298)
T 3olc_X 103 NMVMSDVTISCTSLEKE---KREEVHKYVQMMGGRVYRDLNVSVTHLIAG--EVGSKKYLVAANLKKPILLPSWIKTLWE 177 (298)
T ss_dssp CCTTTTCEEEEESCCHH---HHHHHHHHHHHTTCEECSSCCTTCCEEEES--SSCSHHHHHHHHTTCCEECHHHHHHHHH
T ss_pred ccccCCeEEEeCCCcHH---hHHHHHHHHHHCCCEEecCcCCCeeEEEEe--CCCChHHHHHHHCCCeEeeHHHHHHHHH
Confidence 45899999999998553 488999999999999999999999999999 7789999999999999999999999999
Q ss_pred hCCcCCCCC
Q 041003 270 LWSRQVEKD 278 (282)
Q Consensus 270 ~~~r~~E~~ 278 (282)
.++.+++..
T Consensus 178 ~~~~~~~~~ 186 (298)
T 3olc_X 178 KSQEKKITR 186 (298)
T ss_dssp HHHTTCCSS
T ss_pred cCCcCCccc
Confidence 988776543
No 23
>3al2_A DNA topoisomerase 2-binding protein 1; BRCT domain, protein binding, DNA binding protein; HET: DNA MSE; 2.00A {Homo sapiens} PDB: 3al3_A*
Probab=99.45 E-value=1.1e-13 Score=121.08 Aligned_cols=86 Identities=14% Similarity=0.047 Sum_probs=74.0
Q ss_pred eecceeEEeeccCCCCccchhHHHHHHHHhCCeEec--ccCCCccEEEEcCCCCCcHHHHHHHHCCCceecHHHHHHHHH
Q 041003 192 ILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTD--VYNLSVAQVVSVSSRLGIKGHRLAEQHNKFLVHPQWIYAAYY 269 (282)
Q Consensus 192 vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~--~~~~~vTHlV~~~~~~~t~K~~~A~~~gi~IV~~~WL~~c~~ 269 (282)
+-++.+++|||+.+ .++..+.+.++.+||.+.. +++++|||||+.. ...|.|+..|...|++||+++||.+|.+
T Consensus 6 ~~~~~~~~~Sg~~~---~~~~~l~~~i~~LGg~~~~~~~~~~~~THlV~~~-~~RT~K~l~aia~G~wIvs~~wl~~s~~ 81 (235)
T 3al2_A 6 LKKQYIFQLSSLNP---QERIDYCHLIEKLGGLVIEKQCFDPTCTHIVVGH-PLRNEKYLASVAAGKWVLHRSYLEACRT 81 (235)
T ss_dssp --CCCEEEEESCCH---HHHHHHHHHHHHTTCEECCSSSCCTTCCEEEESS-CCCSHHHHHHHHTTCEEECTHHHHHHHH
T ss_pred CCCCEEEEEcCCCH---HHHHHHHHHHHHcCCEEeccCCCCCCCcEEEECC-CCCCHHHHHHHHcCCcCccHHHHHHHHH
Confidence 44788999999743 2467799999999999976 5889999999993 2359999999999999999999999999
Q ss_pred hCCcCCCCCCCC
Q 041003 270 LWSRQVEKDYFP 281 (282)
Q Consensus 270 ~~~r~~E~~y~~ 281 (282)
.++.+||++|+.
T Consensus 82 ~g~~l~E~~ye~ 93 (235)
T 3al2_A 82 AGHFVQEEDYEW 93 (235)
T ss_dssp HTSCCCSGGGBT
T ss_pred cCCCCChhceee
Confidence 999999999963
No 24
>2jw5_A DNA polymerase lambda; BRCT domain, family X polymerase, nonhomologous END joining (NHEJ), DNA damage, DNA repair, DNA replication, DNA synthesis; HET: DNA; NMR {Homo sapiens}
Probab=99.45 E-value=1.3e-13 Score=105.84 Aligned_cols=90 Identities=10% Similarity=-0.035 Sum_probs=68.7
Q ss_pred chhheeecceeEEeeccCCCCc--cchhHHHHHHHHhCCeEecccCCCccEEEEcCCCCCcHHHHHH-HH-----CCCce
Q 041003 187 KIQRQILVRCTLFFSRDVDDKE--FEFPLLKWRAGELGAACTDVYNLSVAQVVSVSSRLGIKGHRLA-EQ-----HNKFL 258 (282)
Q Consensus 187 ~~r~~vl~G~~i~fsg~~~~~~--~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~~~t~K~~~A-~~-----~gi~I 258 (282)
+..+++|+||+++|- |.+. +.+.-...+|..+||+++.+++++|||||+. +..+.+..++ .+ .+++|
T Consensus 6 ~~~~~~F~g~~v~~~---p~~~~~~r~~i~~~~a~~~Ga~v~~~~~~~vTHVVvd--~~~s~~~~l~~l~~~~l~~~~~i 80 (106)
T 2jw5_A 6 EEAEEWLSSLRAHVV---RTGIGRARAELFEKQIVQHGGQLCPAQGPGVTHIVVD--EGMDYERALRLLRLPQLPPGAQL 80 (106)
T ss_dssp CCGGGCGGGSCCCBC---TTTCCSSSTTHHHHHHHHTTCCCCSTTCTTCCEEEEC--SSSCHHHHHHHTTCSSCCSSCEE
T ss_pred ccCcCEeCCeEEEEE---ecCCchHHHHHHHHHHHHcCCEEeeccCCCccEEEEc--CCCCHHHHHHHHhhcccCCCcEE
Confidence 457889999999973 3322 2344455699999999999999999999998 4344433221 11 24689
Q ss_pred ecHHHHHHHHHhCCcCCCCCCCC
Q 041003 259 VHPQWIYAAYYLWSRQVEKDYFP 281 (282)
Q Consensus 259 V~~~WL~~c~~~~~r~~E~~y~~ 281 (282)
|+++|+++|++.++.+||+.|..
T Consensus 81 V~~~Wv~dci~~~~llde~~y~~ 103 (106)
T 2jw5_A 81 VKSAWLSLCLQERRLVDVAGFSI 103 (106)
T ss_dssp EEHHHHHHHHHTCSCCCGGGTBC
T ss_pred ecCchHHHHHhcCcccCcccccc
Confidence 99999999999999999999964
No 25
>3u3z_A Microcephalin; DNA repair, cell cycle regulation, cell cycle; HET: SEP PTR; 1.50A {Homo sapiens} PDB: 3szm_A* 3t1n_A* 3sht_A 3shv_A*
Probab=99.40 E-value=3.6e-13 Score=114.83 Aligned_cols=83 Identities=12% Similarity=0.033 Sum_probs=72.1
Q ss_pred ceeEEeeccCCCCccchhHHHHHHHHhCC-eEecccCCCccEEEEcCCCCCcHHHHHHHHCCCceecHHHHHHHHHhCCc
Q 041003 195 RCTLFFSRDVDDKEFEFPLLKWRAGELGA-ACTDVYNLSVAQVVSVSSRLGIKGHRLAEQHNKFLVHPQWIYAAYYLWSR 273 (282)
Q Consensus 195 G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga-~v~~~~~~~vTHlV~~~~~~~t~K~~~A~~~gi~IV~~~WL~~c~~~~~r 273 (282)
.-++++||+-+ .++..+.+.++.+|| .++.++++.+||||+.+ ...|.|+..|...|++||+++||.+|++.+++
T Consensus 11 ~~~~~~sgl~~---~~~~~l~~~i~~lgG~~~~~~~~~~~THlv~~~-~~rT~K~l~ai~~g~~Iv~~~Wv~~~~~~g~~ 86 (199)
T 3u3z_A 11 TRTLVMTSMPS---EKQNVVIQVVDKLKGFSIAPDVCETTTHVLSGK-PLRTLNVLLGIARGCWVLSYDWVLWSLELGHW 86 (199)
T ss_dssp CCEEEEESCCH---HHHHHHHHHHHHHCSCEEESSCCTTEEEEEESS-CCCBHHHHHHHHTTCEEEETHHHHHHHHHTSC
T ss_pred CeEEEEcCCCH---HHHHHHHHHHHHcCCcEEecCCCCCCeEEEECC-CCCCHHHHHHHHCCCcEEeHHHHHHHhhCCCC
Confidence 45788898733 246778999999977 78899999999999983 25899999999999999999999999999999
Q ss_pred CCCCCCCC
Q 041003 274 QVEKDYFP 281 (282)
Q Consensus 274 ~~E~~y~~ 281 (282)
+||++|..
T Consensus 87 l~e~~y~~ 94 (199)
T 3u3z_A 87 ISEEPFEL 94 (199)
T ss_dssp CCSGGGBC
T ss_pred CChhhccc
Confidence 99999964
No 26
>3l41_A BRCT-containing protein 1; BRC1, BRCT domain, tandem BRCT repeat, phosphoserine binding domain, DNA repair, cell division, mitosis; HET: SEP; 1.45A {Schizosaccharomyces pombe} PDB: 3l40_A*
Probab=99.34 E-value=8.7e-13 Score=114.11 Aligned_cols=81 Identities=12% Similarity=0.053 Sum_probs=70.7
Q ss_pred ecceeEEeeccCCCCccchhHHHHHHHHhCCeEecccCCCccEEEEcCCCCCcHHHHHHHHCCCceecHHHHHHHHHhCC
Q 041003 193 LVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVYNLSVAQVVSVSSRLGIKGHRLAEQHNKFLVHPQWIYAAYYLWS 272 (282)
Q Consensus 193 l~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~~~t~K~~~A~~~gi~IV~~~WL~~c~~~~~ 272 (282)
-++.+|+|||+.+.. ..+.++.+||.++++++ ++||||+.. -..|.|+..|...|++||+++||.+|++.++
T Consensus 6 ~~~~~v~fSG~~~~~------~~~~i~~lGg~v~~~~~-~~THlV~~~-~~RT~K~l~Aia~g~~IVs~~Wl~~~~~~~~ 77 (220)
T 3l41_A 6 SKRVYITFTGYDKKP------SIDNLKKLDMSITSNPS-KCTHLIAPR-ILRTSKFLCSIPYGPCVVTMDWINSCLKTHE 77 (220)
T ss_dssp -CCEEEEECSCSSCC------CCGGGGGGTEEECSCTT-TCSEEECSS-CCCBHHHHHHGGGCCEEECHHHHHHHHHHTS
T ss_pred cceEEEEEeccCCCC------CcchHhhcceeeccCch-hhhhhhhhh-HhhhcceeecCCCCCeEEEhHHHHhhhhhhh
Confidence 367899999986643 27789999999999885 699999983 3479999999999999999999999999999
Q ss_pred cCCCCCCCC
Q 041003 273 RQVEKDYFP 281 (282)
Q Consensus 273 r~~E~~y~~ 281 (282)
.+||++|..
T Consensus 78 ~l~e~~y~l 86 (220)
T 3l41_A 78 IVDEEPYLL 86 (220)
T ss_dssp CCCSGGGBC
T ss_pred ccccCcccc
Confidence 999999964
No 27
>3ii6_X DNA ligase 4; XRCC4, NHEJ, DNA repair, BRCT, alternative splicing, coiled coil, DNA damage, DNA recombination, isopeptide bond, nucleus; HET: DNA; 2.40A {Homo sapiens} PDB: 2e2w_A*
Probab=99.30 E-value=5.9e-12 Score=111.73 Aligned_cols=94 Identities=11% Similarity=0.120 Sum_probs=69.1
Q ss_pred hhheeecceeEEeeccCCCCc------c-chhHHHHHHHHhCCeEecccCCCccEEEEcCCCCCcHHHHHHHH---CCCc
Q 041003 188 IQRQILVRCTLFFSRDVDDKE------F-EFPLLKWRAGELGAACTDVYNLSVAQVVSVSSRLGIKGHRLAEQ---HNKF 257 (282)
Q Consensus 188 ~r~~vl~G~~i~fsg~~~~~~------~-~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~~~t~K~~~A~~---~gi~ 257 (282)
.+..+|+||+++|.+....+. . ....+..++..+||+++..++++|||||+..............+ .+++
T Consensus 160 ~~~~lF~~~~vy~~~~~~~~~~~~~i~~~~l~~~~~~i~~~GG~v~~~l~~~vTHVVv~~~~~r~~~~~~~~~~~~~~~~ 239 (263)
T 3ii6_X 160 SPLSMFRRHTVYLDSYAVINDLSTKNEGTRLAIKALELRFHGAKVVSCLAEGVSHVIIGEDHSRVADFKAFRRTFKRKFK 239 (263)
T ss_dssp CGGGTTTTCEEEECCBSSTTCGGGBCCSSHHHHHHHHHHHTTCEEESSCCTTCCEEEECSCCTTHHHHHHHHHTCSSCCE
T ss_pred CcchhhCCeEEEEecccccCCcccccchhHHHHHHHHHHccCCEEecCCCCCceEEEECCCCccHHHHHHHHhhcCCCCE
Confidence 467899999999976432111 0 12345789999999999999999999999832222111221122 3689
Q ss_pred eecHHHHHHHHHhCCcCCCCCCCC
Q 041003 258 LVHPQWIYAAYYLWSRQVEKDYFP 281 (282)
Q Consensus 258 IV~~~WL~~c~~~~~r~~E~~y~~ 281 (282)
||+++||.+|++.++++||++|.+
T Consensus 240 iV~~~Wv~dci~~~~~l~E~~Y~i 263 (263)
T 3ii6_X 240 ILKESWVTDSIDKCELQEENQYLI 263 (263)
T ss_dssp EEETHHHHHHHHTTSCCCGGGTBC
T ss_pred EeChHHHHHHHHcCCcCCHhhCCC
Confidence 999999999999999999999963
No 28
>1kzy_C Tumor suppressor P53-binding protein 1; tandem-BRCT and linker complexed with non-BRCT protein, three-helix bundle, parallel beta sheet; 2.50A {Homo sapiens} SCOP: c.15.1.4 c.15.1.4 PDB: 1gzh_B
Probab=99.29 E-value=4.5e-12 Score=112.26 Aligned_cols=91 Identities=8% Similarity=0.080 Sum_probs=77.5
Q ss_pred heeecceeEEeeccCCCCc--------------------------cchhHHHHHHHHhCCeEecccCCC------ccEEE
Q 041003 190 RQILVRCTLFFSRDVDDKE--------------------------FEFPLLKWRAGELGAACTDVYNLS------VAQVV 237 (282)
Q Consensus 190 ~~vl~G~~i~fsg~~~~~~--------------------------~~~~~l~~~~~~~Ga~v~~~~~~~------vTHlV 237 (282)
..+|.|+.+++|+....+. ..+..+.++++.+||.++.+++.. +||||
T Consensus 13 ~~iF~g~~F~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~~I~~~GG~v~~~~~~~~~~~~~~t~LI 92 (259)
T 1kzy_C 13 KTLFLGYAFLLTMATTSDKLASRSKLPDGPTGSSEEEEEFLEIPPFNKQYTESQLRAGAGYILEDFNEAQCNTAYQCLLI 92 (259)
T ss_dssp TTTTTTEEEEECCCC---------------------------CCCCCHHHHHHHHHTTTCEECSSCCTTTTTTTCEEEEE
T ss_pred CcCcCCcEEEEEcccccccccccccccccccccccccccccccCcccHHHHHHHHHHCCCEEecCccccccccCCCeEEE
Confidence 5699999999999865310 145789999999999999998865 79999
Q ss_pred EcCCCCCcHHHHHHHHCCCceecHHHHHHHHHhCCcCCCCCCCC
Q 041003 238 SVSSRLGIKGHRLAEQHNKFLVHPQWIYAAYYLWSRQVEKDYFP 281 (282)
Q Consensus 238 ~~~~~~~t~K~~~A~~~gi~IV~~~WL~~c~~~~~r~~E~~y~~ 281 (282)
+.+ ...|.|+.+|.+.|++||+++||.+|++.++.+|+++|..
T Consensus 93 a~~-~~rt~K~l~ala~g~~iVs~~Wl~dc~~~~~~l~~~~Y~l 135 (259)
T 1kzy_C 93 ADQ-HCRTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYRNYLL 135 (259)
T ss_dssp ESS-CCCSHHHHHHHHHTCCEEETHHHHHHHHHTSCCCGGGSBC
T ss_pred cCC-CCCcHHHHHHHhcCCCCccHHHHHHHHHcCCcCCHHHccC
Confidence 983 3679999999999999999999999999999999999863
No 29
>1l7b_A DNA ligase; BRCT, autostructure, structural genomics, NESG, PSI, protein structure initiative, northeast structural genomics consortium; HET: DNA; NMR {Thermus thermophilus} SCOP: c.15.1.2
Probab=99.29 E-value=5.4e-12 Score=94.28 Aligned_cols=76 Identities=14% Similarity=0.011 Sum_probs=69.1
Q ss_pred heeecceeEEeeccCCCCccchhHHHHHHHHhCCeEecccCCCccEEEEcCCCCCcHHHHHHHHCCCceecHHHHHHHHH
Q 041003 190 RQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVYNLSVAQVVSVSSRLGIKGHRLAEQHNKFLVHPQWIYAAYY 269 (282)
Q Consensus 190 ~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~~~t~K~~~A~~~gi~IV~~~WL~~c~~ 269 (282)
..+|.|.++||||.++. .+..+..+++.+||+++.+++.++||||++ ...+.|+..|.++||+||+.+|+.+++.
T Consensus 5 ~~~l~G~~~v~TG~l~~---~R~e~~~~i~~~Gg~v~~sVskkt~~LV~g--~~~gsK~~kA~~lgI~Ii~E~~f~~~l~ 79 (92)
T 1l7b_A 5 GEALKGLTFVITGELSR---PREEVKALLRRLGAKVTDSVSRKTSYLVVG--ENPGSKLEKARALGVPTLTEEELYRLLE 79 (92)
T ss_dssp CCSSTTCEEECSTTTTS---CHHHHHHHHHHTTCEEESCCSSSCCCBEEC--SSSSTTHHHHHCSSSCCEEHHHHHHHHH
T ss_pred CCCcCCcEEEEecCCCC---CHHHHHHHHHHcCCEEeCcccCCeeEEEeC--CCCChHHHHHHHcCCcEEeHHHHHHHHH
Confidence 45799999999999876 389999999999999999999999999999 5556999999999999999999999886
Q ss_pred h
Q 041003 270 L 270 (282)
Q Consensus 270 ~ 270 (282)
.
T Consensus 80 ~ 80 (92)
T 1l7b_A 80 A 80 (92)
T ss_dssp H
T ss_pred h
Confidence 4
No 30
>2vxb_A DNA repair protein RHP9; BRCT, nucleus, cell cycle, DNA damage, DNA replication inhibitor, phosphoprotein, checkpoint signalling; HET: DNA; 2.3A {Schizosaccharomyces pombe} PDB: 2vxc_A*
Probab=99.28 E-value=7.8e-12 Score=109.58 Aligned_cols=87 Identities=23% Similarity=0.181 Sum_probs=73.7
Q ss_pred eeecceeEEeecc--CCCCccchhHHHHHHHHhCCeEecc-----c--CC-------------------CccEEEEcCCC
Q 041003 191 QILVRCTLFFSRD--VDDKEFEFPLLKWRAGELGAACTDV-----Y--NL-------------------SVAQVVSVSSR 242 (282)
Q Consensus 191 ~vl~G~~i~fsg~--~~~~~~~~~~l~~~~~~~Ga~v~~~-----~--~~-------------------~vTHlV~~~~~ 242 (282)
.+|.||.++++|. .+. ..+..+.++++.+||++..+ + .. ..||||+.+ .
T Consensus 1 ~lF~g~~F~ls~~~~~~~--~~k~~L~~~I~~~GG~v~~~g~~~lf~~~~~~~~~~~~~~k~~~~~~~~~~t~lia~~-~ 77 (241)
T 2vxb_A 1 LIFDDCVFAFSGPVHEDA--YDRSALETVVQDHGGLVLDTGLRPLFNDPFKSKQKKLRHLKPQKRSKSWNQAFVVSDT-F 77 (241)
T ss_dssp CTTTTEEEEECCCSSTTS--SCHHHHHHHHHHTTCEECTTCSGGGBCCSCC----CCCSCCBCGGGGGCSEEEEECSS-C
T ss_pred CCCCCcEEEEecCCCCch--hhHHHHHHHHHHCCCEEecCcchhhccCccccccccccccccccccccccceEEEcCC-C
Confidence 4799999999998 332 35788999999999999886 2 21 249999984 3
Q ss_pred CCcHHHHHHHHCCCceecHHHHHHHHHhCCcCCCCCCC
Q 041003 243 LGIKGHRLAEQHNKFLVHPQWIYAAYYLWSRQVEKDYF 280 (282)
Q Consensus 243 ~~t~K~~~A~~~gi~IV~~~WL~~c~~~~~r~~E~~y~ 280 (282)
..|.|+.+|.+.|++||+++||.+|+..++.+|+++|.
T Consensus 78 ~rt~K~~~ala~gipiV~~~Wi~dc~~~~~~~~~~~yl 115 (241)
T 2vxb_A 78 SRKVKYLEALAFNIPCVHPQFIKQCLKMNRVVDFSPYL 115 (241)
T ss_dssp CCCHHHHHHHHHTCCEECTHHHHHHHHHTSCCCSGGGB
T ss_pred CCcHHHHHHHHcCCCEecHHHHHHHHHcCCcCChhhcc
Confidence 46999999999999999999999999999999999875
No 31
>2ep8_A Pescadillo homolog 1; A/B/A 3 layers, nucleolus, ribosome biogenesis, DNA damage, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.27 E-value=5.1e-12 Score=95.86 Aligned_cols=81 Identities=16% Similarity=0.314 Sum_probs=65.9
Q ss_pred hheeecceeEEeeccCCCCccchhHHHHHHHHhCCeEecc-----------cCCCccEEEEcCCCCCcHHHHHHHHCCCc
Q 041003 189 QRQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDV-----------YNLSVAQVVSVSSRLGIKGHRLAEQHNKF 257 (282)
Q Consensus 189 r~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~-----------~~~~vTHlV~~~~~~~t~K~~~A~~~gi~ 257 (282)
.+++|+|+++++++-.| +..+..++.++||+++.+ .+.++||+|+. ++...+ +..+..
T Consensus 9 ~~~LF~g~~F~i~~e~p-----~~~le~~I~~~GG~v~~~~~~~~g~~~~~~~~~iTh~I~d--rp~~~~----~~~~r~ 77 (100)
T 2ep8_A 9 HKKLFEGLKFFLNREVP-----REALAFIIRSFGGEVSWDKSLCIGATYDVTDSRITHQIVD--RPGQQT----SVIGRC 77 (100)
T ss_dssp SCCTTSSCEEECCSSSC-----HHHHHHHHHHTTCEEECCTTTSSCCCSCTTCTTCCEEECS--CTTTSC----CBTTBE
T ss_pred hHHHcCCcEEEEecCCC-----HHHHHHHHHHcCCEEEeccccccCcccccCCCceEEEEec--ccchhh----hcCCCe
Confidence 36789999999987544 678889999999999875 25789999998 543222 124679
Q ss_pred eecHHHHHHHHHhCCcCCCCCCC
Q 041003 258 LVHPQWIYAAYYLWSRQVEKDYF 280 (282)
Q Consensus 258 IV~~~WL~~c~~~~~r~~E~~y~ 280 (282)
+|.|+||.+|+...+.+|+++|.
T Consensus 78 ~VqPqWV~Dcin~~~lLp~~~Y~ 100 (100)
T 2ep8_A 78 YVQPQWVFDSVNARLLLPVAEYF 100 (100)
T ss_dssp EECTHHHHHHHHHTSCCCTTTCC
T ss_pred EEcchHHHHHHhcCCcCChhhcC
Confidence 99999999999999999999994
No 32
>3ii6_X DNA ligase 4; XRCC4, NHEJ, DNA repair, BRCT, alternative splicing, coiled coil, DNA damage, DNA recombination, isopeptide bond, nucleus; HET: DNA; 2.40A {Homo sapiens} PDB: 2e2w_A*
Probab=99.26 E-value=8.5e-12 Score=110.69 Aligned_cols=90 Identities=17% Similarity=0.105 Sum_probs=74.1
Q ss_pred ccchhheeecceeEEe-eccCCCCccchhHHHHHHHHhCCeEecccCCCccEEEEcCCCCCcHHHHHHHHCC-CceecHH
Q 041003 185 LGKIQRQILVRCTLFF-SRDVDDKEFEFPLLKWRAGELGAACTDVYNLSVAQVVSVSSRLGIKGHRLAEQHN-KFLVHPQ 262 (282)
Q Consensus 185 L~~~r~~vl~G~~i~f-sg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~~~t~K~~~A~~~g-i~IV~~~ 262 (282)
+.....++|+|+.+++ +|.. .+.+..|.+++..+||++..+.++.+||+|+. + .+.|+..|.+.| ++||+|+
T Consensus 3 ~~~~~s~lF~G~~f~V~sg~~---~~~k~~L~~lI~~~GG~v~~n~~~~t~~iIa~--~-~~~k~~~~~~~g~~~IV~p~ 76 (263)
T 3ii6_X 3 MGSKISNIFEDVEFCVMSGTD---SQPKPDLENRIAEFGGYIVQNPGPDTYCVIAG--S-ENIRVKNIILSNKHDVVKPA 76 (263)
T ss_dssp ---CCCCTTTTCEEEECCCC-----CCHHHHHHHHHHTTCEECSSCCTTEEEEECS--S-CCHHHHHHHHSCSCCEECHH
T ss_pred CCCcCcccCCCeEEEEEcCCC---CCCHHHHHHHHHHcCCEEEecCCCCEEEEEeC--C-CCHHHHHHHhcCCCCEeehH
Confidence 4455788999999987 5531 14588999999999999999888888888887 4 458999999987 9999999
Q ss_pred HHHHHHHhCCcCCCCCCC
Q 041003 263 WIYAAYYLWSRQVEKDYF 280 (282)
Q Consensus 263 WL~~c~~~~~r~~E~~y~ 280 (282)
||.+|+..++.+|-++|.
T Consensus 77 Wv~Dci~~~~llp~~p~~ 94 (263)
T 3ii6_X 77 WLLECFKTKSFVPWQPRF 94 (263)
T ss_dssp HHHHHHHHTSCCCCCGGG
T ss_pred HHHHHHhcCCcCCCCHHH
Confidence 999999999999988774
No 33
>2coe_A Deoxynucleotidyltransferase, terminal variant; BRCT domain, DNA polymerase, teminal deoxynucleotidyltransferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.24 E-value=4.4e-11 Score=93.32 Aligned_cols=90 Identities=13% Similarity=-0.027 Sum_probs=67.5
Q ss_pred heeecceeEEeeccCCCCccchhHHHHHHHHhCCeEecccCCCccEEEEcCCCCCcHHHHHHHH-------CCCceecHH
Q 041003 190 RQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVYNLSVAQVVSVSSRLGIKGHRLAEQ-------HNKFLVHPQ 262 (282)
Q Consensus 190 ~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~~~t~K~~~A~~-------~gi~IV~~~ 262 (282)
...|+||+|+|-..- .+...+.-+.+++..+||++.+.++++|||||+. +...+.+..-.+ .+.++|+..
T Consensus 18 ~~~F~g~~iy~v~~~-~g~~R~~~l~~l~r~~G~~V~~~ls~~VTHVVve--~~~~~e~~~~l~~~~l~~~~~~~lv~i~ 94 (120)
T 2coe_A 18 DIKFQDLVVFILEKK-MGTTRRALLMELARRKGFRVENELSDSVTHIVAE--NNSGSDVLEWLQAQKVQVSSQPELLDVS 94 (120)
T ss_dssp CCSCTTCEEEEECTT-TCHHHHHHHHHHHHHHTCEECSSCCTTCCEEEES--SCCHHHHHHHHHHCCCCCSSCCEEEEHH
T ss_pred ccccCCeEEEEeecc-cchHHHHHHHHHHHHcCCEEeeccCCCcCEEEec--CCCHHHHHHHHhccccccccccEEeecH
Confidence 468999999994331 1112345667999999999999999999999997 433322221112 257999999
Q ss_pred HHHHHHHhCCcCCCCCCCCC
Q 041003 263 WIYAAYYLWSRQVEKDYFPL 282 (282)
Q Consensus 263 WL~~c~~~~~r~~E~~y~~~ 282 (282)
|+++|++.++.+||+.|.-|
T Consensus 95 Wl~esmk~g~lv~ee~~~~l 114 (120)
T 2coe_A 95 WLIECIGAGKPVEMTGKHQL 114 (120)
T ss_dssp HHHHHHHTTSCCCCSSSSBC
T ss_pred HHHHHHHcCCccCcccceEe
Confidence 99999999999999887643
No 34
>2k6g_A Replication factor C subunit 1; protein, BRCT, DNA binding, activator, alternative splicing, ATP-binding, DNA replication, DNA- binding; NMR {Homo sapiens} PDB: 2k7f_A
Probab=99.22 E-value=5e-11 Score=91.73 Aligned_cols=80 Identities=10% Similarity=-0.032 Sum_probs=70.8
Q ss_pred hheeecceeEEeeccCCCCccchhHHHHHHHHhCCeEecccCCCccEEEEcCCCCCcHHHHHHHHCCCceecHHHHHHHH
Q 041003 189 QRQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVYNLSVAQVVSVSSRLGIKGHRLAEQHNKFLVHPQWIYAAY 268 (282)
Q Consensus 189 r~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~~~t~K~~~A~~~gi~IV~~~WL~~c~ 268 (282)
...+|.|.++||||.++.. .+..+..+++.+||+|+.+++.+++|||+++ +.++.|...|.++||+||+.+|+.+.+
T Consensus 29 ~~~~l~G~~~v~TG~l~~~--~R~e~~~~i~~~Gg~v~~sVSkkTd~LV~G~-~~g~sK~~kA~~lgI~Ii~E~~f~~ll 105 (109)
T 2k6g_A 29 AENCLEGLIFVITGVLESI--ERDEAKSLIERYGGKVTGNVSKKTNYLVMGR-DSGQSKSDKAAALGTKIIDEDGLLNLI 105 (109)
T ss_dssp CTTTTTTCEEEEESBCSSC--CHHHHHHHHHHTTCEEESSCCTTCCEEEECB-CCCHHHHHHHHHHTCEEECHHHHHHHH
T ss_pred CCCCCCCCEEEEeeeCCCC--CHHHHHHHHHHcCCEeeCcccCCceEEEECC-CCChHHHHHHHHcCCeEEeHHHHHHHH
Confidence 3468999999999998653 4889999999999999999999999999994 345599999999999999999999998
Q ss_pred HhC
Q 041003 269 YLW 271 (282)
Q Consensus 269 ~~~ 271 (282)
...
T Consensus 106 ~~~ 108 (109)
T 2k6g_A 106 RNL 108 (109)
T ss_dssp HHT
T ss_pred HhC
Confidence 754
No 35
>2ebu_A Replication factor C subunit 1; A/B/A 3 layers, parallel beta-sheet, DNA replication, clamp loader, RFC1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.19 E-value=8.1e-11 Score=90.84 Aligned_cols=78 Identities=10% Similarity=-0.021 Sum_probs=70.3
Q ss_pred heeecceeEEeeccCCCCccchhHHHHHHHHhCCeEecccCCCccEEEEcCCCCCcHHHHHHHHCCCceecHHHHHHHHH
Q 041003 190 RQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVYNLSVAQVVSVSSRLGIKGHRLAEQHNKFLVHPQWIYAAYY 269 (282)
Q Consensus 190 ~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~~~t~K~~~A~~~gi~IV~~~WL~~c~~ 269 (282)
.++|.|.+|+|||.++.. .+..+..+++.+||+|+..++.+++|||++. +.++.|...|.++||+|++.+|+.+.+.
T Consensus 20 ~~~l~G~~~v~TG~l~~~--~R~e~~~~i~~~Ggkv~~sVSkkTd~LV~G~-~~g~sKl~KA~~lgI~IisE~~f~~ll~ 96 (112)
T 2ebu_A 20 ENCLEGLIFVITGVLESI--ERDEAKSLIERYGGKVTGNVSKKTNYLVMGR-DSGQSKSDKAAALGTKIIDEDGLLNLIR 96 (112)
T ss_dssp SSSSTTCEEEECSCCSSS--CHHHHHHHHHHTTCEECSSCCSSCCEEEECS-SCCSHHHHHHHHHTCEEEEHHHHHHHHH
T ss_pred CCCcCCCEEEEeeeCCCC--CHHHHHHHHHHcCCEEeccccCCeeEEEecC-CCChHHHHHHHHcCCeEEeHHHHHHHHh
Confidence 468999999999998653 4889999999999999999999999999994 4566999999999999999999999987
Q ss_pred h
Q 041003 270 L 270 (282)
Q Consensus 270 ~ 270 (282)
.
T Consensus 97 ~ 97 (112)
T 2ebu_A 97 T 97 (112)
T ss_dssp H
T ss_pred h
Confidence 4
No 36
>1z56_C DNA ligase IV; DNA repair, BRCT, NHEJ, XRCC4, DNA ligase, coiled-coil; HET: DNA; 3.92A {Saccharomyces cerevisiae}
Probab=99.17 E-value=9.2e-12 Score=110.27 Aligned_cols=92 Identities=13% Similarity=0.146 Sum_probs=51.5
Q ss_pred hhheeecceeEEeeccCCCCccchhHHHHHHHHhCCeEecccCCCccEEEEcCCCCCcHH----HHHHHHC---------
Q 041003 188 IQRQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVYNLSVAQVVSVSSRLGIKG----HRLAEQH--------- 254 (282)
Q Consensus 188 ~r~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~~~t~K----~~~A~~~--------- 254 (282)
....+|+||+++|+|..+.. ....+..++.++||+++.+++..+||||+..+.....+ .+.....
T Consensus 156 ~~~~lF~g~~~yl~~~~~~~--~~~~l~~~i~~~GG~v~~~l~~~t~hVV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (264)
T 1z56_C 156 FPLFLFSNRIAYVPRRKIST--EDDIIEMKIKLFGGKITDQQSLCNLIIIPYTDPILRKDCMNEVHEKIKEQIKASDTIP 233 (264)
T ss_dssp CCCC----------------------CHHHHHHHTTSCCCCSSSCSEEECCCSSTTTHHHHSSHHHHTTTTTTTSSSSCC
T ss_pred CchhhhCCeEEEEecCCCch--hHHHHHHHHHHcCCEEecccCCCEEEEEeCCCccchHHHHHHHHHHHHhhcccccccC
Confidence 45679999999999864332 24556788999999999999977778877621111122 2221111
Q ss_pred C-CceecHHHHHHHHHhCCcCCCCCCCC
Q 041003 255 N-KFLVHPQWIYAAYYLWSRQVEKDYFP 281 (282)
Q Consensus 255 g-i~IV~~~WL~~c~~~~~r~~E~~y~~ 281 (282)
+ .+||+++||++|++.++++||+.|.|
T Consensus 234 ~~~~iV~~~Wv~dci~~~~ll~e~~Y~~ 261 (264)
T 1z56_C 234 KIARVVAPEWVDHSINENCQVPEEDFPV 261 (264)
T ss_dssp CCCEEECTHHHHHHHTTSCCCSSCCC--
T ss_pred CCCEEecHHHHHHHHHcCCcCCHHHcCC
Confidence 3 49999999999999999999999987
No 37
>3pc7_A DNA ligase 3; DNA repair, BRCT domain, protein:protein interactions, XRCC1 domain, DNA binding protein; HET: DNA MSE; 1.65A {Homo sapiens} SCOP: c.15.1.2 PDB: 3pc8_C* 1imo_A* 1in1_A* 3qvg_A*
Probab=99.14 E-value=5.3e-11 Score=87.74 Aligned_cols=74 Identities=18% Similarity=0.290 Sum_probs=62.2
Q ss_pred heeecceeEEeeccCCCCccchhHHHHHHHHhCCeEecccCC-CccEEEEcCCCCCcHHHHHHHHCCCceecHHHHHHHH
Q 041003 190 RQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVYNL-SVAQVVSVSSRLGIKGHRLAEQHNKFLVHPQWIYAAY 268 (282)
Q Consensus 190 ~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~~-~vTHlV~~~~~~~t~K~~~A~~~gi~IV~~~WL~~c~ 268 (282)
..+|.|+++++.+-+|. ...+.+++.++||++..+++. ++||+|+. +. ...+...|+|+||++|+
T Consensus 14 pdiFsg~~~~l~~~v~~----~~~l~RyiiAfgG~v~~~~~~~~vTHvI~~--~~--------~~~~~~~V~p~WI~dcI 79 (88)
T 3pc7_A 14 LDIFTGVRLYLPPSTPD----FSRLRRYFVAFDGDLVQEFDMTSATHVLGS--RD--------KNPAAQQVSPEWIWACI 79 (88)
T ss_dssp CCCSTTCEECCCTTSTT----HHHHHHHHHHTTCEECCGGGGGGCSEEESC--CT--------TCTTSEEECHHHHHHHH
T ss_pred ChhhcCeEEEccCCcCc----hhhheeeeeecCCEEecccCCCcCeEEecC--CC--------cCCCCcEEchHHHHHHH
Confidence 57999999999776653 367899999999999888875 99999987 32 23478999999999999
Q ss_pred HhCCcCCCC
Q 041003 269 YLWSRQVEK 277 (282)
Q Consensus 269 ~~~~r~~E~ 277 (282)
..++.++++
T Consensus 80 ~k~~Ll~~~ 88 (88)
T 3pc7_A 80 RKRRLVAPS 88 (88)
T ss_dssp HHTSCCSCC
T ss_pred hCCcccCCC
Confidence 999998864
No 38
>2cok_A Poly [ADP-ribose] polymerase-1; BRCT domain, DNA repair, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2le0_A
Probab=99.10 E-value=1.7e-10 Score=89.28 Aligned_cols=84 Identities=11% Similarity=0.005 Sum_probs=70.1
Q ss_pred heeecceeEEeeccCCCCccchhHHHHHHHHhCCeEecccCCCccEEEEcCC-CCCcHHHHHHHHCCCceecHHHHH---
Q 041003 190 RQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVYNLSVAQVVSVSS-RLGIKGHRLAEQHNKFLVHPQWIY--- 265 (282)
Q Consensus 190 ~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~-~~~t~K~~~A~~~gi~IV~~~WL~--- 265 (282)
..+|.|.+++|||.++. .+..+.++++.+||+++..++..+||||++.+ +..+.|..+|.++||+||+.+||.
T Consensus 8 ~~~l~G~~~ViTG~l~~---~R~e~k~~ie~~Ggkv~~sVskkT~~lV~g~~~e~~gsKl~kA~~lgI~IvsE~~l~~~~ 84 (113)
T 2cok_A 8 DKPLSNMKILTLGKLSR---NKDEVKAMIEKLGGKLTGTANKASLCISTKKEVEKMNKKMEEVKEANIRVVSEDFLQDVS 84 (113)
T ss_dssp CCSSSSCEEEECSCCSS---CHHHHHHHHHHTTCEEESCSTTCSEEECCHHHHHHCCHHHHHHHHTTCCEECTHHHHHHH
T ss_pred CCCcCCCEEEEEecCCC---CHHHHHHHHHHCCCEEcCccccCccEEEECCCCCCCChHHHHHHHCCCcEEeHHHHHHHH
Confidence 45799999999999865 38899999999999999999999999999932 125689999999999999999954
Q ss_pred -------HHHHhCCcCCC
Q 041003 266 -------AAYYLWSRQVE 276 (282)
Q Consensus 266 -------~c~~~~~r~~E 276 (282)
+|+...+..|-
T Consensus 85 ~~~~~~~~~i~k~~i~~w 102 (113)
T 2cok_A 85 ASTKSLQELFLAHILSSW 102 (113)
T ss_dssp SCCSCHHHHHHHTBCSSC
T ss_pred hhchhHHHHHHHhcCCCC
Confidence 56665555553
No 39
>2dun_A POL MU, DNA polymerase MU; layers A/B/A, parallel beta-sheet of 4 strands, non- homologous END jonting, somatic hypermutation, V(D)J recombination; HET: DNA; NMR {Homo sapiens} PDB: 2htf_A*
Probab=98.97 E-value=1.7e-09 Score=84.99 Aligned_cols=88 Identities=9% Similarity=0.003 Sum_probs=66.7
Q ss_pred eeecceeEEeeccCCCCccchhHHHHHHHHhCCeEecccCCCccEEEEcCCCCCcHHHH-HH----HH-----CCCceec
Q 041003 191 QILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVYNLSVAQVVSVSSRLGIKGHR-LA----EQ-----HNKFLVH 260 (282)
Q Consensus 191 ~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~~~t~K~~-~A----~~-----~gi~IV~ 260 (282)
..|.|++|++-+.-.+. ..+.-|.++|...|+.+.+.++++|||||+. +...+-+. +- .+ .+.++|+
T Consensus 9 ~~F~~v~iyive~kmG~-sRr~fL~~la~~kGf~v~~~~S~~VTHVV~E--~~s~~~~~~~L~~~~~~l~~~~~~~~lLd 85 (133)
T 2dun_A 9 TRFPGVAIYLVEPRMGR-SRRAFLTGLARSKGFRVLDACSSEATHVVME--ETSAEEAVSWQERRMAAAPPGCTPPALLD 85 (133)
T ss_dssp CSEEEEEEEECHHHHCS-HHHHHHHHHHHHHTEEECSSCCTTCCEEEES--SCCHHHHHHHHHHHHHHSCTTCCCCEEEE
T ss_pred cccCccEEEEecCCcCH-HHHHHHHHHHHhcCCEeccccCCCceEEEec--CCCHHHHHHHHHHhhcccCcCCCCcEEec
Confidence 46999999986542221 3457789999999999999999999999996 43322211 11 11 3579999
Q ss_pred HHHHHHHHHhCCcCCCCCCCC
Q 041003 261 PQWIYAAYYLWSRQVEKDYFP 281 (282)
Q Consensus 261 ~~WL~~c~~~~~r~~E~~y~~ 281 (282)
+.|+.+|++.++.+||+.|.-
T Consensus 86 isWltecm~~g~pV~~e~~~~ 106 (133)
T 2dun_A 86 ISWLTESLGAGQPVPVECRHR 106 (133)
T ss_dssp HHHHHHHHHHTSCCCCCTTTS
T ss_pred cHHHHHHHhcCCcCCcccceE
Confidence 999999999999999987753
No 40
>1l0b_A BRCA1; TANDEM-BRCT, three-helix bundle, unknown function; 2.30A {Rattus norvegicus} SCOP: c.15.1.3 c.15.1.3
Probab=98.88 E-value=2.2e-09 Score=92.70 Aligned_cols=91 Identities=12% Similarity=0.148 Sum_probs=61.6
Q ss_pred hheeecceeEEeeccCCCCccchhHHHHHHHHhCCeEecccCC-----CccEEEEcCCCC--CcHHHH-HHHHCCCceec
Q 041003 189 QRQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVYNL-----SVAQVVSVSSRL--GIKGHR-LAEQHNKFLVH 260 (282)
Q Consensus 189 r~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~~-----~vTHlV~~~~~~--~t~K~~-~A~~~gi~IV~ 260 (282)
+..+|.|+.++|+|.+.. +.+..+.++++.+||++...... .+||+|+..... ...++. .|.+.|++||+
T Consensus 114 ~~~lF~g~~~~~~~~~~~--~~~~~l~~li~~~GG~v~~~~~~~~~~~~~~~~vvv~~~~~~~~~~~~~l~~~~~i~iVs 191 (229)
T 1l0b_A 114 QEKLFEGLQIYCCEPFTN--MPKDELERMLQLCGASVVKELPLLTRDTGAHPIVLVQPSAWTEDNDCPDIGQLCKGRLVM 191 (229)
T ss_dssp C--CCTTCEEEECSCCSS--SCHHHHHHHHHHTTCEEECSSSCGGGCCSSCCEEEEC-------------------CEEE
T ss_pred hhhhhcCceEEEEecCCC--CCHHHHHHHHHHCCCEEeCCcccccccCCCceEEEEcCCccchhhhHHHHHHHcCCeEee
Confidence 468999999999875443 34788999999999999988865 368866552111 233444 34557999999
Q ss_pred HHHHHHHHHhCCcCCCCCCCC
Q 041003 261 PQWIYAAYYLWSRQVEKDYFP 281 (282)
Q Consensus 261 ~~WL~~c~~~~~r~~E~~y~~ 281 (282)
++||.+|+..++.++|++|..
T Consensus 192 ~~WlldsI~~~~~~~~~~Y~l 212 (229)
T 1l0b_A 192 WDWVLDSISVYRCRDLDAYLV 212 (229)
T ss_dssp THHHHHHHHTTSCCCGGGGBC
T ss_pred hhHHHHHHhcCCcCCccceEc
Confidence 999999999999999999964
No 41
>1z56_C DNA ligase IV; DNA repair, BRCT, NHEJ, XRCC4, DNA ligase, coiled-coil; HET: DNA; 3.92A {Saccharomyces cerevisiae}
Probab=98.86 E-value=2.6e-10 Score=100.92 Aligned_cols=89 Identities=12% Similarity=0.119 Sum_probs=68.5
Q ss_pred heeecceeEEe-eccCCC---CccchhHHHHHHHHhCCeEecccCCC-----ccEEEEcCCCCCcHHHHHHHHCCCceec
Q 041003 190 RQILVRCTLFF-SRDVDD---KEFEFPLLKWRAGELGAACTDVYNLS-----VAQVVSVSSRLGIKGHRLAEQHNKFLVH 260 (282)
Q Consensus 190 ~~vl~G~~i~f-sg~~~~---~~~~~~~l~~~~~~~Ga~v~~~~~~~-----vTHlV~~~~~~~t~K~~~A~~~gi~IV~ 260 (282)
.++|+||++++ +|.... ....+..|.+++..+||+++...... .||+|+. + .|.|+..+.+.|++||+
T Consensus 3 s~lF~g~~f~v~~~~~~p~~~~~~~~~~L~~li~~~GG~~~~~~~~~t~~~~~~~iI~~--~-~t~k~~~~~~~~~~vV~ 79 (264)
T 1z56_C 3 SNIFAGLLFYVLSDYVTEDTGIRITRAELEKTIVEHGGKLIYNVILKRHSIGDVRLISC--K-TTTECKALIDRGYDILH 79 (264)
T ss_dssp CCCCCTTCCCCSEEEECCCCCSSSSCCCTHHHHHHHHTTSCCCSSCCCCCSSCCEEEEC--S-CCGGGGGGTTTTCCCBC
T ss_pred cccCCCcEEEEEcCCCCccccccCCHHHHHHHHHHcCCEEeecCCCCccCccceEEEec--C-CcHHHHHHHhCCCCEEe
Confidence 57999999976 664321 11246789999999999887644332 4778877 3 57787777777899999
Q ss_pred HHHHHHHHHhCCcCCCCCCCC
Q 041003 261 PQWIYAAYYLWSRQVEKDYFP 281 (282)
Q Consensus 261 ~~WL~~c~~~~~r~~E~~y~~ 281 (282)
|+||.+|+..++.+|.++|..
T Consensus 80 p~Wv~dci~~~~llp~~~y~~ 100 (264)
T 1z56_C 80 PNWVLDCIAYKRLILIEPNYC 100 (264)
T ss_dssp SSTTHHHHSSCSCCCCCSCBS
T ss_pred chHHHHHhhcCCCCCCChHHh
Confidence 999999999999999998843
No 42
>1t15_A Breast cancer type 1 susceptibility protein; protein-peptide complex, antitumor protein; HET: SEP; 1.85A {Homo sapiens} SCOP: c.15.1.3 c.15.1.3 PDB: 1jnx_X* 1t29_A* 1t2v_A* 1y98_A* 3coj_X* 3k0h_A* 3k0k_A* 3pxe_A* 3pxb_A 3pxc_X 1t2u_A 1n5o_X 3pxa_A 3k15_A* 3k16_A* 3pxd_A 2ing_X 1oqa_A
Probab=98.85 E-value=2e-09 Score=91.69 Aligned_cols=91 Identities=15% Similarity=0.229 Sum_probs=68.4
Q ss_pred hheeecceeEEeeccCCCCccchhHHHHHHHHhCCeEecccCCC----ccE-EEEcCCC--CCcHHH-HHHHHCCCceec
Q 041003 189 QRQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVYNLS----VAQ-VVSVSSR--LGIKGH-RLAEQHNKFLVH 260 (282)
Q Consensus 189 r~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~~~----vTH-lV~~~~~--~~t~K~-~~A~~~gi~IV~ 260 (282)
+..+|.|+.++|+|.+.. +.+..+.++++.+||++..++... .+| +|+...+ ....++ ..|.+.|+++|+
T Consensus 112 ~~~lF~g~~~~~~~~~~~--~~~~~l~~li~~~GG~v~~~~~~~~~~~~~~~ivi~~~~~~~~~~~~~~~a~~~~~~iV~ 189 (214)
T 1t15_A 112 DRKIFRGLEICCYGPFTN--MPTDQLEWMVQLCGASVVKELSSFTLGTGVHPIVVVQPDAWTEDNGFHAIGQMCEAPVVT 189 (214)
T ss_dssp TSCTTTTCEEEECSCCSS--SCHHHHHHHHHHTTCEECCSGGGCCCSTTCCEEEEECGGGCSSCGGGGSSTTTCSSCEEE
T ss_pred CCcccCCCEEEEEecCCC--CCHHHHHHHHHHCCCEEecCccccccCCCCccEEEECCCcccchhhHHHHHHhcCCcEEe
Confidence 467999999999886543 347889999999999999887652 234 5554211 112233 245667999999
Q ss_pred HHHHHHHHHhCCcCCCCCCCC
Q 041003 261 PQWIYAAYYLWSRQVEKDYFP 281 (282)
Q Consensus 261 ~~WL~~c~~~~~r~~E~~y~~ 281 (282)
++||.+|+..++.+||++|.+
T Consensus 190 ~~Wi~dsi~~~~~l~~~~Y~l 210 (214)
T 1t15_A 190 REWVLDSVALYQCQELDTYLI 210 (214)
T ss_dssp HHHHHHHHHHTSCCCSGGGBC
T ss_pred ccHHHHhHhhcCcCCCcceee
Confidence 999999999999999999965
No 43
>3u3z_A Microcephalin; DNA repair, cell cycle regulation, cell cycle; HET: SEP PTR; 1.50A {Homo sapiens} PDB: 3szm_A* 3t1n_A* 3sht_A 3shv_A*
Probab=98.75 E-value=5.6e-09 Score=88.74 Aligned_cols=81 Identities=11% Similarity=0.134 Sum_probs=63.2
Q ss_pred hheeeccee-EEeeccCCCCccchhHHHHHHHHhCCeEecccCCCccEEEEcCCCCCcHHHHHHHHCCCceecHHHHHHH
Q 041003 189 QRQILVRCT-LFFSRDVDDKEFEFPLLKWRAGELGAACTDVYNLSVAQVVSVSSRLGIKGHRLAEQHNKFLVHPQWIYAA 267 (282)
Q Consensus 189 r~~vl~G~~-i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~~~t~K~~~A~~~gi~IV~~~WL~~c 267 (282)
+..+|.|+. +++++... +.+..+..+++.+||++..++. .++.+|+. ... ++..++++|+|+||.+|
T Consensus 116 ~~~LF~g~~~~~v~~~~~---~~~~~L~~lI~~~GG~v~~~~~-~~~iiI~~--~~~------~~~~~~~~V~p~Wi~Ds 183 (199)
T 3u3z_A 116 RGTLFADQPVMFVSPASS---PPVAKLCELVHLCGGRVSQVPR-QASIVIGP--YSG------KKKATVKYLSEKWVLDS 183 (199)
T ss_dssp CCCTTTTSCCEEECTTCS---SCHHHHHHHHHHTTCCBCSSGG-GCSEEESC--CCS------CCCTTCEEECHHHHHHH
T ss_pred cchhhCCCeEEEECCCCC---CCHHHHHHHHHHcCCEEeccCC-CCEEEEeC--Cch------hccCCCcEEChhHHHHH
Confidence 568999996 55555322 3478899999999999999884 45565544 222 23568999999999999
Q ss_pred HHhCCcCCCCCCCC
Q 041003 268 YYLWSRQVEKDYFP 281 (282)
Q Consensus 268 ~~~~~r~~E~~y~~ 281 (282)
+..++.+|+++|.+
T Consensus 184 I~~~~llp~~~Y~~ 197 (199)
T 3u3z_A 184 ITQHKVCAPENYLL 197 (199)
T ss_dssp HHHTSCCCGGGGBC
T ss_pred HHcCCcCChHhccC
Confidence 99999999999975
No 44
>1kzy_C Tumor suppressor P53-binding protein 1; tandem-BRCT and linker complexed with non-BRCT protein, three-helix bundle, parallel beta sheet; 2.50A {Homo sapiens} SCOP: c.15.1.4 c.15.1.4 PDB: 1gzh_B
Probab=98.73 E-value=2e-08 Score=88.67 Aligned_cols=90 Identities=17% Similarity=0.086 Sum_probs=68.8
Q ss_pred hheeecceeEEeeccCCCCccchhHHHHHHHHhCCeEecccC---------CCccEEEEcCCCCCcHHHHHHHHCCCcee
Q 041003 189 QRQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVYN---------LSVAQVVSVSSRLGIKGHRLAEQHNKFLV 259 (282)
Q Consensus 189 r~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~---------~~vTHlV~~~~~~~t~K~~~A~~~gi~IV 259 (282)
+..+|.|+.|++++....+ ....+..+++.+||++...+. ...+|+|.........+...|.++|++||
T Consensus 152 ~~~LF~G~~I~i~~~~~~~--~~~~~~~Il~~~Ga~vv~~~~s~~~~~d~~~~~~~viv~d~~~~~~~~~~a~~~~i~iV 229 (259)
T 1kzy_C 152 RENPFQNLKVLLVSDQQQN--FLELWSEILMTGGAASVKQHHSSAHNKDIALGVFDVVVTDPSCPASVLKCAEALQLPVV 229 (259)
T ss_dssp CCCTTTTCEEEEEESCTTT--THHHHHHHHHHTTCSEEEEEESSSSCCCSCGGGCSEEEECTTCCHHHHHHHHHHTCCEE
T ss_pred cCCCCCCeEEEEecCCCCC--HHHHHHHHHHhcCCEEEeccccchhhhhccCCCCeEEEECCCChHHHHHHHHhcCCCEe
Confidence 5689999999998875332 134556799999999876653 24677776632223466678888999999
Q ss_pred cHHHHHHHHHhCCcCCCCCCC
Q 041003 260 HPQWIYAAYYLWSRQVEKDYF 280 (282)
Q Consensus 260 ~~~WL~~c~~~~~r~~E~~y~ 280 (282)
+.+||.+|+..++.+|+..++
T Consensus 230 s~EWv~~sI~~~~ll~~~~hp 250 (259)
T 1kzy_C 230 SQEWVIQCLIVGERIGFKQHP 250 (259)
T ss_dssp CHHHHHHHHHHTSCCCTTSSG
T ss_pred cHHHHHHHHHhCCcCCCCcCc
Confidence 999999999999999998764
No 45
>2etx_A Mediator of DNA damage checkpoint protein 1; tandem BRCT domains histone gamma-H2AX, cell cycle; 1.33A {Homo sapiens} PDB: 2azm_A* 3k05_A* 2ado_A
Probab=98.55 E-value=9.4e-08 Score=81.60 Aligned_cols=87 Identities=11% Similarity=0.103 Sum_probs=68.3
Q ss_pred heeecceeEEeeccCCCCccchhHHHHHHHHhCCeEecccCCCc--cEEEEcCCCCCcHHHHHHHHCCCceecHHHHHHH
Q 041003 190 RQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVYNLSV--AQVVSVSSRLGIKGHRLAEQHNKFLVHPQWIYAA 267 (282)
Q Consensus 190 ~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~~~v--THlV~~~~~~~t~K~~~A~~~gi~IV~~~WL~~c 267 (282)
..+|.|+.|++++... +....+.++++..||++.....+.. +|+|.+. .....++..+.+.|+++|+++||.+|
T Consensus 113 ~~lF~g~~~~~~~~~~---~~~~~l~~li~~~GG~v~~~~~~~~~~~~ivI~~-~~d~~~~~~~~~~~i~vvs~eWi~~s 188 (209)
T 2etx_A 113 RRLLEGYEIYVTPGVQ---PPPPQMGEIISCCGGTYLPSMPRSYKPQRVVITC-PQDFPHCSIPLRVGLPLLSPEFLLTG 188 (209)
T ss_dssp SCTTTTCEEEECTTCS---SCHHHHHHHHHHTTCEECSSCCCSCCTTEEEECC-GGGGGGCHHHHHHTCCEECTHHHHHH
T ss_pred CCCcCCcEEEEeCCCC---CCHHHHHHHHHHCCCEEECCCCCCCCCceEEEEC-cccHHHHHHHHHCCCeEEcHHHHHHH
Confidence 4799999999987643 2367889999999999998876643 6887763 22344566677889999999999999
Q ss_pred HHhCCcCCCCCCCC
Q 041003 268 YYLWSRQVEKDYFP 281 (282)
Q Consensus 268 ~~~~~r~~E~~y~~ 281 (282)
+...+ ++++.|..
T Consensus 189 I~~q~-ld~e~y~l 201 (209)
T 2etx_A 189 VLKQE-AKPEAFVL 201 (209)
T ss_dssp HHHTC-CCGGGGBC
T ss_pred HHhcc-cChHHhee
Confidence 99855 69888853
No 46
>2nte_A BARD-1, BRCA1-associated ring domain protein 1; BRCT, ring finger, zinc-binding protein, ubiquitin LI antitumor protein; 1.90A {Homo sapiens} PDB: 3fa2_A 2r1z_A
Probab=98.50 E-value=6.8e-08 Score=82.33 Aligned_cols=84 Identities=7% Similarity=-0.026 Sum_probs=62.9
Q ss_pred heeecceeEEeeccCCCCccchhHHHHHHHHhCCeEeccc-------C----------------CCccEEEEcCCCCCcH
Q 041003 190 RQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVY-------N----------------LSVAQVVSVSSRLGIK 246 (282)
Q Consensus 190 ~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~-------~----------------~~vTHlV~~~~~~~t~ 246 (282)
..+|.|+.++++|.+.. +.+..+.++++..||++.... + +.+||+|.. +++..
T Consensus 102 ~~lF~g~~~~l~~~~~~--~~~~~l~~lI~~~GG~v~~~~p~~~~~~~~~~~~v~~~~~~~~~~~~~t~~iv~--~~~~~ 177 (210)
T 2nte_A 102 PKLFDGCYFYLWGTFKH--HPKDNLIKLVTAGGGQILSRKPKPDSDVTQTINTVAYHARPDSDQRFCTQYIIY--EDLCN 177 (210)
T ss_dssp CCTTTTCEEEECSCCSS--SCHHHHHHHHHHTTCEEESSCCCGGGCGGGSSCCCCTTSCTTCGGGTCCEEEEE--CSCSS
T ss_pred ccccCceEEEEeccCCC--CCHHHHHHHHHHCCCEEEecCCCCccccccccceeeeccCCCcccccceEEEEe--ccccc
Confidence 57999999999985432 357899999999999998521 1 357899887 43321
Q ss_pred H-HHHHHHCCCceecHHHHHHHHHhCCcCCCC
Q 041003 247 G-HRLAEQHNKFLVHPQWIYAAYYLWSRQVEK 277 (282)
Q Consensus 247 K-~~~A~~~gi~IV~~~WL~~c~~~~~r~~E~ 277 (282)
. ...|.+.++++|+++||.+|+..++.+|.+
T Consensus 178 ~~~~~~~~~~v~~V~~~Wl~dcI~~~~llp~~ 209 (210)
T 2nte_A 178 YHPERVRQGKVWKAPSSWFIDCVMSFELLPLD 209 (210)
T ss_dssp CCCSCSEETTEEEEEHHHHHHHHHHTSCCCSC
T ss_pred cCHHHHhccCcccccHHHHHHHHHhCeeccCC
Confidence 1 112334578999999999999999999865
No 47
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=98.19 E-value=3.6e-06 Score=69.34 Aligned_cols=106 Identities=12% Similarity=0.076 Sum_probs=69.1
Q ss_pred cCCCeeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHhcC-ceEEEEcCC
Q 041003 8 RQKKLHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKASKM-YDIYLCTTR 86 (282)
Q Consensus 8 ~~~kl~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~~~-yei~i~T~~ 86 (282)
.++..++++|+|+||+......-.. . ..-.+.+.||+.++|+.+.+. |.++|.|++
T Consensus 11 ~~~~k~~~~D~Dgtl~~~~~~~~~~----------------------~-~~~~~~~~pg~~e~L~~L~~~G~~l~i~Tn~ 67 (176)
T 2fpr_A 11 GSSQKYLFIDRDGTLISEPPSDFQV----------------------D-RFDKLAFEPGVIPQLLKLQKAGYKLVMITNQ 67 (176)
T ss_dssp --CCEEEEECSBTTTBCCC--CCCC----------------------C-SGGGCCBCTTHHHHHHHHHHTTEEEEEEEEC
T ss_pred CCcCcEEEEeCCCCeEcCCCCCcCc----------------------C-CHHHCcCCccHHHHHHHHHHCCCEEEEEECC
Confidence 4567889999999999874310000 0 000135789999999999765 999999999
Q ss_pred ---------------cHHHHHHHHhhhcCCCcccccccEE-E----ccCCCC------CceeccccccccCCceEEEcCC
Q 041003 87 ---------------IRSYAMMMAKLLNPKCEYHISSRLI-T----REDFKE------KGKKSGDLVLRQEWGVVIVDDT 140 (282)
Q Consensus 87 ---------------~~~Ya~~v~~~ldp~~~~f~~~rv~-~----r~~~~~------~~~KdL~~l~~~~~~vvivDd~ 140 (282)
.+.++..+++.++-. | +.++ + .+++.. .+.+-++.++-+++++++|+|+
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---f--d~v~~s~~~~~~~~~~~KP~p~~~~~~~~~~gi~~~~~l~VGD~ 142 (176)
T 2fpr_A 68 DGLGTQSFPQADFDGPHNLMMQIFTSQGVQ---F--DEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDR 142 (176)
T ss_dssp TTTTBTTBCHHHHHHHHHHHHHHHHHTTCC---E--EEEEEECCCGGGCCSSSTTSCGGGGGGC----CCGGGCEEEESS
T ss_pred ccccccccchHhhhhhHHHHHHHHHHcCCC---e--eEEEEcCCCCcccccccCCCHHHHHHHHHHcCCCHHHEEEEcCC
Confidence 688888898887654 6 4554 4 244331 1223344555578899999999
Q ss_pred h
Q 041003 141 E 141 (282)
Q Consensus 141 ~ 141 (282)
+
T Consensus 143 ~ 143 (176)
T 2fpr_A 143 A 143 (176)
T ss_dssp H
T ss_pred H
Confidence 8
No 48
>1dgs_A DNA ligase; AMP complex, NAD+-dependent; HET: DNA AMP; 2.90A {Thermus filiformis} SCOP: a.60.2.2 b.40.4.6 d.142.2.2 PDB: 1v9p_A*
Probab=98.15 E-value=2.7e-07 Score=91.09 Aligned_cols=77 Identities=14% Similarity=0.039 Sum_probs=0.0
Q ss_pred heeecceeEEeeccCCCCccchhHHHHHHHHhCCeEecccCCCccEEEEcCCCCCcHHHHHHHHCCCceecHHHHHHHHH
Q 041003 190 RQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVYNLSVAQVVSVSSRLGIKGHRLAEQHNKFLVHPQWIYAAYY 269 (282)
Q Consensus 190 ~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~~~t~K~~~A~~~gi~IV~~~WL~~c~~ 269 (282)
..+|.|.+++|||.++. ++..+..+++.+||+++.++++++++||++ ...+.|..+|.+.||+|++.+|+.+.+.
T Consensus 585 ~~~l~G~~~v~TG~l~~---~R~e~~~~i~~~Ggkv~~sVSkkTd~lV~G--~~~gsKl~KA~~lgI~Ii~E~~f~~~l~ 659 (667)
T 1dgs_A 585 SDLLSGLTFVLTGELSR---PREEVKALLGRLGAKVTDSVSRKTSYLVVG--ENPGSKLEKARALGVAVLTEEEFWRFLK 659 (667)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCCCEEEEeCCCCC---CHHHHHHHHHHcCCEEcCcccCCeeEEEEC--CCCChHHHHHHHCCCeEEeHHHHHHHHh
Confidence 45799999999999875 378899999999999999999999999999 5556899999999999999999999886
Q ss_pred hC
Q 041003 270 LW 271 (282)
Q Consensus 270 ~~ 271 (282)
..
T Consensus 660 ~~ 661 (667)
T 1dgs_A 660 EK 661 (667)
T ss_dssp --
T ss_pred cC
Confidence 54
No 49
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=98.12 E-value=2.2e-06 Score=70.93 Aligned_cols=122 Identities=15% Similarity=-0.033 Sum_probs=73.3
Q ss_pred CCCeeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHhcC-ceEEEEcCCc
Q 041003 9 QKKLHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKASKM-YDIYLCTTRI 87 (282)
Q Consensus 9 ~~kl~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~~~-yei~i~T~~~ 87 (282)
.+...+++||||||+........+++... .... . ......-.+...||+.++|+.+.+. +.++|.|++.
T Consensus 25 ~~~k~vifDlDGTL~~~~~~~~~~~~~~~-------~~~~-~--~~~~~~~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~ 94 (187)
T 2wm8_A 25 RLPKLAVFDLDYTLWPFWVDTHVDPPFHK-------SSDG-T--VRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRTS 94 (187)
T ss_dssp TSCSEEEECSBTTTBSSCTTTSSCSCCEE-------CTTS-C--EECTTCCEECCCTTHHHHHHHHHHHTCCEEEEECCS
T ss_pred hccCEEEEcCCCCcchHHHhhccCcchhh-------hccc-c--hhhccCcccCcchhHHHHHHHHHHCCceEEEEeCCC
Confidence 34568899999999754322111111000 0000 0 0011112356899999999999764 9999999999
Q ss_pred -HHHHHHHHhhhcCCCcccccccEEEccCCCC-CceeccccccccCCceEEEcCChhh
Q 041003 88 -RSYAMMMAKLLNPKCEYHISSRLITREDFKE-KGKKSGDLVLRQEWGVVIVDDTEKV 143 (282)
Q Consensus 88 -~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~-~~~KdL~~l~~~~~~vvivDd~~~~ 143 (282)
+.++..+++.++-.. +| +.++....... .+.+-++.++-+.+++++|+|++.-
T Consensus 95 ~~~~~~~~l~~~gl~~-~f--~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~igD~~~D 149 (187)
T 2wm8_A 95 EIEGANQLLELFDLFR-YF--VHREIYPGSKITHFERLQQKTGIPFSQMIFFDDERRN 149 (187)
T ss_dssp CHHHHHHHHHHTTCTT-TE--EEEEESSSCHHHHHHHHHHHHCCCGGGEEEEESCHHH
T ss_pred ChHHHHHHHHHcCcHh-hc--ceeEEEeCchHHHHHHHHHHcCCChHHEEEEeCCccC
Confidence 799999999987654 45 33322211100 1222334455578899999999743
No 50
>2owo_A DNA ligase; protein-DNA complex, ligase-DNA complex; HET: DNA OMC AMP; 2.30A {Escherichia coli}
Probab=98.11 E-value=3.7e-07 Score=90.08 Aligned_cols=76 Identities=12% Similarity=-0.012 Sum_probs=0.0
Q ss_pred heeecceeEEeeccCCCCccchhHHHHHHHHhCCeEecccCCCccEEEEcCCCCCcHHHHHHHHCCCceecHHHHHHHHH
Q 041003 190 RQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVYNLSVAQVVSVSSRLGIKGHRLAEQHNKFLVHPQWIYAAYY 269 (282)
Q Consensus 190 ~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~~~t~K~~~A~~~gi~IV~~~WL~~c~~ 269 (282)
..+|.|.+++|||.++.- ++..+..+++.+||+++.++++++++||++ ...+.|..+|.+.||+|++.+|+.+.+.
T Consensus 595 ~~~l~G~~~v~TG~l~~~--~R~e~~~~i~~~Ggkv~~sVSkkTd~lV~G--~~~gsKl~KA~~lgI~Ii~E~~f~~~l~ 670 (671)
T 2owo_A 595 DSPFAGKTVVLTGSLSQM--SRDDAKARLVELGAKVAGSVSKKTDLVIAG--EAAGSKLAKAQELGIEVIDEAEMLRLLG 670 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcccCcEEEEcCCCCCC--CHHHHHHHHHHcCCEEeCcccCceeEEEEC--CCCChHHHHHHHCCCcEEcHHHHHHHhc
Confidence 457999999999998653 478899999999999999999999999999 5566899999999999999999988753
No 51
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=98.09 E-value=9.4e-07 Score=68.41 Aligned_cols=79 Identities=13% Similarity=0.076 Sum_probs=57.2
Q ss_pred ecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCC--CC----ceeccccccccCCceE
Q 041003 63 VRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFK--EK----GKKSGDLVLRQEWGVV 135 (282)
Q Consensus 63 ~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~--~~----~~KdL~~l~~~~~~vv 135 (282)
..||+.++|+.+.+. +.++|.|++...++..+++.++-.. +| +.+++.+++. ++ +.+-++.++-+.++++
T Consensus 19 ~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~-~f--~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 95 (137)
T 2pr7_A 19 DQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNG-VV--DKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCV 95 (137)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTT-SS--SEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEE
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHh-hc--cEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 468999999999865 9999999999999999998875443 46 5566655432 11 2222344455778999
Q ss_pred EEcCChhhh
Q 041003 136 IVDDTEKVW 144 (282)
Q Consensus 136 ivDd~~~~~ 144 (282)
+|+|++.-.
T Consensus 96 ~vgD~~~di 104 (137)
T 2pr7_A 96 LVDDSILNV 104 (137)
T ss_dssp EEESCHHHH
T ss_pred EEcCCHHHH
Confidence 999998544
No 52
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=98.05 E-value=4e-06 Score=69.55 Aligned_cols=106 Identities=13% Similarity=0.099 Sum_probs=72.4
Q ss_pred eeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHhcC-ceEEEEcCCcH--
Q 041003 12 LHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKASKM-YDIYLCTTRIR-- 88 (282)
Q Consensus 12 l~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~~~-yei~i~T~~~~-- 88 (282)
..+++|+|+||+......-.. . +. . ..-.+...||+.++|+.+.+. +.++|.|++..
T Consensus 4 k~vifD~DgtL~~~~~~~y~~-~---~~---------------~-~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~ 63 (189)
T 3ib6_A 4 THVIWDMGETLNTVPNTRYDH-H---PL---------------D-TYPEVVLRKNAKETLEKVKQLGFKQAILSNTATSD 63 (189)
T ss_dssp CEEEECTBTTTBCCCTTSSCS-S---CG---------------G-GCTTCCBCTTHHHHHHHHHHTTCEEEEEECCSSCC
T ss_pred eEEEEcCCCceeeccchhhhh-H---HH---------------h-ccCCceeCcCHHHHHHHHHHCCCEEEEEECCCccc
Confidence 478999999998843211000 0 00 0 000145889999999999765 99999999887
Q ss_pred -HHHHHHHhhhcCCCcccccccEEEccCC----C--C----CceeccccccccCCceEEEcCC
Q 041003 89 -SYAMMMAKLLNPKCEYHISSRLITREDF----K--E----KGKKSGDLVLRQEWGVVIVDDT 140 (282)
Q Consensus 89 -~Ya~~v~~~ldp~~~~f~~~rv~~r~~~----~--~----~~~KdL~~l~~~~~~vvivDd~ 140 (282)
.++..+++.+.-.. +| +.+++.++. . + .+.+-+++++-+.+++++|+|+
T Consensus 64 ~~~~~~~l~~~gl~~-~f--d~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~VGD~ 123 (189)
T 3ib6_A 64 TEVIKRVLTNFGIID-YF--DFIYASNSELQPGKMEKPDKTIFDFTLNALQIDKTEAVMVGNT 123 (189)
T ss_dssp HHHHHHHHHHTTCGG-GE--EEEEECCTTSSTTCCCTTSHHHHHHHHHHHTCCGGGEEEEESB
T ss_pred hHHHHHHHHhcCchh-he--EEEEEccccccccCCCCcCHHHHHHHHHHcCCCcccEEEECCC
Confidence 89999998887654 67 667777653 1 1 1223344455678999999999
No 53
>2vxb_A DNA repair protein RHP9; BRCT, nucleus, cell cycle, DNA damage, DNA replication inhibitor, phosphoprotein, checkpoint signalling; HET: DNA; 2.3A {Schizosaccharomyces pombe} PDB: 2vxc_A*
Probab=98.02 E-value=6e-06 Score=71.97 Aligned_cols=81 Identities=17% Similarity=0.154 Sum_probs=59.1
Q ss_pred hheeecceeEEeeccCCCC--------c--cchhHHHHHHHHhCCeE--ecccCCCccEEEEcCCCCCcHHHHHHHHCCC
Q 041003 189 QRQILVRCTLFFSRDVDDK--------E--FEFPLLKWRAGELGAAC--TDVYNLSVAQVVSVSSRLGIKGHRLAEQHNK 256 (282)
Q Consensus 189 r~~vl~G~~i~fsg~~~~~--------~--~~~~~l~~~~~~~Ga~v--~~~~~~~vTHlV~~~~~~~t~K~~~A~~~gi 256 (282)
|..+|.|++|++.+-.... + +.......+++.+||++ .++++...+|+|... .+. .|.+.++
T Consensus 148 ~~~Lf~g~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~Ga~~~~v~~~~~~~~d~v~~~--~~~----~~~~~~~ 221 (241)
T 2vxb_A 148 RKGPLFGKKILFIIPEAKSWQKKIENTEQGQKALAHVYHALALGADVEIRPNVAHLECDLILTM--DGN----IVDETNC 221 (241)
T ss_dssp CCCTTTTCEEEECCCC------------CHHHHHHHHHHHHHTTCEEECCSCCSSCCCSEEECS--SSC----CCSSCSS
T ss_pred cCcCCCCcEEEEEeCCCcccccccccccccchHHHHHHHHHHcCCceecccccccCCccEEEEC--Ccc----ccccCCC
Confidence 5789999999986431110 0 01255677999999999 555666788999873 222 1556799
Q ss_pred ceecHHHHHHHHHhCCcCC
Q 041003 257 FLVHPQWIYAAYYLWSRQV 275 (282)
Q Consensus 257 ~IV~~~WL~~c~~~~~r~~ 275 (282)
+||+++|+.+|+..++++|
T Consensus 222 ~iV~~eWv~~~i~~g~~l~ 240 (241)
T 2vxb_A 222 PVVDPEWIVECLISQSDIS 240 (241)
T ss_dssp CEECHHHHHHHHHHTSCTT
T ss_pred CEecHHHHHHHHHhceecC
Confidence 9999999999999999886
No 54
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=97.99 E-value=9.6e-06 Score=66.11 Aligned_cols=101 Identities=10% Similarity=0.002 Sum_probs=67.3
Q ss_pred eeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHhcC-ceEEEEcCCcH--
Q 041003 12 LHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKASKM-YDIYLCTTRIR-- 88 (282)
Q Consensus 12 l~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~~~-yei~i~T~~~~-- 88 (282)
..+++|+||||+.....-... . -.+...||+.++|+.+.+. +.++|.|++..
T Consensus 2 k~v~~D~DGtL~~~~~~~~~~-~------------------------~~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~ 56 (179)
T 3l8h_A 2 KLIILDRDGVVNQDSDAFVKS-P------------------------DEWIALPGSLQAIARLTQADWTVVLATNQSGLA 56 (179)
T ss_dssp CEEEECSBTTTBCCCTTCCCS-G------------------------GGCCBCTTHHHHHHHHHHTTCEEEEEEECTTTT
T ss_pred CEEEEcCCCccccCCCccCCC-H------------------------HHceECcCHHHHHHHHHHCCCEEEEEECCCccc
Confidence 368999999999864211000 0 0134789999999999765 99999999987
Q ss_pred -------------HHHHHHHhhhcCCCcccccccEEE-----ccCCCC------CceeccccccccCCceEEEcCChh
Q 041003 89 -------------SYAMMMAKLLNPKCEYHISSRLIT-----REDFKE------KGKKSGDLVLRQEWGVVIVDDTEK 142 (282)
Q Consensus 89 -------------~Ya~~v~~~ldp~~~~f~~~rv~~-----r~~~~~------~~~KdL~~l~~~~~~vvivDd~~~ 142 (282)
.++..+++.+. .+| +.+++ .+++.. .+.+-++.++-+++++++|+|+..
T Consensus 57 ~~~~~~~~~~~~~~~~~~~l~~~g---~~~--~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~ 129 (179)
T 3l8h_A 57 RGLFDTATLNAIHDKMHRALAQMG---GVV--DAIFMCPHGPDDGCACRKPLPGMYRDIARRYDVDLAGVPAVGDSLR 129 (179)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHTT---CCC--CEEEEECCCTTSCCSSSTTSSHHHHHHHHHHTCCCTTCEEEESSHH
T ss_pred cCcCCHHHHHHHHHHHHHHHHhCC---Cce--eEEEEcCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHEEEECCCHH
Confidence 67777777776 334 33443 233321 122334445568899999999873
No 55
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=97.98 E-value=2.1e-05 Score=66.14 Aligned_cols=80 Identities=9% Similarity=-0.015 Sum_probs=60.4
Q ss_pred EEEecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC------CceeccccccccCC
Q 041003 60 LVKVRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE------KGKKSGDLVLRQEW 132 (282)
Q Consensus 60 ~v~~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~------~~~KdL~~l~~~~~ 132 (282)
.....|++.++|+.+.+. +.++|+|++.+.++..+++.+.-.. +| +.+++.++... .+.+=++.++-+.+
T Consensus 101 ~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-~f--~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~ 177 (231)
T 3kzx_A 101 NFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTH-YF--DSIIGSGDTGTIKPSPEPVLAALTNINIEPS 177 (231)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGG-GC--SEEEEETSSSCCTTSSHHHHHHHHHHTCCCS
T ss_pred cceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchh-he--eeEEcccccCCCCCChHHHHHHHHHcCCCcc
Confidence 357899999999999865 9999999999999999999876543 56 56677666542 11223344555677
Q ss_pred -ceEEEcCChh
Q 041003 133 -GVVIVDDTEK 142 (282)
Q Consensus 133 -~vvivDd~~~ 142 (282)
++++|+|++.
T Consensus 178 ~~~v~vGD~~~ 188 (231)
T 3kzx_A 178 KEVFFIGDSIS 188 (231)
T ss_dssp TTEEEEESSHH
T ss_pred cCEEEEcCCHH
Confidence 8999999984
No 56
>3sqd_A PAX-interacting protein 1; tandem BRCT domains, cell cycle; HET: SEP; 2.15A {Homo sapiens}
Probab=97.97 E-value=1.6e-05 Score=68.26 Aligned_cols=85 Identities=6% Similarity=-0.032 Sum_probs=64.3
Q ss_pred hheeecceeEEeeccCCCCccchhHHHHHHHHhCCeEecccCCC-------------ccEEEEcCCCCCcHHHHHHHHCC
Q 041003 189 QRQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVYNLS-------------VAQVVSVSSRLGIKGHRLAEQHN 255 (282)
Q Consensus 189 r~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~~~-------------vTHlV~~~~~~~t~K~~~A~~~g 255 (282)
+..+|.|+.+++++.+. +....+.++++..||++.....+. -..||+. +.....+..+.+.|
T Consensus 119 ~~~LF~G~~f~it~~~~---~~~~~l~~lI~~~GG~v~~~~p~~~~~~~~~~~~~~~~~ivis~--~~d~~~~~~~~~~~ 193 (219)
T 3sqd_A 119 VSPLFKAKYFYITPGIC---PSLSTMKAIVECAGGKVLSKQPSFRKLMEHKQNSSLSEIILISC--ENDLHLCREYFARG 193 (219)
T ss_dssp HSCTTTTEEEEECTTCS---SCHHHHHHHHHHTTCEEESSCCCHHHHHHHHHCTTSCEEEEEEC--GGGGGGGHHHHHTT
T ss_pred cccccCCcEEEEeCCCC---CCHHHHHHHHHHCCCEEECCCCchHHhhhhhcccCCCCEEEEec--ccHHHHHHHHHHCC
Confidence 57899999999998654 337789999999999999886431 2334444 44566677788889
Q ss_pred CceecHHHHHHHHHhCCcCCCCCC
Q 041003 256 KFLVHPQWIYAAYYLWSRQVEKDY 279 (282)
Q Consensus 256 i~IV~~~WL~~c~~~~~r~~E~~y 279 (282)
++|++++||.+|+-+.+ ++=+.|
T Consensus 194 ~~v~s~E~il~~Il~q~-ld~~~~ 216 (219)
T 3sqd_A 194 IDVHNAEFVLTGVLTQT-LDYESY 216 (219)
T ss_dssp CCCEETHHHHHHHHHTC-CCTTTS
T ss_pred CcEEeHHHHHHHHHhee-ecchhc
Confidence 99999999999999554 454444
No 57
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=97.96 E-value=4.4e-06 Score=69.79 Aligned_cols=79 Identities=16% Similarity=0.125 Sum_probs=63.1
Q ss_pred EEecccHHHHHHHHh-cCceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC------CceeccccccccCCc
Q 041003 61 VKVRSYIRKFLKKAS-KMYDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE------KGKKSGDLVLRQEWG 133 (282)
Q Consensus 61 v~~RP~l~~FL~~~~-~~yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~------~~~KdL~~l~~~~~~ 133 (282)
.+..||+.++|+.+. ..+.+.|.|++.+.++..+++.++-.. +| +.+++.++... .+.+-+++++-++++
T Consensus 83 ~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~-~f--d~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e 159 (216)
T 3kbb_A 83 LKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK-YF--DVMVFGDQVKNGKPDPEIYLLVLERLNVVPEK 159 (216)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GC--SEEECGGGSSSCTTSTHHHHHHHHHHTCCGGG
T ss_pred cccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCc-cc--cccccccccCCCcccHHHHHHHHHhhCCCccc
Confidence 567899999999995 569999999999999999999987664 67 66677766542 234455666778899
Q ss_pred eEEEcCChh
Q 041003 134 VVIVDDTEK 142 (282)
Q Consensus 134 vvivDd~~~ 142 (282)
+++|+|++.
T Consensus 160 ~l~VgDs~~ 168 (216)
T 3kbb_A 160 VVVFEDSKS 168 (216)
T ss_dssp EEEEECSHH
T ss_pred eEEEecCHH
Confidence 999999974
No 58
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=97.93 E-value=2.9e-05 Score=64.29 Aligned_cols=83 Identities=11% Similarity=0.032 Sum_probs=60.7
Q ss_pred EEEEecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC-----CceeccccccccCC
Q 041003 59 FLVKVRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE-----KGKKSGDLVLRQEW 132 (282)
Q Consensus 59 ~~v~~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~-----~~~KdL~~l~~~~~ 132 (282)
......||+.++|+.+.+. +.++|.|++...++..+++.+.-.. +|....+++.+.... .+.+=++.++-+.+
T Consensus 67 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~~~i~~~~~~~~kp~~~~~~~~~~~~g~~~~ 145 (205)
T 3m9l_A 67 QGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLAD-CFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSPS 145 (205)
T ss_dssp EEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GSCGGGEECTTTSCCTTSSHHHHHHHHHTTCCGG
T ss_pred hcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchh-hcCcceEEeCCCCCCCCCHHHHHHHHHHcCCCHH
Confidence 4578899999999999865 9999999999999999999886543 451145666654221 11223344555789
Q ss_pred ceEEEcCChh
Q 041003 133 GVVIVDDTEK 142 (282)
Q Consensus 133 ~vvivDd~~~ 142 (282)
++++|+|+..
T Consensus 146 ~~i~iGD~~~ 155 (205)
T 3m9l_A 146 RMVMVGDYRF 155 (205)
T ss_dssp GEEEEESSHH
T ss_pred HEEEECCCHH
Confidence 9999999984
No 59
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=97.87 E-value=8.7e-06 Score=66.94 Aligned_cols=79 Identities=15% Similarity=0.113 Sum_probs=60.6
Q ss_pred EEecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC------CceeccccccccCCc
Q 041003 61 VKVRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE------KGKKSGDLVLRQEWG 133 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~------~~~KdL~~l~~~~~~ 133 (282)
+...|++.++|+.+.+. +.++|.|++.+.++..+++.+.-.. +| +.+++.+++.. .+.+-++.++-++++
T Consensus 83 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~-~f--~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 159 (216)
T 2pib_A 83 LKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK-YF--DVMVFGDQVKNGKPDPEIYLLVLERLNVVPEK 159 (216)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GC--SEEECGGGSSSCTTSTHHHHHHHHHHTCCGGG
T ss_pred CCcCcCHHHHHHHHHHCCCCEEEEeCCcHHhHHHHHHhcChHH-hc--CEEeecccCCCCCcCcHHHHHHHHHcCCCCce
Confidence 67899999999999766 9999999999999999999886554 56 55666665432 122233445567899
Q ss_pred eEEEcCChh
Q 041003 134 VVIVDDTEK 142 (282)
Q Consensus 134 vvivDd~~~ 142 (282)
+++|+|++.
T Consensus 160 ~i~iGD~~~ 168 (216)
T 2pib_A 160 VVVFEDSKS 168 (216)
T ss_dssp EEEEECSHH
T ss_pred EEEEeCcHH
Confidence 999999973
No 60
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=97.83 E-value=7.9e-06 Score=67.77 Aligned_cols=81 Identities=6% Similarity=-0.011 Sum_probs=59.0
Q ss_pred EEEecccHHHHHHHHhcCceEEEEcCCcHHHHHHHHhhh------cCCCcccccccEEEccCCCC--C----ceeccccc
Q 041003 60 LVKVRSYIRKFLKKASKMYDIYLCTTRIRSYAMMMAKLL------NPKCEYHISSRLITREDFKE--K----GKKSGDLV 127 (282)
Q Consensus 60 ~v~~RP~l~~FL~~~~~~yei~i~T~~~~~Ya~~v~~~l------dp~~~~f~~~rv~~r~~~~~--~----~~KdL~~l 127 (282)
.+...|++.++|+.+.+.+.++|.|++.+.++..+++.+ +- ..+| +.+++.+++.. + +.+=++.+
T Consensus 87 ~~~~~~~~~~~l~~l~~g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l-~~~f--~~~~~~~~~~~~Kp~~~~~~~~~~~~ 163 (211)
T 2i6x_A 87 LEEISAEKFDYIDSLRPDYRLFLLSNTNPYVLDLAMSPRFLPSGRTL-DSFF--DKVYASCQMGKYKPNEDIFLEMIADS 163 (211)
T ss_dssp EEEECHHHHHHHHHHTTTSEEEEEECCCHHHHHHHTSTTSSTTCCCG-GGGS--SEEEEHHHHTCCTTSHHHHHHHHHHH
T ss_pred hcccChHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHhhhccccccCH-HHHc--CeEEeecccCCCCCCHHHHHHHHHHh
Confidence 567899999999999888999999999999998888763 22 2356 55666654432 1 12223445
Q ss_pred cccCCceEEEcCChhh
Q 041003 128 LRQEWGVVIVDDTEKV 143 (282)
Q Consensus 128 ~~~~~~vvivDd~~~~ 143 (282)
+-+++++++|+|++.-
T Consensus 164 ~~~~~~~~~igD~~~D 179 (211)
T 2i6x_A 164 GMKPEETLFIDDGPAN 179 (211)
T ss_dssp CCCGGGEEEECSCHHH
T ss_pred CCChHHeEEeCCCHHH
Confidence 5578999999999853
No 61
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=97.81 E-value=6e-06 Score=69.82 Aligned_cols=79 Identities=16% Similarity=0.121 Sum_probs=58.9
Q ss_pred EecccHHHHHHHHhcCceEEEEcCCcHHHHHHHHhhh---cCCC--cccccccEEEccCCCC--C----ceecccccccc
Q 041003 62 KVRSYIRKFLKKASKMYDIYLCTTRIRSYAMMMAKLL---NPKC--EYHISSRLITREDFKE--K----GKKSGDLVLRQ 130 (282)
Q Consensus 62 ~~RP~l~~FL~~~~~~yei~i~T~~~~~Ya~~v~~~l---dp~~--~~f~~~rv~~r~~~~~--~----~~KdL~~l~~~ 130 (282)
...||+.++|+.+.+.+.++|.|++.+.++..+.+.| ...+ .+| +.+++.+++.. + +.+-++.++-+
T Consensus 112 ~~~~~~~~~l~~l~~~~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~f--d~i~~~~~~~~~KP~~~~~~~~~~~~g~~ 189 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREKYVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYF--EKTYLSYEMKMAKPEPEIFKAVTEDAGID 189 (229)
T ss_dssp CCCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHC--SEEEEHHHHTCCTTCHHHHHHHHHHHTCC
T ss_pred hccHHHHHHHHHHHhcCcEEEEECCChHHHHHHHhhhhhhccCCHHHhC--CEEEeecccCCCCCCHHHHHHHHHHcCCC
Confidence 3579999999999877999999999999999888777 4433 256 56676665432 1 22334455668
Q ss_pred CCceEEEcCChh
Q 041003 131 EWGVVIVDDTEK 142 (282)
Q Consensus 131 ~~~vvivDd~~~ 142 (282)
++++++|+|++.
T Consensus 190 ~~~~~~vGD~~~ 201 (229)
T 4dcc_A 190 PKETFFIDDSEI 201 (229)
T ss_dssp GGGEEEECSCHH
T ss_pred HHHeEEECCCHH
Confidence 899999999983
No 62
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=97.76 E-value=0.00011 Score=61.15 Aligned_cols=78 Identities=9% Similarity=0.003 Sum_probs=59.7
Q ss_pred EEecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC------CceeccccccccCCc
Q 041003 61 VKVRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE------KGKKSGDLVLRQEWG 133 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~------~~~KdL~~l~~~~~~ 133 (282)
....|++.++|+.+.+. +.++|.|++.+.++..+++.+.-.. +| +.+++.+++.. .+.+=++.++-++++
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f--~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 171 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTN-SF--DHLISVDEVRLFKPHQKVYELAMDTLHLGESE 171 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGG-GC--SEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChh-hc--ceeEehhhcccCCCChHHHHHHHHHhCCCccc
Confidence 45789999999999866 9999999999999999999876443 56 56777766542 122233445557899
Q ss_pred eEEEcCCh
Q 041003 134 VVIVDDTE 141 (282)
Q Consensus 134 vvivDd~~ 141 (282)
+++|+|+.
T Consensus 172 ~~~iGD~~ 179 (230)
T 3um9_A 172 ILFVSCNS 179 (230)
T ss_dssp EEEEESCH
T ss_pred EEEEeCCH
Confidence 99999997
No 63
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=97.75 E-value=4.4e-05 Score=64.40 Aligned_cols=104 Identities=9% Similarity=-0.027 Sum_probs=67.4
Q ss_pred cCCCeeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHhc-CceEEEEcCC
Q 041003 8 RQKKLHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKASK-MYDIYLCTTR 86 (282)
Q Consensus 8 ~~~kl~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~~-~yei~i~T~~ 86 (282)
..+...+++|+||||+...... ... . .+...||+.++|+.+.+ -+.++|.|++
T Consensus 22 ~~~~k~v~~D~DGTL~~~~~~~--~~~--------------------~----~~~~~pg~~e~L~~L~~~G~~~~ivTn~ 75 (211)
T 2gmw_A 22 AKSVPAIFLDRDGTINVDHGYV--HEI--------------------D----NFEFIDGVIDAMRELKKMGFALVVVTNQ 75 (211)
T ss_dssp --CBCEEEECSBTTTBCCCSSC--CSG--------------------G----GCCBCTTHHHHHHHHHHTTCEEEEEEEC
T ss_pred hhcCCEEEEcCCCCeECCCCcc--cCc--------------------c----cCcCCcCHHHHHHHHHHCCCeEEEEECc
Confidence 3345589999999999764211 100 0 13467999999999976 5999999999
Q ss_pred c---------------HHHHHHHHhhhcCCCcccccccEEEcc-----------CCC--C----CceeccccccccCCce
Q 041003 87 I---------------RSYAMMMAKLLNPKCEYHISSRLITRE-----------DFK--E----KGKKSGDLVLRQEWGV 134 (282)
Q Consensus 87 ~---------------~~Ya~~v~~~ldp~~~~f~~~rv~~r~-----------~~~--~----~~~KdL~~l~~~~~~v 134 (282)
. ..++..+++.++-. | ..-+++.+ ++. + .+.+-++.++-+.+++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---f-~~~~~~~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~lgi~~~~~ 151 (211)
T 2gmw_A 76 SGIARGKFTEAQFETLTEWMDWSLADRDVD---L-DGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDMAAS 151 (211)
T ss_dssp THHHHTSSCHHHHHHHHHHHHHHHHHTTCC---C-SEEEEECCBTTCSSGGGBSCCSSSTTSCHHHHHHHHHHTBCGGGC
T ss_pred CCcCCCccCHHHHHHHHHHHHHHHHHcCCc---e-EEEEECCcCCCCcccccCccCcCCCCCHHHHHHHHHHcCCCHHHE
Confidence 9 58888888887654 4 22222322 222 1 1122234445578899
Q ss_pred EEEcCCh
Q 041003 135 VIVDDTE 141 (282)
Q Consensus 135 vivDd~~ 141 (282)
++|+|+.
T Consensus 152 ~~VGD~~ 158 (211)
T 2gmw_A 152 YMVGDKL 158 (211)
T ss_dssp EEEESSH
T ss_pred EEEcCCH
Confidence 9999998
No 64
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=97.74 E-value=3.2e-05 Score=65.41 Aligned_cols=79 Identities=14% Similarity=0.118 Sum_probs=60.8
Q ss_pred EEecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCCC------ceecccccccc-CC
Q 041003 61 VKVRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKEK------GKKSGDLVLRQ-EW 132 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~~------~~KdL~~l~~~-~~ 132 (282)
...+||+.++|+.+.+. +.++|.|++.+.++..+++.++-.. +| +.+++.+++... +.+=++.++-+ ++
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f--~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~ 185 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDR-YF--KYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKD 185 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGG-GC--SEEEEECTTSCCCCHHHHHHHHHHHHTCCCGG
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHh-hE--EEEEeccccCCCCCCHHHHHHHHHHcCCCCCC
Confidence 56899999999999876 9999999999999999999886554 56 566777765431 12223344556 89
Q ss_pred ceEEEcCChh
Q 041003 133 GVVIVDDTEK 142 (282)
Q Consensus 133 ~vvivDd~~~ 142 (282)
++++|+|++.
T Consensus 186 ~~i~vGD~~~ 195 (240)
T 3sd7_A 186 KVIMVGDRKY 195 (240)
T ss_dssp GEEEEESSHH
T ss_pred cEEEECCCHH
Confidence 9999999983
No 65
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=97.72 E-value=1.3e-05 Score=67.44 Aligned_cols=78 Identities=5% Similarity=-0.015 Sum_probs=58.7
Q ss_pred EEecccHHHHHHHHhc-CceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC--C----ceeccccccccCCc
Q 041003 61 VKVRSYIRKFLKKASK-MYDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE--K----GKKSGDLVLRQEWG 133 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~-~yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~--~----~~KdL~~l~~~~~~ 133 (282)
+...||+.++|+.+.+ .+.++|.|++.+.++..+++.++-.. +| +.+++.+++.. + +.+=++.++-++++
T Consensus 94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f--~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~ 170 (232)
T 1zrn_A 94 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRD-GF--DHLLSVDPVQVYKPDNRVYELAEQALGLDRSA 170 (232)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GC--SEEEESGGGTCCTTSHHHHHHHHHHHTSCGGG
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHh-hh--heEEEecccCCCCCCHHHHHHHHHHcCCCccc
Confidence 4678999999999976 49999999999999999999876543 56 56677665432 1 12223445557889
Q ss_pred eEEEcCCh
Q 041003 134 VVIVDDTE 141 (282)
Q Consensus 134 vvivDd~~ 141 (282)
+++|+|++
T Consensus 171 ~~~iGD~~ 178 (232)
T 1zrn_A 171 ILFVASNA 178 (232)
T ss_dssp EEEEESCH
T ss_pred EEEEeCCH
Confidence 99999997
No 66
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=97.67 E-value=2.1e-05 Score=67.66 Aligned_cols=80 Identities=11% Similarity=-0.083 Sum_probs=59.9
Q ss_pred EEecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC------CceeccccccccC-C
Q 041003 61 VKVRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE------KGKKSGDLVLRQE-W 132 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~------~~~KdL~~l~~~~-~ 132 (282)
+...||+.++|+.+.+. +.++|.|++.+.++..+++.+.-.+..| +.+++.++... .+.+=++.++-+. +
T Consensus 110 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~ 187 (277)
T 3iru_A 110 SQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTP--ASTVFATDVVRGRPFPDMALKVALELEVGHVN 187 (277)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCC--SEEECGGGSSSCTTSSHHHHHHHHHHTCSCGG
T ss_pred CccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCC--ceEecHHhcCCCCCCHHHHHHHHHHcCCCCCc
Confidence 46789999999999865 9999999999999999999876444325 66676666542 1222334455677 9
Q ss_pred ceEEEcCChh
Q 041003 133 GVVIVDDTEK 142 (282)
Q Consensus 133 ~vvivDd~~~ 142 (282)
++++|+|+..
T Consensus 188 ~~i~vGD~~~ 197 (277)
T 3iru_A 188 GCIKVDDTLP 197 (277)
T ss_dssp GEEEEESSHH
T ss_pred cEEEEcCCHH
Confidence 9999999973
No 67
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=97.65 E-value=3.1e-05 Score=64.24 Aligned_cols=79 Identities=10% Similarity=0.031 Sum_probs=57.0
Q ss_pred EEecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccC-----------CCC-----Cceec
Q 041003 61 VKVRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITRED-----------FKE-----KGKKS 123 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~-----------~~~-----~~~Kd 123 (282)
+..+||+.++|+.+.+. +.++|.|++.+.++..+++.+.-.. +| +.+++.++ +.. .+.+-
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~-~f--~~~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~ 150 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDA-AF--SNTLIVENDALNGLVTGHMMFSHSKGEMLLVL 150 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSE-EE--EEEEEEETTEEEEEEEESCCSTTHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcch-hc--cceeEEeCCEEEeeeccCCCCCCChHHHHHHH
Confidence 56899999999999876 9999999999999999999986554 56 33433222 211 11122
Q ss_pred cccccccCCceEEEcCChh
Q 041003 124 GDLVLRQEWGVVIVDDTEK 142 (282)
Q Consensus 124 L~~l~~~~~~vvivDd~~~ 142 (282)
++.++-++++++.|+|++.
T Consensus 151 ~~~~g~~~~~~i~vGDs~~ 169 (217)
T 3m1y_A 151 QRLLNISKTNTLVVGDGAN 169 (217)
T ss_dssp HHHHTCCSTTEEEEECSGG
T ss_pred HHHcCCCHhHEEEEeCCHH
Confidence 3334557889999999974
No 68
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=97.64 E-value=8.5e-05 Score=69.57 Aligned_cols=108 Identities=15% Similarity=0.066 Sum_probs=72.8
Q ss_pred hcCCCeeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHhc-CceEEEEcC
Q 041003 7 YRQKKLHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKASK-MYDIYLCTT 85 (282)
Q Consensus 7 ~~~~kl~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~~-~yei~i~T~ 85 (282)
...+...+++|+||||+.+....... .. ..-+..+-||+.++|+.|.+ -|.++|.|+
T Consensus 54 ~~~~~k~v~fD~DGTL~~~~~~~~~~-----------~~-----------~~~~~~~~pgv~e~L~~L~~~G~~l~IvTN 111 (416)
T 3zvl_A 54 VKPQGKVAAFDLDGTLITTRSGKVFP-----------TS-----------PSDWRILYPEIPKKLQELAAEGYKLVIFTN 111 (416)
T ss_dssp CCCCSSEEEECSBTTTEECSSCSSSC-----------SS-----------TTCCEESCTTHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCeEEEEeCCCCccccCCCccCC-----------CC-----------HHHhhhhcccHHHHHHHHHHCCCeEEEEeC
Confidence 34456689999999999774321000 00 00123367999999999976 599999999
Q ss_pred Cc------------HHHHHHHHhhhcCCCcccccccEEEccCCCC------Cceecccccc----ccCCceEEEcCCh
Q 041003 86 RI------------RSYAMMMAKLLNPKCEYHISSRLITREDFKE------KGKKSGDLVL----RQEWGVVIVDDTE 141 (282)
Q Consensus 86 ~~------------~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~------~~~KdL~~l~----~~~~~vvivDd~~ 141 (282)
+. +.++..+++.++-. | +.+++.++|.. .+.+-++.++ -+++++++|.|+.
T Consensus 112 ~~gi~~g~~~~~~~~~~~~~~l~~lgl~---f--d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~v~~~~~l~VGDs~ 184 (416)
T 3zvl_A 112 QMGIGRGKLPAEVFKGKVEAVLEKLGVP---F--QVLVATHAGLNRKPVSGMWDHLQEQANEGIPISVEDSVFVGDAA 184 (416)
T ss_dssp CHHHHTTSSCHHHHHHHHHHHHHHHTSC---C--EEEEECSSSTTSTTSSHHHHHHHHHSSTTCCCCGGGCEEECSCS
T ss_pred CccccCCCCCHHHHHHHHHHHHHHcCCC---E--EEEEECCCCCCCCCCHHHHHHHHHHhCCCCCCCHHHeEEEECCC
Confidence 66 34477788777543 6 56777777653 1233344454 4788999999996
No 69
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=97.64 E-value=6.4e-05 Score=63.62 Aligned_cols=78 Identities=12% Similarity=0.004 Sum_probs=58.8
Q ss_pred EEecccHHHHHHHHhc-CceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC--C----ceeccccccccCCc
Q 041003 61 VKVRSYIRKFLKKASK-MYDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE--K----GKKSGDLVLRQEWG 133 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~-~yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~--~----~~KdL~~l~~~~~~ 133 (282)
+...||+.++|+.+.+ .+.++|.|++.+.++..+++.++-.. +| +.+++.++... + +.+=++.++-++++
T Consensus 104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f--~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~ 180 (240)
T 2no4_A 104 LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDR-VL--DSCLSADDLKIYKPDPRIYQFACDRLGVNPNE 180 (240)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GC--SEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGG
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHH-Hc--CEEEEccccCCCCCCHHHHHHHHHHcCCCccc
Confidence 4577999999999976 49999999999999999999876543 56 56777766532 1 12223445567889
Q ss_pred eEEEcCCh
Q 041003 134 VVIVDDTE 141 (282)
Q Consensus 134 vvivDd~~ 141 (282)
+++|+|++
T Consensus 181 ~~~iGD~~ 188 (240)
T 2no4_A 181 VCFVSSNA 188 (240)
T ss_dssp EEEEESCH
T ss_pred EEEEeCCH
Confidence 99999987
No 70
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=97.63 E-value=4.2e-05 Score=64.05 Aligned_cols=72 Identities=8% Similarity=-0.060 Sum_probs=51.6
Q ss_pred EecccHHHHHHHHhc-CceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC------Cceecccccccc-CCc
Q 041003 62 KVRSYIRKFLKKASK-MYDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE------KGKKSGDLVLRQ-EWG 133 (282)
Q Consensus 62 ~~RP~l~~FL~~~~~-~yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~------~~~KdL~~l~~~-~~~ 133 (282)
...||+.++|+.+.+ .+.+.|-|+..+..+..+.+ .+| +.+++.++... .+.+-+++++-. .+.
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~------~~~--d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~ 107 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA------PVN--DWMIAAPRPTAGWPQPDACWMALMALNVSQLEG 107 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT------TTT--TTCEECCCCSSCTTSTHHHHHHHHHTTCSCSTT
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC------ccC--CEEEECCcCCCCCCChHHHHHHHHHcCCCCCcc
Confidence 467999999999975 59999999999988855443 245 56677776532 123344455544 478
Q ss_pred eEEEcCCh
Q 041003 134 VVIVDDTE 141 (282)
Q Consensus 134 vvivDd~~ 141 (282)
+++|.|++
T Consensus 108 ~v~VGDs~ 115 (196)
T 2oda_A 108 CVLISGDP 115 (196)
T ss_dssp CEEEESCH
T ss_pred EEEEeCCH
Confidence 99999997
No 71
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=97.63 E-value=4.2e-05 Score=63.75 Aligned_cols=79 Identities=10% Similarity=0.125 Sum_probs=60.1
Q ss_pred EEecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC------CceeccccccccCCc
Q 041003 61 VKVRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE------KGKKSGDLVLRQEWG 133 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~------~~~KdL~~l~~~~~~ 133 (282)
+...||+.++|+.+.+. +.++|.|++.+.++..+++.+.-.. +| +.+++.++... .+.+=++.++-++++
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f--~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~ 161 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAF-YF--DAIVGSSLDGKLSTKEDVIRYAMESLNIKSDD 161 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGG-GC--SEEEEECTTSSSCSHHHHHHHHHHHHTCCGGG
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHh-he--eeeeccCCCCCCCCCHHHHHHHHHHhCcCccc
Confidence 46889999999999865 9999999999999999999876543 56 56677766542 122233445557789
Q ss_pred eEEEcCChh
Q 041003 134 VVIVDDTEK 142 (282)
Q Consensus 134 vvivDd~~~ 142 (282)
+++|+|+..
T Consensus 162 ~i~iGD~~~ 170 (226)
T 3mc1_A 162 AIMIGDREY 170 (226)
T ss_dssp EEEEESSHH
T ss_pred EEEECCCHH
Confidence 999999983
No 72
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=97.58 E-value=3e-05 Score=66.50 Aligned_cols=77 Identities=5% Similarity=-0.066 Sum_probs=59.1
Q ss_pred EEecccHHHHHHHHhcCceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC--C----ceeccccccccCCce
Q 041003 61 VKVRSYIRKFLKKASKMYDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE--K----GKKSGDLVLRQEWGV 134 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~--~----~~KdL~~l~~~~~~v 134 (282)
+...||+.++|+.+. .+.++|.|++.+.++..+++.++-.. +| +.+++.+++.. + +.+=++.++-+++++
T Consensus 92 ~~~~~~~~~~l~~l~-g~~~~i~t~~~~~~~~~~l~~~gl~~-~f--~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 167 (253)
T 1qq5_A 92 LTPYPDAAQCLAELA-PLKRAILSNGAPDMLQALVANAGLTD-SF--DAVISVDAKRVFKPHPDSYALVEEVLGVTPAEV 167 (253)
T ss_dssp CCBCTTHHHHHHHHT-TSEEEEEESSCHHHHHHHHHHTTCGG-GC--SEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGE
T ss_pred CCCCccHHHHHHHHc-CCCEEEEeCcCHHHHHHHHHHCCchh-hc--cEEEEccccCCCCCCHHHHHHHHHHcCCCHHHE
Confidence 467899999999999 99999999999999999999876433 56 56777766532 1 222334455678899
Q ss_pred EEEcCCh
Q 041003 135 VIVDDTE 141 (282)
Q Consensus 135 vivDd~~ 141 (282)
++|+|++
T Consensus 168 ~~vGD~~ 174 (253)
T 1qq5_A 168 LFVSSNG 174 (253)
T ss_dssp EEEESCH
T ss_pred EEEeCCh
Confidence 9999997
No 73
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=97.56 E-value=7.7e-05 Score=59.76 Aligned_cols=101 Identities=13% Similarity=-0.023 Sum_probs=67.8
Q ss_pred CeeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHhcC-ceEEEEcCCcHH
Q 041003 11 KLHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKASKM-YDIYLCTTRIRS 89 (282)
Q Consensus 11 kl~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~~~-yei~i~T~~~~~ 89 (282)
...+++|+||||+.+... .. ......-...|+..++|+.+.+. +.++|.|++...
T Consensus 9 ~k~v~~DlDGTL~~~~~~--~~----------------------~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~ 64 (162)
T 2p9j_A 9 LKLLIMDIDGVLTDGKLY--YT----------------------EHGETIKVFNVLDGIGIKLLQKMGITLAVISGRDSA 64 (162)
T ss_dssp CCEEEECCTTTTSCSEEE--EE----------------------TTEEEEEEEEHHHHHHHHHHHTTTCEEEEEESCCCH
T ss_pred eeEEEEecCcceECCcee--ec----------------------CCCceeeeecccHHHHHHHHHHCCCEEEEEeCCCcH
Confidence 346899999999986532 11 01123345679999999999865 999999999999
Q ss_pred HHHHHHhhhcCCCcccccccEEEccCCCC-CceeccccccccCCceEEEcCChh
Q 041003 90 YAMMMAKLLNPKCEYHISSRLITREDFKE-KGKKSGDLVLRQEWGVVIVDDTEK 142 (282)
Q Consensus 90 Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~-~~~KdL~~l~~~~~~vvivDd~~~ 142 (282)
++..+++.+.-.. +| .. ..... .+.+-++.++-+.+.+++|+|+..
T Consensus 65 ~~~~~l~~~gl~~-~~-~~-----~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~ 111 (162)
T 2p9j_A 65 PLITRLKELGVEE-IY-TG-----SYKKLEIYEKIKEKYSLKDEEIGFIGDDVV 111 (162)
T ss_dssp HHHHHHHHTTCCE-EE-EC-----C--CHHHHHHHHHHTTCCGGGEEEEECSGG
T ss_pred HHHHHHHHcCCHh-hc-cC-----CCCCHHHHHHHHHHcCCCHHHEEEECCCHH
Confidence 9999999886543 44 11 11100 111223344557789999999983
No 74
>3al2_A DNA topoisomerase 2-binding protein 1; BRCT domain, protein binding, DNA binding protein; HET: DNA MSE; 2.00A {Homo sapiens} PDB: 3al3_A*
Probab=97.47 E-value=5e-05 Score=65.87 Aligned_cols=87 Identities=11% Similarity=0.008 Sum_probs=63.7
Q ss_pred heeecceeEEeeccCCCCccchhHHHHHHHHhCCeEecccCC----CccEEEEcCCC--CC--cHHHHHHHHCCCceecH
Q 041003 190 RQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVYNL----SVAQVVSVSSR--LG--IKGHRLAEQHNKFLVHP 261 (282)
Q Consensus 190 ~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~~----~vTHlV~~~~~--~~--t~K~~~A~~~gi~IV~~ 261 (282)
..+|.|+.++|.+.. +....+.++++..||+|.....+ ..||.++.... .+ ..++..+.+.|++||++
T Consensus 133 ~~lF~g~~v~l~~~~----~~~~~l~~ii~agGg~vl~~~~~~~~~~~t~~~vd~~~~~~~~~~~~~~~~~~~~i~~v~~ 208 (235)
T 3al2_A 133 EGAFSGWKVILHVDQ----SREAGFKRLLQSGGAKVLPGHSVPLFKEATHLFSDLNKLKPDDSGVNIAEAAAQNVYCLRT 208 (235)
T ss_dssp SSTTTTCEEEEECCH----HHHHHHHHHHHHTTCEECSSCCGGGGGGCSEEEECC--------CCCHHHHHHTTCEEEET
T ss_pred CCCCCCcEEEEecCC----CcHHHHHHHHHcCCcEEecCCCCCccccCceEEEecccCCccchhHHHHHHHHcCCcEEcH
Confidence 479999999988631 33567899999999999866432 46898875211 11 12466667789999999
Q ss_pred HHHHHHHHhCCcCCCCCCC
Q 041003 262 QWIYAAYYLWSRQVEKDYF 280 (282)
Q Consensus 262 ~WL~~c~~~~~r~~E~~y~ 280 (282)
+||.+|+-.....+.+.|.
T Consensus 209 ewlld~i~~~~~~~~~~y~ 227 (235)
T 3al2_A 209 EYIADYLMQESPPHVENYC 227 (235)
T ss_dssp HHHHHHHHCSSCCCHHHHB
T ss_pred HHHHHHHhcCCCCChhheE
Confidence 9999999988776666653
No 75
>3huf_A DNA repair and telomere maintenance protein NBS1; NBS1, FHA domain, BRCT domain, phosphoprotein binding, phosp binding, DNA repair; HET: DNA TPO; 2.15A {Schizosaccharomyces pombe} PDB: 3hue_A* 3i0m_A* 3i0n_A*
Probab=97.46 E-value=0.0002 Score=64.15 Aligned_cols=59 Identities=8% Similarity=0.005 Sum_probs=48.5
Q ss_pred hhHHHHHHHHhCCeEeccc-CCCccEEEEcCCC--CCcHHHHHHHHCCCceecHHHHHHHHHh
Q 041003 211 FPLLKWRAGELGAACTDVY-NLSVAQVVSVSSR--LGIKGHRLAEQHNKFLVHPQWIYAAYYL 270 (282)
Q Consensus 211 ~~~l~~~~~~~Ga~v~~~~-~~~vTHlV~~~~~--~~t~K~~~A~~~gi~IV~~~WL~~c~~~ 270 (282)
+..+...++.+|+++. ++ .+.|||||..... .-|.|.-+|.-.|++||+++|+.+....
T Consensus 126 ~~~L~~~L~~LGik~v-~~~~detTHlVm~krnT~KvTvK~L~ALI~gkPIV~~~Fl~al~~~ 187 (325)
T 3huf_A 126 LSQWASNLNLLGIPTG-LRDSDATTHFVMNRQAGSSITVGTMYAFLKKTVIIDDSYLQYLSTV 187 (325)
T ss_dssp HHHHHHHHHTTTCCEE-SSCCTTCCEEECCCCCSSCCCHHHHHHHHTTCEEECHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCEEE-EccCCCEEEEEEeccccccchHHHHHHHHCCCcEecHHHHHHHHHh
Confidence 4558899999999999 88 6789999997211 2256699999999999999999998654
No 76
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=97.42 E-value=3.5e-05 Score=71.55 Aligned_cols=118 Identities=16% Similarity=0.079 Sum_probs=74.4
Q ss_pred cchhcCCCeeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHhcC-ceEEE
Q 041003 4 EMVYRQKKLHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKASKM-YDIYL 82 (282)
Q Consensus 4 ~~l~~~~kl~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~~~-yei~i 82 (282)
..|..++...||+|+||||+...-.. .+.+ .. ...| +.. .-..-||+.++|+.+.+. +.+.|
T Consensus 215 ~~l~~~~iK~lv~DvDnTL~~G~l~~-dG~~---~~-----~~~d-------g~g-~g~~ypgv~e~L~~Lk~~Gi~laI 277 (387)
T 3nvb_A 215 AAIQGKFKKCLILDLDNTIWGGVVGD-DGWE---NI-----QVGH-------GLG-IGKAFTEFQEWVKKLKNRGIIIAV 277 (387)
T ss_dssp HHHTTCCCCEEEECCBTTTBBSCHHH-HCGG---GS-----BCSS-------SSS-THHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHhCCCcEEEEcCCCCCCCCeecC-CCce---eE-----Eecc-------Ccc-ccccCHHHHHHHHHHHHCCCEEEE
Confidence 35677888999999999998865311 1100 00 0111 000 012458999999999865 99999
Q ss_pred EcCCcHHHHHHHHhh-----hcCCCcccccccEEEccCCCC---CceeccccccccCCceEEEcCChhhh
Q 041003 83 CTTRIRSYAMMMAKL-----LNPKCEYHISSRLITREDFKE---KGKKSGDLVLRQEWGVVIVDDTEKVW 144 (282)
Q Consensus 83 ~T~~~~~Ya~~v~~~-----ldp~~~~f~~~rv~~r~~~~~---~~~KdL~~l~~~~~~vvivDd~~~~~ 144 (282)
.|++.+.++..+++. +...+ +| . +. . .... .+.+=++.++-+++.+++|+|++.-.
T Consensus 278 ~Snn~~~~v~~~l~~~~~~~l~l~~-~~--~-v~-~-~~KPKp~~l~~al~~Lgl~pee~v~VGDs~~Di 341 (387)
T 3nvb_A 278 CSKNNEGKAKEPFERNPEMVLKLDD-IA--V-FV-A-NWENKADNIRTIQRTLNIGFDSMVFLDDNPFER 341 (387)
T ss_dssp EEESCHHHHHHHHHHCTTCSSCGGG-CS--E-EE-E-ESSCHHHHHHHHHHHHTCCGGGEEEECSCHHHH
T ss_pred EcCCCHHHHHHHHhhccccccCccC-cc--E-EE-e-CCCCcHHHHHHHHHHhCcCcccEEEECCCHHHH
Confidence 999999999999987 33333 33 2 11 1 1111 22333445566889999999998443
No 77
>3t7k_A RTT107, regulator of TY1 transposition protein 107; BRCT, DNA repair, phospho-peptide, protein binding; HET: SEP; 2.03A {Saccharomyces cerevisiae} PDB: 3t7j_A* 3t7i_A
Probab=97.35 E-value=0.00046 Score=59.74 Aligned_cols=83 Identities=13% Similarity=0.021 Sum_probs=62.3
Q ss_pred ceeEEeeccCCCCccchhHHHHHHHHhCCeEecccCC--CccEEEEcCCCCCcHHHHHHHHCCC--ceecHHHHHHHHHh
Q 041003 195 RCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDVYNL--SVAQVVSVSSRLGIKGHRLAEQHNK--FLVHPQWIYAAYYL 270 (282)
Q Consensus 195 G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~~~--~vTHlV~~~~~~~t~K~~~A~~~gi--~IV~~~WL~~c~~~ 270 (282)
..++++||..... -+..+ .+....+|-.+..++++ .++|++|+. -..|.|+..|.+.|. +|++|+||.+|++.
T Consensus 22 ~i~ai~TGc~~~~-~~~~D-~~~Lr~LGI~Iv~d~~~~~~~n~LiAPk-ilRT~KFL~sLa~~P~~~il~p~FI~~~Lk~ 98 (256)
T 3t7k_A 22 DLKAVCTGCFHDG-FNEVD-IEILNQLGIKIFDNIKETDKLNCIFAPK-ILRTEKFLKSLSFEPLKFALKPEFIIDLLKQ 98 (256)
T ss_dssp CEEEEESSSCSSC-CCHHH-HHHHHHTTEEECSSCCGGGCCCEEECSS-CCCBHHHHHHTTSTTCCEEECTHHHHHHHHH
T ss_pred eEEEEecCCcccc-cCHHH-HHHHHHcCeEEEecCcccCCCCEEEcCc-hhhHHHHHHHhccCccceEeCHHHHHHHHHH
Confidence 4566667764111 12222 56789999999999964 799999993 478999999999876 59999999999998
Q ss_pred ---CC------cCCCCCCC
Q 041003 271 ---WS------RQVEKDYF 280 (282)
Q Consensus 271 ---~~------r~~E~~y~ 280 (282)
.+ .++.++|.
T Consensus 99 ih~~~~~~~~~~l~~~dY~ 117 (256)
T 3t7k_A 99 IHSKKDKLSQININLFDYE 117 (256)
T ss_dssp HC-------CCCCCSSTTB
T ss_pred hhcCCcccccccCChhhcc
Confidence 66 66777774
No 78
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=97.35 E-value=1.6e-05 Score=65.54 Aligned_cols=82 Identities=10% Similarity=0.032 Sum_probs=56.0
Q ss_pred EEEecccHHHHHHHHh-cCceEEEEcCCcHHHHHHHHhh-hcCCCcccccccEEEccCCCC--C----ceeccccccccC
Q 041003 60 LVKVRSYIRKFLKKAS-KMYDIYLCTTRIRSYAMMMAKL-LNPKCEYHISSRLITREDFKE--K----GKKSGDLVLRQE 131 (282)
Q Consensus 60 ~v~~RP~l~~FL~~~~-~~yei~i~T~~~~~Ya~~v~~~-ldp~~~~f~~~rv~~r~~~~~--~----~~KdL~~l~~~~ 131 (282)
++...||+.++|+.+. +.+.++|.|++.+.++..+++. +.-. .+| +.+++.+++.. + +.+-++.++-+.
T Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~-~~f--~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 165 (206)
T 2b0c_A 89 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIR-DAA--DHIYLSQDLGMRKPEARIYQHVLQAEGFSP 165 (206)
T ss_dssp EEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHH-HHC--SEEEEHHHHTCCTTCHHHHHHHHHHHTCCG
T ss_pred hcccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChh-hhe--eeEEEecccCCCCCCHHHHHHHHHHcCCCH
Confidence 4688999999999998 5699999999998887665554 2211 235 45566554321 1 222334455678
Q ss_pred CceEEEcCChhhh
Q 041003 132 WGVVIVDDTEKVW 144 (282)
Q Consensus 132 ~~vvivDd~~~~~ 144 (282)
+++++|+|++.-.
T Consensus 166 ~~~~~vgD~~~Di 178 (206)
T 2b0c_A 166 SDTVFFDDNADNI 178 (206)
T ss_dssp GGEEEEESCHHHH
T ss_pred HHeEEeCCCHHHH
Confidence 8999999998533
No 79
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=97.34 E-value=1.5e-05 Score=66.10 Aligned_cols=40 Identities=8% Similarity=0.172 Sum_probs=34.8
Q ss_pred EEecccHHHHHHHHhc--CceEEEEcCCcHHHHHHHHhhhcC
Q 041003 61 VKVRSYIRKFLKKASK--MYDIYLCTTRIRSYAMMMAKLLNP 100 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~--~yei~i~T~~~~~Ya~~v~~~ldp 100 (282)
+...||+.++|+.+.+ .+.++|.|++.+.++..+++.++-
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl 113 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW 113 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence 4678999999999987 499999999999998888887654
No 80
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=97.34 E-value=5.1e-05 Score=64.04 Aligned_cols=80 Identities=9% Similarity=-0.098 Sum_probs=55.3
Q ss_pred EEecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC--C----ceeccccccccCCc
Q 041003 61 VKVRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE--K----GKKSGDLVLRQEWG 133 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~--~----~~KdL~~l~~~~~~ 133 (282)
....||+.++|+.+.+. +.++|.|++.+.++..+++. .-.. +|..+.+++.+++.. + +.+=++.++-++++
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~-~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~ 184 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPG-IFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPNE 184 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTT-TCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCGGG
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHH-hcCCCeEEecccCCCCCCCCHHHHHHHHHcCCChhh
Confidence 56789999999999765 99999999999999988887 4333 451145666665532 1 22333445568899
Q ss_pred eEEEcCChh
Q 041003 134 VVIVDDTEK 142 (282)
Q Consensus 134 vvivDd~~~ 142 (282)
+++|+|+..
T Consensus 185 ~i~vGD~~~ 193 (247)
T 3dv9_A 185 ALVIENAPL 193 (247)
T ss_dssp EEEEECSHH
T ss_pred eEEEeCCHH
Confidence 999999983
No 81
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=97.33 E-value=0.00064 Score=59.05 Aligned_cols=79 Identities=16% Similarity=0.105 Sum_probs=58.5
Q ss_pred EEecccHHHHHHHHhc-Cc--eEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC----------Cceeccccc
Q 041003 61 VKVRSYIRKFLKKASK-MY--DIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE----------KGKKSGDLV 127 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~-~y--ei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~----------~~~KdL~~l 127 (282)
+...||+.++|+.+.+ .+ .++|.|++.+.++..+++.+.-.. +| +.+++.+.... .+.+=++.+
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~-~f--d~v~~~~~~~~~~~~~Kp~~~~~~~~~~~l 217 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIAD-LF--DGLTYCDYSRTDTLVCKPHVKAFEKAMKES 217 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTT-SC--SEEECCCCSSCSSCCCTTSHHHHHHHHHHH
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCccc-cc--ceEEEeccCCCcccCCCcCHHHHHHHHHHc
Confidence 5678999999999976 58 999999999999999999887654 56 55665544321 112233345
Q ss_pred cccC-CceEEEcCChh
Q 041003 128 LRQE-WGVVIVDDTEK 142 (282)
Q Consensus 128 ~~~~-~~vvivDd~~~ 142 (282)
+-++ +++++|+|+..
T Consensus 218 gi~~~~~~i~vGD~~~ 233 (282)
T 3nuq_A 218 GLARYENAYFIDDSGK 233 (282)
T ss_dssp TCCCGGGEEEEESCHH
T ss_pred CCCCcccEEEEcCCHH
Confidence 5576 99999999983
No 82
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=97.27 E-value=6.6e-05 Score=67.77 Aligned_cols=80 Identities=5% Similarity=0.036 Sum_probs=55.4
Q ss_pred EEecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccC---------CCC------Cceecc
Q 041003 61 VKVRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITRED---------FKE------KGKKSG 124 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~---------~~~------~~~KdL 124 (282)
+..+||+.++|+.+.+. +.++|.|++...++..+++.+.-.. +| ...+...+. ... .+.+-+
T Consensus 178 ~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~-~f-~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~~ 255 (317)
T 4eze_A 178 MTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDY-AF-SNTVEIRDNVLTDNITLPIMNAANKKQTLVDLA 255 (317)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSE-EE-EECEEEETTEEEEEECSSCCCHHHHHHHHHHHH
T ss_pred CEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCe-EE-EEEEEeeCCeeeeeEecccCCCCCCHHHHHHHH
Confidence 46899999999999765 9999999999999999999987643 45 333222111 100 011122
Q ss_pred ccccccCCceEEEcCChh
Q 041003 125 DLVLRQEWGVVIVDDTEK 142 (282)
Q Consensus 125 ~~l~~~~~~vvivDd~~~ 142 (282)
+.++-+.+++++|+|++.
T Consensus 256 ~~lgv~~~~~i~VGDs~~ 273 (317)
T 4eze_A 256 ARLNIATENIIACGDGAN 273 (317)
T ss_dssp HHHTCCGGGEEEEECSGG
T ss_pred HHcCCCcceEEEEeCCHH
Confidence 334447789999999974
No 83
>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}
Probab=97.23 E-value=0.00092 Score=54.34 Aligned_cols=69 Identities=17% Similarity=0.263 Sum_probs=43.6
Q ss_pred EEecccHHHHHHHHhcCceEEEEcCCc---HHHH--HHHHhhhcCCCcccccccEEEccCCCCCceeccccccccCCceE
Q 041003 61 VKVRSYIRKFLKKASKMYDIYLCTTRI---RSYA--MMMAKLLNPKCEYHISSRLITREDFKEKGKKSGDLVLRQEWGVV 135 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~yei~i~T~~~---~~Ya--~~v~~~ldp~~~~f~~~rv~~r~~~~~~~~KdL~~l~~~~~~vv 135 (282)
+...||+.++|+.+.+.+.+.|-|++. +... ...++..-+...+| +.+++.++. ++ +.++
T Consensus 68 ~~~~pg~~e~L~~L~~~~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~--~~i~~~~~~---------~l----~~~l 132 (180)
T 3bwv_A 68 LDVMPHAQEVVKQLNEHYDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQ--HFVFCGRKN---------II----LADY 132 (180)
T ss_dssp CCBCTTHHHHHHHHTTTSEEEEEECC--CCSHHHHHHHHHHHHCTTSCGG--GEEECSCGG---------GB----CCSE
T ss_pred CCCCcCHHHHHHHHHhcCCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcc--cEEEeCCcC---------ee----cccE
Confidence 567899999999998889999999983 2232 33333321221233 555654431 12 6689
Q ss_pred EEcCChhhh
Q 041003 136 IVDDTEKVW 144 (282)
Q Consensus 136 ivDd~~~~~ 144 (282)
+|||++..-
T Consensus 133 ~ieDs~~~i 141 (180)
T 3bwv_A 133 LIDDNPKQL 141 (180)
T ss_dssp EEESCHHHH
T ss_pred EecCCcchH
Confidence 999998643
No 84
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=97.21 E-value=0.00044 Score=58.20 Aligned_cols=102 Identities=15% Similarity=0.057 Sum_probs=65.8
Q ss_pred CCeeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHhc-CceEEEEcCCcH
Q 041003 10 KKLHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKASK-MYDIYLCTTRIR 88 (282)
Q Consensus 10 ~kl~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~~-~yei~i~T~~~~ 88 (282)
+...+++|+||||+......... ......||+.++|+.+.+ -+.++|.|++..
T Consensus 30 ~~k~i~~D~DGtl~~~~~y~~~~--------------------------~~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~ 83 (218)
T 2o2x_A 30 HLPALFLDRDGTINVDTDYPSDP--------------------------AEIVLRPQMLPAIATANRAGIPVVVVTNQSG 83 (218)
T ss_dssp SCCCEEECSBTTTBCCCSCTTCG--------------------------GGCCBCGGGHHHHHHHHHHTCCEEEEEECHH
T ss_pred cCCEEEEeCCCCcCCCCcccCCc--------------------------ccCeECcCHHHHHHHHHHCCCEEEEEcCcCC
Confidence 45578999999999763211000 012467999999999975 599999999998
Q ss_pred ---------------HHHHHHHhhhcCCCcccccccEEEc-----------cCCC--CC----ceeccccccccCCceEE
Q 041003 89 ---------------SYAMMMAKLLNPKCEYHISSRLITR-----------EDFK--EK----GKKSGDLVLRQEWGVVI 136 (282)
Q Consensus 89 ---------------~Ya~~v~~~ldp~~~~f~~~rv~~r-----------~~~~--~~----~~KdL~~l~~~~~~vvi 136 (282)
.++..+++.+.-. | ..-+.+. +++. ++ +.+-+++++-+.+++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~l~~~gl~---~-~~~~~~~~~~~g~~~~~~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~ 159 (218)
T 2o2x_A 84 IARGYFGWSAFAAVNGRVLELLREEGVF---V-DMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLI 159 (218)
T ss_dssp HHTTSCCHHHHHHHHHHHHHHHHHTTCC---C-SEEEEECCCTTCCSTTCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEE
T ss_pred CCcccccHHHHHHHHHHHHHHHHHcCCc---e-eeEEEeecCCCCceeecccCCccCCCCHHHHHHHHHHcCCCHHHEEE
Confidence 7888888776532 3 1111222 2222 11 12223344557889999
Q ss_pred EcCCh
Q 041003 137 VDDTE 141 (282)
Q Consensus 137 vDd~~ 141 (282)
|.|+.
T Consensus 160 VGD~~ 164 (218)
T 2o2x_A 160 VGDKL 164 (218)
T ss_dssp EESSH
T ss_pred EeCCH
Confidence 99997
No 85
>4gns_A Chitin biosynthesis protein CHS5; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=97.08 E-value=0.0016 Score=53.20 Aligned_cols=95 Identities=14% Similarity=0.032 Sum_probs=67.5
Q ss_pred cccccchhheeecceeEEeeccCCCCccchhHHHHHHHHhCCeE-ecccCCCccEEEEcCC--CCCcHHHHHHHHCCCce
Q 041003 182 RCFLGKIQRQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAAC-TDVYNLSVAQVVSVSS--RLGIKGHRLAEQHNKFL 258 (282)
Q Consensus 182 r~iL~~~r~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v-~~~~~~~vTHlV~~~~--~~~t~K~~~A~~~gi~I 258 (282)
+-|++..+..-++|.++|+...-|..+.+.-.+.......||.- ...+.-.+||.||..- +...+..-.|+-++|+|
T Consensus 151 kvilrthkmtdmsgitvclgpldplkeisdlqisqclshigarplqrhvaidtthfvcndldneesneelirakhnnipi 230 (290)
T 4gns_A 151 KVILRTHKMTDMSGITVCLGPLDPLKEISDLQISQCLSHIGARPLQRHVAIDTTHFVCNDLDNEESNEELIRAKHNNIPI 230 (290)
T ss_dssp EEEEECCCTTCCTTCCEEECCCCGGGTCCHHHHHHHHHHTTCCCCBSSCCTTCCEEECSCCTTCTTCHHHHHHHHTTCCE
T ss_pred heeeeecccccccCceEEecCCChhhhhhhccHHHHHHHhCCchhhheeeeecceeeecCCCcccchHHHHhhhccCCCc
Confidence 44777777777899999996654543323344567778889865 4446668999999831 12345566677889999
Q ss_pred ecHHHHHHHHHhCCcCCC
Q 041003 259 VHPQWIYAAYYLWSRQVE 276 (282)
Q Consensus 259 V~~~WL~~c~~~~~r~~E 276 (282)
|.|+|+.+|--.++-+.-
T Consensus 231 vrpewvracevekrivgv 248 (290)
T 4gns_A 231 VRPEWVRACEVEKRIVGV 248 (290)
T ss_dssp ECTHHHHHHHHTTSCCCS
T ss_pred cCHHHHHHHhhhheeeee
Confidence 999999999887665543
No 86
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=97.06 E-value=0.00014 Score=62.63 Aligned_cols=76 Identities=12% Similarity=0.010 Sum_probs=54.5
Q ss_pred EecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC------CceeccccccccCCce
Q 041003 62 KVRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE------KGKKSGDLVLRQEWGV 134 (282)
Q Consensus 62 ~~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~------~~~KdL~~l~~~~~~v 134 (282)
...||+.++|+.+.+. +.+.+-|++ ..+..+++.++-.. +| +.+++.++... .+.+-+++++-+++++
T Consensus 116 ~~~p~~~~ll~~Lk~~g~~i~i~~~~--~~~~~~L~~~gl~~-~F--d~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~ 190 (250)
T 4gib_A 116 DILPGIESLLIDVKSNNIKIGLSSAS--KNAINVLNHLGISD-KF--DFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNC 190 (250)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSC--TTHHHHHHHHTCGG-GC--SEECCGGGCCSCTTSSHHHHHHHHHHTCCGGGE
T ss_pred ccchhHHHHHHHHHhccccccccccc--chhhhHhhhccccc-cc--ceeecccccCCCCCcHHHHHHHHHHhCCChHHe
Confidence 4679999999999754 666664443 45778888876554 67 66777776642 2345566667788999
Q ss_pred EEEcCChh
Q 041003 135 VIVDDTEK 142 (282)
Q Consensus 135 vivDd~~~ 142 (282)
++|+|++.
T Consensus 191 l~VGDs~~ 198 (250)
T 4gib_A 191 IGIEDASA 198 (250)
T ss_dssp EEEESSHH
T ss_pred EEECCCHH
Confidence 99999984
No 87
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=96.95 E-value=0.0011 Score=54.20 Aligned_cols=99 Identities=17% Similarity=0.062 Sum_probs=61.1
Q ss_pred eeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHhc-CceEEEEcCCcHHH
Q 041003 12 LHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKASK-MYDIYLCTTRIRSY 90 (282)
Q Consensus 12 l~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~~-~yei~i~T~~~~~Y 90 (282)
..+++|+||||+..... .. . . ...-.....++++ +|+.+.+ .+.++|.|++.+.+
T Consensus 13 k~vifD~DGTL~d~~~~--~~-~-------------~------~~~~~~~~~~~~~--~l~~L~~~g~~~~i~T~~~~~~ 68 (176)
T 3mmz_A 13 DAVVLDFDGTQTDDRVL--ID-S-------------D------GREFVSVHRGDGL--GIAALRKSGLTMLILSTEQNPV 68 (176)
T ss_dssp SEEEECCTTTTSCSCCE--EC-T-------------T------CCEEEEEEHHHHH--HHHHHHHTTCEEEEEESSCCHH
T ss_pred CEEEEeCCCCcCcCCEe--ec-C-------------C------ccHhHhcccccHH--HHHHHHHCCCeEEEEECcChHH
Confidence 47899999999983221 11 0 0 0001112344444 7888864 59999999999999
Q ss_pred HHHHHhhhcCCCcccccccEEEccCCCCC-ceeccccccccCCceEEEcCChh
Q 041003 91 AMMMAKLLNPKCEYHISSRLITREDFKEK-GKKSGDLVLRQEWGVVIVDDTEK 142 (282)
Q Consensus 91 a~~v~~~ldp~~~~f~~~rv~~r~~~~~~-~~KdL~~l~~~~~~vvivDd~~~ 142 (282)
+..+++.+.-. +| ... ..... ..+=++.++-+.+++++|.|+..
T Consensus 69 ~~~~~~~lgi~--~~-~~~-----~~k~~~l~~~~~~~~~~~~~~~~vGD~~n 113 (176)
T 3mmz_A 69 VAARARKLKIP--VL-HGI-----DRKDLALKQWCEEQGIAPERVLYVGNDVN 113 (176)
T ss_dssp HHHHHHHHTCC--EE-ESC-----SCHHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred HHHHHHHcCCe--eE-eCC-----CChHHHHHHHHHHcCCCHHHEEEEcCCHH
Confidence 99999998765 55 211 11001 11122334456788999999873
No 88
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=96.88 E-value=0.0018 Score=51.66 Aligned_cols=101 Identities=10% Similarity=-0.107 Sum_probs=62.5
Q ss_pred CeeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHhc-CceEEEEcCCcHH
Q 041003 11 KLHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKASK-MYDIYLCTTRIRS 89 (282)
Q Consensus 11 kl~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~~-~yei~i~T~~~~~ 89 (282)
-..+++|+||||+.+...-... ...-.-...++++ .|+.+.+ .+.++|.|++.+.
T Consensus 4 ik~vifD~DGTL~~~~~~~~~~----------------------~~~~~~~~~~~~~--~l~~l~~~g~~~~i~T~~~~~ 59 (164)
T 3e8m_A 4 IKLILTDIDGVWTDGGMFYDQT----------------------GNEWKKFNTSDSA--GIFWAHNKGIPVGILTGEKTE 59 (164)
T ss_dssp CCEEEECSTTTTSSSEEEECSS----------------------SCEEEEEEGGGHH--HHHHHHHTTCCEEEECSSCCH
T ss_pred ceEEEEcCCCceEcCcEEEcCC----------------------CcEEEEecCChHH--HHHHHHHCCCEEEEEeCCChH
Confidence 3478999999999875321000 0000112344443 7888865 4999999999999
Q ss_pred HHHHHHhhhcCCCcccccccEEEccCCCC-CceeccccccccCCceEEEcCChh
Q 041003 90 YAMMMAKLLNPKCEYHISSRLITREDFKE-KGKKSGDLVLRQEWGVVIVDDTEK 142 (282)
Q Consensus 90 Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~-~~~KdL~~l~~~~~~vvivDd~~~ 142 (282)
++..+++.+.-.. +| ... .... .+.+=++.++-+++.+++|.|+..
T Consensus 60 ~~~~~~~~~gl~~-~~-~~~-----kpk~~~~~~~~~~~~~~~~~~~~vGD~~~ 106 (164)
T 3e8m_A 60 IVRRRAEKLKVDY-LF-QGV-----VDKLSAAEELCNELGINLEQVAYIGDDLN 106 (164)
T ss_dssp HHHHHHHHTTCSE-EE-CSC-----SCHHHHHHHHHHHHTCCGGGEEEECCSGG
T ss_pred HHHHHHHHcCCCE-ee-ccc-----CChHHHHHHHHHHcCCCHHHEEEECCCHH
Confidence 9999999886543 34 111 0000 111223344457889999999984
No 89
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=96.84 E-value=0.00046 Score=64.21 Aligned_cols=80 Identities=14% Similarity=0.076 Sum_probs=54.7
Q ss_pred EEecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCCCcccccccE------EEc----cCCCC-----Cceecc
Q 041003 61 VKVRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRL------ITR----EDFKE-----KGKKSG 124 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv------~~r----~~~~~-----~~~KdL 124 (282)
+..+||+.++|+.+.+. +.++|.|++...++..+++.++-.. +| .+.+ ++. +.+.. .+.+=+
T Consensus 255 ~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~-~~-~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~ 332 (415)
T 3p96_A 255 LELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDY-VA-ANELEIVDGTLTGRVVGPIIDRAGKATALREFA 332 (415)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSE-EE-EECEEEETTEEEEEECSSCCCHHHHHHHHHHHH
T ss_pred CccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccc-ee-eeeEEEeCCEEEeeEccCCCCCcchHHHHHHHH
Confidence 47899999999999865 9999999999999999999987653 34 2221 111 11111 011122
Q ss_pred ccccccCCceEEEcCChh
Q 041003 125 DLVLRQEWGVVIVDDTEK 142 (282)
Q Consensus 125 ~~l~~~~~~vvivDd~~~ 142 (282)
+.++-+++++++|+|+..
T Consensus 333 ~~~gi~~~~~i~vGD~~~ 350 (415)
T 3p96_A 333 QRAGVPMAQTVAVGDGAN 350 (415)
T ss_dssp HHHTCCGGGEEEEECSGG
T ss_pred HHcCcChhhEEEEECCHH
Confidence 233447789999999983
No 90
>3oq0_A DBF4, protein DNA52; DDK, BRCT, RAD53, replication checkpoint, FHA domain, regula subunit of DDK, CDC7, phosphorylation, nuclear; 2.70A {Saccharomyces cerevisiae}
Probab=96.74 E-value=0.0054 Score=48.85 Aligned_cols=79 Identities=16% Similarity=0.048 Sum_probs=55.3
Q ss_pred eee-cceeEEeeccCCCCc---------cchhHHHHHHHHhCCeEecccCCCccEEEEcCCC------CCcHHHHHHHHC
Q 041003 191 QIL-VRCTLFFSRDVDDKE---------FEFPLLKWRAGELGAACTDVYNLSVAQVVSVSSR------LGIKGHRLAEQH 254 (282)
Q Consensus 191 ~vl-~G~~i~fsg~~~~~~---------~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~------~~t~K~~~A~~~ 254 (282)
.|+ +..+|+|-+.-.... -.+..+++....+||++.+-++.+|||||+.+.. +.++-...|.++
T Consensus 19 kIM~r~s~iYFdt~~~~~~~~~~~~~l~k~~~llkk~f~~LGa~I~~FFd~~VTiIITrR~~~~~~~yp~~DIL~rAr~~ 98 (151)
T 3oq0_A 19 SHMKRDSRIYFDITDDVEMNTYNKSKMDKRRDLLKRGFLTLGAQITQFFDTTVTIVITRRSVENIYLLKDTDILSRAKKN 98 (151)
T ss_dssp --CCCCCEEEECCCCSSCCCHHHHHHHHHHHHHHHHHHHHHTCEEESSCCTTCCEEEESSCGGGGGGSCTTSHHHHHHHT
T ss_pred HHhccCCEEEEeCCCcchhhHHHHHHHHHHHHHHHHHHHHcCCEEeeecCCceEEEEeCCcCcccccCCcchHHHHHHHc
Confidence 466 778999976532211 0224456777899999999999999999998311 344556789999
Q ss_pred CCceecHHHHHHHHH
Q 041003 255 NKFLVHPQWIYAAYY 269 (282)
Q Consensus 255 gi~IV~~~WL~~c~~ 269 (282)
|++|-+.+=+.-=+.
T Consensus 99 ~mKIWs~EKl~RfL~ 113 (151)
T 3oq0_A 99 YMKVWSYEKAARFLK 113 (151)
T ss_dssp TCEEEEHHHHHHHHH
T ss_pred CCeeecHHHHHHHHH
Confidence 999988877764444
No 91
>2l42_A DNA-binding protein RAP1; BRCT domain, protein binding; NMR {Saccharomyces cerevisiae}
Probab=96.73 E-value=0.001 Score=49.09 Aligned_cols=82 Identities=17% Similarity=0.138 Sum_probs=62.9
Q ss_pred heeecceeEEeeccCCCCc--cchhHHHHHHHHhCCeEecccCCCc--cEEEEcCCCCCcHHHHHHHHCCCceecHHHHH
Q 041003 190 RQILVRCTLFFSRDVDDKE--FEFPLLKWRAGELGAACTDVYNLSV--AQVVSVSSRLGIKGHRLAEQHNKFLVHPQWIY 265 (282)
Q Consensus 190 ~~vl~G~~i~fsg~~~~~~--~~~~~l~~~~~~~Ga~v~~~~~~~v--THlV~~~~~~~t~K~~~A~~~gi~IV~~~WL~ 265 (282)
..+|.|..+++..-..... -..+.|.+++...||+|...+..+. .+.|++ ..++. +++.|+|..|.
T Consensus 9 ~~vF~g~~Fyin~d~~a~ds~~d~d~L~~lI~~nGG~Vl~~lP~~s~~~~yVVS--pyN~t--------~LpTVtpTYI~ 78 (106)
T 2l42_A 9 GPPLSNMKFYLNRDADAHDSLNDIDQLARLIRANGGEVLDSKPRESKENVFIVS--PYNHT--------NLPTVTPTYIK 78 (106)
T ss_dssp SCSSCCCCBEECCSSSCSSCSSTHHHHHHHHHTTTSCCCEECCCCCSSCCCCBC--TTCCC--------SSSBCCTTHHH
T ss_pred CccccCcEEEEcCCCccchhhhHHHHHHHHHHhcCcEEhhhCcccccCCeEEEe--CCCCC--------CCccccHHHHH
Confidence 4579999999976422211 2357899999999999998887544 456665 32222 78999999999
Q ss_pred HHHHhCCcCCCCCCCC
Q 041003 266 AAYYLWSRQVEKDYFP 281 (282)
Q Consensus 266 ~c~~~~~r~~E~~y~~ 281 (282)
+|+...+.++-.+|++
T Consensus 79 aC~~~nTLLnv~~YLv 94 (106)
T 2l42_A 79 ACCQSNSLLNMENYLV 94 (106)
T ss_dssp HHHHSTTSCGGGGCCB
T ss_pred HHHhcCceeccccccc
Confidence 9999999999999975
No 92
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=96.71 E-value=0.0091 Score=51.13 Aligned_cols=41 Identities=20% Similarity=0.098 Sum_probs=36.7
Q ss_pred EecccHHHHHHHHhc-CceEEEEcCCcHHHHHHHHhhhcCCC
Q 041003 62 KVRSYIRKFLKKASK-MYDIYLCTTRIRSYAMMMAKLLNPKC 102 (282)
Q Consensus 62 ~~RP~l~~FL~~~~~-~yei~i~T~~~~~Ya~~v~~~ldp~~ 102 (282)
..+||+.++|+.+.+ .+.+.|.|++.+.++..+++.+.-..
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~ 185 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDD 185 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChh
Confidence 789999999999976 59999999999999999999986543
No 93
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=96.67 E-value=0.00014 Score=59.17 Aligned_cols=76 Identities=12% Similarity=0.107 Sum_probs=51.4
Q ss_pred EEecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCC------C-CCceeccccccccCC
Q 041003 61 VKVRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDF------K-EKGKKSGDLVLRQEW 132 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~------~-~~~~KdL~~l~~~~~ 132 (282)
+..+||+.++|+.+.+. +.++|.|++.+.++..+ +.+.-... | ..+.+.+.. . .....-+..+ +.+
T Consensus 78 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~k~~~l~~l--~~~ 151 (201)
T 4ap9_A 78 VNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-A--NRAIFEDGKFQGIRLRFRDKGEFLKRF--RDG 151 (201)
T ss_dssp CCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-E--EEEEEETTEEEEEECCSSCHHHHHGGG--TTS
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-e--eeEEeeCCceECCcCCccCHHHHHHhc--CcC
Confidence 46899999999999865 99999999999999888 77764432 3 332222211 1 0111233334 778
Q ss_pred ceEEEcCChh
Q 041003 133 GVVIVDDTEK 142 (282)
Q Consensus 133 ~vvivDd~~~ 142 (282)
.++.|.|++.
T Consensus 152 ~~i~iGD~~~ 161 (201)
T 4ap9_A 152 FILAMGDGYA 161 (201)
T ss_dssp CEEEEECTTC
T ss_pred cEEEEeCCHH
Confidence 8999999873
No 94
>3l41_A BRCT-containing protein 1; BRC1, BRCT domain, tandem BRCT repeat, phosphoserine binding domain, DNA repair, cell division, mitosis; HET: SEP; 1.45A {Schizosaccharomyces pombe} PDB: 3l40_A*
Probab=96.63 E-value=0.0035 Score=53.62 Aligned_cols=90 Identities=12% Similarity=0.180 Sum_probs=57.9
Q ss_pred hheeecceeEEeeccCCCCccchhHHHHHHHHhCCeEecc--cC--------CCccEEEEcCCCCCcH---HHH-HHH-H
Q 041003 189 QRQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACTDV--YN--------LSVAQVVSVSSRLGIK---GHR-LAE-Q 253 (282)
Q Consensus 189 r~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~--~~--------~~vTHlV~~~~~~~t~---K~~-~A~-~ 253 (282)
+..+|.|+.+++++.+.. .+....+.++++..||++... +. +.-.+||+. +.... +.. .+. .
T Consensus 110 ~~~LF~G~~f~it~~~~~-~p~~~~l~~iI~~~GG~v~~~p~~~~~~~~~~~~~~~~vis~--~~d~~~~~~f~~~~~~~ 186 (220)
T 3l41_A 110 GPSLLEDYVVYLTSKTVA-PENVPAVISIVKSNGGVCSTLNVYNKRLARHLEDGNVVLITC--NEDSHIWTNFLDNASQN 186 (220)
T ss_dssp CSCTTTTSEEEEETTSSC-GGGHHHHHHHHHHTTCEEEEECSCCHHHHHHHHHCCEEEEEC--GGGHHHHTTTHHHHTTC
T ss_pred CchhhhheeEEEeccccC-CCCCceEEEEEecCCcEechhhHHHHHHHHhcccCCEEEEEe--CCcchHHHHhhcccccc
Confidence 478999999999986510 134788999999999999871 11 112466665 21111 111 121 2
Q ss_pred CCCceecHHHHHHHHHhCCcCCCCCCCC
Q 041003 254 HNKFLVHPQWIYAAYYLWSRQVEKDYFP 281 (282)
Q Consensus 254 ~gi~IV~~~WL~~c~~~~~r~~E~~y~~ 281 (282)
.++.||+++|+..++-+.+--=|+.+.|
T Consensus 187 ~~~~i~~~e~ll~~il~q~l~~~~~~~~ 214 (220)
T 3l41_A 187 KTIFLQNYDWLIKTVLRQEIDVNDRIAD 214 (220)
T ss_dssp TTEEEEEHHHHHHHHHHTCCCTTCCBCG
T ss_pred ceEEEechhHHHHHHHHHHcCcchHHHH
Confidence 3567999999999998776655555543
No 95
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=96.63 E-value=0.003 Score=55.22 Aligned_cols=120 Identities=17% Similarity=0.097 Sum_probs=62.5
Q ss_pred cCCCeeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCccee-ecceeEEEEecccHHHHHHHHhc-CceEEEEcC
Q 041003 8 RQKKLHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFK-MASELFLVKVRSYIRKFLKKASK-MYDIYLCTT 85 (282)
Q Consensus 8 ~~~kl~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~v~~RP~l~~FL~~~~~-~yei~i~T~ 85 (282)
..++..+|+||||||+.+...- . . ... ......+ .+. +- ..--....||+.++|+.+.+ -+.++|.|+
T Consensus 56 ~~~~kavifDlDGTLld~~~~~--~---~-~~~-~~~~~~~--~~~~~~-~~~~~~~~pg~~e~L~~L~~~Gi~i~iaTn 125 (258)
T 2i33_A 56 TEKKPAIVLDLDETVLDNSPHQ--A---M-SVK-TGKGYPY--KWDDWI-NKAEAEALPGSIDFLKYTESKGVDIYYISN 125 (258)
T ss_dssp CSSEEEEEECSBTTTEECHHHH--H---H-HHH-HSCCTTT--THHHHH-HHCCCEECTTHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCEEEEeCcccCcCCHHHH--H---H-HHh-cccchHH--HHHHHH-HcCCCCcCccHHHHHHHHHHCCCEEEEEcC
Confidence 4567799999999999985210 0 0 000 0000000 000 00 00013577999999999975 599999999
Q ss_pred Cc---HHHHHHHHhhhcCCC-cccccccEEEccCCCCCceecccccc--ccCCceEEEcCChh
Q 041003 86 RI---RSYAMMMAKLLNPKC-EYHISSRLITREDFKEKGKKSGDLVL--RQEWGVVIVDDTEK 142 (282)
Q Consensus 86 ~~---~~Ya~~v~~~ldp~~-~~f~~~rv~~r~~~~~~~~KdL~~l~--~~~~~vvivDd~~~ 142 (282)
.. +..+...++.+.-.. .+| . ++.+.+.. +.++..... .+...+++|.|+..
T Consensus 126 r~~~~~~~~~~~L~~~Gl~~v~~~--~-vi~~~~~~--~K~~~~~~~~~~~~~~~l~VGDs~~ 183 (258)
T 2i33_A 126 RKTNQLDATIKNLERVGAPQATKE--H-ILLQDPKE--KGKEKRRELVSQTHDIVLFFGDNLS 183 (258)
T ss_dssp EEGGGHHHHHHHHHHHTCSSCSTT--T-EEEECTTC--CSSHHHHHHHHHHEEEEEEEESSGG
T ss_pred CchhHHHHHHHHHHHcCCCcCCCc--e-EEECCCCC--CCcHHHHHHHHhCCCceEEeCCCHH
Confidence 88 445555555554331 123 3 33333321 112221111 23344778888864
No 96
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=96.58 E-value=0.0027 Score=52.86 Aligned_cols=45 Identities=18% Similarity=0.245 Sum_probs=38.7
Q ss_pred EEecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCCC-ccc
Q 041003 61 VKVRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPKC-EYH 105 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~~-~~f 105 (282)
+..+||+.++|+.+.+. +.++|.|++.+.++..+++.+.-.. .+|
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f 131 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVF 131 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEE
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEE
Confidence 56899999999999764 9999999999999999999987553 355
No 97
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=96.52 E-value=0.012 Score=46.75 Aligned_cols=96 Identities=10% Similarity=0.052 Sum_probs=58.6
Q ss_pred eeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHhc-CceEEEEcCCcHHH
Q 041003 12 LHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKASK-MYDIYLCTTRIRSY 90 (282)
Q Consensus 12 l~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~~-~yei~i~T~~~~~Y 90 (282)
..+++||||||+..... ..+ ..-|++.+.|+++.+ -+.++|+|.-....
T Consensus 4 k~i~~DlDGTL~~~~~~-~i~-----------------------------~~~~~~~~al~~l~~~G~~iii~TgR~~~~ 53 (142)
T 2obb_A 4 MTIAVDFDGTIVEHRYP-RIG-----------------------------EEIPFAVETLKLLQQEKHRLILWSVREGEL 53 (142)
T ss_dssp CEEEECCBTTTBCSCTT-SCC-----------------------------CBCTTHHHHHHHHHHTTCEEEECCSCCHHH
T ss_pred eEEEEECcCCCCCCCCc-ccc-----------------------------ccCHHHHHHHHHHHHCCCEEEEEeCCCccc
Confidence 46899999999985321 111 134789999999965 59999999987666
Q ss_pred HHHHHhhhcCCCcccccccEEEccCCCCCceeccccccccCCceEEEcCChh
Q 041003 91 AMMMAKLLNPKCEYHISSRLITREDFKEKGKKSGDLVLRQEWGVVIVDDTEK 142 (282)
Q Consensus 91 a~~v~~~ldp~~~~f~~~rv~~r~~~~~~~~KdL~~l~~~~~~vvivDd~~~ 142 (282)
...+.+.++..+.-+ . .++-+... ..+-.....+.+.-.++|||+..
T Consensus 54 ~~~~~~~l~~~gi~~--~-~I~~n~P~--~~~~~~~~~rK~~~~~fIDDR~~ 100 (142)
T 2obb_A 54 LDEAIEWCRARGLEF--Y-AANKDYPE--EERDHQGFSRKLKADLFIDDRNV 100 (142)
T ss_dssp HHHHHHHHHTTTCCC--S-EESSSSTT--C---CCSCCSSCCCSEEECTTST
T ss_pred HHHHHHHHHHcCCCe--E-EEEcCCch--hhhcchhhcCCcCCCEEeecccc
Confidence 677777777665322 2 22221110 01100112234566778999884
No 98
>3oq4_A DBF4, protein DNA52; DDK, BRCT, RAD53, replication checkpoint, FHA domain, regula subunit of DDK, CDC7, phosphorylation, nuclear; 2.40A {Saccharomyces cerevisiae}
Probab=96.52 E-value=0.0098 Score=46.46 Aligned_cols=73 Identities=18% Similarity=0.066 Sum_probs=53.0
Q ss_pred ceeEEeeccCCCCc---------cchhHHHHHHHHhCCeEecccCCCccEEEEcCCC------CCcHHHHHHHHCCCcee
Q 041003 195 RCTLFFSRDVDDKE---------FEFPLLKWRAGELGAACTDVYNLSVAQVVSVSSR------LGIKGHRLAEQHNKFLV 259 (282)
Q Consensus 195 G~~i~fsg~~~~~~---------~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~------~~t~K~~~A~~~gi~IV 259 (282)
..+|+|.+.-+... -....+.+-...+||++.+-++.+|||||+.+.. +.++-...|.++|++|-
T Consensus 7 ~s~iyfd~~~~~~~~~~~~~k~~k~~~llk~~f~~LGa~I~~FFd~~VTiiITrR~~~~~~~~p~~DIL~rAr~~~mKIW 86 (134)
T 3oq4_A 7 DSRIYFDITDDVEMNTYNKSKMDKRRDLLKRGFLTLGAQITQFFDTTVTIVITRRSVENIYLLKDTDILSRAKKNYMKVW 86 (134)
T ss_dssp TCEEEECCCCSSCCCHHHHHHHHHHHHHHHHHHHHTTCEEESSCCTTCCEEEESSCGGGGGGSCTTSHHHHHHHTTCEEE
T ss_pred cceEEecCCchHHHHHHHHHhhHHHHHHHHHHHHHcCCEEeeecCCceEEEEeCCcCcccccCCcchHHHHHHHcCCeee
Confidence 46788877643321 1235567778899999999999999999998311 33445678999999998
Q ss_pred cHHHHHHH
Q 041003 260 HPQWIYAA 267 (282)
Q Consensus 260 ~~~WL~~c 267 (282)
+.+=+.-=
T Consensus 87 s~EKl~Rf 94 (134)
T 3oq4_A 87 SYEKAARF 94 (134)
T ss_dssp EHHHHHHH
T ss_pred eHHHHHHH
Confidence 88766543
No 99
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=96.42 E-value=0.0053 Score=50.00 Aligned_cols=100 Identities=11% Similarity=-0.090 Sum_probs=65.6
Q ss_pred eeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHhc-CceEEEEcCCcHHH
Q 041003 12 LHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKASK-MYDIYLCTTRIRSY 90 (282)
Q Consensus 12 l~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~~-~yei~i~T~~~~~Y 90 (282)
..+++|+||||+.+... .. ......-.+.|...+.|+.+.+ -+.++|.|+....+
T Consensus 9 k~i~~DlDGTL~~~~~~--~~----------------------~~~~~~~~~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~ 64 (180)
T 1k1e_A 9 KFVITDVDGVLTDGQLH--YD----------------------ANGEAIKSFHVRDGLGIKMLMDADIQVAVLSGRDSPI 64 (180)
T ss_dssp CEEEEECTTTTSCSEEE--EE----------------------TTEEEEEEEEHHHHHHHHHHHHTTCEEEEEESCCCHH
T ss_pred eEEEEeCCCCcCCCCee--ec----------------------cCcceeeeeccchHHHHHHHHHCCCeEEEEeCCCcHH
Confidence 47899999999986431 11 0112334467788899999975 59999999999999
Q ss_pred HHHHHhhhcCCCcccccccEEEccCCCCCcee-ccccccccCCceEEEcCChh
Q 041003 91 AMMMAKLLNPKCEYHISSRLITREDFKEKGKK-SGDLVLRQEWGVVIVDDTEK 142 (282)
Q Consensus 91 a~~v~~~ldp~~~~f~~~rv~~r~~~~~~~~K-dL~~l~~~~~~vvivDd~~~ 142 (282)
+..+++.+.-.. +| .. .......++ =++.++-+++.+++|.|+..
T Consensus 65 ~~~~~~~lgl~~-~~-~~-----~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~ 110 (180)
T 1k1e_A 65 LRRRIADLGIKL-FF-LG-----KLEKETACFDLMKQAGVTAEQTAYIGDDSV 110 (180)
T ss_dssp HHHHHHHHTCCE-EE-ES-----CSCHHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred HHHHHHHcCCce-ee-cC-----CCCcHHHHHHHHHHcCCCHHHEEEECCCHH
Confidence 999999987553 34 11 000001111 12233446788999999873
No 100
>3qbz_A DDK kinase regulatory subunit DBF4; FHA domain,RAD53, replication checkpoint, cell cycle; 2.69A {Saccharomyces cerevisiae}
Probab=96.35 E-value=0.0086 Score=48.06 Aligned_cols=73 Identities=19% Similarity=0.126 Sum_probs=51.4
Q ss_pred eeec-ceeEEeeccCCCCcc--ch-------hHHHHHHHHhCCeEecccCCCccEEEEcCCC------CCcHHHHHHHHC
Q 041003 191 QILV-RCTLFFSRDVDDKEF--EF-------PLLKWRAGELGAACTDVYNLSVAQVVSVSSR------LGIKGHRLAEQH 254 (282)
Q Consensus 191 ~vl~-G~~i~fsg~~~~~~~--~~-------~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~------~~t~K~~~A~~~ 254 (282)
.+|. +++|+|-+.-+.... .+ ..+.+.+..+||++.+-++.+|||||+...- +.++-...|.+.
T Consensus 57 kifk~~~vfYFDt~~~~~~~~~~k~kl~K~~~llkr~f~~LGA~I~~FFd~~VTiVIT~R~i~~~~~~~~~Dil~~A~~~ 136 (160)
T 3qbz_A 57 KIMKRDSRIYFDITDDVEMNTYNKSKMDKRRDLLKRGFLTLGAQITQFFDTTVTIVITRRSVENIYLLKDTDILSRAKKN 136 (160)
T ss_dssp HHHHHHCEEEECCCCSSCCCHHHHHHHHHHHHHHHHHHHTTTCEEESSCCTTCCEEEESSCSSCGGGSCTTSHHHHHHHT
T ss_pred HhCccCcEEEecCCChhhhhHHHHHHHHHHHHHHHHHHHHcCCEeeeeccCCeEEEEecCcCcccccCCchhHHHHHHHc
Confidence 5888 899999876432110 01 2244567799999999999999999998421 223456778888
Q ss_pred CCceecHHH
Q 041003 255 NKFLVHPQW 263 (282)
Q Consensus 255 gi~IV~~~W 263 (282)
+++|-+.+=
T Consensus 137 ~mKVW~yeK 145 (160)
T 3qbz_A 137 YMKVWSYEK 145 (160)
T ss_dssp TCEEEEHHH
T ss_pred CceecchHH
Confidence 998876653
No 101
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=96.30 E-value=0.0065 Score=49.89 Aligned_cols=102 Identities=17% Similarity=0.056 Sum_probs=61.0
Q ss_pred CCeeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHhcC-ceEEEEcCCcH
Q 041003 10 KKLHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKASKM-YDIYLCTTRIR 88 (282)
Q Consensus 10 ~kl~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~~~-yei~i~T~~~~ 88 (282)
+...+++|+||||+++... .. . + ....-.+..+++ .+|+.+.+. +.++|.|++..
T Consensus 25 ~ik~vifD~DGTL~~~~~~--~~-~-------------~------~~~~~~~~~~d~--~~l~~L~~~g~~v~ivT~~~~ 80 (188)
T 2r8e_A 25 NIRLLILDVDGVLSDGLIY--MG-N-------------N------GEELKAFNVRDG--YGIRCALTSDIEVAIITGRKA 80 (188)
T ss_dssp TCSEEEECCCCCCBCSEEE--EE-T-------------T------SCEEEEEEHHHH--HHHHHHHTTTCEEEEECSSCC
T ss_pred cCCEEEEeCCCCcCCCCEE--ec-C-------------C------CcEEEEeecccH--HHHHHHHHCCCeEEEEeCCCh
Confidence 4457899999999985421 01 0 0 000001122232 388888764 99999999999
Q ss_pred HHHHHHHhhhcCCCcccccccEEEccCCCCCcee-ccccccccCCceEEEcCChh
Q 041003 89 SYAMMMAKLLNPKCEYHISSRLITREDFKEKGKK-SGDLVLRQEWGVVIVDDTEK 142 (282)
Q Consensus 89 ~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~~~~K-dL~~l~~~~~~vvivDd~~~ 142 (282)
..+..+++.++-.. +| .. .......++ =++.++-+.+++++|+|+..
T Consensus 81 ~~~~~~l~~lgl~~-~~-~~-----~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~ 128 (188)
T 2r8e_A 81 KLVEDRCATLGITH-LY-QG-----QSNKLIAFSDLLEKLAIAPENVAYVGDDLI 128 (188)
T ss_dssp HHHHHHHHHHTCCE-EE-CS-----CSCSHHHHHHHHHHHTCCGGGEEEEESSGG
T ss_pred HHHHHHHHHcCCce-ee-cC-----CCCCHHHHHHHHHHcCCCHHHEEEECCCHH
Confidence 99999999886442 34 11 111101111 12333446789999999983
No 102
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=96.23 E-value=0.0057 Score=50.39 Aligned_cols=101 Identities=16% Similarity=-0.073 Sum_probs=62.7
Q ss_pred CeeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHhc-CceEEEEcCCcHH
Q 041003 11 KLHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKASK-MYDIYLCTTRIRS 89 (282)
Q Consensus 11 kl~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~~-~yei~i~T~~~~~ 89 (282)
-..+++|+||||+.+...- . .. ...-.....+++. +|+.+.+ .+.++|.|++.+.
T Consensus 19 ik~vifD~DGTL~d~~~~~--~-~~-------------------~~~~~~~~~~~~~--~l~~L~~~g~~~~i~T~~~~~ 74 (189)
T 3mn1_A 19 IKLAVFDVDGVLTDGRLYF--M-ED-------------------GSEIKTFNTLDGQ--GIKMLIASGVTTAIISGRKTA 74 (189)
T ss_dssp CCEEEECSTTTTSCSEEEE--E-TT-------------------SCEEEEEEHHHHH--HHHHHHHTTCEEEEECSSCCH
T ss_pred CCEEEEcCCCCcCCccEee--c-cC-------------------CcEeeeeccccHH--HHHHHHHCCCEEEEEECcChH
Confidence 3578999999999874321 1 00 0011123344444 8888875 5999999999999
Q ss_pred HHHHHHhhhcCCCcccccccEEEccCCCCCce-eccccccccCCceEEEcCChh
Q 041003 90 YAMMMAKLLNPKCEYHISSRLITREDFKEKGK-KSGDLVLRQEWGVVIVDDTEK 142 (282)
Q Consensus 90 Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~~~~-KdL~~l~~~~~~vvivDd~~~ 142 (282)
.+..+++.+.-.. +| .. + ..+...+ +=++.++-+.+.+++|.|+..
T Consensus 75 ~~~~~~~~lgl~~-~f-~~-~----~~K~~~~~~~~~~~g~~~~~~~~vGD~~n 121 (189)
T 3mn1_A 75 IVERRAKSLGIEH-LF-QG-R----EDKLVVLDKLLAELQLGYEQVAYLGDDLP 121 (189)
T ss_dssp HHHHHHHHHTCSE-EE-CS-C----SCHHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred HHHHHHHHcCCHH-Hh-cC-c----CChHHHHHHHHHHcCCChhHEEEECCCHH
Confidence 9999999987553 44 11 1 0000011 112233446788999999874
No 103
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=96.19 E-value=0.0041 Score=53.70 Aligned_cols=77 Identities=19% Similarity=0.143 Sum_probs=59.9
Q ss_pred EEecccHHHHHHHHhcCceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC------CceeccccccccCCce
Q 041003 61 VKVRSYIRKFLKKASKMYDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE------KGKKSGDLVLRQEWGV 134 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~------~~~KdL~~l~~~~~~v 134 (282)
+...||+.++|+.+.+.+.++|.|++.+.++..+++.++-.. +| +.+++.+++.. .+.+-+++++-+++++
T Consensus 120 ~~~~~g~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~-~f--~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~ 196 (260)
T 2gfh_A 120 MILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQS-YF--DAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDC 196 (260)
T ss_dssp CCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCGG-GC--SEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGE
T ss_pred CCCCcCHHHHHHHHHcCCcEEEEECcChHHHHHHHHhcCHHh-hh--heEEecCCCCCCCCCHHHHHHHHHHcCCChhhE
Confidence 457799999999998889999999999999999999987654 67 66677666532 1223344555678999
Q ss_pred EEEcCC
Q 041003 135 VIVDDT 140 (282)
Q Consensus 135 vivDd~ 140 (282)
++|+|+
T Consensus 197 ~~vGDs 202 (260)
T 2gfh_A 197 VMVGDT 202 (260)
T ss_dssp EEEESC
T ss_pred EEECCC
Confidence 999995
No 104
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=96.19 E-value=0.0085 Score=49.66 Aligned_cols=79 Identities=5% Similarity=-0.044 Sum_probs=60.9
Q ss_pred EEecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC------CceeccccccccCCc
Q 041003 61 VKVRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE------KGKKSGDLVLRQEWG 133 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~------~~~KdL~~l~~~~~~ 133 (282)
+...|++.++|+.+.+. +.++|.|++.+.++..+++.+.-.. +| +.+++.+++.. .+.+=++.++-++++
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f--~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 174 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSG-LF--DHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQ 174 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTT-TC--SEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGG
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHh-hc--CEEEEecccCCCCcCHHHHHHHHHHhCCCccc
Confidence 56789999999999876 9999999999999999998876554 56 66777776542 122333445567899
Q ss_pred eEEEcCChh
Q 041003 134 VVIVDDTEK 142 (282)
Q Consensus 134 vvivDd~~~ 142 (282)
+++|+|+..
T Consensus 175 ~~~vGD~~~ 183 (233)
T 3umb_A 175 ILFVSSNGW 183 (233)
T ss_dssp EEEEESCHH
T ss_pred EEEEeCCHH
Confidence 999999963
No 105
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=96.14 E-value=0.0069 Score=49.06 Aligned_cols=79 Identities=16% Similarity=0.183 Sum_probs=60.5
Q ss_pred EEecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC------CceeccccccccCCc
Q 041003 61 VKVRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE------KGKKSGDLVLRQEWG 133 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~------~~~KdL~~l~~~~~~ 133 (282)
+..+|++.++|+.+.+. +.++|.|++.+.++..+++.+.-.. +| +.+++.++... .+.+-++.++-++++
T Consensus 88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f--~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~ 164 (214)
T 3e58_A 88 ELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQG-FF--DIVLSGEEFKESKPNPEIYLTALKQLNVQASR 164 (214)
T ss_dssp HHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GC--SEEEEGGGCSSCTTSSHHHHHHHHHHTCCGGG
T ss_pred CCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHh-he--eeEeecccccCCCCChHHHHHHHHHcCCChHH
Confidence 36789999999999865 9999999999999999999886543 56 56777776542 112233445567899
Q ss_pred eEEEcCChh
Q 041003 134 VVIVDDTEK 142 (282)
Q Consensus 134 vvivDd~~~ 142 (282)
++.|+|++.
T Consensus 165 ~~~iGD~~~ 173 (214)
T 3e58_A 165 ALIIEDSEK 173 (214)
T ss_dssp EEEEECSHH
T ss_pred eEEEeccHh
Confidence 999999973
No 106
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=96.09 E-value=0.0012 Score=54.77 Aligned_cols=66 Identities=12% Similarity=-0.080 Sum_probs=43.7
Q ss_pred HHHHHhc-CceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC-CceeccccccccCCceEEEcCChh
Q 041003 70 FLKKASK-MYDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE-KGKKSGDLVLRQEWGVVIVDDTEK 142 (282)
Q Consensus 70 FL~~~~~-~yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~-~~~KdL~~l~~~~~~vvivDd~~~ 142 (282)
-|+.+.+ .+.++|.|++.+..+..+++.+.-.. +| .. + .... .+.+-++.++-+++.+++|.|+..
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~-~~-~~-~----kpk~~~~~~~~~~~~~~~~~~~~vGD~~~ 121 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH-YY-KG-Q----VDKRSAYQHLKKTLGLNDDEFAYIGDDLP 121 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE-EE-CS-C----SSCHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc-ce-eC-C----CChHHHHHHHHHHhCCCHHHEEEECCCHH
Confidence 3777765 59999999999999999999986543 34 11 1 0000 111222334557889999999983
No 107
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=96.08 E-value=0.0071 Score=50.49 Aligned_cols=80 Identities=16% Similarity=0.233 Sum_probs=59.6
Q ss_pred EEEecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC--C----ceeccccccccCC
Q 041003 60 LVKVRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE--K----GKKSGDLVLRQEW 132 (282)
Q Consensus 60 ~v~~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~--~----~~KdL~~l~~~~~ 132 (282)
.+...||+.++|+.+.+. +.++|.|++.+.++..+++.+.-.. +| +.+++.+++.. + +.+=++.++-+.+
T Consensus 81 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~-~f--~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~ 157 (222)
T 2nyv_A 81 YTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSG-YF--DLIVGGDTFGEKKPSPTPVLKTLEILGEEPE 157 (222)
T ss_dssp SCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GC--SEEECTTSSCTTCCTTHHHHHHHHHHTCCGG
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHH-Hh--eEEEecCcCCCCCCChHHHHHHHHHhCCCch
Confidence 367899999999999765 9999999999999999999886433 56 56676665432 1 1222334455788
Q ss_pred ceEEEcCChh
Q 041003 133 GVVIVDDTEK 142 (282)
Q Consensus 133 ~vvivDd~~~ 142 (282)
++++|+|+..
T Consensus 158 ~~~~vGD~~~ 167 (222)
T 2nyv_A 158 KALIVGDTDA 167 (222)
T ss_dssp GEEEEESSHH
T ss_pred hEEEECCCHH
Confidence 9999999963
No 108
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=96.04 E-value=0.0066 Score=50.21 Aligned_cols=79 Identities=20% Similarity=0.153 Sum_probs=60.1
Q ss_pred EEecccHHHHHHHHhcCceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC----CceeccccccccCCceEE
Q 041003 61 VKVRSYIRKFLKKASKMYDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE----KGKKSGDLVLRQEWGVVI 136 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~----~~~KdL~~l~~~~~~vvi 136 (282)
+...||+.++|+.+.+.|.+.|.|++.+.++..+++.++-.. +| +.+++.+...+ .+.+=+++++-+++++++
T Consensus 83 ~~~~~g~~~~l~~L~~~~~l~i~T~~~~~~~~~~l~~~gl~~-~f--~~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~ 159 (210)
T 2ah5_A 83 AQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHH-FF--DGIYGSSPEAPHKADVIHQALQTHQLAPEQAII 159 (210)
T ss_dssp CEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHHTTCGG-GC--SEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEE
T ss_pred CCCCCCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCchh-he--eeeecCCCCCCCChHHHHHHHHHcCCCcccEEE
Confidence 567899999999998789999999999999999999886543 57 55666651111 233344556668899999
Q ss_pred EcCChh
Q 041003 137 VDDTEK 142 (282)
Q Consensus 137 vDd~~~ 142 (282)
|+|++.
T Consensus 160 vgDs~~ 165 (210)
T 2ah5_A 160 IGDTKF 165 (210)
T ss_dssp EESSHH
T ss_pred ECCCHH
Confidence 999973
No 109
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=96.02 E-value=0.0075 Score=50.87 Aligned_cols=78 Identities=9% Similarity=0.008 Sum_probs=60.6
Q ss_pred EEecccHHHHHHHHhc-CceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC------CceeccccccccCCc
Q 041003 61 VKVRSYIRKFLKKASK-MYDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE------KGKKSGDLVLRQEWG 133 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~-~yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~------~~~KdL~~l~~~~~~ 133 (282)
+...||+.++|+.+.+ .+.+.|.|++.+.++..+++.+... +| +.+++.+++.. .+.+=+++++-++++
T Consensus 109 ~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~--~f--~~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~ 184 (240)
T 2hi0_A 109 TGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG--SF--DFALGEKSGIRRKPAPDMTSECVKVLGVPRDK 184 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT--TC--SEEEEECTTSCCTTSSHHHHHHHHHHTCCGGG
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc--ce--eEEEecCCCCCCCCCHHHHHHHHHHcCCCHHH
Confidence 5678999999999975 5999999999999999999998754 57 66777766532 122334455667899
Q ss_pred eEEEcCChh
Q 041003 134 VVIVDDTEK 142 (282)
Q Consensus 134 vvivDd~~~ 142 (282)
+++|.|++.
T Consensus 185 ~~~vGDs~~ 193 (240)
T 2hi0_A 185 CVYIGDSEI 193 (240)
T ss_dssp EEEEESSHH
T ss_pred eEEEcCCHH
Confidence 999999973
No 110
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=95.98 E-value=0.0076 Score=49.32 Aligned_cols=79 Identities=9% Similarity=0.012 Sum_probs=59.1
Q ss_pred EEecccHHHHHHHHhcCceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC--C----ceeccccccccCCce
Q 041003 61 VKVRSYIRKFLKKASKMYDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE--K----GKKSGDLVLRQEWGV 134 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~--~----~~KdL~~l~~~~~~v 134 (282)
+...||+.++|+.+.+.+.++|.|++.+.++..+++.+.-.. +| +.+++.+++.. + +.+=++.++-+++++
T Consensus 82 ~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~~l~~-~f--~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 158 (209)
T 2hdo_A 82 IELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFMM-RM--AVTISADDTPKRKPDPLPLLTALEKVNVAPQNA 158 (209)
T ss_dssp CEECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTTSGGGG-GE--EEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGE
T ss_pred CCcCCCHHHHHHHHHhcCcEEEEeCCCHHHHHHHHHHcChHh-hc--cEEEecCcCCCCCCCcHHHHHHHHHcCCCcccE
Confidence 568999999999997659999999999999999998875433 56 55666665532 1 122334455578899
Q ss_pred EEEcCChh
Q 041003 135 VIVDDTEK 142 (282)
Q Consensus 135 vivDd~~~ 142 (282)
++|+|+..
T Consensus 159 i~vGD~~~ 166 (209)
T 2hdo_A 159 LFIGDSVS 166 (209)
T ss_dssp EEEESSHH
T ss_pred EEECCChh
Confidence 99999974
No 111
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=95.98 E-value=0.0089 Score=49.50 Aligned_cols=78 Identities=12% Similarity=0.142 Sum_probs=60.9
Q ss_pred EEecccHHHHHHHHhcCceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC------CceeccccccccCCce
Q 041003 61 VKVRSYIRKFLKKASKMYDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE------KGKKSGDLVLRQEWGV 134 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~------~~~KdL~~l~~~~~~v 134 (282)
....|++.++|+.+.+.+.++|.|++.+.++..+++.+.-.. +| +.+++.+++.. .+.+=++.++-+++++
T Consensus 106 ~~~~~~~~~~l~~l~~g~~~~i~sn~~~~~~~~~l~~~~l~~-~f--~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 182 (240)
T 3qnm_A 106 SGLMPHAKEVLEYLAPQYNLYILSNGFRELQSRKMRSAGVDR-YF--KKIILSEDLGVLKPRPEIFHFALSATQSELRES 182 (240)
T ss_dssp CCBSTTHHHHHHHHTTTSEEEEEECSCHHHHHHHHHHHTCGG-GC--SEEEEGGGTTCCTTSHHHHHHHHHHTTCCGGGE
T ss_pred CCcCccHHHHHHHHHcCCeEEEEeCCchHHHHHHHHHcChHh-hc--eeEEEeccCCCCCCCHHHHHHHHHHcCCCcccE
Confidence 567899999999999889999999999999999999886543 56 66777776542 1222344556688999
Q ss_pred EEEcCCh
Q 041003 135 VIVDDTE 141 (282)
Q Consensus 135 vivDd~~ 141 (282)
++|+|++
T Consensus 183 ~~iGD~~ 189 (240)
T 3qnm_A 183 LMIGDSW 189 (240)
T ss_dssp EEEESCT
T ss_pred EEECCCc
Confidence 9999995
No 112
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=95.86 E-value=0.011 Score=48.67 Aligned_cols=79 Identities=13% Similarity=0.023 Sum_probs=60.3
Q ss_pred EEecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC------CceeccccccccCCc
Q 041003 61 VKVRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE------KGKKSGDLVLRQEWG 133 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~------~~~KdL~~l~~~~~~ 133 (282)
....|++.++|+.+.+. +.++|.|++...++..+++.+.-.. +| +.+++.++... .+.+=++.++-++++
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f--~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~ 166 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDI-NK--INIVTRDDVSYGKPDPDLFLAAAKKIGAPIDE 166 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCT-TS--SCEECGGGSSCCTTSTHHHHHHHHHTTCCGGG
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhh-hh--heeeccccCCCCCCChHHHHHHHHHhCCCHHH
Confidence 57899999999999865 9999999999999999999876544 45 55666665432 122333445567899
Q ss_pred eEEEcCChh
Q 041003 134 VVIVDDTEK 142 (282)
Q Consensus 134 vvivDd~~~ 142 (282)
+++|+|+..
T Consensus 167 ~i~iGD~~~ 175 (233)
T 3s6j_A 167 CLVIGDAIW 175 (233)
T ss_dssp EEEEESSHH
T ss_pred EEEEeCCHH
Confidence 999999984
No 113
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=95.82 E-value=0.012 Score=48.71 Aligned_cols=78 Identities=9% Similarity=0.030 Sum_probs=61.0
Q ss_pred EEecccHHHHHHHHhcCceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC------Cceecccccc-ccCCc
Q 041003 61 VKVRSYIRKFLKKASKMYDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE------KGKKSGDLVL-RQEWG 133 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~------~~~KdL~~l~-~~~~~ 133 (282)
....||+.++|+.+.+.+.++|.|++.+.++..+++.++-.. +| +.+++.+++.. .+.+=++.++ -++++
T Consensus 102 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~-~f--~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~ 178 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQFDLYIVTNGVSHTQYKRLRDSGLFP-FF--KDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEH 178 (238)
T ss_dssp CCBCTTHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHTTCGG-GC--SEEEEGGGTTSCTTCHHHHHHHHHTSTTCCGGG
T ss_pred CCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcChHh-hh--heEEEecccCCCCCChHHHHHHHHHcCCCChhH
Confidence 567899999999998669999999999999999998875443 56 66777766542 1223445667 68899
Q ss_pred eEEEcCCh
Q 041003 134 VVIVDDTE 141 (282)
Q Consensus 134 vvivDd~~ 141 (282)
+++|+|+.
T Consensus 179 ~i~vGD~~ 186 (238)
T 3ed5_A 179 TLIIGDSL 186 (238)
T ss_dssp EEEEESCT
T ss_pred eEEECCCc
Confidence 99999996
No 114
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=95.76 E-value=0.011 Score=50.05 Aligned_cols=79 Identities=9% Similarity=0.057 Sum_probs=58.8
Q ss_pred EEecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC--C----ceeccccccccCCc
Q 041003 61 VKVRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE--K----GKKSGDLVLRQEWG 133 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~--~----~~KdL~~l~~~~~~ 133 (282)
+..+||+.++|+.+.+. +.++|.|++.+.++..+++.+.-.. +| +.+++.+++.. + +.+=++.++-+.++
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~-~f--~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~ 189 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDH-LF--SEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQ 189 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GC--SEEECTTTSSSCTTSSHHHHHHHHHHTCCGGG
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchh-eE--EEEEecccCCCCCcCHHHHHHHHHHhCcChhh
Confidence 46889999999999765 9999999999999999999886443 56 56676665532 1 11123344557889
Q ss_pred eEEEcCChh
Q 041003 134 VVIVDDTEK 142 (282)
Q Consensus 134 vvivDd~~~ 142 (282)
+++|+|+..
T Consensus 190 ~~~vGD~~~ 198 (243)
T 2hsz_A 190 ILFVGDSQN 198 (243)
T ss_dssp EEEEESSHH
T ss_pred EEEEcCCHH
Confidence 999999973
No 115
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=95.72 E-value=0.013 Score=49.47 Aligned_cols=101 Identities=16% Similarity=0.017 Sum_probs=62.5
Q ss_pred CeeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHhc-CceEEEEcCCcHH
Q 041003 11 KLHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKASK-MYDIYLCTTRIRS 89 (282)
Q Consensus 11 kl~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~~-~yei~i~T~~~~~ 89 (282)
-..+++||||||+.+... .. .. ...-.....++++ +|+.+.+ .+.+.|.|+..+.
T Consensus 49 ik~viFDlDGTL~Ds~~~--~~-~~-------------------~~~~~~~~~~d~~--~L~~L~~~G~~l~I~T~~~~~ 104 (211)
T 3ij5_A 49 IRLLICDVDGVMSDGLIY--MG-NQ-------------------GEELKAFNVRDGY--GIRCLITSDIDVAIITGRRAK 104 (211)
T ss_dssp CSEEEECCTTTTSSSEEE--EE-TT-------------------SCEEEEEEHHHHH--HHHHHHHTTCEEEEECSSCCH
T ss_pred CCEEEEeCCCCEECCHHH--Hh-hh-------------------hHHHHHhccchHH--HHHHHHHCCCEEEEEeCCCHH
Confidence 357899999999998532 11 00 0001122344555 8888865 5999999999999
Q ss_pred HHHHHHhhhcCCCcccccccEEEccCCCCCce-eccccccccCCceEEEcCChh
Q 041003 90 YAMMMAKLLNPKCEYHISSRLITREDFKEKGK-KSGDLVLRQEWGVVIVDDTEK 142 (282)
Q Consensus 90 Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~~~~-KdL~~l~~~~~~vvivDd~~~ 142 (282)
.|..+++.+.-.. +| .. + ......+ +=++.++-+.+.+++|-|+..
T Consensus 105 ~~~~~l~~lgi~~-~f-~~-~----k~K~~~l~~~~~~lg~~~~~~~~vGDs~n 151 (211)
T 3ij5_A 105 LLEDRANTLGITH-LY-QG-Q----SDKLVAYHELLATLQCQPEQVAYIGDDLI 151 (211)
T ss_dssp HHHHHHHHHTCCE-EE-CS-C----SSHHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred HHHHHHHHcCCch-hh-cc-c----CChHHHHHHHHHHcCcCcceEEEEcCCHH
Confidence 9999999987543 34 21 1 0000111 112234446788999988874
No 116
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=95.68 E-value=0.0084 Score=50.39 Aligned_cols=78 Identities=14% Similarity=0.032 Sum_probs=59.1
Q ss_pred EEecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC--C----ceeccccccccCCc
Q 041003 61 VKVRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE--K----GKKSGDLVLRQEWG 133 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~--~----~~KdL~~l~~~~~~ 133 (282)
+...||+.++|+.+.+. +.++|.|++.+.++..+++.+.-.. +| +.+++.++... + +.+=++.++-++++
T Consensus 93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f--~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~ 169 (241)
T 2hoq_A 93 LREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDD-FF--EHVIISDFEGVKKPHPKIFKKALKAFNVKPEE 169 (241)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGG-GC--SEEEEGGGGTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHh-hc--cEEEEeCCCCCCCCCHHHHHHHHHHcCCCccc
Confidence 45789999999999865 9999999999999999999886443 56 66677665532 1 12223445557889
Q ss_pred eEEEcCCh
Q 041003 134 VVIVDDTE 141 (282)
Q Consensus 134 vvivDd~~ 141 (282)
+++|+|++
T Consensus 170 ~i~iGD~~ 177 (241)
T 2hoq_A 170 ALMVGDRL 177 (241)
T ss_dssp EEEEESCT
T ss_pred EEEECCCc
Confidence 99999997
No 117
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=95.66 E-value=0.014 Score=51.20 Aligned_cols=115 Identities=17% Similarity=0.095 Sum_probs=66.7
Q ss_pred cCCCeeEEEeCCCceeeeeccC--------ccch-hhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHh-cC
Q 041003 8 RQKKLHLVLDLDQTLPHAVDID--------ILAS-KDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKAS-KM 77 (282)
Q Consensus 8 ~~~kl~LVLDLD~TLihs~~~~--------~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~-~~ 77 (282)
..+|+.+|||+||||+....-- ...+ .+..... . -....-||+.+||+.+. .-
T Consensus 55 ~~~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~--------------~---~~~~~~pG~~ell~~L~~~G 117 (262)
T 3ocu_A 55 KGKKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVD--------------A---RQSRAVPGAVEFNNYVNSHN 117 (262)
T ss_dssp TTCEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHH--------------H---TCCEECTTHHHHHHHHHHTT
T ss_pred CCCCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHH--------------c---CCCCCCccHHHHHHHHHHCC
Confidence 3567899999999999986310 0000 0000000 0 12568899999999996 45
Q ss_pred ceEEEEcCCcHH----HHHHHHhhhcCCCcccccccEEEccCCCCCceeccc--cccc-cCCceEEEcCChhhh
Q 041003 78 YDIYLCTTRIRS----YAMMMAKLLNPKCEYHISSRLITREDFKEKGKKSGD--LVLR-QEWGVVIVDDTEKVW 144 (282)
Q Consensus 78 yei~i~T~~~~~----Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~~~~KdL~--~l~~-~~~~vvivDd~~~~~ 144 (282)
++|+|-|+.... -+..-++.+.-.. ++ .+.++.|+.... |.-. .|.. +.+.++.|.|+..=+
T Consensus 118 ~ki~ivTgR~~~~~r~~T~~~L~~lGi~~-~~-~~~Lilr~~~~~---K~~~r~~l~~~Gy~iv~~vGD~~~Dl 186 (262)
T 3ocu_A 118 GKVFYVTNRKDSTEKSGTIDDMKRLGFNG-VE-ESAFYLKKDKSA---KAARFAEIEKQGYEIVLYVGDNLDDF 186 (262)
T ss_dssp EEEEEEEEEETTTTHHHHHHHHHHHTCSC-CS-GGGEEEESSCSC---CHHHHHHHHHTTEEEEEEEESSGGGG
T ss_pred CeEEEEeCCCccchHHHHHHHHHHcCcCc-cc-ccceeccCCCCC---hHHHHHHHHhcCCCEEEEECCChHHh
Confidence 999999987654 4445555553221 12 226676765432 2211 1211 245688898886433
No 118
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=95.52 E-value=0.013 Score=48.75 Aligned_cols=79 Identities=10% Similarity=0.059 Sum_probs=59.7
Q ss_pred EEecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC------CceeccccccccCCc
Q 041003 61 VKVRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE------KGKKSGDLVLRQEWG 133 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~------~~~KdL~~l~~~~~~ 133 (282)
....||+.++|+.+.+. +.++|.|++.+.++..+++.++-.. +| +.+++.+++.. .+.+=+++++-++++
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f--~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~ 179 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDT-RL--TVIAGDDSVERGKPHPDMALHVARGLGIPPER 179 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGG-TC--SEEECTTTSSSCTTSSHHHHHHHHHHTCCGGG
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchh-he--eeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHH
Confidence 35789999999999875 9999999999999999999886443 46 55666666532 122233445568899
Q ss_pred eEEEcCChh
Q 041003 134 VVIVDDTEK 142 (282)
Q Consensus 134 vvivDd~~~ 142 (282)
+++|+|+..
T Consensus 180 ~i~vGD~~~ 188 (237)
T 4ex6_A 180 CVVIGDGVP 188 (237)
T ss_dssp EEEEESSHH
T ss_pred eEEEcCCHH
Confidence 999999983
No 119
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=95.48 E-value=0.011 Score=48.36 Aligned_cols=80 Identities=9% Similarity=0.096 Sum_probs=57.4
Q ss_pred EEecccHHHHHHHHhcCceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCC-------C--CceeccccccccC
Q 041003 61 VKVRSYIRKFLKKASKMYDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFK-------E--KGKKSGDLVLRQE 131 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~-------~--~~~KdL~~l~~~~ 131 (282)
+..+||+.++|+.+.+.+.++|.|++.+.++..+++.++-.. +| .+.+.+.++.. . .+.+-++.++...
T Consensus 68 ~~~~~g~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~gl~~-~f-~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~~ 145 (206)
T 1rku_A 68 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPT-LL-CHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLY 145 (206)
T ss_dssp CCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTCCC-EE-EEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTT
T ss_pred cCCCccHHHHHHHHHhcCcEEEEECChHHHHHHHHHHcCCcc-ee-cceeEEcCCceEEeeecCCCchHHHHHHHHHhcC
Confidence 467999999999998669999999999999999999987654 45 34455433321 1 1112233444467
Q ss_pred CceEEEcCChh
Q 041003 132 WGVVIVDDTEK 142 (282)
Q Consensus 132 ~~vvivDd~~~ 142 (282)
+++++|+|++.
T Consensus 146 ~~~~~iGD~~~ 156 (206)
T 1rku_A 146 YRVIAAGDSYN 156 (206)
T ss_dssp CEEEEEECSST
T ss_pred CEEEEEeCChh
Confidence 78999999873
No 120
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=95.39 E-value=0.055 Score=47.32 Aligned_cols=113 Identities=19% Similarity=0.101 Sum_probs=65.4
Q ss_pred CCeeEEEeCCCceeeeeccC--------ccch-hhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHhc-Cce
Q 041003 10 KKLHLVLDLDQTLPHAVDID--------ILAS-KDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKASK-MYD 79 (282)
Q Consensus 10 ~kl~LVLDLD~TLihs~~~~--------~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~~-~ye 79 (282)
+|+.+|||+||||+..+.-- ...+ .+.... ..+ ....-||+.+||+.+.+ -++
T Consensus 57 ~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv--------------~~g---~~~~~pg~~ell~~L~~~G~~ 119 (260)
T 3pct_A 57 KKKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWV--------------DAR---QSAAIPGAVEFSNYVNANGGT 119 (260)
T ss_dssp -CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHH--------------HTT---CCEECTTHHHHHHHHHHTTCE
T ss_pred CCCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHH--------------HcC---CCCCCccHHHHHHHHHHCCCe
Confidence 45699999999999986320 0000 000000 011 25688999999999974 599
Q ss_pred EEEEcCCcHH----HHHHHHhhhcCCCcccccccEEEccCCCCCceecc--ccccc-cCCceEEEcCChhhh
Q 041003 80 IYLCTTRIRS----YAMMMAKLLNPKCEYHISSRLITREDFKEKGKKSG--DLVLR-QEWGVVIVDDTEKVW 144 (282)
Q Consensus 80 i~i~T~~~~~----Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~~~~KdL--~~l~~-~~~~vvivDd~~~~~ 144 (282)
|+|-|+.... -+..-++.+.-.. ++ ...++-|..... |.- ..|.. +.+.++.|.|+..=+
T Consensus 120 i~ivTgR~~~~~r~~T~~~L~~lGi~~-~~-~~~Lilr~~~~~---K~~~r~~L~~~gy~iv~~iGD~~~Dl 186 (260)
T 3pct_A 120 MFFVSNRRDDVEKAGTVDDMKRLGFTG-VN-DKTLLLKKDKSN---KSVRFKQVEDMGYDIVLFVGDNLNDF 186 (260)
T ss_dssp EEEEEEEETTTSHHHHHHHHHHHTCCC-CS-TTTEEEESSCSS---SHHHHHHHHTTTCEEEEEEESSGGGG
T ss_pred EEEEeCCCccccHHHHHHHHHHcCcCc-cc-cceeEecCCCCC---hHHHHHHHHhcCCCEEEEECCChHHc
Confidence 9999987654 5555555554322 12 225666654322 211 11222 456688898886433
No 121
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=95.28 E-value=0.017 Score=50.02 Aligned_cols=79 Identities=8% Similarity=0.044 Sum_probs=58.6
Q ss_pred EEecccHHHHHHHHh-cCceEEEEcCCcHHHHHHHHhhhcC--CCcccccccEEEccCCCC-----CceeccccccccCC
Q 041003 61 VKVRSYIRKFLKKAS-KMYDIYLCTTRIRSYAMMMAKLLNP--KCEYHISSRLITREDFKE-----KGKKSGDLVLRQEW 132 (282)
Q Consensus 61 v~~RP~l~~FL~~~~-~~yei~i~T~~~~~Ya~~v~~~ldp--~~~~f~~~rv~~r~~~~~-----~~~KdL~~l~~~~~ 132 (282)
+...||+.++|+.+. +.+.++|.|++.+.++..+++.++- -..+| +.+++. ++.. .+.+-+++++-+++
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~f--d~i~~~-~~~~KP~p~~~~~~~~~lg~~p~ 205 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELV--DGHFDT-KIGHKVESESYRKIADSIGCSTN 205 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGC--SEEECG-GGCCTTCHHHHHHHHHHHTSCGG
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhc--cEEEec-CCCCCCCHHHHHHHHHHhCcCcc
Confidence 578899999999996 5699999999999999999887652 22367 566766 4332 12333445566789
Q ss_pred ceEEEcCChh
Q 041003 133 GVVIVDDTEK 142 (282)
Q Consensus 133 ~vvivDd~~~ 142 (282)
++++|+|+..
T Consensus 206 ~~l~VgDs~~ 215 (261)
T 1yns_A 206 NILFLTDVTR 215 (261)
T ss_dssp GEEEEESCHH
T ss_pred cEEEEcCCHH
Confidence 9999999963
No 122
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=95.21 E-value=0.038 Score=45.56 Aligned_cols=79 Identities=18% Similarity=0.131 Sum_probs=57.8
Q ss_pred EEecccHHHHHHHHhcC--ceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCCC-------ceecccccc--c
Q 041003 61 VKVRSYIRKFLKKASKM--YDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKEK-------GKKSGDLVL--R 129 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~--yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~~-------~~KdL~~l~--~ 129 (282)
+...||+.++|+.+.+. +.+.|.|++.+.++..+++.+.... +| +.+++.++.... +.+=++.++ -
T Consensus 92 ~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f--~~~~~~~~~~~~~k~~~~~~~~~~~~lg~~~ 168 (234)
T 2hcf_A 92 ITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDH-YF--PFGAFADDALDRNELPHIALERARRMTGANY 168 (234)
T ss_dssp EEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCST-TC--SCEECTTTCSSGGGHHHHHHHHHHHHHCCCC
T ss_pred CCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchh-hc--CcceecCCCcCccchHHHHHHHHHHHhCCCC
Confidence 57889999999999875 9999999999999999999886654 56 334444443211 011133455 4
Q ss_pred cCCceEEEcCChh
Q 041003 130 QEWGVVIVDDTEK 142 (282)
Q Consensus 130 ~~~~vvivDd~~~ 142 (282)
+++++++|+|++.
T Consensus 169 ~~~~~i~iGD~~~ 181 (234)
T 2hcf_A 169 SPSQIVIIGDTEH 181 (234)
T ss_dssp CGGGEEEEESSHH
T ss_pred CcccEEEECCCHH
Confidence 7889999999984
No 123
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=95.18 E-value=0.012 Score=47.89 Aligned_cols=76 Identities=16% Similarity=0.074 Sum_probs=56.4
Q ss_pred EEecccHHHHHHHHhcCceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC--C----ceeccccccccCCce
Q 041003 61 VKVRSYIRKFLKKASKMYDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE--K----GKKSGDLVLRQEWGV 134 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~--~----~~KdL~~l~~~~~~v 134 (282)
+...||+.+ |+.+.+.+.++|.|++.+.++..+++.++-.. +| +.+++.+++.. + +.+=++.++ ++++
T Consensus 73 ~~~~~~~~~-l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~-~f--~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~~ 146 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEIAEVYALSNGSINEVKQHLERNGLLR-YF--KGIFSAESVKEYKPSPKVYKYFLDSIG--AKEA 146 (201)
T ss_dssp CEECGGGGG-HHHHHHHSEEEEEESSCHHHHHHHHHHTTCGG-GC--SEEEEGGGGTCCTTCHHHHHHHHHHHT--CSCC
T ss_pred cccCCChHH-HHHHHhCCeEEEEeCcCHHHHHHHHHHCCcHH-hC--cEEEehhhcCCCCCCHHHHHHHHHhcC--CCcE
Confidence 467899999 99996449999999999999999999886543 56 56777766532 1 122233344 7889
Q ss_pred EEEcCChh
Q 041003 135 VIVDDTEK 142 (282)
Q Consensus 135 vivDd~~~ 142 (282)
++|+|++.
T Consensus 147 ~~vGD~~~ 154 (201)
T 2w43_A 147 FLVSSNAF 154 (201)
T ss_dssp EEEESCHH
T ss_pred EEEeCCHH
Confidence 99999984
No 124
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=95.07 E-value=0.018 Score=47.55 Aligned_cols=76 Identities=12% Similarity=0.011 Sum_probs=58.4
Q ss_pred EEecccHHHHHHHHhcCceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC-Ccee-----c---cccccccC
Q 041003 61 VKVRSYIRKFLKKASKMYDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE-KGKK-----S---GDLVLRQE 131 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~-~~~K-----d---L~~l~~~~ 131 (282)
+...|++.++|+.+.+.+.++|.|++.+.++..+++.|. .+| +.+++.++... +.-+ - ++.++-++
T Consensus 98 ~~~~~~~~~~l~~l~~~~~~~i~tn~~~~~~~~~l~~l~---~~f--d~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~~ 172 (240)
T 3smv_A 98 WPAFPDTVEALQYLKKHYKLVILSNIDRNEFKLSNAKLG---VEF--DHIITAQDVGSYKPNPNNFTYMIDALAKAGIEK 172 (240)
T ss_dssp CCBCTTHHHHHHHHHHHSEEEEEESSCHHHHHHHHTTTC---SCC--SEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCCG
T ss_pred CCCCCcHHHHHHHHHhCCeEEEEeCCChhHHHHHHHhcC---Ccc--CEEEEccccCCCCCCHHHHHHHHHHHHhcCCCc
Confidence 467899999999998889999999999999999988865 356 66677665432 1111 2 55666788
Q ss_pred CceEEEcCCh
Q 041003 132 WGVVIVDDTE 141 (282)
Q Consensus 132 ~~vvivDd~~ 141 (282)
+++++|+|+.
T Consensus 173 ~~~~~vGD~~ 182 (240)
T 3smv_A 173 KDILHTAESL 182 (240)
T ss_dssp GGEEEEESCT
T ss_pred hhEEEECCCc
Confidence 9999999985
No 125
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=95.04 E-value=0.014 Score=48.26 Aligned_cols=78 Identities=17% Similarity=0.034 Sum_probs=59.0
Q ss_pred EEecccHHHHHHHHhcCceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC--C----ceeccccccccCCce
Q 041003 61 VKVRSYIRKFLKKASKMYDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE--K----GKKSGDLVLRQEWGV 134 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~--~----~~KdL~~l~~~~~~v 134 (282)
....|++.++|+.+.+.+.++|+|++...++..+++.+.-.. +| +.+++.+++.. + +.+=++.++-+++++
T Consensus 99 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~~-~f--~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 175 (234)
T 3u26_A 99 GELYPEVVEVLKSLKGKYHVGMITDSDTEQAMAFLDALGIKD-LF--DSITTSEEAGFFKPHPRIFELALKKAGVKGEEA 175 (234)
T ss_dssp CCBCTTHHHHHHHHTTTSEEEEEESSCHHHHHHHHHHTTCGG-GC--SEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGE
T ss_pred CCcCcCHHHHHHHHHhCCcEEEEECCCHHHHHHHHHHcCcHH-Hc--ceeEeccccCCCCcCHHHHHHHHHHcCCCchhE
Confidence 457899999999998669999999999999999998876543 56 56676655431 1 222334455678999
Q ss_pred EEEcCCh
Q 041003 135 VIVDDTE 141 (282)
Q Consensus 135 vivDd~~ 141 (282)
++|+|+.
T Consensus 176 ~~vGD~~ 182 (234)
T 3u26_A 176 VYVGDNP 182 (234)
T ss_dssp EEEESCT
T ss_pred EEEcCCc
Confidence 9999996
No 126
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=94.95 E-value=0.016 Score=47.03 Aligned_cols=80 Identities=13% Similarity=0.085 Sum_probs=57.9
Q ss_pred EecccHHHHHHHHhcCceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC--C----ceeccccccccCCceE
Q 041003 62 KVRSYIRKFLKKASKMYDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE--K----GKKSGDLVLRQEWGVV 135 (282)
Q Consensus 62 ~~RP~l~~FL~~~~~~yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~--~----~~KdL~~l~~~~~~vv 135 (282)
...||+.++|+.+.+...++|.|++.+.++..+++.++-.. +| +.+++.+++.. + +.+-++.++-++++++
T Consensus 86 ~~~~~~~~~l~~l~~~g~~~i~s~~~~~~~~~~l~~~~~~~-~f--~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 162 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRYRMYSLNNEGRDLNEYRIRTFGLGE-FL--LAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAV 162 (200)
T ss_dssp CBCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHHTGGG-TC--SCEEEHHHHSCCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred ccCccHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHhCCHHH-hc--ceEEeecccCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 47899999999997655999999999999999998875433 46 55666554321 1 1223344555788999
Q ss_pred EEcCChhhh
Q 041003 136 IVDDTEKVW 144 (282)
Q Consensus 136 ivDd~~~~~ 144 (282)
+|+|++.-.
T Consensus 163 ~vgD~~~Di 171 (200)
T 3cnh_A 163 MVDDRLQNV 171 (200)
T ss_dssp EEESCHHHH
T ss_pred EeCCCHHHH
Confidence 999998533
No 127
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=94.85 E-value=0.008 Score=50.07 Aligned_cols=65 Identities=14% Similarity=-0.057 Sum_probs=42.4
Q ss_pred HHHHhc-CceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCCCcee-ccccccccCCceEEEcCChh
Q 041003 71 LKKASK-MYDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKEKGKK-SGDLVLRQEWGVVIVDDTEK 142 (282)
Q Consensus 71 L~~~~~-~yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~~~~K-dL~~l~~~~~~vvivDd~~~ 142 (282)
|+.+.+ .+.+.|.|++.+..+..+++.+.-.. +| ... ......++ =++.++-+++++++|.|+..
T Consensus 61 l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~-~~-~~~-----k~k~~~~~~~~~~~~~~~~~~~~vGD~~n 127 (195)
T 3n07_A 61 VKALMNAGIEIAIITGRRSQIVENRMKALGISL-IY-QGQ-----DDKVQAYYDICQKLAIAPEQTGYIGDDLI 127 (195)
T ss_dssp HHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE-EE-CSC-----SSHHHHHHHHHHHHCCCGGGEEEEESSGG
T ss_pred HHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE-Ee-eCC-----CCcHHHHHHHHHHhCCCHHHEEEEcCCHH
Confidence 777764 59999999999999999999986543 33 111 00000111 12233446788999999874
No 128
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=94.82 E-value=0.0063 Score=51.22 Aligned_cols=36 Identities=17% Similarity=0.225 Sum_probs=30.2
Q ss_pred ecccHHHHHHHHhc-CceEEEEcCCcHHHHHHHHhhh
Q 041003 63 VRSYIRKFLKKASK-MYDIYLCTTRIRSYAMMMAKLL 98 (282)
Q Consensus 63 ~RP~l~~FL~~~~~-~yei~i~T~~~~~Ya~~v~~~l 98 (282)
..|++.++|+.+.+ -+.++|.|++.+..+..+++.|
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l 125 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTL 125 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHH
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHH
Confidence 57899999999975 5999999999888777777664
No 129
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=94.60 E-value=0.021 Score=47.86 Aligned_cols=77 Identities=8% Similarity=-0.048 Sum_probs=58.0
Q ss_pred EEecccHHHHHHHHhcCceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC------CceeccccccccCCce
Q 041003 61 VKVRSYIRKFLKKASKMYDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE------KGKKSGDLVLRQEWGV 134 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~------~~~KdL~~l~~~~~~v 134 (282)
+...|++.++|+.+.+.+.++|.|++.+.++..+++.+.-. | +.+++.+.... .+.+=++.++-+++++
T Consensus 119 ~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~g~~---f--~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 193 (254)
T 3umc_A 119 LRPWPDTLAGMHALKADYWLAALSNGNTALMLDVARHAGLP---W--DMLLCADLFGHYKPDPQVYLGACRLLDLPPQEV 193 (254)
T ss_dssp CEECTTHHHHHHHHTTTSEEEECCSSCHHHHHHHHHHHTCC---C--SEECCHHHHTCCTTSHHHHHHHHHHHTCCGGGE
T ss_pred CCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcCCC---c--ceEEeecccccCCCCHHHHHHHHHHcCCChHHE
Confidence 46789999999999888999999999999999999988654 6 55555554322 1222344555678999
Q ss_pred EEEcCChh
Q 041003 135 VIVDDTEK 142 (282)
Q Consensus 135 vivDd~~~ 142 (282)
++|+|+..
T Consensus 194 ~~iGD~~~ 201 (254)
T 3umc_A 194 MLCAAHNY 201 (254)
T ss_dssp EEEESCHH
T ss_pred EEEcCchH
Confidence 99999963
No 130
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=94.52 E-value=0.024 Score=47.95 Aligned_cols=80 Identities=6% Similarity=-0.063 Sum_probs=59.9
Q ss_pred EEecccHHHHHHHHhc-CceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCC-C------CceeccccccccCC
Q 041003 61 VKVRSYIRKFLKKASK-MYDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFK-E------KGKKSGDLVLRQEW 132 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~-~yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~-~------~~~KdL~~l~~~~~ 132 (282)
....|++.++|+.+.+ .+.++|.|++...++..+++.++-.. +| ...+++.++.. . .+.+=++.++-+++
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f-~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~ 186 (259)
T 4eek_A 109 VTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTE-LA-GEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPE 186 (259)
T ss_dssp CEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHH-HH-CSCEECGGGGTTCCTTSSHHHHHHHHHTTCCGG
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHh-hc-cceEEeHhhcCcCCCCChHHHHHHHHHcCCCHH
Confidence 5789999999999976 59999999999999999999876443 56 33267666554 2 11223344556789
Q ss_pred ceEEEcCChh
Q 041003 133 GVVIVDDTEK 142 (282)
Q Consensus 133 ~vvivDd~~~ 142 (282)
++++|+|+..
T Consensus 187 ~~i~iGD~~~ 196 (259)
T 4eek_A 187 RCVVIEDSVT 196 (259)
T ss_dssp GEEEEESSHH
T ss_pred HEEEEcCCHH
Confidence 9999999984
No 131
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=94.42 E-value=0.021 Score=52.74 Aligned_cols=80 Identities=14% Similarity=0.054 Sum_probs=59.0
Q ss_pred EEecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCCCccccc-ccEEEccCC-------------CC----Cce
Q 041003 61 VKVRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPKCEYHIS-SRLITREDF-------------KE----KGK 121 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~-~rv~~r~~~-------------~~----~~~ 121 (282)
+...||+.++|+.+.+. +.++|.|++.+.++..+++.++-.. +| . +.+++.++. .+ .+.
T Consensus 214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~-~F-d~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~ 291 (384)
T 1qyi_A 214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP-YF-EADFIATASDVLEAENMYPQARPLGKPNPFSYI 291 (384)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG-GS-CGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHH
T ss_pred CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChH-hc-CCCEEEecccccccccccccccCCCCCCHHHHH
Confidence 56789999999999865 9999999999999999999886443 67 3 267776542 22 122
Q ss_pred ecccccc--------------ccCCceEEEcCChh
Q 041003 122 KSGDLVL--------------RQEWGVVIVDDTEK 142 (282)
Q Consensus 122 KdL~~l~--------------~~~~~vvivDd~~~ 142 (282)
+-+..++ -+++++++|+|++.
T Consensus 292 ~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~ 326 (384)
T 1qyi_A 292 AALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLA 326 (384)
T ss_dssp HHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHH
T ss_pred HHHHHcCCccccccccccccCCCCcCeEEEcCCHH
Confidence 2334444 35789999999983
No 132
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=94.35 E-value=0.066 Score=48.79 Aligned_cols=55 Identities=20% Similarity=0.179 Sum_probs=43.8
Q ss_pred CCeeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHhc-CceEEEEcCCc-
Q 041003 10 KKLHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKASK-MYDIYLCTTRI- 87 (282)
Q Consensus 10 ~kl~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~~-~yei~i~T~~~- 87 (282)
++..+++|+||||++... .=||..++|+.+.+ -..+++.|+++
T Consensus 12 ~~~~~l~D~DGvl~~g~~-----------------------------------~~p~a~~~l~~l~~~g~~~~~vTNn~~ 56 (352)
T 3kc2_A 12 KKIAFAFDIDGVLFRGKK-----------------------------------PIAGASDALKLLNRNKIPYILLTNGGG 56 (352)
T ss_dssp CCEEEEECCBTTTEETTE-----------------------------------ECTTHHHHHHHHHHTTCCEEEECSCCS
T ss_pred cCCEEEEECCCeeEcCCe-----------------------------------eCcCHHHHHHHHHHCCCEEEEEeCCCC
Confidence 678899999999988531 23899999999964 58899999875
Q ss_pred ---HHHHHHHHhhhc
Q 041003 88 ---RSYAMMMAKLLN 99 (282)
Q Consensus 88 ---~~Ya~~v~~~ld 99 (282)
+.||+.+.+.+.
T Consensus 57 ~~~~~~~~~l~~~lg 71 (352)
T 3kc2_A 57 FSERARTEFISSKLD 71 (352)
T ss_dssp SCHHHHHHHHHHHHT
T ss_pred CCchHHHHHHHHhcC
Confidence 788888876543
No 133
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=94.16 E-value=0.04 Score=45.61 Aligned_cols=76 Identities=16% Similarity=0.050 Sum_probs=49.3
Q ss_pred EEEecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC--C----ceeccccccccCC
Q 041003 60 LVKVRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE--K----GKKSGDLVLRQEW 132 (282)
Q Consensus 60 ~v~~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~--~----~~KdL~~l~~~~~ 132 (282)
.+...||+.++|+.+.+. +.++|.|++.+ ++..+++.++-.. +| +.+++.+++.. + +.+-+++++.++
T Consensus 93 ~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~-~f--~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~- 167 (220)
T 2zg6_A 93 EAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKK-YF--DALALSYEIKAVKPNPKIFGFALAKVGYPA- 167 (220)
T ss_dssp EEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGG-GC--SEEC-----------CCHHHHHHHHHCSSE-
T ss_pred CceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHh-He--eEEEeccccCCCCCCHHHHHHHHHHcCCCe-
Confidence 578899999999999875 99999999977 5888888876443 56 55666665432 1 112223333333
Q ss_pred ceEEEcCChh
Q 041003 133 GVVIVDDTEK 142 (282)
Q Consensus 133 ~vvivDd~~~ 142 (282)
++|+|++.
T Consensus 168 --~~vgD~~~ 175 (220)
T 2zg6_A 168 --VHVGDIYE 175 (220)
T ss_dssp --EEEESSCC
T ss_pred --EEEcCCch
Confidence 89999875
No 134
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=94.10 E-value=0.038 Score=45.16 Aligned_cols=78 Identities=10% Similarity=0.039 Sum_probs=57.6
Q ss_pred EEecccHHHHHHHHhc--CceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC-CceeccccccccCCceEEE
Q 041003 61 VKVRSYIRKFLKKASK--MYDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE-KGKKSGDLVLRQEWGVVIV 137 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~--~yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~-~~~KdL~~l~~~~~~vviv 137 (282)
+...|++.++|+.+.+ .+.++|.|++.+.++..+++.+.-.. +| +.+++...... .+.+=++.++-+++++++|
T Consensus 104 ~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~-~f--~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~i 180 (234)
T 3ddh_A 104 IELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSP-YF--DHIEVMSDKTEKEYLRLLSILQIAPSELLMV 180 (234)
T ss_dssp CCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGG-GC--SEEEEESCCSHHHHHHHHHHHTCCGGGEEEE
T ss_pred CCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHh-hh--heeeecCCCCHHHHHHHHHHhCCCcceEEEE
Confidence 4678999999999987 69999999999999999999876543 46 44555433221 1222334455688999999
Q ss_pred cCCh
Q 041003 138 DDTE 141 (282)
Q Consensus 138 Dd~~ 141 (282)
+|+.
T Consensus 181 GD~~ 184 (234)
T 3ddh_A 181 GNSF 184 (234)
T ss_dssp ESCC
T ss_pred CCCc
Confidence 9995
No 135
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=94.09 E-value=0.04 Score=46.38 Aligned_cols=77 Identities=10% Similarity=0.123 Sum_probs=54.1
Q ss_pred EEecccHHHHHHHHhc-CceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCC----------C---C-ce----
Q 041003 61 VKVRSYIRKFLKKASK-MYDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFK----------E---K-GK---- 121 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~-~yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~----------~---~-~~---- 121 (282)
+..+||+.++|+.+.+ .+.++|.|++.+.++..+++.|.+. +.+++.+... + . ..
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~~l~~~------~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~ 149 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEK------DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCG 149 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCG------GGEEEEEEECSSSBCEEECTTCCCTTCCSCCS
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHhcCCCC------CeEEeeeeEEcCCceEEecCCCCccccccccC
Confidence 6789999999999975 5999999999999999999844332 2334433211 1 0 11
Q ss_pred ----eccccccccCCceEEEcCChhh
Q 041003 122 ----KSGDLVLRQEWGVVIVDDTEKV 143 (282)
Q Consensus 122 ----KdL~~l~~~~~~vvivDd~~~~ 143 (282)
+-++.++.+.+++++|+|+..-
T Consensus 150 ~~K~~~~~~~~~~~~~~~~vGDs~~D 175 (236)
T 2fea_A 150 CCKPSVIHELSEPNQYIIMIGDSVTD 175 (236)
T ss_dssp SCHHHHHHHHCCTTCEEEEEECCGGG
T ss_pred CcHHHHHHHHhccCCeEEEEeCChHH
Confidence 3344555678899999999743
No 136
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=93.99 E-value=0.02 Score=47.79 Aligned_cols=77 Identities=12% Similarity=-0.038 Sum_probs=56.8
Q ss_pred EEecccHHHHHHHHhcCceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC------CceeccccccccCCce
Q 041003 61 VKVRSYIRKFLKKASKMYDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE------KGKKSGDLVLRQEWGV 134 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~------~~~KdL~~l~~~~~~v 134 (282)
+...|++.++|+.+.+.+.++|.|++.+.++..+++.+.-. | +.+++.+++.. .+.+=++.++-+.+++
T Consensus 115 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~---f--~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 189 (254)
T 3umg_A 115 LTPWPDSVPGLTAIKAEYIIGPLSNGNTSLLLDMAKNAGIP---W--DVIIGSDINRKYKPDPQAYLRTAQVLGLHPGEV 189 (254)
T ss_dssp CCBCTTHHHHHHHHHHHSEEEECSSSCHHHHHHHHHHHTCC---C--SCCCCHHHHTCCTTSHHHHHHHHHHTTCCGGGE
T ss_pred CcCCcCHHHHHHHHHhCCeEEEEeCCCHHHHHHHHHhCCCC---e--eEEEEcCcCCCCCCCHHHHHHHHHHcCCChHHE
Confidence 45689999999999877999999999999999999988653 5 44454444321 1222334455678999
Q ss_pred EEEcCChh
Q 041003 135 VIVDDTEK 142 (282)
Q Consensus 135 vivDd~~~ 142 (282)
++|+|+..
T Consensus 190 ~~iGD~~~ 197 (254)
T 3umg_A 190 MLAAAHNG 197 (254)
T ss_dssp EEEESCHH
T ss_pred EEEeCChH
Confidence 99999973
No 137
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=93.94 E-value=0.036 Score=47.37 Aligned_cols=77 Identities=12% Similarity=-0.077 Sum_probs=56.8
Q ss_pred EEecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC------CceeccccccccCCc
Q 041003 61 VKVRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE------KGKKSGDLVLRQEWG 133 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~------~~~KdL~~l~~~~~~ 133 (282)
+...||+.++|+.+.+. +.++|.|++.+. +..+++.+.-.. +| +.+++.+++.. .+.+-++.++-++++
T Consensus 105 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~-~f--~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~ 180 (263)
T 3k1z_A 105 WQVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLRE-HF--DFVLTSEAAGWPKPDPRIFQEALRLAHMEPVV 180 (263)
T ss_dssp EEECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGG-GC--SCEEEHHHHSSCTTSHHHHHHHHHHHTCCGGG
T ss_pred ceECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHH-hh--hEEEeecccCCCCCCHHHHHHHHHHcCCCHHH
Confidence 57899999999999865 999999998874 677888776443 56 56676665432 122334455668899
Q ss_pred eEEEcCCh
Q 041003 134 VVIVDDTE 141 (282)
Q Consensus 134 vvivDd~~ 141 (282)
+++|+|++
T Consensus 181 ~~~vGD~~ 188 (263)
T 3k1z_A 181 AAHVGDNY 188 (263)
T ss_dssp EEEEESCH
T ss_pred EEEECCCc
Confidence 99999996
No 138
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=93.72 E-value=0.093 Score=42.60 Aligned_cols=79 Identities=8% Similarity=0.001 Sum_probs=57.1
Q ss_pred EEecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC--C----ceeccccccccCCc
Q 041003 61 VKVRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE--K----GKKSGDLVLRQEWG 133 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~--~----~~KdL~~l~~~~~~ 133 (282)
....|++.++|+.+.+. +.++|.|++.+.++..+++.++-.. +| +.+++.++... + +.+=++.++-+.++
T Consensus 93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~-~~--~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~ 169 (226)
T 1te2_A 93 RPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRD-SF--DALASAEKLPYSKPHPQVYLDCAAKLGVDPLT 169 (226)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GC--SEEEECTTSSCCTTSTHHHHHHHHHHTSCGGG
T ss_pred CCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHh-hC--cEEEeccccCCCCCChHHHHHHHHHcCCCHHH
Confidence 45789999999999764 9999999999999999998875443 45 55566555432 1 11122334557889
Q ss_pred eEEEcCChh
Q 041003 134 VVIVDDTEK 142 (282)
Q Consensus 134 vvivDd~~~ 142 (282)
++.|+|+..
T Consensus 170 ~i~iGD~~n 178 (226)
T 1te2_A 170 CVALEDSVN 178 (226)
T ss_dssp EEEEESSHH
T ss_pred eEEEeCCHH
Confidence 999999984
No 139
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=93.68 E-value=0.081 Score=40.56 Aligned_cols=62 Identities=24% Similarity=0.264 Sum_probs=41.0
Q ss_pred eEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHh-cCceEEEEcCCcHHH-
Q 041003 13 HLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKAS-KMYDIYLCTTRIRSY- 90 (282)
Q Consensus 13 ~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~-~~yei~i~T~~~~~Y- 90 (282)
.+++||||||+.+.... .. -+...|+..+.|+++. +-..+++.|......
T Consensus 3 ~i~~DlDGTL~~~~~~~-~~---------------------------~~~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~~~ 54 (126)
T 1xpj_A 3 KLIVDLDGTLTQANTSD-YR---------------------------NVLPRLDVIEQLREYHQLGFEIVISTARNMRTY 54 (126)
T ss_dssp EEEECSTTTTBCCCCSC-GG---------------------------GCCBCHHHHHHHHHHHHTTCEEEEEECTTTTTT
T ss_pred EEEEecCCCCCCCCCCc-cc---------------------------cCCCCHHHHHHHHHHHhCCCeEEEEeCCChhhc
Confidence 57899999999864310 00 0124577888888885 458888888665432
Q ss_pred -----------HHHHHhhhcCCC
Q 041003 91 -----------AMMMAKLLNPKC 102 (282)
Q Consensus 91 -----------a~~v~~~ldp~~ 102 (282)
+..+++.+...+
T Consensus 55 nG~~~~~~~~~~~~i~~~~~~~~ 77 (126)
T 1xpj_A 55 EGNVGKINIHTLPIITEWLDKHQ 77 (126)
T ss_dssp TTCHHHHHHHTHHHHHHHHHHTT
T ss_pred cccccccCHHHHHHHHHHHHHcC
Confidence 567777775544
No 140
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=93.67 E-value=0.054 Score=44.46 Aligned_cols=76 Identities=9% Similarity=0.016 Sum_probs=56.2
Q ss_pred ecccHHHHHHHHhcC-ceEEEEcCCc---HHHHHHHHhhhcCCCcccccccEEEccCCCC--C----ceeccccccccCC
Q 041003 63 VRSYIRKFLKKASKM-YDIYLCTTRI---RSYAMMMAKLLNPKCEYHISSRLITREDFKE--K----GKKSGDLVLRQEW 132 (282)
Q Consensus 63 ~RP~l~~FL~~~~~~-yei~i~T~~~---~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~--~----~~KdL~~l~~~~~ 132 (282)
..|++.++|+.+.+. +.++|.|++. +.++..+++.++-.. +| +.+++.++... + +.+=++.++-+++
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~-~f--~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~ 176 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLME-FI--DKTFFADEVLSYKPRKEMFEKVLNSFEVKPE 176 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGG-GC--SEEEEHHHHTCCTTCHHHHHHHHHHTTCCGG
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHH-Hh--hhheeccccCCCCCCHHHHHHHHHHcCCCcc
Confidence 489999999999865 9999999999 999999988875443 56 55666554321 1 1222344556789
Q ss_pred ceEEEcCCh
Q 041003 133 GVVIVDDTE 141 (282)
Q Consensus 133 ~vvivDd~~ 141 (282)
+++.|+|++
T Consensus 177 ~~~~iGD~~ 185 (235)
T 2om6_A 177 ESLHIGDTY 185 (235)
T ss_dssp GEEEEESCT
T ss_pred ceEEECCCh
Confidence 999999998
No 141
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=93.64 E-value=0.045 Score=45.23 Aligned_cols=75 Identities=11% Similarity=0.045 Sum_probs=52.0
Q ss_pred ecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC------CceeccccccccCCceE
Q 041003 63 VRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE------KGKKSGDLVLRQEWGVV 135 (282)
Q Consensus 63 ~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~------~~~KdL~~l~~~~~~vv 135 (282)
..||+.++|+.+.+. +.++|.|++.. +..+++.+.-.. +| +.+++.++... .+.+=++.++-++++++
T Consensus 93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~-~f--~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i 167 (233)
T 3nas_A 93 LLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIID-DF--HAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCA 167 (233)
T ss_dssp SCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTT-TC--SEECCC---------CCHHHHHHHHHTSCGGGEE
T ss_pred cCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHh-hc--CEEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEE
Confidence 689999999999876 99999999865 778888876543 46 44555554432 12233344556889999
Q ss_pred EEcCChh
Q 041003 136 IVDDTEK 142 (282)
Q Consensus 136 ivDd~~~ 142 (282)
+|+|++.
T Consensus 168 ~vGDs~~ 174 (233)
T 3nas_A 168 AIEDAEA 174 (233)
T ss_dssp EEECSHH
T ss_pred EEeCCHH
Confidence 9999973
No 142
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=93.64 E-value=0.12 Score=44.53 Aligned_cols=78 Identities=18% Similarity=0.076 Sum_probs=58.8
Q ss_pred EEecccHHHHHHHHhcC--ceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC------Cceeccccccc---
Q 041003 61 VKVRSYIRKFLKKASKM--YDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE------KGKKSGDLVLR--- 129 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~--yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~------~~~KdL~~l~~--- 129 (282)
....||+.++|+.+.+. +.+.|.|++.+.++..+++.++-. .| +.+++.++... .+.+-++.++-
T Consensus 113 ~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~--~f--~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~~ 188 (275)
T 2qlt_A 113 SIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK--RP--EYFITANDVKQGKPHPEPYLKGRNGLGFPIN 188 (275)
T ss_dssp CEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC--CC--SSEECGGGCSSCTTSSHHHHHHHHHTTCCCC
T ss_pred CCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC--cc--CEEEEcccCCCCCCChHHHHHHHHHcCCCcc
Confidence 56789999999999875 899999999999999999988654 25 45666665432 12223345566
Q ss_pred ----cCCceEEEcCChh
Q 041003 130 ----QEWGVVIVDDTEK 142 (282)
Q Consensus 130 ----~~~~vvivDd~~~ 142 (282)
++++++.|.|++.
T Consensus 189 ~~~~~~~~~i~~GDs~n 205 (275)
T 2qlt_A 189 EQDPSKSKVVVFEDAPA 205 (275)
T ss_dssp SSCGGGSCEEEEESSHH
T ss_pred ccCCCcceEEEEeCCHH
Confidence 7889999999983
No 143
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=93.60 E-value=0.11 Score=43.64 Aligned_cols=56 Identities=16% Similarity=0.213 Sum_probs=41.5
Q ss_pred eeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHh-cCceEEEEcCCcHHH
Q 041003 12 LHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKAS-KMYDIYLCTTRIRSY 90 (282)
Q Consensus 12 l~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~-~~yei~i~T~~~~~Y 90 (282)
..+++||||||+.+... ..|...+.|+++. +-..+++.|.-....
T Consensus 4 kli~~DlDGTLl~~~~~----------------------------------i~~~~~~al~~l~~~G~~v~i~TGR~~~~ 49 (231)
T 1wr8_A 4 KAISIDIDGTITYPNRM----------------------------------IHEKALEAIRRAESLGIPIMLVTGNTVQF 49 (231)
T ss_dssp CEEEEESTTTTBCTTSC----------------------------------BCHHHHHHHHHHHHTTCCEEEECSSCHHH
T ss_pred eEEEEECCCCCCCCCCc----------------------------------CCHHHHHHHHHHHHCCCEEEEEcCCChhH
Confidence 36899999999986321 3355677777774 457888888888888
Q ss_pred HHHHHhhhcCC
Q 041003 91 AMMMAKLLNPK 101 (282)
Q Consensus 91 a~~v~~~ldp~ 101 (282)
+..+.+.+...
T Consensus 50 ~~~~~~~l~~~ 60 (231)
T 1wr8_A 50 AEAASILIGTS 60 (231)
T ss_dssp HHHHHHHHTCC
T ss_pred HHHHHHHcCCC
Confidence 88888887654
No 144
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=93.50 E-value=0.14 Score=44.70 Aligned_cols=72 Identities=10% Similarity=0.033 Sum_probs=53.0
Q ss_pred EEecccHHHHHHHHhc-CceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCCCceeccccccccCCceEEEcC
Q 041003 61 VKVRSYIRKFLKKASK-MYDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKEKGKKSGDLVLRQEWGVVIVDD 139 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~-~yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~~~~KdL~~l~~~~~~vvivDd 139 (282)
...+||+.++|+.+.+ .+.+.|.|++.+.++..+++.+.-.. +| ..++ .....+-++.++.. +++++|.|
T Consensus 162 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-~f--~~i~-----~~~K~~~~~~l~~~-~~~~~vGD 232 (287)
T 3a1c_A 162 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL-VI--AEVL-----PHQKSEEVKKLQAK-EVVAFVGD 232 (287)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-EE--CSCC-----TTCHHHHHHHHTTT-CCEEEEEC
T ss_pred cccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCce-ee--eecC-----hHHHHHHHHHHhcC-CeEEEEEC
Confidence 4589999999999976 49999999999999999999986543 44 2222 11112334455556 89999999
Q ss_pred Ch
Q 041003 140 TE 141 (282)
Q Consensus 140 ~~ 141 (282)
+.
T Consensus 233 s~ 234 (287)
T 3a1c_A 233 GI 234 (287)
T ss_dssp TT
T ss_pred CH
Confidence 87
No 145
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=93.48 E-value=0.08 Score=42.21 Aligned_cols=78 Identities=14% Similarity=0.049 Sum_probs=55.3
Q ss_pred EEecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC--C----ceeccccccccCCc
Q 041003 61 VKVRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE--K----GKKSGDLVLRQEWG 133 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~--~----~~KdL~~l~~~~~~ 133 (282)
...+|++.++|+.+.+. +.++++|++...++. +++.++-.. +| +.+++.++... + +.+=++.++-+++.
T Consensus 84 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~-~f--~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~ 159 (207)
T 2go7_A 84 VVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVES-YF--TEILTSQSGFVRKPSPEAATYLLDKYQLNSDN 159 (207)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGG-GE--EEEECGGGCCCCTTSSHHHHHHHHHHTCCGGG
T ss_pred ceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchh-he--eeEEecCcCCCCCCCcHHHHHHHHHhCCCccc
Confidence 56799999999999875 999999999999999 888875443 45 44555554321 1 11122334457889
Q ss_pred eEEEcCChh
Q 041003 134 VVIVDDTEK 142 (282)
Q Consensus 134 vvivDd~~~ 142 (282)
++.|+|+..
T Consensus 160 ~~~iGD~~n 168 (207)
T 2go7_A 160 TYYIGDRTL 168 (207)
T ss_dssp EEEEESSHH
T ss_pred EEEECCCHH
Confidence 999999974
No 146
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=93.45 E-value=0.039 Score=46.75 Aligned_cols=76 Identities=12% Similarity=0.073 Sum_probs=56.8
Q ss_pred EecccHHHHHHHHh-cCceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC------CceeccccccccCCce
Q 041003 62 KVRSYIRKFLKKAS-KMYDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE------KGKKSGDLVLRQEWGV 134 (282)
Q Consensus 62 ~~RP~l~~FL~~~~-~~yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~------~~~KdL~~l~~~~~~v 134 (282)
...||+.++|+.+. +.+.+.+.|++.. +..+++.+.-.. +| +.+++.++... .+.+-+++++-+++++
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~-~f--d~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~ 169 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELRE-FF--TFCADASQLKNSKPDPEIFLAACAGLGVPPQAC 169 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGG-GC--SEECCGGGCSSCTTSTHHHHHHHHHHTSCGGGE
T ss_pred cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcc-cc--ccccccccccCCCCcHHHHHHHHHHcCCChHHE
Confidence 46799999999996 5688999988654 677888876544 56 66777666542 2445566777789999
Q ss_pred EEEcCChh
Q 041003 135 VIVDDTEK 142 (282)
Q Consensus 135 vivDd~~~ 142 (282)
|+|+|++.
T Consensus 170 l~VgDs~~ 177 (243)
T 4g9b_A 170 IGIEDAQA 177 (243)
T ss_dssp EEEESSHH
T ss_pred EEEcCCHH
Confidence 99999984
No 147
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=93.37 E-value=0.11 Score=42.22 Aligned_cols=79 Identities=15% Similarity=0.040 Sum_probs=57.0
Q ss_pred EEecccHHHHHHHHhc-CceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC--C----ceeccccccccCCc
Q 041003 61 VKVRSYIRKFLKKASK-MYDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE--K----GKKSGDLVLRQEWG 133 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~-~yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~--~----~~KdL~~l~~~~~~ 133 (282)
+...|++.++|+.+.+ .+.+++.|++.+.++..+++.++-.. +| +.+++.++... + +.+=++.++-+++.
T Consensus 88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~ 164 (225)
T 3d6j_A 88 TILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDD-WF--DIIIGGEDVTHHKPDPEGLLLAIDRLKACPEE 164 (225)
T ss_dssp CEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTT-CC--SEEECGGGCSSCTTSTHHHHHHHHHTTCCGGG
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchh-he--eeeeehhhcCCCCCChHHHHHHHHHhCCChHH
Confidence 4568999999999975 58999999999999999998876443 45 45565554432 1 11223344557889
Q ss_pred eEEEcCChh
Q 041003 134 VVIVDDTEK 142 (282)
Q Consensus 134 vvivDd~~~ 142 (282)
++.|+|++.
T Consensus 165 ~i~iGD~~n 173 (225)
T 3d6j_A 165 VLYIGDSTV 173 (225)
T ss_dssp EEEEESSHH
T ss_pred eEEEcCCHH
Confidence 999999974
No 148
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=93.36 E-value=0.068 Score=45.14 Aligned_cols=57 Identities=12% Similarity=0.112 Sum_probs=45.0
Q ss_pred eeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHhc-CceEEEEcCCcHHH
Q 041003 12 LHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKASK-MYDIYLCTTRIRSY 90 (282)
Q Consensus 12 l~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~~-~yei~i~T~~~~~Y 90 (282)
..+++||||||+.+.. .+.|...+.|+++.+ ...+++.|......
T Consensus 6 kli~~DlDGTLl~~~~----------------------------------~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~ 51 (227)
T 1l6r_A 6 RLAAIDVDGNLTDRDR----------------------------------LISTKAIESIRSAEKKGLTVSLLSGNVIPV 51 (227)
T ss_dssp CEEEEEHHHHSBCTTS----------------------------------CBCHHHHHHHHHHHHTTCEEEEECSSCHHH
T ss_pred EEEEEECCCCCcCCCC----------------------------------cCCHHHHHHHHHHHHCCCEEEEECCCCcHH
Confidence 4789999999997521 145678888998865 58999999999999
Q ss_pred HHHHHhhhcCCC
Q 041003 91 AMMMAKLLNPKC 102 (282)
Q Consensus 91 a~~v~~~ldp~~ 102 (282)
+..+++.+...+
T Consensus 52 ~~~~~~~l~~~~ 63 (227)
T 1l6r_A 52 VYALKIFLGING 63 (227)
T ss_dssp HHHHHHHHTCCS
T ss_pred HHHHHHHhCCCC
Confidence 999998886543
No 149
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=93.32 E-value=0.062 Score=45.22 Aligned_cols=78 Identities=10% Similarity=-0.043 Sum_probs=56.5
Q ss_pred EEecccHHHHHHHHhcCceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC-CceeccccccccCCceEEEcC
Q 041003 61 VKVRSYIRKFLKKASKMYDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE-KGKKSGDLVLRQEWGVVIVDD 139 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~-~~~KdL~~l~~~~~~vvivDd 139 (282)
+...||+.++|+.+.+.+.+.|.|++...++..+++.++-.. +| +.+++...... .+.+=++.++-++++++.|.|
T Consensus 111 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~-~f--~~i~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD 187 (251)
T 2pke_A 111 VEVIAGVREAVAAIAADYAVVLITKGDLFHQEQKIEQSGLSD-LF--PRIEVVSEKDPQTYARVLSEFDLPAERFVMIGN 187 (251)
T ss_dssp CCBCTTHHHHHHHHHTTSEEEEEEESCHHHHHHHHHHHSGGG-TC--CCEEEESCCSHHHHHHHHHHHTCCGGGEEEEES
T ss_pred CCcCccHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCcHH-hC--ceeeeeCCCCHHHHHHHHHHhCcCchhEEEECC
Confidence 457899999999998779999999999999999998876443 46 45555322111 122233445557889999999
Q ss_pred Ch
Q 041003 140 TE 141 (282)
Q Consensus 140 ~~ 141 (282)
++
T Consensus 188 ~~ 189 (251)
T 2pke_A 188 SL 189 (251)
T ss_dssp CC
T ss_pred Cc
Confidence 97
No 150
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=93.20 E-value=0.067 Score=44.66 Aligned_cols=80 Identities=10% Similarity=-0.087 Sum_probs=58.1
Q ss_pred EEecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC------CceeccccccccCCc
Q 041003 61 VKVRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE------KGKKSGDLVLRQEWG 133 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~------~~~KdL~~l~~~~~~ 133 (282)
....||+.++|+.+.+. +.++|.|++.+.++...++. .-.. +|..+.+++.++... .+.+=+++++-++++
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~-~f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~~~ 185 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPG-MFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADE 185 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTT-TCCGGGEECTTTCSSCTTSSHHHHHHHHHTTCCGGG
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHH-hcCcceEEeHHhCCCCCCChHHHHHHHHHcCCCHHH
Confidence 56789999999999865 99999999999998888876 4333 451145666665432 122334455668899
Q ss_pred eEEEcCChh
Q 041003 134 VVIVDDTEK 142 (282)
Q Consensus 134 vvivDd~~~ 142 (282)
+++|+|++.
T Consensus 186 ~i~vGD~~~ 194 (243)
T 3qxg_A 186 AVVIENAPL 194 (243)
T ss_dssp EEEEECSHH
T ss_pred eEEEeCCHH
Confidence 999999983
No 151
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=92.94 E-value=0.044 Score=45.83 Aligned_cols=78 Identities=12% Similarity=-0.111 Sum_probs=53.0
Q ss_pred EEecccHHHHHHHHhcCceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCCCceeccccccccCCceEEEcCC
Q 041003 61 VKVRSYIRKFLKKASKMYDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKEKGKKSGDLVLRQEWGVVIVDDT 140 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~~~~KdL~~l~~~~~~vvivDd~ 140 (282)
+...||+.++|+.+.+...++|.|++.+.++..+++.++-.. +| ...+.. ........+.+.. +-+++++++|+|+
T Consensus 95 ~~~~~g~~~~l~~l~~~g~~~i~Tn~~~~~~~~~l~~~gl~~-~f-~~~~~~-~~~K~~~~~~~~~-~~~~~~~~~vgDs 170 (231)
T 2p11_A 95 SRVYPGALNALRHLGARGPTVILSDGDVVFQPRKIARSGLWD-EV-EGRVLI-YIHKELMLDQVME-CYPARHYVMVDDK 170 (231)
T ss_dssp GGBCTTHHHHHHHHHTTSCEEEEEECCSSHHHHHHHHTTHHH-HT-TTCEEE-ESSGGGCHHHHHH-HSCCSEEEEECSC
T ss_pred CCcCccHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHcCcHH-hc-CeeEEe-cCChHHHHHHHHh-cCCCceEEEEcCc
Confidence 467899999999998766899999999999999998875432 55 222211 1111111222222 3367899999999
Q ss_pred hh
Q 041003 141 EK 142 (282)
Q Consensus 141 ~~ 142 (282)
+.
T Consensus 171 ~~ 172 (231)
T 2p11_A 171 LR 172 (231)
T ss_dssp HH
T ss_pred cc
Confidence 85
No 152
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=92.79 E-value=0.047 Score=45.86 Aligned_cols=79 Identities=9% Similarity=0.003 Sum_probs=54.2
Q ss_pred EEecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhh-hcCCCcccccccEEEcc--CCCC------Cceecccccccc
Q 041003 61 VKVRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKL-LNPKCEYHISSRLITRE--DFKE------KGKKSGDLVLRQ 130 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~-ldp~~~~f~~~rv~~r~--~~~~------~~~KdL~~l~~~ 130 (282)
+...||+.++|+.+.+. +.++|.|++.+.++...+.. ++-. .+| +.+++.+ +... .+.+=++.++-+
T Consensus 111 ~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~-~~f--~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~ 187 (250)
T 3l5k_A 111 AALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFF-SLF--SHIVLGDDPEVQHGKPDPDIFLACAKRFSPP 187 (250)
T ss_dssp CCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHH-TTS--SCEECTTCTTCCSCTTSTHHHHHHHHTSSSC
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHH-hhe--eeEEecchhhccCCCCChHHHHHHHHHcCCC
Confidence 56899999999999875 99999999998887776532 2211 245 4566666 4332 122334445555
Q ss_pred C--CceEEEcCChh
Q 041003 131 E--WGVVIVDDTEK 142 (282)
Q Consensus 131 ~--~~vvivDd~~~ 142 (282)
+ +++++|+|+..
T Consensus 188 ~~~~~~i~iGD~~~ 201 (250)
T 3l5k_A 188 PAMEKCLVFEDAPN 201 (250)
T ss_dssp CCGGGEEEEESSHH
T ss_pred CCcceEEEEeCCHH
Confidence 5 99999999984
No 153
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=92.48 E-value=0.024 Score=49.74 Aligned_cols=110 Identities=13% Similarity=-0.017 Sum_probs=64.4
Q ss_pred CeeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHhc-CceEEEEcCCcHH
Q 041003 11 KLHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKASK-MYDIYLCTTRIRS 89 (282)
Q Consensus 11 kl~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~~-~yei~i~T~~~~~ 89 (282)
...+++|.|+|+-...... ...+. + .......||+.++|+.+.+ -+.++|.|+....
T Consensus 159 ~~~i~iD~dgtl~~~~~~~--~~~~~-------------------~-~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~ 216 (301)
T 1ltq_A 159 PKAVIFDVDGTLAKMNGRG--PYDLE-------------------K-CDTDVINPMVVELSKMYALMGYQIVVVSGRESG 216 (301)
T ss_dssp CEEEEEETBTTTBCCSSCC--TTCGG-------------------G-GGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCC
T ss_pred cceEEEeCCCCcccccCCC--chhhh-------------------h-ccccCCChHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 3577899999987654321 10010 0 0113468999999999975 5999999999988
Q ss_pred HHHHHHhhhcC--------CCcccccccEEEccCCCCC-----ceeccccccccC-CceEEEcCChhhh
Q 041003 90 YAMMMAKLLNP--------KCEYHISSRLITREDFKEK-----GKKSGDLVLRQE-WGVVIVDDTEKVW 144 (282)
Q Consensus 90 Ya~~v~~~ldp--------~~~~f~~~rv~~r~~~~~~-----~~KdL~~l~~~~-~~vvivDd~~~~~ 144 (282)
++..+...|+- .+..| +.++.+++...+ +.+-+..+..+. +.+++|+|++.-.
T Consensus 217 ~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di 283 (301)
T 1ltq_A 217 TKEDPTKYYRMTRKWVEDIAGVPL--VMQCQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVV 283 (301)
T ss_dssp CSSSTTHHHHHHHHHHHHTTCCCC--SEEEECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHH
T ss_pred cchhHHHHHHhcccccccccCCCc--hheeeccCCCCcHHHHHHHHHHHHHhccccceEEEeCCcHHHH
Confidence 77443333322 23235 556766654221 111122333333 3468899998443
No 154
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=92.38 E-value=0.21 Score=43.19 Aligned_cols=57 Identities=19% Similarity=0.266 Sum_probs=40.9
Q ss_pred CeeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHhc-CceEEEEcCCcHH
Q 041003 11 KLHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKASK-MYDIYLCTTRIRS 89 (282)
Q Consensus 11 kl~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~~-~yei~i~T~~~~~ 89 (282)
...+++||||||+.+... .-|...+.|+++.+ -..++|.|.-...
T Consensus 9 ~~li~~DlDGTLl~~~~~----------------------------------~~~~~~~~l~~l~~~G~~~~iaTGR~~~ 54 (275)
T 1xvi_A 9 PLLVFSDLDGTLLDSHSY----------------------------------DWQPAAPWLTRLREANVPVILCSSKTSA 54 (275)
T ss_dssp CEEEEEECTTTTSCSSCC----------------------------------SCCTTHHHHHHHHHTTCCEEEECSSCHH
T ss_pred ceEEEEeCCCCCCCCCCc----------------------------------CCHHHHHHHHHHHHCCCeEEEEcCCCHH
Confidence 467899999999975321 11334677777754 4788888888888
Q ss_pred HHHHHHhhhcCC
Q 041003 90 YAMMMAKLLNPK 101 (282)
Q Consensus 90 Ya~~v~~~ldp~ 101 (282)
.+..+++.+...
T Consensus 55 ~~~~~~~~l~~~ 66 (275)
T 1xvi_A 55 EMLYLQKTLGLQ 66 (275)
T ss_dssp HHHHHHHHTTCT
T ss_pred HHHHHHHHcCCC
Confidence 888888877544
No 155
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=92.37 E-value=0.16 Score=44.01 Aligned_cols=18 Identities=28% Similarity=0.104 Sum_probs=13.7
Q ss_pred CCCeeEEEeCCCceeeee
Q 041003 9 QKKLHLVLDLDQTLPHAV 26 (282)
Q Consensus 9 ~~kl~LVLDLD~TLihs~ 26 (282)
.+...+++||||||+.+.
T Consensus 19 ~~~kli~~DlDGTLl~~~ 36 (285)
T 3pgv_A 19 GMYQVVASDLDGTLLSPD 36 (285)
T ss_dssp --CCEEEEECCCCCSCTT
T ss_pred CcceEEEEeCcCCCCCCC
Confidence 345678999999999864
No 156
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=92.06 E-value=0.24 Score=42.41 Aligned_cols=56 Identities=25% Similarity=0.197 Sum_probs=39.6
Q ss_pred CeeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHh-cCceEEEEcCCcHH
Q 041003 11 KLHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKAS-KMYDIYLCTTRIRS 89 (282)
Q Consensus 11 kl~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~-~~yei~i~T~~~~~ 89 (282)
...+++||||||+.+... .-|...+.|+++. +-..+++.|.-...
T Consensus 5 ~kli~fDlDGTLl~~~~~----------------------------------i~~~~~~al~~l~~~G~~~~iaTGR~~~ 50 (279)
T 4dw8_A 5 YKLIVLDLDGTLTNSKKE----------------------------------ISSRNRETLIRIQEQGIRLVLASGRPTY 50 (279)
T ss_dssp CCEEEECCCCCCSCTTSC----------------------------------CCHHHHHHHHHHHHTTCEEEEECSSCHH
T ss_pred ceEEEEeCCCCCCCCCCc----------------------------------cCHHHHHHHHHHHHCCCEEEEEcCCChH
Confidence 357899999999976431 2245566677764 45788888877777
Q ss_pred HHHHHHhhhcC
Q 041003 90 YAMMMAKLLNP 100 (282)
Q Consensus 90 Ya~~v~~~ldp 100 (282)
-+..+++.+..
T Consensus 51 ~~~~~~~~l~~ 61 (279)
T 4dw8_A 51 GIVPLANELRM 61 (279)
T ss_dssp HHHHHHHHTTG
T ss_pred HHHHHHHHhCC
Confidence 77778777753
No 157
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=91.97 E-value=0.2 Score=43.11 Aligned_cols=17 Identities=29% Similarity=0.362 Sum_probs=13.9
Q ss_pred CeeEEEeCCCceeeeec
Q 041003 11 KLHLVLDLDQTLPHAVD 27 (282)
Q Consensus 11 kl~LVLDLD~TLihs~~ 27 (282)
...+++||||||+.+..
T Consensus 6 ~kli~fDlDGTLl~~~~ 22 (290)
T 3dnp_A 6 KQLLALNIDGALLRSNG 22 (290)
T ss_dssp CCEEEECCCCCCSCTTS
T ss_pred ceEEEEcCCCCCCCCCC
Confidence 35789999999998743
No 158
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=91.96 E-value=0.24 Score=42.36 Aligned_cols=57 Identities=16% Similarity=0.150 Sum_probs=32.4
Q ss_pred CeeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHh-cCceEEEEcCCcHH
Q 041003 11 KLHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKAS-KMYDIYLCTTRIRS 89 (282)
Q Consensus 11 kl~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~-~~yei~i~T~~~~~ 89 (282)
...+++||||||+.+... .-|...+.|+++. +-..+++.|.-...
T Consensus 5 ~kli~~DlDGTLl~~~~~----------------------------------i~~~~~~al~~l~~~G~~~~iaTGR~~~ 50 (279)
T 3mpo_A 5 IKLIAIDIDGTLLNEKNE----------------------------------LAQATIDAVQAAKAQGIKVVLCTGRPLT 50 (279)
T ss_dssp CCEEEECC---------------------------------------------CHHHHHHHHHHHHTTCEEEEECSSCHH
T ss_pred eEEEEEcCcCCCCCCCCc----------------------------------CCHHHHHHHHHHHHCCCEEEEEcCCCHH
Confidence 356899999999987431 2344566666664 45778888877777
Q ss_pred HHHHHHhhhcCC
Q 041003 90 YAMMMAKLLNPK 101 (282)
Q Consensus 90 Ya~~v~~~ldp~ 101 (282)
-+..+++.++..
T Consensus 51 ~~~~~~~~l~~~ 62 (279)
T 3mpo_A 51 GVQPYLDAMDID 62 (279)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHcCCC
Confidence 777888877654
No 159
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=91.76 E-value=0.083 Score=42.83 Aligned_cols=99 Identities=15% Similarity=0.039 Sum_probs=56.9
Q ss_pred CCeeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHhc-CceEEEEcCCcH
Q 041003 10 KKLHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKASK-MYDIYLCTTRIR 88 (282)
Q Consensus 10 ~kl~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~~-~yei~i~T~~~~ 88 (282)
+-..||+|+||||...... .++. ...--.+..|.+. .|+.+.+ -+.+.|-|+.
T Consensus 8 ~ikliv~D~DGtL~d~~~~--~~~~--------------------g~~~~~f~~~D~~--~L~~Lk~~Gi~~~I~Tg~-- 61 (168)
T 3ewi_A 8 EIKLLVCNIDGCLTNGHIY--VSGD--------------------QKEIISYDVKDAI--GISLLKKSGIEVRLISER-- 61 (168)
T ss_dssp CCCEEEEECCCCCSCSCCB--CCSS--------------------CCCEEEEEHHHHH--HHHHHHHTTCEEEEECSS--
T ss_pred cCcEEEEeCccceECCcEE--EcCC--------------------CCEEEEEecCcHH--HHHHHHHCCCEEEEEeCc--
Confidence 3457899999999876432 1100 0001122445553 5777764 5999999988
Q ss_pred HHHHHHHh--hhcCCCcccccccEEEccCCCCCceec-cccccccCCceEEEcCChh
Q 041003 89 SYAMMMAK--LLNPKCEYHISSRLITREDFKEKGKKS-GDLVLRQEWGVVIVDDTEK 142 (282)
Q Consensus 89 ~Ya~~v~~--~ldp~~~~f~~~rv~~r~~~~~~~~Kd-L~~l~~~~~~vvivDd~~~ 142 (282)
..+..+++ .++-. +| .+ .......++. ++.++-+++.+++|-|+..
T Consensus 62 ~~~~~~l~~l~lgi~--~~-~g-----~~~K~~~l~~~~~~~gi~~~~~~~vGD~~n 110 (168)
T 3ewi_A 62 ACSKQTLSALKLDCK--TE-VS-----VSDKLATVDEWRKEMGLCWKEVAYLGNEVS 110 (168)
T ss_dssp CCCHHHHHTTCCCCC--EE-CS-----CSCHHHHHHHHHHHTTCCGGGEEEECCSGG
T ss_pred HHHHHHHHHhCCCcE--EE-EC-----CCChHHHHHHHHHHcCcChHHEEEEeCCHh
Confidence 78888988 44432 33 11 1110011121 1233447789999999874
No 160
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=91.56 E-value=0.11 Score=48.19 Aligned_cols=78 Identities=17% Similarity=-0.017 Sum_probs=57.1
Q ss_pred EEecccHHHHHHHHhcC-ceEEEEcCC------cHHHHHHHHhhhcCCCcccccccEEEccCCCC------Cceeccccc
Q 041003 61 VKVRSYIRKFLKKASKM-YDIYLCTTR------IRSYAMMMAKLLNPKCEYHISSRLITREDFKE------KGKKSGDLV 127 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~-yei~i~T~~------~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~------~~~KdL~~l 127 (282)
+...||+.++|+.+.+. |.++|.|++ .+......+..|+. +| +.+++.++... .+.+-++++
T Consensus 99 ~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~---~f--d~i~~~~~~~~~KP~p~~~~~~~~~l 173 (555)
T 3i28_A 99 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKM---HF--DFLIESCQVGMVKPEPQIYKFLLDTL 173 (555)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHT---TS--SEEEEHHHHTCCTTCHHHHHHHHHHH
T ss_pred cCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhh---he--eEEEeccccCCCCCCHHHHHHHHHHc
Confidence 56889999999999876 999999999 66665555545543 57 56777765442 234455666
Q ss_pred cccCCceEEEcCChhh
Q 041003 128 LRQEWGVVIVDDTEKV 143 (282)
Q Consensus 128 ~~~~~~vvivDd~~~~ 143 (282)
+-+++++++|+|+..-
T Consensus 174 g~~p~~~~~v~D~~~d 189 (555)
T 3i28_A 174 KASPSEVVFLDDIGAN 189 (555)
T ss_dssp TCCGGGEEEEESCHHH
T ss_pred CCChhHEEEECCcHHH
Confidence 6688999999999843
No 161
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=91.51 E-value=0.33 Score=41.61 Aligned_cols=57 Identities=19% Similarity=0.169 Sum_probs=36.9
Q ss_pred eeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHhcCceEEEEcCCcHHHH
Q 041003 12 LHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKASKMYDIYLCTTRIRSYA 91 (282)
Q Consensus 12 l~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~~~yei~i~T~~~~~Ya 91 (282)
..+++||||||+.+... . -|...+.|++..+-..+++.|.-...-+
T Consensus 3 kli~~DlDGTLl~~~~~--i--------------------------------~~~~~~al~~~~~Gi~v~iaTGR~~~~~ 48 (268)
T 1nf2_A 3 RVFVFDLDGTLLNDNLE--I--------------------------------SEKDRRNIEKLSRKCYVVFASGRMLVST 48 (268)
T ss_dssp CEEEEECCCCCSCTTSC--C--------------------------------CHHHHHHHHHHTTTSEEEEECSSCHHHH
T ss_pred cEEEEeCCCcCCCCCCc--c--------------------------------CHHHHHHHHHHhCCCEEEEECCCChHHH
Confidence 36899999999986321 1 2334555555223467777777777777
Q ss_pred HHHHhhhcCCC
Q 041003 92 MMMAKLLNPKC 102 (282)
Q Consensus 92 ~~v~~~ldp~~ 102 (282)
..+++.++..+
T Consensus 49 ~~~~~~l~~~~ 59 (268)
T 1nf2_A 49 LNVEKKYFKRT 59 (268)
T ss_dssp HHHHHHHSSSC
T ss_pred HHHHHHhCCCC
Confidence 77777776543
No 162
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=91.48 E-value=0.31 Score=42.24 Aligned_cols=56 Identities=23% Similarity=0.211 Sum_probs=37.9
Q ss_pred eeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHhc-CceEEEEcCCcHHH
Q 041003 12 LHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKASK-MYDIYLCTTRIRSY 90 (282)
Q Consensus 12 l~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~~-~yei~i~T~~~~~Y 90 (282)
..+++||||||+.+... ..|...+.|+++.+ -..+++.|.-+...
T Consensus 5 kli~~DlDGTLl~~~~~----------------------------------i~~~~~~al~~l~~~G~~~~iaTGR~~~~ 50 (288)
T 1nrw_A 5 KLIAIDLDGTLLNSKHQ----------------------------------VSLENENALRQAQRDGIEVVVSTGRAHFD 50 (288)
T ss_dssp CEEEEECCCCCSCTTSC----------------------------------CCHHHHHHHHHHHHTTCEEEEECSSCHHH
T ss_pred EEEEEeCCCCCCCCCCc----------------------------------cCHHHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence 46899999999987421 12344556666643 46777888777777
Q ss_pred HHHHHhhhcCC
Q 041003 91 AMMMAKLLNPK 101 (282)
Q Consensus 91 a~~v~~~ldp~ 101 (282)
+..+++.+...
T Consensus 51 ~~~~~~~l~~~ 61 (288)
T 1nrw_A 51 VMSIFEPLGIK 61 (288)
T ss_dssp HHHHHGGGTCC
T ss_pred HHHHHHHcCCC
Confidence 77777776543
No 163
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=91.41 E-value=0.21 Score=43.18 Aligned_cols=60 Identities=13% Similarity=0.134 Sum_probs=35.4
Q ss_pred cCCCeeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHh-cCceEEEEcCC
Q 041003 8 RQKKLHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKAS-KMYDIYLCTTR 86 (282)
Q Consensus 8 ~~~kl~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~-~~yei~i~T~~ 86 (282)
..+...+++||||||+.+... .. -|...+-|+++. +-..+++.|.-
T Consensus 18 ~~~~kli~~DlDGTLl~~~~~-~i--------------------------------~~~~~~al~~l~~~G~~v~iaTGR 64 (283)
T 3dao_A 18 QGMIKLIATDIDGTLVKDGSL-LI--------------------------------DPEYMSVIDRLIDKGIIFVVCSGR 64 (283)
T ss_dssp -CCCCEEEECCBTTTBSTTCS-CC--------------------------------CHHHHHHHHHHHHTTCEEEEECSS
T ss_pred ccCceEEEEeCcCCCCCCCCC-cC--------------------------------CHHHHHHHHHHHHCCCEEEEEcCC
Confidence 345568999999999977431 11 233445555553 34566666665
Q ss_pred cHHHHHHHHhhhcC
Q 041003 87 IRSYAMMMAKLLNP 100 (282)
Q Consensus 87 ~~~Ya~~v~~~ldp 100 (282)
...-+..+++.+.+
T Consensus 65 ~~~~~~~~~~~l~~ 78 (283)
T 3dao_A 65 QFSSEFKLFAPIKH 78 (283)
T ss_dssp CHHHHHHHTGGGGG
T ss_pred CHHHHHHHHHHcCC
Confidence 55555566655543
No 164
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=91.36 E-value=0.22 Score=43.14 Aligned_cols=57 Identities=18% Similarity=0.125 Sum_probs=37.2
Q ss_pred CeeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHhc-CceEEEEcCCcHH
Q 041003 11 KLHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKASK-MYDIYLCTTRIRS 89 (282)
Q Consensus 11 kl~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~~-~yei~i~T~~~~~ 89 (282)
...+++||||||+.+... .-|...+.|+++.+ -..+++.|.-...
T Consensus 5 ~kli~~DlDGTLl~~~~~----------------------------------i~~~~~~aL~~l~~~Gi~vviaTGR~~~ 50 (282)
T 1rkq_A 5 IKLIAIDMDGTLLLPDHT----------------------------------ISPAVKNAIAAARARGVNVVLTTGRPYA 50 (282)
T ss_dssp CCEEEECCCCCCSCTTSC----------------------------------CCHHHHHHHHHHHHTTCEEEEECSSCGG
T ss_pred ceEEEEeCCCCCCCCCCc----------------------------------CCHHHHHHHHHHHHCCCEEEEEcCCCHH
Confidence 347899999999986321 12344566666654 4667777766666
Q ss_pred HHHHHHhhhcCC
Q 041003 90 YAMMMAKLLNPK 101 (282)
Q Consensus 90 Ya~~v~~~ldp~ 101 (282)
-+..+++.+...
T Consensus 51 ~~~~~~~~l~l~ 62 (282)
T 1rkq_A 51 GVHNYLKELHME 62 (282)
T ss_dssp GTHHHHHHTTCC
T ss_pred HHHHHHHHhCCC
Confidence 666777766543
No 165
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=91.27 E-value=0.24 Score=39.26 Aligned_cols=75 Identities=9% Similarity=0.041 Sum_probs=51.1
Q ss_pred ecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC--C----ceeccccccccCCceE
Q 041003 63 VRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE--K----GKKSGDLVLRQEWGVV 135 (282)
Q Consensus 63 ~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~--~----~~KdL~~l~~~~~~vv 135 (282)
..|++.++|+.+.+. +.+++.|++. .++..+++.+.-.. +| +.+++.+++.. + +.+=++.++-+ +++
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~l~~~~~~~-~f--~~~~~~~~~~~~kp~~~~~~~~~~~~~~~--~~~ 156 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRN-DQVLEILEKTSIAA-YF--TEVVTSSSGFKRKPNPESMLYLREKYQIS--SGL 156 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSC-THHHHHHHHTTCGG-GE--EEEECGGGCCCCTTSCHHHHHHHHHTTCS--SEE
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCc-HHHHHHHHHcCCHh-he--eeeeeccccCCCCCCHHHHHHHHHHcCCC--eEE
Confidence 789999999999765 9999999876 47888888775443 45 55566555432 1 11112233334 899
Q ss_pred EEcCChhh
Q 041003 136 IVDDTEKV 143 (282)
Q Consensus 136 ivDd~~~~ 143 (282)
.|+|++.-
T Consensus 157 ~iGD~~~D 164 (190)
T 2fi1_A 157 VIGDRPID 164 (190)
T ss_dssp EEESSHHH
T ss_pred EEcCCHHH
Confidence 99999743
No 166
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=91.23 E-value=0.21 Score=42.33 Aligned_cols=15 Identities=27% Similarity=0.310 Sum_probs=13.0
Q ss_pred eeEEEeCCCceeeee
Q 041003 12 LHLVLDLDQTLPHAV 26 (282)
Q Consensus 12 l~LVLDLD~TLihs~ 26 (282)
..+++||||||+.+.
T Consensus 4 kli~~DlDGTLl~~~ 18 (258)
T 2pq0_A 4 KIVFFDIDGTLLDEQ 18 (258)
T ss_dssp CEEEECTBTTTBCTT
T ss_pred eEEEEeCCCCCcCCC
Confidence 468999999999875
No 167
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=91.12 E-value=0.13 Score=44.45 Aligned_cols=78 Identities=9% Similarity=0.045 Sum_probs=53.7
Q ss_pred EEecccHHHHHHHHhcCceEEEEcCCcHHHHHHHHhhhcCC----------CcccccccEEEccC-CCC----Cceeccc
Q 041003 61 VKVRSYIRKFLKKASKMYDIYLCTTRIRSYAMMMAKLLNPK----------CEYHISSRLITRED-FKE----KGKKSGD 125 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~yei~i~T~~~~~Ya~~v~~~ldp~----------~~~f~~~rv~~r~~-~~~----~~~KdL~ 125 (282)
+...||+.++|+. .+.++|.|++.+..+..+++..... ..+| ..+|...- ..+ .+.+-++
T Consensus 124 ~~~~pgv~e~L~~---g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~--~~~f~~~~~g~KP~p~~~~~a~~ 198 (253)
T 2g80_A 124 APVYADAIDFIKR---KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYI--DGYFDINTSGKKTETQSYANILR 198 (253)
T ss_dssp BCCCHHHHHHHHH---CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGC--CEEECHHHHCCTTCHHHHHHHHH
T ss_pred CCCCCCHHHHHHc---CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhc--ceEEeeeccCCCCCHHHHHHHHH
Confidence 5678999999999 7999999999999999998876211 1234 23332211 111 2344455
Q ss_pred cccccCCceEEEcCChhh
Q 041003 126 LVLRQEWGVVIVDDTEKV 143 (282)
Q Consensus 126 ~l~~~~~~vvivDd~~~~ 143 (282)
+++-+++++++|+|++.-
T Consensus 199 ~lg~~p~~~l~vgDs~~d 216 (253)
T 2g80_A 199 DIGAKASEVLFLSDNPLE 216 (253)
T ss_dssp HHTCCGGGEEEEESCHHH
T ss_pred HcCCCcccEEEEcCCHHH
Confidence 666678999999999843
No 168
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=91.03 E-value=0.27 Score=40.57 Aligned_cols=40 Identities=8% Similarity=-0.086 Sum_probs=36.0
Q ss_pred EecccHHHHHHHHhc-CceEEEEcCCcHHHHHHHHhhhcCC
Q 041003 62 KVRSYIRKFLKKASK-MYDIYLCTTRIRSYAMMMAKLLNPK 101 (282)
Q Consensus 62 ~~RP~l~~FL~~~~~-~yei~i~T~~~~~Ya~~v~~~ldp~ 101 (282)
.++||+.++|+.+.+ .+.++|.|++.+.+++.+++.+.-.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~ 132 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ 132 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 469999999999975 5999999999999999999998755
No 169
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=90.94 E-value=0.13 Score=43.92 Aligned_cols=16 Identities=25% Similarity=0.272 Sum_probs=13.4
Q ss_pred CeeEEEeCCCceeeee
Q 041003 11 KLHLVLDLDQTLPHAV 26 (282)
Q Consensus 11 kl~LVLDLD~TLihs~ 26 (282)
...+++||||||+.+.
T Consensus 5 ~kli~~DlDGTLl~~~ 20 (264)
T 3epr_A 5 YKGYLIDLDGTIYKGK 20 (264)
T ss_dssp CCEEEECCBTTTEETT
T ss_pred CCEEEEeCCCceEeCC
Confidence 4578999999999874
No 170
>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*
Probab=90.65 E-value=0.34 Score=41.49 Aligned_cols=17 Identities=29% Similarity=0.436 Sum_probs=13.6
Q ss_pred CCeeEEEeCCCceeeee
Q 041003 10 KKLHLVLDLDQTLPHAV 26 (282)
Q Consensus 10 ~kl~LVLDLD~TLihs~ 26 (282)
+...+++||||||+.+.
T Consensus 12 ~~kli~~DlDGTLl~~~ 28 (262)
T 2fue_A 12 ERVLCLFDVDGTLTPAR 28 (262)
T ss_dssp -CEEEEEESBTTTBSTT
T ss_pred CeEEEEEeCccCCCCCC
Confidence 45678999999999863
No 171
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=90.47 E-value=0.47 Score=40.20 Aligned_cols=15 Identities=20% Similarity=0.439 Sum_probs=12.7
Q ss_pred CeeEEEeCCCceeee
Q 041003 11 KLHLVLDLDQTLPHA 25 (282)
Q Consensus 11 kl~LVLDLD~TLihs 25 (282)
...+++||||||+.+
T Consensus 8 ~kli~~DlDGTLl~~ 22 (268)
T 3qgm_A 8 KKGYIIDIDGVIGKS 22 (268)
T ss_dssp CSEEEEECBTTTEET
T ss_pred CCEEEEcCcCcEECC
Confidence 357899999999975
No 172
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=90.20 E-value=0.21 Score=42.15 Aligned_cols=80 Identities=15% Similarity=0.008 Sum_probs=55.0
Q ss_pred EEecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC--C----ceeccccccccC-C
Q 041003 61 VKVRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE--K----GKKSGDLVLRQE-W 132 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~--~----~~KdL~~l~~~~-~ 132 (282)
....||+.++|+.+.+. +.+.|.|++.+.++..+++.++....+| +.+++.+++.. + +.+=++.++-+. +
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~ 179 (267)
T 1swv_A 102 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKP--DFLVTPDDVPAGRPYPWMCYKNAMELGVYPMN 179 (267)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCC--SCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGG
T ss_pred cccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccCh--HheecCCccCCCCCCHHHHHHHHHHhCCCCCc
Confidence 45679999999999754 9999999999999999998875443222 44455554432 1 112223345566 8
Q ss_pred ceEEEcCChh
Q 041003 133 GVVIVDDTEK 142 (282)
Q Consensus 133 ~vvivDd~~~ 142 (282)
.++.|.|+..
T Consensus 180 ~~i~iGD~~n 189 (267)
T 1swv_A 180 HMIKVGDTVS 189 (267)
T ss_dssp GEEEEESSHH
T ss_pred CEEEEeCCHH
Confidence 9999999983
No 173
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=90.11 E-value=0.39 Score=38.57 Aligned_cols=79 Identities=11% Similarity=0.118 Sum_probs=53.8
Q ss_pred ecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCC-CcccccccEEE-ccCC------C----CCceeccccc-c
Q 041003 63 VRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPK-CEYHISSRLIT-REDF------K----EKGKKSGDLV-L 128 (282)
Q Consensus 63 ~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~-~~~f~~~rv~~-r~~~------~----~~~~KdL~~l-~ 128 (282)
.+||+.++|+.+.+. +.++|.|++...++..+++.++-. ..+| ...+.. .+.+ . ....+-+... +
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 161 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIF-AVETIWNSDGSFKELDNSNGACDSKLSAFDKAKG 161 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEE-EEEEEECTTSBEEEEECTTSTTTCHHHHHHHHGG
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEE-EeeeeecCCCceeccCCCCCCcccHHHHHHHHhC
Confidence 789999999999765 999999999999999999998654 2244 222222 2211 1 1222334333 4
Q ss_pred ccCCceEEEcCChh
Q 041003 129 RQEWGVVIVDDTEK 142 (282)
Q Consensus 129 ~~~~~vvivDd~~~ 142 (282)
-+++++++|.|+..
T Consensus 162 ~~~~~~~~vGD~~~ 175 (219)
T 3kd3_A 162 LIDGEVIAIGDGYT 175 (219)
T ss_dssp GCCSEEEEEESSHH
T ss_pred CCCCCEEEEECCHh
Confidence 47788999999874
No 174
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=90.01 E-value=0.29 Score=41.47 Aligned_cols=53 Identities=21% Similarity=0.233 Sum_probs=33.9
Q ss_pred eeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHhcCceEEEEcCCcHHHH
Q 041003 12 LHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKASKMYDIYLCTTRIRSYA 91 (282)
Q Consensus 12 l~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~~~yei~i~T~~~~~Ya 91 (282)
..+++||||||+.+... . |...+.|+++.+...+++-|.-....+
T Consensus 4 ~li~~DlDGTLl~~~~~----------------------------------~-~~~~~~l~~~~~gi~v~iaTGR~~~~~ 48 (244)
T 1s2o_A 4 LLLISDLDNTWVGDQQA----------------------------------L-EHLQEYLGDRRGNFYLAYATGRSYHSA 48 (244)
T ss_dssp EEEEECTBTTTBSCHHH----------------------------------H-HHHHHHHHTTGGGEEEEEECSSCHHHH
T ss_pred eEEEEeCCCCCcCCHHH----------------------------------H-HHHHHHHHHhcCCCEEEEEcCCCHHHH
Confidence 47899999999985310 0 223455555555566677776666666
Q ss_pred HHHHhhhc
Q 041003 92 MMMAKLLN 99 (282)
Q Consensus 92 ~~v~~~ld 99 (282)
..+++.+.
T Consensus 49 ~~~~~~l~ 56 (244)
T 1s2o_A 49 RELQKQVG 56 (244)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHcC
Confidence 66766643
No 175
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=90.00 E-value=0.22 Score=40.65 Aligned_cols=78 Identities=17% Similarity=0.179 Sum_probs=55.7
Q ss_pred EEecccHHHHHHHHhcCceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCCC--------ceeccccccccCC
Q 041003 61 VKVRSYIRKFLKKASKMYDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKEK--------GKKSGDLVLRQEW 132 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~~--------~~KdL~~l~~~~~ 132 (282)
+...|++.++|+.+.. .++|.|++.+.++..+++.++-.. +| .+.+++.++.... +.+=++.++-+++
T Consensus 86 ~~~~~~~~~~l~~l~~--~~~i~s~~~~~~~~~~l~~~~l~~-~~-~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~~~~ 161 (229)
T 2fdr_A 86 VKIIDGVKFALSRLTT--PRCICSNSSSHRLDMMLTKVGLKP-YF-APHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPD 161 (229)
T ss_dssp CCBCTTHHHHHHHCCS--CEEEEESSCHHHHHHHHHHTTCGG-GT-TTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGG
T ss_pred CccCcCHHHHHHHhCC--CEEEEECCChhHHHHHHHhCChHH-hc-cceEEeccccccCCCCcCHHHHHHHHHHcCCChh
Confidence 4578999999999876 899999999999999999885443 34 3556665542211 1122334455788
Q ss_pred ceEEEcCChh
Q 041003 133 GVVIVDDTEK 142 (282)
Q Consensus 133 ~vvivDd~~~ 142 (282)
+++.|+|+..
T Consensus 162 ~~i~iGD~~~ 171 (229)
T 2fdr_A 162 RVVVVEDSVH 171 (229)
T ss_dssp GEEEEESSHH
T ss_pred HeEEEcCCHH
Confidence 9999999984
No 176
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=89.94 E-value=0.23 Score=42.01 Aligned_cols=57 Identities=18% Similarity=0.144 Sum_probs=35.5
Q ss_pred eEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHhcCceEEEEcCCcHHHHH
Q 041003 13 HLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKASKMYDIYLCTTRIRSYAM 92 (282)
Q Consensus 13 ~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~~~yei~i~T~~~~~Ya~ 92 (282)
.+++||||||+.....+... ..-|...+.|+++.+.-.++|-|.-....+.
T Consensus 3 li~~DlDGTLl~~~~~~~~~-----------------------------~i~~~~~~al~~l~~~g~v~iaTGR~~~~~~ 53 (239)
T 1u02_A 3 LIFLDYDGTLVPIIMNPEES-----------------------------YADAGLLSLISDLKERFDTYIVTGRSPEEIS 53 (239)
T ss_dssp EEEEECBTTTBCCCSCGGGC-----------------------------CCCHHHHHHHHHHHHHSEEEEECSSCHHHHH
T ss_pred EEEEecCCCCcCCCCCcccC-----------------------------CCCHHHHHHHHHHhcCCCEEEEeCCCHHHHH
Confidence 57999999999864211000 1345677778777643366666666666666
Q ss_pred HHHhhh
Q 041003 93 MMAKLL 98 (282)
Q Consensus 93 ~v~~~l 98 (282)
.+++.+
T Consensus 54 ~~~~~l 59 (239)
T 1u02_A 54 RFLPLD 59 (239)
T ss_dssp HHSCSS
T ss_pred HHhccc
Confidence 665544
No 177
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=89.93 E-value=0.097 Score=42.96 Aligned_cols=73 Identities=15% Similarity=0.100 Sum_probs=51.1
Q ss_pred EEecccHHHHHHHHhcCceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC------CceeccccccccCCce
Q 041003 61 VKVRSYIRKFLKKASKMYDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE------KGKKSGDLVLRQEWGV 134 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~------~~~KdL~~l~~~~~~v 134 (282)
+...||+.++|+.+.+.+.++|.|++... ++.+.-. .+| +.+++.+++.. .+.+-++.++-+++++
T Consensus 104 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~-----l~~~~l~-~~f--~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 175 (230)
T 3vay_A 104 VQIFPEVQPTLEILAKTFTLGVITNGNAD-----VRRLGLA-DYF--AFALCAEDLGIGKPDPAPFLEALRRAKVDASAA 175 (230)
T ss_dssp CCBCTTHHHHHHHHHTTSEEEEEESSCCC-----GGGSTTG-GGC--SEEEEHHHHTCCTTSHHHHHHHHHHHTCCGGGE
T ss_pred CccCcCHHHHHHHHHhCCeEEEEECCchh-----hhhcCcH-HHe--eeeEEccccCCCCcCHHHHHHHHHHhCCCchhe
Confidence 45889999999999877999999999876 3333322 356 56676655432 1223334455688999
Q ss_pred EEEcCCh
Q 041003 135 VIVDDTE 141 (282)
Q Consensus 135 vivDd~~ 141 (282)
++|+|+.
T Consensus 176 ~~vGD~~ 182 (230)
T 3vay_A 176 VHVGDHP 182 (230)
T ss_dssp EEEESCT
T ss_pred EEEeCCh
Confidence 9999996
No 178
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=89.32 E-value=0.59 Score=39.36 Aligned_cols=16 Identities=25% Similarity=0.289 Sum_probs=13.7
Q ss_pred CCeeEEEeCCCceeee
Q 041003 10 KKLHLVLDLDQTLPHA 25 (282)
Q Consensus 10 ~kl~LVLDLD~TLihs 25 (282)
++..+++||||||+.+
T Consensus 5 ~~kli~~DlDGTLl~~ 20 (246)
T 2amy_A 5 GPALCLFDVDGTLTAP 20 (246)
T ss_dssp CSEEEEEESBTTTBCT
T ss_pred CceEEEEECCCCcCCC
Confidence 4568899999999976
No 179
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=89.11 E-value=0.25 Score=39.92 Aligned_cols=77 Identities=13% Similarity=0.105 Sum_probs=52.5
Q ss_pred EEecccHHHHHHHHhc-CceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCC--C----ceeccccccccCCc
Q 041003 61 VKVRSYIRKFLKKASK-MYDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKE--K----GKKSGDLVLRQEWG 133 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~-~yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~--~----~~KdL~~l~~~~~~ 133 (282)
....|++.++|+.+.+ .+.+.+.|++ ..+..+++.++-.. +| +.+++.++... + +.+=++.++-++++
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~-~f--~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~ 164 (221)
T 2wf7_A 90 ADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTG-YF--DAIADPAEVAASKPAPDIFIAAAHAVGVAPSE 164 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGG-GC--SEECCTTTSSSCTTSSHHHHHHHHHTTCCGGG
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHH-Hc--ceEeccccCCCCCCChHHHHHHHHHcCCChhH
Confidence 3467999999999976 4999999998 56677777765433 45 44555554432 1 11223445557889
Q ss_pred eEEEcCChh
Q 041003 134 VVIVDDTEK 142 (282)
Q Consensus 134 vvivDd~~~ 142 (282)
++.|+|++.
T Consensus 165 ~i~iGD~~n 173 (221)
T 2wf7_A 165 SIGLEDSQA 173 (221)
T ss_dssp EEEEESSHH
T ss_pred eEEEeCCHH
Confidence 999999974
No 180
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=88.80 E-value=0.54 Score=39.86 Aligned_cols=35 Identities=11% Similarity=0.216 Sum_probs=25.7
Q ss_pred HHHHHHHHh-cCceEEEEcCCcHHHHHHHHhhhcCC
Q 041003 67 IRKFLKKAS-KMYDIYLCTTRIRSYAMMMAKLLNPK 101 (282)
Q Consensus 67 l~~FL~~~~-~~yei~i~T~~~~~Ya~~v~~~ldp~ 101 (282)
..+.|+++. +-..++|.|.-....+..+++.+...
T Consensus 22 ~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~ 57 (249)
T 2zos_A 22 AKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (249)
T ss_dssp GHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 456677775 45788888888788888888887654
No 181
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=88.71 E-value=0.27 Score=41.76 Aligned_cols=17 Identities=41% Similarity=0.448 Sum_probs=14.2
Q ss_pred CeeEEEeCCCceeeeec
Q 041003 11 KLHLVLDLDQTLPHAVD 27 (282)
Q Consensus 11 kl~LVLDLD~TLihs~~ 27 (282)
...+++||||||+.+..
T Consensus 5 ~kli~fDlDGTLl~~~~ 21 (274)
T 3fzq_A 5 YKLLILDIDGTLRDEVY 21 (274)
T ss_dssp CCEEEECSBTTTBBTTT
T ss_pred ceEEEEECCCCCCCCCC
Confidence 35789999999998854
No 182
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=88.66 E-value=0.71 Score=39.10 Aligned_cols=14 Identities=29% Similarity=0.354 Sum_probs=12.4
Q ss_pred eeEEEeCCCceeee
Q 041003 12 LHLVLDLDQTLPHA 25 (282)
Q Consensus 12 l~LVLDLD~TLihs 25 (282)
..+++||||||+.+
T Consensus 18 ~~v~~DlDGTLl~~ 31 (271)
T 1vjr_A 18 ELFILDMDGTFYLD 31 (271)
T ss_dssp CEEEECCBTTTEET
T ss_pred CEEEEcCcCcEEeC
Confidence 46899999999987
No 183
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=88.21 E-value=0.53 Score=41.32 Aligned_cols=54 Identities=26% Similarity=0.187 Sum_probs=36.3
Q ss_pred eeEEEeCCCceeee-eccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHhc-CceEEEEcCCcHH
Q 041003 12 LHLVLDLDQTLPHA-VDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKASK-MYDIYLCTTRIRS 89 (282)
Q Consensus 12 l~LVLDLD~TLihs-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~~-~yei~i~T~~~~~ 89 (282)
..+++||||||+.+ ... +-|...+.|+++.+ -..+++.|.-...
T Consensus 28 kli~~DlDGTLl~~~~~~----------------------------------is~~~~~al~~l~~~Gi~v~iaTGR~~~ 73 (301)
T 2b30_A 28 KLLLIDFDGTLFVDKDIK----------------------------------VPSENIDAIKEAIEKGYMVSICTGRSKV 73 (301)
T ss_dssp CEEEEETBTTTBCCTTTC----------------------------------SCHHHHHHHHHHHHHTCEEEEECSSCHH
T ss_pred cEEEEECCCCCcCCCCCc----------------------------------cCHHHHHHHHHHHHCCCEEEEEcCCCHH
Confidence 47899999999986 321 12445566666654 4677777777776
Q ss_pred HHHHHH--hhhc
Q 041003 90 YAMMMA--KLLN 99 (282)
Q Consensus 90 Ya~~v~--~~ld 99 (282)
-+..++ +.+.
T Consensus 74 ~~~~~~~~~~l~ 85 (301)
T 2b30_A 74 GILSAFGEENLK 85 (301)
T ss_dssp HHHHHHCHHHHH
T ss_pred HHHHHhhHHhhc
Confidence 677777 6554
No 184
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=88.18 E-value=0.24 Score=42.06 Aligned_cols=46 Identities=9% Similarity=-0.031 Sum_probs=26.0
Q ss_pred cchhHHHHHHHHhCCeEecccCCCccEEEEcCCCCCcHHHHHHHHCCCceecHHH
Q 041003 209 FEFPLLKWRAGELGAACTDVYNLSVAQVVSVSSRLGIKGHRLAEQHNKFLVHPQW 263 (282)
Q Consensus 209 ~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~~~t~K~~~A~~~gi~IV~~~W 263 (282)
|....+..+++.+|..- ..+++-+|+.. .-...|...|+..|...|
T Consensus 184 p~~~~~~~~~~~lgi~~--------~~~~~iGD~~~-~Di~~~~~aG~~~~~v~~ 229 (266)
T 3pdw_A 184 PESIIMEQAMRVLGTDV--------SETLMVGDNYA-TDIMAGINAGMDTLLVHT 229 (266)
T ss_dssp TSSHHHHHHHHHHTCCG--------GGEEEEESCTT-THHHHHHHHTCEEEEECC
T ss_pred CCHHHHHHHHHHcCCCh--------hhEEEECCCcH-HHHHHHHHCCCeEEEECC
Confidence 44567788888887532 23444422212 335566667876665555
No 185
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=88.14 E-value=0.4 Score=40.82 Aligned_cols=14 Identities=21% Similarity=0.527 Sum_probs=11.9
Q ss_pred eeEEEeCCCceeee
Q 041003 12 LHLVLDLDQTLPHA 25 (282)
Q Consensus 12 l~LVLDLD~TLihs 25 (282)
..+++||||||++.
T Consensus 2 k~i~~D~DGtL~~~ 15 (263)
T 1zjj_A 2 VAIIFDMDGVLYRG 15 (263)
T ss_dssp EEEEEECBTTTEET
T ss_pred eEEEEeCcCceEeC
Confidence 36899999999974
No 186
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=87.72 E-value=0.23 Score=39.89 Aligned_cols=41 Identities=7% Similarity=0.030 Sum_probs=34.4
Q ss_pred EEecccHHHHHHHHhc-CceEEEEcCCcHHHHHHHHhhhcCC
Q 041003 61 VKVRSYIRKFLKKASK-MYDIYLCTTRIRSYAMMMAKLLNPK 101 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~-~yei~i~T~~~~~Ya~~v~~~ldp~ 101 (282)
..+.|++.++|+.+.+ .+.++|+|++...++..+++.+...
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~ 116 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLD 116 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCS
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCC
Confidence 3567999999999975 4899999999999998888887654
No 187
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=87.34 E-value=0.72 Score=39.30 Aligned_cols=16 Identities=31% Similarity=0.509 Sum_probs=13.5
Q ss_pred CeeEEEeCCCceeeee
Q 041003 11 KLHLVLDLDQTLPHAV 26 (282)
Q Consensus 11 kl~LVLDLD~TLihs~ 26 (282)
...+++||||||+.+.
T Consensus 4 ~kli~~DlDGTLl~~~ 19 (246)
T 3f9r_A 4 RVLLLFDVDGTLTPPR 19 (246)
T ss_dssp SEEEEECSBTTTBSTT
T ss_pred ceEEEEeCcCCcCCCC
Confidence 4678999999999864
No 188
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=87.31 E-value=1 Score=38.60 Aligned_cols=45 Identities=13% Similarity=0.072 Sum_probs=30.7
Q ss_pred chhcCCCeeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHh-cCceEEEE
Q 041003 5 MVYRQKKLHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKAS-KMYDIYLC 83 (282)
Q Consensus 5 ~l~~~~kl~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~-~~yei~i~ 83 (282)
.++..- ..+++||||||+.... .-|+..++|+.+. +...+++.
T Consensus 9 ~~~~~~-k~i~~D~DGtL~~~~~-----------------------------------~~~~~~~~l~~l~~~g~~~~~~ 52 (284)
T 2hx1_A 9 SLLPKY-KCIFFDAFGVLKTYNG-----------------------------------LLPGIENTFDYLKAQGQDYYIV 52 (284)
T ss_dssp HHGGGC-SEEEECSBTTTEETTE-----------------------------------ECTTHHHHHHHHHHTTCEEEEE
T ss_pred HHHhcC-CEEEEcCcCCcCcCCe-----------------------------------eChhHHHHHHHHHHCCCEEEEE
Confidence 344444 4689999999998521 1266777777775 45778888
Q ss_pred cC
Q 041003 84 TT 85 (282)
Q Consensus 84 T~ 85 (282)
|+
T Consensus 53 Tn 54 (284)
T 2hx1_A 53 TN 54 (284)
T ss_dssp EC
T ss_pred eC
Confidence 86
No 189
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=87.16 E-value=0.71 Score=38.55 Aligned_cols=17 Identities=24% Similarity=0.204 Sum_probs=12.2
Q ss_pred CeeEEEeCCCceeeeec
Q 041003 11 KLHLVLDLDQTLPHAVD 27 (282)
Q Consensus 11 kl~LVLDLD~TLihs~~ 27 (282)
-..+++||||||+.+..
T Consensus 7 ik~i~fDlDGTLld~~~ 23 (259)
T 2ho4_A 7 LKAVLVDLNGTLHIEDA 23 (259)
T ss_dssp CCEEEEESSSSSCC---
T ss_pred CCEEEEeCcCcEEeCCE
Confidence 34789999999998643
No 190
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=87.02 E-value=0.12 Score=44.66 Aligned_cols=73 Identities=18% Similarity=0.175 Sum_probs=53.7
Q ss_pred EEecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCCCcccccccEEEccCCCCCceeccccccccCCceEEEcC
Q 041003 61 VKVRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRLITREDFKEKGKKSGDLVLRQEWGVVIVDD 139 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv~~r~~~~~~~~KdL~~l~~~~~~vvivDd 139 (282)
..++||+.++|+.+.+. +.++|.|++.+..+..+++.+.-.. +| ..++ .+ ...+-++.+....+.+++|.|
T Consensus 135 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-~f--~~~~-p~----~k~~~~~~l~~~~~~~~~VGD 206 (263)
T 2yj3_A 135 DVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE-YY--SNLS-PE----DKVRIIEKLKQNGNKVLMIGD 206 (263)
Confidence 35899999999999865 9999999999999999999886543 45 3333 11 122334445556678999999
Q ss_pred Ch
Q 041003 140 TE 141 (282)
Q Consensus 140 ~~ 141 (282)
..
T Consensus 207 ~~ 208 (263)
T 2yj3_A 207 GV 208 (263)
Confidence 86
No 191
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=87.04 E-value=0.93 Score=38.97 Aligned_cols=62 Identities=11% Similarity=-0.015 Sum_probs=36.1
Q ss_pred CCeeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHh--cCceEEEEcCCc
Q 041003 10 KKLHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKAS--KMYDIYLCTTRI 87 (282)
Q Consensus 10 ~kl~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~--~~yei~i~T~~~ 87 (282)
....+++||||||+.+.. .+.....+ ..+.+.|+.+. +...+++.|...
T Consensus 21 ~~kliifDlDGTLlds~i----~~~~~~~l-------------------------~~~~~~l~~~~~~~g~~~~~~tGr~ 71 (289)
T 3gyg_A 21 PQYIVFCDFDETYFPHTI----DEQKQQDI-------------------------YELEDYLEQKSKDGELIIGWVTGSS 71 (289)
T ss_dssp CSEEEEEETBTTTBCSSC----CHHHHHHH-------------------------HHHHHHHHHHHHTTCEEEEEECSSC
T ss_pred CCeEEEEECCCCCcCCCC----CcchHHHH-------------------------HHHHHHHHHHHhcCCcEEEEEcCCC
Confidence 456899999999999751 21111110 01123334342 446677777666
Q ss_pred HHHHHHHHhhhcC
Q 041003 88 RSYAMMMAKLLNP 100 (282)
Q Consensus 88 ~~Ya~~v~~~ldp 100 (282)
..-+..+++.+.+
T Consensus 72 ~~~~~~~~~~~g~ 84 (289)
T 3gyg_A 72 IESILDKMGRGKF 84 (289)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHhhcc
Confidence 6667777777654
No 192
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=86.56 E-value=0.42 Score=41.70 Aligned_cols=17 Identities=18% Similarity=0.196 Sum_probs=14.0
Q ss_pred CeeEEEeCCCceeeeec
Q 041003 11 KLHLVLDLDQTLPHAVD 27 (282)
Q Consensus 11 kl~LVLDLD~TLihs~~ 27 (282)
...+++||||||+.+..
T Consensus 37 iKli~fDlDGTLld~~~ 53 (304)
T 3l7y_A 37 VKVIATDMDGTFLNSKG 53 (304)
T ss_dssp CSEEEECCCCCCSCTTS
T ss_pred eEEEEEeCCCCCCCCCC
Confidence 35789999999998753
No 193
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=86.15 E-value=0.44 Score=40.80 Aligned_cols=15 Identities=27% Similarity=0.339 Sum_probs=12.8
Q ss_pred eeEEEeCCCceeeee
Q 041003 12 LHLVLDLDQTLPHAV 26 (282)
Q Consensus 12 l~LVLDLD~TLihs~ 26 (282)
..+++||||||+.+.
T Consensus 4 kli~~DlDGTLl~~~ 18 (271)
T 1rlm_A 4 KVIVTDMDGTFLNDA 18 (271)
T ss_dssp CEEEECCCCCCSCTT
T ss_pred cEEEEeCCCCCCCCC
Confidence 468999999999864
No 194
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=85.57 E-value=0.68 Score=39.09 Aligned_cols=16 Identities=25% Similarity=0.231 Sum_probs=13.5
Q ss_pred CeeEEEeCCCceeeee
Q 041003 11 KLHLVLDLDQTLPHAV 26 (282)
Q Consensus 11 kl~LVLDLD~TLihs~ 26 (282)
...+++||||||+.+.
T Consensus 5 ~k~v~fDlDGTL~~~~ 20 (264)
T 1yv9_A 5 YQGYLIDLDGTIYLGK 20 (264)
T ss_dssp CCEEEECCBTTTEETT
T ss_pred CCEEEEeCCCeEEeCC
Confidence 4578999999999864
No 195
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=84.93 E-value=0.31 Score=39.62 Aligned_cols=39 Identities=13% Similarity=0.237 Sum_probs=33.2
Q ss_pred EEecccHHHHHHHHhc--CceEEEEcCCcHHHHHHHHhhhc
Q 041003 61 VKVRSYIRKFLKKASK--MYDIYLCTTRIRSYAMMMAKLLN 99 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~--~yei~i~T~~~~~Ya~~v~~~ld 99 (282)
+...||+.++|+.+.+ .+.+.|.|++.+.++..+++.++
T Consensus 74 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~ 114 (197)
T 1q92_A 74 LEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYA 114 (197)
T ss_dssp CCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHH
T ss_pred CCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhc
Confidence 5678999999999986 59999999999988877776653
No 196
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=84.52 E-value=0.86 Score=39.70 Aligned_cols=44 Identities=11% Similarity=0.118 Sum_probs=29.4
Q ss_pred hhcCCCeeEEEeCCCceeeeeccCccchhhHHhhhhhcCCCCCCcceeecceeEEEEecccHHHHHHHHh-cCceEEEEc
Q 041003 6 VYRQKKLHLVLDLDQTLPHAVDIDILASKDRKYLMKQRGSSSDGDLFKMASELFLVKVRSYIRKFLKKAS-KMYDIYLCT 84 (282)
Q Consensus 6 l~~~~kl~LVLDLD~TLihs~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~RP~l~~FL~~~~-~~yei~i~T 84 (282)
++..-| .+++|+||||+.... .-|+..++|+.+. +...+++.|
T Consensus 17 ~~~~~k-~i~~D~DGTL~~~~~-----------------------------------~~~~~~~~l~~l~~~g~~~~~~T 60 (306)
T 2oyc_A 17 VLGRAQ-GVLFDCDGVLWNGER-----------------------------------AVPGAPELLERLARAGKAALFVS 60 (306)
T ss_dssp HHHHCS-EEEECSBTTTEETTE-----------------------------------ECTTHHHHHHHHHHTTCEEEEEE
T ss_pred HHhhCC-EEEECCCCcEecCCc-----------------------------------cCcCHHHHHHHHHHCCCeEEEEE
Confidence 344444 689999999986421 2356777777775 457777777
Q ss_pred C
Q 041003 85 T 85 (282)
Q Consensus 85 ~ 85 (282)
+
T Consensus 61 n 61 (306)
T 2oyc_A 61 N 61 (306)
T ss_dssp C
T ss_pred C
Confidence 4
No 197
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=82.15 E-value=1 Score=39.83 Aligned_cols=80 Identities=9% Similarity=0.094 Sum_probs=54.5
Q ss_pred EEecccHHHHHHHHhcC-ceEEEEcCCcHHHHHHHHhhhcCCCcccccccE------EEc---cCCCC------Cceecc
Q 041003 61 VKVRSYIRKFLKKASKM-YDIYLCTTRIRSYAMMMAKLLNPKCEYHISSRL------ITR---EDFKE------KGKKSG 124 (282)
Q Consensus 61 v~~RP~l~~FL~~~~~~-yei~i~T~~~~~Ya~~v~~~ldp~~~~f~~~rv------~~r---~~~~~------~~~KdL 124 (282)
+..+||+.++|+.+.+. +.++|.|++...+++.+++.+.-.. +| ...+ ++. ++... .+.+=+
T Consensus 177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~-~~-~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~ 254 (335)
T 3n28_A 177 LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDY-AQ-SNTLEIVSGKLTGQVLGEVVSAQTKADILLTLA 254 (335)
T ss_dssp CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSE-EE-EEEEEEETTEEEEEEESCCCCHHHHHHHHHHHH
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCe-EE-eeeeEeeCCeeeeeecccccChhhhHHHHHHHH
Confidence 45899999999999864 9999999999999999999987653 44 2221 110 11111 111122
Q ss_pred ccccccCCceEEEcCChh
Q 041003 125 DLVLRQEWGVVIVDDTEK 142 (282)
Q Consensus 125 ~~l~~~~~~vvivDd~~~ 142 (282)
+.++-+++.+++|+|+..
T Consensus 255 ~~lgi~~~~~v~vGDs~n 272 (335)
T 3n28_A 255 QQYDVEIHNTVAVGDGAN 272 (335)
T ss_dssp HHHTCCGGGEEEEECSGG
T ss_pred HHcCCChhhEEEEeCCHH
Confidence 334457789999999974
No 198
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=82.04 E-value=0.44 Score=40.49 Aligned_cols=16 Identities=31% Similarity=0.308 Sum_probs=13.2
Q ss_pred eeEEEeCCCceeeeec
Q 041003 12 LHLVLDLDQTLPHAVD 27 (282)
Q Consensus 12 l~LVLDLD~TLihs~~ 27 (282)
..+++||||||+.+..
T Consensus 3 kli~~DlDGTLl~~~~ 18 (261)
T 2rbk_A 3 KALFFDIDGTLVSFET 18 (261)
T ss_dssp CEEEECSBTTTBCTTT
T ss_pred cEEEEeCCCCCcCCCC
Confidence 3689999999998753
No 199
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=81.62 E-value=0.61 Score=38.00 Aligned_cols=17 Identities=24% Similarity=0.389 Sum_probs=14.3
Q ss_pred CeeEEEeCCCceeeeec
Q 041003 11 KLHLVLDLDQTLPHAVD 27 (282)
Q Consensus 11 kl~LVLDLD~TLihs~~ 27 (282)
...+++||||||+.+..
T Consensus 4 ~k~iifDlDGTL~d~~~ 20 (234)
T 2hcf_A 4 RTLVLFDIDGTLLKVES 20 (234)
T ss_dssp CEEEEECCBTTTEEECT
T ss_pred ceEEEEcCCCCcccCcc
Confidence 35789999999999864
No 200
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=81.25 E-value=1.1 Score=37.74 Aligned_cols=15 Identities=40% Similarity=0.346 Sum_probs=12.9
Q ss_pred CeeEEEeCCCceeee
Q 041003 11 KLHLVLDLDQTLPHA 25 (282)
Q Consensus 11 kl~LVLDLD~TLihs 25 (282)
...+++||||||+.+
T Consensus 12 iKli~~DlDGTLl~~ 26 (268)
T 3r4c_A 12 IKVLLLDVDGTLLSF 26 (268)
T ss_dssp CCEEEECSBTTTBCT
T ss_pred eEEEEEeCCCCCcCC
Confidence 457899999999984
No 201
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=81.18 E-value=0.54 Score=38.94 Aligned_cols=18 Identities=22% Similarity=0.337 Sum_probs=15.0
Q ss_pred CCeeEEEeCCCceeeeec
Q 041003 10 KKLHLVLDLDQTLPHAVD 27 (282)
Q Consensus 10 ~kl~LVLDLD~TLihs~~ 27 (282)
....+++||||||+.+..
T Consensus 10 ~~k~viFDlDGTL~ds~~ 27 (231)
T 2p11_A 10 HDIVFLFDCDNTLLDNDH 27 (231)
T ss_dssp CSEEEEECCBTTTBCHHH
T ss_pred CCeEEEEcCCCCCEecHH
Confidence 445899999999999864
No 202
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=80.87 E-value=0.6 Score=37.59 Aligned_cols=16 Identities=25% Similarity=0.360 Sum_probs=13.7
Q ss_pred eeEEEeCCCceeeeec
Q 041003 12 LHLVLDLDQTLPHAVD 27 (282)
Q Consensus 12 l~LVLDLD~TLihs~~ 27 (282)
..+++|+||||+++..
T Consensus 7 k~v~fDlDGTL~d~~~ 22 (225)
T 3d6j_A 7 TVYLFDFDYTLADSSR 22 (225)
T ss_dssp SEEEECCBTTTEECHH
T ss_pred CEEEEeCCCCCCCCHH
Confidence 5789999999998753
No 203
>3t7k_A RTT107, regulator of TY1 transposition protein 107; BRCT, DNA repair, phospho-peptide, protein binding; HET: SEP; 2.03A {Saccharomyces cerevisiae} PDB: 3t7j_A* 3t7i_A
Probab=80.65 E-value=3.1 Score=35.84 Aligned_cols=84 Identities=12% Similarity=0.169 Sum_probs=52.6
Q ss_pred cchhheeeccee---EEeeccCCCCccchhHHHHHHHHhCCeEeccc-----CC---------------CccEEEEcCCC
Q 041003 186 GKIQRQILVRCT---LFFSRDVDDKEFEFPLLKWRAGELGAACTDVY-----NL---------------SVAQVVSVSSR 242 (282)
Q Consensus 186 ~~~r~~vl~G~~---i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~~~~-----~~---------------~vTHlV~~~~~ 242 (282)
.+.++++|.|.. |.++.-+|++ ...+...++.+||+=...+ +. ...+++.+...
T Consensus 129 ~~~~gkLf~~~~I~ciNls~dI~GG---~e~issIleahG~~~~~~l~~~~~~~~dl~~n~~~~~~~~~~~~~ILia~K~ 205 (256)
T 3t7k_A 129 TKLPTKVFERANIRCINLVNDIPGG---VDTIGSVLKAHGIEKINVLRSKKCTFEDIIPNDVSKQENGGIFKYVLIVTKA 205 (256)
T ss_dssp TTSSSCHHHHTTCCEEEEETTCTTC---HHHHHHHHHHTTCCEEEEECTTTCCGGGCCCCC--------CCSEEEECSCH
T ss_pred hccccccccCCcceeeeeccCCCCC---HHHHHHHHHHcCCceeeecccccccHHHhhhccccccccCCCCCEEEEEccH
Confidence 445678999995 4447778888 5778999999999633322 21 23455555211
Q ss_pred CCcHHHHHHHH-----CCCceecHHHHHHHHHhCC
Q 041003 243 LGIKGHRLAEQ-----HNKFLVHPQWIYAAYYLWS 272 (282)
Q Consensus 243 ~~t~K~~~A~~-----~gi~IV~~~WL~~c~~~~~ 272 (282)
..+.+++...+ ..+-+|..+|.-.|+...+
T Consensus 206 ~q~k~Fkk~~~~~~~n~~~lvveWdWCVksIF~le 240 (256)
T 3t7k_A 206 SQVKKFTKLINDRDKNETILIVEWNWCVESIFHLN 240 (256)
T ss_dssp HHHHHHHHHHHHHSTTSCEEEECHHHHHHHHHTTS
T ss_pred HHHHHHHHHhhcccccceEEEEEcHHHHHHHhhee
Confidence 11222332221 2478999999999987543
No 204
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=80.07 E-value=0.56 Score=37.03 Aligned_cols=46 Identities=2% Similarity=-0.241 Sum_probs=28.6
Q ss_pred cchhHHHHHHHHhCCeEecccCCCccEEEEcCCCCCcHHHHHHHHCCCceecHHHHHH
Q 041003 209 FEFPLLKWRAGELGAACTDVYNLSVAQVVSVSSRLGIKGHRLAEQHNKFLVHPQWIYA 266 (282)
Q Consensus 209 ~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~~~t~K~~~A~~~gi~IV~~~WL~~ 266 (282)
|....+..+++.+|.. .+++-+ .+..-+..|...|+.++...|-..
T Consensus 138 p~~~~~~~~~~~~~~~----------~~~~iG--D~~~Di~~a~~aG~~~~~~~~~~~ 183 (190)
T 2fi1_A 138 PNPESMLYLREKYQIS----------SGLVIG--DRPIDIEAGQAAGLDTHLFTSIVN 183 (190)
T ss_dssp TSCHHHHHHHHHTTCS----------SEEEEE--SSHHHHHHHHHTTCEEEECSCHHH
T ss_pred CCHHHHHHHHHHcCCC----------eEEEEc--CCHHHHHHHHHcCCeEEEECCCCC
Confidence 4456778888888754 234432 233456667778988776666443
No 205
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=79.95 E-value=0.69 Score=38.67 Aligned_cols=16 Identities=31% Similarity=0.376 Sum_probs=13.5
Q ss_pred eeEEEeCCCceeeeec
Q 041003 12 LHLVLDLDQTLPHAVD 27 (282)
Q Consensus 12 l~LVLDLD~TLihs~~ 27 (282)
..+++||||||+.+..
T Consensus 24 k~iiFDlDGTL~d~~~ 39 (243)
T 2hsz_A 24 KLIGFDLDGTLVNSLP 39 (243)
T ss_dssp SEEEECSBTTTEECHH
T ss_pred CEEEEcCCCcCCCCHH
Confidence 3689999999999853
No 206
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=79.85 E-value=0.68 Score=37.08 Aligned_cols=17 Identities=24% Similarity=0.391 Sum_probs=13.9
Q ss_pred CeeEEEeCCCceeeeec
Q 041003 11 KLHLVLDLDQTLPHAVD 27 (282)
Q Consensus 11 kl~LVLDLD~TLihs~~ 27 (282)
...+++||||||+.+..
T Consensus 4 ik~i~fDlDGTL~d~~~ 20 (219)
T 3kd3_A 4 MKNIIFDFDSTLIKKES 20 (219)
T ss_dssp CEEEEECCCCCCBSSCH
T ss_pred ceEEEEeCCCCCcCccc
Confidence 45789999999998653
No 207
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=79.82 E-value=0.69 Score=37.66 Aligned_cols=16 Identities=31% Similarity=0.347 Sum_probs=13.8
Q ss_pred eeEEEeCCCceeeeec
Q 041003 12 LHLVLDLDQTLPHAVD 27 (282)
Q Consensus 12 l~LVLDLD~TLihs~~ 27 (282)
..+++||||||+.+..
T Consensus 5 k~viFDlDGTL~d~~~ 20 (210)
T 2ah5_A 5 TAIFFDLDGTLVDSSI 20 (210)
T ss_dssp CEEEECSBTTTEECHH
T ss_pred CEEEEcCCCcCccCHH
Confidence 4789999999999854
No 208
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=79.27 E-value=0.7 Score=36.46 Aligned_cols=16 Identities=31% Similarity=0.459 Sum_probs=13.6
Q ss_pred eeEEEeCCCceeeeec
Q 041003 12 LHLVLDLDQTLPHAVD 27 (282)
Q Consensus 12 l~LVLDLD~TLihs~~ 27 (282)
..+++|+||||+.+..
T Consensus 5 k~i~fDlDGTL~~~~~ 20 (207)
T 2go7_A 5 TAFIWDLDGTLLDSYE 20 (207)
T ss_dssp CEEEECTBTTTEECHH
T ss_pred cEEEEeCCCcccccHH
Confidence 4789999999998754
No 209
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=79.27 E-value=0.67 Score=37.17 Aligned_cols=15 Identities=20% Similarity=0.177 Sum_probs=13.1
Q ss_pred eEEEeCCCceeeeec
Q 041003 13 HLVLDLDQTLPHAVD 27 (282)
Q Consensus 13 ~LVLDLD~TLihs~~ 27 (282)
.+++|+||||+.+..
T Consensus 3 ~iiFDlDGTL~d~~~ 17 (201)
T 2w43_A 3 ILAFDIFGTVLDTST 17 (201)
T ss_dssp EEEECCBTTTEEGGG
T ss_pred EEEEeCCCceecchh
Confidence 579999999999864
No 210
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=78.69 E-value=0.79 Score=36.43 Aligned_cols=17 Identities=18% Similarity=0.268 Sum_probs=14.2
Q ss_pred CeeEEEeCCCceeeeec
Q 041003 11 KLHLVLDLDQTLPHAVD 27 (282)
Q Consensus 11 kl~LVLDLD~TLihs~~ 27 (282)
...+++|+||||+.+..
T Consensus 5 ~k~i~fDlDGTL~~~~~ 21 (214)
T 3e58_A 5 VEAIIFDMDGVLFDTEK 21 (214)
T ss_dssp CCEEEEESBTTTBCCHH
T ss_pred ccEEEEcCCCCccccHH
Confidence 45789999999998754
No 211
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=78.47 E-value=0.8 Score=36.84 Aligned_cols=16 Identities=31% Similarity=0.482 Sum_probs=13.7
Q ss_pred eeEEEeCCCceeeeec
Q 041003 12 LHLVLDLDQTLPHAVD 27 (282)
Q Consensus 12 l~LVLDLD~TLihs~~ 27 (282)
..+++||||||+.+..
T Consensus 5 k~iifDlDGTL~d~~~ 20 (209)
T 2hdo_A 5 QALMFDIDGTLTNSQP 20 (209)
T ss_dssp SEEEECSBTTTEECHH
T ss_pred cEEEEcCCCCCcCCHH
Confidence 4789999999999854
No 212
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=78.46 E-value=0.82 Score=37.43 Aligned_cols=19 Identities=32% Similarity=0.410 Sum_probs=15.1
Q ss_pred CCCeeEEEeCCCceeeeec
Q 041003 9 QKKLHLVLDLDQTLPHAVD 27 (282)
Q Consensus 9 ~~kl~LVLDLD~TLihs~~ 27 (282)
.+-..+++||||||+.+..
T Consensus 17 ~~ik~i~fDlDGTL~d~~~ 35 (237)
T 4ex6_A 17 AADRGVILDLDGTLADTPA 35 (237)
T ss_dssp CCCEEEEECSBTTTBCCHH
T ss_pred ccCCEEEEcCCCCCcCCHH
Confidence 3445789999999998754
No 213
>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*
Probab=78.22 E-value=0.7 Score=39.20 Aligned_cols=14 Identities=36% Similarity=0.321 Sum_probs=12.6
Q ss_pred eEEEeCCCceeeee
Q 041003 13 HLVLDLDQTLPHAV 26 (282)
Q Consensus 13 ~LVLDLD~TLihs~ 26 (282)
.+++||||||+.+.
T Consensus 2 li~~DlDGTLl~~~ 15 (259)
T 3zx4_A 2 IVFTDLDGTLLDER 15 (259)
T ss_dssp EEEECCCCCCSCSS
T ss_pred EEEEeCCCCCcCCC
Confidence 68999999999886
No 214
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=78.02 E-value=0.76 Score=38.29 Aligned_cols=16 Identities=31% Similarity=0.187 Sum_probs=13.8
Q ss_pred eeEEEeCCCceeeeec
Q 041003 12 LHLVLDLDQTLPHAVD 27 (282)
Q Consensus 12 l~LVLDLD~TLihs~~ 27 (282)
..+++||||||+.+..
T Consensus 14 k~iifDlDGTL~d~~~ 29 (251)
T 2pke_A 14 QLVGFDGDDTLWKSED 29 (251)
T ss_dssp CEEEECCBTTTBCCHH
T ss_pred eEEEEeCCCCCccCcH
Confidence 4789999999999754
No 215
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=77.91 E-value=0.78 Score=37.55 Aligned_cols=46 Identities=11% Similarity=-0.100 Sum_probs=25.7
Q ss_pred cchhHHHHHHHHhCCeEecccCCCccEEEEcCCCCCcHHHHHHHHCCCceecHHH
Q 041003 209 FEFPLLKWRAGELGAACTDVYNLSVAQVVSVSSRLGIKGHRLAEQHNKFLVHPQW 263 (282)
Q Consensus 209 ~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~~~t~K~~~A~~~gi~IV~~~W 263 (282)
|....+..+++.+|..- ..+++-+|+. ..-+..|...|+.++-..|
T Consensus 177 pk~~~~~~~~~~lgi~~--------~~~i~iGD~~-~nDi~~~~~aG~~~~~v~~ 222 (250)
T 2c4n_A 177 PSPWIIRAALNKMQAHS--------EETVIVGDNL-RTDILAGFQAGLETILVLS 222 (250)
T ss_dssp TSTHHHHHHHHHHTCCG--------GGEEEEESCT-TTHHHHHHHTTCEEEEESS
T ss_pred CCHHHHHHHHHHcCCCc--------ceEEEECCCc-hhHHHHHHHcCCeEEEECC
Confidence 44567888889888422 2344442221 2345667777876554433
No 216
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=77.83 E-value=0.79 Score=37.17 Aligned_cols=16 Identities=19% Similarity=0.146 Sum_probs=13.7
Q ss_pred eeEEEeCCCceeeeec
Q 041003 12 LHLVLDLDQTLPHAVD 27 (282)
Q Consensus 12 l~LVLDLD~TLihs~~ 27 (282)
..+++|+||||+.+..
T Consensus 5 k~i~fDlDGTL~d~~~ 20 (229)
T 2fdr_A 5 DLIIFDCDGVLVDSEI 20 (229)
T ss_dssp SEEEECSBTTTBCCHH
T ss_pred cEEEEcCCCCcCccHH
Confidence 4789999999998754
No 217
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=77.57 E-value=0.83 Score=37.47 Aligned_cols=17 Identities=29% Similarity=0.301 Sum_probs=14.2
Q ss_pred CeeEEEeCCCceeeeec
Q 041003 11 KLHLVLDLDQTLPHAVD 27 (282)
Q Consensus 11 kl~LVLDLD~TLihs~~ 27 (282)
...+++|+||||+.+..
T Consensus 4 ~k~viFDlDGTL~d~~~ 20 (232)
T 3fvv_A 4 RRLALFDLDHTLLPLDS 20 (232)
T ss_dssp CEEEEECCBTTTBSSCH
T ss_pred CcEEEEeCCCCCcCCch
Confidence 35789999999999854
No 218
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=77.34 E-value=0.9 Score=36.85 Aligned_cols=17 Identities=35% Similarity=0.554 Sum_probs=14.2
Q ss_pred CeeEEEeCCCceeeeec
Q 041003 11 KLHLVLDLDQTLPHAVD 27 (282)
Q Consensus 11 kl~LVLDLD~TLihs~~ 27 (282)
...+++||||||+.+..
T Consensus 6 ~k~i~fDlDGTL~~~~~ 22 (233)
T 3s6j_A 6 QTSFIFDLDGTLTDSVY 22 (233)
T ss_dssp CCEEEECCBTTTEECHH
T ss_pred CcEEEEcCCCccccChH
Confidence 45789999999998854
No 219
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=77.27 E-value=0.85 Score=36.37 Aligned_cols=47 Identities=9% Similarity=-0.089 Sum_probs=26.7
Q ss_pred cchhHHHHHHHHhCCeEecccCCCccEEEEcCCCCCcHHHHHHHHCCCceecHHHHH
Q 041003 209 FEFPLLKWRAGELGAACTDVYNLSVAQVVSVSSRLGIKGHRLAEQHNKFLVHPQWIY 265 (282)
Q Consensus 209 ~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~~~t~K~~~A~~~gi~IV~~~WL~ 265 (282)
|....+...++.+|.. ++ .+++-+ + +..-+..|.+.|+..+...|-.
T Consensus 142 p~~~~~~~~~~~~~~~------~~--~~~~vg-D-~~~Di~~a~~aG~~~~~~~~~~ 188 (200)
T 3cnh_A 142 PNPAMYRLGLTLAQVR------PE--EAVMVD-D-RLQNVQAARAVGMHAVQCVDAA 188 (200)
T ss_dssp TCHHHHHHHHHHHTCC------GG--GEEEEE-S-CHHHHHHHHHTTCEEEECSCHH
T ss_pred CCHHHHHHHHHHcCCC------HH--HeEEeC-C-CHHHHHHHHHCCCEEEEECCch
Confidence 3455667778888743 21 233332 2 2234677788888777555543
No 220
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=76.95 E-value=0.68 Score=37.26 Aligned_cols=16 Identities=19% Similarity=0.455 Sum_probs=13.4
Q ss_pred eeEEEeCCCceeeeec
Q 041003 12 LHLVLDLDQTLPHAVD 27 (282)
Q Consensus 12 l~LVLDLD~TLihs~~ 27 (282)
..+++||||||+.+..
T Consensus 3 k~i~fDlDGTL~d~~~ 18 (221)
T 2wf7_A 3 KAVLFDLDGVITDTAE 18 (221)
T ss_dssp CEEEECCBTTTBTHHH
T ss_pred cEEEECCCCcccCChH
Confidence 3689999999998754
No 221
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=76.90 E-value=1 Score=36.79 Aligned_cols=16 Identities=19% Similarity=0.181 Sum_probs=14.0
Q ss_pred eeEEEeCCCceeeeec
Q 041003 12 LHLVLDLDQTLPHAVD 27 (282)
Q Consensus 12 l~LVLDLD~TLihs~~ 27 (282)
..+++|+||||+.+..
T Consensus 4 k~viFDlDGTL~d~~~ 19 (220)
T 2zg6_A 4 KAVLVDFGNTLVGFKP 19 (220)
T ss_dssp CEEEECSBTTTEEEEE
T ss_pred eEEEEcCCCceecccc
Confidence 4789999999999865
No 222
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=76.87 E-value=0.92 Score=36.44 Aligned_cols=17 Identities=24% Similarity=0.300 Sum_probs=14.1
Q ss_pred CeeEEEeCCCceeeeec
Q 041003 11 KLHLVLDLDQTLPHAVD 27 (282)
Q Consensus 11 kl~LVLDLD~TLihs~~ 27 (282)
...+++||||||+.+..
T Consensus 9 ~k~i~fDlDGTL~~~~~ 25 (226)
T 1te2_A 9 ILAAIFDMDGLLIDSEP 25 (226)
T ss_dssp CCEEEECCBTTTBCCHH
T ss_pred CCEEEECCCCCcCcCHH
Confidence 45789999999998754
No 223
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=76.71 E-value=0.86 Score=37.85 Aligned_cols=16 Identities=19% Similarity=0.312 Sum_probs=13.8
Q ss_pred eeEEEeCCCceeeeec
Q 041003 12 LHLVLDLDQTLPHAVD 27 (282)
Q Consensus 12 l~LVLDLD~TLihs~~ 27 (282)
..+++||||||+.+..
T Consensus 5 k~viFDlDGTL~ds~~ 20 (240)
T 2hi0_A 5 KAAIFDMDGTILDTSA 20 (240)
T ss_dssp SEEEECSBTTTEECHH
T ss_pred cEEEEecCCCCccCHH
Confidence 4789999999999864
No 224
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=76.46 E-value=0.95 Score=36.50 Aligned_cols=16 Identities=25% Similarity=0.175 Sum_probs=13.8
Q ss_pred eeEEEeCCCceeeeec
Q 041003 12 LHLVLDLDQTLPHAVD 27 (282)
Q Consensus 12 l~LVLDLD~TLihs~~ 27 (282)
..+++||||||+.+..
T Consensus 9 k~i~fDlDGTL~~~~~ 24 (234)
T 3ddh_A 9 KVIAFDADDTLWSNEP 24 (234)
T ss_dssp CEEEECCBTTTBCCHH
T ss_pred cEEEEeCCCCCccCcc
Confidence 5789999999999864
No 225
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=75.86 E-value=0.88 Score=37.04 Aligned_cols=17 Identities=24% Similarity=0.288 Sum_probs=14.0
Q ss_pred CeeEEEeCCCceeeeec
Q 041003 11 KLHLVLDLDQTLPHAVD 27 (282)
Q Consensus 11 kl~LVLDLD~TLihs~~ 27 (282)
...+++|+||||+.+..
T Consensus 7 ~k~i~fDlDGTL~d~~~ 23 (238)
T 3ed5_A 7 YRTLLFDVDDTILDFQA 23 (238)
T ss_dssp CCEEEECCBTTTBCHHH
T ss_pred CCEEEEcCcCcCcCCch
Confidence 35789999999998754
No 226
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=75.52 E-value=0.87 Score=37.17 Aligned_cols=16 Identities=19% Similarity=0.482 Sum_probs=13.5
Q ss_pred eeEEEeCCCceeeeec
Q 041003 12 LHLVLDLDQTLPHAVD 27 (282)
Q Consensus 12 l~LVLDLD~TLihs~~ 27 (282)
..+++||||||+.+..
T Consensus 3 k~i~fDlDGTL~d~~~ 18 (233)
T 3nas_A 3 KAVIFDLDGVITDTAE 18 (233)
T ss_dssp CEEEECSBTTTBCHHH
T ss_pred cEEEECCCCCcCCCHH
Confidence 3689999999998754
No 227
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=75.41 E-value=0.84 Score=37.03 Aligned_cols=16 Identities=19% Similarity=-0.014 Sum_probs=13.5
Q ss_pred eeEEEeCCCceeeeec
Q 041003 12 LHLVLDLDQTLPHAVD 27 (282)
Q Consensus 12 l~LVLDLD~TLihs~~ 27 (282)
..+++||||||+.+..
T Consensus 5 k~i~fDlDGTL~d~~~ 20 (235)
T 2om6_A 5 KLVTFDVWNTLLDLNI 20 (235)
T ss_dssp CEEEECCBTTTBCHHH
T ss_pred eEEEEeCCCCCCCcch
Confidence 4789999999998753
No 228
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=74.91 E-value=1 Score=37.18 Aligned_cols=17 Identities=18% Similarity=0.065 Sum_probs=14.0
Q ss_pred CeeEEEeCCCceeeeec
Q 041003 11 KLHLVLDLDQTLPHAVD 27 (282)
Q Consensus 11 kl~LVLDLD~TLihs~~ 27 (282)
...+++||||||+.+..
T Consensus 22 ik~i~fDlDGTL~d~~~ 38 (254)
T 3umc_A 22 MRAILFDVFGTLVDWRS 38 (254)
T ss_dssp CCEEEECCBTTTEEHHH
T ss_pred CcEEEEeCCCccEecCc
Confidence 45789999999998754
No 229
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=74.75 E-value=1.1 Score=37.26 Aligned_cols=18 Identities=28% Similarity=0.407 Sum_probs=14.5
Q ss_pred CCeeEEEeCCCceeeeec
Q 041003 10 KKLHLVLDLDQTLPHAVD 27 (282)
Q Consensus 10 ~kl~LVLDLD~TLihs~~ 27 (282)
+...+++|+||||+.+..
T Consensus 29 ~ik~i~fDlDGTL~d~~~ 46 (250)
T 3l5k_A 29 PVTHLIFDMDGLLLDTER 46 (250)
T ss_dssp CCSEEEEETBTTTBCHHH
T ss_pred CCcEEEEcCCCCcCCCHH
Confidence 345789999999998753
No 230
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=74.61 E-value=1.1 Score=36.43 Aligned_cols=16 Identities=31% Similarity=0.335 Sum_probs=13.6
Q ss_pred eeEEEeCCCceeeeec
Q 041003 12 LHLVLDLDQTLPHAVD 27 (282)
Q Consensus 12 l~LVLDLD~TLihs~~ 27 (282)
..+++|+||||+++..
T Consensus 3 k~i~fDlDGTL~~~~~ 18 (230)
T 3vay_A 3 KLVTFDLDDTLWDTAP 18 (230)
T ss_dssp CEEEECCBTTTBCSHH
T ss_pred eEEEecCcccCcCCch
Confidence 4789999999998864
No 231
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=74.60 E-value=1 Score=37.72 Aligned_cols=16 Identities=6% Similarity=-0.161 Sum_probs=13.6
Q ss_pred eeEEEeCCCceeeeec
Q 041003 12 LHLVLDLDQTLPHAVD 27 (282)
Q Consensus 12 l~LVLDLD~TLihs~~ 27 (282)
..+++||||||+.+..
T Consensus 7 k~i~fDlDGTLld~~~ 22 (267)
T 1swv_A 7 EAVIFAWAGTTVDYGC 22 (267)
T ss_dssp CEEEECSBTTTBSTTC
T ss_pred eEEEEecCCCEEeCCC
Confidence 4789999999999754
No 232
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=74.55 E-value=1.3 Score=36.81 Aligned_cols=15 Identities=20% Similarity=0.226 Sum_probs=13.2
Q ss_pred eeEEEeCCCceeeee
Q 041003 12 LHLVLDLDQTLPHAV 26 (282)
Q Consensus 12 l~LVLDLD~TLihs~ 26 (282)
..+++||||||+.+.
T Consensus 13 k~i~fDlDGTLl~s~ 27 (271)
T 2x4d_A 13 RGVLLDISGVLYDSG 27 (271)
T ss_dssp CEEEECCBTTTEECC
T ss_pred CEEEEeCCCeEEecC
Confidence 468999999999975
No 233
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=74.46 E-value=1.2 Score=36.23 Aligned_cols=16 Identities=25% Similarity=0.083 Sum_probs=13.4
Q ss_pred CeeEEEeCCCceeeee
Q 041003 11 KLHLVLDLDQTLPHAV 26 (282)
Q Consensus 11 kl~LVLDLD~TLihs~ 26 (282)
...+++|+||||+.+.
T Consensus 4 ~k~i~FDlDGTL~d~~ 19 (233)
T 3umb_A 4 IRAVVFDAYGTLFDVY 19 (233)
T ss_dssp CCEEEECSBTTTEETH
T ss_pred ceEEEEeCCCcccccH
Confidence 3578999999999874
No 234
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=74.25 E-value=0.93 Score=37.45 Aligned_cols=16 Identities=31% Similarity=0.424 Sum_probs=13.6
Q ss_pred eeEEEeCCCceeeeec
Q 041003 12 LHLVLDLDQTLPHAVD 27 (282)
Q Consensus 12 l~LVLDLD~TLihs~~ 27 (282)
..+++||||||+.+..
T Consensus 3 k~iiFDlDGTL~d~~~ 18 (241)
T 2hoq_A 3 KVIFFDLDDTLVDTSK 18 (241)
T ss_dssp CEEEECSBTTTBCHHH
T ss_pred cEEEEcCCCCCCCChh
Confidence 3689999999999864
No 235
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=74.01 E-value=1.3 Score=36.93 Aligned_cols=18 Identities=22% Similarity=0.209 Sum_probs=14.6
Q ss_pred CCeeEEEeCCCceeeeec
Q 041003 10 KKLHLVLDLDQTLPHAVD 27 (282)
Q Consensus 10 ~kl~LVLDLD~TLihs~~ 27 (282)
+...+++||||||+.+..
T Consensus 27 ~ik~i~fDlDGTL~d~~~ 44 (259)
T 4eek_A 27 PFDAVLFDLDGVLVESEG 44 (259)
T ss_dssp CCSEEEEESBTTTEECHH
T ss_pred CCCEEEECCCCCcccCHH
Confidence 345889999999998753
No 236
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=73.90 E-value=1.1 Score=38.06 Aligned_cols=19 Identities=26% Similarity=0.375 Sum_probs=15.4
Q ss_pred CCCeeEEEeCCCceeeeec
Q 041003 9 QKKLHLVLDLDQTLPHAVD 27 (282)
Q Consensus 9 ~~kl~LVLDLD~TLihs~~ 27 (282)
.+...+++||||||+.+..
T Consensus 16 ~~~k~viFDlDGTLvds~~ 34 (260)
T 2gfh_A 16 SRVRAVFFDLDNTLIDTAG 34 (260)
T ss_dssp CCCCEEEECCBTTTBCHHH
T ss_pred ccceEEEEcCCCCCCCCHH
Confidence 3455789999999999864
No 237
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=73.55 E-value=3.8 Score=32.38 Aligned_cols=17 Identities=35% Similarity=0.477 Sum_probs=14.3
Q ss_pred CCeeEEEeCCCceeeee
Q 041003 10 KKLHLVLDLDQTLPHAV 26 (282)
Q Consensus 10 ~kl~LVLDLD~TLihs~ 26 (282)
+...+++||||||+.+.
T Consensus 4 ~~k~i~fDlDGTL~d~~ 20 (211)
T 1l7m_A 4 KKKLILFDFDSTLVNNE 20 (211)
T ss_dssp CCEEEEEECCCCCBSSC
T ss_pred CCcEEEEeCCCCCCCcc
Confidence 34578999999999984
No 238
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=73.31 E-value=1 Score=36.62 Aligned_cols=17 Identities=24% Similarity=-0.037 Sum_probs=13.9
Q ss_pred CeeEEEeCCCceeeeec
Q 041003 11 KLHLVLDLDQTLPHAVD 27 (282)
Q Consensus 11 kl~LVLDLD~TLihs~~ 27 (282)
...+++|+||||+.+..
T Consensus 6 ~k~i~fD~DGTL~d~~~ 22 (240)
T 3smv_A 6 FKALTFDCYGTLIDWET 22 (240)
T ss_dssp CSEEEECCBTTTBCHHH
T ss_pred ceEEEEeCCCcCcCCch
Confidence 34789999999998754
No 239
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=73.21 E-value=1.2 Score=38.01 Aligned_cols=16 Identities=19% Similarity=0.177 Sum_probs=13.8
Q ss_pred eeEEEeCCCceeeeec
Q 041003 12 LHLVLDLDQTLPHAVD 27 (282)
Q Consensus 12 l~LVLDLD~TLihs~~ 27 (282)
..+++||||||+++..
T Consensus 36 k~iifDlDGTLlds~~ 51 (275)
T 2qlt_A 36 NAALFDVDGTIIISQP 51 (275)
T ss_dssp SEEEECCBTTTEECHH
T ss_pred CEEEECCCCCCCCCHH
Confidence 4789999999999864
No 240
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=73.11 E-value=1.3 Score=36.63 Aligned_cols=17 Identities=18% Similarity=0.300 Sum_probs=14.1
Q ss_pred CeeEEEeCCCceeeeec
Q 041003 11 KLHLVLDLDQTLPHAVD 27 (282)
Q Consensus 11 kl~LVLDLD~TLihs~~ 27 (282)
...+++|+||||+.+..
T Consensus 24 ~k~i~fDlDGTL~d~~~ 40 (243)
T 3qxg_A 24 LKAVLFDMDGVLFNSMP 40 (243)
T ss_dssp CCEEEECSBTTTBCCHH
T ss_pred CCEEEEcCCCCCCCCHH
Confidence 35789999999998754
No 241
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=72.59 E-value=1.3 Score=36.34 Aligned_cols=16 Identities=31% Similarity=0.434 Sum_probs=13.6
Q ss_pred eeEEEeCCCceeeeec
Q 041003 12 LHLVLDLDQTLPHAVD 27 (282)
Q Consensus 12 l~LVLDLD~TLihs~~ 27 (282)
..+++||||||+.+..
T Consensus 4 k~viFDlDGTL~d~~~ 19 (222)
T 2nyv_A 4 RVILFDLDGTLIDSAK 19 (222)
T ss_dssp CEEEECTBTTTEECHH
T ss_pred CEEEECCCCcCCCCHH
Confidence 3689999999998864
No 242
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=72.57 E-value=1.1 Score=36.36 Aligned_cols=16 Identities=19% Similarity=0.048 Sum_probs=13.5
Q ss_pred eeEEEeCCCceeeeec
Q 041003 12 LHLVLDLDQTLPHAVD 27 (282)
Q Consensus 12 l~LVLDLD~TLihs~~ 27 (282)
..+++|+||||+.+..
T Consensus 3 k~i~fDlDGTL~d~~~ 18 (234)
T 3u26_A 3 RAVFFDSLGTLNSVEG 18 (234)
T ss_dssp CEEEECSTTTTBCHHH
T ss_pred cEEEEcCCCccccccc
Confidence 4689999999999863
No 243
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=72.42 E-value=1.2 Score=36.21 Aligned_cols=17 Identities=29% Similarity=0.262 Sum_probs=14.1
Q ss_pred CeeEEEeCCCceeeeec
Q 041003 11 KLHLVLDLDQTLPHAVD 27 (282)
Q Consensus 11 kl~LVLDLD~TLihs~~ 27 (282)
...+++|+||||+.+..
T Consensus 5 ~k~i~fDlDGTL~d~~~ 21 (240)
T 3qnm_A 5 YKNLFFDLDDTIWAFSR 21 (240)
T ss_dssp CSEEEECCBTTTBCHHH
T ss_pred ceEEEEcCCCCCcCchh
Confidence 45789999999998754
No 244
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=72.25 E-value=1.1 Score=36.76 Aligned_cols=17 Identities=12% Similarity=-0.074 Sum_probs=14.1
Q ss_pred CeeEEEeCCCceeeeec
Q 041003 11 KLHLVLDLDQTLPHAVD 27 (282)
Q Consensus 11 kl~LVLDLD~TLihs~~ 27 (282)
...+++||||||+.+..
T Consensus 15 ~k~i~fDlDGTL~d~~~ 31 (254)
T 3umg_A 15 VRAVLFDTFGTVVDWRT 31 (254)
T ss_dssp CCEEEECCBTTTBCHHH
T ss_pred ceEEEEeCCCceecCch
Confidence 45789999999998754
No 245
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=71.73 E-value=1.5 Score=36.33 Aligned_cols=17 Identities=24% Similarity=0.378 Sum_probs=13.9
Q ss_pred CCeeEEEeCCCceeeee
Q 041003 10 KKLHLVLDLDQTLPHAV 26 (282)
Q Consensus 10 ~kl~LVLDLD~TLihs~ 26 (282)
....+++|+||||+.+.
T Consensus 5 ~~k~viFD~DGTL~d~d 21 (236)
T 2fea_A 5 RKPFIICDFDGTITMND 21 (236)
T ss_dssp CCEEEEECCTTTTBSSC
T ss_pred CCcEEEEeCCCCCCccc
Confidence 34589999999999763
No 246
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=71.43 E-value=1 Score=36.42 Aligned_cols=18 Identities=22% Similarity=0.447 Sum_probs=15.4
Q ss_pred CCeeEEEeCCCceeeeec
Q 041003 10 KKLHLVLDLDQTLPHAVD 27 (282)
Q Consensus 10 ~kl~LVLDLD~TLihs~~ 27 (282)
++..+++|+||||+.|..
T Consensus 3 ~~k~viFDlDGTL~Ds~~ 20 (197)
T 1q92_A 3 RALRVLVDMDGVLADFEG 20 (197)
T ss_dssp CCEEEEECSBTTTBCHHH
T ss_pred CceEEEEeCCCCCccCcH
Confidence 456889999999999865
No 247
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=71.04 E-value=1.4 Score=36.96 Aligned_cols=16 Identities=19% Similarity=0.432 Sum_probs=13.1
Q ss_pred eeEEEeCCCceeeeec
Q 041003 12 LHLVLDLDQTLPHAVD 27 (282)
Q Consensus 12 l~LVLDLD~TLihs~~ 27 (282)
..+++|+||||+.|..
T Consensus 6 KaViFDlDGTL~Ds~~ 21 (243)
T 4g9b_A 6 QGVIFDLDGVITDTAH 21 (243)
T ss_dssp CEEEECSBTTTBCCHH
T ss_pred cEEEEcCCCcccCCHH
Confidence 4689999999998743
No 248
>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24
Probab=70.75 E-value=1.5 Score=38.82 Aligned_cols=37 Identities=14% Similarity=0.140 Sum_probs=31.6
Q ss_pred EecccHHHHHHHHhcCceEEEEcCCcHHHHHHHHhhh
Q 041003 62 KVRSYIRKFLKKASKMYDIYLCTTRIRSYAMMMAKLL 98 (282)
Q Consensus 62 ~~RP~l~~FL~~~~~~yei~i~T~~~~~Ya~~v~~~l 98 (282)
..+|++.++|+.+.+.+.+.++|.+...|+..+.+.+
T Consensus 103 ~~~~~~~~~l~~l~~g~~~~i~t~~~~~~~~~~~~~~ 139 (332)
T 1y8a_A 103 KFVPDAEKAMATLQERWTPVVISTSYTQYLRRTASMI 139 (332)
T ss_dssp CBCTTHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHcCCcEEEEECCceEEEcccchhh
Confidence 5689999999999777778999999989998887765
No 249
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=68.19 E-value=1.9 Score=36.36 Aligned_cols=15 Identities=27% Similarity=0.253 Sum_probs=13.1
Q ss_pred eEEEeCCCceeeeec
Q 041003 13 HLVLDLDQTLPHAVD 27 (282)
Q Consensus 13 ~LVLDLD~TLihs~~ 27 (282)
.+++|+||||+.+..
T Consensus 3 ~iiFDlDGTL~d~~~ 17 (263)
T 3k1z_A 3 LLTWDVKDTLLRLRH 17 (263)
T ss_dssp EEEECCBTTTEEESS
T ss_pred EEEEcCCCceeCCCC
Confidence 689999999999764
No 250
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=67.49 E-value=5.3 Score=36.50 Aligned_cols=40 Identities=10% Similarity=0.141 Sum_probs=36.0
Q ss_pred EEecccHHHHHHHHh-cCceEEEEcCCcHHHHHHHHhhhcC
Q 041003 61 VKVRSYIRKFLKKAS-KMYDIYLCTTRIRSYAMMMAKLLNP 100 (282)
Q Consensus 61 v~~RP~l~~FL~~~~-~~yei~i~T~~~~~Ya~~v~~~ldp 100 (282)
++++|+..+.++.+. .-++++|.|+|....+.++++.+..
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~ 260 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNN 260 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTS
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCc
Confidence 458999999999996 5699999999999999999998754
No 251
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=67.49 E-value=3.2 Score=35.93 Aligned_cols=41 Identities=10% Similarity=0.113 Sum_probs=36.9
Q ss_pred EEEecccHHHHHHHHhc-CceEEEEcCCcHHHHHHHHhhhcC
Q 041003 60 LVKVRSYIRKFLKKASK-MYDIYLCTTRIRSYAMMMAKLLNP 100 (282)
Q Consensus 60 ~v~~RP~l~~FL~~~~~-~yei~i~T~~~~~Ya~~v~~~ldp 100 (282)
-+.+|||+.+|++.+.+ ...++|.|.|....+.++++.+..
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~ 180 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGV 180 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTC
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCC
Confidence 36899999999999975 589999999999999999999854
No 252
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=65.73 E-value=1.9 Score=36.86 Aligned_cols=45 Identities=11% Similarity=-0.149 Sum_probs=26.6
Q ss_pred cchhHHHHHHHHhCCeEecccCCCccEEEEcCCCCCcHHHHHHHHCCCceecHHH
Q 041003 209 FEFPLLKWRAGELGAACTDVYNLSVAQVVSVSSRLGIKGHRLAEQHNKFLVHPQW 263 (282)
Q Consensus 209 ~~~~~l~~~~~~~Ga~v~~~~~~~vTHlV~~~~~~~t~K~~~A~~~gi~IV~~~W 263 (282)
|....+...++.+|..- +- -++.. + ...-+..|++.|+..|...|
T Consensus 188 P~p~~~~~a~~~lg~~p------~~-~l~vg--D-s~~di~aA~~aG~~~i~v~~ 232 (253)
T 2g80_A 188 TETQSYANILRDIGAKA------SE-VLFLS--D-NPLELDAAAGVGIATGLASR 232 (253)
T ss_dssp TCHHHHHHHHHHHTCCG------GG-EEEEE--S-CHHHHHHHHTTTCEEEEECC
T ss_pred CCHHHHHHHHHHcCCCc------cc-EEEEc--C-CHHHHHHHHHcCCEEEEEcC
Confidence 44566677788887542 21 23334 2 23446678888987766544
No 253
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=64.11 E-value=2 Score=36.55 Aligned_cols=16 Identities=19% Similarity=0.258 Sum_probs=13.8
Q ss_pred CeeEEEeCCCceeeee
Q 041003 11 KLHLVLDLDQTLPHAV 26 (282)
Q Consensus 11 kl~LVLDLD~TLihs~ 26 (282)
-..+++||||||+.+.
T Consensus 10 ikaviFDlDGTL~ds~ 25 (261)
T 1yns_A 10 VTVILLDIEGTTTPIA 25 (261)
T ss_dssp CCEEEECCBTTTBCHH
T ss_pred CCEEEEecCCCccchh
Confidence 4579999999999985
No 254
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=63.81 E-value=2.9 Score=33.42 Aligned_cols=13 Identities=31% Similarity=0.240 Sum_probs=11.6
Q ss_pred eeEEEeCCCceee
Q 041003 12 LHLVLDLDQTLPH 24 (282)
Q Consensus 12 l~LVLDLD~TLih 24 (282)
..+++|+||||+.
T Consensus 3 k~viFD~DGTL~d 15 (206)
T 1rku_A 3 EIACLDLEGVLVP 15 (206)
T ss_dssp EEEEEESBTTTBC
T ss_pred cEEEEccCCcchh
Confidence 3689999999998
No 255
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=59.23 E-value=3.6 Score=35.42 Aligned_cols=16 Identities=19% Similarity=0.245 Sum_probs=13.9
Q ss_pred eeEEEeCCCceeeeec
Q 041003 12 LHLVLDLDQTLPHAVD 27 (282)
Q Consensus 12 l~LVLDLD~TLihs~~ 27 (282)
.++++|+||||+.+..
T Consensus 33 ~~viFD~dGTL~ds~~ 48 (287)
T 3a1c_A 33 TAVIFDKTGTLTKGKP 48 (287)
T ss_dssp CEEEEECCCCCBCSCC
T ss_pred CEEEEeCCCCCcCCCE
Confidence 3789999999999865
No 256
>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*
Probab=57.80 E-value=7 Score=37.52 Aligned_cols=42 Identities=14% Similarity=0.131 Sum_probs=37.7
Q ss_pred eeEEEEecccHHHHHHHHhcCceEEEEcCCcHHHHHHHHhhh
Q 041003 57 ELFLVKVRSYIRKFLKKASKMYDIYLCTTRIRSYAMMMAKLL 98 (282)
Q Consensus 57 ~~~~v~~RP~l~~FL~~~~~~yei~i~T~~~~~Ya~~v~~~l 98 (282)
...||.+-|.+..+|+++.+.-.++|-|++...|++.+++.+
T Consensus 241 pekYv~kdp~l~~~L~~Lr~~GKlfLiTNS~~~yv~~~m~yl 282 (555)
T 2jc9_A 241 LEKYVVKDGKLPLLLSRMKEVGKVFLATNSDYKYTDKIMTYL 282 (555)
T ss_dssp HHHHBCCCTHHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHH
T ss_pred HHHhcCCChHHHHHHHHHHHcCCEEEEeCCChHHHHHHHHHh
Confidence 346888899999999999765599999999999999999998
No 257
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=53.20 E-value=11 Score=27.41 Aligned_cols=40 Identities=10% Similarity=0.149 Sum_probs=34.9
Q ss_pred cccHHHHHHHHhcCceEEEEcCC-----cHHHHHHHHhhhcCCCc
Q 041003 64 RSYIRKFLKKASKMYDIYLCTTR-----IRSYAMMMAKLLNPKCE 103 (282)
Q Consensus 64 RP~l~~FL~~~~~~yei~i~T~~-----~~~Ya~~v~~~ldp~~~ 103 (282)
=|.+.++++.+-+...|+|||.+ .=.|+..+.+.|+-.+.
T Consensus 4 s~~~~~~v~~~i~~~~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~gi 48 (109)
T 3ipz_A 4 TPQLKDTLEKLVNSEKVVLFMKGTRDFPMCGFSNTVVQILKNLNV 48 (109)
T ss_dssp CHHHHHHHHHHHTSSSEEEEESBCSSSBSSHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHccCCEEEEEecCCCCCCChhHHHHHHHHHHcCC
Confidence 36788999999999999999998 68899999999987764
No 258
>2k2w_A Recombination and DNA repair protein; BRCT domain, cell cycle checkpoint; NMR {Xenopus laevis}
Probab=44.09 E-value=23 Score=26.72 Aligned_cols=33 Identities=12% Similarity=0.115 Sum_probs=25.1
Q ss_pred hheeecceeEEeeccCCCCccchhHHHHHHHHhCCeEe
Q 041003 189 QRQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACT 226 (282)
Q Consensus 189 r~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~ 226 (282)
|+++|+|.+++|=. +. ....+...+...||++.
T Consensus 10 ~~~LF~GKtFvFLn--~K---Q~kkl~~aV~~~GG~~~ 42 (118)
T 2k2w_A 10 RKSIFKDKVFLFLN--AK---QYKKLSPAVLFGGGKTD 42 (118)
T ss_dssp CSCSSTTCEEEESC--SS---THHHHHHHHHHTTCEEE
T ss_pred HHhhccCCEEEEeC--HH---HHHHHHHHHHhcCceEE
Confidence 67899999999832 32 25667788888999885
No 259
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=38.53 E-value=12 Score=33.21 Aligned_cols=37 Identities=19% Similarity=0.176 Sum_probs=33.8
Q ss_pred EecccHHHHHHHHh-cCceEEEEcCCcHHHHHHHHhhh
Q 041003 62 KVRSYIRKFLKKAS-KMYDIYLCTTRIRSYAMMMAKLL 98 (282)
Q Consensus 62 ~~RP~l~~FL~~~~-~~yei~i~T~~~~~Ya~~v~~~l 98 (282)
...|+..+.++.+. .-++++|.|+|....+.+++..+
T Consensus 143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 68899999999997 56999999999999999999875
No 260
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=37.97 E-value=16 Score=27.22 Aligned_cols=37 Identities=8% Similarity=0.008 Sum_probs=31.9
Q ss_pred cHHHHHHHHhcCceEEEEcCC-----cHHHHHHHHhhhcCCC
Q 041003 66 YIRKFLKKASKMYDIYLCTTR-----IRSYAMMMAKLLNPKC 102 (282)
Q Consensus 66 ~l~~FL~~~~~~yei~i~T~~-----~~~Ya~~v~~~ldp~~ 102 (282)
++.++++++-+...|+|||.+ .-.|+..+.+.|+-.+
T Consensus 8 ~~~~~v~~~i~~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~g 49 (118)
T 2wem_A 8 GSAEQLDALVKKDKVVVFLKGTPEQPQCGFSNAVVQILRLHG 49 (118)
T ss_dssp -CHHHHHHHHHHSSEEEEESBCSSSBSSHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHhccCCEEEEEecCCCCCccHHHHHHHHHHHHcC
Confidence 467899999998999999998 6889999999998665
No 261
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=37.59 E-value=11 Score=34.32 Aligned_cols=14 Identities=36% Similarity=0.389 Sum_probs=11.5
Q ss_pred eeEEEeCCCceeee
Q 041003 12 LHLVLDLDQTLPHA 25 (282)
Q Consensus 12 l~LVLDLD~TLihs 25 (282)
..+++||||||+.+
T Consensus 4 k~viFD~DGTL~~~ 17 (555)
T 3i28_A 4 RAAVFDLDGVLALP 17 (555)
T ss_dssp CEEEECTBTTTEES
T ss_pred EEEEEecCCeeecc
Confidence 47899999999833
No 262
>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A
Probab=34.31 E-value=42 Score=31.45 Aligned_cols=42 Identities=17% Similarity=0.088 Sum_probs=37.1
Q ss_pred eeEEEEecccHHHHHHHHhcCc-eEEEEcCCcHHHHHHHHhhh
Q 041003 57 ELFLVKVRSYIRKFLKKASKMY-DIYLCTTRIRSYAMMMAKLL 98 (282)
Q Consensus 57 ~~~~v~~RP~l~~FL~~~~~~y-ei~i~T~~~~~Ya~~v~~~l 98 (282)
..-||.+-|.+..+|+++.+.- .+++-|+|.-.|++.+++.+
T Consensus 181 p~kYi~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~ 223 (470)
T 4g63_A 181 LKKYVIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYA 223 (470)
T ss_dssp HHHHEECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHH
T ss_pred HHHHhhCCHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhh
Confidence 4567888999999999998764 69999999999999999885
No 263
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=32.64 E-value=30 Score=25.71 Aligned_cols=38 Identities=18% Similarity=0.164 Sum_probs=32.0
Q ss_pred ccHHHHHHHHhcCceEEEEcCC-----cHHHHHHHHhhhcCCC
Q 041003 65 SYIRKFLKKASKMYDIYLCTTR-----IRSYAMMMAKLLNPKC 102 (282)
Q Consensus 65 P~l~~FL~~~~~~yei~i~T~~-----~~~Ya~~v~~~ldp~~ 102 (282)
|-+.++++.+-+...|+|||.+ .-.|+..+.+.|+-.+
T Consensus 3 ~~~~~~v~~~i~~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~g 45 (121)
T 3gx8_A 3 TEIRKAIEDAIESAPVVLFMKGTPEFPKCGFSRATIGLLGNQG 45 (121)
T ss_dssp HHHHHHHHHHHHSCSEEEEESBCSSSBCTTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhccCCEEEEEeccCCCCCCccHHHHHHHHHHcC
Confidence 4567899999999999999998 5779999998887655
No 264
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=31.67 E-value=46 Score=24.17 Aligned_cols=39 Identities=15% Similarity=0.106 Sum_probs=32.2
Q ss_pred ccHHHHHHHHhcCceEEEEcC-----CcHHHHHHHHhhhcCCCc
Q 041003 65 SYIRKFLKKASKMYDIYLCTT-----RIRSYAMMMAKLLNPKCE 103 (282)
Q Consensus 65 P~l~~FL~~~~~~yei~i~T~-----~~~~Ya~~v~~~ldp~~~ 103 (282)
+-+.++++.+-+...|+|||. ..-.|+..+.+.|+-.+.
T Consensus 3 ~~~~~~v~~~i~~~~Vvlf~kg~~~~~~Cp~C~~ak~~L~~~gi 46 (111)
T 3zyw_A 3 EDLNLRLKKLTHAAPCMLFMKGTPQEPRCGFSKQMVEILHKHNI 46 (111)
T ss_dssp -CHHHHHHHHHTSSSEEEEESBCSSSBSSHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhcCCEEEEEecCCCCCcchhHHHHHHHHHHcCC
Confidence 457889999999999999999 666789999999886663
No 265
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=31.52 E-value=32 Score=24.64 Aligned_cols=38 Identities=13% Similarity=0.172 Sum_probs=32.7
Q ss_pred ccHHHHHHHHhcCceEEEEcCCcHHHHHHHHhhhcCCC
Q 041003 65 SYIRKFLKKASKMYDIYLCTTRIRSYAMMMAKLLNPKC 102 (282)
Q Consensus 65 P~l~~FL~~~~~~yei~i~T~~~~~Ya~~v~~~ldp~~ 102 (282)
+-+.+|++++.+.-.|++||...-.|+..+...|+-.+
T Consensus 6 ~~~~~~~~~~i~~~~v~vy~~~~Cp~C~~~~~~L~~~~ 43 (113)
T 3rhb_A 6 SRMEESIRKTVTENTVVIYSKTWCSYCTEVKTLFKRLG 43 (113)
T ss_dssp CHHHHHHHHHHHHSSEEEEECTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCEEEEECCCChhHHHHHHHHHHcC
Confidence 45788898888777899999999999999999997655
No 266
>4evu_A Putative periplasmic protein YDGH; structural genomics, PSI-biology, program for the characteri secreted effector proteins, pcsep; HET: MSE; 1.45A {Salmonella enterica subsp}
Probab=31.07 E-value=58 Score=22.26 Aligned_cols=35 Identities=14% Similarity=-0.003 Sum_probs=25.7
Q ss_pred heeecceeEEeeccCCCCccchhHHHHHHHHhCCeEe
Q 041003 190 RQILVRCTLFFSRDVDDKEFEFPLLKWRAGELGAACT 226 (282)
Q Consensus 190 ~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~~~Ga~v~ 226 (282)
.++|. +|.+||.+.+...-++.|.+.|...||+..
T Consensus 17 lq~~g--tVsvsg~~~sp~D~~~~lskkAdekGA~~y 51 (72)
T 4evu_A 17 MVPFD--SVKFTGNYGNMTEISYQVAKRAAKKGAKYY 51 (72)
T ss_dssp SCCSE--EEEEEECCSSHHHHHHHHHHHHHHTTCSEE
T ss_pred Ceecc--EEEECCccCChHHHHHHHHHHHHHcCCCEE
Confidence 34554 677888865533346789999999999987
No 267
>1y9j_A SEC1 family domain containing protein 1; membrane traffic, SLY1, SM proteins, snares, protein protein transport; NMR {Rattus norvegicus}
Probab=27.70 E-value=31 Score=27.35 Aligned_cols=44 Identities=16% Similarity=0.204 Sum_probs=33.9
Q ss_pred ccccCCCCCcccccccchhheeecceeEEeeccCCCCccchhHHHHHHH
Q 041003 171 LFFENPVCGDVRCFLGKIQRQILVRCTLFFSRDVDDKEFEFPLLKWRAG 219 (282)
Q Consensus 171 ~ff~~~~~~dvr~iL~~~r~~vl~G~~i~fsg~~~~~~~~~~~l~~~~~ 219 (282)
-||-.+...+|..++++++....+..+|+|+...| +..+.++|+
T Consensus 96 IYfv~Pt~enI~~i~~D~~~~~Y~~y~i~Ft~~i~-----~~lle~LA~ 139 (159)
T 1y9j_A 96 VYFVMPTEENIDRLCQDLRNQLYESYYLNFISAIS-----RSKLEDIAN 139 (159)
T ss_dssp EEEECCCHHHHHHHHHHHHHTCBSEEEEEESSCCC-----HHHHHHHHH
T ss_pred EEEecCCHHHHHHHHHHhhhcccCeEEEEEcCCCC-----HHHHHHHHh
Confidence 34555577788889999988889999999998766 346677776
No 268
>2eel_A Cell death activator CIDE-A; CIDE-N domain, cell death- inducing DFFA-like effector A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.45 E-value=40 Score=24.22 Aligned_cols=18 Identities=28% Similarity=0.278 Sum_probs=14.8
Q ss_pred CCCeeEEEeCCCceeeee
Q 041003 9 QKKLHLVLDLDQTLPHAV 26 (282)
Q Consensus 9 ~~kl~LVLDLD~TLihs~ 26 (282)
....+|||+-|||.|.+.
T Consensus 45 ~~~~~lvLeeDGT~VddE 62 (91)
T 2eel_A 45 TGLVTLVLEEDGTVVDTE 62 (91)
T ss_dssp SSCEEEEETTTCCBCCCH
T ss_pred CCCcEEEEeeCCcEEech
Confidence 447899999999999753
No 269
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=23.78 E-value=65 Score=23.45 Aligned_cols=40 Identities=15% Similarity=0.163 Sum_probs=33.0
Q ss_pred ecccHHHHHHHHhcCceEEEEcCCcHHHHHHH-HhhhcCCC
Q 041003 63 VRSYIRKFLKKASKMYDIYLCTTRIRSYAMMM-AKLLNPKC 102 (282)
Q Consensus 63 ~RP~l~~FL~~~~~~yei~i~T~~~~~Ya~~v-~~~ldp~~ 102 (282)
.-|-..++++++.+...|++||...-.|+..+ ...|+-.+
T Consensus 10 ~~~~~~~~~~~~i~~~~Vvvf~~~~Cp~C~~alk~~L~~~~ 50 (118)
T 3c1r_A 10 VSQETIKHVKDLIAENEIFVASKTYCPYCHAALNTLFEKLK 50 (118)
T ss_dssp SCHHHHHHHHHHHHHSSEEEEECSSCHHHHHHHHHHHTTSC
T ss_pred cCHHHHHHHHHHHccCcEEEEEcCCCcCHHHHHHHHHHHcC
Confidence 34667788888877778999999999999999 88887665
No 270
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=23.21 E-value=58 Score=23.51 Aligned_cols=38 Identities=8% Similarity=0.056 Sum_probs=32.0
Q ss_pred cHHHHHHHHhcCceEEEEcCCcHHHHHHHHhhhcCCCc
Q 041003 66 YIRKFLKKASKMYDIYLCTTRIRSYAMMMAKLLNPKCE 103 (282)
Q Consensus 66 ~l~~FL~~~~~~yei~i~T~~~~~Ya~~v~~~ldp~~~ 103 (282)
-..++++++-+.-.|.|||...-.|+..+.+.|+-.+.
T Consensus 5 ~~~~~~~~~i~~~~v~vy~~~~Cp~C~~ak~~L~~~~i 42 (114)
T 3h8q_A 5 ELRRHLVGLIERSRVVIFSKSYCPHSTRVKELFSSLGV 42 (114)
T ss_dssp HHHHHHHHHHHHCSEEEEECTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhccCCEEEEEcCCCCcHHHHHHHHHHcCC
Confidence 35677888878888999999999999999999987653
No 271
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=22.93 E-value=55 Score=28.89 Aligned_cols=16 Identities=31% Similarity=0.241 Sum_probs=12.9
Q ss_pred CCeeEEEeCCCceeee
Q 041003 10 KKLHLVLDLDQTLPHA 25 (282)
Q Consensus 10 ~kl~LVLDLD~TLihs 25 (282)
++..-|+|+|||||..
T Consensus 24 ~~riAVFD~DgTLi~~ 39 (327)
T 4as2_A 24 KGAYAVFDMDNTSYRY 39 (327)
T ss_dssp SSCEEEECCBTTTEES
T ss_pred CCCEEEEeCCCCeeCC
Confidence 4456799999999964
No 272
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=22.43 E-value=69 Score=23.84 Aligned_cols=40 Identities=10% Similarity=0.137 Sum_probs=34.2
Q ss_pred ecccHHHHHHHHhcCceEEEEcCCcHHHHHHH-HhhhcCCC
Q 041003 63 VRSYIRKFLKKASKMYDIYLCTTRIRSYAMMM-AKLLNPKC 102 (282)
Q Consensus 63 ~RP~l~~FL~~~~~~yei~i~T~~~~~Ya~~v-~~~ldp~~ 102 (282)
.-+-..++++++.+...|+|||...-.|+..+ ...|+..+
T Consensus 22 ~~~~~~~~v~~~i~~~~Vvvy~~~~Cp~C~~a~k~~L~~~~ 62 (129)
T 3ctg_A 22 VSQETVAHVKDLIGQKEVFVAAKTYCPYCKATLSTLFQELN 62 (129)
T ss_dssp CCHHHHHHHHHHHHHSSEEEEECTTCHHHHHHHHHHHTTSC
T ss_pred ccHHHHHHHHHHHcCCCEEEEECCCCCchHHHHHHHHHhcC
Confidence 34568888988887788999999999999999 88888766
No 273
>1f2r_I Inhibitor of caspase-activated DNAse; alpha-beta roll, protein-protein complex, DNA binding protein; NMR {Mus musculus} SCOP: d.15.2.1
Probab=21.73 E-value=99 Score=22.51 Aligned_cols=17 Identities=29% Similarity=0.290 Sum_probs=14.3
Q ss_pred CCeeEEEeCCCceeeee
Q 041003 10 KKLHLVLDLDQTLPHAV 26 (282)
Q Consensus 10 ~kl~LVLDLD~TLihs~ 26 (282)
...+|||+-|||.|.+.
T Consensus 57 ~~~~lvLeeDGT~VddE 73 (100)
T 1f2r_I 57 TPITLVLAEDGTIVDDD 73 (100)
T ss_dssp CSCEEEESSSCCBCCSS
T ss_pred CceEEEEeeCCcEEech
Confidence 45799999999999754
No 274
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=20.80 E-value=35 Score=30.90 Aligned_cols=17 Identities=29% Similarity=0.214 Sum_probs=14.0
Q ss_pred cCCCeeEEEeCCCceee
Q 041003 8 RQKKLHLVLDLDQTLPH 24 (282)
Q Consensus 8 ~~~kl~LVLDLD~TLih 24 (282)
..++..-|+|.|||||.
T Consensus 37 ~~~~~~AVFD~DgTl~~ 53 (385)
T 4gxt_A 37 PDNKPFAVFDWDNTSII 53 (385)
T ss_dssp TTSEEEEEECCTTTTEE
T ss_pred CCCCCEEEEcCCCCeec
Confidence 44567889999999996
Done!