Query 041006
Match_columns 333
No_of_seqs 296 out of 2334
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 04:07:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041006.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041006hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gwg_A 6-phosphogluconate dehy 100.0 3E-84 1E-88 649.9 23.4 318 3-327 118-479 (484)
2 2p4q_A 6-phosphogluconate dehy 100.0 3.4E-73 1.2E-77 572.7 24.8 318 4-327 125-492 (497)
3 2zyd_A 6-phosphogluconate dehy 100.0 1.2E-72 4E-77 566.8 25.8 309 4-320 129-480 (480)
4 2iz1_A 6-phosphogluconate dehy 100.0 4.9E-72 1.7E-76 561.6 28.3 312 3-321 118-473 (474)
5 2pgd_A 6-phosphogluconate dehy 100.0 4.1E-71 1.4E-75 556.0 25.5 316 4-327 117-477 (482)
6 1pgj_A 6PGDH, 6-PGDH, 6-phosph 100.0 1.2E-70 4.1E-75 552.1 26.0 307 4-320 119-476 (478)
7 4e21_A 6-phosphogluconate dehy 100.0 1.8E-33 6.1E-38 272.7 15.4 190 3-235 130-357 (358)
8 3obb_A Probable 3-hydroxyisobu 100.0 8E-29 2.7E-33 234.6 15.2 156 3-176 112-275 (300)
9 4gbj_A 6-phosphogluconate dehy 99.9 3.2E-27 1.1E-31 223.2 16.5 159 3-178 112-272 (297)
10 2zyd_A 6-phosphogluconate dehy 99.9 1.9E-26 6.5E-31 231.3 8.9 175 29-246 290-477 (480)
11 2iz1_A 6-phosphogluconate dehy 99.9 2.8E-26 9.6E-31 229.7 9.0 172 32-246 285-469 (474)
12 2p4q_A 6-phosphogluconate dehy 99.9 6.8E-26 2.3E-30 228.1 8.8 176 28-246 284-482 (497)
13 2pgd_A 6-phosphogluconate dehy 99.9 2.8E-25 9.4E-30 222.9 10.3 172 32-246 281-467 (482)
14 4gwg_A 6-phosphogluconate dehy 99.9 3E-24 1E-28 215.2 7.9 143 64-246 317-469 (484)
15 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.9 3.4E-22 1.2E-26 200.3 8.0 140 65-246 323-473 (478)
16 4dll_A 2-hydroxy-3-oxopropiona 99.9 8.8E-21 3E-25 180.4 16.4 152 3-172 139-291 (320)
17 3pef_A 6-phosphogluconate dehy 99.8 3.3E-20 1.1E-24 173.2 16.7 153 3-172 110-263 (287)
18 3doj_A AT3G25530, dehydrogenas 99.8 5.3E-20 1.8E-24 174.1 16.8 153 3-172 130-283 (310)
19 3pdu_A 3-hydroxyisobutyrate de 99.8 5.2E-20 1.8E-24 171.9 16.1 152 4-172 111-263 (287)
20 3g0o_A 3-hydroxyisobutyrate de 99.8 1.9E-19 6.5E-24 169.6 18.0 153 3-172 117-271 (303)
21 3qha_A Putative oxidoreductase 99.8 9.2E-20 3.1E-24 171.4 13.9 158 3-178 120-286 (296)
22 3l6d_A Putative oxidoreductase 99.8 9.8E-19 3.4E-23 165.2 12.3 150 3-172 116-271 (306)
23 2h78_A Hibadh, 3-hydroxyisobut 99.8 5.1E-18 1.7E-22 159.2 14.8 152 4-172 113-272 (302)
24 1vpd_A Tartronate semialdehyde 99.7 2E-15 6.7E-20 140.9 16.1 152 4-172 115-267 (299)
25 3qsg_A NAD-binding phosphogluc 99.6 3.2E-16 1.1E-20 148.4 10.2 142 6-172 137-280 (312)
26 4ezb_A Uncharacterized conserv 99.6 5.3E-16 1.8E-20 147.4 9.8 151 3-180 136-289 (317)
27 1yb4_A Tartronic semialdehyde 99.6 1.2E-14 4.3E-19 135.1 16.7 152 4-172 112-264 (295)
28 3cky_A 2-hydroxymethyl glutara 99.6 7.8E-15 2.7E-19 137.0 14.3 152 4-172 114-267 (301)
29 4e21_A 6-phosphogluconate dehy 99.6 2.1E-15 7.3E-20 145.8 6.1 100 207-306 204-357 (358)
30 2gf2_A Hibadh, 3-hydroxyisobut 99.6 2.1E-14 7.3E-19 133.7 12.7 152 4-172 110-269 (296)
31 2cvz_A Dehydrogenase, 3-hydrox 99.6 2.6E-14 8.9E-19 132.4 12.9 150 4-172 106-258 (289)
32 2uyy_A N-PAC protein; long-cha 99.5 1.2E-13 4E-18 130.2 16.7 151 4-172 140-292 (316)
33 1i36_A Conserved hypothetical 99.2 4.3E-11 1.5E-15 109.5 11.4 137 9-172 107-244 (264)
34 3g79_A NDP-N-acetyl-D-galactos 99.0 5.9E-10 2E-14 111.4 7.5 140 7-172 174-327 (478)
35 4a7p_A UDP-glucose dehydrogena 99.0 7.2E-10 2.5E-14 109.9 7.5 140 10-172 150-299 (446)
36 3gg2_A Sugar dehydrogenase, UD 98.8 2.6E-09 8.8E-14 106.1 6.3 139 10-172 147-295 (450)
37 3ojo_A CAP5O; rossmann fold, c 98.8 4.6E-09 1.6E-13 103.7 7.0 92 7-105 155-250 (431)
38 3dtt_A NADP oxidoreductase; st 98.7 3.6E-09 1.2E-13 96.3 2.5 70 5-79 160-231 (245)
39 3pid_A UDP-glucose 6-dehydroge 98.7 3.3E-08 1.1E-12 97.6 8.9 91 9-105 172-268 (432)
40 2q3e_A UDP-glucose 6-dehydroge 98.7 1.2E-08 3.9E-13 101.7 5.5 139 6-170 149-304 (467)
41 2o3j_A UDP-glucose 6-dehydroge 98.5 8.3E-08 2.8E-12 95.9 5.0 137 10-172 159-312 (481)
42 2y0c_A BCEC, UDP-glucose dehyd 98.4 4E-07 1.4E-11 90.9 7.0 137 10-172 153-305 (478)
43 1ks9_A KPA reductase;, 2-dehyd 98.3 9.3E-07 3.2E-11 81.0 6.5 130 18-172 129-283 (291)
44 3c24_A Putative oxidoreductase 98.3 1.7E-06 5.8E-11 80.0 7.8 94 5-104 114-227 (286)
45 2ew2_A 2-dehydropantoate 2-red 98.2 3.1E-06 1.1E-10 78.3 7.6 143 6-172 129-304 (316)
46 1mv8_A GMD, GDP-mannose 6-dehy 98.1 2E-06 6.7E-11 84.7 5.5 141 6-172 143-295 (436)
47 1zej_A HBD-9, 3-hydroxyacyl-CO 98.1 4.3E-06 1.5E-10 78.4 7.3 84 4-115 125-211 (293)
48 2qyt_A 2-dehydropantoate 2-red 98.1 5E-06 1.7E-10 77.2 7.4 141 5-171 137-308 (317)
49 1dlj_A UDP-glucose dehydrogena 98.0 2.4E-05 8.2E-10 76.2 9.9 97 8-112 135-243 (402)
50 2ahr_A Putative pyrroline carb 98.0 3.9E-05 1.3E-09 69.5 10.4 88 5-104 104-196 (259)
51 2dpo_A L-gulonate 3-dehydrogen 97.8 4.3E-05 1.5E-09 72.3 8.0 85 5-114 142-230 (319)
52 3d1l_A Putative NADP oxidoredu 97.7 2E-05 6.9E-10 71.7 4.6 90 5-105 117-210 (266)
53 1yqg_A Pyrroline-5-carboxylate 97.7 0.00028 9.4E-09 63.8 11.3 81 6-105 103-196 (263)
54 1jay_A Coenzyme F420H2:NADP+ o 97.5 9.7E-05 3.3E-09 64.6 4.9 69 6-80 125-200 (212)
55 2yjz_A Metalloreductase steap4 96.6 2E-05 6.7E-10 69.6 0.0 61 5-71 116-192 (201)
56 1z82_A Glycerol-3-phosphate de 97.3 7.7E-05 2.6E-09 70.4 2.5 85 11-103 133-238 (335)
57 1evy_A Glycerol-3-phosphate de 97.2 0.00048 1.6E-08 65.5 6.8 70 26-102 168-256 (366)
58 1txg_A Glycerol-3-phosphate de 97.2 0.0023 8E-08 59.5 10.9 70 26-102 151-243 (335)
59 3k96_A Glycerol-3-phosphate de 97.0 0.00081 2.8E-08 64.4 6.7 155 5-176 154-336 (356)
60 3mog_A Probable 3-hydroxybutyr 96.9 0.0011 3.9E-08 66.0 6.9 78 5-106 139-221 (483)
61 2i76_A Hypothetical protein; N 96.6 0.0032 1.1E-07 57.6 7.0 81 8-99 105-190 (276)
62 1yj8_A Glycerol-3-phosphate de 96.6 0.0054 1.9E-07 58.5 8.5 84 11-101 165-273 (375)
63 1x0v_A GPD-C, GPDH-C, glycerol 96.4 0.0082 2.8E-07 56.4 8.1 84 11-101 148-257 (354)
64 3k6j_A Protein F01G10.3, confi 96.3 0.013 4.3E-07 58.1 9.5 79 5-106 185-267 (460)
65 2rcy_A Pyrroline carboxylate r 96.2 0.007 2.4E-07 54.3 6.6 71 23-104 122-197 (262)
66 2vns_A Metalloreductase steap3 95.9 0.0023 8E-08 56.4 1.6 45 21-71 158-204 (215)
67 2izz_A Pyrroline-5-carboxylate 95.9 0.039 1.3E-06 51.5 10.0 138 8-170 138-280 (322)
68 1f0y_A HCDH, L-3-hydroxyacyl-C 95.8 0.022 7.5E-07 52.5 8.0 64 26-104 170-235 (302)
69 4e12_A Diketoreductase; oxidor 95.7 0.024 8.3E-07 51.9 7.8 74 21-111 148-225 (283)
70 3gt0_A Pyrroline-5-carboxylate 95.6 0.03 1E-06 50.1 7.6 79 11-104 121-203 (247)
71 2g5c_A Prephenate dehydrogenas 94.9 0.035 1.2E-06 50.4 5.9 64 9-78 114-190 (281)
72 2raf_A Putative dinucleotide-b 94.8 0.0034 1.2E-07 55.2 -1.0 64 6-75 119-190 (209)
73 2wtb_A MFP2, fatty acid multif 94.8 0.058 2E-06 56.3 7.9 77 5-105 446-526 (725)
74 1wdk_A Fatty oxidation complex 94.4 0.071 2.4E-06 55.5 7.5 77 5-105 448-528 (715)
75 1zcj_A Peroxisomal bifunctiona 94.1 0.12 4.2E-06 50.8 8.3 78 5-106 169-250 (463)
76 3vtf_A UDP-glucose 6-dehydroge 93.8 0.14 4.7E-06 50.4 7.9 136 10-172 166-311 (444)
77 3ktd_A Prephenate dehydrogenas 93.2 0.17 5.9E-06 47.9 7.2 65 6-76 117-202 (341)
78 2f1k_A Prephenate dehydrogenas 92.8 0.12 4.1E-06 46.6 5.3 86 8-104 107-207 (279)
79 3ggo_A Prephenate dehydrogenas 92.8 0.14 4.6E-06 47.8 5.8 63 8-76 145-220 (314)
80 1bg6_A N-(1-D-carboxylethyl)-L 91.8 0.011 3.7E-07 55.4 -3.1 89 75-172 230-324 (359)
81 3b1f_A Putative prephenate deh 91.5 0.21 7.2E-06 45.3 5.3 50 6-61 119-181 (290)
82 2dc1_A L-aspartate dehydrogena 90.6 0.0029 1E-07 56.5 -8.0 67 4-79 100-168 (236)
83 3i83_A 2-dehydropantoate 2-red 86.1 4.8 0.00016 36.9 10.5 61 30-97 155-235 (320)
84 3hwr_A 2-dehydropantoate 2-red 84.8 4.2 0.00015 37.3 9.5 120 27-172 162-306 (318)
85 4huj_A Uncharacterized protein 84.8 0.14 4.8E-06 44.9 -0.7 53 9-68 150-205 (220)
86 2pv7_A T-protein [includes: ch 84.7 0.6 2E-05 42.8 3.5 88 6-104 114-204 (298)
87 3hn2_A 2-dehydropantoate 2-red 80.8 13 0.00044 33.8 11.0 115 31-170 154-295 (312)
88 3tri_A Pyrroline-5-carboxylate 80.6 13 0.00045 33.4 10.9 71 23-104 129-205 (280)
89 3ghy_A Ketopantoate reductase 78.3 6 0.00021 36.5 8.0 61 31-98 174-255 (335)
90 3dfu_A Uncharacterized protein 77.7 4.4 0.00015 36.1 6.5 49 4-65 88-137 (232)
91 3g17_A Similar to 2-dehydropan 77.3 27 0.00091 31.4 11.9 22 150-171 256-277 (294)
92 2i99_A MU-crystallin homolog; 71.2 0.019 6.5E-07 53.6 -11.3 43 4-46 241-292 (312)
93 3obb_A Probable 3-hydroxyisobu 44.3 38 0.0013 30.8 6.3 45 207-257 167-211 (300)
94 4gbj_A 6-phosphogluconate dehy 42.0 44 0.0015 30.2 6.3 45 207-257 168-212 (297)
95 3ado_A Lambda-crystallin; L-gu 37.3 98 0.0034 28.5 7.9 66 31-113 164-229 (319)
96 3n70_A Transport activator; si 33.1 60 0.0021 25.5 5.1 40 31-73 5-46 (145)
97 2lnm_A Protein TIC 40, chlorop 28.3 15 0.0005 25.6 0.4 31 263-294 9-39 (62)
98 2kjq_A DNAA-related protein; s 22.1 41 0.0014 27.0 2.1 40 26-74 18-59 (149)
99 2qz4_A Paraplegin; AAA+, SPG7, 21.3 1.8E+02 0.0062 24.5 6.4 46 29-74 8-62 (262)
100 1hqc_A RUVB; extended AAA-ATPa 20.3 1.4E+02 0.0049 26.2 5.7 45 31-75 16-62 (324)
No 1
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=100.00 E-value=3e-84 Score=649.87 Aligned_cols=318 Identities=47% Similarity=0.792 Sum_probs=293.7
Q ss_pred ccCCccEEecccCCCHHHHhcCCeecccCCHHHHHHHHHHHHHHhccC-CCCCceEEeCCCChhhHHHHHHHHHHHHHHH
Q 041006 3 PVRRVCLISAWGSPGARKARHGPSLMPGGSFEAYNNIQGILQKVAAQV-DDGPCVTYIGEGGSSNFVKMVHNGIEYGDMQ 81 (333)
Q Consensus 3 ~~~G~~~ldapVSGg~~gA~~G~sim~GG~~~a~~~v~pvL~~i~~~~-~~~p~v~~~G~~GaG~~vKlv~N~l~~a~m~ 81 (333)
+++|++|+|+|||||+.+|++|++||+||+++++++++|+|+++++++ ++.||+.|+|+.|+||++||+||++++++|+
T Consensus 118 ~~~Gi~fvd~pVsGg~~gA~~G~~im~GG~~ea~~~v~pll~~ig~~v~~~~~~~~~~G~~Gag~~vKmv~N~i~~~~m~ 197 (484)
T 4gwg_A 118 KAKGILFVGSGVSGGEEGARYGPSLMPGGNKEAWPHIKTIFQGIAAKVGTGEPCCDWVGDEGAGHFVKMVHNGIEYGDMQ 197 (484)
T ss_dssp HHTTCEEEEEEEESHHHHHHHCCEEEEEECGGGHHHHHHHHHHHSCBCTTSCBSBCCCEETTHHHHHHHHHHHHHHHHHH
T ss_pred HhhccccccCCccCCHHHHhcCCeeecCCCHHHHHHHHHHHHHhcCcccCCCceEEEECCccHHHHHHHHHHHHHHHHHH
Confidence 357999999999999999999999999999999999999999999998 8999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHhccchhhhhHHHHHHHHhcccCCCCCchhhHHHHHhhcccCchHHHHHHHHHcC
Q 041006 82 LISEAYYLLKHVGGVSNAELAEIFDEWNKGELESFMVQITADIFKVKDEYGEGELVDKILDKTGMKGTGKWTIQQAAELL 161 (333)
Q Consensus 82 a~AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~i~S~L~~i~~~il~~~d~~~~~~lvd~~~d~~~~k~~~~~~v~~A~~~G 161 (333)
+++|++.|+++..|+|++++.++|+.|+.|.+.|||.+++.+++..+|+ .+.++++.+.|.+.||++++|++++|.++|
T Consensus 198 ~iaEa~~l~~~~~Gld~~~l~~v~~~w~~G~~~S~l~e~~~~~l~~~D~-~g~~~ld~i~d~~~~kgtG~wt~~~A~~~g 276 (484)
T 4gwg_A 198 LICEAYHLMKDVLGMAQDEMAQAFEDWNKTELDSFLIEITANILKFQDT-DGKHLLPKIRDSAGQKGTGKWTAISALEYG 276 (484)
T ss_dssp HHHHHHHHHHHTSCCCHHHHHHHHHHHTTTTTCBHHHHHHHHHHHCBCT-TSSBSGGGSCCCCCSSCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHcCCCccchHHHHHHHHHhcCCc-cCCccHHHHhccccCcchHHHHHHHHHHcC
Confidence 9999999999449999999999999999999999999999999987774 466899999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHhhhhhhhhHHHHhhcccCCcccccccccccchhhHHHHHHHHHHHHHHHhHHHHHHHHHhccCCC
Q 041006 162 IAALTIAGSLDCRYLSGLKEEREEAAKVLKEAGLKDEVQNVGVHVDKKRLIDDVRQALYASKICSYAQGMNLLRSKSNEK 241 (333)
Q Consensus 162 vplP~~~aAl~~r~~s~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrda~~~~~i~syaQG~~ll~~as~~~ 241 (333)
||+|++++|+++|++|++|++|..++++|.+|... .+..|+++|++++|+|+|||||+||+|||++|+++|++|
T Consensus 277 vp~p~i~~av~~R~~S~~k~~r~~a~~~l~~~~~~------~~~~~~~~~~~~~~~al~~~~i~~yaqGf~ll~~as~~~ 350 (484)
T 4gwg_A 277 VPVTLIGEAVFARCLSSLKDERIQASKKLKGPQKF------QFDGDKKSFLEDIRKALYASKIISYAQGFMLLRQAATEF 350 (484)
T ss_dssp CCCHHHHHHHHHHHHHHCHHHHHHHHTTCCCC--C------CCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHhhchHHHHHHHhhcCCCCcc------cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999998766421 344688999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHhhhc----------chhhhccCCCCCCCcCcHHHHHHHHHh---------------------------
Q 041006 242 GWNLNFGELARIWKDG----------INKAYQRNPNLASLVMDPEFAREMVQR--------------------------- 284 (333)
Q Consensus 242 ~w~~~~~~ia~iWr~G----------i~~a~~~~~~l~~ll~~~~~~~~~~~~--------------------------- 284 (333)
+|++|+++|++|||+| |++||++||+|+|||++|+|.+.++++
T Consensus 351 ~w~l~~~~ia~iwr~GciIrs~~l~~i~~a~~~~~~l~~ll~~~~f~~~~~~~~~~~r~vv~~a~~~gip~P~~s~al~y 430 (484)
T 4gwg_A 351 GWTLNYGGIALMWRGGCIIRSVFLGKIKDAFDRNPELQNLLLDDFFKSAVENCQDSWRRAVSTGVQAGIPMPCFTTALSF 430 (484)
T ss_dssp TCCCCHHHHHHHTSTTCTTCBHHHHHHHHHHHHCTTCSCGGGSHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHccCceeHHHHHHHHHHHHHhCCCchhhhcCHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 9999999999999999 899999999999999999999999998
Q ss_pred -----ccCcchhHHHHHhhhhcCccccccCCCCc-ccccccCCCCccCC
Q 041006 285 -----RARLPGNLVQAQRDLFGAHTYERIDRPGS-FHTEWTKLARQTGA 327 (333)
Q Consensus 285 -----~~~lp~~liqaqRd~FGaH~~~r~d~~~~-~h~~w~~~~~~~~~ 327 (333)
+++||+|||||||||||+|||+|+|+||. ||++|++.+++..+
T Consensus 431 ~~~~r~~~lpanliqaqRd~FGaH~~~r~d~~g~~~h~~w~~~~~~~~~ 479 (484)
T 4gwg_A 431 YDGYRHEMLPASLIQAQRDYFGAHTYELLAKPGQFIHTNWTGHGGTVSS 479 (484)
T ss_dssp HHHHTCSCCTHHHHHHHHHHHHCCCEEETTEEEEEECCCCC--------
T ss_pred HHHhccCCCHHHHHHHHHHhhCCcceEecCCCCCccccCcCCCCCCccc
Confidence 89999999999999999999999999995 89999975555444
No 2
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-73 Score=572.71 Aligned_cols=318 Identities=44% Similarity=0.769 Sum_probs=289.5
Q ss_pred cCCccEEecccCCCHHHHhcCCeecccCCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHHHHHHHH
Q 041006 4 VRRVCLISAWGSPGARKARHGPSLMPGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYGDMQLI 83 (333)
Q Consensus 4 ~~G~~~ldapVSGg~~gA~~G~sim~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a~m~a~ 83 (333)
++|++|+++|||||+.+|+.|+++|+||+++++++++|+|+.++.++||+||+.|+|+.|+|+++||+||+++++.|+++
T Consensus 125 ~~g~~~v~~pVsgg~~~a~~G~~im~gg~~e~~~~v~~ll~~~g~~~dGe~~v~~vg~~G~g~~~Kl~~N~~~~~~~~~l 204 (497)
T 2p4q_A 125 KKGILFVGSGVSGGEEGARYGPSLMPGGSEEAWPHIKNIFQSISAKSDGEPCCEWVGPAGAGHYVKMVHNGIEYGDMQLI 204 (497)
T ss_dssp HTTCEEEEEEEESHHHHHHHCCEEEEEECGGGHHHHHHHHHHHSCEETTEESCCCCEETTHHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCceeCCCcccChhHhhcCCeEEecCCHHHHHHHHHHHHHhcCccCCCCceEEECCccHHHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999876688999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHhccchhhhhHHHHHHHHhcccCCCCCchhhHHHHHhhcccCchHHHHHHHHHcCCC
Q 041006 84 SEAYYLLKHVGGVSNAELAEIFDEWNKGELESFMVQITADIFKVKDEYGEGELVDKILDKTGMKGTGKWTIQQAAELLIA 163 (333)
Q Consensus 84 AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~i~S~L~~i~~~il~~~d~~~~~~lvd~~~d~~~~k~~~~~~v~~A~~~Gvp 163 (333)
+|++.|+++.+|++++++.++++.|+.|.+.|++.+++.+++.++|+ ++.+.++.+.|.+.+|+++.|+++.|.++|+|
T Consensus 205 aEa~~l~~~~lGl~~~~~~~~~~~w~~g~~~S~l~~~~~~~l~~~d~-~~~~~vd~i~D~~~~KgtG~~~~~~A~~~Gv~ 283 (497)
T 2p4q_A 205 CEAYDIMKRLGGFTDKEISDVFAKWNNGVLDSFLVEITRDILKFDDV-DGKPLVEKIMDTAGQKGTGKWTAINALDLGMP 283 (497)
T ss_dssp HHHHHHHHHTTCCCHHHHHHHHHHHHTTTTCBHHHHHHHHHHTCBCT-TSSBGGGGSCCCCCCCSHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHccCCCHHHHHHHHHHhcCCccccHHHHHHHHHHhcCCC-CCccHHHHHHHhhccchHHHHHHHHHHHcCCC
Confidence 99999999425999999999999999999999999999888877764 45588999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhhhhhhhhHHHHhhcccCCcccccccccccchhhHHHHHHHHHHHHHHHhHHHHHHHHHhccCCCCC
Q 041006 164 ALTIAGSLDCRYLSGLKEEREEAAKVLKEAGLKDEVQNVGVHVDKKRLIDDVRQALYASKICSYAQGMNLLRSKSNEKGW 243 (333)
Q Consensus 164 lP~~~aAl~~r~~s~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrda~~~~~i~syaQG~~ll~~as~~~~w 243 (333)
+|++..++++|+.|.++++|..+++++.+|.... .+..++++|++++|+++||+||+||+|||++|+++|++|+|
T Consensus 284 ~P~~~~av~ar~~s~~k~~r~~~~~~~~gp~~~~-----~~~~~~~~~~~~v~~al~~~~i~syaqGf~ll~~as~~~~w 358 (497)
T 2p4q_A 284 VTLIGEAVFARCLSALKNERIRASKVLPGPEVPK-----DAVKDREQFVDDLEQALYASKIISYAQGFMLIREAAATYGW 358 (497)
T ss_dssp CHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCT-----TSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CchHHHHHHHHHhhcchhhHHHHhhhcCCCCccc-----ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999987664200 22357899999999999999999999999999999999999
Q ss_pred CCChHHHHHHhhhc----------chhhhccCCCCCCCcCcHHHHHHHHHh-----------------------------
Q 041006 244 NLNFGELARIWKDG----------INKAYQRNPNLASLVMDPEFAREMVQR----------------------------- 284 (333)
Q Consensus 244 ~~~~~~ia~iWr~G----------i~~a~~~~~~l~~ll~~~~~~~~~~~~----------------------------- 284 (333)
++||++|++|||+| |++||++||+|.|||++|+|.+.++++
T Consensus 359 ~l~~~~ia~iwr~GciIrs~~l~~i~~a~~~~~~l~~l~~~~~f~~~~~~~~~~~r~~v~~a~~~gvp~P~~s~aL~~~~ 438 (497)
T 2p4q_A 359 KLNNPAIALMWRGGCIIRSVFLGQITKAYREEPDLENLLFNKFFADAVTKAQSGWRKSIALATTYGIPTPAFSTALSFYD 438 (497)
T ss_dssp CCCHHHHHHHHHSSSTTCBHHHHHHHHHHHHCTTCSCGGGSHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhcCCchHHHHHHHHHHHHhcCCChhhhhcCHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 99999999999999 899999999999999999999999987
Q ss_pred ---ccCcchhHHHHHhhhhcCcccccc--------CCCCcccccccCCCCccCC
Q 041006 285 ---RARLPGNLVQAQRDLFGAHTYERI--------DRPGSFHTEWTKLARQTGA 327 (333)
Q Consensus 285 ---~~~lp~~liqaqRd~FGaH~~~r~--------d~~~~~h~~w~~~~~~~~~ 327 (333)
+++||+|||||||||||+|||+|+ |++|.||++|++.++++.+
T Consensus 439 ~~~~~~~~a~liqa~Rd~FG~H~~~r~~~~~~~~~~~~~~~h~~w~~~~~~~~~ 492 (497)
T 2p4q_A 439 GYRSERLPANLLQAQRDYFGAHTFRVLPECASDNLPVDKDIHINWTGHGGNVSS 492 (497)
T ss_dssp HHTCSSCTHHHHHHHHHHHSCCCBCCCGGGCCSSSCTTSCBCCCCC--------
T ss_pred hcccCCchhHHHHHHHHhcCCcceeeccccccccCCCCCeeecccCCCCCcccc
Confidence 999999999999999999999999 9999999999865544443
No 3
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=100.00 E-value=1.2e-72 Score=566.82 Aligned_cols=309 Identities=51% Similarity=0.805 Sum_probs=288.8
Q ss_pred cCCccEEecccCCCHHHHhcCCeecccCCHHHHHHHHHHHHHHhccC-CCCCceEEeCCCChhhHHHHHHHHHHHHHHHH
Q 041006 4 VRRVCLISAWGSPGARKARHGPSLMPGGSFEAYNNIQGILQKVAAQV-DDGPCVTYIGEGGSSNFVKMVHNGIEYGDMQL 82 (333)
Q Consensus 4 ~~G~~~ldapVSGg~~gA~~G~sim~GG~~~a~~~v~pvL~~i~~~~-~~~p~v~~~G~~GaG~~vKlv~N~l~~a~m~a 82 (333)
++|++|+++|||||+.+|+.|+++|+||+++++++++|+|+.++.++ ||+||+.|+|+.|+|+++||++|+++++.+++
T Consensus 129 ~~g~~~v~~pv~gg~~~a~~g~~i~~gg~~~~~~~v~~ll~~~g~~~~dGe~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~ 208 (480)
T 2zyd_A 129 AEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQL 208 (480)
T ss_dssp HTTCEEEEEEEESHHHHHHHCCEEEEESCHHHHHHHHHHHHHHSCBCTTSCBSBCCCBSTTHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCCeeCCccccCHhHHhcCCeEEecCCHHHHHHHHHHHHHHhccccCCCceEEEECCccHHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999875 79999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHhccchhhhhHHHHHHHHhcccCCCCCchhhHHHHHhhcccCchHHHHHHHHHcCC
Q 041006 83 ISEAYYLLKHVGGVSNAELAEIFDEWNKGELESFMVQITADIFKVKDEYGEGELVDKILDKTGMKGTGKWTIQQAAELLI 162 (333)
Q Consensus 83 ~AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~i~S~L~~i~~~il~~~d~~~~~~lvd~~~d~~~~k~~~~~~v~~A~~~Gv 162 (333)
++|++.|+++..|++++++.++++.|+.|.+.|++.+++.+++.++|+ .+.+.++.+.|.+.+|++++|+++.|.++|+
T Consensus 209 laEa~~l~~~~lGl~~~~~~~l~~~w~~g~~~s~l~~~~~~~l~~~d~-~~~~~v~~i~D~~~~k~tG~~~~~~A~~~gv 287 (480)
T 2zyd_A 209 IAEAYSLLKGGLNLTNEELAQTFTEWNNGELSSYLIDITKDIFTKKDE-DGNYLVDVILDEAANKGTGKWTSQSALDLGE 287 (480)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHTTTCBHHHHHHHHHHHCBCT-TSSBGGGGBCCCCCCCSCTTHHHHHHHHHTC
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHhcCCCcccHHHHHHHHHHhcCCC-CCcchHHHHHHHhcCchHHHHHHHHHHHcCC
Confidence 999999999425999999999999999999999999999898877664 4558899999988999999999999999999
Q ss_pred ChhHHHHHHHHHHHhhhhhhhhHHHHhhcccCCcccccccccccchhhHHHHHHHHHHHHHHHhHHHHHHHHHhccCCCC
Q 041006 163 AALTIAGSLDCRYLSGLKEEREEAAKVLKEAGLKDEVQNVGVHVDKKRLIDDVRQALYASKICSYAQGMNLLRSKSNEKG 242 (333)
Q Consensus 163 plP~~~aAl~~r~~s~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrda~~~~~i~syaQG~~ll~~as~~~~ 242 (333)
|+|++..++++|+.+.++++|..++.++.+|.. .+..++++|++++|+++||+||+||||||++|+++|++|+
T Consensus 288 ~~Pi~~~av~ar~~s~~k~~R~~~~~~~~g~~~-------~~~~~~~~~~~~v~~al~~~~~~syaqGf~ll~~as~~~~ 360 (480)
T 2zyd_A 288 PLSLITESVFARYISSLKDQRVAASKVLSGPQA-------QPAGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASEEYN 360 (480)
T ss_dssp CCHHHHHHHHHHHHHTCHHHHHHHHTTCCCCCC-------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCchHHHHHHHHhhhcchhhhHHhhcccCCCCC-------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999998876642 2235889999999999999999999999999999999999
Q ss_pred CCCChHHHHHHhhhc----------chhhhccCCCCCCCcCcHHHHHHHHHh----------------------------
Q 041006 243 WNLNFGELARIWKDG----------INKAYQRNPNLASLVMDPEFAREMVQR---------------------------- 284 (333)
Q Consensus 243 w~~~~~~ia~iWr~G----------i~~a~~~~~~l~~ll~~~~~~~~~~~~---------------------------- 284 (333)
|++||++|++|||+| |++||++||+|+|||++|+|.+.++++
T Consensus 361 w~l~~~~ia~iwr~GciIrs~~l~~i~~a~~~~~~l~~l~~~~~f~~~~~~~~~~~r~~v~~a~~~gvp~p~~s~al~~~ 440 (480)
T 2zyd_A 361 WDLNYGEIAKIFRAGCIIRAQFLQKITDACAENPQIANLLLAPYFKQIADDYQQALRDVVAYAVQNGIPVPTFSAAVAYY 440 (480)
T ss_dssp CCCCHHHHHHHTSSSSTTCBTHHHHHHHHHHHCTTCSCGGGSHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHhcCcchHHHHHHHHHHHHhcCCChHhhhcCHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 999999999999999 899999999999999999999999987
Q ss_pred ----ccCcchhHHHHHhhhhcCccccccCCCCcccccccC
Q 041006 285 ----RARLPGNLVQAQRDLFGAHTYERIDRPGSFHTEWTK 320 (333)
Q Consensus 285 ----~~~lp~~liqaqRd~FGaH~~~r~d~~~~~h~~w~~ 320 (333)
+++||+|||||||||||+|||+|+|++|.||++|++
T Consensus 441 ~~~~~~~~~~~l~qa~Rd~FG~H~~~r~~~~~~~h~~w~~ 480 (480)
T 2zyd_A 441 DSYRAAVLPANLIQAQRDYFGAHTYKRIDKEGVFHTEWLD 480 (480)
T ss_dssp HHHTCSSCTHHHHHHHHHHHHCCCBCBSSSCSCBCCCC--
T ss_pred HhcccCCchhhHHHHHHHhcCCCcceecCCCCcccCCCCC
Confidence 899999999999999999999999999999999963
No 4
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=100.00 E-value=4.9e-72 Score=561.60 Aligned_cols=312 Identities=49% Similarity=0.838 Sum_probs=289.7
Q ss_pred ccCCccEEecccCCCHHHHhcCCeecccCCHHHHHHHHHHHHHHhccC--CCCCceEEeCCCChhhHHHHHHHHHHHHHH
Q 041006 3 PVRRVCLISAWGSPGARKARHGPSLMPGGSFEAYNNIQGILQKVAAQV--DDGPCVTYIGEGGSSNFVKMVHNGIEYGDM 80 (333)
Q Consensus 3 ~~~G~~~ldapVSGg~~gA~~G~sim~GG~~~a~~~v~pvL~~i~~~~--~~~p~v~~~G~~GaG~~vKlv~N~l~~a~m 80 (333)
+++|++|+++||+||+.+|+.|+++|+||+++++++++|+|+.++.++ +|+||+.|+|+.|+|+++||+||++.++.+
T Consensus 118 ~~~g~~~v~~pv~gg~~~a~~g~~i~~gg~~~~~~~v~~ll~~~g~~~~~dge~~~~~~g~~g~g~~~Kl~~N~~~~~~~ 197 (474)
T 2iz1_A 118 ADSGINFIGTGVSGGEKGALLGPSMMPGGQKEAYDLVAPIFEQIAAKAPQDGKPCVAYMGANGAGHYVKMVHNGIEYGDM 197 (474)
T ss_dssp TTSSCEEEEEEECSHHHHHHHCCCEEEEECHHHHHHHHHHHHHHSCBCTTTCCBSBCCCBSTTHHHHHHHHHHHHHHHHH
T ss_pred HHCCCeEECCCCCCChhhhccCCeEEecCCHHHHHHHHHHHHHHhcccccCCCceEEEECCccHHHHHHHHHhHHHHHHH
Confidence 356899999999999999999999999999999999999999999985 799999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHhccchhhhhHHHHHHHHhcccCCCCCchhhHHHHHhhcccCchHHHHHHHHHc
Q 041006 81 QLISEAYYLLKHVGGVSNAELAEIFDEWNKGELESFMVQITADIFKVKDEYGEGELVDKILDKTGMKGTGKWTIQQAAEL 160 (333)
Q Consensus 81 ~a~AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~i~S~L~~i~~~il~~~d~~~~~~lvd~~~d~~~~k~~~~~~v~~A~~~ 160 (333)
++++|++.++++..|++++++.+++..|+.|.+.||+.+++.+++..+|+..+.+.++.+.|.+.+|++++|+++.|.++
T Consensus 198 ~~laEa~~l~~~~~Gl~~~~~~~l~~~w~~g~~~s~l~~~~~~~l~~~d~~~g~~~vd~i~D~~~~k~tG~~~~~~A~~~ 277 (474)
T 2iz1_A 198 QLIAESYDLLKRILGLSNAEIQAIFEEWNEGELDSYLIEITKEVLKRKDDEGEGYIVDKILDKAGNKGTGKWTSESALDL 277 (474)
T ss_dssp HHHHHHHHHHHHTSCCCHHHHHHHHHHHTTTTTCBHHHHHHHHHTTCBCSSSSSBGGGGBCSCCCCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHhcCCCccccHHHhhhhHhhcCCCCCChhHHHHHHHhhcccchHHHHHHHHHHc
Confidence 99999999999426999999999999999999999999999888776653233388999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHhhhhhhhhHHHHhhcccCCcccccccccccchhhHHHHHHHHHHHHHHHhHHHHHHHHHhccCC
Q 041006 161 LIAALTIAGSLDCRYLSGLKEEREEAAKVLKEAGLKDEVQNVGVHVDKKRLIDDVRQALYASKICSYAQGMNLLRSKSNE 240 (333)
Q Consensus 161 GvplP~~~aAl~~r~~s~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrda~~~~~i~syaQG~~ll~~as~~ 240 (333)
|+|+|++..++++|+.|.++++|..+++++.+|.. .+..++++|++++|+++||+||+||+|||++|+++|++
T Consensus 278 gv~~P~~~~av~ar~~s~~k~~r~~~~~~~~g~~~-------~~~~~~~~~~~~v~~al~~~~~~~yaqGf~ll~~a~~~ 350 (474)
T 2iz1_A 278 GVPLPLITESVFARYISTYKDERVKASKVLSGPAL-------DFSGDKKEVIEKIRKALYFSKIMSYAQGFAQLRKASEE 350 (474)
T ss_dssp TCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCC-------CCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCchHHHHHHHHHhhhhhhhhHHhhhccCCCCC-------cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999876642 22358899999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHhhhc----------chhhhccCCCCCCCcCcHHHHHHHHHh--------------------------
Q 041006 241 KGWNLNFGELARIWKDG----------INKAYQRNPNLASLVMDPEFAREMVQR-------------------------- 284 (333)
Q Consensus 241 ~~w~~~~~~ia~iWr~G----------i~~a~~~~~~l~~ll~~~~~~~~~~~~-------------------------- 284 (333)
|+|++||++|++|||+| |++||++||+|.|||++|+|.+.++++
T Consensus 351 ~~~~l~~~~ia~~wr~Gciirs~~l~~i~~a~~~~~~l~~l~~~~~~~~~~~~~~~~~r~~v~~a~~~~~p~p~~s~al~ 430 (474)
T 2iz1_A 351 FDWDLPYGTIAQIWRAGCIIRAEFLQNITDAFDKDSELENLLLDDYFVDITKRYQEAVRDVVSLAVQAGTPIPTFTSAIS 430 (474)
T ss_dssp HTCCCCHHHHHHHTSSSCTTCBTTHHHHHHHHHHCTTCCCGGGSHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHH
T ss_pred cCCCCCHHHHHHHHhccchHHHHHHHHHHHHHhcCCChhhhhcCHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 99999999999999999 899999999999999999999999987
Q ss_pred ------ccCcchhHHHHHhhhhcCccccccCCCCcccccccCC
Q 041006 285 ------RARLPGNLVQAQRDLFGAHTYERIDRPGSFHTEWTKL 321 (333)
Q Consensus 285 ------~~~lp~~liqaqRd~FGaH~~~r~d~~~~~h~~w~~~ 321 (333)
+++||+|||||||||||+|||+|+|++|.||++|+++
T Consensus 431 ~~~~~~~~~~~~~l~qa~rd~fg~h~~~r~~~~~~~h~~w~~~ 473 (474)
T 2iz1_A 431 YYDSYRSENLPANLIQAQRDYFGAHTYERTDKAGIFHYDWYTE 473 (474)
T ss_dssp HHHHHTCSSCTHHHHHHHHHHHHCCCBCBSSSSSCBCCCCC--
T ss_pred HHHhcccCCchhhHHHHHHHhcCCccceecCCCCeeeccCCCC
Confidence 9999999999999999999999999999999999863
No 5
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=100.00 E-value=4.1e-71 Score=555.98 Aligned_cols=316 Identities=48% Similarity=0.794 Sum_probs=291.3
Q ss_pred cCCccEEecccCCCHHHHhcCCeecccCCHHHHHHHHHHHHHHhccC-CCCCceEEeCCCChhhHHHHHHHHHHHHHHHH
Q 041006 4 VRRVCLISAWGSPGARKARHGPSLMPGGSFEAYNNIQGILQKVAAQV-DDGPCVTYIGEGGSSNFVKMVHNGIEYGDMQL 82 (333)
Q Consensus 4 ~~G~~~ldapVSGg~~gA~~G~sim~GG~~~a~~~v~pvL~~i~~~~-~~~p~v~~~G~~GaG~~vKlv~N~l~~a~m~a 82 (333)
++|++|+++||+|++.+++.|+++|+||+++++++++|+|+.++.++ +++||+.++|+.|+|+++||++|++.++.+++
T Consensus 117 ~~g~~~v~~pv~g~~~~a~~g~~i~~gg~~e~~~~v~~ll~~~g~~v~d~~~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~ 196 (482)
T 2pgd_A 117 DKGILFVGSGVSGGEDGARYGPSLMPGGNKEAWPHIKAIFQGIAAKVGTGEPCCDWVGDDGAGHFVKMVHNGIEYGDMQL 196 (482)
T ss_dssp HTTCEEEEEEEESHHHHHHHCCEEEEEECTTTHHHHHHHHHHHSCBCTTSCBSCCCCEETTHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCeEeCCCCCCChhhhccCCeEEeCCCHHHHHHHHHHHHHhhhhccCCCcceEEECCCcHHHHHHHHHHHHHHHHHHH
Confidence 35899999999999999999999999999999999999999999987 78999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CCCHHHHHHHHHHhccchhhhhHHHHHHHHhcccCCCCCchhhHHHHHhhcccCchHHHHHHHHHcC
Q 041006 83 ISEAYYLLKHVG-GVSNAELAEIFDEWNKGELESFMVQITADIFKVKDEYGEGELVDKILDKTGMKGTGKWTIQQAAELL 161 (333)
Q Consensus 83 ~AEg~~Ll~~~~-Gld~~~ia~I~~~w~~G~i~S~L~~i~~~il~~~d~~~~~~lvd~~~d~~~~k~~~~~~v~~A~~~G 161 (333)
++|++.|+++ . |++++++.+++..|+.|...|++.+++..++..+++ .+.+.++.++|.+.+|+|++|+++.|.++|
T Consensus 197 i~Ea~~l~~~-~~G~~~~~~~~~~~~w~~g~~~S~l~~~~~~~l~~~d~-~~~~~ld~i~d~~~~k~t~~~~~~~A~~~G 274 (482)
T 2pgd_A 197 ICEAYHLMKD-VLGLGHKEMAKAFEEWNKTELDSFLIEITASILKFQDA-DGKHLLPKIRDSAGQKGTGKWTAISALEYG 274 (482)
T ss_dssp HHHHHHHHHH-TSCCCHHHHHHHHHHHTTTTTCBHHHHHHHHHHHCBCT-TSSBSGGGSCCCCCCCSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHh-cCCcCHHHHHHHHHHhcCCCcCchHHHHHhHHhhccCC-CCCeeecccccccccccHHHHHHHHHHHcC
Confidence 9999999996 7 999999999999999998889999999887877763 455788999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHhhhhhhhhHHHHhhcccCCcccccccccccchhhHHHHHHHHHHHHHHHhHHHHHHHHHhccCCC
Q 041006 162 IAALTIAGSLDCRYLSGLKEEREEAAKVLKEAGLKDEVQNVGVHVDKKRLIDDVRQALYASKICSYAQGMNLLRSKSNEK 241 (333)
Q Consensus 162 vplP~~~aAl~~r~~s~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrda~~~~~i~syaQG~~ll~~as~~~ 241 (333)
+|+|++.+++.+|+.+.+|++|..++.++.+|... .+..|+++|++++|+|+||+||+||+|||++|+++|++|
T Consensus 275 v~~P~i~~av~~~~~s~~k~~r~~~~~~~~g~~~~------~~~~~~~~~~~~v~~al~~~~~~syaqGf~ll~~as~~~ 348 (482)
T 2pgd_A 275 VPVTLIGEAVFARCLSSLKDERIQASKKLKGPQNI------PFEGDKKSFLEDIRKALYASKIISYAQGFMLLRQAATEF 348 (482)
T ss_dssp CCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCC------CCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHhhhhhhhHHHHHhhhcCCCCcc------ccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999988899999999999999999998776411 233588999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHhhhc----------chhhhccCCCCCCCcCcHHHHHHHHHh---------------------------
Q 041006 242 GWNLNFGELARIWKDG----------INKAYQRNPNLASLVMDPEFAREMVQR--------------------------- 284 (333)
Q Consensus 242 ~w~~~~~~ia~iWr~G----------i~~a~~~~~~l~~ll~~~~~~~~~~~~--------------------------- 284 (333)
+|++||++|++|||+| |++||++||+|+|||++|+|.+.++++
T Consensus 349 ~w~l~~~~ia~~wr~Gciirs~~l~~i~~a~~~~~~l~~l~~~~~~~~~~~~~~~~~r~~v~~a~~~g~p~p~~s~al~~ 428 (482)
T 2pgd_A 349 GWTLNYGGIALMWRGGCIIRSVFLGKIKDAFDRNPGLQNLLLDDFFKSAVENCQDSWRRAISTGVQAGIPMPCFTTALSF 428 (482)
T ss_dssp TCCCCHHHHHHHTTSSSTTCBTHHHHHHHHHHHCTTCSCGGGSHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHhcCcchHHHHHHHHHHHHhcCCChhhhhcCHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 9999999999999999 899999999999999999999999987
Q ss_pred -----ccCcchhHHHHHhhhhcCccccccCCCC-cccccccCCCCccCC
Q 041006 285 -----RARLPGNLVQAQRDLFGAHTYERIDRPG-SFHTEWTKLARQTGA 327 (333)
Q Consensus 285 -----~~~lp~~liqaqRd~FGaH~~~r~d~~~-~~h~~w~~~~~~~~~ 327 (333)
+++||+|||||||||||+|||+|+|+|| .||++|++.++++.+
T Consensus 429 ~~~~~~~~~~~~l~qa~rd~fG~h~~~r~~~~~~~~h~~w~~~~~~~~~ 477 (482)
T 2pgd_A 429 YDGYRHAMLPANLIQAQRDYFGAHTYELLAKPGQFIHTNWTGHGGSVSS 477 (482)
T ss_dssp HHHHHCSSCTHHHHHHHHHHHHCCCBCCSSSTTCCBCCCCSCSCC----
T ss_pred HHhcccCCcchhHHHHHHhhcCCceeeecCCCCCceecccCCCCCcccc
Confidence 9999999999999999999999999999 999999765444443
No 6
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=100.00 E-value=1.2e-70 Score=552.09 Aligned_cols=307 Identities=31% Similarity=0.557 Sum_probs=285.0
Q ss_pred cCCccEEecccCCCHHHHhcCCeecccCCHHHHHHHHHHHHHHhccC-CCCCceEEeCCCChhhHHHHHHHHHHHHHHHH
Q 041006 4 VRRVCLISAWGSPGARKARHGPSLMPGGSFEAYNNIQGILQKVAAQV-DDGPCVTYIGEGGSSNFVKMVHNGIEYGDMQL 82 (333)
Q Consensus 4 ~~G~~~ldapVSGg~~gA~~G~sim~GG~~~a~~~v~pvL~~i~~~~-~~~p~v~~~G~~GaG~~vKlv~N~l~~a~m~a 82 (333)
++|++|+++||+||+.+++.|+++|+||+++++++++|+|+.++.++ +|+||+.++|+.|+|+++|+++|++.++.+++
T Consensus 119 ~~g~~~v~~pv~gg~~~a~~g~~i~~gg~~~~~~~v~~ll~~~g~~~~dg~~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~ 198 (478)
T 1pgj_A 119 AAGLRFLGMGISGGEEGARKGPAFFPGGTLSVWEEIRPIVEAAAAKADDGRPCVTMNGSGGAGSCVKMYHNSGEYAILQI 198 (478)
T ss_dssp TTTCEEEEEEEESHHHHHHHCCEEEEEECHHHHHHHHHHHHHHSCBCTTSCBSCCCCCSTTHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCeEEEeeccCCHHHHhcCCeEeccCCHHHHHHHHHHHHHhcccccCCCeeEEEeCCchHHHHHhhHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999875 78999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHhc-cchhhhhHHHHHHHHhcccCCCCCchhhHHHHHhhcccCchHHHHHHHHHcC
Q 041006 83 ISEAYYLLKHVGGVSNAELAEIFDEWN-KGELESFMVQITADIFKVKDEYGEGELVDKILDKTGMKGTGKWTIQQAAELL 161 (333)
Q Consensus 83 ~AEg~~Ll~~~~Gld~~~ia~I~~~w~-~G~i~S~L~~i~~~il~~~d~~~~~~lvd~~~d~~~~k~~~~~~v~~A~~~G 161 (333)
++|++.++++ .|++++++.+++..|+ .|.+.|++.+++..++.++|+ .+.+.++.+.|.+.+|++++|+++.|.++|
T Consensus 199 i~Ea~~l~~~-~G~~~~~~~~l~~~w~~~g~~~s~l~~~~~~~l~~~d~-~G~~~ld~i~D~~~~kgtg~~~~~~A~~~G 276 (478)
T 1pgj_A 199 WGEVFDILRA-MGLNNDEVAAVLEDWKSKNFLKSYMLDISIAAARAKDK-DGSYLTEHVMDRIGSKGTGLWSAQEALEIG 276 (478)
T ss_dssp HHHHHHHHHH-TTCCHHHHHHHHHHHHHTSTTCBHHHHHHHHHHHCBCT-TSSBGGGGBCCCCCCCSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHH-cCCCHHHHHHHHHHhccCCCcCchHHHhhchhhhcCCC-CChhHHHHHHHHhcCccHHHHHHHHHHHhC
Confidence 9999999995 9999999999999999 888889999999888876663 333788888898899999999999999999
Q ss_pred CChhHHHHHHHHHHHhhhhhhhhHHHHhhcccCC-cccccccccc-cch---hhHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 041006 162 IAALTIAGSLDCRYLSGLKEEREEAAKVLKEAGL-KDEVQNVGVH-VDK---KRLIDDVRQALYASKICSYAQGMNLLRS 236 (333)
Q Consensus 162 vplP~~~aAl~~r~~s~~~~~r~~~~~~~~~~~~-~~~~~~~~~~-~~~---~~~~~~lrda~~~~~i~syaQG~~ll~~ 236 (333)
||+|++.+++++|+++..+++|..+++++.+|.. . .+. .|+ +.|++++|+|+|||||+||+|||++|++
T Consensus 277 v~~Pi~~~av~~r~ls~~~~~r~~~~~~l~~~~~~~------~~~~~~~~~~~~~~~~~~~al~~~~~~~yaqg~~~~~~ 350 (478)
T 1pgj_A 277 VPAPSLNMAVVSRQFTMYKTERQANASNAPGITQSP------GYTLKNKSPSGPEIKQLYDSVCIAIISCYAQMFQCLRE 350 (478)
T ss_dssp CCCHHHHHHHHHHHHHHTHHHHHHHHHHSTTTTCCC------CCCCSCCSTTSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHhCCCCHHHHHHHhcCCCCccc------ccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999876641 1 122 466 8999999999999999999999999999
Q ss_pred ccCCCCCCCChHHHHHHhhhc----------chhhhccCCCCCCCcCcHHHHHHHHHh----------------------
Q 041006 237 KSNEKGWNLNFGELARIWKDG----------INKAYQRNPNLASLVMDPEFAREMVQR---------------------- 284 (333)
Q Consensus 237 as~~~~w~~~~~~ia~iWr~G----------i~~a~~~~~~l~~ll~~~~~~~~~~~~---------------------- 284 (333)
+|++|+|++||++|++|||+| |++||++||+|.||| |+|.+.++++
T Consensus 351 a~~~~~w~l~~~~~a~~wr~gciir~~~l~~i~~a~~~~~~~~~l~--~~~~~~~~~~~~~~r~~v~~~~~~~g~~~p~~ 428 (478)
T 1pgj_A 351 MDKVHNFGLNLPATIATFRAGCILQGYLLKPMTEAFEKNPNISNLM--CAFQTEIRAGLQNYRDMVALITSKLEVSIPVL 428 (478)
T ss_dssp HHHHHCCCCCHHHHHHTTSSSSTTCBTTHHHHHHHHHHCTTCSCTT--GGGHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred HHHHcCCCCCHHHHHHHHcCCceeeHHHHHHHHHHHhcCCChhhHH--HHHHHHHHHHHHHHHHHHHHHHHHcCCChHHH
Confidence 999999999999999999999 899999999999999 9999999986
Q ss_pred -----------ccCcc-hhHHHHHhhhhcCccccccCCCCcccccccC
Q 041006 285 -----------RARLP-GNLVQAQRDLFGAHTYERIDRPGSFHTEWTK 320 (333)
Q Consensus 285 -----------~~~lp-~~liqaqRd~FGaH~~~r~d~~~~~h~~w~~ 320 (333)
+++|| +|||||||||||+|||+|+|++|.||++|++
T Consensus 429 ~~~l~y~d~~~~~~l~~~~l~qaqrd~fg~h~~~~~~~~~~~h~~w~~ 476 (478)
T 1pgj_A 429 SASLNYVTAMFTPTLKYGQLVSLQRDVFGRHGYERVDKDGRESFQWPE 476 (478)
T ss_dssp HHHHHHHHHHTCSCCTHHHHHHHHHHHHHCCCEEBSSSSSEECCCCCC
T ss_pred HHHHHHHHHhccccCCcchhHHHHHHhccCceeeecCCCCceecCCCC
Confidence 99999 9999999999999999999999999999975
No 7
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=100.00 E-value=1.8e-33 Score=272.68 Aligned_cols=190 Identities=25% Similarity=0.453 Sum_probs=154.9
Q ss_pred ccCCccEEecccCCCHHHHhcCCeecccCCHHHHHHHHHHHHHHhccCCCCC--------------ceEEeCCCChhhHH
Q 041006 3 PVRRVCLISAWGSPGARKARHGPSLMPGGSFEAYNNIQGILQKVAAQVDDGP--------------CVTYIGEGGSSNFV 68 (333)
Q Consensus 3 ~~~G~~~ldapVSGg~~gA~~G~sim~GG~~~a~~~v~pvL~~i~~~~~~~p--------------~v~~~G~~GaG~~v 68 (333)
+++|++|+|+|||||+.+|+.|++||+||+++++++++|+|+.++++.++.| +++|+|+.|+|+++
T Consensus 130 ~~~g~~~vdapVsGg~~~a~~G~~im~GG~~~a~~~~~~ll~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~g~~~ 209 (358)
T 4e21_A 130 RAQGITYVDVGTSGGIFGLERGYCLMIGGEKQAVERLDPVFRTLAPGIGAAPRTPGREKREGTAELGYLHCGPSGAGHFV 209 (358)
T ss_dssp HTTTCEEEEEEEECGGGHHHHCCEEEEESCHHHHHHTHHHHHHHSCCGGGSCCCTTGGGCCSSGGGTEEEEESTTHHHHH
T ss_pred HHCCCEEEeCCCCCCHHHHhcCCeeeecCCHHHHHHHHHHHHHhccccccCcccccccccccccccceEEECCccHHHHH
Confidence 4679999999999999999999999999999999999999999996533222 79999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-----------------------CCCCHHHHHHHHHHhccch-hhhhHHHHHHHH
Q 041006 69 KMVHNGIEYGDMQLISEAYYLLKHV-----------------------GGVSNAELAEIFDEWNKGE-LESFMVQITADI 124 (333)
Q Consensus 69 Klv~N~l~~a~m~a~AEg~~Ll~~~-----------------------~Gld~~~ia~I~~~w~~G~-i~S~L~~i~~~i 124 (333)
|+++|+++++.|++++|++.|+++. |++|+++|+++ |+.|| +.||+++++.++
T Consensus 210 Kl~~n~l~~~~i~~~aE~~~la~~a~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~~~---~~~g~~~~s~~l~~~~~~ 286 (358)
T 4e21_A 210 KMVHNGIEYGLMAAYAEGLNILHHANAGKEGQGADAETAPLRNPDFYRYDLDLADITEV---WRRGSVISSWLLDLSATA 286 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTCC--------------CGGGCCCCCCHHHHHHH---HTTTSTTCBHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccchhcccCCCHHHHHHH---HhCccHHHHHHHHHHHHH
Confidence 9999999999999999999999962 38999999888 99999 569999999899
Q ss_pred hcccCCCCCchhhHHHHHhhcccCchHHHHHHHHHcCCChhHHHHHHHHHHHhhhhhhhhHHHHhhcccCCccccccccc
Q 041006 125 FKVKDEYGEGELVDKILDKTGMKGTGKWTIQQAAELLIAALTIAGSLDCRYLSGLKEEREEAAKVLKEAGLKDEVQNVGV 204 (333)
Q Consensus 125 l~~~d~~~~~~lvd~~~d~~~~k~~~~~~v~~A~~~GvplP~~~aAl~~r~~s~~~~~r~~~~~~~~~~~~~~~~~~~~~ 204 (333)
|.+++. .. .+.+....+++++|++.+|.+.|||+|++++|+++||.+ +.+|.++++++|
T Consensus 287 ~~~~p~-~~-----~~~~~~~d~g~~r~~~~~A~~~gvp~p~~~~al~~~~~s--~~~~~~~~~l~~------------- 345 (358)
T 4e21_A 287 LLDSPD-LQ-----EFQGRVSDSGEGRWTVAAAIDEGVPAHVLSSALYERFSS--RGEDDFANRLLS------------- 345 (358)
T ss_dssp HHHCTT-CT-----TC--CCCCCSHHHHHHHHHHHHTCCCHHHHHHHHHHHHH--TTTTHHHHHHHH-------------
T ss_pred HhhCCC-hH-----HHHHHHHhcCcHHHHHHHHHHcCCChHHHHHHHHHHHHH--CCCcccHHHHHH-------------
Confidence 987642 11 122333456788999999999999999999999988887 677888776655
Q ss_pred ccchhhHHHHHHHHHHHHHHHhHHHHHHHHH
Q 041006 205 HVDKKRLIDDVRQALYASKICSYAQGMNLLR 235 (333)
Q Consensus 205 ~~~~~~~~~~lrda~~~~~i~syaQG~~ll~ 235 (333)
+|||+| |.|+.+
T Consensus 346 ---------a~r~~f----------G~h~~~ 357 (358)
T 4e21_A 346 ---------AMRYEF----------GGHREK 357 (358)
T ss_dssp ---------HHC-------------------
T ss_pred ---------HHHHhc----------CCCCCC
Confidence 999999 999864
No 8
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.96 E-value=8e-29 Score=234.64 Aligned_cols=156 Identities=19% Similarity=0.200 Sum_probs=133.8
Q ss_pred ccCCccEEecccCCCHHHHhcCC-eecccCCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHHHHHH
Q 041006 3 PVRRVCLISAWGSPGARKARHGP-SLMPGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYGDMQ 81 (333)
Q Consensus 3 ~~~G~~~ldapVSGg~~gA~~G~-sim~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a~m~ 81 (333)
+++|++|||||||||+.+|++|+ +||+||++++|++++|+|++|+++ ++|+|+.|+|+.+|++||.+.++.++
T Consensus 112 ~~~G~~~lDaPVsGg~~~A~~G~L~imvGG~~~~~~~~~p~l~~~g~~------i~~~G~~G~g~~~Kl~~N~l~~~~~~ 185 (300)
T 3obb_A 112 RERGLAMLDAPVSGGTAGAAAGTLTFMVGGDAEALEKARPLFEAMGRN------IFHAGPDGAGQVAKVCNNQLLAVLMI 185 (300)
T ss_dssp HTTTCEEEECCEESCHHHHHHTCEEEEEESCHHHHHHHHHHHHHHEEE------EEEEESTTHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCEEEecCCCCCHHHHHhCCEEEEEeCCHHHHHHHHHHHHHhCCC------EEEeCCccHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999 999999999999999999999997 99999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHhccchhhhhHHHHHHH-------HhcccCCCCCchhhHHHHHhhcccCchHHHH
Q 041006 82 LISEAYYLLKHVGGVSNAELAEIFDEWNKGELESFMVQITAD-------IFKVKDEYGEGELVDKILDKTGMKGTGKWTI 154 (333)
Q Consensus 82 a~AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~i~S~L~~i~~~-------il~~~d~~~~~~lvd~~~d~~~~k~~~~~~v 154 (333)
+++|++.|+++ .|+|++++.++ ++.+...|+..+...+ ....++ +.+.|.++...+ |.++++
T Consensus 186 a~aEa~~la~~-~Gld~~~~~~v---l~~~~~~s~~~~~~~p~~~~~~~~~~~~~-~~~~f~~~l~~K------Dl~l~~ 254 (300)
T 3obb_A 186 GTAEAMALGVA-NGLEAKVLAEI---MRRSSGGNWALEVYNPWPGVMENAPASRD-YSGGFMAQLMAK------DLGLAQ 254 (300)
T ss_dssp HHHHHHHHHHH-TTCCHHHHHHH---HHTSTTCCHHHHHCCCSTTTSTTSGGGGT-TCSSSBHHHHHH------HHHHHH
T ss_pred HHHHHHHHHHh-cCCCHHHHHHH---HHhCcccchHHHhhccccchhhhcccccc-CCccchHHHHHH------HHHHHH
Confidence 99999999995 99999999999 8888777777664422 122333 245566666553 689999
Q ss_pred HHHHHcCCChhHHHHHHHHHHH
Q 041006 155 QQAAELLIAALTIAGSLDCRYL 176 (333)
Q Consensus 155 ~~A~~~GvplP~~~aAl~~r~~ 176 (333)
++|.+.|+|+|+...+.. +|.
T Consensus 255 ~~A~~~g~~~p~~~~a~~-~~~ 275 (300)
T 3obb_A 255 EAAQASASSTPMGSLALS-LYR 275 (300)
T ss_dssp HHHHHHTCCCHHHHHHHH-HHH
T ss_pred HHHHHcCCCChHHHHHHH-HHH
Confidence 999999999998877654 443
No 9
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.95 E-value=3.2e-27 Score=223.16 Aligned_cols=159 Identities=16% Similarity=0.145 Sum_probs=138.2
Q ss_pred ccCCccEEecccCCCHHHHhcCC-eecccCCHHHHHHHHHHHHHHhccCCCCCceEEeCC-CChhhHHHHHHHHHHHHHH
Q 041006 3 PVRRVCLISAWGSPGARKARHGP-SLMPGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGE-GGSSNFVKMVHNGIEYGDM 80 (333)
Q Consensus 3 ~~~G~~~ldapVSGg~~gA~~G~-sim~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~-~GaG~~vKlv~N~l~~a~m 80 (333)
+++|++|||+|||||+.+|+.|+ ++|+||++++|++++|+|+.++.+ ++|+|+ .|+|+.+|++||.+.++.+
T Consensus 112 ~~~g~~~ldapVsGg~~~a~~g~l~im~gG~~~~~~~~~~~l~~~g~~------i~~~g~~~G~g~~~Kl~~N~~~~~~~ 185 (297)
T 4gbj_A 112 EWYGAHYVGAPIFARPEAVRAKVGNICLSGNAGAKERIKPIVENFVKG------VFDFGDDPGAANVIKLAGNFMIACSL 185 (297)
T ss_dssp HHTTCEEEECCEECCHHHHHHTCCEEEEEECHHHHHHHHHHHHTTCSE------EEECCSCTTHHHHHHHHHHHHHHHHH
T ss_pred HhcCCceecCCcCCCccccccccceeecccchhHHHHHHHHHHHhhCC------eEEecCCccHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999 999999999999999999999987 899995 7999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHhccchhhhhHHHHHHHHhcccCCCCCchhhHHHHHhhcccCchHHHHHHHHHc
Q 041006 81 QLISEAYYLLKHVGGVSNAELAEIFDEWNKGELESFMVQITADIFKVKDEYGEGELVDKILDKTGMKGTGKWTIQQAAEL 160 (333)
Q Consensus 81 ~a~AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~i~S~L~~i~~~il~~~d~~~~~~lvd~~~d~~~~k~~~~~~v~~A~~~ 160 (333)
++++|++.|+++ +|+|++++.++ |+.+...|++.+...+.+..+++.+..|.++...+ |.+++++.|.+.
T Consensus 186 ~~~aEa~~la~~-~Gld~~~~~~~---l~~~~~~s~~~~~~~~~~~~~~~~p~~f~~~l~~K------Dl~l~~~~A~~~ 255 (297)
T 4gbj_A 186 EMMGEAFTMAEK-NGISRQSIYEM---LTSTLFAAPIFQNYGKLVASNTYEPVAFRFPLGLK------DINLTLQTASDV 255 (297)
T ss_dssp HHHHHHHHHHHH-TTCCHHHHHHH---HHTTTTCSHHHHHHHHHHHHTCCCSCSSBHHHHHH------HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH-cCCCHHHHHHH---HHhhcccCchhhccCccccCCCCCCccchhHHHHH------HHHHHHHHHHHh
Confidence 999999999995 99999999998 88888889888877766666664333566666553 689999999999
Q ss_pred CCChhHHHHHHHHHHHhh
Q 041006 161 LIAALTIAGSLDCRYLSG 178 (333)
Q Consensus 161 GvplP~~~aAl~~r~~s~ 178 (333)
|+|+|+...+.. +|..+
T Consensus 256 g~~~p~~~~~~~-~~~~a 272 (297)
T 4gbj_A 256 NAPMPFADIIRN-RFISG 272 (297)
T ss_dssp TCCCHHHHHHHH-HHHHH
T ss_pred CCCChHHHHHHH-HHHHH
Confidence 999998766544 44433
No 10
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.93 E-value=1.9e-26 Score=231.30 Aligned_cols=175 Identities=12% Similarity=0.134 Sum_probs=147.8
Q ss_pred ccCCHHHHHHHHHHHHHHhccCCCCCceEEeCCC-----ChhhHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCCCCH
Q 041006 29 PGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEG-----GSSNFVKMVHNGIEYGDMQLISEAYYLLKH-----VGGVSN 98 (333)
Q Consensus 29 ~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~-----GaG~~vKlv~N~l~~a~m~a~AEg~~Ll~~-----~~Gld~ 98 (333)
|-.+..+|.++.|.++....... -.+.||. ++++++|+|||+|++++|++|||||.|+++ +|+||+
T Consensus 290 Pi~~~av~ar~~s~~k~~R~~~~----~~~~g~~~~~~~~~~~~~~~v~~al~~~~~~syaqGf~ll~~as~~~~w~l~~ 365 (480)
T 2zyd_A 290 SLITESVFARYISSLKDQRVAAS----KVLSGPQAQPAGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASEEYNWDLNY 365 (480)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHH----TTCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCH
T ss_pred chHHHHHHHHhhhcchhhhHHhh----cccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCH
Confidence 33366778898888876543210 1244543 889999999999999999999999999997 499999
Q ss_pred HHHHHHHHHhccchhh-hhHHHHHHHHhcccCCCCCchhhHHHHHhhcccCc--hHHHHHHHHHcCCChhHHHHHHHHHH
Q 041006 99 AELAEIFDEWNKGELE-SFMVQITADIFKVKDEYGEGELVDKILDKTGMKGT--GKWTIQQAAELLIAALTIAGSLDCRY 175 (333)
Q Consensus 99 ~~ia~I~~~w~~G~i~-S~L~~i~~~il~~~d~~~~~~lvd~~~d~~~~k~~--~~~~v~~A~~~GvplP~~~aAl~~r~ 175 (333)
.+|++| |++||++ |++++...++|.+++ ...++++++.|....++.. .+|++..|.+.|||+|++++|+. |
T Consensus 366 ~~ia~i---wr~GciIrs~~l~~i~~a~~~~~-~l~~l~~~~~f~~~~~~~~~~~r~~v~~a~~~gvp~p~~s~al~--~ 439 (480)
T 2zyd_A 366 GEIAKI---FRAGCIIRAQFLQKITDACAENP-QIANLLLAPYFKQIADDYQQALRDVVAYAVQNGIPVPTFSAAVA--Y 439 (480)
T ss_dssp HHHHHH---TSSSSTTCBTHHHHHHHHHHHCT-TCSCGGGSHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHH--H
T ss_pred HHHHHH---HhcCcchHHHHHHHHHHHHhcCC-ChHhhhcCHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH--H
Confidence 999999 9999998 766664458898876 4678889998887766554 67799999999999999999999 9
Q ss_pred HhhhhhhhhHHHHhhcccCCcccccccccccchhhHHHHHHHHHHHHHHHhHHHHHHHHHhccCCCCCCCC
Q 041006 176 LSGLKEEREEAAKVLKEAGLKDEVQNVGVHVDKKRLIDDVRQALYASKICSYAQGMNLLRSKSNEKGWNLN 246 (333)
Q Consensus 176 ~s~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrda~~~~~i~syaQG~~ll~~as~~~~w~~~ 246 (333)
+++++++|+++|.+ | +|||+| |.|+|+|.|++..||++
T Consensus 440 ~~~~~~~~~~~~l~-q----------------------a~Rd~F----------G~H~~~r~~~~~~~h~~ 477 (480)
T 2zyd_A 440 YDSYRAAVLPANLI-Q----------------------AQRDYF----------GAHTYKRIDKEGVFHTE 477 (480)
T ss_dssp HHHHTCSSCTHHHH-H----------------------HHHHHH----------HCCCBCBSSSCSCBCCC
T ss_pred HHhcccCCchhhHH-H----------------------HHHHhc----------CCCcceecCCCCcccCC
Confidence 99999999999877 5 999999 99999999999999999
No 11
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.93 E-value=2.8e-26 Score=229.70 Aligned_cols=172 Identities=11% Similarity=0.184 Sum_probs=146.4
Q ss_pred CHHHHHHHHHHHHHHhccCCCCCceEEeCCC-----ChhhHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCCCCHHHH
Q 041006 32 SFEAYNNIQGILQKVAAQVDDGPCVTYIGEG-----GSSNFVKMVHNGIEYGDMQLISEAYYLLKH-----VGGVSNAEL 101 (333)
Q Consensus 32 ~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~-----GaG~~vKlv~N~l~~a~m~a~AEg~~Ll~~-----~~Gld~~~i 101 (333)
+..+|.++.|.++...... .-.+.||. ++++++|+|||+|++++|++|||||.|+++ +|++|+.+|
T Consensus 285 ~~av~ar~~s~~k~~r~~~----~~~~~g~~~~~~~~~~~~~~~v~~al~~~~~~~yaqGf~ll~~a~~~~~~~l~~~~i 360 (474)
T 2iz1_A 285 TESVFARYISTYKDERVKA----SKVLSGPALDFSGDKKEVIEKIRKALYFSKIMSYAQGFAQLRKASEEFDWDLPYGTI 360 (474)
T ss_dssp HHHHHHHHHHHCHHHHHHH----HHHCCCCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHH
T ss_pred HHHHHHHHhhhhhhhhHHh----hhccCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHH
Confidence 6778899988887554321 01344544 889999999999999999999999999997 499999999
Q ss_pred HHHHHHhccchhh-hhHHHHHHHHhcccCCCCCchhhHHHHHhhcccC--chHHHHHHHHHcCCChhHHHHHHHHHHHhh
Q 041006 102 AEIFDEWNKGELE-SFMVQITADIFKVKDEYGEGELVDKILDKTGMKG--TGKWTIQQAAELLIAALTIAGSLDCRYLSG 178 (333)
Q Consensus 102 a~I~~~w~~G~i~-S~L~~i~~~il~~~d~~~~~~lvd~~~d~~~~k~--~~~~~v~~A~~~GvplP~~~aAl~~r~~s~ 178 (333)
++| |++||++ |.+++...++|.+++ ...++++++.|....++. ..+|++..|.+.|||+|++++|+. |+++
T Consensus 361 a~~---wr~Gciirs~~l~~i~~a~~~~~-~l~~l~~~~~~~~~~~~~~~~~r~~v~~a~~~~~p~p~~s~al~--~~~~ 434 (474)
T 2iz1_A 361 AQI---WRAGCIIRAEFLQNITDAFDKDS-ELENLLLDDYFVDITKRYQEAVRDVVSLAVQAGTPIPTFTSAIS--YYDS 434 (474)
T ss_dssp HHH---TSSSCTTCBTTHHHHHHHHHHCT-TCCCGGGSHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHH--HHHH
T ss_pred HHH---HhccchHHHHHHHHHHHHHhcCC-ChhhhhcCHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH--HHHh
Confidence 999 9999998 655554448888776 467889999888777654 367799999999999999999999 9999
Q ss_pred hhhhhhHHHHhhcccCCcccccccccccchhhHHHHHHHHHHHHHHHhHHHHHHHHHhccCCCCCCCC
Q 041006 179 LKEEREEAAKVLKEAGLKDEVQNVGVHVDKKRLIDDVRQALYASKICSYAQGMNLLRSKSNEKGWNLN 246 (333)
Q Consensus 179 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrda~~~~~i~syaQG~~ll~~as~~~~w~~~ 246 (333)
++++|+++|.+ | +|||+| |.|+|+|.|++..||++
T Consensus 435 ~~~~~~~~~l~-q----------------------a~rd~f----------g~h~~~r~~~~~~~h~~ 469 (474)
T 2iz1_A 435 YRSENLPANLI-Q----------------------AQRDYF----------GAHTYERTDKAGIFHYD 469 (474)
T ss_dssp HTCSSCTHHHH-H----------------------HHHHHH----------HCCCBCBSSSSSCBCCC
T ss_pred cccCCchhhHH-H----------------------HHHHhc----------CCccceecCCCCeeecc
Confidence 99999999877 5 999999 99999999999999999
No 12
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.92 E-value=6.8e-26 Score=228.11 Aligned_cols=176 Identities=15% Similarity=0.218 Sum_probs=148.3
Q ss_pred cccCCHHHHHHHHHHHHHHhccCCCCCceEEeCCC-------ChhhHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCC
Q 041006 28 MPGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEG-------GSSNFVKMVHNGIEYGDMQLISEAYYLLKH-----VGG 95 (333)
Q Consensus 28 m~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~-------GaG~~vKlv~N~l~~a~m~a~AEg~~Ll~~-----~~G 95 (333)
++-.+..+|.++.|.++...... .-.+.||. ++++++|+|||+|++++|++|||||.|+++ +|+
T Consensus 284 ~P~~~~av~ar~~s~~k~~r~~~----~~~~~gp~~~~~~~~~~~~~~~~v~~al~~~~i~syaqGf~ll~~as~~~~w~ 359 (497)
T 2p4q_A 284 VTLIGEAVFARCLSALKNERIRA----SKVLPGPEVPKDAVKDREQFVDDLEQALYASKIISYAQGFMLIREAAATYGWK 359 (497)
T ss_dssp CHHHHHHHHHHHHHHCHHHHHHH----HHHCCCCCCCTTSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CchHHHHHHHHHhhcchhhHHHH----hhhcCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 34456678899988887654321 01344554 479999999999999999999999999997 499
Q ss_pred CCHHHHHHHHHHhccchhh-hhHHHHHHHHhcccCCCCCchhhHHHHHhhcccCc--hHHHHHHHHHcCCChhHHHHHHH
Q 041006 96 VSNAELAEIFDEWNKGELE-SFMVQITADIFKVKDEYGEGELVDKILDKTGMKGT--GKWTIQQAAELLIAALTIAGSLD 172 (333)
Q Consensus 96 ld~~~ia~I~~~w~~G~i~-S~L~~i~~~il~~~d~~~~~~lvd~~~d~~~~k~~--~~~~v~~A~~~GvplP~~~aAl~ 172 (333)
||+.+|++| |++||++ |++++...++|.+++ ...++++++.|....++.. .+|++..|.+.|||+|++++|+.
T Consensus 360 l~~~~ia~i---wr~GciIrs~~l~~i~~a~~~~~-~l~~l~~~~~f~~~~~~~~~~~r~~v~~a~~~gvp~P~~s~aL~ 435 (497)
T 2p4q_A 360 LNNPAIALM---WRGGCIIRSVFLGQITKAYREEP-DLENLLFNKFFADAVTKAQSGWRKSIALATTYGIPTPAFSTALS 435 (497)
T ss_dssp CCHHHHHHH---HHSSSTTCBHHHHHHHHHHHHCT-TCSCGGGSHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHH
T ss_pred CCHHHHHHH---HhcCCchHHHHHHHHHHHHhcCC-ChhhhhcCHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 999999999 9999998 766664558998776 4678889998887766554 67799999999999999999999
Q ss_pred HHHHhhhhhhhhHHHHhhcccCCcccccccccccchhhHHHHHHHHHHHHHHHhHHHHHHHHHhc--------cCCCCCC
Q 041006 173 CRYLSGLKEEREEAAKVLKEAGLKDEVQNVGVHVDKKRLIDDVRQALYASKICSYAQGMNLLRSK--------SNEKGWN 244 (333)
Q Consensus 173 ~r~~s~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrda~~~~~i~syaQG~~ll~~a--------s~~~~w~ 244 (333)
|+++++++|+++|++ | +|||+| |.|+|+|. |++..||
T Consensus 436 --~~~~~~~~~~~a~li-q----------------------a~Rd~F----------G~H~~~r~~~~~~~~~~~~~~~h 480 (497)
T 2p4q_A 436 --FYDGYRSERLPANLL-Q----------------------AQRDYF----------GAHTFRVLPECASDNLPVDKDIH 480 (497)
T ss_dssp --HHHHHTCSSCTHHHH-H----------------------HHHHHH----------SCCCBCCCGGGCCSSSCTTSCBC
T ss_pred --HHHhcccCCchhHHH-H----------------------HHHHhc----------CCcceeeccccccccCCCCCeee
Confidence 999999999999877 5 999999 99999999 9998999
Q ss_pred CC
Q 041006 245 LN 246 (333)
Q Consensus 245 ~~ 246 (333)
++
T Consensus 481 ~~ 482 (497)
T 2p4q_A 481 IN 482 (497)
T ss_dssp CC
T ss_pred cc
Confidence 99
No 13
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.92 E-value=2.8e-25 Score=222.93 Aligned_cols=172 Identities=13% Similarity=0.157 Sum_probs=143.6
Q ss_pred CHHHHHHHHHHHHHHhccCCCCCceEEeCCC-Ch-----hhHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCCCCHHH
Q 041006 32 SFEAYNNIQGILQKVAAQVDDGPCVTYIGEG-GS-----SNFVKMVHNGIEYGDMQLISEAYYLLKH-----VGGVSNAE 100 (333)
Q Consensus 32 ~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~-Ga-----G~~vKlv~N~l~~a~m~a~AEg~~Ll~~-----~~Gld~~~ 100 (333)
..++|.++.+.++...... .-.+.||. ++ ++++|+|||+|++++|++|||||.|+++ +|+||+.+
T Consensus 281 ~~av~~~~~s~~k~~r~~~----~~~~~g~~~~~~~~~~~~~~~~v~~al~~~~~~syaqGf~ll~~as~~~~w~l~~~~ 356 (482)
T 2pgd_A 281 GEAVFARCLSSLKDERIQA----SKKLKGPQNIPFEGDKKSFLEDIRKALYASKIISYAQGFMLLRQAATEFGWTLNYGG 356 (482)
T ss_dssp HHHHHHHHHHHCHHHHHHH----HHHCCCCCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHH
T ss_pred HHHHHHHhhhhhhhHHHHH----hhhcCCCCccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHH
Confidence 3678888888876544321 01344554 33 8999999999999999999999999997 78999999
Q ss_pred HHHHHHHhccchhh-hhHHHHHHHHhcccCCCCCchhhHHHHHhhcccC--chHHHHHHHHHcCCChhHHHHHHHHHHHh
Q 041006 101 LAEIFDEWNKGELE-SFMVQITADIFKVKDEYGEGELVDKILDKTGMKG--TGKWTIQQAAELLIAALTIAGSLDCRYLS 177 (333)
Q Consensus 101 ia~I~~~w~~G~i~-S~L~~i~~~il~~~d~~~~~~lvd~~~d~~~~k~--~~~~~v~~A~~~GvplP~~~aAl~~r~~s 177 (333)
|++| |++||++ |.+++...++|.+++ ...++++++.|....++. ..+|++..|.+.|||+|++++|+. |++
T Consensus 357 ia~~---wr~Gciirs~~l~~i~~a~~~~~-~l~~l~~~~~~~~~~~~~~~~~r~~v~~a~~~g~p~p~~s~al~--~~~ 430 (482)
T 2pgd_A 357 IALM---WRGGCIIRSVFLGKIKDAFDRNP-GLQNLLLDDFFKSAVENCQDSWRRAISTGVQAGIPMPCFTTALS--FYD 430 (482)
T ss_dssp HHHH---TTSSSTTCBTHHHHHHHHHHHCT-TCSCGGGSHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHH--HHH
T ss_pred HHHH---HhcCcchHHHHHHHHHHHHhcCC-ChhhhhcCHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH--HHH
Confidence 9999 9999998 655554448888776 467888888777666654 367799999999999999999998 999
Q ss_pred hhhhhhhHHHHhhcccCCcccccccccccchhhHHHHHHHHHHHHHHHhHHHHHHHHHhccCCC-CCCCC
Q 041006 178 GLKEEREEAAKVLKEAGLKDEVQNVGVHVDKKRLIDDVRQALYASKICSYAQGMNLLRSKSNEK-GWNLN 246 (333)
Q Consensus 178 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrda~~~~~i~syaQG~~ll~~as~~~-~w~~~ 246 (333)
+++++|+++|++ | +|||+| |.|+|+|.|++. .||++
T Consensus 431 ~~~~~~~~~~l~-q----------------------a~rd~f----------G~h~~~r~~~~~~~~h~~ 467 (482)
T 2pgd_A 431 GYRHAMLPANLI-Q----------------------AQRDYF----------GAHTYELLAKPGQFIHTN 467 (482)
T ss_dssp HHHCSSCTHHHH-H----------------------HHHHHH----------HCCCBCCSSSTTCCBCCC
T ss_pred hcccCCcchhHH-H----------------------HHHhhc----------CCceeeecCCCCCceecc
Confidence 999999999888 5 999999 999999999987 79999
No 14
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.90 E-value=3e-24 Score=215.16 Aligned_cols=143 Identities=15% Similarity=0.260 Sum_probs=130.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCCCCHHHHHHHHHHhccchhh-hh-HHHHHHHHhcccCCCCCchh
Q 041006 64 SSNFVKMVHNGIEYGDMQLISEAYYLLKH-----VGGVSNAELAEIFDEWNKGELE-SF-MVQITADIFKVKDEYGEGEL 136 (333)
Q Consensus 64 aG~~vKlv~N~l~~a~m~a~AEg~~Ll~~-----~~Gld~~~ia~I~~~w~~G~i~-S~-L~~i~~~il~~~d~~~~~~l 136 (333)
..+++|++||+|++++|++|||||.|+++ +|+||+.+|++| |++|||+ |. |.+|+ ++|.+++ ...+++
T Consensus 317 ~~~~~~~~~~al~~~~i~~yaqGf~ll~~as~~~~w~l~~~~ia~i---wr~GciIrs~~l~~i~-~a~~~~~-~l~~ll 391 (484)
T 4gwg_A 317 KKSFLEDIRKALYASKIISYAQGFMLLRQAATEFGWTLNYGGIALM---WRGGCIIRSVFLGKIK-DAFDRNP-ELQNLL 391 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHH---TSTTCTTCBHHHHHHH-HHHHHCT-TCSCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHH---HccCceeHHHHHHHHH-HHHHhCC-Cchhhh
Confidence 47899999999999999999999999996 799999999999 9999988 64 55555 8998876 467899
Q ss_pred hHHHHHhhcccCchHH--HHHHHHHcCCChhHHHHHHHHHHHhhhhhhhhHHHHhhcccCCcccccccccccchhhHHHH
Q 041006 137 VDKILDKTGMKGTGKW--TIQQAAELLIAALTIAGSLDCRYLSGLKEEREEAAKVLKEAGLKDEVQNVGVHVDKKRLIDD 214 (333)
Q Consensus 137 vd~~~d~~~~k~~~~~--~v~~A~~~GvplP~~~aAl~~r~~s~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (333)
+++.|....++...+| ++..|.+.|||+|++++|+. |+++++++|+|+|++ | +
T Consensus 392 ~~~~f~~~~~~~~~~~r~vv~~a~~~gip~P~~s~al~--y~~~~r~~~lpanli-q----------------------a 446 (484)
T 4gwg_A 392 LDDFFKSAVENCQDSWRRAVSTGVQAGIPMPCFTTALS--FYDGYRHEMLPASLI-Q----------------------A 446 (484)
T ss_dssp GSHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHH--HHHHHTCSCCTHHHH-H----------------------H
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH--HHHHhccCCCHHHHH-H----------------------H
Confidence 9999999888888999 99999999999999999999 999999999999876 5 9
Q ss_pred HHHHHHHHHHHhHHHHHHHHHhccCCCC-CCCC
Q 041006 215 VRQALYASKICSYAQGMNLLRSKSNEKG-WNLN 246 (333)
Q Consensus 215 lrda~~~~~i~syaQG~~ll~~as~~~~-w~~~ 246 (333)
|||+| |.|+|+|.|+++. ||++
T Consensus 447 qRd~F----------GaH~~~r~d~~g~~~h~~ 469 (484)
T 4gwg_A 447 QRDYF----------GAHTYELLAKPGQFIHTN 469 (484)
T ss_dssp HHHHH----------HCCCEEETTEEEEEECCC
T ss_pred HHHhh----------CCcceEecCCCCCccccC
Confidence 99999 9999999999876 6999
No 15
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.86 E-value=3.4e-22 Score=200.28 Aligned_cols=140 Identities=10% Similarity=0.141 Sum_probs=128.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCCCCHHHHHHHHHHhccchhh--hhHHHHHHHHhcccCCCCCchhh
Q 041006 65 SNFVKMVHNGIEYGDMQLISEAYYLLKH-----VGGVSNAELAEIFDEWNKGELE--SFMVQITADIFKVKDEYGEGELV 137 (333)
Q Consensus 65 G~~vKlv~N~l~~a~m~a~AEg~~Ll~~-----~~Gld~~~ia~I~~~w~~G~i~--S~L~~i~~~il~~~d~~~~~~lv 137 (333)
..+++.++++++++.+.+|+|||.|+++ +|+||+.+|+.| |++|||+ .||.+|+ ++|.+++ ...+++
T Consensus 323 ~~~~~~~~~al~~~~~~~yaqg~~~~~~a~~~~~w~l~~~~~a~~---wr~gciir~~~l~~i~-~a~~~~~-~~~~l~- 396 (478)
T 1pgj_A 323 GPEIKQLYDSVCIAIISCYAQMFQCLREMDKVHNFGLNLPATIAT---FRAGCILQGYLLKPMT-EAFEKNP-NISNLM- 396 (478)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHT---TSSSSTTCBTTHHHHH-HHHHHCT-TCSCTT-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHH---HcCCceeeHHHHHHHH-HHHhcCC-ChhhHH-
Confidence 6899999999999999999999999997 899999999999 9999999 5888887 8888775 356666
Q ss_pred HHHHHhhcccCchHH--HHHH-HHHcCCChhHHHHHHHHHHHhhhhhhhhH-HHHhhcccCCcccccccccccchhhHHH
Q 041006 138 DKILDKTGMKGTGKW--TIQQ-AAELLIAALTIAGSLDCRYLSGLKEEREE-AAKVLKEAGLKDEVQNVGVHVDKKRLID 213 (333)
Q Consensus 138 d~~~d~~~~k~~~~~--~v~~-A~~~GvplP~~~aAl~~r~~s~~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (333)
+.|...+++....| ++.. |...|+|+|++++|+. |+++|+++|+| +|++ |
T Consensus 397 -~~~~~~~~~~~~~~r~~v~~~~~~~g~~~p~~~~~l~--y~d~~~~~~l~~~~l~-q---------------------- 450 (478)
T 1pgj_A 397 -CAFQTEIRAGLQNYRDMVALITSKLEVSIPVLSASLN--YVTAMFTPTLKYGQLV-S---------------------- 450 (478)
T ss_dssp -GGGHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH--HHHHHTCSCCTHHHHH-H----------------------
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH--HHHHhccccCCcchhH-H----------------------
Confidence 77777787778888 8888 9999999999999999 99999999999 9988 5
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHhccCCCCCCCC
Q 041006 214 DVRQALYASKICSYAQGMNLLRSKSNEKGWNLN 246 (333)
Q Consensus 214 ~lrda~~~~~i~syaQG~~ll~~as~~~~w~~~ 246 (333)
+|||+| |.|+|+|.|+++.||++
T Consensus 451 aqrd~f----------g~h~~~~~~~~~~~h~~ 473 (478)
T 1pgj_A 451 LQRDVF----------GRHGYERVDKDGRESFQ 473 (478)
T ss_dssp HHHHHH----------HCCCEEBSSSSSEECCC
T ss_pred HHHHhc----------cCceeeecCCCCceecC
Confidence 999999 99999999999999999
No 16
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.85 E-value=8.8e-21 Score=180.38 Aligned_cols=152 Identities=18% Similarity=0.192 Sum_probs=132.3
Q ss_pred ccCCccEEecccCCCHHHHhcCC-eecccCCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHHHHHH
Q 041006 3 PVRRVCLISAWGSPGARKARHGP-SLMPGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYGDMQ 81 (333)
Q Consensus 3 ~~~G~~~ldapVSGg~~gA~~G~-sim~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a~m~ 81 (333)
+++|++|+|+||+|++.+|+.|+ ++|+||+++++++++|+|+.+ .+ ++|+|+.|+|+.+|+++|.+.++.++
T Consensus 139 ~~~g~~~~~~pv~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~-~~------~~~~g~~g~a~~~Kl~~N~~~~~~~~ 211 (320)
T 4dll_A 139 GALGIAHLDTPVSGGTVGAEQGTLVIMAGGKPADFERSLPLLKVF-GR------ATHVGPHGSGQLTKLANQMIVGITIG 211 (320)
T ss_dssp HHTTCEEEECCEECHHHHHHHTCEEEEEESCHHHHHHHHHHHHHH-EE------EEEEESTTHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCEEEeCCCcCCHhHHhcCCeeEEeCCCHHHHHHHHHHHHhc-CC------EEEeCCccHHHHHHHHHHHHHHHHHH
Confidence 35699999999999999999999 999999999999999999999 75 89999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHhccchhhhhHHHHHHHHhcccCCCCCchhhHHHHHhhcccCchHHHHHHHHHcC
Q 041006 82 LISEAYYLLKHVGGVSNAELAEIFDEWNKGELESFMVQITADIFKVKDEYGEGELVDKILDKTGMKGTGKWTIQQAAELL 161 (333)
Q Consensus 82 a~AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~i~S~L~~i~~~il~~~d~~~~~~lvd~~~d~~~~k~~~~~~v~~A~~~G 161 (333)
+++|++.++++ .|+|++++.++ ++.+...|++.+...+.+..+++ .+.+-++...+ |.+++++.|.+.|
T Consensus 212 ~~~Ea~~l~~~-~G~d~~~~~~~---~~~~~~~s~~~~~~~~~~l~~~~-~~gf~~~~~~K------Dl~~~~~~a~~~g 280 (320)
T 4dll_A 212 AVAEALLFATK-GGADMAKVKEA---ITGGFADSRVLQLHGQRMVERDF-APRARLSIQLK------DMRNALATAQEIG 280 (320)
T ss_dssp HHHHHHHHHHH-TSCCHHHHHHH---HTTSTTCBHHHHTHHHHHHTTCC-CCSSBHHHHHH------HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHH-cCCCHHHHHHH---HHcccccCHHHHHhhhhhccCCC-CCcccHHHHHH------HHHHHHHHHHHcC
Confidence 99999999995 99999999999 88887778888766555555553 45555555443 5889999999999
Q ss_pred CChhHHHHHHH
Q 041006 162 IAALTIAGSLD 172 (333)
Q Consensus 162 vplP~~~aAl~ 172 (333)
+|+|++..+..
T Consensus 281 ~~~p~~~~~~~ 291 (320)
T 4dll_A 281 FDAPITGLFEQ 291 (320)
T ss_dssp CCCHHHHHHHH
T ss_pred CCChHHHHHHH
Confidence 99998877654
No 17
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.84 E-value=3.3e-20 Score=173.21 Aligned_cols=153 Identities=13% Similarity=0.195 Sum_probs=133.0
Q ss_pred ccCCccEEecccCCCHHHHhcCC-eecccCCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHHHHHH
Q 041006 3 PVRRVCLISAWGSPGARKARHGP-SLMPGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYGDMQ 81 (333)
Q Consensus 3 ~~~G~~~ldapVSGg~~gA~~G~-sim~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a~m~ 81 (333)
+++|++|+|+||+|++..|+.|+ .+|+||+++++++++|+|+.++.+ ++++|+.|+++.+|+++|.+.++.+.
T Consensus 110 ~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~------~~~~g~~g~~~~~Kl~~N~~~~~~~~ 183 (287)
T 3pef_A 110 VAKGGRFLEAPVSGSKKPAEDGTLIILAAGDRNLYDEAMPGFEKMGKK------IIHLGDVGKGAEMKLVVNMVMGGMMA 183 (287)
T ss_dssp HHTTCEEEECCEECCHHHHHHTCEEEEEEECHHHHHHHHHHHHHHEEE------EEECSSTTHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCEEEECCCcCCHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCC------eEEeCCCCHHHHHHHHHHHHHHHHHH
Confidence 35699999999999999999999 999999999999999999999987 89999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHhccchhhhhHHHHHHHHhcccCCCCCchhhHHHHHhhcccCchHHHHHHHHHcC
Q 041006 82 LISEAYYLLKHVGGVSNAELAEIFDEWNKGELESFMVQITADIFKVKDEYGEGELVDKILDKTGMKGTGKWTIQQAAELL 161 (333)
Q Consensus 82 a~AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~i~S~L~~i~~~il~~~d~~~~~~lvd~~~d~~~~k~~~~~~v~~A~~~G 161 (333)
+++|++.|+++ .|+|++++.++ ++.|...|++.+...+.+..+++ .+.+.++...+ |.+++++.|.++|
T Consensus 184 ~~~E~~~l~~~-~G~d~~~~~~~---~~~~~~~s~~~~~~~~~~~~~~~-~~~~~~~~~~k------d~~~~~~~a~~~g 252 (287)
T 3pef_A 184 CFCEGLALGEK-AGLATDAILDV---IGAGAMANPMFALKGGLIRDRNF-APAFPLKHMQK------DLRLAVALGDRVG 252 (287)
T ss_dssp HHHHHHHHHHH-TTCCHHHHHHH---HHHSTTCCHHHHHHHHHHHTTCC-CCSSBHHHHHH------HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHH-cCCCHHHHHHH---HHhcccccHHHHHHhhhhhcCCC-CCCCchHHHHH------HHHHHHHHHHHcC
Confidence 99999999995 99999999999 77777678877766555555553 45555655543 5889999999999
Q ss_pred CChhHHHHHHH
Q 041006 162 IAALTIAGSLD 172 (333)
Q Consensus 162 vplP~~~aAl~ 172 (333)
+|+|++..+..
T Consensus 253 ~~~p~~~~~~~ 263 (287)
T 3pef_A 253 QPLVASAAANE 263 (287)
T ss_dssp CCCHHHHHHHH
T ss_pred CCChHHHHHHH
Confidence 99998877544
No 18
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.83 E-value=5.3e-20 Score=174.14 Aligned_cols=153 Identities=14% Similarity=0.157 Sum_probs=131.7
Q ss_pred ccCCccEEecccCCCHHHHhcCC-eecccCCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHHHHHH
Q 041006 3 PVRRVCLISAWGSPGARKARHGP-SLMPGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYGDMQ 81 (333)
Q Consensus 3 ~~~G~~~ldapVSGg~~gA~~G~-sim~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a~m~ 81 (333)
+++|++|+|+||+|++..|+.|+ ++|+||+++++++++|+|+.++.+ ++++|+.|+|+.+|+++|.+.++.+.
T Consensus 130 ~~~g~~~v~~pv~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~g~~------~~~~g~~g~a~~~Kl~~N~~~~~~~~ 203 (310)
T 3doj_A 130 TGKGGRFVEGPVSGSKKPAEDGQLIILAAGDKALFEESIPAFDVLGKR------SFYLGQVGNGAKMKLIVNMIMGSMMN 203 (310)
T ss_dssp HHTTCEEEECCEECCHHHHHHTCEEEEEEECHHHHHHHHHHHHHHEEE------EEECSSTTHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCEEEeCCCCCChhHHhcCCeEEEEcCCHHHHHHHHHHHHHhCCC------EEEeCCcCHHHHHHHHHHHHHHHHHH
Confidence 35699999999999999999999 899999999999999999999986 89999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHhccchhhhhHHHHHHHHhcccCCCCCchhhHHHHHhhcccCchHHHHHHHHHcC
Q 041006 82 LISEAYYLLKHVGGVSNAELAEIFDEWNKGELESFMVQITADIFKVKDEYGEGELVDKILDKTGMKGTGKWTIQQAAELL 161 (333)
Q Consensus 82 a~AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~i~S~L~~i~~~il~~~d~~~~~~lvd~~~d~~~~k~~~~~~v~~A~~~G 161 (333)
+++|++.|+++ .|+|++++.++ ++.+...|++.+...+.+...++ .+.+.++...+ |.+.+++.|.+.|
T Consensus 204 ~~~Ea~~l~~~-~G~d~~~~~~~---~~~~~~~s~~~~~~~~~~~~~~~-~~~f~~~~~~K------Dl~~~~~~a~~~g 272 (310)
T 3doj_A 204 AFSEGLVLADK-SGLSSDTLLDI---LDLGAMTNPMFKGKGPSMNKSSY-PPAFPLKHQQK------DMRLALALGDENA 272 (310)
T ss_dssp HHHHHHHHHHH-TTSCHHHHHHH---HHHSTTCCHHHHHHHHHHHTTCC-CCSSBHHHHHH------HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHH-cCCCHHHHHHH---HHhcccccHHHHHHhhhhhcCCC-CCCccHHHHHH------HHHHHHHHHHHcC
Confidence 99999999995 99999999999 66677677776665555555553 45565555543 5788999999999
Q ss_pred CChhHHHHHHH
Q 041006 162 IAALTIAGSLD 172 (333)
Q Consensus 162 vplP~~~aAl~ 172 (333)
+|+|++..+..
T Consensus 273 ~~~p~~~~~~~ 283 (310)
T 3doj_A 273 VSMPVAAAANE 283 (310)
T ss_dssp CCCHHHHHHHH
T ss_pred CCChHHHHHHH
Confidence 99998876544
No 19
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.83 E-value=5.2e-20 Score=171.91 Aligned_cols=152 Identities=15% Similarity=0.160 Sum_probs=131.9
Q ss_pred cCCccEEecccCCCHHHHhcCC-eecccCCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHHHHHHH
Q 041006 4 VRRVCLISAWGSPGARKARHGP-SLMPGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYGDMQL 82 (333)
Q Consensus 4 ~~G~~~ldapVSGg~~gA~~G~-sim~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a~m~a 82 (333)
++|++|+|+||+|++.+++.|+ ++|+||+++++++++|+|+.++.+ ++++|+.|+|+.+|+++|.+.+..+.+
T Consensus 111 ~~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~------~~~~g~~g~~~~~Kl~~N~~~~~~~~~ 184 (287)
T 3pdu_A 111 ARGGRFLEAPVSGTKKPAEDGTLIILAAGDQSLFTDAGPAFAALGKK------CLHLGEVGQGARMKLVVNMIMGQMMTA 184 (287)
T ss_dssp HTTCEEEECCEECCHHHHHHTCEEEEEEECHHHHHHTHHHHHHHEEE------EEECSSTTHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCEEEECCccCCHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCC------EEEcCCCChHHHHHHHHHHHHHHHHHH
Confidence 5699999999999999999999 999999999999999999999986 899999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHhccchhhhhHHHHHHHHhcccCCCCCchhhHHHHHhhcccCchHHHHHHHHHcCC
Q 041006 83 ISEAYYLLKHVGGVSNAELAEIFDEWNKGELESFMVQITADIFKVKDEYGEGELVDKILDKTGMKGTGKWTIQQAAELLI 162 (333)
Q Consensus 83 ~AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~i~S~L~~i~~~il~~~d~~~~~~lvd~~~d~~~~k~~~~~~v~~A~~~Gv 162 (333)
++|++.++++ .|+|++++.++ ++.+...|++.+...+.+.+.++ .+.+.++...+ |.+++++.|.+.|+
T Consensus 185 ~~Ea~~l~~~-~G~~~~~~~~~---~~~~~~~s~~~~~~~~~~~~~~~-~~~~~~~~~~k------d~~~~~~~a~~~g~ 253 (287)
T 3pdu_A 185 LGEGMALGRN-CGLDGGQLLEV---LDAGAMANPMFKGKGQMLLSGEF-PTSFPLKHMQK------DLRLAVELGDRLGQ 253 (287)
T ss_dssp HHHHHHHHHH-TTCCHHHHHHH---HHHSTTCCHHHHHHHHHHHHTCC-CCSSBHHHHHH------HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHH-cCCCHHHHHHH---HHhccccChHHHhhccccccCCC-CCCCcHHHHHH------HHHHHHHHHHHcCC
Confidence 9999999995 99999999999 66676678777766555555553 44555555443 58899999999999
Q ss_pred ChhHHHHHHH
Q 041006 163 AALTIAGSLD 172 (333)
Q Consensus 163 plP~~~aAl~ 172 (333)
|+|++..+..
T Consensus 254 ~~p~~~~~~~ 263 (287)
T 3pdu_A 254 PLHGAATANE 263 (287)
T ss_dssp CCHHHHHHHH
T ss_pred CChHHHHHHH
Confidence 9998877544
No 20
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.82 E-value=1.9e-19 Score=169.61 Aligned_cols=153 Identities=21% Similarity=0.231 Sum_probs=131.1
Q ss_pred ccCCccEEecccCCCHHHHhcCC-eecccCCHHHHHHHHHHHHHHhccCCCCCceEEeCC-CChhhHHHHHHHHHHHHHH
Q 041006 3 PVRRVCLISAWGSPGARKARHGP-SLMPGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGE-GGSSNFVKMVHNGIEYGDM 80 (333)
Q Consensus 3 ~~~G~~~ldapVSGg~~gA~~G~-sim~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~-~GaG~~vKlv~N~l~~a~m 80 (333)
+++|+.|+|+||+|++..|+.|+ ++|+||+++++++++|+|+.++.+ ++++|+ .|+|+.+|+++|.+.+..+
T Consensus 117 ~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~------~~~~~~~~g~a~~~Kl~~N~~~~~~~ 190 (303)
T 3g0o_A 117 TALNLNMLDAPVSGGAVKAAQGEMTVMASGSEAAFTRLKPVLDAVASN------VYRISDTPGAGSTVKIIHQLLAGVHI 190 (303)
T ss_dssp HTTTCEEEECCEESCHHHHHTTCEEEEEECCHHHHHHHHHHHHHHEEE------EEEEESSTTHHHHHHHHHHHHHHHHH
T ss_pred HHcCCeEEeCCCCCChhhhhcCCeEEEeCCCHHHHHHHHHHHHHHCCC------EEECCCCCcHHHHHHHHHHHHHHHHH
Confidence 35699999999999999999999 999999999999999999999987 899998 8999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHhccchhhhhHHHHHHHHhcccCCCCCchhhHHHHHhhcccCchHHHHHHHHHc
Q 041006 81 QLISEAYYLLKHVGGVSNAELAEIFDEWNKGELESFMVQITADIFKVKDEYGEGELVDKILDKTGMKGTGKWTIQQAAEL 160 (333)
Q Consensus 81 ~a~AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~i~S~L~~i~~~il~~~d~~~~~~lvd~~~d~~~~k~~~~~~v~~A~~~ 160 (333)
.+++|++.++++ .|+|++++.++ ++.+...|++.+...+.+..+++ .+.+.++...+ |.+++++.|.++
T Consensus 191 ~~~~Ea~~l~~~-~G~d~~~~~~~---~~~~~~~s~~~~~~~~~~~~~~~-~~~~~~~~~~k------D~~~~~~~a~~~ 259 (303)
T 3g0o_A 191 AAAAEAMALAAR-AGIPLDVMYDV---VTHAAGNSWMFENRMQHVVDGDY-TPRSAVDIFVK------DLGLVADTAKAL 259 (303)
T ss_dssp HHHHHHHHHHHH-TTCCHHHHHHH---HTTSTTCCHHHHHHHHHHHTTCC-CCSSBHHHHHH------HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH-cCCCHHHHHHH---HHhcccCCHHHHhhhHHHhcCCC-CCCCchHHHHH------HHHHHHHHHHHc
Confidence 999999999995 99999999999 87777778777655444444442 34455555443 578899999999
Q ss_pred CCChhHHHHHHH
Q 041006 161 LIAALTIAGSLD 172 (333)
Q Consensus 161 GvplP~~~aAl~ 172 (333)
|+|+|++..+..
T Consensus 260 g~~~p~~~~~~~ 271 (303)
T 3g0o_A 260 RFPLPLASTALN 271 (303)
T ss_dssp TCCCHHHHHHHH
T ss_pred CCCChHHHHHHH
Confidence 999998877544
No 21
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.82 E-value=9.2e-20 Score=171.43 Aligned_cols=158 Identities=18% Similarity=0.163 Sum_probs=127.6
Q ss_pred ccCCccEEecccCCCHHHHhcCC-eecccCCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHHHHHH
Q 041006 3 PVRRVCLISAWGSPGARKARHGP-SLMPGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYGDMQ 81 (333)
Q Consensus 3 ~~~G~~~ldapVSGg~~gA~~G~-sim~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a~m~ 81 (333)
+++|++|+|+||+|++.+++.|+ ++|+||+++++++++|+|+.++.+ ++|+|+.|+|+.+|+++|.+.+..++
T Consensus 120 ~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~------~~~~g~~g~a~~~Kl~~N~~~~~~~~ 193 (296)
T 3qha_A 120 KARDIHIVDAPVSGGAAAAARGELATMVGADREVYERIKPAFKHWAAV------VIHAGEPGAGTRMKLARNMLTFTSYA 193 (296)
T ss_dssp GGGTCEEEECCEESCHHHHHHTCEEEEEECCHHHHHHHHHHHHHHEEE------EEEEESTTHHHHHHHHHHHHHHHHHH
T ss_pred HHcCCEEEeCCCcCCHHHHhcCCccEEecCCHHHHHHHHHHHHHHcCC------eEEcCChhHHHHHHHHHHHHHHHHHH
Confidence 45699999999999999999999 999999999999999999999987 89999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHH---hccchhhhhHHHHHHHHhcccCCCCCchhh-----HHHHHhhcccCchHHH
Q 041006 82 LISEAYYLLKHVGGVSNAELAEIFDE---WNKGELESFMVQITADIFKVKDEYGEGELV-----DKILDKTGMKGTGKWT 153 (333)
Q Consensus 82 a~AEg~~Ll~~~~Gld~~~ia~I~~~---w~~G~i~S~L~~i~~~il~~~d~~~~~~lv-----d~~~d~~~~k~~~~~~ 153 (333)
+++|++.|+++ .|+|++++.++|.. .+.|...|++.+ ...++.. . .+.+.+ +... ||.+++
T Consensus 194 ~~~E~~~l~~~-~G~d~~~~~~~~~~~~~i~~~~~~s~~~~-~~~~~~~-~--~~~f~~~~~~~~~~~------KD~~~~ 262 (296)
T 3qha_A 194 AACEAMKLAEA-AGLDLQALGRVVRHTDALTGGPGAIMVRD-NMKDLEP-D--NFLYQPFLHTRGLGE------KDLSLA 262 (296)
T ss_dssp HHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHCCGGGGCCCS-SCSCCCT-T--STTHHHHHHHHHHHH------HHHHHH
T ss_pred HHHHHHHHHHH-cCCCHHHHhhhcchHHHHhcCcccCHHhh-chhhhhc-C--CCCCchhhhhhHHHH------HHHHHH
Confidence 99999999995 99999999555322 455555566555 3233332 1 334444 3332 468899
Q ss_pred HHHHHHcCCChhHHHHHHHHHHHhh
Q 041006 154 IQQAAELLIAALTIAGSLDCRYLSG 178 (333)
Q Consensus 154 v~~A~~~GvplP~~~aAl~~r~~s~ 178 (333)
++.|.++|+|+|++..+.. .|..+
T Consensus 263 ~~~a~~~g~~~p~~~~~~~-~~~~~ 286 (296)
T 3qha_A 263 LALGEAVSVDLPLARLAYE-GLAAG 286 (296)
T ss_dssp HHHHHHTTCCCHHHHHHHH-HHHHH
T ss_pred HHHHHHcCCCChHHHHHHH-HHHHH
Confidence 9999999999998877654 44433
No 22
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.77 E-value=9.8e-19 Score=165.23 Aligned_cols=150 Identities=12% Similarity=0.071 Sum_probs=122.7
Q ss_pred ccCCccEEecccCCCHHHHhcCC-eecccCCHHHHHHHHHHHHHHhccCCCCCceEEe--CC-CChhhHHHHHHHHHHHH
Q 041006 3 PVRRVCLISAWGSPGARKARHGP-SLMPGGSFEAYNNIQGILQKVAAQVDDGPCVTYI--GE-GGSSNFVKMVHNGIEYG 78 (333)
Q Consensus 3 ~~~G~~~ldapVSGg~~gA~~G~-sim~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~--G~-~GaG~~vKlv~N~l~~a 78 (333)
+++|++|+|+||||+++.+..+. ++|+||+++++++++|+|+.++.+ ++|+ |+ .|+|+.+| .+.++
T Consensus 116 ~~~g~~~vdapv~g~~~~~~~~~~~i~~gg~~~~~~~~~~ll~~lg~~------~~~~~~g~~~g~g~~~k----~~~~~ 185 (306)
T 3l6d_A 116 NQAGGHYVKGMIVAYPRNVGHRESHSIHTGDREAFEQHRALLEGLAGH------TVFLPWDEALAFATVLH----AHAFA 185 (306)
T ss_dssp HHTTCEEEEEEEESCGGGTTCTTCEEEEEECHHHHHHHHHHHHTTCSE------EEECCHHHHHHHHHHHH----HHHHH
T ss_pred HHcCCeEEecccccCcccccCCceEEEEcCCHHHHHHHHHHHHHhcCC------EEEecCCCCccHHHHHH----HHHHH
Confidence 35799999999999998888877 899999999999999999999776 8999 97 79999999 67788
Q ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHHhccch--hhhhHHHHHHHHhcccCCCCCchhhHHHHHhhcccCchHHHHHH
Q 041006 79 DMQLISEAYYLLKHVGGVSNAELAEIFDEWNKGE--LESFMVQITADIFKVKDEYGEGELVDKILDKTGMKGTGKWTIQQ 156 (333)
Q Consensus 79 ~m~a~AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~--i~S~L~~i~~~il~~~d~~~~~~lvd~~~d~~~~k~~~~~~v~~ 156 (333)
.+++++|++.|+++ .|+|++++.++ ++.+. ..|++.+...+.+.++++..+.+-++...+ |.+++++.
T Consensus 186 ~~~~~~Ea~~la~~-~Gld~~~~~~~---~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~K------Dl~~~~~~ 255 (306)
T 3l6d_A 186 AMVTFFEAVGAGDR-FGLPVSKTARL---LLETSRFFVADALEEAVRRLETQDFKGDQARLDVHAD------AFAHIAQS 255 (306)
T ss_dssp HHHHHHHHHHHHHH-TTCCHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHTCCCTTSSBHHHHHH------HHHHHHHH
T ss_pred HHHHHHHHHHHHHH-cCCCHHHHHHH---HHHhhhhcccHHHHHHHHHHhcCCCCCCcccHHHHHH------HHHHHHHH
Confidence 99999999999995 99999999999 65554 457766655555555553222344555443 58899999
Q ss_pred HHHcCCChhHHHHHHH
Q 041006 157 AAELLIAALTIAGSLD 172 (333)
Q Consensus 157 A~~~GvplP~~~aAl~ 172 (333)
|.+.|+|+|++..+..
T Consensus 256 a~~~g~~~p~~~~~~~ 271 (306)
T 3l6d_A 256 LHAQGVWTPVFDAVCQ 271 (306)
T ss_dssp HHHTTCCCHHHHHHHH
T ss_pred HHHcCCCchHHHHHHH
Confidence 9999999998876544
No 23
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.76 E-value=5.1e-18 Score=159.22 Aligned_cols=152 Identities=18% Similarity=0.177 Sum_probs=128.5
Q ss_pred cCCccEEecccCCCHHHHhcCC-eecccCCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHHHHHHH
Q 041006 4 VRRVCLISAWGSPGARKARHGP-SLMPGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYGDMQL 82 (333)
Q Consensus 4 ~~G~~~ldapVSGg~~gA~~G~-sim~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a~m~a 82 (333)
++|++|+|+||+|++.+++.|+ ++|+||+++++++++|+|+.++.+ ++++|+.|+++.+|+++|.+.++.+.+
T Consensus 113 ~~g~~~~~~pv~~~~~~~~~g~l~~~~~g~~~~~~~~~~ll~~~g~~------~~~~~~~~~~~~~Kl~~n~~~~~~~~~ 186 (302)
T 2h78_A 113 ERGLAMLDAPVSGGTAGAAAGTLTFMVGGDAEALEKARPLFEAMGRN------IFHAGPDGAGQVAKVCNNQLLAVLMIG 186 (302)
T ss_dssp HTTCCEEECCEESCHHHHHHTCEEEEEESCHHHHHHHHHHHHHHEEE------EEEEESTTHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCEEEEEEccCChhhHhcCCceEEeCCCHHHHHHHHHHHHHhCCC------eEEcCCccHHHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999 999999999999999999999987 899999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHhccchhhhhHHHHHHH-------HhcccCCCCCchhhHHHHHhhcccCchHHHHH
Q 041006 83 ISEAYYLLKHVGGVSNAELAEIFDEWNKGELESFMVQITAD-------IFKVKDEYGEGELVDKILDKTGMKGTGKWTIQ 155 (333)
Q Consensus 83 ~AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~i~S~L~~i~~~-------il~~~d~~~~~~lvd~~~d~~~~k~~~~~~v~ 155 (333)
++|++.++++ .|+|++++.++ ++.+...|++.+...+ .+..+++ .+.+.++...+ |.+.+++
T Consensus 187 ~~Ea~~l~~~-~G~~~~~~~~~---~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~-~~g~~~~~~~k------D~~~~~~ 255 (302)
T 2h78_A 187 TAEAMALGVA-NGLEAKVLAEI---MRRSSGGNWALEVYNPWPGVMENAPASRDY-SGGFMAQLMAK------DLGLAQE 255 (302)
T ss_dssp HHHHHHHHHH-TTCCHHHHHHH---HHTSTTCCHHHHHCCCSTTTSTTSGGGGTT-CSSSBHHHHHH------HHHHHHH
T ss_pred HHHHHHHHHH-cCCCHHHHHHH---HHcCCCCCHHHHHhCCCcccccccccCCCC-CCCCcHHHHHH------HHHHHHH
Confidence 9999999995 99999999999 7777766776665433 3334442 34455554433 5778999
Q ss_pred HHHHcCCChhHHHHHHH
Q 041006 156 QAAELLIAALTIAGSLD 172 (333)
Q Consensus 156 ~A~~~GvplP~~~aAl~ 172 (333)
.|.+.|+|+|++..+..
T Consensus 256 ~a~~~g~~~p~~~~~~~ 272 (302)
T 2h78_A 256 AAQASASSTPMGSLALS 272 (302)
T ss_dssp HHHHHTCCCHHHHHHHH
T ss_pred HHHHcCCCChHHHHHHH
Confidence 99999999998876544
No 24
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.65 E-value=2e-15 Score=140.93 Aligned_cols=152 Identities=20% Similarity=0.210 Sum_probs=124.4
Q ss_pred cCCccEEecccCCCHHHHhcCC-eecccCCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHHHHHHH
Q 041006 4 VRRVCLISAWGSPGARKARHGP-SLMPGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYGDMQL 82 (333)
Q Consensus 4 ~~G~~~ldapVSGg~~gA~~G~-sim~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a~m~a 82 (333)
++|+.|+++||+|++.++..|. .+|+||+++.+++++++|+.++.+ ++++|+.|+|..+|+++|.+.+..+.+
T Consensus 115 ~~g~~~~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g~~------~~~~~~~~~~~~~Kl~~n~~~~~~~~~ 188 (299)
T 1vpd_A 115 AKGVEMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGS------VVHTGDIGAGNVTKLANQVIVALNIAA 188 (299)
T ss_dssp TTTCEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHHHHHHTTEEE------EEEEESTTHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCeEEEecCCCCHhHHhcCCEEEEeCCCHHHHHHHHHHHHHHcCC------eEEeCCcCHHHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999998 899999999999999999999986 899999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHhccchhhhhHHHHHHHHhcccCCCCCchhhHHHHHhhcccCchHHHHHHHHHcCC
Q 041006 83 ISEAYYLLKHVGGVSNAELAEIFDEWNKGELESFMVQITADIFKVKDEYGEGELVDKILDKTGMKGTGKWTIQQAAELLI 162 (333)
Q Consensus 83 ~AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~i~S~L~~i~~~il~~~d~~~~~~lvd~~~d~~~~k~~~~~~v~~A~~~Gv 162 (333)
++|++.++++ .|++++++.++ +..+...++........+..++. .+.+-++... +|..++++.|.+.|+
T Consensus 189 ~~Ea~~l~~~-~G~~~~~~~~~---~~~~~~~s~~~~~~~~~~l~~~~-~~g~~~~~~~------kd~~~~~~~a~~~gv 257 (299)
T 1vpd_A 189 MSEALTLATK-AGVNPDLVYQA---IRGGLAGSTVLDAKAPMVMDRNF-KPGFRIDLHI------KDLANALDTSHGVGA 257 (299)
T ss_dssp HHHHHHHHHH-TTCCHHHHHHH---HTTSTTCCHHHHHHHHHHHTTCC-CCSSBHHHHH------HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHH-cCCCHHHHHHH---HHccCCCCHHHHHhhhHhhcCCC-CCCCChHHHH------HHHHHHHHHHHHcCC
Confidence 9999999995 99999998888 77766556554433333333332 3334444443 257789999999999
Q ss_pred ChhHHHHHHH
Q 041006 163 AALTIAGSLD 172 (333)
Q Consensus 163 plP~~~aAl~ 172 (333)
|+|+...+..
T Consensus 258 ~~p~~~~~~~ 267 (299)
T 1vpd_A 258 QLPLTAAVME 267 (299)
T ss_dssp CCHHHHHHHH
T ss_pred CChHHHHHHH
Confidence 9998876544
No 25
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.65 E-value=3.2e-16 Score=148.41 Aligned_cols=142 Identities=9% Similarity=0.040 Sum_probs=110.3
Q ss_pred CccEEecccCCCHHHHhcCC-eecccCCHHHHHHHHHHHHHHhccCCCCCceEEeCC-CChhhHHHHHHHHHHHHHHHHH
Q 041006 6 RVCLISAWGSPGARKARHGP-SLMPGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGE-GGSSNFVKMVHNGIEYGDMQLI 83 (333)
Q Consensus 6 G~~~ldapVSGg~~gA~~G~-sim~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~-~GaG~~vKlv~N~l~~a~m~a~ 83 (333)
|++|+|+||+|++..+ .|+ ++|+||+++ ++++|+|+.++.+ ++++|+ .|+|+.+|+++|++.++.+.++
T Consensus 137 g~~~vd~pv~g~~~~~-~g~l~i~vgg~~~--~~~~~ll~~~g~~------~~~~g~~~g~a~~~Kl~~n~~~~~~~~~~ 207 (312)
T 3qsg_A 137 SAQYAAVAVMSAVKPH-GHRVPLVVDGDGA--RRFQAAFTLYGCR------IEVLDGEVGGAALLKMCRSAVLKGLEALF 207 (312)
T ss_dssp TCEEEEEEECSCSTTT-GGGSEEEEESTTH--HHHHHHHHTTTCE------EEECCSSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEeccccCCchhh-cCCEEEEecCChH--HHHHHHHHHhCCC------eEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999987655 677 999999998 9999999999986 899998 8999999999999999999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHhccchhhhhHHHHHHHHhcccCCCCCchhhHHHHHhhcccCchHHHHHHHHHcCCC
Q 041006 84 SEAYYLLKHVGGVSNAELAEIFDEWNKGELESFMVQITADIFKVKDEYGEGELVDKILDKTGMKGTGKWTIQQAAELLIA 163 (333)
Q Consensus 84 AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~i~S~L~~i~~~il~~~d~~~~~~lvd~~~d~~~~k~~~~~~v~~A~~~Gvp 163 (333)
+|++.++++ .|+|+ ++.++ ++.+. .++..+...+.+..+++ .+.+-+ .+|.+.+++.|.+.|+|
T Consensus 208 ~Ea~~la~~-~Gld~-~~~~~---l~~~~-~~~~~~~~~~~~~~~~~-~~g~~~---------~KDl~~~~~~a~~~g~~ 271 (312)
T 3qsg_A 208 LEALAAAEK-MGLAD-RVLAS---LDASF-PEHHLRDLALYLVERNL-EHADRR---------AHELGEVAATLCSVGVE 271 (312)
T ss_dssp HHHHHHHHT-TTCHH-HHHHH---HHHHS-GGGTHHHHHHHHHHHHH-HHHHHH---------HHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHH-cCCCH-HHHHH---HHhcC-CchhHHHhhhHhhcCCC-Ccccch---------HHHHHHHHHHHHHcCCC
Confidence 999999995 99998 56667 44433 22222222232222221 222222 14688899999999999
Q ss_pred hhHHHHHHH
Q 041006 164 ALTIAGSLD 172 (333)
Q Consensus 164 lP~~~aAl~ 172 (333)
+|++..+..
T Consensus 272 ~pl~~~~~~ 280 (312)
T 3qsg_A 272 PLVAEAGYR 280 (312)
T ss_dssp CHHHHHHHH
T ss_pred cHHHHHHHH
Confidence 998877654
No 26
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.63 E-value=5.3e-16 Score=147.38 Aligned_cols=151 Identities=10% Similarity=0.073 Sum_probs=113.3
Q ss_pred ccCCccEEecccCCCHHHHhcCC-eecccCCHHHHHHHHHHHHHHhccCCCCCceEEeCC-CChhhHHHHHHHHHHHHHH
Q 041006 3 PVRRVCLISAWGSPGARKARHGP-SLMPGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGE-GGSSNFVKMVHNGIEYGDM 80 (333)
Q Consensus 3 ~~~G~~~ldapVSGg~~gA~~G~-sim~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~-~GaG~~vKlv~N~l~~a~m 80 (333)
+++|+.|+|+||||+ ..++.|+ ++|+||+.+ ++++|+|+.++.+ ++++|+ .|+|+.+|+++|.+.++.+
T Consensus 136 ~~~g~~~~d~pv~g~-~~a~~g~l~i~vgg~~~--~~~~~ll~~~g~~------v~~~g~~~g~a~~~Kl~~N~~~~~~~ 206 (317)
T 4ezb_A 136 ATGKGSFVEGAVMAR-VPPYAEKVPILVAGRRA--VEVAERLNALGMN------LEAVGETPGQASSLKMIRSVMIKGVE 206 (317)
T ss_dssp HTSSCEEEEEEECSC-STTTGGGSEEEEESTTH--HHHHHHHHTTTCE------EEEEESSTTHHHHHHHHHHHHHHHHH
T ss_pred HHcCCeEEeccCCCC-chhhcCCEEEEEeCChH--HHHHHHHHHhCCC------eEEeCCCcCHHHHHHHHHHHHHHHHH
Confidence 357899999999996 5677887 999999998 9999999999986 999998 8999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHhccch-hhhhHHHHHHHHhcccCCCCCchhhHHHHHhhcccCchHHHHHHHHH
Q 041006 81 QLISEAYYLLKHVGGVSNAELAEIFDEWNKGE-LESFMVQITADIFKVKDEYGEGELVDKILDKTGMKGTGKWTIQQAAE 159 (333)
Q Consensus 81 ~a~AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~-i~S~L~~i~~~il~~~d~~~~~~lvd~~~d~~~~k~~~~~~v~~A~~ 159 (333)
++++|++.|+++ .|+|++ +.+. +..+. ..++ ......++. +++ .+.+-+ -+|.+.+++.|.+
T Consensus 207 ~~~~E~~~la~~-~Gid~~-~~~~---l~~~~~~~~~-~~~~~~~~~-~~~-~~g~~~---------~KDl~~~~~~a~~ 269 (317)
T 4ezb_A 207 ALLIEALSSAER-AGVTER-ILDS---VQETFPGLDW-RDVADYYLS-RTF-EHGARR---------VTEMTEAAETIES 269 (317)
T ss_dssp HHHHHHHHHHHH-TTCHHH-HHHH---HHHHSTTSCH-HHHHHHHHH-HHH-HHHHHH---------HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH-cCCCHH-HHHH---HHhcCccccH-HHhhhhhhc-CCC-CCCcch---------HHHHHHHHHHHHH
Confidence 999999999995 999994 5444 44432 2233 122222222 221 122221 2368899999999
Q ss_pred cCCChhHHHHHHHHHHHhhhh
Q 041006 160 LLIAALTIAGSLDCRYLSGLK 180 (333)
Q Consensus 160 ~GvplP~~~aAl~~r~~s~~~ 180 (333)
.|+|+|++.++.. .|..+++
T Consensus 270 ~g~~~pl~~~~~~-~~~~a~~ 289 (317)
T 4ezb_A 270 FGLNAPMSRAACE-TIAAAHA 289 (317)
T ss_dssp TTCCCHHHHHHHH-HHHHHHH
T ss_pred cCCCChHHHHHHH-HHHHHHH
Confidence 9999998766544 4444433
No 27
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.61 E-value=1.2e-14 Score=135.06 Aligned_cols=152 Identities=17% Similarity=0.213 Sum_probs=123.3
Q ss_pred cCCccEEecccCCCHHHHhcCC-eecccCCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHHHHHHH
Q 041006 4 VRRVCLISAWGSPGARKARHGP-SLMPGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYGDMQL 82 (333)
Q Consensus 4 ~~G~~~ldapVSGg~~gA~~G~-sim~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a~m~a 82 (333)
++|++|+++|++||+..+..|+ .+++||+++.+++++++|+.++.+ ++++|+.|++..+|+++|.+.+..+.+
T Consensus 112 ~~g~~~~~~p~~~~~~~a~~g~~~~~~~~~~~~~~~~~~ll~~~g~~------~~~~~~~~~~~~~Kl~~n~~~~~~~~~ 185 (295)
T 1yb4_A 112 EMGADYLDAPVSGGEIGAREGTLSIMVGGEQKVFDRVKPLFDILGKN------ITLVGGNGDGQTCKVANQIIVALNIEA 185 (295)
T ss_dssp TTTEEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHEEE------EEEEESTTHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCeEEEccCCCCHHHHHcCCeEEEECCCHHHHHHHHHHHHHhcCC------EEEeCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999 899999999999999999999986 889999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHhccchhhhhHHHHHHHHhcccCCCCCchhhHHHHHhhcccCchHHHHHHHHHcCC
Q 041006 83 ISEAYYLLKHVGGVSNAELAEIFDEWNKGELESFMVQITADIFKVKDEYGEGELVDKILDKTGMKGTGKWTIQQAAELLI 162 (333)
Q Consensus 83 ~AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~i~S~L~~i~~~il~~~d~~~~~~lvd~~~d~~~~k~~~~~~v~~A~~~Gv 162 (333)
++|++.++++ .|++++++.++ +..+...++........+..+++ .+.+......+ |..+++..+.+.|+
T Consensus 186 ~~E~~~l~~~-~G~~~~~~~~~---~~~~~~~s~~~~~~~~~~~~~~~-~~g~~~~~~~k------d~~~~~~~a~~~g~ 254 (295)
T 1yb4_A 186 VSEALVFASK-AGADPVRVRQA---LMGGFASSRILEVHGERMINRTF-EPGFKIALHQK------DLNLALQSAKALAL 254 (295)
T ss_dssp HHHHHHHHHH-TTCCHHHHHHH---HTSSSSCBHHHHHHHHHHHTTCC-CCSSBHHHHHH------HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHH-cCCCHHHHHHH---HHcCCCCCHHHHHhhHHHhcCCC-CCCCchHHHHH------HHHHHHHHHHHcCC
Confidence 9999999995 99999998888 77666555544433233333332 33344443332 46789999999999
Q ss_pred ChhHHHHHHH
Q 041006 163 AALTIAGSLD 172 (333)
Q Consensus 163 plP~~~aAl~ 172 (333)
|+|++.+...
T Consensus 255 ~~p~~~~~~~ 264 (295)
T 1yb4_A 255 NLPNTATCQE 264 (295)
T ss_dssp CCHHHHHHHH
T ss_pred CChHHHHHHH
Confidence 9998766544
No 28
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.60 E-value=7.8e-15 Score=136.99 Aligned_cols=152 Identities=20% Similarity=0.235 Sum_probs=122.7
Q ss_pred cCCccEEecccCCCHHHHhcCC-eecccCCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHHHHHHH
Q 041006 4 VRRVCLISAWGSPGARKARHGP-SLMPGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYGDMQL 82 (333)
Q Consensus 4 ~~G~~~ldapVSGg~~gA~~G~-sim~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a~m~a 82 (333)
++|++|+++|++||+.+++.|+ ++++||+++.++.++++|+.++.+ ++++|+.|+|..+|+++|.+.+..+.+
T Consensus 114 ~~g~~~~~~p~~~~~~~a~~g~~~~~~~g~~~~~~~v~~ll~~~g~~------~~~~~~~g~~~~~Kl~~N~~~~~~~~~ 187 (301)
T 3cky_A 114 EKGIDYVDAPVSGGTKGAEAGTLTIMVGASEAVFEKIQPVLSVIGKD------IYHVGDTGAGDAVKIVNNLLLGCNMAS 187 (301)
T ss_dssp HTTCEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHEEE------EEEEESTTHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCeEEEccCCCCHHHHHcCCeEEEECCCHHHHHHHHHHHHHhcCC------EEEeCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3589999999999999999998 899999999999999999999986 889999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHhccchhhhhHHHHHHH-HhcccCCCCCchhhHHHHHhhcccCchHHHHHHHHHcC
Q 041006 83 ISEAYYLLKHVGGVSNAELAEIFDEWNKGELESFMVQITAD-IFKVKDEYGEGELVDKILDKTGMKGTGKWTIQQAAELL 161 (333)
Q Consensus 83 ~AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~i~S~L~~i~~~-il~~~d~~~~~~lvd~~~d~~~~k~~~~~~v~~A~~~G 161 (333)
++|++.++++ .|++++++.++ ...+...++....... .+..++. .+.+-++.+.+ |..++++.+.+.|
T Consensus 188 ~~Ea~~l~~~-~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~-~~g~~~~~~~k------d~~~~~~~a~~~g 256 (301)
T 3cky_A 188 LAEALVLGVK-CGLKPETMQEI---IGKSSGRSYAMEAKMEKFIMSGDF-AGGFAMDLQHK------DLGLALEAGKEGN 256 (301)
T ss_dssp HHHHHHHHHH-TTCCHHHHHHH---HHTSTTCBHHHHHHCCCCCCTCCC-SSSSBHHHHHH------HHHHHHHHHHHHT
T ss_pred HHHHHHHHHH-cCCCHHHHHHH---HHcCCCCCHHHHHhhhhhhhcCCC-CCCccHHHHHH------HHHHHHHHHHHhC
Confidence 9999999995 99999998888 5555545554443323 2223332 33444554443 4678999999999
Q ss_pred CChhHHHHHHH
Q 041006 162 IAALTIAGSLD 172 (333)
Q Consensus 162 vplP~~~aAl~ 172 (333)
+|+|+..+...
T Consensus 257 v~~p~~~~~~~ 267 (301)
T 3cky_A 257 VPLPMTAMATQ 267 (301)
T ss_dssp CCCHHHHHHHH
T ss_pred CCChHHHHHHH
Confidence 99998766443
No 29
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.56 E-value=2.1e-15 Score=145.78 Aligned_cols=100 Identities=20% Similarity=0.420 Sum_probs=72.2
Q ss_pred chhhHHHHHHHHHHHHHHHhHHHHHHHHHhc------------------cCCCCCCCChHHHHHHhhhc----------c
Q 041006 207 DKKRLIDDVRQALYASKICSYAQGMNLLRSK------------------SNEKGWNLNFGELARIWKDG----------I 258 (333)
Q Consensus 207 ~~~~~~~~lrda~~~~~i~syaQG~~ll~~a------------------s~~~~w~~~~~~ia~iWr~G----------i 258 (333)
..+++++.+++++++++|++|+||+.+.+++ +++|+|.+|+.+|+++||+| +
T Consensus 204 G~g~~~Kl~~n~l~~~~i~~~aE~~~la~~a~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~~~~~~g~~~~s~~l~~~ 283 (358)
T 4e21_A 204 GAGHFVKMVHNGIEYGLMAAYAEGLNILHHANAGKEGQGADAETAPLRNPDFYRYDLDLADITEVWRRGSVISSWLLDLS 283 (358)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCC--------------CGGGCCCCCCHHHHHHHHTTTSTTCBHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccchhcccCCCHHHHHHHHhCccHHHHHHHHHH
Confidence 4578999999999999999999999999998 89999999999999999998 6
Q ss_pred hhhhccCCCCCCCc---CcH------------------HHHHHHHHh----ccCcch-hHHHHHhhhhcCcccc
Q 041006 259 NKAYQRNPNLASLV---MDP------------------EFAREMVQR----RARLPG-NLVQAQRDLFGAHTYE 306 (333)
Q Consensus 259 ~~a~~~~~~l~~ll---~~~------------------~~~~~~~~~----~~~lp~-~liqaqRd~FGaH~~~ 306 (333)
.++|.++|.+.++. .+. -+...+..+ ..++|+ |++||||||||+|+++
T Consensus 284 ~~~~~~~p~~~~~~~~~~d~g~~r~~~~~A~~~gvp~p~~~~al~~~~~s~~~~~~~~~l~~a~r~~fG~h~~~ 357 (358)
T 4e21_A 284 ATALLDSPDLQEFQGRVSDSGEGRWTVAAAIDEGVPAHVLSSALYERFSSRGEDDFANRLLSAMRYEFGGHREK 357 (358)
T ss_dssp HHHHHHCTTCTTC--CCCCCSHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTTTTHHHHHHHHHHC---------
T ss_pred HHHHhhCCChHHHHHHHHhcCcHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCcccHHHHHHHHHHhcCCCCCC
Confidence 77888898875432 121 111111111 678885 7999999999999985
No 30
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.56 E-value=2.1e-14 Score=133.67 Aligned_cols=152 Identities=19% Similarity=0.137 Sum_probs=120.4
Q ss_pred cCCccEEecccCCCHHHHhcCC-eecccCCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHHHHHHH
Q 041006 4 VRRVCLISAWGSPGARKARHGP-SLMPGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYGDMQL 82 (333)
Q Consensus 4 ~~G~~~ldapVSGg~~gA~~G~-sim~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a~m~a 82 (333)
++|+.|+++|++||+.+++.|. .+++||+++.+++++++|+.++.+ ++++|+.|+|..+|+++|.+.+..+..
T Consensus 110 ~~g~~~~~~p~~~g~~~a~~~~~~~~~~~~~~~~~~v~~l~~~~g~~------~~~~~~~g~~~~~kl~~n~~~~~~~~~ 183 (296)
T 2gf2_A 110 KMGAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSN------VVYCGAVGTGQAAKICNNMLLAISMIG 183 (296)
T ss_dssp HTTCEEEECCEESHHHHHHHTCEEEEEESCGGGHHHHHHHHTTTEEE------EEEEESTTHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCEEEEcCCCCChhHHhcCcEEEEeCCCHHHHHHHHHHHHHHcCC------eEEeCCccHHHHHHHHHHHHHHHHHHH
Confidence 3588999999999999999999 899999999999999999999986 889999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHhccchhhhhHHHHHH---HHhc----ccCCCCCchhhHHHHHhhcccCchHHHHH
Q 041006 83 ISEAYYLLKHVGGVSNAELAEIFDEWNKGELESFMVQITA---DIFK----VKDEYGEGELVDKILDKTGMKGTGKWTIQ 155 (333)
Q Consensus 83 ~AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~i~S~L~~i~~---~il~----~~d~~~~~~lvd~~~d~~~~k~~~~~~v~ 155 (333)
++|++.++++ .|++++++.++ +..+...+++.+... ..++ .+++ .+.+-++.+. +|.+++++
T Consensus 184 ~~Ea~~~~~~-~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~-~~g~~~~~~~------kd~~~~~~ 252 (296)
T 2gf2_A 184 TAEAMNLGIR-LGLDPKLLAKI---LNMSSGRCWSSDTYNPVPGVMDGVPSANNY-QGGFGTTLMA------KDLGLAQD 252 (296)
T ss_dssp HHHHHHHHHH-TTCCHHHHHHH---HHTSTTCBHHHHHSCSSTTTCSSSGGGGTT-CSSSBHHHHH------HHHHHHHH
T ss_pred HHHHHHHHHH-cCCCHHHHHHH---HHhCcccCHHHHhcCCcccccccchhccCC-CCCCchHHHH------HHHHHHHH
Confidence 9999999995 99999999888 555554455544310 1111 1121 2223333322 35788999
Q ss_pred HHHHcCCChhHHHHHHH
Q 041006 156 QAAELLIAALTIAGSLD 172 (333)
Q Consensus 156 ~A~~~GvplP~~~aAl~ 172 (333)
.|.++|+|+|+...+..
T Consensus 253 ~a~~~gv~~p~~~~~~~ 269 (296)
T 2gf2_A 253 SATSTKSPILLGSLAHQ 269 (296)
T ss_dssp HHHHTTCCCHHHHHHHH
T ss_pred HHHHcCCCChHHHHHHH
Confidence 99999999998876544
No 31
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.55 E-value=2.6e-14 Score=132.38 Aligned_cols=150 Identities=18% Similarity=0.146 Sum_probs=122.8
Q ss_pred cCCccEEecccCCCHHHHhcCC-eecccCCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHHHHHHH
Q 041006 4 VRRVCLISAWGSPGARKARHGP-SLMPGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYGDMQL 82 (333)
Q Consensus 4 ~~G~~~ldapVSGg~~gA~~G~-sim~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a~m~a 82 (333)
++|+.|+++|++||+..+..|+ ++++||+++.+++++++| .++.+ ++++++.+.++.+|+++|++.+..+.+
T Consensus 106 ~~g~~~~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll-~~g~~------~~~~~~~~~~~~~k~~~n~~~~~~~~~ 178 (289)
T 2cvz_A 106 EKGVTYLDAPVSGGTSGAEAGTLTVMLGGPEEAVERVRPFL-AYAKK------VVHVGPVGAGHAVKAINNALLAVNLWA 178 (289)
T ss_dssp TTTEEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHGGGC-TTEEE------EEEEESTTHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCEEEEecCCCChhHHhhCCeEEEECCCHHHHHHHHHHH-hhcCC------eEEcCCCcHHHHHHHHHHHHHHHHHHH
Confidence 4588999999999999999999 899999999999999999 99976 889999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHhccchhhhhHHHHHHH--HhcccCCCCCchhhHHHHHhhcccCchHHHHHHHHHc
Q 041006 83 ISEAYYLLKHVGGVSNAELAEIFDEWNKGELESFMVQITAD--IFKVKDEYGEGELVDKILDKTGMKGTGKWTIQQAAEL 160 (333)
Q Consensus 83 ~AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~i~S~L~~i~~~--il~~~d~~~~~~lvd~~~d~~~~k~~~~~~v~~A~~~ 160 (333)
++|++.++++ .|++++++.++ +..+...+++.+...+ ++.. +. .+.+-++.+.+ |..++++.+.+.
T Consensus 179 ~~Ea~~l~~~-~G~~~~~~~~~---~~~~~~~s~~~~~~~~~~~l~~-~~-~~g~~~~~~~k------d~~~~~~~a~~~ 246 (289)
T 2cvz_A 179 AGEGLLALVK-QGVSAEKALEV---INASSGRSNATENLIPQRVLTR-AF-PKTFALGLLVK------DLGIAMGVLDGE 246 (289)
T ss_dssp HHHHHHHHHH-TTCCHHHHHHH---HTTSTTCBHHHHHTHHHHTTTS-CC-CCSSBHHHHHH------HHHHHHHHHTTT
T ss_pred HHHHHHHHHH-cCcCHHHHHHH---HHccCCCCHHHHHhccchhhcC-CC-CCCcChHHHHH------HHHHHHHHHHHc
Confidence 9999999995 99999998888 6666655665554333 4443 32 33444454443 467899999999
Q ss_pred CCChhHHHHHHH
Q 041006 161 LIAALTIAGSLD 172 (333)
Q Consensus 161 GvplP~~~aAl~ 172 (333)
|+|+|+..+...
T Consensus 247 gv~~p~~~~v~~ 258 (289)
T 2cvz_A 247 KAPSPLLRLARE 258 (289)
T ss_dssp CCCCHHHHHHHH
T ss_pred CCCChHHHHHHH
Confidence 999998766443
No 32
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.54 E-value=1.2e-13 Score=130.19 Aligned_cols=151 Identities=18% Similarity=0.208 Sum_probs=121.6
Q ss_pred cCCccEEecccCCCHHHHhcCC-eecccCCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHHHHHHH
Q 041006 4 VRRVCLISAWGSPGARKARHGP-SLMPGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYGDMQL 82 (333)
Q Consensus 4 ~~G~~~ldapVSGg~~gA~~G~-sim~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a~m~a 82 (333)
++|+.|+++|++|++..+..|+ .+++||+++.+++++++|+.++.+ +.++|+.|.+...|++.|++....+..
T Consensus 140 ~~~~~~v~~p~~g~~~~~~~g~~~~~~~g~~~~~~~v~~ll~~~g~~------~~~~~~~~~~~~~K~~~n~~~~~~~~~ 213 (316)
T 2uyy_A 140 SRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKT------SFFLGEVGNAAKMMLIVNMVQGSFMAT 213 (316)
T ss_dssp HTTCEEEECCEESCHHHHHHTCEEEEEEECHHHHHHTHHHHHHHEEE------EEECSSTTHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCEEEEcCccCChhHHhhCCEEEEeCCCHHHHHHHHHHHHHhcCC------EEEeCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3588999999999999999999 889999999999999999999986 889999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHhccchhhhhHHH-HHHHHhcccCCCCCchhhHHHHHhhcccCchHHHHHHHHHcC
Q 041006 83 ISEAYYLLKHVGGVSNAELAEIFDEWNKGELESFMVQ-ITADIFKVKDEYGEGELVDKILDKTGMKGTGKWTIQQAAELL 161 (333)
Q Consensus 83 ~AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~i~S~L~~-i~~~il~~~d~~~~~~lvd~~~d~~~~k~~~~~~v~~A~~~G 161 (333)
+.|++.++++ .|++++++.++ +..+...++... ....++.. +. .+.+-++.+.+ +..++++.+.+.|
T Consensus 214 ~~Ea~~la~~-~G~~~~~~~~~---~~~~~~~s~~~~~~~~~~l~~-~~-~~g~~~~~~~k------d~~~~~~~a~~~g 281 (316)
T 2uyy_A 214 IAEGLTLAQV-TGQSQQTLLDI---LNQGQLASIFLDQKCQNILQG-NF-KPDFYLKYIQK------DLRLAIALGDAVN 281 (316)
T ss_dssp HHHHHHHHHH-TTCCHHHHHHH---HHHSTTCCHHHHHHHHHHHHT-CC-CCSSBHHHHHH------HHHHHHHHHHHTT
T ss_pred HHHHHHHHHH-cCCCHHHHHHH---HHcCCCCCHHHHHhhHHhhcC-CC-CCCCcHHHHHH------HHHHHHHHHHHhC
Confidence 9999999995 99999998888 555555544433 33334443 32 33344444332 4678999999999
Q ss_pred CChhHHHHHHH
Q 041006 162 IAALTIAGSLD 172 (333)
Q Consensus 162 vplP~~~aAl~ 172 (333)
+|+|+..+...
T Consensus 282 v~~p~~~~v~~ 292 (316)
T 2uyy_A 282 HPTPMAAAANE 292 (316)
T ss_dssp CCCHHHHHHHH
T ss_pred CCChHHHHHHH
Confidence 99998766544
No 33
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.23 E-value=4.3e-11 Score=109.50 Aligned_cols=137 Identities=15% Similarity=0.117 Sum_probs=104.3
Q ss_pred EEecccCCCHHHHhcCCeecccCCHHHHHHHHHHHHHHhccCCCCCceEEeCC-CChhhHHHHHHHHHHHHHHHHHHHHH
Q 041006 9 LISAWGSPGARKARHGPSLMPGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGE-GGSSNFVKMVHNGIEYGDMQLISEAY 87 (333)
Q Consensus 9 ~ldapVSGg~~gA~~G~sim~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~-~GaG~~vKlv~N~l~~a~m~a~AEg~ 87 (333)
|+++||+|++..+..|..+|+||+.+ +++++ |+.++.+ ++++|+ .|++..+|+++|++.+..+.+++|++
T Consensus 107 ~~~~~v~~~~~~~~~g~~~~~~g~~~--~~~~~-l~~~g~~------~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~ 177 (264)
T 1i36_A 107 FVDAAIMGSVRRKGADIRIIASGRDA--EEFMK-LNRYGLN------IEVRGREPGDASAIKMLRSSYTKGVSALLWETL 177 (264)
T ss_dssp EEEEEECSCHHHHGGGCEEEEESTTH--HHHHG-GGGGTCE------EEECSSSTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeeeeCCccccccCCeEEecCCcH--HHhhh-HHHcCCe------eEECCCCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998889999887 89999 9999975 889998 79999999999999999999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHhccchhhhhHHHHHHHHhcccCCCCCchhhHHHHHhhcccCchHHHHHHHHHcCCChhHH
Q 041006 88 YLLKHVGGVSNAELAEIFDEWNKGELESFMVQITADIFKVKDEYGEGELVDKILDKTGMKGTGKWTIQQAAELLIAALTI 167 (333)
Q Consensus 88 ~Ll~~~~Gld~~~ia~I~~~w~~G~i~S~L~~i~~~il~~~d~~~~~~lvd~~~d~~~~k~~~~~~v~~A~~~GvplP~~ 167 (333)
.++++ .|+|.+ ..++ +..+...+++. .....+. .+. .+.+- . .++...+++.+.+. +|+|++
T Consensus 178 ~la~~-~G~~~~-~~~~---~~~~~g~~~~~-~~~~~~~-~~~-~~g~~---~------~~~~~~~~~~a~~~-v~~p~~ 239 (264)
T 1i36_A 178 TAAHR-LGLEED-VLEM---LEYTEGNDFRE-SAISRLK-SSC-IHARR---R------YEEMKEVQDMLAEV-IDPVMP 239 (264)
T ss_dssp HHHHH-TTCHHH-HHHH---HHTTSCSSTHH-HHHHHHH-HHH-HTHHH---H------HHHHHHHHHHHHTT-SCCSHH
T ss_pred HHHHH-cCCcHH-HHHH---HHHhcCccHHH-HHHHHhc-CCC-Ccchh---h------HHHHHHHHHHHHHh-cCchHH
Confidence 99995 999986 6566 54433223332 2222222 221 11111 1 12577888999999 999988
Q ss_pred HHHHH
Q 041006 168 AGSLD 172 (333)
Q Consensus 168 ~aAl~ 172 (333)
.+...
T Consensus 240 ~~v~~ 244 (264)
T 1i36_A 240 TCIIR 244 (264)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76544
No 34
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=98.97 E-value=5.9e-10 Score=111.44 Aligned_cols=140 Identities=8% Similarity=-0.118 Sum_probs=107.0
Q ss_pred ccEEecccCCCHHHHhcC---C-eecccCCHHHHHHHHHHHHHH-hccCCCCCceEEeCCCChhhHHHHHHHHHHHHHHH
Q 041006 7 VCLISAWGSPGARKARHG---P-SLMPGGSFEAYNNIQGILQKV-AAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYGDMQ 81 (333)
Q Consensus 7 ~~~ldapVSGg~~gA~~G---~-sim~GG~~~a~~~v~pvL~~i-~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a~m~ 81 (333)
+.++++|+++.+..|.++ + .||+||+++++++++|+|+.+ +.+ ++++|+.++|+.+|+++|.+.+..++
T Consensus 174 ~~v~~~Pe~~~~G~a~~~~~~~~~Iv~G~~~~~~~~~~~ly~~~~~~~------~~~~~~~~~aE~~Kl~~N~~~a~~Ia 247 (478)
T 3g79_A 174 FALAHAPERVMVGRLLKNIREHDRIVGGIDEASTKRAVELYSPVLTVG------QVIPMSATAAEVTKTAENTFRDLQIA 247 (478)
T ss_dssp BEEEECCCCCCTTSHHHHHHHSCEEEEESSHHHHHHHHHHHGGGCSSC------CEEEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred eeEEeCCccCCccchhhhhcCCcEEEEeCCHHHHHHHHHHHhhhccCC------eEEeCCHHHHHHHHHHHHHHHHHHHH
Confidence 579999999888777554 3 799999999999999999999 664 88999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHhccchhhhhHHHHHHHHhcccCCCCCch--hhHHHHHhhcccCchHHHHHHHHH
Q 041006 82 LISEAYYLLKHVGGVSNAELAEIFDEWNKGELESFMVQITADIFKVKDEYGEGE--LVDKILDKTGMKGTGKWTIQQAAE 159 (333)
Q Consensus 82 a~AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~i~S~L~~i~~~il~~~d~~~~~~--lvd~~~d~~~~k~~~~~~v~~A~~ 159 (333)
.+.|...++++ .|+|..++.++ .+... ++ +|. ..+ +.+.+ -.+-+- +|....+..|.+
T Consensus 248 ~~nE~~~l~e~-~GiD~~~v~~~---~~~~~---~~-ri~-----~~~-~~PG~G~GG~c~~------KD~~~l~~~a~~ 307 (478)
T 3g79_A 248 AINQLALYCEA-MGINVYDVRTG---VDSLK---GE-GIT-----RAV-LWPGAGVGGHCLT------KDTYHLERGVKI 307 (478)
T ss_dssp HHHHHHHHHHH-TTCCHHHHHHH---HHTSC---CS-SSC-----CCC-CCCCSCCCSSHHH------HHHHHHHHHHTT
T ss_pred HHHHHHHHHHH-cCCCHHHHHHH---HCCCc---hh-hhc-----ccc-CCCCCCcchhhHH------HHHHHHHHHHHH
Confidence 99999999996 99999999888 33221 11 111 111 11111 111121 247778889999
Q ss_pred cCCC-------hhHHHHHHH
Q 041006 160 LLIA-------ALTIAGSLD 172 (333)
Q Consensus 160 ~Gvp-------lP~~~aAl~ 172 (333)
+|+| +|++.++..
T Consensus 308 ~g~~~~~~~~~~~li~~~~~ 327 (478)
T 3g79_A 308 GRGELDYPEGADSIYVLARK 327 (478)
T ss_dssp SSCCCCCCSSCCCHHHHHHH
T ss_pred cCCCcccccchhHHHHHHHH
Confidence 9987 788877654
No 35
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=98.96 E-value=7.2e-10 Score=109.94 Aligned_cols=140 Identities=12% Similarity=0.048 Sum_probs=105.3
Q ss_pred EecccCCCHHHHhcCC---------eecccCC-HHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHHHH
Q 041006 10 ISAWGSPGARKARHGP---------SLMPGGS-FEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYGD 79 (333)
Q Consensus 10 ldapVSGg~~gA~~G~---------sim~GG~-~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a~ 79 (333)
+|.+|++||+.|+.|. .||+||+ ++++++++|+|+.+..+. ..++++|+.+++..+|+++|++.+..
T Consensus 150 ~d~~v~~~Pe~a~eG~a~~d~~~p~~ivvG~~~~~~~~~~~~ly~~~~~~~---~~~~~~~d~~~aE~~Kl~~N~~~a~~ 226 (446)
T 4a7p_A 150 SGAKVVSNPEFLREGAAIEDFKRPDRVVVGTEDEFARQVMREIYRPLSLNQ---SAPVLFTGRRTSELIKYAANAFLAVK 226 (446)
T ss_dssp SCCEEEECCCCCCTTSHHHHHHSCSCEEEECSCHHHHHHHHHHHCSCC--------CEEEECHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEeCcccccccchhhhccCCCEEEEeCCcHHHHHHHHHHHHHHhcCC---CeEEEeCCHHHHHHHHHHHHHHHHHH
Confidence 6889999999999885 6899996 899999999999887630 01588999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHhccchhhhhHHHHHHHHhcccCCCCCchhhHHHHHhhcccCchHHHHHHHHH
Q 041006 80 MQLISEAYYLLKHVGGVSNAELAEIFDEWNKGELESFMVQITADIFKVKDEYGEGELVDKILDKTGMKGTGKWTIQQAAE 159 (333)
Q Consensus 80 m~a~AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~i~S~L~~i~~~il~~~d~~~~~~lvd~~~d~~~~k~~~~~~v~~A~~ 159 (333)
++.++|...|+++ .|+|..++.++ .+.+.-+ ....+... +.+-.+-+- +|....+..|.+
T Consensus 227 ia~~nE~~~l~~~-~GiD~~~v~~~---~~~~~ri------g~~~l~pg----~G~gg~c~~------KD~~~l~~~A~~ 286 (446)
T 4a7p_A 227 ITFINEIADLCEQ-VGADVQEVSRG---IGMDNRI------GGKFLHAG----PGYGGSCFP------KDTLALMKTAAD 286 (446)
T ss_dssp HHHHHHHHHHHHH-TTCCHHHHHHH---HHTSTTC---------CCCCC----SCCCTTTHH------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-cCCCHHHHHHH---HhcCCCC------CCccCCCC----CCcchhhHH------HHHHHHHHHHHh
Confidence 9999999999996 99999999888 4444311 11122211 112222222 247778899999
Q ss_pred cCCChhHHHHHHH
Q 041006 160 LLIAALTIAGSLD 172 (333)
Q Consensus 160 ~GvplP~~~aAl~ 172 (333)
+|+|+|++.++..
T Consensus 287 ~g~~~~l~~~~~~ 299 (446)
T 4a7p_A 287 NETPLRIVEATVQ 299 (446)
T ss_dssp TTCCCHHHHHHHH
T ss_pred cCCCCHHHHHHHH
Confidence 9999999887755
No 36
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=98.83 E-value=2.6e-09 Score=106.08 Aligned_cols=139 Identities=10% Similarity=-0.029 Sum_probs=105.3
Q ss_pred EecccCCCHHHHhcCCe---------ecccCC-HHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHHHH
Q 041006 10 ISAWGSPGARKARHGPS---------LMPGGS-FEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYGD 79 (333)
Q Consensus 10 ldapVSGg~~gA~~G~s---------im~GG~-~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a~ 79 (333)
+|.+|++||+.++.|.. +|+||+ ++++++++|+++.+..+ ..++++++.+.+..+|+++|++.+..
T Consensus 147 ~d~~v~~~Pe~a~eG~~~~~~~~p~~ivvG~~~~~~~~~~~~l~~~~~~~----~~~~~~~d~~~aE~~Kl~~N~~~a~~ 222 (450)
T 3gg2_A 147 IDFDIASNPEFLKEGNAIDDFMKPDRVVVGVDSDRARELITSLYKPMLLN----NFRVLFMDIASAEMTKYAANAMLATR 222 (450)
T ss_dssp CCEEEEECCCCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTTTCCS----CCCEEEECHHHHHHHHHHHHHHHHHH
T ss_pred cceeEEechhhhcccchhhhccCCCEEEEEcCCHHHHHHHHHHHHHHhcC----CCeEEecCHHHHHHHHHHHHHHHHHH
Confidence 67889999998888863 888984 89999999999988762 02568899899999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHhccchhhhhHHHHHHHHhcccCCCCCchhhHHHHHhhcccCchHHHHHHHHH
Q 041006 80 MQLISEAYYLLKHVGGVSNAELAEIFDEWNKGELESFMVQITADIFKVKDEYGEGELVDKILDKTGMKGTGKWTIQQAAE 159 (333)
Q Consensus 80 m~a~AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~i~S~L~~i~~~il~~~d~~~~~~lvd~~~d~~~~k~~~~~~v~~A~~ 159 (333)
+..++|...|+++ .|+|+.++.++ .+.+.-+.+ ..+... +.+-.+-+- +|....+..|.+
T Consensus 223 ia~~nE~~~l~~~-~Gid~~~v~~~---~~~~~rig~------~~~~pg----~G~gg~c~~------KD~~~l~~~a~~ 282 (450)
T 3gg2_A 223 ISFMNDVANLCER-VGADVSMVRLG---IGSDSRIGS------KFLYPG----CGYGGSCFP------KDVKALIRTAED 282 (450)
T ss_dssp HHHHHHHHHHHHH-HTCCHHHHHHH---HHTSTTTCS------SSCCCS----SCCCSSHHH------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-hCCCHHHHHHH---HcCCCCCCc------ccCCCC----CCCCcccHH------hhHHHHHHHHHH
Confidence 9999999999996 99999999888 443321100 111111 112222222 247778899999
Q ss_pred cCCChhHHHHHHH
Q 041006 160 LLIAALTIAGSLD 172 (333)
Q Consensus 160 ~GvplP~~~aAl~ 172 (333)
+|+|+|++.++..
T Consensus 283 ~g~~~~l~~~~~~ 295 (450)
T 3gg2_A 283 NGYRMEVLEAVER 295 (450)
T ss_dssp TTCCCHHHHHHHH
T ss_pred cCCCcHHHHHHHH
Confidence 9999999987765
No 37
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=98.81 E-value=4.6e-09 Score=103.72 Aligned_cols=92 Identities=9% Similarity=0.071 Sum_probs=83.3
Q ss_pred ccEEecccCCCHHHHhcC---C-eecccCCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHHHHHHH
Q 041006 7 VCLISAWGSPGARKARHG---P-SLMPGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYGDMQL 82 (333)
Q Consensus 7 ~~~ldapVSGg~~gA~~G---~-sim~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a~m~a 82 (333)
+.++++|+++.+..|.++ | .||+|++++++++++|+++.++.+ ++|+|+.++|+.+|+++|++.+..++.
T Consensus 155 ~~v~~~Pe~~~~G~A~~~~~~p~~Iv~G~~~~~~~~~~~ly~~~~~~------~~~~~~~~~AE~~Kl~~N~~~a~~Ia~ 228 (431)
T 3ojo_A 155 IYLVHCPERVLPGKILEELVHNNRIIGGVTKACIEAGKRVYRTFVQG------EMIETDARTAEMSKLMENTYRDVNIAL 228 (431)
T ss_dssp EEEEECCCCCCTTSHHHHHHHSCEEEEESSHHHHHHHHHHHTTTCCS------CEEEEEHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEECCCcCCCcchhhcccCCCEEEEeCCHHHHHHHHHHHHHHhCC------cEEeCCHHHHHHHHHHHHHHHHHHHHH
Confidence 589999988877766555 4 799999999999999999999875 788999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHH
Q 041006 83 ISEAYYLLKHVGGVSNAELAEIF 105 (333)
Q Consensus 83 ~AEg~~Ll~~~~Gld~~~ia~I~ 105 (333)
+.|...++++ .|+|..++.+++
T Consensus 229 ~nE~~~l~e~-~GiD~~~v~~~~ 250 (431)
T 3ojo_A 229 ANELTKICNN-LNINVLDVIEMA 250 (431)
T ss_dssp HHHHHHHHHH-TTCCHHHHHHHH
T ss_pred HHHHHHHHHH-cCCCHHHHHHHH
Confidence 9999999996 999999998883
No 38
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=98.71 E-value=3.6e-09 Score=96.27 Aligned_cols=70 Identities=16% Similarity=0.077 Sum_probs=62.9
Q ss_pred CCccEEecccCCCHHHHhcCC-eecccCC-HHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHHHH
Q 041006 5 RRVCLISAWGSPGARKARHGP-SLMPGGS-FEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYGD 79 (333)
Q Consensus 5 ~G~~~ldapVSGg~~gA~~G~-sim~GG~-~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a~ 79 (333)
+|+.|+++||+||+.+|+.|+ ++|++|+ ++++++++|+|+.++.+ .++|+|+.|+|+.+|+++|.+....
T Consensus 160 ~~~~~~~a~v~~~~~~a~~g~~~~~v~g~d~~~~~~v~~ll~~~g~~-----~~~~~G~~g~a~~~k~~~~~~~~l~ 231 (245)
T 3dtt_A 160 KTLNTMNASLMVDPGRAAGGDHSVFVSGNDAAAKAEVATLLKSLGHQ-----DVIDLGDITTARGAEMLLPVWIRLW 231 (245)
T ss_dssp ECSTTSCHHHHHCGGGTGGGCCCEEEECSCHHHHHHHHHHHHHTTCC-----CEEEEESGGGHHHHHTTHHHHHHHH
T ss_pred EeecccCHHHhcCccccCCCCeeEEEECCCHHHHHHHHHHHHHcCCC-----ceeccCcHHHHHHhhhhHHHHHHHH
Confidence 488999999999999999999 8888664 99999999999999964 2799999999999999999987655
No 39
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=98.69 E-value=3.3e-08 Score=97.56 Aligned_cols=91 Identities=12% Similarity=0.115 Sum_probs=79.6
Q ss_pred EEecccCCCHHHHhcC---C-eecccCCHHHHHHHHHHHHH--HhccCCCCCceEEeCCCChhhHHHHHHHHHHHHHHHH
Q 041006 9 LISAWGSPGARKARHG---P-SLMPGGSFEAYNNIQGILQK--VAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYGDMQL 82 (333)
Q Consensus 9 ~ldapVSGg~~gA~~G---~-sim~GG~~~a~~~v~pvL~~--i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a~m~a 82 (333)
++.+|+++++..|.+| | .||+||+.+.++++.|+|.. +... ..+++++.++|..+|+++|.+.+..++.
T Consensus 172 v~~sPe~~~~G~A~~~~l~p~rIvvG~~~~~~~~~~~ll~~~~~~~~-----~~v~~~~~~~AE~~Kl~~N~~~a~~Ia~ 246 (432)
T 3pid_A 172 VIFSPEFLREGRALYDNLHPSRIVIGERSARAERFADLLKEGAIKQD-----IPTLFTDSTEAEAIKLFANTYLALRVAY 246 (432)
T ss_dssp EEECCCCCCTTSHHHHHHSCSCEEESSCSHHHHHHHHHHHHHCSSSS-----CCEEECCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeecCccCCcchhhhcccCCceEEecCCHHHHHHHHHHHHhhhccCC-----CeEEecCccHHHHHHHHHHHHHHHHHHH
Confidence 4459999999999877 3 69999999999999999997 4432 1356788899999999999999999999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHH
Q 041006 83 ISEAYYLLKHVGGVSNAELAEIF 105 (333)
Q Consensus 83 ~AEg~~Ll~~~~Gld~~~ia~I~ 105 (333)
++|...|+++ .|+|..++.+++
T Consensus 247 ~nEl~~lae~-~GiD~~~v~~~~ 268 (432)
T 3pid_A 247 FNELDSYAES-QGLNSKQIIEGV 268 (432)
T ss_dssp HHHHHHHHHH-TTCCHHHHHHHH
T ss_pred HHHHHHHHHH-cCCCHHHHHHHH
Confidence 9999999995 999999998883
No 40
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=98.69 E-value=1.2e-08 Score=101.68 Aligned_cols=139 Identities=12% Similarity=0.049 Sum_probs=104.5
Q ss_pred CccEEecccCCCHHHHhcCC-e--------ecccC-----CHHHHHHHHHHHHHH-hccCCCCCceEEeCCCChhhHHHH
Q 041006 6 RVCLISAWGSPGARKARHGP-S--------LMPGG-----SFEAYNNIQGILQKV-AAQVDDGPCVTYIGEGGSSNFVKM 70 (333)
Q Consensus 6 G~~~ldapVSGg~~gA~~G~-s--------im~GG-----~~~a~~~v~pvL~~i-~~~~~~~p~v~~~G~~GaG~~vKl 70 (333)
+..++|+||+++++.++.|. . +|+|| +++++++++++++.+ +.+ ++++|+.+++..+|+
T Consensus 149 ~~~~~d~~V~~~Pe~~~~G~~~~d~~~~~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~------~~~~~~~~~ae~~Kl 222 (467)
T 2q3e_A 149 TKPNLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPRE------KILTTNTWSSELSKL 222 (467)
T ss_dssp CCTTCEEEEEECCCCCCTTSHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHHTTTSCGG------GEEEECHHHHHHHHH
T ss_pred CCCCCCeEEEeCHHHhhcccchhhccCCCEEEECCCCCCCCHHHHHHHHHHHHHhccCC------eEEecCHHHHHHHHH
Confidence 45578999999999999998 4 88999 889999999999999 544 789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHhccchhhhhHHHHHHHHhcccCCCCCchhhHHHHHhhcccCch
Q 041006 71 VHNGIEYGDMQLISEAYYLLKHVGGVSNAELAEIFDEWNKGELESFMVQITADIFKVKDEYGEGELVDKILDKTGMKGTG 150 (333)
Q Consensus 71 v~N~l~~a~m~a~AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~i~S~L~~i~~~il~~~d~~~~~~lvd~~~d~~~~k~~~ 150 (333)
++|.+....++.+.|+..++++ .|+|.+++.+++.. +.-+++ ..+.....+ +...+. +|.
T Consensus 223 ~~N~~~a~~ia~~nE~~~l~~~-~Gid~~~v~~~~~~---~~~~~~------~~~~pg~g~-gg~c~~---------kD~ 282 (467)
T 2q3e_A 223 AANAFLAQRISSINSISALCEA-TGADVEEVATAIGM---DQRIGN------KFLKASVGF-GGSCFQ---------KDV 282 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HTCCHHHHHHHHHT---STTTCS------SSCCCCSCC-CSSSHH---------HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hCcCHHHHHHHHcC---CCCCCc------cccCCCCCC-CCccHH---------HHH
Confidence 9999999999999999999996 99999999988433 221110 011111100 111111 257
Q ss_pred HHHHHHHHHcCCC--hhHHHHH
Q 041006 151 KWTIQQAAELLIA--ALTIAGS 170 (333)
Q Consensus 151 ~~~v~~A~~~Gvp--lP~~~aA 170 (333)
...+..|.+.|+| .+.+.++
T Consensus 283 ~~l~~~a~~~g~~~~~~~~~~~ 304 (467)
T 2q3e_A 283 LNLVYLCEALNLPEVARYWQQV 304 (467)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCchHHHHHHHH
Confidence 7788899999998 4544443
No 41
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=98.48 E-value=8.3e-08 Score=95.92 Aligned_cols=137 Identities=13% Similarity=0.042 Sum_probs=97.9
Q ss_pred EecccCCCHHHHhcCC---------eecccCCH-----HHHHHHHHHHHHHhc-cCCCCCceEEeCCCChhhHHHHHHHH
Q 041006 10 ISAWGSPGARKARHGP---------SLMPGGSF-----EAYNNIQGILQKVAA-QVDDGPCVTYIGEGGSSNFVKMVHNG 74 (333)
Q Consensus 10 ldapVSGg~~gA~~G~---------sim~GG~~-----~a~~~v~pvL~~i~~-~~~~~p~v~~~G~~GaG~~vKlv~N~ 74 (333)
+|.+|.++|+.++.|. .+|+||+. +++++++++++.++. + ++++++.+++..+|+++|+
T Consensus 159 ~d~~v~~~Pe~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~------~~~~~d~~~ae~~Kl~~N~ 232 (481)
T 2o3j_A 159 LKFQVLSNPEFLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRN------RIITTNTWSSELSKLVANA 232 (481)
T ss_dssp CCEEEEECCCCCCTTCHHHHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGG------GEEEEEHHHHHHHHHHHHH
T ss_pred CceEEEeCcccccccchhhcccCCCEEEEEecCchhhHHHHHHHHHHHHhhcCCC------eEEecCHHHHHHHHHHHHH
Confidence 4445555554444443 68899976 689999999999985 4 7889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHhccchhhhhHHHHHHHHhcccCCCCCchhhHHHHHhhcccCchHHHH
Q 041006 75 IEYGDMQLISEAYYLLKHVGGVSNAELAEIFDEWNKGELESFMVQITADIFKVKDEYGEGELVDKILDKTGMKGTGKWTI 154 (333)
Q Consensus 75 l~~a~m~a~AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~i~S~L~~i~~~il~~~d~~~~~~lvd~~~d~~~~k~~~~~~v 154 (333)
+....+..+.|...++++ .|+|..++.++ ++.+.-+.+ ..+.... .+-.+-+- +|....+
T Consensus 233 ~~a~~ia~~nE~~~la~~-~Gid~~~v~~~---~~~~~ri~~------~~~~pg~----g~gg~c~~------KD~~~l~ 292 (481)
T 2o3j_A 233 FLAQRISSINSISAVCEA-TGAEISEVAHA---VGYDTRIGS------KFLQASV----GFGGSCFQ------KDVLSLV 292 (481)
T ss_dssp HHHHHHHHHHHHHHHHHH-HSCCHHHHHHH---HHTSTTTCS------SSCCCCS----CCCSSSHH------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-hCcCHHHHHHH---HccCCCCCC------CCCCCCC----ccCCccHH------HHHHHHH
Confidence 999999999999999996 99999999888 544431110 1111111 01111111 2577788
Q ss_pred HHHHHcCCC--hhHHHHHHH
Q 041006 155 QQAAELLIA--ALTIAGSLD 172 (333)
Q Consensus 155 ~~A~~~Gvp--lP~~~aAl~ 172 (333)
..|.+.|+| +|++.++..
T Consensus 293 ~~A~~~g~~~~~~l~~~~~~ 312 (481)
T 2o3j_A 293 YLCESLNLPQVADYWQGVIN 312 (481)
T ss_dssp HHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHcCCCccchHHHHHHH
Confidence 899999999 898876543
No 42
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=98.37 E-value=4e-07 Score=90.92 Aligned_cols=137 Identities=12% Similarity=-0.025 Sum_probs=101.3
Q ss_pred EecccCCCHHHHhcCC---------eecccCC-H----HHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHH
Q 041006 10 ISAWGSPGARKARHGP---------SLMPGGS-F----EAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGI 75 (333)
Q Consensus 10 ldapVSGg~~gA~~G~---------sim~GG~-~----~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l 75 (333)
+|.+|+++|+.++.|. .+++|++ + ++.++++++|+.+..+ ..++++++.+.+..+|++.|++
T Consensus 153 ~~~~v~~~Pe~~~eG~~~~~~~~p~~iviG~~~~~~~~~~~~~~~~l~~~~~~~----~~~~~~~di~~ae~~Kl~~N~~ 228 (478)
T 2y0c_A 153 QMFSVVSNPEFLKEGAAVDDFTRPDRIVIGCDDDVPGERARELMKKLYAPFNRN----HERTLYMDVRSAEFTKYAANAM 228 (478)
T ss_dssp CCEEEEECCCCCCTTCHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHTGGGGSS----SCCEEEECHHHHHHHHHHHHHH
T ss_pred ccEEEEEChhhhcccceeeccCCCCEEEEEECCCcccHHHHHHHHHHHHHHhcc----CCeEEcCCHHHHHHHHHHHHHH
Confidence 7889999999998886 4888987 6 7999999999987741 0278889989999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHhccchhhhhHHHHHHHHhcccCCCCCchhhH--HHHHhhcccCchHHH
Q 041006 76 EYGDMQLISEAYYLLKHVGGVSNAELAEIFDEWNKGELESFMVQITADIFKVKDEYGEGELVD--KILDKTGMKGTGKWT 153 (333)
Q Consensus 76 ~~a~m~a~AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~i~S~L~~i~~~il~~~d~~~~~~lvd--~~~d~~~~k~~~~~~ 153 (333)
....+..+.|...++++ .|+|.+++.+.+. .. + .+.. .+ ..+.+.+. .+. +|....
T Consensus 229 ~a~~ia~~nE~~~la~~-~Gid~~~v~~~i~---~~---~-------rig~-~~-~~pG~g~gg~c~~------kD~~~l 286 (478)
T 2y0c_A 229 LATRISFMNELANLADR-FGADIEAVRRGIG---SD---P-------RIGY-HF-LYAGCGYGGSCFP------KDVEAL 286 (478)
T ss_dssp HHHHHHHHHHHHHHHHH-TTCCHHHHHHHHH---TS---T-------TTCS-TT-CCCSSCCCSSSHH------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-hCCCHHHHHHHHh---cC---C-------ccCc-cc-CCCCcccccCcCH------HHHHHH
Confidence 99999999999999996 9999988876632 11 0 0000 01 01111111 111 246678
Q ss_pred HHHHHHcCCChhHHHHHHH
Q 041006 154 IQQAAELLIAALTIAGSLD 172 (333)
Q Consensus 154 v~~A~~~GvplP~~~aAl~ 172 (333)
+..|.++|+|+|++.++..
T Consensus 287 ~~~A~~~gv~~pl~~~v~~ 305 (478)
T 2y0c_A 287 IRTADEHGQSLQILKAVSS 305 (478)
T ss_dssp HHHHHHTTCCCHHHHHHHH
T ss_pred HHHHHHcCCCcHHHHHHHH
Confidence 8899999999999887655
No 43
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=98.27 E-value=9.3e-07 Score=81.01 Aligned_cols=130 Identities=18% Similarity=0.189 Sum_probs=89.1
Q ss_pred HHHHhcCC-eecc-cCCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHH------------------H
Q 041006 18 ARKARHGP-SLMP-GGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIE------------------Y 77 (333)
Q Consensus 18 ~~gA~~G~-sim~-GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~------------------~ 77 (333)
+..+..|. .+++ +|+.+.+++++++|+.++.+ +.+.++.+.+...|++.|... .
T Consensus 129 ~~~~~~g~~~i~~~~~~~~~~~~~~~ll~~~g~~------~~~~~~~~~~~~~Kl~~n~~~n~~tal~~~~~g~~~~~~~ 202 (291)
T 1ks9_A 129 IIHVANGITHIGPARQQDGDYSYLADILQTVLPD------VAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQ 202 (291)
T ss_dssp EEEEECCCEEEEESSGGGTTCTHHHHHHHTTSSC------EEECTTHHHHHHHHHHHHHHHHHHHHHTTCCGGGGGGCHH
T ss_pred EEEecccceEEccCCCCcchHHHHHHHHHhcCCC------CeecHHHHHHHHHHHeeeeeecHHHHHHCCCchHHHhHHH
Confidence 44566777 6655 67788999999999998875 888998889999999999988 7
Q ss_pred HHHHHHHHHHHHHHHhCCCCH--HHHHHHHHH-hccc-hhh-hhHHHHHHHHhcccCCCCCchhhHHHHHhhcccCchHH
Q 041006 78 GDMQLISEAYYLLKHVGGVSN--AELAEIFDE-WNKG-ELE-SFMVQITADIFKVKDEYGEGELVDKILDKTGMKGTGKW 152 (333)
Q Consensus 78 a~m~a~AEg~~Ll~~~~Gld~--~~ia~I~~~-w~~G-~i~-S~L~~i~~~il~~~d~~~~~~lvd~~~d~~~~k~~~~~ 152 (333)
....++.|++.++++ .|+++ +.+.+.+.. .... ... |.+.+ +...+. .. ++ ....+
T Consensus 203 ~~~~~~~E~~~va~a-~G~~~~~~~~~~~~~~~~~~~~~~~ssm~~d----~~~g~~--~e---~~---------~~~g~ 263 (291)
T 1ks9_A 203 EIMQICEEVAAVIER-EGHHTSAEDLRDYVMQVIDATAENISSMLQD----IRALRH--TE---ID---------YINGF 263 (291)
T ss_dssp HHHHHHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHTTTCCCHHHHH----HHTTCC--CS---GG---------GTHHH
T ss_pred HHHHHHHHHHHHHHH-cCCCCCHHHHHHHHHHHHhcCCCCCChHHHH----HHcCCc--cH---HH---------HHHHH
Confidence 888999999999996 78876 454232211 2211 111 33322 222221 11 11 12457
Q ss_pred HHHHHHHcCCChhHHHHHHH
Q 041006 153 TIQQAAELLIAALTIAGSLD 172 (333)
Q Consensus 153 ~v~~A~~~GvplP~~~aAl~ 172 (333)
+++.|.++|+|+|+......
T Consensus 264 ~~~~a~~~gv~~P~~~~~~~ 283 (291)
T 1ks9_A 264 LLRRARAHGIAVPENTRLFE 283 (291)
T ss_dssp HHHHHHHHTCCCHHHHHHHH
T ss_pred HHHHHHHhCCCCCHHHHHHH
Confidence 88999999999998766443
No 44
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=98.25 E-value=1.7e-06 Score=80.00 Aligned_cols=94 Identities=10% Similarity=0.000 Sum_probs=81.9
Q ss_pred CCccEE-ecccCCCH------HHHhcCC--------e--ecccCCHHHHHHHHHHHHHHhc---cCCCCCceEEeCCCCh
Q 041006 5 RRVCLI-SAWGSPGA------RKARHGP--------S--LMPGGSFEAYNNIQGILQKVAA---QVDDGPCVTYIGEGGS 64 (333)
Q Consensus 5 ~G~~~l-dapVSGg~------~gA~~G~--------s--im~GG~~~a~~~v~pvL~~i~~---~~~~~p~v~~~G~~Ga 64 (333)
.|++|+ ++|++|++ .++..|. . ++.++++++++.++++|+.++. + ++++++.+.
T Consensus 114 ~~~~~v~~~P~~~~~~~~~~~~~~~~g~l~~~~~~~~i~~~~~~~~~~~~~v~~l~~~~G~~~~~------~~~v~~~~~ 187 (286)
T 3c24_A 114 ADITYFIGHPCHPPLFNDETDPAARTDYHGGIAKQAIVCALMQGPEEHYAIGADICETMWSPVTR------THRVTTEQL 187 (286)
T ss_dssp TTSEEEEEEECCSCSSCCCCSHHHHTCSSSSSSCEEEEEEEEESCTHHHHHHHHHHHHHTCSEEE------EEECCHHHH
T ss_pred CCCeEEecCCCCccccccccchhhccCcccccccceeeeeccCCCHHHHHHHHHHHHHhcCCcce------EEEeChhHh
Confidence 367899 99999998 7788882 2 4578999999999999999997 5 899998888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH
Q 041006 65 SNFVKMVHNGIEYGDMQLISEAYYLLKHVGGVSNAELAEI 104 (333)
Q Consensus 65 G~~vKlv~N~l~~a~m~a~AEg~~Ll~~~~Gld~~~ia~I 104 (333)
+.+.|.+.|+...+.+.+++|++..+.+..|+|.+++.++
T Consensus 188 ~~~~~a~~n~~~~~~~~~~~eal~~~~~~~Gl~~~~~~~~ 227 (286)
T 3c24_A 188 AILEPGLSEMVAMPFVETMVHAVDECADRYGIDRQAALDF 227 (286)
T ss_dssp HHHTTHHHHTTHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 8888999999999999999999988775469999998887
No 45
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=98.17 E-value=3.1e-06 Score=78.29 Aligned_cols=143 Identities=15% Similarity=0.010 Sum_probs=95.6
Q ss_pred CccEEecccCC-C-HHHHhcCC-eec--ccCCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHH----
Q 041006 6 RVCLISAWGSP-G-ARKARHGP-SLM--PGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIE---- 76 (333)
Q Consensus 6 G~~~ldapVSG-g-~~gA~~G~-sim--~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~---- 76 (333)
|..+++++++| + +..+..|. .++ .|++++.++.++++|+.++.+ +.+.++.+.+...|++.|.+.
T Consensus 129 g~~~~~~~~~~p~~~~~~~~g~~~i~~~~~~~~~~~~~~~~ll~~~g~~------~~~~~d~~~~~~~Kl~~N~~~~~~~ 202 (316)
T 2ew2_A 129 GITMWTAGLEGPGRVKLLGDGEIELENIDPSGKKFALEVVDVFQKAGLN------PSYSSNVRYSIWRKACVNGTLNGLC 202 (316)
T ss_dssp EEECCCCEEEETTEEEECSCCCEEEEESSGGGHHHHHHHHHHHHHTTCC------EEECTTHHHHHHHHHHHHTTHHHHH
T ss_pred EEeeeeeEEcCCCEEEEecCCcEEEeecCCCccHHHHHHHHHHHhCCCC------cEEchhHHHHHHHHHHHhhhHHHHH
Confidence 44566777776 2 33345666 554 478899999999999999875 778888889999999999753
Q ss_pred -----------------HHHHHHHHHHHHHHHHhCCCCH--HHHHHHHHHhccch--hh---hhHHHHHHHHhcccCCCC
Q 041006 77 -----------------YGDMQLISEAYYLLKHVGGVSN--AELAEIFDEWNKGE--LE---SFMVQITADIFKVKDEYG 132 (333)
Q Consensus 77 -----------------~a~m~a~AEg~~Ll~~~~Gld~--~~ia~I~~~w~~G~--i~---S~L~~i~~~il~~~d~~~ 132 (333)
.....++.|++.++++ .|+++ +.+.+.+..+.... .. |++.++. ...+. .
T Consensus 203 al~~~~~~~~~~~~~~~~~~~~~~~E~~~la~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~sm~~d~~---~~g~~--~ 276 (316)
T 2ew2_A 203 TILDCNIAEFGALPVSESLVKTLISEFAAVAEK-EAIYLDQAEVYTHIVQTYDPNGIGLHYPSMYQDLI---KNHRL--T 276 (316)
T ss_dssp HHHTCCHHHHHTSTTHHHHHHHHHHHHHHHHHH-TTCCCCHHHHHHHHHHTTCTTTTTTSCCHHHHHHT---TTCCC--C
T ss_pred HHhCCcHHHHHhCHHHHHHHHHHHHHHHHHHHH-cCCCCChHHHHHHHHHHhccccCCCCCcHHHHHHH---HcCCc--c
Confidence 4567889999999995 88886 45656543322111 11 2322220 12211 1
Q ss_pred CchhhHHHHHhhcccCchHHHHHHHHHcCCChhHHHHHHH
Q 041006 133 EGELVDKILDKTGMKGTGKWTIQQAAELLIAALTIAGSLD 172 (333)
Q Consensus 133 ~~~lvd~~~d~~~~k~~~~~~v~~A~~~GvplP~~~aAl~ 172 (333)
+ + .++...+++.|.++|+|+|.......
T Consensus 277 -----E-~------~~~~~~~~~~a~~~gv~~P~~~~~~~ 304 (316)
T 2ew2_A 277 -----E-I------DYINGAVWRKGQKYNVATPFCAMLTQ 304 (316)
T ss_dssp -----S-G------GGTHHHHHHHHHHHTCCCHHHHHHHH
T ss_pred -----h-H------HHHhhHHHHHHHHhCCCCCHHHHHHH
Confidence 1 1 13567889999999999998776544
No 46
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=98.12 E-value=2e-06 Score=84.70 Aligned_cols=141 Identities=10% Similarity=0.026 Sum_probs=100.8
Q ss_pred CccE-EecccCCCHHHHhcCC---------eecccCC-HHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHH
Q 041006 6 RVCL-ISAWGSPGARKARHGP---------SLMPGGS-FEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNG 74 (333)
Q Consensus 6 G~~~-ldapVSGg~~gA~~G~---------sim~GG~-~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~ 74 (333)
|..+ +|.+|+++|+.++.|. .+++|++ +++.+.++++++.++.. +.+ ++.+.+..+|++.|+
T Consensus 143 g~~~~~~~~v~~~Pe~~~~G~~~~~~~~~~~iv~G~~~~~~~~~~~~l~~~~~~~------v~~-~~~~~ae~~Kl~~N~ 215 (436)
T 1mv8_A 143 GKKAGVDFGVGTNPEFLRESTAIKDYDFPPMTVIGELDKQTGDLLEEIYRELDAP------IIR-KTVEVAEMIKYTCNV 215 (436)
T ss_dssp SCCBTTTBEEEECCCCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTTSSSC------EEE-EEHHHHHHHHHHHHH
T ss_pred CcccCCcEEEEECcccccccccchhccCCCEEEEEcCCHHHHHHHHHHHhccCCC------EEc-CCHHHHHHHHHHHHH
Confidence 4455 6788888888887775 4788887 99999999999998863 444 778889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHhccch-hhhhHHHHHHHHhcccCCCCCchhhHHHHHhhcccCchHHH
Q 041006 75 IEYGDMQLISEAYYLLKHVGGVSNAELAEIFDEWNKGE-LESFMVQITADIFKVKDEYGEGELVDKILDKTGMKGTGKWT 153 (333)
Q Consensus 75 l~~a~m~a~AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~-i~S~L~~i~~~il~~~d~~~~~~lvd~~~d~~~~k~~~~~~ 153 (333)
+....+..+.|...++++ .|+|.+++.++ ..... +. . ....+... ..+-.+.+. +|....
T Consensus 216 ~~a~~ia~~nE~~~l~~~-~Gid~~~v~~~---~~~~~r~~---~--~~~~~~pg----~g~gg~~~~------kD~~~l 276 (436)
T 1mv8_A 216 WHAAKVTFANEIGNIAKA-VGVDGREVMDV---ICQDHKLN---L--SRYYMRPG----FAFGGSCLP------KDVRAL 276 (436)
T ss_dssp HHHHHHHHHHHHHHHHHH-TTSCHHHHHHH---HTTCTTTT---T--SSTTCSCC----SCCCSSSHH------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-hCCCHHHHHHH---hcCCCCCC---C--cccCCCCc----ccccCcCcH------hhHHHH
Confidence 999999999999999995 99999988777 43321 10 0 00001110 011111111 135667
Q ss_pred HHHHHHcCCChhHHHHHHH
Q 041006 154 IQQAAELLIAALTIAGSLD 172 (333)
Q Consensus 154 v~~A~~~GvplP~~~aAl~ 172 (333)
+..|.++|+|+|++.++..
T Consensus 277 ~~~a~~~g~~~pl~~~v~~ 295 (436)
T 1mv8_A 277 TYRASQLDVEHPMLGSLMR 295 (436)
T ss_dssp HHHHHHTTCCCTTGGGHHH
T ss_pred HHHHHHcCCCcHHHHHHHH
Confidence 8899999999999877654
No 47
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=98.11 E-value=4.3e-06 Score=78.41 Aligned_cols=84 Identities=13% Similarity=0.161 Sum_probs=67.6
Q ss_pred cCCccEEecccCCCHHHHhcCC-eeccc--CCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHHHHH
Q 041006 4 VRRVCLISAWGSPGARKARHGP-SLMPG--GSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYGDM 80 (333)
Q Consensus 4 ~~G~~~ldapVSGg~~gA~~G~-sim~G--G~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a~m 80 (333)
..|++|++ ||++++ . .||+| ++++++++++|+++.++++ ++++|+. |++||.+.
T Consensus 125 ~~G~Hf~~-Pv~~~~------lveiv~g~~t~~~~~~~~~~l~~~lGk~------~v~v~d~------fi~Nrll~---- 181 (293)
T 1zej_A 125 FLGVHWMN-PPHVMP------LVEIVISRFTDSKTVAFVEGFLRELGKE------VVVCKGQ------SLVNRFNA---- 181 (293)
T ss_dssp EEEEEECS-STTTCC------EEEEEECTTCCHHHHHHHHHHHHHTTCE------EEEEESS------CHHHHHHH----
T ss_pred eEeEEecC-ccccCC------EEEEECCCCCCHHHHHHHHHHHHHcCCe------EEEeccc------ccHHHHHH----
Confidence 46899999 886631 3 46666 4999999999999999987 8999964 77888765
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHhccchhhh
Q 041006 81 QLISEAYYLLKHVGGVSNAELAEIFDEWNKGELES 115 (333)
Q Consensus 81 ~a~AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~i~S 115 (333)
..++|++.|+++ |+|+++|.++ ++.|...+
T Consensus 182 ~~~~EA~~l~~~--Gv~~e~id~~---~~~g~g~~ 211 (293)
T 1zej_A 182 AVLSEASRMIEE--GVRAEDVDRV---WKHHLGLL 211 (293)
T ss_dssp HHHHHHHHHHHH--TCCHHHHHHH---HHTTHHHH
T ss_pred HHHHHHHHHHHh--CCCHHHHHHH---HHhcCCCC
Confidence 468999999995 7799999998 76665444
No 48
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=98.09 E-value=5e-06 Score=77.24 Aligned_cols=141 Identities=11% Similarity=0.072 Sum_probs=90.1
Q ss_pred CCccEEecccCC--CHHHHhcCCee-c----ccCCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHH
Q 041006 5 RRVCLISAWGSP--GARKARHGPSL-M----PGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEY 77 (333)
Q Consensus 5 ~G~~~ldapVSG--g~~gA~~G~si-m----~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~ 77 (333)
+|+.+++++++| ....+..|..+ + .|++.+.+ +++++|+..+.+ +.+.++.+.+...|++.|.+..
T Consensus 137 ~g~~~~~a~~~~pg~~~~~~~g~~~~ig~~~~~~~~~~~-~~~~ll~~~g~~------~~~~~di~~~~~~Kl~~N~~~~ 209 (317)
T 2qyt_A 137 KGCVYISARKSAPGLITLEADRELFYFGSGLPEQTDDEV-RLAELLTAAGIR------AYNPTDIDWYIMKKFMMISVTA 209 (317)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEEECCSSSCCHHHH-HHHHHHHHTTCC------EECCSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEEcCCCEEEEcCCCceEEEcCCCCCCcCHHH-HHHHHHHHCCCC------CEEchHHHHHHHHHHHHHHhhH
Confidence 577889999985 23344455533 3 44568888 999999998865 7888988999999999999764
Q ss_pred H-------------------HHHHHHHHHHHHHHhCCCCHH--HHHHHHHHhcc--ch-hhhhHHHHHHHHhcccCCCCC
Q 041006 78 G-------------------DMQLISEAYYLLKHVGGVSNA--ELAEIFDEWNK--GE-LESFMVQITADIFKVKDEYGE 133 (333)
Q Consensus 78 a-------------------~m~a~AEg~~Ll~~~~Gld~~--~ia~I~~~w~~--G~-i~S~L~~i~~~il~~~d~~~~ 133 (333)
+ ...++.|++.++++ .|++++ .+.+++..... .. ..|.+.++. ..+.
T Consensus 210 ~~~al~g~~~g~~~~~~~~~~~~~~~E~~~v~~a-~G~~~~~~~~~~~~~~~~~~~~~~~~sm~~d~~----~g~~---- 280 (317)
T 2qyt_A 210 TATAYFDKPIGSILTEHEPELLSLLEEVAELFRA-KYGQVPDDVVQQLLDKQRKMPPESTSSMHSDFL----QGGS---- 280 (317)
T ss_dssp HHHHHHTSCHHHHHHHCHHHHHHHHHHHHHHHHH-HTSCCCSSHHHHHHHHHHHC-------------------------
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCCChHHHHHHHHHHhccCCCCCChHHHHHH----cCCc----
Confidence 3 44899999999996 888764 55555322110 00 001221111 1110
Q ss_pred chhhHHHHHhhcccCchHHHHHHHHHcCCChhHHHHHH
Q 041006 134 GELVDKILDKTGMKGTGKWTIQQAAELLIAALTIAGSL 171 (333)
Q Consensus 134 ~~lvd~~~d~~~~k~~~~~~v~~A~~~GvplP~~~aAl 171 (333)
.+ . .....++++.|.++|+|+|......
T Consensus 281 ---~E--~-----~~~~g~~~~~a~~~gv~~P~~~~~~ 308 (317)
T 2qyt_A 281 ---TE--V-----ETLTGYVVREAEALRVDLPMYKRMY 308 (317)
T ss_dssp -------------CTTTHHHHHHHHHTTCCCHHHHHHH
T ss_pred ---cC--H-----HHHhhHHHHHHHHcCCCCCHHHHHH
Confidence 00 0 0125578899999999999876643
No 49
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=97.97 E-value=2.4e-05 Score=76.23 Aligned_cols=97 Identities=10% Similarity=-0.015 Sum_probs=74.9
Q ss_pred cEEecccCCCHHHHhc---CC-eecccCCH-------HHHHHHHHHHHH-HhccCCCCCceEEeCCCChhhHHHHHHHHH
Q 041006 8 CLISAWGSPGARKARH---GP-SLMPGGSF-------EAYNNIQGILQK-VAAQVDDGPCVTYIGEGGSSNFVKMVHNGI 75 (333)
Q Consensus 8 ~~ldapVSGg~~gA~~---G~-sim~GG~~-------~a~~~v~pvL~~-i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l 75 (333)
.++.+|...++..+.. .+ .+|+||+. +..+.+.++|.. ...+ ..++++++.+++..+|+++|++
T Consensus 135 ~v~~~Pe~~~~G~a~~~~~~~~riviG~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~~~~di~~ae~~Kl~~N~~ 210 (402)
T 1dlj_A 135 RIIFSPEFLRESKALYDNLYPSRIIVSCEENDSPKVKADAEKFALLLKSAAKKN----NVPVLIMGASEAEAVKLFANTY 210 (402)
T ss_dssp CEEECCCCCCTTSTTHHHHSCSCEEEECCTTSCHHHHHHHHHHHHHHHHHCSCS----CCCEEEECHHHHHHHHHHHHHH
T ss_pred eEEECCccccCcchhhcccCCCEEEEeCCCcccchhHHHHHHHHHHHhhhhccC----CceEEecChHHHHHHHHHHHHH
Confidence 5778888877766653 23 59999998 555666666654 2211 1257889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHhccch
Q 041006 76 EYGDMQLISEAYYLLKHVGGVSNAELAEIFDEWNKGE 112 (333)
Q Consensus 76 ~~a~m~a~AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~ 112 (333)
....+..+.|...++++ .|+|..++.++ ++.+.
T Consensus 211 ~a~~ia~~nE~~~l~~~-~Gid~~~v~~~---~~~~~ 243 (402)
T 1dlj_A 211 LALRVAYFNELDTYAES-RKLNSHMIIQG---ISYDD 243 (402)
T ss_dssp HHHHHHHHHHHHHHHHH-TTCCHHHHHHH---HHTST
T ss_pred HHHHHHHHHHHHHHHHH-hCCCHHHHHHH---hccCC
Confidence 99999999999999995 99999999888 55443
No 50
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=97.95 E-value=3.9e-05 Score=69.51 Aligned_cols=88 Identities=15% Similarity=0.148 Sum_probs=72.1
Q ss_pred CCccEEecccCCCHHHHhcCC-eecccC--CHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHH--HHHHHHHH
Q 041006 5 RRVCLISAWGSPGARKARHGP-SLMPGG--SFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMV--HNGIEYGD 79 (333)
Q Consensus 5 ~G~~~ldapVSGg~~gA~~G~-sim~GG--~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv--~N~l~~a~ 79 (333)
++.++++ +++|.+..+..|. .+++|+ +++.++.++++|+.++ + ++++++.....++++. .|++.+..
T Consensus 104 ~~~~~v~-~~p~~~~~~~~g~~~i~~~~~~~~~~~~~~~~ll~~~G-~------~~~~~~~~~d~~~al~g~~~~~~~~~ 175 (259)
T 2ahr_A 104 QDLPLLR-IMPNMNAQILQSSTALTGNALVSQELQARVRDLTDSFG-S------TFDISEKDFDTFTALAGSSPAYIYLF 175 (259)
T ss_dssp TTSCEEE-EECCGGGGGTCEEEEEEECTTCCHHHHHHHHHHHHTTE-E------EEECCGGGHHHHHHHHTTHHHHHHHH
T ss_pred CCCCEEE-EcCCchHHHcCceEEEEcCCCCCHHHHHHHHHHHHhCC-C------EEEecHHHccHHHHHhccHHHHHHHH
Confidence 3567888 8899999888898 678887 9999999999999999 4 7899987777777763 45667777
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHH
Q 041006 80 MQLISEAYYLLKHVGGVSNAELAEI 104 (333)
Q Consensus 80 m~a~AEg~~Ll~~~~Gld~~~ia~I 104 (333)
+.+++|+ +.+ .|+|.+++.++
T Consensus 176 ~~~la~~---~~~-~Gl~~~~~~~~ 196 (259)
T 2ahr_A 176 IEALAKA---GVK-NGIPKAKALEI 196 (259)
T ss_dssp HHHHHHH---HHH-TTCCHHHHHHH
T ss_pred HHHHHHH---HHH-cCCCHHHHHHH
Confidence 8888887 453 89999999888
No 51
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=97.79 E-value=4.3e-05 Score=72.29 Aligned_cols=85 Identities=18% Similarity=0.149 Sum_probs=66.8
Q ss_pred CCccEEecccCCCHHHHhcCC--eeccc--CCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHHHHH
Q 041006 5 RRVCLISAWGSPGARKARHGP--SLMPG--GSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYGDM 80 (333)
Q Consensus 5 ~G~~~ldapVSGg~~gA~~G~--sim~G--G~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a~m 80 (333)
.|++|++.| +. ++ .||+| ++++++++++++++.++++ ++++|+.+.|. ++||.+.
T Consensus 142 ig~Hp~~P~-~~-------~~lveiv~g~~t~~e~~~~~~~l~~~lGk~------~v~v~~~~~Gf---i~Nrll~---- 200 (319)
T 2dpo_A 142 IVAHPVNPP-YY-------IPLVELVPHPETSPATVDRTHALMRKIGQS------PVRVLKEIDGF---VLNRLQY---- 200 (319)
T ss_dssp EEEEECSST-TT-------CCEEEEEECTTCCHHHHHHHHHHHHHTTCE------EEECSSCCTTT---THHHHHH----
T ss_pred EEeecCCch-hh-------cceEEEeCCCCCCHHHHHHHHHHHHHcCCE------EEEECCCcCCc---hHHHHHH----
Confidence 467777743 32 33 57888 8999999999999999987 89999888886 4566554
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHhccchhh
Q 041006 81 QLISEAYYLLKHVGGVSNAELAEIFDEWNKGELE 114 (333)
Q Consensus 81 ~a~AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~i~ 114 (333)
..++|++.|+++ .++|+++|.++ ++.|...
T Consensus 201 a~~~EA~~l~~~-g~~~~~~id~a---~~~g~g~ 230 (319)
T 2dpo_A 201 AIISEAWRLVEE-GIVSPSDLDLV---MSDGLGM 230 (319)
T ss_dssp HHHHHHHHHHHT-TSSCHHHHHHH---HHTTHHH
T ss_pred HHHHHHHHHHHh-CCCCHHHHHHH---HHhCCCC
Confidence 358999999996 78899999999 7666544
No 52
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=97.74 E-value=2e-05 Score=71.68 Aligned_cols=90 Identities=12% Similarity=-0.032 Sum_probs=66.5
Q ss_pred CCccEEecccCCCHHHHhcCCeecc-cCCHHHHHHHHHHHHHHhccCCCCCceEEeCCCC---hhhHHHHHHHHHHHHHH
Q 041006 5 RRVCLISAWGSPGARKARHGPSLMP-GGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGG---SSNFVKMVHNGIEYGDM 80 (333)
Q Consensus 5 ~G~~~ldapVSGg~~gA~~G~sim~-GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~G---aG~~vKlv~N~l~~a~m 80 (333)
.++.+.++|++|++..+..+..+++ |+++++++.++++|+.++.+ ++++++.+ ....+|+++|+. +.+
T Consensus 117 ~~~~~~~~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~g~~------~~~~~~~~~~~~~~~~~l~~~~~--~~~ 188 (266)
T 3d1l_A 117 YGVFYPMQTFSKQREVDFKEIPFFIEASSTEDAAFLKAIASTLSNR------VYDADSEQRKSLHLAAVFTCNFT--NHM 188 (266)
T ss_dssp EEEEEECCCC---CCCCCTTCCEEEEESSHHHHHHHHHHHHTTCSC------EEECCHHHHHHHHHHHHHHHHHH--HHH
T ss_pred ccCcCCceecCCCchhhcCCCeEEEecCCHHHHHHHHHHHHhcCCc------EEEeCHHHHHHHHHHHHHHHHHH--HHH
Confidence 3667889999986543333334444 99999999999999999976 89999765 456799999984 556
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHH
Q 041006 81 QLISEAYYLLKHVGGVSNAELAEIF 105 (333)
Q Consensus 81 ~a~AEg~~Ll~~~~Gld~~~ia~I~ 105 (333)
..++|+ |++ ..|+|++++.+++
T Consensus 189 ~~~~ea--l~~-~~Gl~~~~~~~l~ 210 (266)
T 3d1l_A 189 YALAAE--LLK-KYNLPFDVMLPLI 210 (266)
T ss_dssp HHHHHH--HHH-HTTCCGGGGHHHH
T ss_pred HHHHHH--HHH-HcCCCHHHHHHHH
Confidence 778887 456 4899999888873
No 53
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=97.68 E-value=0.00028 Score=63.78 Aligned_cols=81 Identities=16% Similarity=0.161 Sum_probs=63.9
Q ss_pred CccEEecccCCCHHHHhcCC-eecccC--CHHHHHHHHHHHHHHhccCCCCCceEEeC-C---------CChhhHHHHHH
Q 041006 6 RVCLISAWGSPGARKARHGP-SLMPGG--SFEAYNNIQGILQKVAAQVDDGPCVTYIG-E---------GGSSNFVKMVH 72 (333)
Q Consensus 6 G~~~ldapVSGg~~gA~~G~-sim~GG--~~~a~~~v~pvL~~i~~~~~~~p~v~~~G-~---------~GaG~~vKlv~ 72 (333)
+.+++++ +++.+..+..|. .+++|+ +++.++.++++|+.++.+ + +++ + .|++.
T Consensus 103 ~~~~v~~-~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~l~~~~g~~------~-~~~~~~~~~~~~al~g~~~------ 168 (263)
T 1yqg_A 103 TRRIVRV-MPNTPGKIGLGVSGMYAEAEVSETDRRIADRIMKSVGLT------V-WLDDEEKMHGITGISGSGP------ 168 (263)
T ss_dssp CCCEEEE-ECCGGGGGTCEEEEEECCTTSCHHHHHHHHHHHHTTEEE------E-ECSSTTHHHHHHHHTTSHH------
T ss_pred CCcEEEE-cCCHHHHHcCceEEEEcCCCCCHHHHHHHHHHHHhCCCE------E-EeCChhhccHHHHHHccHH------
Confidence 5789999 999999888888 788998 999999999999999874 5 898 6 44442
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 041006 73 NGIEYGDMQLISEAYYLLKHVGGVSNAELAEIF 105 (333)
Q Consensus 73 N~l~~a~m~a~AEg~~Ll~~~~Gld~~~ia~I~ 105 (333)
+..+..+.+++|+ +++ .|++++++.++.
T Consensus 169 -~~~~~~~~~l~e~---~~~-~G~~~~~~~~~~ 196 (263)
T 1yqg_A 169 -AYVFYLLDALQNA---AIR-QGFDMAEARALS 196 (263)
T ss_dssp -HHHHHHHHHHHHH---HHH-TTCCHHHHHHHH
T ss_pred -HHHHHHHHHHHHH---HHH-cCCCHHHHHHHH
Confidence 3356666777777 553 899999888873
No 54
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=97.46 E-value=9.7e-05 Score=64.62 Aligned_cols=69 Identities=12% Similarity=-0.034 Sum_probs=59.8
Q ss_pred CccEEec--ccCCCHHHH--hcCC-eecccCC-HHHHHHHHHHHHHH-hccCCCCCceEEeCCCChhhHHHHHHHHHHHH
Q 041006 6 RVCLISA--WGSPGARKA--RHGP-SLMPGGS-FEAYNNIQGILQKV-AAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYG 78 (333)
Q Consensus 6 G~~~lda--pVSGg~~gA--~~G~-sim~GG~-~~a~~~v~pvL~~i-~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a 78 (333)
+.+++++ |+++....+ ..|. +++++|+ +++++.++++|+.+ +.+ +.++|+.++++.+|++.|++.+.
T Consensus 125 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~l~~~~~G~~------~~~~~~~~~a~~~k~~~~~~~~~ 198 (212)
T 1jay_A 125 SEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLR------PLDAGPLSNSRLVESLTPLILNI 198 (212)
T ss_dssp CSCEEECCTTCCHHHHHCTTCCCCEEEEEEESCHHHHHHHHHHHHHSTTEE------EEEEESGGGHHHHHTHHHHHHHH
T ss_pred CCeEEEEccchHHHHhhCcCCCCCccEEEECCcHHHHHHHHHHHHHcCCCC------ceeccchhHHHHhcchHHHHHHH
Confidence 4689999 888887776 7777 8898997 99999999999999 875 88999999999999999998775
Q ss_pred HH
Q 041006 79 DM 80 (333)
Q Consensus 79 ~m 80 (333)
.+
T Consensus 199 ~~ 200 (212)
T 1jay_A 199 MR 200 (212)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 55
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=96.56 E-value=2e-05 Score=69.64 Aligned_cols=61 Identities=8% Similarity=0.041 Sum_probs=52.2
Q ss_pred CCccEEecccCCCHH----------HHhcCC------eecccCCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHH
Q 041006 5 RRVCLISAWGSPGAR----------KARHGP------SLMPGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFV 68 (333)
Q Consensus 5 ~G~~~ldapVSGg~~----------gA~~G~------sim~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~v 68 (333)
.+..+|++|++|+.. .++.|. ++|+|++++++++++|+|+.+|.+ ++++|+.|+|+.+
T Consensus 116 ~~~~~l~~~~~~~~vvra~~n~~a~~~~~g~l~g~~~~~~~g~~~~~~~~v~~ll~~~G~~------~~~~G~l~~a~~~ 189 (201)
T 2yjz_A 116 SNAEYLAQLVPGAHVVKAFNTISAWALQSGTLDASRQVFVCGNDSKAKDRVMDIARTLGLT------PLDQGSLVAAKEI 189 (201)
Confidence 467899999988755 444454 789999999999999999999987 8999999999999
Q ss_pred HHH
Q 041006 69 KMV 71 (333)
Q Consensus 69 Klv 71 (333)
|.+
T Consensus 190 e~~ 192 (201)
T 2yjz_A 190 ENY 192 (201)
Confidence 975
No 56
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=97.31 E-value=7.7e-05 Score=70.37 Aligned_cols=85 Identities=11% Similarity=-0.087 Sum_probs=57.6
Q ss_pred ecccCCCHHHHh---cCC-eecccCCHHHHHHHHHHHHHHhccCCCCCceEEeCCC-----------------ChhhHHH
Q 041006 11 SAWGSPGARKAR---HGP-SLMPGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEG-----------------GSSNFVK 69 (333)
Q Consensus 11 dapVSGg~~gA~---~G~-sim~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~-----------------GaG~~vK 69 (333)
+++|.++|..++ .|. +.++.|+.+ +++++++|+..+-+ +.+.++. |.+.-+|
T Consensus 133 ~~~~~~~P~~~~~~~~g~~~~~~~g~~~-~~~~~~ll~~~g~~------~~~~~di~~~~~~k~l~N~~~~~~g~~~g~~ 205 (335)
T 1z82_A 133 PYAVLSGPSHAEEVAKKLPTAVTLAGEN-SKELQKRISTEYFR------VYTCEDVVGVEIAGALKNVIAIAAGILDGFG 205 (335)
T ss_dssp CEEEEESSCCHHHHHTTCCEEEEEEETT-HHHHHHHHCCSSEE------EEEESCHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ceEEEECCccHHHHhCCCceEEEEEehh-HHHHHHHhCCCCEE------EEecCchHHHHHHHHHHhHHHHHHHHHhcCC
Confidence 456666665554 565 544444444 89999999987764 5555542 1223344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHH
Q 041006 70 MVHNGIEYGDMQLISEAYYLLKHVGGVSNAELAE 103 (333)
Q Consensus 70 lv~N~l~~a~m~a~AEg~~Ll~~~~Gld~~~ia~ 103 (333)
+.+|.+....+.+++|++.++++ .|++++.+.+
T Consensus 206 ~~~n~~~a~~~~~~~E~~~la~a-~G~~~~~~~~ 238 (335)
T 1z82_A 206 GWDNAKAALETRGIYEIARFGMF-FGADQKTFMG 238 (335)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHH-TTCCHHHHTS
T ss_pred CCchhHHHHHHHHHHHHHHHHHH-hCCChhhhcc
Confidence 55787788889999999999995 9999887644
No 57
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=97.21 E-value=0.00048 Score=65.53 Aligned_cols=70 Identities=13% Similarity=-0.024 Sum_probs=52.8
Q ss_pred eecccCCHHHHHHHHHHHHHH--hccCCCCCceEEeCCC---ChhhHH--------------HHHHHHHHHHHHHHHHHH
Q 041006 26 SLMPGGSFEAYNNIQGILQKV--AAQVDDGPCVTYIGEG---GSSNFV--------------KMVHNGIEYGDMQLISEA 86 (333)
Q Consensus 26 sim~GG~~~a~~~v~pvL~~i--~~~~~~~p~v~~~G~~---GaG~~v--------------Klv~N~l~~a~m~a~AEg 86 (333)
.++.+++++.+++++++|+.+ +-+ +.+.++. ..+.++ |+.+|.+....+.+++|+
T Consensus 168 ~~~~~~~~~~~~~v~~ll~~~g~g~~------~~~~~di~~~~~~k~~~n~~~~~~~~~~~~~~~~n~~~~~~~~~~~E~ 241 (366)
T 1evy_A 168 VSIASADINVARRLQRIMSTGDRSFV------CWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEI 241 (366)
T ss_dssp EEEECSSHHHHHHHHHHHSCTTSSEE------EEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred EEEecCCHHHHHHHHHHhcCCCCeEE------EEEcCCchHHHHHHHHHhHHHHHHHHHhhccCCccHHHHHHHHHHHHH
Confidence 456778899999999999988 654 6666653 223333 344788888899999999
Q ss_pred HHHHHHhCCCCHHHHH
Q 041006 87 YYLLKHVGGVSNAELA 102 (333)
Q Consensus 87 ~~Ll~~~~Gld~~~ia 102 (333)
+.++++ .|++++.+.
T Consensus 242 ~~la~a-~Gi~~~~~~ 256 (366)
T 1evy_A 242 RDLTAA-LGGDGSAVF 256 (366)
T ss_dssp HHHHHH-TTCCCTTTT
T ss_pred HHHHHH-hCCCCcccc
Confidence 999996 999986643
No 58
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=97.15 E-value=0.0023 Score=59.54 Aligned_cols=70 Identities=13% Similarity=-0.039 Sum_probs=54.0
Q ss_pred eeccc-CCHHHHHHHHHHHHHHhccCCCCCceEEeCCC-----------------ChhhHHHHH-----HHHHHHHHHHH
Q 041006 26 SLMPG-GSFEAYNNIQGILQKVAAQVDDGPCVTYIGEG-----------------GSSNFVKMV-----HNGIEYGDMQL 82 (333)
Q Consensus 26 sim~G-G~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~-----------------GaG~~vKlv-----~N~l~~a~m~a 82 (333)
.+++| ++++.+++++++|+..+.+ +.+.++. |+...+|+. +|.+......+
T Consensus 151 ~~~~~~~~~~~~~~~~~ll~~~g~~------~~~~~di~~~~~~k~~~N~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~ 224 (335)
T 1txg_A 151 TVVFSSPSESSANKMKEIFETEYFG------VEVTTDIIGTEITSALKNVYSIAIAWIRGYESRKNVEMSNAKGVIATRA 224 (335)
T ss_dssp EEEEECSCHHHHHHHHHHHCBTTEE------EEEESCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHH
T ss_pred EEEEEeCCHHHHHHHHHHhCCCcEE------EEecCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence 34454 5789999999999988765 6777764 333445777 88888888999
Q ss_pred HHHHHHHHHHhCCCCHHHHH
Q 041006 83 ISEAYYLLKHVGGVSNAELA 102 (333)
Q Consensus 83 ~AEg~~Ll~~~~Gld~~~ia 102 (333)
+.|++.++++ .|++++++.
T Consensus 225 ~~E~~~la~~-~G~~~~~~~ 243 (335)
T 1txg_A 225 INEMAELIEI-LGGDRETAF 243 (335)
T ss_dssp HHHHHHHHHH-HTSCGGGGG
T ss_pred HHHHHHHHHH-HCCCcchhh
Confidence 9999999995 899987653
No 59
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=97.05 E-value=0.00081 Score=64.41 Aligned_cols=155 Identities=12% Similarity=-0.059 Sum_probs=96.1
Q ss_pred CCccEEecccCCCHHHHhcCC-eecccCCHHHHHHHHHHHHHHhccCCCCCceEEeCC-----------------CChhh
Q 041006 5 RRVCLISAWGSPGARKARHGP-SLMPGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGE-----------------GGSSN 66 (333)
Q Consensus 5 ~G~~~ldapVSGg~~gA~~G~-sim~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~-----------------~GaG~ 66 (333)
..+.+++.|....+..+...+ .++.+++++..++++++|+..+-+ +++..+ .|.+.
T Consensus 154 ~~~~vlsgP~~a~ev~~g~pt~~via~~~~~~~~~v~~lf~~~~~r------v~~~~Di~g~e~~galkNviaia~G~~~ 227 (356)
T 3k96_A 154 VPMAVISGPSLATEVAANLPTAVSLASNNSQFSKDLIERLHGQRFR------VYKNDDMIGVELCGSVKNILAIATGISD 227 (356)
T ss_dssp CCEEEEESSCCHHHHHTTCCEEEEEEESCHHHHHHHHHHHCCSSEE------EEEESCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECccHHHHHHcCCCeEEEEecCCHHHHHHHHHHhCCCCee------EEEeCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 356788999888766554444 567788999999999999976654 444444 13444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHhccchhh----hhHHHHH--HHHhcccCCCCCchhhHHH
Q 041006 67 FVKMVHNGIEYGDMQLISEAYYLLKHVGGVSNAELAEIFDEWNKGELE----SFMVQIT--ADIFKVKDEYGEGELVDKI 140 (333)
Q Consensus 67 ~vKlv~N~l~~a~m~a~AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~i~----S~L~~i~--~~il~~~d~~~~~~lvd~~ 140 (333)
-+|+..|+....+..+++|...|+++ .|.+++.+... =--|.+. |.+.+.. ...+-+.. .++.+
T Consensus 228 gl~~g~N~~aal~~~~l~E~~~l~~a-~G~~~~t~~gl---~g~gDl~~tc~s~~sRN~~~G~~l~~g~------~~~~~ 297 (356)
T 3k96_A 228 GLKLGSNARAALITRGLTEMGRLVSV-FGGKQETLTGL---AGLGDLVLTCTDNQSRNRRFGLALGEGV------DKKEA 297 (356)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHHHHHH-TTCCHHHHTST---TTHHHHHHHHHCTTCHHHHHHHHHHHTC------CHHHH
T ss_pred hccCCchHHHHHHHHHHHHHHHHHHH-hCCChHhhccc---chhhHHHHhccCCCCccHHHHHHHHCCC------CHHHH
Confidence 56778888889999999999999996 99999886532 0001111 1111111 11222211 12222
Q ss_pred HHhhccc----CchHHHHHHHHHcCCChhHHHHHHHHHHH
Q 041006 141 LDKTGMK----GTGKWTIQQAAELLIAALTIAGSLDCRYL 176 (333)
Q Consensus 141 ~d~~~~k----~~~~~~v~~A~~~GvplP~~~aAl~~r~~ 176 (333)
.+...+. .|.+.+.+.|.+.||++|++.+ +...++
T Consensus 298 ~~~~~~~~eG~~t~~~~~~la~~~~v~~Pi~~~-v~~il~ 336 (356)
T 3k96_A 298 QQAIGQAIEGLYNTDQVHALAQKHAIEMPLTFQ-VHRILH 336 (356)
T ss_dssp HHHHCSCCSHHHHHHHHHHHHHHTTCCCHHHHH-HHHHHH
T ss_pred HHHcCCccchHHHHHHHHHHHHHcCCCCcHHHH-HHHHHh
Confidence 2222221 1345688899999999997655 443333
No 60
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=96.94 E-value=0.0011 Score=65.99 Aligned_cols=78 Identities=12% Similarity=0.009 Sum_probs=63.9
Q ss_pred CCccEEe-cccCCCHHHHhcCC-eecccC---CHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHHHH
Q 041006 5 RRVCLIS-AWGSPGARKARHGP-SLMPGG---SFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYGD 79 (333)
Q Consensus 5 ~G~~~ld-apVSGg~~gA~~G~-sim~GG---~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a~ 79 (333)
.|.+|++ +||+ + ..|++| ++++++.++++++.++++ ++++|+.. | +++||.+..
T Consensus 139 ig~hf~~Pa~v~---------~Lvevv~g~~Ts~e~~~~~~~l~~~lGk~------~v~v~d~~-G---fi~Nr~l~~-- 197 (483)
T 3mog_A 139 AGLHFFNPAPVM---------KLVEVVSGLATAAEVVEQLCELTLSWGKQ------PVRCHSTP-G---FIVNRVARP-- 197 (483)
T ss_dssp EEEEECSSTTTC---------CEEEEEECSSCCHHHHHHHHHHHHHTTCE------EEEEESCT-T---TTHHHHTHH--
T ss_pred EEeeecChhhhC---------CeEEEecCCCCCHHHHHHHHHHHHHhCCE------EEEEeccC-c---chHHHHHHH--
Confidence 4677777 6665 6 778888 899999999999999986 88999742 4 778877665
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 041006 80 MQLISEAYYLLKHVGGVSNAELAEIFD 106 (333)
Q Consensus 80 m~a~AEg~~Ll~~~~Gld~~~ia~I~~ 106 (333)
.+.|++.|+++ .+.|+++|.+++.
T Consensus 198 --~~~Ea~~l~~~-g~~~~~~id~a~~ 221 (483)
T 3mog_A 198 --YYSEAWRALEE-QVAAPEVIDAALR 221 (483)
T ss_dssp --HHHHHHHHHHT-TCSCHHHHHHHHH
T ss_pred --HHHHHHHHHHh-CCCCHHHHHHHHH
Confidence 57999999996 8899999999943
No 61
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=96.64 E-value=0.0032 Score=57.59 Aligned_cols=81 Identities=9% Similarity=-0.090 Sum_probs=59.4
Q ss_pred cEEecccCCCHHHHh--cCCeecccCCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChh---hHHHHHHHHHHHHHHHH
Q 041006 8 CLISAWGSPGARKAR--HGPSLMPGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSS---NFVKMVHNGIEYGDMQL 82 (333)
Q Consensus 8 ~~ldapVSGg~~gA~--~G~sim~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG---~~vKlv~N~l~~a~m~a 82 (333)
.+..+|++|++..++ .+..++++|+++.++.++++|+.++.+ ++++++.+.. ...+++.|.+.+ .
T Consensus 105 ~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lG~~------~~~v~~~~~~~~~~~~~l~~n~~~~----~ 174 (276)
T 2i76_A 105 IHPNFSFSSLEKALEMKDQIVFGLEGDERGLPIVKKIAEEISGK------YFVIPSEKKKAYHLAAVIASNFPVA----L 174 (276)
T ss_dssp EEECSCC--CTTGGGCGGGCCEEECCCTTTHHHHHHHHHHHCSC------EEECCGGGHHHHHHHHHHHHTTHHH----H
T ss_pred cchhhhcCCCchhHHHhCCCeEEEEeChHHHHHHHHHHHHhCCC------EEEECHHHHHHHHHHHHHHHHHHHH----H
Confidence 456778999776665 344788999999999999999999976 8999975432 345777776543 4
Q ss_pred HHHHHHHHHHhCCCCHH
Q 041006 83 ISEAYYLLKHVGGVSNA 99 (333)
Q Consensus 83 ~AEg~~Ll~~~~Gld~~ 99 (333)
++|+..++.+ .|++.+
T Consensus 175 ~~~a~~~~~~-~Gl~~~ 190 (276)
T 2i76_A 175 AYLSKRIYTL-LGLDEP 190 (276)
T ss_dssp HHHHHHHHHT-TTCSCH
T ss_pred HHHHHHHHHH-cCCChH
Confidence 6777788884 899987
No 62
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=96.59 E-value=0.0054 Score=58.53 Aligned_cols=84 Identities=14% Similarity=0.016 Sum_probs=59.9
Q ss_pred ecccCCCHHHHh---cCC---eecccCCHHHHHHHHHHHHHHhccCCCCCceEEeCCC---ChhhHHH------------
Q 041006 11 SAWGSPGARKAR---HGP---SLMPGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEG---GSSNFVK------------ 69 (333)
Q Consensus 11 dapVSGg~~gA~---~G~---sim~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~---GaG~~vK------------ 69 (333)
+++|.+|+..++ .|. .++.+++++.+++++++|+..+-+ +.+.++. .-+..+|
T Consensus 165 ~~~v~~gp~~a~~v~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~~------~~~~~di~~~~~~k~l~N~~~~~~g~~~~ 238 (375)
T 1yj8_A 165 PCSALSGANIAMDVAMENFSEATIGGNDKDSLVIWQRVFDLPYFK------INCVNETIEVEICGALKNIITLACGFCDG 238 (375)
T ss_dssp CEEEEECSCCHHHHHTTCCEEEEEECSCHHHHHHHHHHHCBTTEE------EEEESCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCchHHHHHhCCCeEEEEecCCHHHHHHHHHHhCCCCeE------EEEeCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 345555554443 332 466788899999999999988765 6777764 2233333
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHHhC--CCCHHHH
Q 041006 70 --MVHNGIEYGDMQLISEAYYLLKHVG--GVSNAEL 101 (333)
Q Consensus 70 --lv~N~l~~a~m~a~AEg~~Ll~~~~--Gld~~~i 101 (333)
+.+|.+....+.+++|++.++++ . |++++.+
T Consensus 239 ~~~~~n~~~a~~~~~~~E~~~la~a-~G~G~~~~~~ 273 (375)
T 1yj8_A 239 LNLPTNSKSAIIRNGINEMILFGKV-FFQKFNENIL 273 (375)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHH-HSSCCCGGGG
T ss_pred ccCChhHHHHHHHHHHHHHHHHHHH-hccCCCcchh
Confidence 33788888899999999999996 6 6987665
No 63
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=96.36 E-value=0.0082 Score=56.45 Aligned_cols=84 Identities=15% Similarity=-0.039 Sum_probs=59.6
Q ss_pred ecccCCCHHHHh---cCC---eecccCCHHHHHHHHHHHHHHhccCCCCCceEEeCCC---ChhhHHHHH----------
Q 041006 11 SAWGSPGARKAR---HGP---SLMPGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEG---GSSNFVKMV---------- 71 (333)
Q Consensus 11 dapVSGg~~gA~---~G~---sim~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~---GaG~~vKlv---------- 71 (333)
+++|.+|+..++ .|. .++.+++++.+++++++|+..+.+ +.+.++. .-+.++|.+
T Consensus 148 ~~~v~~gp~~a~~v~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~~------~~~~~di~~~~~~k~~~N~~~~~~g~~~~ 221 (354)
T 1x0v_A 148 PMSVLMGANIASEVADEKFCETTIGCKDPAQGQLLKELMQTPNFR------ITVVQEVDTVEICGALKNVVAVGAGFCDG 221 (354)
T ss_dssp CEEEEECSCCHHHHHTTCCEEEEEECSSHHHHHHHHHHHCBTTEE------EEEESCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHhcCCceEEEEECCHHHHHHHHHHhCCCCEE------EEEcCCchHhHHHHHHHHHHHHHHHHHHH
Confidence 355666665444 353 356677899999999999988765 6677663 223333322
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHHhCCC---CHHHH
Q 041006 72 ----HNGIEYGDMQLISEAYYLLKHVGGV---SNAEL 101 (333)
Q Consensus 72 ----~N~l~~a~m~a~AEg~~Ll~~~~Gl---d~~~i 101 (333)
+|........++.|++.++++ .|+ +++++
T Consensus 222 ~~~~~n~~~~~~~~~~~E~~~la~a-~G~~~~~~~~~ 257 (354)
T 1x0v_A 222 LGFGDNTKAAVIRLGLMEMIAFAKL-FCSGPVSSATF 257 (354)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHH-HSSSCCCGGGG
T ss_pred ccCCccHHHHHHHHHHHHHHHHHHH-hcCCCCCcccc
Confidence 787888889999999999996 888 87664
No 64
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=96.34 E-value=0.013 Score=58.12 Aligned_cols=79 Identities=10% Similarity=0.079 Sum_probs=60.5
Q ss_pred CCccEEecccCCCHHHHhcCC--eecccC--CHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHHHHH
Q 041006 5 RRVCLISAWGSPGARKARHGP--SLMPGG--SFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYGDM 80 (333)
Q Consensus 5 ~G~~~ldapVSGg~~gA~~G~--sim~GG--~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a~m 80 (333)
.|.+|++ ||+ .++ .|++|. +++++++++++++.++++ ++++|+ +.|. ++|+.+. .
T Consensus 185 iG~Hffn-Pv~-------~m~LvEIv~g~~Ts~e~~~~~~~l~~~lGk~------~v~v~d-~pGf---i~Nril~-~-- 243 (460)
T 3k6j_A 185 VGIHFFN-PAN-------VIRLVEIIYGSHTSSQAIATAFQACESIKKL------PVLVGN-CKSF---VFNRLLH-V-- 243 (460)
T ss_dssp EEEECCS-STT-------TCCEEEEECCSSCCHHHHHHHHHHHHHTTCE------EEEESS-CCHH---HHHHHHH-H--
T ss_pred EEEEecc-hhh-------hCCEEEEEeCCCCCHHHHHHHHHHHHHhCCE------EEEEec-ccHH---HHHHHHH-H--
Confidence 4677777 775 344 466663 899999999999999987 889996 5563 4555554 3
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHH
Q 041006 81 QLISEAYYLLKHVGGVSNAELAEIFD 106 (333)
Q Consensus 81 ~a~AEg~~Ll~~~~Gld~~~ia~I~~ 106 (333)
.+.|++.|+++ .|+|+++|.+++.
T Consensus 244 -~~~EA~~l~~~-~Ga~~e~ID~a~~ 267 (460)
T 3k6j_A 244 -YFDQSQKLMYE-YGYLPHQIDKIIT 267 (460)
T ss_dssp -HHHHHHHHHHT-SCCCHHHHHHHHH
T ss_pred -HHHHHHHHHHH-cCCCHHHHHHHHH
Confidence 47899999974 7999999999954
No 65
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=96.25 E-value=0.007 Score=54.35 Aligned_cols=71 Identities=11% Similarity=0.076 Sum_probs=55.7
Q ss_pred cCCeecccC---CHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHH--HHHHHHHHHHHHHHHHHHHHHhCCCC
Q 041006 23 HGPSLMPGG---SFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMV--HNGIEYGDMQLISEAYYLLKHVGGVS 97 (333)
Q Consensus 23 ~G~sim~GG---~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv--~N~l~~a~m~a~AEg~~Ll~~~~Gld 97 (333)
.|.++|++| +++.++.++++|+.++. ++++++.....++++. .|++.+..+.+++|+ +. ..|++
T Consensus 122 ~g~~~~~~~~~~~~~~~~~~~~ll~~~G~-------~~~~~~~~~~~~~a~~~~~~~~~~~~~~al~~~---~~-~~Gl~ 190 (262)
T 2rcy_A 122 EGSFIYCSNKNVNSTDKKYVNDIFNSCGI-------IHEIKEKDMDIATAISGCGPAYVYLFIESLIDA---GV-KNGLS 190 (262)
T ss_dssp CEEEEEEECTTCCHHHHHHHHHHHHTSEE-------EEECCGGGHHHHHHHTTSHHHHHHHHHHHHHHH---HH-HTTCC
T ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHhCCC-------EEEeCHHHccHHHHHHccHHHHHHHHHHHHHHH---HH-HcCCC
Confidence 466667666 79999999999999985 7899987666777764 477778888888777 35 48999
Q ss_pred HHHHHHH
Q 041006 98 NAELAEI 104 (333)
Q Consensus 98 ~~~ia~I 104 (333)
.++..++
T Consensus 191 ~~~~~~~ 197 (262)
T 2rcy_A 191 RELSKNL 197 (262)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9887777
No 66
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=95.90 E-value=0.0023 Score=56.44 Aligned_cols=45 Identities=18% Similarity=0.127 Sum_probs=38.8
Q ss_pred HhcCC--eecccCCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHH
Q 041006 21 ARHGP--SLMPGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMV 71 (333)
Q Consensus 21 A~~G~--sim~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv 71 (333)
+..|+ .+++|+++++++.++++|+.++.+ ++++|+.|+|+.++.+
T Consensus 158 ~~~g~~~~~~~g~~~~~~~~v~~ll~~~G~~------~~~~g~~~~~~~~e~~ 204 (215)
T 2vns_A 158 PRDGNRQVPICGDQPEAKRAVSEMALAMGFM------PVDMGSLASAWEVEAM 204 (215)
T ss_dssp SCSSCCEEEEEESCHHHHHHHHHHHHHTTCE------EEECCSGGGHHHHHHS
T ss_pred ccCCceeEEEecCCHHHHHHHHHHHHHcCCc------eEeecchhhhhHhhhh
Confidence 33454 688999999999999999999986 8999999999998754
No 67
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=95.86 E-value=0.039 Score=51.49 Aligned_cols=138 Identities=12% Similarity=0.118 Sum_probs=76.6
Q ss_pred cEEecccCCCHHHHhcCCeecccCC---HHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHH--HHHHHHHHHHH
Q 041006 8 CLISAWGSPGARKARHGPSLMPGGS---FEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMV--HNGIEYGDMQL 82 (333)
Q Consensus 8 ~~ldapVSGg~~gA~~G~sim~GG~---~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv--~N~l~~a~m~a 82 (333)
.++.+.. ..+.....|.+++++|+ ++.++.++++|+.++.. .++.+.....+..+. -+++.+..+.+
T Consensus 138 ~vv~~~p-~~p~~~~~g~~v~~~g~~~~~~~~~~v~~ll~~~G~~-------~~~~e~~~~~~~a~~g~gpa~~~~~~ea 209 (322)
T 2izz_A 138 RVIRCMT-NTPVVVREGATVYATGTHAQVEDGRLMEQLLSSVGFC-------TEVEEDLIDAVTGLSGSGPAYAFTALDA 209 (322)
T ss_dssp EEEEEEC-CGGGGGTCEEEEEEECTTCCHHHHHHHHHHHHTTEEE-------EECCGGGHHHHHHHTTTHHHHHHHHHHH
T ss_pred eEEEEeC-CcHHHHcCCeEEEEeCCCCCHHHHHHHHHHHHhCCCE-------EEeCHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 3444332 33333445558888888 89999999999999873 456654333344432 25556666667
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHhccchhhhhHHHHHHHHhcccCCCCCchhhHHHHHhhcccCchHHHHHHHHHcCC
Q 041006 83 ISEAYYLLKHVGGVSNAELAEIFDEWNKGELESFMVQITADIFKVKDEYGEGELVDKILDKTGMKGTGKWTIQQAAELLI 162 (333)
Q Consensus 83 ~AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~i~S~L~~i~~~il~~~d~~~~~~lvd~~~d~~~~k~~~~~~v~~A~~~Gv 162 (333)
++|+ +. ..|+|.++..++ ...+...+. ..+.... ..+..+.+.+. ...++....+....+.|+
T Consensus 210 la~a---~~-~~Gl~~~~a~~l---~~~~~~g~~------~~~~~~~-~~p~~l~~~v~---sp~g~t~~~l~~l~~~g~ 272 (322)
T 2izz_A 210 LADG---GV-KMGLPRRLAVRL---GAQALLGAA------KMLLHSE-QHPGQLKDNVS---SPGGATIHALHVLESGGF 272 (322)
T ss_dssp HHHH---HH-HTTCCHHHHHHH---HHHHHHHHH------HHHHHCS-SCHHHHHHHHC---CTTSHHHHHHHHHHHTTH
T ss_pred HHHH---HH-HcCCCHHHHHHH---HHHHHHHHH------HHHHhcC-CCHHHHHHhCC---CCCcHHHHHHHHHHHCCH
Confidence 7766 34 489999988887 444433321 1111110 01111222211 112233345667778899
Q ss_pred ChhHHHHH
Q 041006 163 AALTIAGS 170 (333)
Q Consensus 163 plP~~~aA 170 (333)
+.+++.+.
T Consensus 273 ~~~~~~av 280 (322)
T 2izz_A 273 RSLLINAV 280 (322)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98876543
No 68
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.82 E-value=0.022 Score=52.53 Aligned_cols=64 Identities=11% Similarity=0.190 Sum_probs=49.9
Q ss_pred eeccc--CCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHH
Q 041006 26 SLMPG--GSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYGDMQLISEAYYLLKHVGGVSNAELAE 103 (333)
Q Consensus 26 sim~G--G~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a~m~a~AEg~~Ll~~~~Gld~~~ia~ 103 (333)
.++.| +++++++.++++++.++.. ++++++. .| ++++|.+. ..+.|++.++++ .+++++++..
T Consensus 170 ~i~~g~~~~~e~~~~~~~l~~~~G~~------~v~~~~~-~g---~i~nr~l~----~~~~Ea~~l~~~-g~~~~~~id~ 234 (302)
T 1f0y_A 170 EVIKTPMTSQKTFESLVDFSKALGKH------PVSCKDT-PG---FIVNRLLV----PYLMEAIRLYER-GDASKEDIDT 234 (302)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHTTCE------EEEECSC-TT---TTHHHHHH----HHHHHHHHHHHT-TSSCHHHHHH
T ss_pred EEeCCCCCCHHHHHHHHHHHHHcCCc------eEEecCc-cc---ccHHHHHH----HHHHHHHHHHHc-CCCCHHHHHH
Confidence 34444 2899999999999999975 7888863 33 55666553 357999999996 7899999888
Q ss_pred H
Q 041006 104 I 104 (333)
Q Consensus 104 I 104 (333)
+
T Consensus 235 ~ 235 (302)
T 1f0y_A 235 A 235 (302)
T ss_dssp H
T ss_pred H
Confidence 8
No 69
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.72 E-value=0.024 Score=51.91 Aligned_cols=74 Identities=14% Similarity=0.198 Sum_probs=57.4
Q ss_pred HhcCC-eecccC---CHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 041006 21 ARHGP-SLMPGG---SFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYGDMQLISEAYYLLKHVGGV 96 (333)
Q Consensus 21 A~~G~-sim~GG---~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a~m~a~AEg~~Ll~~~~Gl 96 (333)
+..++ ..+++| ++++++.++++++.++++ ++++++.+.|. ++|+.+. ..+.|++.++++ .++
T Consensus 148 ~~~~~lvevv~~~~t~~~~~~~~~~l~~~~g~~------~v~v~~~~~g~---i~nr~~~----~~~~ea~~l~~~-g~~ 213 (283)
T 4e12_A 148 VWVNNTAEVMGTTKTDPEVYQQVVEFASAIGMV------PIELKKEKAGY---VLNSLLV----PLLDAAAELLVD-GIA 213 (283)
T ss_dssp TTTSCEEEEEECTTSCHHHHHHHHHHHHHTTCE------EEECSSCCTTT---THHHHHH----HHHHHHHHHHHT-TSC
T ss_pred cccCceEEEEeCCCCCHHHHHHHHHHHHHcCCE------EEEEecCCCCE---EehHHHH----HHHHHHHHHHHh-CCC
Confidence 45667 666666 799999999999999986 78897666665 3455543 357999999995 788
Q ss_pred CHHHHHHHHHHhccc
Q 041006 97 SNAELAEIFDEWNKG 111 (333)
Q Consensus 97 d~~~ia~I~~~w~~G 111 (333)
|+++|.++ |+.|
T Consensus 214 ~~~~id~~---~~~~ 225 (283)
T 4e12_A 214 DPETIDKT---WRIG 225 (283)
T ss_dssp CHHHHHHH---HHHH
T ss_pred CHHHHHHH---HHhc
Confidence 99999998 6544
No 70
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=95.55 E-value=0.03 Score=50.09 Aligned_cols=79 Identities=13% Similarity=0.108 Sum_probs=51.7
Q ss_pred ecccCCCHHHHhcCC-eecc--cCCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHHHHHHHHHHHH
Q 041006 11 SAWGSPGARKARHGP-SLMP--GGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYGDMQLISEAY 87 (333)
Q Consensus 11 dapVSGg~~gA~~G~-sim~--GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a~m~a~AEg~ 87 (333)
+.|+++++ |. .+++ +++++.++.++++|+.++. +.++++.-...++-+... .-+.+..++|++
T Consensus 121 ~~p~~~~~-----g~~~~~~~~~~~~~~~~~~~~l~~~~G~-------~~~~~e~~~d~~~a~~g~--gpa~~~~~~eal 186 (247)
T 3gt0_A 121 NTPALVGE-----GMSALCPNEMVTEKDLEDVLNIFNSFGQ-------TEIVSEKLMDVVTSVSGS--SPAYVYMIIEAM 186 (247)
T ss_dssp CGGGGGTC-----EEEEEEECTTCCHHHHHHHHHHHGGGEE-------EEECCGGGHHHHHHHHHH--HHHHHHHHHHHH
T ss_pred ChHHHHcC-----ceEEEEeCCCCCHHHHHHHHHHHHhCCC-------EEEeCHHHccHHHHHhcc--HHHHHHHHHHHH
Confidence 56666554 55 4555 4899999999999999997 677765332222222221 123444556666
Q ss_pred HH-HHHhCCCCHHHHHHH
Q 041006 88 YL-LKHVGGVSNAELAEI 104 (333)
Q Consensus 88 ~L-l~~~~Gld~~~ia~I 104 (333)
.. +. +.|+|+++..++
T Consensus 187 ~~a~~-~~Gl~~~~a~~~ 203 (247)
T 3gt0_A 187 ADAAV-LDGMPRNQAYKF 203 (247)
T ss_dssp HHHHH-HTTCCHHHHHHH
T ss_pred HHHHH-HcCCCHHHHHHH
Confidence 55 55 499999999888
No 71
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=94.86 E-value=0.035 Score=50.36 Aligned_cols=64 Identities=8% Similarity=0.037 Sum_probs=51.7
Q ss_pred EEe-cccCCC----HHHHh----cCC-eecc---cCCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHH
Q 041006 9 LIS-AWGSPG----ARKAR----HGP-SLMP---GGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGI 75 (333)
Q Consensus 9 ~ld-apVSGg----~~gA~----~G~-sim~---GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l 75 (333)
+++ .|+.|+ +..|. .|. ++++ ++++++++.++++|+.++.+ ++++++...+..+|++.|+.
T Consensus 114 ~v~~~p~~~~~~~gp~~a~~~l~~g~~~~~~~~~~~~~~~~~~v~~l~~~~g~~------~~~~~~~~~d~~~~~~~~~~ 187 (281)
T 2g5c_A 114 FVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGV------VEYMSPELHDYVFGVVSHLP 187 (281)
T ss_dssp EECEEEECCCSCCSGGGCCSSTTTTCEEEECCCSSSCHHHHHHHHHHHHHTTCE------EEECCHHHHHHHHHHHTHHH
T ss_pred ceeeccccCCccCChhhhhhHHhCCCCEEEecCCCCCHHHHHHHHHHHHHcCCE------EEEcCHHHHHHHHHHHHHHH
Confidence 666 687774 45554 687 7777 89999999999999999985 88999877788999998887
Q ss_pred HHH
Q 041006 76 EYG 78 (333)
Q Consensus 76 ~~a 78 (333)
.+.
T Consensus 188 ~~~ 190 (281)
T 2g5c_A 188 HAV 190 (281)
T ss_dssp HHH
T ss_pred HHH
Confidence 553
No 72
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.84 E-value=0.0034 Score=55.18 Aligned_cols=64 Identities=11% Similarity=0.051 Sum_probs=47.4
Q ss_pred CccEEe------cccCCCHHHHhcCC-eecccCC-HHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHH
Q 041006 6 RVCLIS------AWGSPGARKARHGP-SLMPGGS-FEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGI 75 (333)
Q Consensus 6 G~~~ld------apVSGg~~gA~~G~-sim~GG~-~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l 75 (333)
+.++++ +|..+.+..+..++ .++++|+ +++++.++++|+.++.+ +.++|+.+.+..+|++.|.+
T Consensus 119 ~~~vv~~~~~~~~p~~~~~~~~g~~~~~~~~~g~~~~~~~~v~~ll~~~G~~------~~~~~~i~~a~~~K~i~~l~ 190 (209)
T 2raf_A 119 DSQVLKAFNTTFAATLQSGQVNGKEPTTVLVAGNDDSAKQRFTRALADSPLE------VKDAGKLKRARELEAMGFMQ 190 (209)
T ss_dssp TSEEEECSTTSCHHHHHHSEETTTEECEEEEEESCHHHHHHHHHHTTTSSCE------EEEEESGGGHHHHHHHHHHH
T ss_pred CCcEEEeeecccHhhccccccCCCCCceeEEcCCCHHHHHHHHHHHHHcCCc------eEeCCCHhHHHHhcchHHHH
Confidence 456777 44444332221135 6677776 58999999999999976 89999999999999998877
No 73
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=94.75 E-value=0.058 Score=56.27 Aligned_cols=77 Identities=12% Similarity=0.146 Sum_probs=57.6
Q ss_pred CCccEEecccCCCHHHHhcCC-e-ecccC--CHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHHHHH
Q 041006 5 RRVCLISAWGSPGARKARHGP-S-LMPGG--SFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYGDM 80 (333)
Q Consensus 5 ~G~~~ldapVSGg~~gA~~G~-s-im~GG--~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a~m 80 (333)
.|.+|++ ||.+ ++ . |++|. ++++++.++++++.+++. ++++|+. .|. ++|+.+ ..
T Consensus 446 iG~hf~~-P~~~-------~~lvevv~g~~t~~e~~~~~~~l~~~lGk~------~v~v~d~-~Gf---i~Nril-~~-- 504 (725)
T 2wtb_A 446 VGAHFFS-PAHI-------MPLLEIVRTNHTSAQVIVDLLDVGKKIKKT------PVVVGNC-TGF---AVNRMF-FP-- 504 (725)
T ss_dssp EEEEECS-STTT-------CCEEEEEECSSCCHHHHHHHHHHHHHTTCE------EEEEESS-TTT---THHHHH-HH--
T ss_pred EEecCCC-Cccc-------CceEEEEECCCCCHHHHHHHHHHHHHhCCE------EEEECCC-ccH---HHHHHH-HH--
Confidence 4777777 7654 45 4 45543 899999999999999986 8899974 443 344444 43
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHH
Q 041006 81 QLISEAYYLLKHVGGVSNAELAEIF 105 (333)
Q Consensus 81 ~a~AEg~~Ll~~~~Gld~~~ia~I~ 105 (333)
.+.|++.|+++ |+|+++|.+++
T Consensus 505 -~~~Ea~~l~~~--G~~~e~id~~~ 526 (725)
T 2wtb_A 505 -YTQAAMFLVEC--GADPYLIDRAI 526 (725)
T ss_dssp -HHHHHHHHHHT--TCCHHHHHHHH
T ss_pred -HHHHHHHHHHC--CCCHHHHHHHH
Confidence 57999999984 89999999994
No 74
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=94.36 E-value=0.071 Score=55.52 Aligned_cols=77 Identities=12% Similarity=0.131 Sum_probs=57.4
Q ss_pred CCccEEecccCCCHHHHhcCC--eecccC--CHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHHHHH
Q 041006 5 RRVCLISAWGSPGARKARHGP--SLMPGG--SFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYGDM 80 (333)
Q Consensus 5 ~G~~~ldapVSGg~~gA~~G~--sim~GG--~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a~m 80 (333)
.|.+|++ ||.. ++ .+++|. ++++++.++++++.+++. ++++|+. .|. ++|+.+ .
T Consensus 448 ig~hf~~-P~~~-------~~lvevv~g~~t~~e~~~~~~~l~~~lGk~------~v~v~d~-~Gf---i~Nril-~--- 505 (715)
T 1wdk_A 448 VGMHFFN-PVHM-------MPLVEVIRGEKSSDLAVATTVAYAKKMGKN------PIVVNDC-PGF---LVNRVL-F--- 505 (715)
T ss_dssp EEEECCS-STTT-------CCEEEEEECSSCCHHHHHHHHHHHHHTTCE------EEEEESC-TTT---THHHHH-H---
T ss_pred EEEEccC-Cccc-------CceEEEEECCCCCHHHHHHHHHHHHHhCCE------eEEEcCC-CCh---hhhHHH-H---
Confidence 4667766 6653 45 355554 899999999999999986 8899974 443 345544 3
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHH
Q 041006 81 QLISEAYYLLKHVGGVSNAELAEIF 105 (333)
Q Consensus 81 ~a~AEg~~Ll~~~~Gld~~~ia~I~ 105 (333)
..+.|++.|+++ |+|+++|.+++
T Consensus 506 ~~~~Ea~~l~~~--G~~~~~id~~~ 528 (715)
T 1wdk_A 506 PYFGGFAKLVSA--GVDFVRIDKVM 528 (715)
T ss_dssp HHHHHHHHHHHT--TCCHHHHHHHH
T ss_pred HHHHHHHHHHHC--CCCHHHHHHHH
Confidence 357899999984 89999999994
No 75
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=94.11 E-value=0.12 Score=50.80 Aligned_cols=78 Identities=12% Similarity=0.193 Sum_probs=57.4
Q ss_pred CCccEEecccCCCHHHHhcCC--eeccc--CCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHHHHH
Q 041006 5 RRVCLISAWGSPGARKARHGP--SLMPG--GSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYGDM 80 (333)
Q Consensus 5 ~G~~~ldapVSGg~~gA~~G~--sim~G--G~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a~m 80 (333)
.|.+|+ +|+.. ++ .+++| +++++++.++++++.+++. ++++|+ ..|. +.|-+....
T Consensus 169 ig~hf~-~P~~~-------~~lvevv~g~~t~~e~~~~~~~l~~~lGk~------~v~v~~-~~gf----i~Nrll~~~- 228 (463)
T 1zcj_A 169 IGTHFF-SPAHV-------MRLLEVIPSRYSSPTTIATVMSLSKKIGKI------GVVVGN-CYGF----VGNRMLAPY- 228 (463)
T ss_dssp EEEEEC-SSTTT-------CCEEEEEECSSCCHHHHHHHHHHHHHTTCE------EEEBCC-STTT----THHHHHHHH-
T ss_pred EEeecC-CCccc-------ceeEEEeCCCCCCHHHHHHHHHHHHHhCCE------EEEECC-CccH----HHHHHHHHH-
Confidence 367777 67653 34 45554 7999999999999999986 889996 3443 344444443
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHH
Q 041006 81 QLISEAYYLLKHVGGVSNAELAEIFD 106 (333)
Q Consensus 81 ~a~AEg~~Ll~~~~Gld~~~ia~I~~ 106 (333)
+.|++.++++ |++++++.+++.
T Consensus 229 --~~ea~~l~~~--G~~~~~id~~~~ 250 (463)
T 1zcj_A 229 --YNQGFFLLEE--GSKPEDVDGVLE 250 (463)
T ss_dssp --HHHHHHHHHT--TCCHHHHHHHHH
T ss_pred --HHHHHHHHHc--CCCHHHHHHHHH
Confidence 4999999884 799999999954
No 76
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=93.85 E-value=0.14 Score=50.45 Aligned_cols=136 Identities=15% Similarity=0.078 Sum_probs=87.2
Q ss_pred EecccCCCHHHHhcCC---------eeccc-CCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHHHH
Q 041006 10 ISAWGSPGARKARHGP---------SLMPG-GSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYGD 79 (333)
Q Consensus 10 ldapVSGg~~gA~~G~---------sim~G-G~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a~ 79 (333)
+|-.|.-+|+-.+.|. -+++| +++.+.+.++.+.+.+... +..++. -.+..+|++.|++....
T Consensus 166 ~~f~v~~~PErl~eG~a~~d~~~~~riViG~~~~~a~~~~~~ly~~~~~~------~~~~~~-~~AE~~Kl~eN~~ravn 238 (444)
T 3vtf_A 166 VKFSVASNPEFLREGSALEDFFKPDRIVIGAGDERAASFLLDVYKAVDAP------KLVMKP-REAELVKYASNVFLALK 238 (444)
T ss_dssp CCCEEEECCCCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHTTTSCSC------EEEECH-HHHHHHHHHHHHHHHHH
T ss_pred CCceeecCcccccCCccccccccCCcEEEcCCCHHHHHHHHHHHhccCCC------EEEech-hHHHHHHHHHHHHHHHH
Confidence 3555666666666664 24445 4777888888888776542 445544 57889999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHhccchhhhhHHHHHHHHhcccCCCCCchhhHHHHHhhcccCchHHHHHHHHH
Q 041006 80 MQLISEAYYLLKHVGGVSNAELAEIFDEWNKGELESFMVQITADIFKVKDEYGEGELVDKILDKTGMKGTGKWTIQQAAE 159 (333)
Q Consensus 80 m~a~AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~i~S~L~~i~~~il~~~d~~~~~~lvd~~~d~~~~k~~~~~~v~~A~~ 159 (333)
++.+-|-..++++ .|+|..++.+.... ...+.. ..+.... .-++.-+- +|....+..|.+
T Consensus 239 Ia~~NEla~ice~-~GiDv~eV~~a~~~--d~rig~-------~~l~PG~-G~GG~Cip---------kD~~~L~~~a~~ 298 (444)
T 3vtf_A 239 ISFANEVGLLAKR-LGVDTYRVFEAVGL--DKRIGR-------HYFGAGL-GFGGSCFP---------KDTLAFIRFGES 298 (444)
T ss_dssp HHHHHHHHHHHHH-TTCCHHHHHHHHHT--STTSCS-------TTCCCSS-CCCTTTHH---------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-cCCCHHHHHHHhcc--CCCCCC-------CCCCCCC-CCCCcccC---------cCHHHHHHHHHh
Confidence 9999999999995 99999988777321 001110 1112111 01121111 123345567889
Q ss_pred cCCChhHHHHHHH
Q 041006 160 LLIAALTIAGSLD 172 (333)
Q Consensus 160 ~GvplP~~~aAl~ 172 (333)
.|++.+++.++..
T Consensus 299 ~g~~~~li~a~~~ 311 (444)
T 3vtf_A 299 LGLEMAISKAVLR 311 (444)
T ss_dssp TTCCCHHHHHHHH
T ss_pred cCCCHHHHHhhHH
Confidence 9999998766543
No 77
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=93.19 E-value=0.17 Score=47.90 Aligned_cols=65 Identities=9% Similarity=-0.068 Sum_probs=49.8
Q ss_pred CccEEe-cccCCCH-HHHhc-------CC-eecccC---CHH--------HHHHHHHHHHHHhccCCCCCceEEeCCCCh
Q 041006 6 RVCLIS-AWGSPGA-RKARH-------GP-SLMPGG---SFE--------AYNNIQGILQKVAAQVDDGPCVTYIGEGGS 64 (333)
Q Consensus 6 G~~~ld-apVSGg~-~gA~~-------G~-sim~GG---~~~--------a~~~v~pvL~~i~~~~~~~p~v~~~G~~Ga 64 (333)
+++||+ .|++|++ .|+.+ |. ++++.+ +++ ++++++++|+.+|++ ++++++...
T Consensus 117 ~~~~v~~HPmaG~e~sG~~aa~~~Lf~g~~~iltp~~~~~~e~~~~~~~~~~~~v~~l~~~~Ga~------v~~~~~~~H 190 (341)
T 3ktd_A 117 QHRYVGSHPMAGTANSGWSASMDGLFKRAVWVVTFDQLFDGTDINSTWISIWKDVVQMALAVGAE------VVPSRVGPH 190 (341)
T ss_dssp GGGEECEEECCSCC-CCGGGCCSSTTTTCEEEECCGGGTSSCCCCHHHHHHHHHHHHHHHHTTCE------EEECCHHHH
T ss_pred CCcEecCCccccccccchhhhhhHHhcCCeEEEEeCCCCChhhhccchHHHHHHHHHHHHHcCCE------EEEeCHHHH
Confidence 578999 8999986 55543 43 667655 566 899999999999987 899998777
Q ss_pred hhHHHHHHHHHH
Q 041006 65 SNFVKMVHNGIE 76 (333)
Q Consensus 65 G~~vKlv~N~l~ 76 (333)
...+.++..+-.
T Consensus 191 D~~~A~vshlPh 202 (341)
T 3ktd_A 191 DAAAARVSHLTH 202 (341)
T ss_dssp HHHHHHHTHHHH
T ss_pred HHHHHHHhHHHH
Confidence 777777665543
No 78
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=92.83 E-value=0.12 Score=46.63 Aligned_cols=86 Identities=8% Similarity=-0.026 Sum_probs=59.5
Q ss_pred cEEec-ccCCCH----HHHh----cCC-eecc---cCCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHH
Q 041006 8 CLISA-WGSPGA----RKAR----HGP-SLMP---GGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNG 74 (333)
Q Consensus 8 ~~lda-pVSGg~----~gA~----~G~-sim~---GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~ 74 (333)
++++. |++|++ ..|. .|. ++++ +++++.++.++++|+.++.+ ++++++......+|++.|+
T Consensus 107 ~~~~~~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~~~~~~~~~~v~~l~~~~g~~------~~~~~~~~~~~~~~~~~~~ 180 (279)
T 2f1k_A 107 GFIGGHPMAGTAAQGIDGAEENLFVNAPYVLTPTEYTDPEQLACLRSVLEPLGVK------IYLCTPADHDQAVAWISHL 180 (279)
T ss_dssp TCEEEEECCCCSCSSGGGCCTTTTTTCEEEEEECTTCCHHHHHHHHHHHGGGTCE------EEECCHHHHHHHHHHHTHH
T ss_pred CEeecCcccCCccCCHHHHhHHHhCCCcEEEecCCCCCHHHHHHHHHHHHHcCCE------EEEcCHHHHHHHHHHHhhH
Confidence 57777 888743 3333 454 5544 46899999999999999976 8899987788899999997
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCC--HHHHHHH
Q 041006 75 IEYGDMQLISEAYYLLKHVGGVS--NAELAEI 104 (333)
Q Consensus 75 l~~a~m~a~AEg~~Ll~~~~Gld--~~~ia~I 104 (333)
..+... +++++. . ..|++ .+....+
T Consensus 181 p~~i~~-al~~~~---~-~~~~~~~~~~~~~l 207 (279)
T 2f1k_A 181 PVMVSA-ALIQAC---A-GEKDGDILKLAQNL 207 (279)
T ss_dssp HHHHHH-HHHHHH---H-TCSCHHHHHHHHHH
T ss_pred HHHHHH-HHHHHH---H-hcccccchhHHHhh
Confidence 544433 556653 2 25665 3444443
No 79
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.82 E-value=0.14 Score=47.85 Aligned_cols=63 Identities=10% Similarity=0.096 Sum_probs=50.6
Q ss_pred cEEe-cccCC----CHHHHh----cCC-eecc---cCCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHH
Q 041006 8 CLIS-AWGSP----GARKAR----HGP-SLMP---GGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNG 74 (333)
Q Consensus 8 ~~ld-apVSG----g~~gA~----~G~-sim~---GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~ 74 (333)
+|++ .|+.| |+..|. .|. .+++ ++++++++.++++|+.++++ ++++++......+..+..+
T Consensus 145 ~~v~~hPm~G~e~sG~~~A~~~Lf~g~~~il~~~~~~~~~~~~~v~~l~~~~G~~------v~~~~~~~hD~~~a~~s~l 218 (314)
T 3ggo_A 145 RFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGV------VEYMSPELHDYVFGVVSHL 218 (314)
T ss_dssp GEECEEECCCCCCCSGGGCCTTTTTTCEEEECCCTTSCHHHHHHHHHHHHHTTCE------EEECCHHHHHHHHHHHTHH
T ss_pred CEEecCcccCCcccchhhhhhhhhcCCEEEEEeCCCCCHHHHHHHHHHHHHcCCE------EEEcCHHHHHHHHHHHHHH
Confidence 7887 79999 455565 576 6666 57899999999999999987 8999998888888887654
Q ss_pred HH
Q 041006 75 IE 76 (333)
Q Consensus 75 l~ 76 (333)
-.
T Consensus 219 ph 220 (314)
T 3ggo_A 219 PH 220 (314)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 80
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=91.79 E-value=0.011 Score=55.38 Aligned_cols=89 Identities=8% Similarity=-0.066 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHhccchhhhh--HHHH--HHHHhcc--cCCCCCchhhHHHHHhhcccC
Q 041006 75 IEYGDMQLISEAYYLLKHVGGVSNAELAEIFDEWNKGELESF--MVQI--TADIFKV--KDEYGEGELVDKILDKTGMKG 148 (333)
Q Consensus 75 l~~a~m~a~AEg~~Ll~~~~Gld~~~ia~I~~~w~~G~i~S~--L~~i--~~~il~~--~d~~~~~~lvd~~~d~~~~k~ 148 (333)
.......+++|++.++++ .|++++.+.+. +..+...+. +.+. ...++.. ++.......+.+.+. .
T Consensus 230 ~~~~~~~~~~E~~~va~a-~G~~~~~~~~~---~~~~~~~~~~~l~~~~~~~sm~~d~~~~~e~~~~~~~~D~~-----~ 300 (359)
T 1bg6_A 230 VGSLAEKVDAERIAIAKA-FDLNVPSVCEW---YKESYGQSPATIYEAVQGNPAYRGIAGPINLNTRYFFEDVS-----T 300 (359)
T ss_dssp HHHHHHHHHHHHHHHHHT-TTCCCCCHHHH---C-------CCSHHHHHHTCGGGTTCBCCSSSCCHHHHHHHH-----T
T ss_pred HHHHHHHHHHHHHHHHHH-hCCCCCcHHHH---HHHHhCCCcccHHHHHhcchhhcCCCCCCCCCccceecCcC-----c
Confidence 345677889999999995 99988766665 332221110 0111 1111111 110001001111000 0
Q ss_pred chHHHHHHHHHcCCChhHHHHHHH
Q 041006 149 TGKWTIQQAAELLIAALTIAGSLD 172 (333)
Q Consensus 149 ~~~~~v~~A~~~GvplP~~~aAl~ 172 (333)
-...++..|.++|+|+|+....+.
T Consensus 301 ~~g~~~~~a~~~gv~~P~~~~l~~ 324 (359)
T 1bg6_A 301 GLVPLSELGRAVNVPTPLIDAVLD 324 (359)
T ss_dssp THHHHHHHHHHTTCCCHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCchHHHHHHH
Confidence 025688999999999998876544
No 81
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=91.49 E-value=0.21 Score=45.28 Aligned_cols=50 Identities=16% Similarity=0.087 Sum_probs=37.3
Q ss_pred CccEEe-cccCC----CHHHHh----cCC-eec---ccCCHHHHHHHHHHHHHHhccCCCCCceEEeCC
Q 041006 6 RVCLIS-AWGSP----GARKAR----HGP-SLM---PGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGE 61 (333)
Q Consensus 6 G~~~ld-apVSG----g~~gA~----~G~-sim---~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~ 61 (333)
+++|++ .|++| |+..|. .|. +++ .++++++++.++++|+.++.+ ++++++
T Consensus 119 ~~~~v~~~P~~g~~~~g~~~a~~~l~~g~~~~~~~~~~~~~~~~~~v~~l~~~~G~~------~~~~~~ 181 (290)
T 3b1f_A 119 PVQFVGSHPMAGSHKSGAVAANVNLFENAYYIFSPSCLTKPNTIPALQDLLSGLHAR------YVEIDA 181 (290)
T ss_dssp SCEEEEEEEC-----CCTTSCCTTTTTTSEEEEEECTTCCTTHHHHHHHHTGGGCCE------EEECCH
T ss_pred CCEEEEeCCcCCCCcchHHHhhHHHhCCCeEEEecCCCCCHHHHHHHHHHHHHcCCE------EEEcCH
Confidence 788988 68887 565555 676 433 478999999999999999985 677775
No 82
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=90.61 E-value=0.0029 Score=56.51 Aligned_cols=67 Identities=9% Similarity=-0.153 Sum_probs=51.3
Q ss_pred cCCcc-EEecccCCCHHHHhcCCeecccCCHHHHHHHHHHHHHHhccCCCCCceEEeCCCC-hhhHHHHHHHHHHHHH
Q 041006 4 VRRVC-LISAWGSPGARKARHGPSLMPGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGG-SSNFVKMVHNGIEYGD 79 (333)
Q Consensus 4 ~~G~~-~ldapVSGg~~gA~~G~sim~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~G-aG~~vKlv~N~l~~a~ 79 (333)
++|+. ++++|++||...++.|.. |++...++..+|+++.++. +++|.|+.+ +++.+|+..|.+....
T Consensus 100 ~~g~~~~i~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~------~~~~~G~~~~~~~~~~~~~n~~~~~~ 168 (236)
T 2dc1_A 100 KTGRRVYIASGAIGGLDAIFSASE---LIEEIVLTTRKNWRQFGRK------GVIFEGSASEAAQKFPKNLNVAATLS 168 (236)
T ss_dssp HHCCCEEECCTTCSCHHHHHHTGG---GEEEEEEEEEEEGGGTTSC------EEEEEEEHHHHHHHSTTCCHHHHHHH
T ss_pred hcCCeEEecCccccChHHHHHhhc---cccEEEEEEEcChHHcCcc------eEEEeccHHHHHHHCCchHHHHHHHH
Confidence 45776 799999999999988774 8888888888898776655 489999854 3356777777775443
No 83
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=86.07 E-value=4.8 Score=36.92 Aligned_cols=61 Identities=13% Similarity=0.087 Sum_probs=39.3
Q ss_pred cCCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHH--------------------HHHHHHHHHHHH
Q 041006 30 GGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEY--------------------GDMQLISEAYYL 89 (333)
Q Consensus 30 GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~--------------------a~m~a~AEg~~L 89 (333)
+.+.+..+.+..+|..-+-+ +.+.-+.-....-|++.|+... -...++.|...+
T Consensus 155 ~~~~~~~~~l~~~l~~~~~~------~~~~~di~~~~w~Kl~~N~~~N~ltal~~~~~g~~~~~~~~~l~~~~~~E~~~v 228 (320)
T 3i83_A 155 GGVSERVKTLAAAFEEAGID------GIATENITTARWQKCVWNAAFNPLSVLSGGLDTLDILSTQEGFVRAIMQEIRAV 228 (320)
T ss_dssp SCCCHHHHHHHHHHHHTTSC------EEECSCHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHhCCCC------ceECHHHHHHHHHHHHHHHhhhHHHHHHCCCHHHHHhCcHHHHHHHHHHHHHHH
Confidence 45667788888888876643 5555555566788888875321 123566777777
Q ss_pred HHHhCCCC
Q 041006 90 LKHVGGVS 97 (333)
Q Consensus 90 l~~~~Gld 97 (333)
+++ .|++
T Consensus 229 a~a-~G~~ 235 (320)
T 3i83_A 229 AAA-NGHP 235 (320)
T ss_dssp HHH-TTCC
T ss_pred HHH-cCCC
Confidence 774 5654
No 84
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=84.79 E-value=4.2 Score=37.35 Aligned_cols=120 Identities=13% Similarity=0.049 Sum_probs=64.1
Q ss_pred ecccCCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHHH---------------------HHHHHHH
Q 041006 27 LMPGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYG---------------------DMQLISE 85 (333)
Q Consensus 27 im~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a---------------------~m~a~AE 85 (333)
+.+|. .+..+.+..+|..-+-+ +.+.-+.-.....|++-|+...+ ...++.|
T Consensus 162 ~~ig~-~~~~~~l~~~l~~~~~~------~~~~~Di~~~~w~Kl~~N~~~n~l~al~~~~~g~l~~~~~~~~l~~~~~~E 234 (318)
T 3hwr_A 162 LVIEP-TSHGANLAAIFAAAGVP------VETSDNVRGALWAKLILNCAYNALSAITQLPYGRLVRGEGVEAVMRDVMEE 234 (318)
T ss_dssp EEECC-CTTTHHHHHHHHHTTCC------EEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSTTHHHHHHHHHHH
T ss_pred EEEcC-CHHHHHHHHHHHhCCCC------cEechHHHHHHHHHHHHHhhhhHHHHHHCCCHHHHhcChhHHHHHHHHHHH
Confidence 34454 45567788888775543 44444445567889988874322 3356677
Q ss_pred HHHHHHHhCCCCH--HHHHHHHHHhccc-hhh-hhHHHHHHHHhcccCCCCCchhhHHHHHhhcccCchHHHHHHHHHcC
Q 041006 86 AYYLLKHVGGVSN--AELAEIFDEWNKG-ELE-SFMVQITADIFKVKDEYGEGELVDKILDKTGMKGTGKWTIQQAAELL 161 (333)
Q Consensus 86 g~~Ll~~~~Gld~--~~ia~I~~~w~~G-~i~-S~L~~i~~~il~~~d~~~~~~lvd~~~d~~~~k~~~~~~v~~A~~~G 161 (333)
...++++ .|+++ +.+..+++....- ... |.+.++. +.++.+ +|. ....++..|.++|
T Consensus 235 ~~~va~a-~G~~l~~~~~~~~~~~~~~~~~~~sSM~qD~~----~gr~tE-----id~---------i~G~vv~~a~~~g 295 (318)
T 3hwr_A 235 CFAVARA-EGVKLPDDVALAIRRIAETMPRQSSSTAQDLA----RGKRSE-----IDH---------LNGLIVRRGDALG 295 (318)
T ss_dssp HHHHHHH-TTCCCCTTHHHHHHHHHHHSTTCCCHHHHHHH----TTCCCS-----GGG---------THHHHHHHHHHTT
T ss_pred HHHHHHH-cCCCCChHHHHHHHHHHHhcCCCCcHHHHHHH----cCChhH-----HHH---------HHHHHHHHHHHhC
Confidence 7777775 55543 2222221111111 111 3333332 222210 111 1346888999999
Q ss_pred CChhHHHHHHH
Q 041006 162 IAALTIAGSLD 172 (333)
Q Consensus 162 vplP~~~aAl~ 172 (333)
+|+|.......
T Consensus 296 v~tP~~~~l~~ 306 (318)
T 3hwr_A 296 IPVPANRVLHA 306 (318)
T ss_dssp CCCHHHHHHHH
T ss_pred CCCcHHHHHHH
Confidence 99998765443
No 85
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=84.77 E-value=0.14 Score=44.89 Aligned_cols=53 Identities=11% Similarity=0.156 Sum_probs=38.2
Q ss_pred EEecccCC-CHHHHhcCC--eecccCCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHH
Q 041006 9 LISAWGSP-GARKARHGP--SLMPGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFV 68 (333)
Q Consensus 9 ~ldapVSG-g~~gA~~G~--sim~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~v 68 (333)
++.+++.. |+. +..++ .++.|.++++.+.++++|+.++.+ ++++|+.+.+..+
T Consensus 150 ~~~~~v~~~g~~-~~~~~~~v~~~g~~~~~~~~v~~l~~~~G~~------~~~~G~l~~a~~~ 205 (220)
T 4huj_A 150 TLPAAVLAADPD-KGTGSRVLFLSGNHSDANRQVAELISSLGFA------PVDLGTLAASGPI 205 (220)
T ss_dssp SSCHHHHTSCSB-CSSCEEEEEEEESCHHHHHHHHHHHHHTTCE------EEECCSHHHHHHH
T ss_pred CCCHHHhhhCcc-cCCCCeeEEEeCCCHHHHHHHHHHHHHhCCC------eEeeCChhhcchh
Confidence 34555554 333 33344 456677899999999999999986 8999998777554
No 86
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=84.72 E-value=0.6 Score=42.81 Aligned_cols=88 Identities=8% Similarity=-0.059 Sum_probs=62.4
Q ss_pred CccEEec-ccCCCHHHHhcCC-eecc-cCCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHHHHHHH
Q 041006 6 RVCLISA-WGSPGARKARHGP-SLMP-GGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYGDMQL 82 (333)
Q Consensus 6 G~~~lda-pVSGg~~gA~~G~-sim~-GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a~m~a 82 (333)
+.+|+.. |++|.+.....|. ++++ +.++++++.++++|+.++.+ ++++++......++++.++-.+.. .+
T Consensus 114 ~~~~v~~hP~~g~~~~~~~g~~~~l~~~~~~~~~~~v~~l~~~~G~~------~~~~~~~~~d~~~a~~~~~p~~~a-~~ 186 (298)
T 2pv7_A 114 TGAVLGLHPMFGADIASMAKQVVVRCDGRFPERYEWLLEQIQIWGAK------IYQTNATEHDHNMTYIQALRHFST-FA 186 (298)
T ss_dssp SSEEEEEEECSCTTCSCCTTCEEEEEEEECGGGTHHHHHHHHHTTCE------EEECCHHHHHHHHHHHTHHHHHHH-HH
T ss_pred CCCEEeeCCCCCCCchhhcCCeEEEecCCCHHHHHHHHHHHHHcCCE------EEECCHHHHHHHHHHHHHHHHHHH-HH
Confidence 3567775 9999877666786 6555 44789999999999999986 788887766778888877654432 23
Q ss_pred HHHHHHHHHHhCCCCHHHHHHH
Q 041006 83 ISEAYYLLKHVGGVSNAELAEI 104 (333)
Q Consensus 83 ~AEg~~Ll~~~~Gld~~~ia~I 104 (333)
+.+++. ..|++.++..++
T Consensus 187 l~~~l~----~~g~~~~~~~~l 204 (298)
T 2pv7_A 187 NGLHLS----KQPINLANLLAL 204 (298)
T ss_dssp HHHHHT----TSSCCHHHHHHT
T ss_pred HHHHHH----hcCCCHHHHHhh
Confidence 444432 268887765553
No 87
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=80.79 E-value=13 Score=33.85 Aligned_cols=115 Identities=10% Similarity=0.015 Sum_probs=59.8
Q ss_pred CCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHHH---------------------HHHHHHHHHHH
Q 041006 31 GSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYG---------------------DMQLISEAYYL 89 (333)
Q Consensus 31 G~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a---------------------~m~a~AEg~~L 89 (333)
.+.+..+.+..+|..-+-+ +.+.-+.-.-..-|++-|....+ ...++.|...+
T Consensus 154 ~~~~~~~~l~~~l~~~g~~------~~~~~di~~~~w~Kl~~N~~~n~l~al~~~~~G~l~~~~~~~~l~~~~~~E~~~v 227 (312)
T 3hn2_A 154 RDTGRIEELAAMFRQAGVD------CRTTDDLKRARWEKLVWNIPFNGLCALLQQPVNLILARDVSRKLVRGIMLEVIAG 227 (312)
T ss_dssp CCSHHHHHHHHHHHHTTCC------EEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSHHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHhCCCC------cEEChHHHHHHHHHHHHHHhHHHHHHHHCCCHHHHHhChhHHHHHHHHHHHHHHH
Confidence 4567778888888876543 44433444456778887775322 23455677777
Q ss_pred HHHhCC--CCH--HHHHHHHHHhccch-hh-hhHHHHHHHHhcccCCCCCchhhHHHHHhhcccCchHHHHHHHHHcCCC
Q 041006 90 LKHVGG--VSN--AELAEIFDEWNKGE-LE-SFMVQITADIFKVKDEYGEGELVDKILDKTGMKGTGKWTIQQAAELLIA 163 (333)
Q Consensus 90 l~~~~G--ld~--~~ia~I~~~w~~G~-i~-S~L~~i~~~il~~~d~~~~~~lvd~~~d~~~~k~~~~~~v~~A~~~Gvp 163 (333)
+++ .| +++ +.+..+++..+... .. |.+.++. ..++. . +|. ....++..|.++|||
T Consensus 228 a~a-~G~~~~~~~~~~~~~~~~~~~~~~~~sSM~qD~~----~gr~t--E---id~---------i~G~vv~~a~~~gv~ 288 (312)
T 3hn2_A 228 ANA-QGLATFIADGYVDDMLEFTDAMGEYKPSMEIDRE----EGRPL--E---IAA---------IFRTPLAYGAREGIA 288 (312)
T ss_dssp HHT-SCCSSCCCTTHHHHHHHHHTTSCSCCCHHHHHHH----TTCCC--C---HHH---------HTHHHHHHHHHTTCC
T ss_pred HHH-cCCccCCCHHHHHHHHHHHhcCCCCCchHHHHHH----hCCCc--c---HHH---------HhhHHHHHHHHhCCC
Confidence 764 66 432 22222211121110 01 3332221 22211 0 111 134588999999999
Q ss_pred hhHHHHH
Q 041006 164 ALTIAGS 170 (333)
Q Consensus 164 lP~~~aA 170 (333)
+|.....
T Consensus 289 ~P~~~~l 295 (312)
T 3hn2_A 289 MPRVEML 295 (312)
T ss_dssp CHHHHHH
T ss_pred CCHHHHH
Confidence 9987553
No 88
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=80.59 E-value=13 Score=33.42 Aligned_cols=71 Identities=13% Similarity=0.152 Sum_probs=47.3
Q ss_pred cCCeeccc---CCHHHHHHHHHHHHHHhccCCCCCceEEeCCC-ChhhHHHH--HHHHHHHHHHHHHHHHHHHHHHhCCC
Q 041006 23 HGPSLMPG---GSFEAYNNIQGILQKVAAQVDDGPCVTYIGEG-GSSNFVKM--VHNGIEYGDMQLISEAYYLLKHVGGV 96 (333)
Q Consensus 23 ~G~sim~G---G~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~-GaG~~vKl--v~N~l~~a~m~a~AEg~~Ll~~~~Gl 96 (333)
.|-+.++. .+++.++.++++|+.+|. +.++.+. --..++-+ .-.++.+..+.+++|+ +.+ .|+
T Consensus 129 ~g~~~l~~~~~~~~~~~~~v~~l~~~iG~-------~~~v~~E~~~d~~talsgsgpa~~~~~~eal~~a---~v~-~Gl 197 (280)
T 3tri_A 129 AGATGLFANETVDKDQKNLAESIMRAVGL-------VIWVSSEDQIEKIAALSGSGPAYIFLIMEALQEA---AEQ-LGL 197 (280)
T ss_dssp CEEEEEECCTTSCHHHHHHHHHHHGGGEE-------EEECSSHHHHHHHHHHTTSHHHHHHHHHHHHHHH---HHH-TTC
T ss_pred CccEEEEeCCCCCHHHHHHHHHHHHHCCC-------eEEECCHHHhhHHHHHhccHHHHHHHHHHHHHHH---HHH-cCC
Confidence 34444443 358999999999999997 5677542 11112111 2245777888888887 343 899
Q ss_pred CHHHHHHH
Q 041006 97 SNAELAEI 104 (333)
Q Consensus 97 d~~~ia~I 104 (333)
+.++..++
T Consensus 198 ~~~~a~~l 205 (280)
T 3tri_A 198 TKETAELL 205 (280)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 99998887
No 89
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=78.28 E-value=6 Score=36.50 Aligned_cols=61 Identities=13% Similarity=0.053 Sum_probs=37.5
Q ss_pred CCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHH---------------------HHHHHHHHHHHHHH
Q 041006 31 GSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGI---------------------EYGDMQLISEAYYL 89 (333)
Q Consensus 31 G~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l---------------------~~a~m~a~AEg~~L 89 (333)
.+.+..+.+..+|+.-+-+ +.+.-+.-.....|++-|+. ..-...++.|...+
T Consensus 174 ~~~~~~~~l~~~l~~~g~~------~~~~~di~~~~w~Kl~~na~~N~l~al~~~~~g~~~~~~~~~~l~~~~~~E~~~v 247 (335)
T 3ghy_A 174 GASPRLASIAALFGRAGLQ------AECSEAIQRDIWFKLWGNMTMNPVSVLTGATCDRILDDPLVSAFCLAVMAEAKAI 247 (335)
T ss_dssp SCCHHHHHHHHHHHHTTCE------EEECSCHHHHHHHHHHTTTTHHHHHHHHCCCHHHHHHSHHHHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHhCCCC------cEeCchHHHHHHHHHHHHhhhhHHHHHhCCChHHHhcChHHHHHHHHHHHHHHHH
Confidence 4567778888888876643 44433434445677665442 23345677888888
Q ss_pred HHHhCCCCH
Q 041006 90 LKHVGGVSN 98 (333)
Q Consensus 90 l~~~~Gld~ 98 (333)
+++ .|+++
T Consensus 248 a~a-~G~~~ 255 (335)
T 3ghy_A 248 GAR-IGCPI 255 (335)
T ss_dssp HHT-TTCCC
T ss_pred HHH-cCCCC
Confidence 885 66554
No 90
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=77.67 E-value=4.4 Score=36.13 Aligned_cols=49 Identities=4% Similarity=-0.088 Sum_probs=38.2
Q ss_pred cCCccEEe-cccCCCHHHHhcCCeecccCCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChh
Q 041006 4 VRRVCLIS-AWGSPGARKARHGPSLMPGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSS 65 (333)
Q Consensus 4 ~~G~~~ld-apVSGg~~gA~~G~sim~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG 65 (333)
.+|+.|+. .|+.|. +.+..++++++++.++++++.+|++ ++++++...-
T Consensus 88 ~~g~~fvg~HPm~g~-------~~~i~a~d~~a~~~l~~L~~~lG~~------vv~~~~~~hd 137 (232)
T 3dfu_A 88 TSGGIVMSAHPIGQD-------RWVASALDELGETIVGLLVGELGGS------IVEIADDKRA 137 (232)
T ss_dssp HTTCEEEEEEEEETT-------EEEEEESSHHHHHHHHHHHHHTTCE------ECCCCGGGHH
T ss_pred hCCCcEEEeeeCCCC-------ceeeeCCCHHHHHHHHHHHHHhCCE------EEEeCHHHHh
Confidence 45778884 788653 3566667999999999999999997 8899875543
No 91
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=77.32 E-value=27 Score=31.37 Aligned_cols=22 Identities=9% Similarity=0.036 Sum_probs=17.5
Q ss_pred hHHHHHHHHHcCCChhHHHHHH
Q 041006 150 GKWTIQQAAELLIAALTIAGSL 171 (333)
Q Consensus 150 ~~~~v~~A~~~GvplP~~~aAl 171 (333)
...++..|.++|+|+|......
T Consensus 256 ~G~vv~~a~~~gv~~P~~~~l~ 277 (294)
T 3g17_A 256 QGFIYRRAREHNLDTPYLDTIY 277 (294)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHH
T ss_pred hhHHHHHHHHhCCCCChHHHHH
Confidence 3468899999999999876543
No 92
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=71.21 E-value=0.019 Score=53.60 Aligned_cols=43 Identities=12% Similarity=0.026 Sum_probs=31.2
Q ss_pred cCCccEEe----ccc-CCCH---HHHhcCC-eecccCCHHHHHHHHHHHHHH
Q 041006 4 VRRVCLIS----AWG-SPGA---RKARHGP-SLMPGGSFEAYNNIQGILQKV 46 (333)
Q Consensus 4 ~~G~~~ld----apV-SGg~---~gA~~G~-sim~GG~~~a~~~v~pvL~~i 46 (333)
++|..|+| +|+ +|+. .++..|+ +.|+||+++.+++..|+|+.+
T Consensus 241 ~~g~~~vD~~~~a~~~~G~~~~~~~~~~g~L~~~v~G~~~~~~~~~~vf~~~ 292 (312)
T 2i99_A 241 KEAVLYVDSQEAALKESGDVLLSGAEIFAELGEVIKGVKPAHCEKTTVFKSL 292 (312)
T ss_dssp HHSEEEESCHHHHHHHCHHHHTTTCCCCEEHHHHHHTSSCCCTTSCEEEECC
T ss_pred hcCEEEECCHHHHHhhcCCcccChhhccccHHHHhCCCCCCCCCCcEEEECC
Confidence 46889999 899 5554 5678888 999999987665554444433
No 93
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=44.34 E-value=38 Score=30.77 Aligned_cols=45 Identities=20% Similarity=0.143 Sum_probs=40.7
Q ss_pred chhhHHHHHHHHHHHHHHHhHHHHHHHHHhccCCCCCCCChHHHHHHhhhc
Q 041006 207 DKKRLIDDVRQALYASKICSYAQGMNLLRSKSNEKGWNLNFGELARIWKDG 257 (333)
Q Consensus 207 ~~~~~~~~lrda~~~~~i~syaQG~~ll~~as~~~~w~~~~~~ia~iWr~G 257 (333)
..++.++.+.+.+.++.+++++|++.+-++ ..+|...+.++|+.|
T Consensus 167 G~g~~~Kl~~N~l~~~~~~a~aEa~~la~~------~Gld~~~~~~vl~~~ 211 (300)
T 3obb_A 167 GAGQVAKVCNNQLLAVLMIGTAEAMALGVA------NGLEAKVLAEIMRRS 211 (300)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHH------TTCCHHHHHHHHHTS
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------cCCCHHHHHHHHHhC
Confidence 457899999999999999999999999876 459999999999987
No 94
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=42.04 E-value=44 Score=30.23 Aligned_cols=45 Identities=4% Similarity=0.062 Sum_probs=41.0
Q ss_pred chhhHHHHHHHHHHHHHHHhHHHHHHHHHhccCCCCCCCChHHHHHHhhhc
Q 041006 207 DKKRLIDDVRQALYASKICSYAQGMNLLRSKSNEKGWNLNFGELARIWKDG 257 (333)
Q Consensus 207 ~~~~~~~~lrda~~~~~i~syaQG~~ll~~as~~~~w~~~~~~ia~iWr~G 257 (333)
..++.++.+.+.+.++.+++++|++.+-++ ..+|..++.++|+.|
T Consensus 168 G~g~~~Kl~~N~~~~~~~~~~aEa~~la~~------~Gld~~~~~~~l~~~ 212 (297)
T 4gbj_A 168 GAANVIKLAGNFMIACSLEMMGEAFTMAEK------NGISRQSIYEMLTST 212 (297)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHH------TTCCHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHhh
Confidence 357899999999999999999999999876 569999999999997
No 95
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=37.26 E-value=98 Score=28.51 Aligned_cols=66 Identities=23% Similarity=0.268 Sum_probs=48.1
Q ss_pred CCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHhcc
Q 041006 31 GSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSSNFVKMVHNGIEYGDMQLISEAYYLLKHVGGVSNAELAEIFDEWNK 110 (333)
Q Consensus 31 G~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG~~vKlv~N~l~~a~m~a~AEg~~Ll~~~~Gld~~~ia~I~~~w~~ 110 (333)
-++++++++..+.+.++.+ ...+-...-|. +.|-|.... +.|++.|+.+ ...++++|-.+ |+.
T Consensus 164 Ts~~~~~~~~~~~~~~gk~------pv~v~kd~pGF----i~NRl~~~~---~~EA~~lv~e-Gvas~edID~~---~~~ 226 (319)
T 3ado_A 164 TSPATVDRTHALMRKIGQS------PVRVLKEIDGF----VLNRLQYAI---ISEAWRLVEE-GIVSPSDLDLV---MSD 226 (319)
T ss_dssp CCHHHHHHHHHHHHHTTCE------EEECSSCCTTT----THHHHHHHH---HHHHHHHHHT-TSSCHHHHHHH---HHT
T ss_pred CcHHHHHHHHHHHHHhCCc------cCCcCCCCCCE----eHHHHHHHH---HHHHHHHHHh-CCCCHHHHHHH---HHh
Confidence 3688999999999999987 44443333344 566665554 4899999996 67899999988 766
Q ss_pred chh
Q 041006 111 GEL 113 (333)
Q Consensus 111 G~i 113 (333)
|..
T Consensus 227 g~g 229 (319)
T 3ado_A 227 GLG 229 (319)
T ss_dssp THH
T ss_pred CCC
Confidence 653
No 96
>3n70_A Transport activator; sigma-54, ntpase, PSI, MCSG, structural genomics, center for structural genomics; 2.80A {Escherichia coli}
Probab=33.13 E-value=60 Score=25.45 Aligned_cols=40 Identities=23% Similarity=0.277 Sum_probs=25.0
Q ss_pred CCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChh--hHHHHHHH
Q 041006 31 GSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSS--NFVKMVHN 73 (333)
Q Consensus 31 G~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG--~~vKlv~N 73 (333)
|..+.+.++...++.++.. ...|...|++|.| +.++.+|+
T Consensus 5 G~s~~~~~~~~~~~~~a~~---~~~vll~G~~GtGKt~lA~~i~~ 46 (145)
T 3n70_A 5 GRSEWINQYRRRLQQLSET---DIAVWLYGAPGTGRMTGARYLHQ 46 (145)
T ss_dssp CSSHHHHHHHHHHHHHTTC---CSCEEEESSTTSSHHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHHHhCC---CCCEEEECCCCCCHHHHHHHHHH
Confidence 4456667777777766642 2347888998777 44555543
No 97
>2lnm_A Protein TIC 40, chloroplastic; translocon, import, TIC40-NP, protein transport; NMR {Arabidopsis thaliana}
Probab=28.33 E-value=15 Score=25.57 Aligned_cols=31 Identities=19% Similarity=0.442 Sum_probs=22.1
Q ss_pred ccCCCCCCCcCcHHHHHHHHHhccCcchhHHH
Q 041006 263 QRNPNLASLVMDPEFAREMVQRRARLPGNLVQ 294 (333)
Q Consensus 263 ~~~~~l~~ll~~~~~~~~~~~~~~~lp~~liq 294 (333)
.+||++..++.+|+|...+++...+ |.++.+
T Consensus 9 ~~dPe~~~~m~dP~~~~~lq~i~~N-P~~~~~ 39 (62)
T 2lnm_A 9 MENPDVAMAFQNPRVQAALMECSEN-PMNIMK 39 (62)
T ss_dssp TTSHHHHHHTTSHHHHHHHHHHTTC-GGGHHH
T ss_pred HcChHHHHHcCCHHHHHHHHHHHHC-HHHHHH
Confidence 3688888889999999998887322 444433
No 98
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B}
Probab=22.12 E-value=41 Score=26.99 Aligned_cols=40 Identities=13% Similarity=0.160 Sum_probs=27.2
Q ss_pred eecccCCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChh--hHHHHHHHH
Q 041006 26 SLMPGGSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSS--NFVKMVHNG 74 (333)
Q Consensus 26 sim~GG~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG--~~vKlv~N~ 74 (333)
.+.+|++.+++..++.+ . ...+..+|+.|+| +.++.+-+.
T Consensus 18 ~f~~g~n~~~~~~l~~~----~-----g~~~~l~G~~G~GKTtL~~~i~~~ 59 (149)
T 2kjq_A 18 KFLGTENAELVYVLRHK----H-----GQFIYVWGEEGAGKSHLLQAWVAQ 59 (149)
T ss_dssp CCCSCCTHHHHHHCCCC----C-----CSEEEEESSSTTTTCHHHHHHHHH
T ss_pred hcCcCccHHHHHHHHhc----C-----CCEEEEECCCCCCHHHHHHHHHHH
Confidence 56778888887776655 1 1357888998887 556665544
No 99
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens}
Probab=21.31 E-value=1.8e+02 Score=24.51 Aligned_cols=46 Identities=15% Similarity=0.161 Sum_probs=29.9
Q ss_pred ccCCHHHHHHHHHHHHHHhccC-------CCCCceEEeCCCChh--hHHHHHHHH
Q 041006 29 PGGSFEAYNNIQGILQKVAAQV-------DDGPCVTYIGEGGSS--NFVKMVHNG 74 (333)
Q Consensus 29 ~GG~~~a~~~v~pvL~~i~~~~-------~~~p~v~~~G~~GaG--~~vKlv~N~ 74 (333)
++|..++.+.++.+++.+-... ...+++...|++|.| ++++.+.+.
T Consensus 8 i~G~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~vll~G~~GtGKT~la~~la~~ 62 (262)
T 2qz4_A 8 VAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATE 62 (262)
T ss_dssp SCSCHHHHHHHHHHHHHHHCCC------CCCCCEEEEESCTTSSHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHCHHHHHHcCCCCCceEEEECCCCCCHHHHHHHHHHH
Confidence 5778888888888776543210 123457888998877 456666553
No 100
>1hqc_A RUVB; extended AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ADE; 3.20A {Thermus thermophilus} SCOP: a.4.5.11 c.37.1.20 PDB: 1ixs_B* 1ixr_C*
Probab=20.30 E-value=1.4e+02 Score=26.18 Aligned_cols=45 Identities=11% Similarity=0.194 Sum_probs=29.2
Q ss_pred CCHHHHHHHHHHHHHHhccCCCCCceEEeCCCChh--hHHHHHHHHH
Q 041006 31 GSFEAYNNIQGILQKVAAQVDDGPCVTYIGEGGSS--NFVKMVHNGI 75 (333)
Q Consensus 31 G~~~a~~~v~pvL~~i~~~~~~~p~v~~~G~~GaG--~~vKlv~N~l 75 (333)
|..+..+.++..++.........+.+...|+.|.| ++++.+++.+
T Consensus 16 g~~~~~~~l~~~l~~~~~~~~~~~~vll~G~~GtGKT~la~~i~~~~ 62 (324)
T 1hqc_A 16 GQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHEL 62 (324)
T ss_dssp SCHHHHHHHHHHHHHHHHHCSCCCCCEEECCTTCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHccCCCCCcEEEECCCCCCHHHHHHHHHHHh
Confidence 45667777877777665322222457788997766 6677777643
Done!