Query 041010
Match_columns 297
No_of_seqs 134 out of 1172
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 04:10:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041010.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041010hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 6.7E-63 2.3E-67 462.8 27.8 287 1-294 140-438 (439)
2 2xr7_A Malonyltransferase; xen 100.0 5.1E-57 1.8E-61 424.6 22.5 283 1-296 147-450 (453)
3 2bgh_A Vinorine synthase; VS, 100.0 2.7E-55 9.3E-60 409.1 22.0 268 1-296 142-415 (421)
4 2e1v_A Acyl transferase; BAHD 100.0 2.9E-56 9.9E-61 419.5 15.1 279 1-296 152-450 (454)
5 2rkv_A Trichothecene 3-O-acety 100.0 2.6E-54 8.9E-59 405.9 22.7 283 1-295 139-444 (451)
6 1q9j_A PAPA5, polyketide synth 98.3 3.7E-05 1.3E-09 70.1 18.1 188 2-197 106-313 (422)
7 1l5a_A Amide synthase, VIBH; n 97.9 0.00031 1.1E-08 64.3 15.1 179 2-197 107-304 (436)
8 4hvm_A Tlmii; PSI-biology, mid 97.9 7.9E-05 2.7E-09 69.7 11.0 185 2-197 123-327 (493)
9 2jgp_A Tyrocidine synthetase 3 97.8 0.00052 1.8E-08 64.5 15.6 180 2-197 203-400 (520)
10 3fot_A 15-O-acetyltransferase; 97.7 0.00044 1.5E-08 65.3 12.9 186 10-197 177-399 (519)
11 2xhg_A Tyrocidine synthetase A 97.3 0.0087 3E-07 55.1 16.7 187 3-199 130-337 (466)
12 2vsq_A Surfactin synthetase su 96.9 0.012 4.1E-07 61.7 14.8 178 8-197 136-327 (1304)
13 2xl1_A Arginine attenuator pep 46.1 13 0.00043 18.6 1.7 17 115-131 8-24 (26)
14 1x93_A Hypothetical protein HP 44.8 15 0.00053 22.1 2.3 38 90-133 2-39 (55)
15 2xt6_A 2-oxoglutarate decarbox 33.1 22 0.00077 36.4 2.9 28 11-38 192-219 (1113)
16 2k1o_A Putative; repressor, tr 28.0 37 0.0013 21.2 2.1 42 87-134 13-54 (66)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=6.7e-63 Score=462.76 Aligned_cols=287 Identities=25% Similarity=0.441 Sum_probs=243.4
Q ss_pred CcEEEeccCcEEEEeeccccccccccHHHHHHHHHHhHhcCCCCCCCCCccccccccCCCCCCCCCCCCcccccCCCccc
Q 041010 1 MKVTRLICGGFVLAFRVNHTMCDAFGFVQFLKAMEEMAWDNAKAPSLLPIWQRELLNARNPPQISCVHHEYDQIDPIKAT 80 (297)
Q Consensus 1 vQvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~~~g~~~~~~~P~~dr~~l~~~~pp~~~~~~~~~~~~~~~~~~ 80 (297)
||||+|+|||++||+++||.++||.|+++|+++||++| ||... +.+|++||+.+.+++||....+|.+|.+.+....+
T Consensus 140 vQvT~f~cGG~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~-rg~~~-~~~P~~dr~~l~~~~pp~~~~~~~~~~~~~~~~~~ 217 (439)
T 4g22_A 140 LQVTYFKCGGVSLGVGMRHHAADGFSGLHFINSWSDMA-RGLDV-TLPPFIDRTLLRARDPPQPQFQHIEYQPPPALAVS 217 (439)
T ss_dssp EEEEECTTSCEEEEEEECTTTCCHHHHHHHHHHHHHHH-TTCCC-SSCCBCCGGGGCCCSSCCCSSCCGGGSCCC-----
T ss_pred EEEEEecCCCEEEEEEeeeccCcHHHHHHHHHHHHHHh-CCCCC-CCCCccccccccCCCCCCCCcCcccccCCCCCccc
Confidence 69999999999999999999999999999999999999 99754 57899999999888888776778888764432211
Q ss_pred cCC--CCC-CCceEEEEEeCHHHHHHHHhhCCCC--CCCCchhHHHHHHHHHHHHHhhCCCCCCceEEEEEEecCCCcCC
Q 041010 81 LRT--KNP-NDLDHKSLFFGPKEILSLRNQLPPH--LKNCTTFELLTACIWRCRTIALGLDPNEIVRVSFTFNIRGKRFN 155 (297)
Q Consensus 81 ~~~--~~~-~~~~~~~f~~~~~~l~~Lk~~~~~~--~~~~St~d~l~A~lW~~~~~ar~~~~~~~~~l~~~vd~R~r~l~ 155 (297)
... ... .++..++|+|++++|++||+.+.++ ..++|+||+|+|++|+|++|||+.++++.+.+.++||+|+| ++
T Consensus 218 ~~~~~~~~~~~~~~~~f~fs~~~i~~LK~~a~~~~~~~~~St~dal~A~iWr~~~rAr~~~~~~~~~l~~~vd~R~r-l~ 296 (439)
T 4g22_A 218 PQTAASDSVPETAVSIFKLTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIATDGRAR-LR 296 (439)
T ss_dssp ----------CEEEEEEEECHHHHHHHHHGGGGGGCCCCCCHHHHHHHHHHHHHHHHTTCCTTCEEEEEEEEECTTT-SS
T ss_pred ccccccCCcccceEEEEEECHHHHHHHHHHhhccCCCCCccHHHHHHHHHHHHHHHhcCCCCCCcEEEEEEEcccCC-CC
Confidence 100 111 5689999999999999999999754 35799999999999999999999888889999999999999 99
Q ss_pred CCCCCCCccCccccceeccchhhhccCCHHHHHHHHHHHHhhcCHhHHHHHHHhhhhcCC-CCCC-----CCCCceEEEe
Q 041010 156 MQIPQGYYGNAFVFPAVCSRVDALCGSPLGYAVELVKEGKAKVSEEYIRSVADLMVTRGR-PVPT-----TMGDLYFIVS 229 (297)
Q Consensus 156 p~lp~~y~GN~~~~~~~~~~~~~l~~~~l~~~A~~ir~ai~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~s 229 (297)
||+|++||||++..+.+.++++||.+++|+++|..||+++.++++||+++.++|++.... ..+. ....+ +.+|
T Consensus 297 Pplp~~Y~GN~v~~~~~~~~~~el~~~~L~~~A~~Ir~ai~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vs 375 (439)
T 4g22_A 297 PSLPPGYFGNVIFTATPIAIAGDLEFKPVWYAASKIHDALARMDNDYLRSALDYLELQPDLKALVRGAHTFKCPN-LGIT 375 (439)
T ss_dssp SCCCTTBCSCCEEEECCEEEHHHHHHSCHHHHHHHHHHHHHTCSHHHHHHHHHHHHTCSCSTTCCCCHHHHCTTC-EEEE
T ss_pred CCCCCCcccceeehhhcceEHHHHhhCcHHHHHHHHHHHHHhhCHHHHHHHHHHHHhCccchhhcccCCcCcCCc-EEEe
Confidence 999999999999999999999999999999999999999999999999999999874321 1111 11226 9999
Q ss_pred eCCCCCcccccccCCcceeeeecc-ccceEEEEecccCCCCCCCcEEEEEecCHHHHHHHHHHHHH
Q 041010 230 DTTRTGFEEIDFGWGKPMFAGIAG-CALFISFYVNYQKKNDGECGIVVPIRLPFSAMERFQEEIKK 294 (297)
Q Consensus 230 sw~~~~~~~~DFG~G~P~~~~~~~-~~~~~~~ilp~~~~~~g~~g~~v~v~L~~~~m~~l~~d~~~ 294 (297)
||+++++|++|||||||+++++.. ..+|.++++|. ++++ +|++|.|+|++++|++|++.++.
T Consensus 376 sw~r~~~y~~DFGwGkP~~~~~~~~~~~g~~~~~p~-~~~~--ggi~v~v~L~~~~m~~f~~~~~~ 438 (439)
T 4g22_A 376 SWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFILPS-PTND--GSMSVAISLQGEHMKLFQSFLYD 438 (439)
T ss_dssp ECTTSCTTCCCCSSCCCSEEEESSCCSTTEEEEEEC-TTCS--SCEEEEEEEEHHHHHHHHHHHTC
T ss_pred ecCcCCccccccCCCCcceeeccccCCCcEEEEeec-CCCC--CcEEEEEECCHHHHHHHHHHhcc
Confidence 999999999999999999999876 36788999997 5443 48999999999999999998754
No 2
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=5.1e-57 Score=424.58 Aligned_cols=283 Identities=20% Similarity=0.324 Sum_probs=226.9
Q ss_pred CcEEEeccCcEEEEeeccccccccccHHHHHHHHHHhHhc-CC-C---CCCCCCccccccccCCCCCCCCCCCC-ccccc
Q 041010 1 MKVTRLICGGFVLAFRVNHTMCDAFGFVQFLKAMEEMAWD-NA-K---APSLLPIWQRELLNARNPPQISCVHH-EYDQI 74 (297)
Q Consensus 1 vQvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~~~-g~-~---~~~~~P~~dr~~l~~~~pp~~~~~~~-~~~~~ 74 (297)
||||+|+|||++||+++||.++||.|+++|+++||++| | |. . .+...|.+||+.+. .|+.....+. .+...
T Consensus 147 vQvT~f~cGG~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~-r~G~~~~~~~~~~~P~~dr~~l~--~p~~~~~~~~~~~~~~ 223 (453)
T 2xr7_A 147 IQVTLFPNHGISIGFTNHHVAGDGATIVKFVRAWALLN-KFGGDEQFLANEFIPFYDRSVIK--DPNGVGMSIWNEMKKY 223 (453)
T ss_dssp EEEEEETTTEEEEEEEECTTTCCSHHHHHHHHHHHHHH-HTTTCGGGSCGGGSCBCCCSSSC--CSSCHHHHTTTTGGGC
T ss_pred EEEEEccCCcEEEEEeeeeeeechhHHHHHHHHHHHHh-hcCCCcccCCCCCCCcccccccc--CCCCcchHHHHhcccc
Confidence 69999999999999999999999999999999999999 8 76 2 13457899998876 3433211111 11110
Q ss_pred CCCccccCCCCCCCceEEEEEeCHHHHHHHHhhCCCCC---CCCchhHHHHHHHHHHHHHhhCC-----CCCCceEEEEE
Q 041010 75 DPIKATLRTKNPNDLDHKSLFFGPKEILSLRNQLPPHL---KNCTTFELLTACIWRCRTIALGL-----DPNEIVRVSFT 146 (297)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~---~~~St~d~l~A~lW~~~~~ar~~-----~~~~~~~l~~~ 146 (297)
+............+...++|+|++++|++||+.+.++. .++|+||+|+|++|+|+++||.. ++++.+.+.++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~f~f~~~~i~~Lk~~a~~~~~~~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~~~~~~l~~~ 303 (453)
T 2xr7_A 224 KHMMKMSDVVTPPDKVRGTFIITRHDIGKLKNLVLTRRPKLTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGMEFFGCA 303 (453)
T ss_dssp TTTSCCSCCCCCCSCCCEEEEECHHHHHHHHHHHHHHSCCCSCCCHHHHHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEE
T ss_pred CCccccccccCCCCceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHHHHhccccccCCCCcceEEEEE
Confidence 11000000012346778999999999999999986422 47999999999999999999975 56778999999
Q ss_pred EecCCCcCCCCCCCCCccCccccceeccchhhhcc-CCHHHHHHHHHHHHhh--cCHh-HHHHHHHhhhhcCCCCCCCCC
Q 041010 147 FNIRGKRFNMQIPQGYYGNAFVFPAVCSRVDALCG-SPLGYAVELVKEGKAK--VSEE-YIRSVADLMVTRGRPVPTTMG 222 (297)
Q Consensus 147 vd~R~r~l~p~lp~~y~GN~~~~~~~~~~~~~l~~-~~l~~~A~~ir~ai~~--~~~~-~~~~~~~~~~~~~~~~~~~~~ 222 (297)
||+|+| ++||+|++||||++..+.+.++++||.+ .+|+++|..||+++.+ .+++ |+++ +|++.... +...+
T Consensus 304 vd~R~r-l~pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~e~~~~~--~~~~~~~~--~~~~~ 378 (453)
T 2xr7_A 304 ADCRAQ-FNPPLPPSYFGNALVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRMKDEEWILSG--SWFKEYDK--VDAKR 378 (453)
T ss_dssp CCTTSC-SSSCCCTTBCSCCCCEEEEEEEHHHHTSSSHHHHHHHHHHHHHTTSSSCHHHHHSS--CTTSCCCC--SCGGG
T ss_pred eccccc-CCCCCCcccccceeeeeeeeeeHHHhcCcchHHHHHHHHHHHHHhhccCCccchhh--HHHHHHHh--hccCC
Confidence 999999 9999999999999999999999999995 8999999999999999 5788 8988 88763221 21222
Q ss_pred CceEEEeeCCCCCcccccccCCcceeeeeccc-cce--EEEEecccCCCCCCCcEEEEEecCHHHHHHHHHHHHHhc
Q 041010 223 DLYFIVSDTTRTGFEEIDFGWGKPMFAGIAGC-ALF--ISFYVNYQKKNDGECGIVVPIRLPFSAMERFQEEIKKMT 296 (297)
Q Consensus 223 ~~~~~~ssw~~~~~~~~DFG~G~P~~~~~~~~-~~~--~~~ilp~~~~~~g~~g~~v~v~L~~~~m~~l~~d~~~~~ 296 (297)
. +.+|||++|++|++|||||||+++++... .+| .++++|+ +++ ++|++|.|+|++++|++|++++.+++
T Consensus 379 -~-~~vssw~~~~~y~~DFG~G~P~~v~~~~~~~~g~~~~~l~~~-~~~--~ggi~v~v~L~~~~m~~f~~~~~~~~ 450 (453)
T 2xr7_A 379 -S-LSVAGSPKLDLYAADFGWGRPEKLEFVSIDNDDGISMSLSKS-KDS--DGDLEIGLSLSKTRMNAFAAMFTHGI 450 (453)
T ss_dssp -E-EEECSCSSCCGGGCCCSSCSCSEEEEGGGSSCSSCEEEEEEC-SSS--TTCEEEEECCCHHHHHHHHHHHHHHH
T ss_pred -c-EEEeccccCCccccccCCCcceEEEeeeecCCCceEEEEeec-CCC--CCCEEEEEEeCHHHHHHHHHHHHHHh
Confidence 6 99999999999999999999999998763 567 7778887 544 45999999999999999999988765
No 3
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=2.7e-55 Score=409.10 Aligned_cols=268 Identities=19% Similarity=0.288 Sum_probs=221.3
Q ss_pred CcEEEeccCcEEEEeeccccccccccHHHHHHHHHHhHhcCCCCCCCCCcccc-ccccCCCCCCCCCCCCcccccCCCcc
Q 041010 1 MKVTRLICGGFVLAFRVNHTMCDAFGFVQFLKAMEEMAWDNAKAPSLLPIWQR-ELLNARNPPQISCVHHEYDQIDPIKA 79 (297)
Q Consensus 1 vQvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~~~g~~~~~~~P~~dr-~~l~~~~pp~~~~~~~~~~~~~~~~~ 79 (297)
||||+|+|||++||+++||.++||.|+++|+++||++| ||...+ ..|.+|| +.+. |+.. ..+. +
T Consensus 142 vQvt~f~cgG~~lg~~~~H~v~Dg~~~~~fl~~wa~~~-rg~~~~-~~P~~dr~~~l~---p~~~--~~~~----~---- 206 (421)
T 2bgh_A 142 VKISFFECGGTAIGVNLSHKIADVLSLATFLNAWTATC-RGETEI-VLPNFDLAARHF---PPVD--NTPS----P---- 206 (421)
T ss_dssp EEEEECTTSCEEEEEEEETTTCCHHHHHHHHHHHHHHH-TTCSCC-CCCBCSHHHHHS---CCCT--TCCC----C----
T ss_pred EEEEEEcCCCEEEEEEeeEEechHHHHHHHHHHHHHHh-cCCCCC-CCCccccccccC---CCcc--cCCC----C----
Confidence 69999999999999999999999999999999999999 987544 6788999 6554 2200 0110 0
Q ss_pred ccCCCCCCCceEEEEEeCHHHHHHHHhhCCCCC--CCCchhHHHHHHHHHHHHHhhCC--CCCCceEEEEEEecCCCcCC
Q 041010 80 TLRTKNPNDLDHKSLFFGPKEILSLRNQLPPHL--KNCTTFELLTACIWRCRTIALGL--DPNEIVRVSFTFNIRGKRFN 155 (297)
Q Consensus 80 ~~~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~--~~~St~d~l~A~lW~~~~~ar~~--~~~~~~~l~~~vd~R~r~l~ 155 (297)
.+ ....+...++|+|++++|++||+.+.++. .++|+||+|+|++|+|+++||.. ++++.+.+.++||+|+| ++
T Consensus 207 ~~--~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~St~d~l~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~r-l~ 283 (421)
T 2bgh_A 207 EL--VPDENVVMKRFVFDKEKIGALRAQASSASEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSR-MN 283 (421)
T ss_dssp CC--CCCSSEEEEEEEECHHHHHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHHHSCCCSCEEEEEEEESGGG-SS
T ss_pred cc--CCccceEEEEEEECHHHHHHHHHHhhccCCCCCCchhHhHHHHHHHHHHHHhcccCCCCCceEEEEEecCccc-cC
Confidence 01 12356889999999999999999997643 47999999999999999999864 24668999999999999 99
Q ss_pred CCCCCCCccCccccceeccchhhhccCCHHHHHHHHHHHHhhcCHhHHHHHHHhhhhcCCCCCCCCCCceEEEeeCCCCC
Q 041010 156 MQIPQGYYGNAFVFPAVCSRVDALCGSPLGYAVELVKEGKAKVSEEYIRSVADLMVTRGRPVPTTMGDLYFIVSDTTRTG 235 (297)
Q Consensus 156 p~lp~~y~GN~~~~~~~~~~~~~l~~~~l~~~A~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~ 235 (297)
||+|++||||++..+.+.+++++ +.+|+++|..||+++.++++++++...++.+.... ... .+. +.+|||++++
T Consensus 284 pplP~~y~GN~~~~~~~~~~~~~--~~~l~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~--~~~-~~~-~~vssw~~~~ 357 (421)
T 2bgh_A 284 PPLPHYAMGNIATLLFAAVDAEW--DKDFPDLIGPLRTSLEKTEDDHNHELLKGMTCLYE--LEP-QEL-LSFTSWCRLG 357 (421)
T ss_dssp SCCCTTBCSCCEEEEEEEECTTC--CCCGGGGHHHHHHHTCCCSSCHHHHHHHHHHHHHT--SCG-GGE-EEEEEETTSC
T ss_pred CCCCCCccceEEEEEEEEecccc--cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--cCC-CCe-EEEeccccCC
Confidence 99999999999999999888876 78999999999999999999999988877653111 111 225 9999999999
Q ss_pred cccccccCCcceeeeeccc-cceEEEEecccCCCCCCCcEEEEEecCHHHHHHHHHHHHHhc
Q 041010 236 FEEIDFGWGKPMFAGIAGC-ALFISFYVNYQKKNDGECGIVVPIRLPFSAMERFQEEIKKMT 296 (297)
Q Consensus 236 ~~~~DFG~G~P~~~~~~~~-~~~~~~ilp~~~~~~g~~g~~v~v~L~~~~m~~l~~d~~~~~ 296 (297)
+|++|||||||+++++... .+|.++++|+ +++ +|++|.|+|++++|++|++++.+..
T Consensus 358 ~y~~DFGwGkP~~v~~~~~~~~g~~~~~p~-~~~---~gi~v~v~L~~~~m~~f~~e~~~~~ 415 (421)
T 2bgh_A 358 FYDLDFGWGKPLSACTTTFPKRNAALLMDT-RSG---DGVEAWLPMAEDEMAMLPVELLSLV 415 (421)
T ss_dssp GGGCCSSSCCCSEEECCCCCSTTEEEEEEC-TTS---SSEEEEEEEEHHHHHHSCHHHHTTB
T ss_pred CcccccCCCccCeecccccCcCCEEEEEec-CCC---CeEEEEEEcCHHHHHHHHHHHHHhh
Confidence 9999999999999998763 5788889997 542 3799999999999999999776653
No 4
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=2.9e-56 Score=419.54 Aligned_cols=279 Identities=20% Similarity=0.279 Sum_probs=219.1
Q ss_pred CcEEEeccCcEEEEeeccccccccccHHHHHHHHHHhHhc-CCC-----CCCCCCccccccccCCCCCCCCCCCC-cccc
Q 041010 1 MKVTRLICGGFVLAFRVNHTMCDAFGFVQFLKAMEEMAWD-NAK-----APSLLPIWQRELLNARNPPQISCVHH-EYDQ 73 (297)
Q Consensus 1 vQvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~~~-g~~-----~~~~~P~~dr~~l~~~~pp~~~~~~~-~~~~ 73 (297)
||||+|+|||++||+++||.++||.|+++|+++||++| | |.. .++..|.+|| .+. +|+ ....+. .+..
T Consensus 152 vQvT~f~cgG~~lg~~~~H~v~Dg~~~~~Fl~awa~~~-r~g~~~~~~~~~~~~P~~dr-~l~--~p~-~~~~~~~~~~~ 226 (454)
T 2e1v_A 152 VQVTLFPNQGIAIGITNHHCLGDASTRFCFLKAWTSIA-RSGNNDESFLANGTRPLYDR-IIK--YPM-LDEAYLKRAKV 226 (454)
T ss_dssp EEEEEETTTEEEEEEEECGGGCCHHHHHHHHHHHHHHH-HTTSCCHHHHHHSCCCBCCC-CCC--CHH-HHHHHHHHTTC
T ss_pred EEEEEecCCcEEEEEEeeeeecchhHHHHHHHHHHHHh-ccCCCccccCCCCCCCcccc-cCC--CCC-cchHHHHhhhc
Confidence 69999999999999999999999999999999999999 7 763 1246789999 765 343 111100 1110
Q ss_pred cCCC---ccccCCCCCCCceEEEEEeCHHHHHHHHhhCCCCC---CCCchhHHHHHHHHHHHHHhhCCCCCCceEEEEEE
Q 041010 74 IDPI---KATLRTKNPNDLDHKSLFFGPKEILSLRNQLPPHL---KNCTTFELLTACIWRCRTIALGLDPNEIVRVSFTF 147 (297)
Q Consensus 74 ~~~~---~~~~~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~---~~~St~d~l~A~lW~~~~~ar~~~~~~~~~l~~~v 147 (297)
.... ..... ....+...++|+|++++|++||+.+.++. .++|+||+|+|++|+|++||| +++.+.+.++|
T Consensus 227 ~~~~~~~~~~~~-~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~~St~d~l~A~lWr~~~~Ar---~~~~~~l~~~v 302 (454)
T 2e1v_A 227 ESFNEDYVTQSL-AGPSDKLRATFILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSR---NDKLQLFGFPI 302 (454)
T ss_dssp TTHHHHCCCCCC-CCCCCEEEEEEEECHHHHHHHHHHHHHHCTTCSCCCHHHHHHHHHHHHHHHHH---CCSEEEEEEEE
T ss_pred cccccccCcccC-CCCCCceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHhhhc---CCCceEEEEEe
Confidence 0000 00000 12346789999999999999999986432 479999999999999999999 56789999999
Q ss_pred ecCCCcCCCCCCCCCccCccccceeccchhhhcc-CCHHHHHHHHHHHHhhcCHhHH----HH-HHHhhhhcCCCCCCCC
Q 041010 148 NIRGKRFNMQIPQGYYGNAFVFPAVCSRVDALCG-SPLGYAVELVKEGKAKVSEEYI----RS-VADLMVTRGRPVPTTM 221 (297)
Q Consensus 148 d~R~r~l~p~lp~~y~GN~~~~~~~~~~~~~l~~-~~l~~~A~~ir~ai~~~~~~~~----~~-~~~~~~~~~~~~~~~~ 221 (297)
|+|+| ++||+|++||||++..+.+.++++||.+ .+|+++|..||+++.+++++|+ ++ ..+|++... ..+ ..
T Consensus 303 d~R~r-l~pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~ 379 (454)
T 2e1v_A 303 DRRAR-MKPPIPTAYFGNCVGGCAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDGVLKDDMESFNDLVS-EGM-PT 379 (454)
T ss_dssp ECGGG-SSSCCCTTBCSCCEEEEEEEEEGGGTSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC-----CHHHH-HCC-CS
T ss_pred cchhc-cCCCCCcccccceeeeEEeecchhhccccccHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHH-hhc-CC
Confidence 99999 9999999999999999999999999995 8999999999999999975444 44 455554211 011 12
Q ss_pred CCceEEEeeCCCCCcccccccCCcceeeeeccc-cceEEEEecccCCCCCCCcEEEEEecCHHHHHHHHHHHHHhc
Q 041010 222 GDLYFIVSDTTRTGFEEIDFGWGKPMFAGIAGC-ALFISFYVNYQKKNDGECGIVVPIRLPFSAMERFQEEIKKMT 296 (297)
Q Consensus 222 ~~~~~~~ssw~~~~~~~~DFG~G~P~~~~~~~~-~~~~~~ilp~~~~~~g~~g~~v~v~L~~~~m~~l~~d~~~~~ 296 (297)
. . +.+|||+++++|++|||||||+++++... .+|.++++|+ +++ ++|++|.|+|++++|++|++++.+++
T Consensus 380 ~-~-~~vssw~~~~~y~~DFG~G~P~~v~~~~~~~~g~~~l~p~-~~~--~ggi~v~v~L~~~~m~~f~~~~~~~~ 450 (454)
T 2e1v_A 380 T-M-TWVSGTPKLRFYDMDFGWGKPKKLETVSIDHNGAISINSC-KES--NEDLEIGVCISATQMEDFVHIFDDGL 450 (454)
T ss_dssp E-E-EEEECCTTSCGGGCCSSSCSCSEEEEGGGGGSSEEEEEEC-SSC--TTSEEEEEEEEHHHHHHHHHHHHHHC
T ss_pred c-e-EEEecCCCCCcccccccCccceEEEeeeeCCCCeEEEEec-CCC--CCCEEEEEEECHHHHHHHHHHHHHHH
Confidence 2 6 99999999999999999999999998763 5688888887 554 44999999999999999999998765
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=2.6e-54 Score=405.93 Aligned_cols=283 Identities=16% Similarity=0.198 Sum_probs=226.1
Q ss_pred CcEEEeccCcEEEEeeccccccccccHHHHHHHHHHhHhcCCCCCC---CCCccccccccC---CCCCCCCCCCCccccc
Q 041010 1 MKVTRLICGGFVLAFRVNHTMCDAFGFVQFLKAMEEMAWDNAKAPS---LLPIWQRELLNA---RNPPQISCVHHEYDQI 74 (297)
Q Consensus 1 vQvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~~~g~~~~~---~~P~~dr~~l~~---~~pp~~~~~~~~~~~~ 74 (297)
||||+| |||++||+++||.++||.|+++|+++||++| ||...+. ..|.+||+.+.+ +.+|.....|++|...
T Consensus 139 vQvT~~-~GG~~lg~~~~H~v~Dg~g~~~Fl~awa~~~-rg~~~~~~~~~~p~~dr~~~~p~~~~~~p~~~~~~~~~~~~ 216 (451)
T 2rkv_A 139 LQLNFI-KGGLILTVNGQHGAMDMVGQDAVIRLLSKAC-RNDPFTEEEMTAMNLDRKTIVPYLENYTIGPEVDHQIVKAD 216 (451)
T ss_dssp EEEEEE-BTEEEEEEEEETTTCCHHHHHHHHHHHHHHH-HTCCCCHHHHHHTTCCSTTSSCCCTTCCCCGGGTTCBCCTT
T ss_pred EEEEEe-cCceeeeeeehhccccHHHHHHHHHHHHHHh-cCCCCCccccccccCchhhccccccccCCCccccccccCCC
Confidence 699965 8999999999999999999999999999999 9865322 257889875443 2344433455555432
Q ss_pred CCCccccCCCCCCCceEEEEEeCHHHHHHHHhhCCCCC----CCCchhHHHHHHHHHHHHHhh-C-CCCCCceEEEEEEe
Q 041010 75 DPIKATLRTKNPNDLDHKSLFFGPKEILSLRNQLPPHL----KNCTTFELLTACIWRCRTIAL-G-LDPNEIVRVSFTFN 148 (297)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~----~~~St~d~l~A~lW~~~~~ar-~-~~~~~~~~l~~~vd 148 (297)
+..... .....++..++|+|++++|++||+.+.++. .++|+||+|+|++|||++||| . .++++.+.+.++||
T Consensus 217 ~~~~~~--~~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~~~~l~~~vd 294 (451)
T 2rkv_A 217 VAGGDA--VLTPVSASWAFFTFSPKAMSELKDAATKTLDASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRAVD 294 (451)
T ss_dssp SCC---------CCEEEEEEEECHHHHHHHHHHHHTTCCTTCSCCCHHHHHHHHHHHHHHHHHTTTSCTTSEEEEEEEEE
T ss_pred CCCCCC--CCCCCCceEEEEEECHHHHHHHHHHHhhhccCCCCCccHHHHHHHHHHHHHHHHHhccCCCCCceEEEEEec
Confidence 211101 112356789999999999999999986542 469999999999999999998 3 46778899999999
Q ss_pred cCCCcCCCCCCCCCccCccccceeccchhhhccCCHHHHHHHHHHHHhhcCHhH-HHHHHHhhhh-cCCCC--CC---CC
Q 041010 149 IRGKRFNMQIPQGYYGNAFVFPAVCSRVDALCGSPLGYAVELVKEGKAKVSEEY-IRSVADLMVT-RGRPV--PT---TM 221 (297)
Q Consensus 149 ~R~r~l~p~lp~~y~GN~~~~~~~~~~~~~l~~~~l~~~A~~ir~ai~~~~~~~-~~~~~~~~~~-~~~~~--~~---~~ 221 (297)
+|+| ++ +|.+||||++..+.+.++++||.+.+|+++|..||+++.+++.++ +++.++|++. .+... +. ..
T Consensus 295 ~R~r-l~--lP~~y~GN~~~~~~~~~~~~el~~~~L~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (451)
T 2rkv_A 295 ARPA-MG--VSNNYPGLLQNMTYHNSTIGEIANESLGATASRLRSELDPASMRQRTRGLATYLHNNPDKSNVSLTADADP 371 (451)
T ss_dssp CHHH-HT--CCTTCCSCCEEEEEEEEEHHHHHHSCHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCSCCTTBCTTTTCCT
T ss_pred cccc-CC--CCCCCcccceeeecccCcHHHhccchHHHHHHHHHHHhcccCchhHHHHHHHHHhcCCCccccccccccCC
Confidence 9999 86 899999999999999999999999999999999999999998888 9999999975 22221 11 12
Q ss_pred CCceEEEeeCCCCCccccccc--CCcceeeeecc--ccceEEEEecccCCCCCCCcEEEEEecCHHHHHHHHHHHHHh
Q 041010 222 GDLYFIVSDTTRTGFEEIDFG--WGKPMFAGIAG--CALFISFYVNYQKKNDGECGIVVPIRLPFSAMERFQEEIKKM 295 (297)
Q Consensus 222 ~~~~~~~ssw~~~~~~~~DFG--~G~P~~~~~~~--~~~~~~~ilp~~~~~~g~~g~~v~v~L~~~~m~~l~~d~~~~ 295 (297)
+.+ +++|||+++++|++||| ||||++++.+. +.+|.++++|. +.+ +|++|.|+|++++|++|++|.|-+
T Consensus 372 ~~~-~~~ssw~~~~~y~~DFG~gwG~P~~v~~~~~~~~~g~~~~~p~--~~~--ggi~v~v~L~~~~m~~f~~d~ef~ 444 (451)
T 2rkv_A 372 STS-VMLSSWAKVGLWDYDFGLGLGKPETVRRPIFEPVESLMYFMPK--KPD--GEFCAALSLRDEDMDRLKADKEWT 444 (451)
T ss_dssp TTC-EEEEECTTCCGGGCCTTCSSCSCSEEECCBCSCCTTEEEECCC--CTT--SCEEEEEEEEHHHHHHHHHCHHHH
T ss_pred CCC-EEEeccccCCccccccCCCCCCceEEEcCCccCCCCEEEEecC--CCC--CCEEEEEEeCHHHHHHHhcCHHHH
Confidence 236 99999999999999998 79999998543 35788888875 333 489999999999999999988743
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=98.31 E-value=3.7e-05 Score=70.14 Aligned_cols=188 Identities=10% Similarity=0.072 Sum_probs=108.5
Q ss_pred cEEEec-cCcEEEEeeccccccccccHHHHHHHHHHhHhc-----CCCCCCCCC--cccc--ccccCC--C---CCCCCC
Q 041010 2 KVTRLI-CGGFVLAFRVNHTMCDAFGFVQFLKAMEEMAWD-----NAKAPSLLP--IWQR--ELLNAR--N---PPQISC 66 (297)
Q Consensus 2 Qvt~f~-~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~~~-----g~~~~~~~P--~~dr--~~l~~~--~---pp~~~~ 66 (297)
+++.++ +++..|.+.+||.++||.|+..|++.|.+.+ + |... ..+| ..+. ...... . .+....
T Consensus 106 r~~l~~~~~~~~l~l~~hH~i~Dg~S~~~l~~~l~~~Y-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (422)
T 1q9j_A 106 HLQLILREGGAELTLYLHHCMADGHHGAVLVDELFSRY-TDAVTTGDPG-PITPQPTPLSMEAVLAQRGIRKQGLSGAER 183 (422)
T ss_dssp EEEEECCSSSCEEEEEEEGGGCCHHHHHHHHHHHHHHH-HHHHHSSSCC-CCCCCCCCBCHHHHHHHSSCCC-----CTT
T ss_pred EEEEEecCCCeEEEEEeceEEEchhhHHHHHHHHHHHH-HHhhccCCCC-CCCCCCCCCCHHHHHHhcCCcccccchhhh
Confidence 345554 5678999999999999999999999999998 5 3322 2122 1110 000000 0 010000
Q ss_pred CCCcccc--cCCCcc-cc--CCCCCCCceEEEEEeCHHHHHHHHhhCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCce
Q 041010 67 VHHEYDQ--IDPIKA-TL--RTKNPNDLDHKSLFFGPKEILSLRNQLPPHLKNCTTFELLTACIWRCRTIALGLDPNEIV 141 (297)
Q Consensus 67 ~~~~~~~--~~~~~~-~~--~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~St~d~l~A~lW~~~~~ar~~~~~~~~ 141 (297)
....|.. ++.... +. ............+.++.+..++|++.+... .+|.+.++.|.+-..+.|-+.. .....
T Consensus 184 ~~~~~W~~~l~~~~~lp~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~--~~t~~~~l~aa~~~~l~r~~~~-~~~~v 260 (422)
T 1q9j_A 184 FMSVMYAYEIPATETPAVLAHPGLPQAVPVTRLWLSKQQTSDLMAFGREH--RLSLNAVVAAAILLTEWQLRNT-PHVPI 260 (422)
T ss_dssp SSTTTTCC-------------CCSBCCCCEEEECCCHHHHHHHHHHHTTT--TCCHHHHHHHHHHHHHHHHHTC-SSCCE
T ss_pred hhhhhhcccCCCcccCCCCCCCCCCCCccceEEEeCHHHHHHHHHHHHHh--CCCHHHHHHHHHHHHHHhcccC-CCceE
Confidence 0112211 110000 00 001112245688899999999999998764 4899999999877777765322 34568
Q ss_pred EEEEEEecCCCcCCCCCCCCCccCccccceeccchhhhccCCHHHHHHHHHHHHhh
Q 041010 142 RVSFTFNIRGKRFNMQIPQGYYGNAFVFPAVCSRVDALCGSPLGYAVELVKEGKAK 197 (297)
Q Consensus 142 ~l~~~vd~R~r~l~p~lp~~y~GN~~~~~~~~~~~~~l~~~~l~~~A~~ir~ai~~ 197 (297)
.+.++++.|.. ..|+++..-+.|.+.+....++.. .+.++.+++..+++.+.+
T Consensus 261 ~~g~~~~~R~~-~~~~~~~~~~~~~vG~f~n~lp~~--~~~~~~~~l~~v~~~~~~ 313 (422)
T 1q9j_A 261 PYVYPVDLRFV-LAPPVAPTEATNLLGAASYLAEIG--PNTDIVDLASDIVATLRA 313 (422)
T ss_dssp EEEEEEETTTT-SSSCCCTTTBSCCEEEEEEEECCC--SSCCHHHHHHHHHHHHHH
T ss_pred EEeeeeecccc-cCCCCChhhhhhhheeeeeeeecc--CCCCHHHHHHHHHHHHHH
Confidence 88999999998 655543222334443333333322 134677888888887765
No 7
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=97.88 E-value=0.00031 Score=64.32 Aligned_cols=179 Identities=9% Similarity=0.018 Sum_probs=108.5
Q ss_pred cEEEec--cCcEEEEeeccccccccccHHHHHHHHHHhHhc----CCCCCCCCCcc-c-----cccccCCCCCCCCCCCC
Q 041010 2 KVTRLI--CGGFVLAFRVNHTMCDAFGFVQFLKAMEEMAWD----NAKAPSLLPIW-Q-----RELLNARNPPQISCVHH 69 (297)
Q Consensus 2 Qvt~f~--~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~~~----g~~~~~~~P~~-d-----r~~l~~~~pp~~~~~~~ 69 (297)
+++.++ ++...|.+.+||.++||.|+..|++.+.+.+ + |...+...+.+ | +..+.. .... ...
T Consensus 107 r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~ 181 (436)
T 1l5a_A 107 SHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHY-QSLLSGQTPTAAFKPYQSYLEEEAAYLTS---HRYW-QDK 181 (436)
T ss_dssp EEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHH-HHHHHTCCCCCCCCCHHHHHHHHHHHHTS---HHHH-HHH
T ss_pred EEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHH-HHHhcCCCCCCCccCHHHHHHHHHHhhcc---HhHH-HHH
Confidence 455553 5678999999999999999999999999998 5 44322111111 0 001110 0000 000
Q ss_pred ccc-----ccCCCcc-ccC-CCCCCCceEEEEEeCHHHHHHHHhhCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCceE
Q 041010 70 EYD-----QIDPIKA-TLR-TKNPNDLDHKSLFFGPKEILSLRNQLPPHLKNCTTFELLTACIWRCRTIALGLDPNEIVR 142 (297)
Q Consensus 70 ~~~-----~~~~~~~-~~~-~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~St~d~l~A~lW~~~~~ar~~~~~~~~~ 142 (297)
.|. ..+.... +.. ...........+.++.+..++|++.+... .+|.+.++.|.+-..+.+-.+ ....
T Consensus 182 ~~W~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~--~~t~~~~l~aa~~~~L~~~~g----~dv~ 255 (436)
T 1l5a_A 182 QFWQGYLREAPDLTLTSATYDPQLSHAVSLSYTLNSQLNHLLLKLANAN--QIGWPDALVALCALYLESAEP----DAPW 255 (436)
T ss_dssp HHHHHHHHTSCCCCBCCTTCCGGGCCEEEEEEECCHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHHST----TCCE
T ss_pred HHHHHHhcCCCCcccCCCCCCCCcccceeeEEecCHHHHHHHHHHHHHh--CCCHHHHHHHHHHHHHHHhhC----CceE
Confidence 110 0000000 000 00112345678899999999999888653 479999999887666665533 4688
Q ss_pred EEEEEecCCCcCCCCCCCCCccCccccceeccchhhhccCCHHHHHHHHHHHHhh
Q 041010 143 VSFTFNIRGKRFNMQIPQGYYGNAFVFPAVCSRVDALCGSPLGYAVELVKEGKAK 197 (297)
Q Consensus 143 l~~~vd~R~r~l~p~lp~~y~GN~~~~~~~~~~~~~l~~~~l~~~A~~ir~ai~~ 197 (297)
+..+++.|.. +--.+-.|+.+........... +.++.+++..+++.+.+
T Consensus 256 ig~~~~~R~~----~~~~~~vG~f~n~lplr~~~~~--~~t~~~~l~~v~~~~~~ 304 (436)
T 1l5a_A 256 LWLPFMNRWG----SVAANVPGLMVNSLPLLRLSAQ--QTSLGNYLKQSGQAIRS 304 (436)
T ss_dssp EEEEECCCTT----SGGGGSCSCCCEEEEEECCCCT--TCBHHHHHHHHHHHHHH
T ss_pred EeeecccCCC----hHHhcCcceEEEEEEEEEecCC--CCCHHHHHHHHHHHHHH
Confidence 9999999976 2234566777666555554332 35788888888887765
No 8
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=97.86 E-value=7.9e-05 Score=69.68 Aligned_cols=185 Identities=10% Similarity=-0.023 Sum_probs=105.8
Q ss_pred cEEEec--cCcEEEEeeccccccccccHHHHHHHHHHhHhcCCCCCCCCCccccccccC-CC--CCC-CCC-CCCcccc-
Q 041010 2 KVTRLI--CGGFVLAFRVNHTMCDAFGFVQFLKAMEEMAWDNAKAPSLLPIWQRELLNA-RN--PPQ-ISC-VHHEYDQ- 73 (297)
Q Consensus 2 Qvt~f~--~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~~~g~~~~~~~P~~dr~~l~~-~~--pp~-~~~-~~~~~~~- 73 (297)
+++.++ ++...|.+.+||+++||.|+..|++.+.+.+ .|...+ .+..| .... .. ... ... ....|..
T Consensus 123 r~~l~~~~~~~~~l~l~~HH~i~Dg~S~~~l~~~l~~~Y-~g~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~W~~ 197 (493)
T 4hvm_A 123 RLHLVRLSETDVVLGVVAHQMLLDARSRYMVLGAVWQAY-YGRFRP--AQYRD--FAEVADFHPLDRETVRVARHRWWSR 197 (493)
T ss_dssp EEEEEECSSSEEEEEEEEETTTCCHHHHHHHHHHHHHHH-TTCCCG--GGSBC--GGGTTTCCTTCSHHHHHHHHHHHHH
T ss_pred EEEEEEECCCcEEEEEecchhhccHHHHHHHHHHHHHHh-CCCCCC--cCHHH--HHHHHhhhhcccChhhHHHHHHHHH
Confidence 455554 4568999999999999999999999999999 887543 22111 1110 00 000 000 0001110
Q ss_pred -cCCCcc-ccCCCCCCCceEEEEEeCHHHHHHHHhhCCCCCCCCc--hhHHHHHHHHHHHHHhhCC--------CCCCce
Q 041010 74 -IDPIKA-TLRTKNPNDLDHKSLFFGPKEILSLRNQLPPHLKNCT--TFELLTACIWRCRTIALGL--------DPNEIV 141 (297)
Q Consensus 74 -~~~~~~-~~~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~S--t~d~l~A~lW~~~~~ar~~--------~~~~~~ 141 (297)
+..... .....+........+.++.+..++|++.+... .+| .+.++.|.+-..+.+-+.. ......
T Consensus 198 ~l~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~--~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g~~dv 275 (493)
T 4hvm_A 198 RLPALPVRGGDGGPVGPPETSRLRVPGSRWQALTEPGGPL--GGNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTGKDSL 275 (493)
T ss_dssp HGGGSCCCC-------CCEEEEEEEEHHHHHHHHCC--------CHHHHHHHHHHHHHHHC----------------CEE
T ss_pred hccCCCCCCCCCCCCCCCeeEEEEcCHHHHHHHHHHHHHc--CCCchHHHHHHHHHHHHHHHhhhcccccccCcCCCCCE
Confidence 000000 00001111256788999999999999998764 467 9999988866666554110 223468
Q ss_pred EEEEEEecCCCcCCCCCCCCCccCccccceeccchhhhccCCHHHHHHHHHHHHhh
Q 041010 142 RVSFTFNIRGKRFNMQIPQGYYGNAFVFPAVCSRVDALCGSPLGYAVELVKEGKAK 197 (297)
Q Consensus 142 ~l~~~vd~R~r~l~p~lp~~y~GN~~~~~~~~~~~~~l~~~~l~~~A~~ir~ai~~ 197 (297)
.+..+++.|.. +--.+.+|+++......+..+...+.++.+++..+++.+.+
T Consensus 276 ~~g~~~~gR~~----~~~~~~vG~f~n~lplr~~~~~~~~~t~~~~l~~v~~~~~~ 327 (493)
T 4hvm_A 276 YLSTEVDLRDH----LQLGSVVGPLTDRVVFGVDLTGLREPSFRDLMSRTQAGFLD 327 (493)
T ss_dssp EEEEEEEHHHH----TTCCSBCSCCEEEEEEEEECTTCSSCBHHHHHHHHHHHHHH
T ss_pred EEEeeccCCCC----cchhcCeEeeeceeEEEEecCCCcCCCHHHHHHHHHHHHHH
Confidence 88999999976 23456778877666665554432246788888888877665
No 9
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=97.80 E-value=0.00052 Score=64.53 Aligned_cols=180 Identities=15% Similarity=0.085 Sum_probs=108.6
Q ss_pred cEEEec--cCcEEEEeeccccccccccHHHHHHHHHHhHhcCCCCCCCC-Cccc-----cccccCCCCCCCCCCCCccc-
Q 041010 2 KVTRLI--CGGFVLAFRVNHTMCDAFGFVQFLKAMEEMAWDNAKAPSLL-PIWQ-----RELLNARNPPQISCVHHEYD- 72 (297)
Q Consensus 2 Qvt~f~--~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~~~g~~~~~~~-P~~d-----r~~l~~~~pp~~~~~~~~~~- 72 (297)
+++.++ ++...|-+.+||.++||.|+..|++.+.+.+ +|...+..+ +..| +.... .+... ....|.
T Consensus 203 r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~el~~~Y-~~~~l~~~~~~~~d~~~~~~~~~~---~~~~~-~~~~yW~ 277 (520)
T 2jgp_A 203 RVSLLKIGEDRYVLFTDMHHSISDGVSSGILLAEWVQLY-QGDVLPELRIQYKDFAVWQQEFSQ---SAAFH-KQEAYWL 277 (520)
T ss_dssp EEEEEEEETTEEEEEEEEBGGGCCHHHHHHHHHHHHHHH-TTCCCCCCSCCHHHHHHHHHHHTT---SHHHH-HHHHHHH
T ss_pred eEEEEEEcCCcEEEEEEccceeecHhHHHHHHHHHHHHH-ccCCCCCCCCCHHHHHHHHHHhhc---ChhhH-HHHHHHH
Confidence 344454 4568899999999999999999999999999 875322211 1111 11110 00000 000110
Q ss_pred ----ccCC---Cc-cccC-CCCCCCceEEEEEeCHHHHHHHHhhCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCceEE
Q 041010 73 ----QIDP---IK-ATLR-TKNPNDLDHKSLFFGPKEILSLRNQLPPHLKNCTTFELLTACIWRCRTIALGLDPNEIVRV 143 (297)
Q Consensus 73 ----~~~~---~~-~~~~-~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~St~d~l~A~lW~~~~~ar~~~~~~~~~l 143 (297)
..+. .+ .... ...........+.++.+..++|++.+... .+|.+.++.|.+-..+.+-.+ .....+
T Consensus 278 ~~l~~~~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~--~~T~~~~l~aa~a~~L~~~~~---~~dv~~ 352 (520)
T 2jgp_A 278 QTFADDIPVLNLPTDFTRPSTQSFAGDQCTIGAGKALTEGLHQLAQAT--GTTLYMVLLAAYNVLLAKYAG---QEDIIV 352 (520)
T ss_dssp HHTSSCCCCCCCCCSSCCCSSCCCBEEEEEEECCHHHHHHHHHHHHHH--TCCHHHHHHHHHHHHHHHHHT---CSCEEE
T ss_pred HHhCCCCCcCCCCCCCCCCCCCCCCccEEEEeCCHHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHhcC---CCCeEE
Confidence 0000 00 0000 01112335677899999999999887543 479999998887777766644 346889
Q ss_pred EEEEecCCCcCCCCCCCCCccCccccceeccchhhhccCCHHHHHHHHHHHHhh
Q 041010 144 SFTFNIRGKRFNMQIPQGYYGNAFVFPAVCSRVDALCGSPLGYAVELVKEGKAK 197 (297)
Q Consensus 144 ~~~vd~R~r~l~p~lp~~y~GN~~~~~~~~~~~~~l~~~~l~~~A~~ir~ai~~ 197 (297)
.++++.|.. - --.+-.|+.+.....+...+. +.++.+++..+++.+.+
T Consensus 353 g~~~~gR~~-~---~~~~~vG~f~n~lplr~~~~~--~~~~~~~l~~v~~~~~~ 400 (520)
T 2jgp_A 353 GTPITGRSH-A---DLEPIVGMFVNTLAMRNKPQR--EKTFSEFLQEVKQNALD 400 (520)
T ss_dssp EEEECCCCS-G---GGTTCCSCCCEEEEEEECCCT--TSBHHHHHHHHHHHHHH
T ss_pred EeccCCCCc-h---hhhccEEeeeeeeeEEecCCC--CCCHHHHHHHHHHHHHH
Confidence 999999976 2 234566777666555544331 35788888888887655
No 10
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=97.68 E-value=0.00044 Score=65.30 Aligned_cols=186 Identities=14% Similarity=0.117 Sum_probs=105.7
Q ss_pred cEEEEeeccccccccccHHHHHHHHHHhHhcCCC---CCCCCCccc-cccccCCCCCCCC-CCCC------cccc-----
Q 041010 10 GFVLAFRVNHTMCDAFGFVQFLKAMEEMAWDNAK---APSLLPIWQ-RELLNARNPPQIS-CVHH------EYDQ----- 73 (297)
Q Consensus 10 G~~l~~~~~H~v~Dg~~~~~fl~~wa~~~~~g~~---~~~~~P~~d-r~~l~~~~pp~~~-~~~~------~~~~----- 73 (297)
-.-|-+.+||.++||.|...|++.+-+.. .... .+...|.++ .+-.....||-.. ...+ +.+.
T Consensus 177 ~~~lv~~~~H~~~DG~g~~~f~~~ll~~L-~~~~~~~~~~~~~~~~~g~E~~~L~P~~e~~~~~p~~~~~~e~~~~~~~~ 255 (519)
T 3fot_A 177 TVEILFHSNHLFWDGIGCRKFVGDLFRLV-GSYIGRSDSREMKKIQWGQEIKNLSPPVVDSLKLDINTLGSEFDDKCTEY 255 (519)
T ss_dssp EEEEEEEECGGGCCHHHHHHHHHHHHHHH-TTSTTC-CGGGSCCCCTTTTGGGSCCCTGGGBSSCGGGCCHHHHHHHHHH
T ss_pred eEEEEEEeCceeEchHhHHHHHHHHHHHH-HhhhccCCccCCCcCCCCcccccCCcCHHHHhCCCCCCCCHHHHHHHHHH
Confidence 36788999999999999999999999888 4221 011223332 1101101121111 0111 1100
Q ss_pred cCCC-cc--ccC---CCCCCCceEEEEEeCHHHHHHHHhhCCCC-CCCCchhHHHHHHHHHHHHHhhC---CCCCCceEE
Q 041010 74 IDPI-KA--TLR---TKNPNDLDHKSLFFGPKEILSLRNQLPPH-LKNCTTFELLTACIWRCRTIALG---LDPNEIVRV 143 (297)
Q Consensus 74 ~~~~-~~--~~~---~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~-~~~~St~d~l~A~lW~~~~~ar~---~~~~~~~~l 143 (297)
.... .. .+. ......-....+.|+.++.++|++.|... ...+|-+.++.|.+-.++.+... .........
T Consensus 256 ~~~~~~~~~~~~~P~~~~~~~~~~~~~~ls~~~t~~L~~~ck~~~~~g~Tvt~~l~Aa~~~al~~~~~~~~~~~~~~~~~ 335 (519)
T 3fot_A 256 TSALVANYKSRGMKFQPGLALPRCVIHKLSADESIDIVKAVKTRLGPGFTISHLTQAAIVLALLDHLKPNDLSDDEVFIS 335 (519)
T ss_dssp HHHHHHHHHSCCSBCCCCCCCEEEEEEECCHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHC----CCTTCCEEE
T ss_pred HHHhhcCCCcccCCCCCCCCCcceEEEEcCHHHHHHHHHHHHhcCCCCeeHHHHHHHHHHHHHHhhcCCcccCCCccEEE
Confidence 0000 00 011 01112234567899999999999999764 23589999998887777766422 112335788
Q ss_pred EEEEecCCCcCCCCCCCCCccCccccceeccch-h---------hhccC-CHHHHHHHHHHHHhh
Q 041010 144 SFTFNIRGKRFNMQIPQGYYGNAFVFPAVCSRV-D---------ALCGS-PLGYAVELVKEGKAK 197 (297)
Q Consensus 144 ~~~vd~R~r~l~p~lp~~y~GN~~~~~~~~~~~-~---------~l~~~-~l~~~A~~ir~ai~~ 197 (297)
.++||+|+. +.++.-.+|||.+........+. . |+.+. .+.+++..+++....
T Consensus 336 ~~pvnlR~~-l~~~~~~n~~~~~~~~~~~~v~~i~~~~~~~~~~e~~~~~~~~~~ar~l~~~y~~ 399 (519)
T 3fot_A 336 PTSVDGRRW-LREDIASNFYAMCQTAAVVRIENLKSITVSHKDEKELQVRALESACRNIKKSYRQ 399 (519)
T ss_dssp EEEEECGGG-BCHHHHTSCCSCCEEEEEEEECCGGGGCCCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred Eeeeecccc-CCCcccccccceeeeeeeeEecCccccccccchhhhhhHhHHHHHHHHHHHHhhc
Confidence 999999999 86555557888887765443321 1 11111 146667777765554
No 11
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=97.33 E-value=0.0087 Score=55.05 Aligned_cols=187 Identities=13% Similarity=0.049 Sum_probs=106.9
Q ss_pred EEEec-cCcEEEEeeccccccccccHHHHHHHHHHhHhc----CCCCCCCCC--cccccccc---C-CCCCCCCCCCCcc
Q 041010 3 VTRLI-CGGFVLAFRVNHTMCDAFGFVQFLKAMEEMAWD----NAKAPSLLP--IWQRELLN---A-RNPPQISCVHHEY 71 (297)
Q Consensus 3 vt~f~-~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~~~----g~~~~~~~P--~~dr~~l~---~-~~pp~~~~~~~~~ 71 (297)
++.++ .++-.|-+.+||.++||.|+..|++.+.+.+ + |... ..+| ..-++... . ...+... ....|
T Consensus 130 ~~l~~~~~~~~l~l~~HH~i~Dg~S~~~l~~el~~~Y-~~~~~g~~~-~l~~~~~~y~~~~~~~~~~~~~~~~~-~~~~~ 206 (466)
T 2xhg_A 130 VALFQTLHGDHLFLAIHHLVVDGISWRILFEDLATGY-AQALAGQAI-SLPEKTDSFQSWSQWLQEYANEADLL-SEIPY 206 (466)
T ss_dssp EEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHH-HHHHTTCCC-CCCCCCSCHHHHHHHHHHHTTSHHHH-TTHHH
T ss_pred EEEEEcCCCCEEEEEeeeeeechhhHHHHHHHHHHHH-HHHHcCCCC-CCCCCCCCHHHHHHHHHHHhcCccch-hhhHH
Confidence 44443 2334467999999999999999999999988 4 3321 1111 10011100 0 0000000 00011
Q ss_pred c-----ccCCCccccCC--C--CCCCceEEEEEeCHHHHHHHHhhCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCceE
Q 041010 72 D-----QIDPIKATLRT--K--NPNDLDHKSLFFGPKEILSLRNQLPPHLKNCTTFELLTACIWRCRTIALGLDPNEIVR 142 (297)
Q Consensus 72 ~-----~~~~~~~~~~~--~--~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~St~d~l~A~lW~~~~~ar~~~~~~~~~ 142 (297)
. ..+...-+... . .........+.++.+..++|++.+... ..+|.++++.|.+-..+.+-.+ .....
T Consensus 207 W~~~l~~~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~-~~~t~~~~llaa~~~~l~~~~~---~~dv~ 282 (466)
T 2xhg_A 207 WESLESQAKNVSLPKDYEVTDCKQKSVRNMRIRLHPEETEQLLKHANQA-YQTEINDLLLAALGLAFAEWSK---LAQIV 282 (466)
T ss_dssp HHHHHHHCCCCCCCCSSCCSSCBGGGEEEEEEECCHHHHHHHHHTGGGT-TTCCHHHHHHHHHHHHHHHHHC---CSEEE
T ss_pred HHHhhccCCcccCCccccccccccccceEEEEEcCHHHHHHHHHHhHHh-hCCCHHHHHHHHHHHHHHHHhC---CCceE
Confidence 0 00000000000 0 011235677899999999998876421 1478999999887777776643 34688
Q ss_pred EEEEEecCCCcCCC-CCCCCCccCccccceeccchhhhccCCHHHHHHHHHHHHhhcC
Q 041010 143 VSFTFNIRGKRFNM-QIPQGYYGNAFVFPAVCSRVDALCGSPLGYAVELVKEGKAKVS 199 (297)
Q Consensus 143 l~~~vd~R~r~l~p-~lp~~y~GN~~~~~~~~~~~~~l~~~~l~~~A~~ir~ai~~~~ 199 (297)
+.++++.|.. ..+ +--.+-+|+.+......+..+. +.++.+++..+++.+..+.
T Consensus 283 ig~~~~gR~~-~~~~~~~~~~vG~f~n~lplr~~~~~--~~~~~~~l~~v~~~~~~~~ 337 (466)
T 2xhg_A 283 IHLEGHGRED-IIEQANVARTVGWFTSQYPVLLDLKQ--TAPLSDYIKLTKENMRKIP 337 (466)
T ss_dssp EEEEECCCCS-CSTTCCCTTCCSCCCEEEEEEEECSC--CCSHHHHHHHHHHHHHHSG
T ss_pred EEecCCCCCc-cccCCCccccccceeeeccEEEecCC--CCCHHHHHHHHHHHHHhCc
Confidence 8899999986 321 1234566776655555444321 3578999999999887764
No 12
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=96.94 E-value=0.012 Score=61.67 Aligned_cols=178 Identities=10% Similarity=0.019 Sum_probs=104.4
Q ss_pred cCcEEEEeeccccccccccHHHHHHHHHHhHhcC----CCCCCCCCc-cccccccCCCCCCCCCCCCccc-----ccCCC
Q 041010 8 CGGFVLAFRVNHTMCDAFGFVQFLKAMEEMAWDN----AKAPSLLPI-WQRELLNARNPPQISCVHHEYD-----QIDPI 77 (297)
Q Consensus 8 ~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~~~g----~~~~~~~P~-~dr~~l~~~~pp~~~~~~~~~~-----~~~~~ 77 (297)
++...|-+.+||+++||.|+..|++.+.+++ ++ ... ..+|. .-++...-....... ....|. ..+..
T Consensus 136 ~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y-~~~~~g~~~-~l~~~~~y~d~~~~~~~~~~~-~~~~yW~~~L~~~~~~ 212 (1304)
T 2vsq_A 136 EESFEWVWSYHHIILDGWCFGIVVQDLFKVY-NALREQKPY-SLPPVKPYKDYIKWLEKQDKQ-ASLRYWREYLEGFEGQ 212 (1304)
T ss_dssp TTEEEEEEEEEGGGCCHHHHHHHHHHHHHHH-HHHHTTCCC-CCCCCCCTHHHHHHHHTSCHH-HHHHHHHHHHTTCCCC
T ss_pred CCcEEEEEecCceeechhhHHHHHHHHHHHH-HHhhcCCCC-CCCCcccHHHHHHHHhcchhh-HHHHHHHHHhCCCCcc
Confidence 5678899999999999999999999999988 53 221 11111 001111000000000 000111 00000
Q ss_pred ---cccc-CCCCCCCceEEEEEeCHHHHHHHHhhCCCCCCCCchhHHHHHHHHHHHHHhhCCCCCCceEEEEEEecCCCc
Q 041010 78 ---KATL-RTKNPNDLDHKSLFFGPKEILSLRNQLPPHLKNCTTFELLTACIWRCRTIALGLDPNEIVRVSFTFNIRGKR 153 (297)
Q Consensus 78 ---~~~~-~~~~~~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~St~d~l~A~lW~~~~~ar~~~~~~~~~l~~~vd~R~r~ 153 (297)
.... ............+.++.+..++||+.+.+. .+|.+.++.|.+-..+.|-.+ .+...+..+++.|..
T Consensus 213 ~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~--~~T~~~vllaa~a~~L~r~tg---~~dvv~G~pvsgR~~- 286 (1304)
T 2vsq_A 213 TTFAEQRKKQKDGYEPKELLFSPSEAETKAFTELAKSQ--HTTLSTALQAVWSVLISRYQQ---SGDLAFGTVVSGRPA- 286 (1304)
T ss_dssp CTTTTTCCCSSCCCCEEEEEECCCHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHHHT---CSEEEEEEEECCCCT-
T ss_pred ccCCCCCCccccccCcceEEEecCHHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHhcC---CCCEEEEEEeCCCCc-
Confidence 0000 001112335677889999999999988653 478999998876666666543 346889999999976
Q ss_pred CCCCCCCCCccCccccceeccchhhhccCCHHHHHHHHHHHHhh
Q 041010 154 FNMQIPQGYYGNAFVFPAVCSRVDALCGSPLGYAVELVKEGKAK 197 (297)
Q Consensus 154 l~p~lp~~y~GN~~~~~~~~~~~~~l~~~~l~~~A~~ir~ai~~ 197 (297)
-.+.+ .+.+|+.+.....+...+ .+.++.++...+++...+
T Consensus 287 ~~~~~-~~~vG~fvntlplr~~~~--~~~s~~~ll~~v~~~~~~ 327 (1304)
T 2vsq_A 287 EIKGV-EHMVGLFINVVPRRVKLS--EGITFNGLLKRLQEQSLQ 327 (1304)
T ss_dssp TSTTG-GGCCSSCCEEEEEEEECC--TTCBHHHHHHHHHHHHHH
T ss_pred cchhh-hcccccceeEEEEEecCC--CCCcHHHHHHHHHHHHHH
Confidence 22222 355666665554444433 145788888888887665
No 13
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=46.05 E-value=13 Score=18.61 Aligned_cols=17 Identities=24% Similarity=0.528 Sum_probs=14.5
Q ss_pred CchhHHHHHHHHHHHHH
Q 041010 115 CTTFELLTACIWRCRTI 131 (297)
Q Consensus 115 ~St~d~l~A~lW~~~~~ 131 (297)
.++.|-++-++|+++..
T Consensus 8 ftsqdylsdhlwralna 24 (26)
T 2xl1_A 8 FTSQDYLSDHLWRALNA 24 (26)
T ss_pred eecHHHHHHHHHHHHhc
Confidence 67889999999998753
No 14
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=44.79 E-value=15 Score=22.10 Aligned_cols=38 Identities=21% Similarity=0.211 Sum_probs=26.2
Q ss_pred eEEEEEeCHHHHHHHHhhCCCCCCCCchhHHHHHHHHHHHHHhh
Q 041010 90 DHKSLFFGPKEILSLRNQLPPHLKNCTTFELLTACIWRCRTIAL 133 (297)
Q Consensus 90 ~~~~f~~~~~~l~~Lk~~~~~~~~~~St~d~l~A~lW~~~~~ar 133 (297)
....|+|+.++-+.|++.|.++... +..+|=+.+.++.
T Consensus 2 ~~Vs~Y~SkEey~~L~klA~eE~eS------V~sfIKR~IlK~l 39 (55)
T 1x93_A 2 RAVSLYFSDEQYQKLEKMANEEEES------VGSYIKRYILKAL 39 (55)
T ss_dssp EEEEEEECHHHHHHHHHHHHHTTSC------TTHHHHHHHHHHH
T ss_pred ceEEEEecHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHH
Confidence 3568999999999999999765433 3344555555543
No 15
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=33.12 E-value=22 Score=36.43 Aligned_cols=28 Identities=14% Similarity=0.293 Sum_probs=26.1
Q ss_pred EEEEeeccccccccccHHHHHHHHHHhH
Q 041010 11 FVLAFRVNHTMCDAFGFVQFLKAMEEMA 38 (297)
Q Consensus 11 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~ 38 (297)
+-|+++++|.|.||.-...|++.+.+.+
T Consensus 192 m~lsls~DHRviDGa~aa~FL~~lk~~L 219 (1113)
T 2xt6_A 192 ITLTSTYDHRIIQGAESGDFLRTIHQLL 219 (1113)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHT
T ss_pred eEEEEEECcceechHHHHHHHHHHHHHH
Confidence 7799999999999999999999888877
No 16
>2k1o_A Putative; repressor, transcriptional regulator, D binding, ribbon-helix-helix, HP0564, JHP0511, unknown funct regulation; NMR {Helicobacter pylori}
Probab=27.98 E-value=37 Score=21.24 Aligned_cols=42 Identities=12% Similarity=0.054 Sum_probs=31.3
Q ss_pred CCceEEEEEeCHHHHHHHHhhCCCCCCCCchhHHHHHHHHHHHHHhhC
Q 041010 87 NDLDHKSLFFGPKEILSLRNQLPPHLKNCTTFELLTACIWRCRTIALG 134 (297)
Q Consensus 87 ~~~~~~~f~~~~~~l~~Lk~~~~~~~~~~St~d~l~A~lW~~~~~ar~ 134 (297)
...-...|+|+.++-+.|.+.|.++. |.+..+|=+.+.++..
T Consensus 13 k~~~~Vs~Y~SkEey~~L~klA~eE~------eSV~sfIKR~IlK~l~ 54 (66)
T 2k1o_A 13 KRNFSVTFYLSKEEHDVLRRLADEEV------ESVNSFVKRHILKTII 54 (66)
T ss_dssp CCCEEEEEEEEHHHHHHHHHHHHTTC------SCHHHHHHHHHHHHHC
T ss_pred ccceEEEEEecHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHH
Confidence 45577889999999999999997654 3455666677766643
Done!