Query 041016
Match_columns 757
No_of_seqs 812 out of 4653
Neff 10.1
Searched_HMMs 13730
Date Mon Mar 25 04:17:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041016.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/041016hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 3.3E-40 2.4E-44 341.3 19.0 274 24-316 2-281 (313)
2 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 1.6E-31 1.2E-35 275.7 19.2 257 424-748 52-313 (313)
3 d2omza2 c.10.2.1 (A:33-416) In 100.0 1.7E-26 1.3E-30 245.3 34.4 343 228-711 41-383 (384)
4 d2omza2 c.10.2.1 (A:33-416) In 100.0 2.3E-26 1.7E-30 244.4 33.4 191 347-573 193-383 (384)
5 d1xkua_ c.10.2.7 (A:) Decorin 99.9 1.7E-24 1.3E-28 221.7 30.5 247 67-367 10-258 (305)
6 d1xkua_ c.10.2.7 (A:) Decorin 99.9 3E-24 2.2E-28 219.8 28.8 272 376-720 12-292 (305)
7 d1ozna_ c.10.2.7 (A:) Reticulo 99.9 9.2E-24 6.7E-28 213.6 19.5 206 110-316 32-238 (284)
8 d1ozna_ c.10.2.7 (A:) Reticulo 99.9 2.5E-23 1.8E-27 210.3 19.8 238 135-374 32-271 (284)
9 d1p9ag_ c.10.2.7 (G:) von Will 99.9 2.6E-22 1.9E-26 200.3 22.1 201 468-715 9-209 (266)
10 d1p9ag_ c.10.2.7 (G:) von Will 99.9 2.4E-21 1.7E-25 193.3 22.0 198 111-316 11-208 (266)
11 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.8 3E-20 2.2E-24 201.6 5.0 116 469-584 312-447 (460)
12 d1jl5a_ c.10.2.6 (A:) Leucine 99.8 3.2E-16 2.3E-20 162.9 35.2 297 111-459 39-337 (353)
13 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.8 2.2E-20 1.6E-24 202.6 2.0 86 630-715 341-440 (460)
14 d1jl5a_ c.10.2.6 (A:) Leucine 99.8 3.8E-16 2.8E-20 162.4 32.6 149 394-588 200-348 (353)
15 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 3.4E-17 2.5E-21 158.7 19.5 185 115-316 24-208 (227)
16 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 7.9E-17 5.7E-21 156.1 19.5 191 105-312 36-226 (227)
17 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.7 6.8E-18 4.9E-22 158.8 8.6 112 110-221 29-140 (192)
18 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 1.3E-16 9.6E-21 152.1 17.0 164 134-311 45-208 (210)
19 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 2E-16 1.5E-20 150.7 18.3 177 478-710 33-209 (210)
20 d2omxa2 c.10.2.1 (A:37-235) In 99.7 2.3E-16 1.7E-20 149.0 18.2 162 133-308 38-199 (199)
21 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.7 1.1E-16 7.8E-21 157.0 15.2 183 136-319 30-217 (242)
22 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.7 7.8E-17 5.7E-21 158.0 14.0 216 138-381 11-232 (242)
23 d2omxa2 c.10.2.1 (A:37-235) In 99.7 4.2E-16 3.1E-20 147.2 18.6 163 107-284 37-199 (199)
24 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.7 5.2E-17 3.8E-21 152.6 11.6 156 518-719 11-167 (192)
25 d2astb2 c.10.1.3 (B:2136-2419) 99.6 1.9E-15 1.4E-19 151.1 10.1 58 159-216 46-104 (284)
26 d2astb2 c.10.1.3 (B:2136-2419) 99.5 3.6E-15 2.6E-19 149.2 9.0 176 398-573 46-235 (284)
27 d1a9na_ c.10.2.4 (A:) Spliceso 99.5 1.2E-14 8.8E-19 131.3 9.3 111 106-220 14-125 (162)
28 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.5 3.4E-15 2.4E-19 154.4 5.6 243 103-365 24-316 (344)
29 d1dcea3 c.10.2.2 (A:444-567) R 99.5 6.6E-14 4.8E-18 120.0 12.3 102 113-220 1-103 (124)
30 d1a9na_ c.10.2.4 (A:) Spliceso 99.5 2.5E-14 1.8E-18 129.1 9.4 111 131-244 14-125 (162)
31 d1dcea3 c.10.2.2 (A:444-567) R 99.5 1.7E-13 1.2E-17 117.3 12.1 102 138-244 1-103 (124)
32 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.4 3.9E-14 2.8E-18 146.3 7.6 40 252-291 90-133 (344)
33 d1m9la_ c.10.3.1 (A:) Outer ar 99.2 1.2E-13 8.5E-18 129.4 -2.9 144 516-707 24-180 (198)
34 d1m9la_ c.10.3.1 (A:) Outer ar 99.2 1.2E-13 8.7E-18 129.3 -3.6 10 300-309 171-180 (198)
35 d2ifga3 c.10.2.7 (A:36-191) Hi 99.2 1.7E-11 1.3E-15 109.4 10.3 103 139-243 12-115 (156)
36 d2ifga3 c.10.2.7 (A:36-191) Hi 99.2 1.7E-11 1.3E-15 109.4 10.1 106 112-220 10-116 (156)
37 d1koha1 c.10.2.3 (A:201-362) m 98.4 6.6E-09 4.8E-13 92.9 -2.8 66 155-220 61-128 (162)
38 d1koha1 c.10.2.3 (A:201-362) m 98.3 4.3E-08 3.1E-12 87.5 -0.0 80 628-707 64-152 (162)
39 d1pgva_ c.10.1.1 (A:) Tropomod 97.7 1.1E-05 8E-10 71.7 4.6 64 513-576 13-85 (167)
40 d1pgva_ c.10.1.1 (A:) Tropomod 97.6 4E-05 2.9E-09 67.9 6.1 64 181-244 13-85 (167)
41 d1io0a_ c.10.1.1 (A:) Tropomod 97.2 4.2E-05 3.1E-09 67.8 1.5 67 510-576 12-87 (166)
42 d1io0a_ c.10.1.1 (A:) Tropomod 96.9 0.00052 3.8E-08 60.4 5.7 64 180-243 14-86 (166)
No 1
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=100.00 E-value=3.3e-40 Score=341.32 Aligned_cols=274 Identities=30% Similarity=0.479 Sum_probs=212.9
Q ss_pred CCcHHHHHHHHHHHhhccCCCCCCCcccccCCCCCCCCCCCCCcc--cceeeeCCCCCcccEEEEEcCCCCCCCCccee-
Q 041016 24 CCPEDQKAALLEFKSLVLGDLADNSSADAMLGGLETWNSSSDCCR--WEMVRCRSRGPSQEVTGLDLNNLFPLDSIVTS- 100 (757)
Q Consensus 24 ~~~~~~~~~ll~~k~~~~~~~~~~~~~~~~~~~~~~w~~~~~~c~--w~gv~c~~~~~~~~v~~l~L~~~~~~~~~~~~- 100 (757)
-|.++||+||++||+++. + + ..+++|..++|||. |.||+|+..+..+||++++|++. .+.|
T Consensus 2 ~c~~~e~~aLl~~k~~~~---~-~-------~~l~sW~~~~d~C~~~w~gv~C~~~~~~~~v~~L~L~~~-----~l~g~ 65 (313)
T d1ogqa_ 2 LCNPQDKQALLQIKKDLG---N-P-------TTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGL-----NLPKP 65 (313)
T ss_dssp CSCHHHHHHHHHHHHHTT---C-C-------GGGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECC-----CCSSC
T ss_pred CCCHHHHHHHHHHHHHCC---C-C-------CcCCCCCCCCCCCCCcCCCeEEeCCCCcEEEEEEECCCC-----CCCCC
Confidence 489999999999999987 3 2 24789998889994 99999998656679999999986 5555
Q ss_pred -eccccccCCCCCCEEeCCC-CCCCCCCCccccCCCCCCCEEeCCCCcCCCCcCccccCCCCCCEEEccCCcCCCccccc
Q 041016 101 -VVLAPIFRIRSLMTLDLSY-NSMQGEVPGTGFANLTRLTYLDLKDNNLNGSIPSQLFNLRYLEFLDLSANAIEGKLSSR 178 (757)
Q Consensus 101 -~~~~~l~~l~~L~~L~Ls~-n~l~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~ 178 (757)
.+|+.++++++|++|+|++ |+++|.+| ..|+++++|++|+|++|++.+..+..+..+.+|+++++++|.+.+.+|..
T Consensus 66 ~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP-~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~ 144 (313)
T d1ogqa_ 66 YPIPSSLANLPYLNFLYIGGINNLVGPIP-PAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPS 144 (313)
T ss_dssp EECCGGGGGCTTCSEEEEEEETTEESCCC-GGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGG
T ss_pred CCCChHHhcCccccccccccccccccccc-cccccccccchhhhccccccccccccccchhhhcccccccccccccCchh
Confidence 5677888888888888875 77887888 67888888888888888888777777788888888888888877777777
Q ss_pred ccCCCCCCEEEccCccCCccCchhccCCCCC-CEEEccccccccccCccccCCCCCCEEEccCCcCcccCcccccCCCCC
Q 041016 179 VAGLKNLKQLILDDNLIQGQIPAEIGNLTNL-HKLSLRQNKFSGGIPLSLLQLRKLETLDLQRNSLSGEIPEDIGTLANI 257 (757)
Q Consensus 179 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L-~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 257 (757)
+.++++|+++++++|.+.+.+|..+..+.++ +.+++++|++++..|..+.++..+ .+++..+...+.+|..+..++++
T Consensus 145 l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l~~~~~~~~~~~~~~~~~~l 223 (313)
T d1ogqa_ 145 ISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDLSRNMLEGDASVLFGSDKNT 223 (313)
T ss_dssp GGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-EEECCSSEEEECCGGGCCTTSCC
T ss_pred hccCcccceeeccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccc
Confidence 8888888888888888877777777777665 777788888877777777665444 67777777777777777777777
Q ss_pred CEEEccCCCCCCccchhhhcCCCCCEEEccCCccccccchhhhccCCCcEEEccCCCCc
Q 041016 258 TILALSNNALTGAIPQSIRNMTKLVTLRLDSNVLSGEISTWLFDLQGMKSLYLGGNKLK 316 (757)
Q Consensus 258 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 316 (757)
+.+++++|.+.+.++ .+..+++|+.|++++|+++|.+|.++.++++|++|+|++|+++
T Consensus 224 ~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~ 281 (313)
T d1ogqa_ 224 QKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLC 281 (313)
T ss_dssp SEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEE
T ss_pred ccccccccccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCccc
Confidence 777777777775543 4666777777777777777777777777777777777776665
No 2
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.97 E-value=1.6e-31 Score=275.69 Aligned_cols=257 Identities=33% Similarity=0.512 Sum_probs=202.8
Q ss_pred ccEEEccCCcccc--cChHhhhccCCCCEEEccC-CcccccCC-CCCCCCcccEEECcCCccccCCCchhhhcccEEEcc
Q 041016 424 VMVLMLSSNNFSG--HVPKSISNIYRLLVLDLSN-NSFSGEFP-AFGSDSLVGHVDISSNRFSGEVPSSFGVTILMLSLS 499 (757)
Q Consensus 424 L~~L~L~~n~l~~--~~~~~l~~l~~L~~L~ls~-n~l~~~~~-~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~l~ 499 (757)
++.|+|++|.+.+ .+|..+.++++|++|++++ |.++|.+| .++++++|++|++++|++
T Consensus 52 v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l------------------ 113 (313)
T d1ogqa_ 52 VNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNV------------------ 113 (313)
T ss_dssp EEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECC------------------
T ss_pred EEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccc------------------
Confidence 4444444444443 2344455555555555543 44444444 344444444444433333
Q ss_pred CCccccccchhccCCCCCCEEeCcCCcccCcchhhccCCCCCCEEEccCCcCccccCcccCCCCCC-CEEECcCCccccc
Q 041016 500 ENKFSGQLPQNLSNLSLLQHLDLHDNNLTGEFPAFLSQLSSLQVLNLRNTALEGSITDGLSNLTSL-QILDLSNNNLLGK 578 (757)
Q Consensus 500 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L-~~L~ls~n~l~~~ 578 (757)
.+..+..+..+..|+++++++|.+.+.+|..+..++.|+++++++|.+.+.+|..+..+..+ +.+++++|++++.
T Consensus 114 ----~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~ 189 (313)
T d1ogqa_ 114 ----SGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGK 189 (313)
T ss_dssp ----EEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEE
T ss_pred ----cccccccccchhhhcccccccccccccCchhhccCcccceeecccccccccccccccccccccccccccccccccc
Confidence 33455567778889999999999988899999999999999999999999999888888776 8899999999998
Q ss_pred CCcccccccccccCCCCCCCCCcccCCccccceeEeeeccCccccccccccccCeEECcCCCCCCcCCccccCCCCCCEE
Q 041016 579 IPSSFGNLQGMIDTPSILPTLPEIFSFPVEIQDLIVNWKNSKRGLSSKSLAIYSLMDLSNNQLSGEIPSSLGSLKGLKSL 658 (757)
Q Consensus 579 ~p~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~L~Ls~n~l~~~~p~~l~~l~~L~~L 658 (757)
.|..+.++.. ..++++++...+.+|..++.+++|+.+
T Consensus 190 ~~~~~~~l~~-------------------------------------------~~l~l~~~~~~~~~~~~~~~~~~l~~l 226 (313)
T d1ogqa_ 190 IPPTFANLNL-------------------------------------------AFVDLSRNMLEGDASVLFGSDKNTQKI 226 (313)
T ss_dssp CCGGGGGCCC-------------------------------------------SEEECCSSEEEECCGGGCCTTSCCSEE
T ss_pred cccccccccc-------------------------------------------ccccccccccccccccccccccccccc
Confidence 8877765432 468999999999999999999999999
Q ss_pred eCCCCCCCccCCcchhCCCCCCEEeCCCCcCccCCCCCccCCCCCCEEeCCCCcceecCCCCCCCCCCCCCccccCCCCC
Q 041016 659 NLSYNQLQGNIPSTFGNLEILETLDLSHNSLSGKIPQTFAKLQQLTSLYLSNNKLSGRIPESPQMDRQIDPVIYANNSGL 738 (757)
Q Consensus 659 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~~gn~~l 738 (757)
++++|.+++.+| .++.+++|+.|+|++|+++|.+|+.|.++++|++|||++|+|+|.||+.+.+.++.... |.||+.+
T Consensus 227 ~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~~~L~~L~~l~-l~~N~~l 304 (313)
T d1ogqa_ 227 HLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSA-YANNKCL 304 (313)
T ss_dssp ECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGG-TCSSSEE
T ss_pred cccccccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCCcccCCCCCHHH-hCCCccc
Confidence 999999998766 58889999999999999999999999999999999999999999999998888998888 9999999
Q ss_pred CCCCCCCCCC
Q 041016 739 CGMQIQVVCP 748 (757)
Q Consensus 739 c~~~l~~~c~ 748 (757)
||.|++ .|+
T Consensus 305 ~g~plp-~c~ 313 (313)
T d1ogqa_ 305 CGSPLP-ACT 313 (313)
T ss_dssp ESTTSS-CCC
T ss_pred cCCCCC-CCC
Confidence 999984 774
No 3
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.95 E-value=1.7e-26 Score=245.35 Aligned_cols=343 Identities=27% Similarity=0.320 Sum_probs=208.2
Q ss_pred cCCCCCCEEEccCCcCcccCcccccCCCCCCEEEccCCCCCCccchhhhcCCCCCEEEccCCccccccchhhhccCCCcE
Q 041016 228 LQLRKLETLDLQRNSLSGEIPEDIGTLANITILALSNNALTGAIPQSIRNMTKLVTLRLDSNVLSGEISTWLFDLQGMKS 307 (757)
Q Consensus 228 ~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 307 (757)
..+.+|++|+++++.++.. +.+..+++|++|++++|++++.. .++++++|++|++++|.+.+..+ +..+++|+.
T Consensus 41 ~~l~~l~~L~l~~~~I~~l--~gl~~L~nL~~L~Ls~N~l~~l~--~l~~L~~L~~L~L~~n~i~~i~~--l~~l~~L~~ 114 (384)
T d2omza2 41 TDLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADITP--LANLTNLTG 114 (384)
T ss_dssp HHHTTCCEEECCSSCCCCC--TTGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred HHhCCCCEEECCCCCCCCc--cccccCCCCCEEeCcCCcCCCCc--cccCCcccccccccccccccccc--ccccccccc
Confidence 3455666677766666532 34556666666666666666432 25566666666666666553221 445555555
Q ss_pred EEccCCCCcCCCcccccCCcccceeecCCccCccCcchhccCCCCCCEEEccCCcccCcccccccCccccEEEcCCCcCC
Q 041016 308 LYLGGNKLKWNDNVSIVPKCMLTELSLRSCSVRGSIPLWLSTQTELTFLDLSENELEGTYPQWLSELNLGTVILSDNMLT 387 (757)
Q Consensus 308 L~L~~n~l~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~l~ 387 (757)
|+++++.++ +.. .......+.......|.+....+.
T Consensus 115 L~~~~~~~~------------------------~~~--~~~~~~~~~~~~~~~~~l~~~~~~------------------ 150 (384)
T d2omza2 115 LTLFNNQIT------------------------DID--PLKNLTNLNRLELSSNTISDISAL------------------ 150 (384)
T ss_dssp EECCSSCCC------------------------CCG--GGTTCTTCSEEEEEEEEECCCGGG------------------
T ss_pred ccccccccc------------------------ccc--cccccccccccccccccccccccc------------------
Confidence 555554443 111 122223344444444443322111
Q ss_pred CCCCCCccCCCCCCEEeCcCccccccCCcccCCCCCccEEEccCCcccccChHhhhccCCCCEEEccCCcccccCCCCCC
Q 041016 388 GSLPPPLFESRNLSVLVLSRNNFSGELPETIGQSTSVMVLMLSSNNFSGHVPKSISNIYRLLVLDLSNNSFSGEFPAFGS 467 (757)
Q Consensus 388 ~~~~~~l~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ls~n~l~~~~~~~~~ 467 (757)
............... .....+...+.........|... ....+..+++++.+++++|.++
T Consensus 151 -----~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~l~l~~n~i~-------- 210 (384)
T d2omza2 151 -----SGLTSLQQLSFGNQV-----TDLKPLANLTTLERLDISSNKVS--DISVLAKLTNLESLIATNNQIS-------- 210 (384)
T ss_dssp -----TTCTTCSEEEEEESC-----CCCGGGTTCTTCCEEECCSSCCC--CCGGGGGCTTCSEEECCSSCCC--------
T ss_pred -----ccccccccccccccc-----chhhhhccccccccccccccccc--cccccccccccceeeccCCccC--------
Confidence 000001111111111 11112333344444444444332 2233445555555555555544
Q ss_pred CCcccEEECcCCccccCCCchhhhcccEEEccCCccccccchhccCCCCCCEEeCcCCcccCcchhhccCCCCCCEEEcc
Q 041016 468 DSLVGHVDISSNRFSGEVPSSFGVTILMLSLSENKFSGQLPQNLSNLSLLQHLDLHDNNLTGEFPAFLSQLSSLQVLNLR 547 (757)
Q Consensus 468 ~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls 547 (757)
+..|......++.+++++|.++.. ..+..+++|+.|++++|.+++..+ +..+++|++|+++
T Consensus 211 ---------------~~~~~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~ 271 (384)
T d2omza2 211 ---------------DITPLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLG 271 (384)
T ss_dssp ---------------CCGGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECC
T ss_pred ---------------CCCcccccCCCCEEECCCCCCCCc--chhhcccccchhccccCccCCCCc--ccccccCCEeecc
Confidence 333333333355555555555432 357788999999999999886544 7788999999999
Q ss_pred CCcCccccCcccCCCCCCCEEECcCCcccccCCcccccccccccCCCCCCCCCcccCCccccceeEeeeccCcccccccc
Q 041016 548 NTALEGSITDGLSNLTSLQILDLSNNNLLGKIPSSFGNLQGMIDTPSILPTLPEIFSFPVEIQDLIVNWKNSKRGLSSKS 627 (757)
Q Consensus 548 ~n~l~~~~~~~l~~l~~L~~L~ls~n~l~~~~p~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 627 (757)
+|++.+.. .+..++.++.+++++|.+.+. ..+..
T Consensus 272 ~~~l~~~~--~~~~~~~l~~l~~~~n~l~~~--~~~~~------------------------------------------ 305 (384)
T d2omza2 272 ANQISNIS--PLAGLTALTNLELNENQLEDI--SPISN------------------------------------------ 305 (384)
T ss_dssp SSCCCCCG--GGTTCTTCSEEECCSSCCSCC--GGGGG------------------------------------------
T ss_pred CcccCCCC--ccccccccccccccccccccc--cccch------------------------------------------
Confidence 99988544 377888999999999988642 12222
Q ss_pred ccccCeEECcCCCCCCcCCccccCCCCCCEEeCCCCCCCccCCcchhCCCCCCEEeCCCCcCccCCCCCccCCCCCCEEe
Q 041016 628 LAIYSLMDLSNNQLSGEIPSSLGSLKGLKSLNLSYNQLQGNIPSTFGNLEILETLDLSHNSLSGKIPQTFAKLQQLTSLY 707 (757)
Q Consensus 628 ~~~l~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 707 (757)
++.++.|++++|++++.. .+..+++|++|++++|++++. + .|+++++|++|++++|++++..| +.++++|++|+
T Consensus 306 ~~~l~~L~ls~n~l~~l~--~l~~l~~L~~L~L~~n~l~~l-~-~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L~~L~ 379 (384)
T d2omza2 306 LKNLTYLTLYFNNISDIS--PVSSLTKLQRLFFANNKVSDV-S-SLANLTNINWLSAGHNQISDLTP--LANLTRITQLG 379 (384)
T ss_dssp CTTCSEEECCSSCCSCCG--GGGGCTTCCEEECCSSCCCCC-G-GGGGCTTCCEEECCSSCCCBCGG--GTTCTTCSEEE
T ss_pred hcccCeEECCCCCCCCCc--ccccCCCCCEEECCCCCCCCC-h-hHcCCCCCCEEECCCCcCCCChh--hccCCCCCEee
Confidence 344588999999998754 388999999999999999864 3 68999999999999999998765 88999999999
Q ss_pred CCCC
Q 041016 708 LSNN 711 (757)
Q Consensus 708 ls~N 711 (757)
|++|
T Consensus 380 L~~N 383 (384)
T d2omza2 380 LNDQ 383 (384)
T ss_dssp CCCE
T ss_pred CCCC
Confidence 9987
No 4
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.95 E-value=2.3e-26 Score=244.39 Aligned_cols=191 Identities=25% Similarity=0.300 Sum_probs=114.9
Q ss_pred ccCCCCCCEEEccCCcccCcccccccCccccEEEcCCCcCCCCCCCCccCCCCCCEEeCcCccccccCCcccCCCCCccE
Q 041016 347 LSTQTELTFLDLSENELEGTYPQWLSELNLGTVILSDNMLTGSLPPPLFESRNLSVLVLSRNNFSGELPETIGQSTSVMV 426 (757)
Q Consensus 347 l~~~~~L~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~ 426 (757)
+..+++++.+++++|.+++..|. .....++++++++|+++. + +.+..+++|+.+++++|.+++..+ +..+++|++
T Consensus 193 ~~~l~~~~~l~l~~n~i~~~~~~-~~~~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~ 267 (384)
T d2omza2 193 LAKLTNLESLIATNNQISDITPL-GILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTE 267 (384)
T ss_dssp GGGCTTCSEEECCSSCCCCCGGG-GGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSE
T ss_pred cccccccceeeccCCccCCCCcc-cccCCCCEEECCCCCCCC-c-chhhcccccchhccccCccCCCCc--ccccccCCE
Confidence 44555566666666555543321 111114444444444332 1 234455666666666666654322 455566666
Q ss_pred EEccCCcccccChHhhhccCCCCEEEccCCcccccCCCCCCCCcccEEECcCCccccCCCchhhhcccEEEccCCccccc
Q 041016 427 LMLSSNNFSGHVPKSISNIYRLLVLDLSNNSFSGEFPAFGSDSLVGHVDISSNRFSGEVPSSFGVTILMLSLSENKFSGQ 506 (757)
Q Consensus 427 L~L~~n~l~~~~~~~l~~l~~L~~L~ls~n~l~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~l~~n~l~~~ 506 (757)
|++++|++++.. .+..++.++.++++.|.+.+ ++.+..+++ ++.+++++|++++.
T Consensus 268 L~l~~~~l~~~~--~~~~~~~l~~l~~~~n~l~~-~~~~~~~~~----------------------l~~L~ls~n~l~~l 322 (384)
T d2omza2 268 LKLGANQISNIS--PLAGLTALTNLELNENQLED-ISPISNLKN----------------------LTYLTLYFNNISDI 322 (384)
T ss_dssp EECCSSCCCCCG--GGTTCTTCSEEECCSSCCSC-CGGGGGCTT----------------------CSEEECCSSCCSCC
T ss_pred eeccCcccCCCC--cccccccccccccccccccc-ccccchhcc----------------------cCeEECCCCCCCCC
Confidence 666666655332 24445555555555555442 223333334 55555555666554
Q ss_pred cchhccCCCCCCEEeCcCCcccCcchhhccCCCCCCEEEccCCcCccccCcccCCCCCCCEEECcCC
Q 041016 507 LPQNLSNLSLLQHLDLHDNNLTGEFPAFLSQLSSLQVLNLRNTALEGSITDGLSNLTSLQILDLSNN 573 (757)
Q Consensus 507 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~n 573 (757)
. .+..+++|++|++++|++++ ++ .+.++++|++|++++|++++..| +.++++|+.|+|++|
T Consensus 323 ~--~l~~l~~L~~L~L~~n~l~~-l~-~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 323 S--PVSSLTKLQRLFFANNKVSD-VS-SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp G--GGGGCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECCSSCCCBCGG--GTTCTTCSEEECCCE
T ss_pred c--ccccCCCCCEEECCCCCCCC-Ch-hHcCCCCCCEEECCCCcCCCChh--hccCCCCCEeeCCCC
Confidence 3 37788999999999999884 44 58889999999999999987654 888999999999987
No 5
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.93 E-value=1.7e-24 Score=221.67 Aligned_cols=247 Identities=24% Similarity=0.304 Sum_probs=178.4
Q ss_pred cccceeeeCCCCCcccEEEEEcCCCCCCCCcceeeccccccCCCCCCEEeCCCCCCCCCCCccccCCCCCCCEEeCCCCc
Q 041016 67 CRWEMVRCRSRGPSQEVTGLDLNNLFPLDSIVTSVVLAPIFRIRSLMTLDLSYNSMQGEVPGTGFANLTRLTYLDLKDNN 146 (757)
Q Consensus 67 c~w~gv~c~~~~~~~~v~~l~L~~~~~~~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~i~~~~~~~l~~L~~L~Ls~n~ 146 (757)
|.|.+|.|+..+ ++ .+|+.+. +.+++|+|++|+++ .+|..+|.++++|++|++++|.
T Consensus 10 c~~~~~~C~~~~-------------------L~-~lP~~l~--~~l~~L~Ls~N~i~-~l~~~~f~~l~~L~~L~l~~n~ 66 (305)
T d1xkua_ 10 CHLRVVQCSDLG-------------------LE-KVPKDLP--PDTALLDLQNNKIT-EIKDGDFKNLKNLHTLILINNK 66 (305)
T ss_dssp EETTEEECTTSC-------------------CC-SCCCSCC--TTCCEEECCSSCCC-CBCTTTTTTCTTCCEEECCSSC
T ss_pred ecCCEEEecCCC-------------------CC-ccCCCCC--CCCCEEECcCCcCC-CcChhHhhcccccccccccccc
Confidence 789999998631 11 2333342 57889999999887 5665678888999999999998
Q ss_pred CCCCcCccccCCCCCCEEEccCCcCCCcccccccCCCCCCEEEccCccCCccCchhccCCCCCCEEEccccccc--cccC
Q 041016 147 LNGSIPSQLFNLRYLEFLDLSANAIEGKLSSRVAGLKNLKQLILDDNLIQGQIPAEIGNLTNLHKLSLRQNKFS--GGIP 224 (757)
Q Consensus 147 l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~--~~~~ 224 (757)
+....|..|.++++|++|++++|+++..... ....++.|++.+|.+.+..+..+.....++.++...|... ...+
T Consensus 67 ~~~i~~~~f~~l~~L~~L~l~~n~l~~l~~~---~~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~ 143 (305)
T d1xkua_ 67 ISKISPGAFAPLVKLERLYLSKNQLKELPEK---MPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIEN 143 (305)
T ss_dssp CCCBCTTTTTTCTTCCEEECCSSCCSBCCSS---CCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCT
T ss_pred ccccchhhhhCCCccCEecccCCccCcCccc---hhhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCc
Confidence 8877778888889999999998888754332 2357788888888888766666777777888887776542 3344
Q ss_pred ccccCCCCCCEEEccCCcCcccCcccccCCCCCCEEEccCCCCCCccchhhhcCCCCCEEEccCCccccccchhhhccCC
Q 041016 225 LSLLQLRKLETLDLQRNSLSGEIPEDIGTLANITILALSNNALTGAIPQSIRNMTKLVTLRLDSNVLSGEISTWLFDLQG 304 (757)
Q Consensus 225 ~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~ 304 (757)
..+..+++|+++++++|.++. +|.. .+++|+.|++++|...+..+..+.+++.+++|++++|.+++..+.++..+++
T Consensus 144 ~~~~~l~~L~~l~l~~n~l~~-l~~~--~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~ 220 (305)
T d1xkua_ 144 GAFQGMKKLSYIRIADTNITT-IPQG--LPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPH 220 (305)
T ss_dssp TGGGGCTTCCEEECCSSCCCS-CCSS--CCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTT
T ss_pred cccccccccCccccccCCccc-cCcc--cCCccCEEECCCCcCCCCChhHhhcccccccccccccccccccccccccccc
Confidence 566777788888888777763 3333 2567777777777777666677777777777777777777666666677777
Q ss_pred CcEEEccCCCCcCCCcccccCCcccceeecCCccCccCcchhccCCCCCCEEEccCCcccCcc
Q 041016 305 MKSLYLGGNKLKWNDNVSIVPKCMLTELSLRSCSVRGSIPLWLSTQTELTFLDLSENELEGTY 367 (757)
Q Consensus 305 L~~L~L~~n~l~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~ 367 (757)
|++|+|++|+++ .+|.++..+++|++|++++|+++...
T Consensus 221 L~~L~L~~N~L~-------------------------~lp~~l~~l~~L~~L~Ls~N~i~~i~ 258 (305)
T d1xkua_ 221 LRELHLNNNKLV-------------------------KVPGGLADHKYIQVVYLHNNNISAIG 258 (305)
T ss_dssp CCEEECCSSCCS-------------------------SCCTTTTTCSSCCEEECCSSCCCCCC
T ss_pred ceeeeccccccc-------------------------ccccccccccCCCEEECCCCccCccC
Confidence 777777766665 45667777888888888888877443
No 6
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.93 E-value=3e-24 Score=219.82 Aligned_cols=272 Identities=23% Similarity=0.286 Sum_probs=190.6
Q ss_pred ccEEEcCCCcCCCCCCCCccCCCCCCEEeCcCccccccCCcccCCCCCccEEEccCCcccccChHhhhccCCCCEEEccC
Q 041016 376 LGTVILSDNMLTGSLPPPLFESRNLSVLVLSRNNFSGELPETIGQSTSVMVLMLSSNNFSGHVPKSISNIYRLLVLDLSN 455 (757)
Q Consensus 376 L~~L~l~~n~l~~~~~~~l~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ls~ 455 (757)
.+.++-+++.++ .+|..+. +++++|+|++|+++...+..|.++++|++|++++|.+....|..|.++++|++|++++
T Consensus 12 ~~~~~C~~~~L~-~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~ 88 (305)
T d1xkua_ 12 LRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 88 (305)
T ss_dssp TTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCC-ccCCCCC--CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccC
Confidence 455555555555 4555543 5678888888877765556677777788888888777766677777777777777777
Q ss_pred CcccccCCCCCCCCcccEEECcCCccccCCCchhhhcccEEEccCCccccccchhccCCCCCCEEeCcCCccc--Ccchh
Q 041016 456 NSFSGEFPAFGSDSLVGHVDISSNRFSGEVPSSFGVTILMLSLSENKFSGQLPQNLSNLSLLQHLDLHDNNLT--GEFPA 533 (757)
Q Consensus 456 n~l~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~--~~~~~ 533 (757)
|+++. +| ..+...+..|.+.+|.+.+..+..+.....++.++...|... ...+.
T Consensus 89 n~l~~-l~-----------------------~~~~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~ 144 (305)
T d1xkua_ 89 NQLKE-LP-----------------------EKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENG 144 (305)
T ss_dssp SCCSB-CC-----------------------SSCCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTT
T ss_pred CccCc-Cc-----------------------cchhhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCcc
Confidence 77653 22 112222344455555555555555666777777777776433 34455
Q ss_pred hccCCCCCCEEEccCCcCccccCcccCCCCCCCEEECcCCcccccCCcccccccccccCCCCCCCCCcccCCccccceeE
Q 041016 534 FLSQLSSLQVLNLRNTALEGSITDGLSNLTSLQILDLSNNNLLGKIPSSFGNLQGMIDTPSILPTLPEIFSFPVEIQDLI 613 (757)
Q Consensus 534 ~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~n~l~~~~p~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~ 613 (757)
.+..+++|+++++++|.+.. ++.. .+++|++|++++|..++..+..|.+++.+
T Consensus 145 ~~~~l~~L~~l~l~~n~l~~-l~~~--~~~~L~~L~l~~n~~~~~~~~~~~~~~~l------------------------ 197 (305)
T d1xkua_ 145 AFQGMKKLSYIRIADTNITT-IPQG--LPPSLTELHLDGNKITKVDAASLKGLNNL------------------------ 197 (305)
T ss_dssp GGGGCTTCCEEECCSSCCCS-CCSS--CCTTCSEEECTTSCCCEECTGGGTTCTTC------------------------
T ss_pred ccccccccCccccccCCccc-cCcc--cCCccCEEECCCCcCCCCChhHhhccccc------------------------
Confidence 67777888888888887763 3433 25778888888888877777666655444
Q ss_pred eeeccCccccccccccccCeEECcCCCCCCcCCccccCCCCCCEEeCCCCCCCccCCcchhCCCCCCEEeCCCCcCccCC
Q 041016 614 VNWKNSKRGLSSKSLAIYSLMDLSNNQLSGEIPSSLGSLKGLKSLNLSYNQLQGNIPSTFGNLEILETLDLSHNSLSGKI 693 (757)
Q Consensus 614 ~~~~~~~~~~~~~~~~~l~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 693 (757)
+.|++++|.+++..+..+.++++|++|+|++|+++ .+|++|..+++|++|+|++|+|+.+.
T Consensus 198 ------------------~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~~i~ 258 (305)
T d1xkua_ 198 ------------------AKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIG 258 (305)
T ss_dssp ------------------CEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCC
T ss_pred ------------------cccccccccccccccccccccccceeeeccccccc-ccccccccccCCCEEECCCCccCccC
Confidence 77888888888777888888899999999999988 55778888999999999999988764
Q ss_pred CCCc------cCCCCCCEEeCCCCcce-ecCCCC
Q 041016 694 PQTF------AKLQQLTSLYLSNNKLS-GRIPES 720 (757)
Q Consensus 694 p~~l------~~l~~L~~L~ls~N~l~-g~iP~~ 720 (757)
...| ..+.+|+.|++++|++. ..+|.+
T Consensus 259 ~~~f~~~~~~~~~~~L~~L~L~~N~~~~~~~~~~ 292 (305)
T d1xkua_ 259 SNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPS 292 (305)
T ss_dssp TTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGG
T ss_pred hhhccCcchhcccCCCCEEECCCCcCccCcCCHh
Confidence 4443 45688999999999985 556543
No 7
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.91 E-value=9.2e-24 Score=213.58 Aligned_cols=206 Identities=27% Similarity=0.267 Sum_probs=132.2
Q ss_pred CCCCEEeCCCCCCCCCCCccccCCCCCCCEEeCCCCcCCCCcCccccCCCCCCEEEcc-CCcCCCcccccccCCCCCCEE
Q 041016 110 RSLMTLDLSYNSMQGEVPGTGFANLTRLTYLDLKDNNLNGSIPSQLFNLRYLEFLDLS-ANAIEGKLSSRVAGLKNLKQL 188 (757)
Q Consensus 110 ~~L~~L~Ls~n~l~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls-~n~l~~~~~~~~~~l~~L~~L 188 (757)
+.+++|+|++|+|+ .+|..+|.++++|++|++++|.+....+..+..+..++.++.. .+.+....+..|+++++|++|
T Consensus 32 ~~~~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L 110 (284)
T d1ozna_ 32 AASQRIFLHGNRIS-HVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (284)
T ss_dssp TTCSEEECTTSCCC-EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCCEEECcCCcCC-CCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEE
Confidence 45677777777776 4554567777777777777777766666666666666666654 445555556666666667777
Q ss_pred EccCccCCccCchhccCCCCCCEEEccccccccccCccccCCCCCCEEEccCCcCcccCcccccCCCCCCEEEccCCCCC
Q 041016 189 ILDDNLIQGQIPAEIGNLTNLHKLSLRQNKFSGGIPLSLLQLRKLETLDLQRNSLSGEIPEDIGTLANITILALSNNALT 268 (757)
Q Consensus 189 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 268 (757)
++++|.+....+..+...++|+.+++++|.+++..+..|..+++|++|++++|++++..+..|..+++|+.+++++|+++
T Consensus 111 ~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~ 190 (284)
T d1ozna_ 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA 190 (284)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred ecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhhhhhcccc
Confidence 66666666555555666666666666666666555556666666666666666666655566666666666666666666
Q ss_pred CccchhhhcCCCCCEEEccCCccccccchhhhccCCCcEEEccCCCCc
Q 041016 269 GAIPQSIRNMTKLVTLRLDSNVLSGEISTWLFDLQGMKSLYLGGNKLK 316 (757)
Q Consensus 269 ~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 316 (757)
+..|..|.++++|++|++++|.+.+..+..+..+++|++|++++|.+.
T Consensus 191 ~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~ 238 (284)
T d1ozna_ 191 HVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (284)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred ccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCC
Confidence 666666666666666666666666555555656666666666665544
No 8
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=2.5e-23 Score=210.31 Aligned_cols=238 Identities=24% Similarity=0.207 Sum_probs=152.8
Q ss_pred CCCCEEeCCCCcCCCCcCccccCCCCCCEEEccCCcCCCcccccccCCCCCCEEEcc-CccCCccCchhccCCCCCCEEE
Q 041016 135 TRLTYLDLKDNNLNGSIPSQLFNLRYLEFLDLSANAIEGKLSSRVAGLKNLKQLILD-DNLIQGQIPAEIGNLTNLHKLS 213 (757)
Q Consensus 135 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~-~n~l~~~~p~~~~~l~~L~~L~ 213 (757)
+.+++|+|++|.|+...+.+|.++++|++|++++|.+..+.+..+.++..++.++.. .+.++...+..|.++++|++|+
T Consensus 32 ~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~ 111 (284)
T d1ozna_ 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (284)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEe
Confidence 456777777777764444566777777777777777776666666777777776654 3445555566677777777777
Q ss_pred ccccccccccCccccCCCCCCEEEccCCcCcccCcccccCCCCCCEEEccCCCCCCccchhhhcCCCCCEEEccCCcccc
Q 041016 214 LRQNKFSGGIPLSLLQLRKLETLDLQRNSLSGEIPEDIGTLANITILALSNNALTGAIPQSIRNMTKLVTLRLDSNVLSG 293 (757)
Q Consensus 214 L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 293 (757)
+++|.+....+..+....+|+.+++++|.+++..+..|..+++|++|++++|++++..+..|.++++|+++++++|++++
T Consensus 112 l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~ 191 (284)
T d1ozna_ 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 191 (284)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred cCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhhhhhccccc
Confidence 77777665555566666777777777777766555666667777777777777766666667777777777777777776
Q ss_pred ccchhhhccCCCcEEEccCCCCcCCCcccccCCcccceeecCCccCccCcch-hccCCCCCCEEEccCCcccCccccccc
Q 041016 294 EISTWLFDLQGMKSLYLGGNKLKWNDNVSIVPKCMLTELSLRSCSVRGSIPL-WLSTQTELTFLDLSENELEGTYPQWLS 372 (757)
Q Consensus 294 ~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~-~l~~~~~L~~L~l~~n~l~~~~~~~~~ 372 (757)
..|..|..+++|++|++++|.+.......+.....|++|++++|.+....+. |+. ..++.+....+++....|..+.
T Consensus 192 i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C~C~~~~l~--~~l~~~~~~~~~~~C~~p~~l~ 269 (284)
T d1ozna_ 192 VHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLW--AWLQKFRGSSSEVPCSLPQRLA 269 (284)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHH--HHHHHCCSEECCCBEEESGGGT
T ss_pred cChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCCCccchHHH--HHHHhCcCCCCceEeCCchHHc
Confidence 6667777777777777777777766666666666677777777666543221 110 1122333344455545555554
Q ss_pred Cc
Q 041016 373 EL 374 (757)
Q Consensus 373 ~~ 374 (757)
+.
T Consensus 270 g~ 271 (284)
T d1ozna_ 270 GR 271 (284)
T ss_dssp TC
T ss_pred CC
Confidence 43
No 9
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=2.6e-22 Score=200.34 Aligned_cols=201 Identities=25% Similarity=0.259 Sum_probs=171.7
Q ss_pred CCcccEEECcCCccccCCCchhhhcccEEEccCCccccccchhccCCCCCCEEeCcCCcccCcchhhccCCCCCCEEEcc
Q 041016 468 DSLVGHVDISSNRFSGEVPSSFGVTILMLSLSENKFSGQLPQNLSNLSLLQHLDLHDNNLTGEFPAFLSQLSSLQVLNLR 547 (757)
Q Consensus 468 ~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls 547 (757)
...+.+++.+++.++. +|..++..+++|+|++|++++..+..|.++++|++|+|++|+++. ++ .++.+++|++|+++
T Consensus 9 ~~~~~~v~C~~~~L~~-iP~~lp~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~Ls 85 (266)
T d1p9ag_ 9 VASHLEVNCDKRNLTA-LPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQ-VDGTLPVLGTLDLS 85 (266)
T ss_dssp STTCCEEECTTSCCSS-CCSCCCTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EE-CCSCCTTCCEEECC
T ss_pred cCCCeEEEccCCCCCe-eCcCcCcCCCEEECcCCcCCCcCHHHhhccccccccccccccccc-cc-cccccccccccccc
Confidence 3445566777777774 566666678899999999988877899999999999999999984 44 35789999999999
Q ss_pred CCcCccccCcccCCCCCCCEEECcCCcccccCCcccccccccccCCCCCCCCCcccCCccccceeEeeeccCcccccccc
Q 041016 548 NTALEGSITDGLSNLTSLQILDLSNNNLLGKIPSSFGNLQGMIDTPSILPTLPEIFSFPVEIQDLIVNWKNSKRGLSSKS 627 (757)
Q Consensus 548 ~n~l~~~~~~~l~~l~~L~~L~ls~n~l~~~~p~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 627 (757)
+|++.+ .+..+..+++|+.|++++|.+.+..+..+..+.
T Consensus 86 ~N~l~~-~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~---------------------------------------- 124 (266)
T d1p9ag_ 86 HNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLG---------------------------------------- 124 (266)
T ss_dssp SSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCT----------------------------------------
T ss_pred cccccc-cccccccccccccccccccccceeecccccccc----------------------------------------
Confidence 999984 567889999999999999998866555554443
Q ss_pred ccccCeEECcCCCCCCcCCccccCCCCCCEEeCCCCCCCccCCcchhCCCCCCEEeCCCCcCccCCCCCccCCCCCCEEe
Q 041016 628 LAIYSLMDLSNNQLSGEIPSSLGSLKGLKSLNLSYNQLQGNIPSTFGNLEILETLDLSHNSLSGKIPQTFAKLQQLTSLY 707 (757)
Q Consensus 628 ~~~l~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 707 (757)
.++.|++++|.++...+..+..++.|++|++++|++++..++.|..+++|++|+|++|+|+ .+|+.+..+++|+.|+
T Consensus 125 --~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~ 201 (266)
T d1p9ag_ 125 --ELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAF 201 (266)
T ss_dssp --TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEE
T ss_pred --ccccccccccccceeccccccccccchhcccccccccccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEE
Confidence 4488999999999888888899999999999999999999999999999999999999999 6788888999999999
Q ss_pred CCCCccee
Q 041016 708 LSNNKLSG 715 (757)
Q Consensus 708 ls~N~l~g 715 (757)
|++|++..
T Consensus 202 L~~Np~~C 209 (266)
T d1p9ag_ 202 LHGNPWLC 209 (266)
T ss_dssp CCSCCBCC
T ss_pred ecCCCCCC
Confidence 99999864
No 10
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=2.4e-21 Score=193.30 Aligned_cols=198 Identities=24% Similarity=0.238 Sum_probs=124.2
Q ss_pred CCCEEeCCCCCCCCCCCccccCCCCCCCEEeCCCCcCCCCcCccccCCCCCCEEEccCCcCCCcccccccCCCCCCEEEc
Q 041016 111 SLMTLDLSYNSMQGEVPGTGFANLTRLTYLDLKDNNLNGSIPSQLFNLRYLEFLDLSANAIEGKLSSRVAGLKNLKQLIL 190 (757)
Q Consensus 111 ~L~~L~Ls~n~l~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 190 (757)
.+.+.|.++++++ .+| ..+. +++++|+|++|.+++..+.+|.++++|++|+|++|+++.. + .++.+++|++|++
T Consensus 11 ~~~~v~C~~~~L~-~iP-~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l-~-~~~~l~~L~~L~L 84 (266)
T d1p9ag_ 11 SHLEVNCDKRNLT-ALP-PDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-Q-VDGTLPVLGTLDL 84 (266)
T ss_dssp TCCEEECTTSCCS-SCC-SCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-E-CCSCCTTCCEEEC
T ss_pred CCeEEEccCCCCC-eeC-cCcC--cCCCEEECcCCcCCCcCHHHhhcccccccccccccccccc-c-ccccccccccccc
Confidence 3444555555665 455 2222 3566666666666644445566666666666666666533 2 2455666666666
Q ss_pred cCccCCccCchhccCCCCCCEEEccccccccccCccccCCCCCCEEEccCCcCcccCcccccCCCCCCEEEccCCCCCCc
Q 041016 191 DDNLIQGQIPAEIGNLTNLHKLSLRQNKFSGGIPLSLLQLRKLETLDLQRNSLSGEIPEDIGTLANITILALSNNALTGA 270 (757)
Q Consensus 191 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 270 (757)
++|++++ .+..+..+++|++|++++|.+....+..+..+.++++|++++|.++...+..+..+++++.+++++|++++.
T Consensus 85 s~N~l~~-~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~ 163 (266)
T d1p9ag_ 85 SHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTEL 163 (266)
T ss_dssp CSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCC
T ss_pred ccccccc-cccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhccccccccccc
Confidence 6666653 345566666666777666666655556666666677777777666655555566666777777777777666
Q ss_pred cchhhhcCCCCCEEEccCCccccccchhhhccCCCcEEEccCCCCc
Q 041016 271 IPQSIRNMTKLVTLRLDSNVLSGEISTWLFDLQGMKSLYLGGNKLK 316 (757)
Q Consensus 271 ~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 316 (757)
.+..|..+++|++|+|++|+++ .+|..+..+++|+.|+|++|.+.
T Consensus 164 ~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 164 PAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (266)
T ss_dssp CTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred CccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCC
Confidence 6666666777777777777766 56666666677777777777654
No 11
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=3e-20 Score=201.56 Aligned_cols=116 Identities=23% Similarity=0.231 Sum_probs=74.8
Q ss_pred CcccEEECcCCccccCCCchhhh------cccEEEccCCccccc----cchhcc-CCCCCCEEeCcCCcccCc----chh
Q 041016 469 SLVGHVDISSNRFSGEVPSSFGV------TILMLSLSENKFSGQ----LPQNLS-NLSLLQHLDLHDNNLTGE----FPA 533 (757)
Q Consensus 469 ~~L~~L~l~~n~l~~~~~~~~~~------~l~~L~l~~n~l~~~----~~~~~~-~l~~L~~L~Ls~n~l~~~----~~~ 533 (757)
..|+.+++++|.++......+.. .++.|++++|.++.. ++..+. ..+.|++|+|++|.+++. ++.
T Consensus 312 ~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~ 391 (460)
T d1z7xw1 312 CQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAA 391 (460)
T ss_dssp CCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHH
T ss_pred cccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChHHHHHHHH
Confidence 45556666666555443332221 267777777777543 233333 467799999999998743 445
Q ss_pred hccCCCCCCEEEccCCcCccccC----cccC-CCCCCCEEECcCCcccccCCcccc
Q 041016 534 FLSQLSSLQVLNLRNTALEGSIT----DGLS-NLTSLQILDLSNNNLLGKIPSSFG 584 (757)
Q Consensus 534 ~l~~l~~L~~L~Ls~n~l~~~~~----~~l~-~l~~L~~L~ls~n~l~~~~p~~~~ 584 (757)
.+..+++|++|+|++|+++.... +.+. +...|+.|++.+|.+.......+.
T Consensus 392 ~l~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~l~l~~~~~~~~~~~~l~ 447 (460)
T d1z7xw1 392 TLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRLQ 447 (460)
T ss_dssp HHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCHHHHHHHH
T ss_pred HHhcCCCCCEEECCCCcCCHHHHHHHHHHHHhCCCccCEEECCCCCCCHHHHHHHH
Confidence 56678899999999999875333 2232 345799999999988765554443
No 12
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.77 E-value=3.2e-16 Score=162.95 Aligned_cols=297 Identities=25% Similarity=0.279 Sum_probs=162.4
Q ss_pred CCCEEeCCCCCCCCCCCccccCCCCCCCEEeCCCCcCCCCcCccccCCCCCCEEEccCCcCCCcccccccCCCCCCEEEc
Q 041016 111 SLMTLDLSYNSMQGEVPGTGFANLTRLTYLDLKDNNLNGSIPSQLFNLRYLEFLDLSANAIEGKLSSRVAGLKNLKQLIL 190 (757)
Q Consensus 111 ~L~~L~Ls~n~l~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 190 (757)
++++|||+++.++ .+| + .+++|++|+|++|+++ .+|+.+ .+|+.|++++|+++.. +. + .+.|++|++
T Consensus 39 ~l~~LdLs~~~L~-~lp-~---~~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~~l-~~-l--p~~L~~L~L 105 (353)
T d1jl5a_ 39 QAHELELNNLGLS-SLP-E---LPPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLKAL-SD-L--PPLLEYLGV 105 (353)
T ss_dssp TCSEEECTTSCCS-CCC-S---CCTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCSCC-CS-C--CTTCCEEEC
T ss_pred CCCEEEeCCCCCC-CCC-C---CCCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccchh-hh-h--ccccccccc
Confidence 5677788877776 566 3 2467788888888887 666543 4677778888777633 11 1 135788888
Q ss_pred cCccCCccCchhccCCCCCCEEEccccccccccCccccCCCCCCEEEccCCcCcccCcccccCCCCCCEEEccCCCCCCc
Q 041016 191 DDNLIQGQIPAEIGNLTNLHKLSLRQNKFSGGIPLSLLQLRKLETLDLQRNSLSGEIPEDIGTLANITILALSNNALTGA 270 (757)
Q Consensus 191 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 270 (757)
++|.+. .+|. ++.+++|++|+++++.+... +. ....+..+.+..+... ....+..++.++.+.+++|.....
T Consensus 106 ~~n~l~-~lp~-~~~l~~L~~L~l~~~~~~~~-~~---~~~~l~~l~~~~~~~~--~~~~l~~l~~l~~L~l~~n~~~~~ 177 (353)
T d1jl5a_ 106 SNNQLE-KLPE-LQNSSFLKIIDVDNNSLKKL-PD---LPPSLEFIAAGNNQLE--ELPELQNLPFLTAIYADNNSLKKL 177 (353)
T ss_dssp CSSCCS-SCCC-CTTCTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCS--SCCCCTTCTTCCEEECCSSCCSSC
T ss_pred cccccc-cccc-hhhhccceeecccccccccc-cc---ccccccchhhcccccc--ccccccccccceeccccccccccc
Confidence 888777 3443 56778888888887777632 22 2356667777665543 234566777778888877766532
Q ss_pred cchhhhcCCCCCEEEccCCccccccchhhhccCCCcEEEccCCCCcCCCcccccCCcccceeecCCccCccCcchhccCC
Q 041016 271 IPQSIRNMTKLVTLRLDSNVLSGEISTWLFDLQGMKSLYLGGNKLKWNDNVSIVPKCMLTELSLRSCSVRGSIPLWLSTQ 350 (757)
Q Consensus 271 ~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~ 350 (757)
+. .....+.+...++.+. .++ .+..++.|+.+++++|...... .....+..+.+.++.+... + ...
T Consensus 178 -~~---~~~~~~~l~~~~~~~~-~~~-~~~~l~~L~~l~l~~n~~~~~~----~~~~~l~~~~~~~~~~~~~-~---~~~ 243 (353)
T d1jl5a_ 178 -PD---LPLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKTLP----DLPPSLEALNVRDNYLTDL-P---ELP 243 (353)
T ss_dssp -CC---CCTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSSCC----SCCTTCCEEECCSSCCSCC-C---CCC
T ss_pred -cc---cccccccccccccccc-ccc-cccccccccccccccccccccc----ccccccccccccccccccc-c---ccc
Confidence 11 1123445555554443 222 2456677777777777654221 1222345555555544321 1 123
Q ss_pred CCCCEEEccCCcccCcccccccCc--cccEEEcCCCcCCCCCCCCccCCCCCCEEeCcCccccccCCcccCCCCCccEEE
Q 041016 351 TELTFLDLSENELEGTYPQWLSEL--NLGTVILSDNMLTGSLPPPLFESRNLSVLVLSRNNFSGELPETIGQSTSVMVLM 428 (757)
Q Consensus 351 ~~L~~L~l~~n~l~~~~~~~~~~~--~L~~L~l~~n~l~~~~~~~l~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~ 428 (757)
+.+...++..+.+.+. ..+ .....++..+.+.+. ...+++|++|++++|+++ .+|. .+++|+.|+
T Consensus 244 ~~l~~~~~~~~~~~~l-----~~l~~~~~~~~~~~~~~~~~----~~~~~~L~~L~Ls~N~l~-~lp~---~~~~L~~L~ 310 (353)
T d1jl5a_ 244 QSLTFLDVSENIFSGL-----SELPPNLYYLNASSNEIRSL----CDLPPSLEELNVSNNKLI-ELPA---LPPRLERLI 310 (353)
T ss_dssp TTCCEEECCSSCCSEE-----SCCCTTCCEEECCSSCCSEE----CCCCTTCCEEECCSSCCS-CCCC---CCTTCCEEE
T ss_pred cccccccccccccccc-----ccccchhcccccccCccccc----cccCCCCCEEECCCCccC-cccc---ccCCCCEEE
Confidence 3455555555444321 111 123334444433311 122355666666666655 2332 234566666
Q ss_pred ccCCcccccChHhhhccCCCCEEEccCCccc
Q 041016 429 LSSNNFSGHVPKSISNIYRLLVLDLSNNSFS 459 (757)
Q Consensus 429 L~~n~l~~~~~~~l~~l~~L~~L~ls~n~l~ 459 (757)
+++|+++ .+|. .+.+|++|++++|+++
T Consensus 311 L~~N~L~-~l~~---~~~~L~~L~L~~N~L~ 337 (353)
T d1jl5a_ 311 ASFNHLA-EVPE---LPQNLKQLHVEYNPLR 337 (353)
T ss_dssp CCSSCCS-CCCC---CCTTCCEEECCSSCCS
T ss_pred CCCCcCC-cccc---ccCCCCEEECcCCcCC
Confidence 6666655 2332 1335555555555554
No 13
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77 E-value=2.2e-20 Score=202.55 Aligned_cols=86 Identities=24% Similarity=0.200 Sum_probs=48.9
Q ss_pred ccCeEECcCCCCCCc----CCcccc-CCCCCCEEeCCCCCCCcc----CCcchhCCCCCCEEeCCCCcCccCCCCCc---
Q 041016 630 IYSLMDLSNNQLSGE----IPSSLG-SLKGLKSLNLSYNQLQGN----IPSTFGNLEILETLDLSHNSLSGKIPQTF--- 697 (757)
Q Consensus 630 ~l~~L~Ls~n~l~~~----~p~~l~-~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l--- 697 (757)
.|+.|||++|++++. ++..+. ..+.|++|+|++|++++. +++.+..+++|++|+|++|+++......+
T Consensus 341 ~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~l~~~ 420 (460)
T d1z7xw1 341 FLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVES 420 (460)
T ss_dssp SCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHH
T ss_pred chhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChHHHHHHHHHHhcCCCCCEEECCCCcCCHHHHHHHHHH
Confidence 446666666666532 222232 345677777777777642 33445566777777777777664322222
Q ss_pred -c-CCCCCCEEeCCCCccee
Q 041016 698 -A-KLQQLTSLYLSNNKLSG 715 (757)
Q Consensus 698 -~-~l~~L~~L~ls~N~l~g 715 (757)
. +...|++|++.+|++..
T Consensus 421 l~~~~~~L~~l~l~~~~~~~ 440 (460)
T d1z7xw1 421 VRQPGCLLEQLVLYDIYWSE 440 (460)
T ss_dssp HTSTTCCCCEEECTTCCCCH
T ss_pred HHhCCCccCEEECCCCCCCH
Confidence 1 23457777777777654
No 14
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.76 E-value=3.8e-16 Score=162.40 Aligned_cols=149 Identities=23% Similarity=0.258 Sum_probs=85.7
Q ss_pred ccCCCCCCEEeCcCccccccCCcccCCCCCccEEEccCCcccccChHhhhccCCCCEEEccCCcccccCCCCCCCCcccE
Q 041016 394 LFESRNLSVLVLSRNNFSGELPETIGQSTSVMVLMLSSNNFSGHVPKSISNIYRLLVLDLSNNSFSGEFPAFGSDSLVGH 473 (757)
Q Consensus 394 l~~~~~L~~L~L~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ls~n~l~~~~~~~~~~~~L~~ 473 (757)
...++.|+.+++++|.... .+. ...++..+.+.++.+.... . ....+...++..+.+.+...
T Consensus 200 ~~~l~~L~~l~l~~n~~~~-~~~---~~~~l~~~~~~~~~~~~~~-~---~~~~l~~~~~~~~~~~~l~~---------- 261 (353)
T d1jl5a_ 200 LQNLPFLTTIYADNNLLKT-LPD---LPPSLEALNVRDNYLTDLP-E---LPQSLTFLDVSENIFSGLSE---------- 261 (353)
T ss_dssp CTTCTTCCEEECCSSCCSS-CCS---CCTTCCEEECCSSCCSCCC-C---CCTTCCEEECCSSCCSEESC----------
T ss_pred ccccccccccccccccccc-ccc---ccccccccccccccccccc-c---cccccccccccccccccccc----------
Confidence 3456677777777776542 222 2345666666666554221 1 12334444444443321100
Q ss_pred EECcCCccccCCCchhhhcccEEEccCCccccccchhccCCCCCCEEeCcCCcccCcchhhccCCCCCCEEEccCCcCcc
Q 041016 474 VDISSNRFSGEVPSSFGVTILMLSLSENKFSGQLPQNLSNLSLLQHLDLHDNNLTGEFPAFLSQLSSLQVLNLRNTALEG 553 (757)
Q Consensus 474 L~l~~n~l~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~ 553 (757)
........++..+.+.+. ...+++|++|++++|+++ .+|. .+++|++|++++|+++
T Consensus 262 ---------------l~~~~~~~~~~~~~~~~~----~~~~~~L~~L~Ls~N~l~-~lp~---~~~~L~~L~L~~N~L~- 317 (353)
T d1jl5a_ 262 ---------------LPPNLYYLNASSNEIRSL----CDLPPSLEELNVSNNKLI-ELPA---LPPRLERLIASFNHLA- 317 (353)
T ss_dssp ---------------CCTTCCEEECCSSCCSEE----CCCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCS-
T ss_pred ---------------ccchhcccccccCccccc----cccCCCCCEEECCCCccC-cccc---ccCCCCEEECCCCcCC-
Confidence 011123344455544432 234678999999999888 5554 3578999999999987
Q ss_pred ccCcccCCCCCCCEEECcCCcccccCCcccccccc
Q 041016 554 SITDGLSNLTSLQILDLSNNNLLGKIPSSFGNLQG 588 (757)
Q Consensus 554 ~~~~~l~~l~~L~~L~ls~n~l~~~~p~~~~~l~~ 588 (757)
.+|+. +++|++|++++|+++ .+|.....++.
T Consensus 318 ~l~~~---~~~L~~L~L~~N~L~-~lp~~~~~L~~ 348 (353)
T d1jl5a_ 318 EVPEL---PQNLKQLHVEYNPLR-EFPDIPESVED 348 (353)
T ss_dssp CCCCC---CTTCCEEECCSSCCS-SCCCCCTTCCE
T ss_pred ccccc---cCCCCEEECcCCcCC-CCCccccccCe
Confidence 45543 467899999999986 55654444443
No 15
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.74 E-value=3.4e-17 Score=158.69 Aligned_cols=185 Identities=23% Similarity=0.327 Sum_probs=99.8
Q ss_pred EeCCCCCCCCCCCccccCCCCCCCEEeCCCCcCCCCcCccccCCCCCCEEEccCCcCCCcccccccCCCCCCEEEccCcc
Q 041016 115 LDLSYNSMQGEVPGTGFANLTRLTYLDLKDNNLNGSIPSQLFNLRYLEFLDLSANAIEGKLSSRVAGLKNLKQLILDDNL 194 (757)
Q Consensus 115 L~Ls~n~l~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 194 (757)
++++.+.+++.+. ++.+.+|++|++.+|.++. + +.+.++++|++|++++|.+.+..+ +.++++|+++++++|.
T Consensus 24 ~~l~~~~~~d~~~---~~~l~~L~~L~l~~~~i~~-l-~~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~ 96 (227)
T d1h6ua2 24 IAAGKSNVTDTVT---QADLDGITTLSAFGTGVTT-I-EGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNP 96 (227)
T ss_dssp HHTTCSSTTSEEC---HHHHHTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCC
T ss_pred HHhCCCCcCCcCC---HHHcCCcCEEECCCCCCCc-c-hhHhcCCCCcEeecCCceeecccc--cccccccccccccccc
Confidence 3444455543322 3445566666666666652 3 235566666666666666554332 5566666666666665
Q ss_pred CCccCchhccCCCCCCEEEccccccccccCccccCCCCCCEEEccCCcCcccCcccccCCCCCCEEEccCCCCCCccchh
Q 041016 195 IQGQIPAEIGNLTNLHKLSLRQNKFSGGIPLSLLQLRKLETLDLQRNSLSGEIPEDIGTLANITILALSNNALTGAIPQS 274 (757)
Q Consensus 195 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~ 274 (757)
++. + ..+.++++|++++++++...+. ..+...+.++.+.++.+.+... ..+..+++|++|++++|.+.+.. .
T Consensus 97 ~~~-i-~~l~~l~~L~~l~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~n~~~~~~--~ 168 (227)
T d1h6ua2 97 LKN-V-SAIAGLQSIKTLDLTSTQITDV--TPLAGLSNLQVLYLDLNQITNI--SPLAGLTNLQYLSIGNAQVSDLT--P 168 (227)
T ss_dssp CSC-C-GGGTTCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCCEEECCSSCCCCCG--G
T ss_pred ccc-c-cccccccccccccccccccccc--chhccccchhhhhchhhhhchh--hhhccccccccccccccccccch--h
Confidence 542 2 2355666666666666655432 2244455666666666555432 23455566666666666555322 2
Q ss_pred hhcCCCCCEEEccCCccccccchhhhccCCCcEEEccCCCCc
Q 041016 275 IRNMTKLVTLRLDSNVLSGEISTWLFDLQGMKSLYLGGNKLK 316 (757)
Q Consensus 275 l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 316 (757)
++++++|++|++++|++++. + .+..+++|++|++++|+++
T Consensus 169 l~~l~~L~~L~Ls~n~l~~l-~-~l~~l~~L~~L~Ls~N~lt 208 (227)
T d1h6ua2 169 LANLSKLTTLKADDNKISDI-S-PLASLPNLIEVHLKNNQIS 208 (227)
T ss_dssp GTTCTTCCEEECCSSCCCCC-G-GGGGCTTCCEEECTTSCCC
T ss_pred hcccccceecccCCCccCCC-h-hhcCCCCCCEEECcCCcCC
Confidence 55566666666666665532 2 2555566666666665554
No 16
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.72 E-value=7.9e-17 Score=156.06 Aligned_cols=191 Identities=25% Similarity=0.351 Sum_probs=158.7
Q ss_pred cccCCCCCCEEeCCCCCCCCCCCccccCCCCCCCEEeCCCCcCCCCcCccccCCCCCCEEEccCCcCCCcccccccCCCC
Q 041016 105 PIFRIRSLMTLDLSYNSMQGEVPGTGFANLTRLTYLDLKDNNLNGSIPSQLFNLRYLEFLDLSANAIEGKLSSRVAGLKN 184 (757)
Q Consensus 105 ~l~~l~~L~~L~Ls~n~l~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 184 (757)
.+..+.+|+.|++.+|.++ .++ .+.++++|++|++++|.+++..| +.++++|+++++++|.++.. ..+.++++
T Consensus 36 ~~~~l~~L~~L~l~~~~i~-~l~--~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~~i--~~l~~l~~ 108 (227)
T d1h6ua2 36 TQADLDGITTLSAFGTGVT-TIE--GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQS 108 (227)
T ss_dssp CHHHHHTCCEEECTTSCCC-CCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTT
T ss_pred CHHHcCCcCEEECCCCCCC-cch--hHhcCCCCcEeecCCceeecccc--cccccccccccccccccccc--cccccccc
Confidence 3456788999999999997 453 48899999999999999986543 89999999999999988753 45889999
Q ss_pred CCEEEccCccCCccCchhccCCCCCCEEEccccccccccCccccCCCCCCEEEccCCcCcccCcccccCCCCCCEEEccC
Q 041016 185 LKQLILDDNLIQGQIPAEIGNLTNLHKLSLRQNKFSGGIPLSLLQLRKLETLDLQRNSLSGEIPEDIGTLANITILALSN 264 (757)
Q Consensus 185 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~ 264 (757)
|+.++++++...+. ..+...+.++.+.++.+.+.... .+.++++|++|++++|.++.. ..+.++++|++|++++
T Consensus 109 L~~l~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~n~~~~~--~~l~~l~~L~~L~Ls~ 182 (227)
T d1h6ua2 109 IKTLDLTSTQITDV--TPLAGLSNLQVLYLDLNQITNIS--PLAGLTNLQYLSIGNAQVSDL--TPLANLSKLTTLKADD 182 (227)
T ss_dssp CCEEECTTSCCCCC--GGGTTCTTCCEEECCSSCCCCCG--GGGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCS
T ss_pred cccccccccccccc--chhccccchhhhhchhhhhchhh--hhccccccccccccccccccc--hhhcccccceecccCC
Confidence 99999999987643 34777889999999999887433 477889999999999998754 3488999999999999
Q ss_pred CCCCCccchhhhcCCCCCEEEccCCccccccchhhhccCCCcEEEccC
Q 041016 265 NALTGAIPQSIRNMTKLVTLRLDSNVLSGEISTWLFDLQGMKSLYLGG 312 (757)
Q Consensus 265 n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~ 312 (757)
|++++. + .++++++|++|++++|++++..+ +.++++|+.|++++
T Consensus 183 n~l~~l-~-~l~~l~~L~~L~Ls~N~lt~i~~--l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 183 NKISDI-S-PLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTN 226 (227)
T ss_dssp SCCCCC-G-GGGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEE
T ss_pred CccCCC-h-hhcCCCCCCEEECcCCcCCCCcc--cccCCCCCEEEeeC
Confidence 999864 3 48899999999999999986433 78999999999863
No 17
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.70 E-value=6.8e-18 Score=158.77 Aligned_cols=112 Identities=29% Similarity=0.346 Sum_probs=86.8
Q ss_pred CCCCEEeCCCCCCCCCCCccccCCCCCCCEEeCCCCcCCCCcCccccCCCCCCEEEccCCcCCCcccccccCCCCCCEEE
Q 041016 110 RSLMTLDLSYNSMQGEVPGTGFANLTRLTYLDLKDNNLNGSIPSQLFNLRYLEFLDLSANAIEGKLSSRVAGLKNLKQLI 189 (757)
Q Consensus 110 ~~L~~L~Ls~n~l~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 189 (757)
+++++|+|++|.|++.++...|.++++|++|+|++|.+....+..+..+++|++|+|++|+++.+.+.+|.++++|++|+
T Consensus 29 ~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~ 108 (192)
T d1w8aa_ 29 LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLN 108 (192)
T ss_dssp TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEE
T ss_pred CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccccccccCHHHHhCCCcccccc
Confidence 57788888888887666657778888888888888888877777777888888888888888877777777777788888
Q ss_pred ccCccCCccCchhccCCCCCCEEEcccccccc
Q 041016 190 LDDNLIQGQIPAEIGNLTNLHKLSLRQNKFSG 221 (757)
Q Consensus 190 L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 221 (757)
|++|++++..+++|..+++|++|+|++|.+..
T Consensus 109 L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~ 140 (192)
T d1w8aa_ 109 LYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp CCSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred cCCccccccCHHHhcCCccccccccccccccc
Confidence 88777777667777777777777777777653
No 18
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.70 E-value=1.3e-16 Score=152.08 Aligned_cols=164 Identities=27% Similarity=0.384 Sum_probs=94.8
Q ss_pred CCCCCEEeCCCCcCCCCcCccccCCCCCCEEEccCCcCCCcccccccCCCCCCEEEccCccCCccCchhccCCCCCCEEE
Q 041016 134 LTRLTYLDLKDNNLNGSIPSQLFNLRYLEFLDLSANAIEGKLSSRVAGLKNLKQLILDDNLIQGQIPAEIGNLTNLHKLS 213 (757)
Q Consensus 134 l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 213 (757)
+.+|++|++++|.++.. + .+..+++|++|++++|++++.. .++.+++|++|++++|++++ +| .+..+++|++|+
T Consensus 45 L~~L~~L~l~~~~i~~l-~-~l~~l~~L~~L~L~~n~i~~l~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~ 118 (210)
T d1h6ta2 45 LNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIK--PLANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLS 118 (210)
T ss_dssp HHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEE
T ss_pred hcCccEEECcCCCCCCc-h-hHhhCCCCCEEeCCCccccCcc--ccccCccccccccccccccc-cc-cccccccccccc
Confidence 44566666666665532 2 2555666666666666665432 24556666666666666653 22 356666666666
Q ss_pred ccccccccccCccccCCCCCCEEEccCCcCcccCcccccCCCCCCEEEccCCCCCCccchhhhcCCCCCEEEccCCcccc
Q 041016 214 LRQNKFSGGIPLSLLQLRKLETLDLQRNSLSGEIPEDIGTLANITILALSNNALTGAIPQSIRNMTKLVTLRLDSNVLSG 293 (757)
Q Consensus 214 L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 293 (757)
+++|.+.. + ..+..+++++.+++++|.+++. ..+..+++|+++++++|++++.. .++++++|++|++++|+++.
T Consensus 119 l~~~~~~~-~-~~l~~l~~l~~l~~~~n~l~~~--~~~~~l~~L~~l~l~~n~l~~i~--~l~~l~~L~~L~Ls~N~i~~ 192 (210)
T d1h6ta2 119 LEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIV--PLAGLTKLQNLYLSKNHISD 192 (210)
T ss_dssp CTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCB
T ss_pred cccccccc-c-cccccccccccccccccccccc--ccccccccccccccccccccccc--cccCCCCCCEEECCCCCCCC
Confidence 66666542 2 2455666666666666666532 34555666666666666666432 25666666666666666653
Q ss_pred ccchhhhccCCCcEEEcc
Q 041016 294 EISTWLFDLQGMKSLYLG 311 (757)
Q Consensus 294 ~~~~~l~~l~~L~~L~L~ 311 (757)
++ .+.++++|++|+++
T Consensus 193 -l~-~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 193 -LR-ALAGLKNLDVLELF 208 (210)
T ss_dssp -CG-GGTTCTTCSEEEEE
T ss_pred -Ch-hhcCCCCCCEEEcc
Confidence 33 36666666666665
No 19
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.70 E-value=2e-16 Score=150.73 Aligned_cols=177 Identities=24% Similarity=0.315 Sum_probs=134.5
Q ss_pred CCccccCCCchhhhcccEEEccCCccccccchhccCCCCCCEEeCcCCcccCcchhhccCCCCCCEEEccCCcCccccCc
Q 041016 478 SNRFSGEVPSSFGVTILMLSLSENKFSGQLPQNLSNLSLLQHLDLHDNNLTGEFPAFLSQLSSLQVLNLRNTALEGSITD 557 (757)
Q Consensus 478 ~n~l~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~ 557 (757)
.+.+++.++..-...++.|++++|.++... .+..+++|++|++++|++++..+ ++.+++|++|++++|++++ ++
T Consensus 33 ~~~~~~~~~~~~L~~L~~L~l~~~~i~~l~--~l~~l~~L~~L~L~~n~i~~l~~--~~~l~~L~~L~l~~n~i~~-l~- 106 (210)
T d1h6ta2 33 KKSVTDAVTQNELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS- 106 (210)
T ss_dssp CSCTTSEECHHHHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-
T ss_pred cCccCCccCHHHhcCccEEECcCCCCCCch--hHhhCCCCCEEeCCCccccCccc--cccCccccccccccccccc-cc-
Confidence 334444433333334677777777776542 47889999999999999986443 6789999999999999985 33
Q ss_pred ccCCCCCCCEEECcCCcccccCCcccccccccccCCCCCCCCCcccCCccccceeEeeeccCccccccccccccCeEECc
Q 041016 558 GLSNLTSLQILDLSNNNLLGKIPSSFGNLQGMIDTPSILPTLPEIFSFPVEIQDLIVNWKNSKRGLSSKSLAIYSLMDLS 637 (757)
Q Consensus 558 ~l~~l~~L~~L~ls~n~l~~~~p~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~L~Ls 637 (757)
.+..+++|+.|++++|.+... ..+.. ++.++.++++
T Consensus 107 ~l~~l~~L~~L~l~~~~~~~~--~~l~~------------------------------------------l~~l~~l~~~ 142 (210)
T d1h6ta2 107 SLKDLKKLKSLSLEHNGISDI--NGLVH------------------------------------------LPQLESLYLG 142 (210)
T ss_dssp GGTTCTTCCEEECTTSCCCCC--GGGGG------------------------------------------CTTCCEEECC
T ss_pred ccccccccccccccccccccc--ccccc------------------------------------------cccccccccc
Confidence 588899999999999987531 22332 3445889999
Q ss_pred CCCCCCcCCccccCCCCCCEEeCCCCCCCccCCcchhCCCCCCEEeCCCCcCccCCCCCccCCCCCCEEeCCC
Q 041016 638 NNQLSGEIPSSLGSLKGLKSLNLSYNQLQGNIPSTFGNLEILETLDLSHNSLSGKIPQTFAKLQQLTSLYLSN 710 (757)
Q Consensus 638 ~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~ 710 (757)
+|.+++ +..+..+++|+++++++|++++.. .+.++++|++|++++|+++. +| .+..+++|++|+|++
T Consensus 143 ~n~l~~--~~~~~~l~~L~~l~l~~n~l~~i~--~l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 143 NNKITD--ITVLSRLTKLDTLSLEDNQISDIV--PLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFS 209 (210)
T ss_dssp SSCCCC--CGGGGGCTTCSEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEE
T ss_pred cccccc--cccccccccccccccccccccccc--cccCCCCCCEEECCCCCCCC-Ch-hhcCCCCCCEEEccC
Confidence 999874 345778999999999999998653 38899999999999999985 44 589999999999874
No 20
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.70 E-value=2.3e-16 Score=148.98 Aligned_cols=162 Identities=28% Similarity=0.405 Sum_probs=88.2
Q ss_pred CCCCCCEEeCCCCcCCCCcCccccCCCCCCEEEccCCcCCCcccccccCCCCCCEEEccCccCCccCchhccCCCCCCEE
Q 041016 133 NLTRLTYLDLKDNNLNGSIPSQLFNLRYLEFLDLSANAIEGKLSSRVAGLKNLKQLILDDNLIQGQIPAEIGNLTNLHKL 212 (757)
Q Consensus 133 ~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 212 (757)
.++++++|++++|.++. + +.+..+++|++|++++|++++..+ ++++++|++|++++|.+.. ++ .++++++|++|
T Consensus 38 ~l~~l~~L~l~~~~i~~-l-~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~-~~-~l~~l~~L~~L 111 (199)
T d2omxa2 38 DLDQVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD-IT-PLANLTNLTGL 111 (199)
T ss_dssp HHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEE
T ss_pred HhcCCCEEECCCCCCCC-c-cccccCCCcCcCccccccccCccc--ccCCccccccccccccccc-cc-ccccccccccc
Confidence 34555556666655552 2 235555566666666665554332 5555666666666655542 22 35556666666
Q ss_pred EccccccccccCccccCCCCCCEEEccCCcCcccCcccccCCCCCCEEEccCCCCCCccchhhhcCCCCCEEEccCCccc
Q 041016 213 SLRQNKFSGGIPLSLLQLRKLETLDLQRNSLSGEIPEDIGTLANITILALSNNALTGAIPQSIRNMTKLVTLRLDSNVLS 292 (757)
Q Consensus 213 ~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 292 (757)
++++|..... ..+..+++|+.|++++|++... +.+..+++|+.|++.+|++++. +.++++++|++|++++|+++
T Consensus 112 ~l~~~~~~~~--~~~~~l~~L~~L~l~~n~l~~~--~~l~~~~~L~~L~l~~n~l~~l--~~l~~l~~L~~L~ls~N~i~ 185 (199)
T d2omxa2 112 TLFNNQITDI--DPLKNLTNLNRLELSSNTISDI--SALSGLTSLQQLNFSSNQVTDL--KPLANLTTLERLDISSNKVS 185 (199)
T ss_dssp ECCSSCCCCC--GGGTTCTTCSEEECCSSCCCCC--GGGTTCTTCSEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCC
T ss_pred cccccccccc--cccchhhhhHHhhhhhhhhccc--ccccccccccccccccccccCC--ccccCCCCCCEEECCCCCCC
Confidence 6666655432 2355566666666666665422 2455566666666666666543 23556666666666666655
Q ss_pred cccchhhhccCCCcEE
Q 041016 293 GEISTWLFDLQGMKSL 308 (757)
Q Consensus 293 ~~~~~~l~~l~~L~~L 308 (757)
+ ++ .+..+++|++|
T Consensus 186 ~-i~-~l~~L~~L~~L 199 (199)
T d2omxa2 186 D-IS-VLAKLTNLESL 199 (199)
T ss_dssp C-CG-GGGGCTTCSEE
T ss_pred C-Cc-cccCCCCCCcC
Confidence 3 22 35556666554
No 21
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=1.1e-16 Score=156.97 Aligned_cols=183 Identities=17% Similarity=0.099 Sum_probs=79.2
Q ss_pred CCCEEeCCCCcCCCCcCccccCCCCCCEEEccCCcCCCc-ccccccCCCCCCEEEccC-ccCCccCchhccCCCCCCEEE
Q 041016 136 RLTYLDLKDNNLNGSIPSQLFNLRYLEFLDLSANAIEGK-LSSRVAGLKNLKQLILDD-NLIQGQIPAEIGNLTNLHKLS 213 (757)
Q Consensus 136 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~ 213 (757)
++++|++++|.++...+.+|.++++|++|++++|.+... .+..|.++++++++.+.. |.+....+..|.++++|++++
T Consensus 30 ~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~ 109 (242)
T d1xwdc1 30 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLL 109 (242)
T ss_dssp CCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEEE
T ss_pred CCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccccccccccccccccccccccc
Confidence 444555555544422223344455555555555544332 223344455555554432 334444444455555555555
Q ss_pred ccccccccccCc-cccCCCCCCEEEccCCcCcccCcccccCCC-CCCEEEccCCCCCCccchhhhcCCCCCEE-EccCCc
Q 041016 214 LRQNKFSGGIPL-SLLQLRKLETLDLQRNSLSGEIPEDIGTLA-NITILALSNNALTGAIPQSIRNMTKLVTL-RLDSNV 290 (757)
Q Consensus 214 L~~n~l~~~~~~-~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~-~L~~L~L~~n~l~~~~~~~l~~l~~L~~L-~L~~n~ 290 (757)
+++|.+....+. .+..+..+..+...++.+....+..+..++ .++.|++++|+++...+.. .+..+++++ .+.+|.
T Consensus 110 l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i~~~~-~~~~~l~~~~~l~~n~ 188 (242)
T d1xwdc1 110 ISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCA-FNGTQLDELNLSDNNN 188 (242)
T ss_dssp EESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTT-TTTCCEEEEECTTCTT
T ss_pred cchhhhcccccccccccccccccccccccccccccccccccccccceeeeccccccccccccc-ccchhhhccccccccc
Confidence 555554422111 122233333333444444433333333332 4555555555555322222 222333333 234444
Q ss_pred cccccchhhhccCCCcEEEccCCCCcCCC
Q 041016 291 LSGEISTWLFDLQGMKSLYLGGNKLKWND 319 (757)
Q Consensus 291 l~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 319 (757)
++...+..|.++++|++|++++|+++.++
T Consensus 189 l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~ 217 (242)
T d1xwdc1 189 LEELPNDVFHGASGPVILDISRTRIHSLP 217 (242)
T ss_dssp CCCCCTTTTTTSCCCSEEECTTSCCCCCC
T ss_pred cccccHHHhcCCCCCCEEECCCCcCCccC
Confidence 44333333455555555555555555333
No 22
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=7.8e-17 Score=157.95 Aligned_cols=216 Identities=17% Similarity=0.178 Sum_probs=134.9
Q ss_pred CEEeCCCCcCCCCcCccccCCCCCCEEEccCCcCCCcccccccCCCCCCEEEccCccCCccC-chhccCCCCCCEEEccc
Q 041016 138 TYLDLKDNNLNGSIPSQLFNLRYLEFLDLSANAIEGKLSSRVAGLKNLKQLILDDNLIQGQI-PAEIGNLTNLHKLSLRQ 216 (757)
Q Consensus 138 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~L~~ 216 (757)
+.++.++..++ .+|..+. +++++|++++|+++.+.+..|.++++|++|++++|.+...+ +..|.++++++++.+..
T Consensus 11 ~~i~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~ 87 (242)
T d1xwdc1 11 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 87 (242)
T ss_dssp SEEEEESCSCS-SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred CEEEEeCCCCC-CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccc
Confidence 56777777777 6666553 57899999999988777777888889999999888876543 45678888888888764
Q ss_pred -cccccccCccccCCCCCCEEEccCCcCcccCcc-cccCCCCCCEEEccCCCCCCccchhhhcCC-CCCEEEccCCcccc
Q 041016 217 -NKFSGGIPLSLLQLRKLETLDLQRNSLSGEIPE-DIGTLANITILALSNNALTGAIPQSIRNMT-KLVTLRLDSNVLSG 293 (757)
Q Consensus 217 -n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~-~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~-~L~~L~L~~n~l~~ 293 (757)
|.+....+..|.++++|+++++++|.+....+. .+..+..+..+...++.+....+..+..++ .++.+++++|+++.
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~ 167 (242)
T d1xwdc1 88 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 167 (242)
T ss_dssp CTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred cccccccccccccccccccccccchhhhcccccccccccccccccccccccccccccccccccccccceeeecccccccc
Confidence 566666677788888888888888877643221 233444555555555566544445555443 56666666666653
Q ss_pred ccchhhhccCCCcEE-EccCCCCcCCCcccccCCcccceeecCCccCccCcchhccCCCCCCEEEccCCcccCccccccc
Q 041016 294 EISTWLFDLQGMKSL-YLGGNKLKWNDNVSIVPKCMLTELSLRSCSVRGSIPLWLSTQTELTFLDLSENELEGTYPQWLS 372 (757)
Q Consensus 294 ~~~~~l~~l~~L~~L-~L~~n~l~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~ 372 (757)
..+. .....+++++ ++++|.++ ...+..|.++++|++|++++|+++...+..+.
T Consensus 168 i~~~-~~~~~~l~~~~~l~~n~l~------------------------~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~ 222 (242)
T d1xwdc1 168 IHNC-AFNGTQLDELNLSDNNNLE------------------------ELPNDVFHGASGPVILDISRTRIHSLPSYGLE 222 (242)
T ss_dssp ECTT-TTTTCCEEEEECTTCTTCC------------------------CCCTTTTTTSCCCSEEECTTSCCCCCCSSSCT
T ss_pred cccc-cccchhhhccccccccccc------------------------cccHHHhcCCCCCCEEECCCCcCCccCHHHHc
Confidence 3322 2333343333 33444444 33333456666677777766666644444444
Q ss_pred Ccc-ccEEEc
Q 041016 373 ELN-LGTVIL 381 (757)
Q Consensus 373 ~~~-L~~L~l 381 (757)
.+. |+.+++
T Consensus 223 ~l~~L~~l~~ 232 (242)
T d1xwdc1 223 NLKKLRARST 232 (242)
T ss_dssp TCCEEESSSE
T ss_pred CCcccccCcC
Confidence 443 444333
No 23
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.69 E-value=4.2e-16 Score=147.18 Aligned_cols=163 Identities=28% Similarity=0.389 Sum_probs=135.9
Q ss_pred cCCCCCCEEeCCCCCCCCCCCccccCCCCCCCEEeCCCCcCCCCcCccccCCCCCCEEEccCCcCCCcccccccCCCCCC
Q 041016 107 FRIRSLMTLDLSYNSMQGEVPGTGFANLTRLTYLDLKDNNLNGSIPSQLFNLRYLEFLDLSANAIEGKLSSRVAGLKNLK 186 (757)
Q Consensus 107 ~~l~~L~~L~Ls~n~l~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 186 (757)
..++++++|++++|.++ .+ ..++.+++|++|++++|.+++..| ++++++|++|++++|.+.... .+.++++|+
T Consensus 37 ~~l~~l~~L~l~~~~i~-~l--~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~~~--~l~~l~~L~ 109 (199)
T d2omxa2 37 TDLDQVTTLQADRLGIK-SI--DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADIT--PLANLTNLT 109 (199)
T ss_dssp HHHTTCCEEECTTSCCC-CC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCG--GGTTCTTCS
T ss_pred HHhcCCCEEECCCCCCC-Cc--cccccCCCcCcCccccccccCccc--ccCCccccccccccccccccc--ccccccccc
Confidence 35678899999999987 44 347889999999999999985433 899999999999999887543 488999999
Q ss_pred EEEccCccCCccCchhccCCCCCCEEEccccccccccCccccCCCCCCEEEccCCcCcccCcccccCCCCCCEEEccCCC
Q 041016 187 QLILDDNLIQGQIPAEIGNLTNLHKLSLRQNKFSGGIPLSLLQLRKLETLDLQRNSLSGEIPEDIGTLANITILALSNNA 266 (757)
Q Consensus 187 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~ 266 (757)
.|++++|.+... ..+..+++|++|++++|++.. + ..+..+++|++|++.+|++++. ..++++++|++|++++|+
T Consensus 110 ~L~l~~~~~~~~--~~~~~l~~L~~L~l~~n~l~~-~-~~l~~~~~L~~L~l~~n~l~~l--~~l~~l~~L~~L~ls~N~ 183 (199)
T d2omxa2 110 GLTLFNNQITDI--DPLKNLTNLNRLELSSNTISD-I-SALSGLTSLQQLNFSSNQVTDL--KPLANLTTLERLDISSNK 183 (199)
T ss_dssp EEECCSSCCCCC--GGGTTCTTCSEEECCSSCCCC-C-GGGTTCTTCSEEECCSSCCCCC--GGGTTCTTCCEEECCSSC
T ss_pred cccccccccccc--cccchhhhhHHhhhhhhhhcc-c-ccccccccccccccccccccCC--ccccCCCCCCEEECCCCC
Confidence 999999988743 458889999999999999873 3 3588899999999999999864 348899999999999999
Q ss_pred CCCccchhhhcCCCCCEE
Q 041016 267 LTGAIPQSIRNMTKLVTL 284 (757)
Q Consensus 267 l~~~~~~~l~~l~~L~~L 284 (757)
+++. +.++++++|++|
T Consensus 184 i~~i--~~l~~L~~L~~L 199 (199)
T d2omxa2 184 VSDI--SVLAKLTNLESL 199 (199)
T ss_dssp CCCC--GGGGGCTTCSEE
T ss_pred CCCC--ccccCCCCCCcC
Confidence 9853 358889999876
No 24
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.68 E-value=5.2e-17 Score=152.59 Aligned_cols=156 Identities=23% Similarity=0.279 Sum_probs=93.2
Q ss_pred CEEeCcCCcccCcchhhccCCCCCCEEEccCCcCcccc-CcccCCCCCCCEEECcCCcccccCCcccccccccccCCCCC
Q 041016 518 QHLDLHDNNLTGEFPAFLSQLSSLQVLNLRNTALEGSI-TDGLSNLTSLQILDLSNNNLLGKIPSSFGNLQGMIDTPSIL 596 (757)
Q Consensus 518 ~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~-~~~l~~l~~L~~L~ls~n~l~~~~p~~~~~l~~l~~~~~~~ 596 (757)
+.++.++++++ .+|..+. +++++|+|++|++++.+ +..|..+++|++|++++|++.+..+..|..++.|
T Consensus 11 ~~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L------- 80 (192)
T d1w8aa_ 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHI------- 80 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTC-------
T ss_pred CEEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeecccccccccccccccccccc-------
Confidence 35566666665 4444332 45666666666665433 4455666666666666666665555555544433
Q ss_pred CCCCcccCCccccceeEeeeccCccccccccccccCeEECcCCCCCCcCCccccCCCCCCEEeCCCCCCCccCCcchhCC
Q 041016 597 PTLPEIFSFPVEIQDLIVNWKNSKRGLSSKSLAIYSLMDLSNNQLSGEIPSSLGSLKGLKSLNLSYNQLQGNIPSTFGNL 676 (757)
Q Consensus 597 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l 676 (757)
+.|+|++|++++..|..|.++++|++|+|++|+|++..|++|..+
T Consensus 81 -----------------------------------~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l 125 (192)
T d1w8aa_ 81 -----------------------------------QELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHL 125 (192)
T ss_dssp -----------------------------------CEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTC
T ss_pred -----------------------------------ceeeeccccccccCHHHHhCCCcccccccCCccccccCHHHhcCC
Confidence 666666666666666666777777777777777776666677777
Q ss_pred CCCCEEeCCCCcCccCCCCCccCCCCCCEEeCCCCcceecCCC
Q 041016 677 EILETLDLSHNSLSGKIPQTFAKLQQLTSLYLSNNKLSGRIPE 719 (757)
Q Consensus 677 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~g~iP~ 719 (757)
++|++|+|++|.+....+.. .-...++.+.+..|.+.+..|.
T Consensus 126 ~~L~~l~L~~N~~~~~~~~~-~~~~~l~~~~l~~~~~~c~~p~ 167 (192)
T d1w8aa_ 126 NSLTSLNLASNPFNCNCHLA-WFAEWLRKKSLNGGAARCGAPS 167 (192)
T ss_dssp TTCCEEECTTCCBCCSGGGH-HHHHHHHHHCCSGGGCBBCSST
T ss_pred cccccccccccccccccchH-HHhhhhhhhcccCCCeEeCCCh
Confidence 77777777777665433211 1112345556666666665554
No 25
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=1.9e-15 Score=151.12 Aligned_cols=58 Identities=24% Similarity=0.311 Sum_probs=24.9
Q ss_pred CCCCEEEccCCcCCCc-ccccccCCCCCCEEEccCccCCccCchhccCCCCCCEEEccc
Q 041016 159 RYLEFLDLSANAIEGK-LSSRVAGLKNLKQLILDDNLIQGQIPAEIGNLTNLHKLSLRQ 216 (757)
Q Consensus 159 ~~L~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 216 (757)
.+|++||++++.+... +...+.++++|++|+++++.+++..+..++.+++|++|++++
T Consensus 46 ~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~ 104 (284)
T d2astb2 46 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSG 104 (284)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTT
T ss_pred CCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccc
Confidence 3444444444443322 122234444444444444444444444444444444444444
No 26
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54 E-value=3.6e-15 Score=149.15 Aligned_cols=176 Identities=23% Similarity=0.223 Sum_probs=91.4
Q ss_pred CCCCEEeCcCcccccc-CCcccCCCCCccEEEccCCcccccChHhhhccCCCCEEEccCCc-cccc-CC-CCCCCCcccE
Q 041016 398 RNLSVLVLSRNNFSGE-LPETIGQSTSVMVLMLSSNNFSGHVPKSISNIYRLLVLDLSNNS-FSGE-FP-AFGSDSLVGH 473 (757)
Q Consensus 398 ~~L~~L~L~~n~l~~~-~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ls~n~-l~~~-~~-~~~~~~~L~~ 473 (757)
.+|++|+++++.+++. +...+..+++|++|++++|.+++..+..+..+++|++|++++|. ++.. +. ....+++|++
T Consensus 46 ~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~ 125 (284)
T d2astb2 46 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 125 (284)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccc
Confidence 4555566655555432 22334455566666666665555555555555666666665542 2211 11 1234455555
Q ss_pred EECcCCc-cccCC-Cchh---hhcccEEEccCCc--cccc-cchhccCCCCCCEEeCcCC-cccCcchhhccCCCCCCEE
Q 041016 474 VDISSNR-FSGEV-PSSF---GVTILMLSLSENK--FSGQ-LPQNLSNLSLLQHLDLHDN-NLTGEFPAFLSQLSSLQVL 544 (757)
Q Consensus 474 L~l~~n~-l~~~~-~~~~---~~~l~~L~l~~n~--l~~~-~~~~~~~l~~L~~L~Ls~n-~l~~~~~~~l~~l~~L~~L 544 (757)
|++++|. ++... ...+ ...++.|+++++. ++.. +...+.++++|++|++++| .+++.....+..+++|++|
T Consensus 126 L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L 205 (284)
T d2astb2 126 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHL 205 (284)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEE
T ss_pred cccccccccccccchhhhcccccccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccCcCCEE
Confidence 5655542 22110 0011 1224555555432 2221 2233455677777777765 3555556666667777777
Q ss_pred EccCC-cCccccCcccCCCCCCCEEECcCC
Q 041016 545 NLRNT-ALEGSITDGLSNLTSLQILDLSNN 573 (757)
Q Consensus 545 ~Ls~n-~l~~~~~~~l~~l~~L~~L~ls~n 573 (757)
++++| .+++.....++++++|++|++++|
T Consensus 206 ~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 206 SLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp ECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred ECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 77775 455545555666777777777665
No 27
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=1.2e-14 Score=131.29 Aligned_cols=111 Identities=22% Similarity=0.192 Sum_probs=63.4
Q ss_pred ccCCCCCCEEeCCCCCCCCCCCccccCCCCCCCEEeCCCCcCCCCcCccccCCCCCCEEEccCCcCCCcccccccCCCCC
Q 041016 106 IFRIRSLMTLDLSYNSMQGEVPGTGFANLTRLTYLDLKDNNLNGSIPSQLFNLRYLEFLDLSANAIEGKLSSRVAGLKNL 185 (757)
Q Consensus 106 l~~l~~L~~L~Ls~n~l~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 185 (757)
+.+...+++|||++|+++ .++ ..+..+++|++|+|++|.++ .++ .+..+++|++|++++|+++...+..+..+++|
T Consensus 14 ~~n~~~lr~L~L~~n~I~-~i~-~~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L 89 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIP-VIE-NLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 89 (162)
T ss_dssp EECTTSCEEEECTTSCCC-SCC-CGGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred ccCcCcCcEEECCCCCCC-ccC-ccccccccCCEEECCCCCCC-ccC-CcccCcchhhhhcccccccCCCcccccccccc
Confidence 445556666666666665 444 44455666666666666666 332 35666666666666666665444445556666
Q ss_pred CEEEccCccCCccCc-hhccCCCCCCEEEccccccc
Q 041016 186 KQLILDDNLIQGQIP-AEIGNLTNLHKLSLRQNKFS 220 (757)
Q Consensus 186 ~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~n~l~ 220 (757)
++|++++|+++.... ..+..+++|++|++++|.++
T Consensus 90 ~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~ 125 (162)
T d1a9na_ 90 TELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT 125 (162)
T ss_dssp CEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred ccceeccccccccccccccccccccchhhcCCCccc
Confidence 666666666553211 23455555555555555554
No 28
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.51 E-value=3.4e-15 Score=154.43 Aligned_cols=243 Identities=19% Similarity=0.215 Sum_probs=114.7
Q ss_pred cccccCCCCCCEEeCCCCCCCCC----CCccccCCCCCCCEEeCCCCcCCCC----------cCccccCCCCCCEEEccC
Q 041016 103 LAPIFRIRSLMTLDLSYNSMQGE----VPGTGFANLTRLTYLDLKDNNLNGS----------IPSQLFNLRYLEFLDLSA 168 (757)
Q Consensus 103 ~~~l~~l~~L~~L~Ls~n~l~~~----i~~~~~~~l~~L~~L~Ls~n~l~~~----------~p~~l~~l~~L~~L~Ls~ 168 (757)
..++...+.|++|+|++|.+... +. ..+...++|+.|+++++..... +...+..+++|++|+|++
T Consensus 24 ~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~-~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~ 102 (344)
T d2ca6a1 24 FAVLLEDDSVKEIVLSGNTIGTEAARWLS-ENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 102 (344)
T ss_dssp SHHHHHCSCCCEEECTTSEECHHHHHHHH-HTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHhhCCCCCEEECcCCcCCHHHHHHHH-HHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccc
Confidence 34456677777788777766432 11 3456667777777776654311 112344566666666666
Q ss_pred CcCCCcc----cccccCCCCCCEEEccCccCCccCchh-------------ccCCCCCCEEEccccccccc----cCccc
Q 041016 169 NAIEGKL----SSRVAGLKNLKQLILDDNLIQGQIPAE-------------IGNLTNLHKLSLRQNKFSGG----IPLSL 227 (757)
Q Consensus 169 n~l~~~~----~~~~~~l~~L~~L~L~~n~l~~~~p~~-------------~~~l~~L~~L~L~~n~l~~~----~~~~l 227 (757)
|.+.... ...+...++|++|++++|.+....... ....+.|+.+++++|.+... +...+
T Consensus 103 n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l 182 (344)
T d2ca6a1 103 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTF 182 (344)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHH
T ss_pred cccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchh
Confidence 6665432 222344566666666666543211111 12334455555555544321 11122
Q ss_pred cCCCCCCEEEccCCcCcccCcccccCCCCCCEEEccCCCCCCccchhhhcCCCCCEEEccCCccccc----cchhhhccC
Q 041016 228 LQLRKLETLDLQRNSLSGEIPEDIGTLANITILALSNNALTGAIPQSIRNMTKLVTLRLDSNVLSGE----ISTWLFDLQ 303 (757)
Q Consensus 228 ~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~----~~~~l~~l~ 303 (757)
...+.|++|++++|.++..... ..+...+..+++|++|++++|.++.. +...+..++
T Consensus 183 ~~~~~L~~L~L~~n~i~~~g~~-------------------~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~ 243 (344)
T d2ca6a1 183 QSHRLLHTVKMVQNGIRPEGIE-------------------HLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWP 243 (344)
T ss_dssp HHCTTCCEEECCSSCCCHHHHH-------------------HHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCT
T ss_pred hhhhhhcccccccccccccccc-------------------cchhhhhcchhhhcccccccccccccccccccccccccc
Confidence 3344455555555544321000 00112233444444455544444321 122233444
Q ss_pred CCcEEEccCCCCcCCCcccc------cCCcccceeecCCccCccC----cchhcc-CCCCCCEEEccCCcccC
Q 041016 304 GMKSLYLGGNKLKWNDNVSI------VPKCMLTELSLRSCSVRGS----IPLWLS-TQTELTFLDLSENELEG 365 (757)
Q Consensus 304 ~L~~L~L~~n~l~~~~~~~~------~~~~~L~~L~L~~~~~~~~----~~~~l~-~~~~L~~L~l~~n~l~~ 365 (757)
+|++|++++|.++......+ .....|++|++++|.+... +...+. ++++|++|++++|++..
T Consensus 244 ~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 244 NLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 316 (344)
T ss_dssp TCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred cchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCC
Confidence 45555555554442221111 1123355555555544332 223332 56788888888888764
No 29
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.50 E-value=6.6e-14 Score=119.96 Aligned_cols=102 Identities=31% Similarity=0.397 Sum_probs=69.2
Q ss_pred CEEeCCCCCCCCCCCccccCCCCCCCEEeCCCCcCCCCcCccccCCCCCCEEEccCCcCCCcccccccCCCCCCEEEccC
Q 041016 113 MTLDLSYNSMQGEVPGTGFANLTRLTYLDLKDNNLNGSIPSQLFNLRYLEFLDLSANAIEGKLSSRVAGLKNLKQLILDD 192 (757)
Q Consensus 113 ~~L~Ls~n~l~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 192 (757)
|+|+|++|+++ .++ .++++++|++|++++|.++ .+|+.++.+++|++|++++|.++.. + .+..+++|++|++++
T Consensus 1 R~L~Ls~n~l~-~l~--~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~l-~-~~~~l~~L~~L~l~~ 74 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC--HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENV-D-GVANLPRLQELLLCN 74 (124)
T ss_dssp SEEECTTSCCS-SCC--CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCC-G-GGTTCSSCCEEECCS
T ss_pred CEEEcCCCCCC-CCc--ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccccc-C-ccccccccCeEECCC
Confidence 56778888776 444 3677777788888877777 5666777777777777777777654 2 366677777777777
Q ss_pred ccCCccC-chhccCCCCCCEEEccccccc
Q 041016 193 NLIQGQI-PAEIGNLTNLHKLSLRQNKFS 220 (757)
Q Consensus 193 n~l~~~~-p~~~~~l~~L~~L~L~~n~l~ 220 (757)
|+++... ...+..+++|++|++++|.++
T Consensus 75 N~i~~~~~~~~l~~~~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 75 NRLQQSAAIQPLVSCPRLVLLNLQGNSLC 103 (124)
T ss_dssp SCCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred CccCCCCCchhhcCCCCCCEEECCCCcCC
Confidence 7766432 234566666666666666664
No 30
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49 E-value=2.5e-14 Score=129.15 Aligned_cols=111 Identities=25% Similarity=0.256 Sum_probs=65.4
Q ss_pred cCCCCCCCEEeCCCCcCCCCcCccccCCCCCCEEEccCCcCCCcccccccCCCCCCEEEccCccCCccCchhccCCCCCC
Q 041016 131 FANLTRLTYLDLKDNNLNGSIPSQLFNLRYLEFLDLSANAIEGKLSSRVAGLKNLKQLILDDNLIQGQIPAEIGNLTNLH 210 (757)
Q Consensus 131 ~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 210 (757)
|.++.++++|+|++|+|+ .++..+..+++|++|+|++|.++.. +.|..+++|++|++++|.++...+..+..+++|+
T Consensus 14 ~~n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~~l--~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~ 90 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 90 (162)
T ss_dssp EECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred ccCcCcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCCcc--CCcccCcchhhhhcccccccCCCccccccccccc
Confidence 556667777777777777 4455556677777777777776643 2356666666666666666644444445566666
Q ss_pred EEEccccccccccC-ccccCCCCCCEEEccCCcCc
Q 041016 211 KLSLRQNKFSGGIP-LSLLQLRKLETLDLQRNSLS 244 (757)
Q Consensus 211 ~L~L~~n~l~~~~~-~~l~~l~~L~~L~l~~n~l~ 244 (757)
+|++++|++..... ..+..+++|++|++++|.++
T Consensus 91 ~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~ 125 (162)
T d1a9na_ 91 ELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT 125 (162)
T ss_dssp EEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred cceeccccccccccccccccccccchhhcCCCccc
Confidence 66666666542211 23445555555555555543
No 31
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.46 E-value=1.7e-13 Score=117.33 Aligned_cols=102 Identities=30% Similarity=0.418 Sum_probs=71.3
Q ss_pred CEEeCCCCcCCCCcCccccCCCCCCEEEccCCcCCCcccccccCCCCCCEEEccCccCCccCchhccCCCCCCEEEcccc
Q 041016 138 TYLDLKDNNLNGSIPSQLFNLRYLEFLDLSANAIEGKLSSRVAGLKNLKQLILDDNLIQGQIPAEIGNLTNLHKLSLRQN 217 (757)
Q Consensus 138 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 217 (757)
|+|+|++|+++ .++ .+..+++|++|++++|+++. +|..+..+++|++|++++|.+++ +| .++++++|++|++++|
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~~-lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLRA-LPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCCC-CCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccCc-chhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCC
Confidence 57888888887 444 47778888888888888874 45567777777777777777764 33 4777777777777777
Q ss_pred cccccc-CccccCCCCCCEEEccCCcCc
Q 041016 218 KFSGGI-PLSLLQLRKLETLDLQRNSLS 244 (757)
Q Consensus 218 ~l~~~~-~~~l~~l~~L~~L~l~~n~l~ 244 (757)
++.... ...+..+++|++|++++|.++
T Consensus 76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 76 RLQQSAAIQPLVSCPRLVLLNLQGNSLC 103 (124)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred ccCCCCCchhhcCCCCCCEEECCCCcCC
Confidence 776432 245666677777777777665
No 32
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.44 E-value=3.9e-14 Score=146.29 Aligned_cols=40 Identities=25% Similarity=0.243 Sum_probs=19.1
Q ss_pred cCCCCCCEEEccCCCCCCc----cchhhhcCCCCCEEEccCCcc
Q 041016 252 GTLANITILALSNNALTGA----IPQSIRNMTKLVTLRLDSNVL 291 (757)
Q Consensus 252 ~~l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~L~~n~l 291 (757)
..+++|++|++++|.+... +...+..+++|++|++++|.+
T Consensus 90 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l 133 (344)
T d2ca6a1 90 LKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGL 133 (344)
T ss_dssp TTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCC
T ss_pred hhCCCcccccccccccccccccchhhhhcccccchheecccccc
Confidence 3444555555555554432 222333445555555555554
No 33
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.24 E-value=1.2e-13 Score=129.37 Aligned_cols=144 Identities=26% Similarity=0.317 Sum_probs=98.4
Q ss_pred CCCEEeCcCC--cccCcchhhccCCCCCCEEEccCCcCccccCcccCCCCCCCEEECcCCcccccCCcccccccccccCC
Q 041016 516 LLQHLDLHDN--NLTGEFPAFLSQLSSLQVLNLRNTALEGSITDGLSNLTSLQILDLSNNNLLGKIPSSFGNLQGMIDTP 593 (757)
Q Consensus 516 ~L~~L~Ls~n--~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ls~n~l~~~~p~~~~~l~~l~~~~ 593 (757)
..+.+++.+. .+. .++..+..+++|++|+|++|+++. ++ .+..+++|++|++++|.++ .+|..+..
T Consensus 24 ~~~~~~l~~~~~~i~-~l~~sl~~L~~L~~L~Ls~n~I~~-i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~-------- 91 (198)
T d1m9la_ 24 EAEKVELHGMIPPIE-KMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAV-------- 91 (198)
T ss_dssp TCSCEECCBCCTTCC-CCHHHHHHTTTCCEEECSEEEESC-CC-CHHHHTTCCEEECCEEEEC-SCSSHHHH--------
T ss_pred ccceeeeecccCchh-hhhhHHhcccccceeECcccCCCC-cc-cccCCccccChhhcccccc-cccccccc--------
Confidence 3445555543 232 456667778888888888888774 33 4777888888888888775 33332222
Q ss_pred CCCCCCCcccCCccccceeEeeeccCccccccccccccCeEECcCCCCCCcCCccccCCCCCCEEeCCCCCCCccCC-cc
Q 041016 594 SILPTLPEIFSFPVEIQDLIVNWKNSKRGLSSKSLAIYSLMDLSNNQLSGEIPSSLGSLKGLKSLNLSYNQLQGNIP-ST 672 (757)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~ 672 (757)
++.|+.|++++|+++.. ..+..+++|++|++++|+++.... ..
T Consensus 92 ----------------------------------~~~L~~L~l~~N~i~~l--~~~~~l~~L~~L~L~~N~i~~~~~~~~ 135 (198)
T d1m9la_ 92 ----------------------------------ADTLEELWISYNQIASL--SGIEKLVNLRVLYMSNNKITNWGEIDK 135 (198)
T ss_dssp ----------------------------------HHHCCEEECSEEECCCH--HHHHHHHHSSEEEESEEECCCHHHHHH
T ss_pred ----------------------------------ccccccccccccccccc--ccccccccccccccccchhcccccccc
Confidence 23447888888888743 347778888888888888875432 46
Q ss_pred hhCCCCCCEEeCCCCcCccCCCCC----------ccCCCCCCEEe
Q 041016 673 FGNLEILETLDLSHNSLSGKIPQT----------FAKLQQLTSLY 707 (757)
Q Consensus 673 ~~~l~~L~~L~Ls~N~l~~~~p~~----------l~~l~~L~~L~ 707 (757)
|..+++|+.|++++|++....+.. +..+++|+.||
T Consensus 136 l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~~vi~~lp~L~~LD 180 (198)
T d1m9la_ 136 LAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp HTTTTTCSEEEECSSHHHHHHCTTTTHHHHHHHHHHHCSSCCEES
T ss_pred ccCCCccceeecCCCccccCcccccchhhHHHHHHHHCCCcCEeC
Confidence 788888888888888877654433 55688888887
No 34
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.23 E-value=1.2e-13 Score=129.29 Aligned_cols=10 Identities=30% Similarity=0.265 Sum_probs=4.9
Q ss_pred hccCCCcEEE
Q 041016 300 FDLQGMKSLY 309 (757)
Q Consensus 300 ~~l~~L~~L~ 309 (757)
..+++|+.||
T Consensus 171 ~~lp~L~~LD 180 (198)
T d1m9la_ 171 KRLPNLKKLD 180 (198)
T ss_dssp HHCSSCCEES
T ss_pred HHCCCcCEeC
Confidence 3455555543
No 35
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.22 E-value=1.7e-11 Score=109.36 Aligned_cols=103 Identities=17% Similarity=0.097 Sum_probs=49.6
Q ss_pred EEeCCCCcCCCCcCccccCCCCCCEEEccCC-cCCCcccccccCCCCCCEEEccCccCCccCchhccCCCCCCEEEcccc
Q 041016 139 YLDLKDNNLNGSIPSQLFNLRYLEFLDLSAN-AIEGKLSSRVAGLKNLKQLILDDNLIQGQIPAEIGNLTNLHKLSLRQN 217 (757)
Q Consensus 139 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~n-~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 217 (757)
.++.+++.+. ..|..+..+++|++|++++| .++.+.+.+|.++++|+.|++++|+++.+.+.+|..+++|++|+|++|
T Consensus 12 ~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N 90 (156)
T d2ifga3 12 GLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (156)
T ss_dssp CEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred eEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCC
Confidence 3444444444 33444444555555555433 244444444555555555555555555444555555555555555555
Q ss_pred ccccccCccccCCCCCCEEEccCCcC
Q 041016 218 KFSGGIPLSLLQLRKLETLDLQRNSL 243 (757)
Q Consensus 218 ~l~~~~~~~l~~l~~L~~L~l~~n~l 243 (757)
+++...+..+. ..+|++|++++|.+
T Consensus 91 ~l~~l~~~~~~-~~~l~~L~L~~Np~ 115 (156)
T d2ifga3 91 ALESLSWKTVQ-GLSLQELVLSGNPL 115 (156)
T ss_dssp CCSCCCSTTTC-SCCCCEEECCSSCC
T ss_pred CCcccChhhhc-cccccccccCCCcc
Confidence 55522222222 22455555555554
No 36
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.22 E-value=1.7e-11 Score=109.37 Aligned_cols=106 Identities=16% Similarity=0.094 Sum_probs=74.3
Q ss_pred CCEEeCCCCCCCCCCCccccCCCCCCCEEeCCCC-cCCCCcCccccCCCCCCEEEccCCcCCCcccccccCCCCCCEEEc
Q 041016 112 LMTLDLSYNSMQGEVPGTGFANLTRLTYLDLKDN-NLNGSIPSQLFNLRYLEFLDLSANAIEGKLSSRVAGLKNLKQLIL 190 (757)
Q Consensus 112 L~~L~Ls~n~l~~~i~~~~~~~l~~L~~L~Ls~n-~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 190 (757)
.+.++.+++.+. .+| ..+..+++|++|++++| .++...+.+|.++++|++|+|++|+++.+.+.+|.++++|++|+|
T Consensus 10 ~~~l~c~~~~~~-~~p-~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 87 (156)
T d2ifga3 10 SSGLRCTRDGAL-DSL-HHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNL 87 (156)
T ss_dssp SSCEECCSSCCC-TTT-TTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEEC
T ss_pred CCeEEecCCCCc-cCc-ccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceec
Confidence 344666666665 455 55667777888888655 476555566777888888888888888777777888888888888
Q ss_pred cCccCCccCchhccCCCCCCEEEccccccc
Q 041016 191 DDNLIQGQIPAEIGNLTNLHKLSLRQNKFS 220 (757)
Q Consensus 191 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 220 (757)
++|+++...+..|.. .+|++|+|++|.+.
T Consensus 88 s~N~l~~l~~~~~~~-~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 88 SFNALESLSWKTVQG-LSLQELVLSGNPLH 116 (156)
T ss_dssp CSSCCSCCCSTTTCS-CCCCEEECCSSCCC
T ss_pred cCCCCcccChhhhcc-ccccccccCCCccc
Confidence 888887444444443 46888888888764
No 37
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.39 E-value=6.6e-09 Score=92.92 Aligned_cols=66 Identities=30% Similarity=0.167 Sum_probs=32.0
Q ss_pred ccCCCCCCEEEccCCcCCCcc--cccccCCCCCCEEEccCccCCccCchhccCCCCCCEEEccccccc
Q 041016 155 LFNLRYLEFLDLSANAIEGKL--SSRVAGLKNLKQLILDDNLIQGQIPAEIGNLTNLHKLSLRQNKFS 220 (757)
Q Consensus 155 l~~l~~L~~L~Ls~n~l~~~~--~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 220 (757)
+.++++|++|+|++|+++... +..+..+++|+.|+|++|.++...+-.+....+|++|++++|.+.
T Consensus 61 ~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~ 128 (162)
T d1koha1 61 EENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLS 128 (162)
T ss_dssp HHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTS
T ss_pred HHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcC
Confidence 345556666666666655432 233444555555555555555332222223334555555555554
No 38
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.28 E-value=4.3e-08 Score=87.47 Aligned_cols=80 Identities=30% Similarity=0.198 Sum_probs=55.6
Q ss_pred ccccCeEECcCCCCCCcC--CccccCCCCCCEEeCCCCCCCccCCcchhCCCCCCEEeCCCCcCccCCCCC-------cc
Q 041016 628 LAIYSLMDLSNNQLSGEI--PSSLGSLKGLKSLNLSYNQLQGNIPSTFGNLEILETLDLSHNSLSGKIPQT-------FA 698 (757)
Q Consensus 628 ~~~l~~L~Ls~n~l~~~~--p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-------l~ 698 (757)
++.|+.|+|++|+|+... +..+..+++|+.|+|++|+++...+-.+.....|+.|++++|++....... +.
T Consensus 64 ~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i~~ 143 (162)
T d1koha1 64 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIRE 143 (162)
T ss_dssp CTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHHHT
T ss_pred CCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhHHHHHHH
Confidence 345577777777776542 345677888888888888888654434445567888888888887655432 55
Q ss_pred CCCCCCEEe
Q 041016 699 KLQQLTSLY 707 (757)
Q Consensus 699 ~l~~L~~L~ 707 (757)
.+|+|++||
T Consensus 144 ~~P~L~~LD 152 (162)
T d1koha1 144 RFPKLLRLD 152 (162)
T ss_dssp TSTTCCEET
T ss_pred HCCCCCEEC
Confidence 678888886
No 39
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.71 E-value=1.1e-05 Score=71.71 Aligned_cols=64 Identities=19% Similarity=0.278 Sum_probs=29.2
Q ss_pred CCCCCCEEeCcCC-cccCc----chhhccCCCCCCEEEccCCcCcccc----CcccCCCCCCCEEECcCCccc
Q 041016 513 NLSLLQHLDLHDN-NLTGE----FPAFLSQLSSLQVLNLRNTALEGSI----TDGLSNLTSLQILDLSNNNLL 576 (757)
Q Consensus 513 ~l~~L~~L~Ls~n-~l~~~----~~~~l~~l~~L~~L~Ls~n~l~~~~----~~~l~~l~~L~~L~ls~n~l~ 576 (757)
+.++|++|+|+++ .+... +...+...+.|++|+|++|.+.... .+.+...+.|++|++++|.++
T Consensus 13 n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~ 85 (167)
T d1pgva_ 13 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 85 (167)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred CCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcc
Confidence 4466666666653 34321 2223444455555555555554211 122333444555555554443
No 40
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.56 E-value=4e-05 Score=67.94 Aligned_cols=64 Identities=17% Similarity=0.221 Sum_probs=28.8
Q ss_pred CCCCCCEEEccCc-cCCcc----CchhccCCCCCCEEEccccccccccC----ccccCCCCCCEEEccCCcCc
Q 041016 181 GLKNLKQLILDDN-LIQGQ----IPAEIGNLTNLHKLSLRQNKFSGGIP----LSLLQLRKLETLDLQRNSLS 244 (757)
Q Consensus 181 ~l~~L~~L~L~~n-~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~~~----~~l~~l~~L~~L~l~~n~l~ 244 (757)
+.++|+.|+|+++ .+... +-..+...++|++|+|++|.+..... ..+...+.|++|++++|.++
T Consensus 13 n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~ 85 (167)
T d1pgva_ 13 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 85 (167)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred CCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcc
Confidence 4456666666653 23321 12234445555555555555542211 12223344555555554443
No 41
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=97.19 E-value=4.2e-05 Score=67.78 Aligned_cols=67 Identities=15% Similarity=0.168 Sum_probs=33.0
Q ss_pred hccCCCCCCEEeCcC-CcccCc----chhhccCCCCCCEEEccCCcCccc----cCcccCCCCCCCEEECcCCccc
Q 041016 510 NLSNLSLLQHLDLHD-NNLTGE----FPAFLSQLSSLQVLNLRNTALEGS----ITDGLSNLTSLQILDLSNNNLL 576 (757)
Q Consensus 510 ~~~~l~~L~~L~Ls~-n~l~~~----~~~~l~~l~~L~~L~Ls~n~l~~~----~~~~l~~l~~L~~L~ls~n~l~ 576 (757)
...+.+.|++|++++ +.++.. +..++...+.|++|++++|.+... +...+...++++.+++++|.+.
T Consensus 12 ~~~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~ 87 (166)
T d1io0a_ 12 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 87 (166)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHhcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhcccccc
Confidence 344556677777765 344422 223344455566666666655422 1123334455555555555443
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.87 E-value=0.00052 Score=60.41 Aligned_cols=64 Identities=16% Similarity=0.174 Sum_probs=29.6
Q ss_pred cCCCCCCEEEccC-ccCCcc----CchhccCCCCCCEEEccccccccccC----ccccCCCCCCEEEccCCcC
Q 041016 180 AGLKNLKQLILDD-NLIQGQ----IPAEIGNLTNLHKLSLRQNKFSGGIP----LSLLQLRKLETLDLQRNSL 243 (757)
Q Consensus 180 ~~l~~L~~L~L~~-n~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~~~----~~l~~l~~L~~L~l~~n~l 243 (757)
.+.++|++|++++ +.++.. +-.++...++|++|++++|.+..... ..+...+.++.+++++|.+
T Consensus 14 ~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~ 86 (166)
T d1io0a_ 14 NNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFI 86 (166)
T ss_dssp TTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCC
T ss_pred hcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccc
Confidence 4455666666665 234321 12223445556666666555543211 1223344555555555444
Done!