Query 041026
Match_columns 149
No_of_seqs 132 out of 2455
Neff 10.9
Searched_HMMs 29240
Date Mon Mar 25 04:27:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041026.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041026hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 1.4E-33 5E-38 178.7 16.4 129 7-149 30-158 (169)
2 1d9s_A Cyclin-dependent kinase 100.0 1.2E-31 4E-36 164.3 12.1 128 6-148 4-132 (136)
3 3v30_A DNA-binding protein rfx 100.0 2.5E-30 8.6E-35 163.9 16.2 129 6-148 28-156 (172)
4 1awc_B Protein (GA binding pro 100.0 3E-30 1E-34 160.8 15.4 124 10-147 30-153 (153)
5 2y1l_E Darpin-8.4; hydrolase-i 100.0 6.6E-30 2.3E-34 161.7 16.2 128 7-148 40-167 (169)
6 3v31_A Ankyrin repeat family A 100.0 5.3E-30 1.8E-34 161.7 15.4 129 6-148 28-156 (167)
7 2rfm_A Putative ankyrin repeat 100.0 8.1E-30 2.8E-34 164.2 16.3 128 7-148 61-188 (192)
8 2jab_A H10-2-G3; HER2, darpin, 100.0 3.6E-30 1.2E-34 157.6 13.2 125 10-148 10-134 (136)
9 4b93_B Ankyrin repeat domain-c 100.0 4.9E-30 1.7E-34 173.4 14.7 128 7-148 79-206 (269)
10 1n0r_A 4ANK, 4 ankyrin repeats 100.0 3.1E-29 1.1E-33 151.0 15.8 122 13-148 1-122 (126)
11 2rfm_A Putative ankyrin repeat 100.0 5.2E-30 1.8E-34 165.1 13.1 129 6-148 27-155 (192)
12 1bi7_B P16INK4A, MTS1, multipl 100.0 3.5E-30 1.2E-34 161.1 11.8 129 5-148 3-132 (156)
13 4gpm_A Engineered protein OR26 100.0 1.7E-29 5.7E-34 160.0 15.0 119 16-148 6-124 (169)
14 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.1E-29 3.8E-34 159.3 14.1 128 7-148 31-158 (162)
15 3c5r_A BARD-1, BRCA1-associate 100.0 1.7E-30 5.9E-35 159.1 8.9 126 9-148 5-130 (137)
16 3twr_A Tankyrase-2; ankyrin re 100.0 1.4E-29 4.7E-34 159.5 12.9 127 7-148 35-161 (165)
17 1bd8_A P19INK4D CDK4/6 inhibit 100.0 3.7E-29 1.3E-33 156.1 14.3 127 6-148 28-154 (156)
18 3f6q_A Integrin-linked protein 100.0 1.4E-29 4.7E-34 161.5 11.6 129 6-148 31-159 (179)
19 3jxi_A Vanilloid receptor-rela 100.0 4.9E-29 1.7E-33 167.2 12.9 135 7-148 86-246 (260)
20 2rfa_A Transient receptor pote 100.0 2.7E-28 9.2E-33 161.1 16.1 133 8-148 69-218 (232)
21 4hbd_A KN motif and ankyrin re 100.0 1.5E-28 5.2E-33 166.6 15.2 131 6-148 103-271 (276)
22 1yyh_A HN1;, notch 1, ankyrin 100.0 1.3E-28 4.5E-33 164.8 14.6 128 7-148 117-244 (253)
23 2etb_A Transient receptor pote 100.0 9.4E-29 3.2E-33 165.6 13.9 132 10-148 86-242 (256)
24 3v31_A Ankyrin repeat family A 100.0 3.2E-28 1.1E-32 153.5 15.2 122 13-148 2-123 (167)
25 2f8y_A Notch homolog 1, transl 100.0 5.5E-28 1.9E-32 158.6 16.3 129 6-148 84-212 (223)
26 3hra_A Ankyrin repeat family p 100.0 4.3E-28 1.5E-32 156.9 15.5 99 6-106 31-129 (201)
27 2rfa_A Transient receptor pote 100.0 6E-28 2E-32 159.4 15.3 129 6-148 29-179 (232)
28 3aaa_C Myotrophin, protein V-1 100.0 3.7E-28 1.3E-32 146.2 13.0 119 11-146 4-122 (123)
29 2f8y_A Notch homolog 1, transl 100.0 1E-27 3.5E-32 157.3 16.2 96 9-106 20-115 (223)
30 2pnn_A Transient receptor pote 100.0 1.9E-28 6.6E-33 165.5 13.0 132 10-148 97-254 (273)
31 3ehr_A Osteoclast-stimulating 100.0 2.3E-29 7.8E-34 165.5 8.2 130 6-148 65-194 (222)
32 1yyh_A HN1;, notch 1, ankyrin 100.0 5.4E-28 1.9E-32 161.8 14.7 96 9-106 52-147 (253)
33 3aji_A 26S proteasome non-ATPa 100.0 1.1E-27 3.9E-32 157.9 16.1 134 7-148 33-193 (231)
34 3aji_A 26S proteasome non-ATPa 100.0 1.3E-27 4.3E-32 157.7 16.2 124 11-147 3-126 (231)
35 3hra_A Ankyrin repeat family p 100.0 1.1E-27 3.8E-32 154.9 15.6 130 7-148 65-199 (201)
36 1oy3_D Transcription factor in 100.0 6.6E-28 2.2E-32 163.0 14.5 62 6-69 37-98 (282)
37 1ikn_D Protein (I-kappa-B-alph 100.0 6.8E-28 2.3E-32 159.7 13.9 129 6-148 37-172 (236)
38 2vge_A RELA-associated inhibit 100.0 1.5E-28 5E-33 162.6 10.3 130 5-148 12-144 (229)
39 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.2E-27 4E-32 151.3 14.0 124 11-148 11-134 (169)
40 1oy3_D Transcription factor in 100.0 9E-28 3.1E-32 162.3 14.0 142 6-148 1-179 (282)
41 3t8k_A Uncharacterized protein 100.0 3.8E-29 1.3E-33 160.7 6.8 127 8-148 31-175 (186)
42 2dzn_A Probable 26S proteasome 100.0 4.1E-27 1.4E-31 154.8 16.7 133 9-147 31-194 (228)
43 3twr_A Tankyrase-2; ankyrin re 100.0 7.4E-28 2.5E-32 151.6 12.3 126 10-148 4-129 (165)
44 3kea_A K1L; tropism, ANK repea 100.0 4.7E-28 1.6E-32 164.8 12.3 127 6-148 23-150 (285)
45 1s70_B 130 kDa myosin-binding 100.0 3.3E-27 1.1E-31 161.0 16.0 128 7-148 66-253 (299)
46 2dzn_A Probable 26S proteasome 100.0 4.3E-27 1.5E-31 154.7 16.0 126 6-147 99-225 (228)
47 3ljn_A Hypothetical protein; a 100.0 6.7E-28 2.3E-32 168.7 12.7 127 8-148 132-265 (364)
48 4b93_B Ankyrin repeat domain-c 100.0 2.4E-28 8.1E-33 165.1 9.9 124 7-146 112-235 (269)
49 3d9h_A CDNA FLJ77766, highly s 100.0 3.7E-27 1.3E-31 160.4 15.8 136 5-148 50-211 (285)
50 1awc_B Protein (GA binding pro 100.0 2.4E-27 8.2E-32 147.6 13.6 120 14-148 2-121 (153)
51 3f6q_A Integrin-linked protein 100.0 4.1E-27 1.4E-31 150.0 14.9 124 12-148 3-126 (179)
52 1sw6_A Regulatory protein SWI6 100.0 1.1E-27 3.6E-32 165.9 13.0 140 7-148 123-304 (327)
53 2xai_A ASB-9, ankyrin repeat a 100.0 6.7E-27 2.3E-31 157.2 16.1 126 7-147 29-154 (261)
54 1k1a_A B-cell lymphoma 3-encod 100.0 6E-27 2.1E-31 155.1 15.7 97 7-106 2-102 (241)
55 3v30_A DNA-binding protein rfx 100.0 3.2E-27 1.1E-31 149.5 13.7 122 14-148 2-123 (172)
56 1ikn_D Protein (I-kappa-B-alph 100.0 1.5E-27 5E-32 158.0 12.7 130 7-148 71-205 (236)
57 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.4E-27 4.9E-32 149.7 11.5 122 12-148 3-124 (162)
58 3b7b_A Euchromatic histone-lys 100.0 8.6E-27 2.9E-31 154.2 15.8 24 123-146 173-196 (237)
59 3b7b_A Euchromatic histone-lys 100.0 1E-26 3.5E-31 153.8 16.1 96 8-106 5-100 (237)
60 3deo_A Signal recognition part 100.0 6.6E-28 2.3E-32 154.4 9.9 123 11-148 41-180 (183)
61 2xai_A ASB-9, ankyrin repeat a 100.0 7.3E-27 2.5E-31 157.0 15.2 121 13-148 2-122 (261)
62 1k1a_A B-cell lymphoma 3-encod 99.9 1.4E-26 4.9E-31 153.3 16.2 98 7-106 39-139 (241)
63 2fo1_E LIN-12 protein; beta-ba 99.9 5.5E-27 1.9E-31 164.9 14.7 130 6-148 227-367 (373)
64 3d9h_A CDNA FLJ77766, highly s 99.9 1.2E-26 4.2E-31 157.8 15.8 124 9-148 120-243 (285)
65 1n11_A Ankyrin; clathrin, BAND 99.9 6.6E-27 2.3E-31 167.1 14.8 128 6-147 6-133 (437)
66 2etb_A Transient receptor pote 99.9 2.5E-27 8.6E-32 158.6 11.6 125 10-148 39-202 (256)
67 1bd8_A P19INK4D CDK4/6 inhibit 99.9 7.5E-27 2.6E-31 145.6 12.5 121 14-148 2-122 (156)
68 3utm_A Tankyrase-1; tankyrase, 99.9 3E-26 1E-30 158.9 16.9 99 7-108 51-149 (351)
69 1n11_A Ankyrin; clathrin, BAND 99.9 1.7E-26 5.7E-31 165.0 15.9 126 8-147 272-397 (437)
70 3utm_A Tankyrase-1; tankyrase, 99.9 3.3E-26 1.1E-30 158.7 16.3 129 7-148 84-301 (351)
71 3ui2_A Signal recognition part 99.9 1.8E-27 6.1E-32 158.7 9.1 123 11-148 42-181 (244)
72 1ycs_B 53BP2, P53BP2; ankyrin 99.9 2.6E-27 9.1E-32 157.4 9.7 123 12-148 35-160 (239)
73 2pnn_A Transient receptor pote 99.9 2.2E-26 7.6E-31 155.4 12.6 128 9-148 49-214 (273)
74 3ljn_A Hypothetical protein; a 99.9 2.3E-26 7.8E-31 161.0 13.0 133 7-148 46-232 (364)
75 1wdy_A 2-5A-dependent ribonucl 99.9 1.5E-25 5.3E-30 151.3 16.2 130 11-148 36-169 (285)
76 3jxi_A Vanilloid receptor-rela 99.9 2.4E-26 8.1E-31 154.1 11.8 126 11-148 43-206 (260)
77 1wdy_A 2-5A-dependent ribonucl 99.9 2.1E-25 7.3E-30 150.6 16.2 123 11-147 145-273 (285)
78 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.4E-26 4.8E-31 153.9 9.8 123 11-148 2-124 (239)
79 3kea_A K1L; tropism, ANK repea 99.9 2.6E-26 8.8E-31 156.3 11.3 128 13-148 61-216 (285)
80 3eu9_A Huntingtin-interacting 99.9 2.1E-25 7.1E-30 147.3 14.9 126 9-148 104-231 (240)
81 3jue_A Arfgap with coiled-coil 99.9 6.2E-26 2.1E-30 159.1 12.4 123 12-148 197-322 (368)
82 2fo1_E LIN-12 protein; beta-ba 99.9 1.5E-25 5.2E-30 157.6 13.0 133 7-147 159-299 (373)
83 2vge_A RELA-associated inhibit 99.9 3.9E-28 1.3E-32 160.6 -0.2 137 6-145 46-206 (229)
84 1n0q_A 3ANK, 3 ankyrin repeats 99.9 3E-25 1E-29 127.3 11.8 91 13-106 1-91 (93)
85 1s70_B 130 kDa myosin-binding 99.9 6.7E-26 2.3E-30 154.5 9.9 123 11-147 37-159 (299)
86 2b0o_E UPLC1; arfgap, structur 99.9 4.1E-25 1.4E-29 151.5 13.7 121 14-148 151-280 (301)
87 4g8k_A 2-5A-dependent ribonucl 99.9 8.2E-25 2.8E-29 151.7 15.4 128 8-148 162-294 (337)
88 3eu9_A Huntingtin-interacting 99.9 9.9E-25 3.4E-29 144.1 14.8 124 10-147 5-129 (240)
89 1dcq_A PYK2-associated protein 99.9 6.2E-25 2.1E-29 149.0 13.6 122 15-148 131-259 (278)
90 3lvq_E ARF-GAP with SH3 domain 99.9 6.4E-25 2.2E-29 159.5 13.6 122 14-149 132-262 (497)
91 4g8k_A 2-5A-dependent ribonucl 99.9 2.3E-24 8E-29 149.4 14.3 124 7-148 195-322 (337)
92 2l6b_A NR1C; ankyrin, consensu 99.9 3.2E-25 1.1E-29 131.8 7.2 109 9-131 4-112 (115)
93 1n0q_A 3ANK, 3 ankyrin repeats 99.9 4.2E-24 1.4E-28 122.5 11.1 89 48-148 1-89 (93)
94 2b0o_E UPLC1; arfgap, structur 99.9 2.9E-24 1E-28 147.2 10.0 111 10-140 186-299 (301)
95 1bi7_B P16INK4A, MTS1, multipl 99.9 1.2E-24 4.2E-29 135.8 6.7 112 7-133 38-150 (156)
96 2jab_A H10-2-G3; HER2, darpin, 99.9 3E-23 1E-27 126.7 12.1 97 7-106 40-136 (136)
97 1sw6_A Regulatory protein SWI6 99.9 1.3E-24 4.4E-29 150.5 5.8 119 7-138 157-327 (327)
98 1d9s_A Cyclin-dependent kinase 99.9 1.1E-23 3.8E-28 128.6 8.9 96 7-106 38-134 (136)
99 2aja_A Ankyrin repeat family p 99.9 3.1E-25 1.1E-29 156.0 -0.3 130 6-148 84-220 (376)
100 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.6E-22 8.8E-27 120.5 12.6 97 7-106 28-124 (126)
101 1dcq_A PYK2-associated protein 99.9 4E-22 1.4E-26 135.2 12.7 97 7-106 162-261 (278)
102 3c5r_A BARD-1, BRCA1-associate 99.9 5.4E-22 1.8E-26 121.2 11.5 93 44-148 5-97 (137)
103 2zgd_A 3 repeat synthetic anky 99.9 3.4E-22 1.2E-26 117.9 9.4 92 44-147 19-110 (110)
104 3t8k_A Uncharacterized protein 99.9 2.9E-23 1E-27 133.2 5.0 119 14-148 6-141 (186)
105 2zgd_A 3 repeat synthetic anky 99.9 5.2E-22 1.8E-26 117.1 9.7 94 6-102 16-109 (110)
106 4hbd_A KN motif and ankyrin re 99.9 8.3E-22 2.8E-26 133.5 11.8 99 6-106 175-273 (276)
107 3lvq_E ARF-GAP with SH3 domain 99.9 1.5E-21 5.3E-26 141.8 11.8 97 11-115 168-267 (497)
108 3aaa_C Myotrophin, protein V-1 99.9 2.3E-21 7.7E-26 116.4 9.9 91 46-148 4-94 (123)
109 2l6b_A NR1C; ankyrin, consensu 99.9 9E-22 3.1E-26 116.8 7.9 93 44-148 4-96 (115)
110 2aja_A Ankyrin repeat family p 99.9 1.2E-23 4.3E-28 147.9 -1.5 120 9-148 123-246 (376)
111 3jue_A Arfgap with coiled-coil 99.9 7.7E-21 2.6E-25 133.3 12.4 120 7-137 226-347 (368)
112 3ehr_A Osteoclast-stimulating 99.8 2.6E-21 8.8E-26 127.0 5.6 97 7-106 99-196 (222)
113 3ui2_A Signal recognition part 99.8 3E-20 1E-24 123.8 10.7 98 6-106 69-183 (244)
114 3deo_A Signal recognition part 99.8 2.7E-20 9.2E-25 118.9 9.6 87 6-95 68-155 (183)
115 1gp8_A Protein (scaffolding pr 70.2 4.1 0.00014 18.4 2.1 18 131-148 17-34 (40)
116 3mkq_B Coatomer subunit alpha; 44.5 55 0.0019 20.4 7.8 23 84-106 93-116 (177)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.4e-33 Score=178.74 Aligned_cols=129 Identities=22% Similarity=0.248 Sum_probs=122.8
Q ss_pred ccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcH
Q 041026 7 VHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTP 86 (149)
Q Consensus 7 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tp 86 (149)
++.+|.+|.||||+|+..++.+++++|++.+++ ++.++..|+||||+|+..|+.+++++|++ .|++++.+|..|+||
T Consensus 30 vn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad--~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~-~gadvn~~d~~G~Tp 106 (169)
T 4gpm_A 30 VNASDSDGRTPLHHAAENGHKEVVKLLISKGAD--VNAKDSDGRTPLHHAAENGHKEVVKLLIS-KGADVNAKDSDGRTP 106 (169)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCH
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccc--hhhhccCCCCHHHHHHHcCCHHHHHHHHH-CcCCCCCCCCCCCCH
Confidence 578899999999999999999999999999999 99999999999999999999999999995 689999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhhC
Q 041026 87 LHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNTA 149 (149)
Q Consensus 87 lh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~a 149 (149)
||+|+..|+.+++++|++.| ++++ .+|..|+|||++|+..|+.+++++|.+.
T Consensus 107 Lh~A~~~g~~~~v~~Ll~~g-----ad~~------~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 158 (169)
T 4gpm_A 107 LHHAAENGHKEVVKLLISKG-----ADVN------TSDSDGRTPLDLAREHGNEEVVKLLEKQ 158 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTT-----CCTT------CCCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred HHHHHHcCCHHHHHHHHHcC-----CCcc------ccCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 99999999999999999999 8777 7999999999999999999999999763
No 2
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.98 E-value=1.2e-31 Score=164.29 Aligned_cols=128 Identities=17% Similarity=0.098 Sum_probs=120.8
Q ss_pred cccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCC-CC
Q 041026 6 LVHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQ-GD 84 (149)
Q Consensus 6 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~-g~ 84 (149)
.++.+|..|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+. ++.+++++|++ .+++++.+|.. |.
T Consensus 4 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~-~g~~~~~~~~~~g~ 79 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAARGQVETVRQLLEAGAD--PNALNRFGRRPIQVMMM-GSAQVAELLLL-HGAEPNCADPATLT 79 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTCCTTTTTSTT-SCHHHHHHHHH-HTCCSSCCBTTTTB
T ss_pred CccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCC--cCCcCCCCCCHHHHHHc-CCHHHHHHHHH-CCCCCCCcCCCCCC
Confidence 4678899999999999999999999999999988 88999999999999999 99999999996 58999999999 99
Q ss_pred cHHHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 85 TPLHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 85 tplh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
||||+|+..|+.+++++|+++| ++++ .++..|.|||++|+..++.+++++|.+
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~g-----a~~~------~~d~~g~tpl~~A~~~~~~~~~~~Ll~ 132 (136)
T 1d9s_A 80 RPVHDAAREGFLDTLVVLHRAG-----ARLD------VCDAWGRLPVDLAEEQGHRDIARYLHA 132 (136)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTC-----CCCC------CCSSSSSCHHHHHHHHTCHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcC-----CCCC------ccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 9999999999999999999998 7777 789999999999999999999999875
No 3
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=2.5e-30 Score=163.89 Aligned_cols=129 Identities=21% Similarity=0.189 Sum_probs=122.0
Q ss_pred cccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCc
Q 041026 6 LVHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDT 85 (149)
Q Consensus 6 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 85 (149)
.++.+|..|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..++.+++++|++ .+++++.+|..|.|
T Consensus 28 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t 104 (172)
T 3v30_A 28 LVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD--PHILAKERESALSLASTGGYTDIVGLLLE-RDVDINIYDWNGGT 104 (172)
T ss_dssp GGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC--TTCCCTTCCCHHHHHHHTTCHHHHHHHHT-TTCCTTCCCTTSCC
T ss_pred cccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--chhhcccCCCHHHHHHHCCCHHHHHHHHH-cCCCCCCCCCCCCC
Confidence 4678899999999999999999999999999999 88999999999999999999999999995 58999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 86 PLHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 86 plh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
|||+|+..|+.+++++|++.| ++++ .++..|.||+++|+..++.+++++|.+
T Consensus 105 ~L~~A~~~~~~~~v~~Ll~~g-----a~~~------~~~~~g~t~l~~A~~~~~~~~~~~L~~ 156 (172)
T 3v30_A 105 PLLYAVRGNHVKCVEALLARG-----ADLT------TEADSGYTPMDLAVALGYRKVQQVIEN 156 (172)
T ss_dssp HHHHHHHTTCHHHHHHHHHTT-----CCTT------CCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcC-----CCcc------ccCCCCCCHHHHHHHhCcHHHHHHHHH
Confidence 999999999999999999998 7777 789999999999999999999999874
No 4
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=3e-30 Score=160.82 Aligned_cols=124 Identities=19% Similarity=0.152 Sum_probs=117.7
Q ss_pred cCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHHHH
Q 041026 10 NDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPLHC 89 (149)
Q Consensus 10 ~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tplh~ 89 (149)
.|..|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..++.+++++|++ .+++++.+|..|.||||+
T Consensus 30 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~ 106 (153)
T 1awc_B 30 TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS--RDARTKVDRTPLHMAASEGHANIVEVLLK-HGADVNAKDMLKMTALHW 106 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC--TTCCCTTCCCHHHHHHHHTCHHHHHHHHT-TTCCTTCCCTTSCCHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--CCCCCCCCCCHHHHHHHcChHHHHHHHHH-cCCCCCCCCCCCCCHHHH
Confidence 578899999999999999999999999988 88899999999999999999999999995 689999999999999999
Q ss_pred HHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhh
Q 041026 90 AARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTN 147 (149)
Q Consensus 90 a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~ 147 (149)
|+..|+.+++++|+++| ++++ .++..|.||+++|+..|+.+++++|+
T Consensus 107 A~~~~~~~~v~~Ll~~g-----a~~~------~~~~~g~t~l~~A~~~~~~~i~~~L~ 153 (153)
T 1awc_B 107 ATEHNHQEVVELLIKYG-----ADVH------TQSKFCKTAFDISIDNGNEDLAEILQ 153 (153)
T ss_dssp HHHTTCHHHHHHHHHTT-----CCTT------CCCTTSCCHHHHHHHTTCHHHHHHHC
T ss_pred HHHcCCHHHHHHHHHcC-----CCcc------ccCCCCCCHHHHHHHcCCHHHHHHhC
Confidence 99999999999999999 7777 78999999999999999999999985
No 5
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=6.6e-30 Score=161.70 Aligned_cols=128 Identities=23% Similarity=0.272 Sum_probs=120.5
Q ss_pred ccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcH
Q 041026 7 VHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTP 86 (149)
Q Consensus 7 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tp 86 (149)
++.+|..|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..++.+++++|++ .+++++.+|..|.||
T Consensus 40 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~ 116 (169)
T 2y1l_E 40 VNAEDASGWTPLHLAAFNGHLEIVEVLLKNGAD--VNAVDHAGMTPLRLAALFGHLEIVEVLLK-NGADVNANDMEGHTP 116 (169)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCH
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--CCccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCH
Confidence 467789999999999999999999999999988 88899999999999999999999999995 689999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 87 LHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 87 lh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
||+|+..|+.+++++|+++| ++++ .+|..|.||+++|+..|+.+++++|.+
T Consensus 117 L~~A~~~~~~~~v~~Ll~~g-----~~~~------~~~~~g~t~l~~A~~~~~~~~~~~L~~ 167 (169)
T 2y1l_E 117 LHLAAMFGHLEIVEVLLKNG-----ADVN------AQDKFGKTAFDISIDNGNEDLAEILQK 167 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTT-----CCTT------CCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHcC-----CCCC------CcCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence 99999999999999999998 7776 789999999999999999999999975
No 6
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=5.3e-30 Score=161.70 Aligned_cols=129 Identities=19% Similarity=0.242 Sum_probs=120.8
Q ss_pred cccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCc
Q 041026 6 LVHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDT 85 (149)
Q Consensus 6 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 85 (149)
.++.+|..|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..++.+++++|++ .+++++.+|..|.|
T Consensus 28 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t 104 (167)
T 3v31_A 28 VINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD--PQLLGKGRESALSLACSKGYTDIVKMLLD-CGVDVNEYDWNGGT 104 (167)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHHHTCHHHHHHHHH-HTCCTTCCCTTSCC
T ss_pred CcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC--CCCcCCCCCcHHHHHHHcCCHHHHHHHHH-CCCCCCcCCCCCCC
Confidence 3677899999999999999999999999999988 88889999999999999999999999996 48999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 86 PLHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 86 plh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
|||+|+..|+.+++++|++.| ++++ .++..|.||+++|+..|+.+++++|.+
T Consensus 105 ~L~~A~~~~~~~~v~~Ll~~g-----~~~~------~~~~~g~t~l~~A~~~~~~~~~~~L~~ 156 (167)
T 3v31_A 105 PLLYAVHGNHVKCVKMLLESG-----ADPT------IETDSGYNSMDLAVALGYRSVQQVIES 156 (167)
T ss_dssp HHHHHHHTTCHHHHHHHHHTT-----CCTT------CCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcC-----CCCC------CcCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 999999999999999999998 7777 789999999999999999999999864
No 7
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=8.1e-30 Score=164.22 Aligned_cols=128 Identities=17% Similarity=0.166 Sum_probs=99.1
Q ss_pred ccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcH
Q 041026 7 VHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTP 86 (149)
Q Consensus 7 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tp 86 (149)
++.+|..|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..++.+++++|++ .+++++.+|..|.||
T Consensus 61 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~ 137 (192)
T 2rfm_A 61 LEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN--VNTKDFSGKTPLMWSIIFGYSEMSYFLLE-HGANVNDRNLEGETP 137 (192)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC--TTCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCSSCCCTTCCCH
T ss_pred cccccccCccHHHHHHHcCCHHHHHHHHHCCCC--CCCCCCCCCcHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCCH
Confidence 455667777777777777777777777777777 77777777788888887788888887774 477777777778888
Q ss_pred HHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 87 LHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 87 lh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
||+|+..|+.+++++|+++| ++++ .++..|.||+++|+..|+.+++++|.+
T Consensus 138 L~~A~~~~~~~~v~~Ll~~g-----a~~~------~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 188 (192)
T 2rfm_A 138 LIVASKYGRSEIVKKLLELG-----ADIS------ARDLTGLTAEASARIFGRQEVIKIFTE 188 (192)
T ss_dssp HHHHHHHTCHHHHHHHHHTT-----CCTT------CBCTTSCBHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCC-----CCCC------CcCCCCCCHHHHHHHhCcHHHHHHHHh
Confidence 88888888888888888777 6665 678888888888888888888888764
No 8
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.97 E-value=3.6e-30 Score=157.63 Aligned_cols=125 Identities=19% Similarity=0.160 Sum_probs=116.5
Q ss_pred cCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHHHH
Q 041026 10 NDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPLHC 89 (149)
Q Consensus 10 ~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tplh~ 89 (149)
....+.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..++.+++++|++ .+++++.+|..|.||||+
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~d~~g~t~L~~ 86 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGAD--VNAKDEYGLTPLYLATAHGHLEIVEVLLK-NGADVNAVDAIGFTPLHL 86 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTCCCHHHH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCC--CCCcCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCcCCCCCCCHHHH
Confidence 345688999999999999999999999988 88999999999999999999999999995 589999999999999999
Q ss_pred HHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 90 AARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 90 a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
|+..|+.+++++|+++| ++++ .+|..|.|||++|+..|+.+++++|.+
T Consensus 87 A~~~~~~~~v~~Ll~~g-----~~~~------~~~~~g~tpl~~A~~~~~~~~~~~Ll~ 134 (136)
T 2jab_A 87 AAFIGHLEIAEVLLKHG-----ADVN------AQDKFGKTAFDISIGNGNEDLAEILQK 134 (136)
T ss_dssp HHHHTCHHHHHHHHHTT-----CCTT------CCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcC-----CCCc------CcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 99999999999999998 7776 789999999999999999999999875
No 9
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.97 E-value=4.9e-30 Score=173.39 Aligned_cols=128 Identities=23% Similarity=0.251 Sum_probs=119.2
Q ss_pred ccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcH
Q 041026 7 VHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTP 86 (149)
Q Consensus 7 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tp 86 (149)
++.+|.+|.||||+|+..|+.+++++|++.+++ ++..+..|.||+++|+..++.+++++|++ .|++++.+|..|.||
T Consensus 79 vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~--~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~-~g~~~n~~d~~g~Tp 155 (269)
T 4b93_B 79 VNVTSQDGSSPLHVAALHGRADLIPLLLKHGAN--AGARNADQAVPLHLACQQGHFQVVKCLLD-SNAKPNKKDLSGNTP 155 (269)
T ss_dssp TTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCC--TTCCCTTCCCHHHHHHHHTCHHHHHHHHH-TTCCSCCCCTTCCCH
T ss_pred CCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCC--cCccCCCCCCccccccccChHHHHHHHHH-CCCCCCCCCCCCCCH
Confidence 567899999999999999999999999999998 88889999999999999999999999995 589999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 87 LHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 87 lh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
||+|+..|+.+++++|+++| ++++ .++..|.||||+|+..|+.+++++|.+
T Consensus 156 L~~A~~~g~~~~v~~Ll~~g-----advn------~~~~~g~t~Lh~A~~~g~~~~v~~Ll~ 206 (269)
T 4b93_B 156 LIYACSGGHHELVALLLQHG-----ASIN------ASNNKGNTALHEAVIEKHVFVVELLLL 206 (269)
T ss_dssp HHHHHHTTCGGGHHHHHHTT-----CCTT------CBCTTSCBHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHCC-----CCCC------ccccCCCcHHHHHHHcCCHHHHHHHHH
Confidence 99999999999999999998 7777 789999999999999999999999875
No 10
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.97 E-value=3.1e-29 Score=150.95 Aligned_cols=122 Identities=25% Similarity=0.279 Sum_probs=115.4
Q ss_pred CCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHHHHHHH
Q 041026 13 TNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPLHCAAR 92 (149)
Q Consensus 13 ~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tplh~a~~ 92 (149)
+|.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+|+..++.+++++|++ .+.+++.+|..|.||||+|+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~--~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~l~~A~~ 77 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD--VNAKDKNGRTPLHLAARNGHLEVVKLLLE-AGADVNAKDKNGRTPLHLAAR 77 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCC--TTCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCC--CCCcCCCCCcHHHHHHHcCcHHHHHHHHH-cCCCCcccCCCCCcHHHHHHH
Confidence 589999999999999999999999988 88889999999999999999999999995 589999999999999999999
Q ss_pred cCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 93 AGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 93 ~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
.|+.+++++|++.| ++++ .++..|.||+++|+..++.+++++|.+
T Consensus 78 ~~~~~~~~~Ll~~g-----~~~~------~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 122 (126)
T 1n0r_A 78 NGHLEVVKLLLEAG-----ADVN------AKDKNGRTPLHLAARNGHLEVVKLLLE 122 (126)
T ss_dssp TTCHHHHHHHHHTT-----CCTT------CCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred cChHHHHHHHHHcC-----CCCc------ccCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 99999999999998 7766 789999999999999999999999874
No 11
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=5.2e-30 Score=165.09 Aligned_cols=129 Identities=19% Similarity=0.142 Sum_probs=121.5
Q ss_pred cccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCc
Q 041026 6 LVHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDT 85 (149)
Q Consensus 6 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 85 (149)
+++.+|..|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..++.+++++|++. +.+++.+|..|.|
T Consensus 27 ~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t 103 (192)
T 2rfm_A 27 LRNYRDSYNRTPLMVACMLGMENAIDKLVENFDK--LEDKDIEGSTALIWAVKNNRLGIAEKLLSK-GSNVNTKDFSGKT 103 (192)
T ss_dssp HHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTSCC
T ss_pred HHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccc--cccccccCccHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCc
Confidence 4677899999999999999999999999999988 888999999999999999999999999965 8899999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 86 PLHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 86 plh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
|||+|+..|+.+++++|++.| ++++ .++..|.||||+|+..|+.+++++|.+
T Consensus 104 ~L~~A~~~~~~~~v~~Ll~~g-----~~~~------~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 155 (192)
T 2rfm_A 104 PLMWSIIFGYSEMSYFLLEHG-----ANVN------DRNLEGETPLIVASKYGRSEIVKKLLE 155 (192)
T ss_dssp HHHHHHHHTCHHHHHHHHHTT-----CCSS------CCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCC-----CCCC------CCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 999999999999999999998 7777 789999999999999999999999864
No 12
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.97 E-value=3.5e-30 Score=161.06 Aligned_cols=129 Identities=17% Similarity=0.071 Sum_probs=115.6
Q ss_pred ccccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCC
Q 041026 5 NLVHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGD 84 (149)
Q Consensus 5 ~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~ 84 (149)
...+..+..|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+ .++.+++++|++ .+++++.+|..|.
T Consensus 3 p~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~-~g~~~~~~d~~g~ 78 (156)
T 1bi7_B 3 PAAGSSMEPSADWLATAAARGRVEEVRALLEAGAN--PNAPNSYGRRPIQVMM-MGSARVAELLLL-HGAEPNCADPATL 78 (156)
T ss_dssp -------CCSTTHHHHHHHHTCHHHHHHHHTTTCC--TTCCCSSSCCTTTSSC-TTCHHHHHHHHT-TTCCCCCCCTTTC
T ss_pred CCccCCCccchHHHHHHHHcCCHHHHHHHHHcCCC--CCCCCCCCCCHHHHHH-cCCHHHHHHHHH-cCCCCCCcCCCCC
Confidence 34567789999999999999999999999999988 8899999999999985 899999999995 5899999999999
Q ss_pred c-HHHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 85 T-PLHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 85 t-plh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
| |||+|+..|+.+++++|+++| ++++ .++..|.||||+|+..|+.+++++|.+
T Consensus 79 ttpL~~A~~~~~~~~v~~Ll~~g-----a~~~------~~d~~g~tpl~~A~~~~~~~~v~~Ll~ 132 (156)
T 1bi7_B 79 TRPVHDAAREGFLDTLVVLHRAG-----ARLD------VRDAWGRLPVDLAEELGHRDVARYLRA 132 (156)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHT-----CCSS------CCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred cHHHHHHHHCCCHHHHHHHHHcC-----CCCc------ccCCCCCCHHHHHHHhCHHHHHHHHHH
Confidence 9 999999999999999999999 8777 789999999999999999999999875
No 13
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=1.7e-29 Score=160.05 Aligned_cols=119 Identities=23% Similarity=0.206 Sum_probs=113.2
Q ss_pred CHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHHHHHHHcCC
Q 041026 16 SPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPLHCAARAGK 95 (149)
Q Consensus 16 t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tplh~a~~~g~ 95 (149)
++|+.||+.|+.++++.|++.|++ ++.++..|+||||+|+..++.+++++|++ .+++++.+|..|+||||+|+..|+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gad--vn~~d~~g~t~l~~a~~~~~~~~~~~ll~-~gad~~~~d~~g~TpLh~A~~~g~ 82 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGAD--VNASDSDGRTPLHHAAENGHKEVVKLLIS-KGADVNAKDSDGRTPLHHAAENGH 82 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCC--CCCcCCCCCCHHHHHHHcCCHHHHHHHHh-cccchhhhccCCCCHHHHHHHcCC
Confidence 369999999999999999999999 99999999999999999999999999995 689999999999999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 96 LNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 96 ~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
.+++++|+++| ++++ .+|..|+||||+|+..|+.+++++|.+
T Consensus 83 ~~~v~~Ll~~g-----advn------~~d~~G~TpLh~A~~~g~~~~v~~Ll~ 124 (169)
T 4gpm_A 83 KEVVKLLISKG-----ADVN------AKDSDGRTPLHHAAENGHKEVVKLLIS 124 (169)
T ss_dssp HHHHHHHHHTT-----CCTT------CCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHCc-----CCCC------CCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 99999999999 8777 789999999999999999999999875
No 14
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=1.1e-29 Score=159.32 Aligned_cols=128 Identities=20% Similarity=0.263 Sum_probs=118.5
Q ss_pred ccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcH
Q 041026 7 VHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTP 86 (149)
Q Consensus 7 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tp 86 (149)
++.+|..|.||||+|+. |+.+++++|++.+++ ++..+..|.||||+|+..++.+++++|++ .+++++.+|..|.||
T Consensus 31 ~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~ 106 (162)
T 1ihb_A 31 VNAQNGFGRTALQVMKL-GNPEIARRLLLRGAN--PDLKDRTGFAVIHDAARAGFLDTLQTLLE-FQADVNIEDNEGNLP 106 (162)
T ss_dssp TTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCH
T ss_pred ccccCccCccHHHHHHc-CcHHHHHHHHHcCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCH
Confidence 46778999999999999 999999999999988 88899999999999999999999999995 689999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 87 LHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 87 lh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
||+|+..|+.+++++|++++ ++. ++.++..|.|||++|+..|+.+++++|.+
T Consensus 107 L~~A~~~~~~~~v~~Ll~~g-----~~~-----~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 158 (162)
T 1ihb_A 107 LHLAAKEGHLRVVEFLVKHT-----ASN-----VGHRNHKGDTACDLARLYGRNEVVSLMQA 158 (162)
T ss_dssp HHHHHHTTCHHHHHHHHHHS-----CCC-----TTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcc-----CCC-----CCCcCCCCCcHHHHHHHcCCHHHHHHHHH
Confidence 99999999999999999999 542 23789999999999999999999999875
No 15
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.97 E-value=1.7e-30 Score=159.14 Aligned_cols=126 Identities=19% Similarity=0.242 Sum_probs=117.5
Q ss_pred ccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHHH
Q 041026 9 LNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPLH 88 (149)
Q Consensus 9 ~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tplh 88 (149)
.+|.+|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..++.+++++|++ .+++++.+|..|.||||
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~ 81 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSD--PNVKDHAGWTPLHEACNHGHLKVVELLLQ-HKALVNTTGYQNDSPLH 81 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC--SCCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCGGGCCHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--CCcCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCcccCcCCCCCCHHH
Confidence 5789999999999999999999999999998 88999999999999999999999999995 68999999999999999
Q ss_pred HHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 89 CAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 89 ~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
+|+..|+.+++++|+++| ++++ .+|..|.||+++|+..+..+++++|++
T Consensus 82 ~A~~~~~~~~v~~Ll~~g-----a~~~------~~~~~g~tpl~~A~~~~~~~~l~~l~~ 130 (137)
T 3c5r_A 82 DAAKNGHVDIVKLLLSYG-----ASRN------AVNIFGLRPVDYTDDESMKSLLLLPEK 130 (137)
T ss_dssp HHHHTTCHHHHHHHHHTT-----CCTT------CCCTTSCCGGGGCCCHHHHHHHSCC--
T ss_pred HHHHcCCHHHHHHHHHcC-----CCCC------CCCCCCCCHHHHHhhccHHHHHhhccc
Confidence 999999999999999998 7777 899999999999999999999988765
No 16
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=1.4e-29 Score=159.51 Aligned_cols=127 Identities=23% Similarity=0.232 Sum_probs=115.9
Q ss_pred ccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcH
Q 041026 7 VHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTP 86 (149)
Q Consensus 7 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tp 86 (149)
++..+..|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..++.+++++|++ .+++++.+|..|.||
T Consensus 35 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~ 111 (165)
T 3twr_A 35 CRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD--VHAKDKGGLVPLHNACSYGHYEVAELLVK-HGAVVNVADLWKFTP 111 (165)
T ss_dssp CCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTCCCH
T ss_pred ccccccCCCCHHHHHHHcChHHHHHHHHhcCCC--CCccCCCCCCHHHHHHHcCcHHHHHHHHh-CCCCCCCcCCCCCCH
Confidence 345667889999999999999999999999988 88899999999999999999999999995 689999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 87 LHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 87 lh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
||+|+..|+.+++++|+++| ++++ .++..|.||+++|+. ++.+++++|.+
T Consensus 112 L~~A~~~~~~~~v~~Ll~~g-----a~~~------~~~~~g~t~l~~a~~-~~~~i~~~L~~ 161 (165)
T 3twr_A 112 LHEAAAKGKYEICKLLLQHG-----ADPT------KKNRDGNTPLDLVKD-GDTDIQDLLRG 161 (165)
T ss_dssp HHHHHHTTCHHHHHHHHHTT-----CCTT------CCCTTSCCTGGGSCT-TCHHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHcC-----CCCc------ccCCCCCChhHhHhc-CChHHHHHHhh
Confidence 99999999999999999998 7777 789999999999776 89999999875
No 17
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=3.7e-29 Score=156.11 Aligned_cols=127 Identities=20% Similarity=0.125 Sum_probs=117.3
Q ss_pred cccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCc
Q 041026 6 LVHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDT 85 (149)
Q Consensus 6 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 85 (149)
.++..|..|.||||+ +..|+.+++++|++.+++ ++..+..|.||||+|+..|+.+++++|++ .|++++.+|..|.|
T Consensus 28 ~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t 103 (156)
T 1bd8_A 28 HPDALNRFGKTALQV-MMFGSTAIALELLKQGAS--PNVQDTSGTSPVHDAARTGFLDTLKVLVE-HGADVNVPDGTGAL 103 (156)
T ss_dssp CTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCSCCCCTTSCC
T ss_pred CccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCC--CCCcCCCCCCHHHHHHHcCcHHHHHHHHH-cCCCCCCcCCCCCc
Confidence 456788999999999 999999999999999998 89999999999999999999999999995 68999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 86 PLHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 86 plh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
|||+|+..|+.+++++|++.. +++.++..|.||+++|+..|+.+++++|.+
T Consensus 104 ~L~~A~~~~~~~~v~~Ll~~~------------~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 104 PIHLAVQEGHTAVVSFLAAES------------DLHRRDARGLTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp HHHHHHHHTCHHHHHHHHTTS------------CTTCCCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred HHHHHHHhChHHHHHHHHhcc------------CCCCcCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 999999999999999999863 344789999999999999999999999864
No 18
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=1.4e-29 Score=161.53 Aligned_cols=129 Identities=26% Similarity=0.256 Sum_probs=117.7
Q ss_pred cccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCc
Q 041026 6 LVHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDT 85 (149)
Q Consensus 6 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 85 (149)
.++.+|..|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..++.+++++|++ .+++++.+|..|.|
T Consensus 31 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~d~~g~t 107 (179)
T 3f6q_A 31 DLNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR--INVMNRGDDTPLHLAASHGHRDIVQKLLQ-YKADINAVNEHGNV 107 (179)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCC
T ss_pred cccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC--CCCcCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCccCCCCCC
Confidence 3677888999999999999999999999999988 88889999999999999999999999995 58999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 86 PLHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 86 plh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
|||+|+..|+.+++++|+++| ++++ .++..|.||+++|+..++.+++++|.+
T Consensus 108 ~L~~A~~~~~~~~v~~Ll~~g-----a~~~------~~~~~g~tpl~~A~~~~~~~~~~~L~~ 159 (179)
T 3f6q_A 108 PLHYACFWGQDQVAEDLVANG-----ALVS------ICNKYGEMPVDKAKAPLRELLRERAEK 159 (179)
T ss_dssp HHHHHHHTTCHHHHHHHHHTT-----CCSS------BCCTTSCCGGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCC-----CCcc------hhccCCCCcHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998 7777 789999999999999999999998875
No 19
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=4.9e-29 Score=167.22 Aligned_cols=135 Identities=15% Similarity=0.047 Sum_probs=118.0
Q ss_pred ccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCC--------------CCCCcHHHHHHHhCcHHHHHHHHHh-
Q 041026 7 VHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSG--------------KSPFSLLDVAAKYGHGEISAKIAQY- 71 (149)
Q Consensus 7 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~--------------~~~~~~l~~a~~~~~~~~~~~Ll~~- 71 (149)
++..|..|.||||+|+..|+.+++++|++.+++ ++..+ ..|.||||+|+..|+.+++++|++.
T Consensus 86 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~--~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 163 (260)
T 3jxi_A 86 FRDVYYRGQTALHIAIERRCKHYVELLVEKGAD--VHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENG 163 (260)
T ss_dssp BCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCC--TTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred ccccccCCCCHHHHHHHcCCHHHHHHHHhCCCC--cCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 344556999999999999999999999999998 77777 6899999999999999999999963
Q ss_pred -CCcceecccCCCCcHHHHHHHcCC---------HHHHHHHHHhhhcCCCCCCCC-ccccccccCCCCCHHHHHHHcCCH
Q 041026 72 -YPFFINKTNNQGDTPLHCAARAGK---------LNTATVLVDFAKHIPSTSQPP-VDLLRMENAMGNTVLREALFMLGR 140 (149)
Q Consensus 72 -~~~~~~~~~~~g~tplh~a~~~g~---------~~~v~~Ll~~~~~~~~~~~~~-~~~~~~~~~~g~t~l~~A~~~~~~ 140 (149)
.|++++.+|..|+||||+|+..++ .+++++|+++| ++++. ....+.+|..|.||||+|+..|+.
T Consensus 164 ~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~g-----a~~~~~~~~~~~~d~~g~tpL~~A~~~g~~ 238 (260)
T 3jxi_A 164 HKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKC-----AKLFPDTNLEALLNNDGLSPLMMAAKTGKI 238 (260)
T ss_dssp SCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHH-----HHHCTTCCGGGCCCTTSCCHHHHHHHTTCH
T ss_pred ccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhC-----cccccccchhhcccCCCCCHHHHHHHcCCH
Confidence 689999999999999999999888 79999999999 54420 112247899999999999999999
Q ss_pred HHHHhhhh
Q 041026 141 VNVRRTNT 148 (149)
Q Consensus 141 ~~~~~L~~ 148 (149)
+++++|.+
T Consensus 239 ~~v~~Ll~ 246 (260)
T 3jxi_A 239 GIFQHIIR 246 (260)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999864
No 20
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.96 E-value=2.7e-28 Score=161.08 Aligned_cols=133 Identities=18% Similarity=0.095 Sum_probs=110.0
Q ss_pred cccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCC-------------CCCcHHHHHHHhCcHHHHHHHHHhCCc
Q 041026 8 HLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGK-------------SPFSLLDVAAKYGHGEISAKIAQYYPF 74 (149)
Q Consensus 8 ~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~-------------~~~~~l~~a~~~~~~~~~~~Ll~~~~~ 74 (149)
+.+|..|.||||+|+..|+.+++++|++.+++ ++..+. .|.||||+|+..|+.+++++|++ .|+
T Consensus 69 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga 145 (232)
T 2rfa_A 69 TSELYEGQTALHIAVINQNVNLVRALLARGAS--VSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIE-HGA 145 (232)
T ss_dssp CSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC--TTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHH-TTC
T ss_pred cccCCCCcCHHHHHHHcCCHHHHHHHHhCCCC--CCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHH-CCC
Confidence 45677888888888888888888888888887 555543 68899999999999999999985 588
Q ss_pred ceecccCCCCcHHHHHHHcCCHHHH----HHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 75 FINKTNNQGDTPLHCAARAGKLNTA----TVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 75 ~~~~~~~~g~tplh~a~~~g~~~~v----~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
+++.+|..|.||||+|+..|+.+++ ++|++.| ++.......+.+|..|.|||++|+..|+.+++++|.+
T Consensus 146 ~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g-----~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~ 218 (232)
T 2rfa_A 146 DIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYD-----GGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQ 218 (232)
T ss_dssp CTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTT-----CSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcC-----CchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 8888899999999999999988877 8888888 5543222335789999999999999999999999875
No 21
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.96 E-value=1.5e-28 Score=166.61 Aligned_cols=131 Identities=19% Similarity=0.215 Sum_probs=112.6
Q ss_pred cccccCCCCCCHHHHHHHhCCHHHHHHHHHhCC-CC------------------------------------ccccCCCC
Q 041026 6 LVHLNDTTNKSPLSLAIEMENTDVLEYILRSLP-SG------------------------------------ISWSSGKS 48 (149)
Q Consensus 6 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~-~~------------------------------------~~~~~~~~ 48 (149)
.++.+|.+|.||||+|+..|+.+++++|++.++ +. ..+..+..
T Consensus 103 ~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~ 182 (276)
T 4hbd_A 103 VVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQA 182 (276)
T ss_dssp HHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTT
T ss_pred cCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCC
Confidence 378899999999999999999999999999987 30 11223445
Q ss_pred CCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHHHHHHHcCCHHHHHHHHH-hhhcCCCCCCCCccccccccCCC
Q 041026 49 PFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPLHCAARAGKLNTATVLVD-FAKHIPSTSQPPVDLLRMENAMG 127 (149)
Q Consensus 49 ~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tplh~a~~~g~~~~v~~Ll~-~~~~~~~~~~~~~~~~~~~~~~g 127 (149)
|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..|+.+++++|++ .| ++++ .+|..|
T Consensus 183 g~tpLh~A~~~g~~~~v~~Ll~-~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g-----ad~~------~~d~~g 250 (276)
T 4hbd_A 183 GQTALMLAVSHGRVDVVKALLA-CEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPS-----CDIS------LTDRDG 250 (276)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTT-----CCTT------CCCTTS
T ss_pred CCCHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCC-----CCCc------CcCCCC
Confidence 8889999999999999999995 589999999999999999999999999999998 66 7776 789999
Q ss_pred CCHHHHHHHcCCHHHHHhhhh
Q 041026 128 NTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 128 ~t~l~~A~~~~~~~~~~~L~~ 148 (149)
.|||++|+..|+.+++++|.+
T Consensus 251 ~TpL~~A~~~g~~~iv~~Ll~ 271 (276)
T 4hbd_A 251 STALMVALDAGQSEIASMLYS 271 (276)
T ss_dssp CCHHHHHHHHTCHHHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHh
Confidence 999999999999999998864
No 22
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.96 E-value=1.3e-28 Score=164.79 Aligned_cols=128 Identities=23% Similarity=0.196 Sum_probs=96.0
Q ss_pred ccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcH
Q 041026 7 VHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTP 86 (149)
Q Consensus 7 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tp 86 (149)
++.+|..|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..++.+++++|++ .|++++.+|..|.||
T Consensus 117 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tp 193 (253)
T 1yyh_A 117 LDARMHDGTTPLILAARLAVEGMLEDLINSHAD--VNAVDDLGKSALHWAAAVNNVDAAVVLLK-NGANKDMQNNREETP 193 (253)
T ss_dssp TTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCC--TTCBCTTSCBHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCH
T ss_pred ccccCCCCCcHHHHHHHcChHHHHHHHHHcCCC--CCCcCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCH
Confidence 455566777777777777777777777777766 66777777777777777777777777774 477777777777777
Q ss_pred HHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 87 LHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 87 lh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
||+|+..|+.+++++|+++| ++++ .+|..|.||+++|+..|+.+++++|..
T Consensus 194 L~~A~~~~~~~~v~~Ll~~g-----a~~~------~~d~~g~tpl~~A~~~g~~~i~~~l~~ 244 (253)
T 1yyh_A 194 LFLAAREGSYETAKVLLDHF-----ANRD------ITDHMDRLPRDIAQERMHHDIVRLLDL 244 (253)
T ss_dssp HHHHHHHTCHHHHHHHHHTT-----CCTT------CCCTTCCCHHHHHHHTTCHHHHHHHHC
T ss_pred HHHHHHCCCHHHHHHHHHcC-----CCcc------ccccCCCCHHHHHHHcCCHHHHHHHHH
Confidence 77777777777777777777 6665 678888888888888888888887754
No 23
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.96 E-value=9.4e-29 Score=165.58 Aligned_cols=132 Identities=18% Similarity=0.116 Sum_probs=116.4
Q ss_pred cCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCC-------------CCcHHHHHHHhCcHHHHHHHHHh--CCc
Q 041026 10 NDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKS-------------PFSLLDVAAKYGHGEISAKIAQY--YPF 74 (149)
Q Consensus 10 ~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-------------~~~~l~~a~~~~~~~~~~~Ll~~--~~~ 74 (149)
+|..|.||||+|+..|+.+++++|++.+++ ++..+.. |.||||+|+..|+.+++++|++. .|+
T Consensus 86 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~--~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga 163 (256)
T 2etb_A 86 EFYQGHSALHIAIEKRSLQCVKLLVENGAD--VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPA 163 (256)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTTCC--TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCC
T ss_pred ccccCCCHHHHHHHcCCHHHHHHHHHcCCC--CCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCC
Confidence 457899999999999999999999999998 7777775 99999999999999999999963 699
Q ss_pred ceecccCCCCcHHHHHHH--cCCHH-------HHHHHHHhhhcCCCCCCCC-ccccccccCCCCCHHHHHHHcCCHHHHH
Q 041026 75 FINKTNNQGDTPLHCAAR--AGKLN-------TATVLVDFAKHIPSTSQPP-VDLLRMENAMGNTVLREALFMLGRVNVR 144 (149)
Q Consensus 75 ~~~~~~~~g~tplh~a~~--~g~~~-------~v~~Ll~~~~~~~~~~~~~-~~~~~~~~~~g~t~l~~A~~~~~~~~~~ 144 (149)
+++.+|..|+||||+|+. .++.+ ++++|+++| +++.. ....+.+|..|.||||+|+..|+.++++
T Consensus 164 ~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~g-----a~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~ 238 (256)
T 2etb_A 164 SLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMG-----ARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFR 238 (256)
T ss_dssp CTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH-----HHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred CcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcC-----CCcccccccccccCCCCCCHHHHHHHhCCHHHHH
Confidence 999999999999999999 78888 999999999 54410 0011478999999999999999999999
Q ss_pred hhhh
Q 041026 145 RTNT 148 (149)
Q Consensus 145 ~L~~ 148 (149)
+|.+
T Consensus 239 ~Ll~ 242 (256)
T 2etb_A 239 HILQ 242 (256)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9864
No 24
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=3.2e-28 Score=153.49 Aligned_cols=122 Identities=15% Similarity=-0.000 Sum_probs=115.5
Q ss_pred CCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHHHHHHH
Q 041026 13 TNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPLHCAAR 92 (149)
Q Consensus 13 ~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tplh~a~~ 92 (149)
.|.||||.|+..|+.+++++|++.+.+ ++..+..|.||||+|+..++.+++++|++ .+++++..+..|.||||+|+.
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~ 78 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENV--INHTDEEGFTPLMWAAAHGQIAVVEFLLQ-NGADPQLLGKGRESALSLACS 78 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCC--cCCCCCCCCCHHHHHHHCCCHHHHHHHHH-cCCCCCCcCCCCCcHHHHHHH
Confidence 589999999999999999999999988 88999999999999999999999999995 589999999999999999999
Q ss_pred cCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 93 AGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 93 ~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
.|+.+++++|++.| ++++ .++..|.||||+|+..|+.+++++|.+
T Consensus 79 ~~~~~~v~~Ll~~g-----~~~~------~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 123 (167)
T 3v31_A 79 KGYTDIVKMLLDCG-----VDVN------EYDWNGGTPLLYAVHGNHVKCVKMLLE 123 (167)
T ss_dssp HTCHHHHHHHHHHT-----CCTT------CCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHCC-----CCCC------cCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 99999999999998 7777 789999999999999999999999865
No 25
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.96 E-value=5.5e-28 Score=158.63 Aligned_cols=129 Identities=22% Similarity=0.188 Sum_probs=96.9
Q ss_pred cccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCc
Q 041026 6 LVHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDT 85 (149)
Q Consensus 6 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 85 (149)
.++.+|..|.||||+|+..++.+++++|++.+++ ++..+..|.||||+|+..++.+++++|++ .+++++.+|..|.|
T Consensus 84 ~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t 160 (223)
T 2f8y_A 84 DLDARMHDGTTPLILAARLAVEGMLEDLINSHAD--VNAVDDLGKSALHWAAAVNNVDAAVVLLK-NGANKDMQNNREET 160 (223)
T ss_dssp CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC--TTCBCTTSCBHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTCCC
T ss_pred CcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCC--CcCcCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCcC
Confidence 3455566777777777777777777777777776 66677777777777777777777777774 47777777777777
Q ss_pred HHHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 86 PLHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 86 plh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
|||+|+..|+.+++++|+++| ++++ .++..|.||+++|+..++.+++++|.+
T Consensus 161 ~L~~A~~~~~~~~v~~Ll~~g-----a~~~------~~~~~g~t~l~~A~~~~~~~i~~~L~~ 212 (223)
T 2f8y_A 161 PLFLAAREGSYETAKVLLDHF-----ANRD------ITDHMDRLPRDIAQERMHHDIVRLLDE 212 (223)
T ss_dssp HHHHHHHHTCHHHHHHHHHTT-----CCTT------CCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcC-----CCCc------cccccCCCHHHHHHHhcchHHHHHHHH
Confidence 777777777777777777777 6555 677788888888888888888887764
No 26
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.96 E-value=4.3e-28 Score=156.87 Aligned_cols=99 Identities=21% Similarity=0.206 Sum_probs=90.3
Q ss_pred cccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCc
Q 041026 6 LVHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDT 85 (149)
Q Consensus 6 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 85 (149)
.++..|.+|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..++.+++++|++..+.+++..+..|.|
T Consensus 31 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 108 (201)
T 3hra_A 31 QVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGAD--INLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGN 108 (201)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCC
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCc
Confidence 4667788999999999999999999999999988 88888999999999999999999999997778888889999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhh
Q 041026 86 PLHCAARAGKLNTATVLVDFA 106 (149)
Q Consensus 86 plh~a~~~g~~~~v~~Ll~~~ 106 (149)
|||+|+..|+.+++++|++.+
T Consensus 109 ~L~~A~~~~~~~~v~~Ll~~g 129 (201)
T 3hra_A 109 ALIPAAEKGHIDNVKLLLEDG 129 (201)
T ss_dssp SHHHHHHTTCHHHHHHHHHHC
T ss_pred HHHHHHHcCCHHHHHHHHHcC
Confidence 999999999999999999987
No 27
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.96 E-value=6e-28 Score=159.41 Aligned_cols=129 Identities=16% Similarity=0.197 Sum_probs=115.1
Q ss_pred cccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCcc-----ccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceeccc
Q 041026 6 LVHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGIS-----WSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTN 80 (149)
Q Consensus 6 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~-----~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 80 (149)
.++.+|.+|.||||+|+..|+.+++++|++.+++ + +..+..|.||||+|+..|+.+++++|++ .+++++..+
T Consensus 29 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~--~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~ 105 (232)
T 2rfa_A 29 EVHQRGAMGETALHIAALYDNLEAAMVLMEAAPE--LVFEPMTSELYEGQTALHIAVINQNVNLVRALLA-RGASVSARA 105 (232)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGG--GGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCC
T ss_pred CcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCch--hccccccccCCCCcCHHHHHHHcCCHHHHHHHHh-CCCCCCccc
Confidence 3567889999999999999999999999999987 4 5567789999999999999999999995 588887766
Q ss_pred C-------------CCCcHHHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHH----
Q 041026 81 N-------------QGDTPLHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNV---- 143 (149)
Q Consensus 81 ~-------------~g~tplh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~---- 143 (149)
. .|.||||+|+..|+.+++++|+++| ++++ .+|..|.||||+|+..++.+++
T Consensus 106 ~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~------~~d~~g~t~L~~A~~~~~~~~~~~i~ 174 (232)
T 2rfa_A 106 TGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHG-----ADIR------AQDSLGNTVLHILILQPNKTFACQMY 174 (232)
T ss_dssp CSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTT-----CCTT------CCCTTSCCHHHHHHTCSCHHHHHHHH
T ss_pred CCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCC-----CCCC------CCCCCCCCHHHHHHHcCChHHHHHHH
Confidence 5 7999999999999999999999998 7777 7899999999999999999988
Q ss_pred Hhhhh
Q 041026 144 RRTNT 148 (149)
Q Consensus 144 ~~L~~ 148 (149)
++|.+
T Consensus 175 ~~Ll~ 179 (232)
T 2rfa_A 175 NLLLS 179 (232)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 76653
No 28
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.96 E-value=3.7e-28 Score=146.22 Aligned_cols=119 Identities=15% Similarity=0.084 Sum_probs=107.3
Q ss_pred CCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHHHHH
Q 041026 11 DTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPLHCA 90 (149)
Q Consensus 11 d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tplh~a 90 (149)
+..|.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+|+..++.+++++|++ .+++++.+|..|+||||+|
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~d~~g~tpL~~A 80 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGED--VNRTLEGGRKPLHYAADCGQLEILEFLLL-KGADINAPDKHHITPLLSA 80 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCC--TTSCCTTSSCHHHHHHHTTCHHHHHHHHT-TTCCTTCCCTTSCCHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCC--cCccCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCcCCCCCCCHHHHH
Confidence 56789999999999999999999999988 88999999999999999999999999995 6899999999999999999
Q ss_pred HHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhh
Q 041026 91 ARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRT 146 (149)
Q Consensus 91 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L 146 (149)
+..|+.+++++|+++| ++++ .+|..|.||+++| ...++.++|
T Consensus 81 ~~~~~~~~v~~Ll~~g-----a~~~------~~~~~g~t~l~~A---~~~~~~~ll 122 (123)
T 3aaa_C 81 VYEGHVSCVKLLLSKG-----ADKT------VKGPDGLTAFEAT---DNQAIKALL 122 (123)
T ss_dssp HHHTCHHHHHHHHHTT-----CCTT------CCCTTSCCHHHHC---CCHHHHHHH
T ss_pred HHcCCHHHHHHHHHcC-----CCCC------CcCCCCCCHHHHh---CCHHHHHHh
Confidence 9999999999999998 7777 7999999999999 455555555
No 29
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.96 E-value=1e-27 Score=157.32 Aligned_cols=96 Identities=18% Similarity=0.148 Sum_probs=62.1
Q ss_pred ccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHHH
Q 041026 9 LNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPLH 88 (149)
Q Consensus 9 ~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tplh 88 (149)
..|.+|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..++.+++++|++..+.+++..+..|.||||
T Consensus 20 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~ 97 (223)
T 2f8y_A 20 QTDRTGETALHLAARYSRSDAAKRLLEASAD--ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLI 97 (223)
T ss_dssp CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHH
T ss_pred ccCCCCCchHHHHHHcCCHHHHHHHHHcCCC--CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHH
Confidence 3466677777777777777777777777666 66666666666666666666666666665433355555666666666
Q ss_pred HHHHcCCHHHHHHHHHhh
Q 041026 89 CAARAGKLNTATVLVDFA 106 (149)
Q Consensus 89 ~a~~~g~~~~v~~Ll~~~ 106 (149)
+|+..|+.+++++|++.+
T Consensus 98 ~A~~~~~~~~~~~Ll~~g 115 (223)
T 2f8y_A 98 LAARLAVEGMLEDLINSH 115 (223)
T ss_dssp HHHHHTCHHHHHHHHHTT
T ss_pred HHHHhCcHHHHHHHHHcC
Confidence 666666666666666655
No 30
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.96 E-value=1.9e-28 Score=165.50 Aligned_cols=132 Identities=17% Similarity=0.101 Sum_probs=116.8
Q ss_pred cCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCC--------------CCCcHHHHHHHhCcHHHHHHHHHh--CC
Q 041026 10 NDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGK--------------SPFSLLDVAAKYGHGEISAKIAQY--YP 73 (149)
Q Consensus 10 ~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~--------------~~~~~l~~a~~~~~~~~~~~Ll~~--~~ 73 (149)
+|..|.||||+|+..|+.+++++|++.+++ ++..+. .|.||||+|+..|+.+++++|++. .|
T Consensus 97 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~--~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~g 174 (273)
T 2pnn_A 97 SYYKGQTALHIAIERRNMTLVTLLVENGAD--VQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQP 174 (273)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTTCC--TTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCC
T ss_pred ccCCCCCHHHHHHHcCCHHHHHHHHHCCCC--cCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCC
Confidence 677999999999999999999999999998 777776 799999999999999999999963 68
Q ss_pred cceecccCCCCcHHHHHHHcCC---------HHHHHHHHHhhhcCCCCCCCC-ccccccccCCCCCHHHHHHHcCCHHHH
Q 041026 74 FFINKTNNQGDTPLHCAARAGK---------LNTATVLVDFAKHIPSTSQPP-VDLLRMENAMGNTVLREALFMLGRVNV 143 (149)
Q Consensus 74 ~~~~~~~~~g~tplh~a~~~g~---------~~~v~~Ll~~~~~~~~~~~~~-~~~~~~~~~~g~t~l~~A~~~~~~~~~ 143 (149)
++++.+|..|+||||+|+..|+ .+++++|++.| ++++. ...++.+|..|.||||+|+..|+.+++
T Consensus 175 ad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~g-----a~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv 249 (273)
T 2pnn_A 175 ADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILG-----AKLHPTLKLEEITNRKGLTPLALAASSGKIGVL 249 (273)
T ss_dssp CCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHH-----HHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhh-----hhcccccccccccCCCCCCHHHHHHHhChHHHH
Confidence 9999999999999999999998 79999999999 54431 111235899999999999999999999
Q ss_pred Hhhhh
Q 041026 144 RRTNT 148 (149)
Q Consensus 144 ~~L~~ 148 (149)
++|.+
T Consensus 250 ~~Ll~ 254 (273)
T 2pnn_A 250 AYILQ 254 (273)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99875
No 31
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.96 E-value=2.3e-29 Score=165.49 Aligned_cols=130 Identities=20% Similarity=0.149 Sum_probs=117.7
Q ss_pred cccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCc
Q 041026 6 LVHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDT 85 (149)
Q Consensus 6 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 85 (149)
.++..|..|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..|+.+++++|++..+++++.+|..|.|
T Consensus 65 ~v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~t 142 (222)
T 3ehr_A 65 YVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVG--VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDT 142 (222)
T ss_dssp HHHHHEEEESCHHHHHHHHTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCC
T ss_pred hccccccccccccccccccCcHHHHHHHHhCCCC--ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCC
Confidence 3455677889999999999999999999999988 88899999999999999999999999996558999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 86 PLHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 86 plh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
|||+|+..|+.+++++|+++| ++++ .+|..|.||+++|+..++.++++.|..
T Consensus 143 pL~~A~~~~~~~~v~~Ll~~g-----a~~~------~~~~~g~t~l~~A~~~~~~~~l~~l~~ 194 (222)
T 3ehr_A 143 ALHAAAWKGYADIVQLLLAKG-----ARTD------LRNIEKKLAFDMATNAACASLLKKKQG 194 (222)
T ss_dssp HHHHHHHHTCHHHHHHHHHHT-----CCSC------CCCTTSCCHHHHCCSHHHHHHHC----
T ss_pred HHHHHHHcCCHHHHHHHHHcC-----CCCc------cccCCCCCHHHHhcchhHHHHHHHHhc
Confidence 999999999999999999999 8777 899999999999999999999987754
No 32
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.96 E-value=5.4e-28 Score=161.80 Aligned_cols=96 Identities=18% Similarity=0.148 Sum_probs=54.7
Q ss_pred ccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHHH
Q 041026 9 LNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPLH 88 (149)
Q Consensus 9 ~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tplh 88 (149)
..|..|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..++.+++++|++..+.+++.++..|.||||
T Consensus 52 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~ 129 (253)
T 1yyh_A 52 QTDRTGETALHLAARYSRSDAAKRLLEASAD--ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLI 129 (253)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHH
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHH
Confidence 3456666666666666666666666666665 55555566666666666666666666654322244444445555555
Q ss_pred HHHHcCCHHHHHHHHHhh
Q 041026 89 CAARAGKLNTATVLVDFA 106 (149)
Q Consensus 89 ~a~~~g~~~~v~~Ll~~~ 106 (149)
+|+..|+.+++++|++.|
T Consensus 130 ~A~~~~~~~~v~~Ll~~g 147 (253)
T 1yyh_A 130 LAARLAVEGMLEDLINSH 147 (253)
T ss_dssp HHHHHTCSSHHHHHHHTT
T ss_pred HHHHcChHHHHHHHHHcC
Confidence 555555555555555444
No 33
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.96 E-value=1.1e-27 Score=157.89 Aligned_cols=134 Identities=22% Similarity=0.239 Sum_probs=83.7
Q ss_pred ccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcH
Q 041026 7 VHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTP 86 (149)
Q Consensus 7 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tp 86 (149)
++.+|.+|.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+|+..++.+++++|++ .+.+++.++..|.||
T Consensus 33 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~ 109 (231)
T 3aji_A 33 ATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP--VNDKDDAGWSPLHIAASAGXDEIVKALLV-KGAHVNAVNQNGCTP 109 (231)
T ss_dssp GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC--SCCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCH
T ss_pred hhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCC--CCCcCCCCCCHHHHHHHcCHHHHHHHHHH-cCCCCCCCCCCCCCH
Confidence 455566667777777777777777777666666 66666666666666666666666666663 356666666666666
Q ss_pred HHHHHHcCCHHHHHHHHHhhhcCCCCCCCC---------------------------ccccccccCCCCCHHHHHHHcCC
Q 041026 87 LHCAARAGKLNTATVLVDFAKHIPSTSQPP---------------------------VDLLRMENAMGNTVLREALFMLG 139 (149)
Q Consensus 87 lh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~---------------------------~~~~~~~~~~g~t~l~~A~~~~~ 139 (149)
||+|+..|+.+++++|++.| ++++. ..+++.++..|.||||+|+..++
T Consensus 110 L~~A~~~~~~~~~~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 184 (231)
T 3aji_A 110 LHYAASKNRHEIAVMLLEGG-----ANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEER 184 (231)
T ss_dssp HHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHcCCHHHHHHHHHcC-----CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCC
Confidence 66666666666666666665 33220 12223556666666666666666
Q ss_pred HHHHHhhhh
Q 041026 140 RVNVRRTNT 148 (149)
Q Consensus 140 ~~~~~~L~~ 148 (149)
.+++++|.+
T Consensus 185 ~~~v~~Ll~ 193 (231)
T 3aji_A 185 VEEAKFLVT 193 (231)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666666643
No 34
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.96 E-value=1.3e-27 Score=157.69 Aligned_cols=124 Identities=20% Similarity=0.097 Sum_probs=106.6
Q ss_pred CCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHHHHH
Q 041026 11 DTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPLHCA 90 (149)
Q Consensus 11 d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tplh~a 90 (149)
+..+.+|||.|+..|+.+.+++++..+.. ..+..+..|.||||+|+..|+.+++++|++ .+.+++.+|..|.||||+|
T Consensus 3 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~-~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A 80 (231)
T 3aji_A 3 GCVSNIMICNLAYSGKLDELKERILADKS-LATRTDQDSRTALHWACSAGHTEIVEFLLQ-LGVPVNDKDDAGWSPLHIA 80 (231)
T ss_dssp CCCSSSHHHHHHHHTCHHHHHHHHHHCGG-GGGCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCSCCCCTTSCCHHHHH
T ss_pred CccccchHHHHHHhCCHHHHHHHHHhchh-hhhcCCCCCCCHHHHHHHcCcHHHHHHHHH-hCCCCCCcCCCCCCHHHHH
Confidence 45688999999999999999999998765 467778999999999999999999999995 5899999999999999999
Q ss_pred HHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhh
Q 041026 91 ARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTN 147 (149)
Q Consensus 91 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~ 147 (149)
+..|+.+++++|++.+ ++++ .++..|.||||+|+..++.+++++|.
T Consensus 81 ~~~~~~~~v~~Ll~~g-----~~~~------~~~~~g~t~L~~A~~~~~~~~~~~Ll 126 (231)
T 3aji_A 81 ASAGXDEIVKALLVKG-----AHVN------AVNQNGCTPLHYAASKNRHEIAVMLL 126 (231)
T ss_dssp HHHTCHHHHHHHHHTT-----CCTT------CCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHcCHHHHHHHHHHcC-----CCCC------CCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 9999999999999998 6555 55666666776666666666666654
No 35
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.96 E-value=1.1e-27 Score=154.94 Aligned_cols=130 Identities=18% Similarity=0.110 Sum_probs=119.1
Q ss_pred ccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcH
Q 041026 7 VHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTP 86 (149)
Q Consensus 7 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tp 86 (149)
++.+|..|.||||+|+..|+.+++++|++.+.. +++..+..|.||||+|+..++.+++++|++..+.+++.+|..|.||
T Consensus 65 ~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~ 143 (201)
T 3hra_A 65 INLQNSISDSPYLYAGAQGRTEILAYMLKHATP-DLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTA 143 (201)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCC-CTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCH
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCc-ccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCH
Confidence 467889999999999999999999999965543 3888899999999999999999999999977558999999999999
Q ss_pred HHHHHHcCC-----HHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 87 LHCAARAGK-----LNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 87 lh~a~~~g~-----~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
||+|+..++ .+++++|++.| ++++ .++..|.||+++|+..|+.+++++|.+
T Consensus 144 L~~A~~~~~~~~~~~~~v~~Ll~~g-----a~~~------~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 199 (201)
T 3hra_A 144 LIEAVGLREGNQLYQDIVKLLMENG-----ADQS------IKDNSGRTAMDYANQKGYTEISKILAQ 199 (201)
T ss_dssp HHHHHHSSCCSHHHHHHHHHHHHTT-----CCTT------CCCTTSCCHHHHHHHHTCHHHHHHHHT
T ss_pred HHHHHHhccchhhHHHHHHHHHHCC-----CCCC------ccCCCCCCHHHHHHHcCCHhHHHHHHh
Confidence 999999998 89999999999 8777 789999999999999999999999975
No 36
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.96 E-value=6.6e-28 Score=163.00 Aligned_cols=62 Identities=11% Similarity=0.175 Sum_probs=40.8
Q ss_pred cccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHH
Q 041026 6 LVHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIA 69 (149)
Q Consensus 6 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll 69 (149)
.++.+|..|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..++.+++++|+
T Consensus 37 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~--~~~~~~~g~tpL~~A~~~~~~~~v~~Ll 98 (282)
T 1oy3_D 37 YLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG--VLVAERGGHTALHLACRVRAHTCACVLL 98 (282)
T ss_dssp GGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC--SSCCCTTSCCHHHHHTTTTCHHHHHHHS
T ss_pred cccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--CCCCCCCCCCHHHHHHHcCCcchhHhhh
Confidence 3566677777777777777777777777777766 5555555556666555555555555555
No 37
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.96 E-value=6.8e-28 Score=159.66 Aligned_cols=129 Identities=20% Similarity=0.185 Sum_probs=98.0
Q ss_pred cccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcc------eecc
Q 041026 6 LVHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFF------INKT 79 (149)
Q Consensus 6 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~------~~~~ 79 (149)
.++.+|..|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..++.+++++|++. +.+ ++..
T Consensus 37 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~ 113 (236)
T 1ikn_D 37 FLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCD--PELRDFRGNTPLHLACEQGCLASVGVLTQS-CTTPHLHSILKAT 113 (236)
T ss_dssp CCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCC--SCCCCTTCCCHHHHHHHHTCHHHHHHHHHS-TTTTSSSCGGGCC
T ss_pred HhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--CCCcCCCCCCHHHHHHHcCCHHHHHHHHhc-ccchhHHHHhhcc
Confidence 3566777888888888888888888888888777 777777888888888888888888888853 332 4566
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccC-CCCCHHHHHHHcCCHHHHHhhhh
Q 041026 80 NNQGDTPLHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENA-MGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 80 ~~~g~tplh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~-~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
+..|.||||+|+..|+.+++++|++.| ++++ .++. .|.||||+|+..|+.+++++|.+
T Consensus 114 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~------~~~~~~g~tpL~~A~~~~~~~~v~~Ll~ 172 (236)
T 1ikn_D 114 NYNGHTCLHLASIHGYLGIVELLVSLG-----ADVN------AQEPCNGRTALHLAVDLQNPDLVSLLLK 172 (236)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHHT-----CCTT------CCCTTTCCCHHHHHHHTTCHHHHHHHHT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCC------CCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 777888888888888888888888877 6655 5665 77788888888888888777754
No 38
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=1.5e-28 Score=162.65 Aligned_cols=130 Identities=15% Similarity=0.063 Sum_probs=119.3
Q ss_pred ccccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCC
Q 041026 5 NLVHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGD 84 (149)
Q Consensus 5 ~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~ 84 (149)
+..+..+.++.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..|+.+++++|++ .|++++.+|..|.
T Consensus 12 ~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~-~ga~~n~~d~~g~ 88 (229)
T 2vge_A 12 RKARRARLNPLVLLLDAALTGELEVVQQAVKEMND--PSQPNEEGITALHNAICGANYSIVDFLIT-AGANVNSPDSHGW 88 (229)
T ss_dssp CCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTCC
T ss_pred ccccccccchhHHHHHHHHcCCHHHHHHHHhcCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCC
Confidence 34556677889999999999999999999999998 88999999999999999999999999995 5899999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHHhhhcCCCCCCCCcccccccc-CCCCCHHHHH--HHcCCHHHHHhhhh
Q 041026 85 TPLHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMEN-AMGNTVLREA--LFMLGRVNVRRTNT 148 (149)
Q Consensus 85 tplh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~-~~g~t~l~~A--~~~~~~~~~~~L~~ 148 (149)
||||+|+..|+.+++++|++.| ++++ .++ ..|.||||+| +..|+.+++++|.+
T Consensus 89 tpLh~A~~~g~~~~v~~Ll~~g-----a~~~------~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~ 144 (229)
T 2vge_A 89 TPLHCAASCNDTVICMALVQHG-----AAIF------ATTLSDGATAFEKCDPYREGYADCATYLAD 144 (229)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTT-----CCTT------CCCSSTTCCTGGGCCTTSTTHHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcC-----CCcc------cccCCCCCCHHHHHHHHhcChHHHHHHHHH
Confidence 9999999999999999999999 7776 564 6999999999 99999999999864
No 39
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=1.2e-27 Score=151.33 Aligned_cols=124 Identities=22% Similarity=0.162 Sum_probs=115.2
Q ss_pred CCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHHHHH
Q 041026 11 DTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPLHCA 90 (149)
Q Consensus 11 d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tplh~a 90 (149)
...+.++|++|++.|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|++ .+.+++..|..|.||||+|
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A 87 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGAD--VNAEDASGWTPLHLAAFNGHLEIVEVLLK-NGADVNAVDHAGMTPLRLA 87 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHH
Confidence 35678899999999999999999999998 88899999999999999999999999995 5899999999999999999
Q ss_pred HHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 91 ARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 91 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
+..|+.+++++|++.| ++++ .++..|.||||+|+..|+.+++++|.+
T Consensus 88 ~~~~~~~~~~~Ll~~g-----~~~~------~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 134 (169)
T 2y1l_E 88 ALFGHLEIVEVLLKNG-----ADVN------ANDMEGHTPLHLAAMFGHLEIVEVLLK 134 (169)
T ss_dssp HHTTCHHHHHHHHHTT-----CCTT------CCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcC-----CCCC------CCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 9999999999999998 7776 788999999999999999999999875
No 40
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.96 E-value=9e-28 Score=162.32 Aligned_cols=142 Identities=20% Similarity=0.138 Sum_probs=117.4
Q ss_pred cccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCC-ccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCC
Q 041026 6 LVHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSG-ISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGD 84 (149)
Q Consensus 6 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~ 84 (149)
+++.+|.+|.||||+|+..|+.+++++|++.++.. .++..+..|.||||+|+..|+.+++++|++ .|++++.++..|.
T Consensus 1 i~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~g~ 79 (282)
T 1oy3_D 1 VFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYA-AGAGVLVAERGGH 79 (282)
T ss_dssp CCCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCSSCCCTTSC
T ss_pred CCCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCC
Confidence 46789999999999999999999999999988762 256788899999999999999999999995 6899999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHHhhhcCCCCCC------------------------------------CCccccccccCCCC
Q 041026 85 TPLHCAARAGKLNTATVLVDFAKHIPSTSQ------------------------------------PPVDLLRMENAMGN 128 (149)
Q Consensus 85 tplh~a~~~g~~~~v~~Ll~~~~~~~~~~~------------------------------------~~~~~~~~~~~~g~ 128 (149)
||||+|+..|+.+++++|++.+........ .....++.++..|.
T Consensus 80 tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 159 (282)
T 1oy3_D 80 TALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGH 159 (282)
T ss_dssp CHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSC
T ss_pred CHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCc
Confidence 999999999999999999998733110000 00123456777888
Q ss_pred CHHHHHHHcCCHHHHHhhhh
Q 041026 129 TVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 129 t~l~~A~~~~~~~~~~~L~~ 148 (149)
||||+|+..|+.+++++|.+
T Consensus 160 t~L~~A~~~g~~~~v~~Ll~ 179 (282)
T 1oy3_D 160 TPLHVAVIHKDAEMVRLLRD 179 (282)
T ss_dssp CHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHH
Confidence 88888888888888887753
No 41
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.95 E-value=3.8e-29 Score=160.70 Aligned_cols=127 Identities=9% Similarity=-0.029 Sum_probs=113.5
Q ss_pred cccC-CCCCCHHHHHHHhCCH----HHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCc------HHHHHHHHHhCCcce
Q 041026 8 HLND-TTNKSPLSLAIEMENT----DVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGH------GEISAKIAQYYPFFI 76 (149)
Q Consensus 8 ~~~d-~~g~t~l~~a~~~~~~----~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~------~~~~~~Ll~~~~~~~ 76 (149)
+..+ ..|.||||+|+..++. +++++|++.|++ ++.++..|+||||+|+..++ .+++++|++ .|+++
T Consensus 31 ~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gad--vn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~-~Gadi 107 (186)
T 3t8k_A 31 EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGAD--IKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLE-KGADI 107 (186)
T ss_dssp SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCC--SSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHH-TTCCS
T ss_pred ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCC--CCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHH-CCCCC
Confidence 3444 6799999999999975 489999999999 99999999999999999986 578999995 69999
Q ss_pred ecccCCCC-cHHHHHHHcC-----CHHHHHHHHH-hhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 77 NKTNNQGD-TPLHCAARAG-----KLNTATVLVD-FAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 77 ~~~~~~g~-tplh~a~~~g-----~~~~v~~Ll~-~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
+.+|..|. ||||+|+..+ +.+++++|++ .| ++++ .+|..|.||||+|++.|+.+++++|+.
T Consensus 108 n~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~g-----ad~~------~~d~~G~TpL~~A~~~~~~~~v~~L~~ 175 (186)
T 3t8k_A 108 TALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSG-----LQLL------IKDKWGLTALEFVKRCQKPIALKMMED 175 (186)
T ss_dssp SSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTT-----CCTT------CCCTTSCCHHHHHHTTTCHHHHHHHHH
T ss_pred CccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcC-----CCCc------ccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 99999999 9999999844 3569999999 78 8777 899999999999999999999999874
No 42
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.95 E-value=4.1e-27 Score=154.85 Aligned_cols=133 Identities=19% Similarity=0.186 Sum_probs=71.6
Q ss_pred ccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCcccc-CCCCCCcHHHHHHHhCcHHHHHHHHHhCC--cceecccCCCCc
Q 041026 9 LNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWS-SGKSPFSLLDVAAKYGHGEISAKIAQYYP--FFINKTNNQGDT 85 (149)
Q Consensus 9 ~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~-~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~--~~~~~~~~~g~t 85 (149)
.+|..|.||||+|+..|+.+++++|++.+++.+++. .+..|.||||+|+..++.+++++|++ .+ .+++..+..|.|
T Consensus 31 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~~g~t 109 (228)
T 2dzn_A 31 QKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYD-RPLKPDLNKITNQGVT 109 (228)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHS-SSSCCCTTCCCTTCCC
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHh-CCCCcccccCCcCCCC
Confidence 355556666666666666666666666553211333 45555555555555555555555553 23 445555555555
Q ss_pred HHHHHHHcCCHHHHHHHHHhhhcCCCCCCCC----------------------------ccccccccCCCCCHHHHHHHc
Q 041026 86 PLHCAARAGKLNTATVLVDFAKHIPSTSQPP----------------------------VDLLRMENAMGNTVLREALFM 137 (149)
Q Consensus 86 plh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~----------------------------~~~~~~~~~~g~t~l~~A~~~ 137 (149)
|||+|+..|+.+++++|++.| ++++. ..+++.++..|.||||+|+..
T Consensus 110 ~L~~A~~~~~~~~~~~Ll~~g-----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~ 184 (228)
T 2dzn_A 110 CLHLAVGKKWFEVSQFLIENG-----ASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE 184 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHTT-----CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHT
T ss_pred HHHHHHHcCCHhHHHHHHHcC-----CCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHc
Confidence 555555555555555555555 33330 122335556666666666666
Q ss_pred CCHHHHHhhh
Q 041026 138 LGRVNVRRTN 147 (149)
Q Consensus 138 ~~~~~~~~L~ 147 (149)
|+.+++++|.
T Consensus 185 ~~~~~v~~Ll 194 (228)
T 2dzn_A 185 GHGDAAVLLV 194 (228)
T ss_dssp TCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 6666666554
No 43
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=7.4e-28 Score=151.55 Aligned_cols=126 Identities=16% Similarity=0.094 Sum_probs=114.5
Q ss_pred cCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHHHH
Q 041026 10 NDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPLHC 89 (149)
Q Consensus 10 ~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tplh~ 89 (149)
.|.+|.++|+.|++.|+.+++++|++.... ..+..+..|.||||+|+..++.+++++|++ .+.+++.+|..|.||||+
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~ 81 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSV-NCRDIEGRQSTPLHFAAGYNRVSVVEYLLQ-HGADVHAKDKGGLVPLHN 81 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTT-TCCCTTTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCC-CccccccCCCCHHHHHHHcChHHHHHHHHh-cCCCCCccCCCCCCHHHH
Confidence 467889999999999999999999986553 366778889999999999999999999995 589999999999999999
Q ss_pred HHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 90 AARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 90 a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
|+..|+.+++++|++.| ++++ .++..|.||||+|+..|+.+++++|.+
T Consensus 82 A~~~~~~~~v~~Ll~~g-----~~~~------~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 129 (165)
T 3twr_A 82 ACSYGHYEVAELLVKHG-----AVVN------VADLWKFTPLHEAAAKGKYEICKLLLQ 129 (165)
T ss_dssp HHHTTCHHHHHHHHHTT-----CCTT------CCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHcCcHHHHHHHHhCC-----CCCC------CcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 99999999999999998 7777 789999999999999999999999875
No 44
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.95 E-value=4.7e-28 Score=164.83 Aligned_cols=127 Identities=17% Similarity=0.064 Sum_probs=111.9
Q ss_pred cccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCc
Q 041026 6 LVHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDT 85 (149)
Q Consensus 6 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 85 (149)
.++.+|.+|.||||+|+..|+.+++++|++.+++ ++.. .|.||||+|+..|+.+++++|++ .|++++.+|..|.|
T Consensus 23 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~--~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~t 97 (285)
T 3kea_A 23 DTFKADVHGHSASYYAIADNNVRLVCTLLNAGAL--KNLL--ENEFPLHQAATLEDTKIVKILLF-SGLDDSQFDDKGNT 97 (285)
T ss_dssp TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGG--GSCC--TTCCHHHHHTTSSSCHHHHHHHH-TTCCTTCCCTTSCC
T ss_pred CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC--CCCC--CCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCc
Confidence 3678899999999999999999999999999887 6665 48999999999999999999995 58999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCC-CCHHHHHHHcCCHHHHHhhhh
Q 041026 86 PLHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMG-NTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 86 plh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g-~t~l~~A~~~~~~~~~~~L~~ 148 (149)
|||+|+..|+.+++++|+++| ++++ .++..| .||||+|+..|+.+++++|.+
T Consensus 98 ~L~~A~~~g~~~~v~~Ll~~g-----a~~~------~~~~~g~~t~L~~A~~~~~~~~v~~Ll~ 150 (285)
T 3kea_A 98 ALYYAVDSGNMQTVKLFVKKN-----WRLM------FYGKTGWKTSFYHAVMLNDVSIVSYFLS 150 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHHC-----GGGG------GCSSSGGGSHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHhcC-----CCCC------ccCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 999999999999999999998 6555 677788 788888888888888888764
No 45
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.95 E-value=3.3e-27 Score=160.99 Aligned_cols=128 Identities=18% Similarity=0.186 Sum_probs=109.4
Q ss_pred ccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceeccc------
Q 041026 7 VHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTN------ 80 (149)
Q Consensus 7 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~------ 80 (149)
++..|.+|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..|+.+++++|++ .|++++..+
T Consensus 66 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~--~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~ 142 (299)
T 1s70_B 66 INYANVDGLTALHQACIDDNVDMVKFLVENGAN--INQPDNEGWIPLHAAASCGYLDIAEYLIS-QGAHVGAVNSEGDTP 142 (299)
T ss_dssp TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCH
T ss_pred CcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC--CCCCCCCCCcHHHHHHHcCCHHHHHHHHh-CCCCCCCcCCCCCCH
Confidence 566788899999999999999999999999888 88888889999999999999999999985 466554433
Q ss_pred ------------------------------------------------------CCCCcHHHHHHHcCCHHHHHHHHHhh
Q 041026 81 ------------------------------------------------------NQGDTPLHCAARAGKLNTATVLVDFA 106 (149)
Q Consensus 81 ------------------------------------------------------~~g~tplh~a~~~g~~~~v~~Ll~~~ 106 (149)
..|.||||+|+..|+.+++++|++.|
T Consensus 143 l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 222 (299)
T 1s70_B 143 LDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQAR 222 (299)
T ss_dssp HHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTT
T ss_pred HHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcC
Confidence 35778888889999999999999888
Q ss_pred hcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 107 KHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
++++ .+|..|.||||+|+..|+.+++++|.+
T Consensus 223 -----~d~~------~~d~~g~tpL~~A~~~~~~~~v~~Ll~ 253 (299)
T 1s70_B 223 -----YDVN------IKDYDGWTPLHAAAHWGKEEACRILVE 253 (299)
T ss_dssp -----CCTT------CCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred -----CCCC------CcCCCCCcHHHHHHhcCCHHHHHHHHH
Confidence 7776 789999999999999999999999865
No 46
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.95 E-value=4.3e-27 Score=154.74 Aligned_cols=126 Identities=19% Similarity=0.114 Sum_probs=110.8
Q ss_pred cccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCc
Q 041026 6 LVHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDT 85 (149)
Q Consensus 6 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 85 (149)
.++.+|..|.||||+|+..|+.+++++|++.+++ ++.++..|.||||+|+..++.+++++|++..+.+++.+|..|.|
T Consensus 99 ~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t 176 (228)
T 2dzn_A 99 DLNKITNQGVTCLHLAVGKKWFEVSQFLIENGAS--VRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWT 176 (228)
T ss_dssp CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC--SCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCC
T ss_pred ccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCC--ccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCC
Confidence 3566788899999999999999999999999988 88889999999999999999999999996533889999999999
Q ss_pred HHHHHHHcCCHHHHHHHH-HhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhh
Q 041026 86 PLHCAARAGKLNTATVLV-DFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTN 147 (149)
Q Consensus 86 plh~a~~~g~~~~v~~Ll-~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~ 147 (149)
|||+|+..|+.+++++|+ +.| ++++ .+|..|.||+++|+.. +++++|.
T Consensus 177 ~L~~A~~~~~~~~v~~Ll~~~g-----a~~~------~~~~~g~t~l~~A~~~---~~~~~l~ 225 (228)
T 2dzn_A 177 PLFHALAEGHGDAAVLLVEKYG-----AEYD------LVDNKGAKAEDVALNE---QVKKFFL 225 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHC-----CCSC------CBCTTSCBGGGGCSST---THHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHhcC-----CCCC------ccCCCCCcHHHHHHHH---HHHHHHH
Confidence 999999999999999999 777 7777 8999999999999655 5566554
No 47
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.95 E-value=6.7e-28 Score=168.72 Aligned_cols=127 Identities=14% Similarity=0.126 Sum_probs=119.2
Q ss_pred cccCCCCCCHHHHHHHhC--CHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcc-----eeccc
Q 041026 8 HLNDTTNKSPLSLAIEME--NTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFF-----INKTN 80 (149)
Q Consensus 8 ~~~d~~g~t~l~~a~~~~--~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~-----~~~~~ 80 (149)
+.+|..|.||||+|+..| +.+++++|++.+++ ++..+..|.||||+|+..|+.+++++|++. +.+ ++..|
T Consensus 132 ~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~--~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~ 208 (364)
T 3ljn_A 132 HVKHCKGQTALHWCVGLGPEYLEMIKILVQLGAS--PTAKDKADETPLMRAMEFRNREALDLMMDT-VPSKSSLRLDYAN 208 (364)
T ss_dssp EEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-CSCSSSCCTTCCC
T ss_pred ccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCC--CcccCCCCCCHHHHHHHcCCHHHHHHHHhc-ccccccccccccC
Confidence 347889999999999999 99999999999999 899999999999999999999999999964 666 88999
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 81 NQGDTPLHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 81 ~~g~tplh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
..|.||||+|+..|+.+++++|+++| ++++ .+|..|.||||+|+..|+.+++++|.+
T Consensus 209 ~~g~t~L~~A~~~g~~~~v~~Ll~~g-----ad~~------~~d~~g~tpL~~A~~~g~~~~v~~Ll~ 265 (364)
T 3ljn_A 209 KQGNSHLHWAILINWEDVAMRFVEMG-----IDVN------MEDNEHTVPLYLSVRAAMVLLTKELLQ 265 (364)
T ss_dssp TTCCCTTHHHHTTTCHHHHHHHHTTT-----CCTT------CCCTTSCCHHHHHHHTCCHHHHHHHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcC-----CCCC------CCCCCCCCHHHHHHHhChHHHHHHHHH
Confidence 99999999999999999999999999 8777 899999999999999999999999874
No 48
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.95 E-value=2.4e-28 Score=165.15 Aligned_cols=124 Identities=23% Similarity=0.160 Sum_probs=114.5
Q ss_pred ccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcH
Q 041026 7 VHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTP 86 (149)
Q Consensus 7 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tp 86 (149)
++.++.+|.||+++|+..++.+++++|++.+++ ++.++..|.||||+|+..|+.+++++|++ .|++++.++..|.||
T Consensus 112 ~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~--~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~-~gadvn~~~~~g~t~ 188 (269)
T 4b93_B 112 AGARNADQAVPLHLACQQGHFQVVKCLLDSNAK--PNKKDLSGNTPLIYACSGGHHELVALLLQ-HGASINASNNKGNTA 188 (269)
T ss_dssp TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC--SCCCCTTCCCHHHHHHHTTCGGGHHHHHH-TTCCTTCBCTTSCBH
T ss_pred cCccCCCCCCccccccccChHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHCCCHHHHHHHHH-CCCCCCccccCCCcH
Confidence 466788999999999999999999999999999 89999999999999999999999999995 689999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhh
Q 041026 87 LHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRT 146 (149)
Q Consensus 87 lh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L 146 (149)
||+|+..|+.+++++|+++| ++++ .+|..|+||||+|+++++ ++++|
T Consensus 189 Lh~A~~~g~~~~v~~Ll~~G-----ad~~------~~d~~G~TpL~~A~~~~~--i~~lL 235 (269)
T 4b93_B 189 LHEAVIEKHVFVVELLLLHG-----ASVQ------VLNKRQRTAVDCAEQNSK--IMELL 235 (269)
T ss_dssp HHHHHHTTCHHHHHHHHHTT-----CCSC------CCCTTSCCSGGGSCTTCH--HHHHT
T ss_pred HHHHHHcCCHHHHHHHHHCC-----CCCC------CcCCCCCCHHHHHHhCCc--HHHHH
Confidence 99999999999999999999 8877 899999999999987664 45544
No 49
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.95 E-value=3.7e-27 Score=160.36 Aligned_cols=136 Identities=18% Similarity=0.057 Sum_probs=108.2
Q ss_pred ccccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCC
Q 041026 5 NLVHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGD 84 (149)
Q Consensus 5 ~~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~ 84 (149)
+.++.+|.+|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..|+.+++++|++ .+++++.+|..|.
T Consensus 50 ~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~g~ 126 (285)
T 3d9h_A 50 NPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWA--VNIITADHVSPLHEACLGGHLSCVKILLK-HGAQVNGVTADWH 126 (285)
T ss_dssp CTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCC--SCEECTTCCCHHHHHHHTTCHHHHHHHHH-TTCCSSCCCTTCC
T ss_pred CcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCC--CCCcCCCCCCHHHHHHHCCcHHHHHHHHH-CCCCCCCCCCCCC
Confidence 34567788899999999999999999999998888 88888889999999999999999999995 5888888899999
Q ss_pred cHHHHHHHcCCHHHHHHHHHhhhcCCCCCCCC--------------------------ccccccccCCCCCHHHHHHHcC
Q 041026 85 TPLHCAARAGKLNTATVLVDFAKHIPSTSQPP--------------------------VDLLRMENAMGNTVLREALFML 138 (149)
Q Consensus 85 tplh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~--------------------------~~~~~~~~~~g~t~l~~A~~~~ 138 (149)
||||+|+..|+.+++++|++.+ ++++. ...++.++..|.||||+|+..|
T Consensus 127 t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~ 201 (285)
T 3d9h_A 127 TPLFNACVSGSWDCVNLLLQHG-----ASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQ 201 (285)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTT-----CCSSCSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTT
T ss_pred CHHHHHHHcCHHHHHHHHHHCC-----CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcC
Confidence 9999999999999999999887 43331 2233456666666666666666
Q ss_pred CHHHHHhhhh
Q 041026 139 GRVNVRRTNT 148 (149)
Q Consensus 139 ~~~~~~~L~~ 148 (149)
+.+++++|.+
T Consensus 202 ~~~~v~~Ll~ 211 (285)
T 3d9h_A 202 QRACVKKLLE 211 (285)
T ss_dssp CHHHHHHHHH
T ss_pred cHHHHHHHHH
Confidence 6666666643
No 50
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=2.4e-27 Score=147.61 Aligned_cols=120 Identities=20% Similarity=0.122 Sum_probs=111.4
Q ss_pred CCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHHHHHHHc
Q 041026 14 NKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPLHCAARA 93 (149)
Q Consensus 14 g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tplh~a~~~ 93 (149)
..++|+.|++.|+.+++++|++.+++ .+ .+..|.||||+|+..|+.+++++|++ .+.+++.++..|.||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~--~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~ 77 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAP--FT-TDWLGTSPLHLAAQYGHFSTTEVLLR-AGVSRDARTKVDRTPLHMAASE 77 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCC--CC-CCTTCCCHHHHHHHHTCHHHHHHHHT-TTCCTTCCCTTCCCHHHHHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCC--CC-cCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHc
Confidence 45899999999999999999999988 54 58889999999999999999999995 6899999999999999999999
Q ss_pred CCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 94 GKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 94 g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
|+.+++++|+++| ++++ .++..|.||||+|+..|+.+++++|.+
T Consensus 78 ~~~~~v~~Ll~~g-----~~~~------~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 121 (153)
T 1awc_B 78 GHANIVEVLLKHG-----ADVN------AKDMLKMTALHWATEHNHQEVVELLIK 121 (153)
T ss_dssp TCHHHHHHHHTTT-----CCTT------CCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred ChHHHHHHHHHcC-----CCCC------CCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 9999999999998 7777 789999999999999999999999865
No 51
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=4.1e-27 Score=150.04 Aligned_cols=124 Identities=20% Similarity=0.146 Sum_probs=112.2
Q ss_pred CCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHHHHHH
Q 041026 12 TTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPLHCAA 91 (149)
Q Consensus 12 ~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tplh~a~ 91 (149)
.++.++|+.|+..|+.+++++|++.+.. +++..+..|.||||+|+..++.+++++|++ .+++++.+|..|.||||+|+
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~ 80 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTEN-DLNQGDDHGFSPLHWACREGRSAVVEMLIM-RGARINVMNRGDDTPLHLAA 80 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTS-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcc-cccccCCCCCCHHHHHHHcCcHHHHHHHHH-cCCCCCCcCCCCCCHHHHHH
Confidence 4688999999999999999999998554 478889999999999999999999999995 58999999999999999999
Q ss_pred HcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 92 RAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 92 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
..|+.+++++|++.| ++++ .++..|.||||+|+..++.+++++|.+
T Consensus 81 ~~~~~~~v~~Ll~~g-----~~~~------~~d~~g~t~L~~A~~~~~~~~v~~Ll~ 126 (179)
T 3f6q_A 81 SHGHRDIVQKLLQYK-----ADIN------AVNEHGNVPLHYACFWGQDQVAEDLVA 126 (179)
T ss_dssp HTTCHHHHHHHHHTT-----CCTT------CCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HcCCHHHHHHHHHcC-----CCCC------ccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 999999999999999 7777 789999999999999999999999875
No 52
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.95 E-value=1.1e-27 Score=165.94 Aligned_cols=140 Identities=15% Similarity=0.112 Sum_probs=117.5
Q ss_pred ccc-cCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCc---HHHHHHHHHhCCcceecccCC
Q 041026 7 VHL-NDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGH---GEISAKIAQYYPFFINKTNNQ 82 (149)
Q Consensus 7 ~~~-~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~---~~~~~~Ll~~~~~~~~~~~~~ 82 (149)
++. +|.+|.||||+|+..|+.+++++|++.+++ ++.++..|.||||+|+..|+ .++++.|++....+++.+|..
T Consensus 123 vn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad--~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~ 200 (327)
T 1sw6_A 123 LNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSN--RLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSM 200 (327)
T ss_dssp SCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCC--TTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTT
T ss_pred cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC--CCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCC
Confidence 455 799999999999999999999999999999 89999999999999999998 678888886655789999999
Q ss_pred CCcHHHHHHH----cCCHHHHHHHHHhhhc---------------CCCCCCCCc-------------------ccccccc
Q 041026 83 GDTPLHCAAR----AGKLNTATVLVDFAKH---------------IPSTSQPPV-------------------DLLRMEN 124 (149)
Q Consensus 83 g~tplh~a~~----~g~~~~v~~Ll~~~~~---------------~~~~~~~~~-------------------~~~~~~~ 124 (149)
|+||||+|+. .|+.+++++|++.+.. ..|++++.. ..++.++
T Consensus 201 g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d 280 (327)
T 1sw6_A 201 NRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQD 280 (327)
T ss_dssp CCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCC
T ss_pred CCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCC
Confidence 9999999999 8999999999988521 001222210 0366889
Q ss_pred CCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 125 AMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 125 ~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
..|+||||+|+..|+.+++++|.+
T Consensus 281 ~~G~TpLh~A~~~g~~~~v~~Ll~ 304 (327)
T 1sw6_A 281 SNGDTCLNIAARLGNISIVDALLD 304 (327)
T ss_dssp TTSCCHHHHHHHHCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHH
Confidence 999999999999999999999975
No 53
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.95 E-value=6.7e-27 Score=157.18 Aligned_cols=126 Identities=17% Similarity=0.094 Sum_probs=77.3
Q ss_pred ccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcH
Q 041026 7 VHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTP 86 (149)
Q Consensus 7 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tp 86 (149)
++.+|.+|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..|+.+++++|++ .+++++. +..|.||
T Consensus 29 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~-~~~g~t~ 104 (261)
T 2xai_A 29 VNIITADHVSPLHEACLGGHLSCVKILLKHGAQ--VNGVTADWHTPLFNACVSGSWDCVNLLLQ-HGASVQP-ESDLASP 104 (261)
T ss_dssp SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCSSC-SCTTCCH
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCC-CCCCCCH
Confidence 455666677777777777777777777777666 66666666666666666666666666664 3454443 3335566
Q ss_pred HHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhh
Q 041026 87 LHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTN 147 (149)
Q Consensus 87 lh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~ 147 (149)
||+|+..|+.+++++|++.| ++++ .++..|.||||+|+..|+.+++++|.
T Consensus 105 L~~A~~~~~~~~v~~Ll~~g-----~~~~------~~~~~g~t~L~~A~~~~~~~~v~~Ll 154 (261)
T 2xai_A 105 IHEAARRGHVECVNSLIAYG-----GNID------HKISHLGTPLYLACENQQRACVKKLL 154 (261)
T ss_dssp HHHHHHTTCHHHHHHHHHTT-----CCTT------CCBTTTBCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHcCcHHHHHHHHHcC-----CCCC------cCCCCCCCHHHHHHHhCCHHHHHHHH
Confidence 66666666666666666655 4444 45555555555555555555555553
No 54
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.95 E-value=6e-27 Score=155.14 Aligned_cols=97 Identities=14% Similarity=0.068 Sum_probs=51.2
Q ss_pred ccccCCCCCCHHHHHHHhCCHHHHHHHHH----hCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCC
Q 041026 7 VHLNDTTNKSPLSLAIEMENTDVLEYILR----SLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQ 82 (149)
Q Consensus 7 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~----~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~ 82 (149)
++.+|.+|.||||+|+..|+.+++++|++ .+.+ ++..+..|.||||+|+..|+.+++++|++ .|.+++.++..
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~ 78 (241)
T 1k1a_A 2 ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRE--LDIYNNLRQTPLHLAVITTLPSVVRLLVT-AGASPMALDRH 78 (241)
T ss_dssp -----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCC--SCCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTT
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCC--CCcccccCCCHHHHHHHcCCHHHHHHHHH-cCCCccccCCC
Confidence 34455555555555555555555555554 3333 45555555555555555555555555553 35555555555
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhh
Q 041026 83 GDTPLHCAARAGKLNTATVLVDFA 106 (149)
Q Consensus 83 g~tplh~a~~~g~~~~v~~Ll~~~ 106 (149)
|.||||+|+..|+.+++++|++.+
T Consensus 79 g~t~l~~A~~~~~~~~~~~Ll~~~ 102 (241)
T 1k1a_A 79 GQTAAHLACEHRSPTCLRALLDSA 102 (241)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHS
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcC
Confidence 555555555555555555555554
No 55
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=3.2e-27 Score=149.54 Aligned_cols=122 Identities=15% Similarity=0.059 Sum_probs=112.4
Q ss_pred CCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHHHHHHHc
Q 041026 14 NKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPLHCAARA 93 (149)
Q Consensus 14 g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tplh~a~~~ 93 (149)
+.+|||.|+..|+.+.++++++.+.. .++..+..|.||||+|+..++.+++++|++ .+++++.++..|.||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~ 79 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDN-LVNKPDERGFTPLIWASAFGEIETVRFLLE-WGADPHILAKERESALSLASTG 79 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSG-GGGCCCTTSCCHHHHHHHTTCHHHHHHHHH-HTCCTTCCCTTCCCHHHHHHHT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcc-cccCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCchhhcccCCCHHHHHHHC
Confidence 57899999999999999999999876 567789999999999999999999999996 4899999999999999999999
Q ss_pred CCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 94 GKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 94 g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
|+.+++++|++++ ++++ .++..|.||||+|+..|+.+++++|.+
T Consensus 80 ~~~~~v~~Ll~~g-----~~~~------~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 123 (172)
T 3v30_A 80 GYTDIVGLLLERD-----VDIN------IYDWNGGTPLLYAVRGNHVKCVEALLA 123 (172)
T ss_dssp TCHHHHHHHHTTT-----CCTT------CCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHcC-----CCCC------CCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 9999999999998 7776 789999999999999999999999875
No 56
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.95 E-value=1.5e-27 Score=158.04 Aligned_cols=130 Identities=16% Similarity=0.111 Sum_probs=118.8
Q ss_pred ccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCC----CccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccC-
Q 041026 7 VHLNDTTNKSPLSLAIEMENTDVLEYILRSLPS----GISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNN- 81 (149)
Q Consensus 7 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~----~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~- 81 (149)
++.+|..|.||||+|+..|+.+++++|++.++. ...+..+..|.||||+|+..++.+++++|++ .|++++.++.
T Consensus 71 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~ 149 (236)
T 1ikn_D 71 PELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVS-LGADVNAQEPC 149 (236)
T ss_dssp SCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHH-HTCCTTCCCTT
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCC
Confidence 466789999999999999999999999999864 1246678889999999999999999999996 5899999987
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 82 QGDTPLHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 82 ~g~tplh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
.|.||||+|+..|+.+++++|+++| ++++ .++..|.||+++|+..++.+++++|.+
T Consensus 150 ~g~tpL~~A~~~~~~~~v~~Ll~~g-----a~~~------~~~~~g~tpl~~A~~~~~~~~~~~Ll~ 205 (236)
T 1ikn_D 150 NGRTALHLAVDLQNPDLVSLLLKCG-----ADVN------RVTYQGYSPYQLTWGRPSTRIQQQLGQ 205 (236)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHTTT-----CCSC------CCCTTCCCGGGGCTTSSCHHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcC-----CCCC------cccCCCCCHHHHHHccCchHHHHHHHH
Confidence 9999999999999999999999998 8777 789999999999999999999999875
No 57
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.95 E-value=1.4e-27 Score=149.67 Aligned_cols=122 Identities=21% Similarity=0.135 Sum_probs=113.1
Q ss_pred CCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHHHHHH
Q 041026 12 TTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPLHCAA 91 (149)
Q Consensus 12 ~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tplh~a~ 91 (149)
....||||.|+..|+.+++++|++.+.+ ++..+..|.||||+|+. ++.+++++|++ .+.+++.++..|.||||+|+
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~--~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~ 78 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNNVN--VNAQNGFGRTALQVMKL-GNPEIARRLLL-RGANPDLKDRTGFAVIHDAA 78 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSCCC--TTCCCTTSCCHHHHCCS-SCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCCCC--ccccCccCccHHHHHHc-CcHHHHHHHHH-cCCCCCCCCCCCCCHHHHHH
Confidence 4567999999999999999999999988 88899999999999999 99999999995 58999999999999999999
Q ss_pred HcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 92 RAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 92 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
..|+.+++++|++.| ++++ .++..|.||||+|+..|+.+++++|.+
T Consensus 79 ~~~~~~~v~~Ll~~g-----~~~~------~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 124 (162)
T 1ihb_A 79 RAGFLDTLQTLLEFQ-----ADVN------IEDNEGNLPLHLAAKEGHLRVVEFLVK 124 (162)
T ss_dssp HHTCHHHHHHHHHTT-----CCTT------CCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HcCCHHHHHHHHHcC-----CCCC------CcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 999999999999998 7777 789999999999999999999999864
No 58
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.95 E-value=8.6e-27 Score=154.22 Aligned_cols=24 Identities=21% Similarity=-0.099 Sum_probs=10.4
Q ss_pred ccCCCCCHHHHHHHcCCHHHHHhh
Q 041026 123 ENAMGNTVLREALFMLGRVNVRRT 146 (149)
Q Consensus 123 ~~~~g~t~l~~A~~~~~~~~~~~L 146 (149)
++..|.||||+|+..++.+++++|
T Consensus 173 ~~~~g~t~L~~A~~~~~~~~v~~L 196 (237)
T 3b7b_A 173 VNIHGDSPLHIAARENRYDCVVLF 196 (237)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred cCCCCCCHHHHHHHhCCHhHHHHH
Confidence 344444444444444444444443
No 59
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.95 E-value=1e-26 Score=153.82 Aligned_cols=96 Identities=20% Similarity=0.261 Sum_probs=59.3
Q ss_pred cccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHH
Q 041026 8 HLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPL 87 (149)
Q Consensus 8 ~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tpl 87 (149)
+.+|.+|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..|+.+++++|++ .+.+++.++..|.|||
T Consensus 5 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L 81 (237)
T 3b7b_A 5 KMEHQNKRSPLHAAAEAGHVDICHMLVQAGAN--IDTCSEDQRTPLMEAAENNHLEAVKYLIK-AGALVDPKDAEGSTCL 81 (237)
T ss_dssp CCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHHTTCHHHHHHHHT-TTCCCCCCCTTSCCHH
T ss_pred ccccCCCCCHHHHHHHcCcHHHHHHHHHcCCC--cCccCCCCCCHHHHHHHhCCHHHHHHHHh-CCCCCCCCCCCCCcHH
Confidence 44556666666666666666666666666655 55555666666666666666666666663 3555555666666666
Q ss_pred HHHHHcCCHHHHHHHHHhh
Q 041026 88 HCAARAGKLNTATVLVDFA 106 (149)
Q Consensus 88 h~a~~~g~~~~v~~Ll~~~ 106 (149)
|+|+..|+.+++++|++.+
T Consensus 82 ~~A~~~~~~~~~~~Ll~~~ 100 (237)
T 3b7b_A 82 HLAAKKGHYEVVQYLLSNG 100 (237)
T ss_dssp HHHHHTTCHHHHHHHHTTT
T ss_pred HHHHHcCCHHHHHHHHhCC
Confidence 6666666666666666554
No 60
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.95 E-value=6.6e-28 Score=154.37 Aligned_cols=123 Identities=17% Similarity=0.099 Sum_probs=110.7
Q ss_pred CCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceeccc-CCCCcHHHH
Q 041026 11 DTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTN-NQGDTPLHC 89 (149)
Q Consensus 11 d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~-~~g~tplh~ 89 (149)
+.+|.||||+|+..|+.+++++|++ +.+ ++..+..|.||||+|+..|+.+++++|++ .+++++.++ ..|+||||+
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~--~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~~g~tpL~~ 116 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRD--VDAVDENGRTALLFVAGLGSDKCVRLLAE-AGADLDHRDMRGGLTALHM 116 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSC--TTCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCSSSSCCHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCC--CCCcCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCcCCCCCCCCHHHH
Confidence 5688999999999999999999999 777 88999999999999999999999999995 689999888 889999999
Q ss_pred HHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHc----------------CCHHHHHhhhh
Q 041026 90 AARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFM----------------LGRVNVRRTNT 148 (149)
Q Consensus 90 a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~----------------~~~~~~~~L~~ 148 (149)
|+..|+.+++++|+++| ++++ .+|..|.||||+|+.. |+.+++++|+.
T Consensus 117 A~~~~~~~~v~~Ll~~g-----a~~~------~~d~~g~tpl~~A~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~ 180 (183)
T 3deo_A 117 AAGYVRPEVVEALVELG-----ADIE------VEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEG 180 (183)
T ss_dssp HHHTTCHHHHHHHHHHT-----CCTT------CCCTTSCCHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHHHHHT
T ss_pred HHhcCcHHHHHHHHHcC-----CCCc------CCCCCCCCHHHHHHHhccCcccccHHHHHHHcCHHHHHHHHHH
Confidence 99999999999999999 7777 7889999999888775 56677777653
No 61
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.95 E-value=7.3e-27 Score=156.99 Aligned_cols=121 Identities=17% Similarity=0.034 Sum_probs=111.6
Q ss_pred CCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHHHHHHH
Q 041026 13 TNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPLHCAAR 92 (149)
Q Consensus 13 ~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tplh~a~~ 92 (149)
+|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+.
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~ 78 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWA--VNIITADHVSPLHEACLGGHLSCVKILLK-HGAQVNGVTADWHTPLFNACV 78 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC--SSCCCTTCCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCC--CCCcCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHH
Confidence 689999999999999999999999988 89999999999999999999999999995 589999999999999999999
Q ss_pred cCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 93 AGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 93 ~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
.|+.+++++|++.| ++.+ .+..|.||||+|+..|+.+++++|.+
T Consensus 79 ~~~~~~v~~Ll~~g-----~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~ 122 (261)
T 2xai_A 79 SGSWDCVNLLLQHG-----ASVQ-------PESDLASPIHEAARRGHVECVNSLIA 122 (261)
T ss_dssp HTCHHHHHHHHHTT-----CCSS-------CSCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHCC-----CCCC-------CCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 99999999999999 6665 34569999999999999999999864
No 62
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.95 E-value=1.4e-26 Score=153.30 Aligned_cols=98 Identities=15% Similarity=0.182 Sum_probs=58.0
Q ss_pred ccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCC---cceecccCCC
Q 041026 7 VHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYP---FFINKTNNQG 83 (149)
Q Consensus 7 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~---~~~~~~~~~g 83 (149)
++.+|..|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..++.+++++|++... .+++..+..|
T Consensus 39 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g 116 (241)
T 1k1a_A 39 LDIYNNLRQTPLHLAVITTLPSVVRLLVTAGAS--PMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDG 116 (241)
T ss_dssp SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTS
T ss_pred CCcccccCCCHHHHHHHcCCHHHHHHHHHcCCC--ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCC
Confidence 455566666666666666666666666666665 55555566666666666666666666664321 1444555555
Q ss_pred CcHHHHHHHcCCHHHHHHHHHhh
Q 041026 84 DTPLHCAARAGKLNTATVLVDFA 106 (149)
Q Consensus 84 ~tplh~a~~~g~~~~v~~Ll~~~ 106 (149)
.||||+|+..|+.+++++|++.|
T Consensus 117 ~t~L~~A~~~~~~~~~~~Ll~~g 139 (241)
T 1k1a_A 117 LTALHVAVNTECQETVQLLLERG 139 (241)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CcHHHHHHHcCCHHHHHHHHHcC
Confidence 55555555555555555555555
No 63
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.95 E-value=5.5e-27 Score=164.88 Aligned_cols=130 Identities=15% Similarity=0.069 Sum_probs=119.4
Q ss_pred cccccCCCCCCHHHHHHHhC---CHHHHHHHHHhCCCCcccc--------CCCCCCcHHHHHHHhCcHHHHHHHHHhCCc
Q 041026 6 LVHLNDTTNKSPLSLAIEME---NTDVLEYILRSLPSGISWS--------SGKSPFSLLDVAAKYGHGEISAKIAQYYPF 74 (149)
Q Consensus 6 ~~~~~d~~g~t~l~~a~~~~---~~~~~~~ll~~~~~~~~~~--------~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~ 74 (149)
.++..|..|.||||+|+..+ +.+++++|++.+++ ++. .+..|.||||+|+..|+.+++++|++..++
T Consensus 227 ~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~--~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~ 304 (373)
T 2fo1_E 227 DIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAK--VDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGS 304 (373)
T ss_dssp TTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCC--SSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCC
T ss_pred ChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCC--cccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCC
Confidence 45677899999999999988 89999999999988 543 567899999999999999999999987779
Q ss_pred ceecccCCCCcHHHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 75 FINKTNNQGDTPLHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 75 ~~~~~~~~g~tplh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
+++.+|..|.||||+|+..|+.+++++|+++| ++++ .+|..|.|||++|+..|+.+++++|.+
T Consensus 305 ~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g-----ad~~------~~d~~g~t~l~~A~~~g~~~iv~~Ll~ 367 (373)
T 2fo1_E 305 NKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQG-----ASVE------AVDATDHTARQLAQANNHHNIVDIFDR 367 (373)
T ss_dssp CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-----CCSS------CCCSSSCCHHHHHHHTTCHHHHHHHHT
T ss_pred CccCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCcc------CCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 99999999999999999999999999999999 8777 789999999999999999999999975
No 64
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.95 E-value=1.2e-26 Score=157.79 Aligned_cols=124 Identities=16% Similarity=0.057 Sum_probs=80.0
Q ss_pred ccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHHH
Q 041026 9 LNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPLH 88 (149)
Q Consensus 9 ~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tplh 88 (149)
.+|..|.||||+|+..|+.+++++|++.+++ ++. +..|.||||+|+..|+.+++++|++ .+.+++.+|..|.||||
T Consensus 120 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~d~~g~t~L~ 195 (285)
T 3d9h_A 120 GVTADWHTPLFNACVSGSWDCVNLLLQHGAS--VQP-ESDLASPIHEAARRGHVECVNSLIA-YGGNIDHKISHLGTPLY 195 (285)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC--SSC-SCTTSCHHHHHHHHTCHHHHHHHHH-TTCCTTCCBTTTBCHHH
T ss_pred CCCCCCCCHHHHHHHcCHHHHHHHHHHCCCC--CCC-CCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHH
Confidence 3444444555555444445555555444444 322 2225555555555555555555553 45666666777777777
Q ss_pred HHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 89 CAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 89 ~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
+|+..|+.+++++|++.| ++++ .+..|.||||+|+..++.+++++|.+
T Consensus 196 ~A~~~~~~~~v~~Ll~~g-----a~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~ 243 (285)
T 3d9h_A 196 LACENQQRACVKKLLESG-----ADVN-------QGKGQDSPLHAVVRTASEELACLLMD 243 (285)
T ss_dssp HHHHTTCHHHHHHHHHTT-----CCTT-------CCBTTBCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHcCcHHHHHHHHHCC-----CCCC-------CCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 777777777777777776 5555 47889999999999999999999875
No 65
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.95 E-value=6.6e-27 Score=167.08 Aligned_cols=128 Identities=24% Similarity=0.241 Sum_probs=99.5
Q ss_pred cccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCc
Q 041026 6 LVHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDT 85 (149)
Q Consensus 6 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 85 (149)
.++..|..|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..|+.+++++|++. +++++.++..|.|
T Consensus 6 ~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~--~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t 82 (437)
T 1n11_A 6 SGGGGGESGLTPLHVASFMGHLPIVKNLLQRGAS--PNVSNVKVETPLHMAARAGHTEVAKYLLQN-KAKVNAKAKDDQT 82 (437)
T ss_dssp ---------CCHHHHHHHHTCHHHHHHHHHTTCC--SCCSSSCCCCHHHHHHHHTCHHHHHHHHHH-TCCSSCCCTTSCC
T ss_pred CccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCCCCCCCCCCC
Confidence 4577888999999999999999999999999888 788888899999999999999999999964 7888889999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhh
Q 041026 86 PLHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTN 147 (149)
Q Consensus 86 plh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~ 147 (149)
|||+|+..|+.+++++|+++| ++++ ..+..|.||||+|+..|+.+++++|.
T Consensus 83 ~L~~A~~~g~~~~v~~Ll~~g-----a~~~------~~~~~g~t~L~~A~~~g~~~~v~~Ll 133 (437)
T 1n11_A 83 PLHCAARIGHTNMVKLLLENN-----ANPN------LATTAGHTPLHIAAREGHVETVLALL 133 (437)
T ss_dssp HHHHHHHHTCHHHHHHHHHHT-----CCTT------CCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHhCC-----CCCC------CCCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 999999999999999999988 6555 55666666666666666666666554
No 66
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.95 E-value=2.5e-27 Score=158.63 Aligned_cols=125 Identities=18% Similarity=0.088 Sum_probs=112.5
Q ss_pred cCCCCCCHHHHHHHh---CCHHHHHHHHHhCCCCccc-----------cCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcc
Q 041026 10 NDTTNKSPLSLAIEM---ENTDVLEYILRSLPSGISW-----------SSGKSPFSLLDVAAKYGHGEISAKIAQYYPFF 75 (149)
Q Consensus 10 ~d~~g~t~l~~a~~~---~~~~~~~~ll~~~~~~~~~-----------~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~ 75 (149)
+|.+|.||||+|+.. |+.+++++|++.+++ .+ ..+..|.||||+|+..|+.+++++|++ .|++
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~--~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~ 115 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKD--SGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVE-NGAD 115 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHH--TTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHH-TTCC
T ss_pred CCCCCCCHHHHHHHccccchHHHHHHHHhcCCc--ccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHH-cCCC
Confidence 789999999999999 999999999999876 33 234679999999999999999999995 5899
Q ss_pred eecccCC-------------CCcHHHHHHHcCCHHHHHHHHH---hhhcCCCCCCCCccccccccCCCCCHHHHHHH--c
Q 041026 76 INKTNNQ-------------GDTPLHCAARAGKLNTATVLVD---FAKHIPSTSQPPVDLLRMENAMGNTVLREALF--M 137 (149)
Q Consensus 76 ~~~~~~~-------------g~tplh~a~~~g~~~~v~~Ll~---~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~--~ 137 (149)
++.++.. |.||||+|+..|+.+++++|++ .| ++++ .+|..|+||||+|+. .
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~g-----a~~n------~~d~~g~TpLh~A~~~~~ 184 (256)
T 2etb_A 116 VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQP-----ASLE------ATDSLGNTVLHALVMIAD 184 (256)
T ss_dssp TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCC-----CCTT------CCCTTSCCHHHHHHHHCC
T ss_pred CCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccC-----CCcC------ccCCCCCCHHHHHHHccc
Confidence 9988876 9999999999999999999999 77 7777 889999999999999 8
Q ss_pred CCHH-------HHHhhhh
Q 041026 138 LGRV-------NVRRTNT 148 (149)
Q Consensus 138 ~~~~-------~~~~L~~ 148 (149)
++.+ ++++|.+
T Consensus 185 ~~~~~~~~~~~iv~~Ll~ 202 (256)
T 2etb_A 185 NSPENSALVIHMYDGLLQ 202 (256)
T ss_dssp SCHHHHHHHHHHHHHHHH
T ss_pred CCchhhHHHHHHHHHHHH
Confidence 8888 9888864
No 67
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=7.5e-27 Score=145.62 Aligned_cols=121 Identities=20% Similarity=0.167 Sum_probs=111.2
Q ss_pred CCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHHHHHHHc
Q 041026 14 NKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPLHCAARA 93 (149)
Q Consensus 14 g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tplh~a~~~ 93 (149)
+.|+||+|+..|+.+.+++|++. ...+++..+..|.||||+ +..|+.+++++|++ .|++++.+|..|.||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~ 78 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHR-ELVHPDALNRFGKTALQV-MMFGSTAIALELLK-QGASPNVQDTSGTSPVHDAART 78 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT-TCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHT
T ss_pred cchHHHHHHHhCCHHHHHHHHHh-hCcCccccCCCCCcHHHH-HHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHc
Confidence 56899999999999999999998 421378889999999999 99999999999995 5899999999999999999999
Q ss_pred CCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 94 GKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 94 g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
|+.+++++|++.| ++++ .++..|.||||+|+..|+.+++++|.+
T Consensus 79 ~~~~~v~~Ll~~g-----~~~~------~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 122 (156)
T 1bd8_A 79 GFLDTLKVLVEHG-----ADVN------VPDGTGALPIHLAVQEGHTAVVSFLAA 122 (156)
T ss_dssp TCHHHHHHHHHTT-----CCSC------CCCTTSCCHHHHHHHHTCHHHHHHHHT
T ss_pred CcHHHHHHHHHcC-----CCCC------CcCCCCCcHHHHHHHhChHHHHHHHHh
Confidence 9999999999998 7777 789999999999999999999999874
No 68
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.95 E-value=3e-26 Score=158.92 Aligned_cols=99 Identities=22% Similarity=0.332 Sum_probs=92.8
Q ss_pred ccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcH
Q 041026 7 VHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTP 86 (149)
Q Consensus 7 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tp 86 (149)
++.+|..|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..|+.+++++|++ .+++++..|..|.||
T Consensus 51 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~-~g~~~~~~~~~g~t~ 127 (351)
T 3utm_A 51 CHASDGRKSTPLHLAAGYNRVRIVQLLLQHGAD--VHAKDKGGLVPLHNACSYGHYEVTELLLK-HGACVNAMDLWQFTP 127 (351)
T ss_dssp CCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTCCCH
T ss_pred cccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--CCccCCCCCcHHHHHHHCCCHHHHHHHHH-CCCCCCCCCCCCCCH
Confidence 567789999999999999999999999999998 88999999999999999999999999995 589999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhhhc
Q 041026 87 LHCAARAGKLNTATVLVDFAKH 108 (149)
Q Consensus 87 lh~a~~~g~~~~v~~Ll~~~~~ 108 (149)
||+|+..|+.+++++|+++|..
T Consensus 128 L~~A~~~~~~~~v~~Ll~~g~~ 149 (351)
T 3utm_A 128 LHEAASKNRVEVCSLLLSHGAD 149 (351)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999998744
No 69
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.95 E-value=1.7e-26 Score=165.02 Aligned_cols=126 Identities=21% Similarity=0.217 Sum_probs=92.6
Q ss_pred cccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHH
Q 041026 8 HLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPL 87 (149)
Q Consensus 8 ~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tpl 87 (149)
+..|..|.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|++ .|++++.+|..|.|||
T Consensus 272 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~--~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~gad~n~~~~~g~t~L 348 (437)
T 1n11_A 272 NLGNKSGLTPLHLVAQEGHVPVADVLIKHGVM--VDATTRMGYTPLHVASHYGNIKLVKFLLQ-HQADVNAKTKLGYSPL 348 (437)
T ss_dssp TCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCC--TTCCCSSCCCHHHHHHHSSCSHHHHHHHH-TTCCTTCCCTTSCCHH
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCcc--CCCCCCCCCCHHHHHHHcCcHHHHHHHHh-cCCCCCCCCCCCCCHH
Confidence 45566677777777777777777777777766 66667777777777777777777777774 4677777777777777
Q ss_pred HHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhh
Q 041026 88 HCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTN 147 (149)
Q Consensus 88 h~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~ 147 (149)
|+|+..|+.+++++|+++| ++++ .++..|.||+++|...|+.+++++|+
T Consensus 349 ~~A~~~g~~~iv~~Ll~~g-----a~~~------~~~~~g~t~l~~A~~~g~~~~~~~l~ 397 (437)
T 1n11_A 349 HQAAQQGHTDIVTLLLKNG-----ASPN------EVSSDGTTPLAIAKRLGYISVTDVLK 397 (437)
T ss_dssp HHHHHTTCHHHHHHHHHTT-----CCSC------CCCSSSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHCChHHHHHHHHHCc-----CCCC------CCCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 7777777777777777777 6665 67777777777777777777777765
No 70
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.95 E-value=3.3e-26 Score=158.72 Aligned_cols=129 Identities=22% Similarity=0.189 Sum_probs=101.4
Q ss_pred ccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHh---------------
Q 041026 7 VHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQY--------------- 71 (149)
Q Consensus 7 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~--------------- 71 (149)
++.+|..|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..++.+++++|++.
T Consensus 84 ~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l 161 (351)
T 3utm_A 84 VHAKDKGGLVPLHNACSYGHYEVTELLLKHGAC--VNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAV 161 (351)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcch
Confidence 455677788888888888888888888888777 777777777888887777777777776642
Q ss_pred --------------------------------------------------------------------------CCccee
Q 041026 72 --------------------------------------------------------------------------YPFFIN 77 (149)
Q Consensus 72 --------------------------------------------------------------------------~~~~~~ 77 (149)
.+++++
T Consensus 162 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~ 241 (351)
T 3utm_A 162 DMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVN 241 (351)
T ss_dssp HHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTT
T ss_pred HHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcC
Confidence 234455
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 78 KTNNQGDTPLHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 78 ~~~~~g~tplh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
.++..|.||||+|+..|+.+++++|+++| ++++ .+|..|.||||+|+..|+.+++++|.+
T Consensus 242 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----a~~n------~~d~~g~t~L~~A~~~~~~~~v~~Ll~ 301 (351)
T 3utm_A 242 EKNKDFMTPLHVAAERAHNDVMEVLHKHG-----AKMN------ALDSLGQTALHRAALAGHLQTCRLLLS 301 (351)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTT------CCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHCC-----CCCC------CcCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 66778888888888888888888888888 7666 788889999999999999999998864
No 71
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.94 E-value=1.8e-27 Score=158.73 Aligned_cols=123 Identities=17% Similarity=0.101 Sum_probs=111.2
Q ss_pred CCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceeccc-CCCCcHHHH
Q 041026 11 DTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTN-NQGDTPLHC 89 (149)
Q Consensus 11 d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~-~~g~tplh~ 89 (149)
+.+|.||||+|+..|+.+++++|++ +.+ ++..+..|.||||+|+..|+.+++++|++ .|++++.++ ..|.||||+
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~--~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~~g~t~L~~ 117 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRD--VDAVDENGRTALLFVAGLGSDKCVRLLAE-AGADLDHRDMRGGLTALHM 117 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCC--TTCBCTTSCBHHHHHHHHTCHHHHHHHHH-TTCCTTCCCSSSCCCHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCC--CCCcCCCCCCHHHHHHHCCCHHHHHHHHH-cCCCCCcCCCCCCCCHHHH
Confidence 3578999999999999999999999 777 88999999999999999999999999995 689999888 889999999
Q ss_pred HHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHH----------------HcCCHHHHHhhhh
Q 041026 90 AARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREAL----------------FMLGRVNVRRTNT 148 (149)
Q Consensus 90 a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~----------------~~~~~~~~~~L~~ 148 (149)
|+..|+.+++++|+++| ++++ .++..|.||||+|+ ..|+.+++++|..
T Consensus 118 A~~~g~~~~v~~Ll~~g-----a~~~------~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~ 181 (244)
T 3ui2_A 118 AAGYVRPEVVEALVELG-----ADIE------VEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEG 181 (244)
T ss_dssp HHHTTCHHHHHHHHHTT-----CCTT------CCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCC-----CCCC------CCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHH
Confidence 99999999999999999 7777 78888888888887 6688888888864
No 72
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=2.6e-27 Score=157.38 Aligned_cols=123 Identities=18% Similarity=0.131 Sum_probs=110.9
Q ss_pred CCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHHHHHH
Q 041026 12 TTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPLHCAA 91 (149)
Q Consensus 12 ~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tplh~a~ 91 (149)
..|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+
T Consensus 35 ~~~~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~tpL~~A~ 111 (239)
T 1ycs_B 35 PLPLALLLDSSLEGEFDLVQRIIYEVDD--PSLPNDEGITALHNAVCAGHTEIVKFLVQ-FGVNVNAADSDGWTPLHCAA 111 (239)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTSTTSS--CCCCCTTSCCHHHHHHHHTCHHHHHHHHH-HTCCTTCCCTTCCCHHHHHH
T ss_pred chhhHHHHHHHHcCCHHHHHHHHHcCCC--CCCcCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHH
Confidence 5678999999999999999999999988 88899999999999999999999999996 48999999999999999999
Q ss_pred HcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCC-CHHHHH--HHcCCHHHHHhhhh
Q 041026 92 RAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGN-TVLREA--LFMLGRVNVRRTNT 148 (149)
Q Consensus 92 ~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~-t~l~~A--~~~~~~~~~~~L~~ 148 (149)
..|+.+++++|+++| ++++ .++..|. ||+|+| +..|+.+++++|..
T Consensus 112 ~~~~~~~v~~Ll~~g-----a~~~------~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~ 160 (239)
T 1ycs_B 112 SCNNVQVCKFLVESG-----AAVF------AMTYSDMQTAADKCEEMEEGYTQCSQFLYG 160 (239)
T ss_dssp HTTCHHHHHHHHHTT-----CCTT------CCCSSSCCCHHHHCCSSSTTCCCHHHHHHH
T ss_pred HcCCHHHHHHHHHcC-----CCcc------eecCCCCcchHHHHHHhhhccHHHHHHHHH
Confidence 999999999999999 7776 6776666 999999 77899999999864
No 73
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.94 E-value=2.2e-26 Score=155.38 Aligned_cols=128 Identities=17% Similarity=0.131 Sum_probs=112.0
Q ss_pred ccCCCCCCHHHHHHHh---CCHHHHHHHHHhCCCC---------ccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcce
Q 041026 9 LNDTTNKSPLSLAIEM---ENTDVLEYILRSLPSG---------ISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFI 76 (149)
Q Consensus 9 ~~d~~g~t~l~~a~~~---~~~~~~~~ll~~~~~~---------~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~ 76 (149)
..|..|.||||+|+.. |+.+++++|++.+++. .....+..|.||||+|+..|+.+++++|++ .|+++
T Consensus 49 ~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~-~ga~~ 127 (273)
T 2pnn_A 49 KDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVE-NGADV 127 (273)
T ss_dssp SCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHH-TTCCT
T ss_pred ccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHH-CCCCc
Confidence 4588999999999987 9999999999987530 022356789999999999999999999995 58999
Q ss_pred ecccC--------------CCCcHHHHHHHcCCHHHHHHHHH---hhhcCCCCCCCCccccccccCCCCCHHHHHHHcCC
Q 041026 77 NKTNN--------------QGDTPLHCAARAGKLNTATVLVD---FAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLG 139 (149)
Q Consensus 77 ~~~~~--------------~g~tplh~a~~~g~~~~v~~Ll~---~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~ 139 (149)
+.++. .|.||||+|+..|+.+++++|++ .| ++++ .+|..|+||||+|+..++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~g-----ad~~------~~d~~g~tpLh~A~~~~~ 196 (273)
T 2pnn_A 128 QAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQP-----ADIS------ARDSVGNTVLHALVEVAD 196 (273)
T ss_dssp TCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCC-----CCTT------CCCTTSCCHHHHHHHHCC
T ss_pred CccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCC-----CCce------eeCCCCCcHHHHHHHccC
Confidence 98887 79999999999999999999999 77 7777 899999999999999988
Q ss_pred ---------HHHHHhhhh
Q 041026 140 ---------RVNVRRTNT 148 (149)
Q Consensus 140 ---------~~~~~~L~~ 148 (149)
.+++++|.+
T Consensus 197 ~~~~~~~~~~~~v~~Ll~ 214 (273)
T 2pnn_A 197 NTVDNTKFVTSMYNEILI 214 (273)
T ss_dssp SCHHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHH
Confidence 788888764
No 74
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.94 E-value=2.3e-26 Score=160.95 Aligned_cols=133 Identities=17% Similarity=0.091 Sum_probs=90.3
Q ss_pred ccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCcccc------------------------------------------
Q 041026 7 VHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWS------------------------------------------ 44 (149)
Q Consensus 7 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~------------------------------------------ 44 (149)
++.+|..|.||||+|+..|+.+++++|++.++. .+.
T Consensus 46 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 123 (364)
T 3ljn_A 46 PTIQNRFGCTALHLACKFGCVDTAKYLASVGEV--HSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDE 123 (364)
T ss_dssp TTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCC--CCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCC
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCC--ccccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcch
Confidence 455667777777777777777777777777654 222
Q ss_pred ----------CCCCCCcHHHHHHHhC--cHHHHHHHHHhCCcceecccCCCCcHHHHHHHcCCHHHHHHHHHhhhcCCCC
Q 041026 45 ----------SGKSPFSLLDVAAKYG--HGEISAKIAQYYPFFINKTNNQGDTPLHCAARAGKLNTATVLVDFAKHIPST 112 (149)
Q Consensus 45 ----------~~~~~~~~l~~a~~~~--~~~~~~~Ll~~~~~~~~~~~~~g~tplh~a~~~g~~~~v~~Ll~~~~~~~~~ 112 (149)
.+..|.||||+|+..| +.+++++|++. |++++.+|..|.||||+|+..|+.+++++|++.+ +
T Consensus 124 ~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~-ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-----~ 197 (364)
T 3ljn_A 124 REVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQL-GASPTAKDKADETPLMRAMEFRNREALDLMMDTV-----P 197 (364)
T ss_dssp CCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHC-----S
T ss_pred HhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcc-----c
Confidence 4445677777777777 67777777744 6777777777777777777777777777777776 3
Q ss_pred CCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 113 SQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 113 ~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
+.. ...++.++..|.||||+|+..|+.+++++|.+
T Consensus 198 ~~~-~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 232 (364)
T 3ljn_A 198 SKS-SLRLDYANKQGNSHLHWAILINWEDVAMRFVE 232 (364)
T ss_dssp CSS-SCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHT
T ss_pred ccc-cccccccCCCCCcHHHHHHHcCCHHHHHHHHH
Confidence 311 11233677778888888888888888887754
No 75
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.94 E-value=1.5e-25 Score=151.26 Aligned_cols=130 Identities=18% Similarity=0.075 Sum_probs=115.7
Q ss_pred CCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHHHHH
Q 041026 11 DTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPLHCA 90 (149)
Q Consensus 11 d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tplh~a 90 (149)
+..|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..|+.+++++|++ .+.+++.++..|.||||+|
T Consensus 36 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A 112 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDIVELLLRHGAD--PVLRKKNGATPFLLAAIAGSVKLLKLFLS-KGADVNECDFYGFTAFMEA 112 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHHHTCHHHHHHHHH-TTCCTTCBCTTCCBHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCC--CcccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCccCcccCCHHHHH
Confidence 78899999999999999999999999998 88899999999999999999999999995 5899999999999999999
Q ss_pred HHcCCHHHHHHHHHhhhcCCCCCCCC----ccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 91 ARAGKLNTATVLVDFAKHIPSTSQPP----VDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 91 ~~~g~~~~v~~Ll~~~~~~~~~~~~~----~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
+..|+.+++++|++.+ ++++. .......+..|.||||+|+..|+.+++++|.+
T Consensus 113 ~~~~~~~~~~~Ll~~g-----~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 169 (285)
T 1wdy_A 113 AVYGKVKALKFLYKRG-----ANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLD 169 (285)
T ss_dssp HHTTCHHHHHHHHHTT-----CCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHhC-----CCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHH
Confidence 9999999999999999 55541 11112227889999999999999999998864
No 76
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.94 E-value=2.4e-26 Score=154.13 Aligned_cols=126 Identities=15% Similarity=0.085 Sum_probs=109.9
Q ss_pred CCCCCCHHHHHH---HhCCHHHHHHHHHhCCC---------CccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceec
Q 041026 11 DTTNKSPLSLAI---EMENTDVLEYILRSLPS---------GISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINK 78 (149)
Q Consensus 11 d~~g~t~l~~a~---~~~~~~~~~~ll~~~~~---------~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~ 78 (149)
|..|.||||+|+ ..|+.+++++|++.+++ ...+..+..|.||||+|+..|+.+++++|++ .|++++.
T Consensus 43 ~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~ 121 (260)
T 3jxi_A 43 PSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVE-KGADVHA 121 (260)
T ss_dssp TTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHH-TTCCTTC
T ss_pred cCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHh-CCCCcCc
Confidence 477999999999 67999999999998743 1134455689999999999999999999995 6899998
Q ss_pred cc--------------CCCCcHHHHHHHcCCHHHHHHHHH---hhhcCCCCCCCCccccccccCCCCCHHHHHHHcCC--
Q 041026 79 TN--------------NQGDTPLHCAARAGKLNTATVLVD---FAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLG-- 139 (149)
Q Consensus 79 ~~--------------~~g~tplh~a~~~g~~~~v~~Ll~---~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~-- 139 (149)
++ ..|.||||+|+..|+.+++++|++ .| ++++ .+|..|+||||+|+..++
T Consensus 122 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~g-----a~~~------~~d~~g~TpLh~A~~~~~~~ 190 (260)
T 3jxi_A 122 QARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQ-----ADLR------RQDSRGNTVLHALVAIADNT 190 (260)
T ss_dssp CCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCC-----CCTT------CCCTTSCCHHHHHHHHCCSS
T ss_pred cccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccC-----CCCc------ccCCCCCcHHHHHHHhccCc
Confidence 88 689999999999999999999999 77 7777 899999999999999887
Q ss_pred -------HHHHHhhhh
Q 041026 140 -------RVNVRRTNT 148 (149)
Q Consensus 140 -------~~~~~~L~~ 148 (149)
.+++++|.+
T Consensus 191 ~~~~~~~~~~v~~Ll~ 206 (260)
T 3jxi_A 191 RENTKFVTKMYDLLLI 206 (260)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHH
Confidence 688888754
No 77
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.94 E-value=2.1e-25 Score=150.57 Aligned_cols=123 Identities=17% Similarity=0.065 Sum_probs=62.2
Q ss_pred CCCCCCHHHHHHHhCCHHHHHHHHHh-CCCCccccCCCCCCcHHHHHHHhCc----HHHHHHHHHhCCcceecccCCCCc
Q 041026 11 DTTNKSPLSLAIEMENTDVLEYILRS-LPSGISWSSGKSPFSLLDVAAKYGH----GEISAKIAQYYPFFINKTNNQGDT 85 (149)
Q Consensus 11 d~~g~t~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~~~~l~~a~~~~~----~~~~~~Ll~~~~~~~~~~~~~g~t 85 (149)
+..|.||||+|+..|+.+++++|++. +.+ ++..+..|.||||+|+..++ .+++++|++ .|++++.+|..|.|
T Consensus 145 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~--~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~-~g~~~~~~~~~g~t 221 (285)
T 1wdy_A 145 RKGGATALMDAAEKGHVEVLKILLDEMGAD--VNACDNMGRNALIHALLSSDDSDVEAITHLLLD-HGADVNVRGERGKT 221 (285)
T ss_dssp TCCCCCHHHHHHHHTCHHHHHHHHHTSCCC--TTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHH-TTCCSSCCCTTSCC
T ss_pred ccCCCcHHHHHHHcCCHHHHHHHHHhcCCC--CCccCCCCCCHHHHHHHccccchHHHHHHHHHH-cCCCCCCcCCCCCc
Confidence 33444444444444444444444443 333 44444444445544444444 444444442 34445555555555
Q ss_pred HHHHHHHcCCHHHHHHHHH-hhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhh
Q 041026 86 PLHCAARAGKLNTATVLVD-FAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTN 147 (149)
Q Consensus 86 plh~a~~~g~~~~v~~Ll~-~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~ 147 (149)
|||+|+..|+.+++++|++ .| ++++ .++..|.||||+|+..|+.+++++|.
T Consensus 222 ~L~~A~~~~~~~~v~~Ll~~~g-----~~~~------~~~~~g~t~l~~A~~~~~~~i~~~Ll 273 (285)
T 1wdy_A 222 PLILAVEKKHLGLVQRLLEQEH-----IEIN------DTDSDGKTALLLAVELKLKKIAELLC 273 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHSSS-----CCTT------CCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhccC-----CCcc------ccCCCCCcHHHHHHHcCcHHHHHHHH
Confidence 5555555555555555555 33 3333 55566666666666666666666554
No 78
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=1.4e-26 Score=153.89 Aligned_cols=123 Identities=18% Similarity=0.051 Sum_probs=83.3
Q ss_pred CCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHHHHH
Q 041026 11 DTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPLHCA 90 (149)
Q Consensus 11 d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tplh~a 90 (149)
+..|.||||.|++.++.+.++.|++.+++ ++. +..+.||||.|+..|+.+++++|++ .+.+++.+|..|.||||+|
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~--~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~d~~g~t~L~~A 77 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMR--VKF-NPLPLALLLDSSLEGEFDLVQRIIY-EVDDPSLPNDEGITALHNA 77 (239)
T ss_dssp --------------------------------------CHHHHHHHHHHTCHHHHHHHTS-TTSSCCCCCTTSCCHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCC--ccc-CchhhHHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHH
Confidence 46799999999999999999999999998 654 4678899999999999999999995 5889999999999999999
Q ss_pred HHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 91 ARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 91 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
+..|+.+++++|+++| ++++ .+|..|+||||+|+..|+.+++++|.+
T Consensus 78 ~~~g~~~~v~~Ll~~g-----a~~~------~~d~~g~tpL~~A~~~~~~~~v~~Ll~ 124 (239)
T 1ycs_B 78 VCAGHTEIVKFLVQFG-----VNVN------AADSDGWTPLHCAASCNNVQVCKFLVE 124 (239)
T ss_dssp HHHTCHHHHHHHHHHT-----CCTT------CCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcC-----CCCC------ccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 9999999999999999 8777 789999999999999999999999875
No 79
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.94 E-value=2.6e-26 Score=156.26 Aligned_cols=128 Identities=13% Similarity=0.047 Sum_probs=76.2
Q ss_pred CCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCC-CcHHHHHH
Q 041026 13 TNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQG-DTPLHCAA 91 (149)
Q Consensus 13 ~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g-~tplh~a~ 91 (149)
+|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..|+.+++++|++. |++++.++..| .||||+|+
T Consensus 61 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~--~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~~t~L~~A~ 137 (285)
T 3kea_A 61 ENEFPLHQAATLEDTKIVKILLFSGLD--DSQFDDKGNTALYYAVDSGNMQTVKLFVKK-NWRLMFYGKTGWKTSFYHAV 137 (285)
T ss_dssp TTCCHHHHHTTSSSCHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-CGGGGGCSSSGGGSHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCC--CCCcCCCCCcHHHHHHHcCCHHHHHHHHhc-CCCCCccCCCCCCCHHHHHH
Confidence 466666666666666666666666666 555666666666666666666666666643 56666666666 56666666
Q ss_pred HcCCHHHHHHHHHhhhcCCCCCCCC--------------------------ccccccccCCCCCH-HHHHHHcCCHHHHH
Q 041026 92 RAGKLNTATVLVDFAKHIPSTSQPP--------------------------VDLLRMENAMGNTV-LREALFMLGRVNVR 144 (149)
Q Consensus 92 ~~g~~~~v~~Ll~~~~~~~~~~~~~--------------------------~~~~~~~~~~g~t~-l~~A~~~~~~~~~~ 144 (149)
..|+.+++++|++++ ++... ..+++.++..|.|| ||+|+..++.++++
T Consensus 138 ~~~~~~~v~~Ll~~g-----~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~ 212 (285)
T 3kea_A 138 MLNDVSIVSYFLSEI-----PSTFDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQ 212 (285)
T ss_dssp HTTCHHHHHHHHTTS-----CTTCCCSTHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHH
T ss_pred HcCCHHHHHHHHhCC-----CccccccCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHH
Confidence 666666666666655 22110 11222556666665 66666666666666
Q ss_pred hhhh
Q 041026 145 RTNT 148 (149)
Q Consensus 145 ~L~~ 148 (149)
+|.+
T Consensus 213 ~Ll~ 216 (285)
T 3kea_A 213 ALFK 216 (285)
T ss_dssp HHTT
T ss_pred HHHH
Confidence 6643
No 80
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.94 E-value=2.1e-25 Score=147.34 Aligned_cols=126 Identities=18% Similarity=0.176 Sum_probs=90.0
Q ss_pred ccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCc-HHHHHHHHHhCCcceecccC-CCCcH
Q 041026 9 LNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGH-GEISAKIAQYYPFFINKTNN-QGDTP 86 (149)
Q Consensus 9 ~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~-~~~~~~Ll~~~~~~~~~~~~-~g~tp 86 (149)
.+|..|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..++ .+++++|+ ..+.+++..+. .|.||
T Consensus 104 ~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~--~~~~~~~g~t~l~~a~~~~~~~~~~~~L~-~~~~~~~~~~~~~g~t~ 180 (240)
T 3eu9_A 104 LIDGEGCSCIHLAAQFGHTSIVAYLIAKGQD--VDMMDQNGMTPLMWAAYRTHSVDPTRLLL-TFNVSVNLGDKYHKNTA 180 (240)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHHCCSSTTHHHHH-HTTCCTTCCCTTTCCCH
T ss_pred ccCCCCCCHHHHHHHcCHHHHHHHHHhcCCC--ccccCCCCCcHHHHHHHhCChHHHHHHHH-hcCCCcchhhccCCCcH
Confidence 3455566666666666666666666666555 55555566666666664444 45555555 34566666665 78888
Q ss_pred HHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 87 LHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 87 lh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
||+|+..|+.+++++|+++| ++++ .++..|.||+++|+..|+.+++++|.+
T Consensus 181 L~~A~~~~~~~~v~~Ll~~g-----~~~~------~~~~~g~t~l~~A~~~~~~~~v~~L~~ 231 (240)
T 3eu9_A 181 LHWAVLAGNTTVISLLLEAG-----ANVD------AQNIKGESALDLAKQRKNVWMINHLQE 231 (240)
T ss_dssp HHHHHHHTCHHHHHHHHHHT-----CCTT------CBCTTSCBHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcC-----CCCC------CcCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 88888888888888888888 7666 788999999999999999999998875
No 81
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.94 E-value=6.2e-26 Score=159.12 Aligned_cols=123 Identities=15% Similarity=0.013 Sum_probs=114.9
Q ss_pred CCCCCHHHHHHHh-CCHHHHHHHHHhCCCCccccCC--CCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHHH
Q 041026 12 TTNKSPLSLAIEM-ENTDVLEYILRSLPSGISWSSG--KSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPLH 88 (149)
Q Consensus 12 ~~g~t~l~~a~~~-~~~~~~~~ll~~~~~~~~~~~~--~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tplh 88 (149)
..+.++||.|+.. ++.+++++|++.+++ ++..+ ..|.||||+|+..++.+++++|++ .|++++.+|..|.||||
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gad--vn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~-~Gadvn~~d~~G~TpLh 273 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGAD--VNWVNGGQDNATPLIQATAANSLLACEFLLQ-NGANVNQADSAGRGPLH 273 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTCC--TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCCC--CCccccccCCCCHHHHHHHCCCHHHHHHHHH-cCCCCCCCCCCCCCHHH
Confidence 4456799999999 999999999999999 77777 889999999999999999999995 69999999999999999
Q ss_pred HHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 89 CAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 89 ~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
+|+..|+.+++++|+++| ++++ .+|..|.||||+|+..++.+++++|+.
T Consensus 274 ~A~~~g~~~~v~~LL~~G-----ad~~------~~d~~G~TpL~~A~~~g~~~iv~lLl~ 322 (368)
T 3jue_A 274 HATILGHTGLACLFLKRG-----ADLG------ARDSEGRDPLTIAMETANADIVTLLRL 322 (368)
T ss_dssp HHHHHTCHHHHHHHHHTT-----CCTT------CCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHcCcHHHHHHHHHCc-----CCCC------CcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 999999999999999999 8777 899999999999999999999999975
No 82
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.93 E-value=1.5e-25 Score=157.57 Aligned_cols=133 Identities=20% Similarity=0.142 Sum_probs=113.5
Q ss_pred ccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCC---cceecccCCC
Q 041026 7 VHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYP---FFINKTNNQG 83 (149)
Q Consensus 7 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~---~~~~~~~~~g 83 (149)
++.+|.+|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..|+.+++++|++ .+ .+++..|..|
T Consensus 159 vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~--~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~~~~~d~~g 235 (373)
T 2fo1_E 159 VNAMDCDENTPLMLAVLARRRRLVAYLMKAGAD--PTIYNKSERSALHQAAANRDFGMMVYMLN-STKLKGDIEELDRNG 235 (373)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC--SCCCCTTCCCHHHHHHHTTCHHHHHHHTT-SHHHHHTTSCCCTTS
T ss_pred CcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCC--CcccCCCCCCHHHHHHHCCCHHHHHHHHh-cCccccChhhcCCCC
Confidence 577899999999999999999999999999999 88999999999999999999999999995 34 6888999999
Q ss_pred CcHHHHHHHcC---CHHHHHHHHHhhhcCCCCCCCC--ccccccccCCCCCHHHHHHHcCCHHHHHhhh
Q 041026 84 DTPLHCAARAG---KLNTATVLVDFAKHIPSTSQPP--VDLLRMENAMGNTVLREALFMLGRVNVRRTN 147 (149)
Q Consensus 84 ~tplh~a~~~g---~~~~v~~Ll~~~~~~~~~~~~~--~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~ 147 (149)
.||||+|+..+ +.+++++|++.| ++++. ....+.++..|.||||+|+..|+.+++++|.
T Consensus 236 ~t~L~~A~~~~~~~~~~~v~~Ll~~g-----~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll 299 (373)
T 2fo1_E 236 MTALMIVAHNEGRDQVASAKLLVEKG-----AKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLV 299 (373)
T ss_dssp CCHHHHHHHSCSTTHHHHHHHHHHHT-----CCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHH
T ss_pred CCHHHHHHHhCCcchHHHHHHHHHCC-----CCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHH
Confidence 99999999998 889999999999 55441 0112235667778888888888888887775
No 83
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.93 E-value=3.9e-28 Score=160.63 Aligned_cols=137 Identities=18% Similarity=0.096 Sum_probs=117.6
Q ss_pred cccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceeccc-CCCC
Q 041026 6 LVHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTN-NQGD 84 (149)
Q Consensus 6 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~-~~g~ 84 (149)
.++.+|.+|.||||+|+..|+.+++++|++.+++ ++..+..|+||||+|+..|+.+++++|++ .|++++..+ ..|.
T Consensus 46 ~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~--~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~-~ga~~~~~~~~~g~ 122 (229)
T 2vge_A 46 DPSQPNEEGITALHNAICGANYSIVDFLITAGAN--VNSPDSHGWTPLHCAASCNDTVICMALVQ-HGAAIFATTLSDGA 122 (229)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHHTTCHHHHHHHHT-TTCCTTCCCSSTTC
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCcccccCCCCC
Confidence 3567899999999999999999999999999999 99999999999999999999999999995 689999886 6999
Q ss_pred cHHHHH--HHcCCHHHHHHHHHhhhcCCCCCCCC---------------------ccccccccCCCCCHHHHHHHcCCHH
Q 041026 85 TPLHCA--ARAGKLNTATVLVDFAKHIPSTSQPP---------------------VDLLRMENAMGNTVLREALFMLGRV 141 (149)
Q Consensus 85 tplh~a--~~~g~~~~v~~Ll~~~~~~~~~~~~~---------------------~~~~~~~~~~g~t~l~~A~~~~~~~ 141 (149)
||||+| +..|+.+++++|++.|...+..+... ...++.+|..|.||||+|+..|+.+
T Consensus 123 tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~ 202 (229)
T 2vge_A 123 TAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGDELSFREGESVTVLRRDGPEETDWWWAALHGQEG 202 (229)
T ss_dssp CTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSSTTBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEE
T ss_pred CHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhccccccCccccccccccccCCCcccHHHHHHHcCCcc
Confidence 999999 99999999999999985532111000 1225678889999999999999988
Q ss_pred HHHh
Q 041026 142 NVRR 145 (149)
Q Consensus 142 ~~~~ 145 (149)
+++.
T Consensus 203 ~v~~ 206 (229)
T 2vge_A 203 YVPR 206 (229)
T ss_dssp EEEG
T ss_pred eeeh
Confidence 8764
No 84
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.93 E-value=3e-25 Score=127.34 Aligned_cols=91 Identities=27% Similarity=0.404 Sum_probs=86.2
Q ss_pred CCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHHHHHHH
Q 041026 13 TNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPLHCAAR 92 (149)
Q Consensus 13 ~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tplh~a~~ 92 (149)
+|.||||+|+..|+.+++++|++.+++ ++.++..|+||||+|+..++.+++++|++ .|++++.+|..|.||||+|+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~t~l~~A~~ 77 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD--VNAKDKNGRTPLHLAARNGHLEVVKLLLE-AGADVNAKDKNGRTPLHLAAR 77 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC--CcccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHH
Confidence 589999999999999999999999999 89999999999999999999999999995 689999999999999999999
Q ss_pred cCCHHHHHHHHHhh
Q 041026 93 AGKLNTATVLVDFA 106 (149)
Q Consensus 93 ~g~~~~v~~Ll~~~ 106 (149)
.|+.+++++|+++|
T Consensus 78 ~~~~~~~~~Ll~~g 91 (93)
T 1n0q_A 78 NGHLEVVKLLLEAG 91 (93)
T ss_dssp TTCHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHcC
Confidence 99999999999988
No 85
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.93 E-value=6.7e-26 Score=154.53 Aligned_cols=123 Identities=19% Similarity=0.121 Sum_probs=114.8
Q ss_pred CCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHHHHH
Q 041026 11 DTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPLHCA 90 (149)
Q Consensus 11 d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tplh~a 90 (149)
+..|.||||.||..|+.+++++|++.+++ ++..+..|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+|
T Consensus 37 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~g~tpL~~A 113 (299)
T 1s70_B 37 KFDDGAVFLAACSSGDTEEVLRLLERGAD--INYANVDGLTALHQACIDDNVDMVKFLVE-NGANINQPDNEGWIPLHAA 113 (299)
T ss_dssp EECHHHHHHHHHHHTCHHHHHHHHHHCCC--TTCBCTTCCBHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHH
T ss_pred ccCCccHHHHHHHcCCHHHHHHHHHcCCC--CcccCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCcHHHHH
Confidence 45678999999999999999999999998 88899999999999999999999999995 6899999999999999999
Q ss_pred HHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhh
Q 041026 91 ARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTN 147 (149)
Q Consensus 91 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~ 147 (149)
+..|+.+++++|+++| ++++ ..+..|.||||+|+..++.++++.+.
T Consensus 114 ~~~g~~~~v~~Ll~~g-----~~~~------~~~~~g~t~l~~A~~~~~~~~~~~ll 159 (299)
T 1s70_B 114 ASCGYLDIAEYLISQG-----AHVG------AVNSEGDTPLDIAEEEAMEELLQNEV 159 (299)
T ss_dssp HHHTCHHHHHHHHHTT-----CCTT------CCCTTSCCHHHHCCSHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHhCC-----CCCC------CcCCCCCCHHHHHHhcchHHHHHHHH
Confidence 9999999999999999 7776 78999999999999999999988654
No 86
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.93 E-value=4.1e-25 Score=151.46 Aligned_cols=121 Identities=17% Similarity=0.014 Sum_probs=111.8
Q ss_pred CCCHHHHHHHhCCHHHHHHHHHhCCCCcccc------CCCCCCcHHHHHHHh---CcHHHHHHHHHhCCcceecccCCCC
Q 041026 14 NKSPLSLAIEMENTDVLEYILRSLPSGISWS------SGKSPFSLLDVAAKY---GHGEISAKIAQYYPFFINKTNNQGD 84 (149)
Q Consensus 14 g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~------~~~~~~~~l~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~g~ 84 (149)
..++|+.|+..|+.+.++.|+..+++ ++. .+..|.||||+|+.. ++.+++++|++. |++++.+|..|.
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d--~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~-gadvn~~d~~G~ 227 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQD--FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN-GGHLDAKAADGN 227 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCC--TTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHH-SSCTTCCCTTCC
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCc--ccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhc-CCCCCCCCCCCC
Confidence 45679999999999999999999988 666 588999999999997 899999999965 899999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 85 TPLHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 85 tplh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
||||+|+..|+.+++++|+++| ++++ .+|..|.|||++|+..++.+++++|.+
T Consensus 228 TpLh~A~~~g~~~~v~~Ll~~g-----ad~~------~~d~~G~TpL~~A~~~~~~~iv~~Ll~ 280 (301)
T 2b0o_E 228 TALHYAALYNQPDCLKLLLKGR-----ALVG------TVNEAGETALDIARKKHHKECEELLEQ 280 (301)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTT-----CCCS------CCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcC-----CCCC------CcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 9999999999999999999999 8777 899999999999999999999999875
No 87
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.93 E-value=8.2e-25 Score=151.67 Aligned_cols=128 Identities=16% Similarity=0.056 Sum_probs=96.5
Q ss_pred cccCCCCCCHHHHHHHhCCHHHHHHHHHh-CCCCccccCCCCCCcHHHHHHHhCc----HHHHHHHHHhCCcceecccCC
Q 041026 8 HLNDTTNKSPLSLAIEMENTDVLEYILRS-LPSGISWSSGKSPFSLLDVAAKYGH----GEISAKIAQYYPFFINKTNNQ 82 (149)
Q Consensus 8 ~~~d~~g~t~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~~~~l~~a~~~~~----~~~~~~Ll~~~~~~~~~~~~~ 82 (149)
...+..|.||||+|+..|+.+++++|++. +++ ++..+..|.++++.++..+. ..++++|++ .|++++.+|..
T Consensus 162 ~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad--~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~-~gad~n~~d~~ 238 (337)
T 4g8k_A 162 ERLRKGGATALMDAAEKGHVEVLKILLDEMGAD--VNACDNMGRNALIHALLSSDDSDVEAITHLLLD-HGADVNVRGER 238 (337)
T ss_dssp --CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCC--TTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHH-TTCCTTCCCGG
T ss_pred ccccCCCCcHHHHHHHCCCHHHHHHHHhccCCC--cCccCCCCCcHHHHHHHHcCcccHHHHHHHHHH-CCCCCCCcCCC
Confidence 44567899999999999999999999965 666 77777778888877665543 346677774 57778888888
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 83 GDTPLHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 83 g~tplh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
|.||||+|+..|+.+++++|++.. |++++ .+|..|+||||+|+..|+.+++++|.+
T Consensus 239 g~t~L~~a~~~~~~~~v~~Ll~~~----~~~vn------~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 294 (337)
T 4g8k_A 239 GKTPLILAVEKKHLGLVQRLLEQE----HIEIN------DTDSDGKTALLLAVELKLKKIAELLCK 294 (337)
T ss_dssp GCCHHHHHHHTTCHHHHHHHHTST----TCCTT------CBCTTSCBHHHHHHHTTCHHHHHHHHT
T ss_pred CCCHHHHHHHhhhhHHHHHHHHhc----CCccc------CcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 888888888888888888877653 25555 677788888888888888888887764
No 88
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.93 E-value=9.9e-25 Score=144.08 Aligned_cols=124 Identities=15% Similarity=0.121 Sum_probs=66.3
Q ss_pred cCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceec-ccCCCCcHHH
Q 041026 10 NDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINK-TNNQGDTPLH 88 (149)
Q Consensus 10 ~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~-~~~~g~tplh 88 (149)
.|..|.++|+.|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|++. +.+++. .+..|.||||
T Consensus 5 ~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~t~L~ 81 (240)
T 3eu9_A 5 IDDYSTWDIVKATQYGIYERCRELVEAGYD--VRQPDKENVTLLHWAAINNRIDLVKYYISK-GAIVDQLGGDLNSTPLH 81 (240)
T ss_dssp CSCGGGCCHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCBTTTTBCHHH
T ss_pred cccccchHHHHHHHcCChHHHHHHHHcCCC--cCCCCCCCCCHHHHHHHhCCHHHHHHHHHc-CCcchhhcCCcCCChhH
Confidence 345555555555555555555555555555 555555555555555555555555555532 333332 2233555555
Q ss_pred HHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhh
Q 041026 89 CAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTN 147 (149)
Q Consensus 89 ~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~ 147 (149)
+|+..|+.+++++|++.| ++++ .++..|.||||+|+..|+.+++++|.
T Consensus 82 ~A~~~~~~~~v~~Ll~~g-----~~~~------~~~~~g~t~l~~A~~~~~~~~~~~Ll 129 (240)
T 3eu9_A 82 WATRQGHLSMVVQLMKYG-----ADPS------LIDGEGCSCIHLAAQFGHTSIVAYLI 129 (240)
T ss_dssp HHHHHTCHHHHHHHHHTT-----CCTT------CCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcC-----CCCc------ccCCCCCCHHHHHHHcCHHHHHHHHH
Confidence 555555555555555555 4443 44555555555555555555555543
No 89
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.93 E-value=6.2e-25 Score=149.05 Aligned_cols=122 Identities=16% Similarity=0.035 Sum_probs=111.1
Q ss_pred CCHHHHHHHhCCHHHHHHHHHhCCCCc----cccCCCCCCcHHHHHHHh---CcHHHHHHHHHhCCcceecccCCCCcHH
Q 041026 15 KSPLSLAIEMENTDVLEYILRSLPSGI----SWSSGKSPFSLLDVAAKY---GHGEISAKIAQYYPFFINKTNNQGDTPL 87 (149)
Q Consensus 15 ~t~l~~a~~~~~~~~~~~ll~~~~~~~----~~~~~~~~~~~l~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~g~tpl 87 (149)
.++|+.|+..|+.+.+..+++.+.+.. ++..+..|.||||+|+.. ++.+++++|++. |++++.+|..|.|||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~-ga~in~~d~~g~TpL 209 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQN-SGNLDKQTGKGSTAL 209 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHH-CSCTTCCCTTCCCHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHC-CCCccccCCCCCCHH
Confidence 468999999999999999999998721 334477899999999999 899999999964 899999999999999
Q ss_pred HHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 88 HCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 88 h~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
|+|+..|+.+++++|+++| ++++ .+|..|.||||+|+..|+.+++++|.+
T Consensus 210 h~A~~~g~~~~v~~Ll~~g-----ad~~------~~d~~g~tpL~~A~~~~~~~~v~~Ll~ 259 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLRGK-----ASIE------IANESGETPLDIAKRLKHEHCEELLTQ 259 (278)
T ss_dssp HHHHHTTCHHHHHHHHHTT-----CCTT------CCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcC-----CCCC------CccCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 9999999999999999999 8877 899999999999999999999999875
No 90
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.93 E-value=6.4e-25 Score=159.53 Aligned_cols=122 Identities=17% Similarity=0.017 Sum_probs=112.7
Q ss_pred CCCHHHHHHHhCCHHHHHHHHHhCCCCccccC------CCCCCcHHHHHHH---hCcHHHHHHHHHhCCcceecccCCCC
Q 041026 14 NKSPLSLAIEMENTDVLEYILRSLPSGISWSS------GKSPFSLLDVAAK---YGHGEISAKIAQYYPFFINKTNNQGD 84 (149)
Q Consensus 14 g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~------~~~~~~~l~~a~~---~~~~~~~~~Ll~~~~~~~~~~~~~g~ 84 (149)
..+.||.|+..|+.+.++.|++.+++ ++.. +..|.||||+|+. .|+.+++++|++ .|++++.+|..|+
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~--~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~-~ga~vn~~d~~g~ 208 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQD--FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQ-NGGHLDAKAADGN 208 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCC--SSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHH-HSCCTTCCCSSSC
T ss_pred cHHHHHHHHhccCHHHHHHHHhhccc--ccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHH-cCCCCCccCCCCC
Confidence 34679999999999999999999998 6655 7889999999976 899999999996 5899999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhhC
Q 041026 85 TPLHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNTA 149 (149)
Q Consensus 85 tplh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~a 149 (149)
||||+|+..|+.+++++|+++| ++++ .+|..|.||||+|+..|+.+++++|.++
T Consensus 209 TpLh~A~~~g~~~~v~~Ll~~g-----a~~~------~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ 262 (497)
T 3lvq_E 209 TALHYAALYNQPDCLKLLLKGR-----ALVG------TVNEAGETALDIARKKHHKECEELLEQA 262 (497)
T ss_dssp CHHHHHTTTTCHHHHHHHHHTC-----CCCS------CCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred cHHHHHHHcCCHHHHHHHHHcC-----CCCC------CcCCCCCCHHHHHHHcCCHHHHHHHHHh
Confidence 9999999999999999999999 8887 8999999999999999999999999763
No 91
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.92 E-value=2.3e-24 Score=149.38 Aligned_cols=124 Identities=17% Similarity=0.110 Sum_probs=111.6
Q ss_pred ccccCCCCCCHHHHHHHhCC----HHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCC
Q 041026 7 VHLNDTTNKSPLSLAIEMEN----TDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQ 82 (149)
Q Consensus 7 ~~~~d~~g~t~l~~a~~~~~----~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~ 82 (149)
++.+|..|.|+++.++..+. ..++++|++.+++ ++.++..|.||||+|+..++.++++.|++..+++++.+|..
T Consensus 195 ~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad--~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~ 272 (337)
T 4g8k_A 195 VNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD--VNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSD 272 (337)
T ss_dssp TTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCC--TTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTT
T ss_pred cCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCC--CCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCC
Confidence 56788999999999887644 3578899999999 89999999999999999999999999997778999999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 83 GDTPLHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 83 g~tplh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
|+||||+|+..|+.+++++|+++| ++++ ..+||++|+..|+.+++++|.+
T Consensus 273 G~TpL~~A~~~g~~~iv~~Ll~~G-----Ad~n-----------~~~~L~~A~~~~~~~iv~~Ll~ 322 (337)
T 4g8k_A 273 GKTALLLAVELKLKKIAELLCKRG-----ASTD-----------CGDLVMTARRNYDHSLVKVLLS 322 (337)
T ss_dssp SCBHHHHHHHTTCHHHHHHHHTTS-----CSST-----------TCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCC-----CCCC-----------CCCHHHHHHHcCCHHHHHHHHH
Confidence 999999999999999999999999 5554 3469999999999999999975
No 92
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.92 E-value=3.2e-25 Score=131.76 Aligned_cols=109 Identities=19% Similarity=0.193 Sum_probs=99.5
Q ss_pred ccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHHH
Q 041026 9 LNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPLH 88 (149)
Q Consensus 9 ~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tplh 88 (149)
.+|.+|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..++.+++++|++ .+++++.+|..|.||||
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~--~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~d~~g~tpl~ 80 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGAD--VNARSKDGNTPLHLAAKNGHAEIVKLLLA-KGADVNARSKDGNTPEH 80 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCC--SSCCCSSSCCTTHHHHTTTCHHHHHHHTT-TTCCTTCCCTTCCCTTH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--CCCcCCCCCCHHHHHHHcCcHHHHHHHHH-cCCCCcccCCCCCCHHH
Confidence 5789999999999999999999999999998 88899999999999999999999999995 58999999999999999
Q ss_pred HHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHH
Q 041026 89 CAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVL 131 (149)
Q Consensus 89 ~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l 131 (149)
+|+..|+.+++++|+++| ++++ .++..|.+|-
T Consensus 81 ~A~~~~~~~~~~~Ll~~g-----a~~n------~~~~~~~~~~ 112 (115)
T 2l6b_A 81 LAKKNGHHEIVKLLDAKG-----ADVN------ARSWGSSHHH 112 (115)
T ss_dssp HHHTTTCHHHHHHHHTTS-----SSHH------HHSCCCC---
T ss_pred HHHHCCCHHHHHHHHHcC-----CCCC------cCCccccccc
Confidence 999999999999999999 7666 7888888774
No 93
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.92 E-value=4.2e-24 Score=122.49 Aligned_cols=89 Identities=26% Similarity=0.257 Sum_probs=82.6
Q ss_pred CCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHHHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCC
Q 041026 48 SPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPLHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMG 127 (149)
Q Consensus 48 ~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tplh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g 127 (149)
.|+||||+|+..++.+++++|++ .+++++.+|..|.||||+|+..|+.+++++|++.| ++++ .+|..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~------~~d~~g 68 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLE-AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG-----ADVN------AKDKNG 68 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTT------CCCTTS
T ss_pred CCCcHHHHHHHcCCHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCC------ccCCCC
Confidence 37899999999999999999995 68999999999999999999999999999999999 7777 789999
Q ss_pred CCHHHHHHHcCCHHHHHhhhh
Q 041026 128 NTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 128 ~t~l~~A~~~~~~~~~~~L~~ 148 (149)
.||||+|+..|+.+++++|.+
T Consensus 69 ~t~l~~A~~~~~~~~~~~Ll~ 89 (93)
T 1n0q_A 69 RTPLHLAARNGHLEVVKLLLE 89 (93)
T ss_dssp CCHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHH
Confidence 999999999999999999875
No 94
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.91 E-value=2.9e-24 Score=147.22 Aligned_cols=111 Identities=14% Similarity=0.123 Sum_probs=96.8
Q ss_pred cCCCCCCHHHHHHHh---CCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcH
Q 041026 10 NDTTNKSPLSLAIEM---ENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTP 86 (149)
Q Consensus 10 ~d~~g~t~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tp 86 (149)
.|..|.||||+|+.. ++.+++++|++.+++ ++..+..|+||||+|+..|+.+++++|++ .|++++.+|..|.||
T Consensus 186 ~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad--vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~-~gad~~~~d~~G~Tp 262 (301)
T 2b0o_E 186 AQAPEELVLHLAVKVANQASLPLVDFIIQNGGH--LDAKAADGNTALHYAALYNQPDCLKLLLK-GRALVGTVNEAGETA 262 (301)
T ss_dssp SCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC--TTCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCCSCCCTTSCCH
T ss_pred cCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC--CCCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCH
Confidence 588999999999997 899999999999999 89999999999999999999999999995 699999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCH
Q 041026 87 LHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGR 140 (149)
Q Consensus 87 lh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~ 140 (149)
||+|+..|+.+++++|++.+ . + .|.||||+|+..|+.
T Consensus 263 L~~A~~~~~~~iv~~Ll~~g---------------a-~-~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 263 LDIARKKHHKECEELLEQAQ---------------A-G-TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHHHTCHHHHHHHHHHH---------------H-H-TTSSCCC--------
T ss_pred HHHHHHcCCHHHHHHHHHhc---------------C-C-CCCChhHHHHhcCCc
Confidence 99999999999999999998 1 1 578999999998874
No 95
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.91 E-value=1.2e-24 Score=135.80 Aligned_cols=112 Identities=14% Similarity=0.137 Sum_probs=90.9
Q ss_pred ccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCc-HHHHHHHhCcHHHHHHHHHhCCcceecccCCCCc
Q 041026 7 VHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFS-LLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDT 85 (149)
Q Consensus 7 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~-~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 85 (149)
++.+|..|.||||+|+ .|+.+++++|++.+++ ++.++..|.| |||+|+..++.+++++|++. |++++.+|..|.|
T Consensus 38 ~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~--~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~t 113 (156)
T 1bi7_B 38 PNAPNSYGRRPIQVMM-MGSARVAELLLLHGAE--PNCADPATLTRPVHDAAREGFLDTLVVLHRA-GARLDVRDAWGRL 113 (156)
T ss_dssp TTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC--CCCCCTTTCCCHHHHHHHHTCHHHHHHHHHH-TCCSSCCCTTCCC
T ss_pred CCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC--CCCcCCCCCcHHHHHHHHCCCHHHHHHHHHc-CCCCcccCCCCCC
Confidence 5677899999999985 8999999999999998 8999999999 99999999999999999964 8999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHH
Q 041026 86 PLHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLRE 133 (149)
Q Consensus 86 plh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~ 133 (149)
|||+|+..|+.+++++|+++| ++++ .++..|.||.+-
T Consensus 114 pl~~A~~~~~~~~v~~Ll~~g-----a~~~------~~~~~g~t~~~~ 150 (156)
T 1bi7_B 114 PVDLAEELGHRDVARYLRAAA-----GGTR------GSNHARIDAAEG 150 (156)
T ss_dssp HHHHHHHHTCHHHHHHHSSCC---------------------------
T ss_pred HHHHHHHhCHHHHHHHHHHcC-----CCCC------ccCcCcCccccc
Confidence 999999999999999999999 7777 788899998873
No 96
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.91 E-value=3e-23 Score=126.74 Aligned_cols=97 Identities=23% Similarity=0.284 Sum_probs=91.2
Q ss_pred ccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcH
Q 041026 7 VHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTP 86 (149)
Q Consensus 7 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tp 86 (149)
++.+|..|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..++.+++++|++ .+++++.+|..|.||
T Consensus 40 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~tp 116 (136)
T 2jab_A 40 VNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD--VNAVDAIGFTPLHLAAFIGHLEIAEVLLK-HGADVNAQDKFGKTA 116 (136)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCH
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--CCcCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCcCcCCCCCCH
Confidence 567789999999999999999999999999998 88899999999999999999999999995 589999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhh
Q 041026 87 LHCAARAGKLNTATVLVDFA 106 (149)
Q Consensus 87 lh~a~~~g~~~~v~~Ll~~~ 106 (149)
||+|+..|+.+++++|++.|
T Consensus 117 l~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 117 FDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999865
No 97
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.90 E-value=1.3e-24 Score=150.49 Aligned_cols=119 Identities=20% Similarity=0.215 Sum_probs=101.7
Q ss_pred ccccCCCCCCHHHHHHHhCC---HHHHHHHHHhC-CCCccccCCCCCCcHHHHHHH----hCcHHHHHHHHHhC------
Q 041026 7 VHLNDTTNKSPLSLAIEMEN---TDVLEYILRSL-PSGISWSSGKSPFSLLDVAAK----YGHGEISAKIAQYY------ 72 (149)
Q Consensus 7 ~~~~d~~g~t~l~~a~~~~~---~~~~~~ll~~~-~~~~~~~~~~~~~~~l~~a~~----~~~~~~~~~Ll~~~------ 72 (149)
++.+|.+|.||||+|+..|+ .+.++.|++.+ ++ ++..+..|.||||+|+. .++.+++++|++..
T Consensus 157 ~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~--~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~ 234 (327)
T 1sw6_A 157 RLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPC--LILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVK 234 (327)
T ss_dssp TTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGG--GGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhcc--ccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhc
Confidence 56788999999999999988 67777777776 44 78889999999999999 89999999998641
Q ss_pred -------------Cc-------------------------ceecccCCCCcHHHHHHHcCCHHHHHHHHHhhhcCCCCCC
Q 041026 73 -------------PF-------------------------FINKTNNQGDTPLHCAARAGKLNTATVLVDFAKHIPSTSQ 114 (149)
Q Consensus 73 -------------~~-------------------------~~~~~~~~g~tplh~a~~~g~~~~v~~Ll~~~~~~~~~~~ 114 (149)
++ +++.+|..|+||||+|+..|+.+++++|+++| +++
T Consensus 235 ~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~G-----ad~ 309 (327)
T 1sw6_A 235 KQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYG-----ADP 309 (327)
T ss_dssp GGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTT-----CCT
T ss_pred ccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCC
Confidence 11 47788899999999999999999999999999 888
Q ss_pred CCccccccccCCCCCHHHHHHHcC
Q 041026 115 PPVDLLRMENAMGNTVLREALFML 138 (149)
Q Consensus 115 ~~~~~~~~~~~~g~t~l~~A~~~~ 138 (149)
+ .+|..|+||||+|+..|
T Consensus 310 ~------~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 310 F------IANKSGLRPVDFGAGLE 327 (327)
T ss_dssp T------CCCTTSCCGGGGTCC--
T ss_pred c------ccCCCCCCHHHHHHhcC
Confidence 7 89999999999998754
No 98
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.90 E-value=1.1e-23 Score=128.65 Aligned_cols=96 Identities=14% Similarity=0.120 Sum_probs=91.6
Q ss_pred ccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCC-CCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCc
Q 041026 7 VHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKS-PFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDT 85 (149)
Q Consensus 7 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 85 (149)
++.+|..|.||||+|+. ++.+++++|++.+++ ++..+.. |.||||+|+..++.+++++|++ .+++++.+|..|.|
T Consensus 38 ~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~t 113 (136)
T 1d9s_A 38 PNALNRFGRRPIQVMMM-GSAQVAELLLLHGAE--PNCADPATLTRPVHDAAREGFLDTLVVLHR-AGARLDVCDAWGRL 113 (136)
T ss_dssp TTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC--SSCCBTTTTBCHHHHHHHHTCHHHHHHHHH-TCCCCCCCSSSSSC
T ss_pred cCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC--CCCcCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCccCCCCCC
Confidence 56788999999999999 999999999999999 8889998 9999999999999999999995 68999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhh
Q 041026 86 PLHCAARAGKLNTATVLVDFA 106 (149)
Q Consensus 86 plh~a~~~g~~~~v~~Ll~~~ 106 (149)
|||+|+..|+.+++++|+++|
T Consensus 114 pl~~A~~~~~~~~~~~Ll~~G 134 (136)
T 1d9s_A 114 PVDLAEEQGHRDIARYLHAAT 134 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcC
Confidence 999999999999999999998
No 99
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.89 E-value=3.1e-25 Score=155.99 Aligned_cols=130 Identities=15% Similarity=0.060 Sum_probs=103.1
Q ss_pred cccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCC-ccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcc---eecccC
Q 041026 6 LVHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSG-ISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFF---INKTNN 81 (149)
Q Consensus 6 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~---~~~~~~ 81 (149)
.+..++.++.||||+|++.|+.+++++|++.++.. ..+..+..+.||||+|+..|+.+++++|++ .|++ .+..+.
T Consensus 84 ~l~~~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~-~gad~~~~~i~~~ 162 (376)
T 2aja_A 84 DAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCE-LAPTEIMAMIQAE 162 (376)
T ss_dssp HHHHHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHH-SCTTTHHHHHSHH
T ss_pred HHHHcCCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHh-CCCCccccccCCC
Confidence 34456677889999999999999999999998741 112345567889999999999999999995 4643 222222
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhhhcCCCCCCCCcccccc--ccCCCCCHHHHHH-HcCCHHHHHhhhh
Q 041026 82 QGDTPLHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRM--ENAMGNTVLREAL-FMLGRVNVRRTNT 148 (149)
Q Consensus 82 ~g~tplh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~--~~~~g~t~l~~A~-~~~~~~~~~~L~~ 148 (149)
+ .||||+|+..|+.+++++|+++| ++++ . .+..|.||||+|+ ..|+.+++++|.+
T Consensus 163 ~-~TpLh~Aa~~G~~eiv~~Ll~~g-----a~~~------~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~ 220 (376)
T 2aja_A 163 N-YHAFRLAAENGHLHVLNRLCELA-----PTEA------TAMIQAENYYAFRWAAVGRGHHNVINFLLD 220 (376)
T ss_dssp H-HHHHHHHHHTTCHHHHHHHHHSC-----GGGH------HHHHHHHHHHHHHHHHSTTCCHHHHHHHTT
T ss_pred C-CCHHHHHHHCCCHHHHHHHHHcC-----Cccc------hhccCCCCCCHHHHHHHHCCCHHHHHHHHh
Confidence 3 89999999999999999999998 5443 4 7788999999999 9999999999864
No 100
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.89 E-value=2.6e-22 Score=120.47 Aligned_cols=97 Identities=28% Similarity=0.410 Sum_probs=92.1
Q ss_pred ccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcH
Q 041026 7 VHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTP 86 (149)
Q Consensus 7 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tp 86 (149)
++..|..|.||||+|+..++.+++++|++.+++ ++..+..|.||||+|+..++.+++++|++ .+.+++.+|..|.||
T Consensus 28 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~--~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~ 104 (126)
T 1n0r_A 28 VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD--VNAKDKNGRTPLHLAARNGHLEVVKLLLE-AGADVNAKDKNGRTP 104 (126)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCH
T ss_pred CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC--CcccCCCCCcHHHHHHHcChHHHHHHHHH-cCCCCcccCCCCCCH
Confidence 466788999999999999999999999999998 88899999999999999999999999995 589999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHhh
Q 041026 87 LHCAARAGKLNTATVLVDFA 106 (149)
Q Consensus 87 lh~a~~~g~~~~v~~Ll~~~ 106 (149)
||+|+..|+.+++++|+++|
T Consensus 105 l~~A~~~~~~~~~~~Ll~~G 124 (126)
T 1n0r_A 105 LHLAARNGHLEVVKLLLEAG 124 (126)
T ss_dssp HHHHHHTTCHHHHHHHHHHT
T ss_pred HHHHHHcCcHHHHHHHHHcC
Confidence 99999999999999999998
No 101
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.88 E-value=4e-22 Score=135.24 Aligned_cols=97 Identities=14% Similarity=0.175 Sum_probs=93.0
Q ss_pred ccccCCCCCCHHHHHHHh---CCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCC
Q 041026 7 VHLNDTTNKSPLSLAIEM---ENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQG 83 (149)
Q Consensus 7 ~~~~d~~g~t~l~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g 83 (149)
++..|..|.||||+|+.. |+.+++++|++.+++ ++.+|..|+||||+|+..|+.+++++|++ .|++++.+|..|
T Consensus 162 l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~--in~~d~~g~TpLh~A~~~g~~~~v~~Ll~-~gad~~~~d~~g 238 (278)
T 1dcq_A 162 LANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN--LDKQTGKGSTALHYCCLTDNAECLKLLLR-GKASIEIANESG 238 (278)
T ss_dssp CSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC--TTCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTS
T ss_pred ccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC--ccccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCccCCC
Confidence 666789999999999999 899999999999999 99999999999999999999999999995 699999999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHHhh
Q 041026 84 DTPLHCAARAGKLNTATVLVDFA 106 (149)
Q Consensus 84 ~tplh~a~~~g~~~~v~~Ll~~~ 106 (149)
.||||+|+..|+.+++++|+++|
T Consensus 239 ~tpL~~A~~~~~~~~v~~Ll~~g 261 (278)
T 1dcq_A 239 ETPLDIAKRLKHEHCEELLTQAL 261 (278)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcC
Confidence 99999999999999999999999
No 102
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.88 E-value=5.4e-22 Score=121.18 Aligned_cols=93 Identities=19% Similarity=0.098 Sum_probs=87.1
Q ss_pred cCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHHHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccc
Q 041026 44 SSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPLHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRME 123 (149)
Q Consensus 44 ~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tplh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 123 (149)
..+..|.||||+|+..|+.+++++|++ .+.+++.+|..|.||||+|+..|+.+++++|++.+ ++++ .+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-----~~~~------~~ 72 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQ-NGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHK-----ALVN------TT 72 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTT------CC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC-----Cccc------Cc
Confidence 578899999999999999999999995 58999999999999999999999999999999998 7776 78
Q ss_pred cCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 124 NAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 124 ~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
+..|.||||+|+..++.+++++|.+
T Consensus 73 ~~~g~t~L~~A~~~~~~~~v~~Ll~ 97 (137)
T 3c5r_A 73 GYQNDSPLHDAAKNGHVDIVKLLLS 97 (137)
T ss_dssp CGGGCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 9999999999999999999999875
No 103
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.88 E-value=3.4e-22 Score=117.91 Aligned_cols=92 Identities=20% Similarity=0.208 Sum_probs=68.9
Q ss_pred cCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHHHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccc
Q 041026 44 SSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPLHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRME 123 (149)
Q Consensus 44 ~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tplh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 123 (149)
..+..|.|+||+|+..|+.+++++|++ .+++++.+|..|.||||+|+..|+.+++++|+++| ++++ .+
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~g-----a~~~------~~ 86 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMA-NGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAG-----ADVX------AQ 86 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTT------CC
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCcc------cc
Confidence 445667778888888888888888874 47777777777888888888888888888888777 6665 67
Q ss_pred cCCCCCHHHHHHHcCCHHHHHhhh
Q 041026 124 NAMGNTVLREALFMLGRVNVRRTN 147 (149)
Q Consensus 124 ~~~g~t~l~~A~~~~~~~~~~~L~ 147 (149)
|..|.||||+|+..|+.+++++|+
T Consensus 87 d~~g~tpl~~A~~~~~~~~~~~L~ 110 (110)
T 2zgd_A 87 DKFGKTAFDISIDNGNEDLAEILQ 110 (110)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHC
T ss_pred ccCCCcHHHHHHHcCCHHHHHHhC
Confidence 777888888888888888887764
No 104
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.88 E-value=2.9e-23 Score=133.21 Aligned_cols=119 Identities=8% Similarity=-0.012 Sum_probs=102.9
Q ss_pred CCCHHHHHHHhCCHHHHHHHHHhCCCCccccCC-CCCCcHHHHHHHhCcH----HHHHHHHHhCCcceecccCCCCcHHH
Q 041026 14 NKSPLSLAIEMENTDVLEYILRSLPSGISWSSG-KSPFSLLDVAAKYGHG----EISAKIAQYYPFFINKTNNQGDTPLH 88 (149)
Q Consensus 14 g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~-~~~~~~l~~a~~~~~~----~~~~~Ll~~~~~~~~~~~~~g~tplh 88 (149)
+.++|+.|++.|+.+.++.++..+.. ..+ ..|+||||+|+..++. +++++|++ .|++++.+|..|+||||
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~----~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~-~Gadvn~~d~~g~TpLh 80 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYE----DKESVLKSNILYDVLRNNNDEARYKISMFLIN-KGADIKSRTKEGTTLFF 80 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSS----CHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHH-TTCCSSCCCTTCCCTHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCcc----cccccCCCCHHHHHHHcCCcchHHHHHHHHHH-CCCCCCCCCCCCCcHHH
Confidence 56899999999999999999987654 333 6799999999999875 58999995 69999999999999999
Q ss_pred HHHHcCC------HHHHHHHHHhhhcCCCCCCCCccccccccCCCC-CHHHHHHHcC-----CHHHHHhhhh
Q 041026 89 CAARAGK------LNTATVLVDFAKHIPSTSQPPVDLLRMENAMGN-TVLREALFML-----GRVNVRRTNT 148 (149)
Q Consensus 89 ~a~~~g~------~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~-t~l~~A~~~~-----~~~~~~~L~~ 148 (149)
+|+..++ .+++++|+++| ++++ .+|..|. ||||+|+..+ +.+++++|..
T Consensus 81 ~a~~~~~~~~~~~~~iv~~Ll~~G-----adin------~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~ 141 (186)
T 3t8k_A 81 PLFQGGGNDITGTTELCKIFLEKG-----ADIT------ALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFS 141 (186)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTT-----CCSS------SCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHT
T ss_pred HHHHcCCcchhhHHHHHHHHHHCC-----CCCC------ccCCCcCchHHHHHHHcCCChhhHHHHHHHHHH
Confidence 9999987 57899999999 8888 8999999 9999999944 4568887764
No 105
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.88 E-value=5.2e-22 Score=117.14 Aligned_cols=94 Identities=16% Similarity=0.125 Sum_probs=84.5
Q ss_pred cccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCc
Q 041026 6 LVHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDT 85 (149)
Q Consensus 6 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 85 (149)
.....|.+|.|+||+|+..|+.+++++|++.+++ ++.++..|.||||+|+..++.+++++|++ .|++++.+|..|.|
T Consensus 16 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~t 92 (110)
T 2zgd_A 16 RGSHMGSDLGKKLLEAARAGQDDEVRILMANGAD--VAAKDKNGSTPLHLAARNGHLEVVKLLLE-AGADVXAQDKFGKT 92 (110)
T ss_dssp ------CCHHHHHHHHHHHTCHHHHHHHHHTTCC--TTCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCC
T ss_pred cccccCCccchHHHHHHHcCCHHHHHHHHHcCCC--CCccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCccccccCCCc
Confidence 3456788999999999999999999999999988 88899999999999999999999999995 58999999999999
Q ss_pred HHHHHHHcCCHHHHHHH
Q 041026 86 PLHCAARAGKLNTATVL 102 (149)
Q Consensus 86 plh~a~~~g~~~~v~~L 102 (149)
|||+|+..|+.+++++|
T Consensus 93 pl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 93 AFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHh
Confidence 99999999999999987
No 106
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.88 E-value=8.3e-22 Score=133.48 Aligned_cols=99 Identities=22% Similarity=0.228 Sum_probs=93.2
Q ss_pred cccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCc
Q 041026 6 LVHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDT 85 (149)
Q Consensus 6 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 85 (149)
..+..|..|.||||+|+..|+.+++++|++.+++ ++.+|..|+||||+|+..|+.+++++|++..|++++.+|..|.|
T Consensus 175 ~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad--~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~T 252 (276)
T 4hbd_A 175 INAKASQAGQTALMLAVSHGRVDVVKALLACEAD--VNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGST 252 (276)
T ss_dssp TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCC
T ss_pred CccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC--CCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCC
Confidence 3456678899999999999999999999999999 99999999999999999999999999996579999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhh
Q 041026 86 PLHCAARAGKLNTATVLVDFA 106 (149)
Q Consensus 86 plh~a~~~g~~~~v~~Ll~~~ 106 (149)
|||+|+..|+.+++++|+++.
T Consensus 253 pL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 253 ALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHHHHHHTCHHHHHHHHHHC
T ss_pred HHHHHHHcCCHHHHHHHHhcc
Confidence 999999999999999999886
No 107
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.87 E-value=1.5e-21 Score=141.78 Aligned_cols=97 Identities=14% Similarity=0.173 Sum_probs=90.4
Q ss_pred CCCCCCHHHHHHH---hCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHH
Q 041026 11 DTTNKSPLSLAIE---MENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPL 87 (149)
Q Consensus 11 d~~g~t~l~~a~~---~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tpl 87 (149)
|..|.||||+||. .|+.+++++|++.+++ ++..|..|+||||+|+..|+.+++++|++ .|++++.+|..|.|||
T Consensus 168 ~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~--vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~tpl 244 (497)
T 3lvq_E 168 QAPEELVLHLAVKVANQASLPLVDFIIQNGGH--LDAKAADGNTALHYAALYNQPDCLKLLLK-GRALVGTVNEAGETAL 244 (497)
T ss_dssp CCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC--TTCCCSSSCCHHHHHTTTTCHHHHHHHHH-TCCCCSCCCTTCCCHH
T ss_pred ccccchHHHHHHHhcccccHHHHHHHHHcCCC--CCccCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHH
Confidence 7899999999977 8999999999999999 99999999999999999999999999995 6999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHhhhcCCCCCCC
Q 041026 88 HCAARAGKLNTATVLVDFAKHIPSTSQP 115 (149)
Q Consensus 88 h~a~~~g~~~~v~~Ll~~~~~~~~~~~~ 115 (149)
|+|+..|+.+++++|+++| ++.+
T Consensus 245 ~~A~~~~~~~~~~~Ll~~g-----a~~~ 267 (497)
T 3lvq_E 245 DIARKKHHKECEELLEQAQ-----AGTF 267 (497)
T ss_dssp HHHHHTTCHHHHHHHHHTC-----C---
T ss_pred HHHHHcCCHHHHHHHHHhC-----CCCC
Confidence 9999999999999999999 6555
No 108
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.86 E-value=2.3e-21 Score=116.37 Aligned_cols=91 Identities=21% Similarity=0.093 Sum_probs=82.8
Q ss_pred CCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHHHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccC
Q 041026 46 GKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPLHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENA 125 (149)
Q Consensus 46 ~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tplh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~ 125 (149)
+..|.+|||+|+..|+.+++++|++ .+.+++.+|..|.||||+|+..|+.+++++|++.| ++++ .+|.
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~------~~d~ 71 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVA-KGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKG-----ADIN------APDK 71 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHH-TTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTT-----CCTT------CCCT
T ss_pred ccccchHHHHHHHcCCHHHHHHHHH-cCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcC-----CCCC------cCCC
Confidence 4567899999999999999999995 58899999999999999999999999999999998 7777 7899
Q ss_pred CCCCHHHHHHHcCCHHHHHhhhh
Q 041026 126 MGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 126 ~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
.|+||||+|+..++.+++++|.+
T Consensus 72 ~g~tpL~~A~~~~~~~~v~~Ll~ 94 (123)
T 3aaa_C 72 HHITPLLSAVYEGHVSCVKLLLS 94 (123)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHH
Confidence 99999999999999999999875
No 109
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.86 E-value=9e-22 Score=116.77 Aligned_cols=93 Identities=26% Similarity=0.211 Sum_probs=86.8
Q ss_pred cCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCcHHHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccc
Q 041026 44 SSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDTPLHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRME 123 (149)
Q Consensus 44 ~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~tplh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 123 (149)
.+|..|.||||+|+..++.+++++|++ .+++++.+|..|.||||+|+..|+.+++++|++.| ++++ .+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g-----~~~~------~~ 71 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLS-KGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKG-----ADVN------AR 71 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTT-TTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTT-----CCTT------CC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcC-----CCCc------cc
Confidence 467889999999999999999999995 58999999999999999999999999999999998 7776 78
Q ss_pred cCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 124 NAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 124 ~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
+..|.|||++|+..++.+++++|.+
T Consensus 72 d~~g~tpl~~A~~~~~~~~~~~Ll~ 96 (115)
T 2l6b_A 72 SKDGNTPEHLAKKNGHHEIVKLLDA 96 (115)
T ss_dssp CTTCCCTTHHHHTTTCHHHHHHHHT
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 9999999999999999999999875
No 110
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.86 E-value=1.2e-23 Score=147.86 Aligned_cols=120 Identities=16% Similarity=0.141 Sum_probs=101.2
Q ss_pred ccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCc-cccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceec--ccCCCCc
Q 041026 9 LNDTTNKSPLSLAIEMENTDVLEYILRSLPSGI-SWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINK--TNNQGDT 85 (149)
Q Consensus 9 ~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~-~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~--~~~~g~t 85 (149)
..+..|.||||+|+..|+.+++++|++.+++.. .+..+.. .||||+|+..|+.+++++|++ .|++++. .|..|.|
T Consensus 123 ~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~-~ga~~~~~~~d~~g~T 200 (376)
T 2aja_A 123 VIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCE-LAPTEATAMIQAENYY 200 (376)
T ss_dssp --CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHH-SCGGGHHHHHHHHHHH
T ss_pred HhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHH-cCCccchhccCCCCCC
Confidence 345567899999999999999999999996411 1122222 899999999999999999995 5888877 8889999
Q ss_pred HHHHHH-HcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHcCCHHHHHhhhh
Q 041026 86 PLHCAA-RAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFMLGRVNVRRTNT 148 (149)
Q Consensus 86 plh~a~-~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 148 (149)
|||+|+ ..|+.+++++|++.| . .|.||+++|+..|+.+++++|.+
T Consensus 201 pL~~Aa~~~G~~eiv~~Ll~~g---------------a---~~~taL~~Aa~~g~~evv~lL~~ 246 (376)
T 2aja_A 201 AFRWAAVGRGHHNVINFLLDCP---------------V---MLAYAEIHEFEYGEKYVNPFIAR 246 (376)
T ss_dssp HHHHHHSTTCCHHHHHHHTTSH---------------H---HHHHHHHCTTTTTTTTHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHhCC---------------C---ccchHHHHHHHCCCHHHHHHHHh
Confidence 999999 999999999999977 1 27899999999999999999864
No 111
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.86 E-value=7.7e-21 Score=133.33 Aligned_cols=120 Identities=17% Similarity=0.127 Sum_probs=91.7
Q ss_pred ccccC--CCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCC
Q 041026 7 VHLND--TTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGD 84 (149)
Q Consensus 7 ~~~~d--~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~ 84 (149)
++..| .+|.||||+|+..|+.+++++|++.+++ ++..+..|+||||+|+..++.+++++|++ .|++++.+|..|.
T Consensus 226 vn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad--vn~~d~~G~TpLh~A~~~g~~~~v~~LL~-~Gad~~~~d~~G~ 302 (368)
T 3jue_A 226 VNWVNGGQDNATPLIQATAANSLLACEFLLQNGAN--VNQADSAGRGPLHHATILGHTGLACLFLK-RGADLGARDSEGR 302 (368)
T ss_dssp TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSC
T ss_pred CCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC--CCCCCCCCCCHHHHHHHcCcHHHHHHHHH-CcCCCCCcCCCCC
Confidence 34455 7899999999999999999999999999 89999999999999999999999999995 6999999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHHhhhcCCCCCCCCccccccccCCCCCHHHHHHHc
Q 041026 85 TPLHCAARAGKLNTATVLVDFAKHIPSTSQPPVDLLRMENAMGNTVLREALFM 137 (149)
Q Consensus 85 tplh~a~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~ 137 (149)
||||+|+..|+.+++++|+..+... .+. ...+..+.|+++++...
T Consensus 303 TpL~~A~~~g~~~iv~lLl~~~~~~--~~~------~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 303 DPLTIAMETANADIVTLLRLAKMRE--AEA------AQGQAGDETYLDIFRDF 347 (368)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHC------------------------------
T ss_pred CHHHHHHHCCCHHHHHHHHHcCCCc--ccc------cccCCCCCCHHHHHHHH
Confidence 9999999999999999999988321 111 24566777888776554
No 112
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.84 E-value=2.6e-21 Score=126.99 Aligned_cols=97 Identities=15% Similarity=0.026 Sum_probs=86.5
Q ss_pred ccccCCCCCCHHHHHHHhCCHHHHHHHHHh-CCCCccccCCCCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCCc
Q 041026 7 VHLNDTTNKSPLSLAIEMENTDVLEYILRS-LPSGISWSSGKSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGDT 85 (149)
Q Consensus 7 ~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 85 (149)
++.+|..|.||||+|+..|+.+++++|++. +++ ++..+..|.||||+|+..|+.+++++|++. |++++.+|..|.|
T Consensus 99 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~--~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t 175 (222)
T 3ehr_A 99 VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIE--LNQQNKLGDTALHAAAWKGYADIVQLLLAK-GARTDLRNIEKKL 175 (222)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC--CCCCCTTSCCHHHHHHHHTCHHHHHHHHHH-TCCSCCCCTTSCC
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC--ccccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCccccCCCCC
Confidence 567789999999999999999999999998 888 889999999999999999999999999965 8999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhh
Q 041026 86 PLHCAARAGKLNTATVLVDFA 106 (149)
Q Consensus 86 plh~a~~~g~~~~v~~Ll~~~ 106 (149)
|||+|+..|+.++++.|+..+
T Consensus 176 ~l~~A~~~~~~~~l~~l~~~~ 196 (222)
T 3ehr_A 176 AFDMATNAACASLLKKKQGTD 196 (222)
T ss_dssp HHHHCCSHHHHHHHC------
T ss_pred HHHHhcchhHHHHHHHHhccc
Confidence 999999999999999999998
No 113
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.83 E-value=3e-20 Score=123.78 Aligned_cols=98 Identities=17% Similarity=0.178 Sum_probs=89.6
Q ss_pred cccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCC-CCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCC
Q 041026 6 LVHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSG-KSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGD 84 (149)
Q Consensus 6 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~ 84 (149)
.++.+|..|.||||+|+..|+.+++++|++.+++ ++..+ ..|.||||+|+..|+.+++++|++ .|++++.+|..|.
T Consensus 69 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~--~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~ 145 (244)
T 3ui2_A 69 DVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD--LDHRDMRGGLTALHMAAGYVRPEVVEALVE-LGADIEVEDERGL 145 (244)
T ss_dssp CTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC--TTCCCSSSCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTCC
T ss_pred CCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC--CCcCCCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCC
Confidence 3577889999999999999999999999999999 88777 789999999999999999999995 5999999999999
Q ss_pred cHHHHHH----------------HcCCHHHHHHHHHhh
Q 041026 85 TPLHCAA----------------RAGKLNTATVLVDFA 106 (149)
Q Consensus 85 tplh~a~----------------~~g~~~~v~~Ll~~~ 106 (149)
||||+|+ ..|+.+++++|++.+
T Consensus 146 t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~ 183 (244)
T 3ui2_A 146 TALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQV 183 (244)
T ss_dssp CHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHhc
Confidence 9999988 567889999999875
No 114
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.83 E-value=2.7e-20 Score=118.89 Aligned_cols=87 Identities=16% Similarity=0.159 Sum_probs=79.8
Q ss_pred cccccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCCccccCC-CCCCcHHHHHHHhCcHHHHHHHHHhCCcceecccCCCC
Q 041026 6 LVHLNDTTNKSPLSLAIEMENTDVLEYILRSLPSGISWSSG-KSPFSLLDVAAKYGHGEISAKIAQYYPFFINKTNNQGD 84 (149)
Q Consensus 6 ~~~~~d~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~g~ 84 (149)
.++.+|..|.||||+|+..|+.+++++|++.+++ ++..+ ..|+||||+|+..++.+++++|++. |++++.+|..|.
T Consensus 68 ~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~--~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~ 144 (183)
T 3deo_A 68 DVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD--LDHRDMRGGLTALHMAAGYVRPEVVEALVEL-GADIEVEDERGL 144 (183)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC--TTCCCSSSSCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTSC
T ss_pred CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--CCcCCCCCCCCHHHHHHhcCcHHHHHHHHHc-CCCCcCCCCCCC
Confidence 3577899999999999999999999999999999 88777 8899999999999999999999964 899999999999
Q ss_pred cHHHHHHHcCC
Q 041026 85 TPLHCAARAGK 95 (149)
Q Consensus 85 tplh~a~~~g~ 95 (149)
||||+|+..++
T Consensus 145 tpl~~A~~~~~ 155 (183)
T 3deo_A 145 TALELAREILK 155 (183)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHhcc
Confidence 99999987643
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=70.20 E-value=4.1 Score=18.40 Aligned_cols=18 Identities=11% Similarity=-0.031 Sum_probs=15.1
Q ss_pred HHHHHHcCCHHHHHhhhh
Q 041026 131 LREALFMLGRVNVRRTNT 148 (149)
Q Consensus 131 l~~A~~~~~~~~~~~L~~ 148 (149)
+..||..|.++.++.|+.
T Consensus 17 iyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHTTSCHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHH
Confidence 568888999999998874
No 116
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=44.48 E-value=55 Score=20.36 Aligned_cols=23 Identities=4% Similarity=0.023 Sum_probs=12.0
Q ss_pred CcHHHHHHHcCCH-HHHHHHHHhh
Q 041026 84 DTPLHCAARAGKL-NTATVLVDFA 106 (149)
Q Consensus 84 ~tplh~a~~~g~~-~~v~~Ll~~~ 106 (149)
+..++.+...|+. +++++|.+.+
T Consensus 93 n~af~~~l~lGdv~~~i~lL~~~~ 116 (177)
T 3mkq_B 93 GSMLLNTFYNNSTKERSSIFAEGG 116 (177)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHCC
Confidence 3455555555554 3555555444
Done!