BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041031
(313 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/324 (35%), Positives = 178/324 (54%), Gaps = 31/324 (9%)
Query: 2 FSYNEVRDATSNFSTSLKIGQGSYGSVYLGKL-RGKNAAIKQMKNTKSK----EFSSELK 56
FS E++ A+ NFS +G+G +G VY G+L G A+K++K + + +F +E++
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 57 ILC-KVHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIAL 115
++ VH NL+ L G+ LVY Y NG+++ L + + PL W R +IAL
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR-ERPESQPPLDWPKRQRIAL 146
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
+A+GL Y+H + P +HRDVK +NILLD F A + DFGL KL+++ A R
Sbjct: 147 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR-- 204
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQA--LSRDANPGNNQYTEHRSLVD 233
GT G++APEY+ G + K+DV+ +GV+L+ELITGQ+A L+R AN + L+D
Sbjct: 205 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM------LLD 258
Query: 234 YMLAVFNDTKDFMAKLTECLDPNLTRYHKDS----MLQMALLSKDCVDENWKRRPDMSNA 289
++ + + KL +D +L +KD ++Q+ALL C + RP MS
Sbjct: 259 WVKGLLKEK-----KLEALVDVDLQGNYKDEEVEQLIQVALL---CTQSSPMERPKMSEV 310
Query: 290 AIRLSHILISSK--EWEKMECCHQ 311
L ++ + EW+K E Q
Sbjct: 311 VRMLEGDGLAERWEEWQKEEMFRQ 334
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 174 bits (440), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 167/299 (55%), Gaps = 33/299 (11%)
Query: 2 FSYNEVRDATSNFSTSL------KIGQGSYGSVYLGKLRGKNAAIKQM-------KNTKS 48
FS+ E+++ T+NF K+G+G +G VY G + A+K++
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 49 KEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAW 107
++F E+K++ K H NL+EL+G+++ GD L LVY Y NG+L D L + G PL+W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSW 132
Query: 108 TTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEI 167
R +IA AA G+ ++H+ +++HRD+K++NILLD F AKI+DFGL + E +
Sbjct: 133 HMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ- 188
Query: 168 AAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTE 227
SRIVGT Y+APE +R G +T KSD+Y+FGVVL+E+ITG A+ E
Sbjct: 189 TVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD-----------E 236
Query: 228 HRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDM 286
HR +L + + +D + + +D + S+ M ++ C+ E +RPD+
Sbjct: 237 HRE-PQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDI 294
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 173 bits (439), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 112/324 (34%), Positives = 177/324 (54%), Gaps = 31/324 (9%)
Query: 2 FSYNEVRDATSNFSTSLKIGQGSYGSVYLGKLR-GKNAAIKQMKNTKSK----EFSSELK 56
FS E++ A+ NF +G+G +G VY G+L G A+K++K +++ +F +E++
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 57 ILC-KVHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIAL 115
++ VH NL+ L G+ LVY Y NG+++ L + + PL W R +IAL
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR-ERPESQPPLDWPKRQRIAL 138
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
+A+GL Y+H + P +HRDVK +NILLD F A + DFGL KL+++ A R
Sbjct: 139 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR-- 196
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQA--LSRDANPGNNQYTEHRSLVD 233
G G++APEY+ G + K+DV+ +GV+L+ELITGQ+A L+R AN + L+D
Sbjct: 197 GXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAN------DDDVMLLD 250
Query: 234 YMLAVFNDTKDFMAKLTECLDPNLTRYHKDS----MLQMALLSKDCVDENWKRRPDMSNA 289
++ + + KL +D +L +KD ++Q+ALL C + RP MS
Sbjct: 251 WVKGLLKEK-----KLEALVDVDLQGNYKDEEVEQLIQVALL---CTQSSPMERPKMSEV 302
Query: 290 AIRLSHILISSK--EWEKMECCHQ 311
L ++ + EW+K E Q
Sbjct: 303 VRMLEGDGLAERWEEWQKEEMFRQ 326
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 166/299 (55%), Gaps = 33/299 (11%)
Query: 2 FSYNEVRDATSNFSTSL------KIGQGSYGSVYLGKLRGKNAAIKQM-------KNTKS 48
FS+ E+++ T+NF K+G+G +G VY G + A+K++
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 49 KEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAW 107
++F E+K++ K H NL+EL+G+++ GD L LVY Y NG+L D L + G PL+W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSW 132
Query: 108 TTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEI 167
R +IA AA G+ ++H+ +++HRD+K++NILLD F AKI+DFGL + E +
Sbjct: 133 HMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ- 188
Query: 168 AAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTE 227
RIVGT Y+APE +R G +T KSD+Y+FGVVL+E+ITG A+ E
Sbjct: 189 TVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD-----------E 236
Query: 228 HRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDM 286
HR +L + + +D + + +D + S+ M ++ C+ E +RPD+
Sbjct: 237 HRE-PQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDI 294
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 171 bits (434), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 166/299 (55%), Gaps = 33/299 (11%)
Query: 2 FSYNEVRDATSNFSTSL------KIGQGSYGSVYLGKLRGKNAAIKQM-------KNTKS 48
FS+ E+++ T+NF K+G+G +G VY G + A+K++
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 49 KEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAW 107
++F E+K++ K H NL+EL+G+++ GD L LVY Y NG+L D L + G PL+W
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPLSW 126
Query: 108 TTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEI 167
R +IA AA G+ ++H+ +++HRD+K++NILLD F AKI+DFGL + E +
Sbjct: 127 HMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ- 182
Query: 168 AAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTE 227
RIVGT Y+APE +R G +T KSD+Y+FGVVL+E+ITG A+ E
Sbjct: 183 XVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD-----------E 230
Query: 228 HRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDM 286
HR +L + + +D + + +D + S+ M ++ C+ E +RPD+
Sbjct: 231 HRE-PQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDI 288
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 167 bits (423), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 94/233 (40%), Positives = 138/233 (59%), Gaps = 21/233 (9%)
Query: 2 FSYNEVRDATSNFSTSL------KIGQGSYGSVYLGKLRGKNAAIKQM-------KNTKS 48
FS+ E+++ T+NF K G+G +G VY G + A+K++
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 49 KEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAW 107
++F E+K+ K H NL+EL+G+++ GD L LVY Y NG+L D L + G PL+W
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL--SCLDGTPPLSW 123
Query: 108 TTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEI 167
R +IA AA G+ ++H+ +++HRD+K++NILLD F AKI+DFGL + E +
Sbjct: 124 HXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ- 179
Query: 168 AAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANP 220
SRIVGT Y APE +R G +T KSD+Y+FGVVL+E+ITG A+ P
Sbjct: 180 XVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREP 231
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 153/301 (50%), Gaps = 28/301 (9%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSVYLGKLR-GKNAAIKQMKNTKSKEFSSELKI-----LC 59
++ +AT+NF IG G +G VY G LR G A+K+ S+ C
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 60 KVHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAK 119
+ H +L+ LIG+ + + L+Y+Y +NG L HL+ + ++W R++I + AA+
Sbjct: 93 R-HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLP-TMSMSWEQRLEICIGAAR 150
Query: 120 GLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIV--GT 177
GL Y+H +HRDVK+ NILLD NF KI DFG+ K E+ V GT
Sbjct: 151 GLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK---KGTELGQTHLXXVVKGT 204
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLA 237
GY+ PEY G +T KSDVY+FGVVL E++ + A+ + E +L ++ +
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP------REMVNLAEWAVE 258
Query: 238 VFNDTKDFMAKLTECLDPNLT-RYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHI 296
N+ +L + +DPNL + +S+ + + C+ + + RP M + +L +
Sbjct: 259 SHNN-----GQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYA 313
Query: 297 L 297
L
Sbjct: 314 L 314
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 153/301 (50%), Gaps = 28/301 (9%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSVYLGKLR-GKNAAIKQMKNTKSKEFSSELKI-----LC 59
++ +AT+NF IG G +G VY G LR G A+K+ S+ C
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 60 KVHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAK 119
+ H +L+ LIG+ + + L+Y+Y +NG L HL+ + ++W R++I + AA+
Sbjct: 93 R-HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLP-TMSMSWEQRLEICIGAAR 150
Query: 120 GLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIV--GT 177
GL Y+H +HRDVK+ NILLD NF KI DFG+ K E+ V GT
Sbjct: 151 GLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK---KGTELDQTHLXXVVKGT 204
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLA 237
GY+ PEY G +T KSDVY+FGVVL E++ + A+ + E +L ++ +
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP------REMVNLAEWAVE 258
Query: 238 VFNDTKDFMAKLTECLDPNLT-RYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHI 296
N+ +L + +DPNL + +S+ + + C+ + + RP M + +L +
Sbjct: 259 SHNN-----GQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYA 313
Query: 297 L 297
L
Sbjct: 314 L 314
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 109/201 (54%), Gaps = 12/201 (5%)
Query: 19 KIGQGSYGSVYLGKLRGKNAAIKQMKNT-----KSKEFSSELKILCKV-HSNLIELIGYA 72
KIG GS+G+V+ + G + A+K + + EF E+ I+ ++ H N++ +G
Sbjct: 44 KIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
+L +V EY G+L LH ++ L R+ +A D AKG+ Y+H P
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLH--KSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPI- 160
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVT 192
VHRD+K+ N+L+D + K+ DFGL +L + A+ GT ++APE +RD
Sbjct: 161 VHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAA---GTPEWMAPEVLRDEPSN 217
Query: 193 TKSDVYAFGVVLMELITGQQA 213
KSDVY+FGV+L EL T QQ
Sbjct: 218 EKSDVYSFGVILWELATLQQP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 111/201 (55%), Gaps = 12/201 (5%)
Query: 19 KIGQGSYGSVYLGKLRGKNAAIKQMKNT-----KSKEFSSELKILCKV-HSNLIELIGYA 72
KIG GS+G+V+ + G + A+K + + EF E+ I+ ++ H N++ +G
Sbjct: 44 KIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
+L +V EY G+L LH ++ L R+ +A D AKG+ Y+H P
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLH--KSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPI- 160
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVT 192
VHR++K+ N+L+D + K+ DFGL +L + + +A+ GT ++APE +RD
Sbjct: 161 VHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA---GTPEWMAPEVLRDEPSN 217
Query: 193 TKSDVYAFGVVLMELITGQQA 213
KSDVY+FGV+L EL T QQ
Sbjct: 218 EKSDVYSFGVILWELATLQQP 238
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 155/317 (48%), Gaps = 43/317 (13%)
Query: 1 MFSYNEVRDATSNFSTSLK----IGQGSYGSVYLGKL------RGKNAAIKQMKNTKS-- 48
M S E RD T LK +G+G++GSV + + G+ A+K+++++
Sbjct: 26 MGSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH 85
Query: 49 -KEFSSELKILCKV-HSNLIELIG--YAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGK 102
++F E++IL + H N+++ G Y+AG +L L+ EY G+L D+L H +
Sbjct: 86 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 145
Query: 103 KPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLE 162
K L +T+++ KG+EY+ TK Y+HRD+ T NIL+++ R KI DFGL K+L
Sbjct: 146 KLLQYTSQI------CKGMEYLG--TK-RYIHRDLATRNILVENENRVKIGDFGLTKVLP 196
Query: 163 HSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGN 222
E + APE + + + SDV++FGVVL EL T + + +P
Sbjct: 197 QDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPP- 252
Query: 223 NQYTEHRSLVDYMLAVFNDTKDFMA--KLTECLDPNLTRYHKDSML-QMALLSKDCVDEN 279
++M + ND + M L E L N D ++ ++ +C + N
Sbjct: 253 ---------AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNN 303
Query: 280 WKRRPDMSNAAIRLSHI 296
+RP + A+R+ I
Sbjct: 304 VNQRPSFRDLALRVDQI 320
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 153/312 (49%), Gaps = 43/312 (13%)
Query: 6 EVRDATSNFSTSLK----IGQGSYGSVYLGKL------RGKNAAIKQMKNTKS---KEFS 52
E RD T LK +G+G++GSV + + G+ A+K+++++ ++F
Sbjct: 4 EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE 63
Query: 53 SELKILCKV-HSNLIELIG--YAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAW 107
E++IL + H N+++ G Y+AG +L L+ EY G+L D+L H + K L +
Sbjct: 64 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 123
Query: 108 TTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEI 167
T+++ KG+EY+ TK Y+HRD+ T NIL+++ R KI DFGL K+L E
Sbjct: 124 TSQI------CKGMEYLG--TK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 174
Query: 168 AAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTE 227
+ APE + + + SDV++FGVVL EL T + + +P
Sbjct: 175 XKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPP------ 225
Query: 228 HRSLVDYMLAVFNDTKDFMA--KLTECLDPNLTRYHKDSML-QMALLSKDCVDENWKRRP 284
++M + ND + M L E L N D ++ ++ +C + N +RP
Sbjct: 226 ----AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRP 281
Query: 285 DMSNAAIRLSHI 296
+ A+R+ I
Sbjct: 282 SFRDLALRVDQI 293
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 153/312 (49%), Gaps = 43/312 (13%)
Query: 6 EVRDATSNFSTSLK----IGQGSYGSVYLGKL------RGKNAAIKQMKNTKS---KEFS 52
E RD T LK +G+G++GSV + + G+ A+K+++++ ++F
Sbjct: 3 EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE 62
Query: 53 SELKILCKV-HSNLIELIG--YAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAW 107
E++IL + H N+++ G Y+AG +L L+ EY G+L D+L H + K L +
Sbjct: 63 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQY 122
Query: 108 TTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEI 167
T+++ KG+EY+ TK Y+HRD+ T NIL+++ R KI DFGL K+L E
Sbjct: 123 TSQI------CKGMEYLG--TK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 173
Query: 168 AAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTE 227
+ APE + + + SDV++FGVVL EL T + + +P
Sbjct: 174 XKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPP------ 224
Query: 228 HRSLVDYMLAVFNDTKDFMA--KLTECLDPNLTRYHKDSML-QMALLSKDCVDENWKRRP 284
++M + ND + M L E L N D ++ ++ +C + N +RP
Sbjct: 225 ----AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRP 280
Query: 285 DMSNAAIRLSHI 296
+ A+R+ I
Sbjct: 281 SFRDLALRVDQI 292
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 153/312 (49%), Gaps = 43/312 (13%)
Query: 6 EVRDATSNFSTSLK----IGQGSYGSVYLGKL------RGKNAAIKQMKNTKS---KEFS 52
E RD T LK +G+G++GSV + + G+ A+K+++++ ++F
Sbjct: 5 EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE 64
Query: 53 SELKILCKV-HSNLIELIG--YAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAW 107
E++IL + H N+++ G Y+AG +L L+ EY G+L D+L H + K L +
Sbjct: 65 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 124
Query: 108 TTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEI 167
T+++ KG+EY+ TK Y+HRD+ T NIL+++ R KI DFGL K+L E
Sbjct: 125 TSQI------CKGMEYLG--TK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 175
Query: 168 AAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTE 227
+ APE + + + SDV++FGVVL EL T + + +P
Sbjct: 176 XKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPP------ 226
Query: 228 HRSLVDYMLAVFNDTKDFMA--KLTECLDPNLTRYHKDSML-QMALLSKDCVDENWKRRP 284
++M + ND + M L E L N D ++ ++ +C + N +RP
Sbjct: 227 ----AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRP 282
Query: 285 DMSNAAIRLSHI 296
+ A+R+ I
Sbjct: 283 SFRDLALRVDQI 294
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 153/312 (49%), Gaps = 43/312 (13%)
Query: 6 EVRDATSNFSTSLK----IGQGSYGSVYLGKL------RGKNAAIKQMKNTKS---KEFS 52
E RD T LK +G+G++GSV + + G+ A+K+++++ ++F
Sbjct: 7 EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE 66
Query: 53 SELKILCKV-HSNLIELIG--YAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAW 107
E++IL + H N+++ G Y+AG +L L+ EY G+L D+L H + K L +
Sbjct: 67 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 126
Query: 108 TTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEI 167
T+++ KG+EY+ TK Y+HRD+ T NIL+++ R KI DFGL K+L E
Sbjct: 127 TSQI------CKGMEYLG--TK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 177
Query: 168 AAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTE 227
+ APE + + + SDV++FGVVL EL T + + +P
Sbjct: 178 XKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPP------ 228
Query: 228 HRSLVDYMLAVFNDTKDFMA--KLTECLDPNLTRYHKDSML-QMALLSKDCVDENWKRRP 284
++M + ND + M L E L N D ++ ++ +C + N +RP
Sbjct: 229 ----AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRP 284
Query: 285 DMSNAAIRLSHI 296
+ A+R+ I
Sbjct: 285 SFRDLALRVDQI 296
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 154/313 (49%), Gaps = 43/313 (13%)
Query: 5 NEVRDATSNFSTSLK----IGQGSYGSVYLGKL------RGKNAAIKQMKNTKS---KEF 51
+E RD T LK +G+G++GSV + + G+ A+K+++++ ++F
Sbjct: 2 SEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 61
Query: 52 SSELKILCKV-HSNLIELIG--YAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLA 106
E++IL + H N+++ G Y+AG +L L+ EY G+L D+L H + K L
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 121
Query: 107 WTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPE 166
+T+++ KG+EY+ TK Y+HRD+ T NIL+++ R KI DFGL K+L E
Sbjct: 122 YTSQI------CKGMEYLG--TK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 172
Query: 167 IAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYT 226
+ APE + + + SDV++FGVVL EL T + + +P
Sbjct: 173 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPP----- 224
Query: 227 EHRSLVDYMLAVFNDTKDFMA--KLTECLDPNLTRYHKDSML-QMALLSKDCVDENWKRR 283
++M + ND + M L E L N D ++ ++ +C + N +R
Sbjct: 225 -----AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQR 279
Query: 284 PDMSNAAIRLSHI 296
P + A+R+ I
Sbjct: 280 PSFRDLALRVDQI 292
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 153/311 (49%), Gaps = 43/311 (13%)
Query: 7 VRDATSNFSTSLK----IGQGSYGSVYLGKL------RGKNAAIKQMKNTKS---KEFSS 53
+RD T LK +G+G++GSV + + G+ A+K+++++ ++F
Sbjct: 1 MRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 60
Query: 54 ELKILCKV-HSNLIELIG--YAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWT 108
E++IL + H N+++ G Y+AG +L L+ EY G+L D+L H + K L +T
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 120
Query: 109 TRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIA 168
+++ KG+EY+ TK Y+HRD+ T NIL+++ R KI DFGL K+L E
Sbjct: 121 SQI------CKGMEYLG--TK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 171
Query: 169 AAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEH 228
+ APE + + + SDV++FGVVL EL T + + +P
Sbjct: 172 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPP------- 221
Query: 229 RSLVDYMLAVFNDTKDFMA--KLTECLDPNLTRYHKDSML-QMALLSKDCVDENWKRRPD 285
++M + ND + M L E L N D ++ ++ +C + N +RP
Sbjct: 222 ---AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPS 278
Query: 286 MSNAAIRLSHI 296
+ A+R+ I
Sbjct: 279 FRDLALRVDQI 289
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 153/312 (49%), Gaps = 43/312 (13%)
Query: 6 EVRDATSNFSTSLK----IGQGSYGSVYLGKL------RGKNAAIKQMKNTKS---KEFS 52
E RD T LK +G+G++GSV + + G+ A+K+++++ ++F
Sbjct: 6 EDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE 65
Query: 53 SELKILCKV-HSNLIELIG--YAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAW 107
E++IL + H N+++ G Y+AG +L L+ EY G+L D+L H + K L +
Sbjct: 66 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQY 125
Query: 108 TTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEI 167
T+++ KG+EY+ TK Y+HRD+ T NIL+++ R KI DFGL K+L E
Sbjct: 126 TSQI------CKGMEYLG--TK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 176
Query: 168 AAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTE 227
+ APE + + + SDV++FGVVL EL T + + +P
Sbjct: 177 XKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPP------ 227
Query: 228 HRSLVDYMLAVFNDTKDFMA--KLTECLDPNLTRYHKDSML-QMALLSKDCVDENWKRRP 284
++M + ND + M L E L N D ++ ++ +C + N +RP
Sbjct: 228 ----AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRP 283
Query: 285 DMSNAAIRLSHI 296
+ A+R+ I
Sbjct: 284 SFRDLALRVDQI 295
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 152/310 (49%), Gaps = 43/310 (13%)
Query: 8 RDATSNFSTSLK----IGQGSYGSVYLGKL------RGKNAAIKQMKNTKS---KEFSSE 54
RD T LK +G+G++GSV + + G+ A+K+++++ ++F E
Sbjct: 1 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 60
Query: 55 LKILCKV-HSNLIELIG--YAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTT 109
++IL + H N+++ G Y+AG +L L+ EY G+L D+L H + K L +T+
Sbjct: 61 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 120
Query: 110 RVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAA 169
++ KG+EY+ TK Y+HRD+ T NIL+++ R KI DFGL K+L E
Sbjct: 121 QI------CKGMEYLG--TK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 171
Query: 170 AASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHR 229
+ APE + + + SDV++FGVVL EL T + + +P
Sbjct: 172 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPP-------- 220
Query: 230 SLVDYMLAVFNDTKDFMA--KLTECLDPNLTRYHKDSML-QMALLSKDCVDENWKRRPDM 286
++M + ND + M L E L N D ++ ++ +C + N +RP
Sbjct: 221 --AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 278
Query: 287 SNAAIRLSHI 296
+ A+R+ I
Sbjct: 279 RDLALRVDQI 288
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 148/295 (50%), Gaps = 39/295 (13%)
Query: 19 KIGQGSYGSVYLGKL------RGKNAAIKQMKNTKS---KEFSSELKILCKV-HSNLIEL 68
++G+G++GSV + + G+ A+K+++++ ++F E++IL + H N+++
Sbjct: 15 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 69 IG--YAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAAKGLEYI 124
G Y+AG +L L+ EY G+L D+L H + K L +T+++ KG+EY+
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL 128
Query: 125 HQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
TK Y+HRD+ T NIL+++ R KI DFGL K+L E + APE
Sbjct: 129 G--TK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 185
Query: 185 YVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKD 244
+ + + SDV++FGVVL EL T + + +P ++M + ND +
Sbjct: 186 SLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPP----------AEFMRMIGNDKQG 232
Query: 245 FMA--KLTECLDPNLTRYHKDSML-QMALLSKDCVDENWKRRPDMSNAAIRLSHI 296
M L E L N D ++ ++ +C + N +RP + A+R+ I
Sbjct: 233 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 287
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 148/295 (50%), Gaps = 39/295 (13%)
Query: 19 KIGQGSYGSVYLGKL------RGKNAAIKQMKNTKS---KEFSSELKILCKV-HSNLIEL 68
++G+G++GSV + + G+ A+K+++++ ++F E++IL + H N+++
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 69 IG--YAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAAKGLEYI 124
G Y+AG +L L+ EY G+L D+L H + K L +T+++ KG+EY+
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL 130
Query: 125 HQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
TK Y+HRD+ T NIL+++ R KI DFGL K+L E + APE
Sbjct: 131 G--TK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPE 187
Query: 185 YVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKD 244
+ + + SDV++FGVVL EL T + + +P ++M + ND +
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPP----------AEFMRMIGNDKQG 234
Query: 245 FMA--KLTECLDPNLTRYHKDSML-QMALLSKDCVDENWKRRPDMSNAAIRLSHI 296
M L E L N D ++ ++ +C + N +RP + A+R+ I
Sbjct: 235 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 148/295 (50%), Gaps = 39/295 (13%)
Query: 19 KIGQGSYGSVYLGKL------RGKNAAIKQMKNTKS---KEFSSELKILCKV-HSNLIEL 68
++G+G++GSV + + G+ A+K+++++ ++F E++IL + H N+++
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 69 IG--YAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAAKGLEYI 124
G Y+AG +L L+ EY G+L D+L H + K L +T+++ KG+EY+
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL 130
Query: 125 HQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
TK Y+HRD+ T NIL+++ R KI DFGL K+L E + APE
Sbjct: 131 G--TK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 187
Query: 185 YVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKD 244
+ + + SDV++FGVVL EL T + + +P ++M + ND +
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPP----------AEFMRMIGNDKQG 234
Query: 245 FMA--KLTECLDPNLTRYHKDSML-QMALLSKDCVDENWKRRPDMSNAAIRLSHI 296
M L E L N D ++ ++ +C + N +RP + A+R+ I
Sbjct: 235 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 148/295 (50%), Gaps = 39/295 (13%)
Query: 19 KIGQGSYGSVYLGKL------RGKNAAIKQMKNTKS---KEFSSELKILCKV-HSNLIEL 68
++G+G++GSV + + G+ A+K+++++ ++F E++IL + H N+++
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 69 IG--YAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAAKGLEYI 124
G Y+AG +L L+ EY G+L D+L H + K L +T+++ KG+EY+
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL 148
Query: 125 HQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
TK Y+HRD+ T NIL+++ R KI DFGL K+L E + APE
Sbjct: 149 G--TK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 205
Query: 185 YVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKD 244
+ + + SDV++FGVVL EL T + + +P ++M + ND +
Sbjct: 206 SLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPP----------AEFMRMIGNDKQG 252
Query: 245 FMA--KLTECLDPNLTRYHKDSML-QMALLSKDCVDENWKRRPDMSNAAIRLSHI 296
M L E L N D ++ ++ +C + N +RP + A+R+ I
Sbjct: 253 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 307
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 148/295 (50%), Gaps = 39/295 (13%)
Query: 19 KIGQGSYGSVYLGKL------RGKNAAIKQMKNTKS---KEFSSELKILCKV-HSNLIEL 68
++G+G++GSV + + G+ A+K+++++ ++F E++IL + H N+++
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 69 IG--YAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAAKGLEYI 124
G Y+AG +L L+ EY G+L D+L H + K L +T+++ KG+EY+
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI------CKGMEYL 148
Query: 125 HQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
TK Y+HRD+ T NIL+++ R KI DFGL K+L E + APE
Sbjct: 149 G--TK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 205
Query: 185 YVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKD 244
+ + + SDV++FGVVL EL T + + +P ++M + ND +
Sbjct: 206 SLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPP----------AEFMRMIGNDKQG 252
Query: 245 FMA--KLTECLDPNLTRYHKDSML-QMALLSKDCVDENWKRRPDMSNAAIRLSHI 296
M L E L N D ++ ++ +C + N +RP + A+R+ I
Sbjct: 253 QMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 307
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 111/195 (56%), Gaps = 23/195 (11%)
Query: 20 IGQGSYGSVYLGKLRGKNAAIKQMKN-TKSKEFSSELKILCKV-HSNLIELIGYAA---G 74
IG+G +G V LG RG A+K +KN ++ F +E ++ ++ HSNL++L+G G
Sbjct: 20 IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG 79
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
G L++V EY G+L D+L +G+ L ++ +LD + +EY+ +VH
Sbjct: 80 G--LYIVTEYMAKGSLVDYLR---SRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 131
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG--YLAPEYVRDGCVT 192
RD+ N+L+ + AK++DFGL K A++++ G + APE +R+ +
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFGLTK--------EASSTQDTGKLPVKWTAPEALREAAFS 183
Query: 193 TKSDVYAFGVVLMEL 207
TKSDV++FG++L E+
Sbjct: 184 TKSDVWSFGILLWEI 198
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 153/312 (49%), Gaps = 43/312 (13%)
Query: 6 EVRDATSNFSTSLK----IGQGSYGSVYLGKL------RGKNAAIKQMKNTKS---KEFS 52
E RD T LK +G+G++GSV + + G+ A+K+++++ ++F
Sbjct: 3 EDRDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE 62
Query: 53 SELKILCKV-HSNLIELIG--YAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAW 107
E++IL + H N+++ G Y+AG +L L+ E+ G+L ++L H + K L +
Sbjct: 63 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQY 122
Query: 108 TTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEI 167
T+++ KG+EY+ TK Y+HRD+ T NIL+++ R KI DFGL K+L E
Sbjct: 123 TSQI------CKGMEYLG--TK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 173
Query: 168 AAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTE 227
+ APE + + + SDV++FGVVL EL T + + +P
Sbjct: 174 XKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPP------ 224
Query: 228 HRSLVDYMLAVFNDTKDFMA--KLTECLDPNLTRYHKDSML-QMALLSKDCVDENWKRRP 284
++M + ND + M L E L N D ++ ++ +C + N +RP
Sbjct: 225 ----AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRP 280
Query: 285 DMSNAAIRLSHI 296
+ A+R+ I
Sbjct: 281 SFRDLALRVDQI 292
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 152/310 (49%), Gaps = 43/310 (13%)
Query: 8 RDATSNFSTSLK----IGQGSYGSVYLGKL------RGKNAAIKQMKNTKS---KEFSSE 54
RD T LK +G+G++GSV + + G+ A+K+++++ ++F E
Sbjct: 3 RDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFERE 62
Query: 55 LKILCKV-HSNLIELIG--YAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTT 109
++IL + H N+++ G Y+AG +L L+ EY G+L D+L H + K L +T+
Sbjct: 63 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 122
Query: 110 RVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAA 169
++ KG+EY+ TK Y+HR++ T NIL+++ R KI DFGL K+L E
Sbjct: 123 QI------CKGMEYLG--TK-RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYK 173
Query: 170 AASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHR 229
+ APE + + + SDV++FGVVL EL T + + +P
Sbjct: 174 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT---YIEKSKSPP-------- 222
Query: 230 SLVDYMLAVFNDTKDFMA--KLTECLDPNLTRYHKDSML-QMALLSKDCVDENWKRRPDM 286
++M + ND + M L E L N D ++ ++ +C + N +RP
Sbjct: 223 --AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSF 280
Query: 287 SNAAIRLSHI 296
+ A+R+ I
Sbjct: 281 RDLALRVDQI 290
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 111/195 (56%), Gaps = 23/195 (11%)
Query: 20 IGQGSYGSVYLGKLRGKNAAIKQMKN-TKSKEFSSELKILCKV-HSNLIELIGYAA---G 74
IG+G +G V LG RG A+K +KN ++ F +E ++ ++ HSNL++L+G G
Sbjct: 14 IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG 73
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
G L++V EY G+L D+L +G+ L ++ +LD + +EY+ +VH
Sbjct: 74 G--LYIVTEYMAKGSLVDYLR---SRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 125
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG--YLAPEYVRDGCVT 192
RD+ N+L+ + AK++DFGL K A++++ G + APE +R+ +
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLTK--------EASSTQDTGKLPVKWTAPEALREKKFS 177
Query: 193 TKSDVYAFGVVLMEL 207
TKSDV++FG++L E+
Sbjct: 178 TKSDVWSFGILLWEI 192
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 136/282 (48%), Gaps = 40/282 (14%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMK-----NTKSKEFSSELKILCKV-HSNL 65
S S +IG GS+G+VY GK G + A+K +K + + F +E+ +L K H N+
Sbjct: 36 SEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNI 94
Query: 66 IELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIH 125
+ +GY D+L +V ++ + +L HLH K + IA A+G++Y+H
Sbjct: 95 LLFMGYMTK-DNLAIVTQWCEGSSLYKHLHVQETK----FQMFQLIDIARQTAQGMDYLH 149
Query: 126 QYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEY 185
+HRD+K++NI L KI DFGL ++ + + G+ ++APE
Sbjct: 150 AKN---IIHRDMKSNNIFLHEGLTVKIGDFGLAT-VKSRWSGSQQVEQPTGSVLWMAPEV 205
Query: 186 VR---DGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDT 242
+R + + +SDVY++G+VL EL+TG+ S + +R + +M+
Sbjct: 206 IRMQDNNPFSFQSDVYSYGIVLYELMTGELPYS---------HINNRDQIIFMVG----- 251
Query: 243 KDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRP 284
P+L++ +K+ M L DCV + + RP
Sbjct: 252 -------RGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERP 286
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 111/195 (56%), Gaps = 23/195 (11%)
Query: 20 IGQGSYGSVYLGKLRGKNAAIKQMKN-TKSKEFSSELKILCKV-HSNLIELIGYAA---G 74
IG+G +G V LG RG A+K +KN ++ F +E ++ ++ HSNL++L+G G
Sbjct: 201 IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG 260
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
G L++V EY G+L D+L +G+ L ++ +LD + +EY+ +VH
Sbjct: 261 G--LYIVTEYMAKGSLVDYLR---SRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 312
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG--YLAPEYVRDGCVT 192
RD+ N+L+ + AK++DFGL K A++++ G + APE +R+ +
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLTK--------EASSTQDTGKLPVKWTAPEALREKKFS 364
Query: 193 TKSDVYAFGVVLMEL 207
TKSDV++FG++L E+
Sbjct: 365 TKSDVWSFGILLWEI 379
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 111/195 (56%), Gaps = 23/195 (11%)
Query: 20 IGQGSYGSVYLGKLRGKNAAIKQMKN-TKSKEFSSELKILCKV-HSNLIELIGYAA---G 74
IG+G +G V LG RG A+K +KN ++ F +E ++ ++ HSNL++L+G G
Sbjct: 29 IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG 88
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
G L++V EY G+L D+L +G+ L ++ +LD + +EY+ +VH
Sbjct: 89 G--LYIVTEYMAKGSLVDYLR---SRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 140
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG--YLAPEYVRDGCVT 192
RD+ N+L+ + AK++DFGL K A++++ G + APE +R+ +
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFGLTK--------EASSTQDTGKLPVKWTAPEALREKKFS 192
Query: 193 TKSDVYAFGVVLMEL 207
TKSDV++FG++L E+
Sbjct: 193 TKSDVWSFGILLWEI 207
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 137/285 (48%), Gaps = 45/285 (15%)
Query: 20 IGQGSYGSVYLGKLRGKNAAIKQMKN-TKSKEFSSELKILCKV-HSNLIELIGYAAGGDS 77
+G+G++G V K R K+ AIKQ+++ ++ K F EL+ L +V H N+++L Y A +
Sbjct: 17 VGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKL--YGACLNP 74
Query: 78 LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI---ALDAAKGLEYIHQYTKPYYVH 134
+ LV EYA+ G+L + LH G +PL + T L ++G+ Y+H +H
Sbjct: 75 VCLVMEYAEGGSLYNVLH-----GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 129
Query: 135 RDVKTSNILLDSNFRA-KIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTT 193
RD+K N+LL + KI DFG + +I + G+ ++APE +
Sbjct: 130 RDLKPPNLLLVAGGTVLKICDFGT------ACDIQTHMTNNKGSAAWMAPEVFEGSNYSE 183
Query: 194 KSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDFMAK-LTEC 252
K DV+++G++L E+IT ++ P M AV N T+ + K L +
Sbjct: 184 KCDVFSWGIILWEVITRRKPFDEIGGPA----------FRIMWAVHNGTRPPLIKNLPKP 233
Query: 253 LDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHIL 297
++ +TR C ++ +RP M ++H++
Sbjct: 234 IESLMTR---------------CWSKDPSQRPSMEEIVKIMTHLM 263
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 108/199 (54%), Gaps = 17/199 (8%)
Query: 17 SLKIGQGSYGSVYLGKLRGKN-AAIKQMK-NTKSKE-FSSELKILCKV-HSNLIELIGYA 72
+K+GQG +G V++G G AIK +K T S E F E +++ K+ H L++L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGK--KPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ + +++V EY G+L D L KG+ K L V +A A G+ Y+ +
Sbjct: 83 SE-EPIYIVIEYMSKGSLLDFL-----KGEMGKYLRLPQLVDMAAQIASGMAYVERMN-- 134
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
YVHRD++ +NIL+ N K+ADFGL +L+E + A ++ + APE G
Sbjct: 135 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF--PIKWTAPEAALYGR 191
Query: 191 VTTKSDVYAFGVVLMELIT 209
T KSDV++FG++L EL T
Sbjct: 192 FTIKSDVWSFGILLTELTT 210
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 108/199 (54%), Gaps = 17/199 (8%)
Query: 17 SLKIGQGSYGSVYLGKLRGKN-AAIKQMK-NTKSKE-FSSELKILCKV-HSNLIELIGYA 72
+K+GQG +G V++G G AIK +K T S E F E +++ K+ H L++L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVV 82
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGK--KPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ + +++V EY G+L D L KG+ K L V +A A G+ Y+ +
Sbjct: 83 SE-EPIYIVTEYMSKGSLLDFL-----KGEMGKYLRLPQLVDMAAQIASGMAYVERMN-- 134
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
YVHRD++ +NIL+ N K+ADFGL +L+E + A ++ + APE G
Sbjct: 135 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGR 191
Query: 191 VTTKSDVYAFGVVLMELIT 209
T KSDV++FG++L EL T
Sbjct: 192 FTIKSDVWSFGILLTELTT 210
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 137/285 (48%), Gaps = 45/285 (15%)
Query: 20 IGQGSYGSVYLGKLRGKNAAIKQMKN-TKSKEFSSELKILCKV-HSNLIELIGYAAGGDS 77
+G+G++G V K R K+ AIKQ+++ ++ K F EL+ L +V H N+++L Y A +
Sbjct: 16 VGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKL--YGACLNP 73
Query: 78 LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI---ALDAAKGLEYIHQYTKPYYVH 134
+ LV EYA+ G+L + LH G +PL + T L ++G+ Y+H +H
Sbjct: 74 VCLVMEYAEGGSLYNVLH-----GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 128
Query: 135 RDVKTSNILLDSNFRA-KIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTT 193
RD+K N+LL + KI DFG + +I + G+ ++APE +
Sbjct: 129 RDLKPPNLLLVAGGTVLKICDFGT------ACDIQTHMTNNKGSAAWMAPEVFEGSNYSE 182
Query: 194 KSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDFMAK-LTEC 252
K DV+++G++L E+IT ++ P M AV N T+ + K L +
Sbjct: 183 KCDVFSWGIILWEVITRRKPFDEIGGPA----------FRIMWAVHNGTRPPLIKNLPKP 232
Query: 253 LDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHIL 297
++ +TR C ++ +RP M ++H++
Sbjct: 233 IESLMTR---------------CWSKDPSQRPSMEEIVKIMTHLM 262
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 136/288 (47%), Gaps = 42/288 (14%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNT-----KSKEFSSELKILCK 60
E+ D + +IG GS+G+VY GK G + A+K + T + + F +E+ +L K
Sbjct: 4 EIPDG--QITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60
Query: 61 V-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAK 119
H N++ +GY+ L +V ++ + +L HLH K + IA A+
Sbjct: 61 TRHVNILLFMGYSTA-PQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQ 115
Query: 120 GLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG 179
G++Y+H + +HRD+K++NI L + KI DFGL + + + ++ G+
Sbjct: 116 GMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATV-KSRWSGSHQFEQLSGSIL 171
Query: 180 YLAPEYVR---DGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYML 236
++APE +R + +SDVYAFG+VL EL+TGQ S N R + +M+
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN---------RDQIIFMV 222
Query: 237 AVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRP 284
L P+L++ + M L +C+ + RP
Sbjct: 223 G------------RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 258
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 108/199 (54%), Gaps = 17/199 (8%)
Query: 17 SLKIGQGSYGSVYLGKLRGKN-AAIKQMK-NTKSKE-FSSELKILCKV-HSNLIELIGYA 72
+K+GQG +G V++G G AIK +K T S E F E +++ K+ H L++L
Sbjct: 14 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 73
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGK--KPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ + +++V EY G+L D L KG+ K L V +A A G+ Y+ +
Sbjct: 74 SE-EPIYIVTEYMSKGSLLDFL-----KGEMGKYLRLPQLVDMAAQIASGMAYVERMN-- 125
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
YVHRD++ +NIL+ N K+ADFGL +L+E + A ++ + APE G
Sbjct: 126 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGR 182
Query: 191 VTTKSDVYAFGVVLMELIT 209
T KSDV++FG++L EL T
Sbjct: 183 FTIKSDVWSFGILLTELTT 201
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 108/199 (54%), Gaps = 17/199 (8%)
Query: 17 SLKIGQGSYGSVYLGKLRGKN-AAIKQMK-NTKSKE-FSSELKILCKV-HSNLIELIGYA 72
+K+GQG +G V++G G AIK +K T S E F E +++ K+ H L++L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGK--KPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ + +++V EY G+L D L KG+ K L V +A A G+ Y+ +
Sbjct: 83 SE-EPIYIVIEYMSKGSLLDFL-----KGEMGKYLRLPQLVDMAAQIASGMAYVERMN-- 134
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
YVHRD++ +NIL+ N K+ADFGL +L+E + A ++ + APE G
Sbjct: 135 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGR 191
Query: 191 VTTKSDVYAFGVVLMELIT 209
T KSDV++FG++L EL T
Sbjct: 192 FTIKSDVWSFGILLTELTT 210
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 108/199 (54%), Gaps = 17/199 (8%)
Query: 17 SLKIGQGSYGSVYLGKLRGKN-AAIKQMK-NTKSKE-FSSELKILCKV-HSNLIELIGYA 72
+K+GQG +G V++G G AIK +K T S E F E +++ K+ H L++L
Sbjct: 12 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 71
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGK--KPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ + +++V EY G+L D L KG+ K L V +A A G+ Y+ +
Sbjct: 72 SE-EPIYIVTEYMSKGSLLDFL-----KGEMGKYLRLPQLVDMAAQIASGMAYVERMN-- 123
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
YVHRD++ +NIL+ N K+ADFGL +L+E + A ++ + APE G
Sbjct: 124 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGR 180
Query: 191 VTTKSDVYAFGVVLMELIT 209
T KSDV++FG++L EL T
Sbjct: 181 FTIKSDVWSFGILLTELTT 199
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 108/199 (54%), Gaps = 17/199 (8%)
Query: 17 SLKIGQGSYGSVYLGKLRGKN-AAIKQMK-NTKSKE-FSSELKILCKV-HSNLIELIGYA 72
+K+GQG +G V++G G AIK +K T S E F E +++ K+ H L++L
Sbjct: 16 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 75
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGK--KPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ + +++V EY G+L D L KG+ K L V +A A G+ Y+ +
Sbjct: 76 SE-EPIYIVTEYMSKGSLLDFL-----KGETGKYLRLPQLVDMAAQIASGMAYVERMN-- 127
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
YVHRD++ +NIL+ N K+ADFGL +L+E + A ++ + APE G
Sbjct: 128 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGR 184
Query: 191 VTTKSDVYAFGVVLMELIT 209
T KSDV++FG++L EL T
Sbjct: 185 FTIKSDVWSFGILLTELTT 203
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 107/199 (53%), Gaps = 17/199 (8%)
Query: 17 SLKIGQGSYGSVYLGKLRGKN-AAIKQMK-NTKSKE-FSSELKILCKV-HSNLIELIGYA 72
+K+GQG +G V++G G AIK +K T S E F E +++ K+ H L++L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGK--KPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ + +++V EY G L D L KG+ K L V +A A G+ Y+ +
Sbjct: 83 SE-EPIYIVMEYMSKGCLLDFL-----KGEMGKYLRLPQLVDMAAQIASGMAYVERMN-- 134
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
YVHRD++ +NIL+ N K+ADFGL +L+E + A ++ + APE G
Sbjct: 135 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGR 191
Query: 191 VTTKSDVYAFGVVLMELIT 209
T KSDV++FG++L EL T
Sbjct: 192 FTIKSDVWSFGILLTELTT 210
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 108/199 (54%), Gaps = 17/199 (8%)
Query: 17 SLKIGQGSYGSVYLGKLRGKN-AAIKQMK-NTKSKE-FSSELKILCKV-HSNLIELIGYA 72
+K+GQG +G V++G G AIK +K T S E F E +++ K+ H L++L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGK--KPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ + +++V EY G+L D L KG+ K L V +A A G+ Y+ +
Sbjct: 83 SE-EPIYIVTEYMSKGSLLDFL-----KGEMGKYLRLPQLVDMAAQIASGMAYVERMN-- 134
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
YVHRD++ +NIL+ N K+ADFGL +L+E + A ++ + APE G
Sbjct: 135 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGR 191
Query: 191 VTTKSDVYAFGVVLMELIT 209
T KSDV++FG++L EL T
Sbjct: 192 FTIKSDVWSFGILLTELTT 210
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 108/198 (54%), Gaps = 17/198 (8%)
Query: 18 LKIGQGSYGSVYLGKLRGKN-AAIKQMK-NTKSKE-FSSELKILCKV-HSNLIELIGYAA 73
+K+GQG +G V++G G AIK +K T S E F E +++ K+ H L++L +
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 74 GGDSLFLVYEYAQNGALSDHLHWPSVKGK--KPLAWTTRVQIALDAAKGLEYIHQYTKPY 131
+ +++V EY G+L D L KG+ K L V +A A G+ Y+ +
Sbjct: 250 E-EPIYIVTEYMSKGSLLDFL-----KGETGKYLRLPQLVDMAAQIASGMAYVERMN--- 300
Query: 132 YVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCV 191
YVHRD++ +NIL+ N K+ADFGL +L+E + A ++ + APE G
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRF 358
Query: 192 TTKSDVYAFGVVLMELIT 209
T KSDV++FG++L EL T
Sbjct: 359 TIKSDVWSFGILLTELTT 376
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 108/199 (54%), Gaps = 17/199 (8%)
Query: 17 SLKIGQGSYGSVYLGKLRGKN-AAIKQMK-NTKSKE-FSSELKILCKV-HSNLIELIGYA 72
+K+GQG +G V++G G AIK +K T S E F E +++ K+ H L++L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGK--KPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ + +++V EY G+L D L KG+ K L V +A A G+ Y+ +
Sbjct: 83 SE-EPIYIVCEYMSKGSLLDFL-----KGEMGKYLRLPQLVDMAAQIASGMAYVERMN-- 134
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
YVHRD++ +NIL+ N K+ADFGL +L+E + A ++ + APE G
Sbjct: 135 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGR 191
Query: 191 VTTKSDVYAFGVVLMELIT 209
T KSDV++FG++L EL T
Sbjct: 192 FTIKSDVWSFGILLTELTT 210
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 107/198 (54%), Gaps = 17/198 (8%)
Query: 18 LKIGQGSYGSVYLGKLRGKN-AAIKQMK--NTKSKEFSSELKILCKV-HSNLIELIGYAA 73
+K+GQG +G V++G G AIK +K N + F E +++ K+ H L++L +
Sbjct: 191 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 74 GGDSLFLVYEYAQNGALSDHLHWPSVKGK--KPLAWTTRVQIALDAAKGLEYIHQYTKPY 131
+ +++V EY G+L D L KG+ K L V +A A G+ Y+ +
Sbjct: 251 E-EPIYIVTEYMSKGSLLDFL-----KGEMGKYLRLPQLVDMAAQIASGMAYVERMN--- 301
Query: 132 YVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCV 191
YVHRD++ +NIL+ N K+ADFGL +L+E + A ++ + APE G
Sbjct: 302 YVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKF--PIKWTAPEAALYGRF 359
Query: 192 TTKSDVYAFGVVLMELIT 209
T KSDV++FG++L EL T
Sbjct: 360 TIKSDVWSFGILLTELTT 377
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 136/288 (47%), Gaps = 42/288 (14%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNT-----KSKEFSSELKILCK 60
E+ D + +IG GS+G+VY GK G + A+K + T + + F +E+ +L K
Sbjct: 4 EIPDG--QITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60
Query: 61 V-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAK 119
H N++ +GY+ L +V ++ + +L HLH K + IA A+
Sbjct: 61 TRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQ 115
Query: 120 GLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG 179
G++Y+H + +HRD+K++NI L + KI DFGL + + + ++ G+
Sbjct: 116 GMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATV-KSRWSGSHQFEQLSGSIL 171
Query: 180 YLAPEYVR---DGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYML 236
++APE +R + +SDVYAFG+VL EL+TGQ S N R + +M+
Sbjct: 172 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN---------RDQIIFMV 222
Query: 237 AVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRP 284
L P+L++ + M L +C+ + RP
Sbjct: 223 G------------RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 258
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 136/288 (47%), Gaps = 42/288 (14%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNT-----KSKEFSSELKILCK 60
E+ D + +IG GS+G+VY GK G + A+K + T + + F +E+ +L K
Sbjct: 9 EIPDG--QITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRK 65
Query: 61 V-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAK 119
H N++ +GY+ L +V ++ + +L HLH K + IA A+
Sbjct: 66 TRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQ 120
Query: 120 GLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG 179
G++Y+H + +HRD+K++NI L + KI DFGL + + + ++ G+
Sbjct: 121 GMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATV-KSRWSGSHQFEQLSGSIL 176
Query: 180 YLAPEYVR---DGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYML 236
++APE +R + +SDVYAFG+VL EL+TGQ S N R + +M+
Sbjct: 177 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN---------RDQIIFMV 227
Query: 237 AVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRP 284
L P+L++ + M L +C+ + RP
Sbjct: 228 G------------RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 263
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 136/288 (47%), Gaps = 42/288 (14%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNT-----KSKEFSSELKILCK 60
E+ D + +IG GS+G+VY GK G + A+K + T + + F +E+ +L K
Sbjct: 9 EIPDG--QITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRK 65
Query: 61 V-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAK 119
H N++ +GY+ L +V ++ + +L HLH K + IA A+
Sbjct: 66 TRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQ 120
Query: 120 GLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG 179
G++Y+H + +HRD+K++NI L + KI DFGL + + + ++ G+
Sbjct: 121 GMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATV-KSRWSGSHQFEQLSGSIL 176
Query: 180 YLAPEYVR---DGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYML 236
++APE +R + +SDVYAFG+VL EL+TGQ S N R + +M+
Sbjct: 177 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN---------RDQIIFMV 227
Query: 237 AVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRP 284
L P+L++ + M L +C+ + RP
Sbjct: 228 G------------RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 263
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 107/199 (53%), Gaps = 17/199 (8%)
Query: 17 SLKIGQGSYGSVYLGKLRGKN-AAIKQMK-NTKSKE-FSSELKILCKV-HSNLIELIGYA 72
+K+GQG +G V++G G AIK +K T S E F E +++ K+ H L++L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGK--KPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ + +++V EY G L D L KG+ K L V +A A G+ Y+ +
Sbjct: 83 SE-EPIYIVTEYMSKGCLLDFL-----KGEMGKYLRLPQLVDMAAQIASGMAYVERMN-- 134
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
YVHRD++ +NIL+ N K+ADFGL +L+E + A ++ + APE G
Sbjct: 135 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGR 191
Query: 191 VTTKSDVYAFGVVLMELIT 209
T KSDV++FG++L EL T
Sbjct: 192 FTIKSDVWSFGILLTELTT 210
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 108/198 (54%), Gaps = 17/198 (8%)
Query: 18 LKIGQGSYGSVYLGKLRGKN-AAIKQMK-NTKSKE-FSSELKILCKV-HSNLIELIGYAA 73
+K+GQG +G V++G G AIK +K T S E F E +++ K+ H L++L +
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 74 GGDSLFLVYEYAQNGALSDHLHWPSVKGK--KPLAWTTRVQIALDAAKGLEYIHQYTKPY 131
+ +++V EY G+L D L KG+ K L V +A A G+ Y+ +
Sbjct: 250 E-EPIYIVTEYMSKGSLLDFL-----KGETGKYLRLPQLVDMAAQIASGMAYVERMN--- 300
Query: 132 YVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCV 191
YVHRD++ +NIL+ N K+ADFGL +L+E + A ++ + APE G
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRF 358
Query: 192 TTKSDVYAFGVVLMELIT 209
T KSDV++FG++L EL T
Sbjct: 359 TIKSDVWSFGILLTELTT 376
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 132/275 (48%), Gaps = 40/275 (14%)
Query: 19 KIGQGSYGSVYLGKLRGKNAAIKQMKNT-----KSKEFSSELKILCKV-HSNLIELIGYA 72
+IG GS+G+VY GK G + A+K + T + + F +E+ +L K H N++ +GY+
Sbjct: 17 RIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
L +V ++ + +L HLH K + IA A+G++Y+H +
Sbjct: 76 TK-PQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKS---I 127
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVR---DG 189
+HRD+K++NI L + KI DFGL + + + ++ G+ ++APE +R
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATV-KSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 186
Query: 190 CVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDFMAKL 249
+ +SDVYAFG+VL EL+TGQ S N R + +M+
Sbjct: 187 PYSFQSDVYAFGIVLYELMTGQLPYSNINN---------RDQIIFMVG------------ 225
Query: 250 TECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRP 284
L P+L++ + M L +C+ + RP
Sbjct: 226 RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 260
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 132/275 (48%), Gaps = 40/275 (14%)
Query: 19 KIGQGSYGSVYLGKLRGKNAAIKQMKNT-----KSKEFSSELKILCKV-HSNLIELIGYA 72
+IG GS+G+VY GK G + A+K + T + + F +E+ +L K H N++ +GY+
Sbjct: 43 RIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
L +V ++ + +L HLH K + IA A+G++Y+H +
Sbjct: 102 TK-PQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKS---I 153
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVR---DG 189
+HRD+K++NI L + KI DFGL + + + ++ G+ ++APE +R
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATV-KSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 190 CVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDFMAKL 249
+ +SDVYAFG+VL EL+TGQ S N R + +M+
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLPYSNINN---------RDQIIFMVG------------ 251
Query: 250 TECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRP 284
L P+L++ + M L +C+ + RP
Sbjct: 252 RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 286
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 132/275 (48%), Gaps = 40/275 (14%)
Query: 19 KIGQGSYGSVYLGKLRGKNAAIKQMKNT-----KSKEFSSELKILCKV-HSNLIELIGYA 72
+IG GS+G+VY GK G + A+K + T + + F +E+ +L K H N++ +GY+
Sbjct: 42 RIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
L +V ++ + +L HLH K + IA A+G++Y+H +
Sbjct: 101 TK-PQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKS---I 152
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVR---DG 189
+HRD+K++NI L + KI DFGL + + + ++ G+ ++APE +R
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATV-KSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 211
Query: 190 CVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDFMAKL 249
+ +SDVYAFG+VL EL+TGQ S N R + +M+
Sbjct: 212 PYSFQSDVYAFGIVLYELMTGQLPYSNINN---------RDQIIFMVG------------ 250
Query: 250 TECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRP 284
L P+L++ + M L +C+ + RP
Sbjct: 251 RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 285
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 107/205 (52%), Gaps = 23/205 (11%)
Query: 19 KIGQGSYGSVYL------GKLRGKNAAIKQMKNT---KSKEFSSELKILCKVHSNLI--- 66
++G+G++GSV L G G A+KQ++++ + ++F E++IL +HS+ I
Sbjct: 17 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 76
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAAKGLEYI 124
+ Y G SL LV EY +G L D L H + + L +++++ KG+EY+
Sbjct: 77 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGMEYL 130
Query: 125 HQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
VHRD+ NIL++S KIADFGL KLL + + APE
Sbjct: 131 GSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE 187
Query: 185 YVRDGCVTTKSDVYAFGVVLMELIT 209
+ D + +SDV++FGVVL EL T
Sbjct: 188 SLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 107/199 (53%), Gaps = 17/199 (8%)
Query: 17 SLKIGQGSYGSVYLGKLRGKN-AAIKQMK-NTKSKE-FSSELKILCKV-HSNLIELIGYA 72
+K+GQG +G V++G G AIK +K T S E F E +++ K+ H L++L
Sbjct: 13 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 72
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGK--KPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ + + +V EY G+L D L KG+ K L V +A A G+ Y+ +
Sbjct: 73 SE-EPIXIVTEYMSKGSLLDFL-----KGETGKYLRLPQLVDMAAQIASGMAYVERMN-- 124
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
YVHRD++ +NIL+ N K+ADFGL +L+E + A ++ + APE G
Sbjct: 125 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF--PIKWTAPEAALYGR 181
Query: 191 VTTKSDVYAFGVVLMELIT 209
T KSDV++FG++L EL T
Sbjct: 182 FTIKSDVWSFGILLTELTT 200
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 108/198 (54%), Gaps = 17/198 (8%)
Query: 18 LKIGQGSYGSVYLGKLRGKN-AAIKQMK-NTKSKE-FSSELKILCKV-HSNLIELIGYAA 73
+K+GQG +G V++G G AIK +K T S E F E +++ K+ H L++L +
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 74 GGDSLFLVYEYAQNGALSDHLHWPSVKGK--KPLAWTTRVQIALDAAKGLEYIHQYTKPY 131
+ +++V EY G+L D L KG+ K L V +A A G+ Y+ +
Sbjct: 250 E-EPIYIVGEYMSKGSLLDFL-----KGETGKYLRLPQLVDMAAQIASGMAYVERMN--- 300
Query: 132 YVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCV 191
YVHRD++ +NIL+ N K+ADFGL +L+E + A ++ + APE G
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRF 358
Query: 192 TTKSDVYAFGVVLMELIT 209
T KSDV++FG++L EL T
Sbjct: 359 TIKSDVWSFGILLTELTT 376
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 108/198 (54%), Gaps = 17/198 (8%)
Query: 18 LKIGQGSYGSVYLGKLRGKN-AAIKQMK-NTKSKE-FSSELKILCKV-HSNLIELIGYAA 73
+K+GQG +G V++G G AIK +K T S E F E +++ K+ H L++L +
Sbjct: 273 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 74 GGDSLFLVYEYAQNGALSDHLHWPSVKGK--KPLAWTTRVQIALDAAKGLEYIHQYTKPY 131
+ +++V EY G+L D L KG+ K L V +A A G+ Y+ +
Sbjct: 333 E-EPIYIVTEYMSKGSLLDFL-----KGETGKYLRLPQLVDMAAQIASGMAYVERMN--- 383
Query: 132 YVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCV 191
YVHRD++ +NIL+ N K+ADFGL +L+E + A ++ + APE G
Sbjct: 384 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRF 441
Query: 192 TTKSDVYAFGVVLMELIT 209
T KSDV++FG++L EL T
Sbjct: 442 TIKSDVWSFGILLTELTT 459
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 107/205 (52%), Gaps = 23/205 (11%)
Query: 19 KIGQGSYGSVYL------GKLRGKNAAIKQMKNT---KSKEFSSELKILCKVHSNLI--- 66
++G+G++GSV L G G A+KQ++++ + ++F E++IL +HS+ I
Sbjct: 30 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 89
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAAKGLEYI 124
+ Y G SL LV EY +G L D L H + + L +++++ KG+EY+
Sbjct: 90 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGMEYL 143
Query: 125 HQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
VHRD+ NIL++S KIADFGL KLL + + APE
Sbjct: 144 GSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE 200
Query: 185 YVRDGCVTTKSDVYAFGVVLMELIT 209
+ D + +SDV++FGVVL EL T
Sbjct: 201 SLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 132/276 (47%), Gaps = 42/276 (15%)
Query: 19 KIGQGSYGSVYLGKLRGKNAAIKQMKNT-----KSKEFSSELKILCKV-HSNLIELIGYA 72
+IG GS+G+VY GK G + A+K + T + + F +E+ +L K H N++ +GY+
Sbjct: 35 RIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
L +V ++ + +L HLH K + IA A+G++Y+H +
Sbjct: 94 TK-PQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKS---I 145
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAA-SRIVGTFGYLAPEYVR---D 188
+HRD+K++NI L + KI DFGL E S + ++ G+ ++APE +R
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLAT--EKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 203
Query: 189 GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDFMAK 248
+ +SDVYAFG+VL EL+TGQ S N R + +M+
Sbjct: 204 NPYSFQSDVYAFGIVLYELMTGQLPYSNINN---------RDQIIFMVG----------- 243
Query: 249 LTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRP 284
L P+L++ + M L +C+ + RP
Sbjct: 244 -RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 278
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 108/199 (54%), Gaps = 17/199 (8%)
Query: 17 SLKIGQGSYGSVYLGKLRGKN-AAIKQMK-NTKSKE-FSSELKILCKV-HSNLIELIGYA 72
+K+GQG +G V++G G AIK +K T S E F E +++ K+ H L++L
Sbjct: 20 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 79
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGK--KPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ + +++V EY G+L D L KG+ K L V ++ A G+ Y+ +
Sbjct: 80 SE-EPIYIVTEYMNKGSLLDFL-----KGETGKYLRLPQLVDMSAQIASGMAYVERMN-- 131
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
YVHRD++ +NIL+ N K+ADFGL +L+E + A ++ + APE G
Sbjct: 132 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKF--PIKWTAPEAALYGR 188
Query: 191 VTTKSDVYAFGVVLMELIT 209
T KSDV++FG++L EL T
Sbjct: 189 FTIKSDVWSFGILLTELTT 207
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 132/276 (47%), Gaps = 42/276 (15%)
Query: 19 KIGQGSYGSVYLGKLRGKNAAIKQMKNT-----KSKEFSSELKILCKV-HSNLIELIGYA 72
+IG GS+G+VY GK G + A+K + T + + F +E+ +L K H N++ +GY+
Sbjct: 43 RIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
L +V ++ + +L HLH K + IA A+G++Y+H +
Sbjct: 102 TK-PQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQGMDYLHAKS---I 153
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAA-SRIVGTFGYLAPEYVR---D 188
+HRD+K++NI L + KI DFGL E S + ++ G+ ++APE +R
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLAT--EKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 211
Query: 189 GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDFMAK 248
+ +SDVYAFG+VL EL+TGQ S N R + +M+
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQLPYSNINN---------RDQIIFMVG----------- 251
Query: 249 LTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRP 284
L P+L++ + M L +C+ + RP
Sbjct: 252 -RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 286
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 107/205 (52%), Gaps = 23/205 (11%)
Query: 19 KIGQGSYGSVYL------GKLRGKNAAIKQMKNT---KSKEFSSELKILCKVHSNLI--- 66
++G+G++GSV L G G A+KQ++++ + ++F E++IL +HS+ I
Sbjct: 18 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 77
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAAKGLEYI 124
+ Y G SL LV EY +G L D L H + + L +++++ KG+EY+
Sbjct: 78 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGMEYL 131
Query: 125 HQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
VHRD+ NIL++S KIADFGL KLL + + APE
Sbjct: 132 GSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPE 188
Query: 185 YVRDGCVTTKSDVYAFGVVLMELIT 209
+ D + +SDV++FGVVL EL T
Sbjct: 189 SLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 110/211 (52%), Gaps = 28/211 (13%)
Query: 20 IGQGSYGSVYLGKLRGK----NAAIKQMKNTKSKE----FSSELKILCKV--HSNLIELI 69
IG+G++G V +++ +AAIK+MK SK+ F+ EL++LCK+ H N+I L+
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 82
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKP-----------LAWTTRVQIALDAA 118
G L+L EYA +G L D L V P L+ + A D A
Sbjct: 83 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 142
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTF 178
+G++Y+ Q ++HRD+ NIL+ N+ AKIADFGL + E+ +
Sbjct: 143 RGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVKKTMGRLPV 195
Query: 179 GYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++A E + TT SDV+++GV+L E+++
Sbjct: 196 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 108/199 (54%), Gaps = 17/199 (8%)
Query: 17 SLKIGQGSYGSVYLGKLRGKN-AAIKQMK-NTKSKE-FSSELKILCKV-HSNLIELIGYA 72
+K+GQG +G V++G G AIK +K T S E F E +++ K+ H L++L
Sbjct: 20 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 79
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGK--KPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ + +++V EY G+L D L KG+ K L V ++ A G+ Y+ +
Sbjct: 80 SE-EPIYIVTEYMNKGSLLDFL-----KGETGKYLRLPQLVDMSAQIASGMAYVERMN-- 131
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
YVHRD++ +NIL+ N K+ADFGL +L+E + A ++ + APE G
Sbjct: 132 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGR 188
Query: 191 VTTKSDVYAFGVVLMELIT 209
T KSDV++FG++L EL T
Sbjct: 189 FTIKSDVWSFGILLTELTT 207
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 136/289 (47%), Gaps = 44/289 (15%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNT-----KSKEFSSELKILCK 60
E+ D + +IG GS+G+VY GK G + A+K + T + + F +E+ +L K
Sbjct: 4 EIPDG--QITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60
Query: 61 V-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAK 119
H N++ +GY+ L +V ++ + +L HLH K + IA A+
Sbjct: 61 TRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHIIETK----FEMIKLIDIARQTAQ 115
Query: 120 GLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAA-SRIVGTF 178
G++Y+H + +HRD+K++NI L + KI DFGL E S + ++ G+
Sbjct: 116 GMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLAT--EKSRWSGSHQFEQLSGSI 170
Query: 179 GYLAPEYVR---DGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYM 235
++APE +R + +SDVYAFG+VL EL+TGQ S N R + +M
Sbjct: 171 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN---------RDQIIFM 221
Query: 236 LAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRP 284
+ L P+L++ + M L +C+ + RP
Sbjct: 222 VG------------RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERP 258
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 106/195 (54%), Gaps = 13/195 (6%)
Query: 19 KIGQGSYGSVYLGKLRG-KNAAIKQMK--NTKSKEFSSELKILCKV-HSNLIELIGYAAG 74
++G G +G V++G G A+K +K + F +E ++ ++ H L+ L
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
+ ++++ EY +NG+L D L PS G K L + +A A+G+ +I + Y+H
Sbjct: 86 -EPIYIITEYMENGSLVDFLKTPS--GIK-LTINKLLDMAAQIAEGMAFIEERN---YIH 138
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RD++ +NIL+ KIADFGL +L+E + A ++ + APE + G T K
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF--PIKWTAPEAINYGTFTIK 196
Query: 195 SDVYAFGVVLMELIT 209
SDV++FG++L E++T
Sbjct: 197 SDVWSFGILLTEIVT 211
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 131/276 (47%), Gaps = 42/276 (15%)
Query: 19 KIGQGSYGSVYLGKLRGKNAAIKQMKNTKS-----KEFSSELKILCKV-HSNLIELIGYA 72
+IG GS+G+VY GK G + A+K + T + F +E+ +L K H N++ +GY+
Sbjct: 31 RIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
L +V ++ + +L HLH K + IA A+G++Y+H +
Sbjct: 90 TA-PQLAIVTQWCEGSSLYHHLHASETK----FEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAA-SRIVGTFGYLAPEYVR---D 188
+HRD+K++NI L + KI DFGL E S + ++ G+ ++APE +R
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLAT--EKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199
Query: 189 GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDFMAK 248
+ +SDVYAFG+VL EL+TGQ S N R + M+
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQLPYSNINN---------RDQIIEMVG----------- 239
Query: 249 LTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRP 284
L P+L++ + +M L +C+ + RP
Sbjct: 240 -RGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERP 274
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 107/199 (53%), Gaps = 17/199 (8%)
Query: 17 SLKIGQGSYGSVYLGKLRGKN-AAIKQMK-NTKSKE-FSSELKILCKV-HSNLIELIGYA 72
+K+GQG +G V++G G AIK +K T S E F E +++ K+ H L++L
Sbjct: 23 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGK--KPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ + +++V EY G+L D L KG+ K L V +A A G+ Y+ +
Sbjct: 83 SE-EPIYIVTEYMSKGSLLDFL-----KGEMGKYLRLPQLVDMAAQIASGMAYVERMN-- 134
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
YVHRD+ +NIL+ N K+ADFGL +L+E + A ++ + APE G
Sbjct: 135 -YVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGR 191
Query: 191 VTTKSDVYAFGVVLMELIT 209
T KSDV++FG++L EL T
Sbjct: 192 FTIKSDVWSFGILLTELTT 210
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 110/211 (52%), Gaps = 28/211 (13%)
Query: 20 IGQGSYGSVYLGKLRGK----NAAIKQMKNTKSKE----FSSELKILCKV--HSNLIELI 69
IG+G++G V +++ +AAIK+MK SK+ F+ EL++LCK+ H N+I L+
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 92
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKP-----------LAWTTRVQIALDAA 118
G L+L EYA +G L D L V P L+ + A D A
Sbjct: 93 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 152
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTF 178
+G++Y+ Q ++HRD+ NIL+ N+ AKIADFGL + E+ +
Sbjct: 153 RGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVKKTMGRLPV 205
Query: 179 GYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++A E + TT SDV+++GV+L E+++
Sbjct: 206 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 106/195 (54%), Gaps = 13/195 (6%)
Query: 19 KIGQGSYGSVYLGKLRG-KNAAIKQMK--NTKSKEFSSELKILCKV-HSNLIELIGYAAG 74
++G G +G V++G G A+K +K + F +E ++ ++ H L+ L
Sbjct: 21 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
+ ++++ EY +NG+L D L PS G K L + +A A+G+ +I + Y+H
Sbjct: 81 -EPIYIITEYMENGSLVDFLKTPS--GIK-LTINKLLDMAAQIAEGMAFIEERN---YIH 133
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RD++ +NIL+ KIADFGL +L+E + A ++ + APE + G T K
Sbjct: 134 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF--PIKWTAPEAINYGTFTIK 191
Query: 195 SDVYAFGVVLMELIT 209
SDV++FG++L E++T
Sbjct: 192 SDVWSFGILLTEIVT 206
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 131/275 (47%), Gaps = 40/275 (14%)
Query: 19 KIGQGSYGSVYLGKLRGKNAAIKQMKNTKS-----KEFSSELKILCKV-HSNLIELIGYA 72
+IG GS+G+VY GK G + A+K + T + F +E+ +L K H N++ +GY+
Sbjct: 19 RIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
L +V ++ + +L HLH K + IA A+G++Y+H +
Sbjct: 78 TK-PQLAIVTQWCEGSSLYHHLHASETK----FEMKKLIDIARQTARGMDYLHAKS---I 129
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVR---DG 189
+HRD+K++NI L + KI DFGL + + + ++ G+ ++APE +R
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATV-KSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 188
Query: 190 CVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDFMAKL 249
+ +SDVYAFG+VL EL+TGQ S N R + M+
Sbjct: 189 PYSFQSDVYAFGIVLYELMTGQLPYSNINN---------RDQIIEMVG------------ 227
Query: 250 TECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRP 284
L P+L++ + +M L +C+ + RP
Sbjct: 228 RGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERP 262
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 106/195 (54%), Gaps = 13/195 (6%)
Query: 19 KIGQGSYGSVYLGKLRG-KNAAIKQMK--NTKSKEFSSELKILCKV-HSNLIELIGYAAG 74
++G G +G V++G G A+K +K + F +E ++ ++ H L+ L
Sbjct: 22 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
+ ++++ EY +NG+L D L PS G K L + +A A+G+ +I + Y+H
Sbjct: 82 -EPIYIITEYMENGSLVDFLKTPS--GIK-LTINKLLDMAAQIAEGMAFIEERN---YIH 134
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RD++ +NIL+ KIADFGL +L+E + A ++ + APE + G T K
Sbjct: 135 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF--PIKWTAPEAINYGTFTIK 192
Query: 195 SDVYAFGVVLMELIT 209
SDV++FG++L E++T
Sbjct: 193 SDVWSFGILLTEIVT 207
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 106/195 (54%), Gaps = 13/195 (6%)
Query: 19 KIGQGSYGSVYLGKLRG-KNAAIKQMK--NTKSKEFSSELKILCKV-HSNLIELIGYAAG 74
++G G +G V++G G A+K +K + F +E ++ ++ H L+ L
Sbjct: 29 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 88
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
+ ++++ EY +NG+L D L PS G K L + +A A+G+ +I + Y+H
Sbjct: 89 -EPIYIITEYMENGSLVDFLKTPS--GIK-LTINKLLDMAAQIAEGMAFIEERN---YIH 141
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RD++ +NIL+ KIADFGL +L+E + A ++ + APE + G T K
Sbjct: 142 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF--PIKWTAPEAINYGTFTIK 199
Query: 195 SDVYAFGVVLMELIT 209
SDV++FG++L E++T
Sbjct: 200 SDVWSFGILLTEIVT 214
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 106/195 (54%), Gaps = 13/195 (6%)
Query: 19 KIGQGSYGSVYLGKLRG-KNAAIKQMK--NTKSKEFSSELKILCKV-HSNLIELIGYAAG 74
++G G +G V++G G A+K +K + F +E ++ ++ H L+ L
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
+ ++++ EY +NG+L D L PS G K L + +A A+G+ +I + Y+H
Sbjct: 80 -EPIYIITEYMENGSLVDFLKTPS--GIK-LTINKLLDMAAQIAEGMAFIEERN---YIH 132
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RD++ +NIL+ KIADFGL +L+E + A ++ + APE + G T K
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF--PIKWTAPEAINYGTFTIK 190
Query: 195 SDVYAFGVVLMELIT 209
SDV++FG++L E++T
Sbjct: 191 SDVWSFGILLTEIVT 205
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 106/205 (51%), Gaps = 23/205 (11%)
Query: 19 KIGQGSYGSVYL------GKLRGKNAAIKQMKNT---KSKEFSSELKILCKVHSNLI--- 66
++G+G++GSV L G G A+KQ++++ + ++F E++IL +HS+ I
Sbjct: 14 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 73
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAAKGLEYI 124
+ Y G L LV EY +G L D L H + + L +++++ KG+EY+
Sbjct: 74 RGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGMEYL 127
Query: 125 HQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
VHRD+ NIL++S KIADFGL KLL + + APE
Sbjct: 128 GSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPE 184
Query: 185 YVRDGCVTTKSDVYAFGVVLMELIT 209
+ D + +SDV++FGVVL EL T
Sbjct: 185 SLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 106/195 (54%), Gaps = 13/195 (6%)
Query: 19 KIGQGSYGSVYLGKLRG-KNAAIKQMK--NTKSKEFSSELKILCKV-HSNLIELIGYAAG 74
++G G +G V++G G A+K +K + F +E ++ ++ H L+ L
Sbjct: 28 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 87
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
+ ++++ EY +NG+L D L PS G K L + +A A+G+ +I + Y+H
Sbjct: 88 -EPIYIITEYMENGSLVDFLKTPS--GIK-LTINKLLDMAAQIAEGMAFIEERN---YIH 140
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RD++ +NIL+ KIADFGL +L+E + A ++ + APE + G T K
Sbjct: 141 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF--PIKWTAPEAINYGTFTIK 198
Query: 195 SDVYAFGVVLMELIT 209
SDV++FG++L E++T
Sbjct: 199 SDVWSFGILLTEIVT 213
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 111/209 (53%), Gaps = 17/209 (8%)
Query: 19 KIGQGSYGSVYLGKLRGKN-AAIKQMK-NTKSKE-FSSELKILCKV-HSNLIELIGYAAG 74
++G G +G V++G G AIK +K T S E F E +I+ K+ H L++L +
Sbjct: 16 RLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
+ +++V EY G+L D L +G+ L V +A A G+ YI + Y+H
Sbjct: 76 -EPIYIVTEYMNKGSLLDFLK--DGEGRA-LKLPNLVDMAAQVAAGMAYIERMN---YIH 128
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RD++++NIL+ + KIADFGL +L+E + A ++ + APE G T K
Sbjct: 129 RDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKF--PIKWTAPEAALYGRFTIK 186
Query: 195 SDVYAFGVVLMELITGQQALSRDANPGNN 223
SDV++FG++L EL+T R PG N
Sbjct: 187 SDVWSFGILLTELVTK----GRVPYPGMN 211
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 106/195 (54%), Gaps = 13/195 (6%)
Query: 19 KIGQGSYGSVYLGKLRG-KNAAIKQMK--NTKSKEFSSELKILCKV-HSNLIELIGYAAG 74
++G G +G V++G G A+K +K + F +E ++ ++ H L+ L
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
+ ++++ EY +NG+L D L PS G K L + +A A+G+ +I + Y+H
Sbjct: 80 -EPIYIITEYMENGSLVDFLKTPS--GIK-LTINKLLDMAAQIAEGMAFIEERN---YIH 132
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RD++ +NIL+ KIADFGL +L+E + A ++ + APE + G T K
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF--PIKWTAPEAINYGTFTIK 190
Query: 195 SDVYAFGVVLMELIT 209
SDV++FG++L E++T
Sbjct: 191 SDVWSFGILLTEIVT 205
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 131/276 (47%), Gaps = 42/276 (15%)
Query: 19 KIGQGSYGSVYLGKLRGKNAAIKQMKNTKS-----KEFSSELKILCKV-HSNLIELIGYA 72
+IG GS+G+VY GK G + A+K + T + F +E+ +L K H N++ +GY+
Sbjct: 31 RIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
L +V ++ + +L HLH K + IA A+G++Y+H +
Sbjct: 90 TK-PQLAIVTQWCEGSSLYHHLHASETK----FEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAA-SRIVGTFGYLAPEYVR---D 188
+HRD+K++NI L + KI DFGL E S + ++ G+ ++APE +R
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLAT--EKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199
Query: 189 GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDFMAK 248
+ +SDVYAFG+VL EL+TGQ S N R + M+
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQLPYSNINN---------RDQIIEMVG----------- 239
Query: 249 LTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRP 284
L P+L++ + +M L +C+ + RP
Sbjct: 240 -RGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERP 274
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 106/195 (54%), Gaps = 13/195 (6%)
Query: 19 KIGQGSYGSVYLGKLRG-KNAAIKQMK--NTKSKEFSSELKILCKV-HSNLIELIGYAAG 74
++G G +G V++G G A+K +K + F +E ++ ++ H L+ L
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
+ ++++ EY +NG+L D L PS G K L + +A A+G+ +I + Y+H
Sbjct: 86 -EPIYIITEYMENGSLVDFLKTPS--GIK-LTINKLLDMAAQIAEGMAFIEERN---YIH 138
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RD++ +NIL+ KIADFGL +L+E + A ++ + APE + G T K
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF--PIKWTAPEAINYGTFTIK 196
Query: 195 SDVYAFGVVLMELIT 209
SDV++FG++L E++T
Sbjct: 197 SDVWSFGILLTEIVT 211
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 106/195 (54%), Gaps = 13/195 (6%)
Query: 19 KIGQGSYGSVYLGKLRG-KNAAIKQMK--NTKSKEFSSELKILCKV-HSNLIELIGYAAG 74
++G G +G V++G G A+K +K + F +E ++ ++ H L+ L
Sbjct: 25 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 84
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
+ ++++ EY +NG+L D L PS G K L + +A A+G+ +I + Y+H
Sbjct: 85 -EPIYIITEYMENGSLVDFLKTPS--GIK-LTINKLLDMAAQIAEGMAFIEERN---YIH 137
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RD++ +NIL+ KIADFGL +L+E + A ++ + APE + G T K
Sbjct: 138 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF--PIKWTAPEAINYGTFTIK 195
Query: 195 SDVYAFGVVLMELIT 209
SDV++FG++L E++T
Sbjct: 196 SDVWSFGILLTEIVT 210
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 106/195 (54%), Gaps = 13/195 (6%)
Query: 19 KIGQGSYGSVYLGKLRG-KNAAIKQMK--NTKSKEFSSELKILCKV-HSNLIELIGYAAG 74
++G G +G V++G G A+K +K + F +E ++ ++ H L+ L
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
+ ++++ EY +NG+L D L PS G K L + +A A+G+ +I + Y+H
Sbjct: 80 -EPIYIITEYMENGSLVDFLKTPS--GIK-LTINKLLDMAAQIAEGMAFIEERN---YIH 132
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RD++ +NIL+ KIADFGL +L+E + A ++ + APE + G T K
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF--PIKWTAPEAINYGTFTIK 190
Query: 195 SDVYAFGVVLMELIT 209
SDV++FG++L E++T
Sbjct: 191 SDVWSFGILLTEIVT 205
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 106/195 (54%), Gaps = 13/195 (6%)
Query: 19 KIGQGSYGSVYLGKLRG-KNAAIKQMK--NTKSKEFSSELKILCKV-HSNLIELIGYAAG 74
++G G +G V++G G A+K +K + F +E ++ ++ H L+ L
Sbjct: 15 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
+ ++++ EY +NG+L D L PS G K L + +A A+G+ +I + Y+H
Sbjct: 75 -EPIYIITEYMENGSLVDFLKTPS--GIK-LTINKLLDMAAQIAEGMAFIEERN---YIH 127
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RD++ +NIL+ KIADFGL +L+E + A ++ + APE + G T K
Sbjct: 128 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF--PIKWTAPEAINYGTFTIK 185
Query: 195 SDVYAFGVVLMELIT 209
SDV++FG++L E++T
Sbjct: 186 SDVWSFGILLTEIVT 200
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 106/195 (54%), Gaps = 13/195 (6%)
Query: 19 KIGQGSYGSVYLGKLRG-KNAAIKQMK--NTKSKEFSSELKILCKV-HSNLIELIGYAAG 74
++G G +G V++G G A+K +K + F +E ++ ++ H L+ L
Sbjct: 30 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 89
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
+ ++++ EY +NG+L D L PS G K L + +A A+G+ +I + Y+H
Sbjct: 90 -EPIYIITEYMENGSLVDFLKTPS--GIK-LTINKLLDMAAQIAEGMAFIEERN---YIH 142
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RD++ +NIL+ KIADFGL +L+E + A ++ + APE + G T K
Sbjct: 143 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF--PIKWTAPEAINYGTFTIK 200
Query: 195 SDVYAFGVVLMELIT 209
SDV++FG++L E++T
Sbjct: 201 SDVWSFGILLTEIVT 215
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 110/211 (52%), Gaps = 28/211 (13%)
Query: 20 IGQGSYGSVYLGKLRGK----NAAIKQMKNTKSKE----FSSELKILCKV--HSNLIELI 69
IG+G++G V +++ +AAIK+MK SK+ F+ EL++LCK+ H N+I L+
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 89
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKP-----------LAWTTRVQIALDAA 118
G L+L EYA +G L D L V P L+ + A D A
Sbjct: 90 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 149
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTF 178
+G++Y+ Q ++HR++ NIL+ N+ AKIADFGL + E+ +
Sbjct: 150 RGMDYLSQKQ---FIHRNLAARNILVGENYVAKIADFGLSR----GQEVYVKKTMGRLPV 202
Query: 179 GYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++A E + TT SDV+++GV+L E+++
Sbjct: 203 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 105/195 (53%), Gaps = 13/195 (6%)
Query: 19 KIGQGSYGSVYLGKLRG-KNAAIKQMK--NTKSKEFSSELKILCKV-HSNLIELIGYAAG 74
++G G G V++G G A+K +K + F +E ++ ++ H L+ L
Sbjct: 20 RLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
+ ++++ EY +NG+L D L PS G K L + +A A+G+ +I + Y+H
Sbjct: 80 -EPIYIITEYMENGSLVDFLKTPS--GIK-LTINKLLDMAAQIAEGMAFIEERN---YIH 132
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RD++ +NIL+ KIADFGL +L+E + A ++ + APE + G T K
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKF--PIKWTAPEAINYGTFTIK 190
Query: 195 SDVYAFGVVLMELIT 209
SDV++FG++L E++T
Sbjct: 191 SDVWSFGILLTEIVT 205
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 106/195 (54%), Gaps = 13/195 (6%)
Query: 19 KIGQGSYGSVYLGKLRG-KNAAIKQMK--NTKSKEFSSELKILCKV-HSNLIELIGYAAG 74
++G G +G V++G G A+K +K + F +E ++ ++ H L+ L
Sbjct: 16 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
+ ++++ EY +NG+L D L PS G K L + +A A+G+ +I + Y+H
Sbjct: 76 -EPIYIITEYMENGSLVDFLKTPS--GIK-LTINKLLDMAAQIAEGMAFIEERN---YIH 128
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
R+++ +NIL+ KIADFGL +L+E + A ++ + APE + G T K
Sbjct: 129 RNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF--PIKWTAPEAINYGTFTIK 186
Query: 195 SDVYAFGVVLMELIT 209
SDV++FG++L E++T
Sbjct: 187 SDVWSFGILLTEIVT 201
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 137/313 (43%), Gaps = 54/313 (17%)
Query: 19 KIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV---HSNLIELIGYAAGG 75
+IG+G YG V++GK RG+ A+K T+ + E +I V H N++ I G
Sbjct: 44 QIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKG 103
Query: 76 ----DSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT--- 128
L+L+ +Y +NG+L D+L ++ K + +++A + GL ++H
Sbjct: 104 TGSWTQLYLITDYHENGSLYDYLKSTTLDAK------SMLKLAYSSVSGLCHLHTEIFST 157
Query: 129 --KPYYVHRDVKTSNILLDSNFRAKIADFGL-VKLLEHSPEIAAAASRIVGTFGYLAPEY 185
KP HRD+K+ NIL+ N IAD GL VK + + E+ + VGT Y+ PE
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEV 217
Query: 186 VRDGCVTTK------SDVYAFGVVLME---------LITGQQALSRDANPGNNQYTEHRS 230
+ + +D+Y+FG++L E ++ Q D P + Y + R
Sbjct: 218 LDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMRE 277
Query: 231 LVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSML-QMALLSKDCVDENWKRRPDMSNA 289
+V + KL PN R+ D L QM L +C W P
Sbjct: 278 IV------------CIKKLRPSF-PN--RWSSDECLRQMGKLMTEC----WAHNPASRLT 318
Query: 290 AIRLSHILISSKE 302
A+R+ L E
Sbjct: 319 ALRVKKTLAKMSE 331
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 102/195 (52%), Gaps = 12/195 (6%)
Query: 19 KIGQGSYGSVYLGKLRGKN-AAIKQMK--NTKSKEFSSELKILCKV-HSNLIELIGYAAG 74
++G G +G V++G A+K +K + F E ++ + H L+ L
Sbjct: 20 RLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
+ ++++ EY G+L D L S +G K L + + A+G+ YI + Y+H
Sbjct: 80 EEPIYIITEYMAKGSLLDFLK--SDEGGKVLL-PKLIDFSAQIAEGMAYIERKN---YIH 133
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RD++ +N+L+ + KIADFGL +++E + A ++ + APE + GC T K
Sbjct: 134 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKF--PIKWTAPEAINFGCFTIK 191
Query: 195 SDVYAFGVVLMELIT 209
SDV++FG++L E++T
Sbjct: 192 SDVWSFGILLYEIVT 206
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 105/208 (50%), Gaps = 27/208 (12%)
Query: 20 IGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSS-------ELKILCKV-HSNLIELIGY 71
IG G +G VY G A+K ++ ++ S E K+ + H N+I L G
Sbjct: 15 IGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGV 74
Query: 72 AAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPY 131
+L LV E+A+ G L+ L GK+ + V A+ A+G+ Y+H
Sbjct: 75 CLKEPNLCLVMEFARGGPLNRVL-----SGKR-IPPDILVNWAVQIARGMNYLHDEAIVP 128
Query: 132 YVHRDVKTSNILLD--------SNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
+HRD+K+SNIL+ SN KI DFGL + + +++AA G + ++AP
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAA-----GAYAWMAP 183
Query: 184 EYVRDGCVTTKSDVYAFGVVLMELITGQ 211
E +R + SDV+++GV+L EL+TG+
Sbjct: 184 EVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 113/208 (54%), Gaps = 16/208 (7%)
Query: 19 KIGQGSYGSVYLGKL-RGKNAAIKQMK--NTKSKEFSSELKILCKV-HSNLIELIGYAAG 74
K+G G +G V++ + A+K MK + + F +E ++ + H L++L
Sbjct: 22 KLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 81
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKGLEYIHQYTKPYYV 133
+ ++++ E+ G+L D L S +G K+PL + + A+G+ +I Q Y+
Sbjct: 82 -EPIYIITEFMAKGSLLDFLK--SDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN---YI 133
Query: 134 HRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTT 193
HRD++ +NIL+ ++ KIADFGL +++E + A ++ + APE + G T
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF--PIKWTAPEAINFGSFTI 191
Query: 194 KSDVYAFGVVLMELIT-GQQALSRDANP 220
KSDV++FG++LME++T G+ +NP
Sbjct: 192 KSDVWSFGILLMEIVTYGRIPYPGMSNP 219
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 107/214 (50%), Gaps = 24/214 (11%)
Query: 9 DATSNFSTSLKIGQGSYGSVYLGKLRGKN-----AAIKQMK----NTKSKEFSSELKILC 59
DAT N S +G G +G V G+L+ + AIK +K + ++F E I+
Sbjct: 43 DAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 60 KV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIA---L 115
+ H N+I L G + +V EY +NG+L L +K A T +Q+
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-------RKHDAQFTVIQLVGMLR 154
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
A G++Y+ YVHRD+ NIL++SN K++DFGL ++LE PE A
Sbjct: 155 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGK 211
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ +PE + T+ SDV+++G+VL E+++
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 102/195 (52%), Gaps = 12/195 (6%)
Query: 19 KIGQGSYGSVYLGKLRGKN-AAIKQMK--NTKSKEFSSELKILCKV-HSNLIELIGYAAG 74
K+G G +G V++G A+K +K + F E ++ + H L+ L
Sbjct: 19 KLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
+ ++++ E+ G+L D L S +G K L + + A+G+ YI + Y+H
Sbjct: 79 EEPIYIITEFMAKGSLLDFLK--SDEGGKVLL-PKLIDFSAQIAEGMAYIERKN---YIH 132
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RD++ +N+L+ + KIADFGL +++E + A ++ + APE + GC T K
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKF--PIKWTAPEAINFGCFTIK 190
Query: 195 SDVYAFGVVLMELIT 209
S+V++FG++L E++T
Sbjct: 191 SNVWSFGILLYEIVT 205
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 107/214 (50%), Gaps = 24/214 (11%)
Query: 9 DATSNFSTSLKIGQGSYGSVYLGKLRGKN-----AAIKQMK----NTKSKEFSSELKILC 59
DAT N S +G G +G V G+L+ + AIK +K + ++F E I+
Sbjct: 14 DAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 72
Query: 60 KV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIA---L 115
+ H N+I L G + +V EY +NG+L L +K A T +Q+
Sbjct: 73 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-------RKHDAQFTVIQLVGMLR 125
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
A G++Y+ YVHRD+ NIL++SN K++DFGL ++LE PE A
Sbjct: 126 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 182
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ +PE + T+ SDV+++G+VL E+++
Sbjct: 183 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 20 IGQGSYGSVYLGKLR---GKN---AAIKQMK----NTKSKEFSSELKILCKV-HSNLIEL 68
IG G +G VY G L+ GK AIK +K + +F E I+ + H N+I L
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT 128
G + + ++ EY +NGAL L + + V + A G++Y+
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLR----EKDGEFSVLQLVGMLRGIAAGMKYLANMN 167
Query: 129 KPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRD 188
YVHRD+ NIL++SN K++DFGL ++LE PE S + APE +
Sbjct: 168 ---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISY 224
Query: 189 GCVTTKSDVYAFGVVLMELIT 209
T+ SDV++FG+V+ E++T
Sbjct: 225 RKFTSASDVWSFGIVMWEVMT 245
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 107/214 (50%), Gaps = 24/214 (11%)
Query: 9 DATSNFSTSLKIGQGSYGSVYLGKLRGKN-----AAIKQMK----NTKSKEFSSELKILC 59
DAT N S +G G +G V G+L+ + AIK +K + ++F E I+
Sbjct: 43 DAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 60 KV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIA---L 115
+ H N+I L G + +V EY +NG+L L +K A T +Q+
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-------RKHDAQFTVIQLVGMLR 154
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
A G++Y+ YVHRD+ NIL++SN K++DFGL ++LE PE A
Sbjct: 155 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ +PE + T+ SDV+++G+VL E+++
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 107/214 (50%), Gaps = 24/214 (11%)
Query: 9 DATSNFSTSLKIGQGSYGSVYLGKLRGKN-----AAIKQMK----NTKSKEFSSELKILC 59
DAT N S +G G +G V G+L+ + AIK +K + ++F E I+
Sbjct: 41 DAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 99
Query: 60 KV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIA---L 115
+ H N+I L G + +V EY +NG+L L +K A T +Q+
Sbjct: 100 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-------RKHDAQFTVIQLVGMLR 152
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
A G++Y+ YVHRD+ NIL++SN K++DFGL ++LE PE A
Sbjct: 153 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 209
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ +PE + T+ SDV+++G+VL E+++
Sbjct: 210 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 107/214 (50%), Gaps = 24/214 (11%)
Query: 9 DATSNFSTSLKIGQGSYGSVYLGKLRGKN-----AAIKQMK----NTKSKEFSSELKILC 59
DAT N S +G G +G V G+L+ + AIK +K + ++F E I+
Sbjct: 43 DAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 60 KV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIA---L 115
+ H N+I L G + +V EY +NG+L L +K A T +Q+
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-------RKHDAQFTVIQLVGMLR 154
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
A G++Y+ YVHRD+ NIL++SN K++DFGL ++LE PE A
Sbjct: 155 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ +PE + T+ SDV+++G+VL E+++
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 107/214 (50%), Gaps = 24/214 (11%)
Query: 9 DATSNFSTSLKIGQGSYGSVYLGKLRGKN-----AAIKQMK----NTKSKEFSSELKILC 59
DAT N S +G G +G V G+L+ + AIK +K + ++F E I+
Sbjct: 43 DAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 60 KV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIA---L 115
+ H N+I L G + +V EY +NG+L L +K A T +Q+
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-------RKHDAQFTVIQLVGMLR 154
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
A G++Y+ YVHRD+ NIL++SN K++DFGL ++LE PE A
Sbjct: 155 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ +PE + T+ SDV+++G+VL E+++
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 107/214 (50%), Gaps = 24/214 (11%)
Query: 9 DATSNFSTSLKIGQGSYGSVYLGKLRGKN-----AAIKQMK----NTKSKEFSSELKILC 59
DAT N S +G G +G V G+L+ + AIK +K + ++F E I+
Sbjct: 31 DAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 89
Query: 60 KV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIA---L 115
+ H N+I L G + +V EY +NG+L L +K A T +Q+
Sbjct: 90 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-------RKHDAQFTVIQLVGMLR 142
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
A G++Y+ YVHRD+ NIL++SN K++DFGL ++LE PE A
Sbjct: 143 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 199
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ +PE + T+ SDV+++G+VL E+++
Sbjct: 200 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 107/214 (50%), Gaps = 24/214 (11%)
Query: 9 DATSNFSTSLKIGQGSYGSVYLGKLRGKN-----AAIKQMK----NTKSKEFSSELKILC 59
DAT N S +G G +G V G+L+ + AIK +K + ++F E I+
Sbjct: 43 DAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 60 KV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIA---L 115
+ H N+I L G + +V EY +NG+L L +K A T +Q+
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-------RKHDAQFTVIQLVGMLR 154
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
A G++Y+ YVHRD+ NIL++SN K++DFGL ++LE PE A
Sbjct: 155 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ +PE + T+ SDV+++G+VL E+++
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 113/208 (54%), Gaps = 16/208 (7%)
Query: 19 KIGQGSYGSVYLGKL-RGKNAAIKQMK--NTKSKEFSSELKILCKV-HSNLIELIGYAAG 74
K+G G +G V++ + A+K MK + + F +E ++ + H L++L
Sbjct: 195 KLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 254
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKGLEYIHQYTKPYYV 133
+ ++++ E+ G+L D L S +G K+PL + + A+G+ +I Q Y+
Sbjct: 255 -EPIYIITEFMAKGSLLDFLK--SDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN---YI 306
Query: 134 HRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTT 193
HRD++ +NIL+ ++ KIADFGL +++E + A ++ + APE + G T
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF--PIKWTAPEAINFGSFTI 364
Query: 194 KSDVYAFGVVLMELIT-GQQALSRDANP 220
KSDV++FG++LME++T G+ +NP
Sbjct: 365 KSDVWSFGILLMEIVTYGRIPYPGMSNP 392
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 107/214 (50%), Gaps = 24/214 (11%)
Query: 9 DATSNFSTSLKIGQGSYGSVYLGKLRGKN-----AAIKQMK----NTKSKEFSSELKILC 59
DAT N S +G G +G V G+L+ + AIK +K + ++F E I+
Sbjct: 43 DAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 60 KV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIA---L 115
+ H N+I L G + +V EY +NG+L L +K A T +Q+
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-------RKHDAQFTVIQLVGMLR 154
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
A G++Y+ YVHRD+ NIL++SN K++DFGL ++LE PE A
Sbjct: 155 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGK 211
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ +PE + T+ SDV+++G+VL E+++
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 107/214 (50%), Gaps = 24/214 (11%)
Query: 9 DATSNFSTSLKIGQGSYGSVYLGKLRGKN-----AAIKQMK----NTKSKEFSSELKILC 59
DAT N S +G G +G V G+L+ + AIK +K + ++F E I+
Sbjct: 43 DAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 60 KV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIA---L 115
+ H N+I L G + +V EY +NG+L L +K A T +Q+
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL-------RKHDAQFTVIQLVGMLR 154
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
A G++Y+ +VHRD+ NIL++SN K++DFGL ++LE PE A
Sbjct: 155 GIASGMKYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ +PE + T+ SDV+++G+VL E+++
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 97/199 (48%), Gaps = 17/199 (8%)
Query: 20 IGQGSYGSVYLGKLRGKN-----AAIKQMK----NTKSKEFSSELKILCKV-HSNLIELI 69
IG G G V G+LR AIK +K + ++F SE I+ + H N+I L
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTK 129
G G +V EY +NG+L L + G+ V + G+ Y+
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLR--THDGQ--FTIMQLVGMLRGVGAGMRYLSDLG- 171
Query: 130 PYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG 189
YVHRD+ N+L+DSN K++DFGL ++LE P+ A + + APE +
Sbjct: 172 --YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFR 229
Query: 190 CVTTKSDVYAFGVVLMELI 208
++ SDV++FGVV+ E++
Sbjct: 230 TFSSASDVWSFGVVMWEVL 248
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 17/200 (8%)
Query: 20 IGQGSYGSVYLGKLR--GKN---AAIKQMK----NTKSKEFSSELKILCKV-HSNLIELI 69
IG G +G V G+L+ GK AIK +K + ++F E I+ + H N+I L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTK 129
G + +V EY +NG+L L K V + + G++Y+
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLDTFLK----KNDGQFTVIQLVGMLRGISAGMKYLSDMG- 144
Query: 130 PYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG 189
YVHRD+ NIL++SN K++DFGL ++LE PE A + APE +
Sbjct: 145 --YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFR 202
Query: 190 CVTTKSDVYAFGVVLMELIT 209
T+ SDV+++G+V+ E+++
Sbjct: 203 KFTSASDVWSYGIVMWEVVS 222
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 101/200 (50%), Gaps = 17/200 (8%)
Query: 20 IGQGSYGSVYLGKLR--GKN---AAIKQMK----NTKSKEFSSELKILCKV-HSNLIELI 69
IG G +G V G+L+ GK AIK +K + + ++F SE I+ + H N+I L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTK 129
G + ++ EY +NG+L L K V + G++Y+ +
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFLR----KNDGRFTVIQLVGMLRGIGSGMKYLSDMS- 136
Query: 130 PYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG 189
YVHRD+ NIL++SN K++DFG+ ++LE PE A + APE +
Sbjct: 137 --YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR 194
Query: 190 CVTTKSDVYAFGVVLMELIT 209
T+ SDV+++G+V+ E+++
Sbjct: 195 KFTSASDVWSYGIVMWEVMS 214
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 107/202 (52%), Gaps = 14/202 (6%)
Query: 14 FSTSLKIGQGSYGSVY--LGKLRGKNAAIKQMK-NTKSKEFSSELKILCKVHS-NLIELI 69
F K+G+GSYGSVY + K G+ AIKQ+ + +E E+ I+ + S ++++
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYY 90
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTK 129
G L++V EY G++SD + + K L I KGLEY+H K
Sbjct: 91 GSYFKNTDLWIVMEYCGAGSVSDIIRLRN----KTLTEDEIATILQSTLKGLEYLHFMRK 146
Query: 130 PYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG 189
+HRD+K NILL++ AK+ADFG+ L + A + ++GT ++APE +++
Sbjct: 147 ---IHRDIKAGNILLNTEGHAKLADFGVAGQLT---DXMAKRNXVIGTPFWMAPEVIQEI 200
Query: 190 CVTTKSDVYAFGVVLMELITGQ 211
+D+++ G+ +E+ G+
Sbjct: 201 GYNCVADIWSLGITAIEMAEGK 222
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 101/200 (50%), Gaps = 17/200 (8%)
Query: 20 IGQGSYGSVYLGKLR--GKN---AAIKQMK----NTKSKEFSSELKILCKV-HSNLIELI 69
IG G +G V G+L+ GK AIK +K + + ++F SE I+ + H N+I L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTK 129
G + ++ EY +NG+L L K V + G++Y+ +
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFLR----KNDGRFTVIQLVGMLRGIGSGMKYLSDMS- 130
Query: 130 PYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG 189
YVHRD+ NIL++SN K++DFG+ ++LE PE A + APE +
Sbjct: 131 --YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR 188
Query: 190 CVTTKSDVYAFGVVLMELIT 209
T+ SDV+++G+V+ E+++
Sbjct: 189 KFTSASDVWSYGIVMWEVMS 208
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 106/225 (47%), Gaps = 26/225 (11%)
Query: 3 SYNEVRDATSNFSTSLK---------IGQGSYGSVYLGKLRGKN-----AAIKQMK---- 44
+Y E A +F+ ++ IG G G V G+LR AIK +K
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 45 NTKSKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKK 103
+ ++F SE I+ + H N+I L G G +V EY +NG+L L + G+
Sbjct: 91 ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR--THDGQ- 147
Query: 104 PLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEH 163
V + G+ Y+ YVHRD+ N+L+DSN K++DFGL ++LE
Sbjct: 148 -FTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLED 203
Query: 164 SPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELI 208
P+ A + + APE + ++ SDV++FGVV+ E++
Sbjct: 204 DPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 17/200 (8%)
Query: 20 IGQGSYGSVYLGKLR--GKN---AAIKQMK----NTKSKEFSSELKILCKV-HSNLIELI 69
IG G +G V G+L+ GK AIK +K + ++F E I+ + H N++ L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTK 129
G G + +V E+ +NGAL L K V + A G+ Y+
Sbjct: 111 GVVTRGKPVMIVIEFMENGALDAFLR----KHDGQFTVIQLVGMLRGIAAGMRYLADMG- 165
Query: 130 PYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG 189
YVHRD+ NIL++SN K++DFGL +++E PE + + APE ++
Sbjct: 166 --YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYR 223
Query: 190 CVTTKSDVYAFGVVLMELIT 209
T+ SDV+++G+V+ E+++
Sbjct: 224 KFTSASDVWSYGIVMWEVMS 243
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 21/217 (9%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRG-------KNAAIKQMKNTKSK----EFSSELKIL 58
A + S ++GQGS+G VY G +G AIK + S EF +E ++
Sbjct: 8 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 67
Query: 59 CKVHSN-LIELIGYAAGGDSLFLVYEYAQNGALSDHLH--WPSVKGKK---PLAWTTRVQ 112
+ + + ++ L+G + G ++ E G L +L P ++ P + + +Q
Sbjct: 68 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 127
Query: 113 IALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAAS 172
+A + A G+ Y++ +VHRD+ N ++ +F KI DFG+ + + +
Sbjct: 128 MAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGK 184
Query: 173 RIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++ +++PE ++DG TT SDV++FGVVL E+ T
Sbjct: 185 GLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 106/214 (49%), Gaps = 24/214 (11%)
Query: 9 DATSNFSTSLKIGQGSYGSVYLGKLRGKN-----AAIKQMK----NTKSKEFSSELKILC 59
DAT N S +G G +G V G+L+ + AIK +K + ++F E I+
Sbjct: 14 DAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 72
Query: 60 KV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIA---L 115
+ H N+I L G + +V E +NG+L L +K A T +Q+
Sbjct: 73 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL-------RKHDAQFTVIQLVGMLR 125
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
A G++Y+ YVHRD+ NIL++SN K++DFGL ++LE PE A
Sbjct: 126 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 182
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ +PE + T+ SDV+++G+VL E+++
Sbjct: 183 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 13/203 (6%)
Query: 12 SNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK--NTKSKEFSSELKILCKV-HSNLI 66
++ + K+G G YG VY+G K A+K +K + +EF E ++ ++ H NL+
Sbjct: 32 TDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 91
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ 126
+L+G ++V EY G L D+L ++ + + +A + +EY+
Sbjct: 92 QLLGVCTLEPPFYIVTEYMPYGNLLDYLR---ECNREEVTAVVLLYMATQISSAMEYLE- 147
Query: 127 YTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV 186
K ++HRD+ N L+ N K+ADFGL +L+ A A ++ + APE +
Sbjct: 148 --KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESL 203
Query: 187 RDGCVTTKSDVYAFGVVLMELIT 209
+ KSDV+AFGV+L E+ T
Sbjct: 204 AYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 21/217 (9%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRG-------KNAAIKQMKNTKSK----EFSSELKIL 58
A + S ++GQGS+G VY G +G AIK + S EF +E ++
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 59 CKVHSN-LIELIGYAAGGDSLFLVYEYAQNGALSDHLH--WPSVKGKK---PLAWTTRVQ 112
+ + + ++ L+G + G ++ E G L +L P ++ P + + +Q
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 136
Query: 113 IALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAAS 172
+A + A G+ Y++ +VHRD+ N ++ +F KI DFG+ + + +
Sbjct: 137 MAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGK 193
Query: 173 RIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++ +++PE ++DG TT SDV++FGVVL E+ T
Sbjct: 194 GLL-PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 106/214 (49%), Gaps = 24/214 (11%)
Query: 9 DATSNFSTSLKIGQGSYGSVYLGKLRGKN-----AAIKQMK----NTKSKEFSSELKILC 59
DAT N S +G G +G V G+L+ + AIK +K + ++F E I+
Sbjct: 43 DAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 60 KV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIA---L 115
+ H N+I L G + +V E +NG+L L +K A T +Q+
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL-------RKHDAQFTVIQLVGMLR 154
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
A G++Y+ YVHRD+ NIL++SN K++DFGL ++LE PE A
Sbjct: 155 GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ +PE + T+ SDV+++G+VL E+++
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 110/214 (51%), Gaps = 35/214 (16%)
Query: 19 KIGQGSYGSVYLGKLRGKNAAIKQMKN-------------TKSKEFSSELKILCKV-HSN 64
+IG+G +G V+ G+L K+ ++ +K+ K +EF E+ I+ + H N
Sbjct: 26 QIGKGGFGLVHKGRLV-KDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYI 124
+++L G + V E+ G L L + P+ W+ ++++ LD A G+EY+
Sbjct: 85 IVKLYGLMHNPPRM--VMEFVPCGDLYHRL----LDKAHPIKWSVKLRLMLDIALGIEYM 138
Query: 125 HQYTKPYYVHRDVKTSNILLDS-----NFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG 179
Q P VHRD+++ NI L S AK+ADFGL + HS S ++G F
Sbjct: 139 -QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS------VSGLLGNFQ 191
Query: 180 YLAPEYV--RDGCVTTKSDVYAFGVVLMELITGQ 211
++APE + + T K+D Y+F ++L ++TG+
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 112/226 (49%), Gaps = 21/226 (9%)
Query: 1 MFSYNEVRDATSNFSTSLKIGQGSYGSVYLGKLRG-------KNAAIKQMKNTKSK---- 49
+F +E A + S ++GQGS+G VY G +G AIK + S
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 50 EFSSELKILCKVHSN-LIELIGYAAGGDSLFLVYEYAQNGALSDHLH--WPSVKGKK--- 103
EF +E ++ + + + ++ L+G + G ++ E G L +L P ++
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 104 PLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEH 163
P + + +Q+A + A G+ Y++ +VHRD+ N ++ +F KI DFG+ + + +
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI-Y 180
Query: 164 SPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ + + +++PE ++DG TT SDV++FGVVL E+ T
Sbjct: 181 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 113/224 (50%), Gaps = 27/224 (12%)
Query: 19 KIGQGSYGSVYLGKLRGKN-------AAIKQMKN---TKSKEFSSELKILCKV-HSNLIE 67
++G+G++G V+L + + A+K +K+ K+F E ++L + H ++++
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 81
Query: 68 LIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSV---------KGKKPLAWTTRVQIALD 116
G GD L +V+EY ++G L+ L H P + K L + + IA
Sbjct: 82 FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 141
Query: 117 AAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVG 176
A G+ Y+ ++VHRD+ T N L+ +N KI DFG+ + + +S + +
Sbjct: 142 IASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDV-YSTDYYRVGGHTML 197
Query: 177 TFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDAN 219
++ PE + TT+SDV++FGV+L E+ T G+Q + +N
Sbjct: 198 PIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN 241
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 25/207 (12%)
Query: 20 IGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKVHSNLIELIGYAAGGD--- 76
IG+G +G V+ GK RG+ A+K + + + + E +I V ++G+ A +
Sbjct: 12 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 71
Query: 77 ----SLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT---- 128
L+LV +Y ++G+L D+L+ +V + +++AL A GL ++H
Sbjct: 72 GTWTQLWLVSDYHEHGSLFDYLNRYTVTVE------GMIKLALSTASGLAHLHMEIVGTQ 125
Query: 129 -KPYYVHRDVKTSNILLDSNFRAKIADFGL-VKLLEHSPEIAAAASRIVGTFGYLAPEYV 186
KP HRD+K+ NIL+ N IAD GL V+ + I A + VGT Y+APE +
Sbjct: 126 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 185
Query: 187 RDGCVT------TKSDVYAFGVVLMEL 207
D ++D+YA G+V E+
Sbjct: 186 DDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 25/207 (12%)
Query: 20 IGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKVHSNLIELIGYAAGGD--- 76
IG+G +G V+ GK RG+ A+K + + + + E +I V ++G+ A +
Sbjct: 11 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 70
Query: 77 ----SLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT---- 128
L+LV +Y ++G+L D+L+ +V + +++AL A GL ++H
Sbjct: 71 GTWTQLWLVSDYHEHGSLFDYLNRYTVTVE------GMIKLALSTASGLAHLHMEIVGTQ 124
Query: 129 -KPYYVHRDVKTSNILLDSNFRAKIADFGL-VKLLEHSPEIAAAASRIVGTFGYLAPEYV 186
KP HRD+K+ NIL+ N IAD GL V+ + I A + VGT Y+APE +
Sbjct: 125 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 184
Query: 187 RDGCVT------TKSDVYAFGVVLMEL 207
D ++D+YA G+V E+
Sbjct: 185 DDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 25/207 (12%)
Query: 20 IGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKVHSNLIELIGYAAGGD--- 76
IG+G +G V+ GK RG+ A+K + + + + E +I V ++G+ A +
Sbjct: 50 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 109
Query: 77 ----SLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT---- 128
L+LV +Y ++G+L D+L+ +V + +++AL A GL ++H
Sbjct: 110 GTWTQLWLVSDYHEHGSLFDYLNRYTVTVEG------MIKLALSTASGLAHLHMEIVGTQ 163
Query: 129 -KPYYVHRDVKTSNILLDSNFRAKIADFGL-VKLLEHSPEIAAAASRIVGTFGYLAPEYV 186
KP HRD+K+ NIL+ N IAD GL V+ + I A + VGT Y+APE +
Sbjct: 164 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 223
Query: 187 RDGCVT------TKSDVYAFGVVLMEL 207
D ++D+YA G+V E+
Sbjct: 224 DDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 25/207 (12%)
Query: 20 IGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKVHSNLIELIGYAAGGD--- 76
IG+G +G V+ GK RG+ A+K + + + + E +I V ++G+ A +
Sbjct: 14 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 73
Query: 77 ----SLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT---- 128
L+LV +Y ++G+L D+L+ +V + +++AL A GL ++H
Sbjct: 74 GTWTQLWLVSDYHEHGSLFDYLNRYTVTVE------GMIKLALSTASGLAHLHMEIVGTQ 127
Query: 129 -KPYYVHRDVKTSNILLDSNFRAKIADFGL-VKLLEHSPEIAAAASRIVGTFGYLAPEYV 186
KP HRD+K+ NIL+ N IAD GL V+ + I A + VGT Y+APE +
Sbjct: 128 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 187
Query: 187 RDGCVT------TKSDVYAFGVVLMEL 207
D ++D+YA G+V E+
Sbjct: 188 DDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 25/207 (12%)
Query: 20 IGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKVHSNLIELIGYAAGGD--- 76
IG+G +G V+ GK RG+ A+K + + + + E +I V ++G+ A +
Sbjct: 17 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 76
Query: 77 ----SLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT---- 128
L+LV +Y ++G+L D+L+ +V + +++AL A GL ++H
Sbjct: 77 GTWTQLWLVSDYHEHGSLFDYLNRYTVTVE------GMIKLALSTASGLAHLHMEIVGTQ 130
Query: 129 -KPYYVHRDVKTSNILLDSNFRAKIADFGL-VKLLEHSPEIAAAASRIVGTFGYLAPEYV 186
KP HRD+K+ NIL+ N IAD GL V+ + I A + VGT Y+APE +
Sbjct: 131 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 190
Query: 187 RDGCVT------TKSDVYAFGVVLMEL 207
D ++D+YA G+V E+
Sbjct: 191 DDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 25/207 (12%)
Query: 20 IGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKVHSNLIELIGYAAGGD--- 76
IG+G +G V+ GK RG+ A+K + + + + E +I V ++G+ A +
Sbjct: 37 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 96
Query: 77 ----SLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT---- 128
L+LV +Y ++G+L D+L+ +V + +++AL A GL ++H
Sbjct: 97 GTWTQLWLVSDYHEHGSLFDYLNRYTVTVEG------MIKLALSTASGLAHLHMEIVGTQ 150
Query: 129 -KPYYVHRDVKTSNILLDSNFRAKIADFGL-VKLLEHSPEIAAAASRIVGTFGYLAPEYV 186
KP HRD+K+ NIL+ N IAD GL V+ + I A + VGT Y+APE +
Sbjct: 151 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 210
Query: 187 RDGCVT------TKSDVYAFGVVLMEL 207
D ++D+YA G+V E+
Sbjct: 211 DDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 108/227 (47%), Gaps = 26/227 (11%)
Query: 2 FSYNEVRDATSNFSTSLK---------IGQGSYGSVYLGKLR--GKN---AAIKQMK--- 44
F++ + A F+ + IG G +G V G+L+ GK AIK +K
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 45 -NTKSKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGK 102
+ + ++F SE I+ + H N+I L G + ++ EY +NG+L L K
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR----KND 125
Query: 103 KPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLE 162
V + G++Y+ + VHRD+ NIL++SN K++DFG+ ++LE
Sbjct: 126 GRFTVIQLVGMLRGIGSGMKYLSDMSA---VHRDLAARNILVNSNLVCKVSDFGMSRVLE 182
Query: 163 HSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
PE A + APE + T+ SDV+++G+V+ E+++
Sbjct: 183 DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 19/202 (9%)
Query: 19 KIGQGSYGSVYLGK--LRGKNAAIKQM------KNTKSKEFSSELKILCKV-HSNLIELI 69
K+G G +VYL + + AIK + K K F E+ ++ H N++ +I
Sbjct: 18 KLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMI 77
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTK 129
D +LV EY + LS++ ++ PL+ T + G+++ H
Sbjct: 78 DVDEEDDCYYLVMEYIEGPTLSEY-----IESHGPLSVDTAINFTNQILDGIKHAHDMR- 131
Query: 130 PYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG 189
VHRD+K NIL+DSN KI DFG+ K L + + ++GT Y +PE +
Sbjct: 132 --IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS--LTQTNHVLGTVQYFSPEQAKGE 187
Query: 190 CVTTKSDVYAFGVVLMELITGQ 211
+D+Y+ G+VL E++ G+
Sbjct: 188 ATDECTDIYSIGIVLYEMLVGE 209
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 134/311 (43%), Gaps = 62/311 (19%)
Query: 20 IGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKVHSNLIELIGYAAG----- 74
+G+G YG V+ G +G+N A+K + K + E ++ V ++G+ A
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSR 75
Query: 75 --GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIH-----QY 127
L+L+ Y + G+L D+L ++ L +I L A GL ++H
Sbjct: 76 HSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCL------RIVLSIASGLAHLHIEIFGTQ 129
Query: 128 TKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSP-EIAAAASRIVGTFGYLAPEY- 185
KP HRD+K+ NIL+ N + IAD GL + S ++ + VGT Y+APE
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 189
Query: 186 ---VRDGCVTT--KSDVYAFGVVLME---------LITGQQALSRDANPGNNQYTEHRSL 231
++ C + + D++AFG+VL E ++ + D P + + + R +
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKV 249
Query: 232 VDYMLAVFNDTKDFMAKLTECLD---PNL-TRYHKDSML-QMALLSKDCVDENWKRRPDM 286
V C+D PN+ R+ D L +A L K+C W + P
Sbjct: 250 V-------------------CVDQQRPNIPNRWFSDPTLTSLAKLMKEC----WYQNPSA 286
Query: 287 SNAAIRLSHIL 297
A+R+ L
Sbjct: 287 RLTALRIKKTL 297
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 134/311 (43%), Gaps = 62/311 (19%)
Query: 20 IGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKVHSNLIELIGYAAG----- 74
+G+G YG V+ G +G+N A+K + K + E ++ V ++G+ A
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSR 75
Query: 75 --GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIH-----QY 127
L+L+ Y + G+L D+L ++ L +I L A GL ++H
Sbjct: 76 HSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCL------RIVLSIASGLAHLHIEIFGTQ 129
Query: 128 TKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSP-EIAAAASRIVGTFGYLAPEY- 185
KP HRD+K+ NIL+ N + IAD GL + S ++ + VGT Y+APE
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 189
Query: 186 ---VRDGCVTT--KSDVYAFGVVLME---------LITGQQALSRDANPGNNQYTEHRSL 231
++ C + + D++AFG+VL E ++ + D P + + + R +
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKV 249
Query: 232 VDYMLAVFNDTKDFMAKLTECLD---PNL-TRYHKDSML-QMALLSKDCVDENWKRRPDM 286
V C+D PN+ R+ D L +A L K+C W + P
Sbjct: 250 V-------------------CVDQQRPNIPNRWFSDPTLTSLAKLMKEC----WYQNPSA 286
Query: 287 SNAAIRLSHIL 297
A+R+ L
Sbjct: 287 RLTALRIKKTL 297
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 110/227 (48%), Gaps = 24/227 (10%)
Query: 13 NFSTSLKIGQGSYGSVYLG----------KLRGKNAAIKQMKNTKSKEFSSELKILCKV- 61
N ++G+G++G V+L K+ +K + K+F E ++L +
Sbjct: 14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ 73
Query: 62 HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSV----KGKKP--LAWTTRVQI 113
H ++++ G GD L +V+EY ++G L+ L H P +G P L + + I
Sbjct: 74 HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHI 133
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
A A G+ Y+ ++VHRD+ T N L+ N KI DFG+ + + +S +
Sbjct: 134 AQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDV-YSTDYYRVGGH 189
Query: 174 IVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDAN 219
+ ++ PE + TT+SDV++ GVVL E+ T G+Q + +N
Sbjct: 190 TMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN 236
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 134/311 (43%), Gaps = 62/311 (19%)
Query: 20 IGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKVHSNLIELIGYAAG----- 74
+G+G YG V+ G +G+N A+K + K + E ++ V ++G+ A
Sbjct: 45 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSR 104
Query: 75 --GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIH-----QY 127
L+L+ Y + G+L D+L ++ L +I L A GL ++H
Sbjct: 105 HSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCL------RIVLSIASGLAHLHIEIFGTQ 158
Query: 128 TKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSP-EIAAAASRIVGTFGYLAPEY- 185
KP HRD+K+ NIL+ N + IAD GL + S ++ + VGT Y+APE
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 218
Query: 186 ---VRDGCVTT--KSDVYAFGVVLME---------LITGQQALSRDANPGNNQYTEHRSL 231
++ C + + D++AFG+VL E ++ + D P + + + R +
Sbjct: 219 DETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKV 278
Query: 232 VDYMLAVFNDTKDFMAKLTECLD---PNL-TRYHKDSML-QMALLSKDCVDENWKRRPDM 286
V C+D PN+ R+ D L +A L K+C W + P
Sbjct: 279 V-------------------CVDQQRPNIPNRWFSDPTLTSLAKLMKEC----WYQNPSA 315
Query: 287 SNAAIRLSHIL 297
A+R+ L
Sbjct: 316 RLTALRIKKTL 326
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 113/246 (45%), Gaps = 32/246 (13%)
Query: 22 QGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILC---KVHSNLIELIGYAAGGDS- 77
+G +G V+ +L + A+K + + +E ++ H N+++ IG G S
Sbjct: 34 RGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSV 93
Query: 78 ---LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT------ 128
L+L+ + + G+LSD L ++W IA A+GL Y+H+
Sbjct: 94 DVDLWLITAFHEKGSLSDFLK------ANVVSWNELCHIAETMARGLAYLHEDIPGLKDG 147
Query: 129 -KPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVR 187
KP HRD+K+ N+LL +N A IADFGL E + + A VGT Y+APE V
Sbjct: 148 HKPAISHRDIKSKNVLLKNNLTACIADFGLALKFE-AGKSAGDTHGQVGTRRYMAPE-VL 205
Query: 188 DGCVT------TKSDVYAFGVVLMELITGQQALSRDAN----PGNNQYTEHRSLVDYMLA 237
+G + + D+YA G+VL EL + A + P + +H SL D
Sbjct: 206 EGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEV 265
Query: 238 VFNDTK 243
V + K
Sbjct: 266 VVHKKK 271
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 108/217 (49%), Gaps = 21/217 (9%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRG-------KNAAIKQMKNTKSK----EFSSELKIL 58
A + S ++GQGS+G VY G +G AIK + S EF +E ++
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 59 CKVHSN-LIELIGYAAGGDSLFLVYEYAQNGALSDHLH--WPSVKGKK---PLAWTTRVQ 112
+ + + ++ L+G + G ++ E G L +L P ++ P + + +Q
Sbjct: 76 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 135
Query: 113 IALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAAS 172
+A + A G+ Y++ +VHRD+ N ++ +F KI DFG+ + + + +
Sbjct: 136 MAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRKGG 191
Query: 173 RIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ + +++PE ++DG TT SDV++FGVVL E+ T
Sbjct: 192 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 108/217 (49%), Gaps = 21/217 (9%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRG-------KNAAIKQMKNTKSK----EFSSELKIL 58
A + S ++GQGS+G VY G +G AIK + S EF +E ++
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 59 CKVHSN-LIELIGYAAGGDSLFLVYEYAQNGALSDHLH--WPSVKGKK---PLAWTTRVQ 112
+ + + ++ L+G + G ++ E G L +L P ++ P + + +Q
Sbjct: 83 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 142
Query: 113 IALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAAS 172
+A + A G+ Y++ +VHRD+ N ++ +F KI DFG+ + + + +
Sbjct: 143 MAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRKGG 198
Query: 173 RIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ + +++PE ++DG TT SDV++FGVVL E+ T
Sbjct: 199 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 19/202 (9%)
Query: 20 IGQGSYGSVYLGKLRGKN-----AAIKQMKN----TKSKEFSSELKILCKV-HSNLIELI 69
IG G +G V G+L+ AIK +K + +EF SE I+ + H N+I L
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTK 129
G + ++ E+ +NGAL L V + A G+ Y+ + +
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFLRL----NDGQFTVIQLVGMLRGIASGMRYLAEMS- 138
Query: 130 PYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG--YLAPEYVR 187
YVHRD+ NIL++SN K++DFGL + LE + S + G + APE +
Sbjct: 139 --YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIA 196
Query: 188 DGCVTTKSDVYAFGVVLMELIT 209
T+ SD +++G+V+ E+++
Sbjct: 197 FRKFTSASDAWSYGIVMWEVMS 218
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 13/203 (6%)
Query: 12 SNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK--NTKSKEFSSELKILCKV-HSNLI 66
++ + K+G G YG VY G K A+K +K + +EF E ++ ++ H NL+
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 70
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ 126
+L+G +++ E+ G L D+L ++ ++ + +A + +EY+
Sbjct: 71 QLLGVCTREPPFYIIIEFMTYGNLLDYLR---ECNRQEVSAVVLLYMATQISSAMEYLE- 126
Query: 127 YTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV 186
K ++HRD+ N L+ N K+ADFGL +L+ A A ++ + APE +
Sbjct: 127 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPESL 182
Query: 187 RDGCVTTKSDVYAFGVVLMELIT 209
+ KSDV+AFGV+L E+ T
Sbjct: 183 AYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 108/217 (49%), Gaps = 21/217 (9%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRG-------KNAAIKQMKNTKSK----EFSSELKIL 58
A + S ++GQGS+G VY G +G AIK + S EF +E ++
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 59 CKVHSN-LIELIGYAAGGDSLFLVYEYAQNGALSDHLH--WPSVKGKK---PLAWTTRVQ 112
+ + + ++ L+G + G ++ E G L +L P ++ P + + +Q
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 129
Query: 113 IALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAAS 172
+A + A G+ Y++ +VHRD+ N ++ +F KI DFG+ + + + +
Sbjct: 130 MAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRKGG 185
Query: 173 RIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ + +++PE ++DG TT SDV++FGVVL E+ T
Sbjct: 186 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 108/217 (49%), Gaps = 21/217 (9%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRG-------KNAAIKQMKNTKSK----EFSSELKIL 58
A + S ++GQGS+G VY G +G AIK + S EF +E ++
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 59 CKVHSN-LIELIGYAAGGDSLFLVYEYAQNGALSDHLH--WPSVKGKK---PLAWTTRVQ 112
+ + + ++ L+G + G ++ E G L +L P ++ P + + +Q
Sbjct: 76 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 135
Query: 113 IALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAAS 172
+A + A G+ Y++ +VHRD+ N ++ +F KI DFG+ + + + +
Sbjct: 136 MAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRKGG 191
Query: 173 RIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ + +++PE ++DG TT SDV++FGVVL E+ T
Sbjct: 192 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 106/212 (50%), Gaps = 13/212 (6%)
Query: 3 SYNEVRDATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK--NTKSKEFSSELKIL 58
+Y++ ++ + K+G G YG VY G K A+K +K + +EF E ++
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
++ H NL++L+G +++ E+ G L D+L ++ ++ + +A
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLR---ECNRQEVSAVVLLYMATQI 120
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGT 177
+ +EY+ K ++HRD+ N L+ N K+ADFGL +L+ A A ++
Sbjct: 121 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--P 175
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ APE + + KSDV+AFGV+L E+ T
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 117/223 (52%), Gaps = 33/223 (14%)
Query: 1 MFSYNEVRDATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQM---KNTKSKEFSSEL 55
+ S + R+ +NF +KIG+GS G V + K GK A+K+M K + + +E+
Sbjct: 37 VVSPGDPREYLANF---IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEV 93
Query: 56 KILCKVH-SNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRV--- 111
I+ H N++++ GD L++V E+ + GAL+D + TR+
Sbjct: 94 VIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTD------------IVTHTRMNEE 141
Query: 112 QIA---LDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIA 168
QIA L + L Y+H +HRD+K+ +ILL S+ R K++DFG + S E+
Sbjct: 142 QIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCA--QVSKEVP 196
Query: 169 AAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQ 211
+VGT ++APE + T+ D+++ G++++E+I G+
Sbjct: 197 KRKX-LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGE 238
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 108/217 (49%), Gaps = 21/217 (9%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRG-------KNAAIKQMKNTKSK----EFSSELKIL 58
A + S ++GQGS+G VY G +G AIK + S EF +E ++
Sbjct: 45 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 104
Query: 59 CKVHSN-LIELIGYAAGGDSLFLVYEYAQNGALSDHLH--WPSVKGKK---PLAWTTRVQ 112
+ + + ++ L+G + G ++ E G L +L P ++ P + + +Q
Sbjct: 105 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 164
Query: 113 IALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAAS 172
+A + A G+ Y++ +VHRD+ N ++ +F KI DFG+ + + + +
Sbjct: 165 MAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRKGG 220
Query: 173 RIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ + +++PE ++DG TT SDV++FGVVL E+ T
Sbjct: 221 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 106/212 (50%), Gaps = 13/212 (6%)
Query: 3 SYNEVRDATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK--NTKSKEFSSELKIL 58
+Y++ ++ + K+G G YG VY G K A+K +K + +EF E ++
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
++ H NL++L+G +++ E+ G L D+L ++ ++ + +A
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLR---ECNRQEVSAVVLLYMATQI 120
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGT 177
+ +EY+ K ++HRD+ N L+ N K+ADFGL +L+ A A ++
Sbjct: 121 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--P 175
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ APE + + KSDV+AFGV+L E+ T
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 108/217 (49%), Gaps = 21/217 (9%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRG-------KNAAIKQMKNTKSK----EFSSELKIL 58
A + S ++GQGS+G VY G +G AIK + S EF +E ++
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 59 CKVHSN-LIELIGYAAGGDSLFLVYEYAQNGALSDHLH--WPSVKGKK---PLAWTTRVQ 112
+ + + ++ L+G + G ++ E G L +L P++ P + + +Q
Sbjct: 83 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 142
Query: 113 IALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAAS 172
+A + A G+ Y++ +VHRD+ N ++ +F KI DFG+ + + + +
Sbjct: 143 MAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRKGG 198
Query: 173 RIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ + +++PE ++DG TT SDV++FGVVL E+ T
Sbjct: 199 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 106/212 (50%), Gaps = 13/212 (6%)
Query: 3 SYNEVRDATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK--NTKSKEFSSELKIL 58
+Y++ ++ + K+G G YG VY G K A+K +K + +EF E ++
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
++ H NL++L+G +++ E+ G L D+L ++ ++ + +A
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR---ECNRQEVSAVVLLYMATQI 120
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGT 177
+ +EY+ K ++HRD+ N L+ N K+ADFGL +L+ A A ++
Sbjct: 121 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--P 175
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ APE + + KSDV+AFGV+L E+ T
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 108/217 (49%), Gaps = 21/217 (9%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRG-------KNAAIKQMKNTKSK----EFSSELKIL 58
A + S ++GQGS+G VY G +G AIK + S EF +E ++
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 59 CKVHSN-LIELIGYAAGGDSLFLVYEYAQNGALSDHLH--WPSVKGKK---PLAWTTRVQ 112
+ + + ++ L+G + G ++ E G L +L P ++ P + + +Q
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 136
Query: 113 IALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAAS 172
+A + A G+ Y++ +VHRD+ N ++ +F KI DFG+ + + + +
Sbjct: 137 MAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRKGG 192
Query: 173 RIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ + +++PE ++DG TT SDV++FGVVL E+ T
Sbjct: 193 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 109/229 (47%), Gaps = 28/229 (12%)
Query: 2 FSYNEVRDATSNFSTSLKI---------GQGSYGSVYLG--KLRGKN---AAIKQMKN-- 45
F++ + +A F+ + I G G +G V G KL GK AIK +K+
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 46 --TKSKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGK 102
+ ++F SE I+ + H N+I L G + ++ E+ +NG+L L +
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR----QND 129
Query: 103 KPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLE 162
V + A G++Y+ YVHRD+ NIL++SN K++DFGL + LE
Sbjct: 130 GQFTVIQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLE 186
Query: 163 HSPEIAAAASRIVGTFG--YLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
S + G + APE ++ T+ SDV+++G+V+ E+++
Sbjct: 187 DDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 108/223 (48%), Gaps = 26/223 (11%)
Query: 19 KIGQGSYGSVYLG----------KLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIE 67
++G+G++G V+L K+ A+K+ + ++F E ++L + H +++
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 68 LIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVK--------GKKPLAWTTRVQIALDA 117
G G L +V+EY ++G L+ L H P K PL + +A
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGT 177
A G+ Y+ ++VHRD+ T N L+ KI DFG+ + + +S + R +
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI-YSTDYYRVGGRTMLP 194
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDAN 219
++ PE + TT+SDV++FGVVL E+ T G+Q + +N
Sbjct: 195 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN 237
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 108/223 (48%), Gaps = 26/223 (11%)
Query: 19 KIGQGSYGSVYLG----------KLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIE 67
++G+G++G V+L K+ A+K+ + ++F E ++L + H +++
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 68 LIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVK--------GKKPLAWTTRVQIALDA 117
G G L +V+EY ++G L+ L H P K PL + +A
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGT 177
A G+ Y+ ++VHRD+ T N L+ KI DFG+ + + +S + R +
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI-YSTDYYRVGGRTMLP 200
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDAN 219
++ PE + TT+SDV++FGVVL E+ T G+Q + +N
Sbjct: 201 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN 243
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 21/208 (10%)
Query: 19 KIGQGSYGSVYLGKLRG-------KNAAIKQMKNTKSK----EFSSELKILCKVHSN-LI 66
++GQGS+G VY G R A+K + + S EF +E ++ + ++
Sbjct: 21 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLH--WPSVK---GKKPLAWTTRVQIALDAAKGL 121
L+G + G +V E +G L +L P + G+ P +Q+A + A G+
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 122 EYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYL 181
Y++ +VHRD+ N ++ +F KI DFG+ + + + ++ ++
Sbjct: 141 AYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLL-PVRWM 196
Query: 182 APEYVRDGCVTTKSDVYAFGVVLMELIT 209
APE ++DG TT SD+++FGVVL E+ +
Sbjct: 197 APESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 13/212 (6%)
Query: 3 SYNEVRDATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK--NTKSKEFSSELKIL 58
+Y++ ++ + K+G G YG VY G K A+K +K + +EF E ++
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 64
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
++ H NL++L+G +++ E+ G L D+L ++ + + +A
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLR---ECNRQEVNAVVLLYMATQI 121
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGT 177
+ +EY+ K ++HRD+ N L+ N K+ADFGL +L+ A A ++
Sbjct: 122 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--P 176
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ APE + + KSDV+AFGV+L E+ T
Sbjct: 177 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 19/202 (9%)
Query: 20 IGQGSYGSVYLGKLRGKN-----AAIKQMKN----TKSKEFSSELKILCKV-HSNLIELI 69
IG G +G V G+L+ AIK +K + +EF SE I+ + H N+I L
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTK 129
G + ++ E+ +NGAL L V + A G+ Y+ + +
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFLR----LNDGQFTVIQLVGMLRGIASGMRYLAEMS- 136
Query: 130 PYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG--YLAPEYVR 187
YVHRD+ NIL++SN K++DFGL + LE + S + G + APE +
Sbjct: 137 --YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIA 194
Query: 188 DGCVTTKSDVYAFGVVLMELIT 209
T+ SD +++G+V+ E+++
Sbjct: 195 FRKFTSASDAWSYGIVMWEVMS 216
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 106/212 (50%), Gaps = 13/212 (6%)
Query: 3 SYNEVRDATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK--NTKSKEFSSELKIL 58
+Y++ ++ + K+G G YG VY G K A+K +K + +EF E ++
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
++ H NL++L+G +++ E+ G L D+L ++ ++ + +A
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR---ECNRQEVSAVVLLYMATQI 120
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGT 177
+ +EY+ K ++HRD+ N L+ N K+ADFGL +L+ A A ++
Sbjct: 121 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--P 175
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ APE + + KSDV+AFGV+L E+ T
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 13/212 (6%)
Query: 3 SYNEVRDATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK--NTKSKEFSSELKIL 58
+Y++ ++ + K+G G YG VY G K A+K +K + +EF E ++
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 64
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
++ H NL++L+G +++ E+ G L D+L ++ + + +A
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR---ECNRQEVNAVVLLYMATQI 121
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGT 177
+ +EY+ K ++HRD+ N L+ N K+ADFGL +L+ A A ++
Sbjct: 122 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKF--P 176
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ APE + + KSDV+AFGV+L E+ T
Sbjct: 177 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 108/217 (49%), Gaps = 21/217 (9%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRG-------KNAAIKQMKNTKSK----EFSSELKIL 58
A + S ++GQGS+G VY G +G AIK + S EF +E ++
Sbjct: 13 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 72
Query: 59 CKVHSN-LIELIGYAAGGDSLFLVYEYAQNGALSDHLH--WPSVKGKK---PLAWTTRVQ 112
+ + + ++ L+G + G ++ E G L +L P++ P + + +Q
Sbjct: 73 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 132
Query: 113 IALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAAS 172
+A + A G+ Y++ +VHRD+ N ++ +F KI DFG+ + + + +
Sbjct: 133 MAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRKGG 188
Query: 173 RIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ + +++PE ++DG TT SDV++FGVVL E+ T
Sbjct: 189 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 13/212 (6%)
Query: 3 SYNEVRDATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK--NTKSKEFSSELKIL 58
+Y++ ++ + K+G G YG VY G K A+K +K + +EF E ++
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
++ H NL++L+G +++ E+ G L D+L ++ + + +A
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR---ECNRQEVNAVVLLYMATQI 125
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGT 177
+ +EY+ K ++HRD+ N L+ N K+ADFGL +L+ A A ++
Sbjct: 126 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--P 180
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ APE + + KSDV+AFGV+L E+ T
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 106/212 (50%), Gaps = 13/212 (6%)
Query: 3 SYNEVRDATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK--NTKSKEFSSELKIL 58
+Y++ ++ + K+G G YG VY G K A+K +K + +EF E ++
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
++ H NL++L+G +++ E+ G L D+L ++ ++ + +A
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR---ECNRQEVSAVVLLYMATQI 125
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGT 177
+ +EY+ K ++HRD+ N L+ N K+ADFGL +L+ A A ++
Sbjct: 126 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--P 180
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ APE + + KSDV+AFGV+L E+ T
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 21/208 (10%)
Query: 19 KIGQGSYGSVYLGKLRG-------KNAAIKQMKNTKSK----EFSSELKILCKVHSN-LI 66
++GQGS+G VY G R A+K + + S EF +E ++ + ++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLH--WPSVK---GKKPLAWTTRVQIALDAAKGL 121
L+G + G +V E +G L +L P + G+ P +Q+A + A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 122 EYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYL 181
Y++ +VHRD+ N ++ +F KI DFG+ + + + ++ ++
Sbjct: 144 AYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLL-PVRWM 199
Query: 182 APEYVRDGCVTTKSDVYAFGVVLMELIT 209
APE ++DG TT SD+++FGVVL E+ +
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 35/214 (16%)
Query: 19 KIGQGSYGSVYLGKLRGKNAAIKQMKN-------------TKSKEFSSELKILCKV-HSN 64
+IG+G +G V+ G+L K+ ++ +K+ K +EF E+ I+ + H N
Sbjct: 26 QIGKGGFGLVHKGRLV-KDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYI 124
+++L G + V E+ G L L + P+ W+ ++++ LD A G+EY+
Sbjct: 85 IVKLYGLMHNPPRM--VMEFVPCGDLYHRL----LDKAHPIKWSVKLRLMLDIALGIEYM 138
Query: 125 HQYTKPYYVHRDVKTSNILLDS-----NFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG 179
Q P VHRD+++ NI L S AK+ADFG + HS S ++G F
Sbjct: 139 -QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHS------VSGLLGNFQ 191
Query: 180 YLAPEYV--RDGCVTTKSDVYAFGVVLMELITGQ 211
++APE + + T K+D Y+F ++L ++TG+
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 13/212 (6%)
Query: 3 SYNEVRDATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK--NTKSKEFSSELKIL 58
+Y++ ++ + K+G G YG VY G K A+K +K + +EF E ++
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 65
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
++ H NL++L+G +++ E+ G L D+L ++ + + +A
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR---ECNRQEVNAVVLLYMATQI 122
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGT 177
+ +EY+ K ++HRD+ N L+ N K+ADFGL +L+ A A ++
Sbjct: 123 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKF--P 177
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ APE + + KSDV+AFGV+L E+ T
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 21/208 (10%)
Query: 19 KIGQGSYGSVYLGKLRG-------KNAAIKQMKNTKSK----EFSSELKILCKVHSN-LI 66
++GQGS+G VY G R A+K + + S EF +E ++ + ++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLH--WPSVK---GKKPLAWTTRVQIALDAAKGL 121
L+G + G +V E +G L +L P + G+ P +Q+A + A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 122 EYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYL 181
Y++ +VHRD+ N ++ +F KI DFG+ + + + ++ ++
Sbjct: 144 AYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLL-PVRWM 199
Query: 182 APEYVRDGCVTTKSDVYAFGVVLMELIT 209
APE ++DG TT SD+++FGVVL E+ +
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 35/214 (16%)
Query: 19 KIGQGSYGSVYLGKLRGKNAAIKQMKN-------------TKSKEFSSELKILCKV-HSN 64
+IG+G +G V+ G+L K+ ++ +K+ K +EF E+ I+ + H N
Sbjct: 26 QIGKGGFGLVHKGRLV-KDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYI 124
+++L G + V E+ G L L + P+ W+ ++++ LD A G+EY+
Sbjct: 85 IVKLYGLMHNPPRM--VMEFVPCGDLYHRL----LDKAHPIKWSVKLRLMLDIALGIEYM 138
Query: 125 HQYTKPYYVHRDVKTSNILLDS-----NFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG 179
Q P VHRD+++ NI L S AK+ADF L + HS S ++G F
Sbjct: 139 -QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHS------VSGLLGNFQ 191
Query: 180 YLAPEYV--RDGCVTTKSDVYAFGVVLMELITGQ 211
++APE + + T K+D Y+F ++L ++TG+
Sbjct: 192 WMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 13/212 (6%)
Query: 3 SYNEVRDATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK--NTKSKEFSSELKIL 58
+Y++ ++ + K+G G YG VY G K A+K +K + +EF E ++
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
++ H NL++L+G +++ E+ G L D+L ++ + + +A
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLR---ECNRQEVNAVVLLYMATQI 125
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGT 177
+ +EY+ K ++HRD+ N L+ N K+ADFGL +L+ A A ++
Sbjct: 126 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--P 180
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ APE + + KSDV+AFGV+L E+ T
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 108/223 (48%), Gaps = 26/223 (11%)
Query: 19 KIGQGSYGSVYLG----------KLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIE 67
++G+G++G V+L K+ A+K+ + ++F E ++L + H +++
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 68 LIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVK--------GKKPLAWTTRVQIALDA 117
G G L +V+EY ++G L+ L H P K PL + +A
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGT 177
A G+ Y+ ++VHRD+ T N L+ KI DFG+ + + +S + R +
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI-YSTDYYRVGGRTMLP 223
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDAN 219
++ PE + TT+SDV++FGVVL E+ T G+Q + +N
Sbjct: 224 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN 266
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 15/195 (7%)
Query: 19 KIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKE----FSSELKILCKV-HSNLIELIGY 71
+IG+G++G V+ G+LR N A+K + T + F E +IL + H N++ LIG
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 72 AAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPY 131
+++V E Q G D L + +G + L T +Q+ DAA G+EY+
Sbjct: 181 CTQKQPIYIVMELVQGG---DFLTFLRTEGAR-LRVKTLLQMVGDAAAGMEYLESKC--- 233
Query: 132 YVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCV 191
+HRD+ N L+ KI+DFG+ + A+ R V + APE + G
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQV-PVKWTAPEALNYGRY 292
Query: 192 TTKSDVYAFGVVLME 206
+++SDV++FG++L E
Sbjct: 293 SSESDVWSFGILLWE 307
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 20 IGQGSYGSVYL------GKLRGKNAAIKQMKNTKS----KEFSSELKILCKV-HSNLIEL 68
+G+G +G V L G G+ A+K +K + E++IL + H N+++
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 69 IGYAA--GGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ 126
G GG+ + L+ E+ +G+L ++L K K + +++ A+ KG++Y+
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL----PKNKNKINLKQQLKYAVQICKGMDYLGS 132
Query: 127 YTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV 186
YVHRD+ N+L++S + KI DFGL K +E E + APE +
Sbjct: 133 RQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL 189
Query: 187 RDGCVTTKSDVYAFGVVLMELIT 209
SDV++FGV L EL+T
Sbjct: 190 MQSKFYIASDVWSFGVTLHELLT 212
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 8/144 (5%)
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
G ++V EY L D +H + P+ +++ DA + L + HQ +H
Sbjct: 88 GPLPYIVMEYVDGVTLRDIVHT-----EGPMTPKRAIEVIADACQALNFSHQNG---IIH 139
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RDVK +NIL+ + K+ DFG+ + + S + ++GT YL+PE R V +
Sbjct: 140 RDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDAR 199
Query: 195 SDVYAFGVVLMELITGQQALSRDA 218
SDVY+ G VL E++TG+ + D+
Sbjct: 200 SDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 20 IGQGSYGSVYL------GKLRGKNAAIKQMKNTKS----KEFSSELKILCKV-HSNLIEL 68
+G+G +G V L G G+ A+K +K + E++IL + H N+++
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 69 IGYAA--GGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ 126
G GG+ + L+ E+ +G+L ++L K K + +++ A+ KG++Y+
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL----PKNKNKINLKQQLKYAVQICKGMDYLGS 144
Query: 127 YTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV 186
YVHRD+ N+L++S + KI DFGL K +E E + APE +
Sbjct: 145 RQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL 201
Query: 187 RDGCVTTKSDVYAFGVVLMELIT 209
SDV++FGV L EL+T
Sbjct: 202 MQSKFYIASDVWSFGVTLHELLT 224
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 13/212 (6%)
Query: 3 SYNEVRDATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK--NTKSKEFSSELKIL 58
+Y++ ++ + K+G G YG VY G K A+K +K + +EF E ++
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
++ H NL++L+G +++ E+ G L D+L ++ + + +A
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR---ECNRQEVNAVVLLYMATQI 125
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGT 177
+ +EY+ K ++HRD+ N L+ N K+ADFGL +L+ A A ++
Sbjct: 126 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--P 180
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ APE + + KSDV+AFGV+L E+ T
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 13/203 (6%)
Query: 12 SNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK--NTKSKEFSSELKILCKV-HSNLI 66
++ + K+G G YG VY G K A+K +K + +EF E ++ ++ H NL+
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 70
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ 126
+L+G +++ E+ G L D+L ++ ++ + +A + +EY+
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYLR---ECNRQEVSAVVLLYMATQISSAMEYLE- 126
Query: 127 YTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV 186
K ++HRD+ N L+ N K+ADFGL +L+ A A ++ + APE +
Sbjct: 127 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKF--PIKWTAPESL 182
Query: 187 RDGCVTTKSDVYAFGVVLMELIT 209
+ KSDV+AFGV+L E+ T
Sbjct: 183 AYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 13/212 (6%)
Query: 3 SYNEVRDATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK--NTKSKEFSSELKIL 58
+Y++ ++ + K+G G YG VY G K A+K +K + +EF E ++
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 67
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
++ H NL++L+G +++ E+ G L D+L ++ + + +A
Sbjct: 68 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR---ECNRQEVNAVVLLYMATQI 124
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGT 177
+ +EY+ K ++HRD+ N L+ N K+ADFGL +L+ A A ++
Sbjct: 125 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--P 179
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ APE + + KSDV+AFGV+L E+ T
Sbjct: 180 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 13/212 (6%)
Query: 3 SYNEVRDATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK--NTKSKEFSSELKIL 58
+Y++ ++ + K+G G YG VY G K A+K +K + +EF E ++
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
++ H NL++L+G +++ E+ G L D+L ++ + + +A
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR---ECNRQEVNAVVLLYMATQI 120
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGT 177
+ +EY+ K ++HRD+ N L+ N K+ADFGL +L+ A A ++
Sbjct: 121 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--P 175
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ APE + + KSDV+AFGV+L E+ T
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 13/212 (6%)
Query: 3 SYNEVRDATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK--NTKSKEFSSELKIL 58
+Y++ ++ + K+G G YG VY G K A+K +K + +EF E ++
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 76
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
++ H NL++L+G +++ E+ G L D+L ++ + + +A
Sbjct: 77 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR---ECNRQEVNAVVLLYMATQI 133
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGT 177
+ +EY+ K ++HRD+ N L+ N K+ADFGL +L+ A A ++
Sbjct: 134 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--P 188
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ APE + + KSDV+AFGV+L E+ T
Sbjct: 189 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 24/214 (11%)
Query: 9 DATSNFSTSLKIGQGSYGSVYLGKLRGKN-----AAIKQMK----NTKSKEFSSELKILC 59
DAT N S +G G +G V G+L+ + AIK +K + ++F E I+
Sbjct: 43 DAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 60 KV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIA---L 115
+ H N+I L G + +V E +NG+L L +K A T +Q+
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL-------RKHDAQFTVIQLVGMLR 154
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
A G++Y+ VHRD+ NIL++SN K++DFGL ++LE PE A
Sbjct: 155 GIASGMKYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ +PE + T+ SDV+++G+VL E+++
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 13/212 (6%)
Query: 3 SYNEVRDATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK--NTKSKEFSSELKIL 58
+Y++ ++ + K+G G YG VY G K A+K +K + +EF E ++
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 65
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
++ H NL++L+G +++ E+ G L D+L ++ + + +A
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR---ECNRQEVNAVVLLYMATQI 122
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGT 177
+ +EY+ K ++HRD+ N L+ N K+ADFGL +L+ A A ++
Sbjct: 123 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--P 177
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ APE + + KSDV+AFGV+L E+ T
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 13/212 (6%)
Query: 3 SYNEVRDATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK--NTKSKEFSSELKIL 58
+Y++ ++ + K+G G YG VY G K A+K +K + +EF E ++
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
++ H NL++L+G +++ E+ G L D+L ++ + + +A
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR---ECNRQEVNAVVLLYMATQI 120
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGT 177
+ +EY+ K ++HRD+ N L+ N K+ADFGL +L+ A A ++
Sbjct: 121 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--P 175
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ APE + + KSDV+AFGV+L E+ T
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 102/203 (50%), Gaps = 13/203 (6%)
Query: 12 SNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK--NTKSKEFSSELKILCKV-HSNLI 66
++ + K+G G +G VY G K A+K +K + +EF E ++ ++ H NL+
Sbjct: 11 TDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 70
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ 126
+L+G +++ E+ G L D+L ++ ++ + +A + +EY+
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYLR---ECNRQEVSAVVLLYMATQISSAMEYLE- 126
Query: 127 YTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV 186
K ++HRD+ N L+ N K+ADFGL +L+ A A ++ + APE +
Sbjct: 127 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPESL 182
Query: 187 RDGCVTTKSDVYAFGVVLMELIT 209
+ KSDV+AFGV+L E+ T
Sbjct: 183 AYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 13/212 (6%)
Query: 3 SYNEVRDATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK--NTKSKEFSSELKIL 58
+Y++ ++ + K+G G YG VY G K A+K +K + +EF E ++
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 65
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
++ H NL++L+G +++ E+ G L D+L ++ + + +A
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR---ECNRQEVNAVVLLYMATQI 122
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGT 177
+ +EY+ K ++HRD+ N L+ N K+ADFGL +L+ A A ++
Sbjct: 123 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--P 177
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ APE + + KSDV+AFGV+L E+ T
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 103/196 (52%), Gaps = 25/196 (12%)
Query: 19 KIGQGSYGSVYLGKL-RGKNAAIKQMK--NTKSKEFSSELKILCKV-HSNLIELIGYAAG 74
K+G G +G V++ + A+K MK + + F +E ++ + H L++L
Sbjct: 189 KLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 248
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKGLEYIHQYTKPYYV 133
+ ++++ E+ G+L D L S +G K+PL + + A+G+ +I Q Y+
Sbjct: 249 -EPIYIITEFMAKGSLLDFLK--SDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN---YI 300
Query: 134 HRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTT 193
HRD++ +NIL+ ++ KIADFGL ++ P + APE + G T
Sbjct: 301 HRDLRAANILVSASLVCKIADFGLARVGAKFP------------IKWTAPEAINFGSFTI 348
Query: 194 KSDVYAFGVVLMELIT 209
KSDV++FG++LME++T
Sbjct: 349 KSDVWSFGILLMEIVT 364
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 21/217 (9%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRG-------KNAAIKQMKNTKSK----EFSSELKIL 58
A + S ++GQGS+G VY G +G AIK + S EF +E ++
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 59 CKVHSN-LIELIGYAAGGDSLFLVYEYAQNGALSDHLH--WPSVKGKK---PLAWTTRVQ 112
+ + + ++ L+G + G ++ E G L +L P ++ P + + +Q
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 129
Query: 113 IALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAAS 172
+A + A G+ Y++ +VHRD+ N + +F KI DFG+ + + + +
Sbjct: 130 MAGEIADGMAYLNANK---FVHRDLAARNCXVAEDFTVKIGDFGMTRDI-YETDYYRKGG 185
Query: 173 RIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ + +++PE ++DG TT SDV++FGVVL E+ T
Sbjct: 186 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 13/212 (6%)
Query: 3 SYNEVRDATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK--NTKSKEFSSELKIL 58
+Y++ ++ + K+G G YG VY G K A+K +K + +EF E ++
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
++ H NL++L+G +++ E+ G L D+L ++ + + +A
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR---ECNRQEVNAVVLLYMATQI 125
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGT 177
+ +EY+ K ++HRD+ N L+ N K+ADFGL +L+ A A ++
Sbjct: 126 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--P 180
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ APE + + KSDV+AFGV+L E+ T
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 25/214 (11%)
Query: 20 IGQGSYGSVYLGK-LR-GKNAAIKQMKNTKSKEFSSELKILCKV-------HSNLIELIG 70
+G G V+L + LR ++ A+K ++ +++ S L+ + H ++ +
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV-- 77
Query: 71 YAAG------GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYI 124
YA G G ++V EY L D +H + P+ +++ DA + L +
Sbjct: 78 YATGEAETPAGPLPYIVMEYVDGVTLRDIVHT-----EGPMTPKRAIEVIADACQALNFS 132
Query: 125 HQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
HQ +HRDVK +NI++ + K+ DFG+ + + S + ++GT YL+PE
Sbjct: 133 HQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 185 YVRDGCVTTKSDVYAFGVVLMELITGQQALSRDA 218
R V +SDVY+ G VL E++TG+ + D+
Sbjct: 190 QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 101/211 (47%), Gaps = 27/211 (12%)
Query: 9 DATSNFSTSLKIGQGSYGSVYLGK-LRGKNA-AIKQMK------NTKSKEFSSELKILCK 60
D FS +IG GS+G+VY + +R AIK+M N K ++ E++ L K
Sbjct: 12 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQK 71
Query: 61 V-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAK 119
+ H N I+ G + +LV EY G+ SD L KKPL + A +
Sbjct: 72 LRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLE----VHKKPLQEVEIAAVTHGALQ 126
Query: 120 GLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG 179
GL Y+H + +HRDVK NILL K+ DFG S I A A+ VGT
Sbjct: 127 GLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFG-------SASIMAPANXFVGTPY 176
Query: 180 YLAPEYV---RDGCVTTKSDVYAFGVVLMEL 207
++APE + +G K DV++ G+ +EL
Sbjct: 177 WMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 15/195 (7%)
Query: 19 KIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKE----FSSELKILCKV-HSNLIELIGY 71
+IG+G++G V+ G+LR N A+K + T + F E +IL + H N++ LIG
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 72 AAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPY 131
+++V E Q G D L + +G + L T +Q+ DAA G+EY+
Sbjct: 181 CTQKQPIYIVMELVQGG---DFLTFLRTEGAR-LRVKTLLQMVGDAAAGMEYLESKC--- 233
Query: 132 YVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCV 191
+HRD+ N L+ KI+DFG+ + A+ R V + APE + G
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQV-PVKWTAPEALNYGRY 292
Query: 192 TTKSDVYAFGVVLME 206
+++SDV++FG++L E
Sbjct: 293 SSESDVWSFGILLWE 307
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 105/195 (53%), Gaps = 13/195 (6%)
Query: 19 KIGQGSYGSVYLGKLRGK-NAAIKQMK--NTKSKEFSSELKILCKV-HSNLIELIGYAAG 74
++G G +G V LGK +G+ + A+K +K + EF E + + K+ H L++ G +
Sbjct: 15 ELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
+++V EY NG L ++L KG +P + +++ D +G+ ++ + ++H
Sbjct: 75 EYPIYIVTEYISNGCLLNYLR-SHGKGLEP---SQLLEMCYDVCEGMAFLESHQ---FIH 127
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RD+ N L+D + K++DFG+ + + +++ ++ + APE ++K
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKF--PVKWSAPEVFHYFKYSSK 185
Query: 195 SDVYAFGVVLMELIT 209
SDV+AFG+++ E+ +
Sbjct: 186 SDVWAFGILMWEVFS 200
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 8/144 (5%)
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
G ++V EY L D +H + P+ +++ DA + L + HQ +H
Sbjct: 88 GPLPYIVMEYVDGVTLRDIVHT-----EGPMTPKRAIEVIADACQALNFSHQNG---IIH 139
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RDVK +NI++ + K+ DFG+ + + S + ++GT YL+PE R V +
Sbjct: 140 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDAR 199
Query: 195 SDVYAFGVVLMELITGQQALSRDA 218
SDVY+ G VL E++TG+ + D+
Sbjct: 200 SDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 8/144 (5%)
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
G ++V EY L D +H + P+ +++ DA + L + HQ +H
Sbjct: 88 GPLPYIVMEYVDGVTLRDIVHT-----EGPMTPKRAIEVIADACQALNFSHQNG---IIH 139
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RDVK +NI++ + K+ DFG+ + + S + ++GT YL+PE R V +
Sbjct: 140 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDAR 199
Query: 195 SDVYAFGVVLMELITGQQALSRDA 218
SDVY+ G VL E++TG+ + D+
Sbjct: 200 SDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 8/144 (5%)
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
G ++V EY L D +H + P+ +++ DA + L + HQ +H
Sbjct: 88 GPLPYIVMEYVDGVTLRDIVHT-----EGPMTPKRAIEVIADACQALNFSHQNG---IIH 139
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RDVK +NI++ + K+ DFG+ + + S + ++GT YL+PE R V +
Sbjct: 140 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDAR 199
Query: 195 SDVYAFGVVLMELITGQQALSRDA 218
SDVY+ G VL E++TG+ + D+
Sbjct: 200 SDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 101/211 (47%), Gaps = 27/211 (12%)
Query: 9 DATSNFSTSLKIGQGSYGSVYLGK-LRGKNA-AIKQMK------NTKSKEFSSELKILCK 60
D FS +IG GS+G+VY + +R AIK+M N K ++ E++ L K
Sbjct: 51 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQK 110
Query: 61 V-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAK 119
+ H N I+ G + +LV EY G+ SD L KKPL + A +
Sbjct: 111 LRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLE----VHKKPLQEVEIAAVTHGALQ 165
Query: 120 GLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG 179
GL Y+H + +HRDVK NILL K+ DFG S I A A+ VGT
Sbjct: 166 GLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFG-------SASIMAPANXFVGTPY 215
Query: 180 YLAPEYV---RDGCVTTKSDVYAFGVVLMEL 207
++APE + +G K DV++ G+ +EL
Sbjct: 216 WMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 21/208 (10%)
Query: 19 KIGQGSYGSVYLGKLRG-------KNAAIKQMKNTKSK----EFSSELKILCKVHSN-LI 66
++GQGS+G VY G R A+K + + S EF +E ++ + ++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLH--WPSVK---GKKPLAWTTRVQIALDAAKGL 121
L+G + G +V E +G L +L P + G+ P +Q+A + A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 122 EYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYL 181
Y++ +VHRD+ N ++ +F KI DFG+ + + + ++ ++
Sbjct: 144 AYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLL-PVRWM 199
Query: 182 APEYVRDGCVTTKSDVYAFGVVLMELIT 209
APE ++DG TT SD+++FGVVL E+ +
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 21/208 (10%)
Query: 19 KIGQGSYGSVYLGKLRG-------KNAAIKQMKNTKSK----EFSSELKILCKVHSN-LI 66
++GQGS+G VY G R A+K + + S EF +E ++ + ++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLH--WPSVK---GKKPLAWTTRVQIALDAAKGL 121
L+G + G +V E +G L +L P + G+ P +Q+A + A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 122 EYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYL 181
Y++ +VHRD+ N ++ +F KI DFG+ + + + + + + ++
Sbjct: 144 AYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWM 199
Query: 182 APEYVRDGCVTTKSDVYAFGVVLMELIT 209
APE ++DG TT SD+++FGVVL E+ +
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 8/144 (5%)
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
G ++V EY L D +H + P+ +++ DA + L + HQ +H
Sbjct: 105 GPLPYIVMEYVDGVTLRDIVHT-----EGPMTPKRAIEVIADACQALNFSHQNG---IIH 156
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RDVK +NI++ + K+ DFG+ + + S + ++GT YL+PE R V +
Sbjct: 157 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDAR 216
Query: 195 SDVYAFGVVLMELITGQQALSRDA 218
SDVY+ G VL E++TG+ + D+
Sbjct: 217 SDVYSLGCVLYEVLTGEPPFTGDS 240
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 21/208 (10%)
Query: 19 KIGQGSYGSVYLGKLRG-------KNAAIKQMKNTKSK----EFSSELKILCKVHSN-LI 66
++GQGS+G VY G R A+K + + S EF +E ++ + ++
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLH--WPSVK---GKKPLAWTTRVQIALDAAKGL 121
L+G + G +V E +G L +L P + G+ P +Q+A + A G+
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 122 EYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYL 181
Y++ +VHRD+ N ++ +F KI DFG+ + + + ++ ++
Sbjct: 143 AYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLL-PVRWM 198
Query: 182 APEYVRDGCVTTKSDVYAFGVVLMELIT 209
APE ++DG TT SD+++FGVVL E+ +
Sbjct: 199 APESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 35/229 (15%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRG-------KNAAIKQMKNTKSKE----FSSELKILCK 60
+N IG+G++G V+ + G A+K +K S + F E ++ +
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 61 V-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLH-------------------WPSVK 100
+ N+++L+G A G + L++EY G L++ L S
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 101 GKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKL 160
G PL+ ++ IA A G+ Y+ + +VHRD+ T N L+ N KIADFGL +
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 161 LEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ +S + A ++ PE + TT+SDV+A+GVVL E+ +
Sbjct: 224 I-YSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 108/211 (51%), Gaps = 18/211 (8%)
Query: 7 VRDATSNFSTSLKIGQGSYGSVY--LGKLRGKNAAIKQM---KNTKSKEFSSELKILCK- 60
V D ++ KIGQG+ G+VY + G+ AI+QM + K + +E+ ++ +
Sbjct: 15 VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN 74
Query: 61 VHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
+ N++ + GD L++V EY G+L+D + + + A + + +
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA------VCRECLQA 128
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
LE++H +HRD+K+ NILL + K+ DFG + +PE + S +VGT +
Sbjct: 129 LEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQI--TPE-QSKRSEMVGTPYW 182
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQ 211
+APE V K D+++ G++ +E+I G+
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 99/196 (50%), Gaps = 13/196 (6%)
Query: 19 KIGQGSYGSVYLG--KLRGKNAAIKQMK--NTKSKEFSSELKILCKV-HSNLIELIGYAA 73
K+G G YG VY G K A+K +K + +EF E ++ ++ H NL++L+G
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 74 GGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYV 133
+++ E+ G L D+L ++ ++ + +A + +EY+ K ++
Sbjct: 287 REPPFYIITEFMTYGNLLDYLR---ECNRQEVSAVVLLYMATQISSAMEYLE---KKNFI 340
Query: 134 HRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTT 193
HR++ N L+ N K+ADFGL +L+ A A ++ + APE + +
Sbjct: 341 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSI 398
Query: 194 KSDVYAFGVVLMELIT 209
KSDV+AFGV+L E+ T
Sbjct: 399 KSDVWAFGVLLWEIAT 414
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 108/211 (51%), Gaps = 18/211 (8%)
Query: 7 VRDATSNFSTSLKIGQGSYGSVY--LGKLRGKNAAIKQM---KNTKSKEFSSELKILCK- 60
V D ++ KIGQG+ G+VY + G+ AI+QM + K + +E+ ++ +
Sbjct: 16 VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN 75
Query: 61 VHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
+ N++ + GD L++V EY G+L+D + + + A + + +
Sbjct: 76 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA------VCRECLQA 129
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
LE++H +HRD+K+ NILL + K+ DFG + +PE + S +VGT +
Sbjct: 130 LEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQI--TPE-QSKRSXMVGTPYW 183
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQ 211
+APE V K D+++ G++ +E+I G+
Sbjct: 184 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 103/206 (50%), Gaps = 14/206 (6%)
Query: 19 KIGQGSYGSVYLGKLRGK-NAAIKQMK--NTKSKEFSSELKILCKV-HSNLIELIGYAAG 74
++G G +G V GK RG+ + AIK +K + EF E K++ + H L++L G
Sbjct: 31 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
+F++ EY NG L ++L + + +++ D + +EY+ ++H
Sbjct: 91 QRPIFIITEYMANGCLLNYLR----EMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLH 143
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RD+ N L++ K++DFGL + + E ++ S+ + PE + ++K
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKF--PVRWSPPEVLMYSKFSSK 201
Query: 195 SDVYAFGVVLMELIT-GQQALSRDAN 219
SD++AFGV++ E+ + G+ R N
Sbjct: 202 SDIWAFGVLMWEIYSLGKMPYERFTN 227
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 33/235 (14%)
Query: 22 QGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV---HSNLIELIGYAAGGDSL 78
+G +G V+ +L A+K + + SE +I H NL++ I G +L
Sbjct: 25 RGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNL 84
Query: 79 ----FLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT------ 128
+L+ + G+L+D+L KG + W +A ++GL Y+H+
Sbjct: 85 EVELWLITAFHDKGSLTDYL-----KGNI-ITWNELCHVAETMSRGLSYLHEDVPWCRGE 138
Query: 129 --KPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV 186
KP HRD K+ N+LL S+ A +ADFGL E + VGT Y+APE V
Sbjct: 139 GHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQ-VGTRRYMAPE-V 196
Query: 187 RDGCVT------TKSDVYAFGVVLMELITGQQALSRDAN----PGNNQYTEHRSL 231
+G + + D+YA G+VL EL++ +A + P + +H SL
Sbjct: 197 LEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEIGQHPSL 251
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 108/211 (51%), Gaps = 18/211 (8%)
Query: 7 VRDATSNFSTSLKIGQGSYGSVY--LGKLRGKNAAIKQM---KNTKSKEFSSELKILCK- 60
V D ++ KIGQG+ G+VY + G+ AI+QM + K + +E+ ++ +
Sbjct: 15 VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN 74
Query: 61 VHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
+ N++ + GD L++V EY G+L+D + + + A + + +
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA------VCRECLQA 128
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
LE++H +HRD+K+ NILL + K+ DFG + +PE + S +VGT +
Sbjct: 129 LEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQI--TPE-QSKRSXMVGTPYW 182
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQ 211
+APE V K D+++ G++ +E+I G+
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 108/211 (51%), Gaps = 18/211 (8%)
Query: 7 VRDATSNFSTSLKIGQGSYGSVY--LGKLRGKNAAIKQM---KNTKSKEFSSELKILCK- 60
V D ++ KIGQG+ G+VY + G+ AI+QM + K + +E+ ++ +
Sbjct: 15 VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN 74
Query: 61 VHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
+ N++ + GD L++V EY G+L+D + + + A + + +
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA------VCRECLQA 128
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
LE++H +HRD+K+ NILL + K+ DFG + +PE + S +VGT +
Sbjct: 129 LEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQI--TPE-QSKRSTMVGTPYW 182
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQ 211
+APE V K D+++ G++ +E+I G+
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 25/207 (12%)
Query: 20 IGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV---HSNLIELIGYAA--- 73
+G+G YG V+ G G++ A+K + + + E +I V H N++ I
Sbjct: 16 VGKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTSR 75
Query: 74 -GGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIH-----QY 127
L+L+ Y ++G+L D L ++ L +++A+ AA GL ++H
Sbjct: 76 NSSTQLWLITHYHEHGSLYDFLQ------RQTLEPHLALRLAVSAACGLAHLHVEIFGTQ 129
Query: 128 TKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPE-IAAAASRIVGTFGYLAPEY- 185
KP HRD K+ N+L+ SN + IAD GL + + + + VGT Y+APE
Sbjct: 130 GKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVL 189
Query: 186 ---VRDGCVTTK--SDVYAFGVVLMEL 207
+R C + +D++AFG+VL E+
Sbjct: 190 DEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 100/195 (51%), Gaps = 13/195 (6%)
Query: 19 KIGQGSYGSVYLGKLRGKN-AAIKQMKNTKSKE--FSSELKILCKV-HSNLIELIGYAAG 74
+IG G +G V+LG K+ AIK +K E F E +++ K+ H L++L G
Sbjct: 34 EIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
+ LV+E+ ++G LSD+L + A T + + LD +G+ Y+ + +H
Sbjct: 94 QAPICLVFEFMEHGCLSDYLR----TQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 146
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RD+ N L+ N K++DFG+ + + ++ ++ + +PE ++K
Sbjct: 147 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF--PVKWASPEVFSFSRYSSK 204
Query: 195 SDVYAFGVVLMELIT 209
SDV++FGV++ E+ +
Sbjct: 205 SDVWSFGVLMWEVFS 219
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 21/208 (10%)
Query: 19 KIGQGSYGSVYLGKLRG-------KNAAIKQMKNTKSK----EFSSELKILCKVHSN-LI 66
++GQGS+G VY G R A+K + + S EF +E ++ + ++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLH--WPSVK---GKKPLAWTTRVQIALDAAKGL 121
L+G + G +V E +G L +L P + G+ P +Q+A + A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 122 EYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYL 181
Y++ +VHR++ N ++ +F KI DFG+ + + + + + + ++
Sbjct: 144 AYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWM 199
Query: 182 APEYVRDGCVTTKSDVYAFGVVLMELIT 209
APE ++DG TT SD+++FGVVL E+ +
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 34/218 (15%)
Query: 20 IGQGSYGSVYLGKLRGKN---------AAIKQMKNTKSK----EFSSELKILCKV--HSN 64
+G+G++G V L + G + A+K +K+ ++ + SE++++ + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHW-----------PSVKGKKPLAWTTRVQI 113
+I L+G L+++ EYA G L ++L PS ++ L+ V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
A A+G+EY+ +HRD+ N+L+ + KIADFGL + + H I
Sbjct: 156 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHH---IDXXKKT 209
Query: 174 IVGTFG--YLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
G ++APE + D T +SDV++FGV+L E+ T
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 105/212 (49%), Gaps = 13/212 (6%)
Query: 3 SYNEVRDATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK--NTKSKEFSSELKIL 58
+Y++ ++ + K+G G YG VY G K A+K +K + +EF E ++
Sbjct: 208 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 267
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
++ H NL++L+G +++ E+ G L D+L ++ + + +A
Sbjct: 268 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR---ECNRQEVNAVVLLYMATQI 324
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGT 177
+ +EY+ K ++HR++ N L+ N K+ADFGL +L+ A A ++
Sbjct: 325 SSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--P 379
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ APE + + KSDV+AFGV+L E+ T
Sbjct: 380 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 25/207 (12%)
Query: 14 FSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKIL-CKVHSNLIELIGYA 72
F ++K+ G V + K + + + F E+K++ C H N+++ IG
Sbjct: 23 FGQAIKVTHRETGEVMVMK------ELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
L + EY + G L + S+ + P W+ RV A D A G+ Y+H
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIK--SMDSQYP--WSQRVSFAKDIASGMAYLHSMN---I 129
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLL---EHSPEIAAAASR--------IVGTFGYL 181
+HRD+ + N L+ N +ADFGL +L+ + PE + + +VG ++
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 182 APEYVRDGCVTTKSDVYAFGVVLMELI 208
APE + K DV++FG+VL E+I
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 21/208 (10%)
Query: 19 KIGQGSYGSVYLGKLRG-------KNAAIKQMKNTKSK----EFSSELKILCKVHSN-LI 66
++GQGS+G VY G R A+K + + S EF +E ++ + ++
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLH--WPSVK---GKKPLAWTTRVQIALDAAKGL 121
L+G + G +V E +G L +L P + G+ P +Q+A + A G+
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 122 EYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYL 181
Y++ +VHR++ N ++ +F KI DFG+ + + + + + + ++
Sbjct: 145 AYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWM 200
Query: 182 APEYVRDGCVTTKSDVYAFGVVLMELIT 209
APE ++DG TT SD+++FGVVL E+ +
Sbjct: 201 APESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 105/212 (49%), Gaps = 13/212 (6%)
Query: 3 SYNEVRDATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK--NTKSKEFSSELKIL 58
+Y++ ++ + K+G G YG VY G K A+K +K + +EF E ++
Sbjct: 250 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 309
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
++ H NL++L+G +++ E+ G L D+L ++ + + +A
Sbjct: 310 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR---ECNRQEVNAVVLLYMATQI 366
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGT 177
+ +EY+ K ++HR++ N L+ N K+ADFGL +L+ A A ++
Sbjct: 367 SSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--P 421
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ APE + + KSDV+AFGV+L E+ T
Sbjct: 422 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 102/195 (52%), Gaps = 13/195 (6%)
Query: 19 KIGQGSYGSVYLGKLRGKN-AAIKQMKN--TKSKEFSSELKILCKV-HSNLIELIGYAAG 74
+IG G +G V+LG K+ AIK ++ ++F E +++ K+ H L++L G
Sbjct: 14 EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
+ LV+E+ ++G LSD+L + A T + + LD +G+ Y+ + + +H
Sbjct: 74 QAPICLVFEFMEHGCLSDYLR----TQRGLFAAETLLGMCLDVCEGMAYLEEAS---VIH 126
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RD+ N L+ N K++DFG+ + + ++ ++ + +PE ++K
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF--PVKWASPEVFSFSRYSSK 184
Query: 195 SDVYAFGVVLMELIT 209
SDV++FGV++ E+ +
Sbjct: 185 SDVWSFGVLMWEVFS 199
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 101/195 (51%), Gaps = 13/195 (6%)
Query: 19 KIGQGSYGSVYLGKLRGKN-AAIKQMKN--TKSKEFSSELKILCKV-HSNLIELIGYAAG 74
+IG G +G V+LG K+ AIK ++ ++F E +++ K+ H L++L G
Sbjct: 12 EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
+ LV+E+ ++G LSD+L + A T + + LD +G+ Y+ + +H
Sbjct: 72 QAPICLVFEFMEHGCLSDYLR----TQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 124
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RD+ N L+ N K++DFG+ + + ++ ++ + +PE ++K
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF--PVKWASPEVFSFSRYSSK 182
Query: 195 SDVYAFGVVLMELIT 209
SDV++FGV++ E+ +
Sbjct: 183 SDVWSFGVLMWEVFS 197
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 19/202 (9%)
Query: 20 IGQGSYGSVYLG--KLRGKN---AAIKQMKN----TKSKEFSSELKILCKV-HSNLIELI 69
IG G +G V G KL GK AIK +K+ + ++F SE I+ + H N+I L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTK 129
G + ++ E+ +NG+L L + V + A G++Y+
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFLR----QNDGQFTVIQLVGMLRGIAAGMKYLADMN- 129
Query: 130 PYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG--YLAPEYVR 187
YVHR + NIL++SN K++DFGL + LE S + G + APE ++
Sbjct: 130 --YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 187
Query: 188 DGCVTTKSDVYAFGVVLMELIT 209
T+ SDV+++G+V+ E+++
Sbjct: 188 YRKFTSASDVWSYGIVMWEVMS 209
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 101/195 (51%), Gaps = 13/195 (6%)
Query: 19 KIGQGSYGSVYLGKLRGKN-AAIKQMKN--TKSKEFSSELKILCKV-HSNLIELIGYAAG 74
+IG G +G V+LG K+ AIK ++ ++F E +++ K+ H L++L G
Sbjct: 17 EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
+ LV+E+ ++G LSD+L + A T + + LD +G+ Y+ + +H
Sbjct: 77 QAPICLVFEFMEHGCLSDYLR----TQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 129
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RD+ N L+ N K++DFG+ + + ++ ++ + +PE ++K
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF--PVKWASPEVFSFSRYSSK 187
Query: 195 SDVYAFGVVLMELIT 209
SDV++FGV++ E+ +
Sbjct: 188 SDVWSFGVLMWEVFS 202
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 101/195 (51%), Gaps = 13/195 (6%)
Query: 19 KIGQGSYGSVYLGKLRGKN-AAIKQMKN--TKSKEFSSELKILCKV-HSNLIELIGYAAG 74
+IG G +G V+LG K+ AIK ++ ++F E +++ K+ H L++L G
Sbjct: 14 EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
+ LV+E+ ++G LSD+L + A T + + LD +G+ Y+ + +H
Sbjct: 74 QAPICLVFEFMEHGCLSDYLR----TQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 126
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RD+ N L+ N K++DFG+ + + ++ ++ + +PE ++K
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF--PVKWASPEVFSFSRYSSK 184
Query: 195 SDVYAFGVVLMELIT 209
SDV++FGV++ E+ +
Sbjct: 185 SDVWSFGVLMWEVFS 199
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 27/231 (11%)
Query: 7 VRDATSNFSTSLKIGQGSYGSVYLGK--LRGKNAAIKQMKNT--KSKEFSSELKILCKV- 61
+RD F +G G+YG VY G+ G+ AAIK M T + +E E+ +L K
Sbjct: 19 LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS 78
Query: 62 -HSNLIELIGY------AAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIA 114
H N+ G D L+LV E+ G+++D + + KG L I
Sbjct: 79 HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIK--NTKGNT-LKEEWIAYIC 135
Query: 115 LDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+ +GL ++HQ+ +HRD+K N+LL N K+ DFG+ L+ + +
Sbjct: 136 REILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT---VGRRNTF 189
Query: 175 VGTFGYLAPEYV-----RDGCVTTKSDVYAFGVVLMELITGQQALSRDANP 220
+GT ++APE + D KSD+++ G+ +E+ G L D +P
Sbjct: 190 IGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLC-DMHP 239
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 9 DATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQM---KNTKSKEFSSELKILCKV-H 62
D S +KIG+GS G V + +R GK A+K+M K + + +E+ I+ H
Sbjct: 26 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH 85
Query: 63 SNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLE 122
N++E+ GD L++V E+ + GAL+D + + ++ A + L + L
Sbjct: 86 ENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALS 139
Query: 123 YIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLA 182
+H +HRD+K+ +ILL + R K++DFG + S E+ +VGT ++A
Sbjct: 140 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKX-LVGTPYWMA 193
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQ 211
PE + + D+++ G++++E++ G+
Sbjct: 194 PELISRLPYGPEVDIWSLGIMVIEMVDGE 222
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 9 DATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQM---KNTKSKEFSSELKILCKV-H 62
D S +KIG+GS G V + +R GK A+K+M K + + +E+ I+ H
Sbjct: 17 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH 76
Query: 63 SNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLE 122
N++E+ GD L++V E+ + GAL+D + + ++ A + L + L
Sbjct: 77 ENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALS 130
Query: 123 YIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLA 182
+H +HRD+K+ +ILL + R K++DFG + S E+ +VGT ++A
Sbjct: 131 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKX-LVGTPYWMA 184
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQ 211
PE + + D+++ G++++E++ G+
Sbjct: 185 PELISRLPYGPEVDIWSLGIMVIEMVDGE 213
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 139/326 (42%), Gaps = 64/326 (19%)
Query: 20 IGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSE---LKILCKVHSNLIELI-----GY 71
IG+G YG+VY G L + A+K + F +E ++ H N+ I
Sbjct: 21 IGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVT 80
Query: 72 AAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIH------ 125
A G LV EY NG+L +L + W + ++A +GL Y+H
Sbjct: 81 ADGRMEYLLVMEYYPNGSLXKYLSLHTSD------WVSSCRLAHSVTRGLAYLHTELPRG 134
Query: 126 QYTKPYYVHRDVKTSNILLDSNFRAKIADFGLV------KLLEHSPEIAAAASRIVGTFG 179
+ KP HRD+ + N+L+ ++ I+DFGL +L+ E AA S VGT
Sbjct: 135 DHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE-VGTIR 193
Query: 180 YLAPEYVRDGCVTTKS--------DVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSL 231
Y+APE V +G V + D+YA G++ E+ D PG S+
Sbjct: 194 YMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIFMR----CTDLFPGE-------SV 241
Query: 232 VDYMLA---------VFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLS---KDCVDEN 279
+Y +A F D + +++ E P K++ L + L +DC D++
Sbjct: 242 PEYQMAFQTEVGNHPTFEDMQVLVSR--EKQRPKFPEAWKENSLAVRSLKETIEDCWDQD 299
Query: 280 WKRRPDMSNAAIRLSHILISSKEWEK 305
+ R A R++ +++ WE+
Sbjct: 300 AEARLTAQXAEERMAELMMI---WER 322
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 9 DATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQM---KNTKSKEFSSELKILCKV-H 62
D S +KIG+GS G V + +R GK A+K+M K + + +E+ I+ H
Sbjct: 28 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH 87
Query: 63 SNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLE 122
N++E+ GD L++V E+ + GAL+D + + ++ A + L + L
Sbjct: 88 ENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALS 141
Query: 123 YIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLA 182
+H +HRD+K+ +ILL + R K++DFG + S E+ +VGT ++A
Sbjct: 142 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKX-LVGTPYWMA 195
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQ 211
PE + + D+++ G++++E++ G+
Sbjct: 196 PELISRLPYGPEVDIWSLGIMVIEMVDGE 224
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 109/211 (51%), Gaps = 18/211 (8%)
Query: 7 VRDATSNFSTSLKIGQGSYGSVY--LGKLRGKNAAIKQM---KNTKSKEFSSELKILCK- 60
V D ++ KIGQG+ G+VY + G+ AI+QM + K + +E+ ++ +
Sbjct: 16 VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN 75
Query: 61 VHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
+ N++ + GD L++V EY G+L+D + + + +A R + +
Sbjct: 76 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCR-----ECLQA 129
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
LE++H +HR++K+ NILL + K+ DFG + +PE + S +VGT +
Sbjct: 130 LEFLHSNQ---VIHRNIKSDNILLGMDGSVKLTDFGFCAQI--TPE-QSKRSTMVGTPYW 183
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQ 211
+APE V K D+++ G++ +E+I G+
Sbjct: 184 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 9 DATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQM---KNTKSKEFSSELKILCKV-H 62
D S +KIG+GS G V + +R GK A+K+M K + + +E+ I+ H
Sbjct: 21 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH 80
Query: 63 SNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLE 122
N++E+ GD L++V E+ + GAL+D + + ++ A + L + L
Sbjct: 81 ENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALS 134
Query: 123 YIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLA 182
+H +HRD+K+ +ILL + R K++DFG + S E+ +VGT ++A
Sbjct: 135 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKX-LVGTPYWMA 188
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQ 211
PE + + D+++ G++++E++ G+
Sbjct: 189 PELISRLPYGPEVDIWSLGIMVIEMVDGE 217
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 20 IGQGSYGSVYLGKLRG---------KNAAIKQMKNTKSK----EFSSELKILCKV--HSN 64
+G+G++G V L + G A+K +K+ ++ + SE++++ + H N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHW-----------PSVKGKKPLAWTTRVQI 113
+I L+G L+++ EYA G L ++L PS ++ L+ V
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
A A+G+EY+ +HRD+ N+L+ + KIADFGL + + H +
Sbjct: 149 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 174 IVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ ++APE + D T +SDV++FGV+L E+ T
Sbjct: 206 RL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 30/216 (13%)
Query: 20 IGQGSYGSVYLGKLRGKN---------AAIKQMKNTKSK----EFSSELKILCKV--HSN 64
+G+G++G V L + G + A+K +K+ ++ + SE++++ + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHW-----------PSVKGKKPLAWTTRVQI 113
+I L+G L+++ EYA G L ++L PS ++ L+ V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
A A+G+EY+ +HRD+ N+L+ + KIADFGL + + H +
Sbjct: 156 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 174 IVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ ++APE + D T +SDV++FGV+L E+ T
Sbjct: 213 RL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 20 IGQGSYGSVYLGKLRG---------KNAAIKQMKNTKSK----EFSSELKILCKV--HSN 64
+G+G++G V L + G A+K +K+ ++ + SE++++ + H N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHW-----------PSVKGKKPLAWTTRVQI 113
+I L+G L+++ EYA G L ++L PS ++ L+ V
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
A A+G+EY+ +HRD+ N+L+ + KIADFGL + + H +
Sbjct: 141 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 174 IVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ ++APE + D T +SDV++FGV+L E+ T
Sbjct: 198 RL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 20 IGQGSYGSVYLGKLRG---------KNAAIKQMKNTKSK----EFSSELKILCKV--HSN 64
+G+G++G V L + G A+K +K+ ++ + SE++++ + H N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHW-----------PSVKGKKPLAWTTRVQI 113
+I L+G L+++ EYA G L ++L PS ++ L+ V
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
A A+G+EY+ +HRD+ N+L+ + KIADFGL + + H +
Sbjct: 145 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 174 IVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ ++APE + D T +SDV++FGV+L E+ T
Sbjct: 202 RL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 27/209 (12%)
Query: 19 KIGQGSYGSVYLGKLR--GKNAAIKQ-----MKNTKSKEFSSELKILCKV-HSNLIELIG 70
KIG+GS+G L K G+ IK+ M + + +E E+ +L + H N+++
Sbjct: 31 KIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRE 90
Query: 71 YAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-----KKPLAWTTRVQIALDAAKGLEYIH 125
SL++V +Y + G L ++ + KG + L W VQI L L+++H
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRIN--AQKGVLFQEDQILDWF--VQICL----ALKHVH 142
Query: 126 QYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEY 185
+HRD+K+ NI L + ++ DFG+ ++L + E+A A +GT YL+PE
Sbjct: 143 DRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARAC---IGTPYYLSPEI 196
Query: 186 VRDGCVTTKSDVYAFGVVLMELITGQQAL 214
+ KSD++A G VL EL T + A
Sbjct: 197 CENKPYNNKSDIWALGCVLYELCTLKHAF 225
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 20 IGQGSYGSVYLGKLRG---------KNAAIKQMKNTKSK----EFSSELKILCKV--HSN 64
+G+G++G V L + G A+K +K+ ++ + SE++++ + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHW-----------PSVKGKKPLAWTTRVQI 113
+I L+G L+++ EYA G L ++L PS ++ L+ V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
A A+G+EY+ +HRD+ N+L+ + KIADFGL + + H +
Sbjct: 156 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 174 IVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ ++APE + D T +SDV++FGV+L E+ T
Sbjct: 213 RL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 20 IGQGSYGSVYLGKLRG---------KNAAIKQMKNTKSK----EFSSELKILCKV--HSN 64
+G+G++G V L + G A+K +K+ ++ + SE++++ + H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHW-----------PSVKGKKPLAWTTRVQI 113
+I L+G L+++ EYA G L ++L PS ++ L+ V
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
A A+G+EY+ +HRD+ N+L+ + KIADFGL + + H +
Sbjct: 156 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 174 IVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ ++APE + D T +SDV++FGV+L E+ T
Sbjct: 213 RL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 102/206 (49%), Gaps = 14/206 (6%)
Query: 19 KIGQGSYGSVYLGKLRGK-NAAIKQMK--NTKSKEFSSELKILCKV-HSNLIELIGYAAG 74
++G G +G V GK RG+ + AIK +K + EF E K++ + H L++L G
Sbjct: 16 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
+F++ EY NG L ++L + + +++ D + +EY+ ++H
Sbjct: 76 QRPIFIITEYMANGCLLNYLR----EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLH 128
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RD+ N L++ K++DFGL + + ++ S+ + PE + ++K
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF--PVRWSPPEVLMYSKFSSK 186
Query: 195 SDVYAFGVVLMELIT-GQQALSRDAN 219
SD++AFGV++ E+ + G+ R N
Sbjct: 187 SDIWAFGVLMWEIYSLGKMPYERFTN 212
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 102/206 (49%), Gaps = 14/206 (6%)
Query: 19 KIGQGSYGSVYLGKLRGK-NAAIKQMK--NTKSKEFSSELKILCKV-HSNLIELIGYAAG 74
++G G +G V GK RG+ + AIK +K + EF E K++ + H L++L G
Sbjct: 15 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
+F++ EY NG L ++L + + +++ D + +EY+ ++H
Sbjct: 75 QRPIFIITEYMANGCLLNYLR----EMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLH 127
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RD+ N L++ K++DFGL + + ++ S+ + PE + ++K
Sbjct: 128 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF--PVRWSPPEVLMYSKFSSK 185
Query: 195 SDVYAFGVVLMELIT-GQQALSRDAN 219
SD++AFGV++ E+ + G+ R N
Sbjct: 186 SDIWAFGVLMWEIYSLGKMPYERFTN 211
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 102/206 (49%), Gaps = 14/206 (6%)
Query: 19 KIGQGSYGSVYLGKLRGK-NAAIKQMK--NTKSKEFSSELKILCKV-HSNLIELIGYAAG 74
++G G +G V GK RG+ + AIK +K + EF E K++ + H L++L G
Sbjct: 11 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
+F++ EY NG L ++L + + +++ D + +EY+ ++H
Sbjct: 71 QRPIFIITEYMANGCLLNYLR----EMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLH 123
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RD+ N L++ K++DFGL + + ++ S+ + PE + ++K
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF--PVRWSPPEVLMYSKFSSK 181
Query: 195 SDVYAFGVVLMELIT-GQQALSRDAN 219
SD++AFGV++ E+ + G+ R N
Sbjct: 182 SDIWAFGVLMWEIYSLGKMPYERFTN 207
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 108/212 (50%), Gaps = 24/212 (11%)
Query: 9 DATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQM---KNTKSKEFSSELKILCKV-H 62
D S +KIG+GS G V + +R GK A+K+M K + + +E+ I+ H
Sbjct: 71 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH 130
Query: 63 SNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLE 122
N++E+ GD L++V E+ + GAL+D + + ++ A + L + L
Sbjct: 131 ENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALS 184
Query: 123 YIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR---IVGTFG 179
+H +HRD+K+ +ILL + R K++DFG +++ R +VGT
Sbjct: 185 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCA------QVSKEVPRRKXLVGTPY 235
Query: 180 YLAPEYVRDGCVTTKSDVYAFGVVLMELITGQ 211
++APE + + D+++ G++++E++ G+
Sbjct: 236 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 267
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 20 IGQGSYGSVYLGKLRG---------KNAAIKQMKNTKSK----EFSSELKILCKV--HSN 64
+G+G++G V L + G A+K +K+ ++ + SE++++ + H N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHW-----------PSVKGKKPLAWTTRVQI 113
+I L+G L+++ EYA G L ++L PS ++ L+ V
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
A A+G+EY+ +HRD+ N+L+ + KIADFGL + + H +
Sbjct: 148 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 174 IVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ ++APE + D T +SDV++FGV+L E+ T
Sbjct: 205 RL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 109/218 (50%), Gaps = 36/218 (16%)
Query: 9 DATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQM---KNTKSKEFSSELKILCKV-H 62
D S +KIG+GS G V + +R GK A+K+M K + + +E+ I+ H
Sbjct: 148 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH 207
Query: 63 SNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRV---QIA---LD 116
N++E+ GD L++V E+ + GAL+D + TR+ QIA L
Sbjct: 208 ENVVEMYNSYLVGDELWVVMEFLEGGALTD------------IVTHTRMNEEQIAAVCLA 255
Query: 117 AAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR--- 173
+ L +H +HRD+K+ +ILL + R K++DFG +++ R
Sbjct: 256 VLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCA------QVSKEVPRRKX 306
Query: 174 IVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQ 211
+VGT ++APE + + D+++ G++++E++ G+
Sbjct: 307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 344
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 20 IGQGSYGSVYLGKLRG---------KNAAIKQMKNTKSK----EFSSELKILCKV--HSN 64
+G+G++G V L + G A+K +K+ ++ + SE++++ + H N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHW-----------PSVKGKKPLAWTTRVQI 113
+I L+G L+++ EYA G L ++L PS ++ L+ V
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
A A+G+EY+ +HRD+ N+L+ + KIADFGL + + H +
Sbjct: 197 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 174 IVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ ++APE + D T +SDV++FGV+L E+ T
Sbjct: 254 RL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 102/206 (49%), Gaps = 14/206 (6%)
Query: 19 KIGQGSYGSVYLGKLRGK-NAAIKQMK--NTKSKEFSSELKILCKV-HSNLIELIGYAAG 74
++G G +G V GK RG+ + AIK +K + EF E K++ + H L++L G
Sbjct: 22 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
+F++ EY NG L ++L + + +++ D + +EY+ ++H
Sbjct: 82 QRPIFIITEYMANGCLLNYLR----EMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLH 134
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RD+ N L++ K++DFGL + + ++ S+ + PE + ++K
Sbjct: 135 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF--PVRWSPPEVLMYSKFSSK 192
Query: 195 SDVYAFGVVLMELIT-GQQALSRDAN 219
SD++AFGV++ E+ + G+ R N
Sbjct: 193 SDIWAFGVLMWEIYSLGKMPYERFTN 218
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 102/206 (49%), Gaps = 14/206 (6%)
Query: 19 KIGQGSYGSVYLGKLRGK-NAAIKQMK--NTKSKEFSSELKILCKV-HSNLIELIGYAAG 74
++G G +G V GK RG+ + AIK +K + EF E K++ + H L++L G
Sbjct: 16 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
+F++ EY NG L ++L + + +++ D + +EY+ ++H
Sbjct: 76 QRPIFIITEYMANGCLLNYLR----EMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLH 128
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RD+ N L++ K++DFGL + + ++ S+ + PE + ++K
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKF--PVRWSPPEVLMYSKFSSK 186
Query: 195 SDVYAFGVVLMELIT-GQQALSRDAN 219
SD++AFGV++ E+ + G+ R N
Sbjct: 187 SDIWAFGVLMWEIYSLGKMPYERFTN 212
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 114/263 (43%), Gaps = 30/263 (11%)
Query: 9 DATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQM----KNTKSKEFSSELKILCKVH 62
D F+ KIG+GS+G V+ G K AIK + + ++ E+ +L +
Sbjct: 19 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD 78
Query: 63 SNLI-ELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGL 121
S + + G L+++ EY G+ D L PL T I + KGL
Sbjct: 79 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE------PGPLDETQIATILREILKGL 132
Query: 122 EYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYL 181
+Y+H K +HRD+K +N+LL + K+ADFG+ L + + VGT ++
Sbjct: 133 DYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLT---DTQIKRNXFVGTPFWM 186
Query: 182 APEYVRDGCVTTKSDVYAFGVVLMELITGQQALSR-----------DANPGNNQYTEHRS 230
APE ++ +K+D+++ G+ +EL G+ S NP + +
Sbjct: 187 APEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP 246
Query: 231 LVDYMLAVFNDTKDFMAKLTECL 253
L +++ A N F E L
Sbjct: 247 LKEFVEACLNKEPSFRPTAKELL 269
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 102/206 (49%), Gaps = 14/206 (6%)
Query: 19 KIGQGSYGSVYLGKLRGK-NAAIKQMK--NTKSKEFSSELKILCKV-HSNLIELIGYAAG 74
++G G +G V GK RG+ + AIK +K + EF E K++ + H L++L G
Sbjct: 31 ELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
+F++ EY NG L ++L + + +++ D + +EY+ ++H
Sbjct: 91 QRPIFIITEYMANGCLLNYLR----EMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLH 143
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RD+ N L++ K++DFGL + + ++ S+ + PE + ++K
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF--PVRWSPPEVLMYSKFSSK 201
Query: 195 SDVYAFGVVLMELIT-GQQALSRDAN 219
SD++AFGV++ E+ + G+ R N
Sbjct: 202 SDIWAFGVLMWEIYSLGKMPYERFTN 227
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 114/263 (43%), Gaps = 30/263 (11%)
Query: 9 DATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQM----KNTKSKEFSSELKILCKVH 62
D F+ KIG+GS+G V+ G K AIK + + ++ E+ +L +
Sbjct: 4 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD 63
Query: 63 SNLI-ELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGL 121
S + + G L+++ EY G+ D L PL T I + KGL
Sbjct: 64 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE------PGPLDETQIATILREILKGL 117
Query: 122 EYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYL 181
+Y+H K +HRD+K +N+LL + K+ADFG+ L + + VGT ++
Sbjct: 118 DYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDT---QIKRNXFVGTPFWM 171
Query: 182 APEYVRDGCVTTKSDVYAFGVVLMELITGQQALSR-----------DANPGNNQYTEHRS 230
APE ++ +K+D+++ G+ +EL G+ S NP + +
Sbjct: 172 APEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP 231
Query: 231 LVDYMLAVFNDTKDFMAKLTECL 253
L +++ A N F E L
Sbjct: 232 LKEFVEACLNKEPSFRPTAKELL 254
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 116/268 (43%), Gaps = 30/268 (11%)
Query: 4 YNEVRDATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQM----KNTKSKEFSSELKI 57
Y + D F+ KIG+GS+G V+ G K AIK + + ++ E+ +
Sbjct: 19 YFQSMDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITV 78
Query: 58 LCKVHSNLI-ELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALD 116
L + S + + G L+++ EY G+ D L PL T I +
Sbjct: 79 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE------PGPLDETQIATILRE 132
Query: 117 AAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVG 176
KGL+Y+H K +HRD+K +N+LL + K+ADFG+ L + + VG
Sbjct: 133 ILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDT---QIKRNTFVG 186
Query: 177 TFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQA-----------LSRDANPGNNQY 225
T ++APE ++ +K+D+++ G+ +EL G+ L NP +
Sbjct: 187 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG 246
Query: 226 TEHRSLVDYMLAVFNDTKDFMAKLTECL 253
+ L +++ A N F E L
Sbjct: 247 NYSKPLKEFVEACLNKEPSFRPTAKELL 274
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 114/263 (43%), Gaps = 30/263 (11%)
Query: 9 DATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQM----KNTKSKEFSSELKILCKVH 62
D F+ KIG+GS+G V+ G K AIK + + ++ E+ +L +
Sbjct: 4 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD 63
Query: 63 SNLI-ELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGL 121
S + + G L+++ EY G+ D L PL T I + KGL
Sbjct: 64 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE------PGPLDETQIATILREILKGL 117
Query: 122 EYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYL 181
+Y+H K +HRD+K +N+LL + K+ADFG+ L + + VGT ++
Sbjct: 118 DYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDT---QIKRNTFVGTPFWM 171
Query: 182 APEYVRDGCVTTKSDVYAFGVVLMELITGQQALSR-----------DANPGNNQYTEHRS 230
APE ++ +K+D+++ G+ +EL G+ S NP + +
Sbjct: 172 APEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP 231
Query: 231 LVDYMLAVFNDTKDFMAKLTECL 253
L +++ A N F E L
Sbjct: 232 LKEFVEACLNKEPSFRPTAKELL 254
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 100/195 (51%), Gaps = 13/195 (6%)
Query: 19 KIGQGSYGSVYLGKLRGKN-AAIKQMKN--TKSKEFSSELKILCKV-HSNLIELIGYAAG 74
+IG G +G V+LG K+ AIK ++ ++F E +++ K+ H L++L G
Sbjct: 15 EIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
+ LV E+ ++G LSD+L + A T + + LD +G+ Y+ + +H
Sbjct: 75 QAPICLVTEFMEHGCLSDYLR----TQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 127
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTK 194
RD+ N L+ N K++DFG+ + + ++ ++ + +PE ++K
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF--PVKWASPEVFSFSRYSSK 185
Query: 195 SDVYAFGVVLMELIT 209
SDV++FGV++ E+ +
Sbjct: 186 SDVWSFGVLMWEVFS 200
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 130/280 (46%), Gaps = 45/280 (16%)
Query: 18 LKIGQGSYGSVYLGKLR--GKNAAIKQM---KNTKSKEFSSELKILCKV-HSNLIELIGY 71
+KIG+GS G V L + + G+ A+K M K + + +E+ I+ H N++E+
Sbjct: 51 VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKS 110
Query: 72 AAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPY 131
G+ L+++ E+ Q GAL+D + + ++ T + L A L Y+H
Sbjct: 111 YLVGEELWVLMEFLQGGALTDIVSQVRLNEEQ---IATVCEAVLQA---LAYLHAQG--- 161
Query: 132 YVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCV 191
+HRD+K+ +ILL + R K++DFG + +VGT ++APE +
Sbjct: 162 VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD---VPKRKXLVGTPYWMAPEVISRSLY 218
Query: 192 TTKSDVYAFGVVLMELITGQ---------QALS--RDANPG--NNQYTEHRSLVDYM-LA 237
T+ D+++ G++++E++ G+ QA+ RD+ P N + L D++
Sbjct: 219 ATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERM 278
Query: 238 VFNDTKD-------------FMAKLTECLDPNLTRYHKDS 264
+ D ++ L ECL P + Y K +
Sbjct: 279 LVRDPQERATAQELLDHPFLLQTGLPECLVPLIQLYRKQT 318
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 29/214 (13%)
Query: 20 IGQGSYGSVYLGKLRG-------KNAAIKQMK----NTKSKEFSSELKILCKV--HSNLI 66
+G+G++G V G + A+K +K +++ + SELKIL + H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 67 ELIGYAA-GGDSLFLVYEYAQNGALSDHL---------HWPSVKGKKPLAWTTRVQIALD 116
L+G G L ++ E+ + G LS +L + P K L + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 117 AAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPE-IAAAASRIV 175
AKG+E++ +HRD+ NILL KI DFGL + + P+ + +R+
Sbjct: 157 VAKGMEFLASRKX---IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL- 212
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++APE + D T +SDV++FGV+L E+ +
Sbjct: 213 -PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 21/222 (9%)
Query: 7 VRDATSNFSTSLKIGQGSYGSVYLGKL--RGKNAAIKQM------KNTKSKEFSSELKIL 58
+ + +F +G+GS+ VY + G AIK + K + +E+KI
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGK-KPLAWTTRVQIALD 116
C++ H +++EL Y + ++LV E NG ++ +L K + KP +
Sbjct: 66 CQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL-----KNRVKPFSENEARHFMHQ 120
Query: 117 AAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVG 176
G+ Y+H + +HRD+ SN+LL N KIADFGL L+ E + G
Sbjct: 121 IITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE---KHYTLCG 174
Query: 177 TFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDA 218
T Y++PE +SDV++ G + L+ G+ D
Sbjct: 175 TPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDT 216
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 23/210 (10%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT-----KSKEFSSELKILCKV- 61
+ +F +G GS+G V+L + R G+ A+K +K K E +++ +++ +
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV 63
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H +I + G +F++ +Y + G L L S + P+A ++ L
Sbjct: 64 THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLR-KSQRFPNPVAKFYAAEVCL----A 118
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
LEY+H ++RD+K NILLD N KI DFG K + P++ + GT Y
Sbjct: 119 LEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAK---YVPDVTYX---LCGTPDY 169
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITG 210
+APE V D ++FG+++ E++ G
Sbjct: 170 IAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 22/207 (10%)
Query: 13 NFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKILCKV-------HS 63
+F +G+G +G+VYL + R A+K + T+ ++ E ++ +V H
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 64 NLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEY 123
N++ L GY ++L+ EYA G + L S ++ A + A L Y
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTA-----TYITELANALSY 127
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
H +HRD+K N+LL SN KIADFG H+P ++ + + GT YL P
Sbjct: 128 CHSKR---VIHRDIKPENLLLGSNGELKIADFGWSV---HAP--SSRRTTLCGTLDYLPP 179
Query: 184 EYVRDGCVTTKSDVYAFGVVLMELITG 210
E + K D+++ GV+ E + G
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 30/215 (13%)
Query: 20 IGQGSYGSVYLGKLRG-------KNAAIKQMK----NTKSKEFSSELKILCKV--HSNLI 66
+G+G++G V G + A+K +K +++ + SELKIL + H N++
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 67 ELIGYAA-GGDSLFLVYEYAQNGALSDHLH----------WPSVKGKKPLAWTTRVQIAL 115
L+G G L ++ E+ + G LS +L P K L + +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPE-IAAAASRI 174
AKG+E++ +HRD+ NILL KI DFGL + + P+ + +R+
Sbjct: 156 QVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 175 VGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++APE + D T +SDV++FGV+L E+ +
Sbjct: 213 --PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 29/212 (13%)
Query: 12 SNFSTSLKIGQGSYGSVYLGK--LRGKNAAIK-----QMKNTKSKEFSSELKILCKV-HS 63
N+ IG+G++ V L + L G+ A+K Q+ T ++ E++I+ + H
Sbjct: 15 GNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 64 NLIELIGYAAGGDSLFLVYEYAQNGALSDHL-HWPSVKGKKPLAWTTRVQIALDAAKGLE 122
N+++L +L+LV EYA G + D+L +K K+ A ++ ++
Sbjct: 75 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI------VSAVQ 128
Query: 123 YIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLA 182
Y HQ Y VHRD+K N+LLD + KIADFG + + G+ Y A
Sbjct: 129 YCHQ---KYIVHRDLKAENLLLDGDMNIKIADFG----FSNEFTVGNKLDTFCGSPPYAA 181
Query: 183 PEYVR----DGCVTTKSDVYAFGVVLMELITG 210
PE + DG + DV++ GV+L L++G
Sbjct: 182 PELFQGKKYDG---PEVDVWSLGVILYTLVSG 210
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 105/221 (47%), Gaps = 20/221 (9%)
Query: 6 EVRDATSN-FSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTKSKEFSSEL------K 56
E + T N F +G+G +G V ++R GK A K+++ + K+ E +
Sbjct: 177 ERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQ 236
Query: 57 ILCKVHSNLIELIGYA-AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIAL 115
IL KV+S + + YA D+L LV G L H++ G+ V A
Sbjct: 237 ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYH---MGQAGFPEARAVFYAA 293
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
+ GLE +H + V+RD+K NILLD + +I+D GL H PE R V
Sbjct: 294 EICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAV---HVPEGQTIKGR-V 346
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSR 216
GT GY+APE V++ T D +A G +L E+I GQ +
Sbjct: 347 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 113/240 (47%), Gaps = 29/240 (12%)
Query: 2 FSYNEVRD-ATSNFSTSLKIGQGSYGSVY------LGKLRGK-NAAIKQMKNT----KSK 49
YNE + +N +G G++G V LGK A+K +K+T + +
Sbjct: 27 LPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKE 86
Query: 50 EFSSELKILCKV--HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSV-----KGK 102
SELKI+ + H N++ L+G G + ++ EY G L + L + +
Sbjct: 87 ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDG 146
Query: 103 KPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVK-LL 161
+PL + + A+G+ ++ +HRDV N+LL + AKI DFGL + ++
Sbjct: 147 RPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIM 203
Query: 162 EHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPG 221
S I +R+ ++APE + D T +SDV+++G++L E+ + L + PG
Sbjct: 204 NDSNYIVKGNARL--PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGLNPYPG 257
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 104/218 (47%), Gaps = 34/218 (15%)
Query: 20 IGQGSYGSVYLGKLRGKN---------AAIKQMKNTKSK----EFSSELKILCKV--HSN 64
+G+G++G V + + G + A+K +K+ ++ + SE++++ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-----------KKPLAWTTRVQI 113
+I L+G L+++ EYA G L ++L G ++ + + V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
A+G+EY+ +HRD+ N+L+ N KIADFGL + + + I
Sbjct: 163 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDINN---IDXXKKT 216
Query: 174 IVGTFG--YLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
G ++APE + D T +SDV++FGV++ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 105/221 (47%), Gaps = 20/221 (9%)
Query: 6 EVRDATSN-FSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTKSKEFSSEL------K 56
E + T N F +G+G +G V ++R GK A K+++ + K+ E +
Sbjct: 177 ERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQ 236
Query: 57 ILCKVHSNLIELIGYA-AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIAL 115
IL KV+S + + YA D+L LV G L H++ G+ V A
Sbjct: 237 ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYH---MGQAGFPEARAVFYAA 293
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
+ GLE +H + V+RD+K NILLD + +I+D GL H PE R V
Sbjct: 294 EICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAV---HVPEGQTIKGR-V 346
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSR 216
GT GY+APE V++ T D +A G +L E+I GQ +
Sbjct: 347 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIELIGYAAGGD 76
IG G +G V+ K R GK IK++K K E+K L K+ H N++ G G D
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA-EREVKALAKLDHVNIVHYNGCWDGFD 77
Query: 77 ----------------SLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
LF+ E+ G L W + + L +++ KG
Sbjct: 78 YDPETSSKNSSRSKTKCLFIQMEFCDKGTLE---QWIEKRRGEKLDKVLALELFEQITKG 134
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
++YIH ++RD+K SNI L + KI DFGLV L++ R GT Y
Sbjct: 135 VDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND----GKRXRSKGTLRY 187
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELI 208
++PE + + D+YA G++L EL+
Sbjct: 188 MSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 25/228 (10%)
Query: 2 FSYNEVRD-ATSNFSTSLKIGQGSYGSVY------LGKLRGK-NAAIKQMKNT----KSK 49
YNE + +N +G G++G V LGK A+K +K+T + +
Sbjct: 35 LPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKE 94
Query: 50 EFSSELKILCKV--HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSV-----KGK 102
SELKI+ + H N++ L+G G + ++ EY G L + L + +
Sbjct: 95 ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDG 154
Query: 103 KPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVK-LL 161
+PL + + A+G+ ++ +HRDV N+LL + AKI DFGL + ++
Sbjct: 155 RPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIM 211
Query: 162 EHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
S I +R+ ++APE + D T +SDV+++G++L E+ +
Sbjct: 212 NDSNYIVKGNARL--PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 22/207 (10%)
Query: 13 NFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKILCKV-------HS 63
+F +G+G +G+VYL + R A+K + T+ ++ E ++ +V H
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 64 NLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEY 123
N++ L GY ++L+ EYA G + L S ++ A + A L Y
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTA-----TYITELANALSY 127
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
H +HRD+K N+LL SN KIADFG H+P ++ + GT YL P
Sbjct: 128 CHSKR---VIHRDIKPENLLLGSNGELKIADFGWSV---HAP--SSRRDTLCGTLDYLPP 179
Query: 184 EYVRDGCVTTKSDVYAFGVVLMELITG 210
E + K D+++ GV+ E + G
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 39/228 (17%)
Query: 12 SNFSTSLKIGQGSYGSVYLGK--LRGKNAAIKQMKNTKSK--EFSSELKILCKVH----- 62
S+F +GQG++G V + L + AIK++++T+ K SE+ +L ++
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVV 65
Query: 63 ---------SNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
N ++ + +LF+ EY +NG L D +H ++ ++ W QI
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQI 125
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
+ L YIH +HRD+K NI +D + KI DFGL K + S +I S+
Sbjct: 126 L----EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 174 -----------IVGTFGYLAPEYVRDGC--VTTKSDVYAFGVVLMELI 208
+GT Y+A E V DG K D+Y+ G++ E+I
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATE-VLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 31/216 (14%)
Query: 20 IGQGSYGSVYLGKLRG-------KNAAIKQMK----NTKSKEFSSELKILCKV--HSNLI 66
+G+G++G V G + A+K +K +++ + SELKIL + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 67 ELIGYAA-GGDSLFLVYEYAQNGALSDHLH-----------WPSVKGKKPLAWTTRVQIA 114
L+G G L ++ E+ + G LS +L P K L + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 115 LDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPE-IAAAASR 173
AKG+E++ +HRD+ NILL KI DFGL + + P+ + +R
Sbjct: 155 FQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 174 IVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ ++APE + D T +SDV++FGV+L E+ +
Sbjct: 212 L--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 114/253 (45%), Gaps = 31/253 (12%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKNA----AIKQMKNTKSKEFSSELKILCKV---- 61
A +F +G+G +G+VYL R KN+ A+K + + ++ E ++ +V
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLA--REKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 62 ---HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAA 118
H N++ L GY ++L+ EYA G + L K K T I + A
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYIT-ELA 118
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTF 178
L Y H +HRD+K N+LL S KIADFG H+P AA + GT
Sbjct: 119 NALSYCHSKK---VIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAA--LCGTL 170
Query: 179 GYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238
YL PE + K D+++ GV+ E + G+ +AN + Y + S V++
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQDTY-KRISRVEFTFPD 227
Query: 239 F--NDTKDFMAKL 249
F +D +++L
Sbjct: 228 FVTEGARDLISRL 240
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 104/218 (47%), Gaps = 34/218 (15%)
Query: 20 IGQGSYGSVYLGKLRGKN---------AAIKQMKNTKSK----EFSSELKILCKV--HSN 64
+G+G++G V + + G + A+K +K+ ++ + SE++++ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-----------KKPLAWTTRVQI 113
+I L+G L+++ EYA G L ++L G ++ + + V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
A+G+EY+ +HRD+ N+L+ N KIADFGL + + + I
Sbjct: 163 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDINN---IDXXKKT 216
Query: 174 IVGTFG--YLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
G ++APE + D T +SDV++FGV++ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 20 IGQGSYGSVYLGKLRGKN---------AAIKQMKNTKSKE----FSSELKILCKV--HSN 64
+G+G++G V + + G + A+K +K+ ++E SE++++ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-----------KKPLAWTTRVQI 113
+I L+G L+++ EYA G L ++L G ++ + + V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
A+G+EY+ +HRD+ N+L+ N KIADFGL + + + +
Sbjct: 163 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 174 IVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ ++APE + D T +SDV++FGV++ E+ T
Sbjct: 220 RL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 119/284 (41%), Gaps = 31/284 (10%)
Query: 9 DATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQM----KNTKSKEFSSELKILCKVH 62
D F+ +IG+GS+G VY G + AIK + + ++ E+ +L +
Sbjct: 16 DPEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCD 75
Query: 63 SNLI-ELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGL 121
S I G L+++ EY G+ D L PL T I + KGL
Sbjct: 76 SPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLK------PGPLEETYIATILREILKGL 129
Query: 122 EYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYL 181
+Y+H K +HRD+K +N+LL K+ADFG+ L + + VGT ++
Sbjct: 130 DYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLT---DTQIKRNXFVGTPFWM 183
Query: 182 APEYVRDGCVTTKSDVYAFGVVLMELITGQQA-----------LSRDANPGNNQYTEHRS 230
APE ++ K+D+++ G+ +EL G+ L +P + +
Sbjct: 184 APEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQHSKP 243
Query: 231 LVDYMLAVFNDTKDFMAKLTECLDPN-LTRYHKDSMLQMALLSK 273
+++ A N F E L +TRY K + L+ +
Sbjct: 244 FKEFVEACLNKDPRFRPTAKELLKHKFITRYTKKTSFLTELIDR 287
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 122/269 (45%), Gaps = 26/269 (9%)
Query: 5 NEVRDATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMK-------NTKSKEFSSELKI 57
N + D F+ +IG+GS+G V+ G + + + +K + ++ E+ +
Sbjct: 16 NNIADPEELFTKLERIGKGSFGEVFKG-IDNRTQQVVAIKIIDLEEAEDEIEDIQQEITV 74
Query: 58 LCKVHSNLI-ELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALD 116
L + S+ + + G G L+++ EY G+ D L P + +
Sbjct: 75 LSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLR------AGPFDEFQIATMLKE 128
Query: 117 AAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVG 176
KGL+Y+H K +HRD+K +N+LL K+ADFG+ L + + VG
Sbjct: 129 ILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLT---DTQIKRNTFVG 182
Query: 177 TFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYML 236
T ++APE ++ +K+D+++ G+ +EL G+ S D +P + ++ ++
Sbjct: 183 TPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNS-DMHPMRVLFLIPKNNPPTLV 241
Query: 237 AVFNDTKDFMAKLTECL--DPNLTRYHKD 263
F TK F + CL DP+ K+
Sbjct: 242 GDF--TKSFKEFIDACLNKDPSFRPTAKE 268
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 31/216 (14%)
Query: 20 IGQGSYGSVYLGKLRG-------KNAAIKQMK----NTKSKEFSSELKILCKV--HSNLI 66
+G+G++G V G + A+K +K +++ + SELKIL + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 67 ELIGYAA-GGDSLFLVYEYAQNGALSDHLH-----------WPSVKGKKPLAWTTRVQIA 114
L+G G L ++ E+ + G LS +L P K L + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 115 LDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPE-IAAAASR 173
AKG+E++ +HRD+ NILL KI DFGL + + P+ + +R
Sbjct: 146 FQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 174 IVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ ++APE + D T +SDV++FGV+L E+ +
Sbjct: 203 L--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 31/216 (14%)
Query: 20 IGQGSYGSVYLGKLRG-------KNAAIKQMK----NTKSKEFSSELKILCKV--HSNLI 66
+G+G++G V G + A+K +K +++ + SELKIL + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 67 ELIGYAA-GGDSLFLVYEYAQNGALSDHLH-----------WPSVKGKKPLAWTTRVQIA 114
L+G G L ++ E+ + G LS +L P K L + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 115 LDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPE-IAAAASR 173
AKG+E++ +HRD+ NILL KI DFGL + + P+ + +R
Sbjct: 155 FQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 174 IVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ ++APE + D T +SDV++FGV+L E+ +
Sbjct: 212 L--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 104/230 (45%), Gaps = 27/230 (11%)
Query: 5 NEVRD---ATSNFSTSLKIGQGSYGSVYLGKLRGKN--------AAIKQMKNTKSKEFSS 53
N++RD ++ IG+G++G V L + + + + +K + S F
Sbjct: 59 NKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWE 118
Query: 54 ELKILCKVHSNLIELIGYAAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQ 112
E I+ +S + + YA D L++V EY G L + + V K +T V
Sbjct: 119 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVV 178
Query: 113 IALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAAS 172
+ALDA + +IH RDVK N+LLD + K+ADFG ++ + E
Sbjct: 179 LALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTC--MKMNKEGMVRCD 227
Query: 173 RIVGTFGYLAPEYVR----DGCVTTKSDVYAFGVVLMELITGQQALSRDA 218
VGT Y++PE ++ DG + D ++ GV L E++ G D+
Sbjct: 228 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 277
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 31/216 (14%)
Query: 20 IGQGSYGSVYLGKLRG-------KNAAIKQMK----NTKSKEFSSELKILCKV--HSNLI 66
+G+G++G V G + A+K +K +++ + SELKIL + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 67 ELIGYAA-GGDSLFLVYEYAQNGALSDHLH-----------WPSVKGKKPLAWTTRVQIA 114
L+G G L ++ E+ + G LS +L P K L + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 115 LDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPE-IAAAASR 173
AKG+E++ +HRD+ NILL KI DFGL + + P+ + +R
Sbjct: 146 FQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 174 IVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ ++APE + D T +SDV++FGV+L E+ +
Sbjct: 203 L--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 105/233 (45%), Gaps = 27/233 (11%)
Query: 5 NEVRD---ATSNFSTSLKIGQGSYGSVYLGKLRGKN--------AAIKQMKNTKSKEFSS 53
N++RD ++ IG+G++G V L + + + + +K + S F
Sbjct: 64 NKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWE 123
Query: 54 ELKILCKVHSNLIELIGYAAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQ 112
E I+ +S + + YA D L++V EY G L + + V K +T V
Sbjct: 124 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVV 183
Query: 113 IALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAAS 172
+ALDA + +IH RDVK N+LLD + K+ADFG ++ + E
Sbjct: 184 LALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTC--MKMNKEGMVRCD 232
Query: 173 RIVGTFGYLAPEYVR----DGCVTTKSDVYAFGVVLMELITGQQALSRDANPG 221
VGT Y++PE ++ DG + D ++ GV L E++ G D+ G
Sbjct: 233 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG 285
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 104/230 (45%), Gaps = 27/230 (11%)
Query: 5 NEVRD---ATSNFSTSLKIGQGSYGSVYLGKLRGKN--------AAIKQMKNTKSKEFSS 53
N++RD ++ IG+G++G V L + + + + +K + S F
Sbjct: 64 NKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWE 123
Query: 54 ELKILCKVHSNLIELIGYAAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQ 112
E I+ +S + + YA D L++V EY G L + + V K +T V
Sbjct: 124 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVV 183
Query: 113 IALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAAS 172
+ALDA + +IH RDVK N+LLD + K+ADFG ++ + E
Sbjct: 184 LALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTC--MKMNKEGMVRCD 232
Query: 173 RIVGTFGYLAPEYVR----DGCVTTKSDVYAFGVVLMELITGQQALSRDA 218
VGT Y++PE ++ DG + D ++ GV L E++ G D+
Sbjct: 233 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 282
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 31/216 (14%)
Query: 20 IGQGSYGSVYLGKLRG-------KNAAIKQMK----NTKSKEFSSELKILCKV--HSNLI 66
+G+G++G V G + A+K +K +++ + SELKIL + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 67 ELIGYAA-GGDSLFLVYEYAQNGALSDHLH-----------WPSVKGKKPLAWTTRVQIA 114
L+G G L ++ E+ + G LS +L P K L + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 115 LDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPE-IAAAASR 173
AKG+E++ +HRD+ NILL KI DFGL + + P+ + +R
Sbjct: 155 FQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 174 IVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ ++APE + D T +SDV++FGV+L E+ +
Sbjct: 212 L--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 31/216 (14%)
Query: 20 IGQGSYGSVYLGKLRG-------KNAAIKQMK----NTKSKEFSSELKILCKV--HSNLI 66
+G+G++G V G + A+K +K +++ + SELKIL + H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 67 ELIGYAA-GGDSLFLVYEYAQNGALSDHL-----------HWPSVKGKKPLAWTTRVQIA 114
L+G G L ++ E+ + G LS +L P K L + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 115 LDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPE-IAAAASR 173
AKG+E++ +HRD+ NILL KI DFGL + + P+ + +R
Sbjct: 157 FQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 174 IVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ ++APE + D T +SDV++FGV+L E+ +
Sbjct: 214 L--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 20 IGQGSYGSVYLGK--LRGKNAAIKQMKNTKSKEFSSELKILCKV-------HSNLIELIG 70
+G G++G V +GK L G A+K + K + KI ++ H ++I+L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 71 YAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +F+V EY G L D++ G+ L ++ G++Y H++
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYI---CKNGR--LDEKESRRLFQQILSGVDYCHRHM-- 136
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
VHRD+K N+LLD++ AKIADFGL ++ + + G+ Y APE +
Sbjct: 137 -VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC----GSPNYAAPEVISGRL 191
Query: 191 VT-TKSDVYAFGVVLMELITGQQALSRDANP 220
+ D+++ GV+L L+ G D P
Sbjct: 192 YAGPEVDIWSSGVILYALLCGTLPFDDDHVP 222
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 22/203 (10%)
Query: 20 IGQGSYGSVYL------GKLRGKNAAIKQMKNTKSKEFSS----ELKILCKV-HSNLIEL 68
+G+G +G V L G+ A+K +K + S E+ IL + H ++I+
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 69 IGYA--AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ 126
G AG SL LV EY G+L D+L S+ + L + ++ +G+ Y+H
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQI------CEGMAYLHA 152
Query: 127 YTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV 186
+Y+HRD+ N+LLD++ KI DFGL K + E + APE +
Sbjct: 153 Q---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECL 209
Query: 187 RDGCVTTKSDVYAFGVVLMELIT 209
++ SDV++FGV L EL+T
Sbjct: 210 KEYKFYYASDVWSFGVTLYELLT 232
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 27/212 (12%)
Query: 20 IGQGSYGSVYLGKLRG-------KNAAIKQMK----NTKSKEFSSELKILCKV--HSNLI 66
+G+G++G V G + A+K +K +++ + SELKIL + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 67 ELIGYAA-GGDSLFLVYEYAQNGALSDHL-----HWPSVKG--KKPLAWTTRVQIALDAA 118
L+G G L ++ E+ + G LS +L + K K L + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPE-IAAAASRIVGT 177
KG+E++ +HRD+ NILL KI DFGL + + P+ + +R+
Sbjct: 155 KGMEFLASRKX---IHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL--P 209
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++APE + D T +SDV++FGV+L E+ +
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 29/212 (13%)
Query: 12 SNFSTSLKIGQGSYGSVYLGK--LRGKNAAIK-----QMKNTKSKEFSSELKILCKV-HS 63
N+ IG+G++ V L + L GK A+K Q+ ++ ++ E++I+ + H
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 64 NLIELIGYAAGGDSLFLVYEYAQNGALSDHL-HWPSVKGKKPLAWTTRVQIALDAAKGLE 122
N+++L +L+LV EYA G + D+L +K K+ A ++ ++
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI------VSAVQ 127
Query: 123 YIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLA 182
Y HQ + VHRD+K N+LLD++ KIADFG ++ A G Y A
Sbjct: 128 YCHQ---KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA----FCGAPPYAA 180
Query: 183 PEYVR----DGCVTTKSDVYAFGVVLMELITG 210
PE + DG + DV++ GV+L L++G
Sbjct: 181 PELFQGKKYDG---PEVDVWSLGVILYTLVSG 209
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 31/216 (14%)
Query: 20 IGQGSYGSVYLGKLRG-------KNAAIKQMK----NTKSKEFSSELKILCKV--HSNLI 66
+G+G++G V G + A+K +K +++ + SELKIL + H N++
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 67 ELIGYAA-GGDSLFLVYEYAQNGALSDHLH-----------WPSVKGKKPLAWTTRVQIA 114
L+G G L ++ E+ + G LS +L P K L + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 115 LDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPE-IAAAASR 173
AKG+E++ +HRD+ NILL KI DFGL + + P+ + +R
Sbjct: 192 FQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 174 IVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ ++APE + D T +SDV++FGV+L E+ +
Sbjct: 249 L--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 31/216 (14%)
Query: 20 IGQGSYGSVYLGKLRG-------KNAAIKQMK----NTKSKEFSSELKILCKV--HSNLI 66
+G+G++G V G + A+K +K +++ + SELKIL + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 67 ELIGYAA-GGDSLFLVYEYAQNGALSDHLH-----------WPSVKGKKPLAWTTRVQIA 114
L+G G L ++ E+ + G LS +L P K L + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 115 LDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPE-IAAAASR 173
AKG+E++ +HRD+ NILL KI DFGL + + P+ + +R
Sbjct: 146 FQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 174 IVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ ++APE + D T +SDV++FGV+L E+ +
Sbjct: 203 L--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 105/218 (48%), Gaps = 34/218 (15%)
Query: 20 IGQGSYGSVYLGKLRGKN---------AAIKQMKNTKSK----EFSSELKILCKV--HSN 64
+G+G++G V + + G + A+K +K+ ++ + SE++++ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-----------KKPLAWTTRVQI 113
+I L+G L+++ EYA G L ++L G ++ + + V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
A+G+EY+ +HRD+ N+L+ N KIADFGL + + + I +
Sbjct: 163 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDINN---IDYYKNT 216
Query: 174 IVGTFG--YLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
G ++APE + D T +SDV++FGV++ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 113/251 (45%), Gaps = 27/251 (10%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKILCKV------ 61
A +F +G+G +G+VYL + + + A+K + + ++ E ++ +V
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H N++ L GY ++L+ EYA G + L K K T I + A
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYIT-ELANA 117
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L Y H +HRD+K N+LL S KIADFG H+P ++ + + GT Y
Sbjct: 118 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAP--SSRRTTLCGTLDY 169
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF- 239
L PE + K D+++ GV+ E + G+ +AN Y + S V++ F
Sbjct: 170 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETY-KRISRVEFTFPDFV 226
Query: 240 -NDTKDFMAKL 249
+D +++L
Sbjct: 227 TEGARDLISRL 237
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 107/229 (46%), Gaps = 37/229 (16%)
Query: 13 NFSTSLKIGQGSYGSVYLGK---LRGK----NAAIKQMKNTKS----KEFSSELKILCKV 61
N +G+G +G V L+G+ A+K +K S ++ SE +L +V
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG------------------- 101
H ++I+L G + L L+ EYA+ G+L L G
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 102 KKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVK-L 160
++ L + A ++G++Y+ + + VHRD+ NIL+ + KI+DFGL + +
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 161 LEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
E + + RI ++A E + D TT+SDV++FGV+L E++T
Sbjct: 201 YEEDSXVKRSQGRI--PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 27/212 (12%)
Query: 20 IGQGSYGSVYLGKLRG-------KNAAIKQMK----NTKSKEFSSELKILCKV--HSNLI 66
+G+G++G V G + A+K +K +++ + SELKIL + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 67 ELIGYAA-GGDSLFLVYEYAQNGALSDHL-----HWPSVKG--KKPLAWTTRVQIALDAA 118
L+G G L ++ E+ + G LS +L + K K L + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPE-IAAAASRIVGT 177
KG+E++ +HRD+ NILL KI DFGL + + P+ + +R+
Sbjct: 155 KGMEFLASRKX---IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL--P 209
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++APE + D T +SDV++FGV+L E+ +
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 27/251 (10%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKILCKV------ 61
A +F +G+G +G+VYL + + A+K + + ++ E ++ +V
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H N++ L GY ++L+ EYA G + L K K T I + A
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ----KLSKFDEQRTATYIT-ELANA 125
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L Y H +HRD+K N+LL S KIADFG H+P ++ + + GT Y
Sbjct: 126 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAP--SSRRTTLCGTLDY 177
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF- 239
L PE + K D+++ GV+ E + G+ +AN Y + S V++ F
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETY-KRISRVEFTFPDFV 234
Query: 240 -NDTKDFMAKL 249
+D +++L
Sbjct: 235 TEGARDLISRL 245
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 104/214 (48%), Gaps = 33/214 (15%)
Query: 12 SNFSTSLKIGQGSYGSVYLGK--LRGKNAAIK-----QMKNTKSKEFSSELKILCKV-HS 63
N+ IG+G++ V L + L GK A+K Q+ ++ ++ E++I+ + H
Sbjct: 7 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 66
Query: 64 NLIELIGYAAGGDSLFLVYEYAQNGALSDHL---HWPSVKGKKPLAWTTRVQIALDAAKG 120
N+++L +L+LV EYA G + D+L W +K K+ A ++
Sbjct: 67 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGW--MKEKEARAKFRQI------VSA 118
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
++Y HQ + VHRD+K N+LLD++ KIADFG + G+ Y
Sbjct: 119 VQYCHQ---KFIVHRDLKAENLLLDADMNIKIADFG----FSNEFTFGNKLDTFCGSPPY 171
Query: 181 LAPEYVR----DGCVTTKSDVYAFGVVLMELITG 210
APE + DG + DV++ GV+L L++G
Sbjct: 172 AAPELFQGKKYDG---PEVDVWSLGVILYTLVSG 202
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 20 IGQGSYGSVYLGKLRGKN---------AAIKQMKNTKSK----EFSSELKILCKV--HSN 64
+G+G++G V + + G + A+K +K+ ++ + SE++++ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-----------KKPLAWTTRVQI 113
+I L+G L+++ EYA G L ++L G ++ + + V
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
A+G+EY+ +HRD+ N+L+ N KIADFGL + + + +
Sbjct: 163 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 174 IVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ ++APE + D T +SDV++FGV++ E+ T
Sbjct: 220 RL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 111/234 (47%), Gaps = 31/234 (13%)
Query: 2 FSYNEVRD-ATSNFSTSLKIGQGSYGSVY------LGKLRGK-NAAIKQMKNT----KSK 49
YNE + +N +G G++G V LGK A+K +K+T + +
Sbjct: 35 LPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKE 94
Query: 50 EFSSELKILCKV--HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHL-----------HW 96
SELKI+ + H N++ L+G G + ++ EY G L + L +
Sbjct: 95 ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYN 154
Query: 97 PSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFG 156
PS ++ L+ + + A+G+ ++ +HRDV N+LL + AKI DFG
Sbjct: 155 PSHNPEEQLSSRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFG 211
Query: 157 LVK-LLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
L + ++ S I +R+ ++APE + D T +SDV+++G++L E+ +
Sbjct: 212 LARDIMNDSNYIVKGNARL--PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 31/216 (14%)
Query: 20 IGQGSYGSVYLGKLRG-------KNAAIKQMK----NTKSKEFSSELKILCKV--HSNLI 66
+G+G++G V G + A+K +K +++ + SELKIL + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 67 ELIGYAA-GGDSLFLVYEYAQNGALSDHLH-----------WPSVKGKKPLAWTTRVQIA 114
L+G G L ++ E+ + G LS +L P K L + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 115 LDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPE-IAAAASR 173
AKG+E++ +HRD+ NILL KI DFGL + + P+ + +R
Sbjct: 146 FQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 174 IVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ ++APE + D T +SDV++FGV+L E+ +
Sbjct: 203 L--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 106/217 (48%), Gaps = 29/217 (13%)
Query: 20 IGQGSYGSVYLGKL---RGK--NAAIKQMKNT----KSKEFSSELKILCKV-HSNLIELI 69
IG+G +G VY G L GK + A+K + + +F +E I+ H N++ L+
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 70 GYAAGGD-SLFLVYEYAQNGALSDHL----HWPSVKGKKPLAWTTRVQIALDAAKGLEYI 124
G + S +V Y ++G L + + H P+VK + L AKG++Y+
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--------DLIGFGLQVAKGMKYL 148
Query: 125 HQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG--YLA 182
+VHRD+ N +LD F K+ADFGL + + + E + ++ ++A
Sbjct: 149 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEXXSVHNKTGAKLPVKWMA 204
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDAN 219
E ++ TTKSDV++FGV+L EL+T D N
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 241
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 111/251 (44%), Gaps = 27/251 (10%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKILCKV------ 61
A +F +G+G +G+VYL + + A+K + + ++ E ++ +V
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H N++ L GY ++L+ EYA G + L K K T I + A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYIT-ELANA 120
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L Y H +HRD+K N+LL S KIADFG H+P AA + GT Y
Sbjct: 121 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAA--LCGTLDY 172
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF- 239
L PE + K D+++ GV+ E + G+ +AN Y + S V++ F
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETY-KRISRVEFTFPDFV 229
Query: 240 -NDTKDFMAKL 249
+D +++L
Sbjct: 230 TEGARDLISRL 240
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 111/251 (44%), Gaps = 27/251 (10%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKILCKV------ 61
A +F +G+G +G+VYL + + A+K + + ++ E ++ +V
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H N++ L GY ++L+ EYA G + L K K T I + A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYIT-ELANA 123
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L Y H +HRD+K N+LL S KIADFG H+P AA + GT Y
Sbjct: 124 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAA--LCGTLDY 175
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF- 239
L PE + K D+++ GV+ E + G+ +AN Y + S V++ F
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETY-KRISRVEFTFPDFV 232
Query: 240 -NDTKDFMAKL 249
+D +++L
Sbjct: 233 TEGARDLISRL 243
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 20 IGQGSYGSVYLGKLRGKN---------AAIKQMKNTKSK----EFSSELKILCKV--HSN 64
+G+G++G V + + G + A+K +K+ ++ + SE++++ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-----------KKPLAWTTRVQI 113
+I L+G L+++ EYA G L ++L G ++ + + V
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
A+G+EY+ +HRD+ N+L+ N KIADFGL + + + +
Sbjct: 163 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 174 IVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ ++APE + D T +SDV++FGV++ E+ T
Sbjct: 220 RL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 13 NFSTSLKIGQGSYGSVYLGKLRGK-------NAAIKQMKNTKSKE----FSSELKILCKV 61
N + +G G++G VY G++ G A+K + S++ F E I+ K+
Sbjct: 32 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKL 91
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKP--LAWTTRVQIALDAA 118
H N++ IG + F++ E G L L + +P LA + +A D A
Sbjct: 92 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILL---DSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
G +Y+ + +++HRD+ N LL AKI DFG+ + + + ++
Sbjct: 152 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 208
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++ PE +G T+K+D ++FGV+L E+ +
Sbjct: 209 -PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 94/221 (42%), Gaps = 43/221 (19%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIELIGYAAGGD 76
IG G +G V+ K R GK I+++K K E+K L K+ H N++ G G D
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKA-EREVKALAKLDHVNIVHYNGCWDGFD 78
Query: 77 -----------------------------SLFLVYEYAQNGALSDHLHWPSVKGKKPLAW 107
LF+ E+ G L W + + L
Sbjct: 79 YDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLE---QWIEKRRGEKLDK 135
Query: 108 TTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEI 167
+++ KG++YIH +HRD+K SNI L + KI DFGLV L++
Sbjct: 136 VLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKND--- 189
Query: 168 AAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELI 208
+R GT Y++PE + + D+YA G++L EL+
Sbjct: 190 -GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 13 NFSTSLKIGQGSYGSVYLGKLRGK-------NAAIKQMKNTKSKE----FSSELKILCKV 61
N + +G G++G VY G++ G A+K + S++ F E I+ K+
Sbjct: 46 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKL 105
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKP--LAWTTRVQIALDAA 118
H N++ IG + F++ E G L L + +P LA + +A D A
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILL---DSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
G +Y+ + +++HRD+ N LL AKI DFG+ + + + ++
Sbjct: 166 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 222
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++ PE +G T+K+D ++FGV+L E+ +
Sbjct: 223 -PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 103/216 (47%), Gaps = 30/216 (13%)
Query: 20 IGQGSYGSVYLGKLRGKN---------AAIKQMKNTKSK----EFSSELKILCKV--HSN 64
+G+G +G V + + G + A+K +K+ ++ + SE++++ + H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-----------KKPLAWTTRVQI 113
+I L+G L+++ EYA G L ++L G ++ + + V
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
A+G+EY+ +HRD+ N+L+ N KIADFGL + + + +
Sbjct: 150 TYQLARGMEYLASQK---CIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 174 IVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ ++APE + D T +SDV++FGV++ E+ T
Sbjct: 207 RL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 103/216 (47%), Gaps = 30/216 (13%)
Query: 20 IGQGSYGSVYLGKLRGKN---------AAIKQMKNTKSK----EFSSELKILCKV--HSN 64
+G+G +G V + + G + A+K +K+ ++ + SE++++ + H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-----------KKPLAWTTRVQI 113
+I L+G L+++ EYA G L ++L G ++ + + V
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
A+G+EY+ +HRD+ N+L+ N KIADFGL + + + +
Sbjct: 152 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 174 IVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ ++APE + D T +SDV++FGV++ E+ T
Sbjct: 209 RL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 103/216 (47%), Gaps = 30/216 (13%)
Query: 20 IGQGSYGSVYLGKLRGKN---------AAIKQMKNTKSK----EFSSELKILCKV--HSN 64
+G+G +G V + + G + A+K +K+ ++ + SE++++ + H N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-----------KKPLAWTTRVQI 113
+I L+G L+++ EYA G L ++L G ++ + + V
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
A+G+EY+ +HRD+ N+L+ N KIADFGL + + + +
Sbjct: 209 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 174 IVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ ++APE + D T +SDV++FGV++ E+ T
Sbjct: 266 RL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 113/251 (45%), Gaps = 29/251 (11%)
Query: 13 NFSTSLKIGQGSYGSVYLGK--LRGKNAAIKQM------KNTKSKEFSSELKILCKV-HS 63
+F +G+GS+ +V L + + AIK + K K + E ++ ++ H
Sbjct: 36 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 95
Query: 64 NLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEY 123
++L + L+ YA+NG L ++ K TR A + LEY
Sbjct: 96 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTA-EIVSALEY 150
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAA-ASRIVGTFGYLA 182
+H +HRD+K NILL+ + +I DFG K+L SPE A A+ VGT Y++
Sbjct: 151 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL--SPESKQARANXFVGTAQYVS 205
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLV----DYMLAV 238
PE + + SD++A G ++ +L+ G N+Y + ++ D+ A
Sbjct: 206 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFR-----AGNEYLIFQKIIKLEYDFPAAF 260
Query: 239 FNDTKDFMAKL 249
F +D + KL
Sbjct: 261 FPKARDLVEKL 271
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 29/212 (13%)
Query: 12 SNFSTSLKIGQGSYGSVYLGK--LRGKNAAIK-----QMKNTKSKEFSSELKILCKV-HS 63
N+ IG+G++ V L + L GK A+K Q+ ++ ++ E++I+ + H
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 64 NLIELIGYAAGGDSLFLVYEYAQNGALSDHL-HWPSVKGKKPLAWTTRVQIALDAAKGLE 122
N+++L +L+LV EYA G + D+L +K K+ A ++ ++
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI------VSAVQ 127
Query: 123 YIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLA 182
Y HQ + VHRD+K N+LLD++ KIADFG ++ G+ Y A
Sbjct: 128 YCHQ---KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT----FCGSPPYAA 180
Query: 183 PEYVR----DGCVTTKSDVYAFGVVLMELITG 210
PE + DG + DV++ GV+L L++G
Sbjct: 181 PELFQGKKYDG---PEVDVWSLGVILYTLVSG 209
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 111/251 (44%), Gaps = 27/251 (10%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKILCKV------ 61
A +F +G+G +G+VYL + + A+K + + ++ E ++ +V
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H N++ L GY ++L+ EYA G + L K K T I + A
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ----KLSKFDEQRTATYIT-ELANA 125
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L Y H +HRD+K N+LL S KIADFG H+P ++ + GT Y
Sbjct: 126 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAP--SSRRXXLXGTLDY 177
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF- 239
L PE + K D+++ GV+ E + G+ +AN Y + S V++ F
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETY-KRISRVEFTFPDFV 234
Query: 240 -NDTKDFMAKL 249
+D +++L
Sbjct: 235 TEGARDLISRL 245
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 103/216 (47%), Gaps = 30/216 (13%)
Query: 20 IGQGSYGSVYLGKLRGKN---------AAIKQMKNTKSK----EFSSELKILCKV--HSN 64
+G+G +G V + + G + A+K +K+ ++ + SE++++ + H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-----------KKPLAWTTRVQI 113
+I L+G L+++ EYA G L ++L G ++ + + V
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
A+G+EY+ +HRD+ N+L+ N KIADFGL + + + +
Sbjct: 155 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 174 IVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ ++APE + D T +SDV++FGV++ E+ T
Sbjct: 212 RL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 37/229 (16%)
Query: 13 NFSTSLKIGQGSYGSVYLGK---LRGK----NAAIKQMKNTKS----KEFSSELKILCKV 61
N +G+G +G V L+G+ A+K +K S ++ SE +L +V
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG------------------- 101
H ++I+L G + L L+ EYA+ G+L L G
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 102 KKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVK-L 160
++ L + A ++G++Y+ + VHRD+ NIL+ + KI+DFGL + +
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 161 LEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
E + + RI ++A E + D TT+SDV++FGV+L E++T
Sbjct: 201 YEEDSXVKRSQGRI--PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 29/212 (13%)
Query: 12 SNFSTSLKIGQGSYGSVYLGK--LRGKNAAIK-----QMKNTKSKEFSSELKILCKV-HS 63
N+ IG+G++ V L + L GK A+K Q+ ++ ++ E++I+ + H
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 64 NLIELIGYAAGGDSLFLVYEYAQNGALSDHL-HWPSVKGKKPLAWTTRVQIALDAAKGLE 122
N+++L +L+LV EYA G + D+L +K K+ A ++ ++
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI------VSAVQ 127
Query: 123 YIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLA 182
Y HQ + VHRD+K N+LLD++ KIADFG ++ G+ Y A
Sbjct: 128 YCHQ---KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT----FCGSPPYAA 180
Query: 183 PEYVR----DGCVTTKSDVYAFGVVLMELITG 210
PE + DG + DV++ GV+L L++G
Sbjct: 181 PELFQGKKYDG---PEVDVWSLGVILYTLVSG 209
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 27/251 (10%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKILCKV------ 61
A +F +G+G +G+VYL + + A+K + + ++ E ++ +V
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H N++ L GY ++L+ EYA G + L K K T I + A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYIT-ELANA 120
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L Y H +HRD+K N+LL S KIADFG H+P ++ + + GT Y
Sbjct: 121 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAP--SSRRTELCGTLDY 172
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF- 239
L PE + K D+++ GV+ E + G+ +AN Y + S V++ F
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETY-KRISRVEFTFPDFV 229
Query: 240 -NDTKDFMAKL 249
+D +++L
Sbjct: 230 TEGARDLISRL 240
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 27/211 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGK--LRGKNAAIK-----QMKNTKSKEFSSELKILCKV-HS 63
N+ IG+G++ V L + L G+ AIK Q+ T ++ E++I+ + H
Sbjct: 12 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 71
Query: 64 NLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEY 123
N+++L +L+L+ EYA G + D+L + K+ A + QI ++Y
Sbjct: 72 NIVKLFEVIETEKTLYLIMEYASGGEVFDYL-VAHGRMKEKEARSKFRQIV----SAVQY 126
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
HQ VHRD+K N+LLD++ KIADFG + + G+ Y AP
Sbjct: 127 CHQKR---IVHRDLKAENLLLDADMNIKIADFG----FSNEFTVGGKLDTFCGSPPYAAP 179
Query: 184 EYVR----DGCVTTKSDVYAFGVVLMELITG 210
E + DG + DV++ GV+L L++G
Sbjct: 180 ELFQGKKYDG---PEVDVWSLGVILYTLVSG 207
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 104/216 (48%), Gaps = 30/216 (13%)
Query: 20 IGQGSYGSVYLGKLRGKN---------AAIKQMKNTKSK----EFSSELKILCKV--HSN 64
+G+G++G V + + G + A+K +K+ ++ + SE++++ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-----------KKPLAWTTRVQI 113
+I L+G L+++ EYA G L ++L G ++ + + V
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
A+G+EY+ +HRD+ N+L+ N +IADFGL + + + +
Sbjct: 163 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 174 IVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ ++APE + D T +SDV++FGV++ E+ T
Sbjct: 220 RL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 21/214 (9%)
Query: 13 NFSTSLKIGQGSYGSVYLGKLRGK-------NAAIKQMKNTKSKE----FSSELKILCKV 61
N + +G G++G VY G++ G A+K + S++ F E I+ K
Sbjct: 31 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 90
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKP--LAWTTRVQIALDAA 118
H N++ IG + F++ E G L L + +P LA + +A D A
Sbjct: 91 NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 150
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILL---DSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
G +Y+ + +++HRD+ N LL AKI DFG+ + + + ++
Sbjct: 151 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 207
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++ PE +G T+K+D ++FGV+L E+ +
Sbjct: 208 -PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 21/214 (9%)
Query: 13 NFSTSLKIGQGSYGSVYLGKLRGK-------NAAIKQMKNTKSKE----FSSELKILCKV 61
N + +G G++G VY G++ G A+K + S++ F E I+ K
Sbjct: 48 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 107
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKP--LAWTTRVQIALDAA 118
H N++ IG + F++ E G L L + +P LA + +A D A
Sbjct: 108 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 167
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILL---DSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
G +Y+ + +++HRD+ N LL AKI DFG+ + + + ++
Sbjct: 168 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 224
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++ PE +G T+K+D ++FGV+L E+ +
Sbjct: 225 -PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 21/214 (9%)
Query: 13 NFSTSLKIGQGSYGSVYLGKLRGK-------NAAIKQMKNTKSKE----FSSELKILCKV 61
N + +G G++G VY G++ G A+K + S++ F E I+ K
Sbjct: 32 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 91
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKP--LAWTTRVQIALDAA 118
H N++ IG + F++ E G L L + +P LA + +A D A
Sbjct: 92 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILL---DSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
G +Y+ + +++HRD+ N LL AKI DFG+ + + + ++
Sbjct: 152 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 208
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++ PE +G T+K+D ++FGV+L E+ +
Sbjct: 209 -PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 21/214 (9%)
Query: 13 NFSTSLKIGQGSYGSVYLGKLRGK-------NAAIKQMKNTKSKE----FSSELKILCKV 61
N + +G G++G VY G++ G A+K + S++ F E I+ K
Sbjct: 31 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 90
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKP--LAWTTRVQIALDAA 118
H N++ IG + F++ E G L L + +P LA + +A D A
Sbjct: 91 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 150
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILL---DSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
G +Y+ + +++HRD+ N LL AKI DFG+ + + + ++
Sbjct: 151 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 207
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++ PE +G T+K+D ++FGV+L E+ +
Sbjct: 208 -PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 27/251 (10%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKILCKV------ 61
A +F +G+G +G+VYL + + A+K + + ++ E ++ +V
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H N++ L GY ++L+ EYA G + L K K T I + A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYIT-ELANA 123
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L Y H +HRD+K N+LL S KIADFG H+P ++ + + GT Y
Sbjct: 124 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAP--SSRRTTLCGTLDY 175
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF- 239
L PE + K D+++ GV+ E + G+ +AN Y + S V++ F
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETY-KRISRVEFTFPDFV 232
Query: 240 -NDTKDFMAKL 249
+D +++L
Sbjct: 233 TEGARDLISRL 243
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 21/214 (9%)
Query: 13 NFSTSLKIGQGSYGSVYLGKLRGK-------NAAIKQMKNTKSKE----FSSELKILCKV 61
N + +G G++G VY G++ G A+K + S++ F E I+ K
Sbjct: 23 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 82
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKP--LAWTTRVQIALDAA 118
H N++ IG + F++ E G L L + +P LA + +A D A
Sbjct: 83 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 142
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILL---DSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
G +Y+ + +++HRD+ N LL AKI DFG+ + + + ++
Sbjct: 143 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 199
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++ PE +G T+K+D ++FGV+L E+ +
Sbjct: 200 -PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 27/251 (10%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKILCKV------ 61
A +F +G+G +G+VYL + + A+K + + ++ E ++ +V
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H N++ L GY ++L+ EYA G + L K K T I + A
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYIT-ELANA 137
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L Y H +HRD+K N+LL S KIADFG H+P ++ + + GT Y
Sbjct: 138 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAP--SSRRTTLCGTLDY 189
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF- 239
L PE + K D+++ GV+ E + G+ +AN Y + S V++ F
Sbjct: 190 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETY-KRISRVEFTFPDFV 246
Query: 240 -NDTKDFMAKL 249
+D +++L
Sbjct: 247 TEGARDLISRL 257
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 103/212 (48%), Gaps = 29/212 (13%)
Query: 12 SNFSTSLKIGQGSYGSVYLGK--LRGKNAAIK-----QMKNTKSKEFSSELKILCKV-HS 63
N+ IG+G++ V L + L GK A++ Q+ ++ ++ E++I+ + H
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 64 NLIELIGYAAGGDSLFLVYEYAQNGALSDHL-HWPSVKGKKPLAWTTRVQIALDAAKGLE 122
N+++L +L+LV EYA G + D+L +K K+ A ++ ++
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI------VSAVQ 127
Query: 123 YIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLA 182
Y HQ + VHRD+K N+LLD++ KIADFG + G+ Y A
Sbjct: 128 YCHQ---KFIVHRDLKAENLLLDADMNIKIADFG----FSNEFTFGNKLDEFCGSPPYAA 180
Query: 183 PEYVR----DGCVTTKSDVYAFGVVLMELITG 210
PE + DG + DV++ GV+L L++G
Sbjct: 181 PELFQGKKYDG---PEVDVWSLGVILYTLVSG 209
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 21/214 (9%)
Query: 13 NFSTSLKIGQGSYGSVYLGKLRGK-------NAAIKQMKNTKSKE----FSSELKILCKV 61
N + +G G++G VY G++ G A+K + S++ F E I+ K
Sbjct: 58 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 117
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKP--LAWTTRVQIALDAA 118
H N++ IG + F++ E G L L + +P LA + +A D A
Sbjct: 118 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 177
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILL---DSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
G +Y+ + +++HRD+ N LL AKI DFG+ + + + ++
Sbjct: 178 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 234
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++ PE +G T+K+D ++FGV+L E+ +
Sbjct: 235 -PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 21/214 (9%)
Query: 13 NFSTSLKIGQGSYGSVYLGKLRGK-------NAAIKQMKNTKSKE----FSSELKILCKV 61
N + +G G++G VY G++ G A+K + S++ F E I+ K
Sbjct: 38 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 97
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKP--LAWTTRVQIALDAA 118
H N++ IG + F++ E G L L + +P LA + +A D A
Sbjct: 98 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 157
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILL---DSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
G +Y+ + +++HRD+ N LL AKI DFG+ + + + ++
Sbjct: 158 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 214
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++ PE +G T+K+D ++FGV+L E+ +
Sbjct: 215 -PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 21/214 (9%)
Query: 13 NFSTSLKIGQGSYGSVYLGKLRGK-------NAAIKQMKNTKSKE----FSSELKILCKV 61
N + +G G++G VY G++ G A+K + S++ F E I+ K
Sbjct: 46 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 105
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKP--LAWTTRVQIALDAA 118
H N++ IG + F++ E G L L + +P LA + +A D A
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILL---DSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
G +Y+ + +++HRD+ N LL AKI DFG+ + + + ++
Sbjct: 166 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 222
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++ PE +G T+K+D ++FGV+L E+ +
Sbjct: 223 -PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 27/251 (10%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKILCKV------ 61
A +F +G+G +G+VYL + + A+K + + ++ E ++ +V
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H N++ L GY ++L+ EYA G + L K K T I + A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYIT-ELANA 120
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L Y H +HRD+K N+LL S KIADFG H+P ++ + + GT Y
Sbjct: 121 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAP--SSRRTDLCGTLDY 172
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF- 239
L PE + K D+++ GV+ E + G+ +AN Y + S V++ F
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETY-KRISRVEFTFPDFV 229
Query: 240 -NDTKDFMAKL 249
+D +++L
Sbjct: 230 TEGARDLISRL 240
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 106/217 (48%), Gaps = 29/217 (13%)
Query: 20 IGQGSYGSVYLGKL---RGK--NAAIKQMKNT----KSKEFSSELKILCKV-HSNLIELI 69
IG+G +G VY G L GK + A+K + + +F +E I+ H N++ L+
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 70 GYAAGGD-SLFLVYEYAQNGALSDHL----HWPSVKGKKPLAWTTRVQIALDAAKGLEYI 124
G + S +V Y ++G L + + H P+VK + L AKG++Y+
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--------DLIGFGLQVAKGMKYL 148
Query: 125 HQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG--YLA 182
+VHRD+ N +LD F K+ADFGL + + + E + ++ ++A
Sbjct: 149 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMA 204
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDAN 219
E ++ TTKSDV++FGV+L EL+T D N
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 241
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 27/251 (10%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKILCKV------ 61
A +F +G+G +G+VYL + + A+K + + ++ E ++ +V
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H N++ L GY ++L+ EYA G + L K K T I + A
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYIT-ELANA 121
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L Y H +HRD+K N+LL S KIADFG H+P ++ + + GT Y
Sbjct: 122 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAP--SSRRTDLCGTLDY 173
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF- 239
L PE + K D+++ GV+ E + G+ +AN Y + S V++ F
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETY-KRISRVEFTFPDFV 230
Query: 240 -NDTKDFMAKL 249
+D +++L
Sbjct: 231 TEGARDLISRL 241
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 106/217 (48%), Gaps = 29/217 (13%)
Query: 20 IGQGSYGSVYLGKL---RGK--NAAIKQMKNT----KSKEFSSELKILCKV-HSNLIELI 69
IG+G +G VY G L GK + A+K + + +F +E I+ H N++ L+
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 70 GYAAGGD-SLFLVYEYAQNGALSDHL----HWPSVKGKKPLAWTTRVQIALDAAKGLEYI 124
G + S +V Y ++G L + + H P+VK + L AKG++Y+
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--------DLIGFGLQVAKGMKYL 144
Query: 125 HQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG--YLA 182
+VHRD+ N +LD F K+ADFGL + + + E + ++ ++A
Sbjct: 145 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMA 200
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDAN 219
E ++ TTKSDV++FGV+L EL+T D N
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 237
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 106/217 (48%), Gaps = 29/217 (13%)
Query: 20 IGQGSYGSVYLGKL---RGK--NAAIKQMKNT----KSKEFSSELKILCKV-HSNLIELI 69
IG+G +G VY G L GK + A+K + + +F +E I+ H N++ L+
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 70 GYAAGGD-SLFLVYEYAQNGALSDHL----HWPSVKGKKPLAWTTRVQIALDAAKGLEYI 124
G + S +V Y ++G L + + H P+VK + L AKG++Y+
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--------DLIGFGLQVAKGMKYL 167
Query: 125 HQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG--YLA 182
+VHRD+ N +LD F K+ADFGL + + + E + ++ ++A
Sbjct: 168 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMA 223
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDAN 219
E ++ TTKSDV++FGV+L EL+T D N
Sbjct: 224 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 260
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 106/217 (48%), Gaps = 29/217 (13%)
Query: 20 IGQGSYGSVYLGKL---RGK--NAAIKQMKNT----KSKEFSSELKILCKV-HSNLIELI 69
IG+G +G VY G L GK + A+K + + +F +E I+ H N++ L+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 70 GYAAGGD-SLFLVYEYAQNGALSDHL----HWPSVKGKKPLAWTTRVQIALDAAKGLEYI 124
G + S +V Y ++G L + + H P+VK + L AKG++Y+
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--------DLIGFGLQVAKGMKYL 149
Query: 125 HQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG--YLA 182
+VHRD+ N +LD F K+ADFGL + + + E + ++ ++A
Sbjct: 150 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMA 205
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDAN 219
E ++ TTKSDV++FGV+L EL+T D N
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 242
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 106/217 (48%), Gaps = 29/217 (13%)
Query: 20 IGQGSYGSVYLGKL---RGK--NAAIKQMKNT----KSKEFSSELKILCKV-HSNLIELI 69
IG+G +G VY G L GK + A+K + + +F +E I+ H N++ L+
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 70 GYAAGGD-SLFLVYEYAQNGALSDHL----HWPSVKGKKPLAWTTRVQIALDAAKGLEYI 124
G + S +V Y ++G L + + H P+VK + L AKG++Y+
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--------DLIGFGLQVAKGMKYL 146
Query: 125 HQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG--YLA 182
+VHRD+ N +LD F K+ADFGL + + + E + ++ ++A
Sbjct: 147 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMA 202
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDAN 219
E ++ TTKSDV++FGV+L EL+T D N
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 239
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 27/251 (10%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKILCKV------ 61
A +F +G+G +G+VYL + + A+K + + ++ E ++ +V
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H N++ L GY ++L+ EYA G + L K K T I + A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYIT-ELANA 120
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L Y H +HRD+K N+LL S KIADFG H+P ++ + + GT Y
Sbjct: 121 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAP--SSRRTXLCGTLDY 172
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF- 239
L PE + K D+++ GV+ E + G+ +AN Y + S V++ F
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETY-KRISRVEFTFPDFV 229
Query: 240 -NDTKDFMAKL 249
+D +++L
Sbjct: 230 TEGARDLISRL 240
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 105/216 (48%), Gaps = 27/216 (12%)
Query: 20 IGQGSYGSVYLGKL---RGK--NAAIKQMKNT----KSKEFSSELKILCKV-HSNLIELI 69
IG+G +G VY G L GK + A+K + + +F +E I+ H N++ L+
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 70 GYAAGGD-SLFLVYEYAQNGALSDHL----HWPSVKGKKPLAWTTRVQIALDAAKGLEYI 124
G + S +V Y ++G L + + H P+VK + L AKG++++
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--------DLIGFGLQVAKGMKFL 150
Query: 125 HQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVK-LLEHSPEIAAAASRIVGTFGYLAP 183
+VHRD+ N +LD F K+ADFGL + +L+ + + ++A
Sbjct: 151 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMAL 207
Query: 184 EYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDAN 219
E ++ TTKSDV++FGV+L EL+T D N
Sbjct: 208 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 243
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 106/217 (48%), Gaps = 29/217 (13%)
Query: 20 IGQGSYGSVYLGKL---RGK--NAAIKQMKNT----KSKEFSSELKILCKV-HSNLIELI 69
IG+G +G VY G L GK + A+K + + +F +E I+ H N++ L+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 70 GYAAGGD-SLFLVYEYAQNGALSDHL----HWPSVKGKKPLAWTTRVQIALDAAKGLEYI 124
G + S +V Y ++G L + + H P+VK + L AKG++Y+
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--------DLIGFGLQVAKGMKYL 149
Query: 125 HQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG--YLA 182
+VHRD+ N +LD F K+ADFGL + + + E + ++ ++A
Sbjct: 150 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMA 205
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDAN 219
E ++ TTKSDV++FGV+L EL+T D N
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 242
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 27/251 (10%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKILCKV------ 61
A +F +G+G +G+VYL + + A+K + + ++ E ++ +V
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H N++ L GY ++L+ EYA G + L K K T I + A
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYIT-ELANA 146
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L Y H +HRD+K N+LL S KIADFG H+P ++ + + GT Y
Sbjct: 147 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAP--SSRRTTLCGTLDY 198
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF- 239
L PE + K D+++ GV+ E + G+ +AN Y + S V++ F
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETY-KRISRVEFTFPDFV 255
Query: 240 -NDTKDFMAKL 249
+D +++L
Sbjct: 256 TEGARDLISRL 266
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 27/251 (10%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKILCKV------ 61
A +F +G+G +G+VYL + + A+K + + ++ E ++ +V
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H N++ L GY ++L+ EYA G + L K K T I + A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYIT-ELANA 120
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L Y H +HRD+K N+LL S KIADFG H+P ++ + + GT Y
Sbjct: 121 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAP--SSRRTDLCGTLDY 172
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF- 239
L PE + K D+++ GV+ E + G+ +AN Y + S V++ F
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETY-KRISRVEFTFPDFV 229
Query: 240 -NDTKDFMAKL 249
+D +++L
Sbjct: 230 TEGARDLISRL 240
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 111/241 (46%), Gaps = 38/241 (15%)
Query: 2 FSYNEVRD-ATSNFSTSLKIGQGSYGSVY------LGKLRGK-NAAIKQMKNT----KSK 49
YNE + +N +G G++G V LGK A+K +K+T + +
Sbjct: 20 LPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKE 79
Query: 50 EFSSELKILCKV--HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLH-------WPSV- 99
SELKI+ + H N++ L+G G + ++ EY G L + L PS+
Sbjct: 80 ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLA 139
Query: 100 ----------KGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFR 149
+ +PL + + A+G+ ++ +HRDV N+LL +
Sbjct: 140 PGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHV 196
Query: 150 AKIADFGLVK-LLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELI 208
AKI DFGL + ++ S I +R+ ++APE + D T +SDV+++G++L E+
Sbjct: 197 AKIGDFGLARDIMNDSNYIVKGNARL--PVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 254
Query: 209 T 209
+
Sbjct: 255 S 255
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 106/217 (48%), Gaps = 29/217 (13%)
Query: 20 IGQGSYGSVYLGKL---RGK--NAAIKQMKNT----KSKEFSSELKILCKV-HSNLIELI 69
IG+G +G VY G L GK + A+K + + +F +E I+ H N++ L+
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 70 GYAAGGD-SLFLVYEYAQNGALSDHL----HWPSVKGKKPLAWTTRVQIALDAAKGLEYI 124
G + S +V Y ++G L + + H P+VK + L AKG++Y+
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--------DLIGFGLQVAKGMKYL 147
Query: 125 HQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG--YLA 182
+VHRD+ N +LD F K+ADFGL + + + E + ++ ++A
Sbjct: 148 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMA 203
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDAN 219
E ++ TTKSDV++FGV+L EL+T D N
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 240
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 29/220 (13%)
Query: 7 VRDATSNFSTSLK----IGQGSYGSVYL--GKLRGKNAAIK-----QMKNTKSKE-FSSE 54
V+ +T+ FS K +G+GS+G V L K+ G+ A+K Q+K KE E
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 55 LKILCKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
+++L ++ H N+++L + +LV E G L D + +K + +I
Sbjct: 77 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDE-----IISRKRFSEVDAARI 131
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFR---AKIADFGLVKLLEHSPEIAAA 170
G+ Y+H K VHRD+K N+LL+S + +I DFGL E S ++
Sbjct: 132 IRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 188
Query: 171 ASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITG 210
+GT Y+APE V G K DV++ GV+L L++G
Sbjct: 189 ----IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 106/217 (48%), Gaps = 29/217 (13%)
Query: 20 IGQGSYGSVYLGKL---RGK--NAAIKQMKNT----KSKEFSSELKILCKV-HSNLIELI 69
IG+G +G VY G L GK + A+K + + +F +E I+ H N++ L+
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 70 GYAAGGD-SLFLVYEYAQNGALSDHL----HWPSVKGKKPLAWTTRVQIALDAAKGLEYI 124
G + S +V Y ++G L + + H P+VK + L AKG++Y+
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--------DLIGFGLQVAKGMKYL 141
Query: 125 HQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG--YLA 182
+VHRD+ N +LD F K+ADFGL + + + E + ++ ++A
Sbjct: 142 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMA 197
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDAN 219
E ++ TTKSDV++FGV+L EL+T D N
Sbjct: 198 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 234
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 27/251 (10%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKILCKV------ 61
A +F +G+G +G+VYL + + A+K + + ++ E ++ +V
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H N++ L GY ++L+ EYA G + L K K T I + A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYIT-ELANA 120
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L Y H +HRD+K N+LL S KIADFG H+P ++ + + GT Y
Sbjct: 121 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAP--SSRRTTLCGTLDY 172
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF- 239
L PE + K D+++ GV+ E + G+ +AN Y + S V++ F
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETY-KRISRVEFTFPDFV 229
Query: 240 -NDTKDFMAKL 249
+D +++L
Sbjct: 230 TEGARDLISRL 240
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 27/251 (10%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKILCKV------ 61
A +F +G+G +G+VYL + + A+K + + ++ E ++ +V
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H N++ L GY ++L+ EYA G + L K K T I + A
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYIT-ELANA 125
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L Y H +HRD+K N+LL S KIADFG H+P ++ + + GT Y
Sbjct: 126 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAP--SSRRTTLCGTLDY 177
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF- 239
L PE + K D+++ GV+ E + G+ +AN Y + S V++ F
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETY-KRISRVEFTFPDFV 234
Query: 240 -NDTKDFMAKL 249
+D +++L
Sbjct: 235 TEGARDLISRL 245
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 27/251 (10%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKILCKV------ 61
A +F +G+G +G+VYL + + A+K + + ++ E ++ +V
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H N++ L GY ++L+ EYA G + L K K T I + A
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYIT-ELANA 119
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L Y H +HRD+K N+LL S KIADFG H+P ++ + + GT Y
Sbjct: 120 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAP--SSRRTTLCGTLDY 171
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF- 239
L PE + K D+++ GV+ E + G+ +AN Y + S V++ F
Sbjct: 172 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETY-KRISRVEFTFPDFV 228
Query: 240 -NDTKDFMAKL 249
+D +++L
Sbjct: 229 TEGARDLISRL 239
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 27/251 (10%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKILCKV------ 61
A +F +G+G +G+VYL + + A+K + + ++ E ++ +V
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H N++ L GY ++L+ EYA G + L K K T I + A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYIT-ELANA 123
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L Y H +HRD+K N+LL S KIADFG H+P ++ + + GT Y
Sbjct: 124 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAP--SSRRTTLCGTLDY 175
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF- 239
L PE + K D+++ GV+ E + G+ +AN Y + S V++ F
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETY-KRISRVEFTFPDFV 232
Query: 240 -NDTKDFMAKL 249
+D +++L
Sbjct: 233 TEGARDLISRL 243
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 27/211 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGK--LRGKNAAIK-----QMKNTKSKEFSSELKILCKV-HS 63
N+ IG+G++ V L + L G+ AIK Q+ T ++ E++I+ + H
Sbjct: 15 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 64 NLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEY 123
N+++L +L+L+ EYA G + D+L + K+ A + QI ++Y
Sbjct: 75 NIVKLFEVIETEKTLYLIMEYASGGEVFDYL-VAHGRMKEKEARSKFRQIV----SAVQY 129
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
HQ VHRD+K N+LLD++ KIADFG + + G Y AP
Sbjct: 130 CHQKR---IVHRDLKAENLLLDADMNIKIADFG----FSNEFTVGGKLDAFCGAPPYAAP 182
Query: 184 EYVR----DGCVTTKSDVYAFGVVLMELITG 210
E + DG + DV++ GV+L L++G
Sbjct: 183 ELFQGKKYDG---PEVDVWSLGVILYTLVSG 210
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 27/251 (10%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKILCKV------ 61
A +F +G+G +G+VYL + + A+K + + ++ E ++ +V
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H N++ L GY ++L+ EYA G + L K K T I + A
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYIT-ELANA 124
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L Y H +HRD+K N+LL S KIADFG H+P ++ + + GT Y
Sbjct: 125 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAP--SSRRTTLCGTLDY 176
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF- 239
L PE + K D+++ GV+ E + G+ +AN Y + S V++ F
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETY-KRISRVEFTFPDFV 233
Query: 240 -NDTKDFMAKL 249
+D +++L
Sbjct: 234 TEGARDLISRL 244
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 21/214 (9%)
Query: 13 NFSTSLKIGQGSYGSVYLGKLRGK-------NAAIKQMKNTKSKE----FSSELKILCKV 61
N + +G G++G VY G++ G A+K + S++ F E I+ K
Sbjct: 46 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKF 105
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKP--LAWTTRVQIALDAA 118
H N++ IG + F++ E G L L + +P LA + +A D A
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILL---DSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
G +Y+ + +++HRD+ N LL AKI DFG+ + + + ++
Sbjct: 166 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 222
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++ PE +G T+K+D ++FGV+L E+ +
Sbjct: 223 -PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 106/217 (48%), Gaps = 29/217 (13%)
Query: 20 IGQGSYGSVYLGKL---RGK--NAAIKQMKNT----KSKEFSSELKILCKV-HSNLIELI 69
IG+G +G VY G L GK + A+K + + +F +E I+ H N++ L+
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 70 GYAAGGD-SLFLVYEYAQNGALSDHL----HWPSVKGKKPLAWTTRVQIALDAAKGLEYI 124
G + S +V Y ++G L + + H P+VK + L AKG++Y+
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--------DLIGFGLQVAKGMKYL 168
Query: 125 HQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG--YLA 182
+VHRD+ N +LD F K+ADFGL + + + E + ++ ++A
Sbjct: 169 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKTGAKLPVKWMA 224
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDAN 219
E ++ TTKSDV++FGV+L EL+T D N
Sbjct: 225 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 261
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 111/233 (47%), Gaps = 27/233 (11%)
Query: 8 RDATSNFSTSLKIGQGSYGSVYLGKL--RGKNAAIKQMKNTKSKEFSS-ELKILCKV-HS 63
R +++ + IG GS+G VY KL G+ AIK++ + K F + EL+I+ K+ H
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--LQDKRFKNRELQIMRKLDHC 73
Query: 64 NLIEL--IGYAAG--GDSLF--LVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
N++ L Y++G D ++ LV +Y H+ K P+ + L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 131
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRA-KIADFGLVK-LLEHSPEIAAAASRIV 175
+ L YIH + HRD+K N+LLD + K+ DFG K L+ P ++ SR
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 187
Query: 176 GTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRDANPGNNQYTE 227
Y APE + T S DV++ G VL EL+ GQ D+ G +Q E
Sbjct: 188 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVE 234
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 111/233 (47%), Gaps = 27/233 (11%)
Query: 8 RDATSNFSTSLKIGQGSYGSVYLGKL--RGKNAAIKQMKNTKSKEFSS-ELKILCKV-HS 63
R +++ + IG GS+G VY KL G+ AIK++ + K F + EL+I+ K+ H
Sbjct: 17 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--LQDKRFKNRELQIMRKLDHC 74
Query: 64 NLIEL--IGYAAG--GDSLF--LVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
N++ L Y++G D ++ LV +Y H+ K P+ + L
Sbjct: 75 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 132
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRA-KIADFGLVK-LLEHSPEIAAAASRIV 175
+ L YIH + HRD+K N+LLD + K+ DFG K L+ P ++ SR
Sbjct: 133 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 188
Query: 176 GTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRDANPGNNQYTE 227
Y APE + T S DV++ G VL EL+ GQ D+ G +Q E
Sbjct: 189 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVE 235
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 21/214 (9%)
Query: 13 NFSTSLKIGQGSYGSVYLGKLRGK-------NAAIKQMKNTKSKE----FSSELKILCKV 61
N + +G G++G VY G++ G A+K + S++ F E I+ K
Sbjct: 32 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 91
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKP--LAWTTRVQIALDAA 118
H N++ IG + F++ E G L L + +P LA + +A D A
Sbjct: 92 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILL---DSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
G +Y+ + +++HRD+ N LL AKI DFG+ + + + ++
Sbjct: 152 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAML 208
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++ PE +G T+K+D ++FGV+L E+ +
Sbjct: 209 -PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 111/251 (44%), Gaps = 27/251 (10%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKILCKV------ 61
A +F +G+G +G+VYL + + A+K + + ++ E ++ +V
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H N++ L GY ++L+ EYA G + L K K T I + A
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYIT-ELANA 122
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L Y H +HRD+K N+LL S KIADFG H+P ++ + GT Y
Sbjct: 123 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAP--SSRRXXLCGTLDY 174
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF- 239
L PE + K D+++ GV+ E + G+ +AN Y + S V++ F
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETY-KRISRVEFTFPDFV 231
Query: 240 -NDTKDFMAKL 249
+D +++L
Sbjct: 232 TEGARDLISRL 242
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 21/214 (9%)
Query: 13 NFSTSLKIGQGSYGSVYLGKLRGK-------NAAIKQMKNTKSKE----FSSELKILCKV 61
N + +G G++G VY G++ G A+K + S++ F E I+ K
Sbjct: 72 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 131
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKP--LAWTTRVQIALDAA 118
H N++ IG + F++ E G L L + +P LA + +A D A
Sbjct: 132 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 191
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILL---DSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
G +Y+ + +++HRD+ N LL AKI DFG+ + + + ++
Sbjct: 192 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAML 248
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++ PE +G T+K+D ++FGV+L E+ +
Sbjct: 249 -PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 98/223 (43%), Gaps = 21/223 (9%)
Query: 3 SYNEVRDATSNFSTSLKIGQGSYGSVYLGKLRG----------KNAAIKQMKNTKSKEFS 52
S N R ++F+ + +G+GS+G V L +G K + Q + +
Sbjct: 10 SNNLDRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVE 69
Query: 53 SELKILCKVHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQ 112
+ L L +L D L+ V EY G L H+ K K+P A +
Sbjct: 70 KRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVG-KFKEPQAVFYAAE 128
Query: 113 IALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAAS 172
I++ GL ++H K ++RD+K N++LDS KIADFG+ K EH +
Sbjct: 129 ISI----GLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMD-GVTTR 178
Query: 173 RIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALS 215
GT Y+APE + D +A+GV+L E++ GQ
Sbjct: 179 EFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 109/233 (46%), Gaps = 27/233 (11%)
Query: 8 RDATSNFSTSLKIGQGSYGSVYLGKL--RGKNAAIKQMKNTKSKEFSS-ELKILCKV-HS 63
R +++ + IG GS+G VY KL G+ AIK++ + K F + EL+I+ K+ H
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--LQDKRFKNRELQIMRKLDHC 73
Query: 64 NLIEL--IGYAAGGDS----LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
N++ L Y++G L LV +Y H+ K P+ + L
Sbjct: 74 NIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 131
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRA-KIADFGLVK-LLEHSPEIAAAASRIV 175
+ L YIH + HRD+K N+LLD + K+ DFG K L+ P ++ SR
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 187
Query: 176 GTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRDANPGNNQYTE 227
Y APE + T S DV++ G VL EL+ GQ D+ G +Q E
Sbjct: 188 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVE 234
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 21/214 (9%)
Query: 13 NFSTSLKIGQGSYGSVYLGKLRGK-------NAAIKQMKNTKSKE----FSSELKILCKV 61
N + +G G++G VY G++ G A+K + S++ F E I+ K
Sbjct: 49 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF 108
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKP--LAWTTRVQIALDAA 118
H N++ IG + F++ E G L L + +P LA + +A D A
Sbjct: 109 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 168
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILL---DSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
G +Y+ + +++HRD+ N LL AKI DFG+ + + + ++
Sbjct: 169 CGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAML 225
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++ PE +G T+K+D ++FGV+L E+ +
Sbjct: 226 -PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 29/220 (13%)
Query: 7 VRDATSNFSTSLK----IGQGSYGSVYL--GKLRGKNAAIK-----QMKNTKSKE-FSSE 54
V+ +T+ FS K +G+GS+G V L K+ G+ A+K Q+K KE E
Sbjct: 23 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 82
Query: 55 LKILCKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
+++L ++ H N+++L + +LV E G L D + +K + +I
Sbjct: 83 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDE-----IISRKRFSEVDAARI 137
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFR---AKIADFGLVKLLEHSPEIAAA 170
G+ Y+H K VHRD+K N+LL+S + +I DFGL E S ++
Sbjct: 138 IRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 194
Query: 171 ASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITG 210
+GT Y+APE V G K DV++ GV+L L++G
Sbjct: 195 ----IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 37/229 (16%)
Query: 13 NFSTSLKIGQGSYGSVYLGK---LRGK----NAAIKQMKNTKS----KEFSSELKILCKV 61
N +G+G +G V L+G+ A+K +K S ++ SE +L +V
Sbjct: 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV 83
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG------------------- 101
H ++I+L G + L L+ EYA+ G+L L G
Sbjct: 84 NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPD 143
Query: 102 KKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVK-L 160
++ L + A ++G++Y+ + VHRD+ NIL+ + KI+DFGL + +
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 161 LEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
E + + RI ++A E + D TT+SDV++FGV+L E++T
Sbjct: 201 YEEDSYVKRSQGRI--PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 27/251 (10%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKILCKV------ 61
A +F +G+G +G+VYL + + A+K + + ++ E ++ +V
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H N++ L GY ++L+ EYA G + L K K T I + A
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYIT-ELANA 125
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L Y H +HRD+K N+LL S KIADFG H+P ++ + + GT Y
Sbjct: 126 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAP--SSRRTDLCGTLDY 177
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF- 239
L PE + K D+++ GV+ E + G+ +AN Y + S V++ F
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETY-KRISRVEFTFPDFV 234
Query: 240 -NDTKDFMAKL 249
+D +++L
Sbjct: 235 TEGARDLISRL 245
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 106/217 (48%), Gaps = 29/217 (13%)
Query: 20 IGQGSYGSVYLGKL---RGK--NAAIKQMKNT----KSKEFSSELKILCKV-HSNLIELI 69
IG+G +G VY G L GK + A+K + + +F +E I+ H N++ L+
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 70 GYAAGGD-SLFLVYEYAQNGALSDHL----HWPSVKGKKPLAWTTRVQIALDAAKGLEYI 124
G + S +V Y ++G L + + H P+VK + L AKG++++
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--------DLIGFGLQVAKGMKFL 147
Query: 125 HQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG--YLA 182
+VHRD+ N +LD F K+ADFGL + + + E + ++ ++A
Sbjct: 148 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEFDSVHNKTGAKLPVKWMA 203
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDAN 219
E ++ TTKSDV++FGV+L EL+T D N
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 240
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 39/228 (17%)
Query: 12 SNFSTSLKIGQGSYGSVYLGK--LRGKNAAIKQMKNTKSK--EFSSELKILCKVH----- 62
S+F +GQG++G V + L + AIK++++T+ K SE+ +L ++
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVV 65
Query: 63 ---------SNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
N ++ + +LF+ EY +N L D +H ++ ++ W QI
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQI 125
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
+ L YIH +HRD+K NI +D + KI DFGL K + S +I S+
Sbjct: 126 L----EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 174 -----------IVGTFGYLAPEYVRDGC--VTTKSDVYAFGVVLMELI 208
+GT Y+A E V DG K D+Y+ G++ E+I
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATE-VLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 109/233 (46%), Gaps = 27/233 (11%)
Query: 8 RDATSNFSTSLKIGQGSYGSVYLGKL--RGKNAAIKQMKNTKSKEFSS-ELKILCKV-HS 63
R +++ + IG GS+G VY KL G+ AIK++ + K F + EL+I+ K+ H
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--LQDKRFKNRELQIMRKLDHC 73
Query: 64 NLIEL--IGYAAGGDS----LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
N++ L Y++G L LV +Y H+ K P+ + L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 131
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRA-KIADFGLVK-LLEHSPEIAAAASRIV 175
+ L YIH + HRD+K N+LLD + K+ DFG K L+ P ++ SR
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 187
Query: 176 GTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRDANPGNNQYTE 227
Y APE + T S DV++ G VL EL+ GQ D+ G +Q E
Sbjct: 188 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVE 234
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 111/251 (44%), Gaps = 27/251 (10%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKILCKV------ 61
A +F +G+G +G+VYL + + A+K + + ++ E ++ +V
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H N++ L GY ++L+ EYA G + L K K T I + A
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYIT-ELANA 121
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L Y H +HRD+K N+LL S KIADFG H+P ++ + GT Y
Sbjct: 122 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAP--SSRRDTLCGTLDY 173
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF- 239
L PE + K D+++ GV+ E + G+ +AN Y + S V++ F
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETY-KRISRVEFTFPDFV 230
Query: 240 -NDTKDFMAKL 249
+D +++L
Sbjct: 231 TEGARDLISRL 241
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 29/212 (13%)
Query: 12 SNFSTSLKIGQGSYGSVYLGK--LRGKNAAIK-----QMKNTKSKEFSSELKILCKV-HS 63
N+ IG+G++ V L + L GK A++ Q+ ++ ++ E++I+ + H
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 64 NLIELIGYAAGGDSLFLVYEYAQNGALSDHL-HWPSVKGKKPLAWTTRVQIALDAAKGLE 122
N+++L +L+LV EYA G + D+L +K K+ A ++ ++
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI------VSAVQ 127
Query: 123 YIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLA 182
Y HQ + VHRD+K N+LLD++ KIADFG ++ G+ Y A
Sbjct: 128 YCHQ---KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT----FCGSPPYAA 180
Query: 183 PEYVR----DGCVTTKSDVYAFGVVLMELITG 210
PE + DG + DV++ GV+L L++G
Sbjct: 181 PELFQGKKYDG---PEVDVWSLGVILYTLVSG 209
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 109/233 (46%), Gaps = 27/233 (11%)
Query: 8 RDATSNFSTSLKIGQGSYGSVYLGKL--RGKNAAIKQMKNTKSKEFSS-ELKILCKV-HS 63
R +++ + IG GS+G VY KL G+ AIK++ + K F + EL+I+ K+ H
Sbjct: 20 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--LQDKRFKNRELQIMRKLDHC 77
Query: 64 NLIEL--IGYAAGGDS----LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
N++ L Y++G L LV +Y H+ K P+ + L
Sbjct: 78 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 135
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRA-KIADFGLVK-LLEHSPEIAAAASRIV 175
+ L YIH + HRD+K N+LLD + K+ DFG K L+ P ++ SR
Sbjct: 136 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 191
Query: 176 GTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRDANPGNNQYTE 227
Y APE + T S DV++ G VL EL+ GQ D+ G +Q E
Sbjct: 192 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVE 238
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 125/286 (43%), Gaps = 44/286 (15%)
Query: 18 LKIGQGSYGSVYLG--KLRGK--NAAIKQMKNTKSK----EFSSELKILCKV-HSNLIEL 68
+++G G++GSV G ++R K + AIK +K K E E +I+ ++ + ++ L
Sbjct: 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL 75
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT 128
IG ++L LV E A G L L V ++ + + ++ + G++Y+ +
Sbjct: 76 IG-VCQAEALMLVMEMAGGGPLHKFL----VGKREEIPVSNVAELLHQVSMGMKYLEEKN 130
Query: 129 KPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRD 188
+VHRD+ N+LL + AKI+DFGL K L A S + APE +
Sbjct: 131 ---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINF 187
Query: 189 GCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDFMA 247
+++SDV+++GV + E ++ GQ+ + P + E
Sbjct: 188 RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ------------------G 229
Query: 248 KLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRL 293
K EC + ++ L DC W+ RPD R+
Sbjct: 230 KRMEC--------PPECPPELYALMSDCWIYKWEDRPDFLTVEQRM 267
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 111/233 (47%), Gaps = 27/233 (11%)
Query: 8 RDATSNFSTSLKIGQGSYGSVYLGKL--RGKNAAIKQMKNTKSKEFSS-ELKILCKV-HS 63
R +++ + IG GS+G VY KL G+ AIK++ + K F + EL+I+ K+ H
Sbjct: 35 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--LQDKRFKNRELQIMRKLDHC 92
Query: 64 NLIEL--IGYAAG--GDSLF--LVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
N++ L Y++G D ++ LV +Y H+ K P+ + L
Sbjct: 93 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 150
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRA-KIADFGLVK-LLEHSPEIAAAASRIV 175
+ L YIH + HRD+K N+LLD + K+ DFG K L+ P ++ SR
Sbjct: 151 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 206
Query: 176 GTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRDANPGNNQYTE 227
Y APE + T S DV++ G VL EL+ GQ D+ G +Q E
Sbjct: 207 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVE 253
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 111/251 (44%), Gaps = 27/251 (10%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKILCKV------ 61
A +F +G+G +G+VYL + + A+K + + ++ E ++ +V
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H N++ L GY ++L+ EYA G + L K K T I + A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYIT-ELANA 123
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L Y H +HRD+K N+LL S KIADFG H+P ++ + GT Y
Sbjct: 124 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAP--SSRRXXLCGTLDY 175
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF- 239
L PE + K D+++ GV+ E + G+ +AN Y + S V++ F
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETY-KRISRVEFTFPDFV 232
Query: 240 -NDTKDFMAKL 249
+D +++L
Sbjct: 233 TEGARDLISRL 243
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 106/217 (48%), Gaps = 29/217 (13%)
Query: 20 IGQGSYGSVYLGKL---RGK--NAAIKQMKNT----KSKEFSSELKILCKV-HSNLIELI 69
IG+G +G VY G L GK + A+K + + +F +E I+ H N++ L+
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 70 GYAAGGD-SLFLVYEYAQNGALSDHL----HWPSVKGKKPLAWTTRVQIALDAAKGLEYI 124
G + S +V Y ++G L + + H P+VK + L AKG++++
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--------DLIGFGLQVAKGMKFL 154
Query: 125 HQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG--YLA 182
+VHRD+ N +LD F K+ADFGL + + + E + ++ ++A
Sbjct: 155 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEFDSVHNKTGAKLPVKWMA 210
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDAN 219
E ++ TTKSDV++FGV+L EL+T D N
Sbjct: 211 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 247
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 27/251 (10%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKILCKV------ 61
A +F +G+G +G+VYL + + A+K + + ++ E ++ +V
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H N++ L GY ++L+ EYA G + L K K T I + A
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYIT-ELANA 125
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L Y H +HRD+K N+LL S KIADFG H+P ++ + + GT Y
Sbjct: 126 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAP--SSRRTTLCGTLDY 177
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF- 239
L PE + K D+++ GV+ E + G+ +AN Y + S V++ F
Sbjct: 178 LPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETY-KRISRVEFTFPDFV 234
Query: 240 -NDTKDFMAKL 249
+D +++L
Sbjct: 235 TEGARDLISRL 245
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 113/251 (45%), Gaps = 29/251 (11%)
Query: 13 NFSTSLKIGQGSYGSVYLGK--LRGKNAAIKQM------KNTKSKEFSSELKILCKV-HS 63
+F +G+GS+ +V L + + AIK + K K + E ++ ++ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 64 NLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEY 123
++L + L+ YA+NG L ++ K TR A + LEY
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIR----KIGSFDETCTRFYTA-EIVSALEY 147
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAA-ASRIVGTFGYLA 182
+H +HRD+K NILL+ + +I DFG K+L SPE A A+ VGT Y++
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL--SPESKQARANSFVGTAQYVS 202
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLV----DYMLAV 238
PE + + + SD++A G ++ +L+ G N+Y + ++ D+
Sbjct: 203 PELLTEKSASKSSDLWALGCIIYQLVAGLPPFR-----AGNEYLIFQKIIKLEYDFPEKF 257
Query: 239 FNDTKDFMAKL 249
F +D + KL
Sbjct: 258 FPKARDLVEKL 268
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 109/233 (46%), Gaps = 27/233 (11%)
Query: 8 RDATSNFSTSLKIGQGSYGSVYLGKL--RGKNAAIKQMKNTKSKEFSS-ELKILCKV-HS 63
R +++ + IG GS+G VY KL G+ AIK++ + K F + EL+I+ K+ H
Sbjct: 24 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--LQDKRFKNRELQIMRKLDHC 81
Query: 64 NLIEL--IGYAAGGDS----LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
N++ L Y++G L LV +Y H+ K P+ + L
Sbjct: 82 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 139
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRA-KIADFGLVK-LLEHSPEIAAAASRIV 175
+ L YIH + HRD+K N+LLD + K+ DFG K L+ P ++ SR
Sbjct: 140 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 195
Query: 176 GTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRDANPGNNQYTE 227
Y APE + T S DV++ G VL EL+ GQ D+ G +Q E
Sbjct: 196 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVE 242
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 109/233 (46%), Gaps = 27/233 (11%)
Query: 8 RDATSNFSTSLKIGQGSYGSVYLGKL--RGKNAAIKQMKNTKSKEFSS-ELKILCKV-HS 63
R +++ + IG GS+G VY KL G+ AIK++ + K F + EL+I+ K+ H
Sbjct: 28 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--LQDKRFKNRELQIMRKLDHC 85
Query: 64 NLIEL--IGYAAGGDS----LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
N++ L Y++G L LV +Y H+ K P+ + L
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 143
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRA-KIADFGLVK-LLEHSPEIAAAASRIV 175
+ L YIH + HRD+K N+LLD + K+ DFG K L+ P ++ SR
Sbjct: 144 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 199
Query: 176 GTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRDANPGNNQYTE 227
Y APE + T S DV++ G VL EL+ GQ D+ G +Q E
Sbjct: 200 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVE 246
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 111/254 (43%), Gaps = 33/254 (12%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKILCKV------ 61
A +F +G+G +G+VYL + + A+K + + ++ E ++ +V
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H N++ L GY ++L+ EYA G + L K K T I + A
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYIT-ELANA 146
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR---IVGT 177
L Y H +HRD+K N+LL S KIADFG + A +SR + GT
Sbjct: 147 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRDDLCGT 195
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLA 237
YL PE + K D+++ GV+ E + G+ +AN Y + S V++
Sbjct: 196 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETY-KRISRVEFTFP 252
Query: 238 VF--NDTKDFMAKL 249
F +D +++L
Sbjct: 253 DFVTEGARDLISRL 266
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 109/232 (46%), Gaps = 25/232 (10%)
Query: 8 RDATSNFSTSLKIGQGSYGSVYLGKL--RGKNAAIKQMKNTKSKEFSSELKILCKV-HSN 64
R +++ + IG GS+G VY KL G+ AIK++ K+ + + EL+I+ K+ H N
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-NRELQIMRKLDHCN 74
Query: 65 LIEL--IGYAAGGDS----LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAA 118
++ L Y++G L LV +Y H+ K P+ + L
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--F 132
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRA-KIADFGLVK-LLEHSPEIAAAASRIVG 176
+ L YIH + HRD+K N+LLD + K+ DFG K L+ P ++ SR
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 187
Query: 177 TFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRDANPGNNQYTE 227
Y APE + T S DV++ G VL EL+ GQ D+ G +Q E
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVE 234
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 106/217 (48%), Gaps = 29/217 (13%)
Query: 20 IGQGSYGSVYLGKL---RGK--NAAIKQMKNT----KSKEFSSELKILCKV-HSNLIELI 69
IG+G +G VY G L GK + A+K + + +F +E I+ H N++ L+
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 70 GYAAGGD-SLFLVYEYAQNGALSDHL----HWPSVKGKKPLAWTTRVQIALDAAKGLEYI 124
G + S +V Y ++G L + + H P+VK + L AKG++++
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--------DLIGFGLQVAKGMKFL 150
Query: 125 HQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG--YLA 182
+VHRD+ N +LD F K+ADFGL + + + E + ++ ++A
Sbjct: 151 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEFDSVHNKTGAKLPVKWMA 206
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDAN 219
E ++ TTKSDV++FGV+L EL+T D N
Sbjct: 207 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 243
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 106/217 (48%), Gaps = 29/217 (13%)
Query: 20 IGQGSYGSVYLGKL---RGK--NAAIKQMKNT----KSKEFSSELKILCKV-HSNLIELI 69
IG+G +G VY G L GK + A+K + + +F +E I+ H N++ L+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 70 GYAAGGD-SLFLVYEYAQNGALSDHL----HWPSVKGKKPLAWTTRVQIALDAAKGLEYI 124
G + S +V Y ++G L + + H P+VK + L AKG++++
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--------DLIGFGLQVAKGMKFL 149
Query: 125 HQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG--YLA 182
+VHRD+ N +LD F K+ADFGL + + + E + ++ ++A
Sbjct: 150 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEFDSVHNKTGAKLPVKWMA 205
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDAN 219
E ++ TTKSDV++FGV+L EL+T D N
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 242
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 111/251 (44%), Gaps = 27/251 (10%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKILCKV------ 61
A +F +G+G +G+VYL + + A+K + + ++ E ++ +V
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H N++ L GY ++L+ EYA G + L K K T I + A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYIT-ELANA 120
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L Y H +HRD+K N+LL S KIADFG H+P ++ + GT Y
Sbjct: 121 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSV---HAP--SSRRXXLCGTLDY 172
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF- 239
L PE + K D+++ GV+ E + G+ +AN Y + S V++ F
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETY-KRISRVEFTFPDFV 229
Query: 240 -NDTKDFMAKL 249
+D +++L
Sbjct: 230 TEGARDLISRL 240
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 106/217 (48%), Gaps = 29/217 (13%)
Query: 20 IGQGSYGSVYLGKL---RGK--NAAIKQMKNT----KSKEFSSELKILCKV-HSNLIELI 69
IG+G +G VY G L GK + A+K + + +F +E I+ H N++ L+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 70 GYAAGGD-SLFLVYEYAQNGALSDHL----HWPSVKGKKPLAWTTRVQIALDAAKGLEYI 124
G + S +V Y ++G L + + H P+VK + L AKG++++
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--------DLIGFGLQVAKGMKFL 149
Query: 125 HQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG--YLA 182
+VHRD+ N +LD F K+ADFGL + + + E + ++ ++A
Sbjct: 150 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEFDSVHNKTGAKLPVKWMA 205
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDAN 219
E ++ TTKSDV++FGV+L EL+T D N
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 242
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 29/252 (11%)
Query: 12 SNFSTSLKIGQGSYGSVYLGK--LRGKNAAIKQM------KNTKSKEFSSELKILCKV-H 62
+F +G+GS+ +V L + + AIK + K K + E ++ ++ H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 63 SNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLE 122
++L + L+ YA+NG L ++ K TR A + LE
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTA-EIVSALE 123
Query: 123 YIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAA-ASRIVGTFGYL 181
Y+H +HRD+K NILL+ + +I DFG K+L SPE A A+ VGT Y+
Sbjct: 124 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL--SPESKQARANXFVGTAQYV 178
Query: 182 APEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLV----DYMLA 237
+PE + + SD++A G ++ +L+ G N+Y + ++ D+
Sbjct: 179 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR-----AGNEYLIFQKIIKLEYDFPEK 233
Query: 238 VFNDTKDFMAKL 249
F +D + KL
Sbjct: 234 FFPKARDLVEKL 245
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 29/252 (11%)
Query: 12 SNFSTSLKIGQGSYGSVYLGK--LRGKNAAIKQM------KNTKSKEFSSELKILCKV-H 62
+F +G+GS+ +V L + + AIK + K K + E ++ ++ H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 63 SNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLE 122
++L + L+ YA+NG L ++ K TR A + LE
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTA-EIVSALE 124
Query: 123 YIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAA-ASRIVGTFGYL 181
Y+H +HRD+K NILL+ + +I DFG K+L SPE A A+ VGT Y+
Sbjct: 125 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL--SPESKQARANXFVGTAQYV 179
Query: 182 APEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLV----DYMLA 237
+PE + + SD++A G ++ +L+ G N+Y + ++ D+
Sbjct: 180 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR-----AGNEYLIFQKIIKLEYDFPEK 234
Query: 238 VFNDTKDFMAKL 249
F +D + KL
Sbjct: 235 FFPKARDLVEKL 246
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 109/232 (46%), Gaps = 25/232 (10%)
Query: 8 RDATSNFSTSLKIGQGSYGSVYLGKL--RGKNAAIKQMKNTKSKEFSSELKILCKV-HSN 64
R +++ + IG GS+G VY KL G+ AIK++ K+ + + EL+I+ K+ H N
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-NRELQIMRKLDHCN 74
Query: 65 LIEL--IGYAAGGDS----LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAA 118
++ L Y++G L LV +Y H+ K P+ + L
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQL--F 132
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRA-KIADFGLVK-LLEHSPEIAAAASRIVG 176
+ L YIH + HRD+K N+LLD + K+ DFG K L+ P ++ SR
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-- 187
Query: 177 TFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRDANPGNNQYTE 227
Y APE + T S DV++ G VL EL+ GQ D+ G +Q E
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVE 234
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 121/242 (50%), Gaps = 35/242 (14%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV- 61
+ NF KIG+G+YG VY KL G+ A+K+++ +T+++ S E+ +L ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 62 HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKG 120
H N+++L+ + L+LV+E+ L D + ++ G PL + Q+ +G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKDFMDASALTGIPLPLIKSYLFQLL----QG 115
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L + H + +HRD+K N+L+++ K+ADFGL + + +V T Y
Sbjct: 116 LAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWY 169
Query: 181 LAPEYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238
APE + GC +T D+++ G + E++T R PG+++ +D + +
Sbjct: 170 RAPEILL-GCKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRI 216
Query: 239 FN 240
F
Sbjct: 217 FR 218
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 29/220 (13%)
Query: 7 VRDATSNFSTSLK----IGQGSYGSVYL--GKLRGKNAAIK-----QMKNTKSKE-FSSE 54
V+ +T+ FS K +G+GS+G V L K+ G+ A+K Q+K KE E
Sbjct: 40 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 99
Query: 55 LKILCKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
+++L ++ H N+++L + +LV E G L D + +K + +I
Sbjct: 100 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDE-----IISRKRFSEVDAARI 154
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFR---AKIADFGLVKLLEHSPEIAAA 170
G+ Y+H K VHRD+K N+LL+S + +I DFGL E S ++
Sbjct: 155 IRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 211
Query: 171 ASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITG 210
+GT Y+APE V G K DV++ GV+L L++G
Sbjct: 212 ----IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 109/233 (46%), Gaps = 27/233 (11%)
Query: 8 RDATSNFSTSLKIGQGSYGSVYLGKL--RGKNAAIKQMKNTKSKEFSS-ELKILCKV-HS 63
R +++ + IG GS+G VY KL G+ AIK++ + K F + EL+I+ K+ H
Sbjct: 28 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--LQDKRFKNRELQIMRKLDHC 85
Query: 64 NLIEL--IGYAAGGDS----LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
N++ L Y++G L LV +Y H+ K P+ + L
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 143
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRA-KIADFGLVK-LLEHSPEIAAAASRIV 175
+ L YIH + HRD+K N+LLD + K+ DFG K L+ P ++ SR
Sbjct: 144 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 199
Query: 176 GTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRDANPGNNQYTE 227
Y APE + T S DV++ G VL EL+ GQ D+ G +Q E
Sbjct: 200 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVE 246
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 111/254 (43%), Gaps = 33/254 (12%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKILCKV------ 61
A +F +G+G +G+VYL + + A+K + + ++ E ++ +V
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H N++ L GY ++L+ EYA G + L K K T I + A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYIT-ELANA 123
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR---IVGT 177
L Y H +HRD+K N+LL S KIADFG + A +SR + GT
Sbjct: 124 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGW--------SVHAPSSRRDDLCGT 172
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLA 237
YL PE + K D+++ GV+ E + G+ +AN Y + S V++
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETY-KRISRVEFTFP 229
Query: 238 VF--NDTKDFMAKL 249
F +D +++L
Sbjct: 230 DFVTEGARDLISRL 243
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 109/233 (46%), Gaps = 27/233 (11%)
Query: 8 RDATSNFSTSLKIGQGSYGSVYLGKL--RGKNAAIKQMKNTKSKEFSS-ELKILCKV-HS 63
R +++ + IG GS+G VY KL G+ AIK++ + K F + EL+I+ K+ H
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--LQDKRFKNRELQIMRKLDHC 73
Query: 64 NLIEL--IGYAAGGDS----LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
N++ L Y++G L LV +Y H+ K P+ + L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 131
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRA-KIADFGLVK-LLEHSPEIAAAASRIV 175
+ L YIH + HRD+K N+LLD + K+ DFG K L+ P ++ SR
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 187
Query: 176 GTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRDANPGNNQYTE 227
Y APE + T S DV++ G VL EL+ GQ D+ G +Q E
Sbjct: 188 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVE 234
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 27/211 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGK--LRGKNAAIK-----QMKNTKSKEFSSELKILCKV-HS 63
N+ IG+G++ V L + L GK A+K Q+ ++ ++ E++I + H
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHP 73
Query: 64 NLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEY 123
N+++L +L+LV EYA G + D+L + K+ A QI ++Y
Sbjct: 74 NIVKLFEVIETEKTLYLVXEYASGGEVFDYL-VAHGRXKEKEARAKFRQIV----SAVQY 128
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
HQ + VHRD+K N+LLD++ KIADFG ++ A G Y AP
Sbjct: 129 CHQ---KFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA----FCGAPPYAAP 181
Query: 184 EYVR----DGCVTTKSDVYAFGVVLMELITG 210
E + DG + DV++ GV+L L++G
Sbjct: 182 ELFQGKKYDG---PEVDVWSLGVILYTLVSG 209
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 111/232 (47%), Gaps = 25/232 (10%)
Query: 8 RDATSNFSTSLKIGQGSYGSVYLGKL--RGKNAAIKQMKNTKSKEFSSELKILCKV-HSN 64
R +++ + IG GS+G VY KL G+ AIK++ K+ + + EL+I+ K+ H N
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-NRELQIMRKLDHCN 74
Query: 65 LIEL--IGYAAG--GDSLF--LVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAA 118
++ L Y++G D ++ LV +Y H+ K P+ + L
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--F 132
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRA-KIADFGLVK-LLEHSPEIAAAASRIVG 176
+ L YIH + HRD+K N+LLD + K+ DFG K L+ P ++ SR
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-- 187
Query: 177 TFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRDANPGNNQYTE 227
Y APE + T S DV++ G VL EL+ GQ D+ G +Q E
Sbjct: 188 ---YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVE 234
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 29/252 (11%)
Query: 12 SNFSTSLKIGQGSYGSVYLGK--LRGKNAAIKQM------KNTKSKEFSSELKILCKV-H 62
+F +G+GS+ +V L + + AIK + K K + E ++ ++ H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 63 SNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLE 122
++L + L+ YA+NG L ++ K TR A + LE
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTA-EIVSALE 121
Query: 123 YIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAA-ASRIVGTFGYL 181
Y+H +HRD+K NILL+ + +I DFG K+L SPE A A+ VGT Y+
Sbjct: 122 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL--SPESKQARANXFVGTAQYV 176
Query: 182 APEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLV----DYMLA 237
+PE + + SD++A G ++ +L+ G N+Y + ++ D+
Sbjct: 177 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR-----AGNEYLIFQKIIKLEYDFPEK 231
Query: 238 VFNDTKDFMAKL 249
F +D + KL
Sbjct: 232 FFPKARDLVEKL 243
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 21/219 (9%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSVYLGKLRGKNA--AIKQMK--------NTKSKEFSSEL 55
+++ +F +G+GS+G V+L + + N AIK +K + + +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 56 KILCKVHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIAL 115
L H L + ++LF V EY G L H ++ + A
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYH-----IQSCHKFDLSRATFYAA 126
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
+ GL+++H V+RD+K NILLD + KIADFG+ K + A +
Sbjct: 127 EIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK---ENMLGDAKTNEFC 180
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQAL 214
GT Y+APE + D ++FGV+L E++ GQ
Sbjct: 181 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 29/252 (11%)
Query: 12 SNFSTSLKIGQGSYGSVYLGK--LRGKNAAIKQM------KNTKSKEFSSELKILCKV-H 62
+F +G+GS+ +V L + + AIK + K K + E ++ ++ H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 63 SNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLE 122
++L + L+ YA+NG L ++ K TR A + LE
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTA-EIVSALE 122
Query: 123 YIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAA-ASRIVGTFGYL 181
Y+H +HRD+K NILL+ + +I DFG K+L SPE A A+ VGT Y+
Sbjct: 123 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL--SPESKQARANXFVGTAQYV 177
Query: 182 APEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLV----DYMLA 237
+PE + + SD++A G ++ +L+ G N+Y + ++ D+
Sbjct: 178 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR-----AGNEYLIFQKIIKLEYDFPEK 232
Query: 238 VFNDTKDFMAKL 249
F +D + KL
Sbjct: 233 FFPKARDLVEKL 244
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 27/251 (10%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKILCKV------ 61
A +F +G+G +G+VYL + + A+K + + ++ E ++ +V
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H N++ L GY ++L+ EYA G + L K K T I + A
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYIT-ELANA 121
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L Y H +HRD+K N+LL S KIADFG H+P ++ + + GT Y
Sbjct: 122 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSC---HAP--SSRRTTLSGTLDY 173
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF- 239
L PE + K D+++ GV+ E + G+ +AN Y + S V++ F
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETY-KRISRVEFTFPDFV 230
Query: 240 -NDTKDFMAKL 249
+D +++L
Sbjct: 231 TEGARDLISRL 241
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 29/220 (13%)
Query: 7 VRDATSNFSTSLK----IGQGSYGSVYL--GKLRGKNAAIK-----QMKNTKSKE-FSSE 54
V+ +T+ FS K +G+GS+G V L K+ G+ A+K Q+K KE E
Sbjct: 41 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 100
Query: 55 LKILCKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
+++L ++ H N+++L + +LV E G L D + +K + +I
Sbjct: 101 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDE-----IISRKRFSEVDAARI 155
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFR---AKIADFGLVKLLEHSPEIAAA 170
G+ Y+H K VHRD+K N+LL+S + +I DFGL E S ++
Sbjct: 156 IRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK 212
Query: 171 ASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITG 210
+GT Y+APE V G K DV++ GV+L L++G
Sbjct: 213 ----IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 106/217 (48%), Gaps = 29/217 (13%)
Query: 20 IGQGSYGSVYLGKL---RGK--NAAIKQMKNT----KSKEFSSELKILCKV-HSNLIELI 69
IG+G +G VY G L GK + A+K + + +F +E I+ H N++ L+
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 70 GYAAGGD-SLFLVYEYAQNGALSDHL----HWPSVKGKKPLAWTTRVQIALDAAKGLEYI 124
G + S +V Y ++G L + + H P+VK + L AKG++++
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--------DLIGFGLQVAKGMKFL 208
Query: 125 HQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG--YLA 182
+VHRD+ N +LD F K+ADFGL + + + E + ++ ++A
Sbjct: 209 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEFDSVHNKTGAKLPVKWMA 264
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDAN 219
E ++ TTKSDV++FGV+L EL+T D N
Sbjct: 265 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 301
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 111/233 (47%), Gaps = 27/233 (11%)
Query: 8 RDATSNFSTSLKIGQGSYGSVYLGKL--RGKNAAIKQMKNTKSKEFSS-ELKILCKV-HS 63
R +++ + IG GS+G VY KL G+ AIK++ + K F + EL+I+ K+ H
Sbjct: 29 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--LQDKRFKNRELQIMRKLDHC 86
Query: 64 NLIEL--IGYAAG--GDSLF--LVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
N++ L Y++G D ++ LV +Y H+ K P+ + L
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 144
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRA-KIADFGLVK-LLEHSPEIAAAASRIV 175
+ L YIH + HRD+K N+LLD + K+ DFG K L+ P ++ SR
Sbjct: 145 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 200
Query: 176 GTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRDANPGNNQYTE 227
Y APE + T S DV++ G VL EL+ GQ D+ G +Q E
Sbjct: 201 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVE 247
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 109/233 (46%), Gaps = 27/233 (11%)
Query: 8 RDATSNFSTSLKIGQGSYGSVYLGKL--RGKNAAIKQMKNTKSKEFSS-ELKILCKV-HS 63
R +++ + IG GS+G VY KL G+ AIK++ + K F + EL+I+ K+ H
Sbjct: 50 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--LQDKRFKNRELQIMRKLDHC 107
Query: 64 NLIEL--IGYAAGGDS----LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
N++ L Y++G L LV +Y H+ K P+ + L
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 165
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRA-KIADFGLVK-LLEHSPEIAAAASRIV 175
+ L YIH + HRD+K N+LLD + K+ DFG K L+ P ++ SR
Sbjct: 166 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 221
Query: 176 GTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRDANPGNNQYTE 227
Y APE + T S DV++ G VL EL+ GQ D+ G +Q E
Sbjct: 222 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVE 268
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 29/252 (11%)
Query: 12 SNFSTSLKIGQGSYGSVYLGK--LRGKNAAIKQM------KNTKSKEFSSELKILCKV-H 62
+F +G+GS+ +V L + + AIK + K K + E ++ ++ H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 63 SNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLE 122
++L + L+ YA+NG L ++ K TR A + LE
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTA-EIVSALE 128
Query: 123 YIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAA-ASRIVGTFGYL 181
Y+H +HRD+K NILL+ + +I DFG K+L SPE A A+ VGT Y+
Sbjct: 129 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL--SPESKQARANXFVGTAQYV 183
Query: 182 APEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLV----DYMLA 237
+PE + + SD++A G ++ +L+ G N+Y + ++ D+
Sbjct: 184 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR-----AGNEYLIFQKIIKLEYDFPEK 238
Query: 238 VFNDTKDFMAKL 249
F +D + KL
Sbjct: 239 FFPKARDLVEKL 250
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 103/216 (47%), Gaps = 30/216 (13%)
Query: 20 IGQGSYGSVYLGKLRGKN---------AAIKQMKNTKSK----EFSSELKILCKV--HSN 64
+G+G++G V + + G + A+K +K+ ++ + SE++++ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-----------KKPLAWTTRVQI 113
+I L+G L+++ YA G L ++L G ++ + + V
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
A+G+EY+ +HRD+ N+L+ N KIADFGL + + + +
Sbjct: 163 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 174 IVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ ++APE + D T +SDV++FGV++ E+ T
Sbjct: 220 RL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 29/252 (11%)
Query: 12 SNFSTSLKIGQGSYGSVYLGK--LRGKNAAIKQM------KNTKSKEFSSELKILCKV-H 62
+F +G+GS+ +V L + + AIK + K K + E ++ ++ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 63 SNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLE 122
++L + L+ YA+NG L ++ K TR A + LE
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTA-EIVSALE 144
Query: 123 YIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAA-ASRIVGTFGYL 181
Y+H +HRD+K NILL+ + +I DFG K+L SPE A A+ VGT Y+
Sbjct: 145 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL--SPESKQARANXFVGTAQYV 199
Query: 182 APEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLV----DYMLA 237
+PE + + SD++A G ++ +L+ G N+Y + ++ D+
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR-----AGNEYLIFQKIIKLEYDFPEK 254
Query: 238 VFNDTKDFMAKL 249
F +D + KL
Sbjct: 255 FFPKARDLVEKL 266
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 133/309 (43%), Gaps = 48/309 (15%)
Query: 9 DATSNFSTSLKIGQGSYGSVYLGK--LRGKNAAIKQMK-----NTKSK-EFSSELKILCK 60
+ +NF KIG+G + VY L G A+K+++ + K++ + E+ +L +
Sbjct: 29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQ 88
Query: 61 V-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHL-HWPSVKGKKP--LAWTTRVQIALD 116
+ H N+I+ + L +V E A G LS + H+ K P W VQ+
Sbjct: 89 LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLC-- 146
Query: 117 AAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVG 176
LE++H +HRD+K +N+ + + K+ D GL + AA +VG
Sbjct: 147 --SALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSSK---TTAAHSLVG 198
Query: 177 TFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYML 236
T Y++PE + + KSD+++ G +L E+ Q D N Y+
Sbjct: 199 TPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---MNLYS---------- 245
Query: 237 AVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMS---NAAIRL 293
K+ +C P L H L+ L C++ + ++RPD++ + A R+
Sbjct: 246 --------LCKKIEQCDYPPLPSDHYSEELRQ--LVNMCINPDPEKRPDVTYVYDVAKRM 295
Query: 294 SHILISSKE 302
SS E
Sbjct: 296 HACTASSLE 304
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 112/251 (44%), Gaps = 29/251 (11%)
Query: 13 NFSTSLKIGQGSYGSVYLGK--LRGKNAAIKQM------KNTKSKEFSSELKILCKV-HS 63
+F +G+GS+ +V L + + AIK + K K + E ++ ++ H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 64 NLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEY 123
++L + L+ YA+NG L ++ K TR A + LEY
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTA-EIVSALEY 145
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAA-ASRIVGTFGYLA 182
+H +HRD+K NILL+ + +I DFG K+L SPE A A+ VGT Y++
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL--SPESKQARANXFVGTAQYVS 200
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLV----DYMLAV 238
PE + + SD++A G ++ +L+ G N+Y + ++ D+
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFR-----AGNEYLIFQKIIKLEYDFPEKF 255
Query: 239 FNDTKDFMAKL 249
F +D + KL
Sbjct: 256 FPKARDLVEKL 266
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 29/252 (11%)
Query: 12 SNFSTSLKIGQGSYGSVYLGK--LRGKNAAIKQM------KNTKSKEFSSELKILCKV-H 62
+F +G+GS+ +V L + + AIK + K K + E ++ ++ H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 63 SNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLE 122
++L + L+ YA+NG L ++ K TR A + LE
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTA-EIVSALE 151
Query: 123 YIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAA-ASRIVGTFGYL 181
Y+H +HRD+K NILL+ + +I DFG K+L SPE A A+ VGT Y+
Sbjct: 152 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL--SPESKQARANXFVGTAQYV 206
Query: 182 APEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLV----DYMLA 237
+PE + + SD++A G ++ +L+ G N+Y + ++ D+
Sbjct: 207 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR-----AGNEYLIFQKIIKLEYDFPEK 261
Query: 238 VFNDTKDFMAKL 249
F +D + KL
Sbjct: 262 FFPKARDLVEKL 273
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 112/251 (44%), Gaps = 29/251 (11%)
Query: 13 NFSTSLKIGQGSYGSVYLGK--LRGKNAAIKQM------KNTKSKEFSSELKILCKV-HS 63
+F +G+GS+ +V L + + AIK + K K + E ++ ++ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 64 NLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEY 123
++L + L+ YA+NG L ++ K TR A + LEY
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTA-EIVSALEY 147
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAA-ASRIVGTFGYLA 182
+H +HRD+K NILL+ + +I DFG K+L SPE A A+ VGT Y++
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL--SPESKQARANXFVGTAQYVS 202
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLV----DYMLAV 238
PE + + SD++A G ++ +L+ G N+Y + ++ D+
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFR-----AGNEYLIFQKIIKLEYDFPEKF 257
Query: 239 FNDTKDFMAKL 249
F +D + KL
Sbjct: 258 FPKARDLVEKL 268
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 111/232 (47%), Gaps = 29/232 (12%)
Query: 2 FSYNEVRD-ATSNFSTSLKIGQGSYGSVY------LGKLRGK-NAAIKQMKNT----KSK 49
YNE + +N +G G++G V LGK A+K +K+T + +
Sbjct: 35 LPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKE 94
Query: 50 EFSSELKILCKV--HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAW 107
SELKI+ + H N++ L+G G + ++ EY G L + L S + A+
Sbjct: 95 ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAF 154
Query: 108 -------TTR--VQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLV 158
+TR + + A+G+ ++ +HRDV N+LL + AKI DFGL
Sbjct: 155 AIANSTLSTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLA 211
Query: 159 K-LLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ ++ S I +R+ ++APE + D T +SDV+++G++L E+ +
Sbjct: 212 RDIMNDSNYIVKGNARL--PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 21/207 (10%)
Query: 20 IGQGSYGSVYLGKLRGKNA-----AIKQMKNTKS-----KEFSSELKILCKV-HSNLIEL 68
+G+G +GSV G L+ ++ A+K MK S +EF SE + H N+I L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 69 IGY-----AAGGDSLFLVYEYAQNGALSDHLHWPSVK-GKKPLAWTTRVQIALDAAKGLE 122
+G + G ++ + + G L +L + ++ G K + T ++ +D A G+E
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 123 YIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLA 182
Y+ ++HRD+ N +L + +ADFGL K + +S + ++A
Sbjct: 162 YLSNRN---FLHRDLAARNCMLRDDMTVCVADFGLSKKI-YSGDYYRQGRIAKMPVKWIA 217
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELIT 209
E + D T+KSDV+AFGV + E+ T
Sbjct: 218 IESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 112/251 (44%), Gaps = 29/251 (11%)
Query: 13 NFSTSLKIGQGSYGSVYLGK--LRGKNAAIKQM------KNTKSKEFSSELKILCKV-HS 63
+F +G+GS+ +V L + + AIK + K K + E ++ ++ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 64 NLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEY 123
++L + L+ YA+NG L ++ K TR A + LEY
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTA-EIVSALEY 147
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAA-ASRIVGTFGYLA 182
+H +HRD+K NILL+ + +I DFG K+L SPE A A+ VGT Y++
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL--SPESKQARANXFVGTAQYVS 202
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLV----DYMLAV 238
PE + + SD++A G ++ +L+ G N+Y + ++ D+
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFR-----AGNEYLIFQKIIKLEYDFPEKF 257
Query: 239 FNDTKDFMAKL 249
F +D + KL
Sbjct: 258 FPKARDLVEKL 268
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 29/252 (11%)
Query: 12 SNFSTSLKIGQGSYGSVYLGK--LRGKNAAIKQM------KNTKSKEFSSELKILCKV-H 62
+F +G+GS+ +V L + + AIK + K K + E ++ ++ H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 63 SNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLE 122
++L + L+ YA+NG L ++ K TR A + LE
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTA-EIVSALE 143
Query: 123 YIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAA-ASRIVGTFGYL 181
Y+H +HRD+K NILL+ + +I DFG K+L SPE A A+ VGT Y+
Sbjct: 144 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL--SPESKQARANXFVGTAQYV 198
Query: 182 APEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLV----DYMLA 237
+PE + + SD++A G ++ +L+ G N+Y + ++ D+
Sbjct: 199 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR-----AGNEYLIFQKIIKLEYDFPEK 253
Query: 238 VFNDTKDFMAKL 249
F +D + KL
Sbjct: 254 FFPKARDLVEKL 265
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 111/233 (47%), Gaps = 27/233 (11%)
Query: 8 RDATSNFSTSLKIGQGSYGSVYLGKL--RGKNAAIKQMKNTKSKEFSS-ELKILCKV-HS 63
R +++ + IG GS+G VY KL G+ AIK++ + K F + EL+I+ K+ H
Sbjct: 44 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--LQDKRFKNRELQIMRKLDHC 101
Query: 64 NLIEL--IGYAAG--GDSLF--LVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
N++ L Y++G D ++ LV +Y H+ K P+ + L
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 159
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRA-KIADFGLVK-LLEHSPEIAAAASRIV 175
+ L YIH + HRD+K N+LLD + K+ DFG K L+ P ++ SR
Sbjct: 160 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 215
Query: 176 GTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRDANPGNNQYTE 227
Y APE + T S DV++ G VL EL+ GQ D+ G +Q E
Sbjct: 216 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVE 262
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 109/233 (46%), Gaps = 27/233 (11%)
Query: 8 RDATSNFSTSLKIGQGSYGSVYLGKL--RGKNAAIKQMKNTKSKEFSS-ELKILCKV-HS 63
R +++ + IG GS+G VY KL G+ AIK++ + K F + EL+I+ K+ H
Sbjct: 21 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--LQDKRFKNRELQIMRKLDHC 78
Query: 64 NLIEL--IGYAAGGDS----LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
N++ L Y++G L LV +Y H+ K P+ + L
Sbjct: 79 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 136
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRA-KIADFGLVK-LLEHSPEIAAAASRIV 175
+ L YIH + HRD+K N+LLD + K+ DFG K L+ P ++ SR
Sbjct: 137 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 192
Query: 176 GTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRDANPGNNQYTE 227
Y APE + T S DV++ G VL EL+ GQ D+ G +Q E
Sbjct: 193 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVE 239
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 112/251 (44%), Gaps = 29/251 (11%)
Query: 13 NFSTSLKIGQGSYGSVYLGK--LRGKNAAIKQM------KNTKSKEFSSELKILCKV-HS 63
+F +G+GS+ +V L + + AIK + K K + E ++ ++ H
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 64 NLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEY 123
++L + L+ YA+NG L ++ K TR A + LEY
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTA-EIVSALEY 148
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAA-ASRIVGTFGYLA 182
+H +HRD+K NILL+ + +I DFG K+L SPE A A+ VGT Y++
Sbjct: 149 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL--SPESKQARANXFVGTAQYVS 203
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLV----DYMLAV 238
PE + + SD++A G ++ +L+ G N+Y + ++ D+
Sbjct: 204 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFR-----AGNEYLIFQKIIKLEYDFPEKF 258
Query: 239 FNDTKDFMAKL 249
F +D + KL
Sbjct: 259 FPKARDLVEKL 269
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 112/251 (44%), Gaps = 29/251 (11%)
Query: 13 NFSTSLKIGQGSYGSVYLGK--LRGKNAAIKQM------KNTKSKEFSSELKILCKV-HS 63
+F +G+GS+ +V L + + AIK + K K + E ++ ++ H
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 64 NLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEY 123
++L + L+ YA+NG L ++ K TR A + LEY
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTA-EIVSALEY 148
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAA-ASRIVGTFGYLA 182
+H +HRD+K NILL+ + +I DFG K+L SPE A A+ VGT Y++
Sbjct: 149 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL--SPESKQARANSFVGTAQYVS 203
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLV----DYMLAV 238
PE + + SD++A G ++ +L+ G N+Y + ++ D+
Sbjct: 204 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFR-----AGNEYLIFQKIIKLEYDFPEKF 258
Query: 239 FNDTKDFMAKL 249
F +D + KL
Sbjct: 259 FPKARDLVEKL 269
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 29/252 (11%)
Query: 12 SNFSTSLKIGQGSYGSVYLGK--LRGKNAAIKQM------KNTKSKEFSSELKILCKV-H 62
+F +G+GS+ +V L + + AIK + K K + E ++ ++ H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 63 SNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLE 122
++L + L+ YA+NG L ++ K TR A + LE
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTA-EIVSALE 143
Query: 123 YIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAA-ASRIVGTFGYL 181
Y+H +HRD+K NILL+ + +I DFG K+L SPE A A+ VGT Y+
Sbjct: 144 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL--SPESKQARANSFVGTAQYV 198
Query: 182 APEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLV----DYMLA 237
+PE + + SD++A G ++ +L+ G N+Y + ++ D+
Sbjct: 199 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR-----AGNEYLIFQKIIKLEYDFPEK 253
Query: 238 VFNDTKDFMAKL 249
F +D + KL
Sbjct: 254 FFPKARDLVEKL 265
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 111/232 (47%), Gaps = 29/232 (12%)
Query: 2 FSYNEVRD-ATSNFSTSLKIGQGSYGSVY------LGKLRGK-NAAIKQMKNT----KSK 49
YNE + +N +G G++G V LGK A+K +K+T + +
Sbjct: 35 LPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKE 94
Query: 50 EFSSELKILCKV--HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAW 107
SELKI+ + H N++ L+G G + ++ EY G L + L S + A+
Sbjct: 95 ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAF 154
Query: 108 -------TTR--VQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLV 158
+TR + + A+G+ ++ +HRDV N+LL + AKI DFGL
Sbjct: 155 AIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLA 211
Query: 159 K-LLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ ++ S I +R+ ++APE + D T +SDV+++G++L E+ +
Sbjct: 212 RDIMNDSNYIVKGNARL--PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 103/216 (47%), Gaps = 30/216 (13%)
Query: 20 IGQGSYGSVYLGKLRGKN---------AAIKQMKNTKSK----EFSSELKILCKV--HSN 64
+G+G++G V + + G + A+K +K+ ++ + SE++++ + H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-----------KKPLAWTTRVQI 113
+I L+G L+++ YA G L ++L G ++ + + V
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
A+G+EY+ +HRD+ N+L+ N KIADFGL + + + +
Sbjct: 163 TYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 174 IVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
+ ++APE + D T +SDV++FGV++ E+ T
Sbjct: 220 RL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 107/226 (47%), Gaps = 29/226 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSVYLGKLRGKNAAI--------KQMKNTKSKEFSSELKI 57
++R +F IG+G++G V + KL+ + + +K ++ F E +
Sbjct: 68 QMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDV 127
Query: 58 LCKVHSNLIELIGYAAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLA--WTTRVQIA 114
L S I + YA D+ L+LV +Y G L L + + +A + + IA
Sbjct: 128 LVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIA 187
Query: 115 LDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFG-LVKLLEHSPEIAAAASR 173
+D+ +HQ +YVHRD+K NIL+D N ++ADFG +KL+E +S
Sbjct: 188 IDS------VHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG---TVQSSV 235
Query: 174 IVGTFGYLAPEYVR-----DGCVTTKSDVYAFGVVLMELITGQQAL 214
VGT Y++PE ++ G + D ++ GV + E++ G+
Sbjct: 236 AVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 112/251 (44%), Gaps = 27/251 (10%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKILCKV------ 61
A +F +G+G +G+VYL + + A+K + + ++ E ++ +V
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H N++ L GY ++L+ EYA G + L K K T I + A
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYIT-ELANA 122
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L Y H +HRD+K N+LL S KIA+FG H+P ++ + + GT Y
Sbjct: 123 LSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSV---HAP--SSRRTTLCGTLDY 174
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF- 239
L PE + K D+++ GV+ E + G+ +AN Y + S V++ F
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETY-KRISRVEFTFPDFV 231
Query: 240 -NDTKDFMAKL 249
+D +++L
Sbjct: 232 TEGARDLISRL 242
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 112/251 (44%), Gaps = 29/251 (11%)
Query: 13 NFSTSLKIGQGSYGSVYLGK--LRGKNAAIKQM------KNTKSKEFSSELKILCKV-HS 63
+F +G+GS+ +V L + + AIK + K K + E ++ ++ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 64 NLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEY 123
++L + L+ YA+NG L ++ K TR A + LEY
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTA-EIVSALEY 147
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAA-ASRIVGTFGYLA 182
+H +HRD+K NILL+ + +I DFG K+L SPE A A+ VGT Y++
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL--SPESKQARANXFVGTAQYVS 202
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLV----DYMLAV 238
PE + + SD++A G ++ +L+ G N+Y + ++ D+
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFR-----AGNEYLIFQKIIKLEYDFPEKF 257
Query: 239 FNDTKDFMAKL 249
F +D + KL
Sbjct: 258 FPKARDLVEKL 268
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 112/251 (44%), Gaps = 27/251 (10%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKILCKV------ 61
A +F +G+G +G+VYL + + A+K + + ++ E ++ +V
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H N++ L GY ++L+ EYA G + L K K T I + A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ----KLSKFDEQRTATYIT-ELANA 123
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L Y H +HRD+K N+LL S KIA+FG H+P ++ + + GT Y
Sbjct: 124 LSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSV---HAP--SSRRTTLCGTLDY 175
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF- 239
L PE + K D+++ GV+ E + G+ +AN Y + S V++ F
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETY-KRISRVEFTFPDFV 232
Query: 240 -NDTKDFMAKL 249
+D +++L
Sbjct: 233 TEGARDLISRL 243
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 109/233 (46%), Gaps = 27/233 (11%)
Query: 8 RDATSNFSTSLKIGQGSYGSVYLGKL--RGKNAAIKQMKNTKSKEFSS-ELKILCKV-HS 63
R +++ + IG GS+G VY KL G+ AIK++ + K F + EL+I+ K+ H
Sbjct: 52 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--LQDKRFKNRELQIMRKLDHC 109
Query: 64 NLIEL--IGYAAGGDS----LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
N++ L Y++G L LV +Y H+ K P+ + L
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 167
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRA-KIADFGLVK-LLEHSPEIAAAASRIV 175
+ L YIH + HRD+K N+LLD + K+ DFG K L+ P ++ SR
Sbjct: 168 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 223
Query: 176 GTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRDANPGNNQYTE 227
Y APE + T S DV++ G VL EL+ GQ D+ G +Q E
Sbjct: 224 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVE 270
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 112/251 (44%), Gaps = 29/251 (11%)
Query: 13 NFSTSLKIGQGSYGSVYLGK--LRGKNAAIKQM------KNTKSKEFSSELKILCKV-HS 63
+F +G+GS+ +V L + + AIK + K K + E ++ ++ H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 64 NLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEY 123
++L + L+ YA+NG L ++ K TR A + LEY
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTA-EIVSALEY 145
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAA-ASRIVGTFGYLA 182
+H +HRD+K NILL+ + +I DFG K+L SPE A A+ VGT Y++
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL--SPESKQARANAFVGTAQYVS 200
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLV----DYMLAV 238
PE + + SD++A G ++ +L+ G N+Y + ++ D+
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFR-----AGNEYLIFQKIIKLEYDFPEKF 255
Query: 239 FNDTKDFMAKL 249
F +D + KL
Sbjct: 256 FPKARDLVEKL 266
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 24/211 (11%)
Query: 12 SNFSTSLKIGQGSYGSVYL-GKLRGKNA----AIKQMKNTKSK-----EFSSELKILCKV 61
S F +GQGS+G V+L K+ G +A A+K +K K E IL +V
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 62 HSNLIELIGYAAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIAL-DAAK 119
+ I + YA + L+L+ ++ + G L L K+ + V+ L + A
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL------SKEVMFTEEDVKFYLAELAL 137
Query: 120 GLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG 179
L+++H ++RD+K NILLD K+ DFGL K S + A GT
Sbjct: 138 ALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVE 191
Query: 180 YLAPEYVRDGCVTTKSDVYAFGVVLMELITG 210
Y+APE V T +D ++FGV++ E++TG
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 109/233 (46%), Gaps = 27/233 (11%)
Query: 8 RDATSNFSTSLKIGQGSYGSVYLGKL--RGKNAAIKQMKNTKSKEFSS-ELKILCKV-HS 63
R +++ + IG GS+G VY KL G+ AIK++ + K F + EL+I+ K+ H
Sbjct: 50 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--LQDKRFKNRELQIMRKLDHC 107
Query: 64 NLIEL--IGYAAGGDS----LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
N++ L Y++G L LV +Y H+ K P+ + L
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 165
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRA-KIADFGLVK-LLEHSPEIAAAASRIV 175
+ L YIH + HRD+K N+LLD + K+ DFG K L+ P ++ SR
Sbjct: 166 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 221
Query: 176 GTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRDANPGNNQYTE 227
Y APE + T S DV++ G VL EL+ GQ D+ G +Q E
Sbjct: 222 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVE 268
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 24/211 (11%)
Query: 12 SNFSTSLKIGQGSYGSVYL-GKLRGKNA----AIKQMKNTKSK-----EFSSELKILCKV 61
S F +GQGS+G V+L K+ G +A A+K +K K E IL +V
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 62 HSNLIELIGYAAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIAL-DAAK 119
+ I + YA + L+L+ ++ + G L L K+ + V+ L + A
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL------SKEVMFTEEDVKFYLAELAL 138
Query: 120 GLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG 179
L+++H ++RD+K NILLD K+ DFGL K S + A GT
Sbjct: 139 ALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVE 192
Query: 180 YLAPEYVRDGCVTTKSDVYAFGVVLMELITG 210
Y+APE V T +D ++FGV++ E++TG
Sbjct: 193 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 24/211 (11%)
Query: 12 SNFSTSLKIGQGSYGSVYL-GKLRGKNA----AIKQMKNTKSK-----EFSSELKILCKV 61
S F +GQGS+G V+L K+ G +A A+K +K K E IL +V
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 62 HSNLIELIGYAAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIAL-DAAK 119
+ I + YA + L+L+ ++ + G L L K+ + V+ L + A
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL------SKEVMFTEEDVKFYLAELAL 137
Query: 120 GLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG 179
L+++H ++RD+K NILLD K+ DFGL K S + A GT
Sbjct: 138 ALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVE 191
Query: 180 YLAPEYVRDGCVTTKSDVYAFGVVLMELITG 210
Y+APE V T +D ++FGV++ E++TG
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 21/219 (9%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSVYLGKLRGKNA--AIKQMK--------NTKSKEFSSEL 55
+++ +F +G+GS+G V+L + + N AIK +K + + +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 56 KILCKVHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIAL 115
L H L + ++LF V EY G L H ++ + A
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYH-----IQSCHKFDLSRATFYAA 125
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
+ GL+++H V+RD+K NILLD + KIADFG+ K + A +
Sbjct: 126 EIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK---ENMLGDAKTNXFC 179
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQAL 214
GT Y+APE + D ++FGV+L E++ GQ
Sbjct: 180 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 121/242 (50%), Gaps = 35/242 (14%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV- 61
+ NF KIG+G+YG VY KL G+ A+K+++ +T+++ S E+ +L ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 62 HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKG 120
H N+++L+ + L+LV+E+ L D + ++ G PL + Q+ +G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALTGIPLPLIKSYLFQLL----QG 118
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L + H + +HRD+K N+L+++ K+ADFGL + + +V T Y
Sbjct: 119 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWY 172
Query: 181 LAPEYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238
APE + GC +T D+++ G + E++T R PG+++ +D + +
Sbjct: 173 RAPEILL-GCKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRI 219
Query: 239 FN 240
F
Sbjct: 220 FR 221
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 111/233 (47%), Gaps = 27/233 (11%)
Query: 8 RDATSNFSTSLKIGQGSYGSVYLGKL--RGKNAAIKQMKNTKSKEFSS-ELKILCKV-HS 63
R +++ + IG GS+G VY KL G+ AIK++ + K F + EL+I+ K+ H
Sbjct: 95 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--LQDKRFKNRELQIMRKLDHC 152
Query: 64 NLIEL--IGYAAG--GDSLF--LVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
N++ L Y++G D ++ LV +Y H+ K P+ + L
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 210
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRA-KIADFGLVK-LLEHSPEIAAAASRIV 175
+ L YIH + HRD+K N+LLD + K+ DFG K L+ P ++ SR
Sbjct: 211 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 266
Query: 176 GTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRDANPGNNQYTE 227
Y APE + T S DV++ G VL EL+ GQ D+ G +Q E
Sbjct: 267 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVE 313
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 109/233 (46%), Gaps = 27/233 (11%)
Query: 8 RDATSNFSTSLKIGQGSYGSVYLGKL--RGKNAAIKQMKNTKSKEFSS-ELKILCKV-HS 63
R +++ + IG GS+G VY KL G+ AIK++ + K F + EL+I+ K+ H
Sbjct: 54 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV--LQDKRFKNRELQIMRKLDHC 111
Query: 64 NLIEL--IGYAAGGDS----LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
N++ L Y++G L LV +Y H+ K P+ + L
Sbjct: 112 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 169
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRA-KIADFGLVK-LLEHSPEIAAAASRIV 175
+ L YIH + HRD+K N+LLD + K+ DFG K L+ P ++ SR
Sbjct: 170 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 225
Query: 176 GTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRDANPGNNQYTE 227
Y APE + T S DV++ G VL EL+ GQ D+ G +Q E
Sbjct: 226 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVE 272
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 123/273 (45%), Gaps = 34/273 (12%)
Query: 34 RGKNAAIKQMK----NTKSKEFSSELKILCKVH-SNLIELIGYAAGGDSLFLVYEYAQNG 88
+ + AIK++ T E E++ + + H N++ D L+LV + G
Sbjct: 39 KKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGG 98
Query: 89 ALSDHLHWPSVKGKKP---LAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLD 145
++ D + KG+ L +T I + +GLEY+H+ + +HRDVK NILL
Sbjct: 99 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLG 155
Query: 146 SNFRAKIADFGLVKLLEHSPEIAAAASR--IVGTFGYLAPEYVRD-GCVTTKSDVYAFGV 202
+ +IADFG+ L +I R VGT ++APE + K+D+++FG+
Sbjct: 156 EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGI 215
Query: 203 VLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHK 262
+EL TG A P Y ++ + ML + ND T D + + +
Sbjct: 216 TAIELATG-------AAP----YHKYPPMKVLMLTLQNDPPSLE---TGVQDKEMLKKYG 261
Query: 263 DSMLQMALLSKDCVDENWKRRPDMSNAAIRLSH 295
S +M L C+ ++ ++RP AA L H
Sbjct: 262 KSFRKMISL---CLQKDPEKRP---TAAELLRH 288
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 121/242 (50%), Gaps = 35/242 (14%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV- 61
+ NF KIG+G+YG VY KL G+ A+K+++ +T+++ S E+ +L ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 62 HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKG 120
H N+++L+ + L+LV+E+ L D + ++ G PL + Q+ +G
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALTGIPLPLIKSYLFQLL----QG 117
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L + H + +HRD+K N+L+++ K+ADFGL + + +V T Y
Sbjct: 118 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWY 171
Query: 181 LAPEYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238
APE + GC +T D+++ G + E++T R PG+++ +D + +
Sbjct: 172 RAPEILL-GCKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRI 218
Query: 239 FN 240
F
Sbjct: 219 FR 220
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 103/217 (47%), Gaps = 29/217 (13%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIKQM-----KNTKSKEFSSELKILCKV-HSNLIELIGY 71
+G+GS+G V K R + A+K + KN + E+++L K+ H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 72 AAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPY 131
S ++V E G L D + +K + +I G+ Y+H++
Sbjct: 90 LEDSSSFYIVGELYTGGELFDE-----IIKRKRFSEHDAARIIKQVFSGITYMHKHN--- 141
Query: 132 YVHRDVKTSNILLDSNFR---AKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRD 188
VHRD+K NILL+S + KI DFGL + + ++ +GT Y+APE +R
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR----IGTAYYIAPEVLR- 196
Query: 189 GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQY 225
G K DV++ GV+L L++G G N+Y
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFY-----GKNEY 228
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQMKNTKSKEFSSELKILCKV-----HSNLIELIGYA 72
+G+G+YG V L ++ + A+K + ++ + +K + H N+++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
G+ +L EY G L D + P + +P A Q+ G+ Y+H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLM----AGVVYLHGIG---I 125
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV-RDGCV 191
HRD+K N+LLD KI+DFGL + ++ +++ GT Y+APE + R
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYN-NRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 192 TTKSDVYAFGVVLMELITGQ 211
DV++ G+VL ++ G+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 22/203 (10%)
Query: 20 IGQGSYGSVYL------GKLRGKNAAIKQMKNTKSKEFSS----ELKILCKV-HSNLIEL 68
+G+G +G V L G+ A+K +K + S E+ IL + H ++I+
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 69 IGYA--AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ 126
G G SL LV EY G+L D+L S+ + L + ++ +G+ Y+H
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQI------CEGMAYLHS 135
Query: 127 YTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV 186
+Y+HR++ N+LLD++ KI DFGL K + E + APE +
Sbjct: 136 Q---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 192
Query: 187 RDGCVTTKSDVYAFGVVLMELIT 209
++ SDV++FGV L EL+T
Sbjct: 193 KEYKFYYASDVWSFGVTLYELLT 215
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQMKNTKSKEFSSELKILCKV-----HSNLIELIGYA 72
+G+G+YG V L ++ + A+K + ++ + +K + H N+++ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
G+ +L EY G L D + P + +P A Q+ G+ Y+H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLM----AGVVYLHGIG---I 126
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV-RDGCV 191
HRD+K N+LLD KI+DFGL + ++ +++ GT Y+APE + R
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYN-NRERLLNKMXGTLPYVAPELLKRREFH 185
Query: 192 TTKSDVYAFGVVLMELITGQ 211
DV++ G+VL ++ G+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGE 205
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 123/273 (45%), Gaps = 34/273 (12%)
Query: 34 RGKNAAIKQMK----NTKSKEFSSELKILCKVH-SNLIELIGYAAGGDSLFLVYEYAQNG 88
+ + AIK++ T E E++ + + H N++ D L+LV + G
Sbjct: 34 KKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGG 93
Query: 89 ALSDHLHWPSVKGKKP---LAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLD 145
++ D + KG+ L +T I + +GLEY+H+ + +HRDVK NILL
Sbjct: 94 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLG 150
Query: 146 SNFRAKIADFGLVKLLEHSPEIAAAASR--IVGTFGYLAPEYVRD-GCVTTKSDVYAFGV 202
+ +IADFG+ L +I R VGT ++APE + K+D+++FG+
Sbjct: 151 EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGI 210
Query: 203 VLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHK 262
+EL TG A P Y ++ + ML + ND T D + + +
Sbjct: 211 TAIELATG-------AAP----YHKYPPMKVLMLTLQNDPPSLE---TGVQDKEMLKKYG 256
Query: 263 DSMLQMALLSKDCVDENWKRRPDMSNAAIRLSH 295
S +M L C+ ++ ++RP AA L H
Sbjct: 257 KSFRKMISL---CLQKDPEKRP---TAAELLRH 283
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 103/217 (47%), Gaps = 29/217 (13%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIKQM-----KNTKSKEFSSELKILCKV-HSNLIELIGY 71
+G+GS+G V K R + A+K + KN + E+++L K+ H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 72 AAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPY 131
S ++V E G L D + +K + +I G+ Y+H++
Sbjct: 90 LEDSSSFYIVGELYTGGELFDE-----IIKRKRFSEHDAARIIKQVFSGITYMHKHN--- 141
Query: 132 YVHRDVKTSNILLDSNFR---AKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRD 188
VHRD+K NILL+S + KI DFGL + + ++ +GT Y+APE +R
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR----IGTAYYIAPEVLR- 196
Query: 189 GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQY 225
G K DV++ GV+L L++G G N+Y
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFY-----GKNEY 228
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 103/217 (47%), Gaps = 29/217 (13%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIKQM-----KNTKSKEFSSELKILCKV-HSNLIELIGY 71
+G+GS+G V K R + A+K + KN + E+++L K+ H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 72 AAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPY 131
S ++V E G L D + +K + +I G+ Y+H++
Sbjct: 90 LEDSSSFYIVGELYTGGELFDE-----IIKRKRFSEHDAARIIKQVFSGITYMHKHN--- 141
Query: 132 YVHRDVKTSNILLDSNFR---AKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRD 188
VHRD+K NILL+S + KI DFGL + + ++ +GT Y+APE +R
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR----IGTAYYIAPEVLR- 196
Query: 189 GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQY 225
G K DV++ GV+L L++G G N+Y
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFY-----GKNEY 228
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 125/286 (43%), Gaps = 44/286 (15%)
Query: 18 LKIGQGSYGSVYLG--KLRGK--NAAIKQMKNTKSK----EFSSELKILCKVHSN-LIEL 68
+++G G++GSV G ++R K + AIK +K K E E +I+ ++ + ++ L
Sbjct: 342 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL 401
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT 128
IG ++L LV E A G L L V ++ + + ++ + G++Y+ +
Sbjct: 402 IG-VCQAEALMLVMEMAGGGPLHKFL----VGKREEIPVSNVAELLHQVSMGMKYLEEKN 456
Query: 129 KPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRD 188
+VHR++ N+LL + AKI+DFGL K L A S + APE +
Sbjct: 457 ---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINF 513
Query: 189 GCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDFMA 247
+++SDV+++GV + E ++ GQ+ + P + E
Sbjct: 514 RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ------------------G 555
Query: 248 KLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRL 293
K EC + ++ L DC W+ RPD R+
Sbjct: 556 KRMEC--------PPECPPELYALMSDCWIYKWEDRPDFLTVEQRM 593
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQMKNTKSKEFSSELKILCKV-----HSNLIELIGYA 72
+G+G+YG V L ++ + A+K + ++ + +K + H N+++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
G+ +L EY G L D + P + +P A Q+ G+ Y+H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLM----AGVVYLHGIG---I 125
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV-RDGCV 191
HRD+K N+LLD KI+DFGL + ++ +++ GT Y+APE + R
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYN-NRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 192 TTKSDVYAFGVVLMELITGQ 211
DV++ G+VL ++ G+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQMKNTKSKEFSSELKILCKV-----HSNLIELIGYA 72
+G+G+YG V L ++ + A+K + ++ + +K + H N+++ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
G+ +L EY G L D + P + +P A Q+ G+ Y+H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLM----AGVVYLHGIG---I 126
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV-RDGCV 191
HRD+K N+LLD KI+DFGL + ++ +++ GT Y+APE + R
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPELLKRREFH 185
Query: 192 TTKSDVYAFGVVLMELITGQ 211
DV++ G+VL ++ G+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGE 205
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 22/203 (10%)
Query: 20 IGQGSYGSVYL------GKLRGKNAAIKQMKNTKSKEFSS----ELKILCKV-HSNLIEL 68
+G+G +G V L G+ A+K +K + S E+ IL + H ++I+
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 69 IGYA--AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ 126
G G SL LV EY G+L D+L S+ + L + ++ +G+ Y+H
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQI------CEGMAYLHA 135
Query: 127 YTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV 186
+Y+HR++ N+LLD++ KI DFGL K + E + APE +
Sbjct: 136 Q---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 192
Query: 187 RDGCVTTKSDVYAFGVVLMELIT 209
++ SDV++FGV L EL+T
Sbjct: 193 KEYKFYYASDVWSFGVTLYELLT 215
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQMKNTKSKEFSSELKILCKV-----HSNLIELIGYA 72
+G+G+YG V L ++ + A+K + ++ + +K + H N+++ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
G+ +L EY G L D + P + +P A Q+ G+ Y+H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLM----AGVVYLHGIG---I 126
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV-RDGCV 191
HRD+K N+LLD KI+DFGL + ++ +++ GT Y+APE + R
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYN-NRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 192 TTKSDVYAFGVVLMELITGQ 211
DV++ G+VL ++ G+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGE 205
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQMKNTKSKEFSSELKILCKV-----HSNLIELIGYA 72
+G+G+YG V L ++ + A+K + ++ + +K + H N+++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
G+ +L EY G L D + P + +P A Q+ G+ Y+H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLM----AGVVYLHGIG---I 125
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV-RDGCV 191
HRD+K N+LLD KI+DFGL + ++ +++ GT Y+APE + R
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPELLKRREFH 184
Query: 192 TTKSDVYAFGVVLMELITGQ 211
DV++ G+VL ++ G+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQMKNTKSKEFSSELKILCKV-----HSNLIELIGYA 72
+G+G+YG V L ++ + A+K + ++ + +K + H N+++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
G+ +L EY G L D + P + +P A Q+ G+ Y+H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLM----AGVVYLHGIG---I 125
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV-RDGCV 191
HRD+K N+LLD KI+DFGL + ++ +++ GT Y+APE + R
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPELLKRREFH 184
Query: 192 TTKSDVYAFGVVLMELITGQ 211
DV++ G+VL ++ G+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQMKNTKSKEFSSELKILCKV-----HSNLIELIGYA 72
+G+G+YG V L ++ + A+K + ++ + +K + H N+++ G+
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
G+ +L EY G L D + P + +P A Q+ G+ Y+H
Sbjct: 73 REGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLM----AGVVYLHGIG---I 124
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV-RDGCV 191
HRD+K N+LLD KI+DFGL + ++ +++ GT Y+APE + R
Sbjct: 125 THRDIKPENLLLDERDNLKISDFGLATVFRYN-NRERLLNKMCGTLPYVAPELLKRREFH 183
Query: 192 TTKSDVYAFGVVLMELITGQ 211
DV++ G+VL ++ G+
Sbjct: 184 AEPVDVWSCGIVLTAMLAGE 203
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQMKNTKSKEFSSELKILCKV-----HSNLIELIGYA 72
+G+G+YG V L ++ + A+K + ++ + +K + H N+++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
G+ +L EY G L D + P + +P A Q+ G+ Y+H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLM----AGVVYLHGIG---I 125
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV-RDGCV 191
HRD+K N+LLD KI+DFGL + ++ +++ GT Y+APE + R
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPELLKRREFH 184
Query: 192 TTKSDVYAFGVVLMELITGQ 211
DV++ G+VL ++ G+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 20/211 (9%)
Query: 8 RDATSNF-STSLKIGQGSYGSVYLGKLRG--KNAAIKQMKNTKSKEF-SSELKILCKV-H 62
RDA S+F ++G+G+ VY K +G K A+K +K T K+ +E+ +L ++ H
Sbjct: 48 RDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSH 107
Query: 63 SNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLE 122
N+I+L + LV E G L D + ++ A V+ L+A +
Sbjct: 108 PNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAA--DAVKQILEA---VA 162
Query: 123 YIHQYTKPYYVHRDVKTSNILLDS---NFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG 179
Y+H+ VHRD+K N+L + + KIADFGL K++EH + GT G
Sbjct: 163 YLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ----VLMKTVCGTPG 215
Query: 180 YLAPEYVRDGCVTTKSDVYAFGVVLMELITG 210
Y APE +R + D+++ G++ L+ G
Sbjct: 216 YCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 111/251 (44%), Gaps = 29/251 (11%)
Query: 13 NFSTSLKIGQGSYGSVYLGK--LRGKNAAIKQM------KNTKSKEFSSELKILCKV-HS 63
+F +G+GS+ + L + + AIK + K K + E ++ ++ H
Sbjct: 31 DFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 64 NLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEY 123
++L + L+ YA+NG L ++ K TR A + LEY
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTA-EIVSALEY 145
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAA-ASRIVGTFGYLA 182
+H +HRD+K NILL+ + +I DFG K+L SPE A A+ VGT Y++
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL--SPESKQARANXFVGTAQYVS 200
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLV----DYMLAV 238
PE + + SD++A G ++ +L+ G N+Y + ++ D+
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFR-----AGNEYLIFQKIIKLEYDFPEKF 255
Query: 239 FNDTKDFMAKL 249
F +D + KL
Sbjct: 256 FPKARDLVEKL 266
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQMKNTKSKEFSSELKILCKV-----HSNLIELIGYA 72
+G+G+YG V L ++ + A+K + ++ + +K + H N+++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
G+ +L EY G L D + P + +P A Q+ G+ Y+H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLM----AGVVYLHGIG---I 125
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV-RDGCV 191
HRD+K N+LLD KI+DFGL + ++ +++ GT Y+APE + R
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPELLKRREFH 184
Query: 192 TTKSDVYAFGVVLMELITGQ 211
DV++ G+VL ++ G+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQMKNTKSKEFSSELKILCKV-----HSNLIELIGYA 72
+G+G+YG V L ++ + A+K + ++ + +K + H N+++ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
G+ +L EY G L D + P + +P A Q+ G+ Y+H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLM----AGVVYLHGIG---I 126
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV-RDGCV 191
HRD+K N+LLD KI+DFGL + ++ +++ GT Y+APE + R
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMCGTLPYVAPELLKRREFH 185
Query: 192 TTKSDVYAFGVVLMELITGQ 211
DV++ G+VL ++ G+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGE 205
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQMKNTKSKEFSSELKILCKV-----HSNLIELIGYA 72
+G+G+YG V L ++ + A+K + ++ + +K + H N+++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
G+ +L EY G L D + P + +P A Q+ G+ Y+H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLM----AGVVYLHGIG---I 125
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV-RDGCV 191
HRD+K N+LLD KI+DFGL + ++ +++ GT Y+APE + R
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYN-NRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 192 TTKSDVYAFGVVLMELITGQ 211
DV++ G+VL ++ G+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQMKNTKSKEFSSELKILCKV-----HSNLIELIGYA 72
+G+G+YG V L ++ + A+K + ++ + +K + H N+++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
G+ +L EY G L D + P + +P A Q+ G+ Y+H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLM----AGVVYLHGIG---I 125
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV-RDGCV 191
HRD+K N+LLD KI+DFGL + ++ +++ GT Y+APE + R
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNR-ERLLNKMXGTLPYVAPELLKRREFH 184
Query: 192 TTKSDVYAFGVVLMELITGQ 211
DV++ G+VL ++ G+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 118/239 (49%), Gaps = 35/239 (14%)
Query: 13 NFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV-HSN 64
NF KIG+G+YG VY KL G+ A+K+++ +T+++ S E+ +L ++ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKGLEY 123
+++L+ + L+LV+E+ L + ++ G PL + Q+ +GL +
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLL----QGLSF 118
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
H + +HRD+K N+L+++ K+ADFGL + + V T Y AP
Sbjct: 119 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYTHEVVTLWYRAP 172
Query: 184 EYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240
E + GC +T D+++ G + E++T R PG+++ +D + +F
Sbjct: 173 EILL-GCKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRIFR 218
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 118/239 (49%), Gaps = 35/239 (14%)
Query: 13 NFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV-HSN 64
NF KIG+G+YG VY KL G+ A+K+++ +T+++ S E+ +L ++ H N
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKGLEY 123
+++L+ + L+LV+E+ L + ++ G PL + Q+ +GL +
Sbjct: 68 IVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLL----QGLAF 122
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
H + +HRD+K N+L+++ K+ADFGL + + V T Y AP
Sbjct: 123 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYTHEVVTLWYRAP 176
Query: 184 EYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240
E + GC +T D+++ G + E++T R PG+++ +D + +F
Sbjct: 177 EILL-GCKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRIFR 222
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 93/211 (44%), Gaps = 25/211 (11%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKNA--AIKQM------KNTKSKEFSSELKILCK--V 61
S+F IG+GS+G V L + + + A+K + K + K SE +L K
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 62 HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI-ALDAAKG 120
H L+ L D L+ V +Y G L HL ++ R + A + A
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQ------RERCFLEPRARFYAAEIASA 151
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKL-LEHSPEIAAAASRIVGTFG 179
L Y+H V+RD+K NILLDS + DFGL K +EH+ + S GT
Sbjct: 152 LGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN----STTSTFCGTPE 204
Query: 180 YLAPEYVRDGCVTTKSDVYAFGVVLMELITG 210
YLAPE + D + G VL E++ G
Sbjct: 205 YLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 118/239 (49%), Gaps = 35/239 (14%)
Query: 13 NFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV-HSN 64
NF KIG+G+YG VY KL G+ A+K+++ +T+++ S E+ +L ++ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKGLEY 123
+++L+ + L+LV+E+ L + ++ G PL + Q+ +GL +
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLL----QGLAF 118
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
H + +HRD+K N+L+++ K+ADFGL + + V T Y AP
Sbjct: 119 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYTHEVVTLWYRAP 172
Query: 184 EYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240
E + GC +T D+++ G + E++T R PG+++ +D + +F
Sbjct: 173 EILL-GCKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRIFR 218
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQMKNTKSKEFSSELKILCKV-----HSNLIELIGYA 72
+G+G+YG V L ++ + A+K + ++ + +K + H N+++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
G+ +L EY G L D + P + +P A Q+ G+ Y+H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLM----AGVVYLHGIG---I 125
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV-RDGCV 191
HRD+K N+LLD KI+DFGL + ++ +++ GT Y+APE + R
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYN-NRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 192 TTKSDVYAFGVVLMELITGQ 211
DV++ G+VL ++ G+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 118/239 (49%), Gaps = 35/239 (14%)
Query: 13 NFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV-HSN 64
NF KIG+G+YG VY KL G+ A+K+++ +T+++ S E+ +L ++ H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKGLEY 123
+++L+ + L+LV+E+ L + ++ G PL + Q+ +GL +
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLL----QGLAF 117
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
H + +HRD+K N+L+++ K+ADFGL + + V T Y AP
Sbjct: 118 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYTHEVVTLWYRAP 171
Query: 184 EYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240
E + GC +T D+++ G + E++T R PG+++ +D + +F
Sbjct: 172 EILL-GCKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRIFR 217
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 118/239 (49%), Gaps = 35/239 (14%)
Query: 13 NFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV-HSN 64
NF KIG+G+YG VY KL G+ A+K+++ +T+++ S E+ +L ++ H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKGLEY 123
+++L+ + L+LV+E+ L + ++ G PL + Q+ +GL +
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLL----QGLAF 117
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
H + +HRD+K N+L+++ K+ADFGL + + V T Y AP
Sbjct: 118 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYTHEVVTLWYRAP 171
Query: 184 EYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240
E + GC +T D+++ G + E++T R PG+++ +D + +F
Sbjct: 172 EILL-GCKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRIFR 217
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQMKNTKSKEFSSELKILCKV-----HSNLIELIGYA 72
+G+G+YG V L ++ + A+K + ++ + +K + H N+++ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
G+ +L EY G L D + P + +P A Q+ G+ Y+H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLM----AGVVYLHGIG---I 126
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV-RDGCV 191
HRD+K N+LLD KI+DFGL + ++ +++ GT Y+APE + R
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYN-NRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 192 TTKSDVYAFGVVLMELITGQ 211
DV++ G+VL ++ G+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGE 205
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 110/247 (44%), Gaps = 21/247 (8%)
Query: 13 NFSTSLKIGQGSYGSVYLGK--LRGKNAAIKQM------KNTKSKEFSSELKILCKV-HS 63
+F +G+GS+ +V L + + AIK + K K + E ++ ++ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 64 NLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEY 123
++L + L+ YA+NG L ++ K TR A + LEY
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTA-EIVSALEY 147
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAA-ASRIVGTFGYLA 182
+H +HRD+K NILL+ + +I DFG K+L SPE A A+ VGT Y++
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL--SPESKQARANXFVGTAQYVS 202
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDT 242
PE + + SD++A G ++ +L+ G R N G + D+ F
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEGLIFAKIIKLEYDFPEKFFPKA 261
Query: 243 KDFMAKL 249
+D + KL
Sbjct: 262 RDLVEKL 268
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 94/204 (46%), Gaps = 25/204 (12%)
Query: 19 KIGQGSYGSVYL--GKLRGKNAAIKQMKNTKSKEFSSELKILCKV-------HSNLIELI 69
K+G G+YG V L KL G AIK +K + S+ +L +V H N+++L
Sbjct: 11 KLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 70
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTK 129
+ + +LV E + G L D + ++ + I G Y+H++
Sbjct: 71 EFFEDKRNYYLVMEVYRGGELFDEIIL-----RQKFSEVDAAVIMKQVLSGTTYLHKHN- 124
Query: 130 PYYVHRDVKTSNILLDSNFR---AKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV 186
VHRD+K N+LL+S R KI DFGL E+ +GT Y+APE +
Sbjct: 125 --IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF----EVGGKMKERLGTAYYIAPEVL 178
Query: 187 RDGCVTTKSDVYAFGVVLMELITG 210
R K DV++ GV+L L+ G
Sbjct: 179 RKK-YDEKCDVWSCGVILYILLCG 201
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQMKNTKSKEFSSELKILCKV-----HSNLIELIGYA 72
+G+G+YG V L ++ + A+K + ++ + +K + H N+++ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
G+ +L EY G L D + P + +P A Q+ G+ Y+H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLM----AGVVYLHGIG---I 126
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV-RDGCV 191
HRD+K N+LLD KI+DFGL + ++ +++ GT Y+APE + R
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYN-NRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 192 TTKSDVYAFGVVLMELITGQ 211
DV++ G+VL ++ G+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQMKNTKSKEFSSELKILCKV-----HSNLIELIGYA 72
+G+G+YG V L ++ + A+K + ++ + +K + H N+++ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
G+ +L EY G L D + P + +P A Q+ G+ Y+H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLM----AGVVYLHGIG---I 126
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV-RDGCV 191
HRD+K N+LLD KI+DFGL + ++ +++ GT Y+APE + R
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYN-NRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 192 TTKSDVYAFGVVLMELITGQ 211
DV++ G+VL ++ G+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGE 205
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 30/197 (15%)
Query: 102 KKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL 161
K+P+ + + A+G+E++ +HRD+ NILL N KI DFGL + +
Sbjct: 193 KEPITMEDLISYSFQVARGMEFLSSRK---CIHRDLAARNILLSENNVVKICDFGLARDI 249
Query: 162 EHSPE-IAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANP 220
+P+ + +R+ ++APE + D +TKSDV+++GV+L E+ + L P
Sbjct: 250 YKNPDYVRKGDTRL--PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS----LGGSPYP 303
Query: 221 GNNQYTEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENW 280
G +DF ++L E + Y + Q+ L DC +
Sbjct: 304 GVQM-----------------DEDFCSRLREGMRMRAPEYSTPEIYQIML---DCWHRDP 343
Query: 281 KRRPDMSNAAIRLSHIL 297
K RP + +L +L
Sbjct: 344 KERPRFAELVEKLGDLL 360
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQMKNTKSKEFSSELKILCKV-----HSNLIELIGYA 72
+G+G+YG V L ++ + A+K + ++ + +K + H N+++ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
G+ +L EY G L D + P + +P A Q+ G+ Y+H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLM----AGVVYLHGIG---I 126
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV-RDGCV 191
HRD+K N+LLD KI+DFGL + ++ +++ GT Y+APE + R
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYN-NRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 192 TTKSDVYAFGVVLMELITGQ 211
DV++ G+VL ++ G+
Sbjct: 186 AEPVDVWSCGIVLTAMLAGE 205
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 120/242 (49%), Gaps = 35/242 (14%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV- 61
+ NF KIG+G+YG VY KL G+ A+K+++ +T+++ S E+ +L ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 62 HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKG 120
H N+++L+ + L+LV+E+ L + ++ G PL + Q+ +G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLL----QG 115
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L + H + +HRD+K N+L+++ K+ADFGL + + +V T Y
Sbjct: 116 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWY 169
Query: 181 LAPEYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238
APE + GC +T D+++ G + E++T R PG+++ +D + +
Sbjct: 170 RAPEILL-GCKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRI 216
Query: 239 FN 240
F
Sbjct: 217 FR 218
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 118/239 (49%), Gaps = 35/239 (14%)
Query: 13 NFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV-HSN 64
NF KIG+G+YG VY KL G+ A+K+++ +T+++ S E+ +L ++ H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKGLEY 123
+++L+ + L+LV+E+ L + ++ G PL + Q+ +GL +
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLL----QGLAF 125
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
H + +HRD+K N+L+++ K+ADFGL + + V T Y AP
Sbjct: 126 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYTHEVVTLWYRAP 179
Query: 184 EYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240
E + GC +T D+++ G + E++T R PG+++ +D + +F
Sbjct: 180 EILL-GCKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRIFR 225
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 21/203 (10%)
Query: 19 KIGQGSYGSVYLGKLR--GKNAAIKQMKNTKSK----EFSSELKILCKV-HSNLIELIGY 71
K+G G++G V+L + R G IK + +S+ + +E+++L + H N+I++
Sbjct: 29 KLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEV 88
Query: 72 AAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPY 131
++++V E + G L + + +GK L+ ++ L Y H +
Sbjct: 89 FEDYHNMYIVMETCEGGELLERIVSAQARGKA-LSEGYVAELMKQMMNALAYFHSQ---H 144
Query: 132 YVHRDVKTSNILLD---SNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE-YVR 187
VH+D+K NIL + KI DFGL +L + AA GT Y+APE + R
Sbjct: 145 VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAA----GTALYMAPEVFKR 200
Query: 188 DGCVTTKSDVYAFGVVLMELITG 210
D VT K D+++ GVV+ L+TG
Sbjct: 201 D--VTFKCDIWSAGVVMYFLLTG 221
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 119/242 (49%), Gaps = 35/242 (14%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV- 61
+ NF KIG+G+YG VY KL G+ A+K+++ +T+++ S E+ +L ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 62 HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKG 120
H N+++L+ + L+LV+E+ L + ++ G PL + Q+ +G
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLL----QG 116
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L + H + +HRD+K N+L+++ K+ADFGL + + V T Y
Sbjct: 117 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYTHEVVTLWY 170
Query: 181 LAPEYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238
APE + GC +T D+++ G + E++T R PG+++ +D + +
Sbjct: 171 RAPEILL-GCKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRI 217
Query: 239 FN 240
F
Sbjct: 218 FR 219
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQMKNTKSKEFSSELKILCKV-----HSNLIELIGYA 72
+G+G+YG V L ++ + A+K + ++ + +K + H N+++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
G+ +L EY G L D + P + +P A Q+ G+ Y+H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLM----AGVVYLHGIG---I 125
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV-RDGCV 191
HRD+K N+LLD KI+DFGL + ++ +++ GT Y+APE + R
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYN-NRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 192 TTKSDVYAFGVVLMELITGQ 211
DV++ G+VL ++ G+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 110/247 (44%), Gaps = 21/247 (8%)
Query: 13 NFSTSLKIGQGSYGSVYLGK--LRGKNAAIKQM------KNTKSKEFSSELKILCKV-HS 63
+F +G+GS+ +V L + + AIK + K K + E ++ ++ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 64 NLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEY 123
++L + L+ YA+NG L ++ K TR A + LEY
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYTA-EIVSALEY 147
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAA-ASRIVGTFGYLA 182
+H +HRD+K NILL+ + +I DFG K+L SPE A A+ VGT Y++
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL--SPESKQARANXFVGTAQYVS 202
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDT 242
PE + + SD++A G ++ +L+ G R N G + D+ F
Sbjct: 203 PELLTEKSAXKSSDLWALGCIIYQLVAGLPPF-RAGNEGLIFAKIIKLEYDFPEKFFPKA 261
Query: 243 KDFMAKL 249
+D + KL
Sbjct: 262 RDLVEKL 268
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 119/239 (49%), Gaps = 35/239 (14%)
Query: 13 NFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV-HSN 64
NF KIG+G+YG VY KL G+ A+K+++ +T+++ S E+ +L ++ H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKGLEY 123
+++L+ + L+LV+E+ L + ++ G PL + Q+ +GL +
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLL----QGLAF 117
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
H + +HRD+K N+L+++ K+ADFGL + + +V T Y AP
Sbjct: 118 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWYRAP 171
Query: 184 EYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240
E + GC +T D+++ G + E++T R PG+++ +D + +F
Sbjct: 172 EILL-GCKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRIFR 217
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQMKNTKSKEFSSELKILCKV-----HSNLIELIGYA 72
+G+G+YG V L ++ + A+K + ++ + +K + H N+++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
G+ +L EY G L D + P + +P A Q+ G+ Y+H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLM----AGVVYLHGIG---I 125
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV-RDGCV 191
HRD+K N+LLD KI+DFGL + ++ +++ GT Y+APE + R
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYN-NRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 192 TTKSDVYAFGVVLMELITGQ 211
DV++ G+VL ++ G+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 118/239 (49%), Gaps = 35/239 (14%)
Query: 13 NFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV-HSN 64
NF KIG+G+YG VY KL G+ A+K+++ +T+++ S E+ +L ++ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKGLEY 123
+++L+ + L+LV+E+ L + ++ G PL + Q+ +GL +
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLL----QGLAF 118
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
H + +HRD+K N+L+++ K+ADFGL + + V T Y AP
Sbjct: 119 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYTHEVVTLWYRAP 172
Query: 184 EYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240
E + GC +T D+++ G + E++T R PG+++ +D + +F
Sbjct: 173 EILL-GCKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRIFR 218
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 120/242 (49%), Gaps = 35/242 (14%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV- 61
+ NF KIG+G+YG VY KL G+ A+K+++ +T+++ S E+ +L ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 62 HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKG 120
H N+++L+ + L+LV+E+ L + ++ G PL + Q+ +G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLL----QG 115
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L + H + +HRD+K N+L+++ K+ADFGL + + +V T Y
Sbjct: 116 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWY 169
Query: 181 LAPEYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238
APE + GC +T D+++ G + E++T R PG+++ +D + +
Sbjct: 170 RAPEILL-GCKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRI 216
Query: 239 FN 240
F
Sbjct: 217 FR 218
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 119/239 (49%), Gaps = 35/239 (14%)
Query: 13 NFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV-HSN 64
NF KIG+G+YG VY KL G+ A+K+++ +T+++ S E+ +L ++ H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKGLEY 123
+++L+ + L+LV+E+ L + ++ G PL + Q+ +GL +
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLL----QGLAF 117
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
H + +HRD+K N+L+++ K+ADFGL + + +V T Y AP
Sbjct: 118 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWYRAP 171
Query: 184 EYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240
E + GC +T D+++ G + E++T R PG+++ +D + +F
Sbjct: 172 EILL-GCKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRIFR 217
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 94/204 (46%), Gaps = 25/204 (12%)
Query: 19 KIGQGSYGSVYL--GKLRGKNAAIKQMKNTKSKEFSSELKILCKV-------HSNLIELI 69
K+G G+YG V L KL G AIK +K + S+ +L +V H N+++L
Sbjct: 28 KLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 87
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTK 129
+ + +LV E + G L D + ++ + I G Y+H++
Sbjct: 88 EFFEDKRNYYLVMEVYRGGELFDEIIL-----RQKFSEVDAAVIMKQVLSGTTYLHKHN- 141
Query: 130 PYYVHRDVKTSNILLDSNFR---AKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV 186
VHRD+K N+LL+S R KI DFGL E+ +GT Y+APE +
Sbjct: 142 --IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF----EVGGKMKERLGTAYYIAPEVL 195
Query: 187 RDGCVTTKSDVYAFGVVLMELITG 210
R K DV++ GV+L L+ G
Sbjct: 196 RKK-YDEKCDVWSCGVILYILLCG 218
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 120/242 (49%), Gaps = 35/242 (14%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV- 61
+ NF KIG+G+YG VY KL G+ A+K+++ +T+++ S E+ +L ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 62 HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKG 120
H N+++L+ + L+LV+E+ L + ++ G PL + Q+ +G
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLL----QG 116
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L + H + +HRD+K N+L+++ K+ADFGL + + +V T Y
Sbjct: 117 LAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWY 170
Query: 181 LAPEYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238
APE + GC +T D+++ G + E++T R PG+++ +D + +
Sbjct: 171 RAPEILL-GCKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRI 217
Query: 239 FN 240
F
Sbjct: 218 FR 219
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 120/242 (49%), Gaps = 35/242 (14%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV- 61
+ NF KIG+G+YG VY KL G+ A+K+++ +T+++ S E+ +L ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 62 HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKG 120
H N+++L+ + L+LV+E+ L + ++ G PL + Q+ +G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLL----QG 115
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L + H + +HRD+K N+L+++ K+ADFGL + + +V T Y
Sbjct: 116 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWY 169
Query: 181 LAPEYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238
APE + GC +T D+++ G + E++T R PG+++ +D + +
Sbjct: 170 RAPEILL-GCKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRI 216
Query: 239 FN 240
F
Sbjct: 217 FR 218
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 120/242 (49%), Gaps = 35/242 (14%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV- 61
+ NF KIG+G+YG VY KL G+ A+K+++ +T+++ S E+ +L ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 62 HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKG 120
H N+++L+ + L+LV+E+ L + ++ G PL + Q+ +G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLL----QG 115
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L + H + +HRD+K N+L+++ K+ADFGL + + +V T Y
Sbjct: 116 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWY 169
Query: 181 LAPEYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238
APE + GC +T D+++ G + E++T R PG+++ +D + +
Sbjct: 170 RAPEILL-GCKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRI 216
Query: 239 FN 240
F
Sbjct: 217 FR 218
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 118/239 (49%), Gaps = 35/239 (14%)
Query: 13 NFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV-HSN 64
NF KIG+G+YG VY KL G+ A+K+++ +T+++ S E+ +L ++ H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKGLEY 123
+++L+ + L+LV+E+ L + ++ G PL + Q+ +GL +
Sbjct: 63 IVKLLDVIHTENKLYLVFEHVHQD-LKTFMDASALTGIPLPLIKSYLFQLL----QGLAF 117
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
H + +HRD+K N+L+++ K+ADFGL + + V T Y AP
Sbjct: 118 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYTHEVVTLWYRAP 171
Query: 184 EYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240
E + GC +T D+++ G + E++T R PG+++ +D + +F
Sbjct: 172 EILL-GCKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRIFR 217
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 105/220 (47%), Gaps = 29/220 (13%)
Query: 7 VRDATSNFSTSLK----IGQGSYGSVYL--GKLRGKNAAIK-----QMKNTKSKE-FSSE 54
V+ +T+ FS K +G+GS+G V L K+ G+ A+K Q+K KE E
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 55 LKILCKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
+++L ++ H N+ +L + +LV E G L D + +K + +I
Sbjct: 77 VQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDE-----IISRKRFSEVDAARI 131
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFR---AKIADFGLVKLLEHSPEIAAA 170
G+ Y H K VHRD+K N+LL+S + +I DFGL E S +
Sbjct: 132 IRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK 188
Query: 171 ASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITG 210
+GT Y+APE V G K DV++ GV+L L++G
Sbjct: 189 ----IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 119/239 (49%), Gaps = 35/239 (14%)
Query: 13 NFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV-HSN 64
NF KIG+G+YG VY KL G+ A+K+++ +T+++ S E+ +L ++ H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKGLEY 123
+++L+ + L+LV+E+ L + ++ G PL + Q+ +GL +
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLL----QGLAF 119
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
H + +HRD+K N+L+++ K+ADFGL + + +V T Y AP
Sbjct: 120 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWYRAP 173
Query: 184 EYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240
E + GC +T D+++ G + E++T R PG+++ +D + +F
Sbjct: 174 EILL-GCKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRIFR 219
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 120/242 (49%), Gaps = 35/242 (14%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV- 61
+ NF KIG+G+YG VY KL G+ A+K+++ +T+++ S E+ +L ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 62 HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKG 120
H N+++L+ + L+LV+E+ L + ++ G PL + Q+ +G
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLL----QG 116
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L + H + +HRD+K N+L+++ K+ADFGL + + +V T Y
Sbjct: 117 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWY 170
Query: 181 LAPEYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238
APE + GC +T D+++ G + E++T R PG+++ +D + +
Sbjct: 171 RAPEILL-GCKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRI 217
Query: 239 FN 240
F
Sbjct: 218 FR 219
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 120/242 (49%), Gaps = 35/242 (14%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV- 61
+ NF KIG+G+YG VY KL G+ A+K+++ +T+++ S E+ +L ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 62 HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKG 120
H N+++L+ + L+LV+E+ L + ++ G PL + Q+ +G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLL----QG 118
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L + H + +HRD+K N+L+++ K+ADFGL + + +V T Y
Sbjct: 119 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWY 172
Query: 181 LAPEYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238
APE + GC +T D+++ G + E++T R PG+++ +D + +
Sbjct: 173 RAPEILL-GCKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRI 219
Query: 239 FN 240
F
Sbjct: 220 FR 221
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 120/242 (49%), Gaps = 35/242 (14%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV- 61
+ NF KIG+G+YG VY KL G+ A+K+++ +T+++ S E+ +L ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 62 HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKG 120
H N+++L+ + L+LV+E+ L + ++ G PL + Q+ +G
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLL----QG 117
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L + H + +HRD+K N+L+++ K+ADFGL + + +V T Y
Sbjct: 118 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWY 171
Query: 181 LAPEYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238
APE + GC +T D+++ G + E++T R PG+++ +D + +
Sbjct: 172 RAPEILL-GCKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRI 218
Query: 239 FN 240
F
Sbjct: 219 FR 220
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 120/242 (49%), Gaps = 35/242 (14%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV- 61
+ NF KIG+G+YG VY KL G+ A+K+++ +T+++ S E+ +L ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 62 HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKG 120
H N+++L+ + L+LV+E+ L + ++ G PL + Q+ +G
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLL----QG 117
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L + H + +HRD+K N+L+++ K+ADFGL + + +V T Y
Sbjct: 118 LAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWY 171
Query: 181 LAPEYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238
APE + GC +T D+++ G + E++T R PG+++ +D + +
Sbjct: 172 RAPEILL-GCKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRI 218
Query: 239 FN 240
F
Sbjct: 219 FR 220
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 120/242 (49%), Gaps = 35/242 (14%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV- 61
+ NF KIG+G+YG VY KL G+ A+K+++ +T+++ S E+ +L ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 62 HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKG 120
H N+++L+ + L+LV+E+ L + ++ G PL + Q+ +G
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLL----QG 117
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L + H + +HRD+K N+L+++ K+ADFGL + + +V T Y
Sbjct: 118 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWY 171
Query: 181 LAPEYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238
APE + GC +T D+++ G + E++T R PG+++ +D + +
Sbjct: 172 RAPEILL-GCKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRI 218
Query: 239 FN 240
F
Sbjct: 219 FR 220
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 120/242 (49%), Gaps = 35/242 (14%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV- 61
+ NF KIG+G+YG VY KL G+ A+K+++ +T+++ S E+ +L ++
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 62 HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKG 120
H N+++L+ + L+LV+E+ L + ++ G PL + Q+ +G
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLL----QG 119
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L + H + +HRD+K N+L+++ K+ADFGL + + +V T Y
Sbjct: 120 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWY 173
Query: 181 LAPEYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238
APE + GC +T D+++ G + E++T R PG+++ +D + +
Sbjct: 174 RAPEILL-GCKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRI 220
Query: 239 FN 240
F
Sbjct: 221 FR 222
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 120/242 (49%), Gaps = 35/242 (14%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV- 61
+ NF KIG+G+YG VY KL G+ A+K+++ +T+++ S E+ +L ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 62 HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKG 120
H N+++L+ + L+LV+E+ L + ++ G PL + Q+ +G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLL----QG 118
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L + H + +HRD+K N+L+++ K+ADFGL + + +V T Y
Sbjct: 119 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWY 172
Query: 181 LAPEYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238
APE + GC +T D+++ G + E++T R PG+++ +D + +
Sbjct: 173 RAPEILL-GCKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRI 219
Query: 239 FN 240
F
Sbjct: 220 FR 221
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 129/302 (42%), Gaps = 52/302 (17%)
Query: 19 KIGQGSYGSVYLGKLR--GKNAAIKQMKNTKSKEFSS----ELKILCKVHSN--LIELIG 70
++G G+ G V+ + R G A+KQM+ + +KE + +L ++ K H +++ G
Sbjct: 32 EMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFG 91
Query: 71 YAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+F+ E G ++ L ++G P ++ +A+ K L Y+ + K
Sbjct: 92 TFITNTDVFIAMELM--GTCAEKLK-KRMQGPIPERILGKMTVAI--VKALYYLKE--KH 144
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
+HRDVK SNILLD + K+ DFG+ L A R G Y+APE +
Sbjct: 145 GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD----KAKDRSAGCAAYMAPERIDPPD 200
Query: 191 VT-----TKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDF 245
T ++DV++ G+ L+EL TGQ P N T+ L +
Sbjct: 201 PTKPDYDIRADVWSLGISLVELATGQ-------FPYKNCKTDFEVLTKVLQE-------- 245
Query: 246 MAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSKEWEK 305
+P L H KDC+ ++ ++RP + L H I K +E
Sbjct: 246 --------EPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKL---LEHSFI--KRYET 292
Query: 306 ME 307
+E
Sbjct: 293 LE 294
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 120/242 (49%), Gaps = 35/242 (14%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV- 61
+ NF KIG+G+YG VY KL G+ A+K+++ +T+++ S E+ +L ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 62 HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKG 120
H N+++L+ + L+LV+E+ L + ++ G PL + Q+ +G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKTFMDASALTGIPLPLIKSYLFQLL----QG 118
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L + H + +HRD+K N+L+++ K+ADFGL + + +V T Y
Sbjct: 119 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWY 172
Query: 181 LAPEYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238
APE + GC +T D+++ G + E++T R PG+++ +D + +
Sbjct: 173 RAPEILL-GCKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRI 219
Query: 239 FN 240
F
Sbjct: 220 FR 221
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 20 IGQGSYGSVYL------GKLRGKNAAIKQMKNTKSKEFSS----ELKILCKV-HSNLIEL 68
+G+G +G V L G+ A+K +K + S E++IL + H ++++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 69 IGYA--AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ 126
G G S+ LV EY G+L D+L V + L + ++ +G+ Y+H
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQI------CEGMAYLH- 128
Query: 127 YTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV 186
+Y+HR + N+LLD++ KI DFGL K + E + APE +
Sbjct: 129 --AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 186
Query: 187 RDGCVTTKSDVYAFGVVLMELIT 209
++ SDV++FGV L EL+T
Sbjct: 187 KECKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 22/203 (10%)
Query: 20 IGQGSYGSVYL------GKLRGKNAAIKQMKNTKSKEFSS----ELKILCKV-HSNLIEL 68
+G+G +G V L G+ A+K +K + S E++IL + H ++++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 69 IGYA--AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ 126
G G S+ LV EY G+L D+L V + L + ++ +G+ Y+H
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQI------CEGMAYLH- 129
Query: 127 YTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV 186
+Y+HR + N+LLD++ KI DFGL K + E + APE +
Sbjct: 130 --AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 187
Query: 187 RDGCVTTKSDVYAFGVVLMELIT 209
++ SDV++FGV L EL+T
Sbjct: 188 KECKFYYASDVWSFGVTLYELLT 210
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 20 IGQGSYGSVYLG-----KLRGKNAAIKQMKNT----KSKEFSSELKILCKV-HSNLIELI 69
+G+G +G VY G K N A+K K ++F SE I+ + H ++++LI
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTK 129
G + +++ E G L +L + K L T V +L K + Y+
Sbjct: 76 GIIEE-EPTWIIMELYPYGELGHYLE----RNKNSLKVLTLVLYSLQICKAMAYLESIN- 129
Query: 130 PYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG 189
VHRD+ NIL+ S K+ DFGL + +E A+ +R+ +++PE +
Sbjct: 130 --CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINFR 185
Query: 190 CVTTKSDVYAFGVVLMELIT-GQQAL 214
TT SDV+ F V + E+++ G+Q
Sbjct: 186 RFTTASDVWMFAVCMWEILSFGKQPF 211
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 20 IGQGSYGSVYLG-----KLRGKNAAIKQMKNT----KSKEFSSELKILCKV-HSNLIELI 69
+G+G +G VY G K N A+K K ++F SE I+ + H ++++LI
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTK 129
G + +++ E G L +L + K L T V +L K + Y+
Sbjct: 92 GIIEE-EPTWIIMELYPYGELGHYLE----RNKNSLKVLTLVLYSLQICKAMAYLESIN- 145
Query: 130 PYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG 189
VHRD+ NIL+ S K+ DFGL + +E A+ +R+ +++PE +
Sbjct: 146 --CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINFR 201
Query: 190 CVTTKSDVYAFGVVLMELIT-GQQAL 214
TT SDV+ F V + E+++ G+Q
Sbjct: 202 RFTTASDVWMFAVCMWEILSFGKQPF 227
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 113/277 (40%), Gaps = 35/277 (12%)
Query: 13 NFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQM------KNTKSKEFSSELKILCKV-HS 63
+F +G+G +G+VYL + + A+K + K + E++I + H
Sbjct: 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 64 NLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEY 123
N++ + Y ++L+ E+A G L L G+ + A L Y
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKEL---QKHGR--FDEQRSATFMEELADALHY 129
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
H+ +HRD+K N+L+ KIADFG H+P + + GT YL P
Sbjct: 130 CHERK---VIHRDIKPENLLMGYKGELKIADFGWSV---HAPSLRRRX--MCGTLDYLPP 181
Query: 184 EYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTK 243
E + K D++ GV+ E + G +P + + HR +V+ L
Sbjct: 182 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD---SPSHTE--THRRIVNVDLKF----P 232
Query: 244 DFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENW 280
F++ ++ L L RYH L + K ++ W
Sbjct: 233 PFLSDGSKDLISKLLRYHPPQRLPL----KGVMEHPW 265
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 109/234 (46%), Gaps = 41/234 (17%)
Query: 20 IGQGSYGSVYLGKLRGKN-------AAIKQMK----NTKSKEFSSELKILCKV--HSNLI 66
+G G++G V G + A+K +K +++ + SELK++ ++ H N++
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIV 112
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKP------------------LAWT 108
L+G ++L++EY G L ++L K + L +
Sbjct: 113 NLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFE 172
Query: 109 TRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVK-LLEHSPEI 167
+ A AKG+E++ + VHRD+ N+L+ KI DFGL + ++ S +
Sbjct: 173 DLLCFAYQVAKGMEFLEFKSC---VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV 229
Query: 168 AAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPG 221
+R+ ++APE + +G T KSDV+++G++L E+ + L + PG
Sbjct: 230 VRGNARL--PVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS----LGVNPYPG 277
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 115/280 (41%), Gaps = 32/280 (11%)
Query: 13 NFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQM------KNTKSKEFSSELKILCKV-HS 63
+F +G+G +G+VYL + + A+K + K + E++I + H
Sbjct: 16 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 75
Query: 64 NLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEY 123
N++ + Y ++L+ E+A G L L G+ + A L Y
Sbjct: 76 NILRMYNYFHDRKRIYLMLEFAPRGELYKEL---QKHGR--FDEQRSATFMEELADALHY 130
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
H+ +HRD+K N+L+ KIADFG H+P + + GT YL P
Sbjct: 131 CHERK---VIHRDIKPENLLMGYKGELKIADFGWSV---HAPSLRRRX--MCGTLDYLPP 182
Query: 184 EYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTK 243
E + K D++ GV+ E + G +P + + HR +V+ L
Sbjct: 183 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD---SPSHTE--THRRIVNVDLKF----P 233
Query: 244 DFMAKLTECLDPNLTRYHKDSMLQM-ALLSKDCVDENWKR 282
F++ ++ L L RYH L + ++ V N +R
Sbjct: 234 PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSRR 273
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 120/242 (49%), Gaps = 35/242 (14%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV- 61
+ NF KIG+G+YG VY KL G+ A+K+++ +T+++ S E+ +L ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 62 HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKG 120
H N+++L+ + L+LV+E+ L + ++ G PL + Q+ +G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQD-LKKFMDASALTGIPLPLIKSYLFQLL----QG 118
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L + H + +HRD+K N+L+++ K+ADFGL + + +V T Y
Sbjct: 119 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWY 172
Query: 181 LAPEYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238
APE + GC +T D+++ G + E++T R PG+++ +D + +
Sbjct: 173 RAPEILL-GCKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRI 219
Query: 239 FN 240
F
Sbjct: 220 FR 221
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 39/228 (17%)
Query: 12 SNFSTSLKIGQGSYGSVYLGK--LRGKNAAIKQMKNTKSK--EFSSELKILCKVH----- 62
S+F +GQG++G V + L + AIK++++T+ K SE+ +L ++
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVV 65
Query: 63 ---------SNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
N ++ +LF+ EY +N L D +H ++ ++ W QI
Sbjct: 66 RYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQI 125
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
+ L YIH +HR++K NI +D + KI DFGL K + S +I S+
Sbjct: 126 L----EALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 174 -----------IVGTFGYLAPEYVRDGC--VTTKSDVYAFGVVLMELI 208
+GT Y+A E V DG K D Y+ G++ E I
Sbjct: 179 NLPGSSDNLTSAIGTAXYVATE-VLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 21/206 (10%)
Query: 20 IGQGSYGSVYLG-----KLRGKNAAIKQMKNT----KSKEFSSELKILCKV-HSNLIELI 69
+G+G +G VY G K N A+K K ++F SE I+ + H ++++LI
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTK 129
G + +++ E G L +L + K L T V +L K + Y+
Sbjct: 80 GIIEE-EPTWIIMELYPYGELGHYLE----RNKNSLKVLTLVLYSLQICKAMAYLESIN- 133
Query: 130 PYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG 189
VHRD+ NIL+ S K+ DFGL + +E A+ +R+ +++PE +
Sbjct: 134 --CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINFR 189
Query: 190 CVTTKSDVYAFGVVLMELIT-GQQAL 214
TT SDV+ F V + E+++ G+Q
Sbjct: 190 RFTTASDVWMFAVCMWEILSFGKQPF 215
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 35/218 (16%)
Query: 19 KIGQGSYGSVYLGKLRG-------KNAAIKQMKNTKS----KEFSSELKILCKV-HSNLI 66
++G+ +G VY G L G + AIK +K+ +EF E + ++ H N++
Sbjct: 33 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 92
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-----------KKPLAWTTRVQIAL 115
L+G L +++ Y +G L + L S K L V +
Sbjct: 93 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 152
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
A G+EY+ + + VH+D+ T N+L+ KI+D GL + + AA +++
Sbjct: 153 QIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREV-----YAADYYKLL 204
Query: 176 GT----FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
G ++APE + G + SD++++GVVL E+ +
Sbjct: 205 GNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 105/213 (49%), Gaps = 19/213 (8%)
Query: 20 IGQGSYGSVYLGKL--RGKN---AAIKQM-KNTKSKEFSSELK--ILCKV--HSNLIELI 69
IG+G +G VY G+ + +N AIK + + T+ ++ + L+ +L + H N++ LI
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 70 GYAAGGDSL-FLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT 128
G + L ++ Y +G L + P + P + L A+G+EY+ +
Sbjct: 89 GIMLPPEGLPHVLLPYMCHGDLLQFIRSPQ---RNPTV-KDLISFGLQVARGMEYLAEQK 144
Query: 129 KPYYVHRDVKTSNILLDSNFRAKIADFGLVK-LLEHSPEIAAAASRIVGTFGYLAPEYVR 187
+VHRD+ N +LD +F K+ADFGL + +L+ + A E ++
Sbjct: 145 ---FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQ 201
Query: 188 DGCVTTKSDVYAFGVVLMELITGQQALSRDANP 220
TTKSDV++FGV+L EL+T R +P
Sbjct: 202 TYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP 234
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 24/212 (11%)
Query: 20 IGQGSYGSVYLGKLRGKN--------AAIKQMKNTKSKEFSSELKILCKVHSNLIELIGY 71
IG+G++G V L + + + + +K + S F E I+ +S + +
Sbjct: 83 IGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFC 142
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
A D L++V EY G L + + V K +T V +ALDA IH
Sbjct: 143 AFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDA------IHSMG-- 194
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVR--- 187
+HRDVK N+LLD + K+ADFG ++ + + + VGT Y++PE ++
Sbjct: 195 -LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTA--VGTPDYISPEVLKSQG 251
Query: 188 -DGCVTTKSDVYAFGVVLMELITGQQALSRDA 218
DG + D ++ GV L E++ G D+
Sbjct: 252 GDGYYGRECDWWSVGVFLFEMLVGDTPFYADS 283
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 107/239 (44%), Gaps = 28/239 (11%)
Query: 10 ATSNFSTSLKIGQGSYGSVYL-----GKLRGKNAAIKQMKNT------KSKEFS-SELKI 57
NF +G G+YG V+L G GK A+K +K K+ E + +E ++
Sbjct: 52 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQV 111
Query: 58 LCKV-HSNLIELIGYAAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIAL 115
L + S + + YA ++ L L+ +Y G L HL ++ VQI +
Sbjct: 112 LEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL------SQRERFTEHEVQIYV 165
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+ LE++H+ ++RD+K NILLDSN + DFGL K E + A
Sbjct: 166 GEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSK--EFVADETERAYDF 220
Query: 175 VGTFGYLAPEYVR--DGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSL 231
GT Y+AP+ VR D D ++ GV++ EL+TG + D + R L
Sbjct: 221 CGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL 279
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 113/277 (40%), Gaps = 35/277 (12%)
Query: 13 NFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQM------KNTKSKEFSSELKILCKV-HS 63
+F +G+G +G+VYL + + A+K + K + E++I + H
Sbjct: 15 DFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 64 NLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEY 123
N++ + Y ++L+ E+A G L L G+ + A L Y
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKEL---QKHGR--FDEQRSATFMEELADALHY 129
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
H+ +HRD+K N+L+ KIADFG H+P + + GT YL P
Sbjct: 130 CHERK---VIHRDIKPENLLMGYKGELKIADFGWSV---HAPSLRRRX--MCGTLDYLPP 181
Query: 184 EYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTK 243
E + K D++ GV+ E + G +P + + HR +V+ L
Sbjct: 182 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD---SPSHTE--THRRIVNVDLKF----P 232
Query: 244 DFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENW 280
F++ ++ L L RYH L + K ++ W
Sbjct: 233 PFLSDGSKDLISKLLRYHPPQRLPL----KGVMEHPW 265
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 120/242 (49%), Gaps = 35/242 (14%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV- 61
+ NF KIG+G+YG VY KL G+ A+K+++ +T+++ S E+ +L ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 62 HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKG 120
H N+++L+ + L+LV+E+ L + ++ G PL + Q+ +G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMD-LKKFMDASALTGIPLPLIKSYLFQLL----QG 118
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L + H + +HRD+K N+L+++ K+ADFGL + + +V T Y
Sbjct: 119 LAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWY 172
Query: 181 LAPEYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238
APE + GC +T D+++ G + E++T R PG+++ +D + +
Sbjct: 173 RAPEILL-GCKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRI 219
Query: 239 FN 240
F
Sbjct: 220 FR 221
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 120/242 (49%), Gaps = 35/242 (14%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV- 61
+ NF KIG+G+YG VY KL G+ A+K+++ +T+++ S E+ +L ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 62 HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKG 120
H N+++L+ + L+LV+E+ L + ++ G PL + Q+ +G
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSMD-LKKFMDASALTGIPLPLIKSYLFQLL----QG 116
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L + H + +HRD+K N+L+++ K+ADFGL + + +V T Y
Sbjct: 117 LAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV-TLWY 170
Query: 181 LAPEYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238
APE + GC +T D+++ G + E++T R PG+++ +D + +
Sbjct: 171 RAPEILL-GCKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRI 217
Query: 239 FN 240
F
Sbjct: 218 FR 219
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 100/218 (45%), Gaps = 35/218 (16%)
Query: 19 KIGQGSYGSVYLGKLRG-------KNAAIKQMKNTKS----KEFSSELKILCKV-HSNLI 66
++G+ +G VY G L G + AIK +K+ +EF E + ++ H N++
Sbjct: 16 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 75
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-----------KKPLAWTTRVQIAL 115
L+G L +++ Y +G L + L S K L V +
Sbjct: 76 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 135
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
A G+EY+ + + VH+D+ T N+L+ KI+D GL + + AA +++
Sbjct: 136 QIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREV-----YAADYYKLL 187
Query: 176 GT----FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
G ++APE + G + SD++++GVVL E+ +
Sbjct: 188 GNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQMKNTKSKEFSSELKILCKV-------HSNLIELIG 70
+G G++G V +G +L G A+K + K + KI ++ H ++I+L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 71 YAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ F+V EY G L D++ G+ R+ + +A ++Y H++
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYI---CKHGRVEEMEARRLFQQILSA--VDYCHRHM-- 131
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
VHRD+K N+LLD++ AKIADFGL ++ + + G+ Y APE +
Sbjct: 132 -VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC----GSPNYAAPEVISGRL 186
Query: 191 -VTTKSDVYAFGVVLMELITGQQALSRDANP 220
+ D+++ GV+L L+ G + P
Sbjct: 187 YAGPEVDIWSCGVILYALLCGTLPFDDEHVP 217
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 25/212 (11%)
Query: 19 KIGQGSYGSVYLGKLRGKNA----AIKQMKNTK-SKEFSSELKILCKV-HSNLIEL--IG 70
K+G+G+YG VY K + A+KQ++ T S E+ +L ++ H N+I L +
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVF 87
Query: 71 YAAGGDSLFLVYEYAQNGALSD-HLHWPSVKGKKPLAWTTRVQIALDAAKGLEY-----I 124
+ ++L+++YA++ H S KKP VQ+ K L Y I
Sbjct: 88 LSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKP------VQLPRGMVKSLLYQILDGI 141
Query: 125 HQYTKPYYVHRDVKTSNILL----DSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
H + +HRD+K +NIL+ R KIAD G +L + A +V TF Y
Sbjct: 142 HYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWY 201
Query: 181 LAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
APE + TK+ D++A G + EL+T +
Sbjct: 202 RAPELLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 35/239 (14%)
Query: 13 NFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV-HSN 64
NF KIG+G+YG VY KL G+ A+ +++ +T+++ S E+ +L ++ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKGLEY 123
+++L+ + L+LV+E+ L + ++ G PL + Q+ +GL +
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLL----QGLAF 118
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
H + +HRD+K N+L+++ K+ADFGL + + V T Y AP
Sbjct: 119 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYTHEVVTLWYRAP 172
Query: 184 EYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240
E + GC +T D+++ G + E++T R PG+++ +D + +F
Sbjct: 173 EILL-GCKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRIFR 218
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 35/239 (14%)
Query: 13 NFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV-HSN 64
NF KIG+G+YG VY KL G+ A+ +++ +T+++ S E+ +L ++ H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKGLEY 123
+++L+ + L+LV+E+ L + ++ G PL + Q+ +GL +
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLL----QGLAF 117
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
H + +HRD+K N+L+++ K+ADFGL + + V T Y AP
Sbjct: 118 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYTHEVVTLWYRAP 171
Query: 184 EYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240
E + GC +T D+++ G + E++T R PG+++ +D + +F
Sbjct: 172 EILL-GCKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRIFR 217
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 21/221 (9%)
Query: 5 NEVRDATSNFSTSLKIGQGSYGSVYLGKLRG----------KNAAIKQMKNTKSKEFSSE 54
N R ++F+ + +G+GS+G V L + +G K + Q + +
Sbjct: 13 NRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKR 72
Query: 55 LKILCKVHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIA 114
+ L L +L D L+ V EY G L H+ + K+P A +IA
Sbjct: 73 VLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIA 131
Query: 115 LDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+ GL ++ ++RD+K N++LDS KIADFG+ K +
Sbjct: 132 I----GLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXF 181
Query: 175 VGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALS 215
GT Y+APE + D +AFGV+L E++ GQ
Sbjct: 182 CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 104/228 (45%), Gaps = 22/228 (9%)
Query: 3 SYNEVRDATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMKNTKSKEFSSELKILCK 60
S ++ R ++ +G G++G V +G +L G A+K + K + KI +
Sbjct: 2 SKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKRE 61
Query: 61 V-------HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
+ H ++I+L + F+V EY G L D++ G+ R+
Sbjct: 62 IQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI---CKHGRVEEMEARRLFQ 118
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
+ +A ++Y H++ VHRD+K N+LLD++ AKIADFGL ++ + +
Sbjct: 119 QILSA--VDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC-- 171
Query: 174 IVGTFGYLAPEYVRDGCVT-TKSDVYAFGVVLMELITGQQALSRDANP 220
G+ Y APE + + D+++ GV+L L+ G + P
Sbjct: 172 --GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP 217
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 21/220 (9%)
Query: 5 NEVRDATSNFSTSLKIGQGSYGSVYLGKLRG----------KNAAIKQMKNTKSKEFSSE 54
N R ++F+ + +G+GS+G V L + +G K + Q + +
Sbjct: 334 NRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKR 393
Query: 55 LKILCKVHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIA 114
+ L L +L D L+ V EY G L H+ + K+P A +IA
Sbjct: 394 VLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIA 452
Query: 115 LDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+ GL ++ ++RD+K N++LDS KIADFG+ K +
Sbjct: 453 I----GLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXF 502
Query: 175 VGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQAL 214
GT Y+APE + D +AFGV+L E++ GQ
Sbjct: 503 CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 542
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 26/204 (12%)
Query: 19 KIGQGSYGSVYL--GKLRGKNAAIKQMKNTKSKEFSSELKILCKV-------HSNLIELI 69
K+G G+YG V L K+ AIK ++ T S SS K+L +V H N+++L
Sbjct: 44 KLGSGAYGEVLLCRDKVTHVERAIKIIRKT-SVSTSSNSKLLEEVAVLKLLDHPNIMKLY 102
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTK 129
+ + +LV E + G L D + + I G+ Y+H++
Sbjct: 103 DFFEDKRNYYLVMECYKGGELFDE-----IIHRMKFNEVDAAVIIKQVLSGVTYLHKHN- 156
Query: 130 PYYVHRDVKTSNILLDSNFR---AKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV 186
VHRD+K N+LL+S + KI DFGL + E+ ++ +GT Y+APE +
Sbjct: 157 --IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKER----LGTAYYIAPEVL 210
Query: 187 RDGCVTTKSDVYAFGVVLMELITG 210
R K DV++ GV+L L+ G
Sbjct: 211 RKK-YDEKCDVWSIGVILFILLAG 233
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQMKNTKSKEFSSELKILCKV-----HSNLIELIGYA 72
+G+G+ G V L ++ + A+K + ++ + +K + H N+++ G+
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
G+ +L EY G L D + P + +P A Q+ G+ Y+H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLM----AGVVYLHGIG---I 125
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV-RDGCV 191
HRD+K N+LLD KI+DFGL + ++ +++ GT Y+APE + R
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYN-NRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 192 TTKSDVYAFGVVLMELITGQ 211
DV++ G+VL ++ G+
Sbjct: 185 AEPVDVWSCGIVLTAMLAGE 204
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 114/239 (47%), Gaps = 22/239 (9%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSVYL------GKLRGKNAAIKQMKNTKSKEFSSELKILC 59
E++D +F ++G G+ G V+ G + + ++K + EL++L
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 60 KVHSN-LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAA 118
+ +S ++ G + + E+ G+L L G+ P +V IA+
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK---AGRIPEQILGKVSIAV--I 114
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTF 178
KGL Y+ + K +HRDVK SNIL++S K+ DFG+ L I + A+ VGT
Sbjct: 115 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL-----IDSMANSFVGTR 167
Query: 179 GYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQAL-SRDANPGNNQYTEHRSLVDYML 236
Y++PE ++ + +SD+++ G+ L+E+ G+ + DA + L+DY++
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIV 226
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 26/204 (12%)
Query: 20 IGQGSYGSVYLGKLRGKN------AAIKQMKNTKSK----EFSSELKILCKV-HSNLIEL 68
+G G++G+VY G + AIK + T EF E I+ + H +L+ L
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 69 IGYAAGGDSLFLVYEYAQNGALSD--HLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ 126
+G ++ LV + +G L + H H ++ + L W ++ AKG+ Y+ +
Sbjct: 83 LGVCLS-PTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYLEE 135
Query: 127 YTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLE-HSPEIAAAASRIVGTFGYLAPEY 185
VHRD+ N+L+ S KI DFGL +LLE E A ++ ++A E
Sbjct: 136 RR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKM--PIKWMALEC 190
Query: 186 VRDGCVTTKSDVYAFGVVLMELIT 209
+ T +SDV+++GV + EL+T
Sbjct: 191 IHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 19 KIGQGSYGSVYLGKL---RGK--NAAIKQMKN------TKSKEFSSELKILCKV-HSNLI 66
K+G GS+G V G+ GK + A+K +K +F E+ + + H NLI
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ 126
L G + +V E A G+L D L K + T + A+ A+G+ Y+
Sbjct: 75 RLYGVVLT-PPMKMVTELAPLGSLLDRLR----KHQGHFLLGTLSRYAVQVAEGMGYLES 129
Query: 127 YTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV 186
++HRD+ N+LL + KI DFGL++ L + + F + APE +
Sbjct: 130 KR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL 186
Query: 187 RDGCVTTKSDVYAFGVVLMELIT-GQQA 213
+ + SD + FGV L E+ T GQ+
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 86/164 (52%), Gaps = 18/164 (10%)
Query: 54 ELKILCKV-HSNLIELIGYA--AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTR 110
E+ IL K+ H N+++L+ D L++V+E G + + P++K PL+
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV---MEVPTLK---PLSEDQA 139
Query: 111 VQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAA 170
D KG+EY+H Y K +HRD+K SN+L+ + KIADFG+ + S A
Sbjct: 140 RFYFQDLIKGIEYLH-YQK--IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGS---DAL 193
Query: 171 ASRIVGTFGYLAPEYVRDG--CVTTKS-DVYAFGVVLMELITGQ 211
S VGT ++APE + + + K+ DV+A GV L + GQ
Sbjct: 194 LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 100/220 (45%), Gaps = 26/220 (11%)
Query: 20 IGQGSYGSVYLGKL-RGKNAAIKQMKNTKSKEFSS-ELKILCKV-HSNLIELIGYA-AGG 75
IG GS+G V+ KL AIK++ + K F + EL+I+ V H N+++L + + G
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKV--LQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNG 105
Query: 76 DS-----LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
D L LV EY H+ +K P+ L + L YIH
Sbjct: 106 DKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQL--LRSLAYIHSIG-- 161
Query: 131 YYVHRDVKTSNILLDSNFRA-KIADFGLVK-LLEHSPEIAAAASRIVGTFGYLAPEYVRD 188
HRD+K N+LLD K+ DFG K L+ P ++ SR Y APE +
Sbjct: 162 -ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY-----YRAPELIFG 215
Query: 189 GC-VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTE 227
TT D+++ G V+ EL+ GQ ++ G +Q E
Sbjct: 216 ATNYTTNIDIWSTGCVMAELMQGQPLFPGES--GIDQLVE 253
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 116/238 (48%), Gaps = 33/238 (13%)
Query: 13 NFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV-HSN 64
NF KIG+G+YG VY KL G+ A+K+++ +T+++ S E+ +L ++ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKGLEY 123
+++L+ + L+LV+E+ L + ++ G PL + Q+ +GL +
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLL----QGLAF 118
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
H + +HRD+K N+L+++ K+ADFGL + + V T Y AP
Sbjct: 119 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYTHEVVTLWYRAP 172
Query: 184 EYVRDG-CVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240
E + +T D+++ G + E++T R PG+++ +D + +F
Sbjct: 173 EILLGXKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRIFR 218
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 116/238 (48%), Gaps = 33/238 (13%)
Query: 13 NFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMK-NTKSKEFSS----ELKILCKV-HSN 64
NF KIG+G+YG VY KL G+ A+K+++ +T+++ S E+ +L ++ H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG-KKPLAWTTRVQIALDAAKGLEY 123
+++L+ + L+LV+E+ L + ++ G PL + Q+ +GL +
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLL----QGLAF 125
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
H + +HRD+K N+L+++ K+ADFGL + + V T Y AP
Sbjct: 126 CHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP---VRTYTHEVVTLWYRAP 179
Query: 184 EYVRDG-CVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240
E + +T D+++ G + E++T R PG+++ +D + +F
Sbjct: 180 EILLGXKYYSTAVDIWSLGCIFAEMVT-----RRALFPGDSE-------IDQLFRIFR 225
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 19 KIGQGSYGSVYLGKL---RGK--NAAIKQMKN------TKSKEFSSELKILCKV-HSNLI 66
K+G GS+G V G+ GK + A+K +K +F E+ + + H NLI
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ 126
L G + +V E A G+L D L K + T + A+ A+G+ Y+
Sbjct: 85 RLYGVVLT-PPMKMVTELAPLGSLLDRLR----KHQGHFLLGTLSRYAVQVAEGMGYLES 139
Query: 127 YTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV 186
++HRD+ N+LL + KI DFGL++ L + + F + APE +
Sbjct: 140 KR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL 196
Query: 187 RDGCVTTKSDVYAFGVVLMELIT-GQQA 213
+ + SD + FGV L E+ T GQ+
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 14 FSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTK-SKEFSSELKILCKVHSNLIELIGYA 72
F+ +I V+ GK+ K+ +K + K S E S + H +++ G+
Sbjct: 52 FAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL---AHQHVVGFHGFF 108
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
D +F+V E + +L + LH +P A QI L G +Y+H+
Sbjct: 109 EDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVL----GCQYLHRNR---V 160
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVT 192
+HRD+K N+ L+ + KI DFGL +E+ E + GT Y+APE + +
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSKKGHS 217
Query: 193 TKSDVYAFGVVLMELITGQQAL 214
+ DV++ G ++ L+ G+
Sbjct: 218 FEVDVWSIGCIMYTLLVGKPPF 239
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 14 FSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTK-SKEFSSELKILCKVHSNLIELIGYA 72
F+ +I V+ GK+ K+ +K + K S E S + H +++ G+
Sbjct: 30 FAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL---AHQHVVGFHGFF 86
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
D +F+V E + +L + LH +P A QI L G +Y+H+
Sbjct: 87 EDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVL----GCQYLHRNR---V 138
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVT 192
+HRD+K N+ L+ + KI DFGL +E+ E + GT Y+APE + +
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---RKKTLCGTPNYIAPEVLSKKGHS 195
Query: 193 TKSDVYAFGVVLMELITGQQAL 214
+ DV++ G ++ L+ G+
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPF 217
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 14 FSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTK-SKEFSSELKILCKVHSNLIELIGYA 72
F+ +I V+ GK+ K+ +K + K S E S + H +++ G+
Sbjct: 30 FAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL---AHQHVVGFHGFF 86
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
D +F+V E + +L + LH +P A QI L G +Y+H+
Sbjct: 87 EDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVL----GCQYLHRNR---V 138
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVT 192
+HRD+K N+ L+ + KI DFGL +E+ E + GT Y+APE + +
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---RKKTLCGTPNYIAPEVLSKKGHS 195
Query: 193 TKSDVYAFGVVLMELITGQQAL 214
+ DV++ G ++ L+ G+
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPF 217
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 27/209 (12%)
Query: 19 KIGQGSYGSV--YLGKLRGKNAAIKQMK---NTKSKE-FSSELKILCKV-HSNLI----- 66
++G G +G V ++ + G+ AIKQ + + K++E + E++I+ K+ H N++
Sbjct: 22 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 81
Query: 67 -ELIGYAAGGDSLFLVYEYAQNGALSDHL-HWPSVKGKKPLAWTTRVQIALDAAKGLEYI 124
+ + A D L EY + G L +L + + G K T + D + L Y+
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT---LLSDISSALRYL 138
Query: 125 HQYTKPYYVHRDVKTSNILLDSNFRA---KIADFGLVKLLEHSPEIAAAASRIVGTFGYL 181
H+ +HRD+K NI+L + KI D G K L+ + VGT YL
Sbjct: 139 HENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ----GELCTEFVGTLQYL 191
Query: 182 APEYVRDGCVTTKSDVYAFGVVLMELITG 210
APE + T D ++FG + E ITG
Sbjct: 192 APELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 14 FSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTK-SKEFSSELKILCKVHSNLIELIGYA 72
F+ +I V+ GK+ K+ +K + K S E S + H +++ G+
Sbjct: 34 FAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL---AHQHVVGFHGFF 90
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
D +F+V E + +L + LH +P A QI L G +Y+H+
Sbjct: 91 EDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVL----GCQYLHRNR---V 142
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVT 192
+HRD+K N+ L+ + KI DFGL +E+ E + GT Y+APE + +
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---RKKTLCGTPNYIAPEVLSKKGHS 199
Query: 193 TKSDVYAFGVVLMELITGQQAL 214
+ DV++ G ++ L+ G+
Sbjct: 200 FEVDVWSIGCIMYTLLVGKPPF 221
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 27/209 (12%)
Query: 19 KIGQGSYGSV--YLGKLRGKNAAIKQMK---NTKSKE-FSSELKILCKV-HSNLI----- 66
++G G +G V ++ + G+ AIKQ + + K++E + E++I+ K+ H N++
Sbjct: 21 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 80
Query: 67 -ELIGYAAGGDSLFLVYEYAQNGALSDHL-HWPSVKGKKPLAWTTRVQIALDAAKGLEYI 124
+ + A D L EY + G L +L + + G K T + D + L Y+
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT---LLSDISSALRYL 137
Query: 125 HQYTKPYYVHRDVKTSNILLDSNFRA---KIADFGLVKLLEHSPEIAAAASRIVGTFGYL 181
H+ +HRD+K NI+L + KI D G K L+ + VGT YL
Sbjct: 138 HENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ----GELCTEFVGTLQYL 190
Query: 182 APEYVRDGCVTTKSDVYAFGVVLMELITG 210
APE + T D ++FG + E ITG
Sbjct: 191 APELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 32/215 (14%)
Query: 12 SNFSTSLKIGQGSYGSVYL---------GKLRG----KNAAIKQMKNTKSKEFSSELKIL 58
S+F +GQGS+G V+L G L K A +K ++K E IL
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTK---MERDIL 84
Query: 59 CKVHSNLIELIGYAAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIAL-D 116
V+ + + YA + L+L+ ++ + G L L K+ + V+ L +
Sbjct: 85 ADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL------SKEVMFTEEDVKFYLAE 138
Query: 117 AAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVK-LLEHSPEIAAAASRIV 175
A GL+++H ++RD+K NILLD K+ DFGL K ++H + A
Sbjct: 139 LALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKK----AYSFC 191
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITG 210
GT Y+APE V + +D +++GV++ E++TG
Sbjct: 192 GTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 26/204 (12%)
Query: 20 IGQGSYGSVYLGKLRGKN------AAIKQMKNTKSK----EFSSELKILCKV-HSNLIEL 68
+G G++G+VY G + AIK + T EF E I+ + H +L+ L
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 69 IGYAAGGDSLFLVYEYAQNGALSD--HLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ 126
+G ++ LV + +G L + H H ++ + L W ++ AKG+ Y+ +
Sbjct: 106 LGVCLS-PTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYLEE 158
Query: 127 YTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLE-HSPEIAAAASRIVGTFGYLAPEY 185
VHRD+ N+L+ S KI DFGL +LLE E A ++ ++A E
Sbjct: 159 RR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKM--PIKWMALEC 213
Query: 186 VRDGCVTTKSDVYAFGVVLMELIT 209
+ T +SDV+++GV + EL+T
Sbjct: 214 IHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 19 KIGQGSYGSVYLGKL---RGK--NAAIKQMKN------TKSKEFSSELKILCKV-HSNLI 66
K+G GS+G V G+ GK + A+K +K +F E+ + + H NLI
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ 126
L G + +V E A G+L D L K + T + A+ A+G+ Y+
Sbjct: 75 RLYGVVLT-PPMKMVTELAPLGSLLDRLR----KHQGHFLLGTLSRYAVQVAEGMGYLES 129
Query: 127 YTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV 186
++HRD+ N+LL + KI DFGL++ L + + F + APE +
Sbjct: 130 KR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 187 RDGCVTTKSDVYAFGVVLMELIT-GQQA 213
+ + SD + FGV L E+ T GQ+
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 19 KIGQGSYGSVYLGKL---RGK--NAAIKQMKN------TKSKEFSSELKILCKV-HSNLI 66
K+G GS+G V G+ GK + A+K +K +F E+ + + H NLI
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ 126
L G + +V E A G+L D L K + T + A+ A+G+ Y+
Sbjct: 75 RLYGVVLT-PPMKMVTELAPLGSLLDRLR----KHQGHFLLGTLSRYAVQVAEGMGYLES 129
Query: 127 YTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV 186
++HRD+ N+LL + KI DFGL++ L + + F + APE +
Sbjct: 130 KR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 187 RDGCVTTKSDVYAFGVVLMELIT-GQQA 213
+ + SD + FGV L E+ T GQ+
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 19 KIGQGSYGSVYLGKL---RGK--NAAIKQMKN------TKSKEFSSELKILCKV-HSNLI 66
K+G GS+G V G+ GK + A+K +K +F E+ + + H NLI
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ 126
L G + +V E A G+L D L K + T + A+ A+G+ Y+
Sbjct: 79 RLYGVVLT-PPMKMVTELAPLGSLLDRLR----KHQGHFLLGTLSRYAVQVAEGMGYLES 133
Query: 127 YTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV 186
++HRD+ N+LL + KI DFGL++ L + + F + APE +
Sbjct: 134 KR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 190
Query: 187 RDGCVTTKSDVYAFGVVLMELIT-GQQA 213
+ + SD + FGV L E+ T GQ+
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 14 FSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTK-SKEFSSELKILCKVHSNLIELIGYA 72
F+ +I V+ GK+ K+ +K + K S E S + H +++ G+
Sbjct: 54 FAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL---AHQHVVGFHGFF 110
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
D +F+V E + +L + LH +P A QI L G +Y+H+
Sbjct: 111 EDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVL----GCQYLHRNR---V 162
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVT 192
+HRD+K N+ L+ + KI DFGL +E+ E + GT Y+APE + +
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSKKGHS 219
Query: 193 TKSDVYAFGVVLMELITGQQAL 214
+ DV++ G ++ L+ G+
Sbjct: 220 FEVDVWSIGCIMYTLLVGKPPF 241
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 54 ELKILCKV--HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRV 111
E IL +V H ++I LI +FLV++ + G L D+L K L+
Sbjct: 149 ETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL-----TEKVALSEKETR 203
Query: 112 QIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAA 171
I + + ++H VHRD+K NILLD N + +++DFG LE ++
Sbjct: 204 SIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKL---- 256
Query: 172 SRIVGTFGYLAPEYVRDGCVTT------KSDVYAFGVVLMELITG 210
+ GT GYLAPE ++ T + D++A GV+L L+ G
Sbjct: 257 RELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 14 FSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTK-SKEFSSELKILCKVHSNLIELIGYA 72
F+ +I V+ GK+ K+ +K + K S E S + H +++ G+
Sbjct: 28 FAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL---AHQHVVGFHGFF 84
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
D +F+V E + +L + LH +P A QI L G +Y+H+
Sbjct: 85 EDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVL----GCQYLHRNR---V 136
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVT 192
+HRD+K N+ L+ + KI DFGL +E+ E + GT Y+APE + +
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSKKGHS 193
Query: 193 TKSDVYAFGVVLMELITGQQAL 214
+ DV++ G ++ L+ G+
Sbjct: 194 FEVDVWSIGCIMYTLLVGKPPF 215
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 19 KIGQGSYGSVYLGKL---RGK--NAAIKQMKN------TKSKEFSSELKILCKV-HSNLI 66
K+G GS+G V G+ GK + A+K +K +F E+ + + H NLI
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ 126
L G + +V E A G+L D L K + T + A+ A+G+ Y+
Sbjct: 85 RLYGVVLT-PPMKMVTELAPLGSLLDRLR----KHQGHFLLGTLSRYAVQVAEGMGYLES 139
Query: 127 YTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV 186
++HRD+ N+LL + KI DFGL++ L + + F + APE +
Sbjct: 140 KR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 196
Query: 187 RDGCVTTKSDVYAFGVVLMELIT-GQQA 213
+ + SD + FGV L E+ T GQ+
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 104/214 (48%), Gaps = 21/214 (9%)
Query: 5 NEVRDATSNFSTSLKIGQGSYGSVYL------GKLRGKNAAIKQMKNTKSKEFSSELKIL 58
E++D +F ++G G+ G V+ G + + ++K + EL++L
Sbjct: 63 GELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 120
Query: 59 CKVHSN-LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
+ +S ++ G + + E+ G+L L G+ P +V IA+
Sbjct: 121 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK---AGRIPEQILGKVSIAV-- 175
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGT 177
KGL Y+ + K +HRDVK SNIL++S K+ DFG+ L I + A+ VGT
Sbjct: 176 IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL-----IDSMANSFVGT 228
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQ 211
Y++PE ++ + +SD+++ G+ L+E+ G+
Sbjct: 229 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 19 KIGQGSYGSVYLGKL---RGK--NAAIKQMKN------TKSKEFSSELKILCKV-HSNLI 66
K+G GS+G V G+ GK + A+K +K +F E+ + + H NLI
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ 126
L G + +V E A G+L D L K + T + A+ A+G+ Y+
Sbjct: 79 RLYGVVLT-PPMKMVTELAPLGSLLDRLR----KHQGHFLLGTLSRYAVQVAEGMGYLES 133
Query: 127 YTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV 186
++HRD+ N+LL + KI DFGL++ L + + F + APE +
Sbjct: 134 KR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 190
Query: 187 RDGCVTTKSDVYAFGVVLMELIT-GQQA 213
+ + SD + FGV L E+ T GQ+
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 91/218 (41%), Gaps = 21/218 (9%)
Query: 8 RDATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMK--------NTKSKEFSSELKI 57
R NF +G+GS+G V L +++ G A+K +K + + +
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILS 78
Query: 58 LCKVHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
L + H L +L D LF V E+ G L H+ K ++ R A +
Sbjct: 79 LARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQ----KSRRFDEARARFYAA-EI 133
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGT 177
L ++H ++RD+K N+LLD K+ADFG+ K + GT
Sbjct: 134 ISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCK---EGICNGVTTATFCGT 187
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALS 215
Y+APE +++ D +A GV+L E++ G
Sbjct: 188 PDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 87/201 (43%), Gaps = 20/201 (9%)
Query: 20 IGQGSYGSVYL--GKLRGKNAAIKQMKNT------KSKEFSSELKILCKVHSNLIELIGY 71
+G+G++G V L K G+ A+K ++ + +E ++L + + Y
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 72 A-AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
A D L V EYA G L HL V ++ + + LEY+H
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-----YGAEIVSALEYLHSRD-- 125
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
V+RD+K N++LD + KI DFGL K A GT YLAPE + D
Sbjct: 126 -VVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 191 VTTKSDVYAFGVVLMELITGQ 211
D + GVV+ E++ G+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGR 202
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 87/201 (43%), Gaps = 20/201 (9%)
Query: 20 IGQGSYGSVYL--GKLRGKNAAIKQMKNT------KSKEFSSELKILCKVHSNLIELIGY 71
+G+G++G V L K G+ A+K ++ + +E ++L + + Y
Sbjct: 18 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 77
Query: 72 A-AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
A D L V EYA G L HL V ++ + + LEY+H
Sbjct: 78 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-----YGAEIVSALEYLHSRD-- 130
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
V+RD+K N++LD + KI DFGL K A GT YLAPE + D
Sbjct: 131 -VVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAPEVLEDND 186
Query: 191 VTTKSDVYAFGVVLMELITGQ 211
D + GVV+ E++ G+
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGR 207
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 110/241 (45%), Gaps = 33/241 (13%)
Query: 10 ATSNFSTSLKIGQGSYGSVY--LGKLRGKNAAIKQMK--------NTKSKEFS--SELKI 57
++S F K+G G+Y +VY L K G A+K++K +T +E S ELK
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK- 61
Query: 58 LCKVHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKP--LAWTTRVQIAL 115
H N++ L + L LV+E+ N L ++ +V G P L
Sbjct: 62 ----HENIVRLYDVIHTENKLTLVFEFMDND-LKKYMDSRTV-GNTPRGLELNLVKYFQW 115
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
+GL + H+ +HRD+K N+L++ + K+ DFGL + + +S +V
Sbjct: 116 QLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAF--GIPVNTFSSEVV 170
Query: 176 GTFGYLAPEYVRDG-CVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDY 234
T Y AP+ + +T D+++ G +L E+ITG+ PG N + + + D
Sbjct: 171 -TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLF-----PGTNDEEQLKLIFDI 224
Query: 235 M 235
M
Sbjct: 225 M 225
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 104/214 (48%), Gaps = 21/214 (9%)
Query: 5 NEVRDATSNFSTSLKIGQGSYGSVYL------GKLRGKNAAIKQMKNTKSKEFSSELKIL 58
E++D +F ++G G+ G V+ G + + ++K + EL++L
Sbjct: 28 GELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 85
Query: 59 CKVHSN-LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
+ +S ++ G + + E+ G+L L G+ P +V IA+
Sbjct: 86 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK---AGRIPEQILGKVSIAV-- 140
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGT 177
KGL Y+ + K +HRDVK SNIL++S K+ DFG+ L I + A+ VGT
Sbjct: 141 IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL-----IDSMANSFVGT 193
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQ 211
Y++PE ++ + +SD+++ G+ L+E+ G+
Sbjct: 194 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 104/213 (48%), Gaps = 21/213 (9%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSVYL------GKLRGKNAAIKQMKNTKSKEFSSELKILC 59
E++D +F ++G G+ G V+ G + + ++K + EL++L
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 60 KVHSN-LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAA 118
+ +S ++ G + + E+ G+L L G+ P +V IA+
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK---AGRIPEQILGKVSIAV--I 114
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTF 178
KGL Y+ + K +HRDVK SNIL++S K+ DFG+ L I + A+ VGT
Sbjct: 115 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL-----IDSMANSFVGTR 167
Query: 179 GYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQ 211
Y++PE ++ + +SD+++ G+ L+E+ G+
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 104/213 (48%), Gaps = 21/213 (9%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSVYL------GKLRGKNAAIKQMKNTKSKEFSSELKILC 59
E++D +F ++G G+ G V+ G + + ++K + EL++L
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 60 KVHSN-LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAA 118
+ +S ++ G + + E+ G+L L G+ P +V IA+
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK---AGRIPEQILGKVSIAV--I 114
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTF 178
KGL Y+ + K +HRDVK SNIL++S K+ DFG+ L I + A+ VGT
Sbjct: 115 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL-----IDSMANSFVGTR 167
Query: 179 GYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQ 211
Y++PE ++ + +SD+++ G+ L+E+ G+
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 104/213 (48%), Gaps = 21/213 (9%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSVYL------GKLRGKNAAIKQMKNTKSKEFSSELKILC 59
E++D +F ++G G+ G V+ G + + ++K + EL++L
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 60 KVHSN-LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAA 118
+ +S ++ G + + E+ G+L L G+ P +V IA+
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK---AGRIPEQILGKVSIAV--I 114
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTF 178
KGL Y+ + K +HRDVK SNIL++S K+ DFG+ L I + A+ VGT
Sbjct: 115 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL-----IDSMANSFVGTR 167
Query: 179 GYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQ 211
Y++PE ++ + +SD+++ G+ L+E+ G+
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 104/213 (48%), Gaps = 21/213 (9%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSVYL------GKLRGKNAAIKQMKNTKSKEFSSELKILC 59
E++D +F ++G G+ G V+ G + + ++K + EL++L
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 60 KVHSN-LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAA 118
+ +S ++ G + + E+ G+L L G+ P +V IA+
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK---AGRIPEQILGKVSIAV--I 114
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTF 178
KGL Y+ + K +HRDVK SNIL++S K+ DFG+ L I + A+ VGT
Sbjct: 115 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL-----IDSMANSFVGTR 167
Query: 179 GYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQ 211
Y++PE ++ + +SD+++ G+ L+E+ G+
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 119/275 (43%), Gaps = 32/275 (11%)
Query: 5 NEVRDATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQM------KNTKSKEFSSELK 56
EVR +F IG+G++ V + K++ G+ A+K M K + F E
Sbjct: 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERD 113
Query: 57 ILCKVHSNLIELIGYAAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIAL 115
+L I + +A ++ L+LV EY G L L S G++ A R +A
Sbjct: 114 VLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLL---SKFGERIPAEMARFYLA- 169
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
+ ++ +H+ YVHRD+K NILLD ++ADFG L + + + V
Sbjct: 170 EIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVA--V 224
Query: 176 GTFGYLAPEYVR-------DGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNN----Q 224
GT YL+PE ++ G + D +A GV E+ GQ D+
Sbjct: 225 GTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVH 284
Query: 225 YTEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTR 259
Y EH SL V + +DF+ +L L P TR
Sbjct: 285 YKEHLSLPLVDEGVPEEARDFIQRL---LCPPETR 316
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 87/201 (43%), Gaps = 20/201 (9%)
Query: 20 IGQGSYGSVYL--GKLRGKNAAIKQMKNT------KSKEFSSELKILCKVHSNLIELIGY 71
+G+G++G V L K G+ A+K ++ + +E ++L + + Y
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 72 A-AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
A D L V EYA G L HL V ++ + + LEY+H
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-----YGAEIVSALEYLHSRD-- 125
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
V+RD+K N++LD + KI DFGL K A GT YLAPE + D
Sbjct: 126 -VVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 191 VTTKSDVYAFGVVLMELITGQ 211
D + GVV+ E++ G+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGR 202
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 20/199 (10%)
Query: 20 IGQGSYGSVYLGKLRGKN-----AAIKQMKNTKS----KEFSSELKILCKV-HSNLIELI 69
IG+G +G V+ G AIK KN S ++F E + + H ++++LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTK 129
G + ++++ E G L L K L + + A + L Y+
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQ----VRKFSLDLASLILYAYQLSTALAYLESKR- 131
Query: 130 PYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG 189
+VHRD+ N+L+ SN K+ DFGL + +E S A+ ++ ++APE +
Sbjct: 132 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKL--PIKWMAPESINFR 187
Query: 190 CVTTKSDVYAFGVVLMELI 208
T+ SDV+ FGV + E++
Sbjct: 188 RFTSASDVWMFGVCMWEIL 206
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 87/201 (43%), Gaps = 20/201 (9%)
Query: 20 IGQGSYGSVYL--GKLRGKNAAIKQMKNT------KSKEFSSELKILCKVHSNLIELIGY 71
+G+G++G V L K G+ A+K ++ + +E ++L + + Y
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 72 A-AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
A D L V EYA G L HL V ++ + + LEY+H
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-----YGAEIVSALEYLHSRD-- 125
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
V+RD+K N++LD + KI DFGL K A GT YLAPE + D
Sbjct: 126 -VVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAPEVLEDND 181
Query: 191 VTTKSDVYAFGVVLMELITGQ 211
D + GVV+ E++ G+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGR 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 87/201 (43%), Gaps = 20/201 (9%)
Query: 20 IGQGSYGSVYL--GKLRGKNAAIKQMKNT------KSKEFSSELKILCKVHSNLIELIGY 71
+G+G++G V L K G+ A+K ++ + +E ++L + + Y
Sbjct: 16 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 75
Query: 72 A-AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
A D L V EYA G L HL V ++ + + LEY+H
Sbjct: 76 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-----YGAEIVSALEYLHSRD-- 128
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
V+RD+K N++LD + KI DFGL K A GT YLAPE + D
Sbjct: 129 -VVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKTFCGTPEYLAPEVLEDND 184
Query: 191 VTTKSDVYAFGVVLMELITGQ 211
D + GVV+ E++ G+
Sbjct: 185 YGRAVDWWGLGVVMYEMMCGR 205
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 87/201 (43%), Gaps = 20/201 (9%)
Query: 20 IGQGSYGSVYL--GKLRGKNAAIKQMKNT------KSKEFSSELKILCKVHSNLIELIGY 71
+G+G++G V L K G+ A+K ++ + +E ++L + + Y
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 72 A-AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
A D L V EYA G L HL V ++ + + LEY+H
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-----YGAEIVSALEYLHSRD-- 125
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
V+RD+K N++LD + KI DFGL K A GT YLAPE + D
Sbjct: 126 -VVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKTFCGTPEYLAPEVLEDND 181
Query: 191 VTTKSDVYAFGVVLMELITGQ 211
D + GVV+ E++ G+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGR 202
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 30/207 (14%)
Query: 20 IGQGSYGSVYLGKLR----GKNAAIKQ-----MKNTKSKEFSSELKILCKV-HSNLIELI 69
IG GSYG K+R GK K+ M + + SE+ +L ++ H N++
Sbjct: 14 IGTGSYGRC--QKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 70 GYAAG--GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAW-----TTRVQIALDAAKGLE 122
+L++V EY + G L+ + KG K + RV L A L+
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVI----TKGTKERQYLDEEFVLRVMTQLTLA--LK 125
Query: 123 YIHQYTKPYY--VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
H+ + + +HRD+K +N+ LD K+ DFGL ++L H A A VGT Y
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKA---FVGTPYY 182
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMEL 207
++PE + KSD+++ G +L EL
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 21/217 (9%)
Query: 2 FSYNEVRDATSNFSTSLKIGQGSYGSVYL------GKLRGKNAAIKQMKNTKSKEFSSEL 55
+ E++D +F ++G G+ G V+ G + + ++K + EL
Sbjct: 1 MALGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIREL 58
Query: 56 KILCKVHSN-LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIA 114
++L + +S ++ G + + E+ G+L L G+ P +V IA
Sbjct: 59 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIPEQILGKVSIA 115
Query: 115 LDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+ KGL Y+ + K +HRDVK SNIL++S K+ DFG+ L I A+
Sbjct: 116 V--IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL-----IDEMANEF 166
Query: 175 VGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQ 211
VGT Y++PE ++ + +SD+++ G+ L+E+ G+
Sbjct: 167 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 87/201 (43%), Gaps = 20/201 (9%)
Query: 20 IGQGSYGSVYL--GKLRGKNAAIKQMKNT------KSKEFSSELKILCKVHSNLIELIGY 71
+G+G++G V L K G+ A+K ++ + +E ++L + + Y
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 72 A-AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
A D L V EYA G L HL V ++ + + LEY+H
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-----YGAEIVSALEYLHSRD-- 125
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
V+RD+K N++LD + KI DFGL K A GT YLAPE + D
Sbjct: 126 -VVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKTFCGTPEYLAPEVLEDND 181
Query: 191 VTTKSDVYAFGVVLMELITGQ 211
D + GVV+ E++ G+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGR 202
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 24/203 (11%)
Query: 20 IGQGSYGSVYLGKLRGKNAAIK-----QMKNTKSKEFSSE------LKILCKVHSNLIEL 68
+G G +G+V+ G + +IK ++ KS S + L I H++++ L
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ 126
+G G SL LV +Y G+L DH+ H ++ + L W ++ AKG+ Y+ +
Sbjct: 99 LGLCPG-SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYYLEE 151
Query: 127 YTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV 186
+ VHR++ N+LL S + ++ADFG+ LL + S ++A E +
Sbjct: 152 HG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPD-DKQLLYSEAKTPIKWMALESI 207
Query: 187 RDGCVTTKSDVYAFGVVLMELIT 209
G T +SDV+++GV + EL+T
Sbjct: 208 HFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 110/251 (43%), Gaps = 30/251 (11%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIKQMKNT---KSKEFSSELKILCKV-HSNLIELIGYAA 73
+G G++ V+L K R GK A+K +K + + +E+ +L K+ H N++ L
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYE 76
Query: 74 GGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYV 133
+LV + G L D + V +K + +Q L A K Y+H+ V
Sbjct: 77 STTHYYLVMQLVSGGELFDRILERGVYTEKDASLV--IQQVLSAVK---YLHENG---IV 128
Query: 134 HRDVKTSNILL---DSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
HRD+K N+L + N + I DFGL K+ E S GT GY+APE +
Sbjct: 129 HRDLKPENLLYLTPEENSKIMITDFGLSKM-----EQNGIMSTACGTPGYVAPEVLAQKP 183
Query: 191 VTTKSDVYAFGVVLMELITG-----QQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDF 245
+ D ++ GV+ L+ G ++ S+ Y E S + + KDF
Sbjct: 184 YSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFES--PFWDDISESAKDF 241
Query: 246 MAKLTECLDPN 256
+ L E DPN
Sbjct: 242 ICHLLE-KDPN 251
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 112/252 (44%), Gaps = 35/252 (13%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIKQMKNTKSKEFSS------ELKILCKVHSNLIELIGY 71
+G+G +G V+ +++ GK A K++ + K+ E KIL KVHS I + Y
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHW-----PSVKGKKPLAWTTRVQIALDAAKGLEYIH 125
A + L LV G + H++ P + + + +T ++ GLE++H
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI------VSGLEHLH 306
Query: 126 QYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI---VGTFGYLA 182
Q ++RD+K N+LLD + +I+D GL + E+ A ++ GT G++A
Sbjct: 307 QRN---IIYRDLKPENVLLDDDGNVRISDLGL------AVELKAGQTKTKGYAGTPGFMA 357
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSL---VDYMLAVF 239
PE + D +A GV L E+I + N+ + R L V Y
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFS 417
Query: 240 NDTKDFMAKLTE 251
+KDF L +
Sbjct: 418 PASKDFCEALLQ 429
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 112/252 (44%), Gaps = 35/252 (13%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIKQMKNTKSKEFSS------ELKILCKVHSNLIELIGY 71
+G+G +G V+ +++ GK A K++ + K+ E KIL KVHS I + Y
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHW-----PSVKGKKPLAWTTRVQIALDAAKGLEYIH 125
A + L LV G + H++ P + + + +T ++ GLE++H
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI------VSGLEHLH 306
Query: 126 QYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI---VGTFGYLA 182
Q ++RD+K N+LLD + +I+D GL + E+ A ++ GT G++A
Sbjct: 307 QRN---IIYRDLKPENVLLDDDGNVRISDLGL------AVELKAGQTKTKGYAGTPGFMA 357
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSL---VDYMLAVF 239
PE + D +A GV L E+I + N+ + R L V Y
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFS 417
Query: 240 NDTKDFMAKLTE 251
+KDF L +
Sbjct: 418 PASKDFCEALLQ 429
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 112/252 (44%), Gaps = 35/252 (13%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIKQMKNTKSKEFSS------ELKILCKVHSNLIELIGY 71
+G+G +G V+ +++ GK A K++ + K+ E KIL KVHS I + Y
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHW-----PSVKGKKPLAWTTRVQIALDAAKGLEYIH 125
A + L LV G + H++ P + + + +T ++ GLE++H
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI------VSGLEHLH 306
Query: 126 QYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI---VGTFGYLA 182
Q ++RD+K N+LLD + +I+D GL + E+ A ++ GT G++A
Sbjct: 307 QRN---IIYRDLKPENVLLDDDGNVRISDLGL------AVELKAGQTKTKGYAGTPGFMA 357
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSL---VDYMLAVF 239
PE + D +A GV L E+I + N+ + R L V Y
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFS 417
Query: 240 NDTKDFMAKLTE 251
+KDF L +
Sbjct: 418 PASKDFCEALLQ 429
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 20/199 (10%)
Query: 20 IGQGSYGSVYLGKLRGKN-----AAIKQMKNTKS----KEFSSELKILCKV-HSNLIELI 69
IG+G +G V+ G AIK KN S ++F E + + H ++++LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTK 129
G + ++++ E G L L K L + + A + L Y+
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLESKR- 131
Query: 130 PYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG 189
+VHRD+ N+L+ SN K+ DFGL + +E S A+ ++ ++APE +
Sbjct: 132 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFR 187
Query: 190 CVTTKSDVYAFGVVLMELI 208
T+ SDV+ FGV + E++
Sbjct: 188 RFTSASDVWMFGVCMWEIL 206
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 24/203 (11%)
Query: 20 IGQGSYGSVYLGKLRGKNAAIK-----QMKNTKSKEFSSE------LKILCKVHSNLIEL 68
+G G +G+V+ G + +IK ++ KS S + L I H++++ L
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ 126
+G G SL LV +Y G+L DH+ H ++ + L W ++ AKG+ Y+ +
Sbjct: 81 LGLCPG-SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYYLEE 133
Query: 127 YTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV 186
+ VHR++ N+LL S + ++ADFG+ LL + S ++A E +
Sbjct: 134 HG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPD-DKQLLYSEAKTPIKWMALESI 189
Query: 187 RDGCVTTKSDVYAFGVVLMELIT 209
G T +SDV+++GV + EL+T
Sbjct: 190 HFGKYTHQSDVWSYGVTVWELMT 212
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 13 NFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQM------KNTKSKEFSSELKILCKVH-S 63
+F +G+G +G+VYL + + + A+K + K + E++I +H
Sbjct: 24 DFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHP 83
Query: 64 NLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEY 123
N++ L Y ++L+ EYA G L L ++ A I + A L Y
Sbjct: 84 NILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTA-----TIMEELADALMY 138
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
H +HRD+K N+LL KIADFG H+P + + GT YL P
Sbjct: 139 CHGKK---VIHRDIKPENLLLGLKGELKIADFGWSV---HAPSLRRKT--MCGTLDYLPP 190
Query: 184 EYVRDGCVTTKSDVYAFGVVLMELITG 210
E + K D++ GV+ EL+ G
Sbjct: 191 EMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 112/252 (44%), Gaps = 35/252 (13%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIKQMKNTKSKEFSS------ELKILCKVHSNLIELIGY 71
+G+G +G V+ +++ GK A K++ + K+ E KIL KVHS I + Y
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHW-----PSVKGKKPLAWTTRVQIALDAAKGLEYIH 125
A + L LV G + H++ P + + + +T ++ GLE++H
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI------VSGLEHLH 306
Query: 126 QYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI---VGTFGYLA 182
Q ++RD+K N+LLD + +I+D GL + E+ A ++ GT G++A
Sbjct: 307 QRN---IIYRDLKPENVLLDDDGNVRISDLGL------AVELKAGQTKTKGYAGTPGFMA 357
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSL---VDYMLAVF 239
PE + D +A GV L E+I + N+ + R L V Y
Sbjct: 358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFS 417
Query: 240 NDTKDFMAKLTE 251
+KDF L +
Sbjct: 418 PASKDFCEALLQ 429
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 20/199 (10%)
Query: 20 IGQGSYGSVYLGKLRGKN-----AAIKQMKNTKS----KEFSSELKILCKV-HSNLIELI 69
IG+G +G V+ G AIK KN S ++F E + + H ++++LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTK 129
G + ++++ E G L L K L + + A + L Y+
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLESKR- 131
Query: 130 PYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG 189
+VHRD+ N+L+ SN K+ DFGL + +E S A+ ++ ++APE +
Sbjct: 132 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFR 187
Query: 190 CVTTKSDVYAFGVVLMELI 208
T+ SDV+ FGV + E++
Sbjct: 188 RFTSASDVWMFGVCMWEIL 206
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 137/296 (46%), Gaps = 26/296 (8%)
Query: 19 KIGQGSYGSVYLGKLRGKNA-AIKQMKNTKSKE----FSSELKILCKV-HSNLIELIGYA 72
++G G++G VY + + + A ++ +TKS+E + E+ IL H N+++L+
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
++L+++ E+ GA+ + ++ ++PL T QI + + L+ ++
Sbjct: 104 YYENNLWILIEFCAGGAVDAVM----LELERPL---TESQIQVVCKQTLDALNYLHDNKI 156
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV-----R 187
+HRD+K NIL + K+ADFG+ + +GT ++APE V +
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSA---KNTRTIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 188 DGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDFMA 247
D K+DV++ G+ L+E+ + + NP +S + + +F
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEPP-HHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKD 272
Query: 248 KLTECLDPNL-TRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSKE 302
L +CL+ N+ R+ +LQ ++ VD N R ++ A ++ + KE
Sbjct: 273 FLKKCLEKNVDARWTTSQLLQHPFVT---VDSNKPIRELIAEAKAEVTEEVEDGKE 325
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 119/271 (43%), Gaps = 40/271 (14%)
Query: 20 IGQGSYGSVYLGK--LRGKNAAIKQMKNTKSKEFSSELKILCKV-----HSNLIELIGYA 72
+ +G + VY + G+ A+K++ + + ++ + ++ +C + H N+++ A
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA 95
Query: 73 A-------GGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIH 125
+ G + FL+ G L + L ++ + PL+ T ++I + ++++H
Sbjct: 96 SIGKEESDTGQAEFLLLTELCKGQLVEFLK--KMESRGPLSCDTVLKIFYQTCRAVQHMH 153
Query: 126 QYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIV---------G 176
+ KP +HRD+K N+LL + K+ DFG + H P+ + +A R
Sbjct: 154 R-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNT 212
Query: 177 TFGYLAPEYV---RDGCVTTKSDVYAFGVVLMELITGQQALSRDAN-----------PGN 222
T Y PE + + + K D++A G +L L Q A P +
Sbjct: 213 TPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKYSIPPHD 272
Query: 223 NQYTEHRSLVDYMLAVFNDTKDFMAKLTECL 253
QYT SL+ ML V + + +A++ L
Sbjct: 273 TQYTVFHSLIRAMLQVNPEERLSIAEVVHQL 303
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 98/215 (45%), Gaps = 30/215 (13%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLR----GKNAAIKQ-----MKNTKSKEFSSELKILCKV- 61
++ IG GSYG K+R GK K+ M + + SE+ +L ++
Sbjct: 6 EDYEVLYTIGTGSYGRC--QKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK 63
Query: 62 HSNLIELIGYAAG--GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAW-----TTRVQIA 114
H N++ +L++V EY + G L+ + KG K + RV
Sbjct: 64 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI----TKGTKERQYLDEEFVLRVMTQ 119
Query: 115 LDAAKGLEYIHQYTKPYY--VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAAS 172
L A L+ H+ + + +HRD+K +N+ LD K+ DFGL ++L H + A
Sbjct: 120 LTLA--LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDF---AK 174
Query: 173 RIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMEL 207
VGT Y++PE + KSD+++ G +L EL
Sbjct: 175 EFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 20/199 (10%)
Query: 20 IGQGSYGSVYLGKLRGKN-----AAIKQMKNTKS----KEFSSELKILCKV-HSNLIELI 69
IG+G +G V+ G AIK KN S ++F E + + H ++++LI
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTK 129
G + ++++ E G L L K L + + A + L Y+
Sbjct: 75 GVITE-NPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLESKR- 128
Query: 130 PYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG 189
+VHRD+ N+L+ SN K+ DFGL + +E S A+ ++ ++APE +
Sbjct: 129 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFR 184
Query: 190 CVTTKSDVYAFGVVLMELI 208
T+ SDV+ FGV + E++
Sbjct: 185 RFTSASDVWMFGVCMWEIL 203
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 137/296 (46%), Gaps = 26/296 (8%)
Query: 19 KIGQGSYGSVYLGKLRGKNA-AIKQMKNTKSKE----FSSELKILCKV-HSNLIELIGYA 72
++G G++G VY + + + A ++ +TKS+E + E+ IL H N+++L+
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
++L+++ E+ GA+ + ++ ++PL T QI + + L+ ++
Sbjct: 104 YYENNLWILIEFCAGGAVDAVM----LELERPL---TESQIQVVCKQTLDALNYLHDNKI 156
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV-----R 187
+HRD+K NIL + K+ADFG+ + +GT ++APE V +
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSA---KNTRXIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 188 DGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDFMA 247
D K+DV++ G+ L+E+ + + NP +S + + +F
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEPP-HHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKD 272
Query: 248 KLTECLDPNL-TRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSKE 302
L +CL+ N+ R+ +LQ ++ VD N R ++ A ++ + KE
Sbjct: 273 FLKKCLEKNVDARWTTSQLLQHPFVT---VDSNKPIRELIAEAKAEVTEEVEDGKE 325
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 137/296 (46%), Gaps = 26/296 (8%)
Query: 19 KIGQGSYGSVYLGKLRGKNA-AIKQMKNTKSKE----FSSELKILCKV-HSNLIELIGYA 72
++G G++G VY + + + A ++ +TKS+E + E+ IL H N+++L+
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
++L+++ E+ GA+ + ++ ++PL T QI + + L+ ++
Sbjct: 104 YYENNLWILIEFCAGGAVDAVM----LELERPL---TESQIQVVCKQTLDALNYLHDNKI 156
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV-----R 187
+HRD+K NIL + K+ADFG+ + +GT ++APE V +
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSA---KNTRXIQRRDXFIGTPYWMAPEVVMCETSK 213
Query: 188 DGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDFMA 247
D K+DV++ G+ L+E+ + + NP +S + + +F
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEPP-HHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKD 272
Query: 248 KLTECLDPNL-TRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSKE 302
L +CL+ N+ R+ +LQ ++ VD N R ++ A ++ + KE
Sbjct: 273 FLKKCLEKNVDARWTTSQLLQHPFVT---VDSNKPIRELIAEAKAEVTEEVEDGKE 325
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 104/214 (48%), Gaps = 21/214 (9%)
Query: 5 NEVRDATSNFSTSLKIGQGSYGSVYL------GKLRGKNAAIKQMKNTKSKEFSSELKIL 58
E++D +F ++G G+ G V+ G + + ++K + EL++L
Sbjct: 20 GELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 77
Query: 59 CKVHSN-LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA 117
+ +S ++ G + + E+ G+L L G+ P +V IA+
Sbjct: 78 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK---AGRIPEQILGKVSIAV-- 132
Query: 118 AKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGT 177
KGL Y+ + K +HRDVK SNIL++S K+ DFG+ L I + A+ VGT
Sbjct: 133 IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL-----IDSMANSFVGT 185
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQ 211
Y++PE ++ + +SD+++ G+ L+E+ G+
Sbjct: 186 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 20/199 (10%)
Query: 20 IGQGSYGSVYLGKLRGKN-----AAIKQMKNTKS----KEFSSELKILCKV-HSNLIELI 69
IG+G +G V+ G AIK KN S ++F E + + H ++++LI
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTK 129
G + ++++ E G L L K L + + A + L Y+
Sbjct: 106 GVITE-NPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLESKR- 159
Query: 130 PYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG 189
+VHRD+ N+L+ SN K+ DFGL + +E S A+ ++ ++APE +
Sbjct: 160 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFR 215
Query: 190 CVTTKSDVYAFGVVLMELI 208
T+ SDV+ FGV + E++
Sbjct: 216 RFTSASDVWMFGVCMWEIL 234
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 20/199 (10%)
Query: 20 IGQGSYGSVYLGKLRGKN-----AAIKQMKNTKS----KEFSSELKILCKV-HSNLIELI 69
IG+G +G V+ G AIK KN S ++F E + + H ++++LI
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTK 129
G + ++++ E G L L K L + + A + L Y+
Sbjct: 80 GVITE-NPVWIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLESKR- 133
Query: 130 PYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG 189
+VHRD+ N+L+ SN K+ DFGL + +E S A+ ++ ++APE +
Sbjct: 134 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFR 189
Query: 190 CVTTKSDVYAFGVVLMELI 208
T+ SDV+ FGV + E++
Sbjct: 190 RFTSASDVWMFGVCMWEIL 208
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 20/199 (10%)
Query: 20 IGQGSYGSVYLGKLRGKN-----AAIKQMKNTKS----KEFSSELKILCKV-HSNLIELI 69
IG+G +G V+ G AIK KN S ++F E + + H ++++LI
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTK 129
G + ++++ E G L L V+ K L + + A + L Y+
Sbjct: 83 GVITE-NPVWIIMELCTLGELRSFLQ---VR-KYSLDLASLILYAYQLSTALAYLESKR- 136
Query: 130 PYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG 189
+VHRD+ N+L+ SN K+ DFGL + +E S A+ ++ ++APE +
Sbjct: 137 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFR 192
Query: 190 CVTTKSDVYAFGVVLMELI 208
T+ SDV+ FGV + E++
Sbjct: 193 RFTSASDVWMFGVCMWEIL 211
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGK--LRGKNAAIKQMKNTKSKE-----FSSELKILCKV- 61
ATS + +IG G+YG+VY + G A+K ++ +E E+ +L ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 62 ---HSNLIELIGYAAGGDS-----LFLVYEYAQNGALSDHLHWPSVKGKKP-LAWTTRVQ 112
H N++ L+ A + + LV+E+ L +L K P L T
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLD----KAPPPGLPAETIKD 116
Query: 113 IALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAAS 172
+ +GL+++H VHRD+K NIL+ S K+ADFGL ++ + A +
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ----MALA 169
Query: 173 RIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELI 208
+V T Y APE + T D+++ G + E+
Sbjct: 170 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 20/209 (9%)
Query: 20 IGQGSYGSVY--LGKLRGKNAAIKQMKNTKSKEFSS-----ELKILCKV-HSNLIELIGY 71
+G+GSYG V K G+ AIK+ + + E+K+L ++ H NL+ L+
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 72 AAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPY 131
+LV+E+ + L D +P+ L + + G+ + H +
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDLELFPN-----GLDYQVVQKYLFQIINGIGFCHSHN--- 144
Query: 132 YVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE-YVRDGC 190
+HRD+K NIL+ + K+ DFG + L E+ V T Y APE V D
Sbjct: 145 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE---VATRWYRAPELLVGDVK 201
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRDAN 219
DV+A G ++ E+ G+ D++
Sbjct: 202 YGKAVDVWAIGCLVTEMFMGEPLFPGDSD 230
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 20/199 (10%)
Query: 20 IGQGSYGSVYLGKLRGKN-----AAIKQMKNTKS----KEFSSELKILCKV-HSNLIELI 69
IG+G +G V+ G AIK KN S ++F E + + H ++++LI
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTK 129
G + ++++ E G L L V+ K L + + A + L Y+
Sbjct: 81 GVITE-NPVWIIMELCTLGELRSFLQ---VR-KYSLDLASLILYAYQLSTALAYLESKR- 134
Query: 130 PYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG 189
+VHRD+ N+L+ SN K+ DFGL + +E S A+ ++ ++APE +
Sbjct: 135 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFR 190
Query: 190 CVTTKSDVYAFGVVLMELI 208
T+ SDV+ FGV + E++
Sbjct: 191 RFTSASDVWMFGVCMWEIL 209
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 96/207 (46%), Gaps = 30/207 (14%)
Query: 20 IGQGSYGSVYLGKLR----GKNAAIKQ-----MKNTKSKEFSSELKILCKV-HSNLIELI 69
IG GSYG K+R GK K+ M + + SE+ +L ++ H N++
Sbjct: 14 IGTGSYGRC--QKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 70 GYAAG--GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAW-----TTRVQIALDAAKGLE 122
+L++V EY + G L+ + KG K + RV L A L+
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVI----TKGTKERQYLDEEFVLRVMTQLTLA--LK 125
Query: 123 YIHQYTKPYY--VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
H+ + + +HRD+K +N+ LD K+ DFGL ++L H + A VGT Y
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD---TSFAKTFVGTPYY 182
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMEL 207
++PE + KSD+++ G +L EL
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGK--LRGKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K G + A+K + K K KE +E +IL V+ + + +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EYA G + HL + +P A QI L EY+H
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 161
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+++D K+ DFGL K + + GT YLAPE +
Sbjct: 162 -LIYRDLKPENLMIDQQGYIKVTDFGLAK------RVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 27/216 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKNA--AIK------QMKNTKSKEFSSELKILCKVHS 63
+F IG+G++G V + K++ A+K +K ++ F E +L
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 133
Query: 64 NLIELIGYAAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLA--WTTRVQIALDAAKG 120
I + YA ++ L+LV +Y G L L K + +A + + +A+D+
Sbjct: 134 QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDS--- 190
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
IHQ +YVHRD+K N+LLD N ++ADFG L+ + + +S VGT Y
Sbjct: 191 ---IHQL---HYVHRDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSSVAVGTPDY 242
Query: 181 LAPEYVRD-----GCVTTKSDVYAFGVVLMELITGQ 211
++PE ++ G + D ++ GV + E++ G+
Sbjct: 243 ISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGK--LRGKNAAIKQMKNTKSKE-----FSSELKILCKV- 61
ATS + +IG G+YG+VY + G A+K ++ +E E+ +L ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 62 ---HSNLIELIGYAAGGDS-----LFLVYEYAQNGALSDHLHWPSVKGKKP-LAWTTRVQ 112
H N++ L+ A + + LV+E+ L +L K P L T
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLD----KAPPPGLPAETIKD 116
Query: 113 IALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAAS 172
+ +GL+++H VHRD+K NIL+ S K+ADFGL ++ + A
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ----MALD 169
Query: 173 RIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELI 208
+V T Y APE + T D+++ G + E+
Sbjct: 170 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 20/199 (10%)
Query: 20 IGQGSYGSVYLGKLRGKN-----AAIKQMKNTKS----KEFSSELKILCKV-HSNLIELI 69
IG+G +G V+ G AIK KN S ++F E + + H ++++LI
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTK 129
G + ++++ E G L L K L + + A + L Y+
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFLQ----VRKFSLDLASLILYAYQLSTALAYLESKR- 511
Query: 130 PYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG 189
+VHRD+ N+L+ SN K+ DFGL + +E S A+ ++ ++APE +
Sbjct: 512 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFR 567
Query: 190 CVTTKSDVYAFGVVLMELI 208
T+ SDV+ FGV + E++
Sbjct: 568 RFTSASDVWMFGVCMWEIL 586
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 27/215 (12%)
Query: 13 NFSTSLKIGQGSYGSVYLGKLRGKNA--AIK------QMKNTKSKEFSSELKILCKVHSN 64
+F IG+G++G V + K++ A+K +K ++ F E +L
Sbjct: 91 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ 150
Query: 65 LIELIGYAAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLA--WTTRVQIALDAAKGL 121
I + YA ++ L+LV +Y G L L K + +A + + +A+D+
Sbjct: 151 WITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDS---- 206
Query: 122 EYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYL 181
IHQ +YVHRD+K N+LLD N ++ADFG L+ + + +S VGT Y+
Sbjct: 207 --IHQL---HYVHRDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSSVAVGTPDYI 259
Query: 182 APEYVRD-----GCVTTKSDVYAFGVVLMELITGQ 211
+PE ++ G + D ++ GV + E++ G+
Sbjct: 260 SPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 107/238 (44%), Gaps = 32/238 (13%)
Query: 3 SYNEVRDATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKN-----TKSKEFSSEL 55
S++ D + IG G+YG V + R G+ AIK++ N T +K EL
Sbjct: 45 SFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLREL 104
Query: 56 KILCKV-HSNLIEL-------IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAW 107
KIL H N+I + + Y S+++V + ++ LH + +PL
Sbjct: 105 KILKHFKHDNIIAIKDILRPTVPYGEF-KSVYVVLDLMESD-----LHQ-IIHSSQPLTL 157
Query: 108 TTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSP-E 166
+GL+Y+H +HRD+K SN+L++ N KI DFG+ + L SP E
Sbjct: 158 EHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAE 214
Query: 167 IAAAASRIVGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRDANPGNN 223
+ V T Y APE + T++ D+++ G + E++ +Q PG N
Sbjct: 215 HQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF-----PGKN 267
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 111/253 (43%), Gaps = 32/253 (12%)
Query: 20 IGQGSYGSVYLGK-----LRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIELIGYAA 73
+G+G+YG VY G+ +R I + + S+ E+ + + H N+++ +G +
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 74 GGDSLFLVYEYAQNGALSDHLH--WPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPY 131
+ + E G+LS L W +K + QI +GL+Y+H
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL----EGLKYLHDNQ--- 142
Query: 132 YVHRDVKTSNILLDS-NFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
VHRD+K N+L+++ + KI+DFG K L I GT Y+APE + G
Sbjct: 143 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG---INPCTETFTGTLQYMAPEIIDKGP 199
Query: 191 --VTTKSDVYAFGVVLMELITGQQALSRDANPGN-----NQYTEHRSLVDYMLAVFNDTK 243
+D+++ G ++E+ TG+ P + H + + M A + K
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSA---EAK 256
Query: 244 DFMAKLTECLDPN 256
F+ K C +P+
Sbjct: 257 AFILK---CFEPD 266
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 19/201 (9%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIKQMKN---TKSKEFS---SELKILCKVHSNLIELIGY 71
+G+G++G V L K + G+ A+K +K E + +E ++L + + Y
Sbjct: 159 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 218
Query: 72 A-AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ D L V EYA G L HL V + + + L+Y+H ++
Sbjct: 219 SFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-----YGAEIVSALDYLH--SEK 271
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
V+RD+K N++LD + KI DFGL K + A GT YLAPE + D
Sbjct: 272 NVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKTFCGTPEYLAPEVLEDND 328
Query: 191 VTTKSDVYAFGVVLMELITGQ 211
D + GVV+ E++ G+
Sbjct: 329 YGRAVDWWGLGVVMYEMMCGR 349
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGK--LRGKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
IG GS+G V L K G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 161
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D K+ADFG K + + GT YLAPE +
Sbjct: 162 -LIYRDLKPENLLIDQQGYIKVADFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 96/231 (41%), Gaps = 29/231 (12%)
Query: 20 IGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKI-----------LCKVHSNLIEL 68
IG+GSY V L +L+ K I MK K + + + I H L+ L
Sbjct: 28 IGRGSYAKVLLVRLK-KTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 86
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT 128
LF V EY G L H+ K + A +I+L L Y+H+
Sbjct: 87 HSCFQTESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISL----ALNYLHERG 141
Query: 129 KPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRD 188
++RD+K N+LLDS K+ D+G+ K S GT Y+APE +R
Sbjct: 142 ---IIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSXFCGTPNYIAPEILRG 195
Query: 189 GCVTTKSDVYAFGVVLMELITGQQALSRDANPGN-NQYTEHRSLVDYMLAV 238
D +A GV++ E++ G+ + N +Q TE DY+ V
Sbjct: 196 EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE-----DYLFQV 241
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 19/201 (9%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIKQMKN---TKSKEFS---SELKILCKVHSNLIELIGY 71
+G+G++G V L K + G+ A+K +K E + +E ++L + + Y
Sbjct: 17 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 76
Query: 72 A-AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ D L V EYA G L HL V + + + L+Y+H ++
Sbjct: 77 SFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-----YGAEIVSALDYLH--SEK 129
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
V+RD+K N++LD + KI DFGL K + A GT YLAPE + D
Sbjct: 130 NVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLAPEVLEDND 186
Query: 191 VTTKSDVYAFGVVLMELITGQ 211
D + GVV+ E++ G+
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGR 207
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 26/204 (12%)
Query: 19 KIGQGSYGSVYLGKLR--GKNAAIKQMKNTKS-----KEFSSELKILCKV-HSNLIELIG 70
KIG+GSYG V+ + R G+ AIK+ ++ K E+++L ++ H NL+ L+
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 71 YAAGGDSLFLVYEYAQNGALSDHLHWPSVKGK---KPLAWTTRVQIALDAAKGLEYIHQY 127
L LV+EY + L + + + K + W T + + + H++
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQT--------LQAVNFCHKH 121
Query: 128 TKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE-YV 186
+HRDVK NIL+ + K+ DFG +LL + V T Y +PE V
Sbjct: 122 N---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE---VATRWYRSPELLV 175
Query: 187 RDGCVTTKSDVYAFGVVLMELITG 210
D DV+A G V EL++G
Sbjct: 176 GDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 19/201 (9%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIKQMKN---TKSKEFS---SELKILCKVHSNLIELIGY 71
+G+G++G V L K + G+ A+K +K E + +E ++L + + Y
Sbjct: 16 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 75
Query: 72 A-AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ D L V EYA G L HL V + + + L+Y+H ++
Sbjct: 76 SFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-----YGAEIVSALDYLH--SEK 128
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
V+RD+K N++LD + KI DFGL K + A GT YLAPE + D
Sbjct: 129 NVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLAPEVLEDND 185
Query: 191 VTTKSDVYAFGVVLMELITGQ 211
D + GVV+ E++ G+
Sbjct: 186 YGRAVDWWGLGVVMYEMMCGR 206
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 19/201 (9%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIKQMKN---TKSKEFS---SELKILCKVHSNLIELIGY 71
+G+G++G V L K + G+ A+K +K E + +E ++L + + Y
Sbjct: 18 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 77
Query: 72 A-AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ D L V EYA G L HL V + + + L+Y+H ++
Sbjct: 78 SFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-----YGAEIVSALDYLH--SEK 130
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
V+RD+K N++LD + KI DFGL K + A GT YLAPE + D
Sbjct: 131 NVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLAPEVLEDND 187
Query: 191 VTTKSDVYAFGVVLMELITGQ 211
D + GVV+ E++ G+
Sbjct: 188 YGRAVDWWGLGVVMYEMMCGR 208
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 112/252 (44%), Gaps = 33/252 (13%)
Query: 3 SYNEVRDATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKN-----TKSKEFSSEL 55
S++ D + IG G+YG V + R G+ AIK++ N T +K EL
Sbjct: 46 SFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLREL 105
Query: 56 KILCKV-HSNLIEL-------IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAW 107
KIL H N+I + + Y S+++V + ++ LH + +PL
Sbjct: 106 KILKHFKHDNIIAIKDILRPTVPYGEF-KSVYVVLDLMESD-----LHQ-IIHSSQPLTL 158
Query: 108 TTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSP-E 166
+GL+Y+H +HRD+K SN+L++ N KI DFG+ + L SP E
Sbjct: 159 EHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAE 215
Query: 167 IAAAASRIVGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRDANPGNNQY 225
+ V T Y APE + T++ D+++ G + E++ +Q PG N Y
Sbjct: 216 HQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF-----PGKN-Y 269
Query: 226 TEHRSLVDYMLA 237
L+ +L
Sbjct: 270 VHQLQLIMMVLG 281
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 19/201 (9%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIKQMKN---TKSKEFS---SELKILCKVHSNLIELIGY 71
+G+G++G V L K + G+ A+K +K E + +E ++L + + Y
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 215
Query: 72 A-AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ D L V EYA G L HL V + + + L+Y+H ++
Sbjct: 216 SFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-----YGAEIVSALDYLH--SEK 268
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
V+RD+K N++LD + KI DFGL K + A GT YLAPE + D
Sbjct: 269 NVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKTFCGTPEYLAPEVLEDND 325
Query: 191 VTTKSDVYAFGVVLMELITGQ 211
D + GVV+ E++ G+
Sbjct: 326 YGRAVDWWGLGVVMYEMMCGR 346
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 42/244 (17%)
Query: 20 IGQGSYGSVYLGKLRGKN----AAIKQMKNTKSKEFSS--------ELKILCKV-HSNLI 66
+G+G + +VY K R KN AIK++K E E+K+L ++ H N+I
Sbjct: 18 LGEGQFATVY--KARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 75
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI-ALDAAKGLEYIH 125
L+ ++ LV+++ + +K + + ++ L +GLEY+H
Sbjct: 76 GLLDAFGHKSNISLVFDFMETDLEV------IIKDNSLVLTPSHIKAYMLMTLQGLEYLH 129
Query: 126 QYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEY 185
Q+ + +HRD+K +N+LLD N K+ADFGL K SP A V T Y APE
Sbjct: 130 QH---WILHRDLKPNNLLLDENGVLKLADFGLAKSF-GSPN--RAYXHQVVTRWYRAPEL 183
Query: 186 VRDGCV-TTKSDVYAFGVVLMELITGQQALSRDAN-------------PGNNQYTEHRSL 231
+ + D++A G +L EL+ L D++ P Q+ + SL
Sbjct: 184 LFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSL 243
Query: 232 VDYM 235
DY+
Sbjct: 244 PDYV 247
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 96/231 (41%), Gaps = 29/231 (12%)
Query: 20 IGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKI-----------LCKVHSNLIEL 68
IG+GSY V L +L+ K I MK K + + + I H L+ L
Sbjct: 13 IGRGSYAKVLLVRLK-KTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 71
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT 128
LF V EY G L H+ + +K R A + + L Y+H+
Sbjct: 72 HSCFQTESRLFFVIEYVNGGDLMFHMQ----RQRKLPEEHARFYSA-EISLALNYLHERG 126
Query: 129 KPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRD 188
++RD+K N+LLDS K+ D+G+ K S GT Y+APE +R
Sbjct: 127 ---IIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSXFCGTPNYIAPEILRG 180
Query: 189 GCVTTKSDVYAFGVVLMELITGQQALSRDANPGN-NQYTEHRSLVDYMLAV 238
D +A GV++ E++ G+ + N +Q TE DY+ V
Sbjct: 181 EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE-----DYLFQV 226
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 86/171 (50%), Gaps = 13/171 (7%)
Query: 42 QMKNTKSKEFSSELKILCKVHSN-LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVK 100
++K + EL++L + +S ++ G + + E+ G+L L K
Sbjct: 52 EIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-----K 106
Query: 101 GKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKL 160
K + ++++ +GL Y+ + K +HRDVK SNIL++S K+ DFG+
Sbjct: 107 EAKRIPEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQ 164
Query: 161 LEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQ 211
L I + A+ VGT Y+APE ++ + +SD+++ G+ L+EL G+
Sbjct: 165 L-----IDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 111/253 (43%), Gaps = 32/253 (12%)
Query: 20 IGQGSYGSVYLGK-----LRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIELIGYAA 73
+G+G+YG VY G+ +R I + + S+ E+ + + H N+++ +G +
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 74 GGDSLFLVYEYAQNGALSDHLH--WPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPY 131
+ + E G+LS L W +K + QI +GL+Y+H
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL----EGLKYLHDNQ--- 128
Query: 132 YVHRDVKTSNILLDS-NFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
VHRD+K N+L+++ + KI+DFG K L I GT Y+APE + G
Sbjct: 129 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG---INPCTETFTGTLQYMAPEIIDKGP 185
Query: 191 --VTTKSDVYAFGVVLMELITGQQALSRDANPGN-----NQYTEHRSLVDYMLAVFNDTK 243
+D+++ G ++E+ TG+ P + H + + M A + K
Sbjct: 186 RGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSA---EAK 242
Query: 244 DFMAKLTECLDPN 256
F+ K C +P+
Sbjct: 243 AFILK---CFEPD 252
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 94/216 (43%), Gaps = 27/216 (12%)
Query: 18 LKIGQGSYGSVYLGKLRGKNAAI-------KQMKNTKSKEFSSELKILCKV-HSNLIELI 69
++IG+GS+ +VY G + +++ ++ + F E + L + H N++
Sbjct: 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFY 91
Query: 70 ----GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPL-AWTTRVQIALDAAKGLEYI 124
G + LV E +G L +L V K L +W ++ KGL+++
Sbjct: 92 DSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGLQFL 145
Query: 125 HQYTKPYYVHRDVKTSNILLDS-NFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
H T P +HRD+K NI + KI D GL L + A+ A ++GT + AP
Sbjct: 146 HTRTPPI-IHRDLKCDNIFITGPTGSVKIGDLGLATL-----KRASFAKAVIGTPEFXAP 199
Query: 184 EYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDAN 219
E + DVYAFG +E T + S N
Sbjct: 200 EXYEEK-YDESVDVYAFGXCXLEXATSEYPYSECQN 234
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGK--LRGKNAAIKQMKNTKSKE-----FSSELKILCKV- 61
ATS + +IG G+YG+VY + G A+K ++ +E E+ +L ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 62 ---HSNLIELIGYAAGGDS-----LFLVYEYAQNGALSDHLHWPSVKGKKP-LAWTTRVQ 112
H N++ L+ A + + LV+E+ L +L K P L T
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLD----KAPPPGLPAETIKD 116
Query: 113 IALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAAS 172
+ +GL+++H VHRD+K NIL+ S K+ADFGL ++ + A
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ----MALF 169
Query: 173 RIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELI 208
+V T Y APE + T D+++ G + E+
Sbjct: 170 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 98/239 (41%), Gaps = 29/239 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKI-----------LCK 60
+F IG+GSY V L +L+ K I MK K + + + I
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLK-KTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 67
Query: 61 VHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H L+ L LF V EY G L H+ + +K R A + +
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ----RQRKLPEEHARFYSA-EISLA 122
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L Y+H+ ++RD+K N+LLDS K+ D+G+ K S GT Y
Sbjct: 123 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSXFCGTPNY 176
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGN-NQYTEHRSLVDYMLAV 238
+APE +R D +A GV++ E++ G+ + N +Q TE DY+ V
Sbjct: 177 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE-----DYLFQV 230
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGK--LRGKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K G + A+K + K K KE +E +IL V+ + + +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EYA G + HL + +P A QI L EY+H
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 161
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+++D ++ DFGL K + + GT YLAPE +
Sbjct: 162 -LIYRDLKPENLMIDQQGYIQVTDFGLAK------RVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K + G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EYA G + HL + +P A QI L EY+H
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 162
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+++D K+ DFG K + + GT YLAPE +
Sbjct: 163 -LIYRDLKPENLMIDQQGYIKVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 215
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGK--LRGKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
IG GS+G V L K G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 161
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D K+ADFG K + + GT YLAPE +
Sbjct: 162 -LIYRDLKPENLLIDQQGYIKVADFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGK--LRGKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
IG GS+G V L K G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 161
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D K+ADFG K + + GT YLAPE +
Sbjct: 162 -LIYRDLKPENLLIDQQGYIKVADFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 94/214 (43%), Gaps = 23/214 (10%)
Query: 13 NFSTSLKIGQGSYGSVYLGKLR--GKNAAIK---QMKNTKSKEFS---SELKILCKVHSN 64
F +G GS+G V L K + G + A+K + K K K+ +E +I V+
Sbjct: 43 QFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFP 102
Query: 65 LIELIGYAAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEY 123
+ + ++ +S L++V EYA G + HL + +P A QI L EY
Sbjct: 103 FLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEY 157
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
+H ++RD+K N+L+D K+ADFG K + + GT YLAP
Sbjct: 158 LHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAK------RVKGRTWXLCGTPEYLAP 208
Query: 184 EYVRDGCVTTKSDVYAFGVVLMELITGQQALSRD 217
E + D +A GV++ E+ G D
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 37/214 (17%)
Query: 19 KIGQGSYGSV--YLGKLRGKNAAIKQMKNTKSKEFSSELKILCKVHSNLIELIGYAAGGD 76
+IG+G+YGSV + K G+ A+K++++T ++ +L L++L D
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQL---------LMDLDVVMRSSD 79
Query: 77 SLFLVYEYA---QNGALSDHLHWPSVKGKKPLAWTTRV-----------QIALDAAKGLE 122
++V Y + G + S K + V +I L K L
Sbjct: 80 CPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALN 139
Query: 123 YIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLA 182
++ + K +HRD+K SNILLD + K+ DFG+ L S A +R G Y+A
Sbjct: 140 HLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS----IAKTRDAGCRPYMA 193
Query: 183 PEYV-----RDGCVTTKSDVYAFGVVLMELITGQ 211
PE + R G +SDV++ G+ L EL TG+
Sbjct: 194 PERIDPSASRQG-YDVRSDVWSLGITLYELATGR 226
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 109/237 (45%), Gaps = 33/237 (13%)
Query: 12 SNFSTSLKIGQGSYGSVY------LGKLRG-KNAAIKQMKNTKSKEFSSELKILCKVHSN 64
++FS IG+G +G VY GK+ K K++K + + + +I+ + S
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 65 ----LIELIGYA-AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAK 119
I + YA D L + + G L HL V + + + A +
Sbjct: 248 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-----YAAEIIL 302
Query: 120 GLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG 179
GLE++H + V+RD+K +NILLD + +I+D GL + S + A+ VGT G
Sbjct: 303 GLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHAS---VGTHG 354
Query: 180 YLAPEYVRDGCV-TTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYM 235
Y+APE ++ G + +D ++ G +L +L+ G +P T+ + +D M
Sbjct: 355 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH-------SPFRQHKTKDKHEIDRM 404
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 127/268 (47%), Gaps = 23/268 (8%)
Query: 20 IGQ-GSYGSVYLGKLRGKNA-AIKQMKNTKSKE----FSSELKILCKV-HSNLIELIGYA 72
IG+ G +G VY + + + A ++ +TKS+E + E+ IL H N+++L+
Sbjct: 17 IGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 76
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
++L+++ E+ GA+ + ++ ++PL T QI + + L+ ++
Sbjct: 77 YYENNLWILIEFCAGGAVDAVM----LELERPL---TESQIQVVCKQTLDALNYLHDNKI 129
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV-----R 187
+HRD+K NIL + K+ADFG+ +++ +GT ++APE V +
Sbjct: 130 IHRDLKAGNILFTLDGDIKLADFGVSA--KNTRTXIQRRDSFIGTPYWMAPEVVMCETSK 187
Query: 188 DGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDFMA 247
D K+DV++ G+ L+E+ + + NP +S + + +F
Sbjct: 188 DRPYDYKADVWSLGITLIEMAEIEPP-HHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKD 246
Query: 248 KLTECLDPNL-TRYHKDSMLQMALLSKD 274
L +CL+ N+ R+ +LQ ++ D
Sbjct: 247 FLKKCLEKNVDARWTTSQLLQHPFVTVD 274
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 109/237 (45%), Gaps = 33/237 (13%)
Query: 12 SNFSTSLKIGQGSYGSVY------LGKLRG-KNAAIKQMKNTKSKEFSSELKILCKVHSN 64
++FS IG+G +G VY GK+ K K++K + + + +I+ + S
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 65 ----LIELIGYA-AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAK 119
I + YA D L + + G L HL V + + + A +
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-----YAAEIIL 303
Query: 120 GLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG 179
GLE++H + V+RD+K +NILLD + +I+D GL + S + A+ VGT G
Sbjct: 304 GLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHAS---VGTHG 355
Query: 180 YLAPEYVRDGCV-TTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYM 235
Y+APE ++ G + +D ++ G +L +L+ G +P T+ + +D M
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH-------SPFRQHKTKDKHEIDRM 405
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 120/268 (44%), Gaps = 27/268 (10%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQM--KNTKSKEFS--SELKILC 59
+ D F +G G++ V L K GK A+K + K K KE S +E+ +L
Sbjct: 16 QAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLR 75
Query: 60 KV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAA 118
K+ H N++ L + L+LV + G L D + +K +T ++ LDA
Sbjct: 76 KIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDA--STLIRQVLDA- 132
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILL---DSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
+ Y+H+ VHRD+K N+L D + I+DFGL K+ E ++ + A
Sbjct: 133 --VYYLHRMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKM-EGKGDVMSTA---C 183
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQY---TEHRSLV 232
GT GY+APE + + D ++ GV+ L+ G + + + E+
Sbjct: 184 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDS 243
Query: 233 DYMLAVFNDTKDFMAKLTECLDPNLTRY 260
Y + + KDF+ L E DPN RY
Sbjct: 244 PYWDDISDSAKDFIRNLME-KDPN-KRY 269
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 109/237 (45%), Gaps = 33/237 (13%)
Query: 12 SNFSTSLKIGQGSYGSVY------LGKLRG-KNAAIKQMKNTKSKEFSSELKILCKVHSN 64
++FS IG+G +G VY GK+ K K++K + + + +I+ + S
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 65 ----LIELIGYA-AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAK 119
I + YA D L + + G L HL V + + + A +
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-----YAAEIIL 303
Query: 120 GLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG 179
GLE++H + V+RD+K +NILLD + +I+D GL + S + A+ VGT G
Sbjct: 304 GLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHAS---VGTHG 355
Query: 180 YLAPEYVRDGCV-TTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYM 235
Y+APE ++ G + +D ++ G +L +L+ G +P T+ + +D M
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH-------SPFRQHKTKDKHEIDRM 405
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 109/237 (45%), Gaps = 33/237 (13%)
Query: 12 SNFSTSLKIGQGSYGSVY------LGKLRG-KNAAIKQMKNTKSKEFSSELKILCKVHSN 64
++FS IG+G +G VY GK+ K K++K + + + +I+ + S
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 65 ----LIELIGYA-AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAK 119
I + YA D L + + G L HL V + + + A +
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-----YAAEIIL 303
Query: 120 GLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG 179
GLE++H + V+RD+K +NILLD + +I+D GL + S + A+ VGT G
Sbjct: 304 GLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHAS---VGTHG 355
Query: 180 YLAPEYVRDGCV-TTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYM 235
Y+APE ++ G + +D ++ G +L +L+ G +P T+ + +D M
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH-------SPFRQHKTKDKHEIDRM 405
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGK--LRGKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EYA G + HL + +P A QI L EY+H
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIG-RFXEPHARFYAAQIVLT----FEYLHSLD-- 162
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+++D K+ DFG K + + GT YLAPE +
Sbjct: 163 -LIYRDLKPENLMIDQQGYIKVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 215
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 32/218 (14%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLG---KLRGKNAAIKQMKNTKSKEFSS-----ELKILCKV 61
A + +IG+G+YG V+ K G+ A+K+++ +E E+ +L +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 62 ----HSNLIELIGYAAGGDS-----LFLVYEYAQNGALS--DHLHWPSVKGKKPLAWTTR 110
H N++ L + L LV+E+ + D + P V + T
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTE------TI 122
Query: 111 VQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAA 170
+ +GL+++H + VHRD+K NIL+ S+ + K+ADFGL ++ A
Sbjct: 123 KDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIY----SFQMA 175
Query: 171 ASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELI 208
+ +V T Y APE + T D+++ G + E+
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGK--LRGKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EYA G + HL + +P A QI L EY+H
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 162
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+++D K+ DFG K + + GT YLAPE +
Sbjct: 163 -LIYRDLKPENLMIDQQGYIKVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 215
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGK--LRGKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EYA G + HL + +P A QI L EY+H
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 162
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+++D K+ DFG K + + GT YLAPE +
Sbjct: 163 -LIYRDLKPENLMIDQQGYIKVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 215
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 18/199 (9%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQM-KNTKSKEFS---SELKILCKV-HSNLIELIGYA 72
IG G + V L L G+ AIK M KNT + +E++ L + H ++ +L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
+ +F+V EY G L D++ + + TRV + + Y+H Y
Sbjct: 78 ETANKIFMVLEYCPGGELFDYI----ISQDRLSEEETRV-VFRQIVSAVAYVHSQG---Y 129
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVR-DGCV 191
HRD+K N+L D + K+ DFGL + + + G+ Y APE ++ +
Sbjct: 130 AHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTC--CGSLAYAAPELIQGKSYL 187
Query: 192 TTKSDVYAFGVVLMELITG 210
+++DV++ G++L L+ G
Sbjct: 188 GSEADVWSMGILLYVLMCG 206
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 26/220 (11%)
Query: 13 NFSTSLKIGQGSYGSVYLGKLRGKNA-----AIKQMK-----NTKSKEFSSELKILCKV- 61
F+ +G+G +GSV +L+ ++ A+K +K ++ +EF E + +
Sbjct: 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFD 83
Query: 62 HSNLIELIGY-----AAGGDSL-FLVYEYAQNGALSDHLHWPSVKGKKP--LAWTTRVQI 113
H ++ +L+G A G + ++ + ++G L L S G+ P L T V+
Sbjct: 84 HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFL-LASRIGENPFNLPLQTLVRF 142
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLV-KLLEHSPEIAAAAS 172
+D A G+EY+ ++HRD+ N +L + +ADFGL K+ AS
Sbjct: 143 MVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCAS 199
Query: 173 RIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQ 212
++ +LA E + D T SDV+AFGV + E++T Q
Sbjct: 200 KL--PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQ 237
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 96/231 (41%), Gaps = 29/231 (12%)
Query: 20 IGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKI-----------LCKVHSNLIEL 68
IG+GSY V L +L+ K I M+ K + + + I H L+ L
Sbjct: 60 IGRGSYAKVLLVRLK-KTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 118
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT 128
LF V EY G L H+ K + A +I+L L Y+H+
Sbjct: 119 HSCFQTESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISL----ALNYLHERG 173
Query: 129 KPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRD 188
++RD+K N+LLDS K+ D+G+ K S GT Y+APE +R
Sbjct: 174 ---IIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSTFCGTPNYIAPEILRG 227
Query: 189 GCVTTKSDVYAFGVVLMELITGQQALSRDANPGN-NQYTEHRSLVDYMLAV 238
D +A GV++ E++ G+ + N +Q TE DY+ V
Sbjct: 228 EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE-----DYLFQV 273
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K + G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 182
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + A + GT YLAPE +
Sbjct: 183 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGATWTLCGTPEYLAPEIILSKG 235
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPPFFAD 262
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K + G + A+K + K K K+ +E +IL V+ + + Y
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 161
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 162 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K + G + A+K + K K K+ +E +IL V+ + + Y
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 161
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 162 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K + G + A+K + K K K+ +E +IL V+ + + Y
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 161
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 162 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 115/257 (44%), Gaps = 31/257 (12%)
Query: 10 ATSNFSTSLK---IGQGSYGSVYLG-------KLRGKNAAIKQMKNTKSKEFSSELKILC 59
A ++F T K +G G +G V+ KL K + MK+ +E +E+ ++
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKD--KEEVKNEISVMN 141
Query: 60 KV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAA 118
++ H+NLI+L + + LV EY G L D + + L +
Sbjct: 142 QLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRI----IDESYNLTELDTILFMKQIC 197
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILL---DSNFRAKIADFGLVKLLEHSPEIAAAASRIV 175
+G+ ++HQ Y +H D+K NIL D+ + KI DFGL + + ++
Sbjct: 198 EGIRHMHQM---YILHLDLKPENILCVNRDAK-QIKIIDFGLARRYKPREKLKVN----F 249
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQAL--SRDANPGNNQYTEHRSLVD 233
GT +LAPE V V+ +D+++ GV+ L++G DA NN L D
Sbjct: 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLED 309
Query: 234 YMLA-VFNDTKDFMAKL 249
+ + K+F++KL
Sbjct: 310 EEFQDISEEAKEFISKL 326
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 32/218 (14%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLG---KLRGKNAAIKQMKNTKSKEFSS-----ELKILCKV 61
A + +IG+G+YG V+ K G+ A+K+++ +E E+ +L +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 62 ----HSNLIELIGYAAGGDS-----LFLVYEYAQNGALS--DHLHWPSVKGKKPLAWTTR 110
H N++ L + L LV+E+ + D + P V + T
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTE------TI 122
Query: 111 VQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAA 170
+ +GL+++H + VHRD+K NIL+ S+ + K+ADFGL ++ A
Sbjct: 123 KDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIY----SFQMA 175
Query: 171 ASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELI 208
+ +V T Y APE + T D+++ G + E+
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 20/201 (9%)
Query: 20 IGQGSYGSVYLGKL--RGKNA----AIKQMKNTKS----KEFSSELKILCKVHSNLIELI 69
+G G++G+VY G G+N AIK ++ S KE E ++ V S + +
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTK 129
++ LV + G L DH+ + + L + + AKG+ Y+
Sbjct: 85 LGICLTSTVQLVTQLMPYGCLLDHVR----ENRGRLGSQDLLNWCMQIAKGMSYLEDVR- 139
Query: 130 PYYVHRDVKTSNILLDSNFRAKIADFGLVKLLE-HSPEIAAAASRIVGTFGYLAPEYVRD 188
VHRD+ N+L+ S KI DFGL +LL+ E A ++ ++A E +
Sbjct: 140 --LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKV--PIKWMALESILR 195
Query: 189 GCVTTKSDVYAFGVVLMELIT 209
T +SDV+++GV + EL+T
Sbjct: 196 RRFTHQSDVWSYGVTVWELMT 216
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 32/218 (14%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLG---KLRGKNAAIKQMKNTKSKEFSS-----ELKILCKV 61
A + +IG+G+YG V+ K G+ A+K+++ +E E+ +L +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 62 ----HSNLIELIGYAAGGDS-----LFLVYEYAQNGALS--DHLHWPSVKGKKPLAWTTR 110
H N++ L + L LV+E+ + D + P V + T
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTE------TI 122
Query: 111 VQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAA 170
+ +GL+++H + VHRD+K NIL+ S+ + K+ADFGL ++ A
Sbjct: 123 KDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIY----SFQMA 175
Query: 171 ASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELI 208
+ +V T Y APE + T D+++ G + E+
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 108/225 (48%), Gaps = 38/225 (16%)
Query: 9 DATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTKSKE-FS----SELKILCKV 61
D S + KIGQG++G V+ + R G+ A+K++ KE F E+KIL +
Sbjct: 14 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 73
Query: 62 -HSNLIELI--------GYAAGGDSLFLVYEYAQN---GALSDHLHWPSVKGKKPLAWTT 109
H N++ LI Y S++LV+++ ++ G LS+ V K L+
Sbjct: 74 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN------VLVKFTLSEIK 127
Query: 110 RVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKL--LEHSPEI 167
RV L GL YIH+ +HRD+K +N+L+ + K+ADFGL + L + +
Sbjct: 128 RVMQML--LNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 182
Query: 168 AAAASRIVGTFGYLAPEYV---RDGCVTTKSDVYAFGVVLMELIT 209
+R+V T Y PE + RD D++ G ++ E+ T
Sbjct: 183 NRYXNRVV-TLWYRPPELLLGERD--YGPPIDLWGAGCIMAEMWT 224
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGK--LRGKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EYA G + HL + +P A QI L EY+H
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIG-RFXEPHARFYAAQIVLT----FEYLHSLD-- 161
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+++D K+ DFG K + + GT YLAPE +
Sbjct: 162 -LIYRDLKPENLMIDQQGYIKVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGK--LRGKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EYA G + HL + +P A QI L EY+H
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 161
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+++D K+ DFG K + + GT YLAPE +
Sbjct: 162 -LIYRDLKPENLMIDQQGYIKVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 32/219 (14%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGK--LRGKNAAIKQMKNTKSKEFSSELKI--------LC 59
ATS + +IG G+YG+VY + G A+K ++ L I L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 60 KV----HSNLIELIGYAAGGDS-----LFLVYEYAQNGALSDHLHWPSVKGKKP-LAWTT 109
++ H N++ L+ A + + LV+E+ L +L K P L T
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLD----KAPPPGLPAET 121
Query: 110 RVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAA 169
+ +GL+++H VHRD+K NIL+ S K+ADFGL ++ +
Sbjct: 122 IKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ----M 174
Query: 170 AASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELI 208
A + +V T Y APE + T D+++ G + E+
Sbjct: 175 ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 108/225 (48%), Gaps = 38/225 (16%)
Query: 9 DATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTKSKE-FS----SELKILCKV 61
D S + KIGQG++G V+ + R G+ A+K++ KE F E+KIL +
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 74
Query: 62 -HSNLIELI--------GYAAGGDSLFLVYEYAQN---GALSDHLHWPSVKGKKPLAWTT 109
H N++ LI Y S++LV+++ ++ G LS+ V K L+
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN------VLVKFTLSEIK 128
Query: 110 RVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKL--LEHSPEI 167
RV L GL YIH+ +HRD+K +N+L+ + K+ADFGL + L + +
Sbjct: 129 RVMQML--LNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 183
Query: 168 AAAASRIVGTFGYLAPEYV---RDGCVTTKSDVYAFGVVLMELIT 209
+R+V T Y PE + RD D++ G ++ E+ T
Sbjct: 184 NRYXNRVV-TLWYRPPELLLGERD--YGPPIDLWGAGCIMAEMWT 225
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 99/202 (49%), Gaps = 21/202 (10%)
Query: 19 KIGQGSYGSVYLGK-LRGKNAAIKQMKNTKSKEFSS-----ELKILCKVH-SNLIELIGY 71
K+G+G+YG VY K +G+ A+K+++ E E+ +L ++H N++ LI
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 72 AAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIAL-DAAKGLEYIHQYTKP 130
L LV+E+ + + K ++++I L +G+ + HQ+
Sbjct: 88 IHSERCLTLVFEFMEKDLKK------VLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR-- 139
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG- 189
+HRD+K N+L++S+ K+ADFGL + + + V T Y AP+ +
Sbjct: 140 -ILHRDLKPQNLLINSDGALKLADFGLARAFGIP---VRSYTHEVVTLWYRAPDVLMGSK 195
Query: 190 CVTTKSDVYAFGVVLMELITGQ 211
+T D+++ G + E+ITG+
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGK 217
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 20/199 (10%)
Query: 20 IGQGSYGSVYLGKLRGKN-----AAIKQMKNTKS----KEFSSELKILCKV-HSNLIELI 69
IG+G +G V+ G AIK KN S ++F E + + H ++++LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTK 129
G + ++++ E G L L K L + + A + L Y+
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQ----VRKFSLDLASLILYAYQLSTALAYLESKR- 131
Query: 130 PYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG 189
+VHRD+ N+L+ + K+ DFGL + +E S A+ ++ ++APE +
Sbjct: 132 --FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFR 187
Query: 190 CVTTKSDVYAFGVVLMELI 208
T+ SDV+ FGV + E++
Sbjct: 188 RFTSASDVWMFGVCMWEIL 206
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 99/202 (49%), Gaps = 21/202 (10%)
Query: 19 KIGQGSYGSVYLGK-LRGKNAAIKQMKNTKSKEFSS-----ELKILCKVH-SNLIELIGY 71
K+G+G+YG VY K +G+ A+K+++ E E+ +L ++H N++ LI
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 72 AAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIAL-DAAKGLEYIHQYTKP 130
L LV+E+ + + K ++++I L +G+ + HQ+
Sbjct: 88 IHSERCLTLVFEFMEKDLKK------VLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR-- 139
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG- 189
+HRD+K N+L++S+ K+ADFGL + + + V T Y AP+ +
Sbjct: 140 -ILHRDLKPQNLLINSDGALKLADFGLARAFGIP---VRSYTHEVVTLWYRAPDVLMGSK 195
Query: 190 CVTTKSDVYAFGVVLMELITGQ 211
+T D+++ G + E+ITG+
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGK 217
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K + G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFXEPHARFYAAQIVLT----FEYLHSLD-- 154
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 155 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 207
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 208 YNKAVDWWALGVLIYEMAAGYPPFFAD 234
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 108/225 (48%), Gaps = 38/225 (16%)
Query: 9 DATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTKSKE-FS----SELKILCKV 61
D S + KIGQG++G V+ + R G+ A+K++ KE F E+KIL +
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 74
Query: 62 -HSNLIELI--------GYAAGGDSLFLVYEYAQN---GALSDHLHWPSVKGKKPLAWTT 109
H N++ LI Y S++LV+++ ++ G LS+ V K L+
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN------VLVKFTLSEIK 128
Query: 110 RVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKL--LEHSPEI 167
RV L GL YIH+ +HRD+K +N+L+ + K+ADFGL + L + +
Sbjct: 129 RVMQML--LNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 183
Query: 168 AAAASRIVGTFGYLAPEYV---RDGCVTTKSDVYAFGVVLMELIT 209
+R+V T Y PE + RD D++ G ++ E+ T
Sbjct: 184 NRYXNRVV-TLWYRPPELLLGERD--YGPPIDLWGAGCIMAEMWT 225
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 108/225 (48%), Gaps = 38/225 (16%)
Query: 9 DATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTKSKE-FS----SELKILCKV 61
D S + KIGQG++G V+ + R G+ A+K++ KE F E+KIL +
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 74
Query: 62 -HSNLIELI--------GYAAGGDSLFLVYEYAQN---GALSDHLHWPSVKGKKPLAWTT 109
H N++ LI Y S++LV+++ ++ G LS+ V K L+
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSN------VLVKFTLSEIK 128
Query: 110 RVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKL--LEHSPEI 167
RV L GL YIH+ +HRD+K +N+L+ + K+ADFGL + L + +
Sbjct: 129 RVMQML--LNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP 183
Query: 168 AAAASRIVGTFGYLAPEYV---RDGCVTTKSDVYAFGVVLMELIT 209
+R+V T Y PE + RD D++ G ++ E+ T
Sbjct: 184 NRYXNRVV-TLWYRPPELLLGERD--YGPPIDLWGAGCIMAEMWT 225
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 118/275 (42%), Gaps = 30/275 (10%)
Query: 20 IGQGSYGSVYLG------KLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIELIGYA 72
+G G++ V L KL K+ K +E+ +L K+ H N++ L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI-ALDAAKGLEYIHQYTKPY 131
G L+L+ + G L D + KG +R+ LDA K Y+H
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRI---VEKGFYTERDASRLIFQVLDAVK---YLHDLG--- 136
Query: 132 YVHRDVKTSNIL---LDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRD 188
VHRD+K N+L LD + + I+DFGL K+ + ++ A GT GY+APE +
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC----GTPGYVAPEVLAQ 192
Query: 189 GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQY---TEHRSLVDYMLAVFNDTKDF 245
+ D ++ GV+ L+ G + + + E+ Y + + KDF
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDF 252
Query: 246 MAKLTECLDPNLTRYHKDSMLQMALLSKD-CVDEN 279
+ L E DP R+ + LQ ++ D +D+N
Sbjct: 253 IRHLME-KDPE-KRFTCEQALQHPWIAGDTALDKN 285
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K + G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 154
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 155 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 207
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 208 YNKAVDWWALGVLIYEMAAGYPPFFAD 234
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 118/275 (42%), Gaps = 30/275 (10%)
Query: 20 IGQGSYGSVYLG------KLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIELIGYA 72
+G G++ V L KL K+ K +E+ +L K+ H N++ L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI-ALDAAKGLEYIHQYTKPY 131
G L+L+ + G L D + KG +R+ LDA K Y+H
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRI---VEKGFYTERDASRLIFQVLDAVK---YLHDLG--- 136
Query: 132 YVHRDVKTSNIL---LDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRD 188
VHRD+K N+L LD + + I+DFGL K+ + ++ A GT GY+APE +
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC----GTPGYVAPEVLAQ 192
Query: 189 GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQY---TEHRSLVDYMLAVFNDTKDF 245
+ D ++ GV+ L+ G + + + E+ Y + + KDF
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDF 252
Query: 246 MAKLTECLDPNLTRYHKDSMLQMALLSKD-CVDEN 279
+ L E DP R+ + LQ ++ D +D+N
Sbjct: 253 IRHLME-KDPE-KRFTCEQALQHPWIAGDTALDKN 285
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 104/223 (46%), Gaps = 32/223 (14%)
Query: 3 SYNEVR---DATSNFSTSLKIGQGSYGSVYLGKLRGKNA-AIKQMKNTKSKE----FSSE 54
Y VR D + ++G G++G VY K + A A ++ TKS+E + E
Sbjct: 7 EYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVE 66
Query: 55 LKILCKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
++IL H +++L+G L+++ E+ GA+ D + +G T QI
Sbjct: 67 IEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRG------LTEPQI 119
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGL----VKLLEHSPEIAA 169
+ + LE ++ +HRD+K N+L+ ++ADFG+ +K L+
Sbjct: 120 QVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR----- 174
Query: 170 AASRIVGTFGYLAPEYV-----RDGCVTTKSDVYAFGVVLMEL 207
+GT ++APE V +D K+D+++ G+ L+E+
Sbjct: 175 --DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 118/275 (42%), Gaps = 30/275 (10%)
Query: 20 IGQGSYGSVYLG------KLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIELIGYA 72
+G G++ V L KL K+ K +E+ +L K+ H N++ L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI-ALDAAKGLEYIHQYTKPY 131
G L+L+ + G L D + KG +R+ LDA K Y+H
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRI---VEKGFYTERDASRLIFQVLDAVK---YLHDLG--- 136
Query: 132 YVHRDVKTSNIL---LDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRD 188
VHRD+K N+L LD + + I+DFGL K+ + ++ A GT GY+APE +
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC----GTPGYVAPEVLAQ 192
Query: 189 GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQY---TEHRSLVDYMLAVFNDTKDF 245
+ D ++ GV+ L+ G + + + E+ Y + + KDF
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDF 252
Query: 246 MAKLTECLDPNLTRYHKDSMLQMALLSKD-CVDEN 279
+ L E DP R+ + LQ ++ D +D+N
Sbjct: 253 IRHLME-KDPE-KRFTCEQALQHPWIAGDTALDKN 285
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN------AAIKQMKNTKS----KEFSSELKILCKV 61
+ F +G G++G+VY G + AIK+++ S KE E ++ V
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAA 118
+ ++ L+G ++ L+ + G L D++ H ++ + L W ++ A
Sbjct: 76 DNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 128
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL-EHSPEIAAAASRIVGT 177
KG+ Y+ VHRD+ N+L+ + KI DFGL KLL E A ++
Sbjct: 129 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 183
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++A E + T +SDV+++GV + EL+T
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K + G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 162
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 163 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 215
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN------AAIKQMKNTKS----KEFSSELKILCKV 61
+ F +G G++G+VY G + AIK+++ S KE E ++ V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAA 118
+ ++ L+G ++ L+ + G L D++ H ++ + L W ++ A
Sbjct: 75 DNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 127
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL-EHSPEIAAAASRIVGT 177
KG+ Y+ VHRD+ N+L+ + KI DFGL KLL E A ++
Sbjct: 128 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 182
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++A E + T +SDV+++GV + EL+T
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K + G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 162
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 163 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 215
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K + G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 162
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 163 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 215
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN------AAIKQMKNTKS----KEFSSELKILCKV 61
+ F +G G++G+VY G + AIK+++ S KE E ++ V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAA 118
+ ++ L+G ++ L+ + G L D++ H ++ + L W ++ A
Sbjct: 78 DNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 130
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL-EHSPEIAAAASRIVGT 177
KG+ Y+ VHRD+ N+L+ + KI DFGL KLL E A ++
Sbjct: 131 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 185
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++A E + T +SDV+++GV + EL+T
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 29/215 (13%)
Query: 16 TSLKIGQGSYGSVY--LGKLRGKNAAIK----QMKNTKSKEFSSELKIL--CKVHSNLIE 67
TS +G+G+Y V + GK A+K Q +++S+ F E++ L C+ + N++E
Sbjct: 17 TSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFR-EVETLYQCQGNKNILE 75
Query: 68 LIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQY 127
LI + +LV+E Q G++ H ++ +K ++ D A L+++H
Sbjct: 76 LIEFFEDDTRFYLVFEKLQGGSILAH-----IQKQKHFNEREASRVVRDVAAALDFLH-- 128
Query: 128 TKPYYVHRDVKTSNILLDSNFR---AKIADFGLVKLLE----HSPEIAAAASRIVGTFGY 180
TK HRD+K NIL +S + KI DF L ++ +P + G+ Y
Sbjct: 129 TKG-IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEY 187
Query: 181 LAPEYV-----RDGCVTTKSDVYAFGVVLMELITG 210
+APE V + + D+++ GVVL +++G
Sbjct: 188 MAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN------AAIKQMKNTKS----KEFSSELKILCKV 61
+ F +G G++G+VY G + AIK+++ S KE E ++ V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAA 118
+ ++ L+G ++ L+ + G L D++ H ++ + L W ++ A
Sbjct: 77 DNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 129
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL-EHSPEIAAAASRIVGT 177
KG+ Y+ VHRD+ N+L+ + KI DFGL KLL E A ++
Sbjct: 130 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 184
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++A E + T +SDV+++GV + EL+T
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN------AAIKQMKNTKS----KEFSSELKILCKV 61
+ F +G G++G+VY G + AIK+++ S KE E ++ V
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAA 118
+ ++ L+G ++ L+ + G L D++ H ++ + L W ++ A
Sbjct: 79 DNPHVCRLLGICLT-STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 131
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL-EHSPEIAAAASRIVGT 177
KG+ Y+ VHRD+ N+L+ + KI DFGL KLL E A ++
Sbjct: 132 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 186
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++A E + T +SDV+++GV + EL+T
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 22/206 (10%)
Query: 16 TSLKIGQGSYGSVY--LGKLRGKNAAIKQMKNTKS-----KEFSSELKIL--CKVHSNLI 66
TS ++G+G + V + K G+ A K +K + E E+ +L K +I
Sbjct: 33 TSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVI 92
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ 126
L + L+ EYA G + L P + + ++ +++ +G+ Y+HQ
Sbjct: 93 NLHEVYENTSEIILILEYAAGGEIFS-LCLPELA--EMVSENDVIRLIKQILEGVYYLHQ 149
Query: 127 YTKPYYVHRDVKTSNILLDSNFR---AKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
VH D+K NILL S + KI DFG+ + + H+ E+ I+GT YLAP
Sbjct: 150 NN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACEL----REIMGTPEYLAP 202
Query: 184 EYVRDGCVTTKSDVYAFGVVLMELIT 209
E + +TT +D++ G++ L+T
Sbjct: 203 EILNYDPITTATDMWNIGIIAYMLLT 228
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN------AAIKQMKNTKS----KEFSSELKILCKV 61
+ F +G G++G+VY G + AIK+++ S KE E ++ V
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAA 118
+ ++ L+G ++ L+ + G L D++ H ++ + L W ++ A
Sbjct: 85 DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 137
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL-EHSPEIAAAASRIVGT 177
KG+ Y+ VHRD+ N+L+ + KI DFGL KLL E A ++
Sbjct: 138 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 192
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++A E + T +SDV+++GV + EL+T
Sbjct: 193 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN------AAIKQMKNTKS----KEFSSELKILCKV 61
+ F +G G++G+VY G + AIK+++ S KE E ++ V
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAA 118
+ ++ L+G ++ L+ + G L D++ H ++ + L W ++ A
Sbjct: 76 DNPHVCRLLGICLTS-TVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------A 128
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL-EHSPEIAAAASRIVGT 177
KG+ Y+ VHRD+ N+L+ + KI DFGL KLL E A ++
Sbjct: 129 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 183
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++A E + T +SDV+++GV + EL+T
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 84/190 (44%), Gaps = 32/190 (16%)
Query: 54 ELKILCKV--HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRV 111
E+ IL KV H N+I+L FLV++ + G L D+L +K T ++
Sbjct: 60 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE---TRKI 116
Query: 112 QIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAA 171
AL LE I K VHRD+K NILLD + K+ DFG L+ ++
Sbjct: 117 MRAL-----LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL---- 167
Query: 172 SRIVGTFGYLAPEYVRDGCVTTKS--------DVYAFGVVLMELITG--------QQALS 215
+ GT YLAPE + C + D+++ GV++ L+ G Q +
Sbjct: 168 REVCGTPSYLAPEIIE--CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML 225
Query: 216 RDANPGNNQY 225
R GN Q+
Sbjct: 226 RMIMSGNYQF 235
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 85/190 (44%), Gaps = 32/190 (16%)
Query: 54 ELKILCKV--HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRV 111
E+ IL KV H N+I+L FLV++ + G L D+L +K T ++
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE---TRKI 129
Query: 112 QIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAA 171
AL LE I K VHRD+K NILLD + K+ DFG L+ ++ +
Sbjct: 130 MRAL-----LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS-- 182
Query: 172 SRIVGTFGYLAPEYVRDGCVTTKS--------DVYAFGVVLMELITG--------QQALS 215
+ GT YLAPE + C + D+++ GV++ L+ G Q +
Sbjct: 183 --VCGTPSYLAPEIIE--CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML 238
Query: 216 RDANPGNNQY 225
R GN Q+
Sbjct: 239 RMIMSGNYQF 248
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K + G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 95
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 96 SFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 148
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 149 -LIYRDLKPENLLIDEQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 201
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 202 YNKAVDWWALGVLIYEMAAGYPPFFAD 228
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K + G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 103
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 104 SFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFXEPHARFYAAQIVLT----FEYLHSLD-- 156
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 157 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 209
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 210 YNKAVDWWALGVLIYEMAAGYPPFFAD 236
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN------AAIKQMKNTKS----KEFSSELKILCKV 61
+ F +G G++G+VY G + AIK+++ S KE E ++ V
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAA 118
+ ++ L+G ++ L+ + G L D++ H ++ + L W ++ A
Sbjct: 69 DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 121
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL-EHSPEIAAAASRIVGT 177
KG+ Y+ VHRD+ N+L+ + KI DFGL KLL E A ++
Sbjct: 122 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 176
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++A E + T +SDV+++GV + EL+T
Sbjct: 177 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K + G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 161
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 162 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLAGTPEYLAPEIILSKG 214
Query: 191 VTTKSDVYAFGVVLMELITG 210
D +A GV++ E+ G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 35/214 (16%)
Query: 19 KIGQGSYGSVYLGKLRGKNA--AIKQMKNTK----------------SKEFSSELKILCK 60
K+G G+YG V L K + ++ AIK +K ++ +E +E+ +L
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 61 V-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAK 119
+ H N+I+L +LV E+ + G L + + + I
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGEL-----FEQIINRHKFDECDAANIMKQILS 157
Query: 120 GLEYIHQYTKPYYVHRDVKTSNILLDSN---FRAKIADFGLVKLLEHSPEIAAAASRIVG 176
G+ Y+H++ VHRD+K NILL++ KI DFGL ++ +G
Sbjct: 158 GICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR----LG 210
Query: 177 TFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITG 210
T Y+APE ++ K DV++ GV++ L+ G
Sbjct: 211 TAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCG 243
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K + G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFXEPHARFYAAQIVLT----FEYLHSLD-- 161
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 162 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K + G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 161
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 162 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K + G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 161
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 162 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN------AAIKQMKNTKS----KEFSSELKILCKV 61
+ F +G G++G+VY G + AIK+++ S KE E ++ V
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAA 118
+ ++ L+G ++ L+ + G L D++ H ++ + L W ++ A
Sbjct: 82 DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 134
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL-EHSPEIAAAASRIVGT 177
KG+ Y+ VHRD+ N+L+ + KI DFGL KLL E A ++
Sbjct: 135 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 189
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++A E + T +SDV+++GV + EL+T
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN------AAIKQMKNTKS----KEFSSELKILCKV 61
+ F +G G++G+VY G + AIK+++ S KE E ++ V
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAA 118
+ ++ L+G ++ L+ + G L D++ H ++ + L W ++ A
Sbjct: 81 DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 133
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL-EHSPEIAAAASRIVGT 177
KG+ Y+ VHRD+ N+L+ + KI DFGL KLL E A ++
Sbjct: 134 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 188
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++A E + T +SDV+++GV + EL+T
Sbjct: 189 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K + G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 130 SFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 182
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 183 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 235
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPPFFAD 262
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K + G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFXEPHARFYAAQIVLT----FEYLHSLD-- 161
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 162 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K + G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 161
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 162 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN------AAIKQMKNTKS----KEFSSELKILCKV 61
+ F +G G++G+VY G + AIK+++ S KE E ++ V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAA 118
+ ++ L+G ++ L+ + G L D++ H ++ + L W ++ A
Sbjct: 75 DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 127
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL-EHSPEIAAAASRIVGT 177
KG+ Y+ VHRD+ N+L+ + KI DFGL KLL E A ++
Sbjct: 128 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 182
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++A E + T +SDV+++GV + EL+T
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K + G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 110 SFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 162
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 163 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 215
Query: 191 VTTKSDVYAFGVVLMELITG 210
D +A GV++ E+ G
Sbjct: 216 YNKAVDWWALGVLIYEMAAG 235
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 118/275 (42%), Gaps = 30/275 (10%)
Query: 20 IGQGSYGSVYLG------KLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIELIGYA 72
+G G++ V L KL K+ K +E+ +L K+ H N++ L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI-ALDAAKGLEYIHQYTKPY 131
G L+L+ + G L D + KG +R+ LDA K Y+H
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRI---VEKGFYTERDASRLIFQVLDAVK---YLHDLG--- 136
Query: 132 YVHRDVKTSNIL---LDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRD 188
VHRD+K N+L LD + + I+DFGL K+ + ++ A GT GY+APE +
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC----GTPGYVAPEVLAQ 192
Query: 189 GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQY---TEHRSLVDYMLAVFNDTKDF 245
+ D ++ GV+ L+ G + + + E+ Y + + KDF
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDF 252
Query: 246 MAKLTECLDPNLTRYHKDSMLQMALLSKD-CVDEN 279
+ L E DP R+ + LQ ++ D +D+N
Sbjct: 253 IRHLME-KDPE-KRFTCEQALQHPWIAGDTALDKN 285
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN------AAIKQMKNTKS----KEFSSELKILCKV 61
+ F +G G++G+VY G + AIK+++ S KE E ++ V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAA 118
+ ++ L+G ++ L+ + G L D++ H ++ + L W ++ A
Sbjct: 78 DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 130
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL-EHSPEIAAAASRIVGT 177
KG+ Y+ VHRD+ N+L+ + KI DFGL KLL E A ++
Sbjct: 131 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 185
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++A E + T +SDV+++GV + EL+T
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN------AAIKQMKNTKS----KEFSSELKILCKV 61
+ F +G G++G+VY G + AIK+++ S KE E ++ V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAA 118
+ ++ L+G ++ L+ + G L D++ H ++ + L W ++ A
Sbjct: 75 DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 127
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL-EHSPEIAAAASRIVGT 177
KG+ Y+ VHRD+ N+L+ + KI DFGL KLL E A ++
Sbjct: 128 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 182
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++A E + T +SDV+++GV + EL+T
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN------AAIKQMKNTKS----KEFSSELKILCKV 61
+ F +G G++G+VY G + AIK+++ S KE E ++ V
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAA 118
+ ++ L+G ++ L+ + G L D++ H ++ + L W ++ A
Sbjct: 100 DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 152
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL-EHSPEIAAAASRIVGT 177
KG+ Y+ VHRD+ N+L+ + KI DFGL KLL E A ++
Sbjct: 153 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 207
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++A E + T +SDV+++GV + EL+T
Sbjct: 208 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 99/204 (48%), Gaps = 29/204 (14%)
Query: 19 KIGQGSYGSVYLGKLRGKNA-AIKQMKNTKSKE----FSSELKILCKV-HSNLIELIGYA 72
++G G++G VY K + A A ++ TKS+E + E++IL H +++L+G
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
L+++ E+ GA+ D + +G T QI + + LE ++
Sbjct: 78 YHDGKLWIMIEFCPGGAV-DAIMLELDRG------LTEPQIQVVCRQMLEALNFLHSKRI 130
Query: 133 VHRDVKTSNILLDSNFRAKIADFGL----VKLLEHSPEIAAAASRIVGTFGYLAPEYV-- 186
+HRD+K N+L+ ++ADFG+ +K L+ +GT ++APE V
Sbjct: 131 IHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR-------DSFIGTPYWMAPEVVMC 183
Query: 187 ---RDGCVTTKSDVYAFGVVLMEL 207
+D K+D+++ G+ L+E+
Sbjct: 184 ETMKDTPYDYKADIWSLGITLIEM 207
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN------AAIKQMKNTKS----KEFSSELKILCKV 61
+ F +G G++G+VY G + AIK+++ S KE E ++ V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAA 118
+ ++ L+G ++ L+ + G L D++ H ++ + L W ++ A
Sbjct: 78 DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 130
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL-EHSPEIAAAASRIVGT 177
KG+ Y+ VHRD+ N+L+ + KI DFGL KLL E A ++
Sbjct: 131 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 185
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++A E + T +SDV+++GV + EL+T
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K + G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFXEPHARFYAAQIVLT----FEYLHSLD-- 161
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 162 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K + G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 161
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 162 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 84/201 (41%), Gaps = 22/201 (10%)
Query: 20 IGQGSYGSVYLGKLRGKNAAI------KQMKNTKSKEFSSELKILCKVHSNLIELIGYAA 73
+G+GS+ + N A K+M+ KE ++ LK LC+ H N+++L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITA-LK-LCEGHPNIVKLHEVFH 76
Query: 74 GGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYV 133
FLV E G L + +K KK + T I + ++H V
Sbjct: 77 DQLHTFLVMELLNGGEL-----FERIKKKKHFSETEASYIMRKLVSAVSHMHDVG---VV 128
Query: 134 HRDVKTSNILL---DSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
HRD+K N+L + N KI DFG +L P T Y APE +
Sbjct: 129 HRDLKPENLLFTDENDNLEIKIIDFGFARL---KPPDNQPLKTPCFTLHYAAPELLNQNG 185
Query: 191 VTTKSDVYAFGVVLMELITGQ 211
D+++ GV+L +++GQ
Sbjct: 186 YDESCDLWSLGVILYTMLSGQ 206
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPS-VKGKKPLAWTTRVQIALDAAKGLEY 123
++ +IG +S LV E A+ G L+ +L VK K +++ + G++Y
Sbjct: 68 IVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDK------NIIELVHQVSMGMKY 120
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
+ + +VHRD+ N+LL + AKI+DFGL K L A + + AP
Sbjct: 121 LEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 177
Query: 184 EYVRDGCVTTKSDVYAFGVVLMELITGQQALSR 216
E + ++KSDV++FGV++ E + Q R
Sbjct: 178 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 210
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPS-VKGKKPLAWTTRVQIALDAAKGLEY 123
++ +IG +S LV E A+ G L+ +L VK K +++ + G++Y
Sbjct: 74 IVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDK------NIIELVHQVSMGMKY 126
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
+ + +VHRD+ N+LL + AKI+DFGL K L A + + AP
Sbjct: 127 LEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAP 183
Query: 184 EYVRDGCVTTKSDVYAFGVVLMELITGQQALSR 216
E + ++KSDV++FGV++ E + Q R
Sbjct: 184 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 216
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K + G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 161
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 162 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLXGTPEYLAPEIILSKG 214
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPS-VKGKKPLAWTTRVQIALDAAKGLEY 123
++ +IG +S LV E A+ G L+ +L VK K +++ + G++Y
Sbjct: 90 IVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDK------NIIELVHQVSMGMKY 142
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
+ + +VHRD+ N+LL + AKI+DFGL K L A + + AP
Sbjct: 143 LEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 199
Query: 184 EYVRDGCVTTKSDVYAFGVVLMELITGQQALSR 216
E + ++KSDV++FGV++ E + Q R
Sbjct: 200 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 232
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPS-VKGKKPLAWTTRVQIALDAAKGLEY 123
++ +IG +S LV E A+ G L+ +L VK K +++ + G++Y
Sbjct: 90 IVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDK------NIIELVHQVSMGMKY 142
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
+ + +VHRD+ N+LL + AKI+DFGL K L A + + AP
Sbjct: 143 LEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 199
Query: 184 EYVRDGCVTTKSDVYAFGVVLMELITGQQALSR 216
E + ++KSDV++FGV++ E + Q R
Sbjct: 200 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 232
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K + G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 161
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 162 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 84/190 (44%), Gaps = 32/190 (16%)
Query: 54 ELKILCKV--HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRV 111
E+ IL KV H N+I+L FLV++ + G L D+L +K T ++
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE---TRKI 129
Query: 112 QIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAA 171
AL LE I K VHRD+K NILLD + K+ DFG L+ ++
Sbjct: 130 MRAL-----LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL---- 180
Query: 172 SRIVGTFGYLAPEYVRDGCVTTKS--------DVYAFGVVLMELITG--------QQALS 215
+ GT YLAPE + C + D+++ GV++ L+ G Q +
Sbjct: 181 REVCGTPSYLAPEIIE--CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML 238
Query: 216 RDANPGNNQY 225
R GN Q+
Sbjct: 239 RMIMSGNYQF 248
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN------AAIKQMKNTKS----KEFSSELKILCKV 61
+ F +G G++G+VY G + AIK+++ S KE E ++ V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAA 118
+ ++ L+G ++ L+ + G L D++ H ++ + L W ++ A
Sbjct: 77 DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 129
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL-EHSPEIAAAASRIVGT 177
KG+ Y+ VHRD+ N+L+ + KI DFGL KLL E A ++
Sbjct: 130 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 184
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++A E + T +SDV+++GV + EL+T
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGK--LRGKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EYA G + HL + +P A QI L EY+H
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 161
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+++D ++ DFG K + + GT YLAPE +
Sbjct: 162 -LIYRDLKPENLMIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN------AAIKQMKNTKS----KEFSSELKILCKV 61
+ F +G G++G+VY G + AIK+++ S KE E ++ V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAA 118
+ ++ L+G ++ L+ + G L D++ H ++ + L W ++ A
Sbjct: 78 DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 130
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL-EHSPEIAAAASRIVGT 177
KG+ Y+ VHRD+ N+L+ + KI DFGL KLL E A ++
Sbjct: 131 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 185
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++A E + T +SDV+++GV + EL+T
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPS-VKGKKPLAWTTRVQIALDAAKGLEY 123
++ +IG +S LV E A+ G L+ +L VK K +++ + G++Y
Sbjct: 70 IVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDK------NIIELVHQVSMGMKY 122
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
+ + +VHRD+ N+LL + AKI+DFGL K L A + + AP
Sbjct: 123 LEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 179
Query: 184 EYVRDGCVTTKSDVYAFGVVLMELITGQQALSR 216
E + ++KSDV++FGV++ E + Q R
Sbjct: 180 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 212
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 20/199 (10%)
Query: 20 IGQGSYGSVYLGKLRGKN-----AAIKQMKNTKS----KEFSSELKILCKV-HSNLIELI 69
IG+G +G V+ G AIK KN S ++F E + + H ++++LI
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTK 129
G + ++++ E G L L K L + + A + L Y+
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFLQ----VRKFSLDLASLILYAYQLSTALAYLESKR- 511
Query: 130 PYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG 189
+VHRD+ N+L+ + K+ DFGL + +E S A+ ++ ++APE +
Sbjct: 512 --FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFR 567
Query: 190 CVTTKSDVYAFGVVLMELI 208
T+ SDV+ FGV + E++
Sbjct: 568 RFTSASDVWMFGVCMWEIL 586
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K + G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFXEPHARFYAAQIVLT----FEYLHSLD-- 182
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 183 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 235
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPPFFAD 262
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN------AAIKQMKNTKS----KEFSSELKILCKV 61
+ F +G G++G+VY G + AIK+++ S KE E ++ V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAA 118
+ ++ L+G ++ L+ + G L D++ H ++ + L W ++ A
Sbjct: 75 DNPHVCRLLGICLTS-TVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------A 127
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL-EHSPEIAAAASRIVGT 177
KG+ Y+ VHRD+ N+L+ + KI DFGL KLL E A ++
Sbjct: 128 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 182
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++A E + T +SDV+++GV + EL+T
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPS-VKGKKPLAWTTRVQIALDAAKGLEY 123
++ +IG +S LV E A+ G L+ +L VK K +++ + G++Y
Sbjct: 80 IVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDK------NIIELVHQVSMGMKY 132
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
+ + +VHRD+ N+LL + AKI+DFGL K L A + + AP
Sbjct: 133 LEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 189
Query: 184 EYVRDGCVTTKSDVYAFGVVLMELITGQQALSR 216
E + ++KSDV++FGV++ E + Q R
Sbjct: 190 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 222
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K + G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFAEPHARFYAAQIVLT----FEYLHSLD-- 161
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 162 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPS-VKGKKPLAWTTRVQIALDAAKGLEY 123
++ +IG +S LV E A+ G L+ +L VK K +++ + G++Y
Sbjct: 88 IVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDK------NIIELVHQVSMGMKY 140
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
+ + +VHRD+ N+LL + AKI+DFGL K L A + + AP
Sbjct: 141 LEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 197
Query: 184 EYVRDGCVTTKSDVYAFGVVLMELITGQQALSR 216
E + ++KSDV++FGV++ E + Q R
Sbjct: 198 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 230
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPS-VKGKKPLAWTTRVQIALDAAKGLEY 123
++ +IG +S LV E A+ G L+ +L VK K +++ + G++Y
Sbjct: 74 IVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDK------NIIELVHQVSMGMKY 126
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
+ + +VHRD+ N+LL + AKI+DFGL K L A + + AP
Sbjct: 127 LEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 183
Query: 184 EYVRDGCVTTKSDVYAFGVVLMELITGQQALSR 216
E + ++KSDV++FGV++ E + Q R
Sbjct: 184 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 216
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 27/213 (12%)
Query: 20 IGQGSYGSVYLG-----------KLRGKNAAIKQMKNTKSKEFSSELKILCKVHSNLIEL 68
+G+GS+G V L K + K + + + S LK+L H ++I+L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL--RHPHIIKL 74
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT 128
+ +V EYA G L D+ + KK + + +EY H++
Sbjct: 75 YDVITTPTDIVMVIEYA-GGELFDY-----IVEKKRMTEDEGRRFFQQIICAIEYCHRHK 128
Query: 129 KPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRD 188
VHRD+K N+LLD N KIADFGL ++ + + G+ Y APE +
Sbjct: 129 ---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC----GSPNYAAPEVING 181
Query: 189 GCVT-TKSDVYAFGVVLMELITGQQALSRDANP 220
+ DV++ G+VL ++ G+ + P
Sbjct: 182 KLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP 214
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGK--LRGKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 162
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 163 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 215
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGK--LRGKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFXEPHARFYAAQIVLT----FEYLHSLD-- 162
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 163 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 215
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGK--LRGKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 94
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 95 SFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 147
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 148 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWTLCGTPEYLAPEIILSKG 200
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 201 YNKAVDWWALGVLIYEMAAGYPPFFAD 227
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGK--LRGKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 161
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 162 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 82/206 (39%), Gaps = 17/206 (8%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIEL 68
+ F+ K Q G Y K K + +E E+ IL ++ H N+I L
Sbjct: 35 GSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIITL 94
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT 128
+ L+ E G L D L K+ L Q G+ Y+H
Sbjct: 95 HDIFENKTDVVLILELVSGGELFDFL-----AEKESLTEDEATQFLKQILDGVHYLHS-- 147
Query: 129 KPYYVHRDVKTSNI-LLDSNF---RAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
H D+K NI LLD N R K+ DFG+ H E I GT ++APE
Sbjct: 148 -KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA----HKIEAGNEFKNIFGTPEFVAPE 202
Query: 185 YVRDGCVTTKSDVYAFGVVLMELITG 210
V + ++D+++ GV+ L++G
Sbjct: 203 IVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGK--LRGKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFXEPHARFYAAQIVLT----FEYLHSLD-- 161
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 162 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGK--LRGKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFXEPHARFYAAQIVLT----FEYLHSLD-- 161
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 162 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGK--LRGKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 161
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 162 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGK--LRGKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 161
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 162 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGK--LRGKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 162
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 163 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWTLCGTPEYLAPEIILSKG 215
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 13 NFSTSLKIGQGSYGSVYLG--KLRGKNAAIK----------QMKNTKSKEFSSELKILCK 60
N+ +G+GS+G V L G+ A+K M+ +E S L++L
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISY-LRLL-- 61
Query: 61 VHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H ++I+L D + +V EYA N L D++ V+ K R +
Sbjct: 62 RHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYI----VQRDKMSEQEAR-RFFQQIISA 115
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
+EY H++ VHRD+K N+LLD + KIADFGL ++ + + G+ Y
Sbjct: 116 VEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----GSPNY 168
Query: 181 LAPEYVRDGCVT-TKSDVYAFGVVLMELITGQQALSRDANP 220
APE + + DV++ GV+L ++ + ++ P
Sbjct: 169 AAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP 209
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 89/209 (42%), Gaps = 24/209 (11%)
Query: 20 IGQGSYGSVY-----LGKLRGKNAAIKQMK------NTKSKEFS-SELKILCKV-HSNLI 66
+G+G YG V+ G GK A+K +K N K + +E IL +V H ++
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ 126
+LI G L+L+ EY G L L + T + + L ++HQ
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGI-----FMEDTACFYLAEISMALGHLHQ 139
Query: 127 YTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV 186
++RD+K NI+L+ K+ DFGL K H GT Y+APE +
Sbjct: 140 KG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD---GTVTHXFCGTIEYMAPEIL 193
Query: 187 RDGCVTTKSDVYAFGVVLMELITGQQALS 215
D ++ G ++ +++TG +
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTGAPPFT 222
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 13 NFSTSLKIGQGSYGSVYLG--KLRGKNAAIK----------QMKNTKSKEFSSELKILCK 60
N+ +G+GS+G V L G+ A+K M+ +E S L++L
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISY-LRLL-- 71
Query: 61 VHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H ++I+L D + +V EYA N L D++ V+ K R +
Sbjct: 72 RHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYI----VQRDKMSEQEAR-RFFQQIISA 125
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
+EY H++ VHRD+K N+LLD + KIADFGL ++ + + G+ Y
Sbjct: 126 VEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----GSPNY 178
Query: 181 LAPEYVRDGCVT-TKSDVYAFGVVLMELITGQQALSRDANP 220
APE + + DV++ GV+L ++ + ++ P
Sbjct: 179 AAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP 219
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGK--LRGKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 161
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 162 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 19/168 (11%)
Query: 46 TKSKEFSSELKILCKVHSN-LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKP 104
+K +F +EL+I+ + + + G D ++++YEY +N ++ + V K
Sbjct: 85 SKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN- 143
Query: 105 LAWTTRVQIAL------DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLV 158
+T + I + YIH + HRDVK SNIL+D N R K++DFG
Sbjct: 144 --YTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGES 199
Query: 159 KLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTT--KSDVYAFGVVL 204
E+ + SR GT+ ++ PE+ + K D+++ G+ L
Sbjct: 200 ---EYMVDKKIKGSR--GTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K + G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 161
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+++D ++ DFG K + + GT YLAPE +
Sbjct: 162 -LIYRDLKPENLIIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIIISKG 214
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 89/209 (42%), Gaps = 24/209 (11%)
Query: 20 IGQGSYGSVY-----LGKLRGKNAAIKQMK------NTKSKEFS-SELKILCKV-HSNLI 66
+G+G YG V+ G GK A+K +K N K + +E IL +V H ++
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ 126
+LI G L+L+ EY G L L + T + + L ++HQ
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREGI-----FMEDTACFYLAEISMALGHLHQ 139
Query: 127 YTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV 186
++RD+K NI+L+ K+ DFGL K H GT Y+APE +
Sbjct: 140 KG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD---GTVTHTFCGTIEYMAPEIL 193
Query: 187 RDGCVTTKSDVYAFGVVLMELITGQQALS 215
D ++ G ++ +++TG +
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTGAPPFT 222
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN------AAIKQMKNTKS----KEFSSELKILCKV 61
+ F +G G++G+VY G + AIK+++ S KE E ++ V
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAA 118
+ ++ L+G ++ L+ + G L D++ H ++ + L W ++ A
Sbjct: 72 DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 124
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL-EHSPEIAAAASRIVGT 177
+G+ Y+ VHRD+ N+L+ + KI DFGL KLL E A ++
Sbjct: 125 EGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 179
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++A E + T +SDV+++GV + EL+T
Sbjct: 180 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K + G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 161
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAPE +
Sbjct: 162 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPEIILSKG 214
Query: 191 VTTKSDVYAFGVVLMELITG 210
D +A GV++ ++ G
Sbjct: 215 YNKAVDWWALGVLIYQMAAG 234
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPS-VKGKKPLAWTTRVQIALDAAKGLEY 123
++ +IG +S LV E A+ G L+ +L VK K +++ + G++Y
Sbjct: 433 IVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDK------NIIELVHQVSMGMKY 485
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
+ + +VHRD+ N+LL + AKI+DFGL K L A + + AP
Sbjct: 486 LEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 542
Query: 184 EYVRDGCVTTKSDVYAFGVVLMELITGQQALSR 216
E + ++KSDV++FGV++ E + Q R
Sbjct: 543 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 575
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 82/206 (39%), Gaps = 17/206 (8%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIEL 68
+ F+ K Q G Y K K + +E E+ IL ++ H N+I L
Sbjct: 21 GSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITL 80
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT 128
+ L+ E G L D L K+ L Q G+ Y+H
Sbjct: 81 HDIFENKTDVVLILELVSGGELFDFL-----AEKESLTEDEATQFLKQILDGVHYLHS-- 133
Query: 129 KPYYVHRDVKTSNI-LLDSNF---RAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
H D+K NI LLD N R K+ DFG+ H E I GT ++APE
Sbjct: 134 -KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA----HKIEAGNEFKNIFGTPEFVAPE 188
Query: 185 YVRDGCVTTKSDVYAFGVVLMELITG 210
V + ++D+++ GV+ L++G
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
Query: 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPS-VKGKKPLAWTTRVQIALDAAKGLEY 123
++ +IG +S LV E A+ G L+ +L VK K +++ + G++Y
Sbjct: 432 IVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDK------NIIELVHQVSMGMKY 484
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
+ + +VHRD+ N+LL + AKI+DFGL K L A + + AP
Sbjct: 485 LEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 541
Query: 184 EYVRDGCVTTKSDVYAFGVVLMELITGQQALSR 216
E + ++KSDV++FGV++ E + Q R
Sbjct: 542 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 574
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 13 NFSTSLKIGQGSYGSVYLG--KLRGKNAAIK----------QMKNTKSKEFSSELKILCK 60
N+ +G+GS+G V L G+ A+K M+ +E S L++L
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISY-LRLL-- 70
Query: 61 VHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
H ++I+L D + +V EYA N L D++ V+ K R +
Sbjct: 71 RHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYI----VQRDKMSEQEAR-RFFQQIISA 124
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
+EY H++ VHRD+K N+LLD + KIADFGL ++ + + G+ Y
Sbjct: 125 VEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----GSPNY 177
Query: 181 LAPEYVRDGCVT-TKSDVYAFGVVLMELITGQQALSRDANP 220
APE + + DV++ GV+L ++ + ++ P
Sbjct: 178 AAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP 218
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 29/222 (13%)
Query: 12 SNFSTSLKIGQGSYGSVYLG--KLRGKNAAIK----------QMKNTKSKEFSSELKILC 59
N+ +G+GS+G V L G+ A+K M+ +E S L++L
Sbjct: 8 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISY-LRLL- 65
Query: 60 KVHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAK 119
H ++I+L D + +V EYA N L D++ V+ K R +
Sbjct: 66 -RHPHIIKLYDVIKSKDEIIMVIEYAGN-ELFDYI----VQRDKMSEQEAR-RFFQQIIS 118
Query: 120 GLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG 179
+EY H++ VHRD+K N+LLD + KIADFGL ++ + + G+
Sbjct: 119 AVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----GSPN 171
Query: 180 YLAPEYVRDGCVT-TKSDVYAFGVVLMELITGQQALSRDANP 220
Y APE + + DV++ GV+L ++ + ++ P
Sbjct: 172 YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP 213
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 82/206 (39%), Gaps = 17/206 (8%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIEL 68
+ F+ K Q G Y K K + +E E+ IL ++ H N+I L
Sbjct: 14 GSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITL 73
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT 128
+ L+ E G L D L K+ L Q G+ Y+H
Sbjct: 74 HDIFENKTDVVLILELVSGGELFDFL-----AEKESLTEDEATQFLKQILDGVHYLHS-- 126
Query: 129 KPYYVHRDVKTSNI-LLDSNF---RAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
H D+K NI LLD N R K+ DFG+ H E I GT ++APE
Sbjct: 127 -KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA----HKIEAGNEFKNIFGTPEFVAPE 181
Query: 185 YVRDGCVTTKSDVYAFGVVLMELITG 210
V + ++D+++ GV+ L++G
Sbjct: 182 IVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 109/277 (39%), Gaps = 27/277 (9%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIEL 68
+ F+ K + S G Y K K + ++ E+ IL ++ H N+I L
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT 128
+ L+ E G L D L K+ L + G+ Y+H
Sbjct: 80 HEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 129 KPYYVHRDVKTSNI-LLDSNF---RAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
H D+K NI LLD N R KI DFGL H + I GT ++APE
Sbjct: 135 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----HKIDFGNEFKNIFGTPAFVAPE 187
Query: 185 YVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYML--AVFNDT 242
V + ++D+++ GV+ L++G D + + S V+Y F++T
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDT---KQETLANVSAVNYEFEDEYFSNT 244
Query: 243 ----KDFMAKLTECLDPNLTRYHKDSMLQMALLSKDC 275
KDF+ +L DP +DS+ + KD
Sbjct: 245 SALAKDFIRRLL-VKDPKKRMTIQDSLQHPWIKPKDT 280
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 26/212 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN------AAIKQMKNTKS----KEFSSELKILCKV 61
+ F +G G++G+VY G + AIK+++ S KE E ++ V
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAA 118
+ ++ L+G ++ L+ + G L D++ H ++ + L W ++ A
Sbjct: 79 DNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 131
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL-EHSPEIAAAASRIVGT 177
KG+ Y+ VHRD+ N+L+ + KI DFG KLL E A ++
Sbjct: 132 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--P 186
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++A E + T +SDV+++GV + EL+T
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 109/277 (39%), Gaps = 27/277 (9%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIEL 68
+ F+ K + S G Y K K + ++ E+ IL ++ H N+I L
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT 128
+ L+ E G L D L K+ L + G+ Y+H
Sbjct: 80 HEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 129 KPYYVHRDVKTSNI-LLDSNF---RAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
H D+K NI LLD N R KI DFGL H + I GT ++APE
Sbjct: 135 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----HKIDFGNEFKNIFGTPEFVAPE 187
Query: 185 YVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYML--AVFNDT 242
V + ++D+++ GV+ L++G D + + S V+Y F++T
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDT---KQETLANVSAVNYEFEDEYFSNT 244
Query: 243 ----KDFMAKLTECLDPNLTRYHKDSMLQMALLSKDC 275
KDF+ +L DP +DS+ + KD
Sbjct: 245 SALAKDFIRRLL-VKDPKKRMTIQDSLQHPWIKPKDT 280
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 109/277 (39%), Gaps = 27/277 (9%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIEL 68
+ F+ K + S G Y K K + ++ E+ IL ++ H N+I L
Sbjct: 19 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 78
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT 128
+ L+ E G L D L K+ L + G+ Y+H
Sbjct: 79 HEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYYLHSLQ 133
Query: 129 KPYYVHRDVKTSNI-LLDSNF---RAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
H D+K NI LLD N R KI DFGL H + I GT ++APE
Sbjct: 134 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----HKIDFGNEFKNIFGTPEFVAPE 186
Query: 185 YVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYML--AVFNDT 242
V + ++D+++ GV+ L++G D + + S V+Y F++T
Sbjct: 187 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDT---KQETLANVSAVNYEFEDEYFSNT 243
Query: 243 ----KDFMAKLTECLDPNLTRYHKDSMLQMALLSKDC 275
KDF+ +L DP +DS+ + KD
Sbjct: 244 SALAKDFIRRLL-VKDPKKRMTIQDSLQHPWIKPKDT 279
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 109/277 (39%), Gaps = 27/277 (9%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIEL 68
+ F+ K + S G Y K K + ++ E+ IL ++ H N+I L
Sbjct: 20 GSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT 128
+ L+ E G L D L K+ L + G+ Y+H
Sbjct: 80 HEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 129 KPYYVHRDVKTSNI-LLDSNF---RAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
H D+K NI LLD N R KI DFGL H + I GT ++APE
Sbjct: 135 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----HKIDFGNEFKNIFGTPEFVAPE 187
Query: 185 YVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYML--AVFNDT 242
V + ++D+++ GV+ L++G D + + S V+Y F++T
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDT---KQETLANVSAVNYEFEDEYFSNT 244
Query: 243 ----KDFMAKLTECLDPNLTRYHKDSMLQMALLSKDC 275
KDF+ +L DP +DS+ + KD
Sbjct: 245 SALAKDFIRRLL-VKDPKKRMTIQDSLQHPWIKPKDT 280
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 26/212 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN------AAIKQMKNTKS----KEFSSELKILCKV 61
+ F +G G++G+VY G + AIK+++ S KE E ++ V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAA 118
+ ++ L+G ++ L+ + G L D++ H ++ + L W ++ A
Sbjct: 77 DNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 129
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL-EHSPEIAAAASRIVGT 177
KG+ Y+ VHRD+ N+L+ + KI DFG KLL E A ++
Sbjct: 130 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--P 184
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++A E + T +SDV+++GV + EL+T
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 26/212 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN------AAIKQMKNTKS----KEFSSELKILCKV 61
+ F +G G++G+VY G + AI +++ S KE E ++ V
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAA 118
+ ++ L+G ++ L+ + G L D++ H ++ + L W ++ A
Sbjct: 109 DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 161
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL-EHSPEIAAAASRIVGT 177
KG+ Y+ VHRD+ N+L+ + KI DFGL KLL E A ++
Sbjct: 162 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 216
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++A E + T +SDV+++GV + EL+T
Sbjct: 217 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 26/212 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN------AAIKQMKNTKS----KEFSSELKILCKV 61
+ F +G G++G+VY G + AIK+++ S KE E ++ V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAA 118
+ ++ L+G ++ L+ + G L D++ H ++ + L W ++ A
Sbjct: 77 DNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 129
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL-EHSPEIAAAASRIVGT 177
KG+ Y+ VHRD+ N+L+ + KI DFG KLL E A ++
Sbjct: 130 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--P 184
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++A E + T +SDV+++GV + EL+T
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 104/235 (44%), Gaps = 55/235 (23%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV-----YLGKLRGKNAAIKQMKNTKSKEFSS----ELK 56
+V D ++ IG+G+YG V + K+R AIK++ + + + E+K
Sbjct: 37 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVR---VAIKKISPFEHQTYCQRTLREIK 93
Query: 57 ILCKV-HSNLIE-----------------LIGYAAGGDSLFLVYEYAQNGALS-DHLHWP 97
IL + H N+I L+ + G D +Y+ + LS DH+ +
Sbjct: 94 ILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGAD----LYKLLKTQHLSNDHICY- 148
Query: 98 SVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGL 157
+GL+YIH +HRD+K SN+LL++ KI DFGL
Sbjct: 149 ---------------FLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGL 190
Query: 158 VKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
++ + + + V T Y APE + + TKS D+++ G +L E+++ +
Sbjct: 191 ARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 32/217 (14%)
Query: 20 IGQGSYGSVYLGKLRG-------KNAAIKQMKN----TKSKEFSSELKILCKV--HSNLI 66
+G G++G V G A+K +K T+ + SELK+L + H N++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLHW-----------PSV--KGKKPLAWTTRVQI 113
L+G G ++ EY G L + L P++ + L +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEH-SPEIAAAAS 172
+ AKG+ ++ +HRD+ NILL KI DFGL + +++ S + +
Sbjct: 174 SYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 173 RIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
R+ ++APE + + T +SDV+++G+ L EL +
Sbjct: 231 RL--PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 109/277 (39%), Gaps = 27/277 (9%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIEL 68
+ F+ K + S G Y K K + ++ E+ IL ++ H N+I L
Sbjct: 19 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 78
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT 128
+ L+ E G L D L K+ L + G+ Y+H
Sbjct: 79 HEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYYLHSLQ 133
Query: 129 KPYYVHRDVKTSNI-LLDSNF---RAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
H D+K NI LLD N R KI DFGL H + I GT ++APE
Sbjct: 134 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----HKIDFGNEFKNIFGTPEFVAPE 186
Query: 185 YVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYML--AVFNDT 242
V + ++D+++ GV+ L++G D + + S V+Y F++T
Sbjct: 187 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDT---KQETLANVSAVNYEFEDEYFSNT 243
Query: 243 ----KDFMAKLTECLDPNLTRYHKDSMLQMALLSKDC 275
KDF+ +L DP +DS+ + KD
Sbjct: 244 SALAKDFIRRLL-VKDPKKRMTIQDSLQHPWIKPKDT 279
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 26/212 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN------AAIKQMKNTKS----KEFSSELKILCKV 61
+ F + G++G+VY G + AIK+++ S KE E ++ V
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAA 118
+ ++ L+G ++ L+ + G L D++ H ++ + L W ++ A
Sbjct: 82 DNPHVCRLLGICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 134
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL-EHSPEIAAAASRIVGT 177
KG+ Y+ VHRD+ N+L+ + KI DFGL KLL E A ++
Sbjct: 135 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 189
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++A E + T +SDV+++GV + EL+T
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 109/277 (39%), Gaps = 27/277 (9%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIEL 68
+ F+ K + S G Y K K + ++ E+ IL ++ H N+I L
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT 128
+ L+ E G L D L K+ L + G+ Y+H
Sbjct: 80 HEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 129 KPYYVHRDVKTSNI-LLDSNF---RAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
H D+K NI LLD N R KI DFGL H + I GT ++APE
Sbjct: 135 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----HKIDFGNEFKNIFGTPEFVAPE 187
Query: 185 YVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYML--AVFNDT 242
V + ++D+++ GV+ L++G D + + S V+Y F++T
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDT---KQETLANVSAVNYEFEDEYFSNT 244
Query: 243 ----KDFMAKLTECLDPNLTRYHKDSMLQMALLSKDC 275
KDF+ +L DP +DS+ + KD
Sbjct: 245 SALAKDFIRRLL-VKDPKKRMTIQDSLQHPWIKPKDT 280
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 26/212 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN------AAIKQMKNTKS----KEFSSELKILCKV 61
+ F + G++G+VY G + AIK+++ S KE E ++ V
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAA 118
+ ++ L+G ++ L+ + G L D++ H ++ + L W ++ A
Sbjct: 75 DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 127
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL-EHSPEIAAAASRIVGT 177
KG+ Y+ VHRD+ N+L+ + KI DFGL KLL E A ++
Sbjct: 128 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 182
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++A E + T +SDV+++GV + EL+T
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 32/217 (14%)
Query: 20 IGQGSYGSVYLGKLRG-------KNAAIKQMKN----TKSKEFSSELKILCKV--HSNLI 66
+G G++G V G A+K +K T+ + SELK+L + H N++
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLHW-----------PSV--KGKKPLAWTTRVQI 113
L+G G ++ EY G L + L P++ + L +
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEH-SPEIAAAAS 172
+ AKG+ ++ +HRD+ NILL KI DFGL + +++ S + +
Sbjct: 151 SYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 173 RIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
R+ ++APE + + T +SDV+++G+ L EL +
Sbjct: 208 RL--PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 32/217 (14%)
Query: 20 IGQGSYGSVYLGKLRG-------KNAAIKQMKN----TKSKEFSSELKILCKV--HSNLI 66
+G G++G V G A+K +K T+ + SELK+L + H N++
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLHW-----------PSV--KGKKPLAWTTRVQI 113
L+G G ++ EY G L + L P++ + L +
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEH-SPEIAAAAS 172
+ AKG+ ++ +HRD+ NILL KI DFGL + +++ S + +
Sbjct: 167 SYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 173 RIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
R+ ++APE + + T +SDV+++G+ L EL +
Sbjct: 224 RL--PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 109/277 (39%), Gaps = 27/277 (9%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIEL 68
+ F+ K + S G Y K K + ++ E+ IL ++ H N+I L
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT 128
+ L+ E G L D L K+ L + G+ Y+H
Sbjct: 80 HEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 129 KPYYVHRDVKTSNI-LLDSNF---RAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
H D+K NI LLD N R KI DFGL H + I GT ++APE
Sbjct: 135 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----HKIDFGNEFKNIFGTPEFVAPE 187
Query: 185 YVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYML--AVFNDT 242
V + ++D+++ GV+ L++G D + + S V+Y F++T
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDT---KQETLANVSAVNYEFEDEYFSNT 244
Query: 243 ----KDFMAKLTECLDPNLTRYHKDSMLQMALLSKDC 275
KDF+ +L DP +DS+ + KD
Sbjct: 245 SALAKDFIRRLL-VKDPKKRMTIQDSLQHPWIKPKDT 280
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 109/277 (39%), Gaps = 27/277 (9%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIEL 68
+ F+ K + S G Y K K + ++ E+ IL ++ H N+I L
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT 128
+ L+ E G L D L K+ L + G+ Y+H
Sbjct: 80 HEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 129 KPYYVHRDVKTSNI-LLDSNF---RAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
H D+K NI LLD N R KI DFGL H + I GT ++APE
Sbjct: 135 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----HKIDFGNEFKNIFGTPEFVAPE 187
Query: 185 YVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYML--AVFNDT 242
V + ++D+++ GV+ L++G D + + S V+Y F++T
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDT---KQETLANVSAVNYEFEDEYFSNT 244
Query: 243 ----KDFMAKLTECLDPNLTRYHKDSMLQMALLSKDC 275
KDF+ +L DP +DS+ + KD
Sbjct: 245 SALAKDFIRRLL-VKDPKKRMTIQDSLQHPWIKPKDT 280
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 32/217 (14%)
Query: 20 IGQGSYGSVYLGKLRG-------KNAAIKQMKN----TKSKEFSSELKILCKV--HSNLI 66
+G G++G V G A+K +K T+ + SELK+L + H N++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLHW-----------PSV--KGKKPLAWTTRVQI 113
L+G G ++ EY G L + L P++ + L +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEH-SPEIAAAAS 172
+ AKG+ ++ +HRD+ NILL KI DFGL + +++ S + +
Sbjct: 174 SYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 173 RIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
R+ ++APE + + T +SDV+++G+ L EL +
Sbjct: 231 RL--PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 26/212 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN------AAIKQMKNTKS----KEFSSELKILCKV 61
+ F +G G++G+VY G + AIK+++ S KE E ++ V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAA 118
+ ++ L+G ++ L+ + G L D++ H ++ + L W ++ A
Sbjct: 75 DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 127
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL-EHSPEIAAAASRIVGT 177
KG+ Y+ VHRD+ N+L+ + KI DFG KLL E A ++
Sbjct: 128 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--P 182
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++A E + T +SDV+++GV + EL+T
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 32/217 (14%)
Query: 20 IGQGSYGSVYLGKLRG-------KNAAIKQMKN----TKSKEFSSELKILCKV--HSNLI 66
+G G++G V G A+K +K T+ + SELK+L + H N++
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLHW-----------PSV--KGKKPLAWTTRVQI 113
L+G G ++ EY G L + L P++ + L +
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEH-SPEIAAAAS 172
+ AKG+ ++ +HRD+ NILL KI DFGL + +++ S + +
Sbjct: 169 SYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 173 RIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
R+ ++APE + + T +SDV+++G+ L EL +
Sbjct: 226 RL--PVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 23/207 (11%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K + G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 161
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT YLAP +
Sbjct: 162 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEYLAPAIILSKG 214
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRD 217
D +A GV++ E+ G D
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 26/212 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN------AAIKQMKNTKS----KEFSSELKILCKV 61
+ F + G++G+VY G + AIK+++ S KE E ++ V
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAA 118
+ ++ L+G ++ L+ + G L D++ H ++ + L W ++ A
Sbjct: 82 DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 134
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL-EHSPEIAAAASRIVGT 177
KG+ Y+ VHRD+ N+L+ + KI DFGL KLL E A ++
Sbjct: 135 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--P 189
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++A E + T +SDV+++GV + EL+T
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 23/219 (10%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV-----YLGKLRGKNAAIKQMKNTKSKEFSS----ELK 56
+V D ++ IG+G+YG V L K+R AIK++ + + + E+K
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVR---VAIKKISPFEHQTYCQRTLREIK 77
Query: 57 ILCKV-HSNLIEL--IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
IL + H N+I + I A + + VY Q+ +D + + L+
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVY-IVQDLMETDLY---KLLKTQHLSNDHICYF 133
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
+GL+YIH +HRD+K SN+LL++ KI DFGL ++ + + +
Sbjct: 134 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 190
Query: 174 IVGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + TKS D+++ G +L E+++ +
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 26/212 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN------AAIKQMKNTKS----KEFSSELKILCKV 61
+ F +G G++G+VY G + AIK+++ S KE E ++ V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAA 118
+ ++ L+G ++ L+ + G L D++ H ++ + L W ++ A
Sbjct: 77 DNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 129
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL-EHSPEIAAAASRIVGT 177
KG+ Y+ VHRD+ N+L+ + KI DFG KLL E A ++
Sbjct: 130 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--P 184
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++A E + T +SDV+++GV + EL+T
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 26/212 (12%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN------AAIKQMKNTKS----KEFSSELKILCKV 61
+ F +G G++G+VY G + AIK+++ S KE E ++ V
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 62 -HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHL--HWPSVKGKKPLAWTTRVQIALDAA 118
+ ++ L+G ++ L+ + G L D++ H ++ + L W ++ A
Sbjct: 82 DNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------A 134
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL-EHSPEIAAAASRIVGT 177
KG+ Y+ VHRD+ N+L+ + KI DFG KLL E A ++
Sbjct: 135 KGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV--P 189
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
++A E + T +SDV+++GV + EL+T
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 23/219 (10%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV-----YLGKLRGKNAAIKQMKNTKSKEFSS----ELK 56
+V D ++ IG+G+YG V L K+R AIK++ + + + E+K
Sbjct: 15 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVR---VAIKKISPFEHQTYCQRTLREIK 71
Query: 57 ILCKV-HSNLIEL--IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
IL + H N+I + I A + + VY Q+ +D + + L+
Sbjct: 72 ILLRFRHENIIGINDIIRAPTIEQMKDVY-IVQDLMETDLY---KLLKTQHLSNDHICYF 127
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
+GL+YIH +HRD+K SN+LL++ KI DFGL ++ + + +
Sbjct: 128 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 184
Query: 174 IVGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + TKS D+++ G +L E+++ +
Sbjct: 185 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 23/219 (10%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV-----YLGKLRGKNAAIKQMKNTKSKEFSS----ELK 56
+V D ++ IG+G+YG V L K+R AIK++ + + + E+K
Sbjct: 15 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVR---VAIKKISPFEHQTYCQRTLREIK 71
Query: 57 ILCKV-HSNLIEL--IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
IL + H N+I + I A + + VY Q+ +D + + L+
Sbjct: 72 ILLRFRHENIIGINDIIRAPTIEQMKDVY-IVQDLMETDLY---KLLKTQHLSNDHICYF 127
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
+GL+YIH +HRD+K SN+LL++ KI DFGL ++ + + +
Sbjct: 128 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 184
Query: 174 IVGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + TKS D+++ G +L E+++ +
Sbjct: 185 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 108/273 (39%), Gaps = 27/273 (9%)
Query: 14 FSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIELIGYA 72
F+ K + S G Y K K + ++ E+ IL ++ H N+I L
Sbjct: 24 FAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVY 83
Query: 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132
+ L+ E G L D L K+ L + G+ Y+H
Sbjct: 84 ENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYYLHSLQ---I 135
Query: 133 VHRDVKTSNI-LLDSNF---RAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRD 188
H D+K NI LLD N R KI DFGL H + I GT ++APE V
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLA----HKIDFGNEFKNIFGTPEFVAPEIVNY 191
Query: 189 GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYML--AVFNDT---- 242
+ ++D+++ GV+ L++G D + + S V+Y F++T
Sbjct: 192 EPLGLEADMWSIGVITYILLSGASPFLGDT---KQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 243 KDFMAKLTECLDPNLTRYHKDSMLQMALLSKDC 275
KDF+ +L DP +DS+ + KD
Sbjct: 249 KDFIRRLL-VKDPKKRMTIQDSLQHPWIKPKDT 280
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 15/203 (7%)
Query: 13 NFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIELIGY 71
F+ +I V+ GK+ K+ +K + K S+E+ I + + +++ G+
Sbjct: 38 GFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK---MSTEIAIHKSLDNPHVVGFHGF 94
Query: 72 AAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPY 131
D +++V E + +L + LH K +K + +G++Y+H
Sbjct: 95 FEDDDFVYVVLEICRRRSLLE-LH----KRRKAVTEPEARYFMRQTIQGVQYLHNNR--- 146
Query: 132 YVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCV 191
+HRD+K N+ L+ + KI DFGL +E E + GT Y+APE +
Sbjct: 147 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE---RKKDLCGTPNYIAPEVLCKKGH 203
Query: 192 TTKSDVYAFGVVLMELITGQQAL 214
+ + D+++ G +L L+ G+
Sbjct: 204 SFEVDIWSLGCILYTLLVGKPPF 226
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 15/203 (7%)
Query: 13 NFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIELIGY 71
F+ +I V+ GK+ K+ +K + K S+E+ I + + +++ G+
Sbjct: 54 GFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK---MSTEIAIHKSLDNPHVVGFHGF 110
Query: 72 AAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPY 131
D +++V E + +L + LH K +K + +G++Y+H
Sbjct: 111 FEDDDFVYVVLEICRRRSLLE-LH----KRRKAVTEPEARYFMRQTIQGVQYLHNNR--- 162
Query: 132 YVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCV 191
+HRD+K N+ L+ + KI DFGL +E E + GT Y+APE +
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE---RKKXLCGTPNYIAPEVLCKKGH 219
Query: 192 TTKSDVYAFGVVLMELITGQQAL 214
+ + D+++ G +L L+ G+
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPF 242
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 23/219 (10%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV-----YLGKLRGKNAAIKQMKNTKSKEFSS----ELK 56
+V D ++ IG+G+YG V L K+R AIK++ + + + E+K
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVR---VAIKKISPFEHQTYXQRTLREIK 77
Query: 57 ILCKV-HSNLIEL--IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
IL + H N+I + I A + + VY Q+ +D + + L+
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVY-IVQDLMETDLY---KLLKTQHLSNDHICYF 133
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
+GL+YIH +HRD+K SN+LL++ KI DFGL ++ + + +
Sbjct: 134 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 190
Query: 174 IVGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + TKS D+++ G +L E+++ +
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 23/219 (10%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV-----YLGKLRGKNAAIKQMKNTKSKEFSS----ELK 56
+V D ++ IG+G+YG V L K+R AIK++ + + + E+K
Sbjct: 22 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVR---VAIKKISPFEHQTYCQRTLREIK 78
Query: 57 ILCKV-HSNLIEL--IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
IL + H N+I + I A + + VY Q+ +D + + L+
Sbjct: 79 ILLRFRHENIIGINDIIRAPTIEQMKDVY-IVQDLMETDLY---KLLKTQHLSNDHICYF 134
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
+GL+YIH +HRD+K SN+LL++ KI DFGL ++ + + +
Sbjct: 135 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 191
Query: 174 IVGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + TKS D+++ G +L E+++ +
Sbjct: 192 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 109/277 (39%), Gaps = 27/277 (9%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIEL 68
+ F+ K + S G Y K K + ++ E+ IL ++ H N+I L
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT 128
+ L+ E G L D L K+ L + G+ Y+H
Sbjct: 80 HEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 129 KPYYVHRDVKTSNI-LLDSNF---RAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
H D+K NI LLD N R KI DFGL H + I GT ++APE
Sbjct: 135 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----HKIDFGNEFKNIFGTPEFVAPE 187
Query: 185 YVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYML--AVFNDT 242
V + ++D+++ GV+ L++G D + + S V+Y F++T
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDT---KQETLANVSAVNYEFEDEYFSNT 244
Query: 243 ----KDFMAKLTECLDPNLTRYHKDSMLQMALLSKDC 275
KDF+ +L DP +DS+ + KD
Sbjct: 245 SALAKDFIRRLL-VKDPKKRMTIQDSLQHPWIKPKDT 280
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 23/219 (10%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV-----YLGKLRGKNAAIKQMKNTKSKEFSS----ELK 56
+V D ++ IG+G+YG V L K+R AIK++ + + + E+K
Sbjct: 23 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVR---VAIKKISPFEHQTYCQRTLREIK 79
Query: 57 ILCKV-HSNLIEL--IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
IL + H N+I + I A + + VY Q+ +D + + L+
Sbjct: 80 ILLRFRHENIIGINDIIRAPTIEQMKDVY-IVQDLMETDLY---KLLKTQHLSNDHICYF 135
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
+GL+YIH +HRD+K SN+LL++ KI DFGL ++ + + +
Sbjct: 136 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 192
Query: 174 IVGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + TKS D+++ G +L E+++ +
Sbjct: 193 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 23/219 (10%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV-----YLGKLRGKNAAIKQMKNTKSKEFSS----ELK 56
+V D ++ IG+G+YG V L K+R AIK++ + + + E+K
Sbjct: 14 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVR---VAIKKISPFEHQTYCQRTLREIK 70
Query: 57 ILCKV-HSNLIEL--IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
IL + H N+I + I A + + VY Q+ +D + + L+
Sbjct: 71 ILLRFRHENIIGINDIIRAPTIEQMKDVY-IVQDLMETDLY---KLLKTQHLSNDHICYF 126
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
+GL+YIH +HRD+K SN+LL++ KI DFGL ++ + + +
Sbjct: 127 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 183
Query: 174 IVGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + TKS D+++ G +L E+++ +
Sbjct: 184 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 23/219 (10%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV-----YLGKLRGKNAAIKQMKNTKSKEFSS----ELK 56
+V D ++ IG+G+YG V L K+R AIK++ + + + E+K
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVR---VAIKKISPFEHQTYCQRTLREIK 77
Query: 57 ILCKV-HSNLIEL--IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
IL + H N+I + I A + + VY Q+ +D + + L+
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVY-IVQDLMETDLY---KLLKTQHLSNDHICYF 133
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
+GL+YIH +HRD+K SN+LL++ KI DFGL ++ + + +
Sbjct: 134 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 190
Query: 174 IVGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + TKS D+++ G +L E+++ +
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 15/203 (7%)
Query: 13 NFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIELIGY 71
F+ +I V+ GK+ K+ +K + K S+E+ I + + +++ G+
Sbjct: 54 GFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK---MSTEIAIHKSLDNPHVVGFHGF 110
Query: 72 AAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPY 131
D +++V E + +L + LH K +K + +G++Y+H
Sbjct: 111 FEDDDFVYVVLEICRRRSLLE-LH----KRRKAVTEPEARYFMRQTIQGVQYLHNNR--- 162
Query: 132 YVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCV 191
+HRD+K N+ L+ + KI DFGL +E E + GT Y+APE +
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE---RKKTLCGTPNYIAPEVLCKKGH 219
Query: 192 TTKSDVYAFGVVLMELITGQQAL 214
+ + D+++ G +L L+ G+
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPF 242
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 23/219 (10%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSVY-----LGKLRGKNAAIKQMKNTKSKEFSS----ELK 56
+V D ++ IG+G+YG V L K+R AIK++ + + + E+K
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVR---VAIKKISPFEHQTYCQRTLREIK 77
Query: 57 ILCKV-HSNLIEL--IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
IL + H N+I + I A + + VY Q+ +D + +K + L+
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVY-IVQDLMETDL--YKLLKCQH-LSNDHICYF 133
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
+GL+YIH +HRD+K SN+LL++ KI DFGL ++ + + +
Sbjct: 134 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 190
Query: 174 IVGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + TKS D+++ G +L E+++ +
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 92/203 (45%), Gaps = 15/203 (7%)
Query: 13 NFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIELIGY 71
F+ +I V+ GK+ K+ +K + K S+E+ I + + +++ G+
Sbjct: 54 GFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK---MSTEIAIHKSLDNPHVVGFHGF 110
Query: 72 AAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPY 131
D +++V E + +L + LH K +K + +G++Y+H
Sbjct: 111 FEDDDFVYVVLEICRRRSLLE-LH----KRRKAVTEPEARYFMRQTIQGVQYLHNNR--- 162
Query: 132 YVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCV 191
+HRD+K N+ L+ + KI DFGL +E E + GT Y+APE +
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE---RKKDLCGTPNYIAPEVLCKKGH 219
Query: 192 TTKSDVYAFGVVLMELITGQQAL 214
+ + D+++ G +L L+ G+
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPF 242
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 109/277 (39%), Gaps = 27/277 (9%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIEL 68
+ F+ K + S G Y K K + ++ E+ IL ++ H N+I L
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT 128
+ L+ E G L D L K+ L + G+ Y+H
Sbjct: 80 HEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 129 KPYYVHRDVKTSNI-LLDSNF---RAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
H D+K NI LLD N R KI DFGL H + I GT ++APE
Sbjct: 135 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----HKIDFGNEFKNIFGTPEFVAPE 187
Query: 185 YVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYML--AVFNDT 242
V + ++D+++ GV+ L++G D + + S V+Y F++T
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDT---KQETLANVSAVNYEFEDEYFSNT 244
Query: 243 ----KDFMAKLTECLDPNLTRYHKDSMLQMALLSKDC 275
KDF+ +L DP +DS+ + KD
Sbjct: 245 SALAKDFIRRLL-VKDPKKRMTIQDSLQHPWIKPKDT 280
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPE-IAAAAS 172
+ AKG+E++ +HRD+ NILL KI DFGL + + P+ + +
Sbjct: 204 SFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 260
Query: 173 RIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
R+ ++APE + D T +SDV++FGV+L E+ +
Sbjct: 261 RL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 109/277 (39%), Gaps = 27/277 (9%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIEL 68
+ F+ K + S G Y K K + ++ E+ IL ++ H N+I L
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT 128
+ L+ E G L D L K+ L + G+ Y+H
Sbjct: 80 HEVYENKTDVILIGELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 129 KPYYVHRDVKTSNI-LLDSNF---RAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
H D+K NI LLD N R KI DFGL H + I GT ++APE
Sbjct: 135 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----HKIDFGNEFKNIFGTPEFVAPE 187
Query: 185 YVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYML--AVFNDT 242
V + ++D+++ GV+ L++G D + + S V+Y F++T
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDT---KQETLANVSAVNYEFEDEYFSNT 244
Query: 243 ----KDFMAKLTECLDPNLTRYHKDSMLQMALLSKDC 275
KDF+ +L DP +DS+ + KD
Sbjct: 245 SALAKDFIRRLL-VKDPKKRMTIQDSLQHPWIKPKDT 280
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPE-IAAAAS 172
+ AKG+E++ +HRD+ NILL KI DFGL + + P+ + +
Sbjct: 206 SFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 262
Query: 173 RIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
R+ ++APE + D T +SDV++FGV+L E+ +
Sbjct: 263 RL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPE-IAAAAS 172
+ AKG+E++ +HRD+ NILL KI DFGL + + P+ + +
Sbjct: 197 SFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 253
Query: 173 RIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
R+ ++APE + D T +SDV++FGV+L E+ +
Sbjct: 254 RL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPE-IAAAAS 172
+ AKG+E++ +HRD+ NILL KI DFGL + + P+ + +
Sbjct: 199 SFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255
Query: 173 RIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT 209
R+ ++APE + D T +SDV++FGV+L E+ +
Sbjct: 256 RL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 23/219 (10%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV-----YLGKLRGKNAAIKQMKNTKSKEFSS----ELK 56
+V D ++ IG+G+YG V L K+R AIK++ + + + E+K
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVR---VAIKKISPFEHQTYCQRTLREIK 77
Query: 57 ILCKV-HSNLIEL--IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
IL + H N+I + I A + + VY Q+ +D + + L+
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVY-IVQDLMETDLY---KLLKTQHLSNDHICYF 133
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
+GL+YIH +HRD+K SN+LL++ KI DFGL ++ + +
Sbjct: 134 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXE 190
Query: 174 IVGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + TKS D+++ G +L E+++ +
Sbjct: 191 XVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 23/219 (10%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV-----YLGKLRGKNAAIKQMKNTKSKEFSS----ELK 56
+V D ++ IG+G+YG V L K+R AIK++ + + + E+K
Sbjct: 22 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVR---VAIKKISPFEHQTYCQRTLREIK 78
Query: 57 ILCKV-HSNLIEL--IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
IL + H N+I + I A + + VY Q+ +D + + L+
Sbjct: 79 ILLRFRHENIIGINDIIRAPTIEQMKDVY-IVQDLMETDLY---KLLKTQHLSNDHICYF 134
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
+GL+YIH +HRD+K SN+LL++ KI DFGL ++ + +
Sbjct: 135 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXE 191
Query: 174 IVGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + TKS D+++ G +L E+++ +
Sbjct: 192 XVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 100/248 (40%), Gaps = 25/248 (10%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIEL 68
+ F+ K + S G Y K K + + +E E+ IL +V H N+I L
Sbjct: 21 GSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITL 80
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT 128
+ L+ E G L D L K+ L+ G+ Y+H T
Sbjct: 81 HDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYLH--T 133
Query: 129 KPYYVHRDVKTSNI-LLDSNF---RAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
K H D+K NI LLD N K+ DFGL H E I GT ++APE
Sbjct: 134 KKI-AHFDLKPENIMLLDKNIPIPHIKLIDFGLA----HEIEDGVEFKNIFGTPEFVAPE 188
Query: 185 YVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKD 244
V + ++D+++ GV+ L++G D T+ +L + ++ ++
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSGASPFLGD--------TKQETLANITAVSYDFDEE 240
Query: 245 FMAKLTEC 252
F ++ +E
Sbjct: 241 FFSQTSEL 248
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 103/223 (46%), Gaps = 40/223 (17%)
Query: 19 KIGQGSYGSVY--LGKLRGKNAAIKQM-----KNTKSKEFSSELKILCKV--HSNLIELI 69
K+G+G+YG V+ + + G+ A+K++ +T ++ E+ IL ++ H N++ L+
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 70 GY--AAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQY 127
A ++LV++Y + LH +V L + + K ++Y+H
Sbjct: 76 NVLRADNDRDVYLVFDYMETD-----LH--AVIRANILEPVHKQYVVYQLIKVIKYLHSG 128
Query: 128 TKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL------------------EHSPEIAA 169
+HRD+K SNILL++ K+ADFGL + E+ +
Sbjct: 129 G---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 170 AASRIVGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
+ V T Y APE + TK D+++ G +L E++ G+
Sbjct: 186 ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 106/267 (39%), Gaps = 27/267 (10%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIEL 68
+ F+ K + S G Y K K + ++ E+ IL ++ H N+I L
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT 128
+ L+ E G L D L K+ L + G+ Y+H
Sbjct: 80 HEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 129 KPYYVHRDVKTSNI-LLDSNF---RAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
H D+K NI LLD N R KI DFGL H + I GT ++APE
Sbjct: 135 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----HKIDFGNEFKNIFGTPEFVAPE 187
Query: 185 YVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYML--AVFNDT 242
V + ++D+++ GV+ L++G D + + S V+Y F++T
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDT---KQETLANVSAVNYEFEDEYFSNT 244
Query: 243 ----KDFMAKLTECLDPNLTRYHKDSM 265
KDF+ +L DP +DS+
Sbjct: 245 SALAKDFIRRLL-VKDPKKRMTIQDSL 270
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 23/219 (10%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV-----YLGKLRGKNAAIKQMKNTKSKEFSS----ELK 56
+V D ++ IG+G+YG V L K+R AI+++ + + + E+K
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVR---VAIRKISPFEHQTYCQRTLREIK 77
Query: 57 ILCKV-HSNLIEL--IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
IL + H N+I + I A + + VY Q+ +D + + L+
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVY-IVQDLMETDLY---KLLKTQHLSNDHICYF 133
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
+GL+YIH +HRD+K SN+LL++ KI DFGL ++ + + +
Sbjct: 134 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 190
Query: 174 IVGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + TKS D+++ G +L E+++ +
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 107/253 (42%), Gaps = 49/253 (19%)
Query: 12 SNFSTSLKIGQGSYGSVYLGK--LRGKNAAIKQMK----NTKSKEFSSELKILCKVH--- 62
++F +G+G +G V+ K + N AIK+++ ++ E+K L K+
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 63 ----------SNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTR-- 110
N E + ++ L++ + + L D W + G+ + R
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKD---W--MNGRCTIEERERSV 119
Query: 111 -VQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAA 169
+ I L A+ +E++H +HRD+K SNI + K+ DFGLV ++ E
Sbjct: 120 CLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 176
Query: 170 AASRI---------VGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANP 220
+ + VGT Y++PE + + K D+++ G++L EL+ P
Sbjct: 177 VLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY----------P 226
Query: 221 GNNQYTEHRSLVD 233
+ Q R+L D
Sbjct: 227 FSTQMERVRTLTD 239
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 106/267 (39%), Gaps = 27/267 (10%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIEL 68
+ F+ K + S G Y K K + ++ E+ IL ++ H N+I L
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT 128
+ L+ E G L D L K+ L + G+ Y+H
Sbjct: 80 HEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 129 KPYYVHRDVKTSNI-LLDSNF---RAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
H D+K NI LLD N R KI DFGL H + I GT ++APE
Sbjct: 135 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA----HKIDFGNEFKNIFGTPEFVAPE 187
Query: 185 YVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYML--AVFNDT 242
V + ++D+++ GV+ L++G D + + S V+Y F++T
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASPFLGDT---KQETLANVSAVNYEFEDEYFSNT 244
Query: 243 ----KDFMAKLTECLDPNLTRYHKDSM 265
KDF+ +L DP +DS+
Sbjct: 245 SALAKDFIRRLL-VKDPKKRMTIQDSL 270
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 24/214 (11%)
Query: 19 KIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKE--FSSELKILCKV----HSNLIELIG 70
KIG+G+YG+V+ K R + A+K+++ E SS L+ +C + H N++ L
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 71 YAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
L LV+E+ ++ S G L KGL + H
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKK---YFDSCNGD--LDPEIVKSFLFQLLKGLGFCHSRN-- 121
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
+HRD+K N+L++ N K+ADFGL + +A V T Y P+ +
Sbjct: 122 -VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAE---VVTLWYRPPDVLFGAK 177
Query: 191 V-TTKSDVYAFGVVLMELITGQQALSRDANPGNN 223
+ +T D+++ G + EL + L PGN+
Sbjct: 178 LYSTSIDMWSAGCIFAELANAARPLF----PGND 207
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 23/200 (11%)
Query: 20 IGQGSYGSVYLGKLR--GKNAAIK---QMKNTKSKEFS---SELKILCKVHSNLIELIGY 71
+G GS+G V L K + G + A+K + K K K+ +E +IL V+ + + +
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 72 AAGGDS-LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
+ +S L++V EY G + HL + +P A QI L EY+H
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLT----FEYLHSLD-- 161
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
++RD+K N+L+D ++ DFG K + + GT LAPE +
Sbjct: 162 -LIYRDLKPENLLIDQQGYIQVTDFGFAK------RVKGRTWXLCGTPEALAPEIILSKG 214
Query: 191 VTTKSDVYAFGVVLMELITG 210
D +A GV++ E+ G
Sbjct: 215 YNKAVDWWALGVLIYEMAAG 234
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 85/206 (41%), Gaps = 17/206 (8%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIEL 68
+ F+ K + S G Y K K + + +E E+ IL +V H N+I L
Sbjct: 21 GSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITL 80
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT 128
+ L+ E G L D L K+ L+ G+ Y+H T
Sbjct: 81 HDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYLH--T 133
Query: 129 KPYYVHRDVKTSNI-LLDSNF---RAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
K H D+K NI LLD N K+ DFGL H E I GT ++APE
Sbjct: 134 KKI-AHFDLKPENIMLLDKNIPIPHIKLIDFGLA----HEIEDGVEFKNIFGTPEFVAPE 188
Query: 185 YVRDGCVTTKSDVYAFGVVLMELITG 210
V + ++D+++ GV+ L++G
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 23/219 (10%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV-----YLGKLRGKNAAIKQMKNTKSKEFSS----ELK 56
+V D ++ IG+G+YG V + K+R AIK++ + + + E+K
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVR---VAIKKISPFEHQTYCQRTLREIK 73
Query: 57 ILCKV-HSNLIEL--IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
IL + H N+I + I A + + VY Q+ +D + + L+
Sbjct: 74 ILLRFRHENIIGINDIIRAPTIEQMKDVY-IVQDLMETDLY---KLLKTQHLSNDHICYF 129
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
+GL+YIH +HRD+K SN+LL++ KI DFGL ++ + + +
Sbjct: 130 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 186
Query: 174 IVGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + TKS D+++ G +L E+++ +
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 100/247 (40%), Gaps = 25/247 (10%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIEL 68
+ F+ K + S G Y K K + + +E E+ IL +V H N+I L
Sbjct: 21 GSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITL 80
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT 128
+ L+ E G L D L K+ L+ G+ Y+H T
Sbjct: 81 HDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYLH--T 133
Query: 129 KPYYVHRDVKTSNI-LLDSNF---RAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
K H D+K NI LLD N K+ DFGL H E I GT ++APE
Sbjct: 134 KKI-AHFDLKPENIMLLDKNIPIPHIKLIDFGLA----HEIEDGVEFKNIFGTPEFVAPE 188
Query: 185 YVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKD 244
V + ++D+++ GV+ L++G D T+ +L + ++ ++
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSGASPFLGD--------TKQETLANITAVSYDFDEE 240
Query: 245 FMAKLTE 251
F ++ +E
Sbjct: 241 FFSQTSE 247
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 121/268 (45%), Gaps = 30/268 (11%)
Query: 4 YNEVRDAT-SNFSTSLKIGQGSYGSVYLGKLRG--KNAAIKQMKNTKSKEFSS------E 54
++E D +F IG+GS+G V + + K A+K M K E + E
Sbjct: 6 FDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKE 65
Query: 55 LKILCKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
L+I+ + H L+ L + +F+V + G L HL +V K+ T ++ I
Sbjct: 66 LQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQ-QNVHFKEE---TVKLFI 121
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
+ L+Y+ +HRD+K NILLD + I DF + +L +I A
Sbjct: 122 C-ELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMA-- 175
Query: 174 IVGTFGYLAPEYV--RDGC-VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQ--YTEH 228
GT Y+APE R G + D ++ GV EL+ G++ ++ + + +T
Sbjct: 176 --GTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFE 233
Query: 229 RSLVDYMLAVFNDTKDFMAKLTECLDPN 256
++V Y A +++ ++ L + L+PN
Sbjct: 234 TTVVTYPSAW---SQEMVSLLKKLLEPN 258
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 23/219 (10%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV-----YLGKLRGKNAAIKQMKNTKSKEFSS----ELK 56
+V D ++ IG+G+YG V + K+R AIK++ + + + E+K
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVR---VAIKKISPFEHQTYCQRTLREIK 73
Query: 57 ILCKV-HSNLIEL--IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
IL + H N+I + I A + + VY Q+ +D + + L+
Sbjct: 74 ILLRFRHENIIGINDIIRAPTIEQMKDVY-IVQDLMETDLY---KLLKTQHLSNDHICYF 129
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
+GL+YIH +HRD+K SN+LL++ KI DFGL ++ + + +
Sbjct: 130 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 186
Query: 174 IVGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + TKS D+++ G +L E+++ +
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 100/248 (40%), Gaps = 25/248 (10%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIEL 68
+ F+ K + S G Y K K + + +E E+ IL +V H N+I L
Sbjct: 21 GSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITL 80
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT 128
+ L+ E G L D L K+ L+ G+ Y+H T
Sbjct: 81 HDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYLH--T 133
Query: 129 KPYYVHRDVKTSNI-LLDSNF---RAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
K H D+K NI LLD N K+ DFGL H E I GT ++APE
Sbjct: 134 KKI-AHFDLKPENIMLLDKNIPIPHIKLIDFGLA----HEIEDGVEFKNIFGTPEFVAPE 188
Query: 185 YVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKD 244
V + ++D+++ GV+ L++G D T+ +L + ++ ++
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSGASPFLGD--------TKQETLANITAVSYDFDEE 240
Query: 245 FMAKLTEC 252
F ++ +E
Sbjct: 241 FFSQTSEL 248
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 23/219 (10%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV-----YLGKLRGKNAAIKQMKNTKSKEFSS----ELK 56
+V D ++ IG+G+YG V + K+R AIK++ + + + E+K
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVR---VAIKKISPFEHQTYCQRTLREIK 73
Query: 57 ILCKV-HSNLIEL--IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
IL + H N+I + I A + + VY Q+ +D + + L+
Sbjct: 74 ILLRFRHENIIGINDIIRAPTIEQMKDVY-IVQDLMETDLY---KLLKTQHLSNDHICYF 129
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
+GL+YIH +HRD+K SN+LL++ KI DFGL ++ + + +
Sbjct: 130 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 186
Query: 174 IVGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + TKS D+++ G +L E+++ +
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 105/213 (49%), Gaps = 17/213 (7%)
Query: 9 DATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKNTKSKEFSS----ELKILCKV- 61
D ++ IG+G+YG V +R AIK++ + + + E++IL +
Sbjct: 40 DVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFR 99
Query: 62 HSNLIEL--IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAK 119
H N+I + I A+ +++ VY Q+ +D + +K ++ L+ +
Sbjct: 100 HENVIGIRDILRASTLEAMRDVY-IVQDLMETDL--YKLLKSQQ-LSNDHICYFLYQILR 155
Query: 120 GLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG 179
GL+YIH +HRD+K SN+L+++ KI DFGL ++ + + + V T
Sbjct: 156 GLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRW 212
Query: 180 YLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
Y APE + + TKS D+++ G +L E+++ +
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 23/219 (10%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV-----YLGKLRGKNAAIKQMKNTKSKEFSS----ELK 56
+V D ++ IG+G+YG V + K+R AIK++ + + + E+K
Sbjct: 25 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVR---VAIKKISPFEHQTYCQRTLREIK 81
Query: 57 ILCKV-HSNLIEL--IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
IL + H N+I + I A + + VY Q+ +D + + L+
Sbjct: 82 ILLRFRHENIIGINDIIRAPTIEQMKDVY-IVQDLMETDLY---KLLKTQHLSNDHICYF 137
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
+GL+YIH +HRD+K SN+LL++ KI DFGL ++ + + +
Sbjct: 138 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 194
Query: 174 IVGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + TKS D+++ G +L E+++ +
Sbjct: 195 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 23/219 (10%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV-----YLGKLRGKNAAIKQMKNTKSKEFSS----ELK 56
+V D ++ IG+G+YG V + K+R AIK++ + + + E+K
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVR---VAIKKISPFEHQTYCQRTLREIK 73
Query: 57 ILCKV-HSNLIEL--IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
IL + H N+I + I A + + VY Q+ +D + + L+
Sbjct: 74 ILLRFRHENIIGINDIIRAPTIEQMKDVY-IVQDLMETDLY---KLLKTQHLSNDHICYF 129
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
+GL+YIH +HRD+K SN+LL++ KI DFGL ++ + + +
Sbjct: 130 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 186
Query: 174 IVGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + TKS D+++ G +L E+++ +
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 23/219 (10%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSVY-----LGKLRGKNAAIKQMKNTKSKEFSS----ELK 56
+V D ++ IG+G+YG V + K+R AIK++ + + + E+K
Sbjct: 19 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVR---VAIKKISPFEHQTYCQRTLREIK 75
Query: 57 ILCKV-HSNLIEL--IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
IL + H N+I + I A + + VY Q+ +D + + L+
Sbjct: 76 ILLRFRHENIIGINDIIRAPTIEQMKDVY-IVQDLMETDLY---KLLKTQHLSNDHICYF 131
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
+GL+YIH +HRD+K SN+LL++ KI DFGL ++ + + +
Sbjct: 132 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 188
Query: 174 IVGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + TKS D+++ G +L E+++ +
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 23/219 (10%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV-----YLGKLRGKNAAIKQMKNTKSKEFSS----ELK 56
+V D ++ IG+G+YG V + K+R AIK++ + + + E+K
Sbjct: 37 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVR---VAIKKISPFEHQTYCQRTLREIK 93
Query: 57 ILCKV-HSNLIEL--IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
IL + H N+I + I A + + VY Q+ +D + + L+
Sbjct: 94 ILLRFRHENIIGINDIIRAPTIEQMKDVY-IVQDLMETDLY---KLLKTQHLSNDHICYF 149
Query: 114 ALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASR 173
+GL+YIH +HRD+K SN+LL++ KI DFGL ++ + + +
Sbjct: 150 LYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 206
Query: 174 IVGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + TKS D+++ G +L E+++ +
Sbjct: 207 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTF 178
+GL+YIH +HRD+K SN+LL++ KI DFGL ++ + + + V T
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATR 191
Query: 179 GYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
Y APE + + TKS D+++ G +L E+++ +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 85/206 (41%), Gaps = 17/206 (8%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIEL 68
+ F+ K + S G Y K K + + +E E+ IL +V H N+I L
Sbjct: 21 GSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITL 80
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT 128
+ L+ E G L D L K+ L+ G+ Y+H T
Sbjct: 81 HDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYLH--T 133
Query: 129 KPYYVHRDVKTSNI-LLDSNF---RAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
K H D+K NI LLD N K+ DFGL H E I GT ++APE
Sbjct: 134 KKI-AHFDLKPENIMLLDKNIPIPHIKLIDFGLA----HEIEDGVEFKNIFGTPEFVAPE 188
Query: 185 YVRDGCVTTKSDVYAFGVVLMELITG 210
V + ++D+++ GV+ L++G
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTF 178
+GL+YIH +HRD+K SN+LL++ KI DFGL ++ + + + V T
Sbjct: 137 RGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 179 GYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
Y APE + + TKS D+++ G +L E+++ +
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTF 178
+GL+YIH +HRD+K SN+LL++ KI DFGL ++ + + + V T
Sbjct: 137 RGLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 179 GYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
Y APE + + TKS D+++ G +L E+++ +
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 85/206 (41%), Gaps = 17/206 (8%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIEL 68
+ F+ K + S G Y K K + + +E E+ IL +V H N+I L
Sbjct: 21 GSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITL 80
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT 128
+ L+ E G L D L K+ L+ G+ Y+H T
Sbjct: 81 HDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYLH--T 133
Query: 129 KPYYVHRDVKTSNI-LLDSNF---RAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
K H D+K NI LLD N K+ DFGL H E I GT ++APE
Sbjct: 134 KKI-AHFDLKPENIMLLDKNIPIPHIKLIDFGLA----HEIEDGVEFKNIFGTPEFVAPE 188
Query: 185 YVRDGCVTTKSDVYAFGVVLMELITG 210
V + ++D+++ GV+ L++G
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 98/225 (43%), Gaps = 30/225 (13%)
Query: 20 IGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKIL---CKVHSNLIELIGYAAG 74
IG G++G L + + N A+K ++ + + + + +I+ H N++
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
L +V EYA G L + + + + + I+ G+ Y H H
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-----GVSYAHAMQ---VAH 138
Query: 135 RDVKTSNILLDSNF--RAKIADFGLVK--LLEHSPEIAAAASRIVGTFGYLAPEYVR--- 187
RD+K N LLD + R KIADFG K +L P+ A VGT Y+APE +
Sbjct: 139 RDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSA------VGTPAYIAPEVLLKKE 192
Query: 188 -DGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSL 231
DG V +DV++ GV L ++ G P N + T HR L
Sbjct: 193 YDGKV---ADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 39/257 (15%)
Query: 19 KIGQGSYGSVYLGKLR-GKNAAIKQMKNTKSKE-----FSSELKILCKV-HSNLIELIGY 71
KIG+G+YG VY + G+ A+K+++ K E E+ IL ++ HSN+++L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 72 AAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPY 131
L LV+E+ L L + L T L G+ Y H
Sbjct: 69 IHTKKRLVLVFEH-----LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR--- 120
Query: 132 YVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG-C 190
+HRD+K N+L++ KIADFGL + + IV T Y AP+ +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEIV-TLWYRAPDVLMGSKK 177
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN-----DTKDF 245
+T D+++ G + E++ G PG ++ D ++ +F ++K++
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLF-----PGVSE-------ADQLMRIFRILGTPNSKNW 225
Query: 246 MAKLTEC--LDPNLTRY 260
+TE DPN T Y
Sbjct: 226 -PNVTELPKYDPNFTVY 241
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 10/100 (10%)
Query: 112 QIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAA 171
+IA+ K LE++H +K +HRDVK SN+L+++ + K+ DFG+ L S A
Sbjct: 157 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDS----VAK 210
Query: 172 SRIVGTFGYLAPEYVRDGC----VTTKSDVYAFGVVLMEL 207
+ G Y+APE + + KSD+++ G+ ++EL
Sbjct: 211 TIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 87/183 (47%), Gaps = 21/183 (11%)
Query: 41 KQMKNTKSKEFSS-ELKILCKVHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSV 99
KQ + +S+ F E+ C+ H N++ELI + D +LV+E + G++ H+H
Sbjct: 48 KQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIH--KR 105
Query: 100 KGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFR---AKIADFG 156
+ L + VQ D A L+++H HRD+K NIL + + KI DFG
Sbjct: 106 RHFNELEASVVVQ---DVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFG 159
Query: 157 L---VKL-LEHSPEIAAAASRIVGTFGYLAPEYV-----RDGCVTTKSDVYAFGVVLMEL 207
L +KL + SP G+ Y+APE V + D+++ GV+L L
Sbjct: 160 LGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYIL 219
Query: 208 ITG 210
++G
Sbjct: 220 LSG 222
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 111 VQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPE---- 166
+ I + A+ +E++H +HRD+K SNI + K+ DFGLV ++ E
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 167 ---IAAAASRI--VGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELI 208
+ A A+ VGT Y++PE + + K D+++ G++L EL+
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 112/257 (43%), Gaps = 39/257 (15%)
Query: 19 KIGQGSYGSVYLGKLR-GKNAAIKQMKNTKSKE-----FSSELKILCKV-HSNLIELIGY 71
KIG+G+YG VY + G+ A+K+++ K E E+ IL ++ HSN+++L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 72 AAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPY 131
L LV+E+ L L + L T L G+ Y H
Sbjct: 69 IHTKKRLVLVFEH-----LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR--- 120
Query: 132 YVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG-C 190
+HRD+K N+L++ KIADFGL + + +V T Y AP+ +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEVV-TLWYRAPDVLMGSKK 177
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN-----DTKDF 245
+T D+++ G + E++ G PG ++ D ++ +F ++K++
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLF-----PGVSE-------ADQLMRIFRILGTPNSKNW 225
Query: 246 MAKLTEC--LDPNLTRY 260
+TE DPN T Y
Sbjct: 226 -PNVTELPKYDPNFTVY 241
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 112/257 (43%), Gaps = 39/257 (15%)
Query: 19 KIGQGSYGSVYLGKLR-GKNAAIKQMKNTKSKE-----FSSELKILCKV-HSNLIELIGY 71
KIG+G+YG VY + G+ A+K+++ K E E+ IL ++ HSN+++L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 72 AAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPY 131
L LV+E+ L L + L T L G+ Y H
Sbjct: 69 IHTKKRLVLVFEH-----LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR--- 120
Query: 132 YVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG-C 190
+HRD+K N+L++ KIADFGL + + +V T Y AP+ +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEVV-TLWYRAPDVLMGSKK 177
Query: 191 VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN-----DTKDF 245
+T D+++ G + E++ G PG ++ D ++ +F ++K++
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGAPLF-----PGVSE-------ADQLMRIFRILGTPNSKNW 225
Query: 246 MAKLTEC--LDPNLTRY 260
+TE DPN T Y
Sbjct: 226 -PNVTELPKYDPNFTVY 241
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKNT-----KSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 19 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 76 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + A
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAG---F 182
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 24/214 (11%)
Query: 19 KIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKE--FSSELKILCKV----HSNLIELIG 70
KIG+G+YG+V+ K R + A+K+++ E SS L+ +C + H N++ L
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 71 YAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
L LV+E+ ++ S G L KGL + H
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKK---YFDSCNGD--LDPEIVKSFLFQLLKGLGFCHSRN-- 121
Query: 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC 190
+HRD+K N+L++ N K+A+FGL + +A V T Y P+ +
Sbjct: 122 -VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAE---VVTLWYRPPDVLFGAK 177
Query: 191 V-TTKSDVYAFGVVLMELITGQQALSRDANPGNN 223
+ +T D+++ G + EL + L PGN+
Sbjct: 178 LYSTSIDMWSAGCIFAELANAGRPLF----PGND 207
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKNT-----KSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 19 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 76 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + A
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAG---F 182
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKNT-----KSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 15 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + A T VQ +
Sbjct: 72 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLI 127
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 128 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 178
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKNT-----KSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 15 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 72 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 127
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + A
Sbjct: 128 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAG---F 178
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 95/223 (42%), Gaps = 26/223 (11%)
Query: 20 IGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKIL---CKVHSNLIELIGYAAG 74
IG G++G L + + N A+K ++ + + + + +I+ H N++
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 85
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
L +V EYA G L + + + + + I+ G+ Y H H
Sbjct: 86 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-----GVSYCHAMQ---VCH 137
Query: 135 RDVKTSNILLDSNF--RAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV----RD 188
RD+K N LLD + R KI DFG K S + + VGT Y+APE + D
Sbjct: 138 RDLKLENTLLDGSPAPRLKICDFGYSK----SSVLHSQPKSTVGTPAYIAPEVLLKKEYD 193
Query: 189 GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSL 231
G V +DV++ GV L ++ G P N + T HR L
Sbjct: 194 GKV---ADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 233
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 42/212 (19%)
Query: 20 IGQGSYGSV--YLGKLRGKNAAIKQMKNTKSKEFSSEL--------KILCK--VHSNLIE 67
+G G+YGSV + K G+ AIK++ S+ F SE+ +L K H N+I
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKL----SRPFQSEIFAKRAYRELLLLKHMQHENVIG 87
Query: 68 LIGYAAGGDSL------FLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQ-IALDAAKG 120
L+ SL +LV + Q + G K ++Q + KG
Sbjct: 88 LLDVFTPASSLRNFYDFYLVMPFMQTDL-------QKIMGLK--FSEEKIQYLVYQMLKG 138
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
L+YIH VHRD+K N+ ++ + KI DFGL + H+ A + V T Y
Sbjct: 139 LKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR---HA---DAEMTGYVVTRWY 189
Query: 181 LAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
APE + ++ D+++ G ++ E++TG+
Sbjct: 190 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKN-----TKSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 26 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 83 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 138
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + A +
Sbjct: 139 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTADEMTGY 189
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKN-----TKSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 26 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 83 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 138
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + A +
Sbjct: 139 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTADEMTGY 189
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKNT-----KSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 26 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 83 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 138
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + A +
Sbjct: 139 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR------HTADEMTGY 189
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 107/221 (48%), Gaps = 31/221 (14%)
Query: 13 NFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMK-----NTKSKEFSSE---LKILCKVHSN 64
NF T K+ + G ++ G+ +G + +K +K KS++F+ E L+I H N
Sbjct: 13 NFLT--KLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFS--HPN 68
Query: 65 LIELIG--YAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTR-VQIALDAAKGL 121
++ ++G + L+ + G+L + LH +G + ++ V+ ALD A+G+
Sbjct: 69 VLPVLGACQSPPAPHPTLITHWMPYGSLYNVLH----EGTNFVVDQSQAVKFALDMARGM 124
Query: 122 EYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYL 181
++H +P + + ++++D + A+I+ VK SP A + ++
Sbjct: 125 AFLHTL-EPLIPRHALNSRSVMIDEDMTARIS-MADVKFSFQSPGRMYAPA-------WV 175
Query: 182 APEYVRDGCVTTK---SDVYAFGVVLMELITGQQALSRDAN 219
APE ++ T +D+++F V+L EL+T + + +N
Sbjct: 176 APEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN 216
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKN-----TKSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 19 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 76 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 182
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 183 VATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 104/237 (43%), Gaps = 35/237 (14%)
Query: 7 VRDATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMKNTKSKEFS----SELKILCK 60
V + +S+F +G+G+YG V K G+ AIK+++ F+ E+KIL
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 61 V-HSNLIELIGYAAGG-----DSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIA 114
H N+I + + ++++ E Q LH V + L+
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTD-----LH--RVISTQMLSDDHIQYFI 118
Query: 115 LDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAAS-- 172
+ ++ +H +HRD+K SN+L++SN K+ DFGL ++++ S + +
Sbjct: 119 YQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 173 -----RIVGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRDANPGNN 223
V T Y APE + +++ DV++ G +L EL L R PG +
Sbjct: 176 QSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF-----LRRPIFPGRD 227
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 94/223 (42%), Gaps = 26/223 (11%)
Query: 20 IGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKIL---CKVHSNLIELIGYAAG 74
IG G++G L + + N A+K ++ + + + +I+ H N++
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILT 86
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
L +V EYA G L + + + + + I+ G+ Y H H
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-----GVSYCHAMQ---VCH 138
Query: 135 RDVKTSNILLDSNF--RAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV----RD 188
RD+K N LLD + R KI DFG K S + + VGT Y+APE + D
Sbjct: 139 RDLKLENTLLDGSPAPRLKICDFGYSK----SSVLHSQPKSTVGTPAYIAPEVLLKKEYD 194
Query: 189 GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSL 231
G V +DV++ GV L ++ G P N + T HR L
Sbjct: 195 GKV---ADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKN-----TKSKEFSSELKIL 58
EV + N S IG G+YGSV G A+K++ +K EL++L
Sbjct: 24 EVPERYQNLS---PIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 81 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 136
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 137 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR---HTDD---EMTGY 187
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 104/237 (43%), Gaps = 35/237 (14%)
Query: 7 VRDATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMKNTKSKEFS----SELKILCK 60
V + +S+F +G+G+YG V K G+ AIK+++ F+ E+KIL
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 61 V-HSNLIELIGYAAGG-----DSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIA 114
H N+I + + ++++ E Q LH V + L+
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTD-----LH--RVISTQMLSDDHIQYFI 118
Query: 115 LDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPE-------I 167
+ ++ +H +HRD+K SN+L++SN K+ DFGL ++++ S
Sbjct: 119 YQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 168 AAAASRIVGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRDANPGNN 223
+ + V T Y APE + +++ DV++ G +L EL L R PG +
Sbjct: 176 QSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF-----LRRPIFPGRD 227
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 27/208 (12%)
Query: 20 IGQGSYGSVY--LGKLRGKNAAIKQM---KNTKSKEFSSE-LK---ILCKV--HSNLIEL 68
IG+G++ V + + G+ A+K + K T S S+E LK +C + H +++EL
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG---KKPLAWTTRVQIALDAAKGLEYIH 125
+ + L++V+E+ L + + G + +A QI + L Y H
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL----EALRYCH 147
Query: 126 QYTKPYYVHRDVKTSNILL---DSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLA 182
+HRDVK N+LL +++ K+ DFG+ L S +A VGT ++A
Sbjct: 148 DNN---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGR---VGTPHFMA 201
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITG 210
PE V+ DV+ GV+L L++G
Sbjct: 202 PEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 40/211 (18%)
Query: 20 IGQGSYGSV--YLGKLRGKNAAIKQMKNTKSKEFSSEL--------KILCK--VHSNLIE 67
+G G+YGSV + K G+ AIK++ S+ F SE+ +L K H N+I
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKL----SRPFQSEIFAKRAYRELLLLKHMQHENVIG 105
Query: 68 LIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG--KKPLAWT---TRVQ-IALDAAKGL 121
L+ SL Y++ +L P ++ +K + ++Q + KGL
Sbjct: 106 LLDVFTPASSLRNFYDF--------YLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGL 157
Query: 122 EYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYL 181
+YIH VHRD+K N+ ++ + KI DFGL + H+ A + V T Y
Sbjct: 158 KYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR---HA---DAEMTGYVVTRWYR 208
Query: 182 APEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
APE + ++ D+++ G ++ E++TG+
Sbjct: 209 APEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKNT-----KSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 19 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG--KKPLAWTTRVQIAL 115
+ H N+I L+ SL E + L HL + K VQ +
Sbjct: 76 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLI 131
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR---HTDD---EMTGY 182
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 104/237 (43%), Gaps = 35/237 (14%)
Query: 7 VRDATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMKNTKSKEFS----SELKILCK 60
V + +S+F +G+G+YG V K G+ AIK+++ F+ E+KIL
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 61 V-HSNLIELIGYAAGG-----DSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIA 114
H N+I + + ++++ E Q LH V + L+
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTD-----LH--RVISTQMLSDDHIQYFI 118
Query: 115 LDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPE-------I 167
+ ++ +H +HRD+K SN+L++SN K+ DFGL ++++ S
Sbjct: 119 YQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 168 AAAASRIVGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRDANPGNN 223
+ + V T Y APE + +++ DV++ G +L EL L R PG +
Sbjct: 176 QSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF-----LRRPIFPGRD 227
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKNT-----KSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 25 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 82 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 137
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 138 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 188
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILLDSNFRA---KIADFGLVKLLEHSPEIAAAASRIV 175
+ + +IHQ+ VHRD+K N+LL S + K+ADFGL ++ + A
Sbjct: 141 ESVNHIHQHD---IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQ---AWFGFA 194
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITG 210
GT GYL+PE +R D++A GV+L L+ G
Sbjct: 195 GTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKNT-----KSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 19 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 76 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 182
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKN-----TKSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 19 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG--KKPLAWTTRVQIAL 115
+ H N+I L+ SL E + L HL + K VQ +
Sbjct: 76 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLI 131
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 182
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKNT-----KSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 15 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 72 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 127
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 128 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 178
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 26/205 (12%)
Query: 18 LKIGQGSYGSVYLGKLR----GKNAAIKQMKNT----KSKEFSSELKILCKVHSNLIELI 69
+++G+G+YG V K+R G+ A+K+++ T + K +L I + +
Sbjct: 13 MELGRGAYGVVE--KMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVT 70
Query: 70 GYAA---GGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ 126
Y A GD +++ E D + + + + +IA+ K LE++H
Sbjct: 71 FYGALFREGD-VWICMELMDTSL--DKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH- 126
Query: 127 YTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV 186
+K +HRDVK SN+L+++ + K+ DFG+ L A G Y+APE +
Sbjct: 127 -SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD----VAKDIDAGCKPYMAPERI 181
Query: 187 RDGC----VTTKSDVYAFGVVLMEL 207
+ KSD+++ G+ ++EL
Sbjct: 182 NPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 90/208 (43%), Gaps = 20/208 (9%)
Query: 11 TSNFSTSLKIGQGSYGSVY--LGKLRGKNAAIKQMKNTKSKEFSSELKILCKV--HSNLI 66
T + IG GSY + K A+K + +K ++ + E++IL + H N+I
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK-RDPTEEIEILLRYGQHPNII 79
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ 126
L G +++V E + G L D + +K + + K +EY+H
Sbjct: 80 TLKDVYDDGKYVYVVTELMKGGELLD-----KILRQKFFSEREASAVLFTITKTVEYLHA 134
Query: 127 YTKPYYVHRDVKTSNIL-LDSNFRA---KIADFGLVKLLEHSPEIAAAASRIVGTFGYLA 182
VHRD+K SNIL +D + +I DFG K L + T ++A
Sbjct: 135 QG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY---TANFVA 188
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITG 210
PE + D+++ GV+L ++TG
Sbjct: 189 PEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 133 VHRDVKTSNILLDSNFRA---KIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG 189
VHRD+K N+LL S + K+ADFGL +E + A GT GYL+PE +R
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ---AWFGFAGTPGYLSPEVLRKD 199
Query: 190 CVTTKSDVYAFGVVLMELITG 210
D++A GV+L L+ G
Sbjct: 200 PYGKPVDLWACGVILYILLVG 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 100/222 (45%), Gaps = 36/222 (16%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKNTKSKEFSS---------E 54
EV + N S +G G+YGSV G A+K++ SK F S E
Sbjct: 31 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKL----SKPFQSIIHAKRTYRE 83
Query: 55 LKILCKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RV 111
L++L + H N+I L+ SL E + L HL + T V
Sbjct: 84 LRLLKHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 139
Query: 112 QIAL-DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAA 170
Q + +GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ +
Sbjct: 140 QFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---E 190
Query: 171 ASRIVGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
+ V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 191 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKNT-----KSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 24 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 81 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 136
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 137 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR---HTDD---EMTGY 187
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 43/213 (20%)
Query: 20 IGQGSYGSV--YLGKLRGKNAAIKQM-KNTKSKEFSS----ELKILCKV-HSNLIELIGY 71
+G G+YG+V + G AIK++ + +S+ F+ EL++L + H N+I L+
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 72 AAGGDSL------FLVYEYAQN--GALSDHLHWPSVKGKKPLAWTTRVQ-IALDAAKGLE 122
++L +LV + G L H R+Q + KGL
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGE----------DRIQFLVYQMLKGLR 142
Query: 123 YIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVG---TFG 179
YIH +HRD+K N+ ++ + KI DFGL + A S + G T
Sbjct: 143 YIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR---------QADSEMXGXVVTRW 190
Query: 180 YLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
Y APE + + T++ D+++ G ++ E+ITG+
Sbjct: 191 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKN-----TKSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 24 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 81 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 136
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 137 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 187
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 32/220 (14%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKNT-----KSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 19 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPS----VKGKKPLAWTTRVQI 113
+ H N+I L+ SL E + L HL VK +K VQ
Sbjct: 76 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKSQK--LTDDHVQF 129
Query: 114 AL-DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAAS 172
+ +GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 130 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCR---HTDD---EMT 180
Query: 173 RIVGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKN-----TKSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 19 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 76 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 182
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKNT-----KSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 39 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 96 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 151
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 152 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 202
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKNT-----KSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 25 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 82 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 137
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 138 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 188
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKN-----TKSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 19 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 76 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGX 182
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 86/183 (46%), Gaps = 21/183 (11%)
Query: 41 KQMKNTKSKEFSS-ELKILCKVHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSV 99
KQ + +S+ F E+ C+ H N++ELI + D +LV+E + G++ H+H
Sbjct: 48 KQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIH--KR 105
Query: 100 KGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFR---AKIADFG 156
+ L + VQ D A L+++H HRD+K NIL + + KI DF
Sbjct: 106 RHFNELEASVVVQ---DVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFD 159
Query: 157 L---VKL-LEHSPEIAAAASRIVGTFGYLAPEYV-----RDGCVTTKSDVYAFGVVLMEL 207
L +KL + SP G+ Y+APE V + D+++ GV+L L
Sbjct: 160 LGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYIL 219
Query: 208 ITG 210
++G
Sbjct: 220 LSG 222
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKN-----TKSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 19 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 76 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 182
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKNT-----KSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 30 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 86
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 87 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 142
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 143 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR---HTDD---EMTGY 193
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKN-----TKSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 26 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 83 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 138
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 139 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 189
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKN-----TKSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 19 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 76 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 182
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKNT-----KSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 38 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 94
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 95 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 150
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 151 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 201
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKN-----TKSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 19 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 76 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 182
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKNT-----KSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 39 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 96 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 151
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ +
Sbjct: 152 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMXGX--- 202
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKN-----TKSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 19 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 76 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 182
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKN-----TKSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 19 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 76 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 182
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 95/226 (42%), Gaps = 17/226 (7%)
Query: 8 RDATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEF-SSELKILCKV----H 62
R F GQG++G+V LGK + ++ K + F + EL+I+ + H
Sbjct: 19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHH 78
Query: 63 SNLIELIG--YAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
N+++L Y G +Y + D LH + + I + +
Sbjct: 79 PNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQL 138
Query: 121 LEYIHQYTKPY--YVHRDVKTSNILL-DSNFRAKIADFGLVKLLEHS-PEIAAAASRIVG 176
+ I P HRD+K N+L+ +++ K+ DFG K L S P +A SR
Sbjct: 139 IRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY-- 196
Query: 177 TFGYLAPEYV-RDGCVTTKSDVYAFGVVLMELITGQQALSRDANPG 221
Y APE + + TT D+++ G + E++ G+ D + G
Sbjct: 197 ---YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAG 239
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKN-----TKSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 24 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 81 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 136
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 137 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 187
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKN-----TKSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 25 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 82 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 137
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 138 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 188
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKN-----TKSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 18 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 74
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 75 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 130
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 131 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 181
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 182 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKNT-----KSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 16 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 72
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 73 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 128
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 129 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 179
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 20/213 (9%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIK-QMKNTKSKEFSSELKILCK--VH 62
E R+ + L++G+GS+G V+ ++ K + +K + + F +E + C
Sbjct: 87 EYREEVHWATHQLRLGRGSFGEVH--RMEDKQTGFQCAVKKVRLEVFRAEELMACAGLTS 144
Query: 63 SNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLE 122
++ L G G + + E + G+L VK + L + A +GLE
Sbjct: 145 PRIVPLYGAVREGPWVNIFMELLEGGSLGQ-----LVKEQGCLPEDRALYYLGQALEGLE 199
Query: 123 YIHQYTKPYYVHRDVKTSNILLDSN-FRAKIADFGLVKLLEHSPEIAA----AASRIVGT 177
Y+H +H DVK N+LL S+ A + DFG L+ P+ I GT
Sbjct: 200 YLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQ--PDGLGKSLLTGDYIPGT 254
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELITG 210
++APE V K DV++ +++ ++ G
Sbjct: 255 ETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 20/213 (9%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIK-QMKNTKSKEFSSELKILCK--VH 62
E R+ + L++G+GS+G V+ ++ K + +K + + F +E + C
Sbjct: 68 EYREEVHWATHQLRLGRGSFGEVH--RMEDKQTGFQCAVKKVRLEVFRAEELMACAGLTS 125
Query: 63 SNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLE 122
++ L G G + + E + G+L VK + L + A +GLE
Sbjct: 126 PRIVPLYGAVREGPWVNIFMELLEGGSLGQ-----LVKEQGCLPEDRALYYLGQALEGLE 180
Query: 123 YIHQYTKPYYVHRDVKTSNILLDSN-FRAKIADFGLVKLLEHSPEIAA----AASRIVGT 177
Y+H +H DVK N+LL S+ A + DFG L+ P+ I GT
Sbjct: 181 YLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQ--PDGLGKDLLTGDYIPGT 235
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELITG 210
++APE V K DV++ +++ ++ G
Sbjct: 236 ETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKN-----TKSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 15 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 72 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 127
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 128 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 178
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKNT-----KSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 21 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 78 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 133
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 134 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 184
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKNT-----KSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 16 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 72
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 73 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 128
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 129 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 179
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKN-----TKSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 25 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 82 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 137
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 138 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR---HTDD---EMTGY 188
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKN-----TKSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 21 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 78 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 133
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 134 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 184
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKN-----TKSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 31 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 87
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 88 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 143
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 144 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 194
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKN-----TKSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 31 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 87
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 88 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 143
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 144 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 194
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKNT-----KSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 30 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 86
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 87 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 142
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 143 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 193
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKNT-----KSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 19 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 76 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 182
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKNT-----KSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 42 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 98
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 99 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 154
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 155 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 205
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKNT-----KSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 21 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 78 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 133
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 134 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 184
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKNT-----KSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 21 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 78 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 133
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 134 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR---HTDD---EMTGY 184
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKNT-----KSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 39 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 96 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 151
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 152 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 202
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKN-----TKSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 17 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 73
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 74 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 129
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 130 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 180
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 181 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKNT-----KSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 38 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 94
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 95 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 150
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 151 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGY 201
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 25/204 (12%)
Query: 20 IGQGSYGSV--YLGKLRGKNAAIKQMKNT-----KSKEFSSELKILCKV-HSNLIELIGY 71
+G G+YGSV G A+K++ +K EL++L + H N+I L+
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 72 AAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL-DAAKGLEYIHQYT 128
SL E + L HL + T VQ + +GL+YIH
Sbjct: 100 FTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 155
Query: 129 KPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRD 188
+HRD+K SN+ ++ + KI DFGL + H+ + + V T Y APE + +
Sbjct: 156 ---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMTGYVATRWYRAPEIMLN 206
Query: 189 GCVTTKS-DVYAFGVVLMELITGQ 211
++ D+++ G ++ EL+TG+
Sbjct: 207 WMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 95/234 (40%), Gaps = 46/234 (19%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQMKN-----TKSKEFSSELKILCKVHSN-LIELIGY 71
IG+GSYG VYL K KN AIK++ K E+ IL ++ S+ +I L
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDL 93
Query: 72 AAGGD-----SLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTR--VQIALDAAKGLEYI 124
D L++V E A + K P+ T I + G +I
Sbjct: 94 IIPDDLLKFDELYIVLEIADSDL--------KKLFKTPIFLTEEHIKTILYNLLLGENFI 145
Query: 125 HQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLE-------------------HSP 165
H+ +HRD+K +N LL+ + K+ DFGL + + H+
Sbjct: 146 HESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNK 202
Query: 166 EIAAAASRIVGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRDA 218
+ + V T Y APE + TKS D+++ G + EL+ Q+ D
Sbjct: 203 NLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDP 256
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIK-QMKNTKSKEFSSELKILCKVHSN 64
E R+ + ++G+GS+G V+ +++ K + +K + + F E + C S+
Sbjct: 68 EYREEVHWMTHQPRVGRGSFGEVH--RMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSS 125
Query: 65 --LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLE 122
++ L G G + + E + G+L +K L + A +GLE
Sbjct: 126 PRIVPLYGAVREGPWVNIFMELLEGGSLGQ-----LIKQMGCLPEDRALYYLGQALEGLE 180
Query: 123 YIHQYTKPYYVHRDVKTSNILLDSNF-RAKIADFGLVKLLEHSPEIAA----AASRIVGT 177
Y+H +H DVK N+LL S+ RA + DFG L+ P+ I GT
Sbjct: 181 YLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQ--PDGLGKSLLTGDYIPGT 235
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELITG 210
++APE V K D+++ +++ ++ G
Sbjct: 236 ETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 20/199 (10%)
Query: 20 IGQGSYGSVYLGKLRGKNA--AIKQMKNTKSKEFSSELKILCKV--HSNLIELIGYAAGG 75
IG GSY + N A+K + +K ++ S E++IL + H N+I L G
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSK-RDPSEEIEILLRYGQHPNIITLKDVYDDG 93
Query: 76 DSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHR 135
++LV E + G L D + ++ ++ K +EY+H VHR
Sbjct: 94 KHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT-----IGKTVEYLHSQG---VVHR 145
Query: 136 DVKTSNIL-LDSNFRA---KIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCV 191
D+K SNIL +D + +I DFG K L + T ++APE ++
Sbjct: 146 DLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY---TANFVAPEVLKRQGY 202
Query: 192 TTKSDVYAFGVVLMELITG 210
D+++ G++L ++ G
Sbjct: 203 DEGCDIWSLGILLYTMLAG 221
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 20/199 (10%)
Query: 20 IGQGSYGSVYLGKLRGKNA--AIKQMKNTKSKEFSSELKILCKV--HSNLIELIGYAAGG 75
IG GSY + N A+K + +K ++ S E++IL + H N+I L G
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSK-RDPSEEIEILLRYGQHPNIITLKDVYDDG 93
Query: 76 DSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHR 135
++LV E + G L D + ++ ++ K +EY+H VHR
Sbjct: 94 KHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT-----IGKTVEYLHSQG---VVHR 145
Query: 136 DVKTSNIL-LDSNFRA---KIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCV 191
D+K SNIL +D + +I DFG K L + T ++APE ++
Sbjct: 146 DLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY---TANFVAPEVLKRQGY 202
Query: 192 TTKSDVYAFGVVLMELITG 210
D+++ G++L ++ G
Sbjct: 203 DEGCDIWSLGILLYTMLAG 221
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 89/208 (42%), Gaps = 20/208 (9%)
Query: 11 TSNFSTSLKIGQGSYGSVY--LGKLRGKNAAIKQMKNTKSKEFSSELKILCKV--HSNLI 66
T + IG GSY + K A+K + +K ++ + E++IL + H N+I
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSK-RDPTEEIEILLRYGQHPNII 79
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ 126
L G +++V E + G L D + +K + + K +EY+H
Sbjct: 80 TLKDVYDDGKYVYVVTELXKGGELLD-----KILRQKFFSEREASAVLFTITKTVEYLHA 134
Query: 127 YTKPYYVHRDVKTSNIL-LDSNFRA---KIADFGLVKLLEHSPEIAAAASRIVGTFGYLA 182
VHRD+K SNIL +D + +I DFG K L + T ++A
Sbjct: 135 QG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY---TANFVA 188
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITG 210
PE + D+++ GV+L +TG
Sbjct: 189 PEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 101/255 (39%), Gaps = 59/255 (23%)
Query: 10 ATSNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQMKN-----TKSKEFSSELKILCKVH 62
N+ IG+GSYG VYL K KN AIK++ K E+ IL ++
Sbjct: 26 VPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLK 85
Query: 63 SNLI----------ELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTR-- 110
S+ I +L+ + D L++V E A + K P+ T +
Sbjct: 86 SDYIIRLHDLIIPEDLLKF----DELYIVLEIADSDL--------KKLFKTPIFLTEQHV 133
Query: 111 VQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLE-------- 162
I + G ++IH+ +HRD+K +N LL+ + KI DFGL + +
Sbjct: 134 KTILYNLLLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIV 190
Query: 163 --------------HSPEIAAAASRIVGTFGYLAPEYV-RDGCVTTKSDVYAFGVVLMEL 207
H+ + + V T Y APE + T D+++ G + EL
Sbjct: 191 NDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAEL 250
Query: 208 ITGQQALSRDANPGN 222
+ + S NP N
Sbjct: 251 LNMMK--SHINNPTN 263
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 133 VHRDVKTSNILLDSNFRA---KIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG 189
VHRD+K N+LL S + K+ADFGL ++ + A GT GYL+PE +R
Sbjct: 125 VHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQ---AWFGFAGTPGYLSPEVLRKE 181
Query: 190 CVTTKSDVYAFGVVLMELITG 210
D++A GV+L L+ G
Sbjct: 182 AYGKPVDIWACGVILYILLVG 202
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIK-QMKNTKSKEFSSELKILCKVHSN 64
E R+ + ++G+GS+G V+ +++ K + +K + + F E + C S+
Sbjct: 52 EYREEVHWMTHQPRVGRGSFGEVH--RMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSS 109
Query: 65 --LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLE 122
++ L G G + + E + G+L +K L + A +GLE
Sbjct: 110 PRIVPLYGAVREGPWVNIFMELLEGGSLGQ-----LIKQMGCLPEDRALYYLGQALEGLE 164
Query: 123 YIHQYTKPYYVHRDVKTSNILLDSNF-RAKIADFGLVKLLEHSPEIAA----AASRIVGT 177
Y+H +H DVK N+LL S+ RA + DFG L+ P+ I GT
Sbjct: 165 YLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQ--PDGLGKSLLTGDYIPGT 219
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELITG 210
++APE V K D+++ +++ ++ G
Sbjct: 220 ETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKN-----TKSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 42 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 98
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 99 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 154
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ +
Sbjct: 155 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMXG---Y 205
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 40/250 (16%)
Query: 13 NFSTSLK--------IGQGSYGSV-YLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV-- 61
NF SLK +G GS G+V + G +G+ A+K+M E+K+L +
Sbjct: 26 NFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDD 85
Query: 62 HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGK--KPLAWTTRVQIALDAAK 119
H N+I L++ E N L D + +V + K + + A
Sbjct: 86 HPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 120 GLEYIHQYTKPYYVHRDVKTSNILLDS-------------NFRAKIADFGLVKLLEHSP- 165
G+ ++H +HRD+K NIL+ + N R I+DFGL K L+
Sbjct: 145 GVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 201
Query: 166 EIAAAASRIVGTFGYLAPEYVRDGC---VTTKSDVYAFGVVLMELITGQQALSRDANPGN 222
+ GT G+ APE + + +T D+++ G V + LS+ +P
Sbjct: 202 XFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYI------LSKGKHPFG 255
Query: 223 NQYTEHRSLV 232
++Y+ +++
Sbjct: 256 DKYSRESNII 265
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 20/213 (9%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIK-QMKNTKSKEFSSELKILCKVHSN 64
E R+ + ++G+GS+G V+ +++ K + +K + + F E + C S+
Sbjct: 66 EYREEVHWMTHQPRLGRGSFGEVH--RMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSS 123
Query: 65 --LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLE 122
++ L G G + + E + G+L +K L + A +GLE
Sbjct: 124 PRIVPLYGAVREGPWVNIFMELLEGGSLGQ-----LIKQMGCLPEDRALYYLGQALEGLE 178
Query: 123 YIHQYTKPYYVHRDVKTSNILLDSNF-RAKIADFGLVKLLEHSPEIAA----AASRIVGT 177
Y+H +H DVK N+LL S+ RA + DFG L+ P+ I GT
Sbjct: 179 YLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQ--PDGLGKSLLTGDYIPGT 233
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELITG 210
++APE V K D+++ +++ ++ G
Sbjct: 234 ETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 30/207 (14%)
Query: 20 IGQGSYGSVYLGKLRGKNAA----IKQMKNTKSKEFSSELKILCKV-HSNLIELIGYAAG 74
IG+G +G VY G+ G+ A I++ + K F E+ + H N++ +G
Sbjct: 41 IGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS 100
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
L ++ + L + K L QIA + KG+ Y+H +H
Sbjct: 101 PPHLAIITSLCKGRTLYSVVR----DAKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILH 153
Query: 135 RDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAAS----RIV-GTFGYLAPEYVRDG 189
+D+K+ N+ D N + I DFGL + S + A RI G +LAPE +R
Sbjct: 154 KDLKSKNVFYD-NGKVVITDFGLFSI---SGVLQAGRREDKLRIQNGWLCHLAPEIIRQL 209
Query: 190 CVTTK---------SDVYAFGVVLMEL 207
T+ SDV+A G + EL
Sbjct: 210 SPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 40/250 (16%)
Query: 13 NFSTSLK--------IGQGSYGSV-YLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV-- 61
NF SLK +G GS G+V + G +G+ A+K+M E+K+L +
Sbjct: 26 NFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDD 85
Query: 62 HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGK--KPLAWTTRVQIALDAAK 119
H N+I L++ E N L D + +V + K + + A
Sbjct: 86 HPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 120 GLEYIHQYTKPYYVHRDVKTSNILLDS-------------NFRAKIADFGLVKLLEHSP- 165
G+ ++H +HRD+K NIL+ + N R I+DFGL K L+
Sbjct: 145 GVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 201
Query: 166 EIAAAASRIVGTFGYLAPEYVRDGC---VTTKSDVYAFGVVLMELITGQQALSRDANPGN 222
+ GT G+ APE + + +T D+++ G V + LS+ +P
Sbjct: 202 XFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYI------LSKGKHPFG 255
Query: 223 NQYTEHRSLV 232
++Y+ +++
Sbjct: 256 DKYSRESNII 265
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 133 VHRDVKTSNILLDSNFRA---KIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG 189
VHR++K N+LL S + K+ADFGL + S A GT GYL+PE ++
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS----EAWHGFAGTPGYLSPEVLKKD 182
Query: 190 CVTTKSDVYAFGVVLMELITG--------QQALSRDANPGNNQY---------TEHRSLV 232
+ D++A GV+L L+ G Q L G Y E +SL+
Sbjct: 183 PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLI 242
Query: 233 DYMLAV 238
D ML V
Sbjct: 243 DSMLTV 248
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 105/257 (40%), Gaps = 42/257 (16%)
Query: 11 TSNFSTSLKIGQGSYGSVY--LGKLRGKNAAIKQMKNTKS------KEFSSELKILCKV- 61
+ N+ ++G+G++ V + K G A K + NTK ++ E +I K+
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKII-NTKKLSARDFQKLEREARICRKLQ 62
Query: 62 HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGL 121
H N++ L +LV++ G L + + ++ + + +
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGELFE-----DIVAREFYSEADASHCIQQILESI 117
Query: 122 EYIHQYTKPYYVHRDVKTSNILLDSNFRA---KIADFGLVKLLEHSPEIAAAASRIVGTF 178
Y H VHR++K N+LL S + K+ADFGL + S A GT
Sbjct: 118 AYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS----EAWHGFAGTP 170
Query: 179 GYLAPEYVRDGCVTTKSDVYAFGVVLMELITG--------QQALSRDANPGNNQY----- 225
GYL+PE ++ + D++A GV+L L+ G Q L G Y
Sbjct: 171 GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEW 230
Query: 226 ----TEHRSLVDYMLAV 238
E +SL+D ML V
Sbjct: 231 DTVTPEAKSLIDSMLTV 247
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 105/257 (40%), Gaps = 42/257 (16%)
Query: 11 TSNFSTSLKIGQGSYGSVY--LGKLRGKNAAIKQMKNTKS------KEFSSELKILCKV- 61
+ N+ ++G+G++ V + K G A K + NTK ++ E +I K+
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKII-NTKKLSARDFQKLEREARICRKLQ 63
Query: 62 HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGL 121
H N++ L +LV++ G L + + ++ + + +
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFE-----DIVAREFYSEADASHCIQQILESI 118
Query: 122 EYIHQYTKPYYVHRDVKTSNILLDSNFRA---KIADFGLVKLLEHSPEIAAAASRIVGTF 178
Y H VHR++K N+LL S + K+ADFGL + S A GT
Sbjct: 119 AYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS----EAWHGFAGTP 171
Query: 179 GYLAPEYVRDGCVTTKSDVYAFGVVLMELITG--------QQALSRDANPGNNQY----- 225
GYL+PE ++ + D++A GV+L L+ G Q L G Y
Sbjct: 172 GYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEW 231
Query: 226 ----TEHRSLVDYMLAV 238
E +SL+D ML V
Sbjct: 232 DTVTPEAKSLIDSMLTV 248
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 108/255 (42%), Gaps = 35/255 (13%)
Query: 19 KIGQGSYGSVYLGKLR--GKNAAIKQM-------KNTKSKEFSSELKILCKVHSNLIELI 69
++G G++G V+ R G N A K + K T KE + + +L H L+ L
Sbjct: 58 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQT-MSVLR--HPTLVNLH 114
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTK 129
+ + ++YE+ G L + + ++ V+ KGL ++H+
Sbjct: 115 DAFEDDNEMVMIYEFMSGGELFEKV----ADEHNKMSEDEAVEYMRQVCKGLCHMHENN- 169
Query: 130 PYYVHRDVKTSNILLDS--NFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVR 187
YVH D+K NI+ + + K+ DFGL L+ + GT + APE
Sbjct: 170 --YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT----TGTAEFAAPEVAE 223
Query: 188 DGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYML------AVFND 241
V +D+++ GV+ L++G LS +++ + D+ + + D
Sbjct: 224 GKPVGYYTDMWSVGVLSYILLSG---LSPFGGENDDETLRNVKSCDWNMDDSAFSGISED 280
Query: 242 TKDFMAKLTECLDPN 256
KDF+ KL DPN
Sbjct: 281 GKDFIRKLL-LADPN 294
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 107/266 (40%), Gaps = 42/266 (15%)
Query: 2 FSYNEVRDATSNFSTSLKIGQGSYGSVY--LGKLRGKNAAIKQMKNTKS------KEFSS 53
F N + N+ ++G+G++ V + K G A K + NTK ++
Sbjct: 19 FMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKII-NTKKLSARDFQKLER 77
Query: 54 ELKILCKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQ 112
E +I K+ H N++ L +LV++ G L + + ++ +
Sbjct: 78 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL-----FEDIVAREFYSEADASH 132
Query: 113 IALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRA---KIADFGLVKLLEHSPEIAA 169
+ + Y H VHR++K N+LL S + K+ADFGL + S
Sbjct: 133 CIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS----E 185
Query: 170 AASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITG--------QQALSRDANPG 221
A GT GYL+PE ++ + D++A GV+L L+ G Q L G
Sbjct: 186 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 245
Query: 222 NNQY---------TEHRSLVDYMLAV 238
Y E +SL+D ML V
Sbjct: 246 AYDYPSPEWDTVTPEAKSLIDSMLTV 271
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 108/255 (42%), Gaps = 35/255 (13%)
Query: 19 KIGQGSYGSVYLGKLR--GKNAAIKQM-------KNTKSKEFSSELKILCKVHSNLIELI 69
++G G++G V+ R G N A K + K T KE + + +L H L+ L
Sbjct: 164 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQT-MSVL--RHPTLVNLH 220
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTK 129
+ + ++YE+ G L + + ++ V+ KGL ++H+
Sbjct: 221 DAFEDDNEMVMIYEFMSGGELFEKV----ADEHNKMSEDEAVEYMRQVCKGLCHMHENN- 275
Query: 130 PYYVHRDVKTSNILLDS--NFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVR 187
YVH D+K NI+ + + K+ DFGL L+ + GT + APE
Sbjct: 276 --YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT----TGTAEFAAPEVAE 329
Query: 188 DGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYML------AVFND 241
V +D+++ GV+ L++G LS +++ + D+ + + D
Sbjct: 330 GKPVGYYTDMWSVGVLSYILLSG---LSPFGGENDDETLRNVKSCDWNMDDSAFSGISED 386
Query: 242 TKDFMAKLTECLDPN 256
KDF+ KL DPN
Sbjct: 387 GKDFIRKLL-LADPN 400
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 94/223 (42%), Gaps = 26/223 (11%)
Query: 20 IGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKIL---CKVHSNLIELIGYAAG 74
IG G++G L + + N A+K ++ + + + + +I+ H N++
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
L +V EYA G L + + + + + I+ G+ Y H H
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-----GVSYCHAMQ---VCH 138
Query: 135 RDVKTSNILLDSNF--RAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV----RD 188
RD+K N LLD + R KI FG K S + + VGT Y+APE + D
Sbjct: 139 RDLKLENTLLDGSPAPRLKICAFGYSK----SSVLHSQPKSTVGTPAYIAPEVLLKKEYD 194
Query: 189 GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSL 231
G V +DV++ GV L ++ G P N + T HR L
Sbjct: 195 GKV---ADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKN-----TKSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 19 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 76 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI D+GL + H+ + +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLAR---HTDD---EMTGY 182
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 94/223 (42%), Gaps = 26/223 (11%)
Query: 20 IGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSSELKIL---CKVHSNLIELIGYAAG 74
IG G++G L + + N A+K ++ + + + + +I+ H N++
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVH 134
L +V EYA G L + + + + + I+ G+ Y H H
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-----GVSYCHAMQ---VCH 138
Query: 135 RDVKTSNILLDSNF--RAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV----RD 188
RD+K N LLD + R KI FG K S + + VGT Y+APE + D
Sbjct: 139 RDLKLENTLLDGSPAPRLKICAFGYSK----SSVLHSQPKDTVGTPAYIAPEVLLKKEYD 194
Query: 189 GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSL 231
G V +DV++ GV L ++ G P N + T HR L
Sbjct: 195 GKV---ADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 99/220 (45%), Gaps = 31/220 (14%)
Query: 7 VRDATSNFSTSLKIGQGSYGSV---YLGKLRGKNAAIKQMKNT-----KSKEFSSELKIL 58
+ + + T +G G+YGSV Y K G A+K++ +K EL++L
Sbjct: 46 IWEVPERYQTLSPVGSGAYGSVCSSYDVK-SGLKIAVKKLSRPFQSIIHAKRTYRELRLL 104
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPS----VKGKKPLAWTTRVQI 113
+ H N+I L+ SL E + L HL VK +K VQ
Sbjct: 105 KHMKHENVIGLLDVFTPATSL----EEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQF 158
Query: 114 AL-DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAAS 172
+ +GL+YIH +HRD+K SN+ ++ + KI DFGL + H+ + +
Sbjct: 159 LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR---HTDD---EMT 209
Query: 173 RIVGTFGYLAPEYVRDGC-VTTKSDVYAFGVVLMELITGQ 211
V T Y APE + + D+++ G ++ EL+TG+
Sbjct: 210 GYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSS---------ELKILCK 60
S + +G G +GSVY G N AIK ++ + ++ E+ +L K
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 61 V---HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG--KKPLAWTTRVQIAL 115
V S +I L+ + DS L+ E + + D + + +G ++ LA + Q+
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPE--PVQDLFDFITERGALQEELARSFFWQV-- 119
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF-RAKIADFGLVKLLEHSPEIAAAASRI 174
LE + +HRD+K NIL+D N K+ DFG LL+ + +
Sbjct: 120 -----LEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDF 169
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRD 217
GT Y PE++R +S V++ G++L +++ G D
Sbjct: 170 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 213
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 133 VHRDVKTSNILLDSNFRA---KIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG 189
VHR++K N+LL S + K+ADFGL +E + A GT GYL+PE +R
Sbjct: 132 VHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ---AWFGFAGTPGYLSPEVLRKD 188
Query: 190 CVTTKSDVYAFGVVLMELITG 210
D++A GV+L L+ G
Sbjct: 189 PYGKPVDLWACGVILYILLVG 209
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 90/219 (41%), Gaps = 36/219 (16%)
Query: 20 IGQGSYGSVYLG-----------KLRGKNAAIKQMKNTKSKEFSSELKILCKV-----HS 63
+G+G +G+V+ G K+ +N + + S E+ +L KV H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 64 NLIELIGYAAGGDSLFLVYEY---AQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKG 120
+I L+ + + LV E AQ+ L D+ + K PL
Sbjct: 99 GVIRLLDWFETQEGFMLVLERPLPAQD--LFDY-----ITEKGPLGEGPSRCFFGQVVAA 151
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLD-SNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFG 179
+++ H VHRD+K NIL+D AK+ DFG LL P +R+
Sbjct: 152 IQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRV----- 203
Query: 180 YLAPEYV-RDGCVTTKSDVYAFGVVLMELITGQQALSRD 217
Y PE++ R + V++ G++L +++ G RD
Sbjct: 204 YSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD 242
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSS---------ELKILCK 60
S + +G G +GSVY G N AIK ++ + ++ E+ +L K
Sbjct: 7 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 66
Query: 61 V---HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG--KKPLAWTTRVQIAL 115
V S +I L+ + DS L+ E + + D + + +G ++ LA + Q+
Sbjct: 67 VSSGFSGVIRLLDWFERPDSFVLILERPE--PVQDLFDFITERGALQEELARSFFWQV-- 122
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF-RAKIADFGLVKLLEHSPEIAAAASRI 174
LE + +HRD+K NIL+D N K+ DFG LL+ + +
Sbjct: 123 -----LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDF 172
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRD 217
GT Y PE++R +S V++ G++L +++ G D
Sbjct: 173 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 216
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSS---------ELKILCK 60
S + +G G +GSVY G N AIK ++ + ++ E+ +L K
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 61 V---HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG--KKPLAWTTRVQIAL 115
V S +I L+ + DS L+ E + + D + + +G ++ LA + Q+
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILERPE--PVQDLFDFITERGALQEELARSFFWQV-- 124
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF-RAKIADFGLVKLLEHSPEIAAAASRI 174
LE + +HRD+K NIL+D N K+ DFG LL+ + +
Sbjct: 125 -----LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDF 174
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRD 217
GT Y PE++R +S V++ G++L +++ G D
Sbjct: 175 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 218
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSS---------ELKILCK 60
S + +G G +GSVY G N AIK ++ + ++ E+ +L K
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 67
Query: 61 V---HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG--KKPLAWTTRVQIAL 115
V S +I L+ + DS L+ E + + D + + +G ++ LA + Q+
Sbjct: 68 VSSGFSGVIRLLDWFERPDSFVLILERPE--PVQDLFDFITERGALQEELARSFFWQV-- 123
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF-RAKIADFGLVKLLEHSPEIAAAASRI 174
LE + +HRD+K NIL+D N K+ DFG LL+ + +
Sbjct: 124 -----LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDF 173
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRD 217
GT Y PE++R +S V++ G++L +++ G D
Sbjct: 174 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 217
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSS---------ELKILCK 60
S + +G G +GSVY G N AIK ++ + ++ E+ +L K
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 82
Query: 61 V---HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG--KKPLAWTTRVQIAL 115
V S +I L+ + DS L+ E + + D + + +G ++ LA + Q+
Sbjct: 83 VSSGFSGVIRLLDWFERPDSFVLILERPE--PVQDLFDFITERGALQEELARSFFWQV-- 138
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF-RAKIADFGLVKLLEHSPEIAAAASRI 174
LE + +HRD+K NIL+D N K+ DFG LL+ + +
Sbjct: 139 -----LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDF 188
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRD 217
GT Y PE++R +S V++ G++L +++ G D
Sbjct: 189 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 232
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSS---------ELKILCK 60
S + +G G +GSVY G N AIK ++ + ++ E+ +L K
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 61 V---HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG--KKPLAWTTRVQIAL 115
V S +I L+ + DS L+ E + + D + + +G ++ LA + Q+
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPE--PVQDLFDFITERGALQEELARSFFWQV-- 119
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF-RAKIADFGLVKLLEHSPEIAAAASRI 174
LE + +HRD+K NIL+D N K+ DFG LL+ + +
Sbjct: 120 -----LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDF 169
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRD 217
GT Y PE++R +S V++ G++L +++ G D
Sbjct: 170 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 213
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 105/256 (41%), Gaps = 40/256 (15%)
Query: 13 NFSTSLKIGQGSYGS-VYLGKLRGKNAAIKQMKNTKSKEFSSELKIL--CKVHSNLIELI 69
+F +G G+ G+ VY G ++ A+K++ E+++L H N+I
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYF 84
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVK--GKKPLAWTTRVQIALDAAKGLEYIHQY 127
++ E L +++ G +P+ + GL ++H
Sbjct: 85 CTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQ------TTSGLAHLHSL 137
Query: 128 TKPYYVHRDVKTSNILLD-----SNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLA 182
VHRD+K NIL+ +A I+DFGL K L + S + GT G++A
Sbjct: 138 N---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIA 194
Query: 183 PEYVRDGC---VTTKSDVYAFGVVLMELITG-----QQALSRDAN------------PGN 222
PE + + C T D+++ G V +I+ ++L R AN P
Sbjct: 195 PEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEK 254
Query: 223 NQYTEHRSLVDYMLAV 238
++ R L++ M+A+
Sbjct: 255 HEDVIARELIEKMIAM 270
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSS---------ELKILCK 60
S + +G G +GSVY G N AIK ++ + ++ E+ +L K
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 61 V---HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG--KKPLAWTTRVQIAL 115
V S +I L+ + DS L+ E + + D + + +G ++ LA + Q+
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPE--PVQDLFDFITERGALQEELARSFFWQV-- 152
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF-RAKIADFGLVKLLEHSPEIAAAASRI 174
LE + +HRD+K NIL+D N K+ DFG LL+ + +
Sbjct: 153 -----LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDF 202
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRD 217
GT Y PE++R +S V++ G++L +++ G D
Sbjct: 203 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 246
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSS---------ELKILCK 60
S + +G G +GSVY G N AIK ++ + ++ E+ +L K
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 61 V---HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG--KKPLAWTTRVQIAL 115
V S +I L+ + DS L+ E + + D + + +G ++ LA + Q+
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPE--PVQDLFDFITERGALQEELARSFFWQV-- 151
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF-RAKIADFGLVKLLEHSPEIAAAASRI 174
LE + +HRD+K NIL+D N K+ DFG LL+ + +
Sbjct: 152 -----LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDF 201
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRD 217
GT Y PE++R +S V++ G++L +++ G D
Sbjct: 202 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 245
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSS---------ELKILCK 60
S + +G G +GSVY G N AIK ++ + ++ E+ +L K
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 61 V---HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG--KKPLAWTTRVQIAL 115
V S +I L+ + DS L+ E + + D + + +G ++ LA + Q+
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILERPE--PVQDLFDFITERGALQEELARSFFWQV-- 124
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF-RAKIADFGLVKLLEHSPEIAAAASRI 174
LE + +HRD+K NIL+D N K+ DFG LL+ + +
Sbjct: 125 -----LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDF 174
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRD 217
GT Y PE++R +S V++ G++L +++ G D
Sbjct: 175 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 218
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 105/254 (41%), Gaps = 44/254 (17%)
Query: 13 NFSTSLK--------IGQGSYGSV-YLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV-- 61
NF SLK +G GS G+V + G +G+ A+K+M E+K+L +
Sbjct: 8 NFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDD 67
Query: 62 HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGK--KPLAWTTRVQIALDAAK 119
H N+I L++ E N L D + +V + K + + A
Sbjct: 68 HPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 120 GLEYIHQYTKPYYVHRDVKTSNILLDS-------------NFRAKIADFGLVKLLEH-SP 165
G+ ++H +HRD+K NIL+ + N R I+DFGL K L+
Sbjct: 127 GVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQS 183
Query: 166 EIAAAASRIVGTFGYLAPEYVRDGC-------VTTKSDVYAFGVVLMELITGQQALSRDA 218
+ GT G+ APE + + +T D+++ G V + LS+
Sbjct: 184 SFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYI------LSKGK 237
Query: 219 NPGNNQYTEHRSLV 232
+P ++Y+ +++
Sbjct: 238 HPFGDKYSRESNII 251
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSS---------ELKILCK 60
S + +G G +GSVY G N AIK ++ + ++ E+ +L K
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 82
Query: 61 V---HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG--KKPLAWTTRVQIAL 115
V S +I L+ + DS L+ E + + D + + +G ++ LA + Q+
Sbjct: 83 VSSGFSGVIRLLDWFERPDSFVLILERPE--PVQDLFDFITERGALQEELARSFFWQV-- 138
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF-RAKIADFGLVKLLEHSPEIAAAASRI 174
LE + +HRD+K NIL+D N K+ DFG LL+ + +
Sbjct: 139 -----LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDF 188
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRD 217
GT Y PE++R +S V++ G++L +++ G D
Sbjct: 189 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 232
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSS---------ELKILCK 60
S + +G G +GSVY G N AIK ++ + ++ E+ +L K
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 61 V---HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG--KKPLAWTTRVQIAL 115
V S +I L+ + DS L+ E + + D + + +G ++ LA + Q+
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILERPE--PVQDLFDFITERGALQEELARSFFWQV-- 139
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF-RAKIADFGLVKLLEHSPEIAAAASRI 174
LE + +HRD+K NIL+D N K+ DFG LL+ + +
Sbjct: 140 -----LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDF 189
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRD 217
GT Y PE++R +S V++ G++L +++ G D
Sbjct: 190 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 133 VHRDVKTSNILLDSNFRA---KIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG 189
VHRD+K N+LL S + K+ADFGL ++ + A GT GYL+PE +R
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ---AWFGFAGTPGYLSPEVLRKD 181
Query: 190 CVTTKSDVYAFGVVLMELITG 210
D++A GV+L L+ G
Sbjct: 182 PYGKPVDMWACGVILYILLVG 202
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSS---------ELKILCK 60
S + +G G +GSVY G N AIK ++ + ++ E+ +L K
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 61 V---HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG--KKPLAWTTRVQIAL 115
V S +I L+ + DS L+ E + + D + + +G ++ LA + Q+
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLILERPE--PVQDLFDFITERGALQEELARSFFWQV-- 119
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF-RAKIADFGLVKLLEHSPEIAAAASRI 174
LE + +HRD+K NIL+D N K+ DFG LL+ + +
Sbjct: 120 -----LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDF 169
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRD 217
GT Y PE++R +S V++ G++L +++ G D
Sbjct: 170 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 213
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSS---------ELKILCK 60
S + +G G +GSVY G N AIK ++ + ++ E+ +L K
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 110
Query: 61 V---HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG--KKPLAWTTRVQIAL 115
V S +I L+ + DS L+ E + + D + + +G ++ LA + Q+
Sbjct: 111 VSSGFSGVIRLLDWFERPDSFVLILERPE--PVQDLFDFITERGALQEELARSFFWQV-- 166
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF-RAKIADFGLVKLLEHSPEIAAAASRI 174
LE + +HRD+K NIL+D N K+ DFG LL+ + +
Sbjct: 167 -----LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDF 216
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRD 217
GT Y PE++R +S V++ G++L +++ G D
Sbjct: 217 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 260
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSS---------ELKILCK 60
S + +G G +GSVY G N AIK ++ + ++ E+ +L K
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 61 V---HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG--KKPLAWTTRVQIAL 115
V S +I L+ + DS L+ E + + D + + +G ++ LA + Q+
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILERPE--PVQDLFDFITERGALQEELARSFFWQV-- 139
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF-RAKIADFGLVKLLEHSPEIAAAASRI 174
LE + +HRD+K NIL+D N K+ DFG LL+ + +
Sbjct: 140 -----LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDF 189
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRD 217
GT Y PE++R +S V++ G++L +++ G D
Sbjct: 190 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSS---------ELKILCK 60
S + +G G +GSVY G N AIK ++ + ++ E+ +L K
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 61 V---HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG--KKPLAWTTRVQIAL 115
V S +I L+ + DS L+ E + + D + + +G ++ LA + Q+
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPE--PVQDLFDFITERGALQEELARSFFWQV-- 152
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF-RAKIADFGLVKLLEHSPEIAAAASRI 174
LE + +HRD+K NIL+D N K+ DFG LL+ + +
Sbjct: 153 -----LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDF 202
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRD 217
GT Y PE++R +S V++ G++L +++ G D
Sbjct: 203 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 246
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSS---------ELKILCK 60
S + +G G +GSVY G N AIK ++ + ++ E+ +L K
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 61 V---HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG--KKPLAWTTRVQIAL 115
V S +I L+ + DS L+ E + + D + + +G ++ LA + Q+
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPE--PVQDLFDFITERGALQEELARSFFWQV-- 151
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF-RAKIADFGLVKLLEHSPEIAAAASRI 174
LE + +HRD+K NIL+D N K+ DFG LL+ + +
Sbjct: 152 -----LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDF 201
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRD 217
GT Y PE++R +S V++ G++L +++ G D
Sbjct: 202 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 245
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSS---------ELKILCK 60
S + +G G +GSVY G N AIK ++ + ++ E+ +L K
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 61 V---HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG--KKPLAWTTRVQIAL 115
V S +I L+ + DS L+ E + + D + + +G ++ LA + Q+
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPE--PVQDLFDFITERGALQEELARSFFWQV-- 151
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF-RAKIADFGLVKLLEHSPEIAAAASRI 174
LE + +HRD+K NIL+D N K+ DFG LL+ + +
Sbjct: 152 -----LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDF 201
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRD 217
GT Y PE++R +S V++ G++L +++ G D
Sbjct: 202 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 245
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSS---------ELKILCK 60
S + +G G +GSVY G N AIK ++ + ++ E+ +L K
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 61 V---HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG--KKPLAWTTRVQIAL 115
V S +I L+ + DS L+ E + + D + + +G ++ LA + Q+
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPE--PVQDLFDFITERGALQEELARSFFWQV-- 152
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF-RAKIADFGLVKLLEHSPEIAAAASRI 174
LE + +HRD+K NIL+D N K+ DFG LL+ + +
Sbjct: 153 -----LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDF 202
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRD 217
GT Y PE++R +S V++ G++L +++ G D
Sbjct: 203 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 246
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSS---------ELKILCK 60
S + +G G +GSVY G N AIK ++ + ++ E+ +L K
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 61 V---HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG--KKPLAWTTRVQIAL 115
V S +I L+ + DS L+ E + + D + + +G ++ LA + Q+
Sbjct: 96 VSSGFSGVIRLLDWFERPDSFVLILERPE--PVQDLFDFITERGALQEELARSFFWQV-- 151
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF-RAKIADFGLVKLLEHSPEIAAAASRI 174
LE + +HRD+K NIL+D N K+ DFG LL+ + +
Sbjct: 152 -----LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDF 201
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRD 217
GT Y PE++R +S V++ G++L +++ G D
Sbjct: 202 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 245
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSS---------ELKILCK 60
S + +G G +GSVY G N AIK ++ + ++ E+ +L K
Sbjct: 43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 102
Query: 61 V---HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG--KKPLAWTTRVQIAL 115
V S +I L+ + DS L+ E + + D + + +G ++ LA + Q+
Sbjct: 103 VSSGFSGVIRLLDWFERPDSFVLILERPE--PVQDLFDFITERGALQEELARSFFWQV-- 158
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF-RAKIADFGLVKLLEHSPEIAAAASRI 174
LE + +HRD+K NIL+D N K+ DFG LL+ + +
Sbjct: 159 -----LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDF 208
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRD 217
GT Y PE++R +S V++ G++L +++ G D
Sbjct: 209 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 252
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSS---------ELKILCK 60
S + +G G +GSVY G N AIK ++ + ++ E+ +L K
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 61 V---HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG--KKPLAWTTRVQIAL 115
V S +I L+ + DS L+ E + + D + + +G ++ LA + Q+
Sbjct: 97 VSSGFSGVIRLLDWFERPDSFVLILERPE--PVQDLFDFITERGALQEELARSFFWQV-- 152
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF-RAKIADFGLVKLLEHSPEIAAAASRI 174
LE + +HRD+K NIL+D N K+ DFG LL+ + +
Sbjct: 153 -----LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDF 202
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRD 217
GT Y PE++R +S V++ G++L +++ G D
Sbjct: 203 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 246
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSS---------ELKILCK 60
S + +G G +GSVY G N AIK ++ + ++ E+ +L K
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 61 V---HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG--KKPLAWTTRVQIAL 115
V S +I L+ + DS L+ E + + D + + +G ++ LA + Q+
Sbjct: 84 VSSGFSGVIRLLDWFERPDSFVLILERPE--PVQDLFDFITERGALQEELARSFFWQV-- 139
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF-RAKIADFGLVKLLEHSPEIAAAASRI 174
LE + +HRD+K NIL+D N K+ DFG LL+ + +
Sbjct: 140 -----LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDF 189
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRD 217
GT Y PE++R +S V++ G++L +++ G D
Sbjct: 190 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 133 VHRDVKTSNILLDSNFRA---KIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG 189
VHRD+K N+LL S + K+ADFGL ++ + A GT GYL+PE +R
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ---AWFGFAGTPGYLSPEVLRKD 181
Query: 190 CVTTKSDVYAFGVVLMELITG 210
D++A GV+L L+ G
Sbjct: 182 PYGKPVDMWACGVILYILLVG 202
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 116/287 (40%), Gaps = 41/287 (14%)
Query: 20 IGQGSYGSVYLGKLRG--KNAAIKQMKNTK-----------SKEFSSELKILCKVHSNLI 66
+G G+ G V L R K AIK + K + +E++IL K++ I
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ 126
I + ++V E + G L D V G K L T ++Y+H+
Sbjct: 78 IKIKNFFDAEDYYIVLELMEGGELFD-----KVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 127 YTKPYYVHRDVKTSNILLDS---NFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
+HRD+K N+LL S + KI DFG K+L + + + GT YLAP
Sbjct: 133 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET----SLMRTLCGTPTYLAP 185
Query: 184 EY---VRDGCVTTKSDVYAFGVVLMELITGQQALS--RDANPGNNQYT--EHRSLVDYML 236
E V D ++ GV+L ++G S R +Q T ++ + +
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
Query: 237 AVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRR 283
V D + KL +DP R+ + L+ L DE+ KR+
Sbjct: 246 EVSEKALDLVKKLL-VVDPK-ARFTTEEALRHPWLQ----DEDMKRK 286
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSS---------ELKILCK 60
S + +G G +GSVY G N AIK ++ + ++ E+ +L K
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 110
Query: 61 V---HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG--KKPLAWTTRVQIAL 115
V S +I L+ + DS L+ E + + D + + +G ++ LA + Q+
Sbjct: 111 VSSGFSGVIRLLDWFERPDSFVLILERPE--PVQDLFDFITERGALQEELARSFFWQV-- 166
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF-RAKIADFGLVKLLEHSPEIAAAASRI 174
LE + +HRD+K NIL+D N K+ DFG LL+ + +
Sbjct: 167 -----LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDF 216
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRD 217
GT Y PE++R +S V++ G++L +++ G D
Sbjct: 217 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 260
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSS---------ELKILCK 60
S + +G G +GSVY G N AIK ++ + ++ E+ +L K
Sbjct: 31 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 90
Query: 61 V---HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG--KKPLAWTTRVQIAL 115
V S +I L+ + DS L+ E + + D + + +G ++ LA + Q+
Sbjct: 91 VSSGFSGVIRLLDWFERPDSFVLILERPE--PVQDLFDFITERGALQEELARSFFWQV-- 146
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF-RAKIADFGLVKLLEHSPEIAAAASRI 174
LE + +HRD+K NIL+D N K+ DFG LL+ + +
Sbjct: 147 -----LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDF 196
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRD 217
GT Y PE++R +S V++ G++L +++ G D
Sbjct: 197 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 240
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSS---------ELKILCK 60
S + +G G +GSVY G N AIK ++ + ++ E+ +L K
Sbjct: 56 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 115
Query: 61 V---HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG--KKPLAWTTRVQIAL 115
V S +I L+ + DS L+ E + + D + + +G ++ LA + Q+
Sbjct: 116 VSSGFSGVIRLLDWFERPDSFVLILERPE--PVQDLFDFITERGALQEELARSFFWQV-- 171
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF-RAKIADFGLVKLLEHSPEIAAAASRI 174
LE + +HRD+K NIL+D N K+ DFG LL+ + +
Sbjct: 172 -----LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDF 221
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRD 217
GT Y PE++R +S V++ G++L +++ G D
Sbjct: 222 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 265
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSS---------ELKILCK 60
S + +G G +GSVY G N AIK ++ + ++ E+ +L K
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 61 V---HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG--KKPLAWTTRVQIAL 115
V S +I L+ + DS L+ E + + D + + +G ++ LA + Q+
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLILERPE--PVQDLFDFITERGALQEELARSFFWQV-- 124
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF-RAKIADFGLVKLLEHSPEIAAAASRI 174
LE + +HRD+K NIL+D N K+ DFG LL+ + +
Sbjct: 125 -----LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDF 174
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRD 217
GT Y PE++R +S V++ G++L +++ G D
Sbjct: 175 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 218
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 116/287 (40%), Gaps = 41/287 (14%)
Query: 20 IGQGSYGSVYLGKLRG--KNAAIKQMKNTK-----------SKEFSSELKILCKVHSNLI 66
+G G+ G V L R K AIK + K + +E++IL K++ I
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ 126
I + ++V E + G L D V G K L T ++Y+H+
Sbjct: 78 IKIKNFFDAEDYYIVLELMEGGELFD-----KVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 127 YTKPYYVHRDVKTSNILLDS---NFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
+HRD+K N+LL S + KI DFG K+L + + + GT YLAP
Sbjct: 133 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET----SLMRTLCGTPTYLAP 185
Query: 184 EY---VRDGCVTTKSDVYAFGVVLMELITGQQALS--RDANPGNNQYT--EHRSLVDYML 236
E V D ++ GV+L ++G S R +Q T ++ + +
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
Query: 237 AVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRR 283
V D + KL +DP R+ + L+ L DE+ KR+
Sbjct: 246 EVSEKALDLVKKLL-VVDPK-ARFTTEEALRHPWLQ----DEDMKRK 286
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 116/287 (40%), Gaps = 41/287 (14%)
Query: 20 IGQGSYGSVYLGKLRG--KNAAIKQMKNTK-----------SKEFSSELKILCKVHSNLI 66
+G G+ G V L R K AIK + K + +E++IL K++ I
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ 126
I + ++V E + G L D V G K L T ++Y+H+
Sbjct: 78 IKIKNFFDAEDYYIVLELMEGGELFD-----KVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 127 YTKPYYVHRDVKTSNILLDS---NFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
+HRD+K N+LL S + KI DFG K+L + + + GT YLAP
Sbjct: 133 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET----SLMRTLCGTPTYLAP 185
Query: 184 EY---VRDGCVTTKSDVYAFGVVLMELITGQQALS--RDANPGNNQYT--EHRSLVDYML 236
E V D ++ GV+L ++G S R +Q T ++ + +
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
Query: 237 AVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRR 283
V D + KL +DP R+ + L+ L DE+ KR+
Sbjct: 246 EVSEKALDLVKKLL-VVDPK-ARFTTEEALRHPWLQ----DEDMKRK 286
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 134 HRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTT 193
HRDVK NIL+ ++ A + DFG+ + E VGT Y APE + T
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASAT--TDEKLTQLGNTVGTLYYXAPERFSESHATY 214
Query: 194 KSDVYAFGVVLMELITG 210
++D+YA VL E +TG
Sbjct: 215 RADIYALTCVLYECLTG 231
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 12 SNFSTSLKIGQGSYGSVYLGKLRGKN--AAIKQMKNTKSKEFSS---------ELKILCK 60
S + +G G +GSVY G N AIK ++ + ++ E+ +L K
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 67
Query: 61 V---HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG--KKPLAWTTRVQIAL 115
V S +I L+ + DS L+ E + + D + + +G ++ LA + Q+
Sbjct: 68 VSSGFSGVIRLLDWFERPDSFVLILERME--PVQDLFDFITERGALQEELARSFFWQV-- 123
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF-RAKIADFGLVKLLEHSPEIAAAASRI 174
LE + +HRD+K NIL+D N K+ DFG LL+ + +
Sbjct: 124 -----LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----VYTDF 173
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRD 217
GT Y PE++R +S V++ G++L +++ G D
Sbjct: 174 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 217
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 116/287 (40%), Gaps = 41/287 (14%)
Query: 20 IGQGSYGSVYLGKLRG--KNAAIKQMKNTK-----------SKEFSSELKILCKVHSNLI 66
+G G+ G V L R K AIK + K + +E++IL K++ I
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 76
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ 126
I + ++V E + G L D V G K L T ++Y+H+
Sbjct: 77 IKIKNFFDAEDYYIVLELMEGGELFD-----KVVGNKRLKEATCKLYFYQMLLAVQYLHE 131
Query: 127 YTKPYYVHRDVKTSNILLDS---NFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
+HRD+K N+LL S + KI DFG K+L + + + GT YLAP
Sbjct: 132 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET----SLMRTLCGTPTYLAP 184
Query: 184 EY---VRDGCVTTKSDVYAFGVVLMELITGQQALS--RDANPGNNQYT--EHRSLVDYML 236
E V D ++ GV+L ++G S R +Q T ++ + +
Sbjct: 185 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 244
Query: 237 AVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRR 283
V D + KL +DP R+ + L+ L DE+ KR+
Sbjct: 245 EVSEKALDLVKKLL-VVDPK-ARFTTEEALRHPWLQ----DEDMKRK 285
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 94/235 (40%), Gaps = 42/235 (17%)
Query: 17 SLKIGQGSYGSVYLGKLRG--KNAAIKQMKNTK-----------SKEFSSELKILCKVHS 63
S +G G+ G V L R K AI+ + K + +E++IL K++
Sbjct: 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH 199
Query: 64 NLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEY 123
I I + ++V E + G L D V G K L T ++Y
Sbjct: 200 PCIIKIKNFFDAEDYYIVLELMEGGELFD-----KVVGNKRLKEATCKLYFYQMLLAVQY 254
Query: 124 IHQYTKPYYVHRDVKTSNILLDS---NFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
+H+ +HRD+K N+LL S + KI DFG K+L + + + GT Y
Sbjct: 255 LHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET----SLMRTLCGTPTY 307
Query: 181 LAPEY---VRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLV 232
LAPE V D ++ GV+L ++G S EHR+ V
Sbjct: 308 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS-----------EHRTQV 351
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 116/287 (40%), Gaps = 41/287 (14%)
Query: 20 IGQGSYGSVYLGKLRG--KNAAIKQMKNTK-----------SKEFSSELKILCKVHSNLI 66
+G G+ G V L R K AIK + K + +E++IL K++ I
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 83
Query: 67 ELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ 126
I + ++V E + G L D V G K L T ++Y+H+
Sbjct: 84 IKIKNFFDAEDYYIVLELMEGGELFD-----KVVGNKRLKEATCKLYFYQMLLAVQYLHE 138
Query: 127 YTKPYYVHRDVKTSNILLDS---NFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
+HRD+K N+LL S + KI DFG K+L + + + GT YLAP
Sbjct: 139 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET----SLMRTLCGTPTYLAP 191
Query: 184 EY---VRDGCVTTKSDVYAFGVVLMELITGQQALS--RDANPGNNQYT--EHRSLVDYML 236
E V D ++ GV+L ++G S R +Q T ++ + +
Sbjct: 192 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 251
Query: 237 AVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRR 283
V D + KL +DP R+ + L+ L DE+ KR+
Sbjct: 252 EVSEKALDLVKKLL-VVDPK-ARFTTEEALRHPWLQ----DEDMKRK 292
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 105/254 (41%), Gaps = 44/254 (17%)
Query: 13 NFSTSLK--------IGQGSYGSV-YLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV-- 61
NF SLK +G GS G+V + G +G+ A+K+M E+K+L +
Sbjct: 8 NFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDD 67
Query: 62 HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIAL--DAAK 119
H N+I L++ E N L D + +V + I+L A
Sbjct: 68 HPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 120 GLEYIHQYTKPYYVHRDVKTSNILLDS-------------NFRAKIADFGLVKLLEHSP- 165
G+ ++H +HRD+K NIL+ + N R I+DFGL K L+
Sbjct: 127 GVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 183
Query: 166 EIAAAASRIVGTFGYLAPEYVRDGC-------VTTKSDVYAFGVVLMELITGQQALSRDA 218
+ GT G+ APE + + +T D+++ G V + LS+
Sbjct: 184 XFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYI------LSKGK 237
Query: 219 NPGNNQYTEHRSLV 232
+P ++Y+ +++
Sbjct: 238 HPFGDKYSRESNII 251
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 94/235 (40%), Gaps = 42/235 (17%)
Query: 17 SLKIGQGSYGSVYLGKLRG--KNAAIKQMKNTK-----------SKEFSSELKILCKVHS 63
S +G G+ G V L R K AI+ + K + +E++IL K++
Sbjct: 154 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH 213
Query: 64 NLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEY 123
I I + ++V E + G L D V G K L T ++Y
Sbjct: 214 PCIIKIKNFFDAEDYYIVLELMEGGELFD-----KVVGNKRLKEATCKLYFYQMLLAVQY 268
Query: 124 IHQYTKPYYVHRDVKTSNILLDS---NFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
+H+ +HRD+K N+LL S + KI DFG K+L + + + GT Y
Sbjct: 269 LHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET----SLMRTLCGTPTY 321
Query: 181 LAPEY---VRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLV 232
LAPE V D ++ GV+L ++G S EHR+ V
Sbjct: 322 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS-----------EHRTQV 365
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 101/241 (41%), Gaps = 47/241 (19%)
Query: 11 TSNFSTSLKIGQGSYGSVY--LGKLRGKNAAIKQMKNTKSKEFSSELKI-------LCKV 61
T+ F KIG G +GSV+ + +L G AIK+ K + + + +
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 65
Query: 62 HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIA---LDAA 118
HS+++ A D + + EY G+L+D + + + +++ ++ L
Sbjct: 66 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAIS----ENYRIMSYFKEAELKDLLLQVG 121
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILL-------------------DSNFRAKIADFGLVK 159
+GL YIH + VH D+K SNI + + KI D G V
Sbjct: 122 RGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT 178
Query: 160 LLEHSPEIAAAASRIVGTFGYLAPEYVRDGCV-TTKSDVYAFGVVLMELITGQQALSRDA 218
+ SP++ SR +LA E +++ K+D++A + ++ G + L R+
Sbjct: 179 RIS-SPQVEEGDSR------FLANEVLQENYTHLPKADIFALALTVV-XAAGAEPLPRNG 230
Query: 219 N 219
+
Sbjct: 231 D 231
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 112/255 (43%), Gaps = 57/255 (22%)
Query: 20 IGQGSYGSV---YLGKLRGKNAAIKQMKNTKS----KEFSSELKILCKV-HSNLIELIGY 71
+G G+YGSV Y +LR K A K + +S + EL++L + H N+I L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 72 AAGGDSL------FLVY--------EYAQNGALSD-HLHWPSVKGKKPLAWTTRVQIALD 116
S+ +LV ++ ALSD H+ + +
Sbjct: 96 FTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF----------------LVYQ 139
Query: 117 AAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVG 176
+GL+YIH +HRD+K SN+ ++ + +I DFGL + + + V
Sbjct: 140 LLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEE------MTGYVA 190
Query: 177 TFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYM 235
T Y APE + + ++ D+++ G ++ EL+ G+ PG++ + + + M
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF-----PGSDYIDQLKRI---M 242
Query: 236 LAVFNDTKDFMAKLT 250
V + + +AK++
Sbjct: 243 EVVGTPSPEVLAKIS 257
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 101/241 (41%), Gaps = 47/241 (19%)
Query: 11 TSNFSTSLKIGQGSYGSVY--LGKLRGKNAAIKQMKNTKSKEFSSELKI-------LCKV 61
T+ F KIG G +GSV+ + +L G AIK+ K + + + +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 62 HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIA---LDAA 118
HS+++ A D + + EY G+L+D + + + +++ ++ L
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAIS----ENYRIMSYFKEAELKDLLLQVG 123
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILL-------------------DSNFRAKIADFGLVK 159
+GL YIH + VH D+K SNI + + KI D G V
Sbjct: 124 RGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT 180
Query: 160 LLEHSPEIAAAASRIVGTFGYLAPEYVRDGCV-TTKSDVYAFGVVLMELITGQQALSRDA 218
+ SP++ SR +LA E +++ K+D++A + ++ G + L R+
Sbjct: 181 RIS-SPQVEEGDSR------FLANEVLQENYTHLPKADIFALALTVV-CAAGAEPLPRNG 232
Query: 219 N 219
+
Sbjct: 233 D 233
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 101/241 (41%), Gaps = 47/241 (19%)
Query: 11 TSNFSTSLKIGQGSYGSVY--LGKLRGKNAAIKQMKNTKSKEFSSELKI-------LCKV 61
T+ F KIG G +GSV+ + +L G AIK+ K + + + +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 62 HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIA---LDAA 118
HS+++ A D + + EY G+L+D + + + +++ ++ L
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAIS----ENYRIMSYFKEAELKDLLLQVG 125
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILL-------------------DSNFRAKIADFGLVK 159
+GL YIH + VH D+K SNI + + KI D G V
Sbjct: 126 RGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT 182
Query: 160 LLEHSPEIAAAASRIVGTFGYLAPEYVRDGCV-TTKSDVYAFGVVLMELITGQQALSRDA 218
+ SP++ SR +LA E +++ K+D++A + ++ G + L R+
Sbjct: 183 RIS-SPQVEEGDSR------FLANEVLQENYTHLPKADIFALALTVV-CAAGAEPLPRNG 234
Query: 219 N 219
+
Sbjct: 235 D 235
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKN-----TKSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 19 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 76 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI DF L + H+ + +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLAR---HTDD---EMTGY 182
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 22/204 (10%)
Query: 13 NFSTSLKIGQGSYGSVYLGKLRGK-NAAIKQMKNTKS--KEFSSELKILCKVHSNLIELI 69
+F ++G GSYG V+ K+R K + + +K + S + + L +V S+ E +
Sbjct: 58 SFQRLSRLGHGSYGEVF--KVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSH--EKV 113
Query: 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIA------LDAAKGLEY 123
G L +E L L PS++ + AW + A D L +
Sbjct: 114 GQHPCCVRLEQAWEEGGILYLQTELCGPSLQ-QHCEAWGASLPEAQVWGYLRDTLLALAH 172
Query: 124 IHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183
+H VH DVK +NI L R K+ DFGL+ L A A G Y+AP
Sbjct: 173 LHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVEL----GTAGAGEVQEGDPRYMAP 225
Query: 184 EYVRDGCVTTKSDVYAFGVVLMEL 207
E ++ G T +DV++ G+ ++E+
Sbjct: 226 ELLQ-GSYGTAADVFSLGLTILEV 248
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 101/241 (41%), Gaps = 47/241 (19%)
Query: 11 TSNFSTSLKIGQGSYGSVY--LGKLRGKNAAIKQMKNTKSKEFSSELKI-------LCKV 61
T+ F KIG G +GSV+ + +L G AIK+ K + + + +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 62 HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIA---LDAA 118
HS+++ A D + + EY G+L+D + + + +++ ++ L
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAIS----ENYRIMSYFKEAELKDLLLQVG 123
Query: 119 KGLEYIHQYTKPYYVHRDVKTSNILL-------------------DSNFRAKIADFGLVK 159
+GL YIH + VH D+K SNI + + KI D G V
Sbjct: 124 RGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT 180
Query: 160 LLEHSPEIAAAASRIVGTFGYLAPEYVRDGCV-TTKSDVYAFGVVLMELITGQQALSRDA 218
+ SP++ SR +LA E +++ K+D++A + ++ G + L R+
Sbjct: 181 RIS-SPQVEEGDSR------FLANEVLQENYTHLPKADIFALALTVV-CAAGAEPLPRNG 232
Query: 219 N 219
+
Sbjct: 233 D 233
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKN-----TKSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 19 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 76 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI FGL + H+ + +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLAR---HTDD---EMTGY 182
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 94/231 (40%), Gaps = 42/231 (18%)
Query: 20 IGQGSYGSVYL--GKLRGKNAAIKQMKNTKSKEFSSELKIL---CKVHSNLIELIGYAAG 74
IG G++G L KL + A+K ++ + + + + +I+ H N++
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILT 87
Query: 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAK--------GLEYIHQ 126
L ++ EYA G L + + + + D A+ G+ Y H
Sbjct: 88 PTHLAIIMEYASGGELYERI-------------CNAGRFSEDEARFFFQQLLSGVSYCHS 134
Query: 127 YTKPYYVHRDVKTSNILLDSN--FRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
HRD+K N LLD + R KI DFG K S + + VGT Y+APE
Sbjct: 135 MQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSK----SSVLHSQPKSTVGTPAYIAPE 187
Query: 185 YVR----DGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSL 231
+ DG + +DV++ GV L ++ G P + + T R L
Sbjct: 188 VLLRQEYDGKI---ADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRIL 235
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 111/255 (43%), Gaps = 57/255 (22%)
Query: 20 IGQGSYGSV---YLGKLRGKNAAIKQMKNTKS----KEFSSELKILCKV-HSNLIELIGY 71
+G G+YGSV Y +LR K A K + +S + EL++L + H N+I L+
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 87
Query: 72 AAGGDSL------FLVY--------EYAQNGALSD-HLHWPSVKGKKPLAWTTRVQIALD 116
S+ +LV + ALSD H+ + +
Sbjct: 88 FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF----------------LVYQ 131
Query: 117 AAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVG 176
+GL+YIH +HRD+K SN+ ++ + +I DFGL + + + V
Sbjct: 132 LLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEE------MTGYVA 182
Query: 177 TFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYM 235
T Y APE + + ++ D+++ G ++ EL+ G+ PG++ + + + M
Sbjct: 183 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF-----PGSDYIDQLKRI---M 234
Query: 236 LAVFNDTKDFMAKLT 250
V + + +AK++
Sbjct: 235 EVVGTPSPEVLAKIS 249
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 12/101 (11%)
Query: 112 QIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAA 171
+IA+ K LE++H +K +HRDVK SN+L+++ + K DFG+ L + A
Sbjct: 140 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYL-----VDDVA 192
Query: 172 SRI-VGTFGYLAPEYVRDGC----VTTKSDVYAFGVVLMEL 207
I G Y APE + + KSD+++ G+ +EL
Sbjct: 193 KDIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKN-----TKSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 19 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 76 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI D GL + H+ + +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLAR---HTDD---EMTGY 182
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKN-----TKSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 19 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 76 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI D GL + H+ + +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLAR---HTDD---EMTGY 182
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 102/248 (41%), Gaps = 56/248 (22%)
Query: 4 YNEVRDATSNFSTSLKIGQGSYGSVYLGKLR-----GKNAAIKQMKNTKSK-EFSSELKI 57
Y V ++ F KIG+G++ SVYL + + A+K + T ++EL+
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQC 72
Query: 58 LCKV--HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIAL 115
L N++ + D + + Y ++ + D L+ L++ + L
Sbjct: 73 LTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILN--------SLSFQEVREYML 124
Query: 116 DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRA-KIADFGLVK--------------- 159
+ K L+ IHQ+ VHRDVK SN L + + + DFGL +
Sbjct: 125 NLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQS 181
Query: 160 --------------LLEHSPEIAAAASRIVGTFGYLAPEYVRDGCV--TTKSDVYAFGVV 203
L ++A A GT G+ APE V C TT D+++ GV+
Sbjct: 182 EAQQERCSQNKCSICLSRRQQVAPRA----GTPGFRAPE-VLTKCPNQTTAIDMWSAGVI 236
Query: 204 LMELITGQ 211
+ L++G+
Sbjct: 237 FLSLLSGR 244
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 104/221 (47%), Gaps = 31/221 (14%)
Query: 13 NFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMK-----NTKSKEFSSE---LKILCKVHSN 64
NF T K+ + G ++ G+ +G + +K +K KS++F+ E L+I H N
Sbjct: 13 NFLT--KLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFS--HPN 68
Query: 65 LIELIG--YAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTR-VQIALDAAKGL 121
++ ++G + L+ + G+L + LH +G + ++ V+ ALD A+G
Sbjct: 69 VLPVLGACQSPPAPHPTLITHWXPYGSLYNVLH----EGTNFVVDQSQAVKFALDXARGX 124
Query: 122 EYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYL 181
++H +P + + ++ +D + A+I+ VK SP A + ++
Sbjct: 125 AFLHTL-EPLIPRHALNSRSVXIDEDXTARISX-ADVKFSFQSPGRXYAPA-------WV 175
Query: 182 APEYVRDGCVTTK---SDVYAFGVVLMELITGQQALSRDAN 219
APE ++ T +D ++F V+L EL+T + + +N
Sbjct: 176 APEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSN 216
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 28/218 (12%)
Query: 6 EVRDATSNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQMKN-----TKSKEFSSELKIL 58
EV + N S +G G+YGSV G A+K++ +K EL++L
Sbjct: 19 EVPERYQNLS---PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 59 CKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT--RVQIAL 115
+ H N+I L+ SL E + L HL + T VQ +
Sbjct: 76 KHMKHENVIGLLDVFTPARSL----EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 116 -DAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRI 174
+GL+YIH +HRD+K SN+ ++ + KI D GL + H+ + +
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLAR---HTDD---EMTGY 182
Query: 175 VGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQ 211
V T Y APE + + ++ D+++ G ++ EL+TG+
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 111/255 (43%), Gaps = 57/255 (22%)
Query: 20 IGQGSYGSV---YLGKLRGKNAAIKQMKNTKS----KEFSSELKILCKV-HSNLIELIGY 71
+G G+YGSV Y +LR K A K + +S + EL++L + H N+I L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 72 AAGGDSL------FLVY--------EYAQNGALSD-HLHWPSVKGKKPLAWTTRVQIALD 116
S+ +LV + ALSD H+ + +
Sbjct: 96 FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF----------------LVYQ 139
Query: 117 AAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVG 176
+GL+YIH +HRD+K SN+ ++ + +I DFGL + + + V
Sbjct: 140 LLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEE------MTGYVA 190
Query: 177 TFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYM 235
T Y APE + + ++ D+++ G ++ EL+ G+ PG++ + + + M
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF-----PGSDYIDQLKRI---M 242
Query: 236 LAVFNDTKDFMAKLT 250
V + + +AK++
Sbjct: 243 EVVGTPSPEVLAKIS 257
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 25/204 (12%)
Query: 19 KIGQGSYGSVYLGK--LRGKNAAIKQMKNTKSKEFS----SELKILCKV-HSNLIELIGY 71
K+G+G+Y +VY GK L A+K+++ + E+ +L + H+N++ L
Sbjct: 9 KLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 72 AAGGDSLFLVYEYAQNGA---LSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT 128
SL LV+EY L D + ++ K + +GL Y H+
Sbjct: 69 IHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLF--------QLLRGLAYCHRQK 120
Query: 129 KPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRD 188
+HRD+K N+L++ K+ADFGL + S + +V T Y P+ +
Sbjct: 121 ---VLHRDLKPQNLLINERGELKLADFGLAR--AKSIPTKTYDNEVV-TLWYRPPDILLG 174
Query: 189 GC-VTTKSDVYAFGVVLMELITGQ 211
+T+ D++ G + E+ TG+
Sbjct: 175 STDYSTQIDMWGVGCIFYEMATGR 198
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 4 YNEVRDATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTK-------------SKE 50
++++R+ F+ SL GQG++ ++ G +R + Q+ T+ S+
Sbjct: 2 FHKIRNEDLIFNESL--GQGTFTKIFKG-VRREVGDYGQLHETEVLLKVLDKAHRNYSES 58
Query: 51 FSSELKILCKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT 109
F ++ K+ H +L+ G GD LV E+ + G+L +L K K +
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLK----KNKNCINILW 114
Query: 110 RVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAA 169
++++A A + ++ + T +H +V NILL K + +KL + I
Sbjct: 115 KLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV 171
Query: 170 AASRIVGT-FGYLAPEYVRDG-CVTTKSDVYAFGVVLMELITG 210
I+ ++ PE + + + +D ++FG L E+ +G
Sbjct: 172 LPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 32/215 (14%)
Query: 14 FSTSLKIGQGSYGSVYLGKLRGKNAAIK-QMKNTKSKE----FSSELKILCKVHSNLIEL 68
F KIG GS+G +YLG N + +++N K+K + S++ + + + + +
Sbjct: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNV 68
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT 128
+ GD LV + +L D ++ S K L+ T + +A +E++H +
Sbjct: 69 RWFGVEGDYNVLVMDLL-GPSLEDLFNFCSRK----LSLKTVLMLADQMINRVEFVHSKS 123
Query: 129 KPYYVHRDVKTSNILLDSNFRAK---IADFGLVKLL------EHSP----EIAAAASRIV 175
++HRD+K N L+ RA I DFGL K +H P + +R
Sbjct: 124 ---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYA 180
Query: 176 GTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITG 210
+L E R + D+ + G VLM + G
Sbjct: 181 SVNTHLGIEQSR------RDDLESLGYVLMYFLRG 209
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 47/253 (18%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQM-----KNTKSKEFSSELKILCKV--HSNLIELIG 70
IG G+ G V + +N AIK++ T +K EL +L KV H N+I L+
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYREL-VLMKVVNHKNIIGLLN 90
Query: 71 YAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAK----------G 120
SL E Q+ + L ++ + +Q+ LD + G
Sbjct: 91 VFTPQKSL----EEFQDVYIVMELMDANL--------SQVIQMELDHERMSYLLYQMLVG 138
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
++++H +HRD+K SNI++ S+ KI DFGL + + + + V T Y
Sbjct: 139 IKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR----TAGTSFMMTPYVVTRYY 191
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240
APE + D+++ GV++ E+I G PG + + +++ +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLF-----PGTDHIDQWNKVIEQL---GT 243
Query: 241 DTKDFMAKLTECL 253
+ +FM KL +
Sbjct: 244 PSPEFMKKLQPTV 256
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 93/227 (40%), Gaps = 33/227 (14%)
Query: 2 FSYNEVRDAT----SNFSTSLKIGQGSYGSV--YLGKLRGKNAAIKQM-----KNTKSKE 50
F EV D+T + IG G+ G V + G N A+K++ T +K
Sbjct: 10 FYSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKR 69
Query: 51 FSSELKIL-CKVHSNLIELIGYAAGGDSL------FLVYEYAQNGALSDHLHWPSVKGKK 103
EL +L C H N+I L+ +L +LV E + L +H
Sbjct: 70 AYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLCQVIH-------M 121
Query: 104 PLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEH 163
L + G++++H +HRD+K SNI++ S+ KI DFGL +
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---- 174
Query: 164 SPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITG 210
+ + V T Y APE + D+++ G ++ EL+ G
Sbjct: 175 TACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 21/201 (10%)
Query: 19 KIGQGSYGSVY--LGKLRGKNAAIKQMKNTKSK----EFSSELKILCKVH-SNLIELIGY 71
++G G++G V+ + K G+ + + NT +E+ I+ ++H LI L
Sbjct: 58 ELGSGAFGVVHRCVEKATGR-VFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA 116
Query: 72 AAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPY 131
+ L+ E+ G L D + K ++ + A +GL+++H+++
Sbjct: 117 FEDKYEMVLILEFLSGGELFDRIAAEDYK----MSEAEVINYMRQACEGLKHMHEHS--- 169
Query: 132 YVHRDVKTSNILLDSN--FRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG 189
VH D+K NI+ ++ KI DFGL L + EI + T + APE V
Sbjct: 170 IVHLDIKPENIMCETKKASSVKIIDFGLATKL-NPDEIVKVTT---ATAEFAAPEIVDRE 225
Query: 190 CVTTKSDVYAFGVVLMELITG 210
V +D++A GV+ L++G
Sbjct: 226 PVGFYTDMWAIGVLGYVLLSG 246
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 86/205 (41%), Gaps = 29/205 (14%)
Query: 20 IGQGSYGSV--YLGKLRGKNAAIKQM-----KNTKSKEFSSELKIL-CKVHSNLIELIGY 71
IG G+ G V + G N A+K++ T +K EL +L C H N+I L+
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 89
Query: 72 AAGGDSL------FLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIH 125
+L +LV E + L +H L + G++++H
Sbjct: 90 FTPQKTLEEFQDVYLVMEL-MDANLCQVIH-------MELDHERMSYLLYQMLCGIKHLH 141
Query: 126 QYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEY 185
+HRD+K SNI++ S+ KI DFGL + + + V T Y APE
Sbjct: 142 SAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR----TASTNFMMTPYVVTRYYRAPEV 194
Query: 186 VRDGCVTTKSDVYAFGVVLMELITG 210
+ D+++ G ++ EL+ G
Sbjct: 195 ILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 105/248 (42%), Gaps = 45/248 (18%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQM-----KNTKSKEFSSELKIL-CKVHSNLIELIGY 71
IG G+ G V + +N AIK++ T +K EL ++ C H N+I L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 72 AAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAK----------GL 121
SL E Q+ + L ++ + +Q+ LD + G+
Sbjct: 92 FTPQKSL----EEFQDVYIVMELMDANL--------SQVIQMELDHERMSYLLYQMLCGI 139
Query: 122 EYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYL 181
+++H +HRD+K SNI++ S+ KI DFGL + + + + V T Y
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYR 192
Query: 182 APEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFND 241
APE + D+++ G ++ E+I G PG + + +++ +
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLF-----PGTDHIDQWNKVIEQL---GTP 244
Query: 242 TKDFMAKL 249
+ +FM KL
Sbjct: 245 SPEFMKKL 252
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 12/121 (9%)
Query: 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVT 192
+HRD+K SNI++ S+ KI DFGL + + + + V T Y APE +
Sbjct: 148 IHRDLKPSNIVVKSDATLKILDFGLAR----TAGTSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 193 TKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDFMAKLTEC 252
D+++ GV++ E+I G PG + + +++ + + +FM KL
Sbjct: 204 ENVDIWSVGVIMGEMIKGGVLF-----PGTDHIDQWNKVIEQL---GTPSPEFMKKLQPT 255
Query: 253 L 253
+
Sbjct: 256 V 256
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 98/223 (43%), Gaps = 26/223 (11%)
Query: 4 YNEVRDATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTK-------------SKE 50
++++R+ F+ SL GQG++ ++ G +R + Q+ T+ S+
Sbjct: 2 FHKIRNEDLIFNESL--GQGTFTKIFKG-VRREVGDYGQLHETEVLLKVLDKAHRNYSES 58
Query: 51 FSSELKILCKV-HSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTT 109
F ++ K+ H +L+ G GD LV E+ + G+L +L K K +
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLK----KNKNCINILW 114
Query: 110 RVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAA 169
++++A A + ++ + T +H +V NILL K + +KL + I
Sbjct: 115 KLEVAKQLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV 171
Query: 170 AASRIVGT-FGYLAPEYVRDG-CVTTKSDVYAFGVVLMELITG 210
I+ ++ PE + + + +D ++FG L E+ +G
Sbjct: 172 LPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 105/248 (42%), Gaps = 45/248 (18%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQM-----KNTKSKEFSSELKIL-CKVHSNLIELIGY 71
IG G+ G V + +N AIK++ T +K EL ++ C H N+I L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 72 AAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAK----------GL 121
SL E Q+ + L ++ + +Q+ LD + G+
Sbjct: 92 FTPQKSL----EEFQDVYIVMELMDANL--------SQVIQMELDHERMSYLLYQMLCGI 139
Query: 122 EYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYL 181
+++H +HRD+K SNI++ S+ KI DFGL + + + + V T Y
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR----TAGTSFMMTPYVVTRYYR 192
Query: 182 APEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFND 241
APE + D+++ G ++ E+I G PG + + +++ +
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLF-----PGTDHIDQWNKVIEQL---GTP 244
Query: 242 TKDFMAKL 249
+ +FM KL
Sbjct: 245 SPEFMKKL 252
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 27/208 (12%)
Query: 20 IGQGSYGSVY--LGKLRGKNAAIKQM---KNTKSKEFSSE-LK---ILCKV--HSNLIEL 68
IG+G + V + + G+ A+K + K T S S+E LK +C + H +++EL
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG---KKPLAWTTRVQIALDAAKGLEYIH 125
+ + L++V+E+ L + + G + +A QI + L Y H
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL----EALRYCH 147
Query: 126 QYTKPYYVHRDVKTSNILL---DSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLA 182
+HRDVK +LL +++ K+ FG+ L S +A VGT ++A
Sbjct: 148 DNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR---VGTPHFMA 201
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITG 210
PE V+ DV+ GV+L L++G
Sbjct: 202 PEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 27/208 (12%)
Query: 20 IGQGSYGSVY--LGKLRGKNAAIKQM---KNTKSKEFSSE-LK---ILCKV--HSNLIEL 68
IG+G + V + + G+ A+K + K T S S+E LK +C + H +++EL
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 93
Query: 69 IGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKG---KKPLAWTTRVQIALDAAKGLEYIH 125
+ + L++V+E+ L + + G + +A QI + L Y H
Sbjct: 94 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL----EALRYCH 149
Query: 126 QYTKPYYVHRDVKTSNILL---DSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLA 182
+HRDVK +LL +++ K+ FG+ L S +A VGT ++A
Sbjct: 150 DNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR---VGTPHFMA 203
Query: 183 PEYVRDGCVTTKSDVYAFGVVLMELITG 210
PE V+ DV+ GV+L L++G
Sbjct: 204 PEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 104/248 (41%), Gaps = 45/248 (18%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQM-----KNTKSKEFSSELKIL-CKVHSNLIELIGY 71
IG G+ G V + +N AIK++ T +K EL ++ C H N+I L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 72 AAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAK----------GL 121
SL E Q+ + L ++ +Q+ LD + G+
Sbjct: 92 FTPQKSL----EEFQDVYIVMELMDANL--------CQVIQMELDHERMSYLLYQMLCGI 139
Query: 122 EYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYL 181
+++H +HRD+K SNI++ S+ KI DFGL + + + + V T Y
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYR 192
Query: 182 APEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFND 241
APE + D+++ G ++ E+I G PG + + +++ +
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLF-----PGTDHIDQWNKVIEQL---GTP 244
Query: 242 TKDFMAKL 249
+ +FM KL
Sbjct: 245 SPEFMKKL 252
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 90/213 (42%), Gaps = 45/213 (21%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQM-----KNTKSKEFSSELKIL-CKVHSNLIELIGY 71
IG G+ G V + +N AIK++ T +K EL ++ C H N+I L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 72 AAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAK----------GL 121
SL E Q+ + L ++ +Q+ LD + G+
Sbjct: 92 FTPQKSL----EEFQDVYIVMELMDANL--------CQVIQMELDHERMSYLLYQMLCGI 139
Query: 122 EYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKL----LEHSPEIAAAASRIVGT 177
+++H +HRD+K SNI++ S+ KI DFGL + +PE+ T
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVV--------T 188
Query: 178 FGYLAPEYVRDGCVTTKSDVYAFGVVLMELITG 210
Y APE + D+++ G ++ E+I G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 97/218 (44%), Gaps = 35/218 (16%)
Query: 19 KIGQGSYGSVYL--GKLRGKNAAIKQM-----KNTKSKEFSSELKILCKVHSNLIELIGY 71
K+G+G + V L G G A+K++ ++ + + +++ L H N++ L+ Y
Sbjct: 36 KLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFN-HPNILRLVAY 94
Query: 72 A----AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIA---LDAAKGLEYI 124
+L+ + + G L + + KG + T QI L +GLE I
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGN----FLTEDQILWLLLGICRGLEAI 150
Query: 125 HQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKL----LEHSPEIAA----AASRIVG 176
H Y HRD+K +NILL + + D G + +E S + AA R
Sbjct: 151 HAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRC-- 205
Query: 177 TFGYLAPEY--VRDGCVT-TKSDVYAFGVVLMELITGQ 211
T Y APE V+ CV ++DV++ G VL ++ G+
Sbjct: 206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 90/209 (43%), Gaps = 37/209 (17%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQM-----KNTKSKEFSSELKIL-CKVHSNLIELIGY 71
IG G+ G V + +N AIK++ T +K EL ++ C H N+I L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 72 AAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAK----------GL 121
SL E Q+ + L ++ +Q+ LD + G+
Sbjct: 92 FTPQKSL----EEFQDVYIVMELMDANL--------CQVIQMELDHERMSYLLYQMLCGI 139
Query: 122 EYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYL 181
+++H +HRD+K SNI++ S+ KI DFGL + + + + V T Y
Sbjct: 140 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYR 192
Query: 182 APEYVRDGCVTTKSDVYAFGVVLMELITG 210
APE + D+++ G ++ E+I G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 90/209 (43%), Gaps = 37/209 (17%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQM-----KNTKSKEFSSELKIL-CKVHSNLIELIGY 71
IG G+ G V + +N AIK++ T +K EL ++ C H N+I L+
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 92
Query: 72 AAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAK----------GL 121
SL E Q+ + L ++ +Q+ LD + G+
Sbjct: 93 FTPQKSL----EEFQDVYIVMELMDANL--------CQVIQMELDHERMSYLLYQMLCGI 140
Query: 122 EYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYL 181
+++H +HRD+K SNI++ S+ KI DFGL + + + + V T Y
Sbjct: 141 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYR 193
Query: 182 APEYVRDGCVTTKSDVYAFGVVLMELITG 210
APE + D+++ G ++ E+I G
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 134 HRDVKTSNILLDS-NFRAKIADFGLV-KLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCV 191
HRD+K N+L++S + K+ DFG KL+ P +A SR Y APE +
Sbjct: 164 HRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSRF-----YRAPELMLGATE 218
Query: 192 TTKS-DVYAFGVVLMELITGQQALS 215
T S D+++ G V ELI G+ S
Sbjct: 219 YTPSIDLWSIGCVFGELILGKPLFS 243
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 37/209 (17%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQM-----KNTKSKEFSSELKIL-CKVHSNLIELIGY 71
IG G+ G V + +N AIK++ T +K EL ++ C H N+I L+
Sbjct: 34 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 93
Query: 72 AAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAK----------GL 121
SL E Q+ + L ++ +Q+ LD + G+
Sbjct: 94 FTPQKSL----EEFQDVYIVMELMDANL--------CQVIQMELDHERMSYLLYQMLCGI 141
Query: 122 EYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYL 181
+++H +HRD+K SNI++ S+ KI DFGL + S + V T Y
Sbjct: 142 KHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVP----FVVTRYYR 194
Query: 182 APEYVRDGCVTTKSDVYAFGVVLMELITG 210
APE + D+++ G ++ E+I G
Sbjct: 195 APEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 115/297 (38%), Gaps = 63/297 (21%)
Query: 20 IGQGSYGSVYLG-----------KLRGKNAAIKQMKNTKSKEFSSELKILCKVH-SNLIE 67
IGQGSYG V + K+ KN I+Q+ + +E++++ K+H N+
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNK-IRQINPKDVERIKTEVRLMKKLHHPNIAR 92
Query: 68 LIGYAAGGDSLFLVYEYAQNGALSDHLH---------------------WP--------- 97
L + LV E G L D L+ P
Sbjct: 93 LYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAING 152
Query: 98 SVKG-KKPLAWTTRVQIALDAAK----GLEYIHQYTKPYYVHRDVKTSNILLDSN--FRA 150
S+ G ++ L + R ++ + + L Y+H HRD+K N L +N F
Sbjct: 153 SIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG---ICHRDIKPENFLFSTNKSFEI 209
Query: 151 KIADFGLVKLLE--HSPEIAAAASRIVGTFGYLAPEYVR--DGCVTTKSDVYAFGVVLME 206
K+ DFGL K ++ E ++ GT ++APE + + K D ++ GV+L
Sbjct: 210 KLVDFGLSKEFYKLNNGEYYGMTTK-AGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHL 268
Query: 207 LITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKD 263
L+ G PG N +++ L N + ++ L L NL + D
Sbjct: 269 LLMGAVPF-----PGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVD 320
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 68/149 (45%), Gaps = 16/149 (10%)
Query: 19 KIGQGSYGSVYLGK--LRGKNAAIK-QMKNTKSKEFSSELKILCKVHSNL-IELIGY-AA 73
KIG GS+G +YLG G+ AIK + TK + E KI + + I I + A
Sbjct: 16 KIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGA 75
Query: 74 GGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYV 133
GD +V E +L D ++ S K + T + +A +EYIH ++
Sbjct: 76 EGDYNVMVMELL-GPSLEDLFNFCSRK----FSLKTVLLLADQMISRIEYIHSKN---FI 127
Query: 134 HRDVKTSNILLDSNFRAK---IADFGLVK 159
HRDVK N L+ + I DFGL K
Sbjct: 128 HRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 68/149 (45%), Gaps = 16/149 (10%)
Query: 19 KIGQGSYGSVYLGK--LRGKNAAIK-QMKNTKSKEFSSELKILCKVHSNL-IELIGY-AA 73
KIG GS+G +YLG G+ AIK + TK + E KI + + I I + A
Sbjct: 14 KIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGA 73
Query: 74 GGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYV 133
GD +V E +L D ++ S K + T + +A +EYIH ++
Sbjct: 74 EGDYNVMVMELL-GPSLEDLFNFCSRK----FSLKTVLLLADQMISRIEYIHSKN---FI 125
Query: 134 HRDVKTSNILLDSNFRAK---IADFGLVK 159
HRDVK N L+ + I DFGL K
Sbjct: 126 HRDVKPDNFLMGLGKKGNLVYIIDFGLAK 154
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 106/249 (42%), Gaps = 47/249 (18%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQM-----KNTKSKEFSSELKILCKV--HSNLIELIG 70
IG G+ G V + +N AIK++ T +K EL +L KV H N+I L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYREL-VLMKVVNHKNIIGLLN 90
Query: 71 YAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAK----------G 120
SL E Q+ + L ++ + +Q+ LD + G
Sbjct: 91 VFTPQKSL----EEFQDVYIVMELMDANL--------SQVIQMELDHERMSYLLYQMLCG 138
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
++++H +HRD+K SNI++ S+ KI DFGL + + + + V T Y
Sbjct: 139 IKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR----TAGTSFMMTPYVVTRYY 191
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240
APE + D+++ G ++ E+I G PG + + +++ +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF-----PGTDHIDQWNKVIEQL---GT 243
Query: 241 DTKDFMAKL 249
+ +FM KL
Sbjct: 244 PSPEFMKKL 252
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 107/253 (42%), Gaps = 47/253 (18%)
Query: 20 IGQGSYGSVYLG--KLRGKNAAIKQM-----KNTKSKEFSSELKILCKV--HSNLIELIG 70
IG G+ G V + +N AIK++ T +K EL +L KV H N+I L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYREL-VLMKVVNHKNIIGLLN 90
Query: 71 YAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAK----------G 120
SL E Q+ + L ++ + +Q+ LD + G
Sbjct: 91 VFTPQKSL----EEFQDVYIVMELMDANL--------SQVIQMELDHERMSYLLYQMLVG 138
Query: 121 LEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGY 180
++++H +HRD+K SNI++ S+ KI DFGL + + + + V T Y
Sbjct: 139 IKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR----TAGTSFMMTPYVVTRYY 191
Query: 181 LAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240
APE + D+++ G ++ E+I G PG + + +++ +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF-----PGTDHIDQWNKVIEQL---GT 243
Query: 241 DTKDFMAKLTECL 253
+ +FM KL +
Sbjct: 244 PSPEFMKKLQPTV 256
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 28/215 (13%)
Query: 19 KIGQGSYGSVY--LGKLRGKNAAIKQMKNTKSKEFSS-----ELKILCKV-HSNLIELIG 70
K+G+G+YG VY + + + AIK+++ +E E+ +L ++ H N+IEL
Sbjct: 41 KLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKS 100
Query: 71 YAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIAL-DAAKGLEYIHQYTK 129
L L++EYA+N L ++ K P ++ L G+ + H
Sbjct: 101 VIHHNHRLHLIFEYAEND-LKKYM------DKNPDVSMRVIKSFLYQLINGVNFCHSRR- 152
Query: 130 PYYVHRDVKTSNILLDSNFRA-----KIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPE 184
+HRD+K N+LL + + KI DFGL + I I+ T Y PE
Sbjct: 153 --CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF--GIPIRQFTHEII-TLWYRPPE 207
Query: 185 YVRDG-CVTTKSDVYAFGVVLMELITGQQALSRDA 218
+ +T D+++ + E++ D+
Sbjct: 208 ILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDS 242
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 95/225 (42%), Gaps = 41/225 (18%)
Query: 6 EVRDAT----SNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQM-----KNTKSKEFSSE 54
EV D+T + IG G+ G V + +N AIK++ T +K E
Sbjct: 7 EVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRE 66
Query: 55 LKIL-CKVHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
L ++ C H N+I L+ +L E Q+ L L ++ +Q+
Sbjct: 67 LVLMKCVNHKNIISLLNVFTPQKTL----EEFQDVYLVMELMDANL--------CQVIQM 114
Query: 114 ALDAAK----------GLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEH 163
LD + G++++H +HRD+K SNI++ S+ KI DFGL +
Sbjct: 115 ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---- 167
Query: 164 SPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELI 208
+ + + V T Y APE + D+++ G ++ E++
Sbjct: 168 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 95/225 (42%), Gaps = 41/225 (18%)
Query: 6 EVRDAT----SNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQM-----KNTKSKEFSSE 54
EV D+T + IG G+ G V + +N AIK++ T +K E
Sbjct: 8 EVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRE 67
Query: 55 LKIL-CKVHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
L ++ C H N+I L+ +L E Q+ L L ++ +Q+
Sbjct: 68 LVLMKCVNHKNIISLLNVFTPQKTL----EEFQDVYLVMELMDANL--------CQVIQM 115
Query: 114 ALDAAK----------GLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEH 163
LD + G++++H +HRD+K SNI++ S+ KI DFGL +
Sbjct: 116 ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---- 168
Query: 164 SPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELI 208
+ + + V T Y APE + D+++ G ++ E++
Sbjct: 169 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 95/225 (42%), Gaps = 41/225 (18%)
Query: 6 EVRDAT----SNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQM-----KNTKSKEFSSE 54
EV D+T + IG G+ G V + +N AIK++ T +K E
Sbjct: 15 EVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRE 74
Query: 55 LKIL-CKVHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
L ++ C H N+I L+ +L E Q+ L L ++ +Q+
Sbjct: 75 LVLMKCVNHKNIISLLNVFTPQKTL----EEFQDVYLVMELMDANL--------CQVIQM 122
Query: 114 ALDAAK----------GLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEH 163
LD + G++++H +HRD+K SNI++ S+ KI DFGL +
Sbjct: 123 ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---- 175
Query: 164 SPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELI 208
+ + + V T Y APE + D+++ G ++ E++
Sbjct: 176 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 95/225 (42%), Gaps = 41/225 (18%)
Query: 6 EVRDAT----SNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQM-----KNTKSKEFSSE 54
EV D+T + IG G+ G V + +N AIK++ T +K E
Sbjct: 8 EVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRE 67
Query: 55 LKIL-CKVHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
L ++ C H N+I L+ +L E Q+ L L ++ +Q+
Sbjct: 68 LVLMKCVNHKNIISLLNVFTPQKTL----EEFQDVYLVMELMDANL--------CQVIQM 115
Query: 114 ALDAAK----------GLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEH 163
LD + G++++H +HRD+K SNI++ S+ KI DFGL +
Sbjct: 116 ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---- 168
Query: 164 SPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELI 208
+ + + V T Y APE + D+++ G ++ E++
Sbjct: 169 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 95/225 (42%), Gaps = 41/225 (18%)
Query: 6 EVRDAT----SNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQM-----KNTKSKEFSSE 54
EV D+T + IG G+ G V + +N AIK++ T +K E
Sbjct: 14 EVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRE 73
Query: 55 LKIL-CKVHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
L ++ C H N+I L+ +L E Q+ L L ++ +Q+
Sbjct: 74 LVLMKCVNHKNIISLLNVFTPQKTL----EEFQDVYLVMELMDANL--------XQVIQM 121
Query: 114 ALDAAK----------GLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEH 163
LD + G++++H +HRD+K SNI++ S+ KI DFGL +
Sbjct: 122 ELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---- 174
Query: 164 SPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELI 208
+ + + V T Y APE + D+++ G ++ E++
Sbjct: 175 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 95/225 (42%), Gaps = 41/225 (18%)
Query: 6 EVRDAT----SNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQM-----KNTKSKEFSSE 54
EV D+T + IG G+ G V + +N AIK++ T +K E
Sbjct: 14 EVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRE 73
Query: 55 LKIL-CKVHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
L ++ C H N+I L+ +L E Q+ L L ++ +Q+
Sbjct: 74 LVLMKCVNHKNIISLLNVFTPQKTL----EEFQDVYLVMELMDANL--------CQVIQM 121
Query: 114 ALDAAK----------GLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEH 163
LD + G++++H +HRD+K SNI++ S+ KI DFGL +
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---- 174
Query: 164 SPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELI 208
+ + + V T Y APE + D+++ G ++ E++
Sbjct: 175 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 95/225 (42%), Gaps = 41/225 (18%)
Query: 6 EVRDAT----SNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQM-----KNTKSKEFSSE 54
EV D+T + IG G+ G V + +N AIK++ T +K E
Sbjct: 13 EVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRE 72
Query: 55 LKIL-CKVHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
L ++ C H N+I L+ +L E Q+ L L ++ +Q+
Sbjct: 73 LVLMKCVNHKNIISLLNVFTPQKTL----EEFQDVYLVMELMDANL--------CQVIQM 120
Query: 114 ALDAAK----------GLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEH 163
LD + G++++H +HRD+K SNI++ S+ KI DFGL +
Sbjct: 121 ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---- 173
Query: 164 SPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELI 208
+ + + V T Y APE + D+++ G ++ E++
Sbjct: 174 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 95/225 (42%), Gaps = 41/225 (18%)
Query: 6 EVRDAT----SNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQM-----KNTKSKEFSSE 54
EV D+T + IG G+ G V + +N AIK++ T +K E
Sbjct: 15 EVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRE 74
Query: 55 LKIL-CKVHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
L ++ C H N+I L+ +L E Q+ L L ++ +Q+
Sbjct: 75 LVLMKCVNHKNIISLLNVFTPQKTL----EEFQDVYLVMELMDANL--------CQVIQM 122
Query: 114 ALDAAK----------GLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEH 163
LD + G++++H +HRD+K SNI++ S+ KI DFGL +
Sbjct: 123 ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---- 175
Query: 164 SPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELI 208
+ + + V T Y APE + D+++ G ++ E++
Sbjct: 176 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 95/225 (42%), Gaps = 41/225 (18%)
Query: 6 EVRDAT----SNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQM-----KNTKSKEFSSE 54
EV D+T + IG G+ G V + +N AIK++ T +K E
Sbjct: 7 EVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRE 66
Query: 55 LKIL-CKVHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
L ++ C H N+I L+ +L E Q+ L L ++ +Q+
Sbjct: 67 LVLMKCVNHKNIISLLNVFTPQKTL----EEFQDVYLVMELMDANL--------XQVIQM 114
Query: 114 ALDAAK----------GLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEH 163
LD + G++++H +HRD+K SNI++ S+ KI DFGL +
Sbjct: 115 ELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---- 167
Query: 164 SPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELI 208
+ + + V T Y APE + D+++ G ++ E++
Sbjct: 168 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 111/275 (40%), Gaps = 43/275 (15%)
Query: 11 TSNFSTSLKIGQGSYGSVY--LGKLRGKNAAIKQMKNTKSKE-----------FSSELKI 57
+ +ST +G G++G V+ + K + K +K +K K E + E+ I
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 58 LCKV-HSNLIELIGYAAGGDSLFLVYEYAQNG----ALSDHLHWPSVKGKKPLAWTTRVQ 112
L +V H+N+I+++ LV E +G A D + +PLA Q
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDR----HPRLDEPLASYIFRQ 138
Query: 113 IALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAAS 172
+ +A G + +HRD+K NI++ +F K+ DFG LE
Sbjct: 139 LV--SAVGYLRLKD-----IIHRDIKDENIVIAEDFTIKLIDFGSAAYLER----GKLFY 187
Query: 173 RIVGTFGYLAPEYVRDGCVTTKS-DVYAFGVVLMELITG-------QQALSRDANPGNNQ 224
GT Y APE + ++++ GV L L+ ++ + +P
Sbjct: 188 TFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLV 247
Query: 225 YTEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTR 259
E SLV +L + + + KL DP +T+
Sbjct: 248 SKELMSLVSGLLQPVPERRTTLEKLV--TDPWVTQ 280
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 95/225 (42%), Gaps = 41/225 (18%)
Query: 6 EVRDAT----SNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQM-----KNTKSKEFSSE 54
EV D+T + IG G+ G V + +N AIK++ T +K E
Sbjct: 14 EVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRE 73
Query: 55 LKIL-CKVHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
L ++ C H N+I L+ +L E Q+ L L ++ +Q+
Sbjct: 74 LVLMKCVNHKNIISLLNVFTPQKTL----EEFQDVYLVMELMDANL--------CQVIQM 121
Query: 114 ALDAAK----------GLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEH 163
LD + G++++H +HRD+K SNI++ S+ KI DFGL +
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---- 174
Query: 164 SPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELI 208
+ + + V T Y APE + D+++ G ++ E++
Sbjct: 175 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 95/225 (42%), Gaps = 41/225 (18%)
Query: 6 EVRDAT----SNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQM-----KNTKSKEFSSE 54
EV D+T + IG G+ G V + +N AIK++ T +K E
Sbjct: 52 EVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRE 111
Query: 55 LKIL-CKVHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
L ++ C H N+I L+ +L E Q+ L L ++ +Q+
Sbjct: 112 LVLMKCVNHKNIISLLNVFTPQKTL----EEFQDVYLVMELMDANL--------CQVIQM 159
Query: 114 ALDAAK----------GLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEH 163
LD + G++++H +HRD+K SNI++ S+ KI DFGL +
Sbjct: 160 ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---- 212
Query: 164 SPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELI 208
+ + + V T Y APE + D+++ G ++ E++
Sbjct: 213 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 95/225 (42%), Gaps = 41/225 (18%)
Query: 6 EVRDAT----SNFSTSLKIGQGSYGSVYLG--KLRGKNAAIKQM-----KNTKSKEFSSE 54
EV D+T + IG G+ G V + +N AIK++ T +K E
Sbjct: 52 EVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRE 111
Query: 55 LKIL-CKVHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQI 113
L ++ C H N+I L+ +L E Q+ L L ++ +Q+
Sbjct: 112 LVLMKCVNHKNIISLLNVFTPQKTL----EEFQDVYLVMELMDANL--------CQVIQM 159
Query: 114 ALDAAK----------GLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEH 163
LD + G++++H +HRD+K SNI++ S+ KI DFGL +
Sbjct: 160 ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---- 212
Query: 164 SPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELI 208
+ + + V T Y APE + D+++ G ++ E++
Sbjct: 213 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 22/152 (14%)
Query: 19 KIGQGSYGSVYLGK--LRGKNAAIKQMKNTKSKEFSSELKILCKVHSNLIELIGY----- 71
KIG GS+G +YLG G+ AIK ++ K+K +L I K + + +G
Sbjct: 16 KIGSGSFGDIYLGANIASGEEVAIK-LECVKTKH--PQLHIESKFYKMMQGGVGIPSIKW 72
Query: 72 -AAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKP 130
A GD +V E +L D ++ S K + T + +A +EYIH
Sbjct: 73 CGAEGDYNVMVMELL-GPSLEDLFNFCSRK----FSLKTVLLLADQMISRIEYIHSKN-- 125
Query: 131 YYVHRDVKTSNILLDSNFRAK---IADFGLVK 159
++HRDVK N L+ + I DFGL K
Sbjct: 126 -FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.132 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,403,481
Number of Sequences: 62578
Number of extensions: 387596
Number of successful extensions: 3518
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 222
Number of HSP's that attempted gapping in prelim test: 1032
Number of HSP's gapped (non-prelim): 1117
length of query: 313
length of database: 14,973,337
effective HSP length: 99
effective length of query: 214
effective length of database: 8,778,115
effective search space: 1878516610
effective search space used: 1878516610
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)