Query 041031
Match_columns 313
No_of_seqs 152 out of 1918
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 04:31:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041031.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041031hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9d_A Serine/threonine-protei 100.0 1.7E-57 5.9E-62 397.7 17.3 247 11-292 23-277 (350)
2 4asz_A BDNF/NT-3 growth factor 100.0 4E-57 1.4E-61 389.7 15.9 262 11-302 12-293 (299)
3 4fih_A Serine/threonine-protei 100.0 1.5E-56 5.2E-61 391.1 18.9 245 12-292 74-324 (346)
4 4aoj_A High affinity nerve gro 100.0 3.1E-56 1.1E-60 389.2 20.1 263 11-303 40-324 (329)
5 3omv_A RAF proto-oncogene seri 100.0 4.3E-56 1.5E-60 383.5 20.4 258 11-300 35-302 (307)
6 4g3f_A NF-kappa-beta-inducing 100.0 1.1E-56 3.9E-61 390.7 16.6 256 11-300 57-318 (336)
7 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.5E-56 5E-61 385.7 14.3 246 11-292 31-285 (311)
8 4gt4_A Tyrosine-protein kinase 100.0 7.1E-56 2.4E-60 383.4 18.5 255 11-295 25-303 (308)
9 3hyh_A Carbon catabolite-derep 100.0 1.3E-55 4.5E-60 374.7 17.6 242 11-292 12-263 (275)
10 4fie_A Serine/threonine-protei 100.0 2.4E-55 8.3E-60 392.5 20.0 246 11-292 150-401 (423)
11 3fpq_A Serine/threonine-protei 100.0 1.3E-54 4.6E-59 371.5 19.7 241 15-291 29-282 (290)
12 4ase_A Vascular endothelial gr 100.0 8.1E-55 2.8E-59 383.2 16.4 265 9-302 61-351 (353)
13 3hmm_A TGF-beta receptor type- 100.0 2.6E-54 9E-59 374.1 19.0 269 11-299 2-298 (303)
14 3ubd_A Ribosomal protein S6 ki 100.0 3.1E-55 1.1E-59 377.3 11.2 238 11-286 23-271 (304)
15 4g31_A Eukaryotic translation 100.0 4.7E-53 1.6E-57 364.8 17.0 248 11-291 4-279 (299)
16 4f9c_A Cell division cycle 7-r 100.0 2.1E-51 7.1E-56 363.6 19.7 203 5-218 14-251 (361)
17 4b99_A Mitogen-activated prote 100.0 5.3E-51 1.8E-55 364.7 18.8 263 11-292 53-345 (398)
18 3uto_A Twitchin; kinase, muscl 100.0 5.2E-50 1.8E-54 374.6 21.1 248 10-292 155-411 (573)
19 3v5w_A G-protein coupled recep 100.0 2.2E-49 7.7E-54 369.5 18.0 244 11-291 188-449 (689)
20 3uim_A Brassinosteroid insensi 100.0 3.6E-48 1.2E-52 339.7 16.2 283 2-299 20-312 (326)
21 2qkw_B Protein kinase; three-h 100.0 1.3E-47 4.4E-52 335.6 19.6 282 3-300 30-317 (321)
22 3kul_A Ephrin type-A receptor 100.0 1.6E-47 5.3E-52 335.7 18.7 260 11-303 48-318 (325)
23 4eqm_A Protein kinase; transfe 100.0 5E-48 1.7E-52 334.2 15.2 270 11-312 10-289 (294)
24 4hcu_A Tyrosine-protein kinase 100.0 3.1E-47 1.1E-51 324.9 19.0 254 11-299 9-267 (269)
25 3p86_A Serine/threonine-protei 100.0 3.9E-47 1.3E-51 330.8 19.3 262 8-300 33-300 (309)
26 2nru_A Interleukin-1 receptor- 100.0 6.9E-47 2.4E-51 328.8 20.8 278 2-298 15-306 (307)
27 3fxz_A Serine/threonine-protei 100.0 6.5E-47 2.2E-51 327.7 20.2 247 10-292 18-270 (297)
28 3s95_A LIMK-1, LIM domain kina 100.0 3.4E-46 1.2E-50 325.0 24.3 258 11-299 9-283 (310)
29 2yab_A Death-associated protei 100.0 6.1E-47 2.1E-51 336.0 19.8 247 10-291 10-272 (361)
30 3sxs_A Cytoplasmic tyrosine-pr 100.0 4.8E-47 1.6E-51 323.5 17.9 255 10-299 6-265 (268)
31 3fe3_A MAP/microtubule affinit 100.0 2.2E-47 7.5E-52 334.8 16.2 246 8-292 11-265 (328)
32 3soc_A Activin receptor type-2 100.0 3.2E-47 1.1E-51 333.3 16.0 272 11-299 23-319 (322)
33 3zgw_A Maternal embryonic leuc 100.0 4.6E-47 1.6E-51 334.9 17.0 250 8-294 6-263 (347)
34 3gen_A Tyrosine-protein kinase 100.0 1.2E-46 4.1E-51 323.6 19.2 255 10-299 22-281 (283)
35 1tki_A Titin; serine kinase, m 100.0 5.9E-47 2E-51 331.3 17.4 251 10-294 3-260 (321)
36 2psq_A Fibroblast growth facto 100.0 1.5E-46 5E-51 335.1 20.0 262 11-302 80-368 (370)
37 3ugc_A Tyrosine-protein kinase 100.0 4.9E-47 1.7E-51 328.0 15.6 274 10-300 8-293 (295)
38 2c30_A Serine/threonine-protei 100.0 7.8E-46 2.7E-50 324.3 22.6 258 1-294 24-297 (321)
39 2y0a_A Death-associated protei 100.0 2.8E-46 9.5E-51 327.9 19.7 247 10-292 9-272 (326)
40 3q4u_A Activin receptor type-1 100.0 3.4E-46 1.2E-50 323.4 20.0 260 10-296 6-300 (301)
41 3soa_A Calcium/calmodulin-depe 100.0 4.9E-46 1.7E-50 338.4 20.8 251 8-292 7-268 (444)
42 2bdw_A Hypothetical protein K1 100.0 3.1E-46 1.1E-50 331.9 18.9 249 9-292 26-285 (362)
43 3tki_A Serine/threonine-protei 100.0 5.1E-46 1.8E-50 325.7 19.8 251 10-293 5-263 (323)
44 2qol_A Ephrin receptor; recept 100.0 2.1E-46 7.3E-51 334.3 17.4 257 11-300 44-311 (373)
45 1o6l_A RAC-beta serine/threoni 100.0 7.1E-46 2.4E-50 326.2 19.9 244 11-292 4-261 (337)
46 3vhe_A Vascular endothelial gr 100.0 1.4E-46 4.8E-51 333.8 15.5 270 2-300 12-357 (359)
47 3dtc_A Mitogen-activated prote 100.0 5.1E-46 1.8E-50 317.6 18.2 251 10-296 5-271 (271)
48 3lb7_A RAF proto-oncogene seri 100.0 1.6E-45 5.6E-50 320.3 21.1 259 11-301 35-303 (307)
49 3t9t_A Tyrosine-protein kinase 100.0 5.8E-46 2E-50 316.5 17.8 254 11-299 7-265 (267)
50 4e5w_A Tyrosine-protein kinase 100.0 5.2E-46 1.8E-50 322.4 17.6 269 11-297 20-301 (302)
51 1kob_A Twitchin; kinase, intra 100.0 1.4E-45 4.8E-50 330.0 20.9 249 10-292 49-305 (387)
52 3cbl_A C-FES, proto-oncogene t 100.0 2.3E-46 8E-51 334.7 15.6 254 11-298 113-374 (377)
53 3tt0_A Basic fibroblast growth 100.0 1.3E-45 4.5E-50 330.4 20.1 263 11-303 68-357 (382)
54 1k9a_A Carboxyl-terminal SRC k 100.0 2.2E-45 7.6E-50 335.6 21.9 252 10-299 191-446 (450)
55 3niz_A Rhodanese family protei 100.0 2E-45 6.7E-50 320.4 20.6 264 9-291 18-300 (311)
56 1csn_A Casein kinase-1; phosph 100.0 1.1E-45 3.7E-50 319.8 18.7 264 10-300 8-285 (298)
57 1u59_A Tyrosine-protein kinase 100.0 1.6E-45 5.6E-50 317.2 19.6 258 11-302 8-276 (287)
58 4fr4_A YANK1, serine/threonine 100.0 1.5E-45 5.3E-50 328.9 20.1 245 11-291 14-271 (384)
59 1luf_A Muscle-specific tyrosin 100.0 5.2E-46 1.8E-50 328.1 16.8 263 9-301 44-338 (343)
60 1mqb_A Ephrin type-A receptor 100.0 1.7E-45 5.7E-50 323.8 19.6 261 11-304 43-315 (333)
61 3h4j_B AMPK kdaid, SNF1-like p 100.0 8.3E-46 2.8E-50 325.5 17.6 245 10-294 7-261 (336)
62 1mp8_A Focal adhesion kinase 1 100.0 5.6E-46 1.9E-50 319.2 16.0 256 9-300 12-278 (281)
63 2w4o_A Calcium/calmodulin-depe 100.0 1.6E-45 5.6E-50 325.9 19.4 249 10-292 51-306 (349)
64 3kfa_A Tyrosine-protein kinase 100.0 1.8E-46 6E-51 323.2 12.8 264 5-302 6-275 (288)
65 3mdy_A Bone morphogenetic prot 100.0 4.7E-45 1.6E-49 321.1 22.0 266 8-300 33-333 (337)
66 3c0i_A Peripheral plasma membr 100.0 6.9E-46 2.4E-50 328.5 16.6 251 11-292 23-287 (351)
67 3uc3_A Serine/threonine-protei 100.0 8.3E-46 2.8E-50 329.1 17.1 250 11-294 19-277 (361)
68 2a2a_A Death-associated protei 100.0 2.1E-45 7.1E-50 321.6 19.0 248 10-292 10-273 (321)
69 4dc2_A Protein kinase C IOTA t 100.0 1.6E-45 5.6E-50 329.9 18.7 247 11-286 51-307 (396)
70 2zv2_A Calcium/calmodulin-depe 100.0 2.7E-45 9.3E-50 317.5 19.5 245 10-291 11-292 (298)
71 3txo_A PKC-L, NPKC-ETA, protei 100.0 4.7E-46 1.6E-50 329.4 15.0 245 9-291 20-280 (353)
72 1rjb_A FL cytokine receptor; k 100.0 2.5E-45 8.6E-50 324.0 19.4 265 10-303 43-339 (344)
73 4euu_A Serine/threonine-protei 100.0 1.1E-45 3.9E-50 323.0 17.0 273 11-296 8-307 (319)
74 1fot_A TPK1 delta, CAMP-depend 100.0 3E-45 1E-49 319.9 18.9 240 11-291 5-258 (318)
75 2h34_A Serine/threonine-protei 100.0 2.2E-45 7.7E-50 319.7 18.0 262 9-304 31-302 (309)
76 2eva_A TAK1 kinase - TAB1 chim 100.0 3.6E-45 1.2E-49 318.2 19.0 254 11-301 7-266 (307)
77 3l9p_A Anaplastic lymphoma kin 100.0 1.3E-45 4.5E-50 328.6 16.6 260 11-300 70-347 (367)
78 2izr_A Casein kinase I isoform 100.0 1.3E-45 4.6E-50 324.1 16.2 261 11-299 8-282 (330)
79 3kn6_A Ribosomal protein S6 ki 100.0 8.5E-46 2.9E-50 324.6 14.8 251 12-292 8-271 (325)
80 1xbb_A Tyrosine-protein kinase 100.0 1.2E-45 4.1E-50 318.7 15.5 259 10-303 14-284 (291)
81 2ivs_A Proto-oncogene tyrosine 100.0 2E-45 6.7E-50 320.4 16.8 260 10-299 21-312 (314)
82 4aw2_A Serine/threonine-protei 100.0 1.1E-45 3.9E-50 335.0 15.6 257 4-292 66-339 (437)
83 3o0g_A Cell division protein k 100.0 4.4E-45 1.5E-49 315.3 18.6 262 12-291 2-282 (292)
84 2wqm_A Serine/threonine-protei 100.0 4.7E-45 1.6E-49 317.7 18.8 266 10-305 30-304 (310)
85 4f0f_A Serine/threonine-protei 100.0 1.2E-44 3.9E-49 311.8 21.1 249 11-296 18-287 (287)
86 3kk8_A Calcium/calmodulin depe 100.0 5.8E-45 2E-49 313.1 19.2 249 10-293 4-263 (284)
87 3qup_A Tyrosine-protein kinase 100.0 1.6E-45 5.6E-50 322.4 16.0 261 9-299 20-299 (323)
88 3lxl_A Tyrosine-protein kinase 100.0 1.4E-45 4.9E-50 323.4 15.6 275 11-305 22-310 (327)
89 2xir_A Vascular endothelial gr 100.0 1.8E-45 6.1E-50 321.0 16.1 270 3-301 18-313 (316)
90 3og7_A AKAP9-BRAF fusion prote 100.0 3.5E-45 1.2E-49 315.5 17.5 257 10-298 22-288 (289)
91 3lxp_A Non-receptor tyrosine-p 100.0 6.4E-45 2.2E-49 318.1 19.4 268 12-301 30-313 (318)
92 3v8s_A RHO-associated protein 100.0 8.2E-46 2.8E-50 333.5 14.0 252 6-292 63-330 (410)
93 1t46_A HOMO sapiens V-KIT hard 100.0 3.7E-45 1.3E-49 318.5 17.8 263 10-301 21-310 (313)
94 3qd2_B Eukaryotic translation 100.0 5.4E-45 1.8E-49 319.9 18.8 250 10-292 4-326 (332)
95 1ob3_A PFPK5, cell division co 100.0 4.4E-45 1.5E-49 314.7 17.8 262 12-292 2-281 (288)
96 3g2f_A Bone morphogenetic prot 100.0 2.3E-45 8E-50 323.1 16.3 276 10-299 11-319 (336)
97 1qpc_A LCK kinase; alpha beta 100.0 6.2E-45 2.1E-49 312.3 18.4 259 8-301 9-272 (279)
98 1xjd_A Protein kinase C, theta 100.0 1.7E-45 6E-50 324.6 15.4 246 7-290 12-268 (345)
99 1opk_A P150, C-ABL, proto-onco 100.0 1.9E-45 6.7E-50 339.6 16.0 257 10-300 218-480 (495)
100 3cc6_A Protein tyrosine kinase 100.0 2.4E-45 8.2E-50 315.2 15.5 257 10-302 10-277 (281)
101 4hgt_A Casein kinase I isoform 100.0 7.3E-45 2.5E-49 314.1 18.5 265 9-300 6-282 (296)
102 3poz_A Epidermal growth factor 100.0 4E-45 1.4E-49 320.6 17.1 254 11-299 14-279 (327)
103 1qcf_A Haematopoetic cell kina 100.0 2.4E-45 8.1E-50 335.8 16.2 257 9-300 185-446 (454)
104 3a8x_A Protein kinase C IOTA t 100.0 6E-45 2.1E-49 321.5 18.2 247 11-286 8-264 (345)
105 3ork_A Serine/threonine protei 100.0 3E-46 1E-50 325.5 9.7 258 10-298 10-281 (311)
106 3hko_A Calcium/calmodulin-depe 100.0 7E-45 2.4E-49 321.2 18.5 261 6-292 20-331 (345)
107 3kex_A Receptor tyrosine-prote 100.0 2.9E-45 1E-49 321.2 15.9 255 11-300 12-278 (325)
108 1byg_A CSK, protein (C-termina 100.0 2.2E-45 7.6E-50 314.9 14.7 253 10-300 19-275 (278)
109 1p4o_A Insulin-like growth fac 100.0 1.4E-45 4.7E-50 322.7 13.6 267 2-298 15-299 (322)
110 1rdq_E PKA C-alpha, CAMP-depen 100.0 6.1E-45 2.1E-49 322.0 17.9 241 11-292 40-294 (350)
111 3llt_A Serine/threonine kinase 100.0 3.4E-45 1.2E-49 325.1 16.2 204 2-218 25-263 (360)
112 3kmu_A ILK, integrin-linked ki 100.0 1E-44 3.5E-49 309.2 18.6 251 10-297 8-269 (271)
113 3gxj_A TGF-beta receptor type- 100.0 8.9E-47 3E-51 327.2 5.9 263 11-300 2-299 (303)
114 1b6c_B TGF-B superfamily recep 100.0 1.2E-44 4E-49 319.3 19.5 265 8-299 38-337 (342)
115 3g33_A Cell division protein k 100.0 1.3E-44 4.5E-49 314.7 19.5 264 10-292 7-297 (308)
116 3f66_A Hepatocyte growth facto 100.0 1E-44 3.4E-49 313.9 18.5 259 10-301 23-294 (298)
117 1nxk_A MAP kinase-activated pr 100.0 2.9E-44 9.8E-49 323.4 21.8 254 10-294 59-324 (400)
118 2x4f_A Myosin light chain kina 100.0 5.6E-45 1.9E-49 325.0 17.0 241 17-291 94-342 (373)
119 2eue_A Carbon catabolite derep 100.0 5.9E-45 2E-49 311.8 16.4 242 11-292 12-263 (275)
120 3fdn_A Serine/threonine-protei 100.0 6.5E-45 2.2E-49 312.2 16.7 245 10-294 7-260 (279)
121 3lm5_A Serine/threonine-protei 100.0 1.4E-44 4.9E-49 317.1 19.0 256 4-292 20-288 (327)
122 3f3z_A Calcium/calmodulin-depe 100.0 7.5E-45 2.6E-49 311.4 16.6 247 10-292 7-262 (277)
123 3gni_B Strad alpha; kinase fol 100.0 1.1E-44 3.8E-49 325.2 18.5 277 10-292 23-334 (389)
124 3bhy_A Death-associated protei 100.0 9.3E-45 3.2E-49 311.7 17.2 253 10-298 3-274 (283)
125 2qr7_A Ribosomal protein S6 ki 100.0 7.6E-45 2.6E-49 320.5 16.9 255 9-295 19-281 (342)
126 3lzb_A Epidermal growth factor 100.0 9.1E-45 3.1E-49 318.3 17.3 255 11-300 14-280 (327)
127 2pvf_A Fibroblast growth facto 100.0 1.1E-44 3.9E-49 318.6 17.8 263 10-302 33-322 (334)
128 2y94_A 5'-AMP-activated protei 100.0 1.9E-44 6.5E-49 330.1 19.9 244 10-292 14-267 (476)
129 2yex_A Serine/threonine-protei 100.0 3.1E-44 1.1E-48 307.2 20.0 251 9-292 4-262 (276)
130 2vd5_A DMPK protein; serine/th 100.0 2.8E-45 9.5E-50 330.2 14.0 256 4-292 53-328 (412)
131 2pmi_A Negative RE, cyclin-dep 100.0 1.4E-44 4.7E-49 315.9 18.0 266 11-292 4-294 (317)
132 4agu_A Cyclin-dependent kinase 100.0 1.1E-44 3.9E-49 315.3 17.4 263 11-292 2-285 (311)
133 3pls_A Macrophage-stimulating 100.0 2.8E-44 9.6E-49 310.9 19.7 260 13-304 22-293 (298)
134 3is5_A Calcium-dependent prote 100.0 9E-45 3.1E-49 312.4 16.5 249 10-291 20-278 (285)
135 1fvr_A Tyrosine-protein kinase 100.0 1.4E-44 4.7E-49 317.2 17.9 261 11-304 24-306 (327)
136 3cok_A Serine/threonine-protei 100.0 2.5E-44 8.5E-49 308.3 19.0 248 8-292 7-263 (278)
137 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 5.2E-45 1.8E-49 333.3 15.6 256 10-300 182-442 (452)
138 2i0e_A Protein kinase C-beta I 100.0 8.9E-45 3E-49 321.1 16.6 245 9-291 17-276 (353)
139 2jam_A Calcium/calmodulin-depe 100.0 1.7E-44 6E-49 313.3 18.0 248 9-292 6-262 (304)
140 3brb_A Proto-oncogene tyrosine 100.0 2.4E-44 8.2E-49 313.7 18.7 264 8-301 30-311 (313)
141 3i6u_A CDS1, serine/threonine- 100.0 2.8E-44 9.6E-49 325.4 19.4 250 8-292 131-400 (419)
142 3dls_A PAS domain-containing s 100.0 7.9E-45 2.7E-49 319.7 15.3 238 10-292 22-275 (335)
143 3mwu_A Calmodulin-domain prote 100.0 3.1E-44 1.1E-48 331.2 19.9 248 10-293 20-278 (486)
144 3mtl_A Cell division protein k 100.0 7.6E-45 2.6E-49 318.5 14.8 262 11-292 1-282 (324)
145 3nyv_A Calmodulin-domain prote 100.0 5.3E-45 1.8E-49 336.3 14.5 249 10-294 24-284 (484)
146 3a62_A Ribosomal protein S6 ki 100.0 1.9E-44 6.6E-49 316.3 17.3 244 10-291 15-276 (327)
147 3uzp_A CKI-delta, CKID, casein 100.0 3.5E-44 1.2E-48 310.0 18.7 264 10-300 7-282 (296)
148 2y7j_A Phosphorylase B kinase 100.0 3.1E-44 1.1E-48 319.5 18.6 250 7-291 89-359 (365)
149 3op5_A Serine/threonine-protei 100.0 9.2E-45 3.2E-49 322.9 15.2 265 11-299 34-330 (364)
150 4eut_A Serine/threonine-protei 100.0 2.8E-44 9.6E-49 323.3 18.4 272 11-299 8-310 (396)
151 2w1i_A JAK2; chromosomal rearr 100.0 1.7E-44 5.7E-49 316.5 16.3 269 11-299 40-323 (326)
152 3lij_A Calcium/calmodulin depe 100.0 3.2E-44 1.1E-48 331.8 18.6 247 10-292 35-292 (494)
153 4fvq_A Tyrosine-protein kinase 100.0 1.5E-44 5.2E-49 311.3 15.3 249 11-300 7-277 (289)
154 2a19_B Interferon-induced, dou 100.0 3.6E-44 1.2E-48 308.0 17.5 251 9-301 8-277 (284)
155 1phk_A Phosphorylase kinase; g 100.0 6.3E-44 2.1E-48 308.8 19.0 251 6-291 11-283 (298)
156 2v62_A Serine/threonine-protei 100.0 7.7E-45 2.6E-49 321.2 13.3 264 11-299 36-329 (345)
157 2vgo_A Serine/threonine-protei 100.0 6.4E-44 2.2E-48 306.8 18.7 244 10-293 12-264 (284)
158 2ozo_A Tyrosine-protein kinase 100.0 5E-44 1.7E-48 337.6 19.7 254 14-301 337-601 (613)
159 3q5i_A Protein kinase; CDPK, m 100.0 3.6E-44 1.2E-48 332.2 18.1 250 9-294 33-304 (504)
160 3a7i_A MST3 kinase, serine/thr 100.0 1.1E-43 3.8E-48 308.1 20.0 249 10-296 20-275 (303)
161 2ycf_A Serine/threonine-protei 100.0 5.6E-44 1.9E-48 312.7 18.3 248 9-291 7-274 (322)
162 1vzo_A Ribosomal protein S6 ki 100.0 1.3E-44 4.3E-49 320.9 14.3 251 11-294 53-324 (355)
163 3dbq_A Dual specificity protei 100.0 2.4E-44 8.3E-49 317.7 16.0 249 10-294 7-276 (343)
164 3p1a_A MYT1 kinase, membrane-a 100.0 5E-44 1.7E-48 311.5 17.7 238 12-291 57-304 (311)
165 3com_A Serine/threonine-protei 100.0 1.4E-43 4.6E-48 309.0 20.4 250 9-292 26-279 (314)
166 3oz6_A Mitogen-activated prote 100.0 2.5E-44 8.4E-49 322.9 16.0 267 8-292 5-329 (388)
167 3c1x_A Hepatocyte growth facto 100.0 1.9E-44 6.5E-49 321.5 15.2 258 13-303 90-360 (373)
168 3nsz_A CK II alpha, casein kin 100.0 3.3E-43 1.1E-47 308.6 22.9 258 11-292 35-320 (330)
169 3e7e_A HBUB1, BUB1A, mitotic c 100.0 5.1E-44 1.8E-48 318.2 17.9 255 11-300 64-341 (365)
170 2ac3_A MAP kinase-interacting 100.0 3.1E-44 1E-48 313.3 16.2 265 11-292 11-296 (316)
171 3mi9_A Cell division protein k 100.0 1E-43 3.6E-48 314.6 19.8 266 10-292 15-312 (351)
172 1u46_A ACK-1, activated CDC42 100.0 1E-44 3.6E-49 312.5 13.0 258 11-301 17-287 (291)
173 2buj_A Serine/threonine-protei 100.0 1.6E-44 5.5E-49 315.2 14.2 266 11-304 28-312 (317)
174 4ejn_A RAC-alpha serine/threon 100.0 1.5E-44 5.2E-49 329.9 14.3 244 10-291 146-404 (446)
175 2i1m_A Macrophage colony-stimu 100.0 3.1E-44 1.1E-48 315.6 15.7 264 8-300 42-328 (333)
176 1u5q_A Serine/threonine protei 100.0 4.5E-44 1.5E-48 316.4 16.6 244 11-294 53-308 (348)
177 2acx_A G protein-coupled recep 100.0 4.5E-44 1.5E-48 332.4 17.4 250 10-292 182-445 (576)
178 2r5t_A Serine/threonine-protei 100.0 1.4E-44 4.7E-49 322.1 13.2 246 10-293 36-291 (373)
179 2zmd_A Dual specificity protei 100.0 6.4E-44 2.2E-48 320.1 17.5 246 12-293 56-322 (390)
180 3ttj_A Mitogen-activated prote 100.0 7.1E-44 2.4E-48 326.4 17.8 260 10-292 60-356 (464)
181 3gbz_A Kinase, CMGC CDK; ssgci 100.0 3.7E-44 1.3E-48 314.8 15.2 265 7-291 29-318 (329)
182 2yfx_A Tyrosine-protein kinase 100.0 6.5E-44 2.2E-48 312.9 16.6 261 10-300 28-306 (327)
183 4fl3_A Tyrosine-protein kinase 100.0 4.6E-44 1.6E-48 338.8 16.6 247 18-299 375-632 (635)
184 1ua2_A CAK, cell division prot 100.0 9.5E-44 3.3E-48 314.3 17.3 269 6-293 4-293 (346)
185 2h8h_A Proto-oncogene tyrosine 100.0 2.9E-44 9.9E-49 334.6 14.6 257 9-300 264-525 (535)
186 2rku_A Serine/threonine-protei 100.0 9.9E-44 3.4E-48 307.1 17.0 247 10-294 13-268 (294)
187 2jii_A Serine/threonine-protei 100.0 2.4E-44 8.2E-49 318.8 13.4 265 11-300 41-338 (352)
188 4aaa_A Cyclin-dependent kinase 100.0 2.8E-44 9.7E-49 315.7 13.8 264 10-292 23-307 (331)
189 2pml_X PFPK7, Ser/Thr protein 100.0 1.8E-43 6E-48 312.6 18.9 262 11-291 30-322 (348)
190 2h6d_A 5'-AMP-activated protei 100.0 1.5E-43 5E-48 303.2 17.6 244 10-292 9-262 (276)
191 2w5a_A Serine/threonine-protei 100.0 1.4E-44 4.9E-49 309.9 11.1 257 9-295 3-271 (279)
192 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.6E-43 5.4E-48 327.8 18.8 251 11-291 184-448 (543)
193 3eqc_A Dual specificity mitoge 100.0 4.6E-44 1.6E-48 317.9 14.4 268 11-293 32-326 (360)
194 3fme_A Dual specificity mitoge 100.0 9.4E-44 3.2E-48 306.4 15.6 251 9-292 4-267 (290)
195 2x7f_A TRAF2 and NCK-interacti 100.0 1.1E-43 3.9E-48 311.0 16.3 256 3-292 15-287 (326)
196 1cm8_A Phosphorylated MAP kina 100.0 2.9E-43 1E-47 313.4 19.2 259 10-292 23-308 (367)
197 2owb_A Serine/threonine-protei 100.0 1E-43 3.4E-48 312.8 15.7 246 10-293 39-293 (335)
198 3n9x_A Phosphotransferase; mal 100.0 8.9E-44 3E-48 323.4 15.6 197 10-215 24-253 (432)
199 3rp9_A Mitogen-activated prote 100.0 9.1E-44 3.1E-48 325.8 15.6 273 11-292 52-397 (458)
200 3qyz_A Mitogen-activated prote 100.0 1.3E-43 4.5E-48 315.5 16.1 265 10-292 25-314 (364)
201 1t4h_A Serine/threonine-protei 100.0 5.6E-43 1.9E-47 301.8 19.3 244 13-292 27-283 (290)
202 2xrw_A Mitogen-activated prote 100.0 8.5E-43 2.9E-47 311.0 20.6 262 10-294 23-321 (371)
203 3pg1_A Mitogen-activated prote 100.0 4.3E-43 1.5E-47 311.8 18.6 269 4-292 14-317 (362)
204 3rgf_A Cyclin-dependent kinase 100.0 1.8E-43 6E-48 319.0 16.3 281 10-294 18-336 (405)
205 3kvw_A DYRK2, dual specificity 100.0 3.1E-43 1E-47 319.4 17.7 196 10-218 95-303 (429)
206 2j7t_A Serine/threonine-protei 100.0 3.3E-43 1.1E-47 304.8 16.9 248 10-291 17-275 (302)
207 1x8b_A WEE1HU, WEE1-like prote 100.0 1.7E-43 5.7E-48 304.2 14.9 243 10-292 9-280 (289)
208 2clq_A Mitogen-activated prote 100.0 9.3E-43 3.2E-47 300.9 19.1 249 12-292 22-279 (295)
209 1wak_A Serine/threonine-protei 100.0 1.2E-42 4E-47 312.4 20.4 265 11-291 36-391 (397)
210 3sv0_A Casein kinase I-like; t 100.0 4.6E-43 1.6E-47 321.5 17.9 263 10-299 5-279 (483)
211 2wei_A Calmodulin-domain prote 100.0 5E-43 1.7E-47 301.7 17.1 248 9-292 19-277 (287)
212 2r3i_A Cell division protein k 100.0 9.1E-43 3.1E-47 301.6 18.3 263 11-291 2-283 (299)
213 3pfq_A PKC-B, PKC-beta, protei 100.0 5.8E-43 2E-47 333.4 18.4 239 10-286 339-587 (674)
214 3eb0_A Putative uncharacterize 100.0 2.8E-43 9.5E-48 315.5 15.1 267 7-291 2-321 (383)
215 2j0j_A Focal adhesion kinase 1 100.0 3.3E-43 1.1E-47 334.1 15.5 257 8-300 386-653 (656)
216 3an0_A Dual specificity mitoge 100.0 1.2E-42 4.2E-47 306.4 17.9 253 9-294 48-313 (340)
217 3ll6_A Cyclin G-associated kin 100.0 2E-43 6.9E-48 310.5 12.9 260 9-301 25-311 (337)
218 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.4E-43 4.8E-48 309.4 11.8 260 8-301 29-305 (319)
219 2vwi_A Serine/threonine-protei 100.0 1.9E-43 6.3E-48 306.3 12.1 264 9-292 12-288 (303)
220 2fst_X Mitogen-activated prote 100.0 4.5E-43 1.5E-47 312.1 14.6 259 10-292 27-312 (367)
221 3cek_A Dual specificity protei 100.0 3.2E-43 1.1E-47 306.6 13.4 257 2-294 18-295 (313)
222 2wtk_C Serine/threonine-protei 100.0 2.1E-42 7.2E-47 300.1 18.4 251 9-294 2-266 (305)
223 2i6l_A Mitogen-activated prote 100.0 9.2E-43 3.2E-47 304.1 16.1 265 10-292 9-306 (320)
224 1z57_A Dual specificity protei 100.0 2.5E-42 8.5E-47 303.6 18.9 261 10-292 12-329 (339)
225 3p23_A Serine/threonine-protei 100.0 1.5E-42 5.3E-47 314.8 17.6 248 12-291 24-283 (432)
226 1zy4_A Serine/threonine-protei 100.0 1.1E-42 3.6E-47 301.3 15.5 251 10-292 4-284 (303)
227 3byv_A Rhoptry kinase; malaria 100.0 5.3E-44 1.8E-48 319.5 7.2 239 11-291 72-359 (377)
228 3e3p_A Protein kinase, putativ 100.0 3.7E-42 1.3E-46 305.5 19.0 270 6-292 17-315 (360)
229 3q60_A ROP5B; pseudokinase, tr 100.0 2.8E-43 9.7E-48 314.1 11.7 247 12-291 62-352 (371)
230 3aln_A Dual specificity mitoge 100.0 8.9E-43 3E-47 305.6 13.6 254 11-294 21-288 (327)
231 2vx3_A Dual specificity tyrosi 100.0 8.6E-42 2.9E-46 305.7 19.9 197 9-218 51-262 (382)
232 1blx_A Cyclin-dependent kinase 100.0 5.9E-42 2E-46 300.0 18.4 264 9-291 8-296 (326)
233 3fhr_A MAP kinase-activated pr 100.0 4E-42 1.4E-46 302.6 17.3 252 10-293 26-289 (336)
234 4exu_A Mitogen-activated prote 100.0 2.7E-42 9.4E-47 307.7 16.3 258 10-292 40-324 (371)
235 2b9h_A MAP kinase FUS3, mitoge 100.0 4.5E-42 1.6E-46 304.1 17.0 264 10-292 9-306 (353)
236 3coi_A Mitogen-activated prote 100.0 8.9E-42 3E-46 302.4 18.8 257 11-292 23-306 (353)
237 2eu9_A Dual specificity protei 100.0 1.2E-41 4.1E-46 301.3 19.4 261 10-292 17-334 (355)
238 2rio_A Serine/threonine-protei 100.0 8.6E-42 2.9E-46 310.4 18.3 258 6-291 8-295 (434)
239 1j1b_A Glycogen synthase kinas 100.0 3.7E-42 1.3E-46 311.6 15.6 263 12-292 54-337 (420)
240 1q8y_A SR protein kinase; tran 100.0 2.1E-41 7.2E-46 302.0 18.9 267 11-292 18-334 (373)
241 3a99_A Proto-oncogene serine/t 100.0 2E-42 6.8E-47 302.6 11.8 240 7-292 38-294 (320)
242 4e7w_A Glycogen synthase kinas 100.0 3.2E-42 1.1E-46 309.6 13.4 264 11-292 39-322 (394)
243 2dyl_A Dual specificity mitoge 100.0 1.3E-41 4.5E-46 296.8 14.9 248 10-292 23-284 (318)
244 2iwi_A Serine/threonine-protei 100.0 1.4E-41 5E-46 295.9 12.8 240 7-292 26-284 (312)
245 3uqc_A Probable conserved tran 100.0 1.9E-40 6.4E-45 285.5 16.1 229 11-303 30-270 (286)
246 3m2w_A MAP kinase-activated pr 100.0 9.9E-40 3.4E-44 282.8 18.5 228 10-293 15-258 (299)
247 3qa8_A MGC80376 protein; kinas 100.0 2E-40 6.9E-45 311.2 14.7 271 8-299 10-310 (676)
248 2pzi_A Probable serine/threoni 100.0 3.6E-39 1.2E-43 308.6 17.1 236 11-298 79-328 (681)
249 3dzo_A Rhoptry kinase domain; 100.0 3.4E-39 1.2E-43 291.5 10.5 238 12-291 78-363 (413)
250 2vuw_A Serine/threonine-protei 100.0 7.5E-39 2.6E-43 281.7 10.6 235 11-290 19-329 (336)
251 4azs_A Methyltransferase WBDD; 100.0 2.3E-31 7.8E-36 248.7 5.0 180 20-214 242-438 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 1.2E-27 4E-32 222.4 8.8 182 15-214 339-538 (540)
253 1zar_A RIO2 kinase; serine kin 99.9 3.4E-24 1.2E-28 183.4 9.0 136 6-160 84-241 (282)
254 1zth_A RIO1 serine protein kin 99.8 4.1E-20 1.4E-24 156.1 11.4 132 14-162 49-220 (258)
255 4gyi_A RIO2 kinase; protein ki 99.7 7E-18 2.4E-22 148.5 9.1 135 12-162 95-266 (397)
256 3tm0_A Aminoglycoside 3'-phosp 99.6 2.3E-14 7.9E-19 120.9 12.3 145 6-160 8-213 (263)
257 1nd4_A Aminoglycoside 3'-phosp 99.3 8E-12 2.7E-16 104.9 11.0 141 7-160 15-214 (264)
258 3dxp_A Putative acyl-COA dehyd 99.3 3E-11 1E-15 106.5 11.9 142 14-162 40-250 (359)
259 3sg8_A APH(2'')-ID; antibiotic 99.2 3.5E-11 1.2E-15 103.6 7.9 185 17-215 25-288 (304)
260 3r70_A Aminoglycoside phosphot 98.9 8.8E-09 3E-13 89.2 12.6 136 13-162 38-239 (320)
261 4gkh_A Aminoglycoside 3'-phosp 98.9 1.7E-08 5.9E-13 85.1 12.5 140 11-160 24-223 (272)
262 3ovc_A Hygromycin-B 4-O-kinase 98.7 2E-07 6.7E-12 82.1 12.2 78 12-91 41-122 (362)
263 3tdw_A Gentamicin resistance p 98.6 3.5E-07 1.2E-11 78.5 12.7 134 17-160 24-224 (306)
264 3ats_A Putative uncharacterize 98.6 2.6E-07 9E-12 81.0 11.7 77 16-92 24-122 (357)
265 3d1u_A Putative fructosamine-3 98.4 1.7E-06 5.9E-11 73.5 11.6 74 13-90 16-97 (288)
266 3jr1_A Putative fructosamine-3 98.4 2.8E-06 9.5E-11 73.0 12.1 76 15-90 39-118 (312)
267 2q83_A YTAA protein; 2635576, 98.3 8.2E-06 2.8E-10 70.8 12.6 73 17-90 37-118 (346)
268 2yle_A Protein spire homolog 1 98.1 5.5E-06 1.9E-10 66.2 7.1 102 88-212 33-134 (229)
269 2olc_A MTR kinase, methylthior 98.1 1.3E-05 4.4E-10 71.3 10.3 71 16-88 34-120 (397)
270 2ppq_A HSK, HK, homoserine kin 98.1 9.4E-05 3.2E-09 63.6 15.0 159 2-160 7-217 (322)
271 2pyw_A Uncharacterized protein 98.0 3.5E-05 1.2E-09 69.1 10.3 71 15-87 37-122 (420)
272 3dxq_A Choline/ethanolamine ki 97.9 9.1E-05 3.1E-09 63.1 11.5 72 14-91 20-96 (301)
273 3f7w_A Putative fructosamine-3 97.9 0.0002 6.7E-09 60.6 13.1 76 11-90 14-97 (288)
274 3csv_A Aminoglycoside phosphot 97.9 5.7E-05 2E-09 65.4 9.5 145 17-163 23-220 (333)
275 1zyl_A Hypothetical protein YI 97.7 0.00069 2.4E-08 58.3 13.5 87 3-90 12-114 (328)
276 1nw1_A Choline kinase (49.2 KD 97.7 0.0002 7E-09 64.2 9.9 71 16-90 77-159 (429)
277 3feg_A Choline/ethanolamine ki 97.5 0.00049 1.7E-08 60.6 9.6 140 17-160 55-254 (379)
278 2qg7_A Ethanolamine kinase PV0 97.5 0.0011 3.6E-08 60.0 11.9 71 16-90 112-188 (458)
279 3c5i_A Choline kinase; choline 97.4 0.00082 2.8E-08 58.9 9.9 70 17-90 38-121 (369)
280 3i1a_A Spectinomycin phosphotr 97.4 0.0011 3.6E-08 57.6 10.4 71 17-90 26-108 (339)
281 3f2s_A CK, chetk-alpha, cholin 96.9 0.0071 2.4E-07 53.5 10.8 139 17-159 57-279 (401)
282 3mes_A Choline kinase; malaria 96.8 0.0049 1.7E-07 55.0 9.3 71 16-90 74-157 (424)
283 3g15_A CK, chetk-alpha, cholin 95.7 0.064 2.2E-06 47.4 10.0 29 132-160 246-280 (401)
284 4ann_A ESSB; membrane protein, 95.1 0.052 1.8E-06 43.3 6.7 124 53-215 35-158 (215)
285 4ano_A ESSB; membrane protein, 93.5 0.14 4.7E-06 41.0 5.8 91 54-159 41-132 (219)
286 3cxl_A N-chimerin; SH2, RHO-GA 71.5 0.73 2.5E-05 41.5 -0.3 55 16-73 146-214 (463)
287 1cja_A Protein (actin-fragmin 61.5 38 0.0013 28.8 8.2 80 76-162 155-239 (342)
288 3eps_A Isocitrate dehydrogenas 49.3 1.1E+02 0.0038 27.8 9.5 56 105-163 429-484 (578)
289 2x6h_A GH13170P, VPS34, phosph 30.9 28 0.00096 32.8 2.9 25 135-159 551-575 (696)
290 1k4u_P Phagocyte NADPH oxidase 28.4 22 0.00074 18.4 0.9 14 282-295 9-22 (32)
291 2fq3_A Transcription regulator 28.1 1.3E+02 0.0043 20.6 5.1 46 248-293 32-77 (104)
292 3bpy_A FORK head domain, forkh 27.1 38 0.0013 22.2 2.3 30 269-298 11-40 (85)
293 1kq8_A HFH-1, hepatocyte nucle 24.7 61 0.0021 22.0 3.0 29 270-298 9-37 (100)
294 2ybx_A Phosphatidylinositol-5- 24.6 84 0.0029 27.3 4.6 108 21-128 114-259 (394)
295 1vtn_C HNF-3/FORK head DNA-rec 21.9 63 0.0022 22.0 2.6 30 269-298 9-38 (102)
296 2gk9_A Phosphatidylinositol-4- 21.0 1.5E+02 0.0051 25.7 5.4 65 22-87 105-179 (392)
297 2hdc_A Protein (transcription 20.7 67 0.0023 21.7 2.5 30 269-298 8-37 (97)
298 2a07_F Forkhead box protein P2 20.3 71 0.0024 21.4 2.6 30 269-298 9-38 (93)
299 3l2c_A Forkhead box protein O4 20.3 60 0.002 22.5 2.3 31 268-298 29-59 (110)
300 2y3a_A Phosphatidylinositol-4, 20.3 56 0.0019 32.6 2.9 25 135-159 940-964 (1092)
No 1
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.7e-57 Score=397.65 Aligned_cols=247 Identities=24% Similarity=0.399 Sum_probs=201.9
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVY 82 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~ 82 (313)
.++|+++++||+|+||.||+|+++ ++.||||++.... .+.+.+|+++++.+ |||||++++++.+.+.+|+||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 468999999999999999999987 8899999986542 34578999999999 999999999999999999999
Q ss_pred eecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccccccc
Q 041031 83 EYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLE 162 (313)
Q Consensus 83 e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~ 162 (313)
||++||+|.+++.. .....+++..++.++.|++.||.|||+++ |+||||||+|||++++|.+||+|||++....
T Consensus 103 Ey~~gg~L~~~i~~---~~~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 176 (350)
T 4b9d_A 103 DYCEGGDLFKRINA---QKGVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLN 176 (350)
T ss_dssp ECCTTCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCC
T ss_pred eCCCCCcHHHHHHH---cCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeec
Confidence 99999999999952 23356789999999999999999999999 9999999999999999999999999998765
Q ss_pred CChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcCc
Q 041031 163 HSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDT 242 (313)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (313)
.... ......||+.|+|||++.+..|+.++|||||||++|+|+||+.||.+....
T Consensus 177 ~~~~---~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~---------------------- 231 (350)
T 4b9d_A 177 STVE---LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK---------------------- 231 (350)
T ss_dssp HHHH---HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH----------------------
T ss_pred CCcc---cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH----------------------
Confidence 4321 223357999999999999999999999999999999999999999754321
Q ss_pred HHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 243 KDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
+....+.. ..........+..+.+||.+||+.||++|||+.|+++.
T Consensus 232 -~~~~~i~~---~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 232 -NLVLKIIS---GSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp -HHHHHHHH---TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -HHHHHHHc---CCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11112211 11222233456678999999999999999999999863
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=4e-57 Score=389.69 Aligned_cols=262 Identities=25% Similarity=0.407 Sum_probs=214.4
Q ss_pred hcCccccceeccCCeEEEEEeEEC-------CcceEEEeccccc---cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR-------GKNAAIKQMKNTK---SKEFSSELKILCKV-HSNLIELIGYAAGGDSLF 79 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~-------~~~~aiK~~~~~~---~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~ 79 (313)
.++|.+.++||+|+||.||+|++. +..||||.++... .+.+.+|+++|+++ |||||++++++.+.+.++
T Consensus 12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 91 (299)
T 4asz_A 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 91 (299)
T ss_dssp GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence 468999999999999999999874 5679999997654 34588999999999 999999999999999999
Q ss_pred EEEeecCCCChhhhhcCCC--------CCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEE
Q 041031 80 LVYEYAQNGALSDHLHWPS--------VKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAK 151 (313)
Q Consensus 80 lv~e~~~~~~L~~~l~~~~--------~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~ 151 (313)
+||||+++|+|.+++.... ......+++..++.++.|++.||+|||+++ |+||||||+|||+++++.+|
T Consensus 92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~K 168 (299)
T 4asz_A 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVK 168 (299)
T ss_dssp EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEE
Confidence 9999999999999995322 123457999999999999999999999999 99999999999999999999
Q ss_pred EeeccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchh
Q 041031 152 IADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRS 230 (313)
Q Consensus 152 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~ 230 (313)
|+|||++........ ........+|+.|+|||++.+..++.++|||||||++|||+| |+.||.+....
T Consensus 169 i~DFGla~~~~~~~~-~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~---------- 237 (299)
T 4asz_A 169 IGDFGMSRDVYSTDY-YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN---------- 237 (299)
T ss_dssp ECCCSCHHHHTGGGC-EEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH----------
T ss_pred ECCcccceecCCCCc-eeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH----------
Confidence 999999976543221 112223468999999999999999999999999999999999 89999764321
Q ss_pred HHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcccc
Q 041031 231 LVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSKE 302 (313)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~ 302 (313)
+....+..... ...+..++..+.+|+.+||+.||++|||+.+|.+.|+.+...++.
T Consensus 238 -------------~~~~~i~~~~~---~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~p~ 293 (299)
T 4asz_A 238 -------------EVIECITQGRV---LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASPV 293 (299)
T ss_dssp -------------HHHHHHHHTCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCC
T ss_pred -------------HHHHHHHcCCC---CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCCc
Confidence 22222222211 122345667899999999999999999999999999998876654
No 3
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.5e-56 Score=391.09 Aligned_cols=245 Identities=24% Similarity=0.396 Sum_probs=208.2
Q ss_pred cCccccceeccCCeEEEEEeEEC--CcceEEEecccc---ccHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEeec
Q 041031 12 SNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT---KSKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYEYA 85 (313)
Q Consensus 12 ~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~---~~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e~~ 85 (313)
+.|++.++||+|+||.||+|.++ |+.||||++... ..+.+.+|+++|+.+ |||||++++++.+.+.+||||||+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 56999999999999999999997 889999998643 355688999999999 999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccccCCh
Q 041031 86 QNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSP 165 (313)
Q Consensus 86 ~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~~~~ 165 (313)
+||+|.+++. ...+++..++.++.|++.||+|||+++ |+||||||+|||++.+|.+||+|||++.......
T Consensus 154 ~gg~L~~~l~------~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 224 (346)
T 4fih_A 154 EGGALTDIVT------HTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 224 (346)
T ss_dssp TTEEHHHHHH------HSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSS
T ss_pred CCCcHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCCC
Confidence 9999999984 245899999999999999999999999 9999999999999999999999999998765432
Q ss_pred hhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcCcHHH
Q 041031 166 EIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDF 245 (313)
Q Consensus 166 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (313)
.......||+.|+|||++.+..|+.++|||||||++|+|++|..||.+.... +.
T Consensus 225 ---~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-----------------------~~ 278 (346)
T 4fih_A 225 ---PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-----------------------KA 278 (346)
T ss_dssp ---CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----------------------HH
T ss_pred ---CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-----------------------HH
Confidence 1233457999999999999999999999999999999999999999754321 22
Q ss_pred HHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 246 MAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 246 ~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
...+.....+.+. .....+..+.+||.+||..||++|||+.|+++.
T Consensus 279 ~~~i~~~~~~~~~-~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 279 MKMIRDNLPPRLK-NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp HHHHHHSSCCCCS-CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHcCCCCCCC-ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 2233332222222 233456788999999999999999999999874
No 4
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.1e-56 Score=389.16 Aligned_cols=263 Identities=24% Similarity=0.437 Sum_probs=209.1
Q ss_pred hcCccccceeccCCeEEEEEeEEC-------CcceEEEeccccc---cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR-------GKNAAIKQMKNTK---SKEFSSELKILCKV-HSNLIELIGYAAGGDSLF 79 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~-------~~~~aiK~~~~~~---~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~ 79 (313)
.++|.+.++||+|+||.||+|+++ +..||||.++... .+.+.+|+++|+++ |||||++++++.+.+.++
T Consensus 40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 119 (329)
T 4aoj_A 40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL 119 (329)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 357888999999999999999874 5679999997654 34588999999999 999999999999999999
Q ss_pred EEEeecCCCChhhhhcCCCC----------CCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCc
Q 041031 80 LVYEYAQNGALSDHLHWPSV----------KGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFR 149 (313)
Q Consensus 80 lv~e~~~~~~L~~~l~~~~~----------~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~ 149 (313)
+||||+++|+|.+++..... ....++++..++.++.|++.||+|||+++ |+||||||+|||+++++.
T Consensus 120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~ 196 (329)
T 4aoj_A 120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLV 196 (329)
T ss_dssp EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCc
Confidence 99999999999999864321 12357899999999999999999999999 999999999999999999
Q ss_pred EEEeeccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccc
Q 041031 150 AKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEH 228 (313)
Q Consensus 150 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~ 228 (313)
+||+|||++........ ........+|+.|+|||++.+..++.++|||||||++|||+| |+.||......
T Consensus 197 ~Ki~DFGla~~~~~~~~-~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~-------- 267 (329)
T 4aoj_A 197 VKIGDFGMSRDIYSTDY-YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT-------- 267 (329)
T ss_dssp EEECCCC-----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH--------
T ss_pred EEEcccccceeccCCCc-ceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH--------
Confidence 99999999986543322 122234568999999999999999999999999999999999 89999754331
Q ss_pred hhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhccccc
Q 041031 229 RSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSKEW 303 (313)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~~ 303 (313)
+....+....... ....++..+.+|+.+||+.||++|||+.||+++|+.+....+..
T Consensus 268 ---------------~~~~~i~~g~~~~---~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~pp~~ 324 (329)
T 4aoj_A 268 ---------------EAIDCITQGRELE---RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPVY 324 (329)
T ss_dssp ---------------HHHHHHHHTCCCC---CCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSCC--
T ss_pred ---------------HHHHHHHcCCCCC---CcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCCccc
Confidence 2222232222222 23355678999999999999999999999999999998766544
No 5
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=4.3e-56 Score=383.46 Aligned_cols=258 Identities=30% Similarity=0.522 Sum_probs=207.4
Q ss_pred hcCccccceeccCCeEEEEEeEECCcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEee
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYEY 84 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e~ 84 (313)
.+++.+.++||+|+||.||+|++++ .||||+++... .+.+.+|+.+++++ |||||++++++.+ +.+++||||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS-EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC-cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 4678889999999999999998875 58999987432 34578999999999 9999999998865 568999999
Q ss_pred cCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccccCC
Q 041031 85 AQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHS 164 (313)
Q Consensus 85 ~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~~~ 164 (313)
+++|+|.+++. .....+++..+..++.|++.||+|||+++ |+||||||+|||+++++.+||+|||++......
T Consensus 113 ~~gGsL~~~l~----~~~~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 185 (307)
T 3omv_A 113 CEGSSLYKHLH----VQETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp CSSCBHHHHHH----TSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred CCCCCHHHHHh----hcCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence 99999999995 33457999999999999999999999999 999999999999999999999999999865432
Q ss_pred hhhhhhcccccccccccCCccccC---CCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcC
Q 041031 165 PEIAAAASRIVGTFGYLAPEYVRD---GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFND 241 (313)
Q Consensus 165 ~~~~~~~~~~~~~~~~~aPE~~~~---~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (313)
.. ........||+.|+|||++.+ ..++.++|||||||++|||+||+.||.+.....
T Consensus 186 ~~-~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~-------------------- 244 (307)
T 3omv_A 186 SG-SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-------------------- 244 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH--------------------
T ss_pred Cc-ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH--------------------
Confidence 22 122334579999999999964 358999999999999999999999997654310
Q ss_pred cHHHHHHhhh-hcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcc
Q 041031 242 TKDFMAKLTE-CLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISS 300 (313)
Q Consensus 242 ~~~~~~~l~~-~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 300 (313)
.....+.. ...+.+.....+++..+.+|+.+||+.||++|||+.||++.|+.+...-
T Consensus 245 --~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 245 --QIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp --HHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred --HHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 11111211 2233444455567788999999999999999999999999999887653
No 6
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.1e-56 Score=390.74 Aligned_cols=256 Identities=21% Similarity=0.260 Sum_probs=208.9
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEeccccccHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEeecCC
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYEYAQN 87 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e~~~~ 87 (313)
.+.|.+.++||+|+||.||+|+++ |+.||||+++.... ..+|+.+++.+ |||||++++++.+.+.++|||||++|
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~--~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~g 134 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEG 134 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh--HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCC
Confidence 356888899999999999999987 88999999976543 24799999999 99999999999999999999999999
Q ss_pred CChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCC-cEEEeeccccccccCChh
Q 041031 88 GALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF-RAKIADFGLVKLLEHSPE 166 (313)
Q Consensus 88 ~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~-~~~l~dfg~~~~~~~~~~ 166 (313)
|+|.+++. ..+.+++..++.++.|++.||+|||+++ |+||||||+|||++.+| .+||+|||++........
T Consensus 135 g~L~~~l~-----~~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~ 206 (336)
T 4g3f_A 135 GSLGQLIK-----QMGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 206 (336)
T ss_dssp CBHHHHHH-----HHSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC-----
T ss_pred CcHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCc
Confidence 99999994 4467999999999999999999999999 99999999999999887 699999999987654322
Q ss_pred hh--hhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcCcHH
Q 041031 167 IA--AAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKD 244 (313)
Q Consensus 167 ~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (313)
.. .......||+.|+|||++.+..++.++|||||||++|+|+||+.||.+..... +
T Consensus 207 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~---------~------------- 264 (336)
T 4g3f_A 207 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP---------L------------- 264 (336)
T ss_dssp -------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC---------C-------------
T ss_pred ccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH---------H-------------
Confidence 11 12233579999999999999999999999999999999999999997654421 0
Q ss_pred HHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcc
Q 041031 245 FMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISS 300 (313)
Q Consensus 245 ~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 300 (313)
...+... .+.........+..+.+||.+||+.||.+|||+.|+++.|...+.+.
T Consensus 265 -~~~i~~~-~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~ 318 (336)
T 4g3f_A 265 -CLKIASE-PPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV 318 (336)
T ss_dssp -HHHHHHS-CCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred -HHHHHcC-CCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh
Confidence 1111110 01111123445668899999999999999999999999998887653
No 7
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.5e-56 Score=385.66 Aligned_cols=246 Identities=23% Similarity=0.379 Sum_probs=207.3
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEecccc------ccHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT------KSKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLV 81 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~------~~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv 81 (313)
.++|++.+.||+|+||.||+|+++ ++.||||++... ..+.+.+|+++++.+ ||||+++++++.+.+.+|+|
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 467999999999999999999987 889999998643 345688999999999 99999999999999999999
Q ss_pred EeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccc
Q 041031 82 YEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL 161 (313)
Q Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~ 161 (313)
|||++||+|.+++. ..+.+++..++.++.|++.||.|||+++ |+||||||+|||++++|.+||+|||++...
T Consensus 111 mEy~~gG~L~~~i~-----~~~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~ 182 (311)
T 4aw0_A 111 LSYAKNGELLKYIR-----KIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVL 182 (311)
T ss_dssp ECCCTTEEHHHHHH-----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EecCCCCCHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceec
Confidence 99999999999994 4467999999999999999999999999 999999999999999999999999999876
Q ss_pred cCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcC
Q 041031 162 EHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFND 241 (313)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (313)
..... ........||+.|+|||++.+..|+.++|||||||++|+|++|..||.+.+..
T Consensus 183 ~~~~~-~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--------------------- 240 (311)
T 4aw0_A 183 SPESK-QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG--------------------- 240 (311)
T ss_dssp CTTTT-CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH---------------------
T ss_pred CCCCC-cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH---------------------
Confidence 54322 12334567999999999999999999999999999999999999999754321
Q ss_pred cHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 242 TKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
+....+... ... .....+..+.+||.+||..||++|||++|++..
T Consensus 241 --~~~~~i~~~-~~~---~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 241 --LIFAKIIKL-EYD---FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp --HHHHHHHHT-CCC---CCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred --HHHHHHHcC-CCC---CCcccCHHHHHHHHHHccCCHhHCcChHHHcCC
Confidence 111222111 111 122345678899999999999999999997543
No 8
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=7.1e-56 Score=383.44 Aligned_cols=255 Identities=26% Similarity=0.417 Sum_probs=210.2
Q ss_pred hcCccccceeccCCeEEEEEeEEC-------CcceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR-------GKNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAGGDSL 78 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~-------~~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~ 78 (313)
.++++..++||+|+||.||+|.+. ++.||||.++... .+.+.+|+.+++++ |||||++++++.+.+.+
T Consensus 25 ~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~ 104 (308)
T 4gt4_A 25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPL 104 (308)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEE
Confidence 456788999999999999999874 4679999997543 45688999999999 99999999999999999
Q ss_pred EEEEeecCCCChhhhhcCCCCC-----------CCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCC
Q 041031 79 FLVYEYAQNGALSDHLHWPSVK-----------GKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSN 147 (313)
Q Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~-----------~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~ 147 (313)
++||||+++|+|.++|...... ....+++..+..++.|++.||+|||+++ |+||||||+|||++++
T Consensus 105 ~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~ 181 (308)
T 4gt4_A 105 SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDK 181 (308)
T ss_dssp EEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGG
T ss_pred EEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCC
Confidence 9999999999999999543211 1246899999999999999999999999 9999999999999999
Q ss_pred CcEEEeeccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccc
Q 041031 148 FRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYT 226 (313)
Q Consensus 148 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~ 226 (313)
+.+||+|||++........ ........+|+.|+|||++.+..++.++|||||||++|||+| |..||.+....
T Consensus 182 ~~~Ki~DFGlar~~~~~~~-~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~------ 254 (308)
T 4gt4_A 182 LNVKISDLGLFREVYAADY-YKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ------ 254 (308)
T ss_dssp GCEEECCSCCBCGGGGGGC-BCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH------
T ss_pred CCEEECCcccceeccCCCc-eeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH------
Confidence 9999999999886543221 122334578999999999999999999999999999999999 89999765431
Q ss_pred cchhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHH
Q 041031 227 EHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSH 295 (313)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~ 295 (313)
+....+.. ........+++..+.+|+.+||+.||++|||+.||+++|+.
T Consensus 255 -----------------~~~~~i~~---~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a 303 (308)
T 4gt4_A 255 -----------------DVVEMIRN---RQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA 303 (308)
T ss_dssp -----------------HHHHHHHT---TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred -----------------HHHHHHHc---CCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 22222222 11222344567789999999999999999999999999974
No 9
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.3e-55 Score=374.68 Aligned_cols=242 Identities=24% Similarity=0.363 Sum_probs=190.5
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc------cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK------SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLV 81 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~------~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv 81 (313)
.++|++.+.||+|+||.||+|+++ ++.||||++.... ...+.+|+++++.+ ||||+++++++.+.+.+++|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 478999999999999999999987 8899999986432 34588999999999 99999999999999999999
Q ss_pred EeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccc
Q 041031 82 YEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL 161 (313)
Q Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~ 161 (313)
|||+ +|+|.+++. ..+.+++..++.++.|++.||+|||+++ |+||||||+||++++++.+||+|||++...
T Consensus 92 mEy~-~g~L~~~l~-----~~~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~ 162 (275)
T 3hyh_A 92 IEYA-GNELFDYIV-----QRDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIM 162 (275)
T ss_dssp EECC-CEEHHHHHH-----HSCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC---
T ss_pred EeCC-CCCHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeec
Confidence 9999 679999984 4467999999999999999999999999 999999999999999999999999999865
Q ss_pred cCChhhhhhcccccccccccCCccccCCCC-CCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhc
Q 041031 162 EHSPEIAAAASRIVGTFGYLAPEYVRDGCV-TTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240 (313)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (313)
.... ......||+.|+|||++.+..+ +.++|||||||++|+|+||+.||.+....
T Consensus 163 ~~~~----~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~-------------------- 218 (275)
T 3hyh_A 163 TDGN----FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP-------------------- 218 (275)
T ss_dssp ----------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------------------
T ss_pred CCCC----ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH--------------------
Confidence 5432 2234579999999999998876 57999999999999999999999653321
Q ss_pred CcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 241 DTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
+....+.... .. .....+..+.+|+.+||+.||++|||++|+++.
T Consensus 219 ---~~~~~i~~~~-~~---~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 219 ---VLFKNISNGV-YT---LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ---HHHHHHHHTC-CC---CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred ---HHHHHHHcCC-CC---CCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 1112222111 11 122345678899999999999999999999874
No 10
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2.4e-55 Score=392.51 Aligned_cols=246 Identities=24% Similarity=0.397 Sum_probs=208.7
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEecccc---ccHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEee
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT---KSKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYEY 84 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~---~~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e~ 84 (313)
.+.|+++++||+|+||.||+|+++ |+.||||++... ..+.+.+|+.+|+.+ |||||++++++.+.+.+||||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 357999999999999999999997 889999998643 355688999999999 99999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccccCC
Q 041031 85 AQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHS 164 (313)
Q Consensus 85 ~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~~~ 164 (313)
++||+|.+++. ...+++..++.++.|++.||+|||+++ |+||||||+|||++.+|.+||+|||++......
T Consensus 230 ~~gG~L~~~i~------~~~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~ 300 (423)
T 4fie_A 230 LEGGALTDIVT------HTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 300 (423)
T ss_dssp CTTEEHHHHHH------HSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSS
T ss_pred CCCCcHHHHHh------ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCCC
Confidence 99999999984 245899999999999999999999999 999999999999999999999999999876543
Q ss_pred hhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcCcHH
Q 041031 165 PEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKD 244 (313)
Q Consensus 165 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (313)
. .......||+.|+|||++.+..|+.++|||||||++|+|++|..||.+.... +
T Consensus 301 ~---~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-----------------------~ 354 (423)
T 4fie_A 301 V---PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-----------------------K 354 (423)
T ss_dssp C---CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----------------------H
T ss_pred C---ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-----------------------H
Confidence 2 1233457999999999999999999999999999999999999999754321 2
Q ss_pred HHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 245 FMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 245 ~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
....+.....+.+.. ....+..+.+||.+||..||++|||+.|+++.
T Consensus 355 ~~~~i~~~~~~~~~~-~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 355 AMKMIRDNLPPRLKN-LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp HHHHHHHSCCCCCSC-TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHHcCCCCCCcc-cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 223333332222222 23445678899999999999999999999874
No 11
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.3e-54 Score=371.52 Aligned_cols=241 Identities=25% Similarity=0.417 Sum_probs=194.8
Q ss_pred cccceeccCCeEEEEEeEEC--CcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEe----CCeEEEEE
Q 041031 15 STSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAG----GDSLFLVY 82 (313)
Q Consensus 15 ~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~----~~~~~lv~ 82 (313)
+..++||+|+||.||+|.+. +..||+|.+.... .+.+.+|+++++.+ |||||++++++.+ .+.+++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 56778999999999999988 7789999986432 34578999999999 9999999999865 35689999
Q ss_pred eecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeC-CCCcEEEeeccccccc
Q 041031 83 EYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLD-SNFRAKIADFGLVKLL 161 (313)
Q Consensus 83 e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~-~~~~~~l~dfg~~~~~ 161 (313)
||+++|+|.+++. ....+++..++.++.|++.||+|||+++. +|+||||||+|||++ ++|.+||+|||++...
T Consensus 109 Ey~~gg~L~~~l~-----~~~~l~~~~~~~~~~qi~~aL~ylH~~~~-~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~ 182 (290)
T 3fpq_A 109 ELMTSGTLKTYLK-----RFKVMKIKVLRSWCRQILKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp ECCCSCBHHHHHH-----HHSSCCHHHHHHHHHHHHHHHHHHHTSSS-CCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred eCCCCCCHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHCCC-CEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence 9999999999994 44679999999999999999999999863 399999999999997 4799999999999754
Q ss_pred cCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcC
Q 041031 162 EHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFND 241 (313)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (313)
... ......||+.|+|||++.+ .|+.++|||||||++|+|+||+.||...... .
T Consensus 183 ~~~-----~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~--------~------------ 236 (290)
T 3fpq_A 183 RAS-----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA--------A------------ 236 (290)
T ss_dssp CTT-----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH--------H------------
T ss_pred CCC-----ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH--------H------------
Confidence 332 2334579999999999875 5999999999999999999999999654331 0
Q ss_pred cHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 041031 242 TKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAI 291 (313)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 291 (313)
.....+.....+ .......+..+.+|+.+||+.||++|||+.|+++
T Consensus 237 --~~~~~i~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 237 --QIYRRVTSGVKP--ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp --HHHHHHTTTCCC--GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred --HHHHHHHcCCCC--CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 111222211111 1122233457889999999999999999999986
No 12
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=8.1e-55 Score=383.19 Aligned_cols=265 Identities=26% Similarity=0.407 Sum_probs=215.2
Q ss_pred HHhcCccccceeccCCeEEEEEeEECC-------cceEEEeccccc----cHHHHHHHHHHHhc--CCCceeeeeEEEeC
Q 041031 9 DATSNFSTSLKIGQGSYGSVYLGKLRG-------KNAAIKQMKNTK----SKEFSSELKILCKV--HSNLIELIGYAAGG 75 (313)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~v~~~~~~~-------~~~aiK~~~~~~----~~~~~~e~~~l~~l--h~~i~~~~~~~~~~ 75 (313)
...++|++.++||+|+||.||+|.+.+ +.||||.+.... ...+.+|+++|.++ |||||++++++...
T Consensus 61 i~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~ 140 (353)
T 4ase_A 61 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 140 (353)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred ecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEec
Confidence 345789999999999999999998763 469999987654 34578899999999 58999999998664
Q ss_pred -CeEEEEEeecCCCChhhhhcCCCC-----------CCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCee
Q 041031 76 -DSLFLVYEYAQNGALSDHLHWPSV-----------KGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNIL 143 (313)
Q Consensus 76 -~~~~lv~e~~~~~~L~~~l~~~~~-----------~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil 143 (313)
+.+++||||+++|+|.++|..... .....+++..+..++.|++.||.|||+++ |+||||||+|||
T Consensus 141 ~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRDLK~~NIL 217 (353)
T 4ase_A 141 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNIL 217 (353)
T ss_dssp TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEE
T ss_pred CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCccCcccee
Confidence 568999999999999999954321 12346899999999999999999999999 999999999999
Q ss_pred eCCCCcEEEeeccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCC
Q 041031 144 LDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGN 222 (313)
Q Consensus 144 ~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~ 222 (313)
+++++.+||+|||++......... .......+|+.|+|||++.+..++.++|||||||++|||+| |..||.+....
T Consensus 218 l~~~~~vKi~DFGlar~~~~~~~~-~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~-- 294 (353)
T 4ase_A 218 LSEKNVVKICDFGLARDIYKDPDY-VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-- 294 (353)
T ss_dssp ECGGGCEEECCCGGGSCTTTCTTS-EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS--
T ss_pred eCCCCCEEECcchhhhhcccCCCc-eeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH--
Confidence 999999999999999866543321 22334568999999999999999999999999999999998 89999765432
Q ss_pred CccccchhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcccc
Q 041031 223 NQYTEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSKE 302 (313)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~ 302 (313)
..+...+.....+.. ...++..+.+|+.+||+.||++|||+.+|++.|+.++.++.+
T Consensus 295 --------------------~~~~~~i~~g~~~~~---p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~~~ 351 (353)
T 4ase_A 295 --------------------EEFCRRLKEGTRMRA---PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQ 351 (353)
T ss_dssp --------------------HHHHHHHHHTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC-
T ss_pred --------------------HHHHHHHHcCCCCCC---CccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHhhC
Confidence 122333333333222 234556789999999999999999999999999998876543
No 13
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.6e-54 Score=374.05 Aligned_cols=269 Identities=26% Similarity=0.402 Sum_probs=206.6
Q ss_pred hcCccccceeccCCeEEEEEeEECCcceEEEeccccccHHHHHHHHHH--Hhc-CCCceeeeeEEEeCC----eEEEEEe
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKIL--CKV-HSNLIELIGYAAGGD----SLFLVYE 83 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~aiK~~~~~~~~~~~~e~~~l--~~l-h~~i~~~~~~~~~~~----~~~lv~e 83 (313)
.++|.+.++||+|+||.||+|+++|+.||||+++.........|.+++ ..+ ||||+++++++.+.+ .++||||
T Consensus 2 ar~i~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 2 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred CcEEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 457899999999999999999999999999999877666655555544 556 999999999997654 5899999
Q ss_pred ecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcC--------CCCceEEeccCCCCeeeCCCCcEEEeec
Q 041031 84 YAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQY--------TKPYYVHRDVKTSNILLDSNFRAKIADF 155 (313)
Q Consensus 84 ~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~--------~~~~i~h~di~p~nil~~~~~~~~l~df 155 (313)
|+++|+|.+++. ...++++.+..++.|++.||+|||++ + |+||||||+|||+++++.+||+||
T Consensus 82 y~~~gsL~~~l~------~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~---IiHRDlKp~NILl~~~~~~Ki~DF 152 (303)
T 3hmm_A 82 YHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp CCTTCBHHHHHH------HCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCC---EECSCCCGGGEEECTTSCEEECCC
T ss_pred CCCCCcHHHHHH------hCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---EeeccCCcccEEECCCCCEEEEeC
Confidence 999999999994 24588999999999999999999987 6 999999999999999999999999
Q ss_pred cccccccCChhhh-hhcccccccccccCCccccCC------CCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccc--
Q 041031 156 GLVKLLEHSPEIA-AAASRIVGTFGYLAPEYVRDG------CVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYT-- 226 (313)
Q Consensus 156 g~~~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~------~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~-- 226 (313)
|++.......... .......||+.|+|||++.+. .++.++|||||||++|||+||..||............
T Consensus 153 Gla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~ 232 (303)
T 3hmm_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp TTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTS
T ss_pred CCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcc
Confidence 9998765432211 122235799999999999764 3678999999999999999999888655432211110
Q ss_pred -cchhHHHHHHHHhcCcHHHHHH-hhhhcCCCCCC--CCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhc
Q 041031 227 -EHRSLVDYMLAVFNDTKDFMAK-LTECLDPNLTR--YHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILIS 299 (313)
Q Consensus 227 -~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~--~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 299 (313)
...... +.... ....+++.+.. ...+....+.+|+.+||+.||++|||+.||+++|+++..+
T Consensus 233 ~~~~~~~-----------~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 233 PSDPSVE-----------EMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CSSCCHH-----------HHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cccchHH-----------HHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 001111 11111 12233344333 2345667899999999999999999999999999988654
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3.1e-55 Score=377.29 Aligned_cols=238 Identities=26% Similarity=0.336 Sum_probs=193.2
Q ss_pred hcCccccceeccCCeEEEEEeEEC-----CcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR-----GKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLF 79 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~-----~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~ 79 (313)
.++|++++.||+|+||.||+|++. ++.||||+++... ...+.+|+++++.+ ||||+++++++.+.+.++
T Consensus 23 p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 102 (304)
T 3ubd_A 23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLY 102 (304)
T ss_dssp GGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEE
T ss_pred ccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 478999999999999999999873 5679999986532 33578899999999 999999999999999999
Q ss_pred EEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccc
Q 041031 80 LVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVK 159 (313)
Q Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~ 159 (313)
+||||++||+|.+++. ..+.+++..++.++.|++.||+|||+++ |+||||||+|||++++|.+||+|||++.
T Consensus 103 ivmEy~~gg~L~~~l~-----~~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~ 174 (304)
T 3ubd_A 103 LILDFLRGGDLFTRLS-----KEVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK 174 (304)
T ss_dssp EEECCCTTCEEHHHHH-----HHCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEE
T ss_pred EEEEcCCCCCHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccce
Confidence 9999999999999994 4467999999999999999999999999 9999999999999999999999999998
Q ss_pred cccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHh
Q 041031 160 LLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF 239 (313)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (313)
...... .......||+.|+|||++.+..|+.++|||||||++|+|+||+.||.+.+..
T Consensus 175 ~~~~~~---~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~------------------- 232 (304)
T 3ubd_A 175 ESIDHE---KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK------------------- 232 (304)
T ss_dssp C--------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------------------
T ss_pred eccCCC---ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH-------------------
Confidence 654322 2233457999999999999999999999999999999999999999754321
Q ss_pred cCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCH
Q 041031 240 NDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDM 286 (313)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 286 (313)
+....+... .. ......+..+.+|+++||+.||++|||+
T Consensus 233 ----~~~~~i~~~---~~-~~p~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 233 ----ETMTMILKA---KL-GMPQFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp ----HHHHHHHHC---CC-CCCTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred ----HHHHHHHcC---CC-CCCCcCCHHHHHHHHHHcccCHHHCCCC
Confidence 112222211 11 1223455678899999999999999985
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=4.7e-53 Score=364.77 Aligned_cols=248 Identities=23% Similarity=0.388 Sum_probs=186.3
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEeCC-------
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAGGD------- 76 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~------- 76 (313)
.++|++++.||+|+||.||+|+++ ++.||||.++... .+.+.+|+++|+.+ |||||++++++.+.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 357999999999999999999987 8899999986443 34578899999999 999999999987544
Q ss_pred -----eEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEE
Q 041031 77 -----SLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAK 151 (313)
Q Consensus 77 -----~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~ 151 (313)
.+++||||+++|+|.+++.... .........++.++.|++.||+|||+++ |+||||||+|||++.++.+|
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vK 158 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRC--TIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVK 158 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCC--SGGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEE
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcC--CCChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEE
Confidence 3789999999999999995321 1233456678899999999999999999 99999999999999999999
Q ss_pred EeeccccccccCChhhh---------hhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCC
Q 041031 152 IADFGLVKLLEHSPEIA---------AAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGN 222 (313)
Q Consensus 152 l~dfg~~~~~~~~~~~~---------~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~ 222 (313)
|+|||++.......... .......||+.|+|||++.+..|+.++|||||||++|+|++ ||....
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~---- 231 (299)
T 4g31_A 159 VGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM---- 231 (299)
T ss_dssp ECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH----
T ss_pred EccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc----
Confidence 99999998765432211 11223469999999999999999999999999999999996 764211
Q ss_pred CccccchhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 041031 223 NQYTEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAI 291 (313)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 291 (313)
+....+..................+.+|+.+||+.||.+|||+.|+++
T Consensus 232 ---------------------~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 232 ---------------------ERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp ---------------------HHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---------------------HHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 001111111122222222333455778999999999999999999987
No 16
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.1e-51 Score=363.56 Aligned_cols=203 Identities=27% Similarity=0.424 Sum_probs=172.9
Q ss_pred HHHHHHhcCccccceeccCCeEEEEEeEEC-----CcceEEEeccccc-cHHHHHHHHHHHhc--CCCceeeeeEEEeCC
Q 041031 5 NEVRDATSNFSTSLKIGQGSYGSVYLGKLR-----GKNAAIKQMKNTK-SKEFSSELKILCKV--HSNLIELIGYAAGGD 76 (313)
Q Consensus 5 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~-----~~~~aiK~~~~~~-~~~~~~e~~~l~~l--h~~i~~~~~~~~~~~ 76 (313)
+.+..+.+.|++.++||+|+||.||+|+++ ++.||||.+.... ...+.+|+++++.+ ||||+++++++.+.+
T Consensus 14 ~~~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~ 93 (361)
T 4f9c_A 14 EAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKND 93 (361)
T ss_dssp HHSGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT
T ss_pred HhcCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEECC
Confidence 445567789999999999999999999864 5679999886554 55688999999998 999999999999999
Q ss_pred eEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCC-CcEEEeec
Q 041031 77 SLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSN-FRAKIADF 155 (313)
Q Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~-~~~~l~df 155 (313)
.+++||||+++|+|.+++. .+++..++.++.|++.||+|||++| |+||||||+|||++.+ +.+||+||
T Consensus 94 ~~~lvmE~~~g~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DF 162 (361)
T 4f9c_A 94 HVVIAMPYLEHESFLDILN--------SLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDF 162 (361)
T ss_dssp EEEEEEECCCCCCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCC
T ss_pred EEEEEEeCCCcccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcC
Confidence 9999999999999999982 4889999999999999999999999 9999999999999876 89999999
Q ss_pred cccccccCChhhh-------------------------hhcccccccccccCCccccCC-CCCCccchhhHHHHHHHHHh
Q 041031 156 GLVKLLEHSPEIA-------------------------AAASRIVGTFGYLAPEYVRDG-CVTTKSDVYAFGVVLMELIT 209 (313)
Q Consensus 156 g~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~aPE~~~~~-~~~~~~DiwslG~~l~~~~t 209 (313)
|+|.......... .......||+.|+|||++.+. .++.++||||+||++|+|++
T Consensus 163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~ 242 (361)
T 4f9c_A 163 GLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLS 242 (361)
T ss_dssp TTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHH
T ss_pred CCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHH
Confidence 9997654321110 111234699999999999875 58999999999999999999
Q ss_pred CCCCccCCC
Q 041031 210 GQQALSRDA 218 (313)
Q Consensus 210 g~~p~~~~~ 218 (313)
|+.||....
T Consensus 243 G~~Pf~~~~ 251 (361)
T 4f9c_A 243 GRYPFYKAS 251 (361)
T ss_dssp TCSSSSCCS
T ss_pred CCCCCCCCC
Confidence 999996544
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.3e-51 Score=364.74 Aligned_cols=263 Identities=25% Similarity=0.337 Sum_probs=199.7
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEe------CC
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAG------GD 76 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~------~~ 76 (313)
.++|++++.||+|+||.||+|+++ |+.||||+++... ...+.+|+++|+.+ ||||+++++++.. .+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 357999999999999999999987 8899999996532 34477899999999 9999999999753 46
Q ss_pred eEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecc
Q 041031 77 SLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFG 156 (313)
Q Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg 156 (313)
.+|+||||++ |+|.+++ ...+.+++..++.++.|++.||.|||+++ |+|+||||+|||++.+|.+|++|||
T Consensus 133 ~~~ivmE~~~-g~L~~~i-----~~~~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFG 203 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQII-----HSSQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFG 203 (398)
T ss_dssp CEEEEEECCS-EEHHHHH-----TSSSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEEeCCC-CCHHHHH-----HhcCCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeecc
Confidence 7899999995 6799998 34578999999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCChhh-hhhcccccccccccCCccccCC-CCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHH
Q 041031 157 LVKLLEHSPEI-AAAASRIVGTFGYLAPEYVRDG-CVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDY 234 (313)
Q Consensus 157 ~~~~~~~~~~~-~~~~~~~~~~~~~~aPE~~~~~-~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~ 234 (313)
++......... ........||+.|+|||++.+. .++.++||||+||++|+|++|++||.+.+.. .....
T Consensus 204 la~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~---------~~l~~ 274 (398)
T 4b99_A 204 MARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYV---------HQLQL 274 (398)
T ss_dssp TCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH---------HHHHH
T ss_pred eeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHH---------HHHHH
Confidence 99876543221 1233346899999999998875 4699999999999999999999999765431 11111
Q ss_pred HHHHhcC-cHH---------HHHHhhhhcCCCCCC----CCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 235 MLAVFND-TKD---------FMAKLTECLDPNLTR----YHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 235 ~~~~~~~-~~~---------~~~~l~~~~~~~~~~----~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
+...... ..+ ....+. .+.+.... .....+..+.+||.+||..||.+|||+.|+++.
T Consensus 275 I~~~~g~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 275 IMMVLGTPSPAVIQAVGAERVRAYIQ-SLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp HHHHHCCCCGGGTC-----CHHHHHH-SSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HHHhcCCCChHHhhhhhhhhhhhhhh-cCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 1111000 000 000000 00000000 112234678899999999999999999999874
No 18
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=5.2e-50 Score=374.55 Aligned_cols=248 Identities=20% Similarity=0.335 Sum_probs=207.6
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc---cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEe
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK---SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYE 83 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~---~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e 83 (313)
+.++|++.+.||+|+||.||+|.++ |+.||+|.+.... .+.+.+|+++|+.+ ||||+++++++.+.+.+++|||
T Consensus 155 il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E 234 (573)
T 3uto_A 155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYE 234 (573)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence 4578999999999999999999987 8899999986543 44578999999999 9999999999999999999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCC--CCcEEEeeccccccc
Q 041031 84 YAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDS--NFRAKIADFGLVKLL 161 (313)
Q Consensus 84 ~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~--~~~~~l~dfg~~~~~ 161 (313)
|++||+|.+++. .....+++..+..++.|++.||.|||+++ |+|+||||+|||++. .+.+||+|||++...
T Consensus 235 ~~~gg~L~~~i~----~~~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~ 307 (573)
T 3uto_A 235 FMSGGELFEKVA----DEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHL 307 (573)
T ss_dssp CCCCCBHHHHHT----CTTSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEEC
T ss_pred ecCCCcHHHHHH----HhCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeEc
Confidence 999999999984 34467999999999999999999999999 999999999999985 489999999999876
Q ss_pred cCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcC
Q 041031 162 EHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFND 241 (313)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (313)
.... ......||+.|+|||++.+..|+.++|||||||++|+|++|..||.+....
T Consensus 308 ~~~~----~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~--------------------- 362 (573)
T 3uto_A 308 DPKQ----SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD--------------------- 362 (573)
T ss_dssp CTTS----EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH---------------------
T ss_pred cCCC----ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH---------------------
Confidence 5432 223457999999999999999999999999999999999999999765431
Q ss_pred cHHHHHHhhhhcCCCCCC-CCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 242 TKDFMAKLTECLDPNLTR-YHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
+....+.... ..... .....+..+.+||++||..||.+|||+.|+++.
T Consensus 363 --~~~~~i~~~~-~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 363 --ETLRNVKSCD-WNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp --HHHHHHHTTC-CCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --HHHHHHHhCC-CCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1122222111 11111 223445678899999999999999999999873
No 19
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2.2e-49 Score=369.50 Aligned_cols=244 Identities=22% Similarity=0.313 Sum_probs=198.4
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc------cHHHHHH---HHHHHhc-CCCceeeeeEEEeCCeE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK------SKEFSSE---LKILCKV-HSNLIELIGYAAGGDSL 78 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~------~~~~~~e---~~~l~~l-h~~i~~~~~~~~~~~~~ 78 (313)
.++|+++++||+|+||.||+|+++ |+.||||++.... .....+| +.+++.+ ||||++++++|.+.+.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 578999999999999999999987 8899999986432 2234444 4555556 99999999999999999
Q ss_pred EEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccc
Q 041031 79 FLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLV 158 (313)
Q Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~ 158 (313)
|+||||++||+|.+++. ..+.+++..++.++.|++.||.|||+++ |+||||||+|||++.+|.+||+|||++
T Consensus 268 ylVmEy~~GGdL~~~l~-----~~~~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA 339 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLS-----QHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA 339 (689)
T ss_dssp EEEECCCCSCBHHHHHH-----HHCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEEecCCCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEeccccee
Confidence 99999999999999994 4567999999999999999999999999 999999999999999999999999999
Q ss_pred ccccCChhhhhhcccccccccccCCcccc-CCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHH
Q 041031 159 KLLEHSPEIAAAASRIVGTFGYLAPEYVR-DGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLA 237 (313)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~aPE~~~-~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 237 (313)
...... ......||+.|+|||++. +..|+.++|+|||||++|+|++|..||.+..... ..
T Consensus 340 ~~~~~~-----~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~---------~~----- 400 (689)
T 3v5w_A 340 CDFSKK-----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD---------KH----- 400 (689)
T ss_dssp EECSSC-----CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC---------HH-----
T ss_pred eecCCC-----CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH---------HH-----
Confidence 876543 233458999999999996 4679999999999999999999999997654321 00
Q ss_pred HhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCC-----HHHHHH
Q 041031 238 VFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPD-----MSNAAI 291 (313)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps-----~~~ll~ 291 (313)
+....+.. .... .....+..+.+||.+||..||.+|++ ++||++
T Consensus 401 ------~i~~~i~~-~~~~---~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 401 ------EIDRMTLT-MAVE---LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp ------HHHHHHHH-CCCC---CCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred ------HHHHhhcC-CCCC---CCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 11111111 1111 22345567889999999999999998 677764
No 20
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=3.6e-48 Score=339.71 Aligned_cols=283 Identities=34% Similarity=0.629 Sum_probs=225.5
Q ss_pred cChHHHHHHhcCccccceeccCCeEEEEEeEEC-CcceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEeC
Q 041031 2 FSYNEVRDATSNFSTSLKIGQGSYGSVYLGKLR-GKNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAGG 75 (313)
Q Consensus 2 ~~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~-~~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~ 75 (313)
||++++....++|.+.+.||+|+||.||+|.+. ++.||||.+.... ...+.+|+.+++.+ ||||+++++++.+.
T Consensus 20 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 99 (326)
T 3uim_A 20 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP 99 (326)
T ss_dssp CCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCS
T ss_pred ecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecC
Confidence 789999999999999999999999999999876 8899999987653 33578999999999 99999999999999
Q ss_pred CeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcC---CCCceEEeccCCCCeeeCCCCcEEE
Q 041031 76 DSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQY---TKPYYVHRDVKTSNILLDSNFRAKI 152 (313)
Q Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~~~~i~h~di~p~nil~~~~~~~~l 152 (313)
+..++||||+.+++|.+++.... .....+++..++.++.|++.||+|||+. + ++|+||||+||+++.++.++|
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~---ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 100 TERLLVYPYMANGSVASCLRERP-ESQPPLDWPKRQRIALGSARGLAYLHDHCDPK---IIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp SCCEEEEECCTTCBHHHHHHCCS-TTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSC---EECCCCSGGGEEECTTCCEEE
T ss_pred CceEEEEEeccCCCHHHHHHhcc-ccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC---eEeCCCchhhEEECCCCCEEe
Confidence 99999999999999999996443 2345689999999999999999999999 8 999999999999999999999
Q ss_pred eeccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHH
Q 041031 153 ADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLV 232 (313)
Q Consensus 153 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~ 232 (313)
+|||++........ .......+|+.|+|||++.+..++.++||||||+++|+|++|..||......... .....
T Consensus 176 ~Dfg~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~----~~~~~ 249 (326)
T 3uim_A 176 GDFGLAKLMDYKDT--HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD----DVMLL 249 (326)
T ss_dssp CCCSSCEECCSSSS--CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTS----CSBHH
T ss_pred ccCccccccCcccc--cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccccccccccc----chhHH
Confidence 99999987653322 2223345899999999999888999999999999999999999999532111100 01111
Q ss_pred HHHHHHhcCcHHHHHHhhhhcCCCCCC-CCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhc
Q 041031 233 DYMLAVFNDTKDFMAKLTECLDPNLTR-YHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILIS 299 (313)
Q Consensus 233 ~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 299 (313)
++....... ..+....+..+.. ........+.+++.+||+.||.+|||+.+|+++|++....
T Consensus 250 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~ 312 (326)
T 3uim_A 250 DWVKGLLKE-----KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 312 (326)
T ss_dssp HHHTTTTSS-----CCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCS
T ss_pred HHHHHHhhc-----hhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchh
Confidence 111111111 0112222232222 5667788999999999999999999999999999865443
No 21
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.3e-47 Score=335.59 Aligned_cols=282 Identities=34% Similarity=0.610 Sum_probs=225.4
Q ss_pred ChHHHHHHhcCccccceeccCCeEEEEEeEEC-CcceEEEeccccc---cHHHHHHHHHHHhc-CCCceeeeeEEEeCCe
Q 041031 3 SYNEVRDATSNFSTSLKIGQGSYGSVYLGKLR-GKNAAIKQMKNTK---SKEFSSELKILCKV-HSNLIELIGYAAGGDS 77 (313)
Q Consensus 3 ~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~-~~~~aiK~~~~~~---~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~ 77 (313)
++.++....++|.+.+.||+|+||.||+|.+. ++.||||.+.... .+.+.+|+.+++.+ ||||+++++++.+.+.
T Consensus 30 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 109 (321)
T 2qkw_B 30 PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNE 109 (321)
T ss_dssp CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTC
T ss_pred cHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCe
Confidence 34455667899999999999999999999987 8899999987654 35578899999999 9999999999999999
Q ss_pred EEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccc
Q 041031 78 LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGL 157 (313)
Q Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~ 157 (313)
.++||||+++++|.+++.... .....+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||+
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 110 MILIYKYMENGNLKRHLYGSD-LPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CEEEEECCTTCBTGGGSSSSC-CCSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCTT
T ss_pred EEEEEEcCCCCcHHHHHhccC-CCccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeeccc
Confidence 999999999999999985432 22346899999999999999999999999 99999999999999999999999999
Q ss_pred cccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHH
Q 041031 158 VKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLA 237 (313)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 237 (313)
+......... .......+++.|+|||++.+..++.++||||||+++|+|++|+.||......... ....+...
T Consensus 186 ~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~------~~~~~~~~ 258 (321)
T 2qkw_B 186 SKKGTELDQT-HLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMV------NLAEWAVE 258 (321)
T ss_dssp CEECSSSSCC-CCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCC------CHHHHTHH
T ss_pred cccccccccc-ccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHH------HHHHHhhh
Confidence 8764432211 1222345799999999999889999999999999999999999999765543211 11111111
Q ss_pred HhcCcHHHHHHhhhhcCCCCCC-CCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcc
Q 041031 238 VFNDTKDFMAKLTECLDPNLTR-YHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISS 300 (313)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 300 (313)
... ...+...+++.+.. .....+..+.+++.+||+.||++|||+.++++.|+.++...
T Consensus 259 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 259 SHN-----NGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp HHT-----TTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred ccc-----cccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 100 11122233333333 56778889999999999999999999999999999887643
No 22
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.6e-47 Score=335.68 Aligned_cols=260 Identities=29% Similarity=0.461 Sum_probs=211.1
Q ss_pred hcCccccceeccCCeEEEEEeEEC-----CcceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR-----GKNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFL 80 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~-----~~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~l 80 (313)
.++|.+.+.||+|+||.||+|.+. +..||||.+.... .+.+.+|+.+++.+ ||||+++++++.+.+..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 467999999999999999999985 3359999997643 34578899999999 9999999999999999999
Q ss_pred EEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccccc
Q 041031 81 VYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKL 160 (313)
Q Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~ 160 (313)
||||+++++|.+++. .....+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++..
T Consensus 128 v~e~~~~~~L~~~l~----~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 200 (325)
T 3kul_A 128 VTEYMENGSLDTFLR----THDGQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRV 200 (325)
T ss_dssp EEECCTTCBHHHHHH----TTTTCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred EeeCCCCCcHHHHHH----hcccCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCcccc
Confidence 999999999999995 33457999999999999999999999999 99999999999999999999999999987
Q ss_pred ccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchhHHHHHHHHh
Q 041031 161 LEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLVDYMLAVF 239 (313)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (313)
...............+|+.|+|||++.+..++.++||||||+++|+|++ |..||......
T Consensus 201 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~------------------- 261 (325)
T 3kul_A 201 LEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR------------------- 261 (325)
T ss_dssp CC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH-------------------
T ss_pred cccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH-------------------
Confidence 6554332222233345778999999998999999999999999999999 99999654331
Q ss_pred cCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhccccc
Q 041031 240 NDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSKEW 303 (313)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~~ 303 (313)
+....+...... ......+..+.+|+.+||+.||.+|||+.+|++.|+.+..+..+.
T Consensus 262 ----~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~~ 318 (325)
T 3kul_A 262 ----DVISSVEEGYRL---PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESL 318 (325)
T ss_dssp ----HHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC--
T ss_pred ----HHHHHHHcCCCC---CCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcccc
Confidence 222222222111 123355678899999999999999999999999999998775543
No 23
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=5e-48 Score=334.21 Aligned_cols=270 Identities=24% Similarity=0.407 Sum_probs=212.1
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc------cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK------SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLV 81 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~------~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv 81 (313)
.++|++.+.||+|+||.||+|++. +..+|+|.+.... .+.+.+|+.+++.+ ||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 468999999999999999999987 7889999885322 34577899999999 99999999999999999999
Q ss_pred EeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccc
Q 041031 82 YEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL 161 (313)
Q Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~ 161 (313)
|||+++++|.+++. ....+++..++.++.|++.||+|||+++ ++|+||||+||+++.++.++|+|||++...
T Consensus 90 ~e~~~g~~L~~~l~-----~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 161 (294)
T 4eqm_A 90 MEYIEGPTLSEYIE-----SHGPLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKAL 161 (294)
T ss_dssp EECCCSCBHHHHHH-----HHCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC
T ss_pred EeCCCCCCHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCcccc
Confidence 99999999999984 3457899999999999999999999999 999999999999999999999999998865
Q ss_pred cCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcC
Q 041031 162 EHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFND 241 (313)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (313)
..... .......+|+.|+|||++.+..++.++||||||+++|+|++|..||.+.... .
T Consensus 162 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~------------~-------- 219 (294)
T 4eqm_A 162 SETSL--TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV------------S-------- 219 (294)
T ss_dssp ---------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH------------H--------
T ss_pred ccccc--cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH------------H--------
Confidence 53322 2223346899999999999999999999999999999999999999754321 0
Q ss_pred cHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCC-CHHHHHHHHHHHHhcccccccccccccC
Q 041031 242 TKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRP-DMSNAAIRLSHILISSKEWEKMECCHQM 312 (313)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-s~~~ll~~l~~~~~~~~~~~~~~~~~~~ 312 (313)
.....+...............+..+.+++.+||+.||.+|| +++++.+.|..+..+....++.....+|
T Consensus 220 --~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 289 (294)
T 4eqm_A 220 --IAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRANEDVYELDKM 289 (294)
T ss_dssp --HHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSSTTCCCCC----
T ss_pred --HHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccCCcchhhhhcc
Confidence 00111111000000012334556789999999999999999 9999999999998887766666555443
No 24
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.1e-47 Score=324.94 Aligned_cols=254 Identities=24% Similarity=0.429 Sum_probs=212.6
Q ss_pred hcCccccceeccCCeEEEEEeEEC-CcceEEEeccccc--cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEeecC
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR-GKNAAIKQMKNTK--SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYEYAQ 86 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~-~~~~aiK~~~~~~--~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (313)
.++|++.+.||+|+||.||+|.+. ++.||+|.+.... .+.+.+|+.+++.+ ||||+++++++.+.+..++||||++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 478999999999999999999996 7789999997653 56688999999999 9999999999999999999999999
Q ss_pred CCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccccCChh
Q 041031 87 NGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPE 166 (313)
Q Consensus 87 ~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 166 (313)
+++|.+++. .....+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||++........
T Consensus 89 ~~~L~~~l~----~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 161 (269)
T 4hcu_A 89 HGCLSDYLR----TQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 161 (269)
T ss_dssp TCBHHHHHH----TTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred CCcHHHHHH----hcCcccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEecccccccccccccc
Confidence 999999995 33456899999999999999999999999 99999999999999999999999999886554322
Q ss_pred hhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchhHHHHHHHHhcCcHHH
Q 041031 167 IAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDF 245 (313)
Q Consensus 167 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (313)
.......+++.|+|||++.+..++.++||||||+++|+|++ |..||...... +.
T Consensus 162 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~-----------------------~~ 216 (269)
T 4hcu_A 162 --TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----------------------EV 216 (269)
T ss_dssp --HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----------------------HH
T ss_pred --ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH-----------------------HH
Confidence 22233456778999999999999999999999999999999 99999654321 11
Q ss_pred HHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhc
Q 041031 246 MAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILIS 299 (313)
Q Consensus 246 ~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 299 (313)
...+....... .....+..+.+++.+||+.||.+|||+.++++.|+++..+
T Consensus 217 ~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 217 VEDISTGFRLY---KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp HHHHHTTCCCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHhcCccCC---CCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 22222221111 2233456788999999999999999999999999998764
No 25
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=3.9e-47 Score=330.83 Aligned_cols=262 Identities=29% Similarity=0.449 Sum_probs=205.1
Q ss_pred HHHhcCccccceeccCCeEEEEEeEECCcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEE
Q 041031 8 RDATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLV 81 (313)
Q Consensus 8 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv 81 (313)
....++|++.+.||+|+||.||+|++.++.||||++.... ...+.+|+.+++++ ||||+++++++.+.+..++|
T Consensus 33 ~i~~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 33 DIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred cCChhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 3456789999999999999999999999999999987543 33577899999999 99999999999999999999
Q ss_pred EeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccc
Q 041031 82 YEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL 161 (313)
Q Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~ 161 (313)
|||+++++|.+++.... ....+++..++.++.|++.||+|||+.+. +++|+||||+||+++.++.++|+|||++...
T Consensus 113 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~~-~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 113 TEYLSRGSLYRLLHKSG--AREQLDERRRLSMAYDVAKGMNYLHNRNP-PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp EECCTTCBHHHHHHSTT--HHHHSCHHHHHHHHHHHHHHHHHHHTSSS-CCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred EecCCCCcHHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHcCCC-CEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 99999999999995221 11248999999999999999999999863 3899999999999999999999999998754
Q ss_pred cCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcC
Q 041031 162 EHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFND 241 (313)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (313)
.... .......+|+.|+|||++.+..++.++||||||+++|+|++|..||......
T Consensus 190 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~--------------------- 245 (309)
T 3p86_A 190 ASTF---LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA--------------------- 245 (309)
T ss_dssp ---------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH---------------------
T ss_pred cccc---cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---------------------
Confidence 4321 1223346899999999999999999999999999999999999999754321
Q ss_pred cHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcc
Q 041031 242 TKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISS 300 (313)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 300 (313)
+....+.. ...........+..+.+|+.+||+.||.+|||+.++++.|+.+....
T Consensus 246 --~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 246 --QVVAAVGF--KCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp --HHHHHHHH--SCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred --HHHHHHHh--cCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 11111111 11111223445567899999999999999999999999999998764
No 26
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=6.9e-47 Score=328.79 Aligned_cols=278 Identities=37% Similarity=0.693 Sum_probs=227.2
Q ss_pred cChHHHHHHhcCcccc------ceeccCCeEEEEEeEECCcceEEEeccccc-------cHHHHHHHHHHHhc-CCCcee
Q 041031 2 FSYNEVRDATSNFSTS------LKIGQGSYGSVYLGKLRGKNAAIKQMKNTK-------SKEFSSELKILCKV-HSNLIE 67 (313)
Q Consensus 2 ~~~~~~~~~~~~y~~~------~~lg~g~~g~v~~~~~~~~~~aiK~~~~~~-------~~~~~~e~~~l~~l-h~~i~~ 67 (313)
|++.++..+..+|... +.||+|+||.||+|.+.++.+|||.+.... .+.+.+|+.+++.+ ||||++
T Consensus 15 ~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~ 94 (307)
T 2nru_A 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE 94 (307)
T ss_dssp CCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCC
T ss_pred ccHHHHHHHHcccccccccccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEE
Confidence 8899999999999887 999999999999999999999999986431 34578999999999 999999
Q ss_pred eeeEEEeCCeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCC
Q 041031 68 LIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSN 147 (313)
Q Consensus 68 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~ 147 (313)
+++++.+.+..+++|||+++++|.+++.... ....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++++
T Consensus 95 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~ 169 (307)
T 2nru_A 95 LLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD--GTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILLDEA 169 (307)
T ss_dssp EEEEECSSSSCEEEEECCTTCBHHHHHHTGG--GCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTT
T ss_pred EEEEEecCCceEEEEEecCCCcHHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEcCC
Confidence 9999999999999999999999999985322 2356899999999999999999999999 9999999999999999
Q ss_pred CcEEEeeccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCcccc
Q 041031 148 FRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTE 227 (313)
Q Consensus 148 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~ 227 (313)
+.++|+|||++......... .......+++.|+|||++.+ .++.++||||||+++|+|++|..||.......
T Consensus 170 ~~~kl~Dfg~~~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~------ 241 (307)
T 2nru_A 170 FTAKISDFGLARASEKFAQT-VMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQ------ 241 (307)
T ss_dssp CCEEECCCTTCEECCSCSSC-EECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS------
T ss_pred CcEEEeeccccccccccccc-ccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchH------
Confidence 99999999998765432211 12223468999999998875 48899999999999999999999997654431
Q ss_pred chhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHh
Q 041031 228 HRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILI 298 (313)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 298 (313)
.+..+........ ..+...++..+.......+..+.+++.+||+.||.+|||+.++++.|+++..
T Consensus 242 --~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 242 --LLLDIKEEIEDEE----KTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp --BTTHHHHHHHTTS----CCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred --HHHHHHHHhhhhh----hhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 1112211111111 1223344555555677888899999999999999999999999999998754
No 27
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=6.5e-47 Score=327.66 Aligned_cols=247 Identities=23% Similarity=0.399 Sum_probs=205.3
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEecccc---ccHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEe
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT---KSKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYE 83 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~---~~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e 83 (313)
...+|++.+.||+|+||.||+|.+. ++.||||.+... ..+.+.+|+.+++.+ ||||+++++++...+..++|||
T Consensus 18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 97 (297)
T 3fxz_A 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (297)
T ss_dssp GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence 4578999999999999999999876 889999998643 345578899999999 9999999999999999999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccccC
Q 041031 84 YAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEH 163 (313)
Q Consensus 84 ~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~~ 163 (313)
|+.+++|.+++. ...+++..++.++.|++.||+|||+++ ++|+||||+||+++.++.++|+|||++.....
T Consensus 98 ~~~~~~L~~~~~------~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (297)
T 3fxz_A 98 YLAGGSLTDVVT------ETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168 (297)
T ss_dssp CCTTCBHHHHHH------HSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred CCCCCCHHHHHh------hcCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCC
Confidence 999999999984 235889999999999999999999999 99999999999999999999999999876554
Q ss_pred ChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcCcH
Q 041031 164 SPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTK 243 (313)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (313)
... ......+|+.|+|||++.+..++.++||||||+++|+|++|..||......
T Consensus 169 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----------------------- 222 (297)
T 3fxz_A 169 EQS---KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL----------------------- 222 (297)
T ss_dssp TTC---CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----------------------
T ss_pred ccc---ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-----------------------
Confidence 322 233456899999999999999999999999999999999999999654321
Q ss_pred HHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 244 DFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 244 ~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
+....+.....+... .....+..+.+|+.+||+.||.+|||+.|+++.
T Consensus 223 ~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 223 RALYLIATNGTPELQ-NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp HHHHHHHHHCSCCCS-CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHHHhCCCCCCC-CccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 111111111111111 233456678899999999999999999999874
No 28
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.4e-46 Score=324.99 Aligned_cols=258 Identities=24% Similarity=0.416 Sum_probs=210.2
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc---cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEee
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK---SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYEY 84 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~---~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e~ 84 (313)
.++|.+.+.||+|+||.||+|.+. ++.+|+|.+.... .+.+.+|+++++.+ ||||+++++++.+.+..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 578999999999999999999987 7889999886543 44578999999999 99999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccccCC
Q 041031 85 AQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHS 164 (313)
Q Consensus 85 ~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~~~ 164 (313)
+++++|.+++. .....+++..++.++.|++.||+|||+++ ++|+||||+||+++.++.++|+|||++......
T Consensus 89 ~~~~~L~~~l~----~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 161 (310)
T 3s95_A 89 IKGGTLRGIIK----SMDSQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDE 161 (310)
T ss_dssp CTTCBHHHHHH----HCCTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC--
T ss_pred cCCCcHHHHHH----hccCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceecccc
Confidence 99999999995 33467899999999999999999999999 999999999999999999999999999876543
Q ss_pred hhhhh-----------hcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHH
Q 041031 165 PEIAA-----------AASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVD 233 (313)
Q Consensus 165 ~~~~~-----------~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~ 233 (313)
..... ......+|+.|+|||++.+..++.++||||||+++|+|++|..||...............
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~---- 237 (310)
T 3s95_A 162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVR---- 237 (310)
T ss_dssp ------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHH----
T ss_pred cccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhh----
Confidence 22111 111346899999999999999999999999999999999999998765443221111110
Q ss_pred HHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhc
Q 041031 234 YMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILIS 299 (313)
Q Consensus 234 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 299 (313)
..+.....+ ..+..+.+++.+||+.||++|||+.++++.|+.+...
T Consensus 238 -------------~~~~~~~~~-------~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 238 -------------GFLDRYCPP-------NCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp -------------HHHHHTCCT-------TCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -------------ccccccCCC-------CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 111111111 2233588899999999999999999999999998865
No 29
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=6.1e-47 Score=335.95 Aligned_cols=247 Identities=23% Similarity=0.338 Sum_probs=204.1
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc---------cHHHHHHHHHHHhc-CCCceeeeeEEEeCCe
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK---------SKEFSSELKILCKV-HSNLIELIGYAAGGDS 77 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~---------~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~ 77 (313)
..+.|.+.+.||+|+||.||+|.++ ++.+|+|++.... .+.+.+|+.+++.+ ||||+++++++.+.+.
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 5678999999999999999999987 7889999987542 35688999999999 9999999999999999
Q ss_pred EEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCC----cEEEe
Q 041031 78 LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF----RAKIA 153 (313)
Q Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~----~~~l~ 153 (313)
+++||||+.+++|.+++. ....+++..++.++.|++.||.|||+++ ++|+||||+||+++.++ .++|+
T Consensus 90 ~~lv~e~~~gg~L~~~l~-----~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~ 161 (361)
T 2yab_A 90 VVLILELVSGGELFDFLA-----QKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLI 161 (361)
T ss_dssp EEEEEECCCSCBHHHHHT-----TCSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEEC
T ss_pred EEEEEEcCCCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEE
Confidence 999999999999999993 4567999999999999999999999999 99999999999998776 79999
Q ss_pred eccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHH
Q 041031 154 DFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVD 233 (313)
Q Consensus 154 dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~ 233 (313)
|||++....... ......+|+.|+|||++.+..++.++||||||+++|+|++|..||.+....
T Consensus 162 DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~------------- 224 (361)
T 2yab_A 162 DFGLAHEIEDGV----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ------------- 224 (361)
T ss_dssp CCSSCEECCTTC----CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-------------
T ss_pred ecCCceEcCCCC----ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH-------------
Confidence 999998765432 223356899999999999999999999999999999999999999754321
Q ss_pred HHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 041031 234 YMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAI 291 (313)
Q Consensus 234 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 291 (313)
+....+...............+..+.+|+.+||..||.+|||+.|+++
T Consensus 225 ----------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 225 ----------ETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp ----------HHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ----------HHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111111111000000011223457889999999999999999999985
No 30
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=4.8e-47 Score=323.50 Aligned_cols=255 Identities=22% Similarity=0.385 Sum_probs=210.5
Q ss_pred HhcCccccceeccCCeEEEEEeEEC-CcceEEEeccccc--cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEeec
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR-GKNAAIKQMKNTK--SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYEYA 85 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~-~~~~aiK~~~~~~--~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e~~ 85 (313)
..++|++.+.||+|+||.||+|.+. +..||+|.+.... .+.+.+|+.+++.+ ||||+++++++.+.+..++||||+
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 4678999999999999999999988 5579999997653 55688999999999 999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccccCCh
Q 041031 86 QNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSP 165 (313)
Q Consensus 86 ~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~~~~ 165 (313)
++++|.+++. .....+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||.+.......
T Consensus 86 ~~~~L~~~l~----~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 158 (268)
T 3sxs_A 86 SNGCLLNYLR----SHGKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ 158 (268)
T ss_dssp TTCBHHHHHH----HHGGGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTTC
T ss_pred CCCcHHHHHH----HcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchhh
Confidence 9999999985 23346899999999999999999999999 9999999999999999999999999988665432
Q ss_pred hhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchhHHHHHHHHhcCcHH
Q 041031 166 EIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKD 244 (313)
Q Consensus 166 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (313)
. .......+++.|+|||++.+..++.++||||||+++|+|++ |..||...... +
T Consensus 159 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----------------------~ 213 (268)
T 3sxs_A 159 Y--VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS-----------------------E 213 (268)
T ss_dssp E--EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH-----------------------H
T ss_pred h--hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH-----------------------H
Confidence 2 12223345678999999999889999999999999999999 99999654321 1
Q ss_pred HHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhc
Q 041031 245 FMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILIS 299 (313)
Q Consensus 245 ~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 299 (313)
....+...... ......+..+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 214 ~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 214 VVLKVSQGHRL---YRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp HHHHHHTTCCC---CCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred HHHHHHcCCCC---CCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 11111111111 11223345788999999999999999999999999988654
No 31
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.2e-47 Score=334.84 Aligned_cols=246 Identities=24% Similarity=0.366 Sum_probs=204.7
Q ss_pred HHHhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEE
Q 041031 8 RDATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLF 79 (313)
Q Consensus 8 ~~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~ 79 (313)
....++|++.+.||+|+||.||+|.+. ++.||||++.... ...+.+|+++++.+ ||||+++++++...+..+
T Consensus 11 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 90 (328)
T 3fe3_A 11 QPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLY 90 (328)
T ss_dssp CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CCccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEE
Confidence 345689999999999999999999986 8899999986542 34577899999999 999999999999999999
Q ss_pred EEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccc
Q 041031 80 LVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVK 159 (313)
Q Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~ 159 (313)
+||||+++++|.+++. ....+++..++.++.|++.||+|||+++ ++|+||||+||+++.++.+||+|||++.
T Consensus 91 lv~e~~~~~~L~~~l~-----~~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~ 162 (328)
T 3fe3_A 91 LIMEYASGGEVFDYLV-----AHGRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSN 162 (328)
T ss_dssp EEECCCTTCBHHHHHH-----HHCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCG
T ss_pred EEEECCCCCcHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCce
Confidence 9999999999999984 3456899999999999999999999999 9999999999999999999999999987
Q ss_pred cccCChhhhhhcccccccccccCCccccCCCCC-CccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHH
Q 041031 160 LLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVT-TKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238 (313)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~-~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (313)
...... ......+|+.|+|||++.+..+. .++|||||||++|+|++|..||.+....
T Consensus 163 ~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------------------ 220 (328)
T 3fe3_A 163 EFTVGG----KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK------------------ 220 (328)
T ss_dssp GGSSSC----GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH------------------
T ss_pred ecCCCC----ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH------------------
Confidence 655432 22334689999999999988765 7899999999999999999999754321
Q ss_pred hcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 239 FNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
+....+... .. ......+..+.+|+++||..||.+|||+.|+++.
T Consensus 221 -----~~~~~i~~~---~~-~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 221 -----ELRERVLRG---KY-RIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp -----HHHHHHHHC---CC-CCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred -----HHHHHHHhC---CC-CCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 111112111 11 1122345678889999999999999999999875
No 32
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=3.2e-47 Score=333.31 Aligned_cols=272 Identities=25% Similarity=0.386 Sum_probs=210.3
Q ss_pred hcCccccceeccCCeEEEEEeEECCcceEEEeccccccHH--HHHHHHHHHhc-CCCceeeeeEEEeCC----eEEEEEe
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKE--FSSELKILCKV-HSNLIELIGYAAGGD----SLFLVYE 83 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~aiK~~~~~~~~~--~~~e~~~l~~l-h~~i~~~~~~~~~~~----~~~lv~e 83 (313)
.++|++.++||+|+||.||+|++.++.||||++....... ...|+.+++.+ ||||+++++++.... .+++|||
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e 102 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITA 102 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEECCCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEe
Confidence 4689999999999999999999999999999997665333 45677778888 999999999998744 4799999
Q ss_pred ecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcC----------CCCceEEeccCCCCeeeCCCCcEEEe
Q 041031 84 YAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQY----------TKPYYVHRDVKTSNILLDSNFRAKIA 153 (313)
Q Consensus 84 ~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~----------~~~~i~h~di~p~nil~~~~~~~~l~ 153 (313)
|+++|+|.+++.. ..+++..++.++.|++.||+|||+. + ++|+||||+||+++.++.+||+
T Consensus 103 ~~~~g~L~~~l~~------~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~---ivH~Dlkp~Nill~~~~~~kL~ 173 (322)
T 3soc_A 103 FHEKGSLSDFLKA------NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA---ISHRDIKSKNVLLKNNLTACIA 173 (322)
T ss_dssp CCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE---EECSCCSGGGEEECTTCCEEEC
T ss_pred cCCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC---EEeCCCChHhEEECCCCeEEEc
Confidence 9999999999942 3489999999999999999999999 8 9999999999999999999999
Q ss_pred eccccccccCChhhhhhcccccccccccCCccccCC-----CCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccc
Q 041031 154 DFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG-----CVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEH 228 (313)
Q Consensus 154 dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-----~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~ 228 (313)
|||++......... .......+|+.|+|||++.+. .++.++|||||||++|+|+||..||.+........+...
T Consensus 174 DFg~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 252 (322)
T 3soc_A 174 DFGLALKFEAGKSA-GDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEE 252 (322)
T ss_dssp CCTTCEEECTTSCC-CCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHH
T ss_pred cCCcccccccccCc-cccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhh
Confidence 99999765543221 122234689999999999863 456788999999999999999999987655432222110
Q ss_pred hhHHHHHHHHhcCcHHHHHHh-hhhcCCCCCC--CCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhc
Q 041031 229 RSLVDYMLAVFNDTKDFMAKL-TECLDPNLTR--YHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILIS 299 (313)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~--~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 299 (313)
. ...+...+....+ .....+.+.. .....+..+.+|+.+||+.||++|||+.+++++|+++...
T Consensus 253 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 253 I-------GQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp H-------CSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred h-------ccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 0 0001111111111 1112222222 2334567799999999999999999999999999998753
No 33
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.6e-47 Score=334.87 Aligned_cols=250 Identities=23% Similarity=0.349 Sum_probs=199.9
Q ss_pred HHHhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEE
Q 041031 8 RDATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFL 80 (313)
Q Consensus 8 ~~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~l 80 (313)
....++|++.+.||+|+||.||+|.+. ++.||||++.... ...+.+|+++++.+ ||||+++++++...+..++
T Consensus 6 ~~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l 85 (347)
T 3zgw_A 6 DELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFM 85 (347)
T ss_dssp TTTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEE
Confidence 446789999999999999999999986 8899999986543 44688999999999 9999999999999999999
Q ss_pred EEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccccc
Q 041031 81 VYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKL 160 (313)
Q Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~ 160 (313)
||||+++++|.+++. ....+++..++.++.|++.||.|||+.+ ++|+||||+||++++++.+||+|||++..
T Consensus 86 v~E~~~gg~L~~~l~-----~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 157 (347)
T 3zgw_A 86 VLEYCPGGELFDYII-----SQDRLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAK 157 (347)
T ss_dssp EEECCTTCBHHHHHH-----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEeCCCCCCHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCccHHHEEEcCCCCEEEEeccCccc
Confidence 999999999999984 3456999999999999999999999999 99999999999999999999999999876
Q ss_pred ccCChhhhhhcccccccccccCCccccCCCC-CCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHh
Q 041031 161 LEHSPEIAAAASRIVGTFGYLAPEYVRDGCV-TTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF 239 (313)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (313)
...... .......+|+.|+|||++.+..+ +.++|||||||++|+|++|..||......
T Consensus 158 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~------------------- 216 (347)
T 3zgw_A 158 PKGNKD--YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM------------------- 216 (347)
T ss_dssp ----------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH-------------------
T ss_pred ccCCCC--ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH-------------------
Confidence 543322 12233468999999999998775 88999999999999999999999754321
Q ss_pred cCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 041031 240 NDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLS 294 (313)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~ 294 (313)
+....+.... .. .....+..+.+|+.+||+.||.+|||+.|+++.-+
T Consensus 217 ----~~~~~i~~~~-~~---~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~hp~ 263 (347)
T 3zgw_A 217 ----ALYKKIMRGK-YD---VPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPW 263 (347)
T ss_dssp ----HHHHHHHHTC-CC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTCHH
T ss_pred ----HHHHHHHcCC-CC---CCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcCcc
Confidence 1111111111 11 12234456788999999999999999999997644
No 34
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.2e-46 Score=323.56 Aligned_cols=255 Identities=22% Similarity=0.395 Sum_probs=209.9
Q ss_pred HhcCccccceeccCCeEEEEEeEEC-CcceEEEecccc--ccHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEeec
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR-GKNAAIKQMKNT--KSKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYEYA 85 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~-~~~~aiK~~~~~--~~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e~~ 85 (313)
..++|++.+.||+|+||.||+|.+. +..||+|++... ..+.+.+|+.+++.+ ||||+++++++.+.+..++||||+
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 4578999999999999999999988 568999999865 356688999999999 999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccccCCh
Q 041031 86 QNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSP 165 (313)
Q Consensus 86 ~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~~~~ 165 (313)
.+++|.+++. .....+++..++.++.|++.||+|||+++ ++|+||||+||+++.++.++|+|||++.......
T Consensus 102 ~~~~L~~~l~----~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 174 (283)
T 3gen_A 102 ANGCLLNYLR----EMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174 (283)
T ss_dssp TTCBHHHHHH----CGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH
T ss_pred CCCcHHHHHH----HhccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEccccccccccccc
Confidence 9999999995 22456899999999999999999999999 9999999999999999999999999988665432
Q ss_pred hhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchhHHHHHHHHhcCcHH
Q 041031 166 EIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKD 244 (313)
Q Consensus 166 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (313)
. .......+++.|+|||++.+..++.++||||||+++|+|++ |..||...... +
T Consensus 175 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~-----------------------~ 229 (283)
T 3gen_A 175 Y--TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-----------------------E 229 (283)
T ss_dssp H--HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-----------------------H
T ss_pred c--ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh-----------------------H
Confidence 2 22223356788999999998899999999999999999998 99999754321 1
Q ss_pred HHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhc
Q 041031 245 FMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILIS 299 (313)
Q Consensus 245 ~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 299 (313)
....+....... .....+..+.+++.+||+.||.+|||+.++++.|.++..+
T Consensus 230 ~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 230 TAEHIAQGLRLY---RPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp HHHHHHTTCCCC---CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHhcccCCC---CCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 222222222221 2223346788999999999999999999999999998865
No 35
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.9e-47 Score=331.34 Aligned_cols=251 Identities=18% Similarity=0.251 Sum_probs=205.6
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc--cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEee
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK--SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYEY 84 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~--~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e~ 84 (313)
+.++|.+.+.||+|+||.||+|.+. ++.+|+|.+.... ...+.+|+.+++.+ ||||+++++++.+.+..++||||
T Consensus 3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 4689999999999999999999987 7889999987553 34578999999999 99999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCC--CCcEEEeecccccccc
Q 041031 85 AQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDS--NFRAKIADFGLVKLLE 162 (313)
Q Consensus 85 ~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~--~~~~~l~dfg~~~~~~ 162 (313)
+++++|.+++. .....+++..++.++.|++.||.|||+++ ++|+||||+||+++. ++.++|+|||++....
T Consensus 83 ~~g~~L~~~l~----~~~~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~ 155 (321)
T 1tki_A 83 ISGLDIFERIN----TSAFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK 155 (321)
T ss_dssp CCCCBHHHHHT----SSSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECC
T ss_pred CCCCCHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeECC
Confidence 99999999984 33356899999999999999999999999 999999999999987 7899999999998765
Q ss_pred CChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcCc
Q 041031 163 HSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDT 242 (313)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (313)
... ......+++.|+|||++.+..++.++||||||+++|+|++|..||......
T Consensus 156 ~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---------------------- 209 (321)
T 1tki_A 156 PGD----NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ---------------------- 209 (321)
T ss_dssp TTC----EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH----------------------
T ss_pred CCC----ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH----------------------
Confidence 432 223356899999999999988999999999999999999999999754321
Q ss_pred HHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 041031 243 KDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLS 294 (313)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~ 294 (313)
+....+...............+..+.+|+.+||..||.+|||+.|+++.-+
T Consensus 210 -~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~ 260 (321)
T 1tki_A 210 -QIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPW 260 (321)
T ss_dssp -HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred -HHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChh
Confidence 111111111000000011233567889999999999999999999997543
No 36
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.5e-46 Score=335.07 Aligned_cols=262 Identities=24% Similarity=0.413 Sum_probs=212.0
Q ss_pred hcCccccceeccCCeEEEEEeEEC---------CcceEEEeccccc----cHHHHHHHHHHHhc--CCCceeeeeEEEeC
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR---------GKNAAIKQMKNTK----SKEFSSELKILCKV--HSNLIELIGYAAGG 75 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~---------~~~~aiK~~~~~~----~~~~~~e~~~l~~l--h~~i~~~~~~~~~~ 75 (313)
.++|.+.+.||+|+||.||+|++. +..||||.++... .+.+.+|+.+++.+ ||||+++++++.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 468999999999999999999873 3459999997653 34578899999999 99999999999999
Q ss_pred CeEEEEEeecCCCChhhhhcCCCC-----------CCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeee
Q 041031 76 DSLFLVYEYAQNGALSDHLHWPSV-----------KGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILL 144 (313)
Q Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~~-----------~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~ 144 (313)
+.+++||||+++|+|.+++..... .....+++..++.++.|++.||.|||+++ ++|+||||+||++
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEE
Confidence 999999999999999999864321 11245889999999999999999999999 9999999999999
Q ss_pred CCCCcEEEeeccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCC
Q 041031 145 DSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNN 223 (313)
Q Consensus 145 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~ 223 (313)
+.++.+||+|||++......... .......+++.|+|||++.+..++.++|||||||++|+|++ |..||.+....
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~--- 312 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYY-KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE--- 312 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTT-CTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---
T ss_pred CCCCCEEEccccCCcccCcccce-ecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH---
Confidence 99999999999999865543221 12222356789999999999999999999999999999999 99999754321
Q ss_pred ccccchhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcccc
Q 041031 224 QYTEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSKE 302 (313)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~ 302 (313)
+....+...... .....++..+.+++.+||+.||.+|||+.++++.|++++....+
T Consensus 313 --------------------~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~~ 368 (370)
T 2psq_A 313 --------------------ELFKLLKEGHRM---DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 368 (370)
T ss_dssp --------------------GHHHHHHTTCCC---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred --------------------HHHHHHhcCCCC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhcc
Confidence 112222222111 12334556789999999999999999999999999999875443
No 37
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=4.9e-47 Score=327.98 Aligned_cols=274 Identities=25% Similarity=0.411 Sum_probs=206.4
Q ss_pred HhcCccccceeccCCeEEEEEeEE------CCcceEEEecccccc---HHHHHHHHHHHhc-CCCceeeeeEEEe--CCe
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKL------RGKNAAIKQMKNTKS---KEFSSELKILCKV-HSNLIELIGYAAG--GDS 77 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~------~~~~~aiK~~~~~~~---~~~~~e~~~l~~l-h~~i~~~~~~~~~--~~~ 77 (313)
..++|++.+.||+|+||.||+|++ .++.||||.+..... +.+.+|+.+++.+ ||||+++++++.. ...
T Consensus 8 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 87 (295)
T 3ugc_A 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 87 (295)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTS
T ss_pred CHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCc
Confidence 457899999999999999999984 278899999876543 4577899999999 9999999999854 456
Q ss_pred EEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccc
Q 041031 78 LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGL 157 (313)
Q Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~ 157 (313)
+++||||+++++|.+++. .....+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||+
T Consensus 88 ~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~ 160 (295)
T 3ugc_A 88 LKLIMEYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGL 160 (295)
T ss_dssp CEEEEECCTTCBHHHHHH----HCGGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCS
T ss_pred eEEEEEeCCCCCHHHHHH----hcccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCcc
Confidence 899999999999999995 23345899999999999999999999999 99999999999999999999999999
Q ss_pred cccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHH
Q 041031 158 VKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLA 237 (313)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 237 (313)
+.................++..|+|||++.+..++.++||||||+++|+|++|..||...... .......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~----------~~~~~~~ 230 (295)
T 3ugc_A 161 TKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE----------FMRMIGN 230 (295)
T ss_dssp CC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH----------HHHHHCT
T ss_pred cccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH----------HHhhhcC
Confidence 987654433222333345677899999999999999999999999999999999998543210 0000000
Q ss_pred HhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcc
Q 041031 238 VFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISS 300 (313)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 300 (313)
...........................+..+.+++.+||+.||.+|||+.+++++|+++..+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 231 DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp TCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred ccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 000000001111111111112234455678999999999999999999999999999987653
No 38
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=7.8e-46 Score=324.31 Aligned_cols=258 Identities=23% Similarity=0.384 Sum_probs=213.4
Q ss_pred CcChHHHHHHhcC----------ccccceeccCCeEEEEEeEEC--CcceEEEeccccc---cHHHHHHHHHHHhc-CCC
Q 041031 1 MFSYNEVRDATSN----------FSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK---SKEFSSELKILCKV-HSN 64 (313)
Q Consensus 1 ~~~~~~~~~~~~~----------y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~---~~~~~~e~~~l~~l-h~~ 64 (313)
.||++.++.+.+. |...+.||+|+||.||+|.+. ++.||||++.... .+.+.+|+.+++.+ |||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n 103 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTT
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCC
Confidence 3788888888765 788899999999999999987 8899999986543 45578999999999 999
Q ss_pred ceeeeeEEEeCCeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeee
Q 041031 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILL 144 (313)
Q Consensus 65 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~ 144 (313)
|+++++++...+..++||||+++++|.+++. ...+++..++.++.|++.||.|||+.+ ++|+||||+||++
T Consensus 104 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~------~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll 174 (321)
T 2c30_A 104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVS------QVRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILL 174 (321)
T ss_dssp BCCEEEEEEETTEEEEEECCCCSCBHHHHHT------TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEE
T ss_pred cceEEEEEEECCEEEEEEecCCCCCHHHHHH------hcCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEE
Confidence 9999999999999999999999999999984 246899999999999999999999999 9999999999999
Q ss_pred CCCCcEEEeeccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCc
Q 041031 145 DSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQ 224 (313)
Q Consensus 145 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~ 224 (313)
+.++.++|+|||++........ ......+|+.|+|||++.+..++.++||||||+++|+|++|..||......
T Consensus 175 ~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~---- 247 (321)
T 2c30_A 175 TLDGRVKLSDFGFCAQISKDVP---KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV---- 247 (321)
T ss_dssp CTTCCEEECCCTTCEECCSSSC---CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----
T ss_pred CCCCcEEEeeeeeeeecccCcc---ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----
Confidence 9999999999999876554321 223346899999999999999999999999999999999999999654321
Q ss_pred cccchhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 041031 225 YTEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLS 294 (313)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~ 294 (313)
+....+.....+.+. .....+..+.+++.+||+.||++|||+.++++.-.
T Consensus 248 -------------------~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~ 297 (321)
T 2c30_A 248 -------------------QAMKRLRDSPPPKLK-NSHKVSPVLRDFLERMLVRDPQERATAQELLDHPF 297 (321)
T ss_dssp -------------------HHHHHHHHSSCCCCT-TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred -------------------HHHHHHhcCCCCCcC-ccccCCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 112222222222221 12344567889999999999999999999998644
No 39
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.8e-46 Score=327.85 Aligned_cols=247 Identities=23% Similarity=0.366 Sum_probs=203.8
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc---------cHHHHHHHHHHHhc-CCCceeeeeEEEeCCe
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK---------SKEFSSELKILCKV-HSNLIELIGYAAGGDS 77 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~---------~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~ 77 (313)
..+.|.+.+.||+|+||.||+|.+. ++.+|+|.+.... .+.+.+|+.+++.+ ||||+++++++.+.+.
T Consensus 9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 88 (326)
T 2y0a_A 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 88 (326)
T ss_dssp HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence 4567999999999999999999987 7889999986432 45688999999999 9999999999999999
Q ss_pred EEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCC----cEEEe
Q 041031 78 LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF----RAKIA 153 (313)
Q Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~----~~~l~ 153 (313)
.++||||+++++|.+++. ....+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++ .++|+
T Consensus 89 ~~lv~e~~~~~~L~~~l~-----~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~ 160 (326)
T 2y0a_A 89 VILILELVAGGELFDFLA-----EKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKII 160 (326)
T ss_dssp EEEEEECCCSCBHHHHHT-----TSSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEEC
T ss_pred EEEEEEcCCCCCHHHHHH-----hcCCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEE
Confidence 999999999999999993 4567999999999999999999999999 99999999999998877 79999
Q ss_pred eccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHH
Q 041031 154 DFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVD 233 (313)
Q Consensus 154 dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~ 233 (313)
|||++....... ......+|+.|+|||++.+..++.++||||||+++|+|++|..||.+....
T Consensus 161 Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------------- 223 (326)
T 2y0a_A 161 DFGLAHKIDFGN----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ------------- 223 (326)
T ss_dssp CCTTCEECCTTS----CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-------------
T ss_pred ECCCCeECCCCC----ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH-------------
Confidence 999998765322 222346899999999999999999999999999999999999999654321
Q ss_pred HHHHHhcCcHHHHHHhhhhcCCCCCC-CCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 234 YMLAVFNDTKDFMAKLTECLDPNLTR-YHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 234 ~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
+....+.... ..... .....+..+.+|+++||..||.+|||+.++++.
T Consensus 224 ----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 224 ----------ETLANVSAVN-YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp ----------HHHHHHHHTC-CCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ----------HHHHHHHhcC-CCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1111111111 11100 112334578899999999999999999999963
No 40
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=3.4e-46 Score=323.37 Aligned_cols=260 Identities=27% Similarity=0.422 Sum_probs=206.4
Q ss_pred HhcCccccceeccCCeEEEEEeEECCcceEEEeccccccHHHHHHHHHHHh--c-CCCceeeeeEEEe----CCeEEEEE
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCK--V-HSNLIELIGYAAG----GDSLFLVY 82 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~aiK~~~~~~~~~~~~e~~~l~~--l-h~~i~~~~~~~~~----~~~~~lv~ 82 (313)
..++|++.+.||+|+||.||+|++.++.||||++..........|.+++.. + ||||+++++++.. ....++||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 85 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLIT 85 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred ccCcEEEEEeeccCCCcEEEEEEECCEEEEEEEeccccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEeh
Confidence 467999999999999999999999999999999988877778888888887 5 9999999998654 34689999
Q ss_pred eecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHh--------cCCCCceEEeccCCCCeeeCCCCcEEEee
Q 041031 83 EYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIH--------QYTKPYYVHRDVKTSNILLDSNFRAKIAD 154 (313)
Q Consensus 83 e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh--------~~~~~~i~h~di~p~nil~~~~~~~~l~d 154 (313)
||+++++|.+++. ...+++..++.++.|++.||+||| +.+ ++|+||||+||+++.++.+||+|
T Consensus 86 e~~~~g~L~~~l~------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~~kl~D 156 (301)
T 3q4u_A 86 HYHEMGSLYDYLQ------LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQCCIAD 156 (301)
T ss_dssp CCCTTCBHHHHHT------TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSCEEECC
T ss_pred hhccCCCHHHHHh------hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCCEEEee
Confidence 9999999999983 346899999999999999999999 888 99999999999999999999999
Q ss_pred ccccccccCChhhh-hhcccccccccccCCccccCC------CCCCccchhhHHHHHHHHHhC----------CCCccCC
Q 041031 155 FGLVKLLEHSPEIA-AAASRIVGTFGYLAPEYVRDG------CVTTKSDVYAFGVVLMELITG----------QQALSRD 217 (313)
Q Consensus 155 fg~~~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~------~~~~~~DiwslG~~l~~~~tg----------~~p~~~~ 217 (313)
||++.......... .......+|+.|+|||++.+. .++.++||||||+++|+|++| ..||...
T Consensus 157 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~ 236 (301)
T 3q4u_A 157 LGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDV 236 (301)
T ss_dssp CTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred CCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccccc
Confidence 99987655432211 112234689999999999876 455789999999999999999 7777544
Q ss_pred CCCCCCccccchhHHHHHHHHhcCcHHHHHHhh-hhcCCCCCC--CCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 041031 218 ANPGNNQYTEHRSLVDYMLAVFNDTKDFMAKLT-ECLDPNLTR--YHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLS 294 (313)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~--~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~ 294 (313)
.... .... ....... ....+.... .....+..+.+|+.+||+.||++|||+.++++.|+
T Consensus 237 ~~~~-------~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 298 (301)
T 3q4u_A 237 VPND-------PSFE-----------DMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLT 298 (301)
T ss_dssp SCSS-------CCHH-----------HHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHH
T ss_pred CCCC-------cchh-----------hhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHh
Confidence 3321 0000 1111110 111111111 23456788999999999999999999999999998
Q ss_pred HH
Q 041031 295 HI 296 (313)
Q Consensus 295 ~~ 296 (313)
++
T Consensus 299 ~i 300 (301)
T 3q4u_A 299 KI 300 (301)
T ss_dssp HH
T ss_pred cc
Confidence 75
No 41
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=4.9e-46 Score=338.38 Aligned_cols=251 Identities=20% Similarity=0.274 Sum_probs=204.8
Q ss_pred HHHhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEE
Q 041031 8 RDATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLF 79 (313)
Q Consensus 8 ~~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~ 79 (313)
....++|++.+.||+|+||.||+|.+. ++.+|+|++.... .+.+.+|+.+++.+ ||||+++++++.+.+..+
T Consensus 7 ~~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 86 (444)
T 3soa_A 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHY 86 (444)
T ss_dssp CHHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEE
T ss_pred ccccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEE
Confidence 356788999999999999999999987 8889999987543 34578999999999 999999999999999999
Q ss_pred EEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeC---CCCcEEEeecc
Q 041031 80 LVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLD---SNFRAKIADFG 156 (313)
Q Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~---~~~~~~l~dfg 156 (313)
+||||+.+|+|.+.+. ....+++..+..++.|++.||.|||+++ ++|+||||+||+++ .++.+||+|||
T Consensus 87 lv~E~~~gg~L~~~i~-----~~~~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG 158 (444)
T 3soa_A 87 LIFDLVTGGELFEDIV-----AREYYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFG 158 (444)
T ss_dssp EEECCCBCCBHHHHHH-----HCSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCS
T ss_pred EEEEeCCCCCHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCc
Confidence 9999999999999984 3466999999999999999999999999 99999999999998 46789999999
Q ss_pred ccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHH
Q 041031 157 LVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYML 236 (313)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 236 (313)
++........ ......+|+.|+|||++.+..++.++|||||||++|+|++|..||.+....
T Consensus 159 ~a~~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~---------------- 219 (444)
T 3soa_A 159 LAIEVEGEQQ---AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH---------------- 219 (444)
T ss_dssp SCBCCCTTCC---BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----------------
T ss_pred eeEEecCCCc---eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH----------------
Confidence 9976554321 223356899999999999999999999999999999999999999654321
Q ss_pred HHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 237 AVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
+....+...............+..+.+|+.+||+.||.+|||+.|+++.
T Consensus 220 -------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 220 -------RLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp -------HHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred -------HHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 1122222211111111223445678899999999999999999999864
No 42
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=3.1e-46 Score=331.92 Aligned_cols=249 Identities=22% Similarity=0.323 Sum_probs=204.8
Q ss_pred HHhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEE
Q 041031 9 DATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFL 80 (313)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~l 80 (313)
...++|.+.+.||+|+||.||+|.++ ++.||+|++.... .+.+.+|+.+++.+ ||||+++++++.+.+..++
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 45678999999999999999999987 7899999986543 34577899999999 9999999999999999999
Q ss_pred EEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCC---CcEEEeeccc
Q 041031 81 VYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSN---FRAKIADFGL 157 (313)
Q Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~---~~~~l~dfg~ 157 (313)
||||+.+++|.+.+. ....+++..++.++.|++.||.|||+++ ++|+||||+||+++.+ +.+||+|||+
T Consensus 106 v~e~~~gg~L~~~l~-----~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~ 177 (362)
T 2bdw_A 106 VFDLVTGGELFEDIV-----AREFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGL 177 (362)
T ss_dssp EECCCCSCBHHHHHT-----TCSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEecCCCCCHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCc
Confidence 999999999999983 4467899999999999999999999999 9999999999999864 4599999999
Q ss_pred cccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHH
Q 041031 158 VKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLA 237 (313)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 237 (313)
+....... ......+|+.|+|||++.+..++.++|||||||++|+|++|..||......
T Consensus 178 a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~----------------- 236 (362)
T 2bdw_A 178 AIEVNDSE----AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH----------------- 236 (362)
T ss_dssp CBCCTTCC----SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----------------
T ss_pred ceEecCCc----ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-----------------
Confidence 98665332 222356899999999999999999999999999999999999999654321
Q ss_pred HhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 238 VFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
+....+...............+..+.+|+.+||+.||.+|||+.++++.
T Consensus 237 ------~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 237 ------RLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp ------HHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ------HHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1112221111111111223445678999999999999999999999865
No 43
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=5.1e-46 Score=325.72 Aligned_cols=251 Identities=22% Similarity=0.360 Sum_probs=204.1
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEE
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVY 82 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~ 82 (313)
..++|++.+.||+|+||.||+|.+. ++.||||++.... .+.+.+|+.+++.+ ||||+++++++.+.+..++||
T Consensus 5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 84 (323)
T 3tki_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (323)
T ss_dssp TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 3579999999999999999999987 7889999986443 35588999999999 999999999999999999999
Q ss_pred eecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccccccc
Q 041031 83 EYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLE 162 (313)
Q Consensus 83 e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~ 162 (313)
||+++++|.+++. ....+++..++.++.|++.||+|||+++ ++|+||||+||+++.++.++|+|||++....
T Consensus 85 e~~~~~~L~~~l~-----~~~~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 156 (323)
T 3tki_A 85 EYCSGGELFDRIE-----PDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (323)
T ss_dssp ECCTTEEGGGGSB-----TTTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EcCCCCcHHHHHh-----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceec
Confidence 9999999999983 4567999999999999999999999999 9999999999999999999999999997654
Q ss_pred CChhhhhhcccccccccccCCccccCCCC-CCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcC
Q 041031 163 HSPEIAAAASRIVGTFGYLAPEYVRDGCV-TTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFND 241 (313)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (313)
.... ........+|+.|+|||++.+..+ +.++||||||+++|+|++|..||....... .
T Consensus 157 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-------~------------ 216 (323)
T 3tki_A 157 YNNR-ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-------Q------------ 216 (323)
T ss_dssp ETTE-ECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTS-------H------------
T ss_pred cCCc-ccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHH-------H------------
Confidence 3221 122234578999999999987765 778999999999999999999997654421 0
Q ss_pred cHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHH
Q 041031 242 TKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRL 293 (313)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l 293 (313)
........ ..........+..+.+|+.+||+.||.+|||+.|+++.-
T Consensus 217 --~~~~~~~~---~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~ 263 (323)
T 3tki_A 217 --EYSDWKEK---KTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDR 263 (323)
T ss_dssp --HHHHHHTT---CTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCT
T ss_pred --HHHHHhcc---cccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhCh
Confidence 00000000 011112234556788999999999999999999998753
No 44
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2.1e-46 Score=334.27 Aligned_cols=257 Identities=28% Similarity=0.473 Sum_probs=198.2
Q ss_pred hcCccccceeccCCeEEEEEeEEC-----CcceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR-----GKNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFL 80 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~-----~~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~l 80 (313)
.++|.+.+.||+|+||.||+|++. +..||||.++... ...+.+|+.+++++ ||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 357999999999999999999875 5679999987543 34578899999999 9999999999999999999
Q ss_pred EEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccccc
Q 041031 81 VYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKL 160 (313)
Q Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~ 160 (313)
||||+++++|.+++. .....+++..++.++.|++.||+|||+++ ++|+||||+||+++.++.+||+|||++..
T Consensus 124 v~e~~~~~sL~~~l~----~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 124 VTEYMENGSLDSFLR----KHDAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp EEECCTTCBHHHHHH----TTTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEeCCCCCcHHHHHH----hCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCccccc
Confidence 999999999999995 33457899999999999999999999999 99999999999999999999999999987
Q ss_pred ccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchhHHHHHHHHh
Q 041031 161 LEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLVDYMLAVF 239 (313)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (313)
...............+++.|+|||++.+..++.++||||||+++|+|++ |..||......
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~------------------- 257 (373)
T 2qol_A 197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ------------------- 257 (373)
T ss_dssp -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH-------------------
T ss_pred cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-------------------
Confidence 6543322222222345678999999999999999999999999999998 99999654321
Q ss_pred cCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcc
Q 041031 240 NDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISS 300 (313)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 300 (313)
+....+...... ......+..+.+++.+||+.||.+|||+.++++.|+++....
T Consensus 258 ----~~~~~i~~~~~~---~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 258 ----DVIKAVDEGYRL---PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp ----HHHHHHHTTEEC---CCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred ----HHHHHHHcCCCC---CCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 111222111111 122345567899999999999999999999999999997653
No 45
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=7.1e-46 Score=326.23 Aligned_cols=244 Identities=25% Similarity=0.349 Sum_probs=203.6
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEecccc------ccHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT------KSKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLV 81 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~------~~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv 81 (313)
.++|++++.||+|+||.||+|+++ ++.||+|+++.. ....+.+|..+++.+ ||||+++++++.+.+.+++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 578999999999999999999987 888999998643 345678899999999 99999999999999999999
Q ss_pred EeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccc
Q 041031 82 YEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL 161 (313)
Q Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~ 161 (313)
|||+++|+|.+++. ....+++..++.++.|++.||.|||+++ ++|+||||+||+++.+|.+||+|||++...
T Consensus 84 ~E~~~gg~L~~~l~-----~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 155 (337)
T 1o6l_A 84 MEYANGGELFFHLS-----RERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEG 155 (337)
T ss_dssp EECCTTCBHHHHHH-----HHSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EeCCCCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhc
Confidence 99999999999984 3456899999999999999999999999 999999999999999999999999998754
Q ss_pred cCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcC
Q 041031 162 EHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFND 241 (313)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (313)
.... .......+|+.|+|||++.+..++.++|+|||||++|+|++|..||......
T Consensus 156 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--------------------- 211 (337)
T 1o6l_A 156 ISDG---ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------------------- 211 (337)
T ss_dssp CCTT---CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH---------------------
T ss_pred ccCC---CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH---------------------
Confidence 3221 1233457899999999999999999999999999999999999999654321
Q ss_pred cHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCC-----CHHHHHHH
Q 041031 242 TKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRP-----DMSNAAIR 292 (313)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-----s~~~ll~~ 292 (313)
+....+... ... .....+..+.+|+.+||+.||.+|| ++.++++.
T Consensus 212 --~~~~~i~~~-~~~---~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 212 --RLFELILME-EIR---FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp --HHHHHHHHC-CCC---CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred --HHHHHHHcC-CCC---CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 111111110 111 1234456788999999999999999 89998754
No 46
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.4e-46 Score=333.82 Aligned_cols=270 Identities=25% Similarity=0.391 Sum_probs=215.8
Q ss_pred cChHHHHHHhcCccccceeccCCeEEEEEeEEC-------CcceEEEeccccc----cHHHHHHHHHHHhc--CCCceee
Q 041031 2 FSYNEVRDATSNFSTSLKIGQGSYGSVYLGKLR-------GKNAAIKQMKNTK----SKEFSSELKILCKV--HSNLIEL 68 (313)
Q Consensus 2 ~~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~-------~~~~aiK~~~~~~----~~~~~~e~~~l~~l--h~~i~~~ 68 (313)
|+....+...++|++.+.||+|+||.||+|++. ++.||||.+.... .+.+.+|+.++..+ ||||+++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 344555667789999999999999999999853 4689999997643 23478999999999 8999999
Q ss_pred eeEEEeCCe-EEEEEeecCCCChhhhhcCCCCCC----------------------------------------------
Q 041031 69 IGYAAGGDS-LFLVYEYAQNGALSDHLHWPSVKG---------------------------------------------- 101 (313)
Q Consensus 69 ~~~~~~~~~-~~lv~e~~~~~~L~~~l~~~~~~~---------------------------------------------- 101 (313)
++++.+.+. .++||||+++|+|.+++.......
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 999987554 899999999999999996443210
Q ss_pred ---------------CCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccccCChh
Q 041031 102 ---------------KKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPE 166 (313)
Q Consensus 102 ---------------~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 166 (313)
...+++..++.++.|++.||+|||+++ ++|+||||+||+++.++.++|+|||++........
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 122889999999999999999999999 99999999999999999999999999986544322
Q ss_pred hhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchhHHHHHHHHhcCcHHH
Q 041031 167 IAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDF 245 (313)
Q Consensus 167 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (313)
. .......+|+.|+|||++.+..++.++||||||+++|+|++ |..||.+..... ..
T Consensus 249 ~-~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~----------------------~~ 305 (359)
T 3vhe_A 249 Y-VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----------------------EF 305 (359)
T ss_dssp C-EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH----------------------HH
T ss_pred c-hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH----------------------HH
Confidence 1 22233467889999999999999999999999999999998 999997654320 11
Q ss_pred HHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcc
Q 041031 246 MAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISS 300 (313)
Q Consensus 246 ~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 300 (313)
...+....... .....+..+.+++.+||+.||.+|||+.++++.|+.++.+.
T Consensus 306 ~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 306 CRRLKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp HHHHHHTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCC---CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 22222222222 22334567889999999999999999999999999988653
No 47
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=5.1e-46 Score=317.57 Aligned_cols=251 Identities=28% Similarity=0.441 Sum_probs=197.3
Q ss_pred HhcCccccceeccCCeEEEEEeEECCcceEEEeccccc-------cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEE
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTK-------SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLV 81 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~aiK~~~~~~-------~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv 81 (313)
..++|++.+.||+|+||.||+|.+.++.+|||++.... .+.+.+|+.+++.+ ||||+++++++.+.+..++|
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 5 DFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp CTTSEEEEEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred chhheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 35789999999999999999999999999999987532 34578899999999 99999999999999999999
Q ss_pred EeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCC--------CCcEEEe
Q 041031 82 YEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDS--------NFRAKIA 153 (313)
Q Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~--------~~~~~l~ 153 (313)
|||+++++|.+++. ...+++..++.++.|++.||+|||+++..+++|+||||+||+++. ++.++|+
T Consensus 85 ~e~~~~~~L~~~~~------~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~ 158 (271)
T 3dtc_A 85 MEFARGGPLNRVLS------GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKIT 158 (271)
T ss_dssp EECCTTEEHHHHHT------SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEEC
T ss_pred EEcCCCCCHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEc
Confidence 99999999999983 356899999999999999999999998444779999999999985 6789999
Q ss_pred eccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHH
Q 041031 154 DFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVD 233 (313)
Q Consensus 154 dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~ 233 (313)
|||.+........ ....+++.|+|||++.+..++.++||||||+++|+|++|..||......
T Consensus 159 Dfg~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------------- 220 (271)
T 3dtc_A 159 DFGLAREWHRTTK-----MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL------------- 220 (271)
T ss_dssp CCCC------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH-------------
T ss_pred cCCcccccccccc-----cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-------------
Confidence 9999876543221 2346899999999999999999999999999999999999999754321
Q ss_pred HHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHH
Q 041031 234 YMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHI 296 (313)
Q Consensus 234 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~ 296 (313)
...... .............+..+.+++.+||+.||.+|||+.++++.|+.+
T Consensus 221 ----------~~~~~~--~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 221 ----------AVAYGV--AMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp ----------HHHHHH--HTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred ----------HHHHhh--hcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 000000 011111112344556789999999999999999999999999864
No 48
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.6e-45 Score=320.32 Aligned_cols=259 Identities=30% Similarity=0.526 Sum_probs=205.7
Q ss_pred hcCccccceeccCCeEEEEEeEECCcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEee
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYEY 84 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e~ 84 (313)
.++|.+.++||+|+||.||+|.+.+ .+++|+++... .+.+.+|+.+++.+ ||||+++++++.. +..++||||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~e~ 112 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESSS-EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred ccceEEEeEecCCCCeEEEEEEECC-EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEEec
Confidence 5789999999999999999998875 48888876432 34577899999999 9999999998754 458899999
Q ss_pred cCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccccCC
Q 041031 85 AQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHS 164 (313)
Q Consensus 85 ~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~~~ 164 (313)
+.+++|.+++. .....+++..++.++.|++.||+|||+++ ++|+||||+||++++++.+||+|||++......
T Consensus 113 ~~~~~L~~~l~----~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~ 185 (307)
T 3lb7_A 113 CEGSSLYKHLH----VQETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp CSSCBHHHHHH----TSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCSSSEEECTTSCEEECCCCSSCC----
T ss_pred CCCCcHHHHHH----hcccCCCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCChhhEEEcCCCCEEEccCCCceecccc
Confidence 99999999985 34567999999999999999999999999 999999999999999999999999998764432
Q ss_pred hhhhhhcccccccccccCCcccc---CCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcC
Q 041031 165 PEIAAAASRIVGTFGYLAPEYVR---DGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFND 241 (313)
Q Consensus 165 ~~~~~~~~~~~~~~~~~aPE~~~---~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (313)
.. ........+++.|+|||++. +..++.++||||||+++|+|++|..||.......
T Consensus 186 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~-------------------- 244 (307)
T 3lb7_A 186 SG-SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-------------------- 244 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH--------------------
T ss_pred cc-cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH--------------------
Confidence 11 12223346899999999986 5668889999999999999999999997554320
Q ss_pred cHHHHHHhhh-hcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhccc
Q 041031 242 TKDFMAKLTE-CLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSK 301 (313)
Q Consensus 242 ~~~~~~~l~~-~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~ 301 (313)
.....+.. ...+.+......++..+.+|+.+||+.+|++|||+.++++.|+.+....+
T Consensus 245 --~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~p 303 (307)
T 3lb7_A 245 --QIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp --HHHHHHHHTCCCCCSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred --HHHHHHhcCCCCcchhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhcc
Confidence 11111111 12233333444566789999999999999999999999999999887654
No 49
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5.8e-46 Score=316.48 Aligned_cols=254 Identities=24% Similarity=0.420 Sum_probs=211.3
Q ss_pred hcCccccceeccCCeEEEEEeEEC-CcceEEEeccccc--cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEeecC
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR-GKNAAIKQMKNTK--SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYEYAQ 86 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~-~~~~aiK~~~~~~--~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (313)
.++|++.+.||+|+||.||+|.+. ++.+|+|.+.... .+.+.+|+.+++.+ ||||+++++++.+.+..+++||+++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 578999999999999999999986 7789999998653 46688999999999 9999999999999999999999999
Q ss_pred CCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccccCChh
Q 041031 87 NGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPE 166 (313)
Q Consensus 87 ~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 166 (313)
+++|.+++. .....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+........
T Consensus 87 ~~~L~~~~~----~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 159 (267)
T 3t9t_A 87 HGCLSDYLR----TQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 159 (267)
T ss_dssp TCBHHHHHH----HTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred CCcHHHHHh----hCcccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEcccccccccccccc
Confidence 999999985 23456899999999999999999999999 99999999999999999999999999886553221
Q ss_pred hhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchhHHHHHHHHhcCcHHH
Q 041031 167 IAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDF 245 (313)
Q Consensus 167 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (313)
.......+++.|+|||++.+..++.++||||||+++|+|++ |..||...... +.
T Consensus 160 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----------------------~~ 214 (267)
T 3t9t_A 160 --TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----------------------EV 214 (267)
T ss_dssp --HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----------------------HH
T ss_pred --cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH-----------------------HH
Confidence 22223456788999999998889999999999999999999 89999654321 11
Q ss_pred HHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhc
Q 041031 246 MAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILIS 299 (313)
Q Consensus 246 ~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 299 (313)
...+....... .....+..+.+++.+||+.||.+|||+.++++.|+++...
T Consensus 215 ~~~i~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 215 VEDISTGFRLY---KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp HHHHHTTCCCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHhcCCcCC---CCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 22222211111 2223456788999999999999999999999999998754
No 50
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=5.2e-46 Score=322.43 Aligned_cols=269 Identities=24% Similarity=0.381 Sum_probs=209.1
Q ss_pred hcCccccceeccCCeEEEEEeEE------CCcceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEeC--Ce
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKL------RGKNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAGG--DS 77 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~------~~~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~--~~ 77 (313)
...|++.+.||+|+||.||+|++ .++.||+|.+.... ...+.+|+.+++.+ ||||+++++++.+. +.
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 35689999999999999999984 27889999987543 35688999999999 99999999999876 67
Q ss_pred EEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccc
Q 041031 78 LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGL 157 (313)
Q Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~ 157 (313)
+++||||+++++|.+++. .....+++..++.++.|++.||+|||+++ ++|+||||+||+++.++.++|+|||.
T Consensus 100 ~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~ 172 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLP----KNKNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGL 172 (302)
T ss_dssp EEEEEECCTTCBHHHHHH----HHTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTT
T ss_pred EEEEEEeCCCCcHHHHHH----hccccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECcccc
Confidence 899999999999999984 23456899999999999999999999999 99999999999999999999999999
Q ss_pred cccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHH
Q 041031 158 VKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLA 237 (313)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 237 (313)
+.................++..|+|||++.+..++.++||||||+++|+|++|..|+..... .......
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----------~~~~~~~ 241 (302)
T 4e5w_A 173 TKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMA-----------LFLKMIG 241 (302)
T ss_dssp CEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHH-----------HHHHHHC
T ss_pred cccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhh-----------HHhhccC
Confidence 98766543322333345678889999999999999999999999999999999998743211 0000000
Q ss_pred HhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHH
Q 041031 238 VFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHIL 297 (313)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~ 297 (313)
...........................+..+.+|+.+||+.||.+|||+.+++++|+.++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 242 PTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp SCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 001111111112212222222234455678999999999999999999999999999875
No 51
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-45 Score=330.00 Aligned_cols=249 Identities=20% Similarity=0.292 Sum_probs=204.9
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc---cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEe
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK---SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYE 83 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~---~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e 83 (313)
..++|.+.+.||+|+||.||+|.+. ++.+|+|.+.... ...+.+|+.+++.+ ||||+++++++.+....++|||
T Consensus 49 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E 128 (387)
T 1kob_A 49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE 128 (387)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred cccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEE
Confidence 3578999999999999999999987 7889999987653 34578899999999 9999999999999999999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCC--CCcEEEeeccccccc
Q 041031 84 YAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDS--NFRAKIADFGLVKLL 161 (313)
Q Consensus 84 ~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~--~~~~~l~dfg~~~~~ 161 (313)
|+.+++|.+++. .....+++..++.++.|++.||.|||+++ ++|+||||+||+++. ++.++|+|||++...
T Consensus 129 ~~~gg~L~~~l~----~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~ 201 (387)
T 1kob_A 129 FLSGGELFDRIA----AEDYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKL 201 (387)
T ss_dssp CCCCCBHHHHTT----CTTCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred cCCCCcHHHHHH----hhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccceec
Confidence 999999999984 33457999999999999999999999999 999999999999974 577999999999876
Q ss_pred cCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcC
Q 041031 162 EHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFND 241 (313)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (313)
.... ......+|+.|+|||++.+..++.++|||||||++|+|++|..||.+....
T Consensus 202 ~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--------------------- 256 (387)
T 1kob_A 202 NPDE----IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL--------------------- 256 (387)
T ss_dssp CTTS----CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH---------------------
T ss_pred CCCc----ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH---------------------
Confidence 5432 222346899999999999999999999999999999999999999754321
Q ss_pred cHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 242 TKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
+....+...............+..+.+|+.+||+.||.+|||+.++++.
T Consensus 257 --~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 257 --ETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp --HHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred --HHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 1111121111111111223455678999999999999999999999864
No 52
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.3e-46 Score=334.67 Aligned_cols=254 Identities=26% Similarity=0.375 Sum_probs=208.1
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEe
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYE 83 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e 83 (313)
.++|.+.+.||+|+||.||+|.+. ++.||||.++... ...+.+|+++++.+ ||||+++++++.+.+..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 468999999999999999999997 7889999987653 23467899999999 9999999999999999999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccccC
Q 041031 84 YAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEH 163 (313)
Q Consensus 84 ~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~~ 163 (313)
|+++++|.+++. .....++...++.++.|++.||+|||+++ ++|+||||+||+++.++.+||+|||++.....
T Consensus 193 ~~~~g~L~~~l~----~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~ 265 (377)
T 3cbl_A 193 LVQGGDFLTFLR----TEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEAD 265 (377)
T ss_dssp CCTTCBHHHHHH----HHGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred cCCCCCHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence 999999999985 23346899999999999999999999999 99999999999999999999999999876443
Q ss_pred ChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchhHHHHHHHHhcCc
Q 041031 164 SPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLVDYMLAVFNDT 242 (313)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (313)
... ........++..|+|||++.+..++.++||||||+++|+|++ |..||......
T Consensus 266 ~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~---------------------- 322 (377)
T 3cbl_A 266 GVY-AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ---------------------- 322 (377)
T ss_dssp SEE-ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH----------------------
T ss_pred Cce-eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH----------------------
Confidence 211 111112235678999999998899999999999999999998 99999754321
Q ss_pred HHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHh
Q 041031 243 KDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILI 298 (313)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 298 (313)
+....+...... .....++..+.+|+.+||+.||.+|||+.+|++.|+.+..
T Consensus 323 -~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 323 -QTREFVEKGGRL---PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp -HHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -HHHHHHHcCCCC---CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 111122111111 1223455678899999999999999999999999998864
No 53
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-45 Score=330.42 Aligned_cols=263 Identities=25% Similarity=0.407 Sum_probs=214.1
Q ss_pred hcCccccceeccCCeEEEEEeEEC---------CcceEEEeccccc----cHHHHHHHHHHHhc--CCCceeeeeEEEeC
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR---------GKNAAIKQMKNTK----SKEFSSELKILCKV--HSNLIELIGYAAGG 75 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~---------~~~~aiK~~~~~~----~~~~~~e~~~l~~l--h~~i~~~~~~~~~~ 75 (313)
.++|.+.+.||+|+||.||+|++. +..||||++.... ...+.+|+++++.+ ||||+++++++...
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 478999999999999999999874 2469999987654 24577899999998 99999999999999
Q ss_pred CeEEEEEeecCCCChhhhhcCCCC-----------CCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeee
Q 041031 76 DSLFLVYEYAQNGALSDHLHWPSV-----------KGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILL 144 (313)
Q Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~~-----------~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~ 144 (313)
+..++||||+.+++|.+++..... .....+++..++.++.|++.||+|||+.+ ++|+||||+||++
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceEEE
Confidence 999999999999999999864321 11346899999999999999999999999 9999999999999
Q ss_pred CCCCcEEEeeccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCC
Q 041031 145 DSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNN 223 (313)
Q Consensus 145 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~ 223 (313)
++++.+||+|||++......... .......+++.|+|||++.+..++.++|||||||++|+|++ |..||......
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~--- 300 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYY-KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE--- 300 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTT-CCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH---
T ss_pred cCCCcEEEcccCccccccccccc-ccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH---
Confidence 99999999999999865543221 12223356789999999999999999999999999999999 99999654321
Q ss_pred ccccchhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhccccc
Q 041031 224 QYTEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSKEW 303 (313)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~~ 303 (313)
+....+....... .....+..+.+|+.+||+.||++|||+.++++.|+++.......
T Consensus 301 --------------------~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~ 357 (382)
T 3tt0_A 301 --------------------ELFKLLKEGHRMD---KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQ 357 (382)
T ss_dssp --------------------HHHHHHHTTCCCC---CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSC
T ss_pred --------------------HHHHHHHcCCCCC---CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcC
Confidence 2222222222221 22345567889999999999999999999999999999865444
No 54
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.2e-45 Score=335.56 Aligned_cols=252 Identities=28% Similarity=0.475 Sum_probs=209.9
Q ss_pred HhcCccccceeccCCeEEEEEeEECCcceEEEeccccc-cHHHHHHHHHHHhc-CCCceeeeeEEEeCC-eEEEEEeecC
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTK-SKEFSSELKILCKV-HSNLIELIGYAAGGD-SLFLVYEYAQ 86 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~aiK~~~~~~-~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~-~~~lv~e~~~ 86 (313)
..++|++.+.||+|+||.||+|.+.++.||||.++... .+.+.+|+.+++++ ||||+++++++.... ..++||||++
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~ 270 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 270 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCT
T ss_pred ChHHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecC
Confidence 35789999999999999999999999999999998654 56688999999999 999999999987665 7999999999
Q ss_pred CCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccccCChh
Q 041031 87 NGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPE 166 (313)
Q Consensus 87 ~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 166 (313)
+|+|.+++... ....++...++.++.|++.||+|||+++ ++|+||||+||+++.++.+||+|||++.......
T Consensus 271 ~g~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~- 343 (450)
T 1k9a_A 271 KGSLVDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ- 343 (450)
T ss_dssp TCBHHHHHHHH---CTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC----
T ss_pred CCcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCcccccccc-
Confidence 99999999522 2234789999999999999999999999 9999999999999999999999999987544321
Q ss_pred hhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchhHHHHHHHHhcCcHHH
Q 041031 167 IAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDF 245 (313)
Q Consensus 167 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (313)
....++..|+|||++.+..++.++||||||+++|+|++ |..||...... +.
T Consensus 344 -----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-----------------------~~ 395 (450)
T 1k9a_A 344 -----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----------------------DV 395 (450)
T ss_dssp --------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT-----------------------TH
T ss_pred -----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----------------------HH
Confidence 11246789999999999999999999999999999998 99999765443 11
Q ss_pred HHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhc
Q 041031 246 MAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILIS 299 (313)
Q Consensus 246 ~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 299 (313)
...+...... .....++..+.+|+.+||+.||.+|||+.++++.|+.+...
T Consensus 396 ~~~i~~~~~~---~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 396 VPRVEKGYKM---DAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp HHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHcCCCC---CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 2222221111 12334567899999999999999999999999999998765
No 55
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=2e-45 Score=320.42 Aligned_cols=264 Identities=22% Similarity=0.306 Sum_probs=200.6
Q ss_pred HHhcCccccceeccCCeEEEEEeEEC-CcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEE
Q 041031 9 DATSNFSTSLKIGQGSYGSVYLGKLR-GKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLV 81 (313)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~v~~~~~~-~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv 81 (313)
...++|+++++||+|+||.||+|.+. ++.||+|.+.... ...+.+|+.+++.+ ||||+++++++.+.+..++|
T Consensus 18 ~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 97 (311)
T 3niz_A 18 GLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLV 97 (311)
T ss_dssp CSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEE
T ss_pred chHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEE
Confidence 45689999999999999999999996 8889999987543 24577899999999 99999999999999999999
Q ss_pred EeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccc
Q 041031 82 YEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL 161 (313)
Q Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~ 161 (313)
|||+++ +|.+.+. .....+++..++.++.|++.||+|||+++ ++|+||||+||+++.++.+||+|||++...
T Consensus 98 ~e~~~~-~l~~~~~----~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 169 (311)
T 3niz_A 98 FEFMEK-DLKKVLD----ENKTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAF 169 (311)
T ss_dssp EECCSE-EHHHHHH----TCTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEET
T ss_pred EcCCCC-CHHHHHH----hccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceec
Confidence 999964 7888874 34456899999999999999999999999 999999999999999999999999999865
Q ss_pred cCChhhhhhcccccccccccCCccccC-CCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhc
Q 041031 162 EHSPEIAAAASRIVGTFGYLAPEYVRD-GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240 (313)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (313)
..... ......+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+..... .+.........
T Consensus 170 ~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--------~~~~i~~~~~~ 238 (311)
T 3niz_A 170 GIPVR---SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD--------QLPKIFSILGT 238 (311)
T ss_dssp TSCCC------CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT--------HHHHHHHHHCC
T ss_pred CCCcc---cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH--------HHHHHHHHHCC
Confidence 43221 2223467999999999976 568999999999999999999999997665431 11111110000
Q ss_pred Cc---HHHHHHhhhhcCCCC---CC-----CCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 041031 241 DT---KDFMAKLTECLDPNL---TR-----YHKDSMLQMALLSKDCVDENWKRRPDMSNAAI 291 (313)
Q Consensus 241 ~~---~~~~~~l~~~~~~~~---~~-----~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 291 (313)
.. ......+........ .. .....+..+.+|+.+||+.||.+|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 239 PNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp CCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred CChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00 000000000000000 00 11223457889999999999999999999986
No 56
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.1e-45 Score=319.76 Aligned_cols=264 Identities=17% Similarity=0.208 Sum_probs=211.8
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEecccc-ccHHHHHHHHHHHhc--CCCceeeeeEEEeCCeEEEEEee
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT-KSKEFSSELKILCKV--HSNLIELIGYAAGGDSLFLVYEY 84 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~-~~~~~~~e~~~l~~l--h~~i~~~~~~~~~~~~~~lv~e~ 84 (313)
..++|++.+.||+|+||.||+|.+. ++.||||++... ....+.+|+.+++.+ |+|++++++++.+....++|||+
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 87 (298)
T 1csn_A 8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL 87 (298)
T ss_dssp ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEe
Confidence 4578999999999999999999975 889999988654 355688999999999 99999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCc-----EEEeeccccc
Q 041031 85 AQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFR-----AKIADFGLVK 159 (313)
Q Consensus 85 ~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~-----~~l~dfg~~~ 159 (313)
+ +++|.+++. .....+++..++.++.|++.||+|||+++ ++|+||||+||+++.++. ++|+|||++.
T Consensus 88 ~-~~~L~~~l~----~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~ 159 (298)
T 1csn_A 88 L-GPSLEDLLD----LCGRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159 (298)
T ss_dssp C-CCBHHHHHH----HTTTCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred c-CCCHHHHHH----HhccCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECcccc
Confidence 9 999999995 23456999999999999999999999999 999999999999987765 9999999998
Q ss_pred cccCChhhh----hhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHH
Q 041031 160 LLEHSPEIA----AAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYM 235 (313)
Q Consensus 160 ~~~~~~~~~----~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 235 (313)
......... .......+|+.|+|||++.+..++.++||||||+++|+|++|+.||....... .........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-----~~~~~~~~~ 234 (298)
T 1csn_A 160 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAAT-----NKQKYERIG 234 (298)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCC-----HHHHHHHHH
T ss_pred ccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccc-----cHHHHHHHH
Confidence 765432211 12234568999999999999999999999999999999999999998754421 000000000
Q ss_pred HHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcc
Q 041031 236 LAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISS 300 (313)
Q Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 300 (313)
... ............+..+.+++.+||+.||.+|||+.+|++.|+++....
T Consensus 235 ~~~--------------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~ 285 (298)
T 1csn_A 235 EKK--------------QSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL 285 (298)
T ss_dssp HHH--------------HHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred hhc--------------cCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhc
Confidence 000 000000011233467889999999999999999999999999998753
No 57
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-45 Score=317.21 Aligned_cols=258 Identities=27% Similarity=0.440 Sum_probs=210.9
Q ss_pred hcCccccc-eeccCCeEEEEEeEEC----CcceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEE
Q 041031 11 TSNFSTSL-KIGQGSYGSVYLGKLR----GKNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFL 80 (313)
Q Consensus 11 ~~~y~~~~-~lg~g~~g~v~~~~~~----~~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~l 80 (313)
.++|.+.. .||+|+||.||+|.+. +..||||.+.... .+.+.+|+++++.+ ||||+++++++ ..+..++
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l 86 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML 86 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence 46788877 9999999999999864 6679999997643 34577899999999 99999999999 4556899
Q ss_pred EEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccccc
Q 041031 81 VYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKL 160 (313)
Q Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~ 160 (313)
|||++++++|.+++. .....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..
T Consensus 87 v~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 159 (287)
T 1u59_A 87 VMEMAGGGPLHKFLV----GKREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKA 159 (287)
T ss_dssp EEECCTTEEHHHHHT----TCTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEeCCCCCHHHHHH----hCCccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceee
Confidence 999999999999985 34456899999999999999999999999 99999999999999999999999999987
Q ss_pred ccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchhHHHHHHHHh
Q 041031 161 LEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLVDYMLAVF 239 (313)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (313)
...............+++.|+|||++.+..++.++||||||+++|+|++ |..||......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------------------- 220 (287)
T 1u59_A 160 LGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP------------------- 220 (287)
T ss_dssp CTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH-------------------
T ss_pred eccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH-------------------
Confidence 6543322222233356789999999998889999999999999999998 99999754431
Q ss_pred cCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcccc
Q 041031 240 NDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSKE 302 (313)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~ 302 (313)
+....+.....+ ......+..+.+++.+||+.||.+|||+.++++.|+.+..+...
T Consensus 221 ----~~~~~i~~~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 276 (287)
T 1u59_A 221 ----EVMAFIEQGKRM---ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 276 (287)
T ss_dssp ----HHHHHHHTTCCC---CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred ----HHHHHHhcCCcC---CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 112222221111 22345567899999999999999999999999999999886443
No 58
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1.5e-45 Score=328.93 Aligned_cols=245 Identities=24% Similarity=0.363 Sum_probs=202.0
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEecccc------ccHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT------KSKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLV 81 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~------~~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv 81 (313)
.++|++.+.||+|+||.||+|.+. ++.||+|++... ....+.+|+.+++.+ ||||+++++++.+.+..++|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 578999999999999999999987 678999998643 245678899999999 99999999999999999999
Q ss_pred EeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccc
Q 041031 82 YEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL 161 (313)
Q Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~ 161 (313)
|||+.+|+|.+++. ....+++..++.++.|++.||.|||+++ |+|+||||+||+++.+|.++|+|||++...
T Consensus 94 ~e~~~gg~L~~~l~-----~~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 165 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQ-----QNVHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAML 165 (384)
T ss_dssp ECCCTTEEHHHHHH-----TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EecCCCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeec
Confidence 99999999999994 4567999999999999999999999999 999999999999999999999999999865
Q ss_pred cCChhhhhhcccccccccccCCccccC---CCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHH
Q 041031 162 EHSPEIAAAASRIVGTFGYLAPEYVRD---GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238 (313)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~aPE~~~~---~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (313)
... .......+|+.|+|||++.+ ..++.++|||||||++|+|++|..||....... ..
T Consensus 166 ~~~----~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~---------~~------ 226 (384)
T 4fr4_A 166 PRE----TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS---------SK------ 226 (384)
T ss_dssp CTT----CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC---------HH------
T ss_pred cCC----CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc---------HH------
Confidence 432 22334578999999999974 458999999999999999999999997554321 00
Q ss_pred hcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCC-HHHHHH
Q 041031 239 FNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPD-MSNAAI 291 (313)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps-~~~ll~ 291 (313)
+....+.... .......+..+.+|+.+||+.||.+||+ ++++++
T Consensus 227 -----~~~~~~~~~~----~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 227 -----EIVHTFETTV----VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp -----HHHHHHHHCC----CCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred -----HHHHHHhhcc----cCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 1111111111 1122344567889999999999999998 666653
No 59
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=5.2e-46 Score=328.11 Aligned_cols=263 Identities=27% Similarity=0.443 Sum_probs=210.9
Q ss_pred HHhcCccccceeccCCeEEEEEeEECC-------cceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEeCC
Q 041031 9 DATSNFSTSLKIGQGSYGSVYLGKLRG-------KNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAGGD 76 (313)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~v~~~~~~~-------~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~ 76 (313)
...++|.+.+.||+|+||.||+|++.+ +.||||.++... .+.+.+|+.+++.+ ||||+++++++.+.+
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 345789999999999999999999864 789999997654 34578899999999 999999999999999
Q ss_pred eEEEEEeecCCCChhhhhcCCCCC-------------------CCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEecc
Q 041031 77 SLFLVYEYAQNGALSDHLHWPSVK-------------------GKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDV 137 (313)
Q Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~-------------------~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di 137 (313)
..++||||+++++|.+++...... ....+++..++.++.|++.||.|||+++ ++|+||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dl 200 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDL 200 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCC
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCC
Confidence 999999999999999998543211 1257899999999999999999999999 999999
Q ss_pred CCCCeeeCCCCcEEEeeccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccC
Q 041031 138 KTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSR 216 (313)
Q Consensus 138 ~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~ 216 (313)
||+||+++.++.++|+|||++........ ........+++.|+|||++.+..++.++||||||+++|+|++ |..||..
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 279 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSADY-YKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 279 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGC-BC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred CcceEEECCCCeEEEeecCCCcccccCcc-ccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC
Confidence 99999999999999999999876543211 112223457889999999998899999999999999999999 9999965
Q ss_pred CCCCCCCccccchhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHH
Q 041031 217 DANPGNNQYTEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHI 296 (313)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~ 296 (313)
.... +....+. +..........+..+.+++.+||+.||.+|||+.++++.|+++
T Consensus 280 ~~~~-----------------------~~~~~~~---~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~ 333 (343)
T 1luf_A 280 MAHE-----------------------EVIYYVR---DGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM 333 (343)
T ss_dssp SCHH-----------------------HHHHHHH---TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred CChH-----------------------HHHHHHh---CCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHH
Confidence 4321 1111111 1122222334556799999999999999999999999999998
Q ss_pred Hhccc
Q 041031 297 LISSK 301 (313)
Q Consensus 297 ~~~~~ 301 (313)
.....
T Consensus 334 ~~~~~ 338 (343)
T 1luf_A 334 CERAE 338 (343)
T ss_dssp TC---
T ss_pred Hhhhh
Confidence 76543
No 60
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-45 Score=323.83 Aligned_cols=261 Identities=28% Similarity=0.461 Sum_probs=204.8
Q ss_pred hcCccccceeccCCeEEEEEeEECC------cceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLRG------KNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLF 79 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~~------~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~ 79 (313)
.++|.+.+.||+|+||.||+|.+.. ..||||.+.... ...+.+|+.+++.+ ||||+++++++.+.+..+
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 3567889999999999999998762 249999987643 33477899999999 999999999999999999
Q ss_pred EEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccc
Q 041031 80 LVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVK 159 (313)
Q Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~ 159 (313)
+|||++++++|.+++. .....+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++.
T Consensus 123 lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 195 (333)
T 1mqb_A 123 IITEYMENGALDKFLR----EKDGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSR 195 (333)
T ss_dssp EEEECCTTEEHHHHHH----HTTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred EEEeCCCCCcHHHHHH----hCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcch
Confidence 9999999999999985 33467899999999999999999999999 9999999999999999999999999998
Q ss_pred cccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchhHHHHHHHH
Q 041031 160 LLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLVDYMLAV 238 (313)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (313)
................+++.|+|||++.+..++.++||||||+++|+|++ |..||......
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~------------------ 257 (333)
T 1mqb_A 196 VLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH------------------ 257 (333)
T ss_dssp ---------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------------------
T ss_pred hhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH------------------
Confidence 76543322222223345788999999999999999999999999999999 99999644321
Q ss_pred hcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcccccc
Q 041031 239 FNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSKEWE 304 (313)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~~~ 304 (313)
+....+...... ......+..+.+++.+||+.||.+||++.++++.|+++........
T Consensus 258 -----~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~~~ 315 (333)
T 1mqb_A 258 -----EVMKAINDGFRL---PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLK 315 (333)
T ss_dssp -----HHHHHHHTTCCC---CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGGGG
T ss_pred -----HHHHHHHCCCcC---CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchhhh
Confidence 112222221111 1233455678999999999999999999999999999987655443
No 61
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=8.3e-46 Score=325.55 Aligned_cols=245 Identities=23% Similarity=0.324 Sum_probs=203.0
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEecccc------ccHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEE
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT------KSKEFSSELKILCKV-HSNLIELIGYAAGGDSLFL 80 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~------~~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~l 80 (313)
..++|.+.+.||+|+||.||+|.+. ++.||||++... ....+.+|+.+++.+ ||||+++++++...+..++
T Consensus 7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 4578999999999999999999985 789999998643 245688999999999 9999999999999999999
Q ss_pred EEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccccc
Q 041031 81 VYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKL 160 (313)
Q Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~ 160 (313)
||||+ +|+|.+++. ....+++..++.++.|++.||.|||+.+ ++|+||||+||++++++.+||+|||++..
T Consensus 87 v~E~~-~g~l~~~l~-----~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~ 157 (336)
T 3h4j_B 87 VIEYA-GGELFDYIV-----EKKRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNI 157 (336)
T ss_dssp EECCC-CEEHHHHHH-----HHCSCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBT
T ss_pred EEECC-CCcHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEecccee
Confidence 99999 778988883 3456999999999999999999999999 99999999999999999999999999886
Q ss_pred ccCChhhhhhcccccccccccCCccccCCCC-CCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHh
Q 041031 161 LEHSPEIAAAASRIVGTFGYLAPEYVRDGCV-TTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF 239 (313)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (313)
..... ......+|+.|+|||++.+..+ +.++||||||+++|+|++|..||..........
T Consensus 158 ~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~--------------- 218 (336)
T 3h4j_B 158 MTDGN----FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK--------------- 218 (336)
T ss_dssp TTTSB----TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC---------------
T ss_pred ccCCc----ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH---------------
Confidence 55432 2233468999999999988776 689999999999999999999997654321110
Q ss_pred cCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 041031 240 NDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLS 294 (313)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~ 294 (313)
.+...........+..+.+|+++||..||.+|||+.|+++.-+
T Consensus 219 ------------~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~ 261 (336)
T 3h4j_B 219 ------------KVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPW 261 (336)
T ss_dssp ------------CCCSSCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHH
T ss_pred ------------HHHcCCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChh
Confidence 0011111122334567889999999999999999999987543
No 62
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=5.6e-46 Score=319.19 Aligned_cols=256 Identities=26% Similarity=0.391 Sum_probs=198.2
Q ss_pred HHhcCccccceeccCCeEEEEEeEEC-----CcceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeE
Q 041031 9 DATSNFSTSLKIGQGSYGSVYLGKLR-----GKNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAGGDSL 78 (313)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~v~~~~~~-----~~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~ 78 (313)
...++|++.+.||+|+||.||+|.+. +..+|+|...... .+.+.+|+.+++.+ ||||+++++++. .+..
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 90 (281)
T 1mp8_A 12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 90 (281)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCcc
Confidence 34678999999999999999999885 3458999987543 34577899999999 999999999985 4568
Q ss_pred EEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccc
Q 041031 79 FLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLV 158 (313)
Q Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~ 158 (313)
++||||+++++|.+++. .....+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 163 (281)
T 1mp8_A 91 WIIMELCTLGELRSFLQ----VRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLS 163 (281)
T ss_dssp EEEEECCTTEEHHHHHH----HTTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC----
T ss_pred EEEEecCCCCCHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECccccc
Confidence 99999999999999985 23456899999999999999999999999 999999999999999999999999998
Q ss_pred ccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchhHHHHHHH
Q 041031 159 KLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLVDYMLA 237 (313)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 237 (313)
........ .......+++.|+|||++.+..++.++||||||+++|+|++ |..||......
T Consensus 164 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~----------------- 224 (281)
T 1mp8_A 164 RYMEDSTY--YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN----------------- 224 (281)
T ss_dssp -----------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-----------------
T ss_pred cccCcccc--cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH-----------------
Confidence 86654321 12222346788999999998899999999999999999997 99999754432
Q ss_pred HhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcc
Q 041031 238 VFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISS 300 (313)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 300 (313)
+....+.... ........+..+.+++.+||+.||.+|||+.++++.|+.+..+.
T Consensus 225 ------~~~~~i~~~~---~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 225 ------DVIGRIENGE---RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp ------GHHHHHHTTC---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHcCC---CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 1111121111 11123345667889999999999999999999999999988654
No 63
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.6e-45 Score=325.86 Aligned_cols=249 Identities=25% Similarity=0.372 Sum_probs=191.1
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc-cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEeec
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK-SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYEYA 85 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~-~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e~~ 85 (313)
..++|.+.+.||+|+||.||+|.+. ++.||||++.... .+.+.+|+.+++.+ ||||+++++++.+.+..++||||+
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 130 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELV 130 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeC
Confidence 4567999999999999999999997 6789999997653 45577899999999 999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCC---CCcEEEeecccccccc
Q 041031 86 QNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDS---NFRAKIADFGLVKLLE 162 (313)
Q Consensus 86 ~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~---~~~~~l~dfg~~~~~~ 162 (313)
++++|.+++. ....+++..++.++.|++.||.|||+.+ ++|+||||+||+++. ++.++|+|||++....
T Consensus 131 ~~~~L~~~l~-----~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~ 202 (349)
T 2w4o_A 131 TGGELFDRIV-----EKGYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE 202 (349)
T ss_dssp CSCBHHHHHT-----TCSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC------
T ss_pred CCCCHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCccccccC
Confidence 9999999983 4566899999999999999999999999 999999999999975 8899999999987654
Q ss_pred CChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcCc
Q 041031 163 HSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDT 242 (313)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (313)
... ......+|+.|+|||++.+..++.++|||||||++|+|++|..||...... .
T Consensus 203 ~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--------~------------- 257 (349)
T 2w4o_A 203 HQV----LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD--------Q------------- 257 (349)
T ss_dssp --------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH--------H-------------
T ss_pred ccc----ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc--------H-------------
Confidence 321 122346899999999999999999999999999999999999999654331 0
Q ss_pred HHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 243 KDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
.....+...............+..+.+|+++||+.||++|||+.++++.
T Consensus 258 -~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 258 -FMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp -HHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -HHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0111111111111111233456678999999999999999999999874
No 64
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.8e-46 Score=323.23 Aligned_cols=264 Identities=24% Similarity=0.387 Sum_probs=218.3
Q ss_pred HHHHHHhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc--cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEE
Q 041031 5 NEVRDATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK--SKEFSSELKILCKV-HSNLIELIGYAAGGDSLF 79 (313)
Q Consensus 5 ~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~--~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~ 79 (313)
+..+...++|++.+.||+|+||.||+|.+. +..+|+|.+.... .+.+.+|+.+++.+ ||||+++++++.+.+..+
T Consensus 6 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 85 (288)
T 3kfa_A 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 85 (288)
T ss_dssp CTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEE
T ss_pred hcccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEE
Confidence 344456789999999999999999999998 7889999987654 45688999999999 999999999999999999
Q ss_pred EEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccc
Q 041031 80 LVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVK 159 (313)
Q Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~ 159 (313)
+|||++.+++|.+++... ....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+.
T Consensus 86 ~v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~ 159 (288)
T 3kfa_A 86 IITEFMTYGNLLDYLREC---NRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSR 159 (288)
T ss_dssp EEEECCTTEEHHHHHHHC---CTTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGG
T ss_pred EEEEcCCCCcHHHHHHhc---ccCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccce
Confidence 999999999999998522 3456899999999999999999999999 9999999999999999999999999998
Q ss_pred cccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchhHHHHHHHH
Q 041031 160 LLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLVDYMLAV 238 (313)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (313)
....... .......+++.|+|||++.+..++.++||||||+++|+|++ |..||......
T Consensus 160 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~------------------ 219 (288)
T 3kfa_A 160 LMTGDTY--TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS------------------ 219 (288)
T ss_dssp TSCSSSS--EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG------------------
T ss_pred eccCCcc--ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH------------------
Confidence 7654322 12223456788999999999999999999999999999999 99999754432
Q ss_pred hcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcccc
Q 041031 239 FNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSKE 302 (313)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~ 302 (313)
+....+....... .....+..+.+|+.+||+.||.+|||+.++++.|+.+..+...
T Consensus 220 -----~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~~~ 275 (288)
T 3kfa_A 220 -----QVYELLEKDYRME---RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI 275 (288)
T ss_dssp -----GHHHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHhccCCCC---CCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhccc
Confidence 1122222221111 2234456789999999999999999999999999999886543
No 65
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.7e-45 Score=321.14 Aligned_cols=266 Identities=27% Similarity=0.424 Sum_probs=208.4
Q ss_pred HHHhcCccccceeccCCeEEEEEeEECCcceEEEeccccccHHHHHHHHHHHhc---CCCceeeeeEEEeC----CeEEE
Q 041031 8 RDATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV---HSNLIELIGYAAGG----DSLFL 80 (313)
Q Consensus 8 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~aiK~~~~~~~~~~~~e~~~l~~l---h~~i~~~~~~~~~~----~~~~l 80 (313)
....++|++.+.||+|+||.||+|++.++.||||++..........|.+++... ||||+++++++... ...++
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 112 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYL 112 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEE
T ss_pred cccccceEEEeEeecCCCeEEEEEEECCceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEE
Confidence 345679999999999999999999999999999999877767777777777665 99999999999877 78999
Q ss_pred EEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcC--------CCCceEEeccCCCCeeeCCCCcEEE
Q 041031 81 VYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQY--------TKPYYVHRDVKTSNILLDSNFRAKI 152 (313)
Q Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~--------~~~~i~h~di~p~nil~~~~~~~~l 152 (313)
||||+++++|.+++. ...+++..++.++.|++.||.|||+. + ++|+||||+||+++.++.+||
T Consensus 113 v~e~~~~g~L~~~l~------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dikp~Nill~~~~~~kl 183 (337)
T 3mdy_A 113 ITDYHENGSLYDYLK------STTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA---IAHRDLKSKNILVKKNGTCCI 183 (337)
T ss_dssp EECCCTTCBHHHHHH------HCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCC---EECSCCCGGGEEECTTSCEEE
T ss_pred EEeccCCCcHHHHhh------ccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC---EEecccchHHEEECCCCCEEE
Confidence 999999999999994 23589999999999999999999998 8 999999999999999999999
Q ss_pred eeccccccccCChhhh-hhcccccccccccCCccccCCCCCCc------cchhhHHHHHHHHHhC----------CCCcc
Q 041031 153 ADFGLVKLLEHSPEIA-AAASRIVGTFGYLAPEYVRDGCVTTK------SDVYAFGVVLMELITG----------QQALS 215 (313)
Q Consensus 153 ~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~------~DiwslG~~l~~~~tg----------~~p~~ 215 (313)
+|||++.......... .......+|+.|+|||++.+...+.. +|||||||++|+|++| ..||.
T Consensus 184 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~ 263 (337)
T 3mdy_A 184 ADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYH 263 (337)
T ss_dssp CCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred EeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHh
Confidence 9999997655432211 12223468999999999987766665 9999999999999999 44443
Q ss_pred CCCCCCCCccccchhHHHHHHHHhcCcHHHHHHh-hhhcCCCCCC--CCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 216 RDANPGNNQYTEHRSLVDYMLAVFNDTKDFMAKL-TECLDPNLTR--YHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~--~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
...... .... .....+ .....+.... ....++..+.+++.+||+.||.+|||+.++++.
T Consensus 264 ~~~~~~-------~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 325 (337)
T 3mdy_A 264 DLVPSD-------PSYE-----------DMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT 325 (337)
T ss_dssp TTSCSS-------CCHH-----------HHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred hhcCCC-------Cchh-----------hhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence 322211 0000 001111 1111222221 233677889999999999999999999999999
Q ss_pred HHHHHhcc
Q 041031 293 LSHILISS 300 (313)
Q Consensus 293 l~~~~~~~ 300 (313)
|+++..+.
T Consensus 326 L~~l~~~~ 333 (337)
T 3mdy_A 326 LAKMSESQ 333 (337)
T ss_dssp HHHHHHTT
T ss_pred HHHHHhhc
Confidence 99988764
No 66
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=6.9e-46 Score=328.53 Aligned_cols=251 Identities=21% Similarity=0.264 Sum_probs=201.2
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEecccc--------ccHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT--------KSKEFSSELKILCKV-HSNLIELIGYAAGGDSLF 79 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~--------~~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~ 79 (313)
.++|++.+.||+|+||.||+|.++ ++.||||++... ..+.+.+|+.+++.+ ||||+++++++.+.+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 467999999999999999999987 789999998532 345688999999999 999999999999999999
Q ss_pred EEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCc---EEEeecc
Q 041031 80 LVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFR---AKIADFG 156 (313)
Q Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~---~~l~dfg 156 (313)
+||||+++++|.+.+.... .....+++..++.++.|++.||.|||+++ ++|+||||+||+++.++. +||+|||
T Consensus 103 lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg 178 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRA-DAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFG 178 (351)
T ss_dssp EEEECCSSCBHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred EEEeCCCCCCHHHHHHHhc-ccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCc
Confidence 9999999999988774221 12345899999999999999999999999 999999999999986554 9999999
Q ss_pred ccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHH
Q 041031 157 LVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYML 236 (313)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 236 (313)
++........ ......+|+.|+|||++.+..++.++|||||||++|+|++|..||.+...
T Consensus 179 ~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----------------- 238 (351)
T 3c0i_A 179 VAIQLGESGL---VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE----------------- 238 (351)
T ss_dssp TCEECCTTSC---BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH-----------------
T ss_pred ceeEecCCCe---eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH-----------------
Confidence 9987654321 22334689999999999999999999999999999999999999965321
Q ss_pred HHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 237 AVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
+....+...............+..+.+|+.+||..||.+|||+.++++.
T Consensus 239 -------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 239 -------RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp -------HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -------HHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1111111100000000011234578899999999999999999999863
No 67
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=8.3e-46 Score=329.15 Aligned_cols=250 Identities=21% Similarity=0.288 Sum_probs=194.8
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc--cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEeec
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK--SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYEYA 85 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~--~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e~~ 85 (313)
.++|.+.+.||+|+||.||+|++. ++.||||++.... .+.+.+|+.+++.+ ||||+++++++.+.+..++||||+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 98 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYA 98 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeC
Confidence 478999999999999999999997 7889999987543 56688999999999 999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCc--EEEeeccccccccC
Q 041031 86 QNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFR--AKIADFGLVKLLEH 163 (313)
Q Consensus 86 ~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~--~~l~dfg~~~~~~~ 163 (313)
.+++|.+++. ....+++..++.++.|++.||+|||+++ ++|+||||+||+++.++. +||+|||++.....
T Consensus 99 ~~~~L~~~l~-----~~~~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~ 170 (361)
T 3uc3_A 99 SGGELYERIC-----NAGRFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 170 (361)
T ss_dssp CSCBHHHHHH-----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred CCCCHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence 9999999983 3456999999999999999999999999 999999999999987665 99999999874332
Q ss_pred ChhhhhhcccccccccccCCccccCCCCCCc-cchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcCc
Q 041031 164 SPEIAAAASRIVGTFGYLAPEYVRDGCVTTK-SDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDT 242 (313)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~-~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (313)
. .......+|+.|+|||++.+..++.+ +|||||||++|+|++|+.||.......
T Consensus 171 ~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--------------------- 225 (361)
T 3uc3_A 171 H----SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR--------------------- 225 (361)
T ss_dssp --------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC---------------------
T ss_pred c----CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH---------------------
Confidence 2 12233468999999999988877655 899999999999999999997654421
Q ss_pred HHHHHHhhhhcCCCCCC-CCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 041031 243 KDFMAKLTECLDPNLTR-YHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLS 294 (313)
Q Consensus 243 ~~~~~~l~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~ 294 (313)
.....+.......... .....+..+.+|+.+||..||.+|||+.|+++.-+
T Consensus 226 -~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~ 277 (361)
T 3uc3_A 226 -DYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSW 277 (361)
T ss_dssp -CHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHH
T ss_pred -HHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcc
Confidence 1111111111111111 11234467889999999999999999999997633
No 68
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.1e-45 Score=321.62 Aligned_cols=248 Identities=23% Similarity=0.335 Sum_probs=203.9
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc---------cHHHHHHHHHHHhc-CCCceeeeeEEEeCCe
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK---------SKEFSSELKILCKV-HSNLIELIGYAAGGDS 77 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~---------~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~ 77 (313)
..++|.+.+.||+|+||.||+|.+. ++.+|+|.+.... .+.+.+|+.+++.+ ||||+++++++.+.+.
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 89 (321)
T 2a2a_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD 89 (321)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence 4678999999999999999999987 7889999986532 45688999999999 9999999999999999
Q ss_pred EEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCC----cEEEe
Q 041031 78 LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF----RAKIA 153 (313)
Q Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~----~~~l~ 153 (313)
.++||||+++++|.+++. ....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++ .++|+
T Consensus 90 ~~lv~e~~~~~~L~~~l~-----~~~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~ 161 (321)
T 2a2a_A 90 VVLILELVSGGELFDFLA-----QKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLI 161 (321)
T ss_dssp EEEEECCCCSCBHHHHHH-----TCSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEEC
T ss_pred EEEEEEcCCCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEc
Confidence 999999999999999994 4467899999999999999999999999 99999999999999887 79999
Q ss_pred eccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHH
Q 041031 154 DFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVD 233 (313)
Q Consensus 154 dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~ 233 (313)
|||++....... ......+++.|+|||++.+..++.++||||||+++|+|++|..||.+....
T Consensus 162 Dfg~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------------- 224 (321)
T 2a2a_A 162 DFGLAHEIEDGV----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ------------- 224 (321)
T ss_dssp CCTTCEECCTTC----CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-------------
T ss_pred cCccceecCccc----cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH-------------
Confidence 999998665432 223346899999999999999999999999999999999999999654321
Q ss_pred HHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 234 YMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 234 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
+....+...............+..+.+|+.+||+.||.+|||+.++++.
T Consensus 225 ----------~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 225 ----------ETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp ----------HHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred ----------HHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1111111111000000112234578899999999999999999999863
No 69
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.6e-45 Score=329.89 Aligned_cols=247 Identities=24% Similarity=0.351 Sum_probs=198.6
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc------cHHHHHHHHHHHhc--CCCceeeeeEEEeCCeEEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK------SKEFSSELKILCKV--HSNLIELIGYAAGGDSLFL 80 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~------~~~~~~e~~~l~~l--h~~i~~~~~~~~~~~~~~l 80 (313)
.++|+++++||+|+||.||+|+++ ++.+|+|+++... ...+..|..++.++ ||||+++++++.+.+.+++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 568999999999999999999987 7789999987542 34477899999887 9999999999999999999
Q ss_pred EEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccccc
Q 041031 81 VYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKL 160 (313)
Q Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~ 160 (313)
||||+++|+|.+++. ....+++..++.++.|++.||.|||+++ |+|+||||+||+++.+|.+||+|||++..
T Consensus 131 V~E~~~gg~L~~~l~-----~~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~ 202 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQ-----RQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE 202 (396)
T ss_dssp EEECCTTCBHHHHHH-----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEcCCCCcHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeee
Confidence 999999999999984 3457999999999999999999999999 99999999999999999999999999875
Q ss_pred ccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhc
Q 041031 161 LEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240 (313)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (313)
..... .......+|+.|+|||++.+..++.++|+|||||++|+|++|..||...............
T Consensus 203 ~~~~~---~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~----------- 268 (396)
T 4dc2_A 203 GLRPG---DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED----------- 268 (396)
T ss_dssp CCCTT---CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHH-----------
T ss_pred cccCC---CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHH-----------
Confidence 33221 2334457899999999999999999999999999999999999999654332111000000
Q ss_pred CcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCH
Q 041031 241 DTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDM 286 (313)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 286 (313)
.....+.. .... .....+..+.+|+++||+.||.+||++
T Consensus 269 ---~~~~~i~~-~~~~---~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 269 ---YLFQVILE-KQIR---IPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp ---HHHHHHHH-CCCC---CCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred ---HHHHHHhc-cccC---CCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 01111111 0111 223345678899999999999999996
No 70
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.7e-45 Score=317.52 Aligned_cols=245 Identities=27% Similarity=0.389 Sum_probs=195.9
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc-----------------------------cHHHHHHHHHH
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK-----------------------------SKEFSSELKIL 58 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~-----------------------------~~~~~~e~~~l 58 (313)
..++|++.+.||+|+||.||+|.+. ++.||||++.... .+.+.+|+.++
T Consensus 11 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 90 (298)
T 2zv2_A 11 QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL 90 (298)
T ss_dssp EETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred eecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence 3578999999999999999999986 7889999986542 24578899999
Q ss_pred Hhc-CCCceeeeeEEEe--CCeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEe
Q 041031 59 CKV-HSNLIELIGYAAG--GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHR 135 (313)
Q Consensus 59 ~~l-h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~ 135 (313)
+.+ ||||+++++++.+ ....++||||+++++|.+++ ....+++..++.++.|++.||+|||+++ ++|+
T Consensus 91 ~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~------~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~ 161 (298)
T 2zv2_A 91 KKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP------TLKPLSEDQARFYFQDLIKGIEYLHYQK---IIHR 161 (298)
T ss_dssp HTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS------CSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECC
T ss_pred HhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh------hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecc
Confidence 999 9999999999986 56899999999999998875 2357999999999999999999999999 9999
Q ss_pred ccCCCCeeeCCCCcEEEeeccccccccCChhhhhhcccccccccccCCccccCCC---CCCccchhhHHHHHHHHHhCCC
Q 041031 136 DVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC---VTTKSDVYAFGVVLMELITGQQ 212 (313)
Q Consensus 136 di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~---~~~~~DiwslG~~l~~~~tg~~ 212 (313)
||||+||+++.++.+||+|||++........ ......+|+.|+|||++.+.. ++.++||||||+++|+|++|..
T Consensus 162 Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~ 238 (298)
T 2zv2_A 162 DIKPSNLLVGEDGHIKIADFGVSNEFKGSDA---LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQC 238 (298)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCEECSSSSC---EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSC
T ss_pred CCCHHHEEECCCCCEEEecCCCccccccccc---cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCC
Confidence 9999999999999999999999887654321 222346899999999998755 3778999999999999999999
Q ss_pred CccCCCCCCCCccccchhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 041031 213 ALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAI 291 (313)
Q Consensus 213 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 291 (313)
||...... .....+.... ... ......+..+.+|+.+||+.||++|||+.|+++
T Consensus 239 pf~~~~~~-----------------------~~~~~~~~~~-~~~-~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 239 PFMDERIM-----------------------CLHSKIKSQA-LEF-PDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp SSCCSSHH-----------------------HHHHHHHHCC-CCC-CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCCCccHH-----------------------HHHHHHhccc-CCC-CCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 99643210 1111111110 000 012234567889999999999999999999975
No 71
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=4.7e-46 Score=329.42 Aligned_cols=245 Identities=24% Similarity=0.350 Sum_probs=198.3
Q ss_pred HHhcCccccceeccCCeEEEEEeEEC--CcceEEEecccc------ccHHHHHHHHHHHhc--CCCceeeeeEEEeCCeE
Q 041031 9 DATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT------KSKEFSSELKILCKV--HSNLIELIGYAAGGDSL 78 (313)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~------~~~~~~~e~~~l~~l--h~~i~~~~~~~~~~~~~ 78 (313)
...++|++.+.||+|+||.||+|+++ ++.||||+++.. .......|..+++.+ ||||+++++++.+.+.+
T Consensus 20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 99 (353)
T 3txo_A 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99 (353)
T ss_dssp ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence 34678999999999999999999987 788999998753 244577899999987 99999999999999999
Q ss_pred EEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccc
Q 041031 79 FLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLV 158 (313)
Q Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~ 158 (313)
++||||+++|+|.+++. ....+++..++.++.|++.||.|||+++ |+|+||||+||+++.+|.+||+|||++
T Consensus 100 ~lv~E~~~gg~L~~~l~-----~~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a 171 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQ-----KSRRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMC 171 (353)
T ss_dssp EEEEECCCSCBHHHHHH-----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEeCCCCCcHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccce
Confidence 99999999999999984 3466999999999999999999999999 999999999999999999999999998
Q ss_pred ccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHH
Q 041031 159 KLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238 (313)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (313)
....... .......+|+.|+|||++.+..++.++|||||||++|+|++|..||.+....
T Consensus 172 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~------------------ 230 (353)
T 3txo_A 172 KEGICNG---VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED------------------ 230 (353)
T ss_dssp BCSCC------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH------------------
T ss_pred eecccCC---ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH------------------
Confidence 7543322 2233457899999999999988999999999999999999999999754321
Q ss_pred hcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCH------HHHHH
Q 041031 239 FNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDM------SNAAI 291 (313)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~------~~ll~ 291 (313)
+....+.. ... ......+..+.+|+++||+.||.+||++ .++++
T Consensus 231 -----~~~~~i~~---~~~-~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 231 -----DLFEAILN---DEV-VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp -----HHHHHHHH---CCC-CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred -----HHHHHHHc---CCC-CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 11122211 111 1122345678899999999999999998 66664
No 72
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-45 Score=323.98 Aligned_cols=265 Identities=23% Similarity=0.403 Sum_probs=209.2
Q ss_pred HhcCccccceeccCCeEEEEEeEEC-------CcceEEEecccc----ccHHHHHHHHHHHhc--CCCceeeeeEEEeCC
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR-------GKNAAIKQMKNT----KSKEFSSELKILCKV--HSNLIELIGYAAGGD 76 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~-------~~~~aiK~~~~~----~~~~~~~e~~~l~~l--h~~i~~~~~~~~~~~ 76 (313)
..++|.+.+.||+|+||.||+|.+. +..||||.+... ..+.+.+|+.+++.+ ||||+++++++...+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 4578999999999999999999972 457999998753 245688999999999 999999999999999
Q ss_pred eEEEEEeecCCCChhhhhcCCCCC------------------CCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccC
Q 041031 77 SLFLVYEYAQNGALSDHLHWPSVK------------------GKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVK 138 (313)
Q Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~------------------~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~ 138 (313)
..++||||+++++|.+++...... ....+++..++.++.|++.||.|||+.+ ++|+|||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCC
Confidence 999999999999999999643211 1134789999999999999999999999 9999999
Q ss_pred CCCeeeCCCCcEEEeeccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCC
Q 041031 139 TSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRD 217 (313)
Q Consensus 139 p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~ 217 (313)
|+||+++.++.++|+|||++......... .......+++.|+|||++.+..++.++||||||+++|+|+| |..||...
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 278 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNY-VVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI 278 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTS-EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccc-eeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence 99999999999999999999865433221 12223456789999999999999999999999999999998 99999765
Q ss_pred CCCCCCccccchhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHH
Q 041031 218 ANPGNNQYTEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHIL 297 (313)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~ 297 (313)
.... .+...+....... .....+..+.+|+.+||+.||.+|||+.++++.|+.+.
T Consensus 279 ~~~~----------------------~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 333 (344)
T 1rjb_A 279 PVDA----------------------NFYKLIQNGFKMD---QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQL 333 (344)
T ss_dssp CCSH----------------------HHHHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred CcHH----------------------HHHHHHhcCCCCC---CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 4320 1122222222111 22334567899999999999999999999999999988
Q ss_pred hccccc
Q 041031 298 ISSKEW 303 (313)
Q Consensus 298 ~~~~~~ 303 (313)
...++.
T Consensus 334 ~~~~~~ 339 (344)
T 1rjb_A 334 ADAEEA 339 (344)
T ss_dssp ------
T ss_pred HHHHHH
Confidence 876543
No 73
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-45 Score=322.97 Aligned_cols=273 Identities=20% Similarity=0.275 Sum_probs=208.7
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEeCC--eEEEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAGGD--SLFLV 81 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~--~~~lv 81 (313)
.++|.+.++||+|+||.||+|.+. ++.||||++.... .+.+.+|+++++.+ ||||+++++++...+ ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 467999999999999999999998 8899999987533 45577999999999 999999999998765 78999
Q ss_pred EeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeee----CCCCcEEEeeccc
Q 041031 82 YEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILL----DSNFRAKIADFGL 157 (313)
Q Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~----~~~~~~~l~dfg~ 157 (313)
|||+++++|.+++.... ....+++..++.++.|++.||+|||+++ ++|+||||+||++ +.++.+||+|||+
T Consensus 88 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~ 162 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPS--NAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (319)
T ss_dssp EECCTTCBHHHHHHSGG--GTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTT
T ss_pred EeCCCCCCHHHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCC
Confidence 99999999999996332 2234899999999999999999999999 9999999999999 7778899999999
Q ss_pred cccccCChhhhhhcccccccccccCCcccc--------CCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccch
Q 041031 158 VKLLEHSPEIAAAASRIVGTFGYLAPEYVR--------DGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHR 229 (313)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~--------~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~ 229 (313)
+....... ......+++.|+|||++. +..++.++|||||||++|+|++|..||........ ...
T Consensus 163 a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~----~~~ 234 (319)
T 4euu_A 163 ARELEDDE----QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR----NKE 234 (319)
T ss_dssp CEECCTTC----CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGG----CHH
T ss_pred ceecCCCC----ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccch----hHH
Confidence 98765432 222346899999999986 57789999999999999999999999975543210 001
Q ss_pred hHHHHHHHHhcCcHHHHHHh----hhh--cCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHH
Q 041031 230 SLVDYMLAVFNDTKDFMAKL----TEC--LDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHI 296 (313)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~l----~~~--~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~ 296 (313)
.................... ..+ .-+............+.+++++||+.||++|||+.|+++...+-
T Consensus 235 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 235 VMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp HHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred HHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 11111111000000000000 000 00111124567788899999999999999999999999988744
No 74
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3e-45 Score=319.95 Aligned_cols=240 Identities=25% Similarity=0.395 Sum_probs=202.3
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEecccc------ccHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT------KSKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLV 81 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~------~~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv 81 (313)
.++|++.+.||+|+||.||+|+++ ++.||+|++... ..+.+.+|..+++.+ ||||+++++++.+.+.+++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 578999999999999999999987 889999998653 345577899999999 99999999999999999999
Q ss_pred EeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccc
Q 041031 82 YEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL 161 (313)
Q Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~ 161 (313)
|||+++++|.+++. ....+++..++.++.|++.||.|||+++ ++|+||||+||+++.+|.+||+|||++...
T Consensus 85 ~e~~~gg~L~~~l~-----~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~ 156 (318)
T 1fot_A 85 MDYIEGGELFSLLR-----KSQRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYV 156 (318)
T ss_dssp ECCCCSCBHHHHHH-----HTSSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEEC
T ss_pred EeCCCCCCHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceec
Confidence 99999999999994 3456899999999999999999999999 999999999999999999999999999865
Q ss_pred cCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcC
Q 041031 162 EHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFND 241 (313)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (313)
... .....+|+.|+|||++.+..++.++|+|||||++|+|++|..||......
T Consensus 157 ~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--------------------- 209 (318)
T 1fot_A 157 PDV------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM--------------------- 209 (318)
T ss_dssp SSC------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH---------------------
T ss_pred CCc------cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH---------------------
Confidence 432 22356899999999999999999999999999999999999999654321
Q ss_pred cHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCC-----CHHHHHH
Q 041031 242 TKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRP-----DMSNAAI 291 (313)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-----s~~~ll~ 291 (313)
+....+.. ... ......+..+.+++.+||..||.+|| +++++++
T Consensus 210 --~~~~~i~~---~~~-~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 210 --KTYEKILN---AEL-RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp --HHHHHHHH---CCC-CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred --HHHHHHHh---CCC-CCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 11111111 111 11223456788999999999999999 8888874
No 75
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.2e-45 Score=319.74 Aligned_cols=262 Identities=21% Similarity=0.282 Sum_probs=199.0
Q ss_pred HHhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc------cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEE
Q 041031 9 DATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK------SKEFSSELKILCKV-HSNLIELIGYAAGGDSLF 79 (313)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~------~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~ 79 (313)
...++|++.+.||+|+||.||+|.+. ++.||+|++.... .+.+.+|+.+++.+ ||||+++++++.+.+..+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 2h34_A 31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY 110 (309)
T ss_dssp ---CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred cEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEE
Confidence 45688999999999999999999987 7889999987542 24577899999999 999999999999999999
Q ss_pred EEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccc
Q 041031 80 LVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVK 159 (313)
Q Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~ 159 (313)
++||++++++|.+++. ....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.
T Consensus 111 lv~e~~~~~~L~~~l~-----~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~ 182 (309)
T 2h34_A 111 VDMRLINGVDLAAMLR-----RQGPLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIAS 182 (309)
T ss_dssp EEEECCCCEEHHHHHH-----HHCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC--
T ss_pred EEEEecCCCCHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCc
Confidence 9999999999999984 3356899999999999999999999999 9999999999999999999999999987
Q ss_pred cccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHh
Q 041031 160 LLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF 239 (313)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (313)
....... .......+++.|+|||++.+..++.++||||||+++|+|++|..||......
T Consensus 183 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------------------- 241 (309)
T 2h34_A 183 ATTDEKL--TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS------------------- 241 (309)
T ss_dssp ----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH-------------------
T ss_pred ccccccc--ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH-------------------
Confidence 6543221 1222346889999999999999999999999999999999999999643210
Q ss_pred cCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCC-CHHHHHHHHHHHHhcccccc
Q 041031 240 NDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRP-DMSNAAIRLSHILISSKEWE 304 (313)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-s~~~ll~~l~~~~~~~~~~~ 304 (313)
.....+.. ..+.........+..+.+++.+||+.||.+|| |++++++.|+..........
T Consensus 242 ----~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~~~ 302 (309)
T 2h34_A 242 ----VMGAHINQ-AIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATADQDR 302 (309)
T ss_dssp ----HHHHHHHS-CCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC------
T ss_pred ----HHHHHhcc-CCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhcccc
Confidence 00111111 01111112334455788999999999999999 99999999998877654443
No 76
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.6e-45 Score=318.18 Aligned_cols=254 Identities=26% Similarity=0.438 Sum_probs=201.1
Q ss_pred hcCccccceeccCCeEEEEEeEECCcceEEEeccccc-cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEeecCCC
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTK-SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYEYAQNG 88 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~aiK~~~~~~-~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e~~~~~ 88 (313)
.++|++.+.||+|+||.||+|.+.++.||||.+.... .+.+.+|+++++.+ ||||+++++++.+ ..++||||++++
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~~~ 84 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGG 84 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEETTEEEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCTTC
T ss_pred HhHeeeeeEeecCCCceEEEEEECCeeEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCCCC
Confidence 4689999999999999999999999999999997654 45678999999999 9999999998874 478999999999
Q ss_pred ChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhc---CCCCceEEeccCCCCeeeCCCCc-EEEeeccccccccCC
Q 041031 89 ALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ---YTKPYYVHRDVKTSNILLDSNFR-AKIADFGLVKLLEHS 164 (313)
Q Consensus 89 ~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~---~~~~~i~h~di~p~nil~~~~~~-~~l~dfg~~~~~~~~ 164 (313)
+|.+++.... ....++...++.++.|++.||+|||+ ++ ++|+||||+||+++.++. +||+|||++......
T Consensus 85 ~L~~~l~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~---ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~ 159 (307)
T 2eva_A 85 SLYNVLHGAE--PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA---LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159 (307)
T ss_dssp BHHHHHHCSS--SEECCCHHHHHHHHHHHHHHHHHHHTCSSSC---CCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred CHHHHHhccC--CCCccCHHHHHHHHHHHHHHHHHHHhCCCCC---eecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence 9999995321 12347888999999999999999999 77 999999999999998886 799999998754432
Q ss_pred hhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcCcHH
Q 041031 165 PEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKD 244 (313)
Q Consensus 165 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (313)
.....+++.|+|||++.+..++.++||||||+++|+|++|+.||....... . .
T Consensus 160 ------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----------~-----------~ 212 (307)
T 2eva_A 160 ------MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA----------F-----------R 212 (307)
T ss_dssp -----------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH----------H-----------H
T ss_pred ------cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH----------H-----------H
Confidence 122358999999999999999999999999999999999999997543310 0 0
Q ss_pred HHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhccc
Q 041031 245 FMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSK 301 (313)
Q Consensus 245 ~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~ 301 (313)
....... ..........+..+.+++.+||+.||.+|||+.++++.|+.+....+
T Consensus 213 ~~~~~~~---~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 266 (307)
T 2eva_A 213 IMWAVHN---GTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFP 266 (307)
T ss_dssp HHHHHHT---TCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred HHHHHhc---CCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence 0111111 11111233445678899999999999999999999999999886543
No 77
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-45 Score=328.64 Aligned_cols=260 Identities=23% Similarity=0.359 Sum_probs=208.5
Q ss_pred hcCccccceeccCCeEEEEEeEEC-------CcceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR-------GKNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAGGDSL 78 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~-------~~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~ 78 (313)
.++|.+.+.||+|+||.||+|.+. +..||||.++... ...+.+|+.+++.+ ||||+++++++.+....
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 467999999999999999999954 4579999986542 33577899999999 99999999999999999
Q ss_pred EEEEeecCCCChhhhhcCCCC--CCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCC---cEEEe
Q 041031 79 FLVYEYAQNGALSDHLHWPSV--KGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF---RAKIA 153 (313)
Q Consensus 79 ~lv~e~~~~~~L~~~l~~~~~--~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~---~~~l~ 153 (313)
++||||+.+|+|.+++..... .....+++..++.++.|++.||+|||+++ ++|+||||+||+++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEEC
Confidence 999999999999999853321 22346899999999999999999999999 99999999999999554 59999
Q ss_pred eccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchhHH
Q 041031 154 DFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLV 232 (313)
Q Consensus 154 dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~~ 232 (313)
|||++........ ........+|+.|+|||++.+..++.++|||||||++|+|++ |..||......
T Consensus 227 DFG~a~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~------------ 293 (367)
T 3l9p_A 227 DFGMARDIYRAGY-YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ------------ 293 (367)
T ss_dssp CCHHHHHHHHHSS-CTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------------
T ss_pred CCccccccccccc-cccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH------------
Confidence 9999875432111 112223457889999999999999999999999999999998 99999754321
Q ss_pred HHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcc
Q 041031 233 DYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISS 300 (313)
Q Consensus 233 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 300 (313)
+....+...... ......+..+.+|+.+||+.||.+|||+.+|++.|+.+..+.
T Consensus 294 -----------~~~~~i~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 294 -----------EVLEFVTSGGRM---DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp -----------HHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred -----------HHHHHHHcCCCC---CCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 222222221111 123345567889999999999999999999999999887653
No 78
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.3e-45 Score=324.05 Aligned_cols=261 Identities=20% Similarity=0.257 Sum_probs=208.8
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEecccc-ccHHHHHHHHHHHhc--CCCceeeeeEEEeCCeEEEEEeec
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT-KSKEFSSELKILCKV--HSNLIELIGYAAGGDSLFLVYEYA 85 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~-~~~~~~~e~~~l~~l--h~~i~~~~~~~~~~~~~~lv~e~~ 85 (313)
.++|++.+.||+|+||.||+|.+. ++.||||++... ....+.+|+.+++.+ ||||+++++++.+.+..++|||++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL 87 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC
Confidence 478999999999999999999975 889999998754 345688999999999 999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCc-----EEEeecccccc
Q 041031 86 QNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFR-----AKIADFGLVKL 160 (313)
Q Consensus 86 ~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~-----~~l~dfg~~~~ 160 (313)
+++|.+++.. ....+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++. ++|+|||++..
T Consensus 88 -~~~L~~~~~~----~~~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~ 159 (330)
T 2izr_A 88 -GPSLEDLFDL----CDRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE 159 (330)
T ss_dssp -CCBHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEE
T ss_pred -CCCHHHHHHH----cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEccccee
Confidence 9999999852 2467999999999999999999999999 999999999999998887 99999999987
Q ss_pred ccCChhhhh----hcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHH
Q 041031 161 LEHSPEIAA----AASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYML 236 (313)
Q Consensus 161 ~~~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 236 (313)
......... ......+|+.|+|||++.+..++.++||||||+++|+|++|..||.+..... ......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~---------~~~~~~ 230 (330)
T 2izr_A 160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADT---------LKERYQ 230 (330)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSS---------HHHHHH
T ss_pred eecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccccc---------HHHHHH
Confidence 554322110 1234578999999999999999999999999999999999999998754321 111111
Q ss_pred HHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhc
Q 041031 237 AVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILIS 299 (313)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 299 (313)
..... . ....... .....+ .+.+++..||+.||.+||++.+|.+.|+.+...
T Consensus 231 ~i~~~--~-~~~~~~~-------~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~ 282 (330)
T 2izr_A 231 KIGDT--K-RATPIEV-------LCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 282 (330)
T ss_dssp HHHHH--H-HHSCHHH-------HTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHHhh--h-ccCCHHH-------HhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence 10000 0 0000000 011123 788999999999999999999999999988764
No 79
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=8.5e-46 Score=324.60 Aligned_cols=251 Identities=22% Similarity=0.303 Sum_probs=185.1
Q ss_pred cCcccc---ceeccCCeEEEEEeEEC--CcceEEEeccccccHHHHHHHHHHHhc--CCCceeeeeEEEeCCeEEEEEee
Q 041031 12 SNFSTS---LKIGQGSYGSVYLGKLR--GKNAAIKQMKNTKSKEFSSELKILCKV--HSNLIELIGYAAGGDSLFLVYEY 84 (313)
Q Consensus 12 ~~y~~~---~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~~~~~~~e~~~l~~l--h~~i~~~~~~~~~~~~~~lv~e~ 84 (313)
++|.+. +.||+|+||.||+|.+. ++.||||++.........+|+.+++.+ ||||+++++++.+....++||||
T Consensus 8 ~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~ 87 (325)
T 3kn6_A 8 QHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMEL 87 (325)
T ss_dssp HHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChhhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEc
Confidence 445554 78999999999999997 788999999888778889999999999 99999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCC---cEEEeeccccccc
Q 041031 85 AQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF---RAKIADFGLVKLL 161 (313)
Q Consensus 85 ~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~---~~~l~dfg~~~~~ 161 (313)
+++++|.+++. ....+++..++.++.|++.||+|||+++ ++|+||||+||+++.++ .++|+|||++...
T Consensus 88 ~~~~~L~~~l~-----~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~ 159 (325)
T 3kn6_A 88 LNGGELFERIK-----KKKHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLK 159 (325)
T ss_dssp CCSCBHHHHHH-----HCSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEEC
T ss_pred cCCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccceec
Confidence 99999999984 3467999999999999999999999999 99999999999997665 7999999999865
Q ss_pred cCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcC
Q 041031 162 EHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFND 241 (313)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (313)
..... ......+|+.|+|||++.+..++.++||||||+++|+|++|..||........ .....
T Consensus 160 ~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-----~~~~~--------- 222 (325)
T 3kn6_A 160 PPDNQ---PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT-----CTSAV--------- 222 (325)
T ss_dssp CC-------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC------------CCCHH---------
T ss_pred CCCCC---cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccc-----cccHH---------
Confidence 43322 22234579999999999999999999999999999999999999976543210 00011
Q ss_pred cHHHHHHhhhhcCCCCCC---CCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 242 TKDFMAKLTECLDPNLTR---YHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~---~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
+....+ ....... .....+..+.+|+.+||..||.+|||+.++++.
T Consensus 223 --~~~~~i---~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 223 --EIMKKI---KKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp --HHHHHH---TTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred --HHHHHH---HcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 111111 1111111 112345678999999999999999999998854
No 80
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.2e-45 Score=318.72 Aligned_cols=259 Identities=24% Similarity=0.377 Sum_probs=208.1
Q ss_pred HhcCccccc-eeccCCeEEEEEeEEC----CcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeE
Q 041031 10 ATSNFSTSL-KIGQGSYGSVYLGKLR----GKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAGGDSL 78 (313)
Q Consensus 10 ~~~~y~~~~-~lg~g~~g~v~~~~~~----~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~ 78 (313)
..++|.+.+ .||+|+||.||+|.+. ++.+|||++.... .+.+.+|+.+++.+ ||||+++++++ ..+..
T Consensus 14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~ 92 (291)
T 1xbb_A 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW 92 (291)
T ss_dssp CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence 456788888 9999999999999653 5779999987543 44578899999999 99999999999 56678
Q ss_pred EEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccc
Q 041031 79 FLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLV 158 (313)
Q Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~ 158 (313)
++|||++++++|.+++. ....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++
T Consensus 93 ~lv~e~~~~~~L~~~l~-----~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~ 164 (291)
T 1xbb_A 93 MLVMEMAELGPLNKYLQ-----QNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLS 164 (291)
T ss_dssp EEEEECCTTEEHHHHHH-----HCTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred EEEEEeCCCCCHHHHHH-----hCcCCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCcc
Confidence 99999999999999994 3456899999999999999999999999 999999999999999999999999998
Q ss_pred ccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchhHHHHHHH
Q 041031 159 KLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLVDYMLA 237 (313)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 237 (313)
.................+++.|+|||++.+..++.++||||||+++|+|++ |..||......
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~----------------- 227 (291)
T 1xbb_A 165 KALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS----------------- 227 (291)
T ss_dssp EECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----------------
T ss_pred eeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH-----------------
Confidence 876543322222222345688999999998889999999999999999999 99999754321
Q ss_pred HhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhccccc
Q 041031 238 VFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSKEW 303 (313)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~~ 303 (313)
+....+...... ......+..+.+++.+||+.||.+|||+.++++.|+.+.......
T Consensus 228 ------~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~ 284 (291)
T 1xbb_A 228 ------EVTAMLEKGERM---GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNE 284 (291)
T ss_dssp ------HHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHcCCCC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhhc
Confidence 112222221111 123345678999999999999999999999999999998865443
No 81
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=2e-45 Score=320.45 Aligned_cols=260 Identities=25% Similarity=0.390 Sum_probs=210.9
Q ss_pred HhcCccccceeccCCeEEEEEeEEC-------CcceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCe
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR-------GKNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAGGDS 77 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~-------~~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~ 77 (313)
..++|.+.+.||+|+||.||+|.+. +..||||.+.... .+.+.+|+.+++.+ ||||+++++++.+.+.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 3578999999999999999999873 3679999997643 34577899999999 9999999999999999
Q ss_pred EEEEEeecCCCChhhhhcCCCCC-------------------CCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccC
Q 041031 78 LFLVYEYAQNGALSDHLHWPSVK-------------------GKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVK 138 (313)
Q Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~-------------------~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~ 138 (313)
.++||||+++++|.+++...... ....+++..++.++.|++.||.|||+++ ++|+|||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---Ccccccc
Confidence 99999999999999999643211 1234899999999999999999999999 9999999
Q ss_pred CCCeeeCCCCcEEEeeccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCC
Q 041031 139 TSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRD 217 (313)
Q Consensus 139 p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~ 217 (313)
|+||++++++.++|+|||++......... .......+++.|+|||++.+..++.++||||||+++|+|++ |..||...
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 256 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSY-VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCE-ECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred hheEEEcCCCCEEEccccccccccccccc-eeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999998765433221 12223356788999999999889999999999999999999 99999754
Q ss_pred CCCCCCccccchhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHH
Q 041031 218 ANPGNNQYTEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHIL 297 (313)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~ 297 (313)
... +....+...... ......+..+.+++.+||+.||.+|||+.++++.|+++.
T Consensus 257 ~~~-----------------------~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 310 (314)
T 2ivs_A 257 PPE-----------------------RLFNLLKTGHRM---ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310 (314)
T ss_dssp CGG-----------------------GHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CHH-----------------------HHHHHhhcCCcC---CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 431 112222221111 123345567899999999999999999999999999887
Q ss_pred hc
Q 041031 298 IS 299 (313)
Q Consensus 298 ~~ 299 (313)
..
T Consensus 311 ~~ 312 (314)
T 2ivs_A 311 VK 312 (314)
T ss_dssp HT
T ss_pred hh
Confidence 53
No 82
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.1e-45 Score=334.99 Aligned_cols=257 Identities=23% Similarity=0.316 Sum_probs=207.1
Q ss_pred hHHHHHHhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc------cHHHHHHHHHHHhc-CCCceeeeeEEEe
Q 041031 4 YNEVRDATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK------SKEFSSELKILCKV-HSNLIELIGYAAG 74 (313)
Q Consensus 4 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~------~~~~~~e~~~l~~l-h~~i~~~~~~~~~ 74 (313)
+..++...++|++.++||+|+||.||+|+++ ++.||+|++.... ...+.+|..++..+ ||||+++++++.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 3445556789999999999999999999988 6789999986532 33478899999999 9999999999999
Q ss_pred CCeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEee
Q 041031 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIAD 154 (313)
Q Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~d 154 (313)
.+.+++||||+++|+|.+++. .....+++..++.++.|++.||.|||+++ |+|+||||+||+++.++.+||+|
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~----~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~D 218 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLS----KFEDRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLAD 218 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHH----TTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECC
T ss_pred CCEEEEEEecCCCCcHHHHHH----HccCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcc
Confidence 999999999999999999995 22467999999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCChhhhhhcccccccccccCCcccc-----CCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccch
Q 041031 155 FGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVR-----DGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHR 229 (313)
Q Consensus 155 fg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~-----~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~ 229 (313)
||++........ .......||+.|+|||++. ...++.++|||||||++|+|++|..||.+....
T Consensus 219 FGla~~~~~~~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~--------- 287 (437)
T 4aw2_A 219 FGSCLKLMEDGT--VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV--------- 287 (437)
T ss_dssp CTTCEECCTTSC--EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH---------
T ss_pred hhhhhhcccCCC--cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh---------
Confidence 999876543322 2223357899999999997 567899999999999999999999999754321
Q ss_pred hHHHHHHHHhcCcHHHHHHhh-hhcCCCCCCCCHHHHHHHHHHHhhccccCcCC--CCCHHHHHHH
Q 041031 230 SLVDYMLAVFNDTKDFMAKLT-ECLDPNLTRYHKDSMLQMALLSKDCVDENWKR--RPDMSNAAIR 292 (313)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~--Rps~~~ll~~ 292 (313)
+....+. ..............+..+.+||++||..+|.. ||+++|+++.
T Consensus 288 --------------~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 288 --------------ETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp --------------HHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred --------------HHHHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 1111111 11011111112234567889999999998888 9999999864
No 83
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=4.4e-45 Score=315.31 Aligned_cols=262 Identities=22% Similarity=0.286 Sum_probs=198.0
Q ss_pred cCccccceeccCCeEEEEEeEEC--CcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEe
Q 041031 12 SNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYE 83 (313)
Q Consensus 12 ~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e 83 (313)
++|++.++||+|+||.||+|.+. ++.||+|.+.... ...+.+|+.+++.+ ||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 68999999999999999999997 7889999986443 24577899999999 9999999999999999999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccccC
Q 041031 84 YAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEH 163 (313)
Q Consensus 84 ~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~~ 163 (313)
|+++ ++.+.+. .....+++..++.++.|++.||+|||+++ ++|+||||+||+++.++.++|+|||++.....
T Consensus 82 ~~~~-~l~~~~~----~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 153 (292)
T 3o0g_A 82 FCDQ-DLKKYFD----SCNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGI 153 (292)
T ss_dssp CCSE-EHHHHHH----HTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred cCCC-CHHHHHH----hCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence 9975 5555553 33467999999999999999999999999 99999999999999999999999999986543
Q ss_pred ChhhhhhcccccccccccCCccccCCC-CCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcCc
Q 041031 164 SPEIAAAASRIVGTFGYLAPEYVRDGC-VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDT 242 (313)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (313)
.. .......+|+.|+|||++.+.. ++.++|||||||++|+|++|..||...... ...+...........
T Consensus 154 ~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~-------~~~~~~i~~~~~~~~ 223 (292)
T 3o0g_A 154 PV---RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV-------DDQLKRIFRLLGTPT 223 (292)
T ss_dssp CC---SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSH-------HHHHHHHHHHHCCCC
T ss_pred cc---ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCH-------HHHHHHHHHHhCCCC
Confidence 21 1223346799999999998765 799999999999999999988886433221 011111111100000
Q ss_pred HHHHHHhhhhc----------CCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 041031 243 KDFMAKLTECL----------DPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAI 291 (313)
Q Consensus 243 ~~~~~~l~~~~----------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 291 (313)
.+......... ...+.......+..+.+|+.+||+.||++|||+.|+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 224 EEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00000000000 00011122345567889999999999999999999986
No 84
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=4.7e-45 Score=317.75 Aligned_cols=266 Identities=24% Similarity=0.373 Sum_probs=201.3
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc------cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEE
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK------SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFL 80 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~------~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~l 80 (313)
..++|++.+.||+|+||.||+|.+. ++.||||.+.... ...+.+|+.+++.+ ||||+++++++...+..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 4578999999999999999999986 8899999987422 34577899999999 9999999999999999999
Q ss_pred EEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccccc
Q 041031 81 VYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKL 160 (313)
Q Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~ 160 (313)
|||++.+++|.+++.... .....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..
T Consensus 110 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~ 185 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFK-KQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRF 185 (310)
T ss_dssp EEECCCSCBHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC-----
T ss_pred EEecCCCCCHHHHHHHhc-ccccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceee
Confidence 999999999999884221 13456899999999999999999999999 99999999999999999999999999876
Q ss_pred ccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhc
Q 041031 161 LEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240 (313)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (313)
...... ......+++.|+|||++.+..++.++||||||+++|+|++|..||.+.... ..
T Consensus 186 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----------~~-------- 244 (310)
T 2wqm_A 186 FSSKTT---AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----------LY-------- 244 (310)
T ss_dssp ----------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC----------HH--------
T ss_pred ecCCCc---cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh----------HH--------
Confidence 543221 222346789999999999999999999999999999999999999654321 00
Q ss_pred CcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhccccccc
Q 041031 241 DTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSKEWEK 305 (313)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~~~~ 305 (313)
+....+.....+.. .....+..+.+++.+||+.||.+|||+.++++.|+++.+...+-.+
T Consensus 245 ---~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~~~ 304 (310)
T 2wqm_A 245 ---SLCKKIEQCDYPPL--PSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSLE 304 (310)
T ss_dssp ---HHHHHHHTTCSCCC--CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC----
T ss_pred ---HHHHHhhcccCCCC--cccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhhhh
Confidence 11111111111111 1234456789999999999999999999999999999987655433
No 85
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.2e-44 Score=311.80 Aligned_cols=249 Identities=30% Similarity=0.522 Sum_probs=201.7
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc----------cHHHHHHHHHHHhc-CCCceeeeeEEEeCCe
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK----------SKEFSSELKILCKV-HSNLIELIGYAAGGDS 77 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~----------~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~ 77 (313)
.++|++.+.||+|+||.||+|.+. ++.||+|.+.... .+.+.+|+.+++.+ ||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 478999999999999999999986 8889999986432 15678999999999 999999999987665
Q ss_pred EEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCc-----EEE
Q 041031 78 LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFR-----AKI 152 (313)
Q Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~-----~~l 152 (313)
++||||+++++|.+.+. .....+++..++.++.|++.||+|||+.+. +++|+||||+||+++.++. ++|
T Consensus 97 -~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~-~ivH~dikp~Nil~~~~~~~~~~~~kl 170 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLL----DKAHPIKWSVKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKV 170 (287)
T ss_dssp -EEEEECCTTCBHHHHHH----CTTSCCCHHHHHHHHHHHHHHHHHHHTSSS-CCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred -eEEEEecCCCCHHHHHh----cccCCccHHHHHHHHHHHHHHHHHHHhCCC-CeecCCCCcceEEEeccCCCCceeEEe
Confidence 69999999999998885 344679999999999999999999999863 3899999999999988776 999
Q ss_pred eeccccccccCChhhhhhcccccccccccCCcccc--CCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchh
Q 041031 153 ADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVR--DGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRS 230 (313)
Q Consensus 153 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~ 230 (313)
+|||++...... .....+++.|+|||++. ...++.++||||||+++|+|++|..||.......
T Consensus 171 ~Dfg~~~~~~~~------~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--------- 235 (287)
T 4f0f_A 171 ADFGLSQQSVHS------VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK--------- 235 (287)
T ss_dssp CCCTTCBCCSSC------EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH---------
T ss_pred CCCCcccccccc------ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH---------
Confidence 999998754432 22346899999999994 4567899999999999999999999997654320
Q ss_pred HHHHHHHHhcCcHHHHHHhh-hhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHH
Q 041031 231 LVDYMLAVFNDTKDFMAKLT-ECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHI 296 (313)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~ 296 (313)
. .....+. ....+ ......+..+.+++.+||+.||.+|||+.++++.|+++
T Consensus 236 ~------------~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 236 I------------KFINMIREEGLRP---TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp H------------HHHHHHHHSCCCC---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred H------------HHHHHHhccCCCC---CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 0 0011111 11111 12345567899999999999999999999999999864
No 86
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=5.8e-45 Score=313.11 Aligned_cols=249 Identities=22% Similarity=0.324 Sum_probs=204.0
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEE
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLV 81 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv 81 (313)
..++|++.+.||+|+||.||+|.+. ++.+|+|++.... ...+.+|+.+++.+ ||||+++++++.+.+..+++
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 3578999999999999999999987 7889999986543 34577899999999 99999999999999999999
Q ss_pred EeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCc---EEEeecccc
Q 041031 82 YEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFR---AKIADFGLV 158 (313)
Q Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~---~~l~dfg~~ 158 (313)
||++.+++|.+.+. ....+++..++.++.|++.||.|||+++ ++|+||+|+||+++.++. ++|+|||.+
T Consensus 84 ~e~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~ 155 (284)
T 3kk8_A 84 FDLVTGGELFEDIV-----AREFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA 155 (284)
T ss_dssp ECCCCSCBHHHHHH-----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EecCCCCCHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceee
Confidence 99999999998884 3456899999999999999999999999 999999999999986554 999999998
Q ss_pred ccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHH
Q 041031 159 KLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238 (313)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (313)
....... ......+++.|+|||++.+..++.++||||||+++|+|++|..||......
T Consensus 156 ~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~------------------ 213 (284)
T 3kk8_A 156 IEVNDSE----AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH------------------ 213 (284)
T ss_dssp EECCSSC----BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------------------
T ss_pred EEcccCc----cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh------------------
Confidence 7655432 122346899999999999999999999999999999999999999654321
Q ss_pred hcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHH
Q 041031 239 FNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRL 293 (313)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l 293 (313)
+....+...............+..+.+|+.+||+.||.+|||+.|+++.-
T Consensus 214 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~ 263 (284)
T 3kk8_A 214 -----RLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVP 263 (284)
T ss_dssp -----HHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSH
T ss_pred -----HHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCc
Confidence 11112211111111112234456788999999999999999999999853
No 87
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.6e-45 Score=322.42 Aligned_cols=261 Identities=25% Similarity=0.381 Sum_probs=196.2
Q ss_pred HHhcCccccceeccCCeEEEEEeEECC--c---ceEEEecccc-----ccHHHHHHHHHHHhc-CCCceeeeeEEEeCCe
Q 041031 9 DATSNFSTSLKIGQGSYGSVYLGKLRG--K---NAAIKQMKNT-----KSKEFSSELKILCKV-HSNLIELIGYAAGGDS 77 (313)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~v~~~~~~~--~---~~aiK~~~~~-----~~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~ 77 (313)
...++|++.+.||+|+||.||+|.+.. . .||||.+... ..+.+.+|+.+++.+ ||||+++++++.....
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 345789999999999999999998872 2 6999998754 245678999999999 9999999999987765
Q ss_pred E------EEEEeecCCCChhhhhcCCCC-CCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcE
Q 041031 78 L------FLVYEYAQNGALSDHLHWPSV-KGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRA 150 (313)
Q Consensus 78 ~------~lv~e~~~~~~L~~~l~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~ 150 (313)
. +++|||+.+++|.+++..... .....+++..++.++.|++.||+|||+++ ++|+||||+||++++++.+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCE
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCCCCE
Confidence 5 999999999999999843221 12236899999999999999999999999 9999999999999999999
Q ss_pred EEeeccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccch
Q 041031 151 KIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHR 229 (313)
Q Consensus 151 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~ 229 (313)
+|+|||++......... .......+++.|+|||++.+..++.++|||||||++|+|++ |..||......
T Consensus 177 kl~Dfg~a~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--------- 246 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYY-RQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA--------- 246 (323)
T ss_dssp EECCCCC------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG---------
T ss_pred EEeeccccccccccccc-cccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH---------
Confidence 99999999865443221 12223356788999999999999999999999999999999 89999765432
Q ss_pred hHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhc
Q 041031 230 SLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILIS 299 (313)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 299 (313)
+....+.... ........+..+.+|+.+||+.||.+|||+.++++.|++++..
T Consensus 247 --------------~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~ 299 (323)
T 3qup_A 247 --------------EIYNYLIGGN---RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH 299 (323)
T ss_dssp --------------GHHHHHHTTC---CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred --------------HHHHHHhcCC---CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 1122221111 1112334556789999999999999999999999999999874
No 88
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.4e-45 Score=323.43 Aligned_cols=275 Identities=27% Similarity=0.394 Sum_probs=209.9
Q ss_pred hcCccccceeccCCeEEEEEeEE------CCcceEEEecccccc---HHHHHHHHHHHhc-CCCceeeeeEEE--eCCeE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKL------RGKNAAIKQMKNTKS---KEFSSELKILCKV-HSNLIELIGYAA--GGDSL 78 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~------~~~~~aiK~~~~~~~---~~~~~e~~~l~~l-h~~i~~~~~~~~--~~~~~ 78 (313)
.++|++.+.||+|+||.||+|++ .++.||||.+..... +.+.+|+++++.+ ||||+++++++. +.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 47899999999999999999984 277899999976543 3478999999999 999999999886 55678
Q ss_pred EEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccc
Q 041031 79 FLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLV 158 (313)
Q Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~ 158 (313)
++||||+++++|.+++. .....+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||++
T Consensus 102 ~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 174 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQ----RHRARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLA 174 (327)
T ss_dssp EEEEECCTTCBHHHHHH----HHGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGC
T ss_pred EEEEeecCCCCHHHHHH----hcccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccc
Confidence 99999999999999985 22346899999999999999999999999 999999999999999999999999999
Q ss_pred ccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHH
Q 041031 159 KLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238 (313)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (313)
.................+++.|+|||++.+..++.++||||||+++|+|++|..||...... .....
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~-------------~~~~~ 241 (327)
T 3lxl_A 175 KLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE-------------FLRMM 241 (327)
T ss_dssp EECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH-------------HHHHC
T ss_pred eecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccch-------------hhhhc
Confidence 87654433222333346788899999999999999999999999999999999998643221 00000
Q ss_pred -h-cCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhccccccc
Q 041031 239 -F-NDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSKEWEK 305 (313)
Q Consensus 239 -~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~~~~ 305 (313)
. .........................+..+.+|+.+||+.||.+|||+.++++.|+.+......+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~ 310 (327)
T 3lxl_A 242 GCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCET 310 (327)
T ss_dssp C----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---------
T ss_pred ccccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCccc
Confidence 0 000011111111111111123445667899999999999999999999999999999876655543
No 89
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.8e-45 Score=320.97 Aligned_cols=270 Identities=25% Similarity=0.385 Sum_probs=214.7
Q ss_pred ChHHHHHHhcCccccceeccCCeEEEEEeEEC-------CcceEEEeccccc----cHHHHHHHHHHHhc--CCCceeee
Q 041031 3 SYNEVRDATSNFSTSLKIGQGSYGSVYLGKLR-------GKNAAIKQMKNTK----SKEFSSELKILCKV--HSNLIELI 69 (313)
Q Consensus 3 ~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~-------~~~~aiK~~~~~~----~~~~~~e~~~l~~l--h~~i~~~~ 69 (313)
+........++|.+.+.||+|+||.||+|.+. ++.||||.+.... ...+.+|+.+++.+ ||||++++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 34455556789999999999999999999853 4789999987653 23477899999999 89999999
Q ss_pred eEEEeCC-eEEEEEeecCCCChhhhhcCCCCC-----------CCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEecc
Q 041031 70 GYAAGGD-SLFLVYEYAQNGALSDHLHWPSVK-----------GKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDV 137 (313)
Q Consensus 70 ~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~~-----------~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di 137 (313)
+++...+ ..+++|||+++++|.+++...... ....+++..++.++.|++.||.|||+.+ ++|+||
T Consensus 98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~di 174 (316)
T 2xir_A 98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 174 (316)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSCC
T ss_pred EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---cccccC
Confidence 9987654 589999999999999999643211 0223899999999999999999999999 999999
Q ss_pred CCCCeeeCCCCcEEEeeccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccC
Q 041031 138 KTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSR 216 (313)
Q Consensus 138 ~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~ 216 (313)
||+||+++.++.++|+|||++......... .......+++.|+|||++.+..++.++||||||+++|+|++ |..||..
T Consensus 175 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 253 (316)
T 2xir_A 175 AARNILLSEKNVVKICDFGLARDIYKDPDY-VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253 (316)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTS-EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred ccceEEECCCCCEEECCCccccccccCccc-eeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence 999999999999999999999865543221 12233457889999999999999999999999999999998 9999976
Q ss_pred CCCCCCCccccchhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHH
Q 041031 217 DANPGNNQYTEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHI 296 (313)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~ 296 (313)
..... .....+....... .....+..+.+++.+||+.||.+|||+.++++.|+.+
T Consensus 254 ~~~~~----------------------~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 308 (316)
T 2xir_A 254 VKIDE----------------------EFCRRLKEGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308 (316)
T ss_dssp CCCSH----------------------HHHHHHHHTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cchhH----------------------HHHHHhccCccCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 54320 1122222221111 1223456788999999999999999999999999999
Q ss_pred Hhccc
Q 041031 297 LISSK 301 (313)
Q Consensus 297 ~~~~~ 301 (313)
..+..
T Consensus 309 ~~~~~ 313 (316)
T 2xir_A 309 LQANA 313 (316)
T ss_dssp HHHHC
T ss_pred Hhhhc
Confidence 87654
No 90
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=3.5e-45 Score=315.53 Aligned_cols=257 Identities=29% Similarity=0.551 Sum_probs=197.6
Q ss_pred HhcCccccceeccCCeEEEEEeEECCcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEe
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYE 83 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e 83 (313)
..++|++.++||+|+||.||+|++.+ .+|+|.++... .+.+.+|+.+++.+ ||||++++++. .....++|||
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~~-~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESSS-EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred CccceeeeeEecCCCCeEEEEEEEcC-ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 35789999999999999999998875 49999986443 34578899999999 99999999965 5556899999
Q ss_pred ecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccccC
Q 041031 84 YAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEH 163 (313)
Q Consensus 84 ~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~~ 163 (313)
|+.+++|.+++. .....+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.....
T Consensus 100 ~~~~~~L~~~l~----~~~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 172 (289)
T 3og7_A 100 WCEGSSLYHHLH----ASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR 172 (289)
T ss_dssp CCCEEEHHHHHT----TC---CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred ecCCCcHHHHHh----hccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceecccccc
Confidence 999999999984 34467899999999999999999999999 99999999999999999999999999876543
Q ss_pred ChhhhhhcccccccccccCCcccc---CCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhc
Q 041031 164 SPEIAAAASRIVGTFGYLAPEYVR---DGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240 (313)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~aPE~~~---~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (313)
... ........+++.|+|||++. +..++.++||||||+++|+|++|..||...... .
T Consensus 173 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--------~----------- 232 (289)
T 3og7_A 173 WSG-SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR--------D----------- 232 (289)
T ss_dssp ------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH--------H-----------
T ss_pred ccc-cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH--------H-----------
Confidence 221 12223346899999999996 566888999999999999999999999765432 0
Q ss_pred CcHHHHHHhhh-hcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHh
Q 041031 241 DTKDFMAKLTE-CLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILI 298 (313)
Q Consensus 241 ~~~~~~~~l~~-~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 298 (313)
.....+.. ...+........++..+.+|+.+||+.||.+|||+.++++.|+++..
T Consensus 233 ---~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 233 ---QIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp ---HHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred ---HHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 11111111 22233333445566789999999999999999999999999998754
No 91
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=6.4e-45 Score=318.13 Aligned_cols=268 Identities=26% Similarity=0.396 Sum_probs=208.5
Q ss_pred cCc-cccceeccCCeEEEEEeEEC------CcceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEe--CCe
Q 041031 12 SNF-STSLKIGQGSYGSVYLGKLR------GKNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAG--GDS 77 (313)
Q Consensus 12 ~~y-~~~~~lg~g~~g~v~~~~~~------~~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~--~~~ 77 (313)
.+| +++++||+|+||.||++.+. ++.||||++.... ...+.+|+.+++.+ ||||+++++++.+ ...
T Consensus 30 ~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (318)
T 3lxp_A 30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAAS 109 (318)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTE
T ss_pred HHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCce
Confidence 345 99999999999999988653 6789999998654 34478999999999 9999999999987 467
Q ss_pred EEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccc
Q 041031 78 LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGL 157 (313)
Q Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~ 157 (313)
+++||||+++++|.+++. ...+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||+
T Consensus 110 ~~lv~e~~~~~~L~~~l~------~~~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~ 180 (318)
T 3lxp_A 110 LQLVMEYVPLGSLRDYLP------RHSIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGL 180 (318)
T ss_dssp EEEEECCCTTCBHHHHGG------GSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGG
T ss_pred EEEEEecccCCcHHHHHh------hCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCccc
Confidence 899999999999999984 234899999999999999999999999 99999999999999999999999999
Q ss_pred cccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHH
Q 041031 158 VKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLA 237 (313)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 237 (313)
+.................++..|+|||++.+..++.++||||||+++|+|++|..||...... ....
T Consensus 181 a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~-------------~~~~ 247 (318)
T 3lxp_A 181 AKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTK-------------FLEL 247 (318)
T ss_dssp CEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH-------------HHHH
T ss_pred cccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchh-------------hhhh
Confidence 987664432222233345788899999999989999999999999999999999998643210 0000
Q ss_pred H-hcCcHHHHHHhhhhcC-CCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhccc
Q 041031 238 V-FNDTKDFMAKLTECLD-PNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSK 301 (313)
Q Consensus 238 ~-~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~ 301 (313)
. ..........+...+. ..........+..+.+|+++||+.||.+|||+.++++.|+.+.....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 313 (318)
T 3lxp_A 248 IGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313 (318)
T ss_dssp HCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred hcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence 0 0000000111111111 11112344556789999999999999999999999999999876543
No 92
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=8.2e-46 Score=333.46 Aligned_cols=252 Identities=22% Similarity=0.315 Sum_probs=204.7
Q ss_pred HHHHHhcCccccceeccCCeEEEEEeEEC--CcceEEEecccc------ccHHHHHHHHHHHhc-CCCceeeeeEEEeCC
Q 041031 6 EVRDATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT------KSKEFSSELKILCKV-HSNLIELIGYAAGGD 76 (313)
Q Consensus 6 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~------~~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~ 76 (313)
.++...++|.+.++||+|+||.||+|+++ ++.||+|++... ....+.+|..+++.+ ||||+++++++.+.+
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 142 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 142 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence 44455689999999999999999999997 778999998642 244578899999999 999999999999999
Q ss_pred eEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecc
Q 041031 77 SLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFG 156 (313)
Q Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg 156 (313)
.+++||||+++|+|.+++. ...+++..++.++.|++.||.|||+++ |+|+||||+||+++.+|.+||+|||
T Consensus 143 ~~~lV~E~~~gg~L~~~l~------~~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFG 213 (410)
T 3v8s_A 143 YLYMVMEYMPGGDLVNLMS------NYDVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFG 213 (410)
T ss_dssp EEEEEECCCTTEEHHHHHH------HCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCT
T ss_pred EEEEEEeCCCCCcHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEeccc
Confidence 9999999999999999984 235899999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCChhhhhhcccccccccccCCccccCCC----CCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHH
Q 041031 157 LVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC----VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLV 232 (313)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~----~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~ 232 (313)
++........ .......+|+.|+|||++.+.. ++.++|||||||++|+|++|..||.+....
T Consensus 214 ~a~~~~~~~~--~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~------------ 279 (410)
T 3v8s_A 214 TCMKMNKEGM--VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV------------ 279 (410)
T ss_dssp TCEECCTTSE--EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH------------
T ss_pred eeEeeccCCc--ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh------------
Confidence 9976554321 1233457999999999998765 789999999999999999999999754321
Q ss_pred HHHHHHhcCcHHHHHHhhhh-cCCCCCCCCHHHHHHHHHHHhhccccCcCC--CCCHHHHHHH
Q 041031 233 DYMLAVFNDTKDFMAKLTEC-LDPNLTRYHKDSMLQMALLSKDCVDENWKR--RPDMSNAAIR 292 (313)
Q Consensus 233 ~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~--Rps~~~ll~~ 292 (313)
+....+... ...... .....+..+.+||.+||..+|.+ ||+++||++.
T Consensus 280 -----------~~~~~i~~~~~~~~~p-~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 280 -----------GTYSKIMNHKNSLTFP-DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp -----------HHHHHHHTHHHHCCCC-TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred -----------hHHHHHHhccccccCC-CcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 111111110 000111 11234567889999999999988 9999999865
No 93
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=3.7e-45 Score=318.53 Aligned_cols=263 Identities=23% Similarity=0.377 Sum_probs=213.1
Q ss_pred HhcCccccceeccCCeEEEEEeEEC-------CcceEEEeccccc----cHHHHHHHHHHHhc--CCCceeeeeEEEeCC
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR-------GKNAAIKQMKNTK----SKEFSSELKILCKV--HSNLIELIGYAAGGD 76 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~-------~~~~aiK~~~~~~----~~~~~~e~~~l~~l--h~~i~~~~~~~~~~~ 76 (313)
..++|.+.+.||+|+||.||+|.+. ++.||+|.+.... .+.+.+|+.+++.+ ||||+++++++.+.+
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 3578999999999999999999862 5689999997653 34578999999999 999999999999999
Q ss_pred eEEEEEeecCCCChhhhhcCCCC-------------CCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCee
Q 041031 77 SLFLVYEYAQNGALSDHLHWPSV-------------KGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNIL 143 (313)
Q Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~-------------~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil 143 (313)
..++||||+++++|.+++..... .....+++..++.++.|++.||+|||+++ ++|+||||+||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil 177 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNIL 177 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEE
Confidence 99999999999999999864321 11235899999999999999999999999 999999999999
Q ss_pred eCCCCcEEEeeccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCC
Q 041031 144 LDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGN 222 (313)
Q Consensus 144 ~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~ 222 (313)
++.++.++|+|||++......... .......+++.|+|||++.+..++.++||||||+++|+|++ |..||.......
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~- 255 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNY-VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS- 255 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTS-EECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH-
T ss_pred EcCCCCEEEccccccccccccccc-eeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh-
Confidence 999999999999998876543221 12223456788999999999999999999999999999999 999997654320
Q ss_pred CccccchhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhccc
Q 041031 223 NQYTEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSK 301 (313)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~ 301 (313)
.....+....... .....+..+.+++.+||+.||.+|||+.++++.|+++..+..
T Consensus 256 ---------------------~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 310 (313)
T 1t46_A 256 ---------------------KFYKMIKEGFRML---SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310 (313)
T ss_dssp ---------------------HHHHHHHHTCCCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred ---------------------HHHHHhccCCCCC---CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence 1122222222211 123345678999999999999999999999999999887654
No 94
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=5.4e-45 Score=319.87 Aligned_cols=250 Identities=22% Similarity=0.371 Sum_probs=197.1
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEeCC------
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAGGD------ 76 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~------ 76 (313)
..++|++.+.||+|+||.||+|++. ++.||||++.... .+.+.+|+.+++.+ ||||+++++++.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 4578999999999999999999997 8889999986432 45688999999999 999999999986543
Q ss_pred ---------------------------------------------------eEEEEEeecCCCChhhhhcCCCCCCCCCc
Q 041031 77 ---------------------------------------------------SLFLVYEYAQNGALSDHLHWPSVKGKKPL 105 (313)
Q Consensus 77 ---------------------------------------------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~l 105 (313)
..+++|||+++++|.+++.... .....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~ 161 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC--SLEDR 161 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC--SGGGS
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc--Cccch
Confidence 3799999999999999996432 22345
Q ss_pred cHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccccCChhhh---------hhcccccc
Q 041031 106 AWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIA---------AAASRIVG 176 (313)
Q Consensus 106 ~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~---------~~~~~~~~ 176 (313)
....++.++.|++.||+|||+++ ++|+||||+||+++.++.+||+|||++.......... .......+
T Consensus 162 ~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~g 238 (332)
T 3qd2_B 162 EHGVCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG 238 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-
T ss_pred hhHHHHHHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCC
Confidence 66678999999999999999999 9999999999999999999999999998766542211 11223468
Q ss_pred cccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcCcHHHHHHhhhhcCCC
Q 041031 177 TFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDFMAKLTECLDPN 256 (313)
Q Consensus 177 ~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 256 (313)
|+.|+|||++.+..++.++||||||+++|+|++|..|+.. ............
T Consensus 239 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~----------------------------~~~~~~~~~~~~ 290 (332)
T 3qd2_B 239 TKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME----------------------------RVRIITDVRNLK 290 (332)
T ss_dssp CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH----------------------------HHHHHHHHHTTC
T ss_pred CcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH----------------------------HHHHHHHhhccC
Confidence 9999999999999999999999999999999998776521 111111112222
Q ss_pred CCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 257 LTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 257 ~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
...........+.+|+.+||+.||.+|||+.|+++.
T Consensus 291 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 291 FPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp CCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred CCcccccCChhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 222233445677899999999999999999999863
No 95
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=4.4e-45 Score=314.74 Aligned_cols=262 Identities=24% Similarity=0.346 Sum_probs=197.4
Q ss_pred cCccccceeccCCeEEEEEeEEC-CcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEee
Q 041031 12 SNFSTSLKIGQGSYGSVYLGKLR-GKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYEY 84 (313)
Q Consensus 12 ~~y~~~~~lg~g~~g~v~~~~~~-~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e~ 84 (313)
++|++.+.||+|+||.||+|.+. ++.+|+|.+.... ...+.+|+.+++.+ ||||+++++++.+.+..++|||+
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 68999999999999999999987 8899999986443 35678999999999 99999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccccCC
Q 041031 85 AQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHS 164 (313)
Q Consensus 85 ~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~~~ 164 (313)
+++ +|.+++. .....+++..++.++.|++.||+|||+++ ++|+||||+||+++.++.+||+|||++......
T Consensus 82 ~~~-~l~~~~~----~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (288)
T 1ob3_A 82 LDQ-DLKKLLD----VCEGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIP 153 (288)
T ss_dssp CSE-EHHHHHH----TSTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred cCC-CHHHHHH----hcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCcc
Confidence 965 8998885 33466899999999999999999999999 999999999999999999999999998765432
Q ss_pred hhhhhhcccccccccccCCccccC-CCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcCcH
Q 041031 165 PEIAAAASRIVGTFGYLAPEYVRD-GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTK 243 (313)
Q Consensus 165 ~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (313)
.. ......+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.... ..+............
T Consensus 154 ~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--------~~~~~~~~~~~~~~~ 222 (288)
T 1ob3_A 154 VR---KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA--------DQLMRIFRILGTPNS 222 (288)
T ss_dssp -----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHHHCCCCT
T ss_pred cc---ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHHHHCCCCh
Confidence 11 1223467999999999976 45899999999999999999999999754321 111111110000000
Q ss_pred HHHHHhhh--hcCCCCC--------CCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 244 DFMAKLTE--CLDPNLT--------RYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 244 ~~~~~l~~--~~~~~~~--------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
........ ..++... ......+..+.+|+.+||+.||++|||+.|+++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 223 KNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp TTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000000 0001100 0112345678899999999999999999999863
No 96
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.3e-45 Score=323.12 Aligned_cols=276 Identities=25% Similarity=0.386 Sum_probs=206.4
Q ss_pred HhcCccccceeccCCeEEEEEeEECCcceEEEeccccccHHHHHHHHHHHh--c-CCCceeeeeEEE-----eCCeEEEE
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCK--V-HSNLIELIGYAA-----GGDSLFLV 81 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~aiK~~~~~~~~~~~~e~~~l~~--l-h~~i~~~~~~~~-----~~~~~~lv 81 (313)
..++|++.+.||+|+||.||+|++.++.||||++..........|.+++.. + ||||+++++.+. ....+++|
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv 90 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLV 90 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEE
T ss_pred ChHHhheeeecccCCCeEEEEEEECCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEE
Confidence 467999999999999999999999999999999987777777667666554 5 999999998653 23367899
Q ss_pred EeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcC---------CCCceEEeccCCCCeeeCCCCcEEE
Q 041031 82 YEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQY---------TKPYYVHRDVKTSNILLDSNFRAKI 152 (313)
Q Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~---------~~~~i~h~di~p~nil~~~~~~~~l 152 (313)
|||+++|+|.+++.. ...++..++.++.|++.||+|||+. + ++|+||||+||+++.++.+||
T Consensus 91 ~e~~~~g~L~~~l~~------~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~---ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 91 MEYYPNGSLXKYLSL------HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA---ISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp ECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC---EECSSCSGGGEEECTTSCEEE
T ss_pred EecCCCCcHHHHHhh------cccchhHHHHHHHHHHHHHHHHHhhhccccccccc---eeecccccceEEEcCCCcEEE
Confidence 999999999999842 3347888999999999999999999 8 999999999999999999999
Q ss_pred eeccccccccCChh-----hhhhcccccccccccCCccccC-------CCCCCccchhhHHHHHHHHHhCCCCccCCCCC
Q 041031 153 ADFGLVKLLEHSPE-----IAAAASRIVGTFGYLAPEYVRD-------GCVTTKSDVYAFGVVLMELITGQQALSRDANP 220 (313)
Q Consensus 153 ~dfg~~~~~~~~~~-----~~~~~~~~~~~~~~~aPE~~~~-------~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~ 220 (313)
+|||++........ .........+|+.|+|||++.+ ..++.++|||||||++|+|++|..||......
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~ 241 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCC
T ss_pred eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccch
Confidence 99999987653221 1112223468999999999986 35667899999999999999998777554432
Q ss_pred CCCccccchhHHHHHHHHhcCcHHHHHHhhh-hcCCCCCC---CCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHH
Q 041031 221 GNNQYTEHRSLVDYMLAVFNDTKDFMAKLTE-CLDPNLTR---YHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHI 296 (313)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~---~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~ 296 (313)
......... .....+...+....+.. ...+.+.. .....+..+.+|+.+||+.||++|||+.|++++|+++
T Consensus 242 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~l 316 (336)
T 3g2f_A 242 PEYQMAFQT-----EVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAEL 316 (336)
T ss_dssp CCCCCTTHH-----HHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred hHHHHhhhc-----ccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHH
Confidence 211111100 00000111111111111 11222222 2345677899999999999999999999999999999
Q ss_pred Hhc
Q 041031 297 LIS 299 (313)
Q Consensus 297 ~~~ 299 (313)
+..
T Consensus 317 l~~ 319 (336)
T 3g2f_A 317 MMI 319 (336)
T ss_dssp HHC
T ss_pred HHH
Confidence 974
No 97
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=6.2e-45 Score=312.25 Aligned_cols=259 Identities=26% Similarity=0.484 Sum_probs=210.0
Q ss_pred HHHhcCccccceeccCCeEEEEEeEEC-CcceEEEecccc--ccHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEe
Q 041031 8 RDATSNFSTSLKIGQGSYGSVYLGKLR-GKNAAIKQMKNT--KSKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYE 83 (313)
Q Consensus 8 ~~~~~~y~~~~~lg~g~~g~v~~~~~~-~~~~aiK~~~~~--~~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e 83 (313)
+...++|++.+.||+|+||.||+|.+. +..+|+|.+... ..+.+.+|+++++.+ ||||+++++++.+ +..++|||
T Consensus 9 ~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e 87 (279)
T 1qpc_A 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITE 87 (279)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred ccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEe
Confidence 345688999999999999999999988 568999998765 356688999999999 9999999999874 45899999
Q ss_pred ecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccccC
Q 041031 84 YAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEH 163 (313)
Q Consensus 84 ~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~~ 163 (313)
++++++|.+++... ....+++..++.++.|++.||.|||+++ ++|+||+|+||++++++.++|+|||.+.....
T Consensus 88 ~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 161 (279)
T 1qpc_A 88 YMENGSLVDFLKTP---SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIED 161 (279)
T ss_dssp CCTTCBHHHHTTSH---HHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred cCCCCCHHHHHhcC---CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence 99999999998421 1136899999999999999999999999 99999999999999999999999999987654
Q ss_pred ChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchhHHHHHHHHhcCc
Q 041031 164 SPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLVDYMLAVFNDT 242 (313)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (313)
... .......++..|+|||++.+..++.++||||||+++|+|++ |..||......
T Consensus 162 ~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---------------------- 217 (279)
T 1qpc_A 162 NEY--TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP---------------------- 217 (279)
T ss_dssp SCE--ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH----------------------
T ss_pred ccc--ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH----------------------
Confidence 322 11222346778999999998889999999999999999999 89999654321
Q ss_pred HHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhccc
Q 041031 243 KDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSK 301 (313)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~ 301 (313)
+....+...... ......+..+.+++.+||+.||++|||+.++++.|+.+.....
T Consensus 218 -~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 272 (279)
T 1qpc_A 218 -EVIQNLERGYRM---VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272 (279)
T ss_dssp -HHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred -HHHHHHhcccCC---CCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhcc
Confidence 111222211111 1223445678999999999999999999999999999887643
No 98
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.7e-45 Score=324.64 Aligned_cols=246 Identities=25% Similarity=0.376 Sum_probs=201.5
Q ss_pred HHHHhcCccccceeccCCeEEEEEeEEC--CcceEEEecccc------ccHHHHHHHHHHHhc--CCCceeeeeEEEeCC
Q 041031 7 VRDATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT------KSKEFSSELKILCKV--HSNLIELIGYAAGGD 76 (313)
Q Consensus 7 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~------~~~~~~~e~~~l~~l--h~~i~~~~~~~~~~~ 76 (313)
.....++|.+.+.||+|+||.||+|+++ ++.||||+++.. .......|..++..+ ||||+++++++.+.+
T Consensus 12 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~ 91 (345)
T 1xjd_A 12 IKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE 91 (345)
T ss_dssp ----CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred CCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC
Confidence 3456789999999999999999999987 788999998753 345577888888876 999999999999999
Q ss_pred eEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecc
Q 041031 77 SLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFG 156 (313)
Q Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg 156 (313)
.+++||||+++|+|.+++. ....+++..++.++.|++.||.|||+++ ++|+||||+||+++.+|.++|+|||
T Consensus 92 ~~~lv~E~~~gg~L~~~l~-----~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG 163 (345)
T 1xjd_A 92 NLFFVMEYLNGGDLMYHIQ-----SCHKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFG 163 (345)
T ss_dssp EEEEEEECCTTCBHHHHHH-----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCT
T ss_pred EEEEEEeCCCCCcHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeECh
Confidence 9999999999999999984 3456899999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHH
Q 041031 157 LVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYML 236 (313)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 236 (313)
++....... .......+|+.|+|||++.+..++.++|+|||||++|+|++|..||.+....
T Consensus 164 ~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~---------------- 224 (345)
T 1xjd_A 164 MCKENMLGD---AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE---------------- 224 (345)
T ss_dssp TCBCCCCTT---CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----------------
T ss_pred hhhhcccCC---CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH----------------
Confidence 987543221 1233457899999999999999999999999999999999999999754321
Q ss_pred HHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHH-HHH
Q 041031 237 AVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMS-NAA 290 (313)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~-~ll 290 (313)
+....+... .+. .....+..+.+|+.+||..||.+||++. +++
T Consensus 225 -------~~~~~i~~~-~~~---~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 225 -------ELFHSIRMD-NPF---YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp -------HHHHHHHHC-CCC---CCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred -------HHHHHHHhC-CCC---CCcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 111111111 111 1223456788999999999999999997 664
No 99
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.9e-45 Score=339.58 Aligned_cols=257 Identities=24% Similarity=0.400 Sum_probs=213.0
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEecccc--ccHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEee
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT--KSKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYEY 84 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~--~~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e~ 84 (313)
..++|.+.++||+|+||.||+|.++ +..||||.++.. ..+.+.+|+.+++.+ ||||+++++++.+....++||||
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 4567899999999999999999998 778999999765 356788999999999 99999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccccCC
Q 041031 85 AQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHS 164 (313)
Q Consensus 85 ~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~~~ 164 (313)
+.+|+|.+++... ....++...++.++.|++.||+|||+++ ++|+||||+||+++.++.+||+|||++......
T Consensus 298 ~~~g~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 371 (495)
T 1opk_A 298 MTYGNLLDYLREC---NRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 371 (495)
T ss_dssp CTTCBHHHHHHHS---CTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECCTTC
T ss_pred cCCCCHHHHHHhc---CcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceeccCC
Confidence 9999999999522 2356889999999999999999999999 999999999999999999999999999875432
Q ss_pred hhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchhHHHHHHHHhcCcH
Q 041031 165 PEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTK 243 (313)
Q Consensus 165 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (313)
.. .......++..|+|||++.+..++.++||||||+++|+|++ |..||.+....
T Consensus 372 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~----------------------- 426 (495)
T 1opk_A 372 TY--TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS----------------------- 426 (495)
T ss_dssp CE--ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----------------------
T ss_pred ce--eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH-----------------------
Confidence 21 11122345678999999998899999999999999999999 99999765431
Q ss_pred HHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcc
Q 041031 244 DFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISS 300 (313)
Q Consensus 244 ~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 300 (313)
+....+...... .....++..+.+|+.+||+.||.+|||+.+|++.|+.+..+.
T Consensus 427 ~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~~ 480 (495)
T 1opk_A 427 QVYELLEKDYRM---ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 480 (495)
T ss_dssp GHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSSS
T ss_pred HHHHHHHcCCCC---CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhcc
Confidence 112222221111 123345567899999999999999999999999999987654
No 100
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.4e-45 Score=315.18 Aligned_cols=257 Identities=27% Similarity=0.379 Sum_probs=205.8
Q ss_pred HhcCccccceeccCCeEEEEEeEECC-----cceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEE
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLRG-----KNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLF 79 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~~-----~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~ 79 (313)
..++|.+.+.||+|+||.||+|.+.+ ..||+|.+.... .+.+.+|+.+++.+ ||||+++++++.+. ..+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCE
Confidence 46789999999999999999998752 249999987652 45578899999999 99999999998754 568
Q ss_pred EEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccc
Q 041031 80 LVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVK 159 (313)
Q Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~ 159 (313)
+|||++++++|.+++. .....++...++.++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||.+.
T Consensus 89 ~v~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 161 (281)
T 3cc6_A 89 IIMELYPYGELGHYLE----RNKNSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSR 161 (281)
T ss_dssp EEEECCTTCBHHHHHH----HHTTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGG
T ss_pred EEEecCCCCCHHHHHH----hccccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCc
Confidence 9999999999999985 23456899999999999999999999999 9999999999999999999999999988
Q ss_pred cccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchhHHHHHHHH
Q 041031 160 LLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLVDYMLAV 238 (313)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (313)
....... .......+++.|+|||++.+..++.++||||||+++|+|++ |..||......
T Consensus 162 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~------------------ 221 (281)
T 3cc6_A 162 YIEDEDY--YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK------------------ 221 (281)
T ss_dssp CC-----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG------------------
T ss_pred ccccccc--cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH------------------
Confidence 6554321 12223456789999999998899999999999999999998 99999654332
Q ss_pred hcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcccc
Q 041031 239 FNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSKE 302 (313)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~ 302 (313)
+....+....... .....+..+.+++.+||+.||.+|||+.++++.|+.+.....+
T Consensus 222 -----~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 277 (281)
T 3cc6_A 222 -----DVIGVLEKGDRLP---KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKD 277 (281)
T ss_dssp -----GHHHHHHHTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHhcCCCCC---CCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhhhh
Confidence 1112222111111 1223456788999999999999999999999999998876544
No 101
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=7.3e-45 Score=314.13 Aligned_cols=265 Identities=24% Similarity=0.287 Sum_probs=203.8
Q ss_pred HHhcCccccceeccCCeEEEEEeEEC--CcceEEEecccc-ccHHHHHHHHHHHhc-CCCceeeee-EEEeCCeEEEEEe
Q 041031 9 DATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT-KSKEFSSELKILCKV-HSNLIELIG-YAAGGDSLFLVYE 83 (313)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~-~~~~~~~e~~~l~~l-h~~i~~~~~-~~~~~~~~~lv~e 83 (313)
...++|++.+.||+|+||.||+|.+. ++.||||+.... ....+.+|+.+++.+ |++++..+. ++...+..+++||
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence 45688999999999999999999975 889999986544 345688999999999 666555554 4577888999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeee---CCCCcEEEeecccccc
Q 041031 84 YAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILL---DSNFRAKIADFGLVKL 160 (313)
Q Consensus 84 ~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~---~~~~~~~l~dfg~~~~ 160 (313)
++ +++|.+++. .....+++..++.++.|++.||+|||+++ ++|+||||+||++ ++++.++|+|||++..
T Consensus 86 ~~-~~~L~~~~~----~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~ 157 (296)
T 4hgt_A 86 LL-GPSLEDLFN----FCSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp CC-CCBHHHHHH----HTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred cc-CCCHHHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCcccee
Confidence 99 899999985 23456999999999999999999999999 9999999999999 7889999999999987
Q ss_pred ccCChhhh----hhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHH
Q 041031 161 LEHSPEIA----AAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYML 236 (313)
Q Consensus 161 ~~~~~~~~----~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 236 (313)
........ .......+++.|+|||++.+..++.++|||||||++|+|++|+.||.......... .......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-----~~~~~~~ 232 (296)
T 4hgt_A 158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ-----KYERISE 232 (296)
T ss_dssp CBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS-----HHHHHHH
T ss_pred ccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhh-----hhhhhhc
Confidence 65432211 12234578999999999999999999999999999999999999998655432111 1111111
Q ss_pred HHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcc
Q 041031 237 AVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISS 300 (313)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 300 (313)
...... .... ....+..+.+++.+||+.||++|||+.++++.|+.+..+.
T Consensus 233 ~~~~~~-------~~~~-------~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~ 282 (296)
T 4hgt_A 233 KKMSTP-------IEVL-------CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HHHHSC-------HHHH-------TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred ccccch-------hhhh-------hccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Confidence 110000 0000 1122457889999999999999999999999999998853
No 102
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=4e-45 Score=320.62 Aligned_cols=254 Identities=24% Similarity=0.377 Sum_probs=202.7
Q ss_pred hcCccccceeccCCeEEEEEeEEC--Ccc----eEEEecccc----ccHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKN----AAIKQMKNT----KSKEFSSELKILCKV-HSNLIELIGYAAGGDSLF 79 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~----~aiK~~~~~----~~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~ 79 (313)
.++|++.++||+|+||.||+|.+. ++. +|+|.+... ....+.+|+.+++.+ ||||+++++++.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 468999999999999999999975 333 588887543 345688999999999 999999999998765 77
Q ss_pred EEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccc
Q 041031 80 LVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVK 159 (313)
Q Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~ 159 (313)
++++++.+|+|.+++. .....+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||++.
T Consensus 93 ~v~e~~~~g~L~~~l~----~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 165 (327)
T 3poz_A 93 LITQLMPFGCLLDYVR----EHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEEECCTTCBHHHHHH----HSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHH
T ss_pred EEEEecCCCcHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCccee
Confidence 8999999999999985 33467899999999999999999999999 9999999999999999999999999988
Q ss_pred cccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchhHHHHHHHH
Q 041031 160 LLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLVDYMLAV 238 (313)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (313)
........ .......+|+.|+|||++.+..++.++||||||+++|+|++ |..||......
T Consensus 166 ~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------------------ 226 (327)
T 3poz_A 166 LLGAEEKE-YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS------------------ 226 (327)
T ss_dssp HHTTTCC--------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG------------------
T ss_pred EccCCccc-ccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH------------------
Confidence 65433221 12222356789999999999999999999999999999999 99999754432
Q ss_pred hcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhc
Q 041031 239 FNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILIS 299 (313)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 299 (313)
+....+...... ......+..+.+++.+||+.||.+|||+.++++.|+.+..+
T Consensus 227 -----~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 227 -----EISSILEKGERL---PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -----GHHHHHHTTCCC---CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred -----HHHHHHHcCCCC---CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 112222221111 12334556788999999999999999999999999998764
No 103
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=2.4e-45 Score=335.80 Aligned_cols=257 Identities=24% Similarity=0.446 Sum_probs=210.9
Q ss_pred HHhcCccccceeccCCeEEEEEeEEC-CcceEEEecccc--ccHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEee
Q 041031 9 DATSNFSTSLKIGQGSYGSVYLGKLR-GKNAAIKQMKNT--KSKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYEY 84 (313)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~v~~~~~~-~~~~aiK~~~~~--~~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e~ 84 (313)
...++|.+.+.||+|+||.||+|.+. +..||||.++.. ..+.+.+|+.+++.+ ||||+++++++. .+..++||||
T Consensus 185 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~ 263 (454)
T 1qcf_A 185 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEF 263 (454)
T ss_dssp CCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECC
T ss_pred echHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEee
Confidence 34578999999999999999999997 778999999864 356788999999999 999999999987 5678999999
Q ss_pred cCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccccCC
Q 041031 85 AQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHS 164 (313)
Q Consensus 85 ~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~~~ 164 (313)
+.+|+|.+++... ....++...++.++.|++.||+|||+++ ++|+||||+||+++.++.+||+|||++......
T Consensus 264 ~~~g~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~ 337 (454)
T 1qcf_A 264 MAKGSLLDFLKSD---EGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDN 337 (454)
T ss_dssp CTTCBHHHHHHSH---HHHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCH
T ss_pred cCCCcHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCC
Confidence 9999999999522 1235788899999999999999999999 999999999999999999999999999876532
Q ss_pred hhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchhHHHHHHHHhcCcH
Q 041031 165 PEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTK 243 (313)
Q Consensus 165 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (313)
.. .......++..|+|||++.+..++.++||||||+++|+|+| |..||.+....
T Consensus 338 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~----------------------- 392 (454)
T 1qcf_A 338 EY--TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP----------------------- 392 (454)
T ss_dssp HH--HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----------------------
T ss_pred ce--eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH-----------------------
Confidence 21 12222346788999999998899999999999999999999 99999754321
Q ss_pred HHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcc
Q 041031 244 DFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISS 300 (313)
Q Consensus 244 ~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 300 (313)
+....+....... ....++..+.+|+.+||+.||.+|||+.+|++.|+.+....
T Consensus 393 ~~~~~i~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 393 EVIRALERGYRMP---RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp HHHHHHHHTCCCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred HHHHHHHcCCCCC---CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 1122222221111 22345667899999999999999999999999999987654
No 104
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=6e-45 Score=321.52 Aligned_cols=247 Identities=24% Similarity=0.351 Sum_probs=198.0
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc------cHHHHHHHHHHHhc--CCCceeeeeEEEeCCeEEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK------SKEFSSELKILCKV--HSNLIELIGYAAGGDSLFL 80 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~------~~~~~~e~~~l~~l--h~~i~~~~~~~~~~~~~~l 80 (313)
.++|++.+.||+|+||.||+|+++ ++.||+|++.... ...+.+|..+++.+ ||||+++++++.+.+.+++
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 578999999999999999999987 7889999987542 33467899999887 9999999999999999999
Q ss_pred EEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccccc
Q 041031 81 VYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKL 160 (313)
Q Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~ 160 (313)
||||+++++|.+++. ....+++..++.++.|++.||.|||+++ ++|+||||+||+++.+|.+||+|||++..
T Consensus 88 v~e~~~gg~L~~~l~-----~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~ 159 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQ-----RQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE 159 (345)
T ss_dssp EECCCCSCBHHHHHH-----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBC
T ss_pred EEeCCCCCcHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEecccccc
Confidence 999999999999984 3456899999999999999999999999 99999999999999999999999999875
Q ss_pred ccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhc
Q 041031 161 LEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240 (313)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (313)
..... .......+|+.|+|||++.+..++.++|+|||||++|+|++|..||...............
T Consensus 160 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~----------- 225 (345)
T 3a8x_A 160 GLRPG---DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED----------- 225 (345)
T ss_dssp SCCTT---CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHH-----------
T ss_pred ccCCC---CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHH-----------
Confidence 33221 2233457899999999999999999999999999999999999999654332110000000
Q ss_pred CcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCH
Q 041031 241 DTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDM 286 (313)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 286 (313)
.....+... ... .....+..+.+|+++||+.||.+||++
T Consensus 226 ---~~~~~i~~~-~~~---~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 226 ---YLFQVILEK-QIR---IPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp ---HHHHHHHHC-CCC---CCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred ---HHHHHHHcC-CCC---CCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 111111111 111 223445678899999999999999996
No 105
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=3e-46 Score=325.51 Aligned_cols=258 Identities=22% Similarity=0.390 Sum_probs=194.2
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc------cHHHHHHHHHHHhc-CCCceeeeeEEEeCCe---
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK------SKEFSSELKILCKV-HSNLIELIGYAAGGDS--- 77 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~------~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~--- 77 (313)
..++|++.+.||+|+||.||+|.+. ++.||||++.... ...+.+|+.+++.+ ||||+++++++.....
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 89 (311)
T 3ork_A 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP 89 (311)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence 4678999999999999999999986 7889999997642 23467889999888 9999999999876543
Q ss_pred -EEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecc
Q 041031 78 -LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFG 156 (313)
Q Consensus 78 -~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg 156 (313)
.++||||+++++|.+++. ....+++..++.++.|++.||+|||+++ ++|+||||+||+++.++.++|+|||
T Consensus 90 ~~~lv~e~~~g~~L~~~l~-----~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg 161 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVH-----TEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFG 161 (311)
T ss_dssp EEEEEEECCCEEEHHHHHH-----HHCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCS
T ss_pred ccEEEEecCCCCCHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeecc
Confidence 499999999999999984 3456899999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHH
Q 041031 157 LVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYML 236 (313)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 236 (313)
++.................+++.|+|||++.+..++.++||||||+++|+|++|..||.+.... ....
T Consensus 162 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~------------~~~~ 229 (311)
T 3ork_A 162 IARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV------------SVAY 229 (311)
T ss_dssp CC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH------------HHHH
T ss_pred CcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH------------HHHH
Confidence 9987654433333333456899999999999999999999999999999999999999754321 0000
Q ss_pred HHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHH-HHHHHHHh
Q 041031 237 AVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAA-IRLSHILI 298 (313)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll-~~l~~~~~ 298 (313)
........+ ........+..+.+++.+||+.||.+||+..+++ ..+.++..
T Consensus 230 ----------~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 281 (311)
T 3ork_A 230 ----------QHVREDPIP-PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281 (311)
T ss_dssp ----------HHHHCCCCC-HHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHT
T ss_pred ----------HHhcCCCCC-cccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhc
Confidence 000000000 0001223456788999999999999999665554 55555543
No 106
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7e-45 Score=321.22 Aligned_cols=261 Identities=23% Similarity=0.242 Sum_probs=203.1
Q ss_pred HHHHHhcCccccceeccCCeEEEEEeEEC--CcceEEEecccc--------ccHHHHHHHHHHHhc-CCCceeeeeEEEe
Q 041031 6 EVRDATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT--------KSKEFSSELKILCKV-HSNLIELIGYAAG 74 (313)
Q Consensus 6 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~--------~~~~~~~e~~~l~~l-h~~i~~~~~~~~~ 74 (313)
++....++|++.+.||+|+||.||+|.+. ++.+|+|++... ..+.+.+|+.+++.+ ||||+++++++.+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 46778899999999999999999999987 778999988643 245688899999999 9999999999999
Q ss_pred CCeEEEEEeecCCCChhhhhcCCCC-----------------------------------CCCCCccHHHHHHHHHHHHH
Q 041031 75 GDSLFLVYEYAQNGALSDHLHWPSV-----------------------------------KGKKPLAWTTRVQIALDAAK 119 (313)
Q Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~~~~-----------------------------------~~~~~l~~~~~~~~~~~i~~ 119 (313)
.+..++||||+++++|.+++..... .....+++..++.++.|++.
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 9999999999999999998842100 01223467888999999999
Q ss_pred HHHHHhcCCCCceEEeccCCCCeeeCCCC--cEEEeeccccccccCChh-hhhhcccccccccccCCccccC--CCCCCc
Q 041031 120 GLEYIHQYTKPYYVHRDVKTSNILLDSNF--RAKIADFGLVKLLEHSPE-IAAAASRIVGTFGYLAPEYVRD--GCVTTK 194 (313)
Q Consensus 120 ~l~~lh~~~~~~i~h~di~p~nil~~~~~--~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~~~~aPE~~~~--~~~~~~ 194 (313)
||+|||+.+ ++|+||||+||+++.++ .++|+|||++........ .........+++.|+|||++.+ ..++.+
T Consensus 180 ~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 256 (345)
T 3hko_A 180 ALHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK 256 (345)
T ss_dssp HHHHHHHTT---EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred HHHHHHHCC---ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence 999999999 99999999999998776 899999999986543211 1112234568999999999975 678999
Q ss_pred cchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhh
Q 041031 195 SDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKD 274 (313)
Q Consensus 195 ~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~ 274 (313)
+||||||+++|+|++|..||...... +....+...............+..+.+|+.+
T Consensus 257 ~DiwslG~il~el~~g~~pf~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 313 (345)
T 3hko_A 257 CDAWSAGVLLHLLLMGAVPFPGVNDA-----------------------DTISQVLNKKLCFENPNYNVLSPLARDLLSN 313 (345)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHH-----------------------HHHHHHHHCCCCTTSGGGGGSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCChH-----------------------HHHHHHHhcccccCCcccccCCHHHHHHHHH
Confidence 99999999999999999999755431 1111111111111111223356778999999
Q ss_pred ccccCcCCCCCHHHHHHH
Q 041031 275 CVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 275 cl~~~p~~Rps~~~ll~~ 292 (313)
||+.||.+|||+.++++.
T Consensus 314 ~l~~~p~~Rps~~~~l~h 331 (345)
T 3hko_A 314 LLNRNVDERFDAMRALQH 331 (345)
T ss_dssp HSCSCTTTSCCHHHHHHS
T ss_pred HcCCChhHCCCHHHHhcC
Confidence 999999999999999874
No 107
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2.9e-45 Score=321.23 Aligned_cols=255 Identities=23% Similarity=0.368 Sum_probs=203.5
Q ss_pred hcCccccceeccCCeEEEEEeEEC--Ccc----eEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKN----AAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLF 79 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~----~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~ 79 (313)
.++|++.+.||+|+||.||+|.+. ++. +++|.+.... ...+.+|+.+++.+ ||||+++++++.+ +..+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~ 90 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG-SSLQ 90 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB-SSEE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-CccE
Confidence 468999999999999999999986 443 7777765332 34567899999999 9999999999874 5688
Q ss_pred EEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccc
Q 041031 80 LVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVK 159 (313)
Q Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~ 159 (313)
+||||+.+++|.+++. .....+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.
T Consensus 91 ~v~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 163 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVR----QHRGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVAD 163 (325)
T ss_dssp EEEECCTTCBSHHHHH----SSGGGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGG
T ss_pred EEEEeCCCCCHHHHHH----HccccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCccc
Confidence 9999999999999985 23457889999999999999999999999 9999999999999999999999999998
Q ss_pred cccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchhHHHHHHHH
Q 041031 160 LLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLVDYMLAV 238 (313)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (313)
........ .......++..|+|||++.+..++.++||||||+++|+|++ |..||......
T Consensus 164 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~------------------ 224 (325)
T 3kex_A 164 LLPPDDKQ-LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA------------------ 224 (325)
T ss_dssp GSCCCTTC-CC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT------------------
T ss_pred ccCccccc-ccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH------------------
Confidence 76543221 12233457789999999999999999999999999999999 99999765442
Q ss_pred hcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcc
Q 041031 239 FNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISS 300 (313)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 300 (313)
+....+....... .....+..+.+++.+||+.||.+|||+.++++.|+++..+.
T Consensus 225 -----~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~ 278 (325)
T 3kex_A 225 -----EVPDLLEKGERLA---QPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDP 278 (325)
T ss_dssp -----HHHHHHHTTCBCC---CCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred -----HHHHHHHcCCCCC---CCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 1222222211111 12223445778999999999999999999999999987643
No 108
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=2.2e-45 Score=314.91 Aligned_cols=253 Identities=28% Similarity=0.474 Sum_probs=202.8
Q ss_pred HhcCccccceeccCCeEEEEEeEECCcceEEEeccccc-cHHHHHHHHHHHhc-CCCceeeeeEEEeC-CeEEEEEeecC
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTK-SKEFSSELKILCKV-HSNLIELIGYAAGG-DSLFLVYEYAQ 86 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~aiK~~~~~~-~~~~~~e~~~l~~l-h~~i~~~~~~~~~~-~~~~lv~e~~~ 86 (313)
..++|++.+.||+|+||.||+|.+.++.+|||.+.... .+.+.+|+.+++.+ ||||+++++++... +..++|||+++
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 98 (278)
T 1byg_A 19 NMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 98 (278)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCT
T ss_pred ChhhceEEeEEecCCCceEEEEEEcCCEEEEEEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCC
Confidence 35789999999999999999999999999999998654 55688999999999 99999999997544 47899999999
Q ss_pred CCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccccCChh
Q 041031 87 NGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPE 166 (313)
Q Consensus 87 ~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 166 (313)
+++|.+++... ....+++..++.++.|++.||+|||+++ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 99 ~~~L~~~l~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 171 (278)
T 1byg_A 99 KGSLVDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ- 171 (278)
T ss_dssp TEEHHHHHHHH---HHHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred CCCHHHHHHhc---ccccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeeccccccccccc-
Confidence 99999998421 1123788899999999999999999999 9999999999999999999999999987544321
Q ss_pred hhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchhHHHHHHHHhcCcHHH
Q 041031 167 IAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDF 245 (313)
Q Consensus 167 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (313)
....+++.|+|||++.+..++.++||||||+++|+|++ |..||...... +.
T Consensus 172 -----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-----------------------~~ 223 (278)
T 1byg_A 172 -----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----------------------DV 223 (278)
T ss_dssp ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG-----------------------GH
T ss_pred -----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-----------------------HH
Confidence 12246789999999998899999999999999999998 99999754321 11
Q ss_pred HHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcc
Q 041031 246 MAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISS 300 (313)
Q Consensus 246 ~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 300 (313)
...+...... ......+..+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 224 ~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 224 VPRVEKGYKM---DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp HHHHTTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HHHHhcCCCC---CCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 2222211111 123345567899999999999999999999999999987653
No 109
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.4e-45 Score=322.69 Aligned_cols=267 Identities=25% Similarity=0.399 Sum_probs=214.0
Q ss_pred cChHHHHHHhcCccccceeccCCeEEEEEeEEC-------CcceEEEeccccc----cHHHHHHHHHHHhc-CCCceeee
Q 041031 2 FSYNEVRDATSNFSTSLKIGQGSYGSVYLGKLR-------GKNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELI 69 (313)
Q Consensus 2 ~~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~-------~~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~ 69 (313)
|+.++.+...++|++.+.||+|+||.||+|.+. ++.||||.+.... ...+.+|+.+++.+ ||||++++
T Consensus 15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 94 (322)
T 1p4o_A 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 94 (322)
T ss_dssp CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence 445556667889999999999999999999865 5679999997543 23477899999999 99999999
Q ss_pred eEEEeCCeEEEEEeecCCCChhhhhcCCCC-----CCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeee
Q 041031 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSV-----KGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILL 144 (313)
Q Consensus 70 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~ 144 (313)
+++.+.+..++|||++++++|.+++..... .....+++..++.++.|++.||.|||+++ ++|+||||+||++
T Consensus 95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli 171 (322)
T 1p4o_A 95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMV 171 (322)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEE
T ss_pred EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEE
Confidence 999999999999999999999999842210 11245688999999999999999999999 9999999999999
Q ss_pred CCCCcEEEeeccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCC
Q 041031 145 DSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNN 223 (313)
Q Consensus 145 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~ 223 (313)
+.++.++|+|||++......... .......+++.|+|||++.+..++.++||||||+++|+|++ |..||......
T Consensus 172 ~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--- 247 (322)
T 1p4o_A 172 AEDFTVKIGDFGMTRDIYETDYY-RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE--- 247 (322)
T ss_dssp CTTCCEEECCTTCCCGGGGGGCE-EGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH---
T ss_pred cCCCeEEECcCcccccccccccc-ccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH---
Confidence 99999999999998765432211 12223356788999999999899999999999999999999 88998654321
Q ss_pred ccccchhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHh
Q 041031 224 QYTEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILI 298 (313)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 298 (313)
+....+ ............+..+.+++.+||+.||.+|||+.++++.|++++.
T Consensus 248 --------------------~~~~~~---~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 248 --------------------QVLRFV---MEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp --------------------HHHHHH---HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred --------------------HHHHHH---HcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 111111 1112222234455678999999999999999999999999998765
No 110
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=6.1e-45 Score=322.01 Aligned_cols=241 Identities=23% Similarity=0.346 Sum_probs=202.9
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEecccc------ccHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT------KSKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLV 81 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~------~~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv 81 (313)
.++|.+++.||+|+||.||+|++. ++.||+|++... ..+.+.+|+.+++.+ ||||+++++++.+.+.+++|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 578999999999999999999987 789999998643 245577899999999 99999999999999999999
Q ss_pred EeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccc
Q 041031 82 YEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL 161 (313)
Q Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~ 161 (313)
|||+++++|.+++. ....+++..++.++.|++.||.|||+++ ++|+||||+||+++.+|.++|+|||++...
T Consensus 120 ~e~~~gg~L~~~l~-----~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~ 191 (350)
T 1rdq_E 120 MEYVAGGEMFSHLR-----RIGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191 (350)
T ss_dssp EECCTTCBHHHHHH-----HHCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EcCCCCCcHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceec
Confidence 99999999999984 3356899999999999999999999999 999999999999999999999999999865
Q ss_pred cCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcC
Q 041031 162 EHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFND 241 (313)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (313)
... .....+|+.|+|||++.+..++.++|||||||++|+|++|..||......
T Consensus 192 ~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--------------------- 244 (350)
T 1rdq_E 192 KGR------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI--------------------- 244 (350)
T ss_dssp SSC------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---------------------
T ss_pred cCC------cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH---------------------
Confidence 432 22346899999999999999999999999999999999999999754321
Q ss_pred cHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCC-----HHHHHHH
Q 041031 242 TKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPD-----MSNAAIR 292 (313)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps-----~~~ll~~ 292 (313)
+....+... .. ......+..+.+|+.+||+.||.+||+ +++|++.
T Consensus 245 --~~~~~i~~~---~~-~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 245 --QIYEKIVSG---KV-RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp --HHHHHHHHC---CC-CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred --HHHHHHHcC---CC-CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 111112111 11 112334567889999999999999998 7888753
No 111
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.4e-45 Score=325.14 Aligned_cols=204 Identities=27% Similarity=0.388 Sum_probs=176.2
Q ss_pred cChHHHHHHhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc--cHHHHHHHHHHHhc------CCCceeeeeE
Q 041031 2 FSYNEVRDATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK--SKEFSSELKILCKV------HSNLIELIGY 71 (313)
Q Consensus 2 ~~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~--~~~~~~e~~~l~~l------h~~i~~~~~~ 71 (313)
|+++.-....++|.+.++||+|+||.||+|++. ++.||||++.... ......|+.+++.+ ||||++++++
T Consensus 25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~ 104 (360)
T 3llt_A 25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGK 104 (360)
T ss_dssp CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEE
T ss_pred eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccce
Confidence 444455556789999999999999999999995 7889999997543 44567789999887 8999999999
Q ss_pred EEeCCeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCC-----
Q 041031 72 AAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDS----- 146 (313)
Q Consensus 72 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~----- 146 (313)
+...+..++|||++ +++|.+++... ....+++..++.++.|++.||+|||+++ ++|+||||+||+++.
T Consensus 105 ~~~~~~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~ 177 (360)
T 3llt_A 105 FMYYDHMCLIFEPL-GPSLYEIITRN---NYNGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPYFEK 177 (360)
T ss_dssp EEETTEEEEEECCC-CCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCTTCCE
T ss_pred eeECCeeEEEEcCC-CCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEccccccc
Confidence 99999999999999 88999998522 2345899999999999999999999999 999999999999975
Q ss_pred --------------------CCcEEEeeccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHH
Q 041031 147 --------------------NFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLME 206 (313)
Q Consensus 147 --------------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~ 206 (313)
++.++|+|||++...... .....+|+.|+|||++.+..++.++|||||||++|+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 251 (360)
T 3llt_A 178 SLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY------HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAE 251 (360)
T ss_dssp EEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC------CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred cccchhcccccccccccccCCCCEEEEeccCceecCCC------CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHH
Confidence 788999999999764432 223468999999999999999999999999999999
Q ss_pred HHhCCCCccCCC
Q 041031 207 LITGQQALSRDA 218 (313)
Q Consensus 207 ~~tg~~p~~~~~ 218 (313)
|++|..||....
T Consensus 252 ll~g~~pf~~~~ 263 (360)
T 3llt_A 252 LYTGSLLFRTHE 263 (360)
T ss_dssp HHHSSCSCCCSS
T ss_pred HHHCCCCCCCCc
Confidence 999999997644
No 112
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1e-44 Score=309.17 Aligned_cols=251 Identities=20% Similarity=0.319 Sum_probs=204.3
Q ss_pred HhcCccccceeccCCeEEEEEeEECCcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEeC--CeEEEE
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAGG--DSLFLV 81 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~--~~~~lv 81 (313)
..++|.+.+.||+|+||.||+|.+.++.+|||++.... .+.+.+|+.+++.+ ||||+++++++.+. ...++|
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 8 DFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred CHHHhHHHHHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 35789999999999999999999999999999987543 34578899999999 99999999999877 788999
Q ss_pred EeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccc
Q 041031 82 YEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL 161 (313)
Q Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~ 161 (313)
|||+++++|.+++... ....+++..++.++.|++.||+|||+.+.. ++|+||||+||+++.++.+++.|||.....
T Consensus 88 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~-i~H~dikp~Nil~~~~~~~~l~~~~~~~~~ 163 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEG---TNFVVDQSQAVKFALDMARGMAFLHTLEPL-IPRHALNSRSVMIDEDMTARISMADVKFSF 163 (271)
T ss_dssp EECCTTCBHHHHHHSC---SSCCCCHHHHHHHHHHHHHHHHHHTTSSSC-CTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred ecccCCCcHHHHHhhc---ccCCCCHHHHHHHHHHHHHHHHHHhcCCCc-eecCCCccceEEEcCCcceeEEeccceeee
Confidence 9999999999999532 223589999999999999999999997633 899999999999999999999988876543
Q ss_pred cCChhhhhhcccccccccccCCccccCCCCCC---ccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHH
Q 041031 162 EHSPEIAAAASRIVGTFGYLAPEYVRDGCVTT---KSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238 (313)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~---~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (313)
... ...+|+.|+|||++.+..++. ++||||||+++|+|++|..||...... .
T Consensus 164 ~~~--------~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------------~----- 218 (271)
T 3kmu_A 164 QSP--------GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNM------------E----- 218 (271)
T ss_dssp SCT--------TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHH------------H-----
T ss_pred ccc--------CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChH------------H-----
Confidence 321 235789999999998766555 799999999999999999999654321 0
Q ss_pred hcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHH
Q 041031 239 FNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHIL 297 (313)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~ 297 (313)
...........+. .....+..+.+++.+||+.||.+|||+.++++.|+++.
T Consensus 219 -----~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 219 -----IGMKVALEGLRPT---IPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp -----HHHHHHHSCCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred -----HHHHHHhcCCCCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 0011111111121 23345667899999999999999999999999999875
No 113
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=8.9e-47 Score=327.22 Aligned_cols=263 Identities=26% Similarity=0.410 Sum_probs=194.1
Q ss_pred hcCccccceeccCCeEEEEEeEECCcceEEEeccccccHHHHHHHHHHHh--c-CCCceeeeeEEEeCC----eEEEEEe
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCK--V-HSNLIELIGYAAGGD----SLFLVYE 83 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~aiK~~~~~~~~~~~~e~~~l~~--l-h~~i~~~~~~~~~~~----~~~lv~e 83 (313)
.++|.+.+.||+|+||.||+|++.++.||||++.......+.+|.+++.. + ||||+++++++.... ..++|||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e 81 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CTTSCEEEEECC-TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEcCcceEEEEecccchhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEe
Confidence 47899999999999999999999999999999998888888889999988 5 999999999998776 7899999
Q ss_pred ecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHh--------cCCCCceEEeccCCCCeeeCCCCcEEEeec
Q 041031 84 YAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIH--------QYTKPYYVHRDVKTSNILLDSNFRAKIADF 155 (313)
Q Consensus 84 ~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh--------~~~~~~i~h~di~p~nil~~~~~~~~l~df 155 (313)
|+++|+|.+++. ...+++..++.++.|++.||+||| +.+ ++|+||||+||+++.++.+||+||
T Consensus 82 ~~~~g~L~~~l~------~~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nil~~~~~~~kl~DF 152 (303)
T 3gxj_A 82 YHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp CCTTCCHHHHHH------HCCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCC
T ss_pred ccCCCCHHHHHh------ccCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC---EeeCcCCHHHeEECCCCCEEEeec
Confidence 999999999984 235778888999999999999999 888 999999999999999999999999
Q ss_pred cccccccCChhhh-hhcccccccccccCCccccCC------CCCCccchhhHHHHHHHHHhC----------CCCccCCC
Q 041031 156 GLVKLLEHSPEIA-AAASRIVGTFGYLAPEYVRDG------CVTTKSDVYAFGVVLMELITG----------QQALSRDA 218 (313)
Q Consensus 156 g~~~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~------~~~~~~DiwslG~~l~~~~tg----------~~p~~~~~ 218 (313)
|++.......... .......+|+.|+|||++.+. .++.++||||||+++|+|++| ..||....
T Consensus 153 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~ 232 (303)
T 3gxj_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp CC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTC
T ss_pred CcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccC
Confidence 9987655432211 112234689999999999876 344689999999999999999 55554332
Q ss_pred CCCCCccccchhHHHHHHHHhcCcHHHHH-HhhhhcCCCCCC--CCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHH
Q 041031 219 NPGNNQYTEHRSLVDYMLAVFNDTKDFMA-KLTECLDPNLTR--YHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSH 295 (313)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~--~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~ 295 (313)
....... +... .......+.... ........+.+|+.+||+.||.+|||+.++++.|++
T Consensus 233 ~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 294 (303)
T 3gxj_A 233 PSDPSVE------------------EMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294 (303)
T ss_dssp C-CCCCC-------------------CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC
T ss_pred CCCccHH------------------HHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHH
Confidence 2110000 0011 111222232222 233666789999999999999999999999999998
Q ss_pred HHhcc
Q 041031 296 ILISS 300 (313)
Q Consensus 296 ~~~~~ 300 (313)
+....
T Consensus 295 l~~~~ 299 (303)
T 3gxj_A 295 LSQQE 299 (303)
T ss_dssp -CCC-
T ss_pred hhhhc
Confidence 87543
No 114
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.2e-44 Score=319.30 Aligned_cols=265 Identities=27% Similarity=0.425 Sum_probs=212.9
Q ss_pred HHHhcCccccceeccCCeEEEEEeEECCcceEEEeccccccHHHHHHHHHHHh--c-CCCceeeeeEEEeCC----eEEE
Q 041031 8 RDATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCK--V-HSNLIELIGYAAGGD----SLFL 80 (313)
Q Consensus 8 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~aiK~~~~~~~~~~~~e~~~l~~--l-h~~i~~~~~~~~~~~----~~~l 80 (313)
....++|.+.+.||+|+||.||+|.+.++.||||++.......+.+|.++++. + ||||+++++++.... ..++
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~l 117 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 117 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEE
T ss_pred ccccccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCchhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEE
Confidence 44568999999999999999999999999999999988877788899999988 5 999999999998776 7899
Q ss_pred EEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHh--------cCCCCceEEeccCCCCeeeCCCCcEEE
Q 041031 81 VYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIH--------QYTKPYYVHRDVKTSNILLDSNFRAKI 152 (313)
Q Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh--------~~~~~~i~h~di~p~nil~~~~~~~~l 152 (313)
||||+++++|.+++. ...+++..++.++.|++.||.||| +.+ ++|+||||+||+++.++.++|
T Consensus 118 v~e~~~~g~L~~~l~------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NIll~~~~~~kL 188 (342)
T 1b6c_B 118 VSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCI 188 (342)
T ss_dssp EECCCTTCBHHHHHH------HCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGEEECTTSCEEE
T ss_pred EEeecCCCcHHHHHh------ccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHEEECCCCCEEE
Confidence 999999999999994 235899999999999999999999 888 999999999999999999999
Q ss_pred eeccccccccCChhhh-hhcccccccccccCCccccCCC------CCCccchhhHHHHHHHHHhC----------CCCcc
Q 041031 153 ADFGLVKLLEHSPEIA-AAASRIVGTFGYLAPEYVRDGC------VTTKSDVYAFGVVLMELITG----------QQALS 215 (313)
Q Consensus 153 ~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~------~~~~~DiwslG~~l~~~~tg----------~~p~~ 215 (313)
+|||++.......... .......+++.|+|||++.+.. ++.++||||||+++|+|++| ..||.
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~ 268 (342)
T 1b6c_B 189 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 268 (342)
T ss_dssp CCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred EECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCcc
Confidence 9999987655432211 1223346899999999998652 34689999999999999999 66765
Q ss_pred CCCCCCCCccccchhHHHHHHHHhcCcHHHHHHh-hhhcCCCCCC--CCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 216 RDANPGNNQYTEHRSLVDYMLAVFNDTKDFMAKL-TECLDPNLTR--YHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~--~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
...... .... .....+ .....+.... ........+.+|+.+||+.||.+|||+.+|++.
T Consensus 269 ~~~~~~-------~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 330 (342)
T 1b6c_B 269 DLVPSD-------PSVE-----------EMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 330 (342)
T ss_dssp TTSCSS-------CCHH-----------HHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred ccCcCc-------ccHH-----------HHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 443221 0111 111111 1122232222 234667789999999999999999999999999
Q ss_pred HHHHHhc
Q 041031 293 LSHILIS 299 (313)
Q Consensus 293 l~~~~~~ 299 (313)
|+++...
T Consensus 331 L~~i~~~ 337 (342)
T 1b6c_B 331 LSQLSQQ 337 (342)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 9998765
No 115
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-44 Score=314.68 Aligned_cols=264 Identities=24% Similarity=0.320 Sum_probs=197.1
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc--------cHHHHHHHHHHHhc----CCCceeeeeEEEeC
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK--------SKEFSSELKILCKV----HSNLIELIGYAAGG 75 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~--------~~~~~~e~~~l~~l----h~~i~~~~~~~~~~ 75 (313)
..++|++.++||+|+||.||+|.+. ++.||||.+.... .....+|+.+++.+ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 4689999999999999999999976 7889999986432 34577788887776 99999999999876
Q ss_pred C-----eEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcE
Q 041031 76 D-----SLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRA 150 (313)
Q Consensus 76 ~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~ 150 (313)
. ..+++||++. ++|.+++... ....+++..++.++.|++.||+|||+++ ++|+||||+||+++.++.+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~ 159 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKA---PPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTV 159 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTC---CTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhc---cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCE
Confidence 5 5899999996 5999998532 2234899999999999999999999999 9999999999999999999
Q ss_pred EEeeccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchh
Q 041031 151 KIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRS 230 (313)
Q Consensus 151 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~ 230 (313)
+|+|||++....... ......+|+.|+|||++.+..++.++|||||||++|+|++|..||.+.... ..
T Consensus 160 kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--------~~ 227 (308)
T 3g33_A 160 KLADFGLARIYSYQM----ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA--------DQ 227 (308)
T ss_dssp EECSCSCTTTSTTCC----CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH--------HH
T ss_pred EEeeCccccccCCCc----ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH--------HH
Confidence 999999987654322 223346899999999999999999999999999999999999999765431 11
Q ss_pred HHHHHHHHhcCcH-HHH---HHhhhhcCCCCC----CCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 231 LVDYMLAVFNDTK-DFM---AKLTECLDPNLT----RYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 231 ~~~~~~~~~~~~~-~~~---~~l~~~~~~~~~----~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
+............ .+. ........+... ......+..+.+|+.+||+.||.+|||+.|+++.
T Consensus 228 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 228 LGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp HHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 1111100000000 000 000000000000 0112345678899999999999999999999864
No 116
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1e-44 Score=313.86 Aligned_cols=259 Identities=25% Similarity=0.379 Sum_probs=204.6
Q ss_pred HhcCccccceeccCCeEEEEEeEECC-----cceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEE-EeCCeE
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLRG-----KNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYA-AGGDSL 78 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~~-----~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~-~~~~~~ 78 (313)
...+|++.+.||+|+||.||+|.+.. ..+|+|.+.... .+.+.+|+.+++.+ ||||+++++++ ...+..
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 102 (298)
T 3f66_A 23 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP 102 (298)
T ss_dssp GGEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred cceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCce
Confidence 34568899999999999999998752 248999887543 34577899999999 99999999985 456678
Q ss_pred EEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccc
Q 041031 79 FLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLV 158 (313)
Q Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~ 158 (313)
+++|||+++++|.+++. .....++...++.++.|++.||+|||+++ ++|+||||+||+++.++.++|+|||++
T Consensus 103 ~~v~e~~~~~~L~~~l~----~~~~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a 175 (298)
T 3f66_A 103 LVVLPYMKHGDLRNFIR----NETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLA 175 (298)
T ss_dssp EEEEECCTTCBHHHHHH----CTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGG
T ss_pred EEEEeCCCCCCHHHHHH----hcccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECccccc
Confidence 99999999999999995 34466899999999999999999999999 999999999999999999999999999
Q ss_pred ccccCChhhh-hhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchhHHHHHH
Q 041031 159 KLLEHSPEIA-AAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLVDYML 236 (313)
Q Consensus 159 ~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 236 (313)
.......... .......+++.|+|||++.+..++.++||||||+++|+|++ |.+||......
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~---------------- 239 (298)
T 3f66_A 176 RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF---------------- 239 (298)
T ss_dssp CCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT----------------
T ss_pred ccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH----------------
Confidence 8665432211 12223456788999999999999999999999999999999 55666544432
Q ss_pred HHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhccc
Q 041031 237 AVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSK 301 (313)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~ 301 (313)
+....+...... ......+..+.+++.+||+.||.+|||+.++++.|+.+...-.
T Consensus 240 -------~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 240 -------DITVYLLQGRRL---LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp -------THHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred -------HHHHHHhcCCCC---CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 111111111111 1122345678899999999999999999999999999987644
No 117
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2.9e-44 Score=323.35 Aligned_cols=254 Identities=17% Similarity=0.253 Sum_probs=195.0
Q ss_pred HhcCcccc-ceeccCCeEEEEEeEEC--CcceEEEeccccccHHHHHHHHHHHhc--CCCceeeeeEEEe----CCeEEE
Q 041031 10 ATSNFSTS-LKIGQGSYGSVYLGKLR--GKNAAIKQMKNTKSKEFSSELKILCKV--HSNLIELIGYAAG----GDSLFL 80 (313)
Q Consensus 10 ~~~~y~~~-~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~~~~~~~e~~~l~~l--h~~i~~~~~~~~~----~~~~~l 80 (313)
..++|.+. +.||+|+||.||+|.+. ++.||||++.. .....+|+.++.++ ||||+++++++.. ...+++
T Consensus 59 ~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~--~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~l 136 (400)
T 1nxk_A 59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 136 (400)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC--SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred ccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc--chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEE
Confidence 45678776 78999999999999987 78899999864 35677889888665 9999999999875 567899
Q ss_pred EEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCC---CCcEEEeeccc
Q 041031 81 VYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDS---NFRAKIADFGL 157 (313)
Q Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~---~~~~~l~dfg~ 157 (313)
||||+.+|+|.+++... ....+++..++.++.|++.||.|||+.+ |+|+||||+||+++. ++.+||+|||+
T Consensus 137 v~E~~~gg~L~~~l~~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG~ 210 (400)
T 1nxk_A 137 VMECLDGGELFSRIQDR---GDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGF 210 (400)
T ss_dssp EEECCCSEEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred EEEeCCCCcHHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEeccc
Confidence 99999999999999522 2346899999999999999999999999 999999999999987 78899999999
Q ss_pred cccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHH
Q 041031 158 VKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLA 237 (313)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 237 (313)
+....... ......+|+.|+|||++.+..++.++|||||||++|+|++|..||..........
T Consensus 211 a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~------------- 273 (400)
T 1nxk_A 211 AKETTSHN----SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP------------- 273 (400)
T ss_dssp CEECC---------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCC-------------
T ss_pred ccccCCCC----ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccH-------------
Confidence 98655322 2223467999999999999999999999999999999999999997654421100
Q ss_pred HhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 041031 238 VFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLS 294 (313)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~ 294 (313)
.....+...............+..+.+|+++||..||.+|||+.++++.-+
T Consensus 274 ------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~ 324 (400)
T 1nxk_A 274 ------GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW 324 (400)
T ss_dssp ------SHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred ------HHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence 001111110000000112334567889999999999999999999997644
No 118
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=5.6e-45 Score=325.04 Aligned_cols=241 Identities=24% Similarity=0.327 Sum_probs=193.2
Q ss_pred cceeccCCeEEEEEeEEC--CcceEEEeccccc---cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEeecCCCCh
Q 041031 17 SLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK---SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYEYAQNGAL 90 (313)
Q Consensus 17 ~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~---~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 90 (313)
.+.||+|+||.||+|.+. ++.||+|++.... .+.+.+|+.+++.+ ||||+++++++.+.+..++||||+++++|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 678999999999999986 7899999997643 45688999999999 99999999999999999999999999999
Q ss_pred hhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeee--CCCCcEEEeeccccccccCChhhh
Q 041031 91 SDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILL--DSNFRAKIADFGLVKLLEHSPEIA 168 (313)
Q Consensus 91 ~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~--~~~~~~~l~dfg~~~~~~~~~~~~ 168 (313)
.+++. .....+++..++.++.|++.||.|||+.+ ++|+||||+||++ +.++.++|+|||++.......
T Consensus 174 ~~~l~----~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~--- 243 (373)
T 2x4f_A 174 FDRII----DESYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE--- 243 (373)
T ss_dssp HHHHH----HTGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC---
T ss_pred HHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc---
Confidence 99884 33456899999999999999999999999 9999999999999 567889999999998765432
Q ss_pred hhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcCcHHHHHH
Q 041031 169 AAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDFMAK 248 (313)
Q Consensus 169 ~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (313)
......+|+.|+|||++.+..++.++|||||||++|+|++|..||.+.... +....
T Consensus 244 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-----------------------~~~~~ 299 (373)
T 2x4f_A 244 -KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA-----------------------ETLNN 299 (373)
T ss_dssp -BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH-----------------------HHHHH
T ss_pred -ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-----------------------HHHHH
Confidence 222346899999999999999999999999999999999999999755421 11111
Q ss_pred hhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 041031 249 LTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAI 291 (313)
Q Consensus 249 l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 291 (313)
+...............+..+.+|+.+||+.||.+|||+.|+++
T Consensus 300 i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 300 ILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp HHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1111111011112234567899999999999999999999997
No 119
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=5.9e-45 Score=311.80 Aligned_cols=242 Identities=24% Similarity=0.351 Sum_probs=180.7
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc------cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK------SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLV 81 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~------~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv 81 (313)
.++|++.+.||+|+||.||+|.+. ++.||+|++.... ...+.+|+.+++.+ ||||+++++++.+.+..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 468999999999999999999876 7899999986532 44578999999999 99999999999999999999
Q ss_pred EeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccc
Q 041031 82 YEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL 161 (313)
Q Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~ 161 (313)
|||+ +++|.+.+. ....+++..++.++.|++.||+|||+++ ++|+||+|+||++++++.++|+|||.+...
T Consensus 92 ~e~~-~~~l~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 162 (275)
T 2eue_A 92 IEYA-GNELFDYIV-----QRDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIM 162 (275)
T ss_dssp EECC-CEEHHHHHH-----TSSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCSSCC---
T ss_pred ehhc-CCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCChHhEEECCCCCEEEeecccceec
Confidence 9999 678888873 3456999999999999999999999999 999999999999999999999999998765
Q ss_pred cCChhhhhhcccccccccccCCccccCCCC-CCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhc
Q 041031 162 EHSPEIAAAASRIVGTFGYLAPEYVRDGCV-TTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240 (313)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (313)
..... .....+++.|+|||++.+..+ +.++||||||+++|+|++|+.||......
T Consensus 163 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------------------- 218 (275)
T 2eue_A 163 TDGNF----LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP-------------------- 218 (275)
T ss_dssp ----------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHH--------------------
T ss_pred cCccc----ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH--------------------
Confidence 43321 223458999999999987765 78999999999999999999999654321
Q ss_pred CcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 241 DTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
.....+..... ......+..+.+|+++||+.||.+|||+.|+++.
T Consensus 219 ---~~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 219 ---VLFKNISNGVY----TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ---HHHHHHHHTCC----CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ---HHHHHHHhCCC----CCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 11111211111 1122345678899999999999999999999864
No 120
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=6.5e-45 Score=312.19 Aligned_cols=245 Identities=24% Similarity=0.402 Sum_probs=201.4
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc------cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEE
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK------SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFL 80 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~------~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~l 80 (313)
..++|++.+.||+|+||.||+|.+. +..+|+|.+.... ...+.+|+.+++.+ ||||+++++++.+....++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 4678999999999999999999988 6679999986432 44578899999999 9999999999999999999
Q ss_pred EEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccccc
Q 041031 81 VYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKL 160 (313)
Q Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~ 160 (313)
||||+++++|.+++. ....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..
T Consensus 87 v~e~~~~~~l~~~l~-----~~~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~ 158 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQ-----KLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVH 158 (279)
T ss_dssp EECCCTTEEHHHHHH-----HHSSCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESC
T ss_pred EEecCCCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEecccccc
Confidence 999999999999984 3456899999999999999999999999 99999999999999999999999998865
Q ss_pred ccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhc
Q 041031 161 LEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240 (313)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (313)
.... ......+++.|+|||++.+..++.++||||||+++|+|++|..||......
T Consensus 159 ~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------------------- 213 (279)
T 3fdn_A 159 APSS-----RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ-------------------- 213 (279)
T ss_dssp C-------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--------------------
T ss_pred CCcc-----cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH--------------------
Confidence 4432 222346899999999999999999999999999999999999999754321
Q ss_pred CcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 041031 241 DTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLS 294 (313)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~ 294 (313)
+....+... ... .....+..+.+|+.+||+.||.+|||+.|+++.-.
T Consensus 214 ---~~~~~~~~~-~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~ 260 (279)
T 3fdn_A 214 ---ETYKRISRV-EFT---FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 260 (279)
T ss_dssp ---HHHHHHHHT-CCC---CCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHH
T ss_pred ---HHHHHHHhC-CCC---CCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCcc
Confidence 111111111 111 12234457889999999999999999999998654
No 121
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.4e-44 Score=317.13 Aligned_cols=256 Identities=21% Similarity=0.308 Sum_probs=206.5
Q ss_pred hHHHHHHhcCcccc-ceeccCCeEEEEEeEEC--CcceEEEeccccc-----cHHHHHHHHHHHhc--CCCceeeeeEEE
Q 041031 4 YNEVRDATSNFSTS-LKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK-----SKEFSSELKILCKV--HSNLIELIGYAA 73 (313)
Q Consensus 4 ~~~~~~~~~~y~~~-~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~-----~~~~~~e~~~l~~l--h~~i~~~~~~~~ 73 (313)
++..+...+.|.+. +.||+|+||.||+|.+. ++.||+|++.... ...+.+|+.+++.+ ||||+++++++.
T Consensus 20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~ 99 (327)
T 3lm5_A 20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE 99 (327)
T ss_dssp SBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred HHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE
Confidence 34566777888888 89999999999999988 8899999987532 45688999999999 799999999999
Q ss_pred eCCeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCC---CCcE
Q 041031 74 GGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDS---NFRA 150 (313)
Q Consensus 74 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~---~~~~ 150 (313)
+.+..++||||+.+++|.+++.. .....+++..++.++.|++.||+|||+++ ++|+||||+||+++. ++.+
T Consensus 100 ~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~~~~~ 173 (327)
T 3lm5_A 100 NTSEIILILEYAAGGEIFSLCLP---ELAEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDI 173 (327)
T ss_dssp CSSEEEEEEECCTTEEGGGGGSS---CC-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTTBCCE
T ss_pred eCCeEEEEEEecCCCcHHHHHHH---hcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCCCCcE
Confidence 99999999999999999999842 22367899999999999999999999999 999999999999987 7899
Q ss_pred EEeeccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchh
Q 041031 151 KIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRS 230 (313)
Q Consensus 151 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~ 230 (313)
+|+|||++........ .....+++.|+|||++.+..++.++||||||+++|+|++|..||......
T Consensus 174 kL~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---------- 239 (327)
T 3lm5_A 174 KIVDFGMSRKIGHACE----LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ---------- 239 (327)
T ss_dssp EECCGGGCEEC-------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----------
T ss_pred EEeeCccccccCCccc----cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch----------
Confidence 9999999987654322 22346899999999999999999999999999999999999999654321
Q ss_pred HHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 231 LVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
+....+...............+..+.+|+.+||+.||.+|||+.++++.
T Consensus 240 -------------~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 240 -------------ETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp -------------HHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred -------------HHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 1111122111111112334456678899999999999999999999865
No 122
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=7.5e-45 Score=311.41 Aligned_cols=247 Identities=22% Similarity=0.329 Sum_probs=201.6
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEecccc---ccHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEe
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT---KSKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYE 83 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~---~~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e 83 (313)
..++|++.+.||+|+||.||+|.+. +..+|+|.+... ..+.+.+|+++++.+ ||||+++++++.+.+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 5678999999999999999999988 567899988653 356688999999999 9999999999999999999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeee---CCCCcEEEeecccccc
Q 041031 84 YAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILL---DSNFRAKIADFGLVKL 160 (313)
Q Consensus 84 ~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~---~~~~~~~l~dfg~~~~ 160 (313)
|+++++|.+++. ....+++..++.++.|++.||.|||+++ ++|+||+|+||++ +.++.++|+|||.+..
T Consensus 87 ~~~~~~L~~~~~-----~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~ 158 (277)
T 3f3z_A 87 LCTGGELFERVV-----HKRVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 158 (277)
T ss_dssp CCCSCBHHHHHH-----HHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred ccCCCcHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEeccccee
Confidence 999999999884 3456899999999999999999999999 9999999999999 7788999999999886
Q ss_pred ccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhc
Q 041031 161 LEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240 (313)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (313)
..... ......+++.|+|||++.+. ++.++||||||+++|+|++|..||......
T Consensus 159 ~~~~~----~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------------------- 213 (277)
T 3f3z_A 159 FKPGK----MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDS-------------------- 213 (277)
T ss_dssp CCTTS----CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--------------------
T ss_pred ccCcc----chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHH--------------------
Confidence 55432 22334689999999998765 899999999999999999999999754321
Q ss_pred CcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 241 DTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
+....+...............+..+.+++.+||+.||.+|||+.++++.
T Consensus 214 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 214 ---EVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp ---HHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ---HHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1111111111000000011345678899999999999999999999864
No 123
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.1e-44 Score=325.19 Aligned_cols=277 Identities=18% Similarity=0.246 Sum_probs=202.3
Q ss_pred HhcCccccceeccC--CeEEEEEeEEC--CcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEE
Q 041031 10 ATSNFSTSLKIGQG--SYGSVYLGKLR--GKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLF 79 (313)
Q Consensus 10 ~~~~y~~~~~lg~g--~~g~v~~~~~~--~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~ 79 (313)
..++|++.++||+| +||.||+|++. ++.||||++.... ...+.+|+.+++.+ ||||+++++++.+.+..+
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 46789999999999 99999999997 8899999987543 34577899999999 999999999999999999
Q ss_pred EEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccc
Q 041031 80 LVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVK 159 (313)
Q Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~ 159 (313)
+||||+++++|.+++... ....+++..++.++.|++.||+|||+++ |+|+||||+||+++.++.++|+|||.+.
T Consensus 103 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~ 176 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTH---FMDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNL 176 (389)
T ss_dssp EEEECCTTCBHHHHHHHT---CTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCE
T ss_pred EEEEccCCCCHHHHHhhh---cccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccccce
Confidence 999999999999998532 2356899999999999999999999999 9999999999999999999999999876
Q ss_pred cccCChhhh----hhcccccccccccCCccccC--CCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHH
Q 041031 160 LLEHSPEIA----AAASRIVGTFGYLAPEYVRD--GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVD 233 (313)
Q Consensus 160 ~~~~~~~~~----~~~~~~~~~~~~~aPE~~~~--~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~ 233 (313)
......... .......+++.|+|||++.+ ..++.++|||||||++|+|++|..||.+.................
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 256 (389)
T 3gni_B 177 SMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPC 256 (389)
T ss_dssp ECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-------
T ss_pred eeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCc
Confidence 543221111 11222467889999999987 678999999999999999999999997654432110000000000
Q ss_pred HHHHHhcCcHHH-------------HHHhhh------hcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 234 YMLAVFNDTKDF-------------MAKLTE------CLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 234 ~~~~~~~~~~~~-------------~~~l~~------~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
............ ...+.. .............+..+.+|+++||+.||++|||+.|+++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 257 LLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp -------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 000000000000 000000 00000001223345678999999999999999999999864
No 124
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=9.3e-45 Score=311.70 Aligned_cols=253 Identities=23% Similarity=0.374 Sum_probs=202.9
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc---------cHHHHHHHHHHHhc-CCCceeeeeEEEeCCe
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK---------SKEFSSELKILCKV-HSNLIELIGYAAGGDS 77 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~---------~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~ 77 (313)
+.++|++.+.||+|+||.||+|.+. ++.+|+|.+.... .+.+.+|+.+++.+ ||||+++++++.+.+.
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 82 (283)
T 3bhy_A 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTD 82 (283)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCe
Confidence 3468999999999999999999997 7899999886432 45688999999999 9999999999999999
Q ss_pred EEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCC----cEEEe
Q 041031 78 LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF----RAKIA 153 (313)
Q Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~----~~~l~ 153 (313)
.++|||++++++|.+++. ....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++ .++|+
T Consensus 83 ~~lv~e~~~~~~L~~~l~-----~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~ 154 (283)
T 3bhy_A 83 VVLILELVSGGELFDFLA-----EKESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLI 154 (283)
T ss_dssp EEEEEECCCSCBHHHHHH-----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEEC
T ss_pred EEEEEeecCCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEE
Confidence 999999999999999984 3456899999999999999999999999 99999999999998876 89999
Q ss_pred eccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHH
Q 041031 154 DFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVD 233 (313)
Q Consensus 154 dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~ 233 (313)
|||.+........ .....+++.|+|||++.+..++.++||||||+++|+|++|..||......
T Consensus 155 dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------------- 217 (283)
T 3bhy_A 155 DFGIAHKIEAGNE----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ------------- 217 (283)
T ss_dssp CCTTCEECC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-------------
T ss_pred ecccceeccCCCc----ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH-------------
Confidence 9999886654321 22346899999999999999999999999999999999999999654321
Q ss_pred HHHHHhcCcHHHHHHhhhhcCCCCCC-CCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH--HHHHHh
Q 041031 234 YMLAVFNDTKDFMAKLTECLDPNLTR-YHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR--LSHILI 298 (313)
Q Consensus 234 ~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~--l~~~~~ 298 (313)
+....+.... ..... .....+..+.+++.+||+.||.+|||+.++++. ++.+..
T Consensus 218 ----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 274 (283)
T 3bhy_A 218 ----------ETLTNISAVN-YDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR 274 (283)
T ss_dssp ----------HHHHHHHTTC-CCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHH
T ss_pred ----------HHHHHhHhcc-cCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHH
Confidence 1111111110 00000 112234578899999999999999999999973 444443
No 125
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=7.6e-45 Score=320.51 Aligned_cols=255 Identities=22% Similarity=0.293 Sum_probs=203.7
Q ss_pred HHhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccccHHHHHHHHHHHhc--CCCceeeeeEEEeCCeEEEEEee
Q 041031 9 DATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTKSKEFSSELKILCKV--HSNLIELIGYAAGGDSLFLVYEY 84 (313)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~~~~~~~e~~~l~~l--h~~i~~~~~~~~~~~~~~lv~e~ 84 (313)
...++|++.+.||+|+||.||+|.++ ++.||||++..... ...+|++++..+ ||||+++++++.+.+..++||||
T Consensus 19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~ 97 (342)
T 2qr7_A 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL 97 (342)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred CccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeC
Confidence 34678999999999999999999987 78899999976543 345688888887 99999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCC----CcEEEeecccccc
Q 041031 85 AQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSN----FRAKIADFGLVKL 160 (313)
Q Consensus 85 ~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~----~~~~l~dfg~~~~ 160 (313)
+++|+|.+.+. ....+++..++.++.|++.||.|||+++ ++|+||||+||++.++ +.+||+|||++..
T Consensus 98 ~~gg~L~~~i~-----~~~~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~ 169 (342)
T 2qr7_A 98 MKGGELLDKIL-----RQKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQ 169 (342)
T ss_dssp CCSCBHHHHHH-----TCTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTTCEE
T ss_pred CCCCcHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCCccc
Confidence 99999999984 4467999999999999999999999999 9999999999998543 3599999999986
Q ss_pred ccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhc
Q 041031 161 LEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240 (313)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (313)
...... ......+|+.|+|||++.+..++.++|||||||++|+|++|..||....... ..
T Consensus 170 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~---------~~-------- 229 (342)
T 2qr7_A 170 LRAENG---LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT---------PE-------- 229 (342)
T ss_dssp CBCTTC---CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC---------HH--------
T ss_pred CcCCCC---ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC---------HH--------
Confidence 554321 2233468999999999998889999999999999999999999997543210 00
Q ss_pred CcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHH
Q 041031 241 DTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSH 295 (313)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~ 295 (313)
+....+....-..........+..+.+|+++||..||.+|||+.++++.-+-
T Consensus 230 ---~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~ 281 (342)
T 2qr7_A 230 ---EILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281 (342)
T ss_dssp ---HHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHH
T ss_pred ---HHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCee
Confidence 1112221111111111223456678899999999999999999999976543
No 126
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.1e-45 Score=318.35 Aligned_cols=255 Identities=24% Similarity=0.382 Sum_probs=200.8
Q ss_pred hcCccccceeccCCeEEEEEeEEC--Ccc----eEEEecccc----ccHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKN----AAIKQMKNT----KSKEFSSELKILCKV-HSNLIELIGYAAGGDSLF 79 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~----~aiK~~~~~----~~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~ 79 (313)
.++|++.+.||+|+||.||+|.+. ++. +++|.+... ....+.+|+.+++.+ ||||+++++++.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 478999999999999999999986 444 477766432 355688999999999 999999999998765 78
Q ss_pred EEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccc
Q 041031 80 LVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVK 159 (313)
Q Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~ 159 (313)
++++++.+++|.+++. .....+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.++|+|||++.
T Consensus 93 ~v~~~~~~g~L~~~l~----~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~ 165 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVR----EHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAK 165 (327)
T ss_dssp EEECCCSSCBHHHHHH----HTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred EEEEecCCCcHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCccee
Confidence 8999999999999985 33466899999999999999999999999 9999999999999999999999999998
Q ss_pred cccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchhHHHHHHHH
Q 041031 160 LLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLVDYMLAV 238 (313)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (313)
........ .......+++.|+|||++.+..++.++||||||+++|+|++ |..||......
T Consensus 166 ~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~------------------ 226 (327)
T 3lzb_A 166 LLGAEEKE-YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS------------------ 226 (327)
T ss_dssp ---------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG------------------
T ss_pred EccCcccc-ccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH------------------
Confidence 76543221 12223356788999999999999999999999999999999 99999765432
Q ss_pred hcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcc
Q 041031 239 FNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISS 300 (313)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 300 (313)
+....+...... ......+..+.+++++||+.||.+|||+.++++.|+++....
T Consensus 227 -----~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 280 (327)
T 3lzb_A 227 -----EISSILEKGERL---PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp -----GHHHHHHTTCCC---CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred -----HHHHHHHcCCCC---CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence 112222221111 123345567889999999999999999999999999998653
No 127
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.1e-44 Score=318.63 Aligned_cols=263 Identities=24% Similarity=0.417 Sum_probs=211.2
Q ss_pred HhcCccccceeccCCeEEEEEeEEC---------CcceEEEeccccc----cHHHHHHHHHHHhc--CCCceeeeeEEEe
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR---------GKNAAIKQMKNTK----SKEFSSELKILCKV--HSNLIELIGYAAG 74 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~---------~~~~aiK~~~~~~----~~~~~~e~~~l~~l--h~~i~~~~~~~~~ 74 (313)
..++|.+.+.||+|+||.||+|++. +..||||++.... ...+.+|+.+++.+ ||||+++++++.+
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 3578999999999999999999874 4579999997653 34577899999998 9999999999999
Q ss_pred CCeEEEEEeecCCCChhhhhcCCCCC-----------CCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCee
Q 041031 75 GDSLFLVYEYAQNGALSDHLHWPSVK-----------GKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNIL 143 (313)
Q Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~~~~~-----------~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil 143 (313)
.+..++||||+++++|.+++...... ....+++..++.++.|++.||.|||+.+ ++|+||||+||+
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEE
Confidence 99999999999999999999643311 1235889999999999999999999999 999999999999
Q ss_pred eCCCCcEEEeeccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCC
Q 041031 144 LDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGN 222 (313)
Q Consensus 144 ~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~ 222 (313)
++.++.+||+|||++......... .......+++.|+|||++.+..++.++||||||+++|+|++ |..||.+....
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-- 266 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYY-KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-- 266 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSE-ECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--
T ss_pred EcCCCCEEEccccccccccccccc-cccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH--
Confidence 999999999999998865543211 11222346788999999998889999999999999999999 99999654321
Q ss_pred CccccchhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcccc
Q 041031 223 NQYTEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSKE 302 (313)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~ 302 (313)
+....+....... .....+..+.+++.+||+.||.+|||+.++++.|+++......
T Consensus 267 ---------------------~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~ 322 (334)
T 2pvf_A 267 ---------------------ELFKLLKEGHRMD---KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322 (334)
T ss_dssp ---------------------HHHHHHHHTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred ---------------------HHHHHHhcCCCCC---CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcccc
Confidence 1122222222111 2234556789999999999999999999999999999876443
No 128
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.9e-44 Score=330.13 Aligned_cols=244 Identities=25% Similarity=0.412 Sum_probs=204.3
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc------cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEE
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK------SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFL 80 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~------~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~l 80 (313)
..++|.+.+.||+|+||.||+|.+. ++.||||++.... ...+.+|+.+++.+ ||||+++++++...+..++
T Consensus 14 ~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~l 93 (476)
T 2y94_A 14 KIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFM 93 (476)
T ss_dssp EETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred eecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 3578999999999999999999987 8899999986532 34688999999999 9999999999999999999
Q ss_pred EEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccccc
Q 041031 81 VYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKL 160 (313)
Q Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~ 160 (313)
||||+++++|.+++. ....+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||++..
T Consensus 94 v~E~~~gg~L~~~l~-----~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~ 165 (476)
T 2y94_A 94 VMEYVSGGELFDYIC-----KNGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNM 165 (476)
T ss_dssp EEECCSSEEHHHHTT-----SSSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred EEeCCCCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhh
Confidence 999999999999983 4567999999999999999999999999 99999999999999999999999999987
Q ss_pred ccCChhhhhhcccccccccccCCccccCCCC-CCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHh
Q 041031 161 LEHSPEIAAAASRIVGTFGYLAPEYVRDGCV-TTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF 239 (313)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (313)
..... ......+++.|+|||++.+..+ +.++|||||||++|+|++|..||......
T Consensus 166 ~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~------------------- 222 (476)
T 2y94_A 166 MSDGE----FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP------------------- 222 (476)
T ss_dssp CCTTC----CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH-------------------
T ss_pred ccccc----cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH-------------------
Confidence 65422 2233468999999999988765 68999999999999999999999754331
Q ss_pred cCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 240 NDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
+....+.... . ......+..+.+|+++||..||.+|||+.++++.
T Consensus 223 ----~~~~~i~~~~---~-~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 223 ----TLFKKICDGI---F-YTPQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp ----HHHHHHHTTC---C-CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ----HHHHHHhcCC---c-CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 1112221111 1 1122344578899999999999999999999974
No 129
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=3.1e-44 Score=307.19 Aligned_cols=251 Identities=22% Similarity=0.363 Sum_probs=204.0
Q ss_pred HHhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEE
Q 041031 9 DATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLV 81 (313)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv 81 (313)
...++|++.+.||+|+||.||+|.+. ++.||+|.+.... .+.+.+|+.+++.+ ||||+++++++.+.+..++|
T Consensus 4 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (276)
T 2yex_A 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (276)
T ss_dssp HHHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ceecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEE
Confidence 35688999999999999999999987 7889999986443 35678899999999 99999999999999999999
Q ss_pred EeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccc
Q 041031 82 YEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL 161 (313)
Q Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~ 161 (313)
||++++++|.+++. ....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+...
T Consensus 84 ~e~~~~~~L~~~l~-----~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 155 (276)
T 2yex_A 84 LEYCSGGELFDRIE-----PDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVF 155 (276)
T ss_dssp EECCTTEEGGGGSB-----TTTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEecCCCcHHHHHh-----hccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCcccc
Confidence 99999999999983 4467899999999999999999999999 999999999999999999999999998765
Q ss_pred cCChhhhhhcccccccccccCCccccCCCC-CCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhc
Q 041031 162 EHSPEIAAAASRIVGTFGYLAPEYVRDGCV-TTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240 (313)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (313)
..... ........+++.|+|||++.+..+ +.++||||||+++|+|++|..||....... ..
T Consensus 156 ~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-------~~---------- 217 (276)
T 2yex_A 156 RYNNR-ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-------QE---------- 217 (276)
T ss_dssp EETTE-ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS-------HH----------
T ss_pred CCCcc-hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHH-------HH----------
Confidence 43221 112233468999999999987665 778999999999999999999997654321 00
Q ss_pred CcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 241 DTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
....... ..........+..+.+|+.+||+.||.+|||+.++++.
T Consensus 218 -----~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 218 -----YSDWKEK--KTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp -----HHHHHTT--CTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -----HHHhhhc--ccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 0000000 00011123445678899999999999999999999863
No 130
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-45 Score=330.21 Aligned_cols=256 Identities=24% Similarity=0.307 Sum_probs=203.8
Q ss_pred hHHHHHHhcCccccceeccCCeEEEEEeEEC--CcceEEEecccc------ccHHHHHHHHHHHhc-CCCceeeeeEEEe
Q 041031 4 YNEVRDATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT------KSKEFSSELKILCKV-HSNLIELIGYAAG 74 (313)
Q Consensus 4 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~------~~~~~~~e~~~l~~l-h~~i~~~~~~~~~ 74 (313)
+..++...++|++.+.||+|+||.||+|+++ ++.||+|++... ....+.+|..++..+ ||||+++++++.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 3444556789999999999999999999987 889999998653 233478899999999 9999999999999
Q ss_pred CCeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEee
Q 041031 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIAD 154 (313)
Q Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~d 154 (313)
.+.+++||||+++|+|.+++. .....+++..++.++.|++.||.|||+++ |+|+||||+||+++.+|.+||+|
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~----~~~~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~D 205 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLS----KFGERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLAD 205 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHH----HHSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECC
T ss_pred CCEEEEEEcCCCCCcHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEee
Confidence 999999999999999999994 22346899999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCChhhhhhcccccccccccCCcccc-------CCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCcccc
Q 041031 155 FGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVR-------DGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTE 227 (313)
Q Consensus 155 fg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~-------~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~ 227 (313)
||++........ .......+|+.|+|||++. +..++.++|+|||||++|+|++|+.||.+....
T Consensus 206 FGla~~~~~~~~--~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~------- 276 (412)
T 2vd5_A 206 FGSCLKLRADGT--VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA------- 276 (412)
T ss_dssp CTTCEECCTTSC--EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH-------
T ss_pred chhheeccCCCc--cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH-------
Confidence 999986554321 1222357899999999997 356899999999999999999999999754321
Q ss_pred chhHHHHHHHHhcCcHHHHHHhhhh-cCCCCCCCCHHHHHHHHHHHhhccccCcCCC---CCHHHHHHH
Q 041031 228 HRSLVDYMLAVFNDTKDFMAKLTEC-LDPNLTRYHKDSMLQMALLSKDCVDENWKRR---PDMSNAAIR 292 (313)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~R---ps~~~ll~~ 292 (313)
+....+... ............+..+.+||++||. +|.+| |+++|+++.
T Consensus 277 ----------------~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 277 ----------------ETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp ----------------HHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred ----------------HHHHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 111111110 0011111123445678899999999 99998 588888753
No 131
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.4e-44 Score=315.88 Aligned_cols=266 Identities=22% Similarity=0.361 Sum_probs=187.4
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEe
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYE 83 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e 83 (313)
.++|++++.||+|+||.||+|.+. ++.||+|.+.... ...+.+|+.+++.+ ||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 578999999999999999999887 7889999986432 45688999999999 9999999999999999999999
Q ss_pred ecCCCChhhhhcCCCC-CCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccccccc
Q 041031 84 YAQNGALSDHLHWPSV-KGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLE 162 (313)
Q Consensus 84 ~~~~~~L~~~l~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~ 162 (313)
|++ ++|.+++..... .....+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||++....
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 997 599988853221 22346899999999999999999999999 9999999999999999999999999988654
Q ss_pred CChhhhhhcccccccccccCCccccC-CCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcC
Q 041031 163 HSPEIAAAASRIVGTFGYLAPEYVRD-GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFND 241 (313)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (313)
... .......+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.... .....+......
T Consensus 160 ~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---------~~~~~i~~~~~~ 227 (317)
T 2pmi_A 160 IPV---NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE---------EQLKLIFDIMGT 227 (317)
T ss_dssp SCC---CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---------HHHHHHHHHHCS
T ss_pred CCc---ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH---------HHHHHHHHHhCC
Confidence 321 12223467999999999976 46899999999999999999999999765431 111111110000
Q ss_pred -cHHHHHHhhhh--cCCCCCC-------------CCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 242 -TKDFMAKLTEC--LDPNLTR-------------YHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 242 -~~~~~~~l~~~--~~~~~~~-------------~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
........... ..+.... .....+..+.+|+.+||+.||.+|||+.|+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 228 PNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp CCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 00000000000 0000000 011234578999999999999999999999864
No 132
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.1e-44 Score=315.35 Aligned_cols=263 Identities=23% Similarity=0.311 Sum_probs=197.8
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVY 82 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~ 82 (313)
.++|++.++||+|+||.||+|.+. ++.||+|.+.... ...+.+|+.+++.+ ||||+++++++.+.+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 578999999999999999999987 7889999886543 23467899999999 999999999999999999999
Q ss_pred eecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccccccc
Q 041031 83 EYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLE 162 (313)
Q Consensus 83 e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~ 162 (313)
||+++++|.+++. ....+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||.+....
T Consensus 82 e~~~~~~l~~~~~-----~~~~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 153 (311)
T 4agu_A 82 EYCDHTVLHELDR-----YQRGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLT 153 (311)
T ss_dssp ECCSEEHHHHHHH-----TSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EeCCCchHHHHHh-----hhcCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhcc
Confidence 9999999998873 4466899999999999999999999999 9999999999999999999999999998765
Q ss_pred CChhhhhhcccccccccccCCccccC-CCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcC
Q 041031 163 HSPEIAAAASRIVGTFGYLAPEYVRD-GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFND 241 (313)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (313)
.... ......+++.|+|||++.+ ..++.++||||||+++|+|++|..||.+.... .............
T Consensus 154 ~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~ 222 (311)
T 4agu_A 154 GPSD---YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV--------DQLYLIRKTLGDL 222 (311)
T ss_dssp ---------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHHHCSC
T ss_pred Cccc---ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHHHhccc
Confidence 3322 2223467899999999976 66899999999999999999999999765432 0111111110000
Q ss_pred cHHHHHHhh---hhcCCCCCC---------CCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 242 TKDFMAKLT---ECLDPNLTR---------YHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 242 ~~~~~~~l~---~~~~~~~~~---------~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
.+....... ......... .....+..+.+|+.+||+.||.+|||+.|+++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 223 IPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp CHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred ccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000000000 000000000 112345678899999999999999999999864
No 133
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-44 Score=310.86 Aligned_cols=260 Identities=24% Similarity=0.353 Sum_probs=205.8
Q ss_pred CccccceeccCCeEEEEEeEEC--C---cceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeE-EEE
Q 041031 13 NFSTSLKIGQGSYGSVYLGKLR--G---KNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAGGDSL-FLV 81 (313)
Q Consensus 13 ~y~~~~~lg~g~~g~v~~~~~~--~---~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~-~lv 81 (313)
.|.+.++||+|+||.||+|.+. + ..+|+|.+.... .+.+.+|+.+++.+ ||||+++++++.+.+.. +++
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 4566799999999999999864 2 268999987543 34577899999999 99999999999876655 999
Q ss_pred EeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccc
Q 041031 82 YEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL 161 (313)
Q Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~ 161 (313)
||++.+++|.+++. .....+++..++.++.|++.||+|||+++ ++|+||||+||+++.++.++|+|||++...
T Consensus 102 ~e~~~~~~L~~~~~----~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 174 (298)
T 3pls_A 102 LPYMCHGDLLQFIR----SPQRNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDI 174 (298)
T ss_dssp ECCCTTCBHHHHHH----CTTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTT
T ss_pred EecccCCCHHHHHh----ccccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCcccc
Confidence 99999999999995 33567899999999999999999999999 999999999999999999999999999765
Q ss_pred cCChhh-hhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhc
Q 041031 162 EHSPEI-AAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240 (313)
Q Consensus 162 ~~~~~~-~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (313)
...... ........+++.|+|||.+.+..++.++||||||+++|+|++|..|+...... .
T Consensus 175 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~--------~----------- 235 (298)
T 3pls_A 175 LDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP--------F----------- 235 (298)
T ss_dssp TTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG--------G-----------
T ss_pred cCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH--------H-----------
Confidence 432211 11222346788999999999999999999999999999999966554332221 0
Q ss_pred CcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcccccc
Q 041031 241 DTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSKEWE 304 (313)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~~~ 304 (313)
+....+...... ......+..+.+++.+||+.||.+|||+.++++.|+++.......+
T Consensus 236 ---~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~~ 293 (298)
T 3pls_A 236 ---DLTHFLAQGRRL---PQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGDH 293 (298)
T ss_dssp ---GHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSCC
T ss_pred ---HHHHHhhcCCCC---CCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhccc
Confidence 112222221111 1223345678899999999999999999999999999988765443
No 134
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=9e-45 Score=312.36 Aligned_cols=249 Identities=26% Similarity=0.399 Sum_probs=197.0
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEE
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVY 82 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~ 82 (313)
..++|.+.++||+|+||.||+|.+. +..+|+|.+.... .+.+.+|+++++.+ ||||+++++++.+.+..++||
T Consensus 20 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 99 (285)
T 3is5_A 20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVM 99 (285)
T ss_dssp HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEE
Confidence 4578999999999999999999987 7889999986543 46688999999999 999999999999999999999
Q ss_pred eecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeee---CCCCcEEEeeccccc
Q 041031 83 EYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILL---DSNFRAKIADFGLVK 159 (313)
Q Consensus 83 e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~---~~~~~~~l~dfg~~~ 159 (313)
||+++++|.+.+.... .....+++..++.++.|++.||.|||+.+ ++|+||+|+||++ +.++.++|+|||++.
T Consensus 100 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~ 175 (285)
T 3is5_A 100 ETCEGGELLERIVSAQ-ARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175 (285)
T ss_dssp CCCSCCBHHHHHHHHH-HHTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred EeCCCCcHHHHHHhhh-hcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence 9999999999884221 12367899999999999999999999999 9999999999999 456789999999997
Q ss_pred cccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHh
Q 041031 160 LLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF 239 (313)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (313)
...... ......+++.|+|||++. ..++.++||||||+++|+|++|..||.+....
T Consensus 176 ~~~~~~----~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~------------------- 231 (285)
T 3is5_A 176 LFKSDE----HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE------------------- 231 (285)
T ss_dssp C--------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-------------------
T ss_pred ecCCcc----cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH-------------------
Confidence 654332 223346899999999986 46889999999999999999999999754321
Q ss_pred cCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 041031 240 NDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAI 291 (313)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 291 (313)
+...... ...+.........+..+.+|+.+||+.||++|||+.|+++
T Consensus 232 ----~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 232 ----EVQQKAT-YKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp ----HHHHHHH-HCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ----HHHhhhc-cCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111111 1111111112224567889999999999999999999985
No 135
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.4e-44 Score=317.18 Aligned_cols=261 Identities=30% Similarity=0.483 Sum_probs=209.3
Q ss_pred hcCccccceeccCCeEEEEEeEEC--Ccc--eEEEecccc----ccHHHHHHHHHHHhc--CCCceeeeeEEEeCCeEEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKN--AAIKQMKNT----KSKEFSSELKILCKV--HSNLIELIGYAAGGDSLFL 80 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~--~aiK~~~~~----~~~~~~~e~~~l~~l--h~~i~~~~~~~~~~~~~~l 80 (313)
.++|++.+.||+|+||.||+|++. +.. +++|.+... ....+.+|+.+++.+ ||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 478999999999999999999886 443 488888643 244588899999999 9999999999999999999
Q ss_pred EEeecCCCChhhhhcCCCC-----------CCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCc
Q 041031 81 VYEYAQNGALSDHLHWPSV-----------KGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFR 149 (313)
Q Consensus 81 v~e~~~~~~L~~~l~~~~~-----------~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~ 149 (313)
||||+++++|.+++..... .....+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCe
Confidence 9999999999999964320 12347899999999999999999999999 999999999999999999
Q ss_pred EEEeeccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccc
Q 041031 150 AKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEH 228 (313)
Q Consensus 150 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~ 228 (313)
++|+|||++...... .......+++.|+|||++.+..++.++||||||+++|+|++ |..||......
T Consensus 181 ~kL~Dfg~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-------- 248 (327)
T 1fvr_A 181 AKIADFGLSRGQEVY----VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-------- 248 (327)
T ss_dssp EEECCTTCEESSCEE----CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--------
T ss_pred EEEcccCcCcccccc----ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH--------
Confidence 999999998743321 11222346788999999998889999999999999999998 99999654321
Q ss_pred hhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcccccc
Q 041031 229 RSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSKEWE 304 (313)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~~~ 304 (313)
+....+...... ......+..+.+|+.+||+.||.+|||+.++++.|.++..+.....
T Consensus 249 ---------------~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~ 306 (327)
T 1fvr_A 249 ---------------ELYEKLPQGYRL---EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYV 306 (327)
T ss_dssp ---------------HHHHHGGGTCCC---CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSCSB
T ss_pred ---------------HHHHHhhcCCCC---CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhcCcc
Confidence 112222222111 1233455678999999999999999999999999999998755443
No 136
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.5e-44 Score=308.32 Aligned_cols=248 Identities=25% Similarity=0.432 Sum_probs=184.9
Q ss_pred HHHhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc------cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeE
Q 041031 8 RDATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK------SKEFSSELKILCKV-HSNLIELIGYAAGGDSL 78 (313)
Q Consensus 8 ~~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~------~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~ 78 (313)
-...++|.+.+.||+|+||.||+|.+. ++.||+|.+.... ...+.+|+.+++.+ ||||+++++++.+.+..
T Consensus 7 g~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 86 (278)
T 3cok_A 7 GEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYV 86 (278)
T ss_dssp CSSGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEE
T ss_pred ccccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeE
Confidence 345688999999999999999999985 8899999986432 35688999999999 99999999999999999
Q ss_pred EEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccc
Q 041031 79 FLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLV 158 (313)
Q Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~ 158 (313)
++||||+++++|.+++. .....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+
T Consensus 87 ~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~ 159 (278)
T 3cok_A 87 YLVLEMCHNGEMNRYLK----NRVKPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLA 159 (278)
T ss_dssp EEEEECCTTEEHHHHHH----TCSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEecCCCCcHHHHHh----hccCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecce
Confidence 99999999999999985 33467899999999999999999999999 999999999999999999999999998
Q ss_pred ccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHH
Q 041031 159 KLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238 (313)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (313)
........ ......+++.|+|||++.+..++.++||||||+++|+|++|..||........
T Consensus 160 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---------------- 220 (278)
T 3cok_A 160 TQLKMPHE---KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT---------------- 220 (278)
T ss_dssp EECC-------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------------------
T ss_pred eeccCCCC---cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH----------------
Confidence 86553221 12234678999999999998899999999999999999999999976543210
Q ss_pred hcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 239 FNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
... ...... ......+..+.+++.+||+.||++|||+.++++.
T Consensus 221 -------~~~---~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 221 -------LNK---VVLADY-EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp -------------CCSSCC-CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -------HHH---Hhhccc-CCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 000 000000 1122345678899999999999999999999863
No 137
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=5.2e-45 Score=333.29 Aligned_cols=256 Identities=28% Similarity=0.467 Sum_probs=205.4
Q ss_pred HhcCccccceeccCCeEEEEEeEEC-CcceEEEeccccc--cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEeec
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR-GKNAAIKQMKNTK--SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYEYA 85 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~-~~~~aiK~~~~~~--~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e~~ 85 (313)
..++|++.++||+|+||.||+|.+. +..||||.++... .+.+.+|+.+++.+ ||||+++++++.+ +..++||||+
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~ 260 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 260 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhh
Confidence 4577999999999999999999998 4679999998643 46788999999999 9999999999876 6789999999
Q ss_pred CCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccccCCh
Q 041031 86 QNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSP 165 (313)
Q Consensus 86 ~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~~~~ 165 (313)
++|+|.+++... ....+++..++.++.|++.||+|||+++ ++|+||||+||++++++.+||+|||++.......
T Consensus 261 ~~gsL~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 334 (452)
T 1fmk_A 261 SKGSLLDFLKGE---TGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334 (452)
T ss_dssp TTCBHHHHHSHH---HHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC------
T ss_pred cCCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceecCCCc
Confidence 999999999421 2245889999999999999999999999 9999999999999999999999999998654322
Q ss_pred hhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchhHHHHHHHHhcCcHH
Q 041031 166 EIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKD 244 (313)
Q Consensus 166 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (313)
. .......++..|+|||++.+..++.++||||||+++|+|++ |..||.+.... +
T Consensus 335 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-----------------------~ 389 (452)
T 1fmk_A 335 Y--TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----------------------E 389 (452)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----------------------H
T ss_pred e--ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH-----------------------H
Confidence 1 11222346788999999998999999999999999999999 99999754321 1
Q ss_pred HHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcc
Q 041031 245 FMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISS 300 (313)
Q Consensus 245 ~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 300 (313)
....+...... .....++..+.+|+.+||+.||.+|||+.+|++.|+.+..+.
T Consensus 390 ~~~~i~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 390 VLDQVERGYRM---PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp HHHHHHTTCCC---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred HHHHHHcCCCC---CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 12222211111 123345667899999999999999999999999999987654
No 138
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=8.9e-45 Score=321.09 Aligned_cols=245 Identities=25% Similarity=0.359 Sum_probs=201.2
Q ss_pred HHhcCccccceeccCCeEEEEEeEEC--CcceEEEecccc------ccHHHHHHHHHHHhc--CCCceeeeeEEEeCCeE
Q 041031 9 DATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT------KSKEFSSELKILCKV--HSNLIELIGYAAGGDSL 78 (313)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~------~~~~~~~e~~~l~~l--h~~i~~~~~~~~~~~~~ 78 (313)
...++|.+.+.||+|+||.||+|+++ ++.||+|+++.. ..+.+..|..++..+ ||+|+++++++.+.+.+
T Consensus 17 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~ 96 (353)
T 2i0e_A 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 96 (353)
T ss_dssp --CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred CchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence 35689999999999999999999998 678999998753 344577899999887 99999999999999999
Q ss_pred EEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccc
Q 041031 79 FLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLV 158 (313)
Q Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~ 158 (313)
++||||+++|+|.+++. ....+++..++.++.|++.||.|||+++ ++|+||||+||+++.+|.++|+|||++
T Consensus 97 ~lv~E~~~gg~L~~~l~-----~~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a 168 (353)
T 2i0e_A 97 YFVMEYVNGGDLMYHIQ-----QVGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMC 168 (353)
T ss_dssp EEEEECCCSCBHHHHHH-----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEeCCCCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCcc
Confidence 99999999999999984 3356899999999999999999999999 999999999999999999999999998
Q ss_pred ccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHH
Q 041031 159 KLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238 (313)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (313)
....... .......+|+.|+|||++.+..++.++|+|||||++|+|++|..||.+....
T Consensus 169 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~------------------ 227 (353)
T 2i0e_A 169 KENIWDG---VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED------------------ 227 (353)
T ss_dssp BCCCCTT---CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH------------------
T ss_pred cccccCC---cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH------------------
Confidence 7543221 2233457899999999999999999999999999999999999999754321
Q ss_pred hcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCC-----HHHHHH
Q 041031 239 FNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPD-----MSNAAI 291 (313)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps-----~~~ll~ 291 (313)
+....+.. ... ......+..+.+|+.+||..||.+||+ +.++++
T Consensus 228 -----~~~~~i~~---~~~-~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 228 -----ELFQSIME---HNV-AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp -----HHHHHHHH---CCC-CCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred -----HHHHHHHh---CCC-CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 11111111 111 122345567889999999999999995 466654
No 139
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.7e-44 Score=313.33 Aligned_cols=248 Identities=23% Similarity=0.364 Sum_probs=203.3
Q ss_pred HHhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc---cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEE
Q 041031 9 DATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK---SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVY 82 (313)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~---~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~ 82 (313)
...++|.+.+.||+|+||.||+|++. ++.+|+|.+.... ...+.+|+.+++.+ ||||+++++++.+.+..++||
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (304)
T 2jam_A 6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVM 85 (304)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred chhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEE
Confidence 45678999999999999999999987 8899999987543 44578999999999 999999999999999999999
Q ss_pred eecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeee---CCCCcEEEeeccccc
Q 041031 83 EYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILL---DSNFRAKIADFGLVK 159 (313)
Q Consensus 83 e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~---~~~~~~~l~dfg~~~ 159 (313)
|++++++|.+++. ....+++..++.++.|++.||.|||+.+ ++|+||+|+||++ +.++.++|+|||.+.
T Consensus 86 e~~~~~~L~~~l~-----~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~ 157 (304)
T 2jam_A 86 QLVSGGELFDRIL-----ERGVYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSK 157 (304)
T ss_dssp CCCCSCBHHHHHH-----HHSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTTC
T ss_pred EcCCCccHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcce
Confidence 9999999999883 3456899999999999999999999999 9999999999999 778899999999987
Q ss_pred cccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHh
Q 041031 160 LLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF 239 (313)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (313)
...... .....+++.|+|||++.+..++.++||||||+++|+|++|..||......
T Consensus 158 ~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------------------- 213 (304)
T 2jam_A 158 MEQNGI-----MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES------------------- 213 (304)
T ss_dssp CCCCBT-----THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH-------------------
T ss_pred ecCCCc-----cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-------------------
Confidence 544321 12235799999999999999999999999999999999999999654321
Q ss_pred cCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 240 NDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
+....+...............+..+.+++.+||+.||.+|||+.++++.
T Consensus 214 ----~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 214 ----KLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp ----HHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ----HHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1112222111111111223455678999999999999999999999864
No 140
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=2.4e-44 Score=313.66 Aligned_cols=264 Identities=25% Similarity=0.374 Sum_probs=201.4
Q ss_pred HHHhcCccccceeccCCeEEEEEeEEC-----CcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEeCC
Q 041031 8 RDATSNFSTSLKIGQGSYGSVYLGKLR-----GKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAGGD 76 (313)
Q Consensus 8 ~~~~~~y~~~~~lg~g~~g~v~~~~~~-----~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~ 76 (313)
....++|.+.+.||+|+||.||+|.+. +..||+|.+.... .+.+.+|+.+++.+ ||||+++++++.+.+
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 109 (313)
T 3brb_A 30 VIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109 (313)
T ss_dssp BCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC--
T ss_pred ccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecc
Confidence 344678999999999999999999875 2379999987542 34577899999999 999999999997655
Q ss_pred -----eEEEEEeecCCCChhhhhcCCCC-CCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcE
Q 041031 77 -----SLFLVYEYAQNGALSDHLHWPSV-KGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRA 150 (313)
Q Consensus 77 -----~~~lv~e~~~~~~L~~~l~~~~~-~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~ 150 (313)
..++||||+++++|.+++..... .....+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.+
T Consensus 110 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~ 186 (313)
T 3brb_A 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMTV 186 (313)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTTSCE
T ss_pred ccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcE
Confidence 35999999999999999843321 23467999999999999999999999999 9999999999999999999
Q ss_pred EEeeccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccch
Q 041031 151 KIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHR 229 (313)
Q Consensus 151 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~ 229 (313)
+|+|||++........ ........+++.|+|||++.+..++.++||||||+++|+|++ |..||......
T Consensus 187 kl~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--------- 256 (313)
T 3brb_A 187 CVADFGLSKKIYSGDY-YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH--------- 256 (313)
T ss_dssp EECSCSCC-----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---------
T ss_pred EEeecCcceecccccc-cCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH---------
Confidence 9999999876543321 112223456789999999999999999999999999999999 88999755432
Q ss_pred hHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhccc
Q 041031 230 SLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSK 301 (313)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~ 301 (313)
+....+.... ........+..+.+++.+||+.||.+|||+.++++.|+.+....+
T Consensus 257 --------------~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp 311 (313)
T 3brb_A 257 --------------EMYDYLLHGH---RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311 (313)
T ss_dssp --------------GHHHHHHTTC---CCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred --------------HHHHHHHcCC---CCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 1122221111 112233455678999999999999999999999999999987654
No 141
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.8e-44 Score=325.37 Aligned_cols=250 Identities=26% Similarity=0.358 Sum_probs=192.9
Q ss_pred HHHhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc-----------cHHHHHHHHHHHhc-CCCceeeeeEEE
Q 041031 8 RDATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK-----------SKEFSSELKILCKV-HSNLIELIGYAA 73 (313)
Q Consensus 8 ~~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~-----------~~~~~~e~~~l~~l-h~~i~~~~~~~~ 73 (313)
....++|.+.+.||+|+||.||+|.+. ++.||||++.... ...+.+|+.+++.+ ||||+++++++.
T Consensus 131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~ 210 (419)
T 3i6u_A 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 210 (419)
T ss_dssp HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE
T ss_pred hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence 345789999999999999999999987 7899999986532 12478899999999 999999999975
Q ss_pred eCCeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCC---cE
Q 041031 74 GGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF---RA 150 (313)
Q Consensus 74 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~---~~ 150 (313)
. +..++||||+++++|.+++ .....+++..++.++.|++.||+|||+++ ++|+||||+||+++.++ .+
T Consensus 211 ~-~~~~lv~e~~~~g~L~~~l-----~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~ 281 (419)
T 3i6u_A 211 A-EDYYIVLELMEGGELFDKV-----VGNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLI 281 (419)
T ss_dssp S-SEEEEEEECCTTCBGGGGT-----SSSCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCE
T ss_pred c-CceEEEEEcCCCCcHHHHH-----hccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceE
Confidence 4 5689999999999999998 34567999999999999999999999999 99999999999997544 59
Q ss_pred EEeeccccccccCChhhhhhcccccccccccCCccccC---CCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCcccc
Q 041031 151 KIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRD---GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTE 227 (313)
Q Consensus 151 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~---~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~ 227 (313)
||+|||++....... ......+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.......
T Consensus 282 kl~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~------ 351 (419)
T 3i6u_A 282 KITDFGHSKILGETS----LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV------ 351 (419)
T ss_dssp EECCSSTTTSCC---------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC------
T ss_pred EEeecccceecCCCc----cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH------
Confidence 999999998765432 2223468999999999863 567889999999999999999999997644321
Q ss_pred chhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 228 HRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
.+ ...+...............+..+.+|+.+||+.||.+|||+.++++.
T Consensus 352 --~~--------------~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 352 --SL--------------KDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp --CH--------------HHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred --HH--------------HHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 11 11111111000000112234578899999999999999999999864
No 142
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.9e-45 Score=319.72 Aligned_cols=238 Identities=21% Similarity=0.327 Sum_probs=200.1
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc-----------cHHHHHHHHHHHhc-CCCceeeeeEEEeC
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK-----------SKEFSSELKILCKV-HSNLIELIGYAAGG 75 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~-----------~~~~~~e~~~l~~l-h~~i~~~~~~~~~~ 75 (313)
..++|++.+.||+|+||.||+|.+. ++.||||.+.... ...+.+|+.+++.+ ||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 4578999999999999999999876 7889999987542 23467899999999 99999999999999
Q ss_pred CeEEEEEeecCCC-ChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEee
Q 041031 76 DSLFLVYEYAQNG-ALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIAD 154 (313)
Q Consensus 76 ~~~~lv~e~~~~~-~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~d 154 (313)
+..++|||++.+| +|.+++. ....+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.++|+|
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~-----~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~D 173 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFID-----RHPRLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLID 173 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHH-----TCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECC
T ss_pred CEEEEEEEeCCCCccHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEee
Confidence 9999999998766 9999984 4457999999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCChhhhhhcccccccccccCCccccCCCC-CCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHH
Q 041031 155 FGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCV-TTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVD 233 (313)
Q Consensus 155 fg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~ 233 (313)
||++....... ......+|+.|+|||++.+..+ +.++||||||+++|+|++|..||......
T Consensus 174 fg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------------- 236 (335)
T 3dls_A 174 FGSAAYLERGK----LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------------- 236 (335)
T ss_dssp CTTCEECCTTC----CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-------------
T ss_pred cccceECCCCC----ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-------------
Confidence 99998765432 2223468999999999988776 78999999999999999999999642210
Q ss_pred HHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 234 YMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 234 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
...... .....+..+.+|+.+||+.||.+|||+.++++.
T Consensus 237 ---------------~~~~~~-----~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 ---------------VEAAIH-----PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ---------------TTTCCC-----CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ---------------HhhccC-----CCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 112234578899999999999999999999985
No 143
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=3.1e-44 Score=331.25 Aligned_cols=248 Identities=24% Similarity=0.355 Sum_probs=202.6
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccc-----cccHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEE
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKN-----TKSKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLV 81 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~-----~~~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv 81 (313)
..++|.+.++||+|+||.||+|.+. ++.||||++.. .....+.+|+.+++.+ ||||+++++++.+.+.+++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 4578999999999999999999987 88899999853 2355688999999999 99999999999999999999
Q ss_pred EeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeC---CCCcEEEeecccc
Q 041031 82 YEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLD---SNFRAKIADFGLV 158 (313)
Q Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~---~~~~~~l~dfg~~ 158 (313)
|||+.+++|.+.+. ....+++..++.++.|++.||.|||+++ |+|+||||+||+++ .++.+||+|||++
T Consensus 100 ~e~~~~~~L~~~~~-----~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 171 (486)
T 3mwu_A 100 GELYTGGELFDEII-----KRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (486)
T ss_dssp ECCCCSCBHHHHHH-----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCT
T ss_pred EEcCCCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcC
Confidence 99999999999883 3456899999999999999999999999 99999999999995 4567999999999
Q ss_pred ccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHH
Q 041031 159 KLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238 (313)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (313)
....... ......+|+.|+|||++.+ .++.++|||||||++|+|++|..||.+....
T Consensus 172 ~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------------------ 228 (486)
T 3mwu_A 172 TCFQQNT----KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY------------------ 228 (486)
T ss_dssp TTBCCC--------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------------------
T ss_pred eECCCCC----ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------------------
Confidence 8665432 2223468999999999976 4899999999999999999999999754321
Q ss_pred hcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHH
Q 041031 239 FNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRL 293 (313)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l 293 (313)
+....+...............+..+.+|+++||..||.+|||+.++++.-
T Consensus 229 -----~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp 278 (486)
T 3mwu_A 229 -----DILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHP 278 (486)
T ss_dssp -----HHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCH
T ss_pred -----HHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCH
Confidence 11222222111111112234556788999999999999999999999863
No 144
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=7.6e-45 Score=318.47 Aligned_cols=262 Identities=21% Similarity=0.326 Sum_probs=193.5
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEeccccccH----HHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEe
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTKSK----EFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYE 83 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~~~----~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e 83 (313)
.++|.+.+.||+|+||.||+|.+. ++.||+|.+...... .+.+|+.+++.+ ||||+++++++.+.+..++|||
T Consensus 1 l~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (324)
T 3mtl_A 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 80 (324)
T ss_dssp CCSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CCceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence 368999999999999999999987 788999998754422 345799999999 9999999999999999999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccccC
Q 041031 84 YAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEH 163 (313)
Q Consensus 84 ~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~~ 163 (313)
|++ ++|.+++. .....+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.....
T Consensus 81 ~~~-~~l~~~~~----~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 152 (324)
T 3mtl_A 81 YLD-KDLKQYLD----DCGNIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSI 152 (324)
T ss_dssp CCS-EEHHHHHH----HTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC--
T ss_pred ccc-cCHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccccC
Confidence 996 58888885 33456899999999999999999999999 99999999999999999999999999876543
Q ss_pred ChhhhhhcccccccccccCCccccC-CCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcCc
Q 041031 164 SPEIAAAASRIVGTFGYLAPEYVRD-GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDT 242 (313)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (313)
... ......+++.|+|||++.+ ..++.++|||||||++|+|++|..||.+.... .....+.......
T Consensus 153 ~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~---------~~~~~i~~~~~~~ 220 (324)
T 3mtl_A 153 PTK---TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE---------EQLHFIFRILGTP 220 (324)
T ss_dssp -------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---------HHHHHHHHHHCCC
T ss_pred Ccc---ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH---------HHHHHHHHHhCCC
Confidence 221 2223467999999999976 56899999999999999999999999765431 1111111100000
Q ss_pred H--HHHH-----HhhhhcCCCCCC-----CCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 243 K--DFMA-----KLTECLDPNLTR-----YHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 243 ~--~~~~-----~l~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
. .+.. .......+.... .....+..+.+|+.+||+.||.+|||+.|+++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 221 TEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp CTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0 0000 000000000000 112334678899999999999999999999863
No 145
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=5.3e-45 Score=336.28 Aligned_cols=249 Identities=24% Similarity=0.362 Sum_probs=204.5
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEecccc------ccHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEE
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT------KSKEFSSELKILCKV-HSNLIELIGYAAGGDSLFL 80 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~------~~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~l 80 (313)
..++|++.+.||+|+||.||+|.+. ++.||||++... ..+.+.+|+.+++.+ ||||+++++++.+.+..++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 4568999999999999999999987 889999998532 345688999999999 9999999999999999999
Q ss_pred EEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeee---CCCCcEEEeeccc
Q 041031 81 VYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILL---DSNFRAKIADFGL 157 (313)
Q Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~---~~~~~~~l~dfg~ 157 (313)
|||++.+++|.+.+. ....+++..++.++.|++.||.|||+++ ++|+||||+||++ +.++.+||+|||+
T Consensus 104 v~e~~~~~~L~~~~~-----~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~ 175 (484)
T 3nyv_A 104 VGEVYTGGELFDEII-----SRKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGL 175 (484)
T ss_dssp EECCCCSCBHHHHHH-----TCSCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTH
T ss_pred EEecCCCCCHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeee
Confidence 999999999999984 4467999999999999999999999999 9999999999999 5678999999999
Q ss_pred cccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHH
Q 041031 158 VKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLA 237 (313)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 237 (313)
+........ .....+|+.|+|||++.+ .++.++|||||||++|+|++|..||.+....
T Consensus 176 a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----------------- 233 (484)
T 3nyv_A 176 STHFEASKK----MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY----------------- 233 (484)
T ss_dssp HHHBCCCCS----HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----------------
T ss_pred eEEcccccc----cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH-----------------
Confidence 886654322 122368999999999976 6899999999999999999999999754321
Q ss_pred HhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 041031 238 VFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLS 294 (313)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~ 294 (313)
+....+...............+..+.+|+++||+.||.+|||+.++++.-+
T Consensus 234 ------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~ 284 (484)
T 3nyv_A 234 ------DILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEW 284 (484)
T ss_dssp ------HHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHH
T ss_pred ------HHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChh
Confidence 112222211111111122345667899999999999999999999997543
No 146
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.9e-44 Score=316.29 Aligned_cols=244 Identities=25% Similarity=0.369 Sum_probs=193.6
Q ss_pred HhcCccccceeccCCeEEEEEeEE-----CCcceEEEeccccc-------cHHHHHHHHHHHhc-CCCceeeeeEEEeCC
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKL-----RGKNAAIKQMKNTK-------SKEFSSELKILCKV-HSNLIELIGYAAGGD 76 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~-----~~~~~aiK~~~~~~-------~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~ 76 (313)
..++|++.+.||+|+||.||+|++ .++.+|+|++.... ...+.+|+.+++.+ ||||+++++++...+
T Consensus 15 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 94 (327)
T 3a62_A 15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG 94 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS
T ss_pred CHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC
Confidence 357899999999999999999987 37889999987542 33467899999999 999999999999999
Q ss_pred eEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecc
Q 041031 77 SLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFG 156 (313)
Q Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg 156 (313)
..++||||+++++|.+++. ....+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||
T Consensus 95 ~~~lv~e~~~~~~L~~~l~-----~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg 166 (327)
T 3a62_A 95 KLYLILEYLSGGELFMQLE-----REGIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFG 166 (327)
T ss_dssp CEEEEEECCTTEEHHHHHH-----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCS
T ss_pred EEEEEEeCCCCCcHHHHHH-----hCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCC
Confidence 9999999999999999984 3456889999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHH
Q 041031 157 LVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYML 236 (313)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 236 (313)
++....... .......+++.|+|||++.+..++.++||||||+++|+|++|..||......
T Consensus 167 ~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---------------- 227 (327)
T 3a62_A 167 LCKESIHDG---TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK---------------- 227 (327)
T ss_dssp CC-------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----------------
T ss_pred cccccccCC---ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH----------------
Confidence 987543221 1223346899999999999989999999999999999999999999754321
Q ss_pred HHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCC-----CHHHHHH
Q 041031 237 AVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRP-----DMSNAAI 291 (313)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-----s~~~ll~ 291 (313)
+....+... ... .....+..+.+|+.+||+.||.+|| ++.++++
T Consensus 228 -------~~~~~i~~~-~~~---~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 228 -------KTIDKILKC-KLN---LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp -------HHHHHHHHT-CCC---CCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred -------HHHHHHHhC-CCC---CCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 111111111 111 1223456788999999999999999 6777775
No 147
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=3.5e-44 Score=309.96 Aligned_cols=264 Identities=23% Similarity=0.292 Sum_probs=206.9
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEecccc-ccHHHHHHHHHHHhc-CCCceeeeeE-EEeCCeEEEEEee
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT-KSKEFSSELKILCKV-HSNLIELIGY-AAGGDSLFLVYEY 84 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~-~~~~~~~e~~~l~~l-h~~i~~~~~~-~~~~~~~~lv~e~ 84 (313)
..++|++.+.||+|+||.||+|.+. ++.||||++... ....+.+|+.+++.+ |++++..+.. ....+..++|||+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEe
Confidence 4578999999999999999999975 889999998654 345688999999999 7665544444 4677888999999
Q ss_pred cCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeC---CCCcEEEeeccccccc
Q 041031 85 AQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLD---SNFRAKIADFGLVKLL 161 (313)
Q Consensus 85 ~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~---~~~~~~l~dfg~~~~~ 161 (313)
+ +++|.+++. .....+++..++.++.|++.||+|||+++ ++|+||||+||+++ .++.++|+|||++...
T Consensus 87 ~-~~~L~~~~~----~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~ 158 (296)
T 3uzp_A 87 L-GPSLEDLFN----FCSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp C-CCBHHHHHH----HTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred c-CCCHHHHHH----hhccCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCcccc
Confidence 9 899999985 23456999999999999999999999999 99999999999994 7889999999999876
Q ss_pred cCChhhh----hhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHH
Q 041031 162 EHSPEIA----AAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLA 237 (313)
Q Consensus 162 ~~~~~~~----~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 237 (313)
....... .......+++.|+|||++.+..++.++||||||+++|+|++|+.||......... .........
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-----~~~~~~~~~ 233 (296)
T 3uzp_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR-----QKYERISEK 233 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS-----SHHHHHHHH
T ss_pred cccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhh-----hhhhhhccc
Confidence 5432211 1123456899999999999999999999999999999999999999865432211 111111111
Q ss_pred HhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcc
Q 041031 238 VFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISS 300 (313)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 300 (313)
..... ...+ ....+..+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 234 ~~~~~-------~~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 282 (296)
T 3uzp_A 234 KMSTP-------IEVL-------CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HHHSC-------HHHH-------TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred ccCCc-------hHHH-------HhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence 10000 0000 1123457889999999999999999999999999998753
No 148
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=3.1e-44 Score=319.54 Aligned_cols=250 Identities=26% Similarity=0.350 Sum_probs=201.5
Q ss_pred HHHHhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc-----------cHHHHHHHHHHHhc--CCCceeeeeE
Q 041031 7 VRDATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK-----------SKEFSSELKILCKV--HSNLIELIGY 71 (313)
Q Consensus 7 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~-----------~~~~~~e~~~l~~l--h~~i~~~~~~ 71 (313)
.....++|.+.+.||+|+||.||+|.+. |+.||||++.... .+.+.+|+.+++.+ ||||++++++
T Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 168 (365)
T 2y7j_A 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS 168 (365)
T ss_dssp HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence 3445678999999999999999999986 8899999986543 23467899999998 9999999999
Q ss_pred EEeCCeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEE
Q 041031 72 AAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAK 151 (313)
Q Consensus 72 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~ 151 (313)
+...+..++||||+++++|.+++. ....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++
T Consensus 169 ~~~~~~~~lv~e~~~g~~L~~~l~-----~~~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~~ik 240 (365)
T 2y7j_A 169 YESSSFMFLVFDLMRKGELFDYLT-----EKVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIR 240 (365)
T ss_dssp EEBSSEEEEEECCCTTCBHHHHHH-----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEE
T ss_pred EeeCCEEEEEEEeCCCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEE
Confidence 999999999999999999999984 3456899999999999999999999999 99999999999999999999
Q ss_pred EeeccccccccCChhhhhhcccccccccccCCccccC------CCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCcc
Q 041031 152 IADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRD------GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQY 225 (313)
Q Consensus 152 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~------~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~ 225 (313)
|+|||++....... ......+|+.|+|||++.+ ..++.++|||||||++|+|++|..||......
T Consensus 241 l~DfG~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~----- 311 (365)
T 2y7j_A 241 LSDFGFSCHLEPGE----KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI----- 311 (365)
T ss_dssp ECCCTTCEECCTTC----CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-----
T ss_pred EEecCcccccCCCc----ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH-----
Confidence 99999988665432 2233568999999999863 35888999999999999999999999653221
Q ss_pred ccchhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 041031 226 TEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAI 291 (313)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 291 (313)
.....+...............+..+.+++.+||+.||.+|||+.++++
T Consensus 312 ------------------~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 312 ------------------LMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp ------------------HHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ------------------HHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111111111000000000123456889999999999999999999986
No 149
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=9.2e-45 Score=322.93 Aligned_cols=265 Identities=18% Similarity=0.263 Sum_probs=201.7
Q ss_pred hcCccccceeccCCeEEEEEeEEC-------CcceEEEeccccccH--------------HHHHHHHHHHhc-CCCceee
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR-------GKNAAIKQMKNTKSK--------------EFSSELKILCKV-HSNLIEL 68 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~-------~~~~aiK~~~~~~~~--------------~~~~e~~~l~~l-h~~i~~~ 68 (313)
.++|++.++||+|+||.||+|.+. ++.||||++...... ....|+..++.+ ||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 358999999999999999999886 367999998765421 122344455556 9999999
Q ss_pred eeEEEeC----CeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeee
Q 041031 69 IGYAAGG----DSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILL 144 (313)
Q Consensus 69 ~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~ 144 (313)
++++... ...++||||+ +++|.+++. .....+++..++.++.|++.||+|||+++ ++|+||||+||++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~----~~~~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill 185 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYE----ANAKRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLL 185 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHH----HTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEE
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHH----hccCCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEE
Confidence 9998764 4589999999 999999995 33467999999999999999999999999 9999999999999
Q ss_pred C--CCCcEEEeeccccccccCChhhhh----hcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCC
Q 041031 145 D--SNFRAKIADFGLVKLLEHSPEIAA----AASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDA 218 (313)
Q Consensus 145 ~--~~~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~ 218 (313)
+ .++.+||+|||++........... ......+|+.|+|||++.+..++.++|||||||++|+|++|..||.+..
T Consensus 186 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~ 265 (364)
T 3op5_A 186 NYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNL 265 (364)
T ss_dssp ESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred ecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccc
Confidence 8 889999999999976654322111 1123458999999999999999999999999999999999999998543
Q ss_pred CCCCCccccchhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHh
Q 041031 219 NPGNNQYTEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILI 298 (313)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 298 (313)
.. ........... .......+..++. ....+..+.+++..||+.||.+||++.+|++.|+.+..
T Consensus 266 ~~--------~~~~~~~~~~~--~~~~~~~~~~~~~------~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~ 329 (364)
T 3op5_A 266 KD--------PKYVRDSKIRY--RENIASLMDKCFP------AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLK 329 (364)
T ss_dssp TC--------HHHHHHHHHHH--HHCHHHHHHHHSC------TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred cC--------HHHHHHHHHHh--hhhHHHHHHHhcc------cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Confidence 22 11111111100 0111222222221 12334578899999999999999999999999999887
Q ss_pred c
Q 041031 299 S 299 (313)
Q Consensus 299 ~ 299 (313)
.
T Consensus 330 ~ 330 (364)
T 3op5_A 330 A 330 (364)
T ss_dssp H
T ss_pred H
Confidence 4
No 150
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.8e-44 Score=323.25 Aligned_cols=272 Identities=21% Similarity=0.297 Sum_probs=211.0
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEeCC--eEEEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAGGD--SLFLV 81 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~--~~~lv 81 (313)
.++|.+.++||+|+||.||+|.+. ++.||||++.... .+.+.+|+++++.+ ||||+++++++.+.+ ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 467999999999999999999998 8899999987533 45577899999999 999999999998765 78999
Q ss_pred EeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeee----CCCCcEEEeeccc
Q 041031 82 YEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILL----DSNFRAKIADFGL 157 (313)
Q Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~----~~~~~~~l~dfg~ 157 (313)
|||+++++|.+++.... ....+++..++.++.|++.||+|||+++ ++|+||||+||++ +.++.+||+|||+
T Consensus 88 ~e~~~~g~L~~~l~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~ 162 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPS--NAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (396)
T ss_dssp ECCCTTEEHHHHTTSGG--GTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred EecCCCCCHHHHHHhhh--cccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence 99999999999985322 2234899999999999999999999999 9999999999999 7777899999999
Q ss_pred cccccCChhhhhhcccccccccccCCccccC--------CCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccch
Q 041031 158 VKLLEHSPEIAAAASRIVGTFGYLAPEYVRD--------GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHR 229 (313)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~--------~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~ 229 (313)
+....... ......+++.|+|||++.+ ..++.++|||||||++|+|++|..||.........
T Consensus 163 a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~------ 232 (396)
T 4eut_A 163 ARELEDDE----QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN------ 232 (396)
T ss_dssp CEECCCGG----GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTC------
T ss_pred ceEccCCC----ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccch------
Confidence 98765432 2223468999999999875 45788999999999999999999999765443211
Q ss_pred hHHHHHHHHhcCcH-HHHHHhhh-------h--cCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhc
Q 041031 230 SLVDYMLAVFNDTK-DFMAKLTE-------C--LDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILIS 299 (313)
Q Consensus 230 ~~~~~~~~~~~~~~-~~~~~l~~-------~--~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 299 (313)
...+.......+ .....+.. + .-+............+.+++++||+.||++|||+.++++.+..++..
T Consensus 233 --~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 233 --KEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp --HHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred --HHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 111111110000 00000000 0 00111124577888899999999999999999999999999998763
No 151
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.7e-44 Score=316.54 Aligned_cols=269 Identities=28% Similarity=0.462 Sum_probs=207.6
Q ss_pred hcCccccceeccCCeEEEEEeEE------CCcceEEEeccccc---cHHHHHHHHHHHhc-CCCceeeeeEEEeCC--eE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKL------RGKNAAIKQMKNTK---SKEFSSELKILCKV-HSNLIELIGYAAGGD--SL 78 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~------~~~~~aiK~~~~~~---~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~--~~ 78 (313)
.++|++.+.||+|+||.||+|++ .++.||||.+.... ...+.+|+.+++.+ ||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 45699999999999999999984 27889999987654 34578999999999 999999999986544 78
Q ss_pred EEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccc
Q 041031 79 FLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLV 158 (313)
Q Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~ 158 (313)
++|||++++++|.+++. .....+++..++.++.|++.||.+||+.+ ++|+||||+||+++.++.++|+|||++
T Consensus 120 ~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~ 192 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQ----KHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLT 192 (326)
T ss_dssp EEEECCCTTCBHHHHHH----HSTTSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred EEEEECCCCCCHHHHHH----hcccCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcch
Confidence 99999999999999995 23356899999999999999999999999 999999999999999999999999999
Q ss_pred ccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHH
Q 041031 159 KLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238 (313)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (313)
.................++..|+|||++.+..++.++||||||+++|+|++|..||..... .+....
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~-------------~~~~~~ 259 (326)
T 2w1i_A 193 KVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA-------------EFMRMI 259 (326)
T ss_dssp EECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHH-------------HHHHHH
T ss_pred hhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHH-------------HHHHhh
Confidence 8765443221222234567789999999988899999999999999999999999863311 010000
Q ss_pred hcC--cHHHHHHhhhhcCC-CCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhc
Q 041031 239 FND--TKDFMAKLTECLDP-NLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILIS 299 (313)
Q Consensus 239 ~~~--~~~~~~~l~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 299 (313)
... .......+...+.. .........+..+.+++.+||+.||.+|||+.+++++|+++...
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 260 GNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp CTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 000 00001111111111 11112334567899999999999999999999999999998753
No 152
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=3.2e-44 Score=331.76 Aligned_cols=247 Identities=26% Similarity=0.396 Sum_probs=198.6
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEecccc-----ccHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEE
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT-----KSKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLV 81 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~-----~~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv 81 (313)
..++|+++++||+|+||.||+|.++ +..+|+|++... ....+.+|+.+++.+ ||||+++++++.+...+++|
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 4567999999999999999999997 778999998643 355688999999999 99999999999999999999
Q ss_pred EeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCC---CCcEEEeecccc
Q 041031 82 YEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDS---NFRAKIADFGLV 158 (313)
Q Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~---~~~~~l~dfg~~ 158 (313)
|||+.+|+|.+.+. ....+++..++.++.|++.||+|||+++ ++|+||||+||+++. ++.+||+|||++
T Consensus 115 ~e~~~~g~L~~~~~-----~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a 186 (494)
T 3lij_A 115 MECYKGGELFDEII-----HRMKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLS 186 (494)
T ss_dssp EECCCSCBHHHHHH-----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EecCCCCcHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCC
Confidence 99999999999883 3456899999999999999999999999 999999999999976 455999999998
Q ss_pred ccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHH
Q 041031 159 KLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238 (313)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (313)
....... ......+|+.|+|||++. ..++.++||||+||++|+|++|..||.+....
T Consensus 187 ~~~~~~~----~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------------------ 243 (494)
T 3lij_A 187 AVFENQK----KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ------------------ 243 (494)
T ss_dssp EECBTTB----CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------------------
T ss_pred eECCCCc----cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH------------------
Confidence 8765432 223346899999999986 46899999999999999999999999754331
Q ss_pred hcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 239 FNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
+....+...............+..+.+|+++||+.||.+|||+.++++.
T Consensus 244 -----~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 244 -----EILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp -----HHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred -----HHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 1122222211111111123445678899999999999999999999864
No 153
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.5e-44 Score=311.30 Aligned_cols=249 Identities=20% Similarity=0.361 Sum_probs=199.0
Q ss_pred hcCccccceeccCCeEEEEEeEEC--C-------cceEEEeccccc---cHHHHHHHHHHHhc-CCCceeeeeEEEeCCe
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--G-------KNAAIKQMKNTK---SKEFSSELKILCKV-HSNLIELIGYAAGGDS 77 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~-------~~~aiK~~~~~~---~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~ 77 (313)
.++|.+.+.||+|+||.||+|.+. + ..+|+|.+.... .+.+.+|+.+++.+ ||||+++++++.+.+.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 578999999999999999999877 3 459999986543 45578999999999 9999999999999999
Q ss_pred EEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCc--------
Q 041031 78 LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFR-------- 149 (313)
Q Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~-------- 149 (313)
.++||||+.+++|.+++. .....+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.
T Consensus 87 ~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~ 159 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLK----KNKNCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPF 159 (289)
T ss_dssp CEEEEECCTTCBHHHHHH----HTGGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred CEEEEECCCCCCHHHHHH----hCCCCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCcccccccce
Confidence 999999999999999995 23345899999999999999999999999 999999999999988876
Q ss_pred EEEeeccccccccCChhhhhhcccccccccccCCccccC-CCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccc
Q 041031 150 AKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRD-GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEH 228 (313)
Q Consensus 150 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~ 228 (313)
++|+|||.+....... ...+++.|+|||++.+ ..++.++||||||+++|+|++|..|+......
T Consensus 160 ~kl~Dfg~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~-------- 224 (289)
T 4fvq_A 160 IKLSDPGISITVLPKD-------ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS-------- 224 (289)
T ss_dssp EEECCCCSCTTTSCHH-------HHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--------
T ss_pred eeeccCcccccccCcc-------ccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch--------
Confidence 9999999987554322 1246888999999987 67899999999999999999965444322221
Q ss_pred hhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcc
Q 041031 229 RSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISS 300 (313)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 300 (313)
. ........ .... ....+..+.+++.+||+.||.+|||+.++++.|+++....
T Consensus 225 ~--------------~~~~~~~~--~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~ 277 (289)
T 4fvq_A 225 Q--------------RKLQFYED--RHQL---PAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD 277 (289)
T ss_dssp H--------------HHHHHHHT--TCCC---CCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred H--------------HHHHHhhc--cCCC---CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 0 00000100 1111 1112345788999999999999999999999999988753
No 154
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=3.6e-44 Score=308.01 Aligned_cols=251 Identities=27% Similarity=0.422 Sum_probs=205.7
Q ss_pred HHhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccccHHHHHHHHHHHhc-CCCceeeeeEEEe-----------
Q 041031 9 DATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIELIGYAAG----------- 74 (313)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~~~~~~~e~~~l~~l-h~~i~~~~~~~~~----------- 74 (313)
....+|++.+.||+|+||.||+|.+. ++.||+|.+.... +.+.+|+++++.+ ||||+++++++..
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 86 (284)
T 2a19_B 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN 86 (284)
T ss_dssp HHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-------
T ss_pred hhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccc
Confidence 35678999999999999999999997 8899999987654 5677899999999 9999999998864
Q ss_pred -----CCeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCc
Q 041031 75 -----GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFR 149 (313)
Q Consensus 75 -----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~ 149 (313)
....++||||+++++|.+++... ....+++..++.++.|++.||.|||+++ ++|+||+|+||++++++.
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~ 160 (284)
T 2a19_B 87 SSRSKTKCLFIQMEFCDKGTLEQWIEKR---RGEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQ 160 (284)
T ss_dssp --CCEEEEEEEEECCCCSCBHHHHHHHG---GGSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTE
T ss_pred ccccCcceEEEEEeccCCCCHHHHHhhc---cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCCCC
Confidence 44589999999999999998522 2356889999999999999999999999 999999999999999999
Q ss_pred EEEeeccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccch
Q 041031 150 AKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHR 229 (313)
Q Consensus 150 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~ 229 (313)
++|+|||++....... ......+++.|+|||++.+..++.++||||||+++|+|++|..|+....
T Consensus 161 ~kl~Dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----------- 225 (284)
T 2a19_B 161 VKIGDFGLVTSLKNDG----KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS----------- 225 (284)
T ss_dssp EEECCCTTCEESSCCS----CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-----------
T ss_pred EEECcchhheeccccc----cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-----------
Confidence 9999999988765432 2223468999999999999999999999999999999999998874210
Q ss_pred hHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhccc
Q 041031 230 SLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSK 301 (313)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~ 301 (313)
.....+. .... ....+..+.+++.+||+.||.+|||+.++++.|+.+..+..
T Consensus 226 --------------~~~~~~~---~~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 226 --------------KFFTDLR---DGII---SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp --------------HHHHHHH---TTCC---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred --------------HHHHHhh---cccc---cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 0111111 1111 12234568889999999999999999999999998876543
No 155
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=6.3e-44 Score=308.76 Aligned_cols=251 Identities=24% Similarity=0.286 Sum_probs=202.7
Q ss_pred HHHHHhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc------------cHHHHHHHHHHHhc--CCCceeee
Q 041031 6 EVRDATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK------------SKEFSSELKILCKV--HSNLIELI 69 (313)
Q Consensus 6 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~------------~~~~~~e~~~l~~l--h~~i~~~~ 69 (313)
......++|.+.+.||+|+||.||+|.+. ++.||||++.... .+.+.+|+.+++.+ ||||++++
T Consensus 11 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~ 90 (298)
T 1phk_A 11 STHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLK 90 (298)
T ss_dssp ----CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred CCcchhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeee
Confidence 34566789999999999999999999987 7889999986442 23467899999999 99999999
Q ss_pred eEEEeCCeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCc
Q 041031 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFR 149 (313)
Q Consensus 70 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~ 149 (313)
+++...+..++|||++++++|.+++. ....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.
T Consensus 91 ~~~~~~~~~~lv~e~~~~~~L~~~l~-----~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~ 162 (298)
T 1phk_A 91 DTYETNTFFFLVFDLMKKGELFDYLT-----EKVTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMN 162 (298)
T ss_dssp EEEECSSEEEEEEECCTTCBHHHHHH-----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCC
T ss_pred eeeccCCeEEEEEeccCCCcHHHHHh-----ccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCc
Confidence 99999999999999999999999984 3457899999999999999999999999 999999999999999999
Q ss_pred EEEeeccccccccCChhhhhhcccccccccccCCcccc------CCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCC
Q 041031 150 AKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVR------DGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNN 223 (313)
Q Consensus 150 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~------~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~ 223 (313)
++|+|||.+....... ......+++.|+|||++. ...++.++||||||+++|+|++|..||......
T Consensus 163 ~kl~dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--- 235 (298)
T 1phk_A 163 IKLTDFGFSCQLDPGE----KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM--- 235 (298)
T ss_dssp EEECCCTTCEECCTTC----CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---
T ss_pred EEEecccchhhcCCCc----ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH---
Confidence 9999999988655332 223346899999999985 456889999999999999999999999654321
Q ss_pred ccccchhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 041031 224 QYTEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAI 291 (313)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 291 (313)
+....+...............+..+.+++.+||+.||.+|||+.++++
T Consensus 236 --------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 236 --------------------LMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp --------------------HHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred --------------------HHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 111111111111111122345678999999999999999999999986
No 156
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=7.7e-45 Score=321.16 Aligned_cols=264 Identities=17% Similarity=0.218 Sum_probs=198.5
Q ss_pred hcCccccceeccCCeEEEEEeEEC-----CcceEEEecccccc--------------HHHHHHHHHHHhc-CCCceeeee
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR-----GKNAAIKQMKNTKS--------------KEFSSELKILCKV-HSNLIELIG 70 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~-----~~~~aiK~~~~~~~--------------~~~~~e~~~l~~l-h~~i~~~~~ 70 (313)
.++|.+.+.||+|+||.||+|.+. +..+|+|....... ..+.+|+..++.+ ||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 357999999999999999999985 56789999875431 2245677888888 999999999
Q ss_pred EEEe----CCeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCC
Q 041031 71 YAAG----GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDS 146 (313)
Q Consensus 71 ~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~ 146 (313)
++.. ....++|||++ +++|.+++. ....+++..++.++.|++.||+|||+++ ++|+||||+||+++.
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~-----~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~ 186 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISG-----QNGTFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGY 186 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCB-----GGGBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEES
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEcc
Confidence 9987 77899999999 999999984 3347999999999999999999999999 999999999999988
Q ss_pred CC--cEEEeeccccccccCChhhh----hhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCC
Q 041031 147 NF--RAKIADFGLVKLLEHSPEIA----AAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANP 220 (313)
Q Consensus 147 ~~--~~~l~dfg~~~~~~~~~~~~----~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~ 220 (313)
++ .++|+|||++.......... .......+++.|+|||++.+..++.++|||||||++|+|++|..||......
T Consensus 187 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~ 266 (345)
T 2v62_A 187 KNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKD 266 (345)
T ss_dssp SSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTC
T ss_pred CCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccc
Confidence 77 99999999997664322110 1113346899999999999999999999999999999999999999643221
Q ss_pred CCCccccchhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhc
Q 041031 221 GNNQYTEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILIS 299 (313)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 299 (313)
...............+ ..+..... ....+..+.+++.+||+.||.+|||+.+|++.|+.+...
T Consensus 267 -------~~~~~~~~~~~~~~~~---~~~~~~~~------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 329 (345)
T 2v62_A 267 -------PVAVQTAKTNLLDELP---QSVLKWAP------SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIP 329 (345)
T ss_dssp -------HHHHHHHHHHHHHTTT---HHHHHHSC------TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCC
T ss_pred -------cHHHHHHHHhhccccc---HHHHhhcc------ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCc
Confidence 0111111111111111 11111110 113445789999999999999999999999999987654
No 157
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=6.4e-44 Score=306.75 Aligned_cols=244 Identities=21% Similarity=0.360 Sum_probs=203.1
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEecccc------ccHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEE
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT------KSKEFSSELKILCKV-HSNLIELIGYAAGGDSLFL 80 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~------~~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~l 80 (313)
..++|.+.+.||+|+||.||+|.+. +..+|+|++... ....+.+|+.+++.+ ||||+++++++.+.+..++
T Consensus 12 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 91 (284)
T 2vgo_A 12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYL 91 (284)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEE
Confidence 3578999999999999999999987 678999998643 235688999999999 9999999999999999999
Q ss_pred EEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccccc
Q 041031 81 VYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKL 160 (313)
Q Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~ 160 (313)
|||++++++|.+++. ....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+..
T Consensus 92 v~e~~~~~~L~~~l~-----~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~ 163 (284)
T 2vgo_A 92 MLEFAPRGELYKELQ-----KHGRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVH 163 (284)
T ss_dssp EECCCTTEEHHHHHH-----HHSSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEeCCCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEeccccccc
Confidence 999999999999984 3356899999999999999999999999 99999999999999999999999999876
Q ss_pred ccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhc
Q 041031 161 LEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240 (313)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (313)
.... ......+++.|+|||++.+..++.++||||||+++|+|++|..||......
T Consensus 164 ~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------------------- 218 (284)
T 2vgo_A 164 APSL-----RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT-------------------- 218 (284)
T ss_dssp CSSS-----CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--------------------
T ss_pred Cccc-----ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh--------------------
Confidence 5432 122346899999999999999999999999999999999999999654321
Q ss_pred CcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHH
Q 041031 241 DTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRL 293 (313)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l 293 (313)
+....+.. .+.. .....+..+.+++.+||+.||.+|||+.++++.-
T Consensus 219 ---~~~~~~~~-~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~ 264 (284)
T 2vgo_A 219 ---ETHRRIVN-VDLK---FPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHP 264 (284)
T ss_dssp ---HHHHHHHT-TCCC---CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCH
T ss_pred ---HHHHHHhc-cccC---CCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCH
Confidence 11111111 1111 1223456788999999999999999999998743
No 158
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5e-44 Score=337.65 Aligned_cols=254 Identities=26% Similarity=0.440 Sum_probs=202.4
Q ss_pred ccccc-eeccCCeEEEEEeEEC----CcceEEEecccc----ccHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEe
Q 041031 14 FSTSL-KIGQGSYGSVYLGKLR----GKNAAIKQMKNT----KSKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYE 83 (313)
Q Consensus 14 y~~~~-~lg~g~~g~v~~~~~~----~~~~aiK~~~~~----~~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e 83 (313)
+.+.. .||+|+||.||+|.+. +..||||+++.. ..+.+.+|+++++.+ ||||+++++++.. +..++|||
T Consensus 337 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E 415 (613)
T 2ozo_A 337 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVME 415 (613)
T ss_dssp EEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEE
T ss_pred eeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEE
Confidence 33444 7999999999999874 456999999764 345688999999999 9999999999976 56899999
Q ss_pred ecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccccC
Q 041031 84 YAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEH 163 (313)
Q Consensus 84 ~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~~ 163 (313)
|+.+|+|.+++. .....+++..++.++.|++.||+|||+++ |+|+||||+||+++.++.+||+|||++.....
T Consensus 416 ~~~~g~L~~~l~----~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~ 488 (613)
T 2ozo_A 416 MAGGGPLHKFLV----GKREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGA 488 (613)
T ss_dssp CCTTCBHHHHHT----TCTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC-
T ss_pred eCCCCcHHHHHh----hccCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccC
Confidence 999999999985 33466899999999999999999999999 99999999999999999999999999987654
Q ss_pred ChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchhHHHHHHHHhcCc
Q 041031 164 SPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLVDYMLAVFNDT 242 (313)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (313)
............+++.|+|||++.+..++.++||||||+++|+|++ |..||......
T Consensus 489 ~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~---------------------- 546 (613)
T 2ozo_A 489 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP---------------------- 546 (613)
T ss_dssp -------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH----------------------
T ss_pred CCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH----------------------
Confidence 3222222222345688999999999999999999999999999998 99999765442
Q ss_pred HHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhccc
Q 041031 243 KDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSK 301 (313)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~ 301 (313)
+....+...... .....++..+.+|+.+||+.||.+|||+.+|++.|+.+..+..
T Consensus 547 -~~~~~i~~~~~~---~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~ 601 (613)
T 2ozo_A 547 -EVMAFIEQGKRM---ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 601 (613)
T ss_dssp -HHHHHHHTTCCC---CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHS
T ss_pred -HHHHHHHcCCCC---CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhc
Confidence 222222222111 1234566789999999999999999999999999999877543
No 159
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=3.6e-44 Score=332.19 Aligned_cols=250 Identities=25% Similarity=0.378 Sum_probs=200.4
Q ss_pred HHhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc----------------cHHHHHHHHHHHhc-CCCceeee
Q 041031 9 DATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK----------------SKEFSSELKILCKV-HSNLIELI 69 (313)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~----------------~~~~~~e~~~l~~l-h~~i~~~~ 69 (313)
.+.++|.++++||+|+||.||+|.++ ++.+|+|++.... .+.+.+|+.+++.+ ||||++++
T Consensus 33 ~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~ 112 (504)
T 3q5i_A 33 KIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLF 112 (504)
T ss_dssp CGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred CcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence 35688999999999999999999987 6789999986432 34578899999999 99999999
Q ss_pred eEEEeCCeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCC-
Q 041031 70 GYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF- 148 (313)
Q Consensus 70 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~- 148 (313)
+++.+...+++||||+++++|.+.+. ....+++..++.++.|++.||+|||+++ ++|+||||+||+++.++
T Consensus 113 ~~~~~~~~~~lv~e~~~gg~L~~~l~-----~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~ 184 (504)
T 3q5i_A 113 DVFEDKKYFYLVTEFYEGGELFEQII-----NRHKFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNS 184 (504)
T ss_dssp EEEECSSEEEEEEECCTTCBHHHHHH-----HHSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTC
T ss_pred EEEEcCCEEEEEEecCCCCcHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCC
Confidence 99999999999999999999999884 3456999999999999999999999999 99999999999998765
Q ss_pred --cEEEeeccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccc
Q 041031 149 --RAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYT 226 (313)
Q Consensus 149 --~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~ 226 (313)
.++|+|||++....... ......+|+.|+|||++.+ .++.++||||+||++|+|++|..||.+....
T Consensus 185 ~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------ 253 (504)
T 3q5i_A 185 LLNIKIVDFGLSSFFSKDY----KLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ------ 253 (504)
T ss_dssp CSSEEECCCTTCEECCTTS----CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------
T ss_pred CccEEEEECCCCEEcCCCC----ccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHH------
Confidence 69999999998765432 2233468999999999874 6899999999999999999999999764431
Q ss_pred cchhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 041031 227 EHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLS 294 (313)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~ 294 (313)
+....+....-..........+..+.+|+++||..||.+|||+.++++.-+
T Consensus 254 -----------------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~ 304 (504)
T 3q5i_A 254 -----------------DIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRW 304 (504)
T ss_dssp -----------------HHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred -----------------HHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHh
Confidence 111111111000000011223467889999999999999999999986543
No 160
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.1e-43 Score=308.07 Aligned_cols=249 Identities=24% Similarity=0.401 Sum_probs=206.1
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEE
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVY 82 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~ 82 (313)
..+.|.+.+.||+|+||.||+|.+. ++.||||++.... .+.+.+|+.+++.+ ||||+++++++.+....++||
T Consensus 20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 99 (303)
T 3a7i_A 20 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 99 (303)
T ss_dssp GGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence 3467999999999999999999886 7889999986442 46688999999999 999999999999999999999
Q ss_pred eecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccccccc
Q 041031 83 EYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLE 162 (313)
Q Consensus 83 e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~ 162 (313)
||+++++|.+++. ...+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+....
T Consensus 100 e~~~~~~L~~~~~------~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 170 (303)
T 3a7i_A 100 EYLGGGSALDLLE------PGPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLT 170 (303)
T ss_dssp ECCTTEEHHHHHT------TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECB
T ss_pred EeCCCCcHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecC
Confidence 9999999999983 356899999999999999999999999 9999999999999999999999999987655
Q ss_pred CChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcCc
Q 041031 163 HSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDT 242 (313)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (313)
... .......+++.|+|||++.+..++.++||||||+++|+|++|..||......
T Consensus 171 ~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---------------------- 225 (303)
T 3a7i_A 171 DTQ---IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM---------------------- 225 (303)
T ss_dssp TTB---CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----------------------
T ss_pred ccc---cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH----------------------
Confidence 432 1223346889999999999999999999999999999999999999643321
Q ss_pred HHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHH
Q 041031 243 KDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHI 296 (313)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~ 296 (313)
+....+.....+. .....+..+.+|+.+||+.||.+|||+.++++...-.
T Consensus 226 -~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~ 275 (303)
T 3a7i_A 226 -KVLFLIPKNNPPT---LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIL 275 (303)
T ss_dssp -HHHHHHHHSCCCC---CCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHH
T ss_pred -HHHHHhhcCCCCC---CccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhh
Confidence 1111111111111 2233456788999999999999999999999865533
No 161
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=5.6e-44 Score=312.66 Aligned_cols=248 Identities=27% Similarity=0.365 Sum_probs=196.8
Q ss_pred HHhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc-----------cHHHHHHHHHHHhc-CCCceeeeeEEEe
Q 041031 9 DATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK-----------SKEFSSELKILCKV-HSNLIELIGYAAG 74 (313)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~-----------~~~~~~e~~~l~~l-h~~i~~~~~~~~~ 74 (313)
...++|.+.+.||+|+||.||+|.+. ++.||||++.... ...+.+|+.+++.+ ||||+++++++..
T Consensus 7 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 86 (322)
T 2ycf_A 7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 86 (322)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES
T ss_pred hhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC
Confidence 45678999999999999999999987 6889999986532 23477899999999 9999999999876
Q ss_pred CCeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCc---EE
Q 041031 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFR---AK 151 (313)
Q Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~---~~ 151 (313)
.+ .++||||+++++|.+++. ....+++..++.++.|++.||.|||+++ ++|+||+|+||+++.++. ++
T Consensus 87 ~~-~~lv~e~~~~~~L~~~~~-----~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~k 157 (322)
T 2ycf_A 87 ED-YYIVLELMEGGELFDKVV-----GNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIK 157 (322)
T ss_dssp SS-EEEEEECCTTEETHHHHS-----TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEE
T ss_pred Cc-eEEEEecCCCCcHHHHHh-----ccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEE
Confidence 65 899999999999999983 4567999999999999999999999999 999999999999987654 99
Q ss_pred EeeccccccccCChhhhhhcccccccccccCCcccc---CCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccc
Q 041031 152 IADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVR---DGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEH 228 (313)
Q Consensus 152 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~---~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~ 228 (313)
|+|||++........ .....+++.|+|||++. ...++.++||||||+++|+|++|..||.......
T Consensus 158 l~Dfg~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------- 226 (322)
T 2ycf_A 158 ITDFGHSKILGETSL----MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV------- 226 (322)
T ss_dssp ECCCTTCEECCCCHH----HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS-------
T ss_pred EccCccceecccccc----cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH-------
Confidence 999999987654322 12235799999999974 4668899999999999999999999997654321
Q ss_pred hhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 041031 229 RSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAI 291 (313)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 291 (313)
.+.. .+...............+..+.+|+.+||+.||.+|||+.++++
T Consensus 227 -~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 227 -SLKD--------------QITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp -CHHH--------------HHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -HHHH--------------HHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 1111 11111000000011123457889999999999999999999984
No 162
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-44 Score=320.94 Aligned_cols=251 Identities=26% Similarity=0.384 Sum_probs=201.3
Q ss_pred hcCccccceeccCCeEEEEEeEE-----CCcceEEEecccc-------ccHHHHHHHHHHHhc--CCCceeeeeEEEeCC
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKL-----RGKNAAIKQMKNT-------KSKEFSSELKILCKV--HSNLIELIGYAAGGD 76 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~-----~~~~~aiK~~~~~-------~~~~~~~e~~~l~~l--h~~i~~~~~~~~~~~ 76 (313)
.++|.+.+.||+|+||.||+|++ .++.||||+++.. ..+.+.+|+++++.+ ||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 47899999999999999999998 3788999998743 234567899999998 999999999999999
Q ss_pred eEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecc
Q 041031 77 SLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFG 156 (313)
Q Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg 156 (313)
..++||||+++++|.+++. ....+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||
T Consensus 133 ~~~lv~e~~~~~~L~~~l~-----~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG 204 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLS-----QRERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFG 204 (355)
T ss_dssp EEEEEECCCCSCBHHHHHH-----HHSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSS
T ss_pred eEEEEeecCCCCCHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCC
Confidence 9999999999999999984 3356899999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCChhhhhhcccccccccccCCccccC--CCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHH
Q 041031 157 LVKLLEHSPEIAAAASRIVGTFGYLAPEYVRD--GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDY 234 (313)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~ 234 (313)
++........ .......+|+.|+|||++.+ ..++.++|||||||++|+|++|..||....... .....
T Consensus 205 ~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~--------~~~~~ 274 (355)
T 1vzo_A 205 LSKEFVADET--ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN--------SQAEI 274 (355)
T ss_dssp EEEECCGGGG--GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC--------CHHHH
T ss_pred CCeecccCCC--CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc--------hHHHH
Confidence 9876543222 22334568999999999986 347889999999999999999999997554321 11111
Q ss_pred HHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCC-----CHHHHHHHHH
Q 041031 235 MLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRP-----DMSNAAIRLS 294 (313)
Q Consensus 235 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-----s~~~ll~~l~ 294 (313)
...+... .+ ......+..+.+|+.+||..||.+|| |+.++++...
T Consensus 275 -----------~~~~~~~-~~---~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~ 324 (355)
T 1vzo_A 275 -----------SRRILKS-EP---PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLF 324 (355)
T ss_dssp -----------HHHHHHC-CC---CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGG
T ss_pred -----------HHHHhcc-CC---CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcc
Confidence 1111111 11 12233456788999999999999999 9999987654
No 163
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.4e-44 Score=317.70 Aligned_cols=249 Identities=24% Similarity=0.347 Sum_probs=194.6
Q ss_pred HhcCccccceeccCCeEEEEEeEEC-CcceEEEeccccc-----cHHHHHHHHHHHhc-C--CCceeeeeEEEeCCeEEE
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR-GKNAAIKQMKNTK-----SKEFSSELKILCKV-H--SNLIELIGYAAGGDSLFL 80 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~-~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h--~~i~~~~~~~~~~~~~~l 80 (313)
...+|++.+.||+|+||.||+|.+. ++.||||.+.... .+.+.+|+.+++.+ | |||+++++++.+.+..++
T Consensus 7 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 86 (343)
T 3dbq_A 7 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 86 (343)
T ss_dssp SSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred ecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence 3467999999999999999999887 7789999986442 34578899999999 5 999999999999999999
Q ss_pred EEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccccc
Q 041031 81 VYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKL 160 (313)
Q Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~ 160 (313)
|||+ .+++|.+++. ....+++..++.++.|++.||.|||+++ ++|+||||+||+++ ++.+||+|||++..
T Consensus 87 v~e~-~~~~L~~~l~-----~~~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a~~ 156 (343)
T 3dbq_A 87 VMEC-GNIDLNSWLK-----KKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQ 156 (343)
T ss_dssp EECC-CSEEHHHHHH-----HSCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCC
T ss_pred EEeC-CCCCHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeecccccc
Confidence 9995 5789999994 3467899999999999999999999999 99999999999997 57899999999987
Q ss_pred ccCChhhhhhcccccccccccCCccccC-----------CCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccch
Q 041031 161 LEHSPEIAAAASRIVGTFGYLAPEYVRD-----------GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHR 229 (313)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~-----------~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~ 229 (313)
....... .......+|+.|+|||++.+ ..++.++|||||||++|+|++|..||......
T Consensus 157 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--------- 226 (343)
T 3dbq_A 157 MQPDTTS-VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ--------- 226 (343)
T ss_dssp C-------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH---------
T ss_pred cCccccc-ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH---------
Confidence 6543221 12233468999999999865 66888999999999999999999999643221
Q ss_pred hHHHHHHHHhcCcHHHHHHhhhhcCCCCCC-CCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 041031 230 SLVDYMLAVFNDTKDFMAKLTECLDPNLTR-YHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLS 294 (313)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~ 294 (313)
...+...+++.... .....+..+.+|+.+||+.||.+|||+.++++.-+
T Consensus 227 ----------------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~ 276 (343)
T 3dbq_A 227 ----------------ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 276 (343)
T ss_dssp ----------------HHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred ----------------HHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcc
Confidence 11112222222111 22233456889999999999999999999987644
No 164
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=5e-44 Score=311.50 Aligned_cols=238 Identities=23% Similarity=0.290 Sum_probs=188.4
Q ss_pred cCccccceeccCCeEEEEEeEEC--CcceEEEeccccc-----cHHHHHHHHHHHhc--CCCceeeeeEEEeCCeEEEEE
Q 041031 12 SNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK-----SKEFSSELKILCKV--HSNLIELIGYAAGGDSLFLVY 82 (313)
Q Consensus 12 ~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~-----~~~~~~e~~~l~~l--h~~i~~~~~~~~~~~~~~lv~ 82 (313)
++|++.++||+|+||.||+|.+. ++.||||++.... ......|+..+..+ ||||+++++++.+.+..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 67999999999999999999997 8899999876432 22234455555554 999999999999999999999
Q ss_pred eecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccccccc
Q 041031 83 EYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLE 162 (313)
Q Consensus 83 e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~ 162 (313)
|++ +++|.+++. .....+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||++....
T Consensus 137 e~~-~~~L~~~~~----~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~ 208 (311)
T 3p1a_A 137 ELC-GPSLQQHCE----AWGASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208 (311)
T ss_dssp ECC-CCBHHHHHH----HHCSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred ecc-CCCHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence 999 678988874 33456999999999999999999999999 9999999999999999999999999987654
Q ss_pred CChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcCc
Q 041031 163 HSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDT 242 (313)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (313)
... ......+|+.|+|||++.+ .++.++||||||+++|+|++|..|+.....
T Consensus 209 ~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~----------------------- 260 (311)
T 3p1a_A 209 TAG----AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG----------------------- 260 (311)
T ss_dssp ----------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH-----------------------
T ss_pred cCC----CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH-----------------------
Confidence 332 2223468999999999886 689999999999999999999766542211
Q ss_pred HHHHHHhhhhcCCCCCC-CCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 041031 243 KDFMAKLTECLDPNLTR-YHKDSMLQMALLSKDCVDENWKRRPDMSNAAI 291 (313)
Q Consensus 243 ~~~~~~l~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 291 (313)
...+. ...... .....+..+.+++.+||+.||++|||+.++++
T Consensus 261 ---~~~~~---~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 261 ---WQQLR---QGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp ---HHHHT---TTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---HHHHh---ccCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 00110 000000 11223467889999999999999999999986
No 165
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.4e-43 Score=308.97 Aligned_cols=250 Identities=26% Similarity=0.401 Sum_probs=200.5
Q ss_pred HHhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc-cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEee
Q 041031 9 DATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK-SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYEY 84 (313)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~-~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e~ 84 (313)
...++|.+.+.||+|+||.||+|.+. ++.||+|.+.... ...+.+|+.+++.+ ||||+++++++...+..++||||
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 105 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY 105 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeec
Confidence 45678999999999999999999987 7889999987553 56788999999999 99999999999999999999999
Q ss_pred cCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccccCC
Q 041031 85 AQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHS 164 (313)
Q Consensus 85 ~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~~~ 164 (313)
+++++|.+++. .....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+......
T Consensus 106 ~~~~~L~~~~~----~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (314)
T 3com_A 106 CGAGSVSDIIR----LRNKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT 178 (314)
T ss_dssp CTTEEHHHHHH----HHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECBTT
T ss_pred CCCCCHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhhhhh
Confidence 99999999984 23467899999999999999999999999 999999999999999999999999998765432
Q ss_pred hhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcCcHH
Q 041031 165 PEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKD 244 (313)
Q Consensus 165 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (313)
.. ......+++.|+|||++.+..++.++||||||+++|+|++|..||...... .
T Consensus 179 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----------------------~ 232 (314)
T 3com_A 179 MA---KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM-----------------------R 232 (314)
T ss_dssp BS---CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-----------------------H
T ss_pred cc---ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH-----------------------H
Confidence 21 223346889999999999989999999999999999999999999643321 0
Q ss_pred HHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 245 FMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 245 ~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
....+.....+.. ......+..+.+|+.+||+.||.+|||+.++++.
T Consensus 233 ~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 233 AIFMIPTNPPPTF-RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp HHHHHHHSCCCCC-SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred HHHHHhcCCCccc-CCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0111111111111 1223345678999999999999999999999863
No 166
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.5e-44 Score=322.85 Aligned_cols=267 Identities=23% Similarity=0.359 Sum_probs=191.5
Q ss_pred HHHhcCccccceeccCCeEEEEEeEEC--CcceEEEecccc-----ccHHHHHHHHHHHhc--CCCceeeeeEEEeCC--
Q 041031 8 RDATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT-----KSKEFSSELKILCKV--HSNLIELIGYAAGGD-- 76 (313)
Q Consensus 8 ~~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~-----~~~~~~~e~~~l~~l--h~~i~~~~~~~~~~~-- 76 (313)
....++|++.+.||+|+||.||+|.+. ++.||||.+... ......+|+.+++.+ ||||+++++++...+
T Consensus 5 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~ 84 (388)
T 3oz6_A 5 RHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDR 84 (388)
T ss_dssp HHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSS
T ss_pred CcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCC
Confidence 456789999999999999999999987 889999988543 234467899999998 999999999997544
Q ss_pred eEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecc
Q 041031 77 SLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFG 156 (313)
Q Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg 156 (313)
.+++||||++ ++|.+++. ...++...+..++.|++.||+|||+.+ |+|+||||+||+++.++.+||+|||
T Consensus 85 ~~~lv~e~~~-~~L~~~~~------~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG 154 (388)
T 3oz6_A 85 DVYLVFDYME-TDLHAVIR------ANILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFG 154 (388)
T ss_dssp CEEEEEECCS-EEHHHHHH------HTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEecccC-cCHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCc
Confidence 7899999996 58998884 246889999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCh------------------hhhhhcccccccccccCCccccC-CCCCCccchhhHHHHHHHHHhCCCCccCC
Q 041031 157 LVKLLEHSP------------------EIAAAASRIVGTFGYLAPEYVRD-GCVTTKSDVYAFGVVLMELITGQQALSRD 217 (313)
Q Consensus 157 ~~~~~~~~~------------------~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~DiwslG~~l~~~~tg~~p~~~~ 217 (313)
++....... ..........+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.
T Consensus 155 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 234 (388)
T 3oz6_A 155 LSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS 234 (388)
T ss_dssp TCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence 997653210 00112223478999999999986 67899999999999999999999999765
Q ss_pred CCCCCCccccchhHHHHHHHHhcCcHH------------HHHHhhhhc---CCCCCCCC-------------HHHHHHHH
Q 041031 218 ANPGNNQYTEHRSLVDYMLAVFNDTKD------------FMAKLTECL---DPNLTRYH-------------KDSMLQMA 269 (313)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~l~~~~---~~~~~~~~-------------~~~~~~l~ 269 (313)
+.. ..+............+ ....+.... ........ ...+..+.
T Consensus 235 ~~~--------~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (388)
T 3oz6_A 235 STM--------NQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEAL 306 (388)
T ss_dssp SHH--------HHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHH
T ss_pred CHH--------HHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHH
Confidence 431 1111111111000000 001111100 00000000 13345788
Q ss_pred HHHhhccccCcCCCCCHHHHHHH
Q 041031 270 LLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 270 ~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
+|+++||..||.+|||+.|+++.
T Consensus 307 dll~~~L~~dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 307 DLLDKLLQFNPNKRISANDALKH 329 (388)
T ss_dssp HHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HHHHHhhccCcccCCCHHHHhCC
Confidence 99999999999999999999976
No 167
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-44 Score=321.53 Aligned_cols=258 Identities=25% Similarity=0.360 Sum_probs=196.5
Q ss_pred CccccceeccCCeEEEEEeEEC-----CcceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEE-eCCeEEEE
Q 041031 13 NFSTSLKIGQGSYGSVYLGKLR-----GKNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAA-GGDSLFLV 81 (313)
Q Consensus 13 ~y~~~~~lg~g~~g~v~~~~~~-----~~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~-~~~~~~lv 81 (313)
.|.+.+.||+|+||.||+|.+. +..+|+|.+.... .+.+.+|+.+++.+ ||||+++++++. ..+..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4677899999999999999875 1358999886532 34577899999999 999999999865 45678999
Q ss_pred EeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccc
Q 041031 82 YEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL 161 (313)
Q Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~ 161 (313)
|||+++++|.+++. .....+++..++.++.|++.||+|||+++ ++|+||||+||+++.++.+||+|||++...
T Consensus 170 ~e~~~~g~L~~~l~----~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 242 (373)
T 3c1x_A 170 LPYMKHGDLRNFIR----NETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDM 242 (373)
T ss_dssp EECCTTCBHHHHHH----CTTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EECCCCCCHHHHHh----hcccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeeccccccc
Confidence 99999999999995 34456889999999999999999999999 999999999999999999999999998765
Q ss_pred cCChhh-hhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchhHHHHHHHHh
Q 041031 162 EHSPEI-AAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLVDYMLAVF 239 (313)
Q Consensus 162 ~~~~~~-~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (313)
...... ........+++.|+|||++.+..++.++||||||+++|+|++ |.+||......
T Consensus 243 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~------------------- 303 (373)
T 3c1x_A 243 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF------------------- 303 (373)
T ss_dssp ---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS-------------------
T ss_pred cccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH-------------------
Confidence 432211 111223456788999999999999999999999999999999 67777655432
Q ss_pred cCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhccccc
Q 041031 240 NDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSKEW 303 (313)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~~ 303 (313)
+....+...... ......+..+.+++.+||+.||.+|||+.++++.|+.+.......
T Consensus 304 ----~~~~~~~~~~~~---~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~ 360 (373)
T 3c1x_A 304 ----DITVYLLQGRRL---LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 360 (373)
T ss_dssp ----CHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred ----HHHHHHHcCCCC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcccc
Confidence 111111111111 112334567899999999999999999999999999998765544
No 168
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=3.3e-43 Score=308.61 Aligned_cols=258 Identities=19% Similarity=0.282 Sum_probs=202.7
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEeccccccHHHHHHHHHHHhc--CCCceeeeeEEEe--CCeEEEEEee
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTKSKEFSSELKILCKV--HSNLIELIGYAAG--GDSLFLVYEY 84 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~~~~~~~e~~~l~~l--h~~i~~~~~~~~~--~~~~~lv~e~ 84 (313)
.++|++.+.||+|+||.||+|.+. ++.||||++.......+.+|+.+++.+ ||||+++++++.+ ....+++||+
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~ 114 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEH 114 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEEC
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEec
Confidence 478999999999999999999886 889999999988888899999999999 9999999999987 6778999999
Q ss_pred cCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCC-cEEEeeccccccccC
Q 041031 85 AQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNF-RAKIADFGLVKLLEH 163 (313)
Q Consensus 85 ~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~-~~~l~dfg~~~~~~~ 163 (313)
+.+++|.+++. .+++..++.++.|++.||+|||+++ ++|+||||+||+++.++ .++|+|||++.....
T Consensus 115 ~~~~~l~~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~ 183 (330)
T 3nsz_A 115 VNNTDFKQLYQ--------TLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183 (330)
T ss_dssp CCCCCHHHHGG--------GCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred cCchhHHHHHH--------hCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence 99999999872 3888999999999999999999999 99999999999999766 899999999986554
Q ss_pred ChhhhhhcccccccccccCCccccC-CCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcCc
Q 041031 164 SPEIAAAASRIVGTFGYLAPEYVRD-GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDT 242 (313)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (313)
.. ......+++.|+|||++.+ ..++.++|||||||++|+|++|..||...... ...+....... . .
T Consensus 184 ~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~-------~~~l~~~~~~~-~-~ 250 (330)
T 3nsz_A 184 GQ----EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-------YDQLVRIAKVL-G-T 250 (330)
T ss_dssp TC----CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH-------HHHHHHHHHHH-C-H
T ss_pred CC----ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch-------HHHHHHHHHhc-C-C
Confidence 32 2233468899999999987 67899999999999999999999999544321 01111111100 0 0
Q ss_pred HHHHHHhhh---------------hcCCCCC-----CCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 243 KDFMAKLTE---------------CLDPNLT-----RYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 243 ~~~~~~l~~---------------~~~~~~~-----~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
.+....+.. ....... ......+..+.+|+.+||+.||.+|||+.|+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 251 EDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp HHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred chhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 011111110 0000000 0122246788999999999999999999999863
No 169
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=5.1e-44 Score=318.23 Aligned_cols=255 Identities=13% Similarity=0.153 Sum_probs=209.4
Q ss_pred hcCccccceeccCCeEEEEEeE-----EC--CcceEEEeccccccHHHHHHHHHHHhc----CCCceeeeeEEEeCCeEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGK-----LR--GKNAAIKQMKNTKSKEFSSELKILCKV----HSNLIELIGYAAGGDSLF 79 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~-----~~--~~~~aiK~~~~~~~~~~~~e~~~l~~l----h~~i~~~~~~~~~~~~~~ 79 (313)
.++|.+.++||+|+||.||+|. .. ++.||||.+.......+..|.++++.+ |+|++++++++...+..+
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~ 143 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSV 143 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEE
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcE
Confidence 4679999999999999999994 22 789999999988888888999988888 899999999999999999
Q ss_pred EEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCC-----------CC
Q 041031 80 LVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDS-----------NF 148 (313)
Q Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~-----------~~ 148 (313)
+||||+++|+|.+++..........+++..++.++.|++.||+|||+++ |+|+||||+||+++. ++
T Consensus 144 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~~~~~~~~ 220 (365)
T 3e7e_A 144 LVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQDDEDDLSA 220 (365)
T ss_dssp EEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC------CT
T ss_pred EEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCccccccccC
Confidence 9999999999999995433224567999999999999999999999999 999999999999988 89
Q ss_pred cEEEeeccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccc
Q 041031 149 RAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEH 228 (313)
Q Consensus 149 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~ 228 (313)
.+||+|||++........ ........+|+.|+|||++.+..++.++|||||||++|+|+||+.||.......
T Consensus 221 ~~kl~DFG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~------- 292 (365)
T 3e7e_A 221 GLALIDLGQSIDMKLFPK-GTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE------- 292 (365)
T ss_dssp TEEECCCTTCEEGGGSCT-TEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-------
T ss_pred CEEEeeCchhhhhhccCC-CceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc-------
Confidence 999999999975442211 122334568999999999999999999999999999999999999996543310
Q ss_pred hhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCC-CCHHHHHHHHHHHHhcc
Q 041031 229 RSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRR-PDMSNAAIRLSHILISS 300 (313)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~R-ps~~~ll~~l~~~~~~~ 300 (313)
..+....... .....+.+++..||+.+|.+| |+++++.+.|+.+....
T Consensus 293 ----------------------~~~~~~~~~~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~ 341 (365)
T 3e7e_A 293 ----------------------CKPEGLFRRL--PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQH 341 (365)
T ss_dssp ----------------------EEECSCCTTC--SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred ----------------------eeechhcccc--CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence 0011111111 224467789999999999998 57888899999887763
No 170
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=3.1e-44 Score=313.34 Aligned_cols=265 Identities=19% Similarity=0.292 Sum_probs=196.7
Q ss_pred hcCcccc-ceeccCCeEEEEEeEEC--CcceEEEeccccc---cHHHHHHHHHHHhc--CCCceeeeeEEEeCCeEEEEE
Q 041031 11 TSNFSTS-LKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK---SKEFSSELKILCKV--HSNLIELIGYAAGGDSLFLVY 82 (313)
Q Consensus 11 ~~~y~~~-~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~---~~~~~~e~~~l~~l--h~~i~~~~~~~~~~~~~~lv~ 82 (313)
.+.|.+. +.||+|+||.||+|.+. ++.||||++.... ...+.+|+.++.++ ||||+++++++.+.+..++||
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 4678885 78999999999999876 8899999986543 45688999999985 999999999999999999999
Q ss_pred eecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCc---EEEeeccccc
Q 041031 83 EYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFR---AKIADFGLVK 159 (313)
Q Consensus 83 e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~---~~l~dfg~~~ 159 (313)
||+++++|.+++. ....+++..++.++.|++.||+|||+++ ++|+||||+||+++.++. ++|+|||++.
T Consensus 91 e~~~~~~L~~~l~-----~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~ 162 (316)
T 2ac3_A 91 EKMRGGSILSHIH-----KRRHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGS 162 (316)
T ss_dssp ECCTTCBHHHHHH-----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC
T ss_pred EcCCCCcHHHHHh-----ccCCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCcc
Confidence 9999999999984 3456899999999999999999999999 999999999999988765 9999999987
Q ss_pred cccCChhh----hhhcccccccccccCCccccC-----CCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchh
Q 041031 160 LLEHSPEI----AAAASRIVGTFGYLAPEYVRD-----GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRS 230 (313)
Q Consensus 160 ~~~~~~~~----~~~~~~~~~~~~~~aPE~~~~-----~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~ 230 (313)
........ ........+++.|+|||++.+ ..++.++|||||||++|+|++|..||............. ..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~-~~ 241 (316)
T 2ac3_A 163 GIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRG-EA 241 (316)
T ss_dssp -------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC-----C
T ss_pred ccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccccccc-cc
Confidence 65422111 111122458999999999975 457899999999999999999999998765433111110 00
Q ss_pred HHHHHHHHhcCcHHHHHHhhhhcCCCCCC-CCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 231 LVDYMLAVFNDTKDFMAKLTECLDPNLTR-YHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
..... ......+.... ..... .....+..+.+|+.+||+.||.+|||+.|+++.
T Consensus 242 ~~~~~-------~~~~~~i~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 242 CPACQ-------NMLFESIQEGK-YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp CHHHH-------HHHHHHHHHCC-CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred chhHH-------HHHHHHHhccC-cccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 00000 00111111110 00000 011234678899999999999999999999874
No 171
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1e-43 Score=314.57 Aligned_cols=266 Identities=22% Similarity=0.317 Sum_probs=197.3
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEe-------
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAG------- 74 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~------- 74 (313)
..++|++.+.||+|+||.||+|.+. ++.||||.+.... ...+.+|+.+++.+ ||||+++++++..
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp BGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred cccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 3578999999999999999999986 7899999886433 34577899999999 9999999999976
Q ss_pred -CCeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEe
Q 041031 75 -GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIA 153 (313)
Q Consensus 75 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~ 153 (313)
.+..++||||+++ +|.+.+. .....+++..++.++.|++.||+|||+++ ++|+||||+||+++.++.++|+
T Consensus 95 ~~~~~~lv~e~~~~-~l~~~l~----~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~ 166 (351)
T 3mi9_A 95 CKGSIYLVFDFCEH-DLAGLLS----NVLVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLA 166 (351)
T ss_dssp --CEEEEEEECCSE-EHHHHHH----CTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEEC
T ss_pred CCceEEEEEeccCC-CHHHHHh----hccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEc
Confidence 4568999999965 7777764 33456999999999999999999999999 9999999999999999999999
Q ss_pred eccccccccCChhh-hhhcccccccccccCCccccC-CCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhH
Q 041031 154 DFGLVKLLEHSPEI-AAAASRIVGTFGYLAPEYVRD-GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSL 231 (313)
Q Consensus 154 dfg~~~~~~~~~~~-~~~~~~~~~~~~~~aPE~~~~-~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~ 231 (313)
|||++......... ........+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.... ..
T Consensus 167 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---------~~ 237 (351)
T 3mi9_A 167 DFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ---------HQ 237 (351)
T ss_dssp CCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---------HH
T ss_pred cchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChH---------HH
Confidence 99998865432211 122233467999999999976 45799999999999999999999999765431 11
Q ss_pred HHHHHHHhcC-cHHHHHHh-----hhhcCCCCCC-CC-H------HHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 232 VDYMLAVFND-TKDFMAKL-----TECLDPNLTR-YH-K------DSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 232 ~~~~~~~~~~-~~~~~~~l-----~~~~~~~~~~-~~-~------~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
...+...... ..+..... ...+...... .. . ..+..+.+|+.+||+.||++|||+.|+++.
T Consensus 238 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 238 LALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp HHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 1111110000 00000000 0000000000 00 0 013458899999999999999999999964
No 172
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1e-44 Score=312.51 Aligned_cols=258 Identities=26% Similarity=0.372 Sum_probs=196.9
Q ss_pred hcCccccceeccCCeEEEEEeEEC---Cc--ceEEEeccccc------cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR---GK--NAAIKQMKNTK------SKEFSSELKILCKV-HSNLIELIGYAAGGDSL 78 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~---~~--~~aiK~~~~~~------~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~ 78 (313)
.++|++.+.||+|+||.||+|.+. ++ .||||+++... .+.+.+|+++++.+ ||||+++++++.... .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 468999999999999999999864 22 58999987532 34577899999999 999999999998765 8
Q ss_pred EEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccc
Q 041031 79 FLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLV 158 (313)
Q Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~ 158 (313)
++|+|++.+++|.+++. .....+++..++.++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||++
T Consensus 96 ~~v~e~~~~~~L~~~l~----~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~ 168 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLR----KHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLM 168 (291)
T ss_dssp EEEEECCTTCBHHHHHH----HHGGGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred eeeEecccCCCHHHHHH----hccCCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEcccccc
Confidence 89999999999999985 22356899999999999999999999999 999999999999999999999999998
Q ss_pred ccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchhHHHHHHH
Q 041031 159 KLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLVDYMLA 237 (313)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 237 (313)
.................+++.|+|||++.+..++.++||||||+++|+|++ |..||......
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~----------------- 231 (291)
T 1u46_A 169 RALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS----------------- 231 (291)
T ss_dssp EECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----------------
T ss_pred ccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH-----------------
Confidence 876543322222233456788999999998889999999999999999999 99999654321
Q ss_pred HhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhccc
Q 041031 238 VFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSK 301 (313)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~ 301 (313)
+....+.... .........+..+.+++.+||+.||.+|||+.++++.|+++.....
T Consensus 232 ------~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 287 (291)
T 1u46_A 232 ------QILHKIDKEG--ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDM 287 (291)
T ss_dssp ------HHHHHHHTSC--CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred ------HHHHHHHccC--CCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccch
Confidence 1111111110 0111233456789999999999999999999999999998876543
No 173
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.6e-44 Score=315.23 Aligned_cols=266 Identities=20% Similarity=0.266 Sum_probs=204.9
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc---cHHHHHHHHHHHhc-CCCceeeeeEEE----eCCeEEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK---SKEFSSELKILCKV-HSNLIELIGYAA----GGDSLFL 80 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~---~~~~~~e~~~l~~l-h~~i~~~~~~~~----~~~~~~l 80 (313)
.++|++.+.||+|+||.||+|.+. ++.||||.+.... .+.+.+|+.+++.+ ||||+++++++. .....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 468999999999999999999985 8899999886443 44578999999999 999999999986 3447899
Q ss_pred EEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccccc
Q 041031 81 VYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKL 160 (313)
Q Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~ 160 (313)
||||+.+++|.+++.... .....+++..++.++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||.+..
T Consensus 108 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLK-DKGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEECCTTCBHHHHHHHHH-TTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEeCCCCcHHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 999999999999885321 13567899999999999999999999999 99999999999999999999999998776
Q ss_pred ccCChhh------hhhcccccccccccCCccccCCC---CCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhH
Q 041031 161 LEHSPEI------AAAASRIVGTFGYLAPEYVRDGC---VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSL 231 (313)
Q Consensus 161 ~~~~~~~------~~~~~~~~~~~~~~aPE~~~~~~---~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~ 231 (313)
....... ........+++.|+|||++.+.. ++.++||||||+++|+|++|..||....... .
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-------~-- 254 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG-------D-- 254 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT-------S--
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc-------c--
Confidence 4321110 01112235689999999997654 6889999999999999999999995321100 0
Q ss_pred HHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcccccc
Q 041031 232 VDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSKEWE 304 (313)
Q Consensus 232 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~~~ 304 (313)
.....+..... .......+..+.+++.+||+.||.+|||+.++++.|+.+....+..+
T Consensus 255 ------------~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~~~ 312 (317)
T 2buj_A 255 ------------SVALAVQNQLS---IPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQH 312 (317)
T ss_dssp ------------CHHHHHHCC-----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC--
T ss_pred ------------hhhHHhhccCC---CCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCCCC
Confidence 00111111000 01123345678999999999999999999999999999987766543
No 174
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.5e-44 Score=329.88 Aligned_cols=244 Identities=25% Similarity=0.342 Sum_probs=194.7
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEecccc------ccHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEE
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT------KSKEFSSELKILCKV-HSNLIELIGYAAGGDSLFL 80 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~------~~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~l 80 (313)
..++|++.+.||+|+||.||+|.+. ++.||||++... ....+.+|+.+++.+ ||||+++++++.+.+.+++
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 3478999999999999999999987 789999998643 234466788888888 9999999999999999999
Q ss_pred EEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhc-CCCCceEEeccCCCCeeeCCCCcEEEeeccccc
Q 041031 81 VYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ-YTKPYYVHRDVKTSNILLDSNFRAKIADFGLVK 159 (313)
Q Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~ 159 (313)
||||+++++|.+++. ....+++..++.++.|++.||+|||+ .+ |+|+||||+||+++.++.+||+|||++.
T Consensus 226 v~e~~~~~~L~~~l~-----~~~~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~ 297 (446)
T 4ejn_A 226 VMEYANGGELFFHLS-----RERVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCK 297 (446)
T ss_dssp EECCCSSCBHHHHHH-----HHSCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCC
T ss_pred EEeeCCCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCce
Confidence 999999999999984 34578999999999999999999998 89 9999999999999999999999999987
Q ss_pred cccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHh
Q 041031 160 LLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF 239 (313)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (313)
...... .......+|+.|+|||++.+..++.++|||||||++|+|++|..||......
T Consensus 298 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------------------- 355 (446)
T 4ejn_A 298 EGIKDG---ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE------------------- 355 (446)
T ss_dssp TTCC--------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------------------
T ss_pred eccCCC---cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH-------------------
Confidence 543322 1233457899999999999999999999999999999999999999654321
Q ss_pred cCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCC-----CHHHHHH
Q 041031 240 NDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRP-----DMSNAAI 291 (313)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-----s~~~ll~ 291 (313)
+....+... ... .....+..+.+|+.+||+.||.+|| |+.|+++
T Consensus 356 ----~~~~~i~~~-~~~---~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 356 ----KLFELILME-EIR---FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp ----HHHHHHHHC-CCC---CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ----HHHHHHHhC-CCC---CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 111111111 111 1233456788999999999999999 9999985
No 175
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=3.1e-44 Score=315.59 Aligned_cols=264 Identities=22% Similarity=0.360 Sum_probs=210.4
Q ss_pred HHHhcCccccceeccCCeEEEEEeEECC-------cceEEEeccccc----cHHHHHHHHHHHhc--CCCceeeeeEEEe
Q 041031 8 RDATSNFSTSLKIGQGSYGSVYLGKLRG-------KNAAIKQMKNTK----SKEFSSELKILCKV--HSNLIELIGYAAG 74 (313)
Q Consensus 8 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~-------~~~aiK~~~~~~----~~~~~~e~~~l~~l--h~~i~~~~~~~~~ 74 (313)
+...++|.+.+.||+|+||.||+|.+.+ ..+|+|.+.... .+.+.+|+.+++.+ ||||+++++++.+
T Consensus 42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 121 (333)
T 2i1m_A 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH 121 (333)
T ss_dssp BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence 3345789999999999999999999862 369999987653 34578999999999 9999999999999
Q ss_pred CCeEEEEEeecCCCChhhhhcCCCC---------CCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeC
Q 041031 75 GDSLFLVYEYAQNGALSDHLHWPSV---------KGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLD 145 (313)
Q Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~~~~---------~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~ 145 (313)
.+..++||||+++++|.+++..... .....++...++.++.|++.||.|||+++ ++|+||||+||+++
T Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~ 198 (333)
T 2i1m_A 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLT 198 (333)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCEEE
T ss_pred CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEEEC
Confidence 9999999999999999999842210 01346789999999999999999999999 99999999999999
Q ss_pred CCCcEEEeeccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCc
Q 041031 146 SNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQ 224 (313)
Q Consensus 146 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~ 224 (313)
.++.++|+|||++......... .......+++.|+|||++.+..++.++||||||+++|+|+| |..||.......
T Consensus 199 ~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--- 274 (333)
T 2i1m_A 199 NGHVAKIGDFGLARDIMNDSNY-IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS--- 274 (333)
T ss_dssp GGGEEEBCCCGGGCCGGGCTTS-EECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH---
T ss_pred CCCeEEECccccccccccccce-eecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH---
Confidence 9999999999998865433221 12223456788999999999899999999999999999998 999997654320
Q ss_pred cccchhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcc
Q 041031 225 YTEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISS 300 (313)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 300 (313)
.....+....... .....+..+.+++.+||+.||.+|||+.++++.|+.+..+.
T Consensus 275 -------------------~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 328 (333)
T 2i1m_A 275 -------------------KFYKLVKDGYQMA---QPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328 (333)
T ss_dssp -------------------HHHHHHHHTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -------------------HHHHHHhcCCCCC---CCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence 1111222211111 12233567889999999999999999999999999887653
No 176
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=4.5e-44 Score=316.40 Aligned_cols=244 Identities=28% Similarity=0.410 Sum_probs=198.7
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc------cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK------SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLV 81 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~------~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv 81 (313)
.+.|.+.+.||+|+||.||+|.+. ++.||||.+.... ...+.+|+.+++.+ ||||+++++++...+..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 355999999999999999999975 8889999986432 24577899999999 99999999999999999999
Q ss_pred EeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccc
Q 041031 82 YEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL 161 (313)
Q Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~ 161 (313)
|||+. |+|.+++. .....+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||++...
T Consensus 133 ~e~~~-g~l~~~l~----~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 204 (348)
T 1u5q_A 133 MEYCL-GSASDLLE----VHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM 204 (348)
T ss_dssp EECCS-EEHHHHHH----HHTSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSS
T ss_pred EecCC-CCHHHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceec
Confidence 99996 68888774 23467899999999999999999999999 999999999999999999999999998765
Q ss_pred cCChhhhhhcccccccccccCCcccc---CCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHH
Q 041031 162 EHSPEIAAAASRIVGTFGYLAPEYVR---DGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238 (313)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~aPE~~~---~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (313)
... ....+|+.|+|||++. +..++.++|||||||++|+|++|..||......
T Consensus 205 ~~~-------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~------------------ 259 (348)
T 1u5q_A 205 APA-------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM------------------ 259 (348)
T ss_dssp SSB-------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------------------
T ss_pred CCC-------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH------------------
Confidence 432 2346899999999985 567899999999999999999999999654321
Q ss_pred hcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 041031 239 FNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLS 294 (313)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~ 294 (313)
+....+.....+.. .....+..+.+|+.+||+.||++|||+.++++...
T Consensus 260 -----~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~ 308 (348)
T 1u5q_A 260 -----SALYHIAQNESPAL--QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 308 (348)
T ss_dssp -----HHHHHHHHSCCCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHH
T ss_pred -----HHHHHHHhcCCCCC--CCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChh
Confidence 11111111111111 12334567889999999999999999999986544
No 177
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=4.5e-44 Score=332.42 Aligned_cols=250 Identities=26% Similarity=0.345 Sum_probs=204.6
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEecccc------ccHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEE
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT------KSKEFSSELKILCKV-HSNLIELIGYAAGGDSLFL 80 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~------~~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~l 80 (313)
..++|.+.+.||+|+||.||+|.+. ++.||+|++... ....+.+|+++++.+ ||||+++++++.+.+.+++
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 4577999999999999999999986 889999998643 244577899999999 9999999999999999999
Q ss_pred EEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccccc
Q 041031 81 VYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKL 160 (313)
Q Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~ 160 (313)
||||++||+|.+++... ....+++..++.++.|++.||.|||+++ |+|+||||+||+++.+|.+||+|||++..
T Consensus 262 VmEy~~gg~L~~~l~~~---~~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~ 335 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHM---GQAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVH 335 (576)
T ss_dssp EECCCCSCBHHHHHHSS---SSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEcCCCCcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEeccccee
Confidence 99999999999998522 2345899999999999999999999999 99999999999999999999999999987
Q ss_pred ccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhc
Q 041031 161 LEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240 (313)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (313)
..... ......+|+.|+|||++.+..++.++|||||||++|+|++|..||....... ...
T Consensus 336 ~~~~~----~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~-----~~~----------- 395 (576)
T 2acx_A 336 VPEGQ----TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-----KRE----------- 395 (576)
T ss_dssp CCTTC----CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC-----CHH-----------
T ss_pred cccCc----cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch-----hHH-----------
Confidence 65332 2223478999999999999999999999999999999999999997654321 000
Q ss_pred CcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCC-----CHHHHHHH
Q 041031 241 DTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRP-----DMSNAAIR 292 (313)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-----s~~~ll~~ 292 (313)
+....+... ... .....+..+.+|+.+||+.||.+|| ++.|+++.
T Consensus 396 ---~i~~~i~~~-~~~---~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 396 ---EVERLVKEV-PEE---YSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp ---HHHHHHHHC-CCC---CCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred ---HHHHHhhcc-ccc---CCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 111111111 111 1234456788999999999999999 78888753
No 178
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.4e-44 Score=322.09 Aligned_cols=246 Identities=26% Similarity=0.364 Sum_probs=193.4
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc------cHHHHHHHHH-HHhc-CCCceeeeeEEEeCCeEE
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK------SKEFSSELKI-LCKV-HSNLIELIGYAAGGDSLF 79 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~------~~~~~~e~~~-l~~l-h~~i~~~~~~~~~~~~~~ 79 (313)
..++|++++.||+|+||.||+|+++ ++.||+|++.... ...+..|..+ ++.+ ||||+++++++.+.+.++
T Consensus 36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~ 115 (373)
T 2r5t_A 36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY 115 (373)
T ss_dssp CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence 3578999999999999999999987 6789999987543 2234556555 3445 999999999999999999
Q ss_pred EEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccc
Q 041031 80 LVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVK 159 (313)
Q Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~ 159 (313)
+||||+++|+|.+++. ....+++..++.++.|++.||.|||+++ ++|+||||+||+++.+|.+||+|||++.
T Consensus 116 lv~E~~~gg~L~~~l~-----~~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~ 187 (373)
T 2r5t_A 116 FVLDYINGGELFYHLQ-----RERCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCK 187 (373)
T ss_dssp EEEECCCSCBHHHHHH-----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCG
T ss_pred EEEeCCCCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCcccc
Confidence 9999999999999984 3456889999999999999999999999 9999999999999999999999999987
Q ss_pred cccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHh
Q 041031 160 LLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF 239 (313)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (313)
...... .......+|+.|+|||++.+..++.++|+|||||++|+|++|..||......
T Consensus 188 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~------------------- 245 (373)
T 2r5t_A 188 ENIEHN---STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA------------------- 245 (373)
T ss_dssp GGBCCC---CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH-------------------
T ss_pred ccccCC---CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH-------------------
Confidence 533221 1233457899999999999999999999999999999999999999754321
Q ss_pred cCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHH
Q 041031 240 NDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRL 293 (313)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l 293 (313)
+....+... .+ ......+..+.+|+.+||+.||.+||++.+.++.+
T Consensus 246 ----~~~~~i~~~---~~-~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i 291 (373)
T 2r5t_A 246 ----EMYDNILNK---PL-QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEI 291 (373)
T ss_dssp ----HHHHHHHHS---CC-CCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHH
T ss_pred ----HHHHHHHhc---cc-CCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHH
Confidence 111111111 11 11223456788999999999999999986444333
No 179
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=6.4e-44 Score=320.13 Aligned_cols=246 Identities=24% Similarity=0.353 Sum_probs=193.2
Q ss_pred cCccccceeccCCeEEEEEeEEC-CcceEEEeccccc-----cHHHHHHHHHHHhc---CCCceeeeeEEEeCCeEEEEE
Q 041031 12 SNFSTSLKIGQGSYGSVYLGKLR-GKNAAIKQMKNTK-----SKEFSSELKILCKV---HSNLIELIGYAAGGDSLFLVY 82 (313)
Q Consensus 12 ~~y~~~~~lg~g~~g~v~~~~~~-~~~~aiK~~~~~~-----~~~~~~e~~~l~~l---h~~i~~~~~~~~~~~~~~lv~ 82 (313)
.+|.+.+.||+|+||.||+|.+. ++.||||++.... .+.+.+|+.+++.+ ||||+++++++...+.+++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 45999999999999999999887 7889999986542 34578999999999 499999999999999999999
Q ss_pred eecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccccccc
Q 041031 83 EYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLE 162 (313)
Q Consensus 83 e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~ 162 (313)
| +.+++|.+++. ....+++..++.++.|++.||.|||+++ |+|+||||+||+++ ++.+||+|||++....
T Consensus 136 E-~~~~~L~~~l~-----~~~~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 136 E-CGNIDLNSWLK-----KKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp E-CCSEEHHHHHH-----HCSSCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred e-cCCCCHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 9 55889999984 3457888899999999999999999999 99999999999995 5789999999998765
Q ss_pred CChhhhhhcccccccccccCCccccC-----------CCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhH
Q 041031 163 HSPEIAAAASRIVGTFGYLAPEYVRD-----------GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSL 231 (313)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~aPE~~~~-----------~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~ 231 (313)
..... .......+|+.|+|||++.+ ..++.++|||||||++|+|++|..||......
T Consensus 206 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~----------- 273 (390)
T 2zmd_A 206 PDTTS-VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ----------- 273 (390)
T ss_dssp ---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-----------
T ss_pred CCCcc-ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH-----------
Confidence 33211 12233468999999999975 36888999999999999999999999643221
Q ss_pred HHHHHHHhcCcHHHHHHhhhhcCCCCCC-CCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHH
Q 041031 232 VDYMLAVFNDTKDFMAKLTECLDPNLTR-YHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRL 293 (313)
Q Consensus 232 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l 293 (313)
...+...+++.... .....+..+.+|+.+||+.||.+|||+.|+++.-
T Consensus 274 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp 322 (390)
T 2zmd_A 274 --------------ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 322 (390)
T ss_dssp --------------HHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred --------------HHHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCc
Confidence 11111222222111 1222245788999999999999999999998653
No 180
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=7.1e-44 Score=326.38 Aligned_cols=260 Identities=22% Similarity=0.287 Sum_probs=194.4
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEecccc-----ccHHHHHHHHHHHhc-CCCceeeeeEEEeC------
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT-----KSKEFSSELKILCKV-HSNLIELIGYAAGG------ 75 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~-----~~~~~~~e~~~l~~l-h~~i~~~~~~~~~~------ 75 (313)
..++|+++++||+|+||.||+|.+. ++.||||++... ....+.+|+.+++.+ ||||+++++++...
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 3578999999999999999999987 788999998643 244577899999999 99999999999654
Q ss_pred CeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeec
Q 041031 76 DSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADF 155 (313)
Q Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df 155 (313)
..+++||||+++ +|.+.+. ..+++..++.++.|++.||+|||+.+ |+|+||||+||+++.++.+||+||
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~-------~~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DF 208 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQ-------MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDF 208 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHT-------SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC
T ss_pred CeEEEEEeCCCC-CHHHHHh-------hcCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEE
Confidence 467999999965 5666662 24889999999999999999999999 999999999999999999999999
Q ss_pred cccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHH
Q 041031 156 GLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYM 235 (313)
Q Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 235 (313)
|++...... .......+|+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.. ..+....
T Consensus 209 G~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~--------~~~~~i~ 276 (464)
T 3ttj_A 209 GLARTAGTS----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI--------DQWNKVI 276 (464)
T ss_dssp CCC-----C----CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHH
T ss_pred EeeeecCCC----cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHH
Confidence 999865432 1223346899999999999999999999999999999999999999765431 1111111
Q ss_pred HHHhcCcHHHHHHh----hhhcC--CCCC-----------------CCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 236 LAVFNDTKDFMAKL----TECLD--PNLT-----------------RYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 236 ~~~~~~~~~~~~~l----~~~~~--~~~~-----------------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
.......+++...+ ...+. +... ......+..+.+|+.+||..||.+|||+.|+++.
T Consensus 277 ~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 277 EQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 11111111111111 00010 0000 0111225678999999999999999999999964
No 181
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=3.7e-44 Score=314.77 Aligned_cols=265 Identities=20% Similarity=0.304 Sum_probs=192.7
Q ss_pred HHHHhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeE
Q 041031 7 VRDATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAGGDSL 78 (313)
Q Consensus 7 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~ 78 (313)
-....++|++.++||+|+||.||+|.+. ++.||||++.... ...+.+|+.+++.+ ||||+++++++.+.+..
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (329)
T 3gbz_A 29 SATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRL 108 (329)
T ss_dssp ---CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEE
T ss_pred cccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEE
Confidence 3456789999999999999999999887 8889999997543 23466899999999 99999999999999999
Q ss_pred EEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeC-----CCCcEEEe
Q 041031 79 FLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLD-----SNFRAKIA 153 (313)
Q Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~-----~~~~~~l~ 153 (313)
++||||++ ++|.+++. ....+++..++.++.|++.||+|||+++ ++|+||||+||+++ +++.++|+
T Consensus 109 ~lv~e~~~-~~L~~~~~-----~~~~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~ 179 (329)
T 3gbz_A 109 HLIFEYAE-NDLKKYMD-----KNPDVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIG 179 (329)
T ss_dssp EEEEECCS-EEHHHHHH-----HCTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEEC
T ss_pred EEEEecCC-CCHHHHHh-----hcCCCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEEC
Confidence 99999996 59999984 3456899999999999999999999999 99999999999994 45569999
Q ss_pred eccccccccCChhhhhhcccccccccccCCccccCC-CCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHH
Q 041031 154 DFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG-CVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLV 232 (313)
Q Consensus 154 dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~ 232 (313)
|||++....... .......+|+.|+|||++.+. .++.++|||||||++|+|++|..||...... ..+.
T Consensus 180 Dfg~a~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--------~~~~ 248 (329)
T 3gbz_A 180 DFGLARAFGIPI---RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI--------DQLF 248 (329)
T ss_dssp CTTHHHHHC--------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHH
T ss_pred cCCCccccCCcc---cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH--------HHHH
Confidence 999987654321 122234579999999999874 4899999999999999999999999754331 1111
Q ss_pred HHHHHHh-cCcHHH--HHHhhhhcC--CCCCC------CCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 041031 233 DYMLAVF-NDTKDF--MAKLTECLD--PNLTR------YHKDSMLQMALLSKDCVDENWKRRPDMSNAAI 291 (313)
Q Consensus 233 ~~~~~~~-~~~~~~--~~~l~~~~~--~~~~~------~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 291 (313)
....... +....+ ...+..+.. +.... .....+..+.+|+.+||+.||.+|||+.|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 249 KIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp HHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 1111000 000000 000000000 00000 01113467889999999999999999999986
No 182
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=6.5e-44 Score=312.87 Aligned_cols=261 Identities=23% Similarity=0.364 Sum_probs=205.3
Q ss_pred HhcCccccceeccCCeEEEEEeEEC-------CcceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCe
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR-------GKNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAGGDS 77 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~-------~~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~ 77 (313)
..++|.+.+.||+|+||.||+|.+. +..||||.+.... ...+.+|+.+++.+ ||||+++++++.+...
T Consensus 28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 3578999999999999999999843 5679999996442 34577899999999 9999999999999999
Q ss_pred EEEEEeecCCCChhhhhcCCCC--CCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCC---CCcEEE
Q 041031 78 LFLVYEYAQNGALSDHLHWPSV--KGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDS---NFRAKI 152 (313)
Q Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~--~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~---~~~~~l 152 (313)
.++||||+++++|.+++..... .....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++. +..++|
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEE
Confidence 9999999999999999964331 12245889999999999999999999999 999999999999984 446999
Q ss_pred eeccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchhH
Q 041031 153 ADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSL 231 (313)
Q Consensus 153 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~ 231 (313)
+|||++........ ........+++.|+|||++.+..++.++||||||+++|+|++ |..||......
T Consensus 185 ~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----------- 252 (327)
T 2yfx_A 185 GDFGMARDIYRASY-YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ----------- 252 (327)
T ss_dssp CCCHHHHHHHC-------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----------
T ss_pred Cccccccccccccc-cccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH-----------
Confidence 99999875433221 112223457889999999998899999999999999999998 99999654321
Q ss_pred HHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcc
Q 041031 232 VDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISS 300 (313)
Q Consensus 232 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 300 (313)
+....+...... ......+..+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 253 ------------~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 253 ------------EVLEFVTSGGRM---DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp ------------HHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred ------------HHHHHHhcCCCC---CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 112222211111 123345567889999999999999999999999999887653
No 183
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=4.6e-44 Score=338.82 Aligned_cols=247 Identities=26% Similarity=0.404 Sum_probs=199.0
Q ss_pred ceeccCCeEEEEEeEEC----CcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEeecCC
Q 041031 18 LKIGQGSYGSVYLGKLR----GKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYEYAQN 87 (313)
Q Consensus 18 ~~lg~g~~g~v~~~~~~----~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e~~~~ 87 (313)
++||+|+||.||+|.+. ++.||||+++... .+.+.+|+++++.+ ||||+++++++... ..++||||+.+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CEEEEEEccCC
Confidence 47999999999999663 5679999997543 35688999999999 99999999999754 58899999999
Q ss_pred CChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccccCChhh
Q 041031 88 GALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEI 167 (313)
Q Consensus 88 ~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 167 (313)
|+|.+++. ....+++..++.++.|++.||+|||+++ |+|+||||+||+++.++.+||+|||++.........
T Consensus 454 g~L~~~l~-----~~~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 525 (635)
T 4fl3_A 454 GPLNKYLQ-----QNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525 (635)
T ss_dssp EEHHHHHH-----HCTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred CCHHHHHh-----hCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence 99999994 3466899999999999999999999999 999999999999999999999999999876543332
Q ss_pred hhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchhHHHHHHHHhcCcHHHH
Q 041031 168 AAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDFM 246 (313)
Q Consensus 168 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (313)
........+++.|+|||++.+..++.++||||||+++|+|++ |..||.+.... +..
T Consensus 526 ~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-----------------------~~~ 582 (635)
T 4fl3_A 526 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-----------------------EVT 582 (635)
T ss_dssp ---------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----------------------HHH
T ss_pred cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----------------------HHH
Confidence 222233346788999999999999999999999999999998 99999765431 222
Q ss_pred HHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhc
Q 041031 247 AKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILIS 299 (313)
Q Consensus 247 ~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 299 (313)
..+...... .....++..+.+|+.+||+.||++|||+.+|+++|+.+..+
T Consensus 583 ~~i~~~~~~---~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 632 (635)
T 4fl3_A 583 AMLEKGERM---GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 632 (635)
T ss_dssp HHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred HHHHcCCCC---CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence 222222211 12345567899999999999999999999999999988765
No 184
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.5e-44 Score=314.27 Aligned_cols=269 Identities=24% Similarity=0.304 Sum_probs=195.9
Q ss_pred HHHHHhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc--------cHHHHHHHHHHHhc-CCCceeeeeEEEe
Q 041031 6 EVRDATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK--------SKEFSSELKILCKV-HSNLIELIGYAAG 74 (313)
Q Consensus 6 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~--------~~~~~~e~~~l~~l-h~~i~~~~~~~~~ 74 (313)
++....++|++.+.||+|+||.||+|.+. ++.||||.+.... ...+.+|+.+++.+ ||||+++++++.+
T Consensus 4 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 83 (346)
T 1ua2_A 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH 83 (346)
T ss_dssp ---------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred hhHHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEee
Confidence 35567789999999999999999999987 7889999987432 23577899999999 9999999999999
Q ss_pred CCeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEee
Q 041031 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIAD 154 (313)
Q Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~d 154 (313)
.+..++||||+++ +|.+++. .....+++..++.++.|++.||+|||+++ ++|+||||+||+++.++.+||+|
T Consensus 84 ~~~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~D 155 (346)
T 1ua2_A 84 KSNISLVFDFMET-DLEVIIK----DNSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLAD 155 (346)
T ss_dssp TTCCEEEEECCSE-EHHHHHT----TCCSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC
T ss_pred CCceEEEEEcCCC-CHHHHHH----hcCcCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEe
Confidence 9999999999975 8888884 33456888999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCChhhhhhcccccccccccCCccccCC-CCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHH
Q 041031 155 FGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG-CVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVD 233 (313)
Q Consensus 155 fg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~ 233 (313)
||++....... .......+|+.|+|||++.+. .++.++|||||||++|+|++|.+||.+.... ..+..
T Consensus 156 fg~a~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~--------~~~~~ 224 (346)
T 1ua2_A 156 FGLAKSFGSPN---RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL--------DQLTR 224 (346)
T ss_dssp CGGGSTTTSCC---CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHH
T ss_pred cccceeccCCc---ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH--------HHHHH
Confidence 99988654322 122234679999999999764 5889999999999999999999999765431 11111
Q ss_pred HHHHHhcCcHH-HH--HHhhhhcCC-CCCC-----CCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHH
Q 041031 234 YMLAVFNDTKD-FM--AKLTECLDP-NLTR-----YHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRL 293 (313)
Q Consensus 234 ~~~~~~~~~~~-~~--~~l~~~~~~-~~~~-----~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l 293 (313)
..........+ +. ..+...... .... .....+..+.+|+.+||+.||.+|||+.|+++.-
T Consensus 225 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~ 293 (346)
T 1ua2_A 225 IFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 293 (346)
T ss_dssp HHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred HHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence 11100000000 00 000000000 0000 0123456789999999999999999999999754
No 185
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.9e-44 Score=334.64 Aligned_cols=257 Identities=28% Similarity=0.461 Sum_probs=210.2
Q ss_pred HHhcCccccceeccCCeEEEEEeEEC-CcceEEEeccccc--cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEee
Q 041031 9 DATSNFSTSLKIGQGSYGSVYLGKLR-GKNAAIKQMKNTK--SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYEY 84 (313)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~v~~~~~~-~~~~aiK~~~~~~--~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e~ 84 (313)
...++|++.++||+|+||.||+|.+. +..||||+++... .+.+.+|+++|+.+ ||||+++++++.+ +..++||||
T Consensus 264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~ 342 (535)
T 2h8h_A 264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 342 (535)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred cchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeeh
Confidence 34567899999999999999999998 4679999998643 46788999999999 9999999999876 678999999
Q ss_pred cCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccccCC
Q 041031 85 AQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHS 164 (313)
Q Consensus 85 ~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~~~ 164 (313)
+.+|+|.+++... ....+++..++.++.|++.||+|||+++ ++|+||||+||++++++.+||+|||++......
T Consensus 343 ~~~gsL~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 416 (535)
T 2h8h_A 343 MSKGSLLDFLKGE---TGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDN 416 (535)
T ss_dssp CTTEEHHHHHSHH---HHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCH
T ss_pred hcCCcHHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceecCCC
Confidence 9999999999421 2245889999999999999999999999 999999999999999999999999999866532
Q ss_pred hhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchhHHHHHHHHhcCcH
Q 041031 165 PEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTK 243 (313)
Q Consensus 165 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (313)
.. .......++..|+|||++.+..++.++||||||+++|+|++ |..||.+....
T Consensus 417 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~----------------------- 471 (535)
T 2h8h_A 417 EY--TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----------------------- 471 (535)
T ss_dssp HH--HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH-----------------------
T ss_pred ce--ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----------------------
Confidence 21 12222346788999999998899999999999999999999 89999754321
Q ss_pred HHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcc
Q 041031 244 DFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISS 300 (313)
Q Consensus 244 ~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 300 (313)
+....+...... .....++..+.+|+.+||+.||++|||+.+|++.|+.+..+.
T Consensus 472 ~~~~~i~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 472 EVLDQVERGYRM---PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp HHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred HHHHHHHcCCCC---CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 112222221111 123345667899999999999999999999999999887653
No 186
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=9.9e-44 Score=307.08 Aligned_cols=247 Identities=20% Similarity=0.320 Sum_probs=203.9
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc------cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEE
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK------SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFL 80 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~------~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~l 80 (313)
..++|.+.+.||+|+||.||+|.+. ++.+|+|++.... .+.+.+|+.+++.+ ||||+++++++.+.+..++
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (294)
T 2rku_A 13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 92 (294)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEE
Confidence 4578999999999999999999998 7789999986442 34577899999999 9999999999999999999
Q ss_pred EEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccccc
Q 041031 81 VYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKL 160 (313)
Q Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~ 160 (313)
+||++++++|.+++. ....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+..
T Consensus 93 v~e~~~~~~L~~~~~-----~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 164 (294)
T 2rku_A 93 VLELCRRRSLLELHK-----RRKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATK 164 (294)
T ss_dssp EEECCTTCBHHHHHH-----HHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEecCCCCCHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCcee
Confidence 999999999999884 3457899999999999999999999999 99999999999999999999999999886
Q ss_pred ccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhc
Q 041031 161 LEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240 (313)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (313)
...... ......+++.|+|||++.+..++.++||||||+++|+|++|..||......
T Consensus 165 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------------------- 221 (294)
T 2rku_A 165 VEYDGE---RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-------------------- 221 (294)
T ss_dssp CCSTTC---CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--------------------
T ss_pred cccCcc---ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------------------
Confidence 543221 223346899999999999988999999999999999999999999654321
Q ss_pred CcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 041031 241 DTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLS 294 (313)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~ 294 (313)
+....+. .... ......+..+.+++.+||+.||++|||+.++++.-.
T Consensus 222 ---~~~~~~~---~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~ 268 (294)
T 2rku_A 222 ---ETYLRIK---KNEY-SIPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 268 (294)
T ss_dssp ---HHHHHHH---TTCC-CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHH
T ss_pred ---HHHHHHh---hccC-CCccccCHHHHHHHHHHcccChhhCcCHHHHhhChh
Confidence 0011111 1111 112234457889999999999999999999998543
No 187
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.4e-44 Score=318.85 Aligned_cols=265 Identities=15% Similarity=0.197 Sum_probs=206.1
Q ss_pred hcCccccceeccCCeEEEEEeEEC----------CcceEEEeccccccHHHHHHHHHHHhc-CCCcee------------
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR----------GKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIE------------ 67 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~----------~~~~aiK~~~~~~~~~~~~e~~~l~~l-h~~i~~------------ 67 (313)
.++|.+.+.||+|+||.||+|++. ++.||+|.+... ..+.+|+++++.+ |||+++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 118 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLA 118 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCS
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--chHHHHHHHHHHhcccchhhhhhhhccCCccC
Confidence 368999999999999999999885 578999998765 4688999999999 998887
Q ss_pred ---eeeEEEe-CCeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCee
Q 041031 68 ---LIGYAAG-GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNIL 143 (313)
Q Consensus 68 ---~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil 143 (313)
+++++.. .+..++||||+ +++|.+++... ....+++..++.++.|++.||.|||+++ ++|+||||+||+
T Consensus 119 i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIl 191 (352)
T 2jii_A 119 IPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS---PKHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENIF 191 (352)
T ss_dssp CCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS---GGGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGGEE
T ss_pred ccchhhccccCCcEEEEEecCC-CcCHHHHHHhC---CcCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEE
Confidence 6677765 77899999999 99999999522 1367999999999999999999999999 999999999999
Q ss_pred eCCCC--cEEEeeccccccccCChhhh----hhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCC
Q 041031 144 LDSNF--RAKIADFGLVKLLEHSPEIA----AAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRD 217 (313)
Q Consensus 144 ~~~~~--~~~l~dfg~~~~~~~~~~~~----~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~ 217 (313)
++.++ .++|+|||++.......... .......+++.|+|||++.+..++.++||||||+++|+|++|..||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99988 89999999997655332111 1122347899999999999999999999999999999999999999765
Q ss_pred CCCCCCccccchhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHH
Q 041031 218 ANPGNNQYTEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHIL 297 (313)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~ 297 (313)
.... ..+....... ............ .....+..+.+++.+||+.||.+|||+.++++.|+++.
T Consensus 272 ~~~~-------~~~~~~~~~~-------~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 335 (352)
T 2jii_A 272 LPNT-------EDIMKQKQKF-------VDKPGPFVGPCG--HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALL 335 (352)
T ss_dssp TTCH-------HHHHHHHHHH-------HHSCCCEECTTS--CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred CcCH-------HHHHHHHHhc-------cCChhhhhhhcc--ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHH
Confidence 4210 1111110000 000000111000 11233567899999999999999999999999999998
Q ss_pred hcc
Q 041031 298 ISS 300 (313)
Q Consensus 298 ~~~ 300 (313)
...
T Consensus 336 ~~~ 338 (352)
T 2jii_A 336 QDL 338 (352)
T ss_dssp HHT
T ss_pred Hhc
Confidence 754
No 188
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.8e-44 Score=315.72 Aligned_cols=264 Identities=23% Similarity=0.347 Sum_probs=199.9
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEE
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLV 81 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv 81 (313)
..++|++.+.||+|+||.||+|.+. ++.||||.+.... ...+.+|+.+++.+ ||||+++++++.+.+..++|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 4678999999999999999999998 7889999886543 23366899999999 99999999999999999999
Q ss_pred EeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccc
Q 041031 82 YEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL 161 (313)
Q Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~ 161 (313)
|||+++++|.+++. ....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+...
T Consensus 103 ~e~~~~~~l~~~~~-----~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 174 (331)
T 4aaa_A 103 FEFVDHTILDDLEL-----FPNGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTL 174 (331)
T ss_dssp EECCSEEHHHHHHH-----STTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred EecCCcchHHHHHh-----hccCCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceee
Confidence 99999998988863 3456999999999999999999999999 999999999999999999999999998765
Q ss_pred cCChhhhhhcccccccccccCCccccCC-CCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhc
Q 041031 162 EHSPEIAAAASRIVGTFGYLAPEYVRDG-CVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240 (313)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (313)
..... ......+++.|+|||++.+. .++.++||||||+++|+|++|..||...... ..+.........
T Consensus 175 ~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~~~~~~~~ 243 (331)
T 4aaa_A 175 AAPGE---VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI--------DQLYHIMMCLGN 243 (331)
T ss_dssp ------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHHHCS
T ss_pred cCCcc---ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcH--------HHHHHHHHHhCC
Confidence 43221 22234689999999999875 6899999999999999999999999765431 111111111111
Q ss_pred CcHHHHHHhhh------hcCCCCCC------CCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 241 DTKDFMAKLTE------CLDPNLTR------YHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 241 ~~~~~~~~l~~------~~~~~~~~------~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
..+........ ...+.... .....+..+.+|+.+||+.||.+|||+.|+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 244 LIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp CCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred CChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 11111111000 00011111 112345779999999999999999999999864
No 189
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.8e-43 Score=312.58 Aligned_cols=262 Identities=19% Similarity=0.281 Sum_probs=202.8
Q ss_pred hcCccccceeccCCeEEEEEeEECCcceEEEecccccc--------------------HHHHHHHHHHHhc-CCCceeee
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKS--------------------KEFSSELKILCKV-HSNLIELI 69 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~aiK~~~~~~~--------------------~~~~~e~~~l~~l-h~~i~~~~ 69 (313)
.++|++.+.||+|+||.||+|.+.++.||||.+..... +.+.+|+.+++.+ ||||++++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 109 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE 109 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred cCceEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence 47899999999999999999999999999999864321 7789999999999 99999999
Q ss_pred eEEEeCCeEEEEEeecCCCChhhhhcCC---CCCCCCCccHHHHHHHHHHHHHHHHHHhc-CCCCceEEeccCCCCeeeC
Q 041031 70 GYAAGGDSLFLVYEYAQNGALSDHLHWP---SVKGKKPLAWTTRVQIALDAAKGLEYIHQ-YTKPYYVHRDVKTSNILLD 145 (313)
Q Consensus 70 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~l~~~~~~~~~~~i~~~l~~lh~-~~~~~i~h~di~p~nil~~ 145 (313)
+++.+.+..++||||+++++|.+++... .......+++..++.++.|++.||.|||+ .+ ++|+||+|+||+++
T Consensus 110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil~~ 186 (348)
T 2pml_X 110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNILMD 186 (348)
T ss_dssp EEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEEEC
T ss_pred EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEEEc
Confidence 9999999999999999999999983210 11125679999999999999999999999 99 99999999999999
Q ss_pred CCCcEEEeeccccccccCChhhhhhcccccccccccCCccccCC-CCCC-ccchhhHHHHHHHHHhCCCCccCCCCCCCC
Q 041031 146 SNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG-CVTT-KSDVYAFGVVLMELITGQQALSRDANPGNN 223 (313)
Q Consensus 146 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~-~~DiwslG~~l~~~~tg~~p~~~~~~~~~~ 223 (313)
.++.++|+|||.+...... ......+++.|+|||++.+. .++. ++||||||+++|+|++|..||.......
T Consensus 187 ~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-- 259 (348)
T 2pml_X 187 KNGRVKLSDFGESEYMVDK-----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLV-- 259 (348)
T ss_dssp TTSCEEECCCTTCEECBTT-----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSH--
T ss_pred CCCcEEEeccccccccccc-----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHH--
Confidence 9999999999998875432 22334689999999999877 5666 9999999999999999999997654410
Q ss_pred ccccchhHHHHHHHHhcCcHHHHH----HhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 041031 224 QYTEHRSLVDYMLAVFNDTKDFMA----KLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAI 291 (313)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~----~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 291 (313)
............+.. .................+..+.+|+.+||+.||.+|||+.++++
T Consensus 260 ---------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 260 ---------ELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp ---------HHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ---------HHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111111000000000 00000000000011345678899999999999999999999986
No 190
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.5e-43 Score=303.15 Aligned_cols=244 Identities=23% Similarity=0.384 Sum_probs=194.9
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc------cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEE
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK------SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFL 80 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~------~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~l 80 (313)
..++|.+.+.||+|+||.||+|.+. ++.||||.+.... ...+.+|+.+++.+ ||||+++++++.+.+..++
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (276)
T 2h6d_A 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM 88 (276)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEE
Confidence 4578999999999999999999987 8899999986432 34678899999999 9999999999999999999
Q ss_pred EEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccccc
Q 041031 81 VYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKL 160 (313)
Q Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~ 160 (313)
|||++++++|.+++. ....+++..++.++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||.+..
T Consensus 89 v~e~~~~~~L~~~l~-----~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~ 160 (276)
T 2h6d_A 89 VMEYVSGGELFDYIC-----KHGRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNM 160 (276)
T ss_dssp EEECCCSCBHHHHHH-----HHCSCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGC
T ss_pred EEeccCCCcHHHHHh-----ccCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccccc
Confidence 999999999999984 3356899999999999999999999999 99999999999999999999999999886
Q ss_pred ccCChhhhhhcccccccccccCCccccCCCC-CCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHh
Q 041031 161 LEHSPEIAAAASRIVGTFGYLAPEYVRDGCV-TTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF 239 (313)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (313)
..... ......+++.|+|||++.+..+ +.++||||||+++|+|++|..||......
T Consensus 161 ~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------------------- 217 (276)
T 2h6d_A 161 MSDGE----FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP------------------- 217 (276)
T ss_dssp CCC-----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH-------------------
T ss_pred cCCCc----ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH-------------------
Confidence 65432 1223467899999999987765 68999999999999999999999643221
Q ss_pred cCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 240 NDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
+....+..... ......+..+.+++.+||+.||.+|||+.++++.
T Consensus 218 ----~~~~~~~~~~~----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 218 ----TLFKKIRGGVF----YIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp ----HHHHHHHHCCC----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ----HHHHHhhcCcc----cCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 11111211111 1122334578899999999999999999999985
No 191
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.4e-44 Score=309.90 Aligned_cols=257 Identities=22% Similarity=0.340 Sum_probs=202.8
Q ss_pred HHhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEE--eCCeE
Q 041031 9 DATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAA--GGDSL 78 (313)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~--~~~~~ 78 (313)
...++|++.+.||+|+||.||+|.+. ++.+|+|.+.... .+.+.+|+.+++.+ ||||+++++++. .....
T Consensus 3 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 82 (279)
T 2w5a_A 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTL 82 (279)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEE
T ss_pred CchhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceE
Confidence 34689999999999999999999987 7889999986542 34577899999999 999999999875 46789
Q ss_pred EEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCC--CCceEEeccCCCCeeeCCCCcEEEeecc
Q 041031 79 FLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT--KPYYVHRDVKTSNILLDSNFRAKIADFG 156 (313)
Q Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~--~~~i~h~di~p~nil~~~~~~~~l~dfg 156 (313)
++||||+++++|.+++.... .....+++..++.++.|++.||.|||+.+ ..+++|+||+|+||+++.++.++|+|||
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 83 YIVMEYCEGGDLASVITKGT-KERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEEEECCTTEEHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEEEeCCCCCCHHHHHHhhc-ccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 99999999999999985322 12345899999999999999999999986 2338999999999999999999999999
Q ss_pred ccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHH
Q 041031 157 LVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYML 236 (313)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 236 (313)
.+........ ......+++.|+|||++.+..++.++||||||+++|+|++|..||......
T Consensus 162 ~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---------------- 222 (279)
T 2w5a_A 162 LARILNHDTS---FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK---------------- 222 (279)
T ss_dssp HHHHC---CH---HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH----------------
T ss_pred hheeeccccc---cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH----------------
Confidence 9876553322 112245789999999999989999999999999999999999999754321
Q ss_pred HHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHH
Q 041031 237 AVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSH 295 (313)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~ 295 (313)
+....+.....+ ......+..+.+++.+||+.||.+|||+.+|++.++.
T Consensus 223 -------~~~~~i~~~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 223 -------ELAGKIREGKFR---RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp -------HHHHHHHHTCCC---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred -------HHHHHHhhcccc---cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 112222221111 1223455678999999999999999999999987653
No 192
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.6e-43 Score=327.82 Aligned_cols=251 Identities=22% Similarity=0.299 Sum_probs=203.9
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc------cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK------SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLV 81 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~------~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv 81 (313)
.++|.+.+.||+|+||.||+|+++ ++.||+|++.... ...+.+|..+++.+ ||||+++++++.+.+.+++|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 478999999999999999999986 8899999986432 34577899999999 99999999999999999999
Q ss_pred EeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccc
Q 041031 82 YEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL 161 (313)
Q Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~ 161 (313)
|||++||+|.+++.... .....+++..++.++.|++.||.|||+++ |+|+||||+||+++.+|.+||+|||++...
T Consensus 264 mE~~~gg~L~~~l~~~~-~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~ 339 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVD-EDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVEL 339 (543)
T ss_dssp ECCCTTCBHHHHHHTSS-TTSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEeccCCCHHHHHHHhh-cccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeec
Confidence 99999999999985332 22457999999999999999999999999 999999999999999999999999999875
Q ss_pred cCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcC
Q 041031 162 EHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFND 241 (313)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (313)
..... ......||+.|+|||++.+..++.++|+|||||++|+|++|..||....... ...
T Consensus 340 ~~~~~---~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~--------~~~--------- 399 (543)
T 3c4z_A 340 KAGQT---KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV--------ENK--------- 399 (543)
T ss_dssp CTTCC---CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC--------CHH---------
T ss_pred cCCCc---ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch--------hHH---------
Confidence 53321 2233478999999999999999999999999999999999999997654321 000
Q ss_pred cHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCH-----HHHHH
Q 041031 242 TKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDM-----SNAAI 291 (313)
Q Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~-----~~ll~ 291 (313)
+....+.... . ......+..+.+|+++||+.||.+||++ .+|++
T Consensus 400 --~~~~~i~~~~-~---~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 400 --ELKQRVLEQA-V---TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp --HHHHHHHHCC-C---CCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred --HHHHHHhhcc-c---CCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 1111111110 1 1223445678899999999999999975 55653
No 193
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=4.6e-44 Score=317.92 Aligned_cols=268 Identities=21% Similarity=0.320 Sum_probs=202.9
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEe
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYE 83 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e 83 (313)
.++|++.+.||+|+||.||+|.+. +..+|+|++.... ...+.+|+.+++.+ ||||+++++++.+.+..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 468999999999999999999998 8889999987543 34577899999999 9999999999999999999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcC-CCCceEEeccCCCCeeeCCCCcEEEeecccccccc
Q 041031 84 YAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQY-TKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLE 162 (313)
Q Consensus 84 ~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~-~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~ 162 (313)
|+++++|.+++. ....+++..+..++.|++.||.|||+. + ++|+||||+||+++.++.++|+|||++....
T Consensus 112 ~~~~~~L~~~l~-----~~~~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 183 (360)
T 3eqc_A 112 HMDGGSLDQVLK-----KAGRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 183 (360)
T ss_dssp CCTTCBHHHHHH-----HHSSCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred CCCCCCHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCcccc
Confidence 999999999984 345689999999999999999999996 8 9999999999999999999999999986543
Q ss_pred CChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCcccc---------------
Q 041031 163 HSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTE--------------- 227 (313)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~--------------- 227 (313)
. .......+++.|+|||++.+..++.++||||||+++|+|++|..||.............
T Consensus 184 ~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (360)
T 3eqc_A 184 D-----SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPR 258 (360)
T ss_dssp H-----HC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------
T ss_pred c-----ccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcc
Confidence 2 12233468999999999999999999999999999999999999997543210000000
Q ss_pred --chhHHHHH--HHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHH
Q 041031 228 --HRSLVDYM--LAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRL 293 (313)
Q Consensus 228 --~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l 293 (313)
......+. ........+....+.....+.. .....+..+.+|+.+||+.||.+|||+.++++.-
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 326 (360)
T 3eqc_A 259 TPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKL--PSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 326 (360)
T ss_dssp ---------------CCCHHHHHHHHHHSCCCCC--CTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSH
T ss_pred cCCCcccccccCCCCcccchhhhhHHhccCCCCC--CcccccHHHHHHHHHHhhcChhhCCCHHHHhhCh
Confidence 00000000 0000000111111111111111 2223456789999999999999999999999643
No 194
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=9.4e-44 Score=306.40 Aligned_cols=251 Identities=21% Similarity=0.323 Sum_probs=185.5
Q ss_pred HHhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccccH----H-HHHHHHHHHhc-CCCceeeeeEEEeCCeEEE
Q 041031 9 DATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTKSK----E-FSSELKILCKV-HSNLIELIGYAAGGDSLFL 80 (313)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~~~----~-~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~l 80 (313)
...++|++.+.||+|+||.||+|.+. ++.||+|.+...... . ..++...++.+ ||||+++++++.+.+..++
T Consensus 4 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~l 83 (290)
T 3fme_A 4 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 83 (290)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEE
T ss_pred ccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEE
Confidence 35689999999999999999999985 889999999765322 1 23334445556 9999999999999999999
Q ss_pred EEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcC-CCCceEEeccCCCCeeeCCCCcEEEeeccccc
Q 041031 81 VYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQY-TKPYYVHRDVKTSNILLDSNFRAKIADFGLVK 159 (313)
Q Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~-~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~ 159 (313)
||||++ ++|.+++.... .....+++..++.++.|++.||+|||++ + ++|+||||+||+++.++.++|+|||++.
T Consensus 84 v~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T 3fme_A 84 CMELMD-TSLDKFYKQVI-DKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISG 158 (290)
T ss_dssp EEECCS-EEHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC----
T ss_pred EEehhc-cchHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCcc
Confidence 999996 58877764211 2346799999999999999999999998 9 9999999999999999999999999987
Q ss_pred cccCChhhhhhcccccccccccCCccc----cCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHH
Q 041031 160 LLEHSPEIAAAASRIVGTFGYLAPEYV----RDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYM 235 (313)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~aPE~~----~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 235 (313)
...... ......+++.|+|||++ .+..++.++||||||+++|+|++|..||...... .
T Consensus 159 ~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----------~---- 220 (290)
T 3fme_A 159 YLVDDV----AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP----------F---- 220 (290)
T ss_dssp ---------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH----------H----
T ss_pred cccccc----cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch----------H----
Confidence 655432 22223689999999996 4567899999999999999999999999754321 0
Q ss_pred HHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 236 LAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
........ ...........+..+.+++.+||+.||.+|||+.++++.
T Consensus 221 --------~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 221 --------QQLKQVVE--EPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp --------HHHHHHHH--SCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred --------HHHHHHhc--cCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 00111111 111111223455678999999999999999999999873
No 195
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-43 Score=311.04 Aligned_cols=256 Identities=27% Similarity=0.433 Sum_probs=199.2
Q ss_pred ChHHHHHHhcCccccceeccCCeEEEEEeEEC--CcceEEEecccc--ccHHHHHHHHHHHhc--CCCceeeeeEEEe--
Q 041031 3 SYNEVRDATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT--KSKEFSSELKILCKV--HSNLIELIGYAAG-- 74 (313)
Q Consensus 3 ~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~--~~~~~~~e~~~l~~l--h~~i~~~~~~~~~-- 74 (313)
+...+....++|++.+.||+|+||.||+|.+. ++.||||++... ....+.+|+.+++.+ ||||+++++++..
T Consensus 15 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 94 (326)
T 2x7f_A 15 DLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKN 94 (326)
T ss_dssp -CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC
T ss_pred cchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeecc
Confidence 44556667889999999999999999999995 889999998644 456788999999998 9999999999976
Q ss_pred ----CCeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcE
Q 041031 75 ----GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRA 150 (313)
Q Consensus 75 ----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~ 150 (313)
.+..++||||+++++|.+++... ....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.+
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~ 168 (326)
T 2x7f_A 95 PPGMDDQLWLVMEFCGAGSVTDLIKNT---KGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEV 168 (326)
T ss_dssp --CCCCEEEEEEECCTTEEHHHHHHHS---GGGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCE
T ss_pred CccccceEEEEEEcCCCCcHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCCE
Confidence 56899999999999999998532 2356889999999999999999999999 9999999999999999999
Q ss_pred EEeeccccccccCChhhhhhcccccccccccCCcccc-----CCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCcc
Q 041031 151 KIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVR-----DGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQY 225 (313)
Q Consensus 151 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~-----~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~ 225 (313)
+|+|||++........ ......+++.|+|||++. +..++.++||||||+++|+|++|..||......
T Consensus 169 kl~Dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----- 240 (326)
T 2x7f_A 169 KLVDFGVSAQLDRTVG---RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM----- 240 (326)
T ss_dssp EECCCTTTC----------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-----
T ss_pred EEeeCcCceecCcCcc---ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH-----
Confidence 9999999876543211 222346899999999997 566889999999999999999999999643321
Q ss_pred ccchhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 226 TEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
+....+.....+.. .....+..+.+|+.+||..||.+|||+.++++.
T Consensus 241 ------------------~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 241 ------------------RALFLIPRNPAPRL--KSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp ------------------HHHHHHHHSCCCCC--SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ------------------HHHHHhhcCccccC--CccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00111111111111 123345678899999999999999999999863
No 196
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-43 Score=313.42 Aligned_cols=259 Identities=23% Similarity=0.336 Sum_probs=195.8
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEeC------
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAGG------ 75 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~------ 75 (313)
+.++|++.+.||+|+||.||+|.+. ++.||||.+.... ...+.+|+.+++.+ ||||+++++++...
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 4578999999999999999999986 8899999985432 34577899999999 99999999999765
Q ss_pred CeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeec
Q 041031 76 DSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADF 155 (313)
Q Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df 155 (313)
..+++|||++ +++|.+++.. ..+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.+||+||
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Df 172 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKH------EKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDF 172 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCC
T ss_pred ceEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEee
Confidence 3469999999 8899999842 46889999999999999999999999 999999999999999999999999
Q ss_pred cccccccCChhhhhhcccccccccccCCccccC-CCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHH
Q 041031 156 GLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRD-GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDY 234 (313)
Q Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~ 234 (313)
|++...... .....+|+.|+|||++.+ ..++.++||||+||++|+|++|+.||.+.+.. ..+...
T Consensus 173 g~a~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--------~~l~~i 238 (367)
T 1cm8_A 173 GLARQADSE------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL--------DQLKEI 238 (367)
T ss_dssp TTCEECCSS------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHH
T ss_pred ecccccccc------cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHH
Confidence 999865432 223467999999999987 67999999999999999999999999765431 111111
Q ss_pred HHHHhcCcHHHH------------HHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 235 MLAVFNDTKDFM------------AKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 235 ~~~~~~~~~~~~------------~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
.........++. ..+.......+.......+..+.+|+.+||..||.+|||+.++++.
T Consensus 239 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 239 MKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 111111111111 1111111111222233456778999999999999999999999874
No 197
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1e-43 Score=312.78 Aligned_cols=246 Identities=20% Similarity=0.330 Sum_probs=203.3
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEecccc------ccHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEE
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT------KSKEFSSELKILCKV-HSNLIELIGYAAGGDSLFL 80 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~------~~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~l 80 (313)
..++|.+.+.||+|+||.||++.+. ++.+|+|++... ..+.+.+|+.+++.+ ||||+++++++.+.+..++
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 3568999999999999999999987 678999998654 244577899999999 9999999999999999999
Q ss_pred EEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccccc
Q 041031 81 VYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKL 160 (313)
Q Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~ 160 (313)
||||+.+++|.+++. ....+++..++.++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||++..
T Consensus 119 v~e~~~~~~L~~~~~-----~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 190 (335)
T 2owb_A 119 VLELCRRRSLLELHK-----RRKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATK 190 (335)
T ss_dssp EECCCTTCBHHHHHH-----HHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEecCCCCCHHHHHh-----ccCCCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCcee
Confidence 999999999999984 3456899999999999999999999999 99999999999999999999999999886
Q ss_pred ccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhc
Q 041031 161 LEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240 (313)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (313)
...... ......+++.|+|||++.+..++.++||||||+++|+|++|..||......
T Consensus 191 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------------------- 247 (335)
T 2owb_A 191 VEYDGE---RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-------------------- 247 (335)
T ss_dssp CCSTTC---CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--------------------
T ss_pred cccCcc---cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH--------------------
Confidence 653221 223346899999999999988999999999999999999999999653321
Q ss_pred CcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHH
Q 041031 241 DTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRL 293 (313)
Q Consensus 241 ~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l 293 (313)
+....+... ... .....+..+.+|+.+||+.||.+|||+.++++.-
T Consensus 248 ---~~~~~~~~~-~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~ 293 (335)
T 2owb_A 248 ---ETYLRIKKN-EYS---IPKHINPVAASLIQKMLQTDPTARPTINELLNDE 293 (335)
T ss_dssp ---HHHHHHHHT-CCC---CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred ---HHHHHHhcC-CCC---CCccCCHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence 111111111 111 1223345688899999999999999999999753
No 198
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=8.9e-44 Score=323.39 Aligned_cols=197 Identities=28% Similarity=0.412 Sum_probs=164.6
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEeC-----C
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAGG-----D 76 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~-----~ 76 (313)
+.++|.+.+.||+|+||.||+|.+. ++.||||++.... ...+.+|+.+++.+ ||||+++++++... +
T Consensus 24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 4678999999999999999999987 7889999987532 34578999999999 99999999999766 5
Q ss_pred eEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecc
Q 041031 77 SLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFG 156 (313)
Q Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg 156 (313)
.+++|||+++ ++|.+++. ....+++..++.++.|++.||+|||+.+ |+|+||||+||+++.++.+||+|||
T Consensus 104 ~~~lv~e~~~-~~L~~~~~-----~~~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFG 174 (432)
T 3n9x_A 104 ELYIVLEIAD-SDLKKLFK-----TPIFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFG 174 (432)
T ss_dssp CEEEEEECCS-EEHHHHHH-----SSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCT
T ss_pred eEEEEEecCC-cCHHHHHh-----ccCCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCC
Confidence 7999999985 69999984 4466999999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCChhhh-------------------hhcccccccccccCCccc-cCCCCCCccchhhHHHHHHHHHhCCCCcc
Q 041031 157 LVKLLEHSPEIA-------------------AAASRIVGTFGYLAPEYV-RDGCVTTKSDVYAFGVVLMELITGQQALS 215 (313)
Q Consensus 157 ~~~~~~~~~~~~-------------------~~~~~~~~~~~~~aPE~~-~~~~~~~~~DiwslG~~l~~~~tg~~p~~ 215 (313)
++.......... .......+|+.|+|||++ .+..++.++|||||||++|+|++|..||.
T Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 175 LARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp TCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred CcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 998765432110 112345789999999986 56679999999999999999998655554
No 199
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=9.1e-44 Score=325.84 Aligned_cols=273 Identities=20% Similarity=0.280 Sum_probs=185.7
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEe-----CCe
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAG-----GDS 77 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~-----~~~ 77 (313)
.++|++.+.||+|+||.||+|.+. ++.||||.+.... ...+.+|+.+++.+ ||||+++++++.. ...
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 478999999999999999999887 7899999886532 34577899999999 9999999999843 357
Q ss_pred EEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccc
Q 041031 78 LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGL 157 (313)
Q Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~ 157 (313)
+++|||++ +++|.+++. ....+++..++.++.|++.||+|||+.+ |+|+||||+|||++.++.+||+|||+
T Consensus 132 ~~lv~e~~-~~~L~~~~~-----~~~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGl 202 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFR-----TPVYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGL 202 (458)
T ss_dssp EEEEECCC-SEEHHHHHH-----SSCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEecc-ccchhhhcc-----cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeeccccc
Confidence 99999998 578999984 4467999999999999999999999999 99999999999999999999999999
Q ss_pred cccccCChhh------------------------hhhcccccccccccCCccc-cCCCCCCccchhhHHHHHHHHHh---
Q 041031 158 VKLLEHSPEI------------------------AAAASRIVGTFGYLAPEYV-RDGCVTTKSDVYAFGVVLMELIT--- 209 (313)
Q Consensus 158 ~~~~~~~~~~------------------------~~~~~~~~~~~~~~aPE~~-~~~~~~~~~DiwslG~~l~~~~t--- 209 (313)
+......... ........+|+.|+|||++ .+..++.++|||||||++|+|++
T Consensus 203 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~ 282 (458)
T 3rp9_A 203 ARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIK 282 (458)
T ss_dssp CBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTST
T ss_pred chhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcc
Confidence 9865432110 0122334679999999986 46679999999999999999999
Q ss_pred --------CCCCccCCCCCCCCcccc-----------chhHHHHHHHHhcC-cHHH---------HHHhhhhc---CCCC
Q 041031 210 --------GQQALSRDANPGNNQYTE-----------HRSLVDYMLAVFND-TKDF---------MAKLTECL---DPNL 257 (313)
Q Consensus 210 --------g~~p~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~-~~~~---------~~~l~~~~---~~~~ 257 (313)
|.+||.+........... .......+...... ..+. ...+.... ...+
T Consensus 283 ~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (458)
T 3rp9_A 283 ENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDL 362 (458)
T ss_dssp TTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCG
T ss_pred ccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCH
Confidence 566665443211000000 00000111111100 0000 00000000 0011
Q ss_pred CCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 258 TRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 258 ~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
.......+..+.+|+++||..||.+|||+.|+++.
T Consensus 363 ~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~H 397 (458)
T 3rp9_A 363 AERFPASSADAIHLLKRMLVFNPNKRITINECLAH 397 (458)
T ss_dssp GGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 11223346678899999999999999999999975
No 200
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.3e-43 Score=315.47 Aligned_cols=265 Identities=22% Similarity=0.304 Sum_probs=201.5
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEeC-----Ce
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAGG-----DS 77 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~-----~~ 77 (313)
+.++|++.+.||+|+||.||+|.+. +..||||.+.... ...+.+|+.+++.+ ||||+++++++... ..
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 4568999999999999999999987 7789999987543 24577899999999 99999999999654 46
Q ss_pred EEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccc
Q 041031 78 LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGL 157 (313)
Q Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~ 157 (313)
.++|||++. ++|.+++. ...+++..++.++.|++.||+|||+++ ++|+||||+||+++.++.++|+|||+
T Consensus 105 ~~iv~e~~~-~~L~~~l~------~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~ 174 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLK------TQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGL 174 (364)
T ss_dssp EEEEEECCS-EEHHHHHH------HCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEcccC-cCHHHHHH------hCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcc
Confidence 899999996 58999884 245899999999999999999999999 99999999999999999999999999
Q ss_pred cccccCChhhhhhcccccccccccCCccccC-CCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHH
Q 041031 158 VKLLEHSPEIAAAASRIVGTFGYLAPEYVRD-GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYML 236 (313)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 236 (313)
+.................+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+..... .+.....
T Consensus 175 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--------~~~~i~~ 246 (364)
T 3qyz_A 175 ARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD--------QLNHILG 246 (364)
T ss_dssp CEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG--------HHHHHHH
T ss_pred eEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH--------HHHHHHH
Confidence 9876543332222334578999999998754 558999999999999999999999997654321 1111111
Q ss_pred HHhcCcHHHH---------HHhhhhcCCCCCC---CCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 237 AVFNDTKDFM---------AKLTECLDPNLTR---YHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 237 ~~~~~~~~~~---------~~l~~~~~~~~~~---~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
.......+.. ............. .....+..+.+|+.+||+.||.+|||+.|+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 247 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 1111111100 0011111111000 112345678899999999999999999999864
No 201
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=5.6e-43 Score=301.79 Aligned_cols=244 Identities=25% Similarity=0.412 Sum_probs=194.5
Q ss_pred CccccceeccCCeEEEEEeEEC--CcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEe----CCeEEE
Q 041031 13 NFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAG----GDSLFL 80 (313)
Q Consensus 13 ~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~----~~~~~l 80 (313)
.|.+.+.||+|+||.||+|.+. +..||+|.+.... ...+.+|+.+++.+ ||||+++++++.. ...+++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 4888899999999999999987 6778999886432 34577899999999 9999999999865 456899
Q ss_pred EEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeC-CCCcEEEeeccccc
Q 041031 81 VYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLD-SNFRAKIADFGLVK 159 (313)
Q Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~-~~~~~~l~dfg~~~ 159 (313)
||||+++++|.+++. ....+++..++.++.|++.||.|||+.+. +++|+||+|+||+++ +++.++|+|||++.
T Consensus 107 v~e~~~~~~L~~~l~-----~~~~~~~~~~~~~~~qi~~~l~~lH~~~~-~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~ 180 (290)
T 1t4h_A 107 VTELMTSGTLKTYLK-----RFKVMKIKVLRSWCRQILKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEECCCSCBHHHHHH-----HHSSCCHHHHHHHHHHHHHHHHHHHTSSS-CCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEEecCCCCHHHHHH-----HccCCCHHHHHHHHHHHHHHHHHHHcCCC-CEEECCCCHHHEEEECCCCCEEEeeCCCcc
Confidence 999999999999994 34668999999999999999999999862 289999999999998 78999999999987
Q ss_pred cccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHh
Q 041031 160 LLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF 239 (313)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (313)
..... ......+++.|+|||++.+ .++.++||||||+++|+|++|..||.......
T Consensus 181 ~~~~~-----~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~------------------ 236 (290)
T 1t4h_A 181 LKRAS-----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAA------------------ 236 (290)
T ss_dssp GCCTT-----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH------------------
T ss_pred ccccc-----ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHH------------------
Confidence 54432 2223468999999998874 58999999999999999999999996543310
Q ss_pred cCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 240 NDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
.....+.....+ .......+..+.+++.+||+.||.+|||+.++++.
T Consensus 237 ----~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 237 ----QIYRRVTSGVKP--ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp ----HHHHHHTTTCCC--GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ----HHHHHHhccCCc--cccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 111111111111 11222334578899999999999999999999863
No 202
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=8.5e-43 Score=310.99 Aligned_cols=262 Identities=23% Similarity=0.274 Sum_probs=192.3
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEeCC-----
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAGGD----- 76 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~----- 76 (313)
..++|++.+.||+|+||.||+|.+. ++.||||++.... ...+.+|+.+++.+ ||||+++++++...+
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 3578999999999999999999887 7889999986532 34577899999999 999999999997665
Q ss_pred -eEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeec
Q 041031 77 -SLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADF 155 (313)
Q Consensus 77 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df 155 (313)
..++||||++ ++|.+.+. ..+++..+..++.|++.||+|||+++ ++|+||||+||+++.++.+||+||
T Consensus 103 ~~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Df 171 (371)
T 2xrw_A 103 QDVYIVMELMD-ANLCQVIQ-------MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDF 171 (371)
T ss_dssp CEEEEEEECCS-EEHHHHHH-------SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCC
T ss_pred cceEEEEEcCC-CCHHHHHh-------hccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEe
Confidence 7899999996 57888873 34889999999999999999999999 999999999999999999999999
Q ss_pred cccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHH
Q 041031 156 GLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYM 235 (313)
Q Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 235 (313)
|++....... ......+|+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.. ..+....
T Consensus 172 g~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------~~~~~i~ 239 (371)
T 2xrw_A 172 GLARTAGTSF----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI--------DQWNKVI 239 (371)
T ss_dssp CC--------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHH
T ss_pred eccccccccc----ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHH
Confidence 9987654321 122346899999999999999999999999999999999999999765431 0111111
Q ss_pred HHHhcCcHHHHHHh-----------------------hhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 236 LAVFNDTKDFMAKL-----------------------TECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 236 ~~~~~~~~~~~~~l-----------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
.......+++...+ .....+.........+..+.+|+.+||..||.+|||+.|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 240 EQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp C-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 00000001111000 0000000000112336778999999999999999999999975
Q ss_pred HH
Q 041031 293 LS 294 (313)
Q Consensus 293 l~ 294 (313)
=.
T Consensus 320 p~ 321 (371)
T 2xrw_A 320 PY 321 (371)
T ss_dssp HH
T ss_pred cc
Confidence 43
No 203
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=4.3e-43 Score=311.83 Aligned_cols=269 Identities=24% Similarity=0.257 Sum_probs=199.4
Q ss_pred hHHHHHHhcCccccceeccCCeEEEEEeEEC-CcceEEEeccccc--------------cHHHHHHHHHHHhc-CCCcee
Q 041031 4 YNEVRDATSNFSTSLKIGQGSYGSVYLGKLR-GKNAAIKQMKNTK--------------SKEFSSELKILCKV-HSNLIE 67 (313)
Q Consensus 4 ~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~-~~~~aiK~~~~~~--------------~~~~~~e~~~l~~l-h~~i~~ 67 (313)
.+.+....++|.+.+.||+|+||.||+|.+. ++.||||.+.... .+.+.+|+.+++.+ ||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 5678889999999999999999999999887 8889999886432 15688999999999 999999
Q ss_pred eeeEEEe-----CCeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCe
Q 041031 68 LIGYAAG-----GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNI 142 (313)
Q Consensus 68 ~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~ni 142 (313)
+++++.. ....++|||++. ++|.+.+. .....+++..++.++.|++.||.|||+++ ++|+||||+||
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NI 165 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIH----DQRIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNI 165 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHH----CTTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGE
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHH----hcccCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHE
Confidence 9999843 346899999996 68888875 34457999999999999999999999999 99999999999
Q ss_pred eeCCCCcEEEeeccccccccCChhhhhhcccccccccccCCccccC-CCCCCccchhhHHHHHHHHHhCCCCccCCCCCC
Q 041031 143 LLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRD-GCVTTKSDVYAFGVVLMELITGQQALSRDANPG 221 (313)
Q Consensus 143 l~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~ 221 (313)
+++.++.++|+|||++....... ......+++.|+|||++.+ ..++.++|||||||++|+|++|..||.+....
T Consensus 166 l~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~- 240 (362)
T 3pg1_A 166 LLADNNDITICDFNLAREDTADA----NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY- 240 (362)
T ss_dssp EECTTCCEEECCTTC-------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-
T ss_pred EEcCCCCEEEEecCccccccccc----ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH-
Confidence 99999999999999987544322 2223467899999999987 67899999999999999999999999764421
Q ss_pred CCccccchhHHHHHHHHhc---------CcHHHHHHhhhhcCCCCCC----CCHHHHHHHHHHHhhccccCcCCCCCHHH
Q 041031 222 NNQYTEHRSLVDYMLAVFN---------DTKDFMAKLTECLDPNLTR----YHKDSMLQMALLSKDCVDENWKRRPDMSN 288 (313)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~~l~~~~~~~~~~----~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 288 (313)
..+......... ........+.......... .....+..+.+|+.+||+.||.+|||+.+
T Consensus 241 -------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 313 (362)
T 3pg1_A 241 -------NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQ 313 (362)
T ss_dssp -------HHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred -------HHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHH
Confidence 111111111100 0111111111111111111 12233567889999999999999999999
Q ss_pred HHHH
Q 041031 289 AAIR 292 (313)
Q Consensus 289 ll~~ 292 (313)
+++.
T Consensus 314 ll~h 317 (362)
T 3pg1_A 314 ALRH 317 (362)
T ss_dssp HHTS
T ss_pred HHcC
Confidence 9864
No 204
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.8e-43 Score=319.03 Aligned_cols=281 Identities=23% Similarity=0.330 Sum_probs=185.7
Q ss_pred HhcCccc-cceeccCCeEEEEEeEEC----CcceEEEeccccc-cHHHHHHHHHHHhc-CCCceeeeeEEEe--CCeEEE
Q 041031 10 ATSNFST-SLKIGQGSYGSVYLGKLR----GKNAAIKQMKNTK-SKEFSSELKILCKV-HSNLIELIGYAAG--GDSLFL 80 (313)
Q Consensus 10 ~~~~y~~-~~~lg~g~~g~v~~~~~~----~~~~aiK~~~~~~-~~~~~~e~~~l~~l-h~~i~~~~~~~~~--~~~~~l 80 (313)
..+.|.+ .++||+|+||.||+|+++ ++.||||.+.... ...+.+|+.+++.+ ||||+++++++.. ....++
T Consensus 18 ~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l 97 (405)
T 3rgf_A 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWL 97 (405)
T ss_dssp HHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred hhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence 4456777 558999999999999965 6789999998654 55688999999999 9999999999954 678999
Q ss_pred EEeecCCCChhhhhcCCC----CCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeee----CCCCcEEE
Q 041031 81 VYEYAQNGALSDHLHWPS----VKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILL----DSNFRAKI 152 (313)
Q Consensus 81 v~e~~~~~~L~~~l~~~~----~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~----~~~~~~~l 152 (313)
||||+. ++|.+++.... ......+++..++.++.|++.||+|||+++ |+|+||||+||++ +.++.+||
T Consensus 98 v~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl 173 (405)
T 3rgf_A 98 LFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKI 173 (405)
T ss_dssp EEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred EEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcEEE
Confidence 999995 58887773211 112235899999999999999999999999 9999999999999 67789999
Q ss_pred eeccccccccCChhhhhhcccccccccccCCccccC-CCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhH
Q 041031 153 ADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRD-GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSL 231 (313)
Q Consensus 153 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~ 231 (313)
+|||++.................+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+...............
T Consensus 174 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 253 (405)
T 3rgf_A 174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQ 253 (405)
T ss_dssp CCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHH
T ss_pred EECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHH
Confidence 999999876543222223334578999999999987 4589999999999999999999999976654321111111111
Q ss_pred HHHHHHHhcCc-----------HHHHHHhhhhcCCCCCCC---------CHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 041031 232 VDYMLAVFNDT-----------KDFMAKLTECLDPNLTRY---------HKDSMLQMALLSKDCVDENWKRRPDMSNAAI 291 (313)
Q Consensus 232 ~~~~~~~~~~~-----------~~~~~~l~~~~~~~~~~~---------~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 291 (313)
...+....... .+................ ....+..+.+|+.+||..||.+|||+.|+++
T Consensus 254 l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~ 333 (405)
T 3rgf_A 254 LDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 333 (405)
T ss_dssp HHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 11111110000 000000000000000000 0011346788999999999999999999997
Q ss_pred HHH
Q 041031 292 RLS 294 (313)
Q Consensus 292 ~l~ 294 (313)
.=+
T Consensus 334 hp~ 336 (405)
T 3rgf_A 334 DPY 336 (405)
T ss_dssp SGG
T ss_pred Chh
Confidence 533
No 205
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=3.1e-43 Score=319.42 Aligned_cols=196 Identities=22% Similarity=0.327 Sum_probs=169.9
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc--cHHHHHHHHHHHhc-------CCCceeeeeEEEeCCeE
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK--SKEFSSELKILCKV-------HSNLIELIGYAAGGDSL 78 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~--~~~~~~e~~~l~~l-------h~~i~~~~~~~~~~~~~ 78 (313)
+..+|++.++||+|+||.||+|.+. ++.||||++.... ...+.+|+.+++.+ |+||+++++++...+..
T Consensus 95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 3457999999999999999999987 7889999997654 34567788888887 56999999999999999
Q ss_pred EEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCc--EEEeecc
Q 041031 79 FLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFR--AKIADFG 156 (313)
Q Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~--~~l~dfg 156 (313)
++|||++. ++|.+++... ....+++..++.++.|++.||+|||+.+ |+|+||||+||+++.++. +||+|||
T Consensus 175 ~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG 247 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKN---KFQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFG 247 (429)
T ss_dssp EEEECCCC-CBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCT
T ss_pred EEEEeccC-CCHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeecc
Confidence 99999995 6899988522 2345899999999999999999999999 999999999999999887 9999999
Q ss_pred ccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCC
Q 041031 157 LVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDA 218 (313)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~ 218 (313)
++...... .....+|+.|+|||++.+..++.++|||||||++|+|++|..||.+..
T Consensus 248 ~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 248 SSCYEHQR------VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp TCEETTCC------CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cceecCCc------ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 98754432 223468999999999999999999999999999999999999997654
No 206
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=3.3e-43 Score=304.83 Aligned_cols=248 Identities=21% Similarity=0.344 Sum_probs=197.2
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc---cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEe
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK---SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYE 83 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~---~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e 83 (313)
..++|++.+.||+|+||.||+|.+. ++.+|+|.+.... .+.+.+|+.+++.+ ||||+++++++.+.+..++|||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 4678999999999999999999997 7889999987543 45678899999999 9999999999999999999999
Q ss_pred ecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccccC
Q 041031 84 YAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEH 163 (313)
Q Consensus 84 ~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~~ 163 (313)
|+++++|.+++. .....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 97 ~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (302)
T 2j7t_A 97 FCPGGAVDAIML----ELDRGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK 169 (302)
T ss_dssp CCTTEEHHHHHH----HHTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHHHH
T ss_pred eCCCCcHHHHHH----hhccCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCccccc
Confidence 999999999884 23456899999999999999999999999 99999999999999999999999998754221
Q ss_pred ChhhhhhcccccccccccCCcccc-----CCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHH
Q 041031 164 SPEIAAAASRIVGTFGYLAPEYVR-----DGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAV 238 (313)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~aPE~~~-----~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (313)
. ........+++.|+|||++. +..++.++||||||+++|+|++|..||......
T Consensus 170 ~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------------------ 228 (302)
T 2j7t_A 170 T---LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM------------------ 228 (302)
T ss_dssp H---HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH------------------
T ss_pred c---ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH------------------
Confidence 1 11222346899999999983 667899999999999999999999999754321
Q ss_pred hcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 041031 239 FNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAI 291 (313)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 291 (313)
+....+.....+. .......+..+.+++.+||+.||.+|||+.++++
T Consensus 229 -----~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 229 -----RVLLKIAKSDPPT-LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp -----HHHHHHHHSCCCC-CSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred -----HHHHHHhccCCcc-cCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 1111111111111 1123345567899999999999999999999985
No 207
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.7e-43 Score=304.19 Aligned_cols=243 Identities=23% Similarity=0.322 Sum_probs=196.5
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEecccc-----ccHHHHHHHHHHHhc--CCCceeeeeEEEeCCeEEE
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT-----KSKEFSSELKILCKV--HSNLIELIGYAAGGDSLFL 80 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~-----~~~~~~~e~~~l~~l--h~~i~~~~~~~~~~~~~~l 80 (313)
..++|++.+.||+|+||.||+|.+. ++.||||.+... ....+.+|+..+..+ ||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 4578999999999999999999997 889999998753 244577888888888 9999999999999999999
Q ss_pred EEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCC-------------
Q 041031 81 VYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSN------------- 147 (313)
Q Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~------------- 147 (313)
||||+++++|.+++.... .....+++..++.++.|++.||.|||+++ ++|+||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~ 164 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENY-RIMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDED 164 (289)
T ss_dssp EEECCTTCBHHHHHHHHH-HHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC---------------
T ss_pred EEEecCCCcHHHHHHhhc-ccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCcccccccccc
Confidence 999999999999985221 11256899999999999999999999999 9999999999999844
Q ss_pred ------CcEEEeeccccccccCChhhhhhcccccccccccCCccccCC-CCCCccchhhHHHHHHHHHhCCCCccCCCCC
Q 041031 148 ------FRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG-CVTTKSDVYAFGVVLMELITGQQALSRDANP 220 (313)
Q Consensus 148 ------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~ 220 (313)
..++++|||.+....... ...+++.|+|||++.+. .++.++||||||+++|+|++|.+|+....
T Consensus 165 ~~~~~~~~~kl~Dfg~~~~~~~~~-------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-- 235 (289)
T 1x8b_A 165 DWASNKVMFKIGDLGHVTRISSPQ-------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD-- 235 (289)
T ss_dssp -----CCCEEECCCTTCEETTCSC-------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH--
T ss_pred cccCCceEEEEcccccccccCCcc-------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh--
Confidence 479999999988655322 23589999999999865 56789999999999999999987764221
Q ss_pred CCCccccchhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 221 GNNQYTEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
....+.. ..........+..+.+++.+||+.||.+|||+.++++.
T Consensus 236 ------------------------~~~~~~~---~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 236 ------------------------QWHEIRQ---GRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp ------------------------HHHHHHT---TCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred ------------------------HHHHHHc---CCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 0111111 11222233455678999999999999999999999863
No 208
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=9.3e-43 Score=300.89 Aligned_cols=249 Identities=22% Similarity=0.369 Sum_probs=196.4
Q ss_pred cCccccceeccCCeEEEEEeEEC--CcceEEEeccccc---cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEEeec
Q 041031 12 SNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK---SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVYEYA 85 (313)
Q Consensus 12 ~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~---~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~e~~ 85 (313)
++|.....||+|+||.||+|.+. +..||||.+.... .+.+.+|+.+++.+ ||||+++++++...+..++|||++
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 34555669999999999999986 7789999987543 45578999999999 999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCC-CCcEEEeeccccccccCC
Q 041031 86 QNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDS-NFRAKIADFGLVKLLEHS 164 (313)
Q Consensus 86 ~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~-~~~~~l~dfg~~~~~~~~ 164 (313)
++++|.+++.... ....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++. ++.++|+|||.+......
T Consensus 102 ~~~~L~~~l~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~ 176 (295)
T 2clq_A 102 PGGSLSALLRSKW--GPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI 176 (295)
T ss_dssp SEEEHHHHHHHTT--CCCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC-
T ss_pred CCCCHHHHHHhhc--cCCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCCC
Confidence 9999999985321 2345678889999999999999999999 999999999999987 899999999998865532
Q ss_pred hhhhhhcccccccccccCCccccCCC--CCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcCc
Q 041031 165 PEIAAAASRIVGTFGYLAPEYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDT 242 (313)
Q Consensus 165 ~~~~~~~~~~~~~~~~~aPE~~~~~~--~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (313)
.. ......+++.|+|||++.+.. ++.++||||||+++|+|++|..||...... ..
T Consensus 177 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---------~~----------- 233 (295)
T 2clq_A 177 NP---CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP---------QA----------- 233 (295)
T ss_dssp -------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSH---------HH-----------
T ss_pred CC---cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCch---------hH-----------
Confidence 21 223346899999999997643 789999999999999999999999644321 00
Q ss_pred HHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 243 KDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
...........+. .....+..+.+++.+||+.||++|||+.++++.
T Consensus 234 -~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 234 -AMFKVGMFKVHPE---IPESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp -HHHHHHHHCCCCC---CCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred -HHHhhcccccccc---ccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000001111111 233455678899999999999999999999863
No 209
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.2e-42 Score=312.41 Aligned_cols=265 Identities=18% Similarity=0.267 Sum_probs=199.4
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc--cHHHHHHHHHHHhc---------CCCceeeeeEEE----
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK--SKEFSSELKILCKV---------HSNLIELIGYAA---- 73 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~--~~~~~~e~~~l~~l---------h~~i~~~~~~~~---- 73 (313)
.++|++.++||+|+||.||+|++. ++.||||++.... .+.+.+|+.+++.+ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 468999999999999999999887 7889999997653 45678899999988 567999999987
Q ss_pred eCCeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcC-CCCceEEeccCCCCeeeCCCC----
Q 041031 74 GGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQY-TKPYYVHRDVKTSNILLDSNF---- 148 (313)
Q Consensus 74 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~-~~~~i~h~di~p~nil~~~~~---- 148 (313)
+....++|||++ +++|.+.+.. .....+++..++.++.|++.||+|||++ + ++|+||||+||+++.++
T Consensus 116 ~~~~~~lv~e~~-~~~l~~~~~~---~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~~~~~ 188 (397)
T 1wak_A 116 NGTHICMVFEVL-GHHLLKWIIK---SNYQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNEQYIR 188 (397)
T ss_dssp TEEEEEEEECCC-CCBHHHHHHH---TTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCHHHHH
T ss_pred CCceEEEEEecc-CccHHHHHHh---cccCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccchhhh
Confidence 556899999999 5566665531 2235689999999999999999999998 9 99999999999998775
Q ss_pred ---------------------------------------------cEEEeeccccccccCChhhhhhcccccccccccCC
Q 041031 149 ---------------------------------------------RAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAP 183 (313)
Q Consensus 149 ---------------------------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aP 183 (313)
.++|+|||.+...... .....+|+.|+||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~------~~~~~gt~~y~aP 262 (397)
T 1wak_A 189 RLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH------FTEDIQTRQYRSL 262 (397)
T ss_dssp HHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC------SCSCCSCGGGCCH
T ss_pred hhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc------CccCCCCCcccCC
Confidence 7999999998865432 2234689999999
Q ss_pred ccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcCcHHHHHHh----hhhcCC--C-
Q 041031 184 EYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDFMAKL----TECLDP--N- 256 (313)
Q Consensus 184 E~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~--~- 256 (313)
|++.+..++.++|||||||++|+|++|..||.......... .......+.......+.....- ...... .
T Consensus 263 E~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 339 (397)
T 1wak_A 263 EVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTR---DEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDL 339 (397)
T ss_dssp HHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCH---HHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSB
T ss_pred hhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCc---hHHHHHHHHHhcCCCChHHhhcccccccccCCcccc
Confidence 99999999999999999999999999999997655432111 1111111111111110000000 000000 0
Q ss_pred -----------------CCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 041031 257 -----------------LTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAI 291 (313)
Q Consensus 257 -----------------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 291 (313)
...........+.+|+.+||+.||.+|||+.|+++
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 340 KHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp SSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred ccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 00124566788999999999999999999999986
No 210
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=4.6e-43 Score=321.52 Aligned_cols=263 Identities=21% Similarity=0.299 Sum_probs=208.8
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEecccc-ccHHHHHHHHHHHhc--CCCceeeeeEEEeCCeEEEEEee
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT-KSKEFSSELKILCKV--HSNLIELIGYAAGGDSLFLVYEY 84 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~-~~~~~~~e~~~l~~l--h~~i~~~~~~~~~~~~~~lv~e~ 84 (313)
+.++|.+.++||+|+||.||+|.+. ++.||||++... ....+.+|+++++.+ ++++..+..++...+..++||||
T Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~ 84 (483)
T 3sv0_A 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL 84 (483)
T ss_dssp ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence 4578999999999999999999986 889999987644 345688999999999 46677777777888899999999
Q ss_pred cCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeee---CCCCcEEEeeccccccc
Q 041031 85 AQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILL---DSNFRAKIADFGLVKLL 161 (313)
Q Consensus 85 ~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~---~~~~~~~l~dfg~~~~~ 161 (313)
+ +++|.+++. .....+++..++.++.|++.||.|||+++ |+|+||||+|||+ +.++.+||+|||++...
T Consensus 85 ~-g~sL~~ll~----~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 156 (483)
T 3sv0_A 85 L-GPSLEDLFN----FCSRKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY 156 (483)
T ss_dssp C-CCBHHHHHH----HTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred C-CCCHHHHHH----hhcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCcceec
Confidence 9 899999985 23456999999999999999999999999 9999999999999 57889999999999876
Q ss_pred cCChhhh----hhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHH
Q 041031 162 EHSPEIA----AAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLA 237 (313)
Q Consensus 162 ~~~~~~~----~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 237 (313)
....... .......+|+.|+|||++.+..++.++|||||||++|+|++|..||....... ....+......
T Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~-----~~~~~~~i~~~ 231 (483)
T 3sv0_A 157 RDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGT-----KKQKYEKISEK 231 (483)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS-----HHHHHHHHHHH
T ss_pred cCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchh-----HHHHHHHHhhc
Confidence 5432211 11224578999999999999999999999999999999999999998755421 00111111111
Q ss_pred HhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhc
Q 041031 238 VFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILIS 299 (313)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 299 (313)
... ..+.. .....+..+.+|+..||+.+|.+||++.+|++.|+++...
T Consensus 232 ~~~------~~~~~--------l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 232 KVA------TSIEA--------LCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp HHH------SCHHH--------HHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred ccc------ccHHH--------HhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 100 00000 0112345788999999999999999999999999999774
No 211
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=5e-43 Score=301.70 Aligned_cols=248 Identities=24% Similarity=0.361 Sum_probs=200.3
Q ss_pred HHhcCccccceeccCCeEEEEEeEEC--CcceEEEecccc-----ccHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEE
Q 041031 9 DATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT-----KSKEFSSELKILCKV-HSNLIELIGYAAGGDSLFL 80 (313)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~-----~~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~l 80 (313)
...++|++.+.||+|+||.||+|.+. ++.||+|++... ....+.+|+++++.+ ||||+++++++.+.+..++
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 45678999999999999999999986 788999998643 345688999999999 9999999999999999999
Q ss_pred EEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCC---CcEEEeeccc
Q 041031 81 VYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSN---FRAKIADFGL 157 (313)
Q Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~---~~~~l~dfg~ 157 (313)
++|++.+++|.+.+. ....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.+ +.++|+|||+
T Consensus 99 v~e~~~~~~L~~~l~-----~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~ 170 (287)
T 2wei_A 99 VGELYTGGELFDEII-----KRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGL 170 (287)
T ss_dssp EECCCCSCBHHHHHH-----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTG
T ss_pred EEEccCCCCHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCc
Confidence 999999999998883 3356899999999999999999999999 9999999999999754 4699999999
Q ss_pred cccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHH
Q 041031 158 VKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLA 237 (313)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 237 (313)
+........ .....+++.|+|||++.+. ++.++||||||+++|+|++|..||......
T Consensus 171 ~~~~~~~~~----~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----------------- 228 (287)
T 2wei_A 171 STCFQQNTK----MKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEY----------------- 228 (287)
T ss_dssp GGTBCCCSS----CSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----------------
T ss_pred ceeecCCCc----cccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCCHH-----------------
Confidence 876543321 1223578899999998764 899999999999999999999999754321
Q ss_pred HhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 238 VFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
+....+...............+..+.+++.+||+.||.+|||+.++++.
T Consensus 229 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 229 ------DILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp ------HHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ------HHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 1111111111000001112345678899999999999999999999974
No 212
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=9.1e-43 Score=301.61 Aligned_cols=263 Identities=21% Similarity=0.345 Sum_probs=198.4
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVY 82 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~ 82 (313)
.++|++.+.||+|+||.||+|.+. ++.||||.+.... ...+.+|+.+++.+ ||||+++++++...+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence 478999999999999999999987 8899999986543 35678999999999 999999999999999999999
Q ss_pred eecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccccccc
Q 041031 83 EYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLE 162 (313)
Q Consensus 83 e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~ 162 (313)
|++. ++|.+++... ....+++..++.++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||.+....
T Consensus 82 e~~~-~~L~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 154 (299)
T 2r3i_A 82 EFLH-QDLKKFMDAS---ALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFG 154 (299)
T ss_dssp ECCS-EEHHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECSTTHHHHHC
T ss_pred Eccc-CCHHHHHHhh---hccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEECcchhhhhcc
Confidence 9996 6999988532 2246889999999999999999999999 9999999999999999999999999987654
Q ss_pred CChhhhhhcccccccccccCCccccCCC-CCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcC
Q 041031 163 HSPEIAAAASRIVGTFGYLAPEYVRDGC-VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFND 241 (313)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (313)
.... ......+++.|+|||++.+.. ++.++||||||+++|+|++|..||.+.... ..+..........
T Consensus 155 ~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--------~~~~~~~~~~~~~ 223 (299)
T 2r3i_A 155 VPVR---TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--------DQLFRIFRTLGTP 223 (299)
T ss_dssp CCSB---CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHHHCCC
T ss_pred CCcc---ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHH--------HHHHHHHHHhCCC
Confidence 3211 122335789999999998765 799999999999999999999999765421 1111111110000
Q ss_pred cHHHHHHhhh--hcCCCCCC--------CCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 041031 242 TKDFMAKLTE--CLDPNLTR--------YHKDSMLQMALLSKDCVDENWKRRPDMSNAAI 291 (313)
Q Consensus 242 ~~~~~~~l~~--~~~~~~~~--------~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 291 (313)
.......... ...+.... .....+..+.+|+.+||+.||++|||+.++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp CTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred chhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000000 00000000 01224567889999999999999999999987
No 213
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=5.8e-43 Score=333.41 Aligned_cols=239 Identities=26% Similarity=0.380 Sum_probs=199.9
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEecccc------ccHHHHHHHHHHHhc--CCCceeeeeEEEeCCeEE
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT------KSKEFSSELKILCKV--HSNLIELIGYAAGGDSLF 79 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~------~~~~~~~e~~~l~~l--h~~i~~~~~~~~~~~~~~ 79 (313)
..++|.+++.||+|+||.||+|+++ ++.||||+++.. ..+....|..++..+ ||+|+++++++.+.+.++
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4678999999999999999999987 677999998643 345577889999887 999999999999999999
Q ss_pred EEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccc
Q 041031 80 LVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVK 159 (313)
Q Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~ 159 (313)
+||||+++|+|.+++. ....+++..++.++.|++.||.|||+++ |+|+||||+|||++.+|.+||+|||++.
T Consensus 419 lV~E~~~gg~L~~~l~-----~~~~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~ 490 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQ-----QVGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK 490 (674)
T ss_dssp EEEECCCSCBHHHHHH-----HHSSCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCE
T ss_pred EEEeCcCCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceee
Confidence 9999999999999984 3456999999999999999999999999 9999999999999999999999999988
Q ss_pred cccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHh
Q 041031 160 LLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVF 239 (313)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (313)
...... .......||+.|+|||++.+..++.++||||||+++|+|++|..||.+.+..
T Consensus 491 ~~~~~~---~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~------------------- 548 (674)
T 3pfq_A 491 ENIWDG---VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED------------------- 548 (674)
T ss_dssp ECCCTT---CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH-------------------
T ss_pred ccccCC---cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH-------------------
Confidence 543322 2233457899999999999999999999999999999999999999764321
Q ss_pred cCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCH
Q 041031 240 NDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDM 286 (313)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~ 286 (313)
+....+ +...+ ......+..+.+|+++||+.||.+||++
T Consensus 549 ----~~~~~i---~~~~~-~~p~~~s~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 549 ----ELFQSI---MEHNV-AYPKSMSKEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp ----HHHHHH---HSSCC-CCCTTSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred ----HHHHHH---HhCCC-CCCccCCHHHHHHHHHHccCCHHHCCCC
Confidence 111111 11111 1233456678999999999999999997
No 214
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.8e-43 Score=315.47 Aligned_cols=267 Identities=22% Similarity=0.284 Sum_probs=196.6
Q ss_pred HHHHhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccccHHHHHHHHHHHhc-CCCceeeeeEEEe---------
Q 041031 7 VRDATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIELIGYAAG--------- 74 (313)
Q Consensus 7 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~~~~~~~e~~~l~~l-h~~i~~~~~~~~~--------- 74 (313)
++...++|++.+.||+|+||.||+|.+. ++.||||.+..+. ....+|+.+++.+ ||||+++++++..
T Consensus 2 l~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~ 80 (383)
T 3eb0_A 2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP-RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPP 80 (383)
T ss_dssp ----CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT-TSCCHHHHHHTTCCCTTBCCEEEEEEEC--------
T ss_pred CccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc-chHHHHHHHHHHcCCCCccchhheeeecCccccccc
Confidence 3456789999999999999999999986 8899999886543 3345799999999 9999999999844
Q ss_pred -----------------------------CCeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHh
Q 041031 75 -----------------------------GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIH 125 (313)
Q Consensus 75 -----------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh 125 (313)
....++||||++ ++|.+.+.... .....+++..++.++.|++.||+|||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 81 QPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFI-RSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp -----------------------------CCEEEEEECCCS-EEHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 334889999997 57777663211 23467899999999999999999999
Q ss_pred cCCCCceEEeccCCCCeeeC-CCCcEEEeeccccccccCChhhhhhcccccccccccCCccccCC-CCCCccchhhHHHH
Q 041031 126 QYTKPYYVHRDVKTSNILLD-SNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG-CVTTKSDVYAFGVV 203 (313)
Q Consensus 126 ~~~~~~i~h~di~p~nil~~-~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~DiwslG~~ 203 (313)
+.+ ++|+||||+||+++ .++.+||+|||++....... ......+++.|+|||++.+. .++.++||||+||+
T Consensus 159 ~~g---i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 231 (383)
T 3eb0_A 159 SLG---ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE----PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV 231 (383)
T ss_dssp TTT---EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS----CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred HCc---CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC----CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence 999 99999999999997 68899999999998654332 22234678999999998875 48999999999999
Q ss_pred HHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcCcHHHHHHhhh-hcCCCCC---C------CCHHHHHHHHHHHh
Q 041031 204 LMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDFMAKLTE-CLDPNLT---R------YHKDSMLQMALLSK 273 (313)
Q Consensus 204 l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~---~------~~~~~~~~l~~li~ 273 (313)
+|+|++|+.||.+.... ..+...+........+....... ....... . .....+..+.+|+.
T Consensus 232 l~ell~g~~pf~~~~~~--------~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 303 (383)
T 3eb0_A 232 FGELILGKPLFSGETSI--------DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLE 303 (383)
T ss_dssp HHHHHHSSCSSCCSSHH--------HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHH
T ss_pred HHHHHhCCCCCCCCChH--------HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHH
Confidence 99999999999765432 11222221111111111111100 0000000 0 12234567899999
Q ss_pred hccccCcCCCCCHHHHHH
Q 041031 274 DCVDENWKRRPDMSNAAI 291 (313)
Q Consensus 274 ~cl~~~p~~Rps~~~ll~ 291 (313)
+||+.||.+|||+.|+++
T Consensus 304 ~~L~~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 304 QILRYEPDLRINPYEAMA 321 (383)
T ss_dssp HHCCSSGGGSCCHHHHHT
T ss_pred HHccCChhhCCCHHHHhc
Confidence 999999999999999984
No 215
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=3.3e-43 Score=334.08 Aligned_cols=257 Identities=26% Similarity=0.391 Sum_probs=205.2
Q ss_pred HHHhcCccccceeccCCeEEEEEeEEC-----CcceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCe
Q 041031 8 RDATSNFSTSLKIGQGSYGSVYLGKLR-----GKNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAGGDS 77 (313)
Q Consensus 8 ~~~~~~y~~~~~lg~g~~g~v~~~~~~-----~~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~ 77 (313)
+...++|.+.+.||+|+||.||+|.+. +..+|||.+.... .+.+.+|+.+++.+ ||||+++++++.+ +.
T Consensus 386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~ 464 (656)
T 2j0j_A 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NP 464 (656)
T ss_dssp BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-Cc
Confidence 334577999999999999999999885 3458999987543 24577899999999 9999999999854 56
Q ss_pred EEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccc
Q 041031 78 LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGL 157 (313)
Q Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~ 157 (313)
.++||||+++|+|.+++. .....+++..++.++.|++.||.|||+++ ++|+||||+||+++.++.+||+|||+
T Consensus 465 ~~lv~E~~~~g~L~~~l~----~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~ 537 (656)
T 2j0j_A 465 VWIIMELCTLGELRSFLQ----VRKFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGL 537 (656)
T ss_dssp CEEEEECCTTCBHHHHHH----HTTTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCC
T ss_pred eEEEEEcCCCCcHHHHHH----hccCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCC
Confidence 899999999999999985 23456899999999999999999999999 99999999999999999999999999
Q ss_pred cccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchhHHHHHH
Q 041031 158 VKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLVDYML 236 (313)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 236 (313)
+........ .......+++.|+|||++.+..++.++||||||+++|+|++ |..||.+....
T Consensus 538 a~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~---------------- 599 (656)
T 2j0j_A 538 SRYMEDSTY--YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN---------------- 599 (656)
T ss_dssp CCSCCC------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH----------------
T ss_pred CeecCCCcc--eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH----------------
Confidence 987654322 12223356789999999998899999999999999999997 99999754321
Q ss_pred HHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhcc
Q 041031 237 AVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISS 300 (313)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 300 (313)
+....+...... ......+..+.+++.+||+.||.+|||+.++++.|+.+..+.
T Consensus 600 -------~~~~~i~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 600 -------DVIGRIENGERL---PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp -------HHHHHHHHTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -------HHHHHHHcCCCC---CCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 112222221111 123345568899999999999999999999999999987543
No 216
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.2e-42 Score=306.36 Aligned_cols=253 Identities=22% Similarity=0.336 Sum_probs=197.3
Q ss_pred HHhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc----cHHHHHHHHH-HHhc-CCCceeeeeEEEeCCeEEE
Q 041031 9 DATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK----SKEFSSELKI-LCKV-HSNLIELIGYAAGGDSLFL 80 (313)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~----~~~~~~e~~~-l~~l-h~~i~~~~~~~~~~~~~~l 80 (313)
...++|.+.+.||+|+||.||+|.+. ++.||||++.... ...+..|..+ ++.+ ||||+++++++.+.+..++
T Consensus 48 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~l 127 (340)
T 3an0_A 48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 127 (340)
T ss_dssp CCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEE
T ss_pred EehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEE
Confidence 34578999999999999999999985 8899999987543 2234455555 5555 9999999999999999999
Q ss_pred EEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcC-CCCceEEeccCCCCeeeCCCCcEEEeeccccc
Q 041031 81 VYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQY-TKPYYVHRDVKTSNILLDSNFRAKIADFGLVK 159 (313)
Q Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~-~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~ 159 (313)
||||+++ +|.+++.... .....+++..++.++.|++.||.|||++ + ++|+||||+||+++.++.++|+|||++.
T Consensus 128 v~e~~~~-~L~~~l~~~~-~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 202 (340)
T 3an0_A 128 CMELMDT-SLDKFYKQVI-DKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISG 202 (340)
T ss_dssp EECCCSE-EHHHHHHHHH-HTSCCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCSCCSTTEEECSTTCEEECCCSHHH
T ss_pred EHHHhhC-cHHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeCCCce
Confidence 9999965 9988874211 1356789999999999999999999987 9 9999999999999999999999999987
Q ss_pred cccCChhhhhhcccccccccccCCccccC----CCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHH
Q 041031 160 LLEHSPEIAAAASRIVGTFGYLAPEYVRD----GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYM 235 (313)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~----~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 235 (313)
....... .....+++.|+|||++.+ ..++.++|||||||++|+|++|..||...... .
T Consensus 203 ~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~----------~---- 264 (340)
T 3an0_A 203 YLVDSVA----KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP----------F---- 264 (340)
T ss_dssp HHSCHHH----HHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH----------H----
T ss_pred ecccccc----cccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch----------H----
Confidence 6543221 222368999999999753 46899999999999999999999999754321 0
Q ss_pred HHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 041031 236 LAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLS 294 (313)
Q Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~ 294 (313)
+..........+. ......+..+.+|+.+||+.||.+|||+.++++.-.
T Consensus 265 --------~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~ 313 (340)
T 3an0_A 265 --------QQLKQVVEEPSPQ--LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 313 (340)
T ss_dssp --------HHHHHHHHSCCCC--CCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHH
T ss_pred --------HHHHHHhcCCCCC--CCcccCCHHHHHHHHHHccCCcccCcCHHHHhcCcC
Confidence 0011111111111 122335677999999999999999999999997543
No 217
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=2e-43 Score=310.50 Aligned_cols=260 Identities=20% Similarity=0.323 Sum_probs=187.7
Q ss_pred HHhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc---cHHHHHHHHHHHhc--CCCceeeeeEEE--------
Q 041031 9 DATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK---SKEFSSELKILCKV--HSNLIELIGYAA-------- 73 (313)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~---~~~~~~e~~~l~~l--h~~i~~~~~~~~-------- 73 (313)
....+|++.++||+|+||.||+|.+. ++.||||.+.... ...+.+|+.+++.+ ||||+++++++.
T Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 104 (337)
T 3ll6_A 25 LGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT 104 (337)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred ccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence 34568999999999999999999985 8899999886543 34577899999998 999999999984
Q ss_pred eCCeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEe
Q 041031 74 GGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIA 153 (313)
Q Consensus 74 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~ 153 (313)
....++++||++. |+|.+++... .....+++..++.++.|++.||+|||+.+. +++|+||||+||+++.++.++|+
T Consensus 105 ~~~~~~lv~e~~~-g~L~~~l~~~--~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~-~ivH~Dikp~NIl~~~~~~~kl~ 180 (337)
T 3ll6_A 105 GQAEFLLLTELCK-GQLVEFLKKM--ESRGPLSCDTVLKIFYQTCRAVQHMHRQKP-PIIHRDLKVENLLLSNQGTIKLC 180 (337)
T ss_dssp SSEEEEEEEECCS-EEHHHHHHHH--HTTCSCCHHHHHHHHHHHHHHHHHHHTSSS-CCBCCCCCGGGCEECTTSCEEBC
T ss_pred CCceEEEEEEecC-CCHHHHHHHh--hccCCCCHHHHHHHHHHHHHHHHHHHhCCC-CEEEccCCcccEEECCCCCEEEe
Confidence 3445899999995 6898887421 134569999999999999999999999863 28999999999999999999999
Q ss_pred eccccccccCChhhh---------hhcccccccccccCCccc---cCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCC
Q 041031 154 DFGLVKLLEHSPEIA---------AAASRIVGTFGYLAPEYV---RDGCVTTKSDVYAFGVVLMELITGQQALSRDANPG 221 (313)
Q Consensus 154 dfg~~~~~~~~~~~~---------~~~~~~~~~~~~~aPE~~---~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~ 221 (313)
|||++.......... .......+++.|+|||++ .+..++.++||||||+++|+|++|..||.......
T Consensus 181 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~ 260 (337)
T 3ll6_A 181 DFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR 260 (337)
T ss_dssp CCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------
T ss_pred cCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH
Confidence 999998765432211 111134588999999998 56678999999999999999999999996433210
Q ss_pred CCccccchhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhccc
Q 041031 222 NNQYTEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSK 301 (313)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~ 301 (313)
.+....... ........+.+|+.+||+.||.+|||+.++++.|+.+.....
T Consensus 261 --------------------------~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~ 311 (337)
T 3ll6_A 261 --------------------------IVNGKYSIP---PHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARN 311 (337)
T ss_dssp -------------------------------CCCC---TTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred --------------------------hhcCcccCC---cccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccC
Confidence 000001100 111222347789999999999999999999999999987543
No 218
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.4e-43 Score=309.45 Aligned_cols=260 Identities=22% Similarity=0.340 Sum_probs=200.3
Q ss_pred HHHhcCccccceeccCCeEEEEEeEECCcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEE
Q 041031 8 RDATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLV 81 (313)
Q Consensus 8 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv 81 (313)
+...++|++.+.||+|+||.||+|.+.+ .+++|.+.... .+.+.+|+.+++.+ ||||+++++++.+.+..+++
T Consensus 29 ~i~~~~~~~~~~lg~G~~g~V~~~~~~~-~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv 107 (319)
T 2y4i_B 29 DIPFEQLEIGELIGKGRFGQVYHGRWHG-EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII 107 (319)
T ss_dssp SSCCSCEECCCBCCCSSSSEEEEEEESS-SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred cCCHHHeEEeeEeccCCceEEEEEEEcC-eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence 3346889999999999999999999875 59999986432 34567899999999 99999999999999999999
Q ss_pred EeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccc
Q 041031 82 YEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL 161 (313)
Q Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~ 161 (313)
|||+++++|.+++. .....+++..++.++.|++.||+|||+.+ ++|+||+|+||+++ ++.++|+|||++...
T Consensus 108 ~e~~~~~~L~~~l~----~~~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~ 179 (319)
T 2y4i_B 108 TSLCKGRTLYSVVR----DAKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSIS 179 (319)
T ss_dssp CBCCCSEEHHHHTT----SSCCCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCCC--
T ss_pred eecccCCcHHHHHH----hcCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCCcccc
Confidence 99999999999995 23456899999999999999999999999 99999999999998 679999999997754
Q ss_pred cCChh--hhhhcccccccccccCCccccC---------CCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchh
Q 041031 162 EHSPE--IAAAASRIVGTFGYLAPEYVRD---------GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRS 230 (313)
Q Consensus 162 ~~~~~--~~~~~~~~~~~~~~~aPE~~~~---------~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~ 230 (313)
..... .........+++.|+|||++.+ ..++.++||||||+++|+|++|..||......
T Consensus 180 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---------- 249 (319)
T 2y4i_B 180 GVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE---------- 249 (319)
T ss_dssp --------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH----------
T ss_pred ccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----------
Confidence 32211 1122223458899999999974 34788999999999999999999999654321
Q ss_pred HHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhccc
Q 041031 231 LVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSK 301 (313)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~ 301 (313)
+....+.....+... ....+..+.+++.+||+.||.+|||+.++++.|+.+.....
T Consensus 250 -------------~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~ 305 (319)
T 2y4i_B 250 -------------AIIWQMGTGMKPNLS--QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNR 305 (319)
T ss_dssp -------------HHHHHHHTTCCCCCC--CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-----
T ss_pred -------------HHHHHhccCCCCCCC--cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhc
Confidence 111112222222211 11234568899999999999999999999999999887543
No 219
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.9e-43 Score=306.33 Aligned_cols=264 Identities=25% Similarity=0.367 Sum_probs=186.7
Q ss_pred HHhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEE
Q 041031 9 DATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLV 81 (313)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv 81 (313)
...++|.+.+.||+|+||.||+|.+. ++.||||.+.... .+.+.+|+.+++.+ ||||+++++++...+..++|
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 34679999999999999999999875 7899999987542 44577889999999 99999999999999999999
Q ss_pred EeecCCCChhhhhcCCC---CCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccc
Q 041031 82 YEYAQNGALSDHLHWPS---VKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLV 158 (313)
Q Consensus 82 ~e~~~~~~L~~~l~~~~---~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~ 158 (313)
|||+++++|.+++.... ......+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||.+
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVS 168 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEeccch
Confidence 99999999999884211 113456899999999999999999999999 999999999999999999999999998
Q ss_pred ccccCChhh--hhhcccccccccccCCccccC-CCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHH
Q 041031 159 KLLEHSPEI--AAAASRIVGTFGYLAPEYVRD-GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYM 235 (313)
Q Consensus 159 ~~~~~~~~~--~~~~~~~~~~~~~~aPE~~~~-~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 235 (313)
......... ........+++.|+|||++.+ ..++.++||||||+++|+|++|..||....... .. .
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--------~~---~ 237 (303)
T 2vwi_A 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK--------VL---M 237 (303)
T ss_dssp HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG--------HH---H
T ss_pred heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh--------HH---H
Confidence 765432211 112223468999999999975 568999999999999999999999997644310 00 0
Q ss_pred HHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 236 LAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
........... ...... ......+..+.+++.+||+.||.+|||+.++++.
T Consensus 238 ~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 238 LTLQNDPPSLE---TGVQDK---EMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp HHHTSSCCCTT---C--------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHhccCCCccc---cccccc---hhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00000000000 000000 0122344578899999999999999999999863
No 220
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=4.5e-43 Score=312.09 Aligned_cols=259 Identities=22% Similarity=0.311 Sum_probs=183.5
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEeC------
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAGG------ 75 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~------ 75 (313)
+.++|++.+.||+|+||.||+|.+. ++.||||++.... ...+.+|+.+++.+ ||||+++++++...
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 3578999999999999999999886 7899999986532 34577899999999 99999999998654
Q ss_pred CeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeec
Q 041031 76 DSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADF 155 (313)
Q Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df 155 (313)
...++++|++ +++|.+++. ...+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+||
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~------~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DF 176 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVK------CQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDF 176 (367)
T ss_dssp CCCEEEEECC-CEECC-----------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC-
T ss_pred CeEEEEeccc-CCCHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeec
Confidence 5689999999 789998873 256899999999999999999999999 999999999999999999999999
Q ss_pred cccccccCChhhhhhcccccccccccCCccccC-CCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHH
Q 041031 156 GLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRD-GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDY 234 (313)
Q Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~ 234 (313)
|++...... .....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+.. ..+...
T Consensus 177 G~a~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--------~~l~~i 242 (367)
T 2fst_X 177 GLARHTADE------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI--------DQLKLI 242 (367)
T ss_dssp --------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHH
T ss_pred ccccccccc------CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHH
Confidence 998764432 223468999999999987 67899999999999999999999999765431 111111
Q ss_pred HHHHhcCcHHHH--------HHhhhhcCCCCC----CCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 235 MLAVFNDTKDFM--------AKLTECLDPNLT----RYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 235 ~~~~~~~~~~~~--------~~l~~~~~~~~~----~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
.........+.. ......+..... ......+..+.+|+.+||..||.+|||+.++++.
T Consensus 243 ~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 243 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 111111111111 001111110000 0112234678899999999999999999999875
No 221
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=3.2e-43 Score=306.57 Aligned_cols=257 Identities=23% Similarity=0.340 Sum_probs=197.1
Q ss_pred cChHHHHHHhcCccccceeccCCeEEEEEeEEC-CcceEEEeccccc-----cHHHHHHHHHHHhc---CCCceeeeeEE
Q 041031 2 FSYNEVRDATSNFSTSLKIGQGSYGSVYLGKLR-GKNAAIKQMKNTK-----SKEFSSELKILCKV---HSNLIELIGYA 72 (313)
Q Consensus 2 ~~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~-~~~~aiK~~~~~~-----~~~~~~e~~~l~~l---h~~i~~~~~~~ 72 (313)
|+++.+....++|++.+.||+|+||.||+|.+. ++.+|||.+.... .+.+.+|+.+++.+ ||||+++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~ 97 (313)
T 3cek_A 18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 97 (313)
T ss_dssp --CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence 344555556788999999999999999999887 7889999986432 34578899999999 49999999999
Q ss_pred EeCCeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEE
Q 041031 73 AGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKI 152 (313)
Q Consensus 73 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l 152 (313)
.+.+..+++|| +.+++|.+++. ....+++..++.++.|++.||.|||+++ ++|+||+|+||++++ +.++|
T Consensus 98 ~~~~~~~lv~e-~~~~~L~~~l~-----~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~-~~~kL 167 (313)
T 3cek_A 98 ITDQYIYMVME-CGNIDLNSWLK-----KKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD-GMLKL 167 (313)
T ss_dssp ECSSEEEEEEC-CCSEEHHHHHH-----HCSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEET-TEEEE
T ss_pred ecCCEEEEEEe-cCCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEEC-CeEEE
Confidence 99999999999 45889999984 3457899999999999999999999999 999999999999965 78999
Q ss_pred eeccccccccCChhhhhhcccccccccccCCccccC-----------CCCCCccchhhHHHHHHHHHhCCCCccCCCCCC
Q 041031 153 ADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRD-----------GCVTTKSDVYAFGVVLMELITGQQALSRDANPG 221 (313)
Q Consensus 153 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-----------~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~ 221 (313)
+|||++......... .......+++.|+|||++.+ ..++.++||||||+++|+|++|..||......
T Consensus 168 ~Dfg~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~- 245 (313)
T 3cek_A 168 IDFGIANQMQPDTTS-VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ- 245 (313)
T ss_dssp CCCSSSCC---------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH-
T ss_pred eeccccccccCcccc-ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH-
Confidence 999998865533221 12223468999999999875 46788999999999999999999999643321
Q ss_pred CCccccchhHHHHHHHHhcCcHHHHHHhhhhcCCCCCC-CCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 041031 222 NNQYTEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTR-YHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLS 294 (313)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~ 294 (313)
...+....++.... .....+..+.+++.+||+.||.+|||+.++++.-.
T Consensus 246 ------------------------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~ 295 (313)
T 3cek_A 246 ------------------------ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPY 295 (313)
T ss_dssp ------------------------HHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred ------------------------HHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCcc
Confidence 11111112221111 12223457889999999999999999999997543
No 222
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.1e-42 Score=300.13 Aligned_cols=251 Identities=21% Similarity=0.278 Sum_probs=196.3
Q ss_pred HHhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc-------cHHHHHHHHHHHhc-CCCceeeeeEEE--eCC
Q 041031 9 DATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK-------SKEFSSELKILCKV-HSNLIELIGYAA--GGD 76 (313)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~-------~~~~~~e~~~l~~l-h~~i~~~~~~~~--~~~ 76 (313)
...++|.+.+.||+|+||.||+|.+. ++.+|+|++.... ...+.+|+.+++.+ ||||+++++++. +.+
T Consensus 2 ~l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (305)
T 2wtk_C 2 KLIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQ 81 (305)
T ss_dssp ---CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---
T ss_pred ccccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCC
Confidence 35689999999999999999999986 7789999987532 45688999999999 999999999984 456
Q ss_pred eEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecc
Q 041031 77 SLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFG 156 (313)
Q Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg 156 (313)
..++||||+.++ |.+++... ....+++..++.++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||
T Consensus 82 ~~~lv~e~~~~~-l~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg 154 (305)
T 2wtk_C 82 KMYMVMEYCVCG-MQEMLDSV---PEKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALG 154 (305)
T ss_dssp CEEEEEECCSEE-HHHHHHHS---TTCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCT
T ss_pred eEEEEehhccCC-HHHHHHhC---cccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeeccc
Confidence 789999999765 77766422 2457899999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCChhhhhhcccccccccccCCccccCCC--CCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHH
Q 041031 157 LVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC--VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDY 234 (313)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~--~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~ 234 (313)
.+........ ........+++.|+|||++.+.. ++.++||||||+++|+|++|..||......
T Consensus 155 ~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------------- 219 (305)
T 2wtk_C 155 VAEALHPFAA-DDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY-------------- 219 (305)
T ss_dssp TCEECCTTCS-SCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH--------------
T ss_pred cccccCcccc-ccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH--------------
Confidence 9886543211 12223446899999999998644 377999999999999999999999754321
Q ss_pred HHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 041031 235 MLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLS 294 (313)
Q Consensus 235 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~ 294 (313)
+....+.... . ......+..+.+++.+||+.||.+|||+.++++.-.
T Consensus 220 ---------~~~~~i~~~~-~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~ 266 (305)
T 2wtk_C 220 ---------KLFENIGKGS-Y---AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSW 266 (305)
T ss_dssp ---------HHHHHHHHCC-C---CCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHH
T ss_pred ---------HHHHHHhcCC-C---CCCCccCHHHHHHHHHHccCChhhCCCHHHHhcCcc
Confidence 1111111111 1 112234567889999999999999999999997543
No 223
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=9.2e-43 Score=304.12 Aligned_cols=265 Identities=22% Similarity=0.304 Sum_probs=192.5
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc---cHHHHHHHHHHHhc-CCCceeeeeEEE----------
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK---SKEFSSELKILCKV-HSNLIELIGYAA---------- 73 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~---~~~~~~e~~~l~~l-h~~i~~~~~~~~---------- 73 (313)
..++|.+.+.||+|+||.||+|.+. ++.||+|.+.... .+.+.+|+.+++.+ ||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 88 (320)
T 2i6l_A 9 LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV 88 (320)
T ss_dssp ETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred cCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence 3578999999999999999999998 7899999887554 34577899999999 999999999873
Q ss_pred ----eCCeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeC-CCC
Q 041031 74 ----GGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLD-SNF 148 (313)
Q Consensus 74 ----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~-~~~ 148 (313)
+.+..++||||++ ++|.+++. ...+++..++.++.|++.||+|||+++ ++|+||||+||+++ +++
T Consensus 89 ~~~~~~~~~~lv~e~~~-~~L~~~~~------~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~ 158 (320)
T 2i6l_A 89 GSLTELNSVYIVQEYME-TDLANVLE------QGPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDL 158 (320)
T ss_dssp --CCSCSEEEEEEECCS-EEHHHHHT------TCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTT
T ss_pred ccccccCceeEEeeccC-CCHHHHhh------cCCccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCC
Confidence 4468899999996 69999983 256889999999999999999999999 99999999999997 567
Q ss_pred cEEEeeccccccccCChhhhhhcccccccccccCCccccC-CCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCcccc
Q 041031 149 RAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRD-GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTE 227 (313)
Q Consensus 149 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~ 227 (313)
.++|+|||++.................++..|+|||++.+ ..++.++||||||+++|+|++|+.||.+....
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~------- 231 (320)
T 2i6l_A 159 VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL------- 231 (320)
T ss_dssp EEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-------
T ss_pred eEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH-------
Confidence 9999999999876533222222333457899999998875 67899999999999999999999999765421
Q ss_pred chhHHHHHHHHhcCcHHHHHHhhh--------hcC-CC--CCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 228 HRSLVDYMLAVFNDTKDFMAKLTE--------CLD-PN--LTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~l~~--------~~~-~~--~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
...............+....+.. ... +. +.......+..+.+|+++||+.||.+|||+.++++.
T Consensus 232 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 232 -EQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp -HHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred -HHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 11111111111111111111000 000 00 000122345678999999999999999999999874
No 224
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=2.5e-42 Score=303.65 Aligned_cols=261 Identities=19% Similarity=0.306 Sum_probs=201.5
Q ss_pred HhcCccccceeccCCeEEEEEeEEC---CcceEEEeccccc--cHHHHHHHHHHHhc-CC------CceeeeeEEEeCCe
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR---GKNAAIKQMKNTK--SKEFSSELKILCKV-HS------NLIELIGYAAGGDS 77 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~---~~~~aiK~~~~~~--~~~~~~e~~~l~~l-h~------~i~~~~~~~~~~~~ 77 (313)
..++|++.+.||+|+||.||+|.+. ++.||||++.... .+.+.+|+.+++.+ |+ +++++++++...+.
T Consensus 12 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred ccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 3578999999999999999999873 7789999997643 45678899999988 54 49999999999999
Q ss_pred EEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCC-----------
Q 041031 78 LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDS----------- 146 (313)
Q Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~----------- 146 (313)
.++|||++ +++|.+++... ....+++..++.++.|++.||+|||+++ ++|+||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~ 164 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKEN---GFLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKI 164 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC---
T ss_pred EEEEEcCC-CCCHHHHHHhc---CCCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCcc
Confidence 99999999 88999998522 2246889999999999999999999999 999999999999987
Q ss_pred --------CCcEEEeeccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCC
Q 041031 147 --------NFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDA 218 (313)
Q Consensus 147 --------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~ 218 (313)
++.++|+|||++...... .....+|+.|+|||++.+..++.++|||||||++|+|++|..||....
T Consensus 165 ~~~~~~~~~~~~kl~Dfg~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 238 (339)
T 1z57_A 165 KRDERTLINPDIKVVDFGSATYDDEH------HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD 238 (339)
T ss_dssp -CEEEEESCCCEEECCCSSCEETTSC------CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSC
T ss_pred ccccccccCCCceEeeCcccccCccc------cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence 668999999998764432 223468999999999999999999999999999999999999997543
Q ss_pred CCCCCccccchhHHHHHHHHhcC-cHHHH-----------------------HHhhhhcCCC--CCCCCHHHHHHHHHHH
Q 041031 219 NPGNNQYTEHRSLVDYMLAVFND-TKDFM-----------------------AKLTECLDPN--LTRYHKDSMLQMALLS 272 (313)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----------------------~~l~~~~~~~--~~~~~~~~~~~l~~li 272 (313)
.. .....+...... ..... ..+.....+. ........+..+.+|+
T Consensus 239 ~~---------~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 309 (339)
T 1z57_A 239 SK---------EHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLI 309 (339)
T ss_dssp HH---------HHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHH
T ss_pred hH---------HHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHH
Confidence 31 111111111110 10100 0011111100 0112345567899999
Q ss_pred hhccccCcCCCCCHHHHHHH
Q 041031 273 KDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 273 ~~cl~~~p~~Rps~~~ll~~ 292 (313)
.+||+.||.+|||+.|+++.
T Consensus 310 ~~~L~~dP~~Rpt~~ell~h 329 (339)
T 1z57_A 310 QKMLEYDPAKRITLREALKH 329 (339)
T ss_dssp HHHTCSSTTTSCCHHHHTTS
T ss_pred HHHhCcCcccccCHHHHhcC
Confidence 99999999999999999863
No 225
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-42 Score=314.76 Aligned_cols=248 Identities=21% Similarity=0.318 Sum_probs=188.8
Q ss_pred cCccccceeccCCeEE-EEEeEECCcceEEEeccccccHHHHHHHHHHHhc--CCCceeeeeEEEeCCeEEEEEeecCCC
Q 041031 12 SNFSTSLKIGQGSYGS-VYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV--HSNLIELIGYAAGGDSLFLVYEYAQNG 88 (313)
Q Consensus 12 ~~y~~~~~lg~g~~g~-v~~~~~~~~~~aiK~~~~~~~~~~~~e~~~l~~l--h~~i~~~~~~~~~~~~~~lv~e~~~~~ 88 (313)
.+|.+.+.||+|+||. ++++...++.||||.+.........+|+.+++.+ ||||+++++++.+.+..++|||++. +
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g 102 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-A 102 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-C
Confidence 4689999999999998 4555666999999999887777788999999998 9999999999999999999999995 6
Q ss_pred ChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCC-----CCcEEEeeccccccccC
Q 041031 89 ALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDS-----NFRAKIADFGLVKLLEH 163 (313)
Q Consensus 89 ~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~-----~~~~~l~dfg~~~~~~~ 163 (313)
+|.+++... ........++.++.|++.||.|||+.+ |+|+||||+||+++. ...++|+|||++.....
T Consensus 103 ~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 103 TLQEYVEQK----DFAHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp EHHHHHHSS----SCCCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred CHHHHHHhc----CCCccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 999998532 233444456789999999999999999 999999999999953 23578999999987654
Q ss_pred ChhhhhhcccccccccccCCcccc---CCCCCCccchhhHHHHHHHHHh-CCCCccCCCCCCCCccccchhHHHHHHHHh
Q 041031 164 SPEIAAAASRIVGTFGYLAPEYVR---DGCVTTKSDVYAFGVVLMELIT-GQQALSRDANPGNNQYTEHRSLVDYMLAVF 239 (313)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~aPE~~~---~~~~~~~~DiwslG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (313)
............+|+.|+|||++. ...++.++|||||||++|+|++ |..||......
T Consensus 176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~------------------- 236 (432)
T 3p23_A 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR------------------- 236 (432)
T ss_dssp ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH-------------------
T ss_pred CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH-------------------
Confidence 332222333456899999999997 4567889999999999999999 89999643321
Q ss_pred cCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 041031 240 NDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAI 291 (313)
Q Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 291 (313)
....+..................+.+|+.+||+.||.+|||+.++++
T Consensus 237 -----~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 237 -----QANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp -----HHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -----HHHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 11111111111111123445566889999999999999999999984
No 226
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.1e-42 Score=301.33 Aligned_cols=251 Identities=25% Similarity=0.395 Sum_probs=191.9
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc--cHHHHHHHHHHHhc-CCCceeeeeEEEe----------
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK--SKEFSSELKILCKV-HSNLIELIGYAAG---------- 74 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~--~~~~~~e~~~l~~l-h~~i~~~~~~~~~---------- 74 (313)
..++|++.+.||+|+||.||+|.+. ++.||||.+.... .+.+.+|+.+++.+ ||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 4678999999999999999999986 8889999986543 45578899999999 9999999998865
Q ss_pred ---CCeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEE
Q 041031 75 ---GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAK 151 (313)
Q Consensus 75 ---~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~ 151 (313)
.+..++||||+++++|.+++. .....+++..++.++.|++.||+|||+++ ++|+||+|+||+++.++.++
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~----~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~k 156 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIH----SENLNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVK 156 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHH----HSCGGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEE
T ss_pred cccCCceEEEEecCCCCCHHHhhh----ccccccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEE
Confidence 356899999999999999995 23456788999999999999999999999 99999999999999999999
Q ss_pred EeeccccccccCChhh-----------hhhcccccccccccCCccccCC-CCCCccchhhHHHHHHHHHhCCCCccCCCC
Q 041031 152 IADFGLVKLLEHSPEI-----------AAAASRIVGTFGYLAPEYVRDG-CVTTKSDVYAFGVVLMELITGQQALSRDAN 219 (313)
Q Consensus 152 l~dfg~~~~~~~~~~~-----------~~~~~~~~~~~~~~aPE~~~~~-~~~~~~DiwslG~~l~~~~tg~~p~~~~~~ 219 (313)
|+|||.+......... ........+++.|+|||++.+. .++.++||||||+++|+|++ ||.....
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~ 233 (303)
T 1zy4_A 157 IGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGME 233 (303)
T ss_dssp ECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHH
T ss_pred EeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchh
Confidence 9999998765432110 1122234688999999999864 68999999999999999998 4431110
Q ss_pred CCCCccccchhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 220 PGNNQYTEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
.. +....+...............+..+.+++.+||+.||.+|||+.++++.
T Consensus 234 -----------~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 234 -----------RV-----------NILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp -----------HH-----------HHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -----------HH-----------HHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 00 1111111111111111344555678899999999999999999999974
No 227
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=5.3e-44 Score=319.49 Aligned_cols=239 Identities=17% Similarity=0.163 Sum_probs=184.5
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEecccc------ccHHHHHHHHHHHh---c-CCCceeee-------eE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT------KSKEFSSELKILCK---V-HSNLIELI-------GY 71 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~------~~~~~~~e~~~l~~---l-h~~i~~~~-------~~ 71 (313)
.++|.+.+.||+|+||.||+|.+. ++.||||++... ..+.+.+|+.+++. + ||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 467999999999999999999976 889999998632 23567889955444 4 99999998 66
Q ss_pred EEeCC-----------------eEEEEEeecCCCChhhhhcCCCC--CCCCCccHHHHHHHHHHHHHHHHHHhcCCCCce
Q 041031 72 AAGGD-----------------SLFLVYEYAQNGALSDHLHWPSV--KGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132 (313)
Q Consensus 72 ~~~~~-----------------~~~lv~e~~~~~~L~~~l~~~~~--~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i 132 (313)
+.+.+ ..+++|||+ +|+|.+++..... .....+++..++.++.|++.||+|||+++ |
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---L 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence 66553 278999999 6799999853211 11233455888899999999999999999 9
Q ss_pred EEeccCCCCeeeCCCCcEEEeeccccccccCChhhhhhcccccccccccCCccccCC-----------CCCCccchhhHH
Q 041031 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDG-----------CVTTKSDVYAFG 201 (313)
Q Consensus 133 ~h~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-----------~~~~~~DiwslG 201 (313)
+|+||||+||+++.++.+||+|||++..... ......+ +.|+|||++.+. .++.++||||||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG 300 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA------RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALG 300 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC------EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC------cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHH
Confidence 9999999999999999999999999885332 2223456 999999999877 899999999999
Q ss_pred HHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcC
Q 041031 202 VVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWK 281 (313)
Q Consensus 202 ~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~ 281 (313)
|++|+|++|..||......... ..... .....+..+.+|+.+||+.||.
T Consensus 301 ~il~elltg~~Pf~~~~~~~~~--------------------------~~~~~-----~~~~~~~~~~~li~~~L~~dp~ 349 (377)
T 3byv_A 301 LVIYWIWCADLPITKDAALGGS--------------------------EWIFR-----SCKNIPQPVRALLEGFLRYPKE 349 (377)
T ss_dssp HHHHHHHHSSCCC------CCS--------------------------GGGGS-----SCCCCCHHHHHHHHHHTCSSGG
T ss_pred HHHHHHHHCCCCCcccccccch--------------------------hhhhh-----hccCCCHHHHHHHHHHcCCCch
Confidence 9999999999999755432100 00000 0112345788999999999999
Q ss_pred CCCCHHHHHH
Q 041031 282 RRPDMSNAAI 291 (313)
Q Consensus 282 ~Rps~~~ll~ 291 (313)
+|||+.++++
T Consensus 350 ~Rpt~~e~l~ 359 (377)
T 3byv_A 350 DRLLPLQAME 359 (377)
T ss_dssp GCCCHHHHHT
T ss_pred hCCCHHHHhh
Confidence 9999999986
No 228
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=3.7e-42 Score=305.52 Aligned_cols=270 Identities=20% Similarity=0.267 Sum_probs=190.4
Q ss_pred HHHHHhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc--cHHHHHHHHHHHhc-CCCceeeeeEEEeCCe---
Q 041031 6 EVRDATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK--SKEFSSELKILCKV-HSNLIELIGYAAGGDS--- 77 (313)
Q Consensus 6 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~--~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~--- 77 (313)
......++|++.+.||+|+||.||+|.+. ++.||||.+.... .....++++.+..+ ||||+++++++.....
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~ 96 (360)
T 3e3p_A 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDR 96 (360)
T ss_dssp HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCT
T ss_pred hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccc
Confidence 45677899999999999999999999987 7889999885542 34456777888888 9999999999865433
Q ss_pred ----EEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHh--cCCCCceEEeccCCCCeeeCC-CCcE
Q 041031 78 ----LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIH--QYTKPYYVHRDVKTSNILLDS-NFRA 150 (313)
Q Consensus 78 ----~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh--~~~~~~i~h~di~p~nil~~~-~~~~ 150 (313)
.++||||+++ +|.+.+.... .....+++..++.++.|++.||.||| +.+ ++|+||||+||+++. ++.+
T Consensus 97 ~~~~~~lv~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~~~ 171 (360)
T 3e3p_A 97 RDIYLNVVMEYVPD-TLHRCCRNYY-RRQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADGTL 171 (360)
T ss_dssp TCEEEEEEEECCSC-BHHHHHHHHH-TTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTTEE
T ss_pred cceeEEEEeecccc-cHHHHHHHHh-hcccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCCcE
Confidence 7899999976 5544432110 34567889999999999999999999 999 999999999999996 8999
Q ss_pred EEeeccccccccCChhhhhhcccccccccccCCccccCCC-CCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccch
Q 041031 151 KIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGC-VTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHR 229 (313)
Q Consensus 151 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~ 229 (313)
+|+|||++....... ......+|+.|+|||++.+.. ++.++|||||||++|+|++|..||.+.... .
T Consensus 172 kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~--------~ 239 (360)
T 3e3p_A 172 KLCDFGSAKKLSPSE----PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA--------G 239 (360)
T ss_dssp EECCCTTCBCCCTTS----CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------H
T ss_pred EEeeCCCceecCCCC----CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH--------H
Confidence 999999998765432 222346799999999997654 899999999999999999999999765431 1
Q ss_pred hHHHHHHHHhcCcHHHHHHhhhhcC-------CC------CCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 230 SLVDYMLAVFNDTKDFMAKLTECLD-------PN------LTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~l~~~~~-------~~------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
.+............+....+..... .. ........+..+.+|+.+||+.||.+|||+.|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 240 QLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 2222222221222222211110000 00 001122246789999999999999999999999974
No 229
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=2.8e-43 Score=314.12 Aligned_cols=247 Identities=9% Similarity=0.000 Sum_probs=180.5
Q ss_pred cCccccceeccCCeEEEEEeEEC--CcceEEEeccccc------cHHHHHHHHHHHhc---CCCceeee-------eEEE
Q 041031 12 SNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK------SKEFSSELKILCKV---HSNLIELI-------GYAA 73 (313)
Q Consensus 12 ~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~------~~~~~~e~~~l~~l---h~~i~~~~-------~~~~ 73 (313)
.+|.+.+.||+|+||.||+|.+. ++.||||++.... .+.+.+|+.+++.+ |||+++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 45999999999999999999987 7889999998743 33466787777777 99987755 4444
Q ss_pred eC-----------------CeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHH------HHHHHHHHHHHHHHhcCCCC
Q 041031 74 GG-----------------DSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTR------VQIALDAAKGLEYIHQYTKP 130 (313)
Q Consensus 74 ~~-----------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~------~~~~~~i~~~l~~lh~~~~~ 130 (313)
.. ..+++||||++ ++|.+++... ...+..... +.++.|++.||+|||+++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~----~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~-- 214 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL----DFVYVFRGDEGILALHILTAQLIRLAANLQSKG-- 214 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH----HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT--
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh----ccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC--
Confidence 33 34899999997 8999999532 223344444 677799999999999999
Q ss_pred ceEEeccCCCCeeeCCCCcEEEeeccccccccCChhhhhhcccccccccccCCccccC--CCCCCccchhhHHHHHHHHH
Q 041031 131 YYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRD--GCVTTKSDVYAFGVVLMELI 208 (313)
Q Consensus 131 ~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~~DiwslG~~l~~~~ 208 (313)
|+|+||||+||+++.++.+||+|||++....... ....+++.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 215 -ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~ell 287 (371)
T 3q60_A 215 -LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRG------PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVW 287 (371)
T ss_dssp -EEETTCSGGGEEECTTSCEEECCGGGEEETTCEE------EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHH
T ss_pred -CccCcCCHHHEEECCCCCEEEEecceeeecCCCc------cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHH
Confidence 9999999999999999999999999998654321 12356799999999987 67899999999999999999
Q ss_pred hCCCCccCCCCCCCCccccchhHHHHHHHHhcCcHHHHHHhhhhcCCCCCC-CCHHHHHHHHHHHhhccccCcCCCCCHH
Q 041031 209 TGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTR-YHKDSMLQMALLSKDCVDENWKRRPDMS 287 (313)
Q Consensus 209 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~ 287 (313)
+|..||..........+..... .......... .....+..+.+|+.+||+.||++|||+.
T Consensus 288 tg~~Pf~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 348 (371)
T 3q60_A 288 CLFLPFGLVTPGIKGSWKRPSL-------------------RVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPL 348 (371)
T ss_dssp HSSCSTTBCCTTCTTCCCBCCT-------------------TSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHH
T ss_pred hCCCCCCCcCcccccchhhhhh-------------------hhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHH
Confidence 9999998764432111110000 0000000000 1224566889999999999999999999
Q ss_pred HHHH
Q 041031 288 NAAI 291 (313)
Q Consensus 288 ~ll~ 291 (313)
++++
T Consensus 349 e~l~ 352 (371)
T 3q60_A 349 EAME 352 (371)
T ss_dssp HHTT
T ss_pred HHhc
Confidence 9975
No 230
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=8.9e-43 Score=305.63 Aligned_cols=254 Identities=22% Similarity=0.338 Sum_probs=178.5
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEecccccc----HHHHHHHH-HHHhc-CCCceeeeeEEEeCCeEEEEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTKS----KEFSSELK-ILCKV-HSNLIELIGYAAGGDSLFLVY 82 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~~----~~~~~e~~-~l~~l-h~~i~~~~~~~~~~~~~~lv~ 82 (313)
.++|.+.+.||+|+||.||+|.+. ++.||||.+..... ..+..|+. +++.+ ||||+++++++.+.+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 578999999999999999999997 88999999876432 23445555 55555 999999999999999999999
Q ss_pred eecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcC-CCCceEEeccCCCCeeeCCCCcEEEeeccccccc
Q 041031 83 EYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQY-TKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL 161 (313)
Q Consensus 83 e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~-~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~ 161 (313)
||+.+ +|.+++..........+++..++.++.|++.||.|||+. + ++|+||+|+||+++.++.+||+|||++...
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 99965 888877422222356789999999999999999999999 9 999999999999999999999999998765
Q ss_pred cCChhhhhhcccccccccccCCccc----cCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHH
Q 041031 162 EHSPEIAAAASRIVGTFGYLAPEYV----RDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLA 237 (313)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~aPE~~----~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 237 (313)
.... ......+++.|+|||++ .+..++.++||||||+++|+|++|..||.......
T Consensus 177 ~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---------------- 236 (327)
T 3aln_A 177 VDSI----AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF---------------- 236 (327)
T ss_dssp ---------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------------------
T ss_pred cccc----ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH----------------
Confidence 4332 12223688999999999 45678999999999999999999999997543210
Q ss_pred HhcCcHHHHHHhhhhcCCCCCC-CCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHH
Q 041031 238 VFNDTKDFMAKLTECLDPNLTR-YHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLS 294 (313)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~ 294 (313)
+....+.....+.+.. .....+..+.+|+.+||+.||.+|||+.++++.-.
T Consensus 237 ------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~ 288 (327)
T 3aln_A 237 ------DQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPF 288 (327)
T ss_dssp ---------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHH
T ss_pred ------HHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChH
Confidence 0000000001111111 12345567899999999999999999999987433
No 231
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=8.6e-42 Score=305.69 Aligned_cols=197 Identities=25% Similarity=0.307 Sum_probs=168.6
Q ss_pred HHhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc--cHHHHHHHHHHHhc--CC-----CceeeeeEEEeCCe
Q 041031 9 DATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK--SKEFSSELKILCKV--HS-----NLIELIGYAAGGDS 77 (313)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~--~~~~~~e~~~l~~l--h~-----~i~~~~~~~~~~~~ 77 (313)
...++|++.+.||+|+||.||+|.+. ++.||||++.... ......|+.+++.+ |+ +++++++++...+.
T Consensus 51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 130 (382)
T 2vx3_A 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH 130 (382)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence 34678999999999999999999987 7789999997653 34567788888888 55 49999999999999
Q ss_pred EEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhc--CCCCceEEeccCCCCeeeC--CCCcEEEe
Q 041031 78 LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQ--YTKPYYVHRDVKTSNILLD--SNFRAKIA 153 (313)
Q Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~--~~~~~i~h~di~p~nil~~--~~~~~~l~ 153 (313)
.++|||+++ ++|.+++... ....+++..++.++.|++.||.|||. .+ |+|+||||+||+++ .++.+||+
T Consensus 131 ~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~al~~lH~~~~~---ivHrDlkp~NIll~~~~~~~~kL~ 203 (382)
T 2vx3_A 131 LCLVFEMLS-YNLYDLLRNT---NFRGVSLNLTRKFAQQMCTALLFLATPELS---IIHCDLKPENILLCNPKRSAIKIV 203 (382)
T ss_dssp EEEEEECCC-CBHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHTSTTTC---EECCCCSGGGEEESSTTSCCEEEC
T ss_pred eEEEEecCC-CCHHHHHhhc---CcCCCCHHHHHHHHHHHHHHHHHhccCCCC---EEcCCCCcccEEEecCCCCcEEEE
Confidence 999999995 5999998532 22458999999999999999999994 67 99999999999995 47789999
Q ss_pred eccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCC
Q 041031 154 DFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDA 218 (313)
Q Consensus 154 dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~ 218 (313)
|||++...... .....+|+.|+|||++.+..++.++|||||||++|+|++|..||.+..
T Consensus 204 DFG~a~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 204 DFGSSCQLGQR------IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp CCTTCEETTCC------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred eccCceecccc------cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999865432 223468999999999999999999999999999999999999997654
No 232
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=5.9e-42 Score=300.05 Aligned_cols=264 Identities=22% Similarity=0.342 Sum_probs=199.0
Q ss_pred HHhcCccccceeccCCeEEEEEeEEC---CcceEEEeccccc-----cHHHHHHHHHHHhc----CCCceeeeeEEE---
Q 041031 9 DATSNFSTSLKIGQGSYGSVYLGKLR---GKNAAIKQMKNTK-----SKEFSSELKILCKV----HSNLIELIGYAA--- 73 (313)
Q Consensus 9 ~~~~~y~~~~~lg~g~~g~v~~~~~~---~~~~aiK~~~~~~-----~~~~~~e~~~l~~l----h~~i~~~~~~~~--- 73 (313)
...++|++.+.||+|+||.||+|.+. ++.||+|++.... ...+.+|+.+++.+ ||||+++++++.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 45689999999999999999999984 6789999986432 33566788777766 999999999987
Q ss_pred --eCCeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEE
Q 041031 74 --GGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAK 151 (313)
Q Consensus 74 --~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~ 151 (313)
.....++|||++. ++|.+++... ....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~k 160 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKV---PEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIK 160 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHS---CTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEE
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEE
Confidence 5567899999996 6999998522 2345899999999999999999999999 99999999999999999999
Q ss_pred EeeccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhH
Q 041031 152 IADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSL 231 (313)
Q Consensus 152 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~ 231 (313)
|+|||.+....... ......+++.|+|||++.+..++.++||||||+++|+|++|..||.+.... ..+
T Consensus 161 l~Dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~ 228 (326)
T 1blx_A 161 LADFGLARIYSFQM----ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV--------DQL 228 (326)
T ss_dssp ECSCCSCCCCCGGG----GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHH
T ss_pred EecCcccccccCCC----CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH--------HHH
Confidence 99999987654321 223356899999999999999999999999999999999999999765431 111
Q ss_pred HHHHHHHh-cCcHHHHHH---hhhhc----CCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 041031 232 VDYMLAVF-NDTKDFMAK---LTECL----DPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAI 291 (313)
Q Consensus 232 ~~~~~~~~-~~~~~~~~~---l~~~~----~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 291 (313)
........ +...++... ..... ...........+..+.+|+.+||+.||.+|||+.++++
T Consensus 229 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 229 GKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp HHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 11110000 000000000 00000 00011122345567889999999999999999999985
No 233
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=4e-42 Score=302.62 Aligned_cols=252 Identities=18% Similarity=0.248 Sum_probs=174.1
Q ss_pred HhcCccccc-eeccCCeEEEEEeEEC--CcceEEEeccccccHHHHHHHHH-HHhc-CCCceeeeeEEEe----CCeEEE
Q 041031 10 ATSNFSTSL-KIGQGSYGSVYLGKLR--GKNAAIKQMKNTKSKEFSSELKI-LCKV-HSNLIELIGYAAG----GDSLFL 80 (313)
Q Consensus 10 ~~~~y~~~~-~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~~~~~~~e~~~-l~~l-h~~i~~~~~~~~~----~~~~~l 80 (313)
..++|.+.+ .||+|+||.||+|.+. ++.||||++.... ...+|+.. ++.+ |||++++++++.. ....++
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 103 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP--KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLI 103 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH--HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH--HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEE
Confidence 567899965 6999999999999998 8899999986542 33344443 4444 9999999999876 455899
Q ss_pred EEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCC---CCcEEEeeccc
Q 041031 81 VYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDS---NFRAKIADFGL 157 (313)
Q Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~---~~~~~l~dfg~ 157 (313)
||||+.+++|.+++... ....+++..++.++.|++.||.|||+++ ++|+||||+||+++. ++.++|+|||+
T Consensus 104 v~e~~~gg~L~~~l~~~---~~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Dfg~ 177 (336)
T 3fhr_A 104 IMECMEGGELFSRIQER---GDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGF 177 (336)
T ss_dssp EEECCTTEEHHHHHHTC----CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEeccCCCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEecccc
Confidence 99999999999999532 2346999999999999999999999999 999999999999976 45599999999
Q ss_pred cccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHH
Q 041031 158 VKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLA 237 (313)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 237 (313)
+...... ......+++.|+|||++.+..++.++||||||+++|+|++|..||..........
T Consensus 178 ~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~------------- 239 (336)
T 3fhr_A 178 AKETTQN-----ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP------------- 239 (336)
T ss_dssp CEEC---------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------
T ss_pred ceecccc-----ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh-------------
Confidence 8765432 1223467999999999998889999999999999999999999997654321000
Q ss_pred HhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHH
Q 041031 238 VFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRL 293 (313)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l 293 (313)
.....+...............+..+.+|+.+||+.||.+|||+.++++.-
T Consensus 240 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 289 (336)
T 3fhr_A 240 ------GMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHP 289 (336)
T ss_dssp -----------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred ------hHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 00000000000000111234556788999999999999999999999743
No 234
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.7e-42 Score=307.72 Aligned_cols=258 Identities=23% Similarity=0.336 Sum_probs=195.8
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeE---
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAGGDSL--- 78 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~--- 78 (313)
+.++|.+.+.||+|+||.||+|.+. ++.||||++.... ...+.+|+.+++.+ ||||+++++++...+..
T Consensus 40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 3578999999999999999999987 8899999987542 34577899999999 99999999999877654
Q ss_pred ---EEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeec
Q 041031 79 ---FLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADF 155 (313)
Q Consensus 79 ---~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~df 155 (313)
++|||++. ++|.+.+. ..+++..++.++.|++.||+|||+++ ++|+||||+||+++.++.++|+||
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Df 188 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMG-------MEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDF 188 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTT-------SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECST
T ss_pred eeEEEEEcccc-ccHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEec
Confidence 99999996 68888872 34899999999999999999999999 999999999999999999999999
Q ss_pred cccccccCChhhhhhcccccccccccCCccccC-CCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHH
Q 041031 156 GLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRD-GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDY 234 (313)
Q Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~ 234 (313)
|++...... .....+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.... ..+...
T Consensus 189 g~a~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------~~~~~i 254 (371)
T 4exu_A 189 GLARHADAE------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL--------DQLTQI 254 (371)
T ss_dssp TCC--------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHH
T ss_pred CcccccccC------cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH--------HHHHHH
Confidence 998754432 223467999999999987 67899999999999999999999999764421 111111
Q ss_pred HHHHhcCcHHH---------HHHhhhhcCCCCCC---CCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 235 MLAVFNDTKDF---------MAKLTECLDPNLTR---YHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 235 ~~~~~~~~~~~---------~~~l~~~~~~~~~~---~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
.........++ .............. .....+..+.+|+.+||+.||.+|||+.|+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 255 LKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 11110110010 01111111111000 122345678999999999999999999999875
No 235
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=4.5e-42 Score=304.12 Aligned_cols=264 Identities=20% Similarity=0.290 Sum_probs=197.5
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEeC-----Ce
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAGG-----DS 77 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~-----~~ 77 (313)
+.++|.+.+.||+|+||.||+|.+. ++.||||.+.... ...+.+|+.+++.+ ||||+++++++... ..
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 4679999999999999999999987 8889999987543 33466899999999 99999999988654 67
Q ss_pred EEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccc
Q 041031 78 LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGL 157 (313)
Q Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~ 157 (313)
.+++||++. ++|.+++. ...+++..++.++.|++.||+|||+++ ++|+||||+||+++.++.++|+|||+
T Consensus 89 ~~lv~e~~~-~~L~~~~~------~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVIS------TQMLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGL 158 (353)
T ss_dssp EEEEECCCS-EEHHHHHH------HCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEeccC-ccHHHHHh------hcCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEeccc
Confidence 899999996 68999884 246899999999999999999999999 99999999999999999999999999
Q ss_pred cccccCChhhhh-------hcccccccccccCCccccC-CCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccch
Q 041031 158 VKLLEHSPEIAA-------AASRIVGTFGYLAPEYVRD-GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHR 229 (313)
Q Consensus 158 ~~~~~~~~~~~~-------~~~~~~~~~~~~aPE~~~~-~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~ 229 (313)
+........... ......+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+....
T Consensus 159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------- 229 (353)
T 2b9h_A 159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR--------- 229 (353)
T ss_dssp CEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH---------
T ss_pred ccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcH---------
Confidence 987653321111 1122467999999998764 67899999999999999999999999765421
Q ss_pred hHHHHHHHHhcC-----------cHHHHHHhhhhcC---CCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 230 SLVDYMLAVFND-----------TKDFMAKLTECLD---PNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 230 ~~~~~~~~~~~~-----------~~~~~~~l~~~~~---~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
.....+...... .......+..... ..+.......+..+.+|+.+||+.||.+|||+.++++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 230 HQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp HHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000000000 0000111111000 00000112345678899999999999999999999974
No 236
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=8.9e-42 Score=302.43 Aligned_cols=257 Identities=24% Similarity=0.357 Sum_probs=196.3
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCe-----
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAAGGDS----- 77 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~----- 77 (313)
.++|.+.+.||+|+||.||+|.+. ++.||||.+.... ...+.+|+.+++.+ ||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 578999999999999999999987 8899999986532 34567899999999 9999999999987654
Q ss_pred -EEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecc
Q 041031 78 -LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFG 156 (313)
Q Consensus 78 -~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg 156 (313)
.+++||++. ++|.+++. ..+++..++.++.|++.||.|||+++ ++|+||+|+||+++.++.++|+|||
T Consensus 103 ~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg 171 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMG-------LKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFG 171 (353)
T ss_dssp CCEEEEECCS-EEGGGTTT-------SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTT
T ss_pred eEEEEecccc-CCHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeecc
Confidence 499999996 68888772 34899999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCChhhhhhcccccccccccCCccccC-CCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHH
Q 041031 157 LVKLLEHSPEIAAAASRIVGTFGYLAPEYVRD-GCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYM 235 (313)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 235 (313)
++...... .....+++.|+|||++.+ ..++.++||||||+++|+|++|..||.+.... ..+....
T Consensus 172 ~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--------~~~~~i~ 237 (353)
T 3coi_A 172 LARHADAE------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL--------DQLTQIL 237 (353)
T ss_dssp CTTC--------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHH--------HHHHHHH
T ss_pred cccCCCCC------ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHH
Confidence 98764422 223467999999999987 67899999999999999999999999765421 1111111
Q ss_pred HHHhcCcHHHH------------HHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 236 LAVFNDTKDFM------------AKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 236 ~~~~~~~~~~~------------~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
........++. ..+...............+..+.+|+.+||+.||.+|||+.++++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 238 KVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 11000000100 0011111111222334556789999999999999999999999864
No 237
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.2e-41 Score=301.28 Aligned_cols=261 Identities=18% Similarity=0.282 Sum_probs=198.6
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--C-cceEEEeccccc--cHHHHHHHHHHHhc-CCC------ceeeeeEEEeCCe
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--G-KNAAIKQMKNTK--SKEFSSELKILCKV-HSN------LIELIGYAAGGDS 77 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~-~~~aiK~~~~~~--~~~~~~e~~~l~~l-h~~------i~~~~~~~~~~~~ 77 (313)
..++|++.+.||+|+||.||+|.+. + ..||+|+++... .+.+.+|+.+++.+ |++ ++.+++++...+.
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred ecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 3578999999999999999999986 3 679999997643 45577899999998 554 8999999999999
Q ss_pred EEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeee-------------
Q 041031 78 LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILL------------- 144 (313)
Q Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~------------- 144 (313)
.++|||++ +++|.+.+.. .....+++..++.++.|++.||+|||+++ ++|+||||+||++
T Consensus 97 ~~lv~e~~-~~~l~~~l~~---~~~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~ 169 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKE---NNFQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHK 169 (355)
T ss_dssp EEEEEECC-CCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-
T ss_pred EEEEEecc-CCChHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecccccccccccc
Confidence 99999999 5667666632 22356899999999999999999999999 9999999999999
Q ss_pred ------CCCCcEEEeeccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCC
Q 041031 145 ------DSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDA 218 (313)
Q Consensus 145 ------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~ 218 (313)
+.++.++|+|||++...... .....+|+.|+|||++.+..++.++|||||||++|+|++|..||....
T Consensus 170 ~~~~~~~~~~~~kl~Dfg~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 243 (355)
T 2eu9_A 170 SCEEKSVKNTSIRVADFGSATFDHEH------HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHE 243 (355)
T ss_dssp CCCEEEESCCCEEECCCTTCEETTSC------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccCCCcEEEeecCcccccccc------ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Confidence 56788999999998764432 223468999999999999999999999999999999999999997544
Q ss_pred CCCCCccccchhHHHHHHHHhcCcH-HHH-----------------------HHhhhhcCCC--CCCCCHHHHHHHHHHH
Q 041031 219 NPGNNQYTEHRSLVDYMLAVFNDTK-DFM-----------------------AKLTECLDPN--LTRYHKDSMLQMALLS 272 (313)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----------------------~~l~~~~~~~--~~~~~~~~~~~l~~li 272 (313)
.. .....+.......+ ... ..+.....+. ........+..+.+|+
T Consensus 244 ~~---------~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 314 (355)
T 2eu9_A 244 NR---------EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLM 314 (355)
T ss_dssp HH---------HHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHH
T ss_pred HH---------HHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHH
Confidence 31 11111111111100 000 0000000000 0012334466889999
Q ss_pred hhccccCcCCCCCHHHHHHH
Q 041031 273 KDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 273 ~~cl~~~p~~Rps~~~ll~~ 292 (313)
.+||+.||.+|||+.|+++.
T Consensus 315 ~~~L~~dP~~Rpt~~e~l~h 334 (355)
T 2eu9_A 315 RRMLEFDPAQRITLAEALLH 334 (355)
T ss_dssp HHHTCSSTTTSCCHHHHTTS
T ss_pred HHHhcCChhhCcCHHHHhcC
Confidence 99999999999999999853
No 238
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=8.6e-42 Score=310.44 Aligned_cols=258 Identities=21% Similarity=0.334 Sum_probs=189.3
Q ss_pred HHHHHhcC-ccccceeccCCeEEEEEe-EECCcceEEEeccccccHHHHHHHHHHHhc--CCCceeeeeEEEeCCeEEEE
Q 041031 6 EVRDATSN-FSTSLKIGQGSYGSVYLG-KLRGKNAAIKQMKNTKSKEFSSELKILCKV--HSNLIELIGYAAGGDSLFLV 81 (313)
Q Consensus 6 ~~~~~~~~-y~~~~~lg~g~~g~v~~~-~~~~~~~aiK~~~~~~~~~~~~e~~~l~~l--h~~i~~~~~~~~~~~~~~lv 81 (313)
.++....+ |.+.+.||+|+||+||.+ ...++.||||.+.....+.+.+|+.+++.+ ||||+++++++.+.+..++|
T Consensus 8 ~~~~~l~~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv 87 (434)
T 2rio_A 8 NFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIA 87 (434)
T ss_dssp CCSCSCSSCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEE
T ss_pred chhhhhhheeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEE
Confidence 33333444 445688999999999754 444899999999887777788999999876 99999999999999999999
Q ss_pred EeecCCCChhhhhcCCCCCCC--CCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCC------------
Q 041031 82 YEYAQNGALSDHLHWPSVKGK--KPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSN------------ 147 (313)
Q Consensus 82 ~e~~~~~~L~~~l~~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~------------ 147 (313)
||+++ |+|.+++........ ...++..++.++.|++.||+|||+++ ++|+||||+||+++.+
T Consensus 88 ~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~ 163 (434)
T 2rio_A 88 LELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAE 163 (434)
T ss_dssp ECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCC
T ss_pred EecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCC
Confidence 99995 699999964322111 11133346789999999999999999 9999999999999754
Q ss_pred -CcEEEeeccccccccCChhh-hhhcccccccccccCCccccC-------CCCCCccchhhHHHHHHHHHh-CCCCccCC
Q 041031 148 -FRAKIADFGLVKLLEHSPEI-AAAASRIVGTFGYLAPEYVRD-------GCVTTKSDVYAFGVVLMELIT-GQQALSRD 217 (313)
Q Consensus 148 -~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~aPE~~~~-------~~~~~~~DiwslG~~l~~~~t-g~~p~~~~ 217 (313)
+.++|+|||++......... ........+|+.|+|||++.+ ..++.++|||||||++|+|++ |..||...
T Consensus 164 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~ 243 (434)
T 2rio_A 164 NLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 243 (434)
T ss_dssp SCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCST
T ss_pred ceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCc
Confidence 47999999999876543221 112223468999999999975 568999999999999999999 99999643
Q ss_pred CCCCCCccccchhHHHHHHHHhcCcHHHHHHhhhhcC-CCCCC-CCHHHHHHHHHHHhhccccCcCCCCCHHHHHH
Q 041031 218 ANPGNNQYTEHRSLVDYMLAVFNDTKDFMAKLTECLD-PNLTR-YHKDSMLQMALLSKDCVDENWKRRPDMSNAAI 291 (313)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~-~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 291 (313)
... ....+..... +.... .....+..+.+|+.+||+.||.+|||+.++++
T Consensus 244 ~~~------------------------~~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 244 YSR------------------------ESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp TTH------------------------HHHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhh------------------------HHHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 321 0111111111 11111 34566788999999999999999999999985
No 239
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=3.7e-42 Score=311.60 Aligned_cols=263 Identities=25% Similarity=0.357 Sum_probs=194.1
Q ss_pred cCccccceeccCCeEEEEEeEEC--CcceEEEeccccccHHHHHHHHHHHhc-CCCceeeeeEEEeC------CeEEEEE
Q 041031 12 SNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIELIGYAAGG------DSLFLVY 82 (313)
Q Consensus 12 ~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~~~~~~~e~~~l~~l-h~~i~~~~~~~~~~------~~~~lv~ 82 (313)
.+|.+.+.||+|+||.||+|++. ++.||||.+.... ....+|+++++.+ ||||+++++++... ..+++||
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~ 132 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 132 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT-TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc-hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeeh
Confidence 36999999999999999999996 8899999986543 3345799999999 99999999998532 2367899
Q ss_pred eecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCC-CcEEEeeccccccc
Q 041031 83 EYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSN-FRAKIADFGLVKLL 161 (313)
Q Consensus 83 e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~-~~~~l~dfg~~~~~ 161 (313)
||+++ +|.+.+.... .....+++..++.++.|++.||+|||+++ |+|+||||+||+++.+ +.+||+|||++...
T Consensus 133 e~~~~-~l~~~~~~~~-~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~ 207 (420)
T 1j1b_A 133 DYVPE-TVYRVARHYS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207 (420)
T ss_dssp ECCCE-EHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred hcccc-cHHHHHHHHh-hccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhhhhc
Confidence 99965 6666553111 23467899999999999999999999999 9999999999999954 66899999999865
Q ss_pred cCChhhhhhcccccccccccCCccccCC-CCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhc
Q 041031 162 EHSPEIAAAASRIVGTFGYLAPEYVRDG-CVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240 (313)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (313)
.... ......+|+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.... ..+...+...-.
T Consensus 208 ~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~--------~~l~~i~~~lg~ 275 (420)
T 1j1b_A 208 VRGE----PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV--------DQLVEIIKVLGT 275 (420)
T ss_dssp CTTC----CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHHHCS
T ss_pred ccCC----CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHHHhCC
Confidence 4321 12234679999999999764 7899999999999999999999999765431 122222221111
Q ss_pred CcHHHHHHhhh-hcCCCCCC---------CCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 241 DTKDFMAKLTE-CLDPNLTR---------YHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 241 ~~~~~~~~l~~-~~~~~~~~---------~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
...+....... ..+..+.. .....+..+.+|+.+||..||.+|||+.|+++.
T Consensus 276 p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 276 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp CCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 11111111100 00111110 112335678999999999999999999999864
No 240
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2.1e-41 Score=301.96 Aligned_cols=267 Identities=18% Similarity=0.298 Sum_probs=196.7
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc--cHHHHHHHHHHHhc------------CCCceeeeeEEEe
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK--SKEFSSELKILCKV------------HSNLIELIGYAAG 74 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~--~~~~~~e~~~l~~l------------h~~i~~~~~~~~~ 74 (313)
.++|++.+.||+|+||.||+|.+. ++.||||++.... .+.+.+|+.+++.+ ||||+++++++..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 468999999999999999999986 8899999998653 44577888888876 5799999999876
Q ss_pred CC----eEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcC-CCCceEEeccCCCCeeeC----
Q 041031 75 GD----SLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQY-TKPYYVHRDVKTSNILLD---- 145 (313)
Q Consensus 75 ~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~-~~~~i~h~di~p~nil~~---- 145 (313)
.+ ..+++||++ +++|.+++... ....+++..++.++.|++.||+|||++ + ++|+||||+||+++
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~~ 170 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKY---EHRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDS 170 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEET
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHh---hccCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccCC
Confidence 54 789999999 88999998532 234589999999999999999999998 9 99999999999994
Q ss_pred --CCCcEEEeeccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCC
Q 041031 146 --SNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNN 223 (313)
Q Consensus 146 --~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~ 223 (313)
..+.++|+|||++...... .....+|+.|+|||++.+..++.++|||||||++|+|++|..||.........
T Consensus 171 ~~~~~~~kl~Dfg~a~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~ 244 (373)
T 1q8y_A 171 PENLIQIKIADLGNACWYDEH------YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYT 244 (373)
T ss_dssp TTTEEEEEECCCTTCEETTBC------CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred CcCcceEEEcccccccccCCC------CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccC
Confidence 3447999999998765432 22346899999999999999999999999999999999999999765432111
Q ss_pred ccccchhHHHHHHHHhcCcHHHHHHh---hhhcCC--------------------CCCCCCHHHHHHHHHHHhhccccCc
Q 041031 224 QYTEHRSLVDYMLAVFNDTKDFMAKL---TECLDP--------------------NLTRYHKDSMLQMALLSKDCVDENW 280 (313)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~--------------------~~~~~~~~~~~~l~~li~~cl~~~p 280 (313)
. ....+.................- ...... .........+..+.+|+.+||+.||
T Consensus 245 ~--~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 322 (373)
T 1q8y_A 245 K--DDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDP 322 (373)
T ss_dssp C--HHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSST
T ss_pred C--hHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCc
Confidence 0 11111111111111100000000 000000 0001345677889999999999999
Q ss_pred CCCCCHHHHHHH
Q 041031 281 KRRPDMSNAAIR 292 (313)
Q Consensus 281 ~~Rps~~~ll~~ 292 (313)
.+|||+.|+++.
T Consensus 323 ~~Rpt~~ell~h 334 (373)
T 1q8y_A 323 RKRADAGGLVNH 334 (373)
T ss_dssp TTCBCHHHHHTC
T ss_pred cccCCHHHHhhC
Confidence 999999999874
No 241
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=2e-42 Score=302.60 Aligned_cols=240 Identities=23% Similarity=0.357 Sum_probs=197.4
Q ss_pred HHHHhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc---------cHHHHHHHHHHHhc---CCCceeeeeEE
Q 041031 7 VRDATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK---------SKEFSSELKILCKV---HSNLIELIGYA 72 (313)
Q Consensus 7 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~---------~~~~~~e~~~l~~l---h~~i~~~~~~~ 72 (313)
.....++|++.+.||+|+||.||+|.+. ++.||||.+.... ...+.+|+.+++.+ |||++++++++
T Consensus 38 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~ 117 (320)
T 3a99_A 38 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 117 (320)
T ss_dssp --CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEE
T ss_pred cCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEE
Confidence 3456788999999999999999999886 7889999987543 23466899999999 59999999999
Q ss_pred EeCCeEEEEEeecCC-CChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeC-CCCcE
Q 041031 73 AGGDSLFLVYEYAQN-GALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLD-SNFRA 150 (313)
Q Consensus 73 ~~~~~~~lv~e~~~~-~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~-~~~~~ 150 (313)
...+..++++|++.+ ++|.+++. ....+++..++.++.|++.||+|||+.+ ++|+||||+||+++ +++.+
T Consensus 118 ~~~~~~~lv~e~~~~~~~L~~~l~-----~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~ 189 (320)
T 3a99_A 118 ERPDSFVLILERPEPVQDLFDFIT-----ERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL 189 (320)
T ss_dssp ECSSEEEEEEECCSSEEEHHHHHH-----HHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEE
T ss_pred ecCCcEEEEEEcCCCCccHHHHHh-----ccCCCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCE
Confidence 999999999999976 89999984 3456899999999999999999999999 99999999999999 78899
Q ss_pred EEeeccccccccCChhhhhhcccccccccccCCccccCCCC-CCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccch
Q 041031 151 KIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCV-TTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHR 229 (313)
Q Consensus 151 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~ 229 (313)
||+|||++...... ......+++.|+|||++.+..+ +.++||||||+++|+|++|..||.....
T Consensus 190 kL~Dfg~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~---------- 254 (320)
T 3a99_A 190 KLIDFGSGALLKDT-----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE---------- 254 (320)
T ss_dssp EECCCTTCEECCSS-----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH----------
T ss_pred EEeeCccccccccc-----cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh----------
Confidence 99999998876542 1223468999999999987665 6889999999999999999999953210
Q ss_pred hHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 230 SLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
..... .. .....+..+.+|+.+||+.||.+|||+.++++.
T Consensus 255 ------------------~~~~~--~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 255 ------------------IIRGQ--VF---FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp ------------------HHHCC--CC---CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ------------------hhccc--cc---ccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 00 112334578899999999999999999999873
No 242
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=3.2e-42 Score=309.55 Aligned_cols=264 Identities=23% Similarity=0.338 Sum_probs=194.0
Q ss_pred hcCccccceeccCCeEEEEEeEEC-CcceEEEeccccccHHHHHHHHHHHhc-CCCceeeeeEEEeCCe------EEEEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR-GKNAAIKQMKNTKSKEFSSELKILCKV-HSNLIELIGYAAGGDS------LFLVY 82 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~-~~~~aiK~~~~~~~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~------~~lv~ 82 (313)
..+|++.+.||+|+||.||+|++. +..+|+|.+.... ....+|+++++.+ ||||+++++++..... +++||
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~-~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~ 117 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK-RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVL 117 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT-TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc-chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEe
Confidence 357999999999999999999997 5568888876442 2234799999999 9999999999865433 78999
Q ss_pred eecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeC-CCCcEEEeeccccccc
Q 041031 83 EYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLD-SNFRAKIADFGLVKLL 161 (313)
Q Consensus 83 e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~-~~~~~~l~dfg~~~~~ 161 (313)
||++++ +.+.+.... .....+++..++.++.|++.||+|||+++ ++|+||||+||+++ .++.+||+|||++...
T Consensus 118 e~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~ 192 (394)
T 4e7w_A 118 EYVPET-VYRASRHYA-KLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192 (394)
T ss_dssp ECCSEE-HHHHHHHHH-HTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred eccCcc-HHHHHHHHH-hhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence 999764 433331100 23467899999999999999999999999 99999999999998 7999999999999865
Q ss_pred cCChhhhhhcccccccccccCCccccCC-CCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhc
Q 041031 162 EHSPEIAAAASRIVGTFGYLAPEYVRDG-CVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFN 240 (313)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (313)
.... ......+++.|+|||++.+. .++.++|||||||++|+|++|+.||.+.... ..+.......-.
T Consensus 193 ~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~--------~~l~~i~~~~g~ 260 (394)
T 4e7w_A 193 IAGE----PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI--------DQLVEIIKVLGT 260 (394)
T ss_dssp CTTC----CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHHHCC
T ss_pred cCCC----CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHHHhCC
Confidence 4322 12234679999999999764 5899999999999999999999999765431 112222221111
Q ss_pred CcHHHHHHh-hhhcCCCCCC---------CCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 241 DTKDFMAKL-TECLDPNLTR---------YHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 241 ~~~~~~~~l-~~~~~~~~~~---------~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
...+..... .......... .....+..+.+|+.+||..||.+|||+.|+++.
T Consensus 261 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 261 PSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp CCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred CCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 111111111 1111111111 122345678999999999999999999999864
No 243
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.3e-41 Score=296.78 Aligned_cols=248 Identities=24% Similarity=0.378 Sum_probs=179.2
Q ss_pred HhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccccH----H-HHHHHHHHHhc-CCCceeeeeEEEeCCeEEEE
Q 041031 10 ATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTKSK----E-FSSELKILCKV-HSNLIELIGYAAGGDSLFLV 81 (313)
Q Consensus 10 ~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~~~----~-~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv 81 (313)
..++|++.+.||+|+||.||+|.+. ++.||||.+...... . +.++..+++.+ ||||+++++++.+.+..++|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv 102 (318)
T 2dyl_A 23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA 102 (318)
T ss_dssp CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence 4578999999999999999999996 889999999765322 2 23334456666 99999999999999999999
Q ss_pred EeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcC-CCCceEEeccCCCCeeeCCCCcEEEeecccccc
Q 041031 82 YEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQY-TKPYYVHRDVKTSNILLDSNFRAKIADFGLVKL 160 (313)
Q Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~-~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~ 160 (313)
|||+ ++.+..+.. .....+++..++.++.|++.||.|||++ + ++|+||+|+||+++.++.++|+|||++..
T Consensus 103 ~e~~-~~~~~~l~~----~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~ 174 (318)
T 2dyl_A 103 MELM-GTCAEKLKK----RMQGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGR 174 (318)
T ss_dssp ECCC-SEEHHHHHH----HHTSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC--
T ss_pred Eecc-CCcHHHHHH----HhccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchh
Confidence 9999 556665553 2245789999999999999999999995 9 99999999999999999999999999876
Q ss_pred ccCChhhhhhcccccccccccCCcccc-----CCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHH
Q 041031 161 LEHSPEIAAAASRIVGTFGYLAPEYVR-----DGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYM 235 (313)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~aPE~~~-----~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 235 (313)
..... ......+++.|+|||++. +..++.++||||||+++|+|++|..||......
T Consensus 175 ~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------------- 235 (318)
T 2dyl_A 175 LVDDK----AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD--------------- 235 (318)
T ss_dssp ----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH---------------
T ss_pred ccCCc----cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc---------------
Confidence 54322 122346899999999994 456889999999999999999999999753321
Q ss_pred HHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 236 LAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
.+....+.....+... .....+..+.+++.+||+.||.+|||+.++++.
T Consensus 236 -------~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 236 -------FEVLTKVLQEEPPLLP-GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp -------HHHHHHHHHSCCCCCC-SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred -------HHHHHHHhccCCCCCC-ccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0111111111111111 122345678899999999999999999999863
No 244
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-41 Score=295.94 Aligned_cols=240 Identities=24% Similarity=0.393 Sum_probs=188.2
Q ss_pred HHHHhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc---------cHHHHHHHHHHHhc-----CCCceeeee
Q 041031 7 VRDATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK---------SKEFSSELKILCKV-----HSNLIELIG 70 (313)
Q Consensus 7 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~---------~~~~~~e~~~l~~l-----h~~i~~~~~ 70 (313)
.+...++|++.+.||+|+||.||+|.+. ++.||||++.... ...+.+|+.+++.+ ||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 3456788999999999999999999886 7889999997543 22345688888887 999999999
Q ss_pred EEEeCCeEEEEEee-cCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeC-CCC
Q 041031 71 YAAGGDSLFLVYEY-AQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLD-SNF 148 (313)
Q Consensus 71 ~~~~~~~~~lv~e~-~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~-~~~ 148 (313)
++...+..++|+|+ +.+++|.+++. ....+++..++.++.|++.||.|||+.+ ++|+||+|+||+++ .++
T Consensus 106 ~~~~~~~~~~v~e~~~~~~~L~~~l~-----~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~ 177 (312)
T 2iwi_A 106 WFETQEGFMLVLERPLPAQDLFDYIT-----EKGPLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRG 177 (312)
T ss_dssp EC-----CEEEEECCSSEEEHHHHHH-----HHCSCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTT
T ss_pred EEecCCeEEEEEEecCCCCCHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCC
Confidence 99999999999999 78899999984 3456899999999999999999999999 99999999999999 889
Q ss_pred cEEEeeccccccccCChhhhhhcccccccccccCCccccCCCC-CCccchhhHHHHHHHHHhCCCCccCCCCCCCCcccc
Q 041031 149 RAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCV-TTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTE 227 (313)
Q Consensus 149 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~ 227 (313)
.++|+|||++....... .....++..|+|||++.+..+ +.++||||||+++|+|++|..||.....
T Consensus 178 ~~kl~dfg~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------- 244 (312)
T 2iwi_A 178 CAKLIDFGSGALLHDEP-----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE-------- 244 (312)
T ss_dssp EEEECCCSSCEECCSSC-----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--------
T ss_pred eEEEEEcchhhhcccCc-----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH--------
Confidence 99999999988765432 223468999999999987665 4589999999999999999999953210
Q ss_pred chhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHH
Q 041031 228 HRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIR 292 (313)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~ 292 (313)
.... .. ......+..+.+++.+||+.||++|||+.++++.
T Consensus 245 --------------------~~~~--~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 245 --------------------ILEA--EL---HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp --------------------HHHT--CC---CCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred --------------------Hhhh--cc---CCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 00 1122345578899999999999999999999874
No 245
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.9e-40 Score=285.45 Aligned_cols=229 Identities=10% Similarity=0.068 Sum_probs=182.4
Q ss_pred hcCccccceeccCCeEEEEEeEEC--CcceEEEecccccc------HHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTKS------KEFSSELKILCKV-HSNLIELIGYAAGGDSLFLV 81 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~~------~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv 81 (313)
.++|++.+.||+|+||.||+|.+. ++.||||++..... ..+.+|+.++..+ ||||+++++++.+.+..++|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 367999999999999999999998 78999999986532 5578899999999 99999999999999999999
Q ss_pred EeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccc
Q 041031 82 YEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLL 161 (313)
Q Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~ 161 (313)
|||+++++|.+++. . . .....+..++.|++.||+|||+++ ++|+||||+||+++.+|.++|++++.
T Consensus 110 ~e~~~g~~L~~~l~-----~-~-~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~~---- 175 (286)
T 3uqc_A 110 AEWIRGGSLQEVAD-----T-S-PSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPAT---- 175 (286)
T ss_dssp EECCCEEEHHHHHT-----T-C-CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCCC----
T ss_pred EEecCCCCHHHHHh-----c-C-CChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEeccc----
Confidence 99999999999984 1 1 355568889999999999999999 99999999999999999999985432
Q ss_pred cCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcC
Q 041031 162 EHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFND 241 (313)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (313)
++ .++.++|||||||++|+|++|+.||.+.............
T Consensus 176 -------------------~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~------------ 217 (286)
T 3uqc_A 176 -------------------MP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERD------------ 217 (286)
T ss_dssp -------------------CT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBC------------
T ss_pred -------------------cC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHH------------
Confidence 22 2688999999999999999999999876543211000000
Q ss_pred cHHHHHHhhhhcCCCCC---CCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHHHHHHhccccc
Q 041031 242 TKDFMAKLTECLDPNLT---RYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRLSHILISSKEW 303 (313)
Q Consensus 242 ~~~~~~~l~~~~~~~~~---~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~~ 303 (313)
+..... ......+..+.+++.+||+.||.+| |+.++++.|.++.......
T Consensus 218 -----------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~~~ 270 (286)
T 3uqc_A 218 -----------TAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVADRT 270 (286)
T ss_dssp -----------TTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-----
T ss_pred -----------hccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCCcc
Confidence 000000 0112344578899999999999999 9999999999988765543
No 246
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=9.9e-40 Score=282.77 Aligned_cols=228 Identities=16% Similarity=0.291 Sum_probs=180.0
Q ss_pred HhcCcccc-ceeccCCeEEEEEeEEC--CcceEEEeccccccHHHHHHHHHHHhc--CCCceeeeeEEEe----CCeEEE
Q 041031 10 ATSNFSTS-LKIGQGSYGSVYLGKLR--GKNAAIKQMKNTKSKEFSSELKILCKV--HSNLIELIGYAAG----GDSLFL 80 (313)
Q Consensus 10 ~~~~y~~~-~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~~~~~~~e~~~l~~l--h~~i~~~~~~~~~----~~~~~l 80 (313)
..++|.+. +.||+|+||.||+|.+. ++.||+|.+.. .....+|+.++.++ ||||+++++++.. ....++
T Consensus 15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~--~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 92 (299)
T 3m2w_A 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 92 (299)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC--SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc--cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEE
Confidence 46788887 78999999999999986 78899999864 35677889888555 9999999999987 677999
Q ss_pred EEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCC---CCcEEEeeccc
Q 041031 81 VYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDS---NFRAKIADFGL 157 (313)
Q Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~---~~~~~l~dfg~ 157 (313)
||||+++++|.+++... ....+++..++.++.|++.||.|||+++ ++|+||||+||+++. ++.++|+|||+
T Consensus 93 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~ 166 (299)
T 3m2w_A 93 VMECLDGGELFSRIQDR---GDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGF 166 (299)
T ss_dssp EECCCCSCBHHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred EEeecCCCcHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEecccc
Confidence 99999999999998532 2346999999999999999999999999 999999999999997 78899999998
Q ss_pred cccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHH
Q 041031 158 VKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLA 237 (313)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 237 (313)
+.... +..++.++|||||||++|+|++|..||.........
T Consensus 167 a~~~~-------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~-------------- 207 (299)
T 3m2w_A 167 AKETT-------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-------------- 207 (299)
T ss_dssp CEECT-------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC---------------------
T ss_pred ccccc-------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh--------------
Confidence 86433 234678899999999999999999999755432100
Q ss_pred HhcCcHHHHHHhhhhcCCCCCCCC----HHHHHHHHHHHhhccccCcCCCCCHHHHHHHH
Q 041031 238 VFNDTKDFMAKLTECLDPNLTRYH----KDSMLQMALLSKDCVDENWKRRPDMSNAAIRL 293 (313)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l 293 (313)
............... ...+..+.+++.+||+.||.+|||+.|+++.-
T Consensus 208 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp 258 (299)
T 3m2w_A 208 ---------PGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 258 (299)
T ss_dssp ---------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred ---------HHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcCh
Confidence 000000000000011 23456789999999999999999999999743
No 247
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2e-40 Score=311.18 Aligned_cols=271 Identities=23% Similarity=0.317 Sum_probs=200.7
Q ss_pred HHHhcCccccceeccCCeEEEEEeEEC--CcceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEe------
Q 041031 8 RDATSNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAG------ 74 (313)
Q Consensus 8 ~~~~~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~------ 74 (313)
-...++|++.+.||+|+||.||+|.+. ++.||||++.... .+.+.+|+.+++.+ ||||+++++++..
T Consensus 10 g~~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~ 89 (676)
T 3qa8_A 10 TQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAP 89 (676)
T ss_dssp -------CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCT
T ss_pred CCCCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccC
Confidence 345689999999999999999999986 7899999987542 34577899999999 9999999998765
Q ss_pred CCeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCc---EE
Q 041031 75 GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFR---AK 151 (313)
Q Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~---~~ 151 (313)
.+..++||||+++++|.+++.... ....+++..++.++.|++.||+|||+.+ ++|+||+|+||+++.++. ++
T Consensus 90 ~~~~~LVmEy~~ggsL~~~L~~~~--~~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vK 164 (676)
T 3qa8_A 90 NDLPLLAMEYCEGGDLRKYLNQFE--NCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHK 164 (676)
T ss_dssp TSSCCCEEECCSSCBHHHHHHSSS--CTTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEE
T ss_pred CCeEEEEEEeCCCCCHHHHHHhcc--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEE
Confidence 677899999999999999996432 2346888999999999999999999999 999999999999997665 89
Q ss_pred EeeccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhH
Q 041031 152 IADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSL 231 (313)
Q Consensus 152 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~ 231 (313)
|+|||.+....... ......+++.|+|||++.+..++.++||||||+++|+|++|..||.+.....
T Consensus 165 L~DFG~a~~~~~~~----~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~---------- 230 (676)
T 3qa8_A 165 IIDLGYAKELDQGE----LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPV---------- 230 (676)
T ss_dssp ECSCCCCCBTTSCC----CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHH----------
T ss_pred Eccccccccccccc----ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchh----------
Confidence 99999998765432 2233568999999999999999999999999999999999999996542110
Q ss_pred HHHHHHHhcCcHHHHHHhh----hh-----cCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHH-----HHHHHHHHH
Q 041031 232 VDYMLAVFNDTKDFMAKLT----EC-----LDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSN-----AAIRLSHIL 297 (313)
Q Consensus 232 ~~~~~~~~~~~~~~~~~l~----~~-----~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~-----ll~~l~~~~ 297 (313)
.|........ ....... .. .-+.........+..+.+++.+||..||++|||+.+ +.+.+..+.
T Consensus 231 -~~~~~i~~~~-~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL 308 (676)
T 3qa8_A 231 -QWHGKVREKS-NEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSIL 308 (676)
T ss_dssp -HSSTTCC-------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHH
T ss_pred -hhhhhhhccc-chhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHH
Confidence 0000000000 0000000 00 001111245567888999999999999999999988 556676666
Q ss_pred hc
Q 041031 298 IS 299 (313)
Q Consensus 298 ~~ 299 (313)
..
T Consensus 309 ~~ 310 (676)
T 3qa8_A 309 SL 310 (676)
T ss_dssp CC
T ss_pred hc
Confidence 53
No 248
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.6e-39 Score=308.64 Aligned_cols=236 Identities=23% Similarity=0.361 Sum_probs=190.3
Q ss_pred hcCccccceeccCCeEEEEEeEEC---CcceEEEeccccc----cHHHHHHHHHHHhc-CCCceeeeeEEEeCCe-----
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR---GKNAAIKQMKNTK----SKEFSSELKILCKV-HSNLIELIGYAAGGDS----- 77 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~---~~~~aiK~~~~~~----~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~----- 77 (313)
.++|++.+.||+|+||.||+|.+. ++.||||.+.... ...+.+|+++++.+ ||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 478999999999999999999985 6889999986543 23467899999999 9999999999987655
Q ss_pred EEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccc
Q 041031 78 LFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGL 157 (313)
Q Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~ 157 (313)
.++||||+++++|.+++. ..+++..++.++.|++.+|.|||+++ |+|+||||+||+++.+ .+||+|||+
T Consensus 159 ~~lv~E~~~g~~L~~~~~-------~~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~ 227 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKG-------QKLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGA 227 (681)
T ss_dssp EEEEEECCCCEECC-----------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTT
T ss_pred eEEEEEeCCCCcHHHHHh-------CCCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEeccc
Confidence 799999999999998763 26899999999999999999999999 9999999999999886 899999999
Q ss_pred cccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCccCCCCCCCCccccchhHHHHHHH
Q 041031 158 VKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQALSRDANPGNNQYTEHRSLVDYMLA 237 (313)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 237 (313)
+...... ....+|+.|+|||++.+. ++.++|||||||++|+|++|..||.+....... .
T Consensus 228 a~~~~~~-------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~---~---------- 286 (681)
T 2pzi_A 228 VSRINSF-------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGLP---E---------- 286 (681)
T ss_dssp CEETTCC-------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSCC---T----------
T ss_pred chhcccC-------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccccccc---c----------
Confidence 8865432 234689999999999765 488999999999999999999988653221100 0
Q ss_pred HhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCC-CHHHHHHHHHHHHh
Q 041031 238 VFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRP-DMSNAAIRLSHILI 298 (313)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp-s~~~ll~~l~~~~~ 298 (313)
.......+..+.+++.+||+.||.+|| +++++.+.|..+..
T Consensus 287 --------------------~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 328 (681)
T 2pzi_A 287 --------------------DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLR 328 (681)
T ss_dssp --------------------TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHH
T ss_pred --------------------cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHH
Confidence 000111234678899999999999999 56667777776653
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=3.4e-39 Score=291.51 Aligned_cols=238 Identities=18% Similarity=0.148 Sum_probs=178.3
Q ss_pred cCccccceeccCCeEEEEEeEEC--CcceEEEeccccc------cHHHHHHHHHHHhc-C-CCc---------eeeeeE-
Q 041031 12 SNFSTSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNTK------SKEFSSELKILCKV-H-SNL---------IELIGY- 71 (313)
Q Consensus 12 ~~y~~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~~------~~~~~~e~~~l~~l-h-~~i---------~~~~~~- 71 (313)
.+|...+.||+|+||.||+|.+. ++.||||++.... .+.+.+|+.+++.+ | +|. +.....
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 35888899999999999999988 8999999987322 45678899888888 5 321 111111
Q ss_pred -----------EEe-----CCeEEEEEeecCCCChhhhhcCCC--CCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceE
Q 041031 72 -----------AAG-----GDSLFLVYEYAQNGALSDHLHWPS--VKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYV 133 (313)
Q Consensus 72 -----------~~~-----~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~ 133 (313)
+.. ...++++|+.. +++|.+++.... ......+++..++.++.|++.||+|||+++ |+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cc
Confidence 111 22467777776 679998883110 123456888899999999999999999999 99
Q ss_pred EeccCCCCeeeCCCCcEEEeeccccccccCChhhhhhcccccccccccCCccc----------cCCCCCCccchhhHHHH
Q 041031 134 HRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYV----------RDGCVTTKSDVYAFGVV 203 (313)
Q Consensus 134 h~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~----------~~~~~~~~~DiwslG~~ 203 (313)
|+||||+||+++.++.+||+|||++...... .....+ +.|+|||++ .+..++.++|||||||+
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvi 306 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLA 306 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc------cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHH
Confidence 9999999999999999999999998764432 223456 999999999 55568889999999999
Q ss_pred HHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcCcHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCC
Q 041031 204 LMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDFMAKLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRR 283 (313)
Q Consensus 204 l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~R 283 (313)
+|+|++|+.||........ ....... ....+..+.+|+.+||+.||.+|
T Consensus 307 l~elltg~~Pf~~~~~~~~--------------------------~~~~~~~-----~~~~~~~~~~li~~~l~~dP~~R 355 (413)
T 3dzo_A 307 IYWIWCADLPNTDDAALGG--------------------------SEWIFRS-----CKNIPQPVRALLEGFLRYPKEDR 355 (413)
T ss_dssp HHHHHHSSCCCCTTGGGSC--------------------------SGGGGSS-----CCCCCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHHCCCCCCCcchhhh--------------------------HHHHHhh-----cccCCHHHHHHHHHHccCChhhC
Confidence 9999999999975443210 0000110 11233578899999999999999
Q ss_pred CCHHHHHH
Q 041031 284 PDMSNAAI 291 (313)
Q Consensus 284 ps~~~ll~ 291 (313)
||+.++++
T Consensus 356 pt~~~~l~ 363 (413)
T 3dzo_A 356 LLPLQAME 363 (413)
T ss_dssp CCHHHHTT
T ss_pred cCHHHHHh
Confidence 99888754
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=7.5e-39 Score=281.74 Aligned_cols=235 Identities=18% Similarity=0.202 Sum_probs=182.5
Q ss_pred hcCccccceeccCCeEEEEEeEECCcceEEEecccccc-----------HHHHHHHHHHHhc----------CCCceeee
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKS-----------KEFSSELKILCKV----------HSNLIELI 69 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~aiK~~~~~~~-----------~~~~~e~~~l~~l----------h~~i~~~~ 69 (313)
.++|++.+.||+|+||.||+|+++++.||||++..... +.+.+|+.+++.+ |||++++.
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred cccchheeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 47899999999999999999999999999999975431 5678888888776 56666666
Q ss_pred eEE-----------------Ee-------------CCeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHH
Q 041031 70 GYA-----------------AG-------------GDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAK 119 (313)
Q Consensus 70 ~~~-----------------~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~ 119 (313)
+++ .+ .+.+++||||+++|++.+.+. ...+++..++.++.|++.
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~------~~~~~~~~~~~i~~qi~~ 172 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR------TKLSSLATAKSILHQLTA 172 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT------TTCCCHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH------hcCCCHHHHHHHHHHHHH
Confidence 654 22 678999999999997766662 155899999999999999
Q ss_pred HHHHHh-cCCCCceEEeccCCCCeeeCCCC--------------------cEEEeeccccccccCChhhhhhcccccccc
Q 041031 120 GLEYIH-QYTKPYYVHRDVKTSNILLDSNF--------------------RAKIADFGLVKLLEHSPEIAAAASRIVGTF 178 (313)
Q Consensus 120 ~l~~lh-~~~~~~i~h~di~p~nil~~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ 178 (313)
||+||| +++ |+|+||||+|||++.++ .+||+|||++...... ...+|+
T Consensus 173 aL~~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~--------~~~gt~ 241 (336)
T 2vuw_A 173 SLAVAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG--------IVVFCD 241 (336)
T ss_dssp HHHHHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT--------EEECCC
T ss_pred HHHHHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC--------cEEEee
Confidence 999999 999 99999999999999887 8999999999865532 236899
Q ss_pred cccCCccccCCCCCCccchhhHHHH-HHHHHhCCCCccCCCCCCCCccccchhHHHHHHHHhcCcHHHHHHhhhhcCCC-
Q 041031 179 GYLAPEYVRDGCVTTKSDVYAFGVV-LMELITGQQALSRDANPGNNQYTEHRSLVDYMLAVFNDTKDFMAKLTECLDPN- 256 (313)
Q Consensus 179 ~~~aPE~~~~~~~~~~~DiwslG~~-l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~- 256 (313)
.|+|||++.+.. +.++||||+|++ .+++++|..||... .|.. .....+.......
T Consensus 242 ~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~---------------~~~~-------~~~~~~~~~~~~~~ 298 (336)
T 2vuw_A 242 VSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV---------------LWLH-------YLTDKMLKQMTFKT 298 (336)
T ss_dssp CTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH---------------HHHH-------HHHHHHHHTCCCSS
T ss_pred cccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcch---------------hhhh-------HHHHhhhhhhccCc
Confidence 999999998776 889999998777 67788999998421 0000 0111111111111
Q ss_pred --CCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHH
Q 041031 257 --LTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAA 290 (313)
Q Consensus 257 --~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll 290 (313)
........+..+.+|+++||+.| |+.|++
T Consensus 299 ~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 299 KCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp CCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred ccchhhhhhcCHHHHHHHHHHhccC-----CHHHHH
Confidence 11124457788999999999976 899888
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=2.3e-31 Score=248.66 Aligned_cols=180 Identities=17% Similarity=0.154 Sum_probs=126.8
Q ss_pred eccCCeEEEEEeEEC--CcceEEEeccccc-------------cHHHHHHHHHHHhc--CCCceeeeeEEEeCCeEEEEE
Q 041031 20 IGQGSYGSVYLGKLR--GKNAAIKQMKNTK-------------SKEFSSELKILCKV--HSNLIELIGYAAGGDSLFLVY 82 (313)
Q Consensus 20 lg~g~~g~v~~~~~~--~~~~aiK~~~~~~-------------~~~~~~e~~~l~~l--h~~i~~~~~~~~~~~~~~lv~ 82 (313)
.+.|++|.+..++.. |+.+++|.+.... .+++.+|+++|+++ |+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 455666665555443 8899999986431 34588999999999 999999999999999999999
Q ss_pred eecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccccccc
Q 041031 83 EYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLE 162 (313)
Q Consensus 83 e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~ 162 (313)
||++|++|.+.+. ..++++.. +++.|++.||+|+|++| |+||||||+|||++++|.+||+|||++....
T Consensus 322 Eyv~G~~L~d~i~-----~~~~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~ 390 (569)
T 4azs_A 322 EKLPGRLLSDMLA-----AGEEIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTTP 390 (569)
T ss_dssp ECCCSEEHHHHHH-----TTCCCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred ecCCCCcHHHHHH-----hCCCCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence 9999999999994 44556654 47899999999999999 9999999999999999999999999988655
Q ss_pred CChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCCCc
Q 041031 163 HSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQAL 214 (313)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~p~ 214 (313)
.... ......||+.|+|||++.+. +...+|+||+|++++.+.++..|+
T Consensus 391 ~~~~---~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 391 QDCS---WPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp ---C---CSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred CCCc---cccCceechhhccHHHhCCC-CCCcccccccccchhhhccccchh
Confidence 4322 22335799999999999764 677899999999988877665443
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.94 E-value=1.2e-27 Score=222.40 Aligned_cols=182 Identities=18% Similarity=0.181 Sum_probs=144.4
Q ss_pred cccceeccCCeEEEEEeEECCcceEEEeccccc-----------cHHHHHHHHHHHhc-CCCceeeeeEEEeCCeEEEEE
Q 041031 15 STSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTK-----------SKEFSSELKILCKV-HSNLIELIGYAAGGDSLFLVY 82 (313)
Q Consensus 15 ~~~~~lg~g~~g~v~~~~~~~~~~aiK~~~~~~-----------~~~~~~e~~~l~~l-h~~i~~~~~~~~~~~~~~lv~ 82 (313)
...++||+|+||.||+|...++.+++|...... .+.+.+|+++++++ ||||+++..++.+.+..++||
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp ---------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred CCCCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence 446799999999999998889999999864322 22368999999999 999996666666777889999
Q ss_pred eecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeecccccccc
Q 041031 83 EYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLE 162 (313)
Q Consensus 83 e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~ 162 (313)
||+++++|.+++.. +..++.|++.+|.|||+++ |+|+||||+||+++. .+||+|||++....
T Consensus 419 E~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~~ 480 (540)
T 3en9_A 419 SYINGKLAKDVIED-------------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKISN 480 (540)
T ss_dssp ECCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred ECCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEECC
Confidence 99999999999842 4578999999999999999 999999999999999 99999999999876
Q ss_pred CChhhhh----hcccccccccccCCccccC--CCCCCccchhhHHHHHHHHHhCCCCc
Q 041031 163 HSPEIAA----AASRIVGTFGYLAPEYVRD--GCVTTKSDVYAFGVVLMELITGQQAL 214 (313)
Q Consensus 163 ~~~~~~~----~~~~~~~~~~~~aPE~~~~--~~~~~~~DiwslG~~l~~~~tg~~p~ 214 (313)
....... ......+|+.|+|||++.. ..|+..+|+|+..+-..+-..++.+|
T Consensus 481 ~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 481 LDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred CccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 5322111 1234578999999999986 66888899999999888888777665
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.90 E-value=3.4e-24 Score=183.35 Aligned_cols=136 Identities=14% Similarity=0.080 Sum_probs=110.9
Q ss_pred HHHHHhcCccccceeccCCeEEEEEeEEC-CcceEEEeccccc---------------------cHHHHHHHHHHHhcCC
Q 041031 6 EVRDATSNFSTSLKIGQGSYGSVYLGKLR-GKNAAIKQMKNTK---------------------SKEFSSELKILCKVHS 63 (313)
Q Consensus 6 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~-~~~~aiK~~~~~~---------------------~~~~~~e~~~l~~lh~ 63 (313)
.+......|.+.+.||+|+||.||+|.+. ++.||||.++... ...+.+|+.+++.++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~- 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ- 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence 34444556667799999999999999996 7899999986432 234779999999996
Q ss_pred CceeeeeEEEeCCeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCee
Q 041031 64 NLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNIL 143 (313)
Q Consensus 64 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil 143 (313)
| +++.+.+.. +..++||||+++++|.+ +. . .....++.|++.||.|||+.+ ++|+||||+||+
T Consensus 163 ~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~-----~------~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NIL 225 (282)
T 1zar_A 163 G-LAVPKVYAW-EGNAVLMELIDAKELYR-VR-----V------ENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVL 225 (282)
T ss_dssp T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CC-----C------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEE
T ss_pred C-CCcCeEEec-cceEEEEEecCCCcHHH-cc-----h------hhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHEE
Confidence 5 667665544 45699999999999998 52 1 123468999999999999999 999999999999
Q ss_pred eCCCCcEEEeecccccc
Q 041031 144 LDSNFRAKIADFGLVKL 160 (313)
Q Consensus 144 ~~~~~~~~l~dfg~~~~ 160 (313)
++ ++.++|+|||++..
T Consensus 226 l~-~~~vkl~DFG~a~~ 241 (282)
T 1zar_A 226 VS-EEGIWIIDFPQSVE 241 (282)
T ss_dssp EE-TTEEEECCCTTCEE
T ss_pred EE-CCcEEEEECCCCeE
Confidence 99 99999999999863
No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.82 E-value=4.1e-20 Score=156.07 Aligned_cols=132 Identities=19% Similarity=0.185 Sum_probs=103.7
Q ss_pred ccccceeccCCeEEEEEeEE--CCcc--eEEEecccccc---------------------------HHHHHHHHHHHhc-
Q 041031 14 FSTSLKIGQGSYGSVYLGKL--RGKN--AAIKQMKNTKS---------------------------KEFSSELKILCKV- 61 (313)
Q Consensus 14 y~~~~~lg~g~~g~v~~~~~--~~~~--~aiK~~~~~~~---------------------------~~~~~e~~~l~~l- 61 (313)
|.+.+.||+|+||.||+|.+ .|+. ||||+++.... ..+.+|+.+++.+
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 67889999999999999998 4888 99998654311 2467899999999
Q ss_pred CCCc--eeeeeEEEeCCeEEEEEeecCC-C----ChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHh-cCCCCceE
Q 041031 62 HSNL--IELIGYAAGGDSLFLVYEYAQN-G----ALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIH-QYTKPYYV 133 (313)
Q Consensus 62 h~~i--~~~~~~~~~~~~~~lv~e~~~~-~----~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh-~~~~~~i~ 133 (313)
|+++ ..++.. +..++||||+.+ | +|.+... ..++..+..++.|++.++.+|| +.+ ++
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~--------~~~~~~~~~i~~qi~~~l~~lH~~~g---iv 193 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGR--------ELKELDVEGIFNDVVENVKRLYQEAE---LV 193 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGG--------GGGGSCHHHHHHHHHHHHHHHHHTSC---EE
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhh--------ccChHHHHHHHHHHHHHHHHHHHHCC---EE
Confidence 7754 344432 356899999942 3 5665542 1234567789999999999999 999 99
Q ss_pred EeccCCCCeeeCCCCcEEEeecccccccc
Q 041031 134 HRDVKTSNILLDSNFRAKIADFGLVKLLE 162 (313)
Q Consensus 134 h~di~p~nil~~~~~~~~l~dfg~~~~~~ 162 (313)
|+||||+||++++ .++|+|||++....
T Consensus 194 HrDlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 194 HADLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp CSSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred eCCCCHHHEEEcC--cEEEEECcccccCC
Confidence 9999999999998 89999999987543
No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.73 E-value=7e-18 Score=148.46 Aligned_cols=135 Identities=13% Similarity=0.149 Sum_probs=99.0
Q ss_pred cCccccceeccCCeEEEEEeEEC-CcceEEEecccccc-----------------HH--------HHHHHHHHHhc-CCC
Q 041031 12 SNFSTSLKIGQGSYGSVYLGKLR-GKNAAIKQMKNTKS-----------------KE--------FSSELKILCKV-HSN 64 (313)
Q Consensus 12 ~~y~~~~~lg~g~~g~v~~~~~~-~~~~aiK~~~~~~~-----------------~~--------~~~e~~~l~~l-h~~ 64 (313)
.-|.+.+.||.|++|.||+|.+. |+.||||+++.... .. ..+|...|.++ +.+
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34999999999999999999987 88999998753210 00 23466667777 333
Q ss_pred ceeeeeEEEeCCeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeee
Q 041031 65 LIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILL 144 (313)
Q Consensus 65 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~ 144 (313)
+ .+...+... ..++||||++|++|.++.. . .....++.|++.++.+||+.| ++|+||||.|||+
T Consensus 175 v-~vp~p~~~~-~~~LVME~i~G~~L~~l~~---------~--~~~~~l~~qll~~l~~lH~~g---IVHrDLKp~NILl 238 (397)
T 4gyi_A 175 F-PVPEPIAQS-RHTIVMSLVDALPMRQVSS---------V--PDPASLYADLIALILRLAKHG---LIHGDFNEFNILI 238 (397)
T ss_dssp C-SCCCEEEEE-TTEEEEECCSCEEGGGCCC---------C--SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEE
T ss_pred C-CCCeeeecc-CceEEEEecCCccHhhhcc---------c--HHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEE
Confidence 2 222222112 2379999999988877642 1 123567899999999999999 9999999999999
Q ss_pred CCCC----------cEEEeecccccccc
Q 041031 145 DSNF----------RAKIADFGLVKLLE 162 (313)
Q Consensus 145 ~~~~----------~~~l~dfg~~~~~~ 162 (313)
+++| .+.++||+-+....
T Consensus 239 ~~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 239 REEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp EEEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred eCCCCcccccccccceEEEEeCCcccCC
Confidence 8776 38999999876543
No 256
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.56 E-value=2.3e-14 Score=120.92 Aligned_cols=145 Identities=14% Similarity=0.113 Sum_probs=117.6
Q ss_pred HHHHHhcCccccceeccCCeEEEEEeEECCcceEEEeccc---cccHHHHHHHHHHHhc--CCCceeeeeEEEeCCeEEE
Q 041031 6 EVRDATSNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKN---TKSKEFSSELKILCKV--HSNLIELIGYAAGGDSLFL 80 (313)
Q Consensus 6 ~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~aiK~~~~---~~~~~~~~e~~~l~~l--h~~i~~~~~~~~~~~~~~l 80 (313)
.+....++|.+...++.|+.+.||++...++.+++|.... .....+.+|..+++.+ +..+.+++++..+....++
T Consensus 8 ~l~~~l~~~~~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l 87 (263)
T 3tm0_A 8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL 87 (263)
T ss_dssp HHHHHHTTSEEEECCSCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred HHHHHhccceeEeeccCCCCCeEEEEECCCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence 4567778999999999999999999988888999999875 4456789999999999 5667899999999899999
Q ss_pred EEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCC--------------------------------
Q 041031 81 VYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT-------------------------------- 128 (313)
Q Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~-------------------------------- 128 (313)
|||+++|.+|.+.+. +......++.+++.+++.||+..
T Consensus 88 v~e~i~G~~l~~~~~----------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (263)
T 3tm0_A 88 LMSEADGVLCSEEYE----------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCEN 157 (263)
T ss_dssp EEECCSSEEHHHHCC----------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGG
T ss_pred EEEecCCeehhhccC----------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccc
Confidence 999999999987641 11122467889999999999811
Q ss_pred ------------------------CCceEEeccCCCCeeeCCCCcEEEeecccccc
Q 041031 129 ------------------------KPYYVHRDVKTSNILLDSNFRAKIADFGLVKL 160 (313)
Q Consensus 129 ------------------------~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~ 160 (313)
...++|+|++|.||++++++.+.++||+.+..
T Consensus 158 ~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 158 WEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp GSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred ccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 12389999999999998765567999997653
No 257
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.32 E-value=8e-12 Score=104.92 Aligned_cols=141 Identities=13% Similarity=0.078 Sum_probs=104.8
Q ss_pred HHHHhcCccccceeccCCeEEEEEeEEC-CcceEEEeccccccHHHHHHHHHHHhc-CCC--ceeeeeEEEeCCeEEEEE
Q 041031 7 VRDATSNFSTSLKIGQGSYGSVYLGKLR-GKNAAIKQMKNTKSKEFSSELKILCKV-HSN--LIELIGYAAGGDSLFLVY 82 (313)
Q Consensus 7 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~-~~~~aiK~~~~~~~~~~~~e~~~l~~l-h~~--i~~~~~~~~~~~~~~lv~ 82 (313)
+.....++.+..+.+.|..+.||++... |+.+++|.........+..|+.+++.+ +.+ +.+++++....+..++||
T Consensus 15 l~~~~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~ 94 (264)
T 1nd4_A 15 WVERLFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLL 94 (264)
T ss_dssp GTTTTTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCTTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEE
T ss_pred HHHhcCCCceEecccCCCCceEEEEecCCCCeEEEEeCCcccchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEE
Confidence 3444566776555556667999999766 678999998776556788999999999 333 567888888878899999
Q ss_pred eecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCC----------------------------------
Q 041031 83 EYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT---------------------------------- 128 (313)
Q Consensus 83 e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~---------------------------------- 128 (313)
|+++|.+|. .. . .. ...++.+++..++.||+..
T Consensus 95 e~i~G~~l~--~~----~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (264)
T 1nd4_A 95 GEVPGQDLL--SS----H----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEE 161 (264)
T ss_dssp ECCSSEETT--TS----C----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGG
T ss_pred EecCCcccC--cC----c----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhh
Confidence 999998884 31 1 11 1246677778888888753
Q ss_pred ---------------------CCceEEeccCCCCeeeCCCCcEEEeecccccc
Q 041031 129 ---------------------KPYYVHRDVKTSNILLDSNFRAKIADFGLVKL 160 (313)
Q Consensus 129 ---------------------~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~ 160 (313)
+..++|+|++|.||++++++.+.++||+.+..
T Consensus 162 ~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 162 HQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp GTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred ccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11289999999999998776567999998753
No 258
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.27 E-value=3e-11 Score=106.52 Aligned_cols=142 Identities=13% Similarity=0.190 Sum_probs=109.3
Q ss_pred ccccceeccCCeEEEEEeEECCcceEEEecc--ccc----cHHHHHHHHHHHhc---CCCceeeeeEEEeC---CeEEEE
Q 041031 14 FSTSLKIGQGSYGSVYLGKLRGKNAAIKQMK--NTK----SKEFSSELKILCKV---HSNLIELIGYAAGG---DSLFLV 81 (313)
Q Consensus 14 y~~~~~lg~g~~g~v~~~~~~~~~~aiK~~~--~~~----~~~~~~e~~~l~~l---h~~i~~~~~~~~~~---~~~~lv 81 (313)
...++.++.|.++.||+....+..+++|... ... ...+.+|..+++.+ +..+.+++.++.+. ...++|
T Consensus 40 ~~~~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v 119 (359)
T 3dxp_A 40 PLSVEQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI 119 (359)
T ss_dssp CCEEEECCC-CCSCEEEEECSSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred CceEEEcCCcccceEEEEEECCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence 3457789999999999998888889999887 432 45688999999999 34578888888766 348999
Q ss_pred EeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCC---------------------------------
Q 041031 82 YEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT--------------------------------- 128 (313)
Q Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~--------------------------------- 128 (313)
||+++|.++.+.. ...++......++.+++.+|+.||+..
T Consensus 120 me~v~G~~l~~~~-------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (359)
T 3dxp_A 120 MEFVSGRVLWDQS-------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETE 192 (359)
T ss_dssp EECCCCBCCCCTT-------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCS
T ss_pred EEecCCeecCCCc-------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCc
Confidence 9999998775422 134677788889999999999999731
Q ss_pred ----------------------CCceEEeccCCCCeeeCCCCc--EEEeecccccccc
Q 041031 129 ----------------------KPYYVHRDVKTSNILLDSNFR--AKIADFGLVKLLE 162 (313)
Q Consensus 129 ----------------------~~~i~h~di~p~nil~~~~~~--~~l~dfg~~~~~~ 162 (313)
...++|+|++|.||+++.++. +.++||+.+....
T Consensus 193 ~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g~ 250 (359)
T 3dxp_A 193 SIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLGH 250 (359)
T ss_dssp CCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEEC
T ss_pred CChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccCC
Confidence 134999999999999997653 5899999887543
No 259
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=99.18 E-value=3.5e-11 Score=103.60 Aligned_cols=185 Identities=19% Similarity=0.225 Sum_probs=122.0
Q ss_pred cceeccCCeEEEEEeEECCcceEEEecccc-ccHHHHHHHHHHHhc--CCC--ceeeeeEEEeCC---eEEEEEeecCCC
Q 041031 17 SLKIGQGSYGSVYLGKLRGKNAAIKQMKNT-KSKEFSSELKILCKV--HSN--LIELIGYAAGGD---SLFLVYEYAQNG 88 (313)
Q Consensus 17 ~~~lg~g~~g~v~~~~~~~~~~aiK~~~~~-~~~~~~~e~~~l~~l--h~~--i~~~~~~~~~~~---~~~lv~e~~~~~ 88 (313)
++.++.|..+.||+.. ..+++|..... ....+.+|..+++.+ +.. +.+++....... ..|+||++++|.
T Consensus 25 i~~~~~G~~n~v~~v~---~~~vlR~~~~~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~ 101 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN---RDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGV 101 (304)
T ss_dssp CCEEEECSSEEEEEST---TSEEEEEESSHHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCE
T ss_pred eEecCCCCcceEEEEC---CEEEEEecCCcchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCe
Confidence 5678999999999874 67999987654 345688999999888 322 345554443333 347899999998
Q ss_pred ChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCC----------------------------------------
Q 041031 89 ALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT---------------------------------------- 128 (313)
Q Consensus 89 ~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~---------------------------------------- 128 (313)
+|.+... ..++......++.+++..++.||+..
T Consensus 102 ~l~~~~~-------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 102 PLTPLLL-------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp ECCHHHH-------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred ECCcccc-------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 8875331 23566677778888888888888621
Q ss_pred ---------------CCceEEeccCCCCeeeCC--CCcEEEeeccccccccCChhhhhhcccccccccccCCcccc----
Q 041031 129 ---------------KPYYVHRDVKTSNILLDS--NFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVR---- 187 (313)
Q Consensus 129 ---------------~~~i~h~di~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~---- 187 (313)
...++|+|++|.||++++ ++.+.++||+.+.......+....... . .-..|+...
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~---~-~~~~~~~~~~~l~ 250 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMED---D-EEYGMEFVSKILN 250 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCT---T-TSCCHHHHHHHHH
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhh---c-cccCHHHHHHHHH
Confidence 123799999999999998 455789999987754332221111000 0 001222111
Q ss_pred C-CC---------CCCccchhhHHHHHHHHHhCCCCcc
Q 041031 188 D-GC---------VTTKSDVYAFGVVLMELITGQQALS 215 (313)
Q Consensus 188 ~-~~---------~~~~~DiwslG~~l~~~~tg~~p~~ 215 (313)
. +. .....+.|++|.++|.+.+|..+|.
T Consensus 251 ~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 251 HYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 0 00 1223588999999999999988763
No 260
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.94 E-value=8.8e-09 Score=89.21 Aligned_cols=136 Identities=17% Similarity=0.238 Sum_probs=101.8
Q ss_pred CccccceeccCCeEEEEEeEECCcceEEEeccccc-cHHHHHHHHHHHhc-C--C--CceeeeeEEEeCCeEEEEEeecC
Q 041031 13 NFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTK-SKEFSSELKILCKV-H--S--NLIELIGYAAGGDSLFLVYEYAQ 86 (313)
Q Consensus 13 ~y~~~~~lg~g~~g~v~~~~~~~~~~aiK~~~~~~-~~~~~~e~~~l~~l-h--~--~i~~~~~~~~~~~~~~lv~e~~~ 86 (313)
....++.++.|..+.||+. ++.+++|...... ...+.+|..+++.+ + . .+.++++. ...+++|||++
T Consensus 38 ~i~~v~~l~~G~~n~vy~v---g~~~vlR~~~~~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~ 110 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC---NEQYVVKVPKRDSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIK 110 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE---TTTEEEEEESSHHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCC
T ss_pred ceEEEEeCCCCCCceEEEE---CCEEEEEeCCcHHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecC
Confidence 6667889999999999988 7889999876654 45688999999888 4 1 23455544 45689999999
Q ss_pred CCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCC-------------------------------------
Q 041031 87 NGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTK------------------------------------- 129 (313)
Q Consensus 87 ~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~------------------------------------- 129 (313)
|.++..... ..++......++.+++..++.||+...
T Consensus 111 G~~l~~~~~-------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (320)
T 3r70_A 111 GERITYEQY-------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTD 183 (320)
T ss_dssp CBCCCHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCH
T ss_pred Ccccccccc-------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccc
Confidence 988874321 235566667777788888887775432
Q ss_pred -----------------------CceEEeccCCCCeeeCCCCcEEEeecccccccc
Q 041031 130 -----------------------PYYVHRDVKTSNILLDSNFRAKIADFGLVKLLE 162 (313)
Q Consensus 130 -----------------------~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~ 162 (313)
..++|+|++|.||+++.++.+.++||+.+....
T Consensus 184 ~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~ 239 (320)
T 3r70_A 184 EMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD 239 (320)
T ss_dssp HHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred cchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence 125999999999999986667999999886543
No 261
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.89 E-value=1.7e-08 Score=85.08 Aligned_cols=140 Identities=16% Similarity=0.131 Sum_probs=102.3
Q ss_pred hcCccccceeccCCeE-EEEEeEEC--CcceEEEeccccccHHHHHHHHHHHhcCC--CceeeeeEEEeCCeEEEEEeec
Q 041031 11 TSNFSTSLKIGQGSYG-SVYLGKLR--GKNAAIKQMKNTKSKEFSSELKILCKVHS--NLIELIGYAAGGDSLFLVYEYA 85 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g-~v~~~~~~--~~~~aiK~~~~~~~~~~~~e~~~l~~lh~--~i~~~~~~~~~~~~~~lv~e~~ 85 (313)
...|+.. .+..|..+ .||+.... +..+++|.-.......+.+|..+|+.+.+ -+.+++.++.+.+..++||+++
T Consensus 24 l~g~~~~-~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l 102 (272)
T 4gkh_A 24 LYGYRWA-RDNVGQSGATIYRLYGKPNAPELFLKHGKGSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAI 102 (272)
T ss_dssp HTTCEEE-EEECSSSSCEEEEEECCTTCCCEEEEEEETHHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECC
T ss_pred ccCCeEE-EccCCCcCCeEEEEEecCCCeEEEEEECCCCCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEee
Confidence 3444433 33345444 68987665 56799999887777788999999999933 3678889999999999999999
Q ss_pred CCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCC------------------------------------
Q 041031 86 QNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTK------------------------------------ 129 (313)
Q Consensus 86 ~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~------------------------------------ 129 (313)
+|.++.+.... .......+..++...++.||+...
T Consensus 103 ~G~~~~~~~~~---------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (272)
T 4gkh_A 103 PGKTAFQVLEE---------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNG 173 (272)
T ss_dssp CSEEHHHHHHH---------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTT
T ss_pred CCccccccccC---------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccc
Confidence 99888776521 112233466677777777776420
Q ss_pred -------------------CceEEeccCCCCeeeCCCCcEEEeecccccc
Q 041031 130 -------------------PYYVHRDVKTSNILLDSNFRAKIADFGLVKL 160 (313)
Q Consensus 130 -------------------~~i~h~di~p~nil~~~~~~~~l~dfg~~~~ 160 (313)
..++|+|+.+.||++++++.+-|+||+.+..
T Consensus 174 ~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 174 WPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp CCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred hHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 0178999999999999877677999998764
No 262
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.66 E-value=2e-07 Score=82.09 Aligned_cols=78 Identities=10% Similarity=0.169 Sum_probs=60.8
Q ss_pred cCccccceeccCCeEEEEEeEECCcceEEEeccccccHHHHHHHHHHHhc-CCC--ceeeeeEEEeC-CeEEEEEeecCC
Q 041031 12 SNFSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV-HSN--LIELIGYAAGG-DSLFLVYEYAQN 87 (313)
Q Consensus 12 ~~y~~~~~lg~g~~g~v~~~~~~~~~~aiK~~~~~~~~~~~~e~~~l~~l-h~~--i~~~~~~~~~~-~~~~lv~e~~~~ 87 (313)
.+...++.++.|....+|+....++.+++|..... ..+..|..+++.+ ... +.+++.+..+. ...+++||+++|
T Consensus 41 ~~~~~i~~l~gG~~n~~y~v~~~g~~~vlK~~~~~--~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G 118 (362)
T 3ovc_A 41 DSVSDLMQLSEGEESRAFSFDVGGRGYVLRVNSCA--DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQG 118 (362)
T ss_dssp SCCEEEEEEEECSSEEEEEEEETTEEEEEEEESCC--HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCS
T ss_pred CCCceEEECCCCCcceEEEEEECCcEEEEEeCCch--hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCC
Confidence 34556778999999999999888889999988654 3688999999999 222 56777776654 568999999998
Q ss_pred CChh
Q 041031 88 GALS 91 (313)
Q Consensus 88 ~~L~ 91 (313)
.++.
T Consensus 119 ~~l~ 122 (362)
T 3ovc_A 119 VTLQ 122 (362)
T ss_dssp EETT
T ss_pred CCcc
Confidence 7664
No 263
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.64 E-value=3.5e-07 Score=78.54 Aligned_cols=134 Identities=18% Similarity=0.251 Sum_probs=93.0
Q ss_pred cceeccCCeEEEEEeEECCcceEEEecccc-ccHHHHHHHHHHHhc-C--C-CceeeeeEEE-eCCeEEEEEeecCCCCh
Q 041031 17 SLKIGQGSYGSVYLGKLRGKNAAIKQMKNT-KSKEFSSELKILCKV-H--S-NLIELIGYAA-GGDSLFLVYEYAQNGAL 90 (313)
Q Consensus 17 ~~~lg~g~~g~v~~~~~~~~~~aiK~~~~~-~~~~~~~e~~~l~~l-h--~-~i~~~~~~~~-~~~~~~lv~e~~~~~~L 90 (313)
++.++.|....||+. +..+++|+.... ....+.+|..+|+.+ + + .+.+++.+.. .....+++|++++|.++
T Consensus 24 v~~l~~G~~n~v~~v---g~~~VlR~~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l 100 (306)
T 3tdw_A 24 VESLGEGFRNYAILV---NGDWVFRFPKSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQIL 100 (306)
T ss_dssp EEEEEECSSEEEEEE---TTTEEEEEESSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEEC
T ss_pred eeecCCCcceeEEEE---CCEEEEEecCCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeEC
Confidence 567888999999988 788999986433 245688999999999 2 1 2556666664 34557899999999888
Q ss_pred hhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCC------------------------------------------
Q 041031 91 SDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYT------------------------------------------ 128 (313)
Q Consensus 91 ~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~------------------------------------------ 128 (313)
.+..- ..++......++.++...|+.||+..
T Consensus 101 ~~~~~-------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 173 (306)
T 3tdw_A 101 GEDGM-------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT 173 (306)
T ss_dssp HHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred chhhh-------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 76321 12334444455555555555555432
Q ss_pred ---------------CCceEEeccCCCCeeeCC---CCcE-EEeecccccc
Q 041031 129 ---------------KPYYVHRDVKTSNILLDS---NFRA-KIADFGLVKL 160 (313)
Q Consensus 129 ---------------~~~i~h~di~p~nil~~~---~~~~-~l~dfg~~~~ 160 (313)
...++|+|++|.||+++. ++.+ .++||+.+..
T Consensus 174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 123799999999999987 4555 7999998764
No 264
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.62 E-value=2.6e-07 Score=81.03 Aligned_cols=77 Identities=9% Similarity=0.170 Sum_probs=58.2
Q ss_pred cccee-ccCCeEEEEEeEEC--------CcceEEEeccccc------cHHHHHHHHHHHhc--C-C-CceeeeeEEEeC-
Q 041031 16 TSLKI-GQGSYGSVYLGKLR--------GKNAAIKQMKNTK------SKEFSSELKILCKV--H-S-NLIELIGYAAGG- 75 (313)
Q Consensus 16 ~~~~l-g~g~~g~v~~~~~~--------~~~~aiK~~~~~~------~~~~~~e~~~l~~l--h-~-~i~~~~~~~~~~- 75 (313)
..+.| +.|....+|+.... ++.+++|...... ...+..|..+++.+ + . .+.+++.+..+.
T Consensus 24 ~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~ 103 (357)
T 3ats_A 24 VESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD 103 (357)
T ss_dssp EEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST
T ss_pred EEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC
Confidence 34677 88999999988765 6789999876543 35688999999998 4 2 466788777655
Q ss_pred --CeEEEEEeecCCCChhh
Q 041031 76 --DSLFLVYEYAQNGALSD 92 (313)
Q Consensus 76 --~~~~lv~e~~~~~~L~~ 92 (313)
...++|||+++|.++.+
T Consensus 104 ~~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 104 VLGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TTSSCEEEEECCCCBCCCB
T ss_pred ccCCceEEEEecCCCChhh
Confidence 35689999999877654
No 265
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.44 E-value=1.7e-06 Score=73.52 Aligned_cols=74 Identities=16% Similarity=0.194 Sum_probs=58.6
Q ss_pred CccccceeccCCeEEEEEeEEC-CcceEEEeccccc---cHHHHHHHHHHHhc-CC---CceeeeeEEEeCCeEEEEEee
Q 041031 13 NFSTSLKIGQGSYGSVYLGKLR-GKNAAIKQMKNTK---SKEFSSELKILCKV-HS---NLIELIGYAAGGDSLFLVYEY 84 (313)
Q Consensus 13 ~y~~~~~lg~g~~g~v~~~~~~-~~~~aiK~~~~~~---~~~~~~e~~~l~~l-h~---~i~~~~~~~~~~~~~~lv~e~ 84 (313)
.....+.|+.|.++.||++... |+.+++|...... ...+..|++.|+.+ +. .+.+++++. ..++||||
T Consensus 16 ~~~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~ 91 (288)
T 3d1u_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred CccceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEe
Confidence 4455788999999999999876 7889999975443 36789999999999 43 467777763 36899999
Q ss_pred cCCCCh
Q 041031 85 AQNGAL 90 (313)
Q Consensus 85 ~~~~~L 90 (313)
++++++
T Consensus 92 l~g~~~ 97 (288)
T 3d1u_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred cccCCC
Confidence 998875
No 266
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=98.41 E-value=2.8e-06 Score=72.99 Aligned_cols=76 Identities=16% Similarity=0.156 Sum_probs=64.1
Q ss_pred cccceeccCCeEEEEEeEECCcceEEEeccccccHHHHHHHHHHHhc--C--CCceeeeeEEEeCCeEEEEEeecCCCCh
Q 041031 15 STSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV--H--SNLIELIGYAAGGDSLFLVYEYAQNGAL 90 (313)
Q Consensus 15 ~~~~~lg~g~~g~v~~~~~~~~~~aiK~~~~~~~~~~~~e~~~l~~l--h--~~i~~~~~~~~~~~~~~lv~e~~~~~~L 90 (313)
.-.+.|+.|....+|+....+..+++|.........+..|...|+.+ . ..+.+++.+.......++|||++++.++
T Consensus 39 ~~~~~l~gG~~n~~y~v~~~~~~~vlK~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~ 118 (312)
T 3jr1_A 39 KHKEKLYSGEMNEIWLINDEVQTVFVKINERSYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN 118 (312)
T ss_dssp CEEEEECCSSSSEEEEEESSSCEEEEEEEEGGGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred eeeEEeCCccceeeeEEEECCCeEEEEeCCcccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence 34578899999999999887888999998776667788999999998 3 4578888888888889999999998765
No 267
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.29 E-value=8.2e-06 Score=70.79 Aligned_cols=73 Identities=15% Similarity=0.214 Sum_probs=46.9
Q ss_pred cceeccCCeEEEEEeEECCcceEEEeccccccHHHHHHHHHHHhc--C-CCceeeee------EEEeCCeEEEEEeecCC
Q 041031 17 SLKIGQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV--H-SNLIELIG------YAAGGDSLFLVYEYAQN 87 (313)
Q Consensus 17 ~~~lg~g~~g~v~~~~~~~~~~aiK~~~~~~~~~~~~e~~~l~~l--h-~~i~~~~~------~~~~~~~~~lv~e~~~~ 87 (313)
++.|+.|..+.||+....+..+++|..... ...+..|..+++.+ + -.+.+++. +.......+++|+|++|
T Consensus 37 ~~~l~gG~~n~~~~v~~~~~~~vlk~~~~~-~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i~G 115 (346)
T 2q83_A 37 IDVIQGNQMALVWKVHTDSGAVCLKRIHRP-EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWIEG 115 (346)
T ss_dssp EEECC----CEEEEEEETTEEEEEEEECSC-HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECCCC
T ss_pred eeeccccccCcEEEEEeCCCCEEEEecCCC-HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEeecC
Confidence 345666778999999887777999998863 34555677777777 1 12344443 12346678999999998
Q ss_pred CCh
Q 041031 88 GAL 90 (313)
Q Consensus 88 ~~L 90 (313)
.++
T Consensus 116 ~~~ 118 (346)
T 2q83_A 116 RPF 118 (346)
T ss_dssp BCC
T ss_pred ccC
Confidence 655
No 268
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=98.13 E-value=5.5e-06 Score=66.25 Aligned_cols=102 Identities=11% Similarity=0.058 Sum_probs=66.5
Q ss_pred CChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccccCChhh
Q 041031 88 GALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEI 167 (313)
Q Consensus 88 ~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 167 (313)
.||.+.|. ..+.+++++++|.++.|.+.+|.-+-.... -...=+.|..|++..+|.|-+.+ +.+.
T Consensus 33 vSL~eIL~----~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~--~~~~i~~~~~i~l~~dG~V~f~~-~~s~-------- 97 (229)
T 2yle_A 33 LSLEEILR----LYNQPINEEQAWAVCYQCCGSLRAAARRRQ--PRHRVRSAAQIRVWRDGAVTLAP-AADD-------- 97 (229)
T ss_dssp EEHHHHHH----HHTSCCCHHHHHHHHHHHHHHHHHHHHTTC--CCCCCCSGGGEEEETTSCEEECC-C-----------
T ss_pred ccHHHHHH----HcCCCcCHHHHHHHHHHHHHHHHhhhhccc--CCceecCCcceEEecCCceeccc-cccc--------
Confidence 46888885 567899999999999999999887632110 01233457899999999987764 1110
Q ss_pred hhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCC
Q 041031 168 AAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQ 212 (313)
Q Consensus 168 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~ 212 (313)
.....|.|||... ...+.+.=|||||+++|.-+--..
T Consensus 98 -------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL 134 (229)
T 2yle_A 98 -------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGL 134 (229)
T ss_dssp ----------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTC
T ss_pred -------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCC
Confidence 1233567888763 344677789999999999886443
No 269
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.12 E-value=1.3e-05 Score=71.33 Aligned_cols=71 Identities=17% Similarity=0.077 Sum_probs=49.0
Q ss_pred ccceeccCCeEEEEEeEEC--CcceEEEecccc----------ccHHHHHHHHHHHhc---CCC-ceeeeeEEEeCCeEE
Q 041031 16 TSLKIGQGSYGSVYLGKLR--GKNAAIKQMKNT----------KSKEFSSELKILCKV---HSN-LIELIGYAAGGDSLF 79 (313)
Q Consensus 16 ~~~~lg~g~~g~v~~~~~~--~~~~aiK~~~~~----------~~~~~~~e~~~l~~l---h~~-i~~~~~~~~~~~~~~ 79 (313)
..+.+|.|..+.||++... ++.++||...+. ..+....|.++++.+ .+. +.+++.+ +....+
T Consensus 34 ~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~ 111 (397)
T 2olc_A 34 TCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAV 111 (397)
T ss_dssp EEEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTE
T ss_pred EEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccE
Confidence 3668999999999999654 678999976432 234467799999887 233 3455543 344568
Q ss_pred EEEeecCCC
Q 041031 80 LVYEYAQNG 88 (313)
Q Consensus 80 lv~e~~~~~ 88 (313)
+|||++++.
T Consensus 112 lvmE~l~g~ 120 (397)
T 2olc_A 112 TVMEDLSHL 120 (397)
T ss_dssp EEECCCTTS
T ss_pred EEEEeCCCc
Confidence 999999764
No 270
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=98.09 E-value=9.4e-05 Score=63.58 Aligned_cols=159 Identities=11% Similarity=0.141 Sum_probs=92.3
Q ss_pred cChHHHHHHhcCccc-----cceeccCCeEEEEEeEECCcceEEEecccc-ccHHHHHHHHHHHhc--CC-CceeeeeE-
Q 041031 2 FSYNEVRDATSNFST-----SLKIGQGSYGSVYLGKLRGKNAAIKQMKNT-KSKEFSSELKILCKV--HS-NLIELIGY- 71 (313)
Q Consensus 2 ~~~~~~~~~~~~y~~-----~~~lg~g~~g~v~~~~~~~~~~aiK~~~~~-~~~~~~~e~~~l~~l--h~-~i~~~~~~- 71 (313)
+|.+.+.....+|.+ .+.++.|....+|+....+..+++|..... ..+.+..|..+++.+ +. .+.+++..
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g~~vlk~~~~~~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~ 86 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDPLILTLYEKRVEKNDLPFFLGLMQHLAAKGLSCPLPLPRK 86 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCCEEEEEECC---CCHHHHHHHHHHHHHHTTCCCCCBCCBT
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCccEEEEEeCCCCCHHHHHHHHHHHHHHHHCCCCCCcccCCC
Confidence 467788888888865 345667888999999887668999998873 556778889888888 31 12333322
Q ss_pred -----EEeCCeEEEEEeecCCCChhhh--------------hcC---CCCCCC-CCcc---HHHHHH------------H
Q 041031 72 -----AAGGDSLFLVYEYAQNGALSDH--------------LHW---PSVKGK-KPLA---WTTRVQ------------I 113 (313)
Q Consensus 72 -----~~~~~~~~lv~e~~~~~~L~~~--------------l~~---~~~~~~-~~l~---~~~~~~------------~ 113 (313)
.......++++++++|.++... ++. ...... .... +..... +
T Consensus 87 ~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l 166 (322)
T 2ppq_A 87 DGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGL 166 (322)
T ss_dssp TCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTH
T ss_pred CCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhh
Confidence 1234567899999988654210 000 000000 0001 111000 0
Q ss_pred HHHHHHHHHHHhcC----CCCceEEeccCCCCeeeCCCCcEEEeecccccc
Q 041031 114 ALDAAKGLEYIHQY----TKPYYVHRDVKTSNILLDSNFRAKIADFGLVKL 160 (313)
Q Consensus 114 ~~~i~~~l~~lh~~----~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~ 160 (313)
...+...+..+... .+..++|+|+++.||++++++.+.++||+.+..
T Consensus 167 ~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 167 REEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp HHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 01133334444421 122389999999999998876557999987763
No 271
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.98 E-value=3.5e-05 Score=69.10 Aligned_cols=71 Identities=15% Similarity=0.142 Sum_probs=46.4
Q ss_pred cccceeccCCeEEEEEeEECCcceEEEeccc-------c-c--cHHHHHHHHHHHhc----CCCceeeeeEEEeCCeEEE
Q 041031 15 STSLKIGQGSYGSVYLGKLRGKNAAIKQMKN-------T-K--SKEFSSELKILCKV----HSNLIELIGYAAGGDSLFL 80 (313)
Q Consensus 15 ~~~~~lg~g~~g~v~~~~~~~~~~aiK~~~~-------~-~--~~~~~~e~~~l~~l----h~~i~~~~~~~~~~~~~~l 80 (313)
..++.+|.|..+.||++...++.++||...+ . . ......|.+++..+ ...+.+++.+. ....++
T Consensus 37 ~~i~~l~~G~~n~vyrv~~~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~l 114 (420)
T 2pyw_A 37 LVIKEVGDGNLNFVFIVVGSSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALI 114 (420)
T ss_dssp CEEEECCCSSSCEEEEEECSSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEE
T ss_pred eEEEEccCCCcEEEEEEEcCCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEE
Confidence 3467889999999999987778899994321 1 1 12333344444333 34566777665 456789
Q ss_pred EEeec-CC
Q 041031 81 VYEYA-QN 87 (313)
Q Consensus 81 v~e~~-~~ 87 (313)
|||++ ++
T Consensus 115 v~e~l~~g 122 (420)
T 2pyw_A 115 GMRYLEPP 122 (420)
T ss_dssp EECCCCTT
T ss_pred EEeecCCc
Confidence 99999 76
No 272
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.92 E-value=9.1e-05 Score=63.14 Aligned_cols=72 Identities=11% Similarity=0.065 Sum_probs=48.6
Q ss_pred ccccceeccCCeEEEEEeEECCcceEEEeccccc--cHHHHHHHHHHHhc--CCCceeeeeEEEeCCeEEEEEeec-CCC
Q 041031 14 FSTSLKIGQGSYGSVYLGKLRGKNAAIKQMKNTK--SKEFSSELKILCKV--HSNLIELIGYAAGGDSLFLVYEYA-QNG 88 (313)
Q Consensus 14 y~~~~~lg~g~~g~v~~~~~~~~~~aiK~~~~~~--~~~~~~e~~~l~~l--h~~i~~~~~~~~~~~~~~lv~e~~-~~~ 88 (313)
+.-++.|+.|....+|+. +.+++|+..... ......|..+++.+ +.-..+++.. +...-+++++|+ +|.
T Consensus 20 ~~~i~~l~gG~tN~~~~~----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~ 93 (301)
T 3dxq_A 20 YTGPLERLGGLTNLVFRA----GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQ 93 (301)
T ss_dssp CCSCEEEESCSSEEEEEE----TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCE
T ss_pred ccceeEcCCcccccccee----eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCc
Confidence 444788999999999998 679999887542 22346788888888 3222455544 333346899999 665
Q ss_pred Chh
Q 041031 89 ALS 91 (313)
Q Consensus 89 ~L~ 91 (313)
++.
T Consensus 94 ~l~ 96 (301)
T 3dxq_A 94 TMS 96 (301)
T ss_dssp ECC
T ss_pred cCC
Confidence 553
No 273
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.90 E-value=0.0002 Score=60.65 Aligned_cols=76 Identities=14% Similarity=0.164 Sum_probs=56.1
Q ss_pred hcCccccceeccCCeEEEEEeEEC-CcceEEEeccccc---cHHHHHHHHHHHhcCC----CceeeeeEEEeCCeEEEEE
Q 041031 11 TSNFSTSLKIGQGSYGSVYLGKLR-GKNAAIKQMKNTK---SKEFSSELKILCKVHS----NLIELIGYAAGGDSLFLVY 82 (313)
Q Consensus 11 ~~~y~~~~~lg~g~~g~v~~~~~~-~~~~aiK~~~~~~---~~~~~~e~~~l~~lh~----~i~~~~~~~~~~~~~~lv~ 82 (313)
..+..-++.+|.|..+.||+.+.. |+.+++|+..... ...+..|...|+.++. -+.+++++ +. .+++|
T Consensus 14 G~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~~--~~lv~ 89 (288)
T 3f7w_A 14 GREVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--DD--RTLAM 89 (288)
T ss_dssp CCCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--ET--TEEEE
T ss_pred CCCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--cC--ceEEE
Confidence 456777889999999999999987 7899999876543 3457889999999821 24455544 22 37899
Q ss_pred eecCCCCh
Q 041031 83 EYAQNGAL 90 (313)
Q Consensus 83 e~~~~~~L 90 (313)
|++.++..
T Consensus 90 e~l~~~~~ 97 (288)
T 3f7w_A 90 EWVDERPP 97 (288)
T ss_dssp ECCCCCCC
T ss_pred EeecccCC
Confidence 99987654
No 274
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.87 E-value=5.7e-05 Score=65.36 Aligned_cols=145 Identities=13% Similarity=0.071 Sum_probs=76.9
Q ss_pred cceeccCCeEE-EEEeEEC-CcceEEEeccccccHHHHHHHHHHHhc--CC-CceeeeeEEEeCCeEEEEEeecCCCChh
Q 041031 17 SLKIGQGSYGS-VYLGKLR-GKNAAIKQMKNTKSKEFSSELKILCKV--HS-NLIELIGYAAGGDSLFLVYEYAQNGALS 91 (313)
Q Consensus 17 ~~~lg~g~~g~-v~~~~~~-~~~~aiK~~~~~~~~~~~~e~~~l~~l--h~-~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (313)
++.|+.|.... +|+.... ++.+++|...+.....+..|+.+++.+ +. .+.+++.+.... -+++||++++.++.
T Consensus 23 ~~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~--g~ll~e~l~~~~l~ 100 (333)
T 3csv_A 23 RTPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEGGDTQPFVDLAQYLRNLDISAPEIYAEEHAR--GLLLIEDLGDALFT 100 (333)
T ss_dssp ECC--------CCEEEECTTCCEEEEEECCTTTTCCSHHHHHHHHHHHHTTCBCCCEEEEETTT--TEEEECCCCSCBHH
T ss_pred eeECCCCCCCceEEEEEcCCCCeEEEEECCCCCCccccHHHHHHHHHHhCCCCCCceeeecCCC--CEEEEeeCCCcchH
Confidence 44566555544 6677664 677888876655435667788888888 32 245666653332 37899999776665
Q ss_pred hhhcCCCC---------------------CCCCCccHHHHH-------HH-------------HHHHHHHHHHHh---cC
Q 041031 92 DHLHWPSV---------------------KGKKPLAWTTRV-------QI-------------ALDAAKGLEYIH---QY 127 (313)
Q Consensus 92 ~~l~~~~~---------------------~~~~~l~~~~~~-------~~-------------~~~i~~~l~~lh---~~ 127 (313)
+.+..... .....+...... .+ ...+...+..+. ..
T Consensus 101 ~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~ 180 (333)
T 3csv_A 101 EVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQLE 180 (333)
T ss_dssp HHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHCC
T ss_pred HHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhccc
Confidence 43321100 000111111100 00 001111122221 11
Q ss_pred CCCceEEeccCCCCeeeCCC----CcEEEeeccccccccC
Q 041031 128 TKPYYVHRDVKTSNILLDSN----FRAKIADFGLVKLLEH 163 (313)
Q Consensus 128 ~~~~i~h~di~p~nil~~~~----~~~~l~dfg~~~~~~~ 163 (313)
....++|+|+.+.||+++.+ +.+.++||+.+.....
T Consensus 181 ~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~~ 220 (333)
T 3csv_A 181 GDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHR 220 (333)
T ss_dssp SCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEECT
T ss_pred CCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCCC
Confidence 12339999999999999874 6789999998876444
No 275
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.70 E-value=0.00069 Score=58.25 Aligned_cols=87 Identities=9% Similarity=0.103 Sum_probs=57.6
Q ss_pred ChHHHHHHhcCccc-----cceeccCCeEEEEEeEEC-CcceEEEecccc--ccHHHHHHHHHHHhc--CC-CceeeeeE
Q 041031 3 SYNEVRDATSNFST-----SLKIGQGSYGSVYLGKLR-GKNAAIKQMKNT--KSKEFSSELKILCKV--HS-NLIELIGY 71 (313)
Q Consensus 3 ~~~~~~~~~~~y~~-----~~~lg~g~~g~v~~~~~~-~~~~aiK~~~~~--~~~~~~~e~~~l~~l--h~-~i~~~~~~ 71 (313)
|.+.+......|-+ +..++ |....||+.... |+.+++|...+. ....+..|..+++.+ +. .+.+++..
T Consensus 12 ~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~ 90 (328)
T 1zyl_A 12 HPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAF 90 (328)
T ss_dssp CHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCB
T ss_pred CHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeec
Confidence 44556666665533 34566 888899988765 568999998753 456778899888888 21 13444443
Q ss_pred -----EEeCCeEEEEEeecCCCCh
Q 041031 72 -----AAGGDSLFLVYEYAQNGAL 90 (313)
Q Consensus 72 -----~~~~~~~~lv~e~~~~~~L 90 (313)
....+..++++++++|.++
T Consensus 91 ~g~~~~~~~g~~~~l~~~i~G~~~ 114 (328)
T 1zyl_A 91 NGQTLLNHQGFYFAVFPSVGGRQF 114 (328)
T ss_dssp TTBSCEEETTEEEEEEECCCCEEC
T ss_pred CCcEEEEECCEEEEEEEecCCCCC
Confidence 1234566889999987554
No 276
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.66 E-value=0.0002 Score=64.25 Aligned_cols=71 Identities=18% Similarity=0.210 Sum_probs=50.8
Q ss_pred ccceeccCCeEEEEEeEEC---------CcceEEEecccccc-HHHHHHHHHHHhc--CCCceeeeeEEEeCCeEEEEEe
Q 041031 16 TSLKIGQGSYGSVYLGKLR---------GKNAAIKQMKNTKS-KEFSSELKILCKV--HSNLIELIGYAAGGDSLFLVYE 83 (313)
Q Consensus 16 ~~~~lg~g~~g~v~~~~~~---------~~~~aiK~~~~~~~-~~~~~e~~~l~~l--h~~i~~~~~~~~~~~~~~lv~e 83 (313)
.++.|+.|....+|+.... ++.+++|+...... +.+..|..+++.+ +.-..++++.+.+ .+|++
T Consensus 77 ~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e 152 (429)
T 1nw1_A 77 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE 152 (429)
T ss_dssp EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred EEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence 3567788889999999865 36789998855333 6667899999998 4333566665542 38999
Q ss_pred ecCCCCh
Q 041031 84 YAQNGAL 90 (313)
Q Consensus 84 ~~~~~~L 90 (313)
|++|.+|
T Consensus 153 ~l~G~~l 159 (429)
T 1nw1_A 153 YIPSRPL 159 (429)
T ss_dssp CCCEEEC
T ss_pred EeCCccc
Confidence 9987554
No 277
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.49 E-value=0.00049 Score=60.57 Aligned_cols=140 Identities=15% Similarity=0.142 Sum_probs=81.8
Q ss_pred cceeccCCeEEEEEeEEC---------CcceEEEecccc--ccHHHHHHHHHHHhc--CCCceeeeeEEEeCCeEEEEEe
Q 041031 17 SLKIGQGSYGSVYLGKLR---------GKNAAIKQMKNT--KSKEFSSELKILCKV--HSNLIELIGYAAGGDSLFLVYE 83 (313)
Q Consensus 17 ~~~lg~g~~g~v~~~~~~---------~~~~aiK~~~~~--~~~~~~~e~~~l~~l--h~~i~~~~~~~~~~~~~~lv~e 83 (313)
++.+..|....+|+.... ++.+++|+.... ....+.+|.++++.+ +.-..++++.+.+ .+|+|
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 456777888999998764 367999986442 345567899999998 4334566666543 28999
Q ss_pred ecCCCChhhh-h----------------cCCCCCCCCCc--cHHHHHHHHHHHHH-------------------HHH---
Q 041031 84 YAQNGALSDH-L----------------HWPSVKGKKPL--AWTTRVQIALDAAK-------------------GLE--- 122 (313)
Q Consensus 84 ~~~~~~L~~~-l----------------~~~~~~~~~~l--~~~~~~~~~~~i~~-------------------~l~--- 122 (313)
|++|.+|..- + ......-.... -...+..++.++-. .+.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 9998665421 1 11110011111 23444445544322 112
Q ss_pred -HHhcC-CCCceEEeccCCCCeeeCCC----CcEEEeecccccc
Q 041031 123 -YIHQY-TKPYYVHRDVKTSNILLDSN----FRAKIADFGLVKL 160 (313)
Q Consensus 123 -~lh~~-~~~~i~h~di~p~nil~~~~----~~~~l~dfg~~~~ 160 (313)
.|... ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 22222 12238999999999999876 6899999998763
No 278
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=97.47 E-value=0.0011 Score=59.99 Aligned_cols=71 Identities=17% Similarity=0.102 Sum_probs=48.3
Q ss_pred ccceeccCCeEEEEEeEECC--cceEEEeccccccH--HHHHHHHHHHhc-CCC-ceeeeeEEEeCCeEEEEEeecCCCC
Q 041031 16 TSLKIGQGSYGSVYLGKLRG--KNAAIKQMKNTKSK--EFSSELKILCKV-HSN-LIELIGYAAGGDSLFLVYEYAQNGA 89 (313)
Q Consensus 16 ~~~~lg~g~~g~v~~~~~~~--~~~aiK~~~~~~~~--~~~~e~~~l~~l-h~~-i~~~~~~~~~~~~~~lv~e~~~~~~ 89 (313)
.++.|+.|....+|+....+ ..+++|+....... +...|..+++.+ ..+ ..++++.+. + .+|++|++|.+
T Consensus 112 ~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 112 EFQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 35678889999999998876 78999987543322 236899999999 323 356676663 3 25999998755
Q ss_pred h
Q 041031 90 L 90 (313)
Q Consensus 90 L 90 (313)
|
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 5
No 279
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=97.39 E-value=0.00082 Score=58.94 Aligned_cols=70 Identities=11% Similarity=0.033 Sum_probs=45.6
Q ss_pred cceeccCCeEEEEEeEECC----------cceEEEecccccc--HHHHHHHHHHHhc--CCCceeeeeEEEeCCeEEEEE
Q 041031 17 SLKIGQGSYGSVYLGKLRG----------KNAAIKQMKNTKS--KEFSSELKILCKV--HSNLIELIGYAAGGDSLFLVY 82 (313)
Q Consensus 17 ~~~lg~g~~g~v~~~~~~~----------~~~aiK~~~~~~~--~~~~~e~~~l~~l--h~~i~~~~~~~~~~~~~~lv~ 82 (313)
++.++.|....+|+....+ +.+++|+...... .....|..+++.+ +.-..++++.. . -++++
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~ 113 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE 113 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence 5577888889999998763 6789998765432 2346889999988 32244666554 2 26899
Q ss_pred eecCCCCh
Q 041031 83 EYAQNGAL 90 (313)
Q Consensus 83 e~~~~~~L 90 (313)
+|++|.++
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99987554
No 280
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=97.38 E-value=0.0011 Score=57.58 Aligned_cols=71 Identities=14% Similarity=0.067 Sum_probs=47.3
Q ss_pred cceec--cCCeEEEEEeEECCcceEEEeccccccHHHHHHHHHHHhc--C--CCceeeeeE------EEeCCeEEEEEee
Q 041031 17 SLKIG--QGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV--H--SNLIELIGY------AAGGDSLFLVYEY 84 (313)
Q Consensus 17 ~~~lg--~g~~g~v~~~~~~~~~~aiK~~~~~~~~~~~~e~~~l~~l--h--~~i~~~~~~------~~~~~~~~lv~e~ 84 (313)
++.+. .|....||+....+..+++|+...... ..|+.+++.+ + |.+.+++.. .......+++|+|
T Consensus 26 ~~~l~~G~g~~N~vy~v~~~~g~~vLK~~~~~~~---~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~ 102 (339)
T 3i1a_A 26 AQFIQGGADTNAFAYQADSESKSYFIKLKYGYHD---EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPF 102 (339)
T ss_dssp EEEETTTSCSSCEEEEEECSSCEEEEEEEECSSC---CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEEC
T ss_pred eEEeeccCccccceEEEEeCCCCEEEEEecCccc---hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEec
Confidence 34453 333689999987755999998776542 4677777777 2 224455433 2345678999999
Q ss_pred cCCCCh
Q 041031 85 AQNGAL 90 (313)
Q Consensus 85 ~~~~~L 90 (313)
++|..+
T Consensus 103 i~G~~~ 108 (339)
T 3i1a_A 103 IHAPNG 108 (339)
T ss_dssp CCCCBT
T ss_pred cCCCcC
Confidence 998766
No 281
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.90 E-value=0.0071 Score=53.50 Aligned_cols=139 Identities=16% Similarity=0.175 Sum_probs=80.5
Q ss_pred cceeccCCeEEEEEeEECC---------cceEEEecccccc---------------------HHHHHHHHHHHhc--CCC
Q 041031 17 SLKIGQGSYGSVYLGKLRG---------KNAAIKQMKNTKS---------------------KEFSSELKILCKV--HSN 64 (313)
Q Consensus 17 ~~~lg~g~~g~v~~~~~~~---------~~~aiK~~~~~~~---------------------~~~~~e~~~l~~l--h~~ 64 (313)
++.|..|-...+|+....+ ..+++++.-.... +....|..+++.+ +.-
T Consensus 57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi 136 (401)
T 3f2s_A 57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL 136 (401)
T ss_dssp EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence 4456669999999987652 5688888644321 1122488888888 444
Q ss_pred ceeeeeEEEeCCeEEEEEeecCCCChhhh-h----------------cCCCCC-CCCCc-cHHHHHHHHHHHH-------
Q 041031 65 LIELIGYAAGGDSLFLVYEYAQNGALSDH-L----------------HWPSVK-GKKPL-AWTTRVQIALDAA------- 118 (313)
Q Consensus 65 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~-l----------------~~~~~~-~~~~l-~~~~~~~~~~~i~------- 118 (313)
..++++++.+ . +|++|++|.+|..- + ...... ...+. ....+..++.++.
T Consensus 137 ~Pkl~~~~~~--G--~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~ 212 (401)
T 3f2s_A 137 GPKLYGIFPQ--G--RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEE 212 (401)
T ss_dssp SCCEEEEETT--E--EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSH
T ss_pred CCeEEEEeCC--C--eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcch
Confidence 5677777643 2 89999998665321 1 111000 11111 1223333333321
Q ss_pred ---------------HHH----HHHhcCC-CCceEEeccCCCCeeeCCC------CcEEEeeccccc
Q 041031 119 ---------------KGL----EYIHQYT-KPYYVHRDVKTSNILLDSN------FRAKIADFGLVK 159 (313)
Q Consensus 119 ---------------~~l----~~lh~~~-~~~i~h~di~p~nil~~~~------~~~~l~dfg~~~ 159 (313)
..+ ..+...+ +..++|+|+.+.||+++++ +.+.++||..+.
T Consensus 213 ~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 213 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 111 2232221 2228999999999999876 789999998765
No 282
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=96.83 E-value=0.0049 Score=54.98 Aligned_cols=71 Identities=10% Similarity=0.029 Sum_probs=50.5
Q ss_pred ccceeccCCeEEEEEeEEC---------CcceEEEeccccc--cHHHHHHHHHHHhc--CCCceeeeeEEEeCCeEEEEE
Q 041031 16 TSLKIGQGSYGSVYLGKLR---------GKNAAIKQMKNTK--SKEFSSELKILCKV--HSNLIELIGYAAGGDSLFLVY 82 (313)
Q Consensus 16 ~~~~lg~g~~g~v~~~~~~---------~~~~aiK~~~~~~--~~~~~~e~~~l~~l--h~~i~~~~~~~~~~~~~~lv~ 82 (313)
.++.+..|....+|+.... ++.+++|+..... .-+..+|..+++.+ +.-..++++.+. -++|+
T Consensus 74 ~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~ 149 (424)
T 3mes_A 74 EVKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIE 149 (424)
T ss_dssp EEEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEE
Confidence 3567777889999999876 5789999876532 22356899999998 333455665432 26899
Q ss_pred eecCCCCh
Q 041031 83 EYAQNGAL 90 (313)
Q Consensus 83 e~~~~~~L 90 (313)
+|++|.+|
T Consensus 150 efI~G~~l 157 (424)
T 3mes_A 150 EFIDGEPL 157 (424)
T ss_dssp ECCCSEEC
T ss_pred EEeCCccC
Confidence 99998664
No 283
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.68 E-value=0.064 Score=47.42 Aligned_cols=29 Identities=28% Similarity=0.515 Sum_probs=24.7
Q ss_pred eEEeccCCCCeee------CCCCcEEEeecccccc
Q 041031 132 YVHRDVKTSNILL------DSNFRAKIADFGLVKL 160 (313)
Q Consensus 132 i~h~di~p~nil~------~~~~~~~l~dfg~~~~ 160 (313)
++|+|+.+.||++ ++++.+.++||.++..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4567799999998764
No 284
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=95.12 E-value=0.052 Score=43.29 Aligned_cols=124 Identities=10% Similarity=0.097 Sum_probs=81.3
Q ss_pred HHHHHHHhcCCCceeeeeEEEeCCeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHHHHhcCCCCce
Q 041031 53 SELKILCKVHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLEYIHQYTKPYY 132 (313)
Q Consensus 53 ~e~~~l~~lh~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~~~~i 132 (313)
.|+.+|...||+++.. ......+.+.+.++.-+ ....+- .-...+....++++.+++....+++ ..
T Consensus 35 ~el~LL~~~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~------~ik~~~~~eKlr~l~ni~~l~~~~~-~r---- 100 (215)
T 4ann_A 35 HLMYLLEQHSPYFIDA-ELTELRDSFQIHYDIND--NHTPFD------NIKSFTKNEKLRYLLNIKNLEEVNR-TR---- 100 (215)
T ss_dssp GGGGGGGSCCTTBCCE-EEEECSSEEEEEECCCT--TSEEGG------GGGGSCHHHHHHHHHHGGGGGGGGG-SS----
T ss_pred HHHHHHhccCCcccce-EEEEcccEEEEEEEcCc--ccCCHH------HHHhcCHHHHHHHHHHHHHHHHHhc-Cc----
Confidence 3555566658988877 45566666666666543 222221 2245788889999999999884443 22
Q ss_pred EEeccCCCCeeeCCCCcEEEeeccccccccCChhhhhhcccccccccccCCccccCCCCCCccchhhHHHHHHHHHhCCC
Q 041031 133 VHRDVKTSNILLDSNFRAKIADFGLVKLLEHSPEIAAAASRIVGTFGYLAPEYVRDGCVTTKSDVYAFGVVLMELITGQQ 212 (313)
Q Consensus 133 ~h~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~~~tg~~ 212 (313)
+|.-+.|+|++++.++.++++-.|+-... +|. ..+...=.-..=|++..+++++.
T Consensus 101 ~tf~L~P~NL~f~~~~~p~i~~RGik~~l--------------------~P~-----~~~ee~fL~qyKAliiall~~K~ 155 (215)
T 4ann_A 101 YTFVLAPDELFFTRDGLPIAKTRGLQNVV--------------------DPL-----PVSEAEFLTRYKALVICAFNEKQ 155 (215)
T ss_dssp EECCCSGGGEEECTTSCEEESCCEETTTB--------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTC
T ss_pred eEEEEecceEEEcCCCCEEEEEccCccCC--------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCC
Confidence 78899999999999999999987763322 221 11111222355677888888888
Q ss_pred Ccc
Q 041031 213 ALS 215 (313)
Q Consensus 213 p~~ 215 (313)
.|.
T Consensus 156 ~Fe 158 (215)
T 4ann_A 156 SFD 158 (215)
T ss_dssp CHH
T ss_pred CHH
Confidence 774
No 285
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=93.46 E-value=0.14 Score=40.98 Aligned_cols=91 Identities=12% Similarity=0.153 Sum_probs=63.4
Q ss_pred HHHHHHhcCCCceeeeeEEEeCCeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHHHHHHH-HHhcCCCCce
Q 041031 54 ELKILCKVHSNLIELIGYAAGGDSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDAAKGLE-YIHQYTKPYY 132 (313)
Q Consensus 54 e~~~l~~lh~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i~~~l~-~lh~~~~~~i 132 (313)
++.++..-||++ -...-.+++.+.+.++.-+++.-...+ ..++....++++.+++.... +++. -
T Consensus 41 e~~lL~~~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i--------~~~~~~eKlrll~nl~~L~~~~~~~-----r 105 (219)
T 4ano_A 41 ELEVLKEVDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI--------RKTTLLSRIRAAIHLVSKVKHHSAR-----R 105 (219)
T ss_dssp GGGGGGGSCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH--------HTSCHHHHHHHHHHHHHHHSSCCSS-----S
T ss_pred HHHHHhccCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH--------HhcCHHHHHHHHHHHHHHHHHhhhC-----c
Confidence 344455558888 444556777777777765333222233 34778888998999888766 3332 3
Q ss_pred EEeccCCCCeeeCCCCcEEEeeccccc
Q 041031 133 VHRDVKTSNILLDSNFRAKIADFGLVK 159 (313)
Q Consensus 133 ~h~di~p~nil~~~~~~~~l~dfg~~~ 159 (313)
++.-+.|+|++++.++.+++.-.|+-.
T Consensus 106 ~tf~l~P~NL~f~~~~~p~i~hRGi~~ 132 (219)
T 4ano_A 106 LIFIVCPENLMFNRALEPFFLHVGVKE 132 (219)
T ss_dssp EECCCCGGGEEECTTCCEEESCCEETT
T ss_pred eeEEEeCceEEEeCCCcEEEEEcCCcc
Confidence 788999999999999999999888643
No 286
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=71.55 E-value=0.73 Score=41.46 Aligned_cols=55 Identities=4% Similarity=-0.014 Sum_probs=17.3
Q ss_pred ccceeccCCeEEEEEeEECC--cceEE------Eeccccc-----cHHHHHHHHHHHhc-CCCceeeeeEEE
Q 041031 16 TSLKIGQGSYGSVYLGKLRG--KNAAI------KQMKNTK-----SKEFSSELKILCKV-HSNLIELIGYAA 73 (313)
Q Consensus 16 ~~~~lg~g~~g~v~~~~~~~--~~~ai------K~~~~~~-----~~~~~~e~~~l~~l-h~~i~~~~~~~~ 73 (313)
+.+.+| ||.||+|.+.+ .+||+ |..+... ...+.+|..+++.+ |||+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 456666 99999999874 57888 6655432 23466788888888 999999887754
No 287
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=61.48 E-value=38 Score=28.80 Aligned_cols=80 Identities=14% Similarity=0.089 Sum_probs=42.9
Q ss_pred CeEEEEEeecCCCChhhhhcCCCCCCCCCccHHHHHHHHHHH--HHHHHHHhcCC-CCceEE-eccCCCCeeeCCC-CcE
Q 041031 76 DSLFLVYEYAQNGALSDHLHWPSVKGKKPLAWTTRVQIALDA--AKGLEYIHQYT-KPYYVH-RDVKTSNILLDSN-FRA 150 (313)
Q Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~i--~~~l~~lh~~~-~~~i~h-~di~p~nil~~~~-~~~ 150 (313)
+..+++|+|.+|..|.+.-... -...+..+ .+.++ +-++..+..+. +-+... ..-+++||+++++ +.+
T Consensus 155 ~~~~l~meyv~G~~L~e~~~~~---~~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~ 227 (342)
T 1cja_A 155 QANILLMELVRGITLNKLTTTS---APEVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATV 227 (342)
T ss_dssp CSEEEEEECCCEEESTTCCSSS---HHHHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCE
T ss_pred ccceehhhhcCCCccccchhhh---hhhhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeE
Confidence 3577999999877665542100 00112222 23332 23344444443 222111 1247899999764 458
Q ss_pred EEeecccccccc
Q 041031 151 KIADFGLVKLLE 162 (313)
Q Consensus 151 ~l~dfg~~~~~~ 162 (313)
.++|-+.+..-.
T Consensus 228 ~~IDhn~af~~~ 239 (342)
T 1cja_A 228 VPIDSKIIPLDA 239 (342)
T ss_dssp EECSCCCCCCCS
T ss_pred EEEcCCccccCC
Confidence 899998886533
No 288
>3eps_A Isocitrate dehydrogenase kinase/phosphatase; ATP-binding, glyoxylate bypass, nucleotide-binding, protein phosphatase; HET: AMP ATP; 2.80A {Escherichia coli O157} PDB: 3lcb_A* 3lc6_A*
Probab=49.34 E-value=1.1e+02 Score=27.79 Aligned_cols=56 Identities=7% Similarity=0.025 Sum_probs=50.0
Q ss_pred ccHHHHHHHHHHHHHHHHHHhcCCCCceEEeccCCCCeeeCCCCcEEEeeccccccccC
Q 041031 105 LAWTTRVQIALDAAKGLEYIHQYTKPYYVHRDVKTSNILLDSNFRAKIADFGLVKLLEH 163 (313)
Q Consensus 105 l~~~~~~~~~~~i~~~l~~lh~~~~~~i~h~di~p~nil~~~~~~~~l~dfg~~~~~~~ 163 (313)
-+.+++...+...-.|++-|-..+ |..||.-.+|+=|+..|+|++.|+...+..++
T Consensus 429 a~~~~~~~av~eYG~AIKqLAaAN---IFPGDML~KNFGVTRhgRVVFYDYDEI~ylTd 484 (578)
T 3eps_A 429 VEGQQLRDAIEEYGNAIRQLAAAN---IFPGDMLFKNFGVTRHGRVVFYDYDEICYMTE 484 (578)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCGGGCEESTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhc---CCCcccccccCCccccceEEEecccceeeecc
Confidence 356677888899999999999999 99999999999999999999999998877664
No 289
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=30.92 E-value=28 Score=32.83 Aligned_cols=25 Identities=32% Similarity=0.410 Sum_probs=22.8
Q ss_pred eccCCCCeeeCCCCcEEEeeccccc
Q 041031 135 RDVKTSNILLDSNFRAKIADFGLVK 159 (313)
Q Consensus 135 ~di~p~nil~~~~~~~~l~dfg~~~ 159 (313)
||=.++||+++.+|.+.=+|||.+-
T Consensus 551 GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 551 GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred CCCCCcceEEeCCCCEEEEeehhhh
Confidence 4888999999999999999999864
No 290
>1k4u_P Phagocyte NADPH oxidase subunit P47PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens}
Probab=28.41 E-value=22 Score=18.43 Aligned_cols=14 Identities=29% Similarity=0.233 Sum_probs=11.2
Q ss_pred CCCCHHHHHHHHHH
Q 041031 282 RRPDMSNAAIRLSH 295 (313)
Q Consensus 282 ~Rps~~~ll~~l~~ 295 (313)
-|||.++|+++...
T Consensus 9 pRPs~~lIl~RCs~ 22 (32)
T 1k4u_P 9 PRPSADLILNRCSE 22 (32)
T ss_dssp CCCCHHHHHHSSCH
T ss_pred CCCCHHHHHHHccH
Confidence 49999999987653
No 291
>2fq3_A Transcription regulatory protein SWI3; four-helix bundle; 1.40A {Saccharomyces cerevisiae} SCOP: a.4.1.18
Probab=28.07 E-value=1.3e+02 Score=20.63 Aligned_cols=46 Identities=9% Similarity=0.054 Sum_probs=34.5
Q ss_pred HhhhhcCCCCCCCCHHHHHHHHHHHhhccccCcCCCCCHHHHHHHH
Q 041031 248 KLTECLDPNLTRYHKDSMLQMALLSKDCVDENWKRRPDMSNAAIRL 293 (313)
Q Consensus 248 ~l~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l 293 (313)
.+.+....+......+....+++.|-.++..+|.+..|+.++.+.|
T Consensus 32 ~lPEfF~g~~~~ktpe~Yl~iRN~iI~~yr~nP~~yLT~t~~r~~l 77 (104)
T 2fq3_A 32 SLPEFFTNRIPSKTPEVYMRYRNFMVNSYRLNPNEYFSVTTARRNV 77 (104)
T ss_dssp HCGGGCCSSCTTSCHHHHHHHHHHHHHHHHHCTTSCCCHHHHHHHS
T ss_pred HChHHhcCCCCCCCHHHHHHHHHHHHHHHHhCCceeeeHHHHHHHc
Confidence 3333443332234567778899999999999999999999998876
No 292
>3bpy_A FORK head domain, forkhead transcription factor FOXO4, DNA binding domain; forkhead BOX, winged helix; 1.87A {Homo sapiens}
Probab=27.11 E-value=38 Score=22.24 Aligned_cols=30 Identities=10% Similarity=0.098 Sum_probs=26.3
Q ss_pred HHHHhhccccCcCCCCCHHHHHHHHHHHHh
Q 041031 269 ALLSKDCVDENWKRRPDMSNAAIRLSHILI 298 (313)
Q Consensus 269 ~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 298 (313)
..||..++...|.+|.|+.||.+-+.+-.+
T Consensus 11 ~~LI~~Ai~~sp~~~ltL~eIY~~i~~~fp 40 (85)
T 3bpy_A 11 AELISQAIESAPEKRLTLAQIYEWMVRTVP 40 (85)
T ss_dssp HHHHHHHHHHSTTSCBCHHHHHHHHHHHCG
T ss_pred HHHHHHHHHhCCcCCccHHHHHHHHHHhCc
Confidence 347888888899999999999999998876
No 293
>1kq8_A HFH-1, hepatocyte nuclear factor 3 forkhead homolog 1, winged; winged helix protein, structure, transcription; NMR {Rattus norvegicus} SCOP: a.4.5.14
Probab=24.70 E-value=61 Score=22.02 Aligned_cols=29 Identities=10% Similarity=-0.004 Sum_probs=25.9
Q ss_pred HHHhhccccCcCCCCCHHHHHHHHHHHHh
Q 041031 270 LLSKDCVDENWKRRPDMSNAAIRLSHILI 298 (313)
Q Consensus 270 ~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 298 (313)
.||..++...|.+|.|+.||.+-+.+-.+
T Consensus 9 ~LI~~AI~~sp~~~ltL~eIY~~i~~~fp 37 (100)
T 1kq8_A 9 ALITMAIRDSAGGRLTLAEINEYLMGKFP 37 (100)
T ss_dssp HHHHHHHTTSSSSCBCHHHHHHHHHHHCT
T ss_pred HHHHHHHHhCCCCCCcHHHHHHHHHHhCc
Confidence 47888888999999999999999988776
No 294
>2ybx_A Phosphatidylinositol-5-phosphate 4-kinase type-2; transferase, signalling; HET: PHD; 2.56A {Homo sapiens} PDB: 1bo1_A
Probab=24.60 E-value=84 Score=27.32 Aligned_cols=108 Identities=16% Similarity=0.127 Sum_probs=57.9
Q ss_pred ccCCeEEEEEeEECCcceEEEeccccccHHHHHHHHHHHhc----CC--CceeeeeEEE----eCCeEEEEEeecCCCCh
Q 041031 21 GQGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV----HS--NLIELIGYAA----GGDSLFLVYEYAQNGAL 90 (313)
Q Consensus 21 g~g~~g~v~~~~~~~~~~aiK~~~~~~~~~~~~e~~~l~~l----h~--~i~~~~~~~~----~~~~~~lv~e~~~~~~L 90 (313)
+.||-|..+...-...++.||.+...+.+.+.+-+.-+-.. || -+++++|.+. .....++||+.+=...+
T Consensus 114 ~s~GKSGs~F~~T~D~rfiIKti~~~E~~~l~~~lp~Y~~~~~~~~~~TLL~k~~Gly~v~~~~~~~~fvVM~Nlf~~~~ 193 (394)
T 2ybx_A 114 DSQARSGARFHTSYDKRYIIKTITSEDVAEMHNILKKYHQYIVECHGITLLPQFLGMYRLNVDGVEIYVIVTRNVFSHRL 193 (394)
T ss_dssp C-----CCCEEECTTSSEEEEEECHHHHHHHHHHHHHHHHHHHHTTTCCSSCCEEEEEEEEETTEEEEEEEEECSSCSSS
T ss_pred CCCCCccCEEEEeCCCcEEEEeeCHHHHHHHHHHHHHHHHHHHhcCCCcChhhhcEEEEEEECCeEEEEEEEecCCCCCc
Confidence 33443333333444778999999977655554433222211 33 3678888763 22356789996533221
Q ss_pred --hhh--hcC---CCC---------------------CCCCCccHHHHHHHHHHHHHHHHHHhcCC
Q 041031 91 --SDH--LHW---PSV---------------------KGKKPLAWTTRVQIALDAAKGLEYIHQYT 128 (313)
Q Consensus 91 --~~~--l~~---~~~---------------------~~~~~l~~~~~~~~~~~i~~~l~~lh~~~ 128 (313)
... |+. .+. ...-.+.......+..|+-.=..+|.+.+
T Consensus 194 ~i~~~yDLKGS~~~R~~~~~~~~~~~~~LkD~df~~~~~~i~l~~~~k~~l~~qL~~D~~FL~~~~ 259 (394)
T 2ybx_A 194 SVYRKYDLKGSTVAREASDKEKAKELPTLKDNDFINEGQKIYIDDNNKKVFLEKLKKDVEFLAQLK 259 (394)
T ss_dssp CCSEEEEECCSSSCCCCCHHHHTSSSCEECHHHHHHTTCCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ceeeeeeecccccCCccCccccccCcceecccchHhcCCeEEECHHHHHHHHHHHHHHHHHHHHCC
Confidence 110 000 000 01123455667788889999999999988
No 295
>1vtn_C HNF-3/FORK head DNA-recognition motif; protein-DNA complex, double helix, transcription-DNA complex; HET: DNA; 2.50A {Homo sapiens} PDB: 1d5v_A
Probab=21.90 E-value=63 Score=22.03 Aligned_cols=30 Identities=7% Similarity=-0.016 Sum_probs=25.9
Q ss_pred HHHHhhccccCcCCCCCHHHHHHHHHHHHh
Q 041031 269 ALLSKDCVDENWKRRPDMSNAAIRLSHILI 298 (313)
Q Consensus 269 ~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 298 (313)
..||...+...|.+|.|+.||.+-+.+..+
T Consensus 9 ~~LI~~AI~~sp~~~LtL~eIY~~I~~~fp 38 (102)
T 1vtn_C 9 ISLITMAIQQAPGKMLTLSEIYQWIMDLFP 38 (102)
T ss_dssp HHHHHHHHHTSTTSCBCHHHHHHHHHHHCG
T ss_pred HHHHHHHHHhCCCCCCcHHHHHHHHHHcCC
Confidence 347778888899999999999999988776
No 296
>2gk9_A Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphoinositide, structural genomics, structural genomics consortium, SGC, transferase; 2.80A {Homo sapiens}
Probab=20.96 E-value=1.5e+02 Score=25.74 Aligned_cols=65 Identities=17% Similarity=0.179 Sum_probs=37.3
Q ss_pred cCCeEEEEEeEECCcceEEEeccccccHHHHHHHHHHHhc----CC--CceeeeeEEE----eCCeEEEEEeecCC
Q 041031 22 QGSYGSVYLGKLRGKNAAIKQMKNTKSKEFSSELKILCKV----HS--NLIELIGYAA----GGDSLFLVYEYAQN 87 (313)
Q Consensus 22 ~g~~g~v~~~~~~~~~~aiK~~~~~~~~~~~~e~~~l~~l----h~--~i~~~~~~~~----~~~~~~lv~e~~~~ 87 (313)
.||-+. +...-.+.++.||.+...+.+.+.+-+.-+-.. || -+++++|.+. .....++||+.+=.
T Consensus 105 s~GKSG-~F~~T~D~rfiIKti~~~E~~~l~~~lp~Y~~~~~~~~~~TLL~k~~Gly~v~~~~~~~~~vVM~Nlf~ 179 (392)
T 2gk9_A 105 SEGSDG-RFLISYDRTLVIKEVSSEDIADMHSNLSNYHQYIVKCHGNTLLPQFLGMYRVSVDNEDSYMLVMRNMFS 179 (392)
T ss_dssp CC------CCCCTTSSEEEEECCHHHHHHHHHHHHHHHHHHHHTTSCSSSCCEEEEEECCBSSCCCEEEEEECSSC
T ss_pred CCCCcc-eEEEcCCCcEEEEeeCHHHHHHHHHHHHHHHHHHHhhCCCcchhhhceEEEEEECCeEEEEEEEecCCC
Confidence 344333 444445788999999877655554433222211 33 3778888874 34567899997543
No 297
>2hdc_A Protein (transcription factor); structure, dyanamics, genesis, winged helix protein, protein/DNA complex; HET: DNA; NMR {Rattus norvegicus} SCOP: a.4.5.14
Probab=20.65 E-value=67 Score=21.66 Aligned_cols=30 Identities=10% Similarity=0.019 Sum_probs=25.4
Q ss_pred HHHHhhccccCcCCCCCHHHHHHHHHHHHh
Q 041031 269 ALLSKDCVDENWKRRPDMSNAAIRLSHILI 298 (313)
Q Consensus 269 ~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 298 (313)
..||..++...|.+|.|+.||.+-+.+-.+
T Consensus 8 ~~LI~~AI~~sp~~~ltL~eIY~~i~~~fp 37 (97)
T 2hdc_A 8 IALITMAILQSPQKKLTLSGICEFISNRFP 37 (97)
T ss_dssp HHHHHHHHHTCTTTCBCHHHHHHHHHHHCH
T ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHhch
Confidence 347778888899999999999999987665
No 298
>2a07_F Forkhead box protein P2; double-helix, swapping, homodimer, monomer, winged-helix, magnesium, transcription/DNA complex; 1.90A {Homo sapiens} SCOP: a.4.5.14 PDB: 2as5_F 2kiu_A 3qrf_F
Probab=20.32 E-value=71 Score=21.36 Aligned_cols=30 Identities=13% Similarity=0.180 Sum_probs=25.6
Q ss_pred HHHHhhccccCcCCCCCHHHHHHHHHHHHh
Q 041031 269 ALLSKDCVDENWKRRPDMSNAAIRLSHILI 298 (313)
Q Consensus 269 ~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 298 (313)
..||...+...|++|.|++||.+-+.+-.+
T Consensus 9 ~~LI~~AI~~sp~~~ltL~eIY~~i~~~fp 38 (93)
T 2a07_F 9 ATLIRQAIMESSDRQLTLNEIYSWFTRTFA 38 (93)
T ss_dssp HHHHHHHHHHSTTSCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCccHHHHHHHHHHhCC
Confidence 347778888899999999999999988766
No 299
>3l2c_A Forkhead box protein O4; winged helix, transcription-DNA COMP; 1.87A {Homo sapiens} SCOP: a.4.5.14 PDB: 3co6_C*
Probab=20.28 E-value=60 Score=22.50 Aligned_cols=31 Identities=10% Similarity=0.093 Sum_probs=26.8
Q ss_pred HHHHHhhccccCcCCCCCHHHHHHHHHHHHh
Q 041031 268 MALLSKDCVDENWKRRPDMSNAAIRLSHILI 298 (313)
Q Consensus 268 l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 298 (313)
-..||..++...|.+|.|+.||.+-+.+-.+
T Consensus 29 Y~~LI~~AI~~sp~~~LtL~eIY~~I~~~fP 59 (110)
T 3l2c_A 29 YAELISQAIESAPEKRLTLAQIYEWMVRTVP 59 (110)
T ss_dssp HHHHHHHHHHHSTTSCBCHHHHHHHHHHHCG
T ss_pred HHHHHHHHHHhCCccCcCHHHHHHHHHHhCc
Confidence 3457888888999999999999999998876
No 300
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=20.27 E-value=56 Score=32.61 Aligned_cols=25 Identities=24% Similarity=0.321 Sum_probs=22.9
Q ss_pred eccCCCCeeeCCCCcEEEeeccccc
Q 041031 135 RDVKTSNILLDSNFRAKIADFGLVK 159 (313)
Q Consensus 135 ~di~p~nil~~~~~~~~l~dfg~~~ 159 (313)
||=.++||+++.+|.+.=+|||.+-
T Consensus 940 GDRH~~NILid~tG~v~HIDFG~~f 964 (1092)
T 2y3a_A 940 GDRHSDNIMVKKTGQLFHIDFGHIL 964 (1092)
T ss_dssp CCCCTTTEEECTTSCEEECCCSCCS
T ss_pred CCCCCccEEEecCCCEEEEeehhhh
Confidence 5889999999999999999999765
Done!