STRING 9.05 
  AT3G60730 protein (Arabidopsis thaliana) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
AT3G60730
pectinesterase family protein; pectinesterase family protein; FUNCTIONS IN- enzyme inhibitor activity, pectinesterase activity; INVOLVED IN- cell wall modification; LOCATED IN- endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN- flower; CONTAINS InterPro DOMAIN/s- Pectinesterase, active site (InterPro-IPR018040), Pectin lyase fold/virulence factor (InterPro-IPR011050), Pectinesterase, catalytic (InterPro-IPR000070), Pectinesterase inhibitor (InterPro-IPR006501), Pectin lyase fold (InterPro-IPR012334); BEST Arabidopsis thaliana protein match is- pectinesterase family pro [...] (519 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT3G60440
unknown protein; LOCATED IN- chloroplast; EXPRESSED IN- 19 plant structures; EXPRESSED DURING- [...] (291 aa)
       0.921
AT1G48660
auxin-responsive GH3 family protein; auxin-responsive GH3 family protein; FUNCTIONS IN- molecul [...] (573 aa)
       0.823
sks3
sks3 (SKU5 Similar 3); copper ion binding / oxidoreductase; Encodes a protein with two DUF26 do [...] (550 aa)
       0.679
sks15
sks15 (SKU5 Similar 15); copper ion binding / oxidoreductase; SKU5 Similar 15 (sks15); FUNCTION [...] (541 aa)
       0.679
sks4
sks4 (SKU5 Similar 4); copper ion binding / oxidoreductase; SKU5 Similar 4 (sks4); FUNCTIONS IN [...] (541 aa)
       0.675
sks17
sks17 (SKU5 Similar 17); copper ion binding / oxidoreductase; SKU5 Similar 17 (sks17); FUNCTION [...] (546 aa)
       0.657
sks10
sks10 (SKU5 Similar 10); copper ion binding / oxidoreductase; SKU5 Similar 10 (sks10); FUNCTION [...] (547 aa)
       0.625
AT3G04170
germin-like protein, putative; germin-like protein, putative; FUNCTIONS IN- manganese ion bindi [...] (227 aa)
      0.576
AT5G19900
PRLI-interacting factor, putative; PRLI-interacting factor, putative; FUNCTIONS IN- molecular_f [...] (494 aa)
       0.547
AT5G13410
immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein; immunophilin / FKB [...] (256 aa)
       0.547
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes

 Server load: very high (>100%)
Permalink