Query 041032
Match_columns 268
No_of_seqs 141 out of 1168
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 04:32:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041032.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041032hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xg2_A Pectinesterase 1; prote 100.0 6E-79 2E-83 564.4 25.1 268 1-268 6-315 (317)
2 1gq8_A Pectinesterase; hydrola 100.0 1.9E-78 6.3E-83 561.5 26.7 268 1-268 10-319 (319)
3 3uw0_A Pectinesterase; right-h 100.0 3.2E-66 1.1E-70 486.7 23.5 248 1-259 34-364 (364)
4 2nsp_A Pectinesterase A; micha 100.0 3.8E-65 1.3E-69 476.5 20.6 249 1-260 7-341 (342)
5 3grh_A YBHC, acyl-COA thioeste 100.0 2.1E-61 7.1E-66 458.1 21.1 223 1-224 78-416 (422)
6 1ru4_A Pectate lyase, PEL9A; p 98.5 1.1E-06 3.8E-11 83.2 13.2 94 30-131 81-177 (400)
7 1dbg_A Chondroitinase B; beta 98.2 9.7E-06 3.3E-10 78.9 11.3 107 29-147 69-208 (506)
8 1gq8_A Pectinesterase; hydrola 97.0 0.03 1E-06 51.3 16.4 113 57-181 113-243 (319)
9 1xg2_A Pectinesterase 1; prote 96.7 0.076 2.6E-06 48.5 16.5 113 57-181 109-239 (317)
10 2nsp_A Pectinesterase A; micha 96.4 0.022 7.6E-07 52.6 10.9 78 62-147 136-230 (342)
11 2inu_A Insulin fructotransfera 96.4 0.069 2.4E-06 50.4 14.2 107 18-125 59-203 (410)
12 3uw0_A Pectinesterase; right-h 95.9 0.1 3.5E-06 48.5 13.0 83 57-147 155-255 (364)
13 3vmv_A Pectate lyase; polysacc 94.5 0.42 1.4E-05 43.8 12.2 77 13-104 44-140 (326)
14 3zsc_A Pectate trisaccharide-l 94.4 0.4 1.4E-05 44.2 11.8 97 12-125 43-159 (340)
15 3grh_A YBHC, acyl-COA thioeste 93.6 0.79 2.7E-05 43.4 12.4 114 57-181 224-362 (422)
16 2pyg_A Poly(beta-D-mannuronate 93.5 2.8 9.7E-05 37.9 15.8 20 28-47 60-79 (377)
17 1pcl_A Pectate lyase E; lyase 93.3 3.1 0.00011 38.4 15.7 117 13-146 44-194 (355)
18 2qy1_A Pectate lyase II; GAG l 93.2 0.45 1.5E-05 43.5 9.8 81 60-146 87-173 (330)
19 1idk_A Pectin lyase A; signal, 92.0 0.86 2.9E-05 42.2 10.1 67 61-128 126-200 (359)
20 1qcx_A Pectin lyase B; beta-he 92.0 1.6 5.6E-05 40.3 11.9 68 61-129 126-201 (359)
21 1pe9_A Pectate lyase A; parall 91.8 0.76 2.6E-05 42.6 9.5 116 12-146 50-205 (361)
22 2o04_A Pectate lyase, PL; hexa 91.3 1.2 4.2E-05 41.8 10.3 102 28-146 126-244 (399)
23 1pxz_A Major pollen allergen J 89.8 2.2 7.5E-05 39.2 10.5 107 6-125 54-193 (346)
24 1ru4_A Pectate lyase, PEL9A; p 88.2 2 6.8E-05 40.2 9.2 91 87-181 108-206 (400)
25 1vbl_A Pectate lyase 47; PL 47 87.3 3.5 0.00012 38.9 10.3 102 28-146 131-250 (416)
26 1nhc_A Polygalacturonase I; be 85.1 21 0.00073 32.1 14.5 80 60-145 102-194 (336)
27 1air_A Pectate lyase C, PELC; 84.4 5.9 0.0002 36.4 10.1 47 61-108 105-153 (353)
28 3eqn_A Glucan 1,3-beta-glucosi 81.8 29 0.001 35.1 14.5 118 14-134 88-230 (758)
29 1h80_A IOTA-carrageenase; hydr 79.5 37 0.0013 32.2 13.9 110 64-181 139-271 (464)
30 3gq8_A Preneck appendage prote 78.5 54 0.0018 32.3 17.4 77 65-145 142-244 (609)
31 1bhe_A PEHA, polygalacturonase 78.4 12 0.00041 34.2 9.9 66 60-131 153-226 (376)
32 3jur_A EXO-poly-alpha-D-galact 77.0 27 0.00091 33.0 12.1 107 63-180 196-321 (448)
33 1hg8_A Endopolygalacturonase; 75.3 16 0.00053 33.3 9.7 41 60-106 104-148 (349)
34 1czf_A Polygalacturonase II; b 72.9 56 0.0019 29.7 13.2 105 63-180 132-250 (362)
35 1ia5_A Polygalacturonase; glyc 72.1 17 0.00057 32.9 9.0 20 60-79 106-126 (339)
36 1hg8_A Endopolygalacturonase; 71.7 58 0.002 29.4 15.7 116 60-181 129-267 (349)
37 2iq7_A Endopolygalacturonase; 71.6 34 0.0012 30.7 11.0 20 60-79 102-122 (339)
38 2iq7_A Endopolygalacturonase; 68.3 18 0.00062 32.6 8.4 110 64-180 130-254 (339)
39 1ia5_A Polygalacturonase; glyc 68.3 43 0.0015 30.1 10.9 110 64-180 134-258 (339)
40 1k5c_A Endopolygalacturonase; 68.1 66 0.0023 28.9 12.1 36 92-127 158-194 (335)
41 1czf_A Polygalacturonase II; b 62.7 40 0.0014 30.7 9.6 114 61-180 152-279 (362)
42 2uvf_A Exopolygalacturonase; G 62.0 44 0.0015 32.7 10.3 115 60-181 333-490 (608)
43 1nhc_A Polygalacturonase I; be 61.5 33 0.0011 30.8 8.7 114 61-181 126-254 (336)
44 2uvf_A Exopolygalacturonase; G 61.0 72 0.0025 31.1 11.7 34 94-127 422-461 (608)
45 1rmg_A Rgase A, rhamnogalactur 59.9 33 0.0011 31.9 8.7 42 58-105 127-170 (422)
46 1x0c_A Isopullulanase; glycosi 56.1 77 0.0026 30.6 10.8 109 63-182 290-406 (549)
47 3gqn_A Preneck appendage prote 52.0 2E+02 0.0069 29.1 13.2 78 64-145 141-244 (772)
48 1rmg_A Rgase A, rhamnogalactur 48.3 87 0.003 29.0 9.4 46 65-113 158-203 (422)
49 1ogo_X Dextranase; hydrolase, 45.1 1.4E+02 0.0047 29.1 10.6 106 64-181 331-443 (574)
50 3jur_A EXO-poly-alpha-D-galact 32.0 3.2E+02 0.011 25.5 13.4 16 95-110 311-326 (448)
51 1bhe_A PEHA, polygalacturonase 28.5 3.2E+02 0.011 24.4 11.9 107 65-180 182-303 (376)
52 1k5c_A Endopolygalacturonase; 27.7 3.2E+02 0.011 24.2 11.0 104 64-181 104-221 (335)
No 1
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=100.00 E-value=6e-79 Score=564.39 Aligned_cols=268 Identities=49% Similarity=0.846 Sum_probs=252.1
Q ss_pred CCCCCCCcCCC-----------CCCceEEEEEE--------EeeCCCCcEEEEecCCCCeEEEecCCCCCCCCCCCceEE
Q 041032 1 MVPGNGQGRLG-----------SGTGRFSWHSQ--------NNQRSMNNTMFVGDGIDRTIVTGHRNVPDGSTTSSPATF 61 (268)
Q Consensus 1 ~v~~~g~g~~~-----------~~~~~~~I~Ik--------~i~~~k~~i~l~G~~~~~t~I~~~~~~~~g~~t~~saT~ 61 (268)
+|+.+|.|+|+ .+++|++|+|+ .||+.||+|+|+|+++++|+|+++.+..++.+|+.+|||
T Consensus 6 ~V~~dGsg~f~TIq~AI~aap~~~~~~~~I~I~~G~Y~E~V~I~~~k~~Itl~G~g~~~tiI~~~~~~~~g~~t~~satv 85 (317)
T 1xg2_A 6 VVAQDGTGDYQTLAEAVAAAPDKSKTRYVIYVKRGTYKENVEVASNKMNLMIVGDGMYATTITGSLNVVDGSTTFRSATL 85 (317)
T ss_dssp EECTTSCSSBSSHHHHHHHSCSSCSSCEEEEECSEEEECCEEECTTSCSEEEEESCTTTEEEEECCCTTTTCCSGGGCSE
T ss_pred EECCCCCCCcccHHHHHhhcccCCCceEEEEEcCCEEeeeeecCCCCCcEEEEEcCCCCcEEEecccccCCCcccceeEE
Confidence 58899999998 45789999999 778889999999999999999999988888999999999
Q ss_pred EEeCCCEEEEeeEEEecCCCCCCeeEEEEeeCCeeeEEeceeeccCCeEEeCCccEEEEccEEeeeceeEeccceeEEEe
Q 041032 62 GVSGDGFWARDMTFENTAGPQKHEAVALRVSSDLSMFYRCSFKDYQDTLFTLSLRQFYRDCQIYGTIDFIVGDAAAVFQN 141 (268)
Q Consensus 62 ~v~a~~f~a~niti~Nt~g~~~~QAvAl~~~~dr~~f~~c~~~g~QDTL~~~~gr~yf~~c~I~G~vDFIfG~g~a~f~~ 141 (268)
.|.+++|+++||||+|++++.++|||||++.+||++|++|+|+|+|||||++.+||||++|+|+|+||||||+|+|+||+
T Consensus 86 ~v~a~~f~~~~lt~~Nt~g~~~~qAvAl~v~~d~~~f~~c~f~g~QDTLy~~~~r~~~~~c~I~G~vDFIfG~~~avf~~ 165 (317)
T 1xg2_A 86 AAVGQGFILQDICIQNTAGPAKDQAVALRVGADMSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTVDFIFGNAAVVFQK 165 (317)
T ss_dssp EECSTTCEEESCEEEECCCGGGCCCCSEEECCTTEEEESCEEECSTTCEEECSSEEEEESCEEEESSSCEEECCEEEEES
T ss_pred EEECCCEEEEEeEEecccCCccCceEEEEEeCCcEEEEEeEeCccccceeecCccEEEEeeEEEeceeEEcCCceEEEee
Confidence 99999999999999999998889999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeccCCCCceEEEeCCCCCCCCCeeEEEEcCEEeeCCCC---------C--------------CCccCcccCCCCc
Q 041032 142 FDIFVRRPMHDQSNMVTAQGRDNPNENTGISIEGSRIRPAADL---------A--------------ATDLDGIIHPEGW 198 (268)
Q Consensus 142 c~i~~~~~~~~~~~~ItA~~r~~~~~~~G~vf~~c~i~~~~~~---------~--------------~~~~~~~I~p~GW 198 (268)
|+|+++++..++.++||||+|+++.+++||||+||+|++++++ + +|+|+++|+|+||
T Consensus 166 c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~sr~v~~~t~~~~~I~p~GW 245 (317)
T 1xg2_A 166 CQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKEYSRTVVMESYLGGLINPAGW 245 (317)
T ss_dssp CEEEECCCSTTCCEEEEEECCCCTTSCCEEEEESCEEEECTTTGGGTTTSCEEEECCSSTTCEEEEESCEECTTBCTTCS
T ss_pred eEEEEeccCCCCccEEEecCcCCCCCCcEEEEECCEEecCCCccccccceeEEeecccCCCceEEEEecccCCccccccc
Confidence 9999998765678999999999999999999999999988742 1 9999999999999
Q ss_pred cCCCCCCCCcceEEEEEccccCCCCCCCcccCCcccccCCHhhhcCccccccccCCCCCCCCCCccCCCC
Q 041032 199 IEWDGNFALSTLYYAEYLNAGLGAATANRVKWPGFHVLNNPQQAAPFTVTGFIQGDSWIPATGVPFWLGI 268 (268)
Q Consensus 199 ~~w~~~~~~~~~~f~Ey~~~GpGa~~s~R~~w~~~~~l~t~~ea~~yt~~~~~~g~~W~p~~~~p~~~~~ 268 (268)
.+|++..+.++++|+||+|+||||++++||+|+++++|++++||++|+..+||+|++|+|.+++||..+|
T Consensus 246 ~~w~~~~~~~t~~~~Ey~n~GpGa~~~~Rv~w~~~~~l~~~~ea~~~t~~~~i~g~~W~p~~~~~~~~~~ 315 (317)
T 1xg2_A 246 AEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPAKAMPFTVAKLIQGGSWLRSTGVAYVDGL 315 (317)
T ss_dssp CCSSTTTTTTTCEEEEESCBSTTCCCTTSCCCTTEEEECCHHHHGGGSHHHHSCTHHHHGGGCCCCCCSS
T ss_pred ccCCCCCCcCceEEEEEcCCCCCCCcccccccccccccCCHHHHHHhhHHhhcCCCCCcCCCCccccccc
Confidence 9999888889999999999999999999999999877756799999999999999889999999999886
No 2
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=100.00 E-value=1.9e-78 Score=561.54 Aligned_cols=268 Identities=52% Similarity=0.887 Sum_probs=252.0
Q ss_pred CCCCCCCcCCC-----------CCCceEEEEEE--------EeeCCCCcEEEEecCCCCeEEEecCCCCCCCCCCCceEE
Q 041032 1 MVPGNGQGRLG-----------SGTGRFSWHSQ--------NNQRSMNNTMFVGDGIDRTIVTGHRNVPDGSTTSSPATF 61 (268)
Q Consensus 1 ~v~~~g~g~~~-----------~~~~~~~I~Ik--------~i~~~k~~i~l~G~~~~~t~I~~~~~~~~g~~t~~saT~ 61 (268)
+|+.+|.|+|+ .+++|++|+|+ .||+.||+|+|+|+++++|+|+++.+..++.+|+.+|||
T Consensus 10 ~V~~dGsg~f~TIq~AI~aap~~~~~~~~I~I~~G~Y~E~V~I~~~k~~Itl~G~g~~~tiI~~~~~~~~g~~t~~satv 89 (319)
T 1gq8_A 10 VVAADGSGDYKTVSEAVAAAPEDSKTRYVIRIKAGVYRENVDVPKKKKNIMFLGDGRTSTIITASKNVQDGSTTFNSATV 89 (319)
T ss_dssp EECTTSCSSBSSHHHHHHHSCSSCSSCEEEEECSEEEECCEEECTTCCSEEEEESCTTTEEEEECCCTTTTCCTGGGCSE
T ss_pred EECCCCCCCccCHHHHHHhccccCCceEEEEEcCCeEeeeeeccCCCccEEEEEcCCCccEEEecccccCCCCccceEEE
Confidence 58899999998 45789999999 778889999999999999999999988888899999999
Q ss_pred EEeCCCEEEEeeEEEecCCCCCCeeEEEEeeCCeeeEEeceeeccCCeEEeCCccEEEEccEEeeeceeEeccceeEEEe
Q 041032 62 GVSGDGFWARDMTFENTAGPQKHEAVALRVSSDLSMFYRCSFKDYQDTLFTLSLRQFYRDCQIYGTIDFIVGDAAAVFQN 141 (268)
Q Consensus 62 ~v~a~~f~a~niti~Nt~g~~~~QAvAl~~~~dr~~f~~c~~~g~QDTL~~~~gr~yf~~c~I~G~vDFIfG~g~a~f~~ 141 (268)
.|.+++|+++||||+|++++.++|||||++.+||++|++|+|+|+|||||++.+||||++|+|+|+||||||+++++||+
T Consensus 90 ~v~a~~f~~~nlt~~Nt~g~~~~qAvAl~v~~d~~~f~~c~f~g~QDTLy~~~~r~~~~~c~I~G~vDFIfG~~~a~f~~ 169 (319)
T 1gq8_A 90 AAVGAGFLARDITFQNTAGAAKHQAVALRVGSDLSAFYRCDILAYQDSLYVHSNRQFFINCFIAGTVDFIFGNAAVVLQD 169 (319)
T ss_dssp EECSTTCEEEEEEEEECCCGGGCCCCSEEECCTTEEEEEEEEECSTTCEEECSSEEEEESCEEEESSSCEEESCEEEEES
T ss_pred EEECCCEEEEEeEeEccCCCcCCceEEEEecCCcEEEEEeEECccceeeeecCccEEEEecEEEeeeeEEecCCcEEEEe
Confidence 99999999999999999998889999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeccCCCCceEEEeCCCCCCCCCeeEEEEcCEEeeCCCC---------C--------------CCccCcccCCCCc
Q 041032 142 FDIFVRRPMHDQSNMVTAQGRDNPNENTGISIEGSRIRPAADL---------A--------------ATDLDGIIHPEGW 198 (268)
Q Consensus 142 c~i~~~~~~~~~~~~ItA~~r~~~~~~~G~vf~~c~i~~~~~~---------~--------------~~~~~~~I~p~GW 198 (268)
|+|+++++..++.++||||+|+++.+++||||+||+|++++++ + +|+|+++|+|+||
T Consensus 170 c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~sr~v~~~t~~~~~I~p~GW 249 (319)
T 1gq8_A 170 CDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPWKEYSRTVVMQSSITNVINPAGW 249 (319)
T ss_dssp CEEEECCCSTTCCEEEEEECCCSTTCCCEEEEESCEEEECTTTGGGGGGSCEEEECCSSTTCEEEEESCEECTTBCTTCC
T ss_pred eEEEEecCCCCCceEEEeCCCCCCCCCceEEEECCEEecCCCccccccceeEEecccCCCcceEEEEeccCCCccccccc
Confidence 9999998765678999999999999999999999999988742 1 9999999999999
Q ss_pred cCCCCCCCCcceEEEEEccccCCCCCCCcccCCcccccCCHhhhcCccccccccCCCCCCCCCCccCCCC
Q 041032 199 IEWDGNFALSTLYYAEYLNAGLGAATANRVKWPGFHVLNNPQQAAPFTVTGFIQGDSWIPATGVPFWLGI 268 (268)
Q Consensus 199 ~~w~~~~~~~~~~f~Ey~~~GpGa~~s~R~~w~~~~~l~t~~ea~~yt~~~~~~g~~W~p~~~~p~~~~~ 268 (268)
.+|++..+.++++|+||+|+||||++++||+|+++++|++++||++|+..+||+|++|+|.++|||..+|
T Consensus 250 ~~w~~~~~~~t~~y~Ey~n~GpGa~~~~Rv~w~~~~~l~~~~ea~~~t~~~~i~g~~W~p~~~~~~~~~~ 319 (319)
T 1gq8_A 250 FPWDGNFALDTLYYGEYQNTGAGAATSGRVTWKGFKVITSSTEAQGFTPGSFIAGGSWLKATTFPFSLGL 319 (319)
T ss_dssp CCSSTTTTTTTCEEEEESCBSGGGCCTTCCCCTTEEECCCHHHHHTTSHHHHSCGGGTSGGGTSCCCCCC
T ss_pred CcCCCCCCCCeeEEEEEccccCCCCcccccccccccccCCHHHHHhhhHHhhcCCCCCcCCCCccccCCC
Confidence 9999887889999999999999999999999999877756799999999999999889999999999886
No 3
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=100.00 E-value=3.2e-66 Score=486.71 Aligned_cols=248 Identities=25% Similarity=0.380 Sum_probs=205.0
Q ss_pred CCCCC-CCcCCC----------CCCceEEEEEE------EeeCCCCcEEEEecCCCCeEEEecCCCC------CCCCCCC
Q 041032 1 MVPGN-GQGRLG----------SGTGRFSWHSQ------NNQRSMNNTMFVGDGIDRTIVTGHRNVP------DGSTTSS 57 (268)
Q Consensus 1 ~v~~~-g~g~~~----------~~~~~~~I~Ik------~i~~~k~~i~l~G~~~~~t~I~~~~~~~------~g~~t~~ 57 (268)
+|+.+ |.|+|+ .+.+|++|+|+ +|.+.||+|+|+|+++++|+|+++.++. ++.+|++
T Consensus 34 ~V~~~~g~g~f~TIq~Ai~aa~~~~~~~~I~I~~G~Y~E~v~I~k~~itl~G~g~~~TiIt~~~~~~~~~~~g~~~gt~~ 113 (364)
T 3uw0_A 34 VVSTTPQGDEFSSINAALKSAPKDDTPFIIFLKNGVYTERLEVARSHVTLKGENRDGTVIGANTAAGMLNPQGEKWGTSG 113 (364)
T ss_dssp ----------CCCHHHHHHHSCSSSSCEEEEECSEEECCCEEECSTTEEEEESCTTTEEEEECCCTTSBCTTCSBCCTTT
T ss_pred EEcCCCCCCCcccHHHHHhhcccCCCcEEEEEeCCEEEEEEEEcCCeEEEEecCCCCeEEEccccccccccccccccccC
Confidence 58888 999998 44578999999 6777899999999999999999997652 2367899
Q ss_pred ceEEEEeCCCEEEEeeEEEecCC-----------C---CCCeeEEEEe--eCCeeeEEeceeeccCCeEEeC-CccEEEE
Q 041032 58 PATFGVSGDGFWARDMTFENTAG-----------P---QKHEAVALRV--SSDLSMFYRCSFKDYQDTLFTL-SLRQFYR 120 (268)
Q Consensus 58 saT~~v~a~~f~a~niti~Nt~g-----------~---~~~QAvAl~~--~~dr~~f~~c~~~g~QDTL~~~-~gr~yf~ 120 (268)
||||.|.+++|+++||||+|+++ | .++|||||++ .+||++||+|+|+|||||||++ .|||||+
T Consensus 114 saTv~V~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~QDTLy~~~~gr~yf~ 193 (364)
T 3uw0_A 114 SSTVLVNAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGYQDTLYSKTGSRSYFS 193 (364)
T ss_dssp CCSEEECSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECSBSCEEECTTCEEEEE
T ss_pred eeEEEEECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEecccceEeCCCCCEEEE
Confidence 99999999999999999999985 2 3589999999 5999999999999999999999 8999999
Q ss_pred ccEEeeeceeEeccceeEEEeeEEEEeccCC--CCceEEEeCCCCCCCCCeeEEEEcCEEeeCCCC--------------
Q 041032 121 DCQIYGTIDFIVGDAAAVFQNFDIFVRRPMH--DQSNMVTAQGRDNPNENTGISIEGSRIRPAADL-------------- 184 (268)
Q Consensus 121 ~c~I~G~vDFIfG~g~a~f~~c~i~~~~~~~--~~~~~ItA~~r~~~~~~~G~vf~~c~i~~~~~~-------------- 184 (268)
+|||||+||||||+|+|+||+|+|+++++.. .+.|+||||+| ++.+++||||+||+|++++++
T Consensus 194 ~c~I~GtvDFIFG~a~a~f~~c~i~~~~~~~~~~~~g~ITA~~~-~~~~~~G~vf~~c~i~~~~~~~~~~~yLGRPW~~~ 272 (364)
T 3uw0_A 194 DCEISGHVDFIFGSGITVFDNCNIVARDRSDIEPPYGYITAPST-LTTSPYGLIFINSRLTKEPGVPANSFALGRPWHPT 272 (364)
T ss_dssp SCEEEESEEEEEESSEEEEESCEEEECCCSSCSSCCEEEEEECC-CTTCSCCEEEESCEEEECTTCCSSCEEEECCCCCE
T ss_pred cCEEEcCCCEECCcceEEEEeeEEEEeccCcccCCccEEEeCCc-CCCCCcEEEEEeeEEecCCCCccccEEeccccccc
Confidence 9999999999999999999999999986532 34699999986 457889999999999986421
Q ss_pred ---------------C----CCccCcccCCCCccCCCCC-CC-------CcceEEEEEccccCCCCCCCcccCCcccccC
Q 041032 185 ---------------A----ATDLDGIIHPEGWIEWDGN-FA-------LSTLYYAEYLNAGLGAATANRVKWPGFHVLN 237 (268)
Q Consensus 185 ---------------~----~~~~~~~I~p~GW~~w~~~-~~-------~~~~~f~Ey~~~GpGa~~s~R~~w~~~~~l~ 237 (268)
. +|+|++|| +||.+|++. .. .++++|+||+|+||||+++.+. ++|
T Consensus 273 s~~~~g~yadp~a~~rvVf~~s~m~~~I--~GW~~w~~~~~~~~~~~~~~~~~~f~Ey~n~GpGa~~~~~r-----~~l- 344 (364)
T 3uw0_A 273 TTFADGRYADPAAIGQSVFINTTMDDHI--YGWDKMSGKDKQGEKIWFYPQDSRFFEANSQGPGAAINEGR-----RQL- 344 (364)
T ss_dssp EECSSCEEECTTCCCEEEEESCEECTTE--EECCCEEEECTTSCEEEECGGGSEEEEESCBSTTCCCSTTS-----CBC-
T ss_pred cccccccccccCccceEEEEeCCCCcee--ecccccCCCCccCceeeeccCCceEEEEeCCCCCCCcCCce-----eEC-
Confidence 1 89999999 999999853 22 3457899999999999764321 256
Q ss_pred CHhhhcCccccccccCCCCCCC
Q 041032 238 NPQQAAPFTVTGFIQGDSWIPA 259 (268)
Q Consensus 238 t~~ea~~yt~~~~~~g~~W~p~ 259 (268)
+++||++|+.++||+| |+|.
T Consensus 345 s~~ea~~~t~~~~l~g--W~P~ 364 (364)
T 3uw0_A 345 SAEQLKAFTLPMIFPD--WAVH 364 (364)
T ss_dssp CHHHHGGGSHHHHSTT--CCC-
T ss_pred CHHHHhhccHHHhhcC--CCCC
Confidence 9999999999999975 9984
No 4
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=100.00 E-value=3.8e-65 Score=476.51 Aligned_cols=249 Identities=29% Similarity=0.446 Sum_probs=213.3
Q ss_pred CCC--CCCCcCCC----------CCCceEEEEEE------EeeCCCCcEEEEecCCCCeEEEecCCCC------CCCCCC
Q 041032 1 MVP--GNGQGRLG----------SGTGRFSWHSQ------NNQRSMNNTMFVGDGIDRTIVTGHRNVP------DGSTTS 56 (268)
Q Consensus 1 ~v~--~~g~g~~~----------~~~~~~~I~Ik------~i~~~k~~i~l~G~~~~~t~I~~~~~~~------~g~~t~ 56 (268)
||+ .+|.|+|+ .+.+|++|+|+ +|.+.|++|+|+|+++++|+|+++.++. ++.+|+
T Consensus 7 vV~~~~~g~g~f~TIq~Ai~aap~~~~~~~I~I~~G~Y~E~V~I~k~~Itl~G~g~~~tiI~~~~~~~~~~~~g~~~gT~ 86 (342)
T 2nsp_A 7 VVSKSSSDGKTFKTIADAIASAPAGSTPFVILIKNGVYNERLTITRNNLHLKGESRNGAVIAAATAAGTLKSDGSKWGTA 86 (342)
T ss_dssp EECSCSSSCSCBSSHHHHHHTSCSSSSCEEEEECSEEEECCEEECSTTEEEEESCTTTEEEEECCCTTCBCTTSCBCHHH
T ss_pred EEccCCCCCCCcchHHHHHHhcccCCCcEEEEEeCCEEEEEEEEecCeEEEEecCCCCeEEEecccccccccccCccccc
Confidence 578 89999997 44489999999 7777889999999999999999987542 235678
Q ss_pred CceEEEEeCCCEEEEeeEEEecCC-----------C---CCCeeEEE--EeeCCeeeEEeceeeccCCeEEeCCccEEEE
Q 041032 57 SPATFGVSGDGFWARDMTFENTAG-----------P---QKHEAVAL--RVSSDLSMFYRCSFKDYQDTLFTLSLRQFYR 120 (268)
Q Consensus 57 ~saT~~v~a~~f~a~niti~Nt~g-----------~---~~~QAvAl--~~~~dr~~f~~c~~~g~QDTL~~~~gr~yf~ 120 (268)
.||||.|.+++|+++||||+|+++ + .++||||| ++++||++|++|+|+|+|||||++.+||||+
T Consensus 87 ~satv~v~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G~QDTLy~~~gr~~~~ 166 (342)
T 2nsp_A 87 GSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQATLYVSGGRSFFS 166 (342)
T ss_dssp HTCSEEECSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEECSTTCEEECSSEEEEE
T ss_pred ceeEEEEECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEecccceEEECCCCEEEE
Confidence 899999999999999999999992 2 36899999 8899999999999999999999999999999
Q ss_pred ccEEeeeceeEeccceeEEEeeEEEEeccCC-C---CceEEEeCCCCCCCCCeeEEEEcCEEeeCCCC------------
Q 041032 121 DCQIYGTIDFIVGDAAAVFQNFDIFVRRPMH-D---QSNMVTAQGRDNPNENTGISIEGSRIRPAADL------------ 184 (268)
Q Consensus 121 ~c~I~G~vDFIfG~g~a~f~~c~i~~~~~~~-~---~~~~ItA~~r~~~~~~~G~vf~~c~i~~~~~~------------ 184 (268)
+|+|+|+||||||+|+|+||+|+|+++++.. + ..++||||++ ++.+++||||++|+|+++++.
T Consensus 167 ~c~I~G~vDFIFG~a~a~f~~c~i~~~~~~~~~~~~~~g~ItA~~~-~~~~~~G~vf~~c~i~~~~~~~~~~~~yLGRpW 245 (342)
T 2nsp_A 167 DCRISGTVDFIFGDGTALFNNCDLVSRYRADVKSGNVSGYLTAPST-NINQKYGLVITNSRVIRESDSVPAKSYGLGRPW 245 (342)
T ss_dssp SCEEEESEEEEEESSEEEEESCEEEECCCTTSCTTSCCEEEEEECC-BTTCSCCEEEESCEEEESSTTSCTTCEEEECCC
T ss_pred cCEEEeceEEEeCCceEEEecCEEEEecCcccccccCceEEEccCC-CCCCCCEEEEEcCEEecCCCCCccccEEEEecc
Confidence 9999999999999999999999999986522 1 1389999975 568899999999999987431
Q ss_pred ------------------C----CCccCcccCCCCccCCCCC--------CCCcceEEEEEccccCCCCCCCcccCCccc
Q 041032 185 ------------------A----ATDLDGIIHPEGWIEWDGN--------FALSTLYYAEYLNAGLGAATANRVKWPGFH 234 (268)
Q Consensus 185 ------------------~----~~~~~~~I~p~GW~~w~~~--------~~~~~~~f~Ey~~~GpGa~~s~R~~w~~~~ 234 (268)
. +|+|+++|+ ||.+|++. ...++++|+||+|+||||+++ +|. +
T Consensus 246 ~~~s~~~~~~~a~p~~~~r~vf~~t~~~~~I~--GW~~w~~~~~~~~~~~~~~~~~~f~EY~n~GpGa~~~---~~~--~ 318 (342)
T 2nsp_A 246 HPTTTFSDGRYADPNAIGQTVFLNTSMDNHIY--GWDKMSGKDKNGNTIWFNPEDSRFFEYKSYGAGATVS---KDR--R 318 (342)
T ss_dssp CCEEEETTEEEECTTBCCEEEEESCEECTTEE--ECCCEEEECTTSCEEEECGGGSEEEEESCBSTTCCCS---TTS--C
T ss_pred ccccccccccccCCccceeEEEEccccCcccc--cccccCCCCccCceeecccCccEEEEEecccCCCCCC---CCc--e
Confidence 0 799999998 99999853 223578999999999999864 222 3
Q ss_pred ccCCHhhhcCccccccccCCCCCCCC
Q 041032 235 VLNNPQQAAPFTVTGFIQGDSWIPAT 260 (268)
Q Consensus 235 ~l~t~~ea~~yt~~~~~~g~~W~p~~ 260 (268)
+| +++||++|+..+||+| |+|..
T Consensus 319 ~l-~~~ea~~~t~~~~i~~--W~p~~ 341 (342)
T 2nsp_A 319 QL-TDAQAAEYTQSKVLGD--WTPTL 341 (342)
T ss_dssp BC-CHHHHGGGSHHHHHTT--CCCCC
T ss_pred EC-CHHHHHhhhHHhhhcc--CCCCC
Confidence 56 9999999999999975 99853
No 5
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=100.00 E-value=2.1e-61 Score=458.08 Aligned_cols=223 Identities=22% Similarity=0.228 Sum_probs=189.5
Q ss_pred CCCCCCCc--CCC------------CCCceEEEEEE--------EeeCCCCcEEEEecCCCCeEEEe--cCC--------
Q 041032 1 MVPGNGQG--RLG------------SGTGRFSWHSQ--------NNQRSMNNTMFVGDGIDRTIVTG--HRN-------- 48 (268)
Q Consensus 1 ~v~~~g~g--~~~------------~~~~~~~I~Ik--------~i~~~k~~i~l~G~~~~~t~I~~--~~~-------- 48 (268)
||+.+|.| +|+ ++++|++|+|| .||+.|++|+|+|+|+++|+|+. +.+
T Consensus 78 vVa~dGsG~~~f~TIqeAVdaap~~~~~~r~vI~Ik~GvY~E~V~Ip~~K~~ItL~G~G~~~t~Iti~~~~~~~~~~~d~ 157 (422)
T 3grh_A 78 VVGPAGTQGVTHTTIQAAVDAAIIKRTNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPADW 157 (422)
T ss_dssp EECSTTCTTCCBSSHHHHHHHHHTTCCSSCEEEEECSEEEESCEEECCCSSCEEEEECSSSGGGEEEEECCCTTSCHHHH
T ss_pred EEeCCCCCCcCcCCHHHHHHhchhcCCCccEEEEEeCCeEeeeEEecCCCCcEEEEeccCCCceEEEeeccccccccccc
Confidence 58899998 887 35779999999 88889999999999999766543 210
Q ss_pred --------------------------CCCCCCCCCceEEEEeCCCEEEEeeEEEecCCC----CCCeeEEEEeeCCeeeE
Q 041032 49 --------------------------VPDGSTTSSPATFGVSGDGFWARDMTFENTAGP----QKHEAVALRVSSDLSMF 98 (268)
Q Consensus 49 --------------------------~~~g~~t~~saT~~v~a~~f~a~niti~Nt~g~----~~~QAvAl~~~~dr~~f 98 (268)
.....+|++||||.|++++|+|+||||+|++|+ .++|||||++.+||++|
T Consensus 158 ~~~~n~~G~~~~G~~aw~tf~~~~~~~sat~gT~~SAT~~V~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~v~gDr~~f 237 (422)
T 3grh_A 158 RHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDQVQI 237 (422)
T ss_dssp HHHHCGGGSSCTTSTTHHHHHHHHTCCSSSCCGGGCCSEEECCTTCEEEEEEEEETTGGGSCSSCCCCCSEEECCSSEEE
T ss_pred ccccccccccccCccccccccccccccccceeccceEEEEEECCCEEEEeeEEEeCCCCCCCCCCCceEEEEecCCcEEE
Confidence 011346789999999999999999999999986 46899999999999999
Q ss_pred EeceeeccCCeEEe------------CCccEEEEccEEeeeceeEeccceeEEEeeEEEEeccCCCCceEEEeCCCCCCC
Q 041032 99 YRCSFKDYQDTLFT------------LSLRQFYRDCQIYGTIDFIVGDAAAVFQNFDIFVRRPMHDQSNMVTAQGRDNPN 166 (268)
Q Consensus 99 ~~c~~~g~QDTL~~------------~~gr~yf~~c~I~G~vDFIfG~g~a~f~~c~i~~~~~~~~~~~~ItA~~r~~~~ 166 (268)
|+|+|+|||||||+ +.|||||++|||||+||||||+|+||||+|+|+++++...+.++|||++ +++.
T Consensus 238 y~C~f~G~QDTLy~~~~~~~~~~~~d~~gRqyy~~CyIeGtVDFIFG~a~AvFe~C~I~s~~~~~~~~g~ITA~~-t~~~ 316 (422)
T 3grh_A 238 NNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVFAPA-TLSN 316 (422)
T ss_dssp EEEEEECSTTCEEECCCCTTCSCCSSCCCEEEEESCEEEESEEEEEESSEEEEESCEEEECCSSCSSCCEEEEEC-CBTT
T ss_pred EeeEEEeecceeeeccccccccccccccccEEEEecEEeccccEEccCceEEEEeeEEEEecCCCCCceEEEecC-CCCC
Confidence 99999999999998 4699999999999999999999999999999999976544579999985 5678
Q ss_pred CCeeEEEEcCEEeeCCCCC--------------------CCccCcccCC-CCccCCCCCC---C----------------
Q 041032 167 ENTGISIEGSRIRPAADLA--------------------ATDLDGIIHP-EGWIEWDGNF---A---------------- 206 (268)
Q Consensus 167 ~~~G~vf~~c~i~~~~~~~--------------------~~~~~~~I~p-~GW~~w~~~~---~---------------- 206 (268)
+++||||++|+|++++... +|+|+++|+| +||.+|.... .
T Consensus 317 ~~~Gfvf~nC~ita~~~~~~yLGRPW~~ysrt~~qVVf~~s~l~~~I~p~~GW~~m~~s~r~f~~~~~~~~~~~~~~r~l 396 (422)
T 3grh_A 317 IYYGFLAVNSRFNAFGDGVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAGNTGSVDDNDEIQRNL 396 (422)
T ss_dssp CCCCEEEESCEEEECSSSCBEEEEEECCSTTBCCEEEEESCEECTTBCSSCCEEEEETTCCCCCCCCCEEETTTEEECCT
T ss_pred CCCEEEEECCEEEeCCCCCEEcCCCCCCcCCcCccEEEEeCcccCccCCCCCchhhhccCCCcccccccccccccccccC
Confidence 8999999999999764321 8999999998 9999995321 1
Q ss_pred --CcceEEEEEccccCCCCC
Q 041032 207 --LSTLYYAEYLNAGLGAAT 224 (268)
Q Consensus 207 --~~~~~f~Ey~~~GpGa~~ 224 (268)
....||+||+|+|||+-.
T Consensus 397 ~~~~~nR~~ey~n~g~g~~~ 416 (422)
T 3grh_A 397 NDTNYNRMWEYNNRGVGSKV 416 (422)
T ss_dssp TCTTSCEEEEESCBSGGGC-
T ss_pred CCcchhheeEecccCCCccc
Confidence 135789999999999853
No 6
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=98.50 E-value=1.1e-06 Score=83.25 Aligned_cols=94 Identities=15% Similarity=0.174 Sum_probs=73.0
Q ss_pred cEEEEecCCCCeEEEecCCCCCCCCCCCceEEEEeCCCEEEEeeEEEecCCCCCCeeEEEEeeCCeeeEEeceeeccCCe
Q 041032 30 NTMFVGDGIDRTIVTGHRNVPDGSTTSSPATFGVSGDGFWARDMTFENTAGPQKHEAVALRVSSDLSMFYRCSFKDYQDT 109 (268)
Q Consensus 30 ~i~l~G~~~~~t~I~~~~~~~~g~~t~~saT~~v~a~~f~a~niti~Nt~g~~~~QAvAl~~~~dr~~f~~c~~~g~QDT 109 (268)
+|+|.|++.++++|. .. ...+.....+..|.|.++++++++|+|+|+.. + +|++.+++..+++|+|.+.|||
T Consensus 81 pIti~~~~g~~~vI~-~~-~~~g~~~~~~~~i~i~~~~~~i~gl~I~n~g~----~--GI~v~gs~~~i~n~~i~~n~~~ 152 (400)
T 1ru4_A 81 PIYVAAANCGRAVFD-FS-FPDSQWVQASYGFYVTGDYWYFKGVEVTRAGY----Q--GAYVIGSHNTFENTAFHHNRNT 152 (400)
T ss_dssp CEEEEEGGGCCEEEE-CC-CCTTCCCTTCCSEEECSSCEEEESEEEESCSS----C--SEEECSSSCEEESCEEESCSSC
T ss_pred CEEEEEecCCCCEEe-CC-ccCCccccceeEEEEECCeEEEEeEEEEeCCC----C--cEEEeCCCcEEEeEEEECCCce
Confidence 399999998899998 32 11111111135689999999999999999853 2 6788899999999999999997
Q ss_pred -EEeCCc--cEEEEccEEeeeceeE
Q 041032 110 -LFTLSL--RQFYRDCQIYGTIDFI 131 (268)
Q Consensus 110 -L~~~~g--r~yf~~c~I~G~vDFI 131 (268)
|+...+ ...+.+|.|.++.|..
T Consensus 153 GI~l~~~~s~n~I~nn~i~~N~d~~ 177 (400)
T 1ru4_A 153 GLEINNGGSYNTVINSDAYRNYDPK 177 (400)
T ss_dssp SEEECTTCCSCEEESCEEECCCCTT
T ss_pred eEEEEcccCCeEEEceEEEcccCcc
Confidence 777653 5689999999988754
No 7
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=98.16 E-value=9.7e-06 Score=78.95 Aligned_cols=107 Identities=12% Similarity=0.184 Sum_probs=76.4
Q ss_pred CcEEEEecCCCCeEEEecCCCCCCCCCCCceEEEEeCCCEEEEeeEEEecCCCCC----CeeEEEEeeCCeeeEEeceee
Q 041032 29 NNTMFVGDGIDRTIVTGHRNVPDGSTTSSPATFGVSGDGFWARDMTFENTAGPQK----HEAVALRVSSDLSMFYRCSFK 104 (268)
Q Consensus 29 ~~i~l~G~~~~~t~I~~~~~~~~g~~t~~saT~~v~a~~f~a~niti~Nt~g~~~----~QAvAl~~~~dr~~f~~c~~~ 104 (268)
.+|+|.|+...+++|.+. .+|.|.++++++++|+|+|...... ....++.+.|+++.+.+|+|.
T Consensus 69 ~pItl~~~~~~~~vi~G~------------~~l~i~g~~v~i~GL~i~~~~~~~~~~~~~~~~~iav~G~~~~I~nn~I~ 136 (506)
T 1dbg_A 69 LPITIKALNPGKVFFTGD------------AKVELRGEHLILEGIWFKDGNRAIQAWKSHGPGLVAIYGSYNRITACVFD 136 (506)
T ss_dssp BCEEEEESSTTSEEEEES------------CEEEECSSSEEEESCEEEEECCCTTTCCTTSCCSEEECSSSCEEESCEEE
T ss_pred CCEEEECCCCCccEEeCC------------ceEEEEcCCEEEECeEEECCCcceeeeecccccceEEecCCeEEEeeEEE
Confidence 347777776666776642 4799999999999999999875211 112345556899999999999
Q ss_pred ccCCe--EEeC--------C-ccEEEEccEEeeecee---E--------ecc-------ceeEEEeeEEEEe
Q 041032 105 DYQDT--LFTL--------S-LRQFYRDCQIYGTIDF---I--------VGD-------AAAVFQNFDIFVR 147 (268)
Q Consensus 105 g~QDT--L~~~--------~-gr~yf~~c~I~G~vDF---I--------fG~-------g~a~f~~c~i~~~ 147 (268)
++|++ ++.. . .+..+.+|+|+|..|. + ++. ...++++|.|..+
T Consensus 137 ~~~~gd~i~i~~~~~~~~l~g~~n~I~~N~I~Gk~~~G~~i~gnngI~l~~~~~~~~~~~~~~I~nN~f~~~ 208 (506)
T 1dbg_A 137 CFDEANSAYITTSLTEDGKVPQHCRIDHCSFTDKITFDQVINLNNTARAIKDGSVGGPGMYHRVDHCFFSNP 208 (506)
T ss_dssp SCCSSCSCSEEECCCTTCCCCCSCEEESCEEECCCSSSCSEEECSSCCCSCCCSCCCCCCCCEEESCEEEEC
T ss_pred cCCCCceeeEeecccceeeeccccEEECcEEECCcCcceEEecCceeEeccCcccccccCCeEEeCcEEccc
Confidence 99998 6653 3 3569999999996542 2 121 2467788877764
No 8
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=97.00 E-value=0.03 Score=51.29 Aligned_cols=113 Identities=18% Similarity=0.193 Sum_probs=81.7
Q ss_pred CceEEEEeCCCEEEEeeEEEecCCCCCCeeEEEEeeCCeeeEEeceeeccCCeEEeCCccEEEEccEEeee------cee
Q 041032 57 SPATFGVSGDGFWARDMTFENTAGPQKHEAVALRVSSDLSMFYRCSFKDYQDTLFTLSLRQFYRDCQIYGT------IDF 130 (268)
Q Consensus 57 ~saT~~v~a~~f~a~niti~Nt~g~~~~QAvAl~~~~dr~~f~~c~~~g~QDTL~~~~gr~yf~~c~I~G~------vDF 130 (268)
...-|.|.++...++|..|... | -.|++++.|..|++|.|.|--|-+|-+ +..+|++|.|.-. -.+
T Consensus 113 qAvAl~v~~d~~~f~~c~f~g~------Q-DTLy~~~~r~~~~~c~I~G~vDFIfG~-~~a~f~~c~i~~~~~~~~~~~~ 184 (319)
T 1gq8_A 113 QAVALRVGSDLSAFYRCDILAY------Q-DSLYVHSNRQFFINCFIAGTVDFIFGN-AAVVLQDCDIHARRPGSGQKNM 184 (319)
T ss_dssp CCCSEEECCTTEEEEEEEEECS------T-TCEEECSSEEEEESCEEEESSSCEEES-CEEEEESCEEEECCCSTTCCEE
T ss_pred ceEEEEecCCcEEEEEeEECcc------c-eeeeecCccEEEEecEEEeeeeEEecC-CcEEEEeeEEEEecCCCCCceE
Confidence 4566788999999999999643 4 368888899999999999999999964 8899999999753 356
Q ss_pred Eeccc--------eeEEEeeEEEEeccCCC----CceEEEeCCCCCCCCCeeEEEEcCEEeeC
Q 041032 131 IVGDA--------AAVFQNFDIFVRRPMHD----QSNMVTAQGRDNPNENTGISIEGSRIRPA 181 (268)
Q Consensus 131 IfG~g--------~a~f~~c~i~~~~~~~~----~~~~ItA~~r~~~~~~~G~vf~~c~i~~~ 181 (268)
|.=.+ --+|++|+|........ ..-|+ +|.= ....-.||.+|.+...
T Consensus 185 itA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yL---GRpW-~~~sr~v~~~t~~~~~ 243 (319)
T 1gq8_A 185 VTAQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYL---GRPW-KEYSRTVVMQSSITNV 243 (319)
T ss_dssp EEEECCCSTTCCCEEEEESCEEEECTTTGGGGGGSCEEE---ECCS-STTCEEEEESCEECTT
T ss_pred EEeCCCCCCCCCceEEEECCEEecCCCccccccceeEEe---cccC-CCcceEEEEeccCCCc
Confidence 66433 24799999986432100 02233 4421 2244689999998753
No 9
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=96.70 E-value=0.076 Score=48.49 Aligned_cols=113 Identities=12% Similarity=0.172 Sum_probs=81.8
Q ss_pred CceEEEEeCCCEEEEeeEEEecCCCCCCeeEEEEeeCCeeeEEeceeeccCCeEEeCCccEEEEccEEeee------cee
Q 041032 57 SPATFGVSGDGFWARDMTFENTAGPQKHEAVALRVSSDLSMFYRCSFKDYQDTLFTLSLRQFYRDCQIYGT------IDF 130 (268)
Q Consensus 57 ~saT~~v~a~~f~a~niti~Nt~g~~~~QAvAl~~~~dr~~f~~c~~~g~QDTL~~~~gr~yf~~c~I~G~------vDF 130 (268)
...-|.|.++...++|..|... | -.|++++.|..|++|.|.|-=|-+|-+ ++.+|++|.|.-. -.+
T Consensus 109 qAvAl~v~~d~~~f~~c~f~g~------Q-DTLy~~~~r~~~~~c~I~G~vDFIfG~-~~avf~~c~i~~~~~~~~~~~~ 180 (317)
T 1xg2_A 109 QAVALRVGADMSVINRCRIDAY------Q-DTLYAHSQRQFYRDSYVTGTVDFIFGN-AAVVFQKCQLVARKPGKYQQNM 180 (317)
T ss_dssp CCCSEEECCTTEEEESCEEECS------T-TCEEECSSEEEEESCEEEESSSCEEEC-CEEEEESCEEEECCCSTTCCEE
T ss_pred ceEEEEEeCCcEEEEEeEeCcc------c-cceeecCccEEEEeeEEEeceeEEcCC-ceEEEeeeEEEEeccCCCCccE
Confidence 4556788999999999999643 4 368888899999999999999999965 7899999999753 356
Q ss_pred Eeccc--------eeEEEeeEEEEeccCC---C-CceEEEeCCCCCCCCCeeEEEEcCEEeeC
Q 041032 131 IVGDA--------AAVFQNFDIFVRRPMH---D-QSNMVTAQGRDNPNENTGISIEGSRIRPA 181 (268)
Q Consensus 131 IfG~g--------~a~f~~c~i~~~~~~~---~-~~~~ItA~~r~~~~~~~G~vf~~c~i~~~ 181 (268)
|.=.+ --+|++|+|....... . ..-|+ +|.= ....-.||.+|.+...
T Consensus 181 itA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yL---GRpW-~~~sr~v~~~t~~~~~ 239 (317)
T 1xg2_A 181 VTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYL---GRPW-KEYSRTVVMESYLGGL 239 (317)
T ss_dssp EEEECCCCTTSCCEEEEESCEEEECTTTGGGTTTSCEEE---ECCS-STTCEEEEESCEECTT
T ss_pred EEecCcCCCCCCcEEEEECCEEecCCCccccccceeEEe---eccc-CCCceEEEEecccCCc
Confidence 66332 2579999998643210 0 02233 4421 2234689999998753
No 10
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=96.39 E-value=0.022 Score=52.59 Aligned_cols=78 Identities=19% Similarity=0.367 Sum_probs=63.3
Q ss_pred EEeCCCEEEEeeEEEecCCCCCCeeEEEEeeCCeeeEEeceeeccCCeEEeCCccEEEEccEEeeec----------eeE
Q 041032 62 GVSGDGFWARDMTFENTAGPQKHEAVALRVSSDLSMFYRCSFKDYQDTLFTLSLRQFYRDCQIYGTI----------DFI 131 (268)
Q Consensus 62 ~v~a~~f~a~niti~Nt~g~~~~QAvAl~~~~dr~~f~~c~~~g~QDTL~~~~gr~yf~~c~I~G~v----------DFI 131 (268)
.+.++...++|..|.- .| -.|++++.|..|++|.|.|-=|-+|-+ ++.+|++|.|.-.- -+|
T Consensus 136 ~v~~d~~~f~~c~f~G------~Q-DTLy~~~gr~~~~~c~I~G~vDFIFG~-a~a~f~~c~i~~~~~~~~~~~~~~g~I 207 (342)
T 2nsp_A 136 TKSGDRAYFKDVSLVG------YQ-ATLYVSGGRSFFSDCRISGTVDFIFGD-GTALFNNCDLVSRYRADVKSGNVSGYL 207 (342)
T ss_dssp CTTCBSEEEEEEEEEC------ST-TCEEECSSEEEEESCEEEESEEEEEES-SEEEEESCEEEECCCTTSCTTSCCEEE
T ss_pred eeccCcEEEEeeEEec------cc-ceEEECCCCEEEEcCEEEeceEEEeCC-ceEEEecCEEEEecCcccccccCceEE
Confidence 6789999999999964 35 368999999999999999999999976 78999999997431 477
Q ss_pred eccce-------eEEEeeEEEEe
Q 041032 132 VGDAA-------AVFQNFDIFVR 147 (268)
Q Consensus 132 fG~g~-------a~f~~c~i~~~ 147 (268)
.=.++ -+|.+|+|...
T Consensus 208 tA~~~~~~~~~G~vf~~c~i~~~ 230 (342)
T 2nsp_A 208 TAPSTNINQKYGLVITNSRVIRE 230 (342)
T ss_dssp EEECCBTTCSCCEEEESCEEEES
T ss_pred EccCCCCCCCCEEEEEcCEEecC
Confidence 64322 48999999864
No 11
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=96.37 E-value=0.069 Score=50.43 Aligned_cols=107 Identities=15% Similarity=0.143 Sum_probs=72.6
Q ss_pred EEEEE--------EeeCCCCcEEEEecCCCCeE---EEecCCCCC-----CCC--------CCCceEEEEeC------CC
Q 041032 18 SWHSQ--------NNQRSMNNTMFVGDGIDRTI---VTGHRNVPD-----GST--------TSSPATFGVSG------DG 67 (268)
Q Consensus 18 ~I~Ik--------~i~~~k~~i~l~G~~~~~t~---I~~~~~~~~-----g~~--------t~~saT~~v~a------~~ 67 (268)
+|+|. .|.++||+|+|.|++. .++ |.++..... +.+ -..-+.|.|++ ++
T Consensus 59 vI~L~~G~Y~l~g~ivIdkp~LtL~G~~~-g~~s~~Id~~~~~~g~~~~~g~Gs~I~V~a~~~~g~a~~V~~~g~~r~s~ 137 (410)
T 2inu_A 59 AIIIPPGDYDLHTQVVVDVSYLTIAGFGH-GFFSRSILDNSNPTGWQNLQPGASHIRVLTSPSAPQAFLVKRAGDPRLSG 137 (410)
T ss_dssp EEECCSEEEEECSCEEECCTTEEEECSCC-CCCCHHHHHTSCCTTCSCCSCCSEEEEECCCTTSCEEEEECCCSSSCEEC
T ss_pred EEEECCCeeccCCcEEEecCcEEEEecCC-CcceeEEecccccCcccccCCCCcEEEEeccccccceeEEeeccCcccCC
Confidence 56666 4788999999999874 333 553322211 000 12456677777 77
Q ss_pred EEEEeeEEEecC----C-CCCCeeEEEEee--CCeeeEEeceeeccCCeEEeCCccE-EEEccEEe
Q 041032 68 FWARDMTFENTA----G-PQKHEAVALRVS--SDLSMFYRCSFKDYQDTLFTLSLRQ-FYRDCQIY 125 (268)
Q Consensus 68 f~a~niti~Nt~----g-~~~~QAvAl~~~--~dr~~f~~c~~~g~QDTL~~~~gr~-yf~~c~I~ 125 (268)
+++++++|++.. | ....+-.++++. +|++.+.+|+|.+-.==+++++... -.+++.|+
T Consensus 138 V~~~~v~I~G~~~~~~G~s~~~~dAGI~v~~~~d~~~I~nn~i~~~~fGI~l~~a~~~~I~~N~I~ 203 (410)
T 2inu_A 138 IVFRDFCLDGVGFTPGKNSYHNGKTGIEVASDNDSFHITGMGFVYLEHALIVRGADALRVNDNMIA 203 (410)
T ss_dssp CEEESCEEECCCCSSSTTSCCCSCEEEEECSCEESCEEESCEEESCSEEEEETTEESCEEESCEEE
T ss_pred cEECCEEEECCEeecCCCCcccCceeEEEeccCCeEEEECCEEecccEEEEEccCCCcEEECCEEE
Confidence 888888888773 2 223455777775 8999999999999988888886543 66777777
No 12
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=95.93 E-value=0.1 Score=48.54 Aligned_cols=83 Identities=16% Similarity=0.254 Sum_probs=65.7
Q ss_pred CceEEEE--eCCCEEEEeeEEEecCCCCCCeeEEEEee-CCeeeEEeceeeccCCeEEeCCccEEEEccEEeee------
Q 041032 57 SPATFGV--SGDGFWARDMTFENTAGPQKHEAVALRVS-SDLSMFYRCSFKDYQDTLFTLSLRQFYRDCQIYGT------ 127 (268)
Q Consensus 57 ~saT~~v--~a~~f~a~niti~Nt~g~~~~QAvAl~~~-~dr~~f~~c~~~g~QDTL~~~~gr~yf~~c~I~G~------ 127 (268)
...-|.| .++...++|..|. +.| -.|+++ ..|..|++|.|.|-=|=+|-+ ++.+|++|.|.-.
T Consensus 155 QAvAl~v~~~~D~~~f~~C~f~------G~Q-DTLy~~~~gr~yf~~c~I~GtvDFIFG~-a~a~f~~c~i~~~~~~~~~ 226 (364)
T 3uw0_A 155 QAVALLLAENSDKARFKAVKLE------GYQ-DTLYSKTGSRSYFSDCEISGHVDFIFGS-GITVFDNCNIVARDRSDIE 226 (364)
T ss_dssp CCCSEEECTTCEEEEEEEEEEE------CSB-SCEEECTTCEEEEESCEEEESEEEEEES-SEEEEESCEEEECCCSSCS
T ss_pred ccEEEEEecCCCeEEEEeeEEE------ecc-cceEeCCCCCEEEEcCEEEcCCCEECCc-ceEEEEeeEEEEeccCccc
Confidence 4445667 4888999999995 346 678888 899999999999999999984 8999999999742
Q ss_pred --ceeEeccce-------eEEEeeEEEEe
Q 041032 128 --IDFIVGDAA-------AVFQNFDIFVR 147 (268)
Q Consensus 128 --vDFIfG~g~-------a~f~~c~i~~~ 147 (268)
--+|.=.++ -+|++|+|...
T Consensus 227 ~~~g~ITA~~~~~~~~~G~vf~~c~i~~~ 255 (364)
T 3uw0_A 227 PPYGYITAPSTLTTSPYGLIFINSRLTKE 255 (364)
T ss_dssp SCCEEEEEECCCTTCSCCEEEESCEEEEC
T ss_pred CCccEEEeCCcCCCCCcEEEEEeeEEecC
Confidence 357764322 47999999864
No 13
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=94.54 E-value=0.42 Score=43.75 Aligned_cols=77 Identities=9% Similarity=0.132 Sum_probs=51.7
Q ss_pred CCceEEEEEE-EeeCC---------C---------CcEEEEecCCCCeEEEecCCCCCCCCCCCceEEEE-eCCCEEEEe
Q 041032 13 GTGRFSWHSQ-NNQRS---------M---------NNTMFVGDGIDRTIVTGHRNVPDGSTTSSPATFGV-SGDGFWARD 72 (268)
Q Consensus 13 ~~~~~~I~Ik-~i~~~---------k---------~~i~l~G~~~~~t~I~~~~~~~~g~~t~~saT~~v-~a~~f~a~n 72 (268)
.+++.+|.|. .|... + +++||+|.+..-+ |.+ +-|.| .++++.++|
T Consensus 44 ~~~p~iI~V~G~I~l~~~~~~~i~v~~~~~~~~~~sn~TI~G~g~~~~-i~G-------------~gl~i~~a~NVIIrN 109 (326)
T 3vmv_A 44 PDEPLTIYVNGTITQGNSPQSLIDVKNHRGKAHEIKNISIIGVGTNGE-FDG-------------IGIRLSNAHNIIIQN 109 (326)
T ss_dssp TTSCEEEEECSEEESTTCSSSSEEESCTTCTTSCEEEEEEEECTTCCE-EES-------------CCEEEESEEEEEEES
T ss_pred CCCCEEEEEeeEEecCCCCCceEEEecccccccCCCCeEEEecCCCeE-EeC-------------cEEEEEecceEEEEC
Confidence 4567888888 44322 2 7888888875433 322 12445 688999999
Q ss_pred eEEEecCCCCCCeeEEEEeeCCeeeEEeceee
Q 041032 73 MTFENTAGPQKHEAVALRVSSDLSMFYRCSFK 104 (268)
Q Consensus 73 iti~Nt~g~~~~QAvAl~~~~dr~~f~~c~~~ 104 (268)
|.|++... .+.-|+-+.-.++++-+.+|.|.
T Consensus 110 l~i~~~~~-~~~DaI~i~~~s~nVWIDH~s~s 140 (326)
T 3vmv_A 110 VSIHHVRE-GEGTAIEVTDDSKNVWIDHNEFY 140 (326)
T ss_dssp CEEECCCS-TTSCSEEEETTCEEEEEESCEEE
T ss_pred eEEEcCCC-CCCCeEEEecCCCcEEEEeeEEe
Confidence 99998763 23455544433689999999997
No 14
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=94.41 E-value=0.4 Score=44.18 Aligned_cols=97 Identities=12% Similarity=0.148 Sum_probs=63.7
Q ss_pred CCCceEEEEEE---------EeeCCCCcEEEEecCCCCeEEEecCCCCCCCCCCCceEEEE-eCCCEEEEeeEEEecCC-
Q 041032 12 SGTGRFSWHSQ---------NNQRSMNNTMFVGDGIDRTIVTGHRNVPDGSTTSSPATFGV-SGDGFWARDMTFENTAG- 80 (268)
Q Consensus 12 ~~~~~~~I~Ik---------~i~~~k~~i~l~G~~~~~t~I~~~~~~~~g~~t~~saT~~v-~a~~f~a~niti~Nt~g- 80 (268)
...++.+|.|. .|.+ ++|+||.|++.. .|.+. -+.| .++++.++||.|++...
T Consensus 43 ~~~~PriIvv~G~I~~~~~~~l~v-~snkTI~G~ga~--~I~G~-------------Gi~I~~a~NVIIrnl~i~~~~~~ 106 (340)
T 3zsc_A 43 TAEGKYVIVVDGTIVFEPKREIKV-LSDKTIVGINDA--KIVGG-------------GLVIKDAQNVIIRNIHFEGFYME 106 (340)
T ss_dssp TSSSCEEEEEEEEEEEEEEEEEEE-CSSEEEEEEEEE--EEEEE-------------EEEEESCEEEEEESCEEECCCCT
T ss_pred hCCCCEEEEECcEEEeCCcceEEe-cCCCEEEeccCc--EEecC-------------ceEEEcCceEEEeCeEEECCccc
Confidence 34556667677 2334 689999999876 45431 2445 47899999999999742
Q ss_pred --C----CCCeeEEEEeeCCeeeEEeceeeccCCeEEeC---CccEEEEccEEe
Q 041032 81 --P----QKHEAVALRVSSDLSMFYRCSFKDYQDTLFTL---SLRQFYRDCQIY 125 (268)
Q Consensus 81 --~----~~~QAvAl~~~~dr~~f~~c~~~g~QDTL~~~---~gr~yf~~c~I~ 125 (268)
+ .+.-|+-+. .++++.+.+|.|....|=|+.- .-..=+.+|+|.
T Consensus 107 ~~~~~~~~~~DaI~i~-~s~nVWIDHcs~s~~~Dg~idi~~~s~~vTISnn~f~ 159 (340)
T 3zsc_A 107 DDPRGKKYDFDYINVE-NSHHIWIDHITFVNGNDGAVDIKKYSNYITVSWNKFV 159 (340)
T ss_dssp TCTTSCSSCCCSEEEE-SCEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEE
T ss_pred cCccCCcCCCCeEEEe-cCCcEEEEeeeeccCCccceEEecCCceEEEECcEec
Confidence 1 134444443 3688999999999888877662 123345566655
No 15
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=93.64 E-value=0.79 Score=43.42 Aligned_cols=114 Identities=10% Similarity=0.057 Sum_probs=77.1
Q ss_pred CceEEEEeCCCEEEEeeEEEecCCCCCCeeEEEEe------------eCCeeeEEeceeeccCCeEEeCCccEEEEccEE
Q 041032 57 SPATFGVSGDGFWARDMTFENTAGPQKHEAVALRV------------SSDLSMFYRCSFKDYQDTLFTLSLRQFYRDCQI 124 (268)
Q Consensus 57 ~saT~~v~a~~f~a~niti~Nt~g~~~~QAvAl~~------------~~dr~~f~~c~~~g~QDTL~~~~gr~yf~~c~I 124 (268)
+.--|.|.++...++|..|.= .| =.|++ ...|..|++|-|.|-=|=+|- .++.+|++|.|
T Consensus 224 QAVAL~v~gDr~~fy~C~f~G------~Q-DTLy~~~~~~~~~~~~d~~gRqyy~~CyIeGtVDFIFG-~a~AvFe~C~I 295 (422)
T 3grh_A 224 PAVALRTDGDQVQINNVNILG------RQ-NTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDVDIVSG-RGAVVFDNTEF 295 (422)
T ss_dssp CCCSEEECCSSEEEEEEEEEC------ST-TCEEECCCCTTCSCCSSCCCEEEEESCEEEESEEEEEE-SSEEEEESCEE
T ss_pred ceEEEEecCCcEEEEeeEEEe------ec-ceeeeccccccccccccccccEEEEecEEeccccEEcc-CceEEEEeeEE
Confidence 445688899999999999963 33 24554 457999999999999999997 58999999999
Q ss_pred eeec------eeEeccce-------eEEEeeEEEEeccCCCCceEEEeCCCCCCCCCeeEEEEcCEEeeC
Q 041032 125 YGTI------DFIVGDAA-------AVFQNFDIFVRRPMHDQSNMVTAQGRDNPNENTGISIEGSRIRPA 181 (268)
Q Consensus 125 ~G~v------DFIfG~g~-------a~f~~c~i~~~~~~~~~~~~ItA~~r~~~~~~~G~vf~~c~i~~~ 181 (268)
.-.- -+|.=..+ -+|.+|+|..... ..-|+--|=+......-=.||.+|.+...
T Consensus 296 ~s~~~~~~~~g~ITA~~t~~~~~~Gfvf~nC~ita~~~---~~~yLGRPW~~ysrt~~qVVf~~s~l~~~ 362 (422)
T 3grh_A 296 RVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFNAFGD---GVAQLGRSLDVDANTNGQVVIRDSAINEG 362 (422)
T ss_dssp EECCSSCSSCCEEEEECCBTTCCCCEEEESCEEEECSS---SCBEEEEEECCSTTBCCEEEEESCEECTT
T ss_pred EEecCCCCCceEEEecCCCCCCCCEEEEECCEEEeCCC---CCEEcCCCCCCcCCcCccEEEEeCcccCc
Confidence 8432 35553222 4899999986421 12333221111111111379999999754
No 16
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=93.48 E-value=2.8 Score=37.88 Aligned_cols=20 Identities=15% Similarity=0.350 Sum_probs=16.5
Q ss_pred CCcEEEEecCCCCeEEEecC
Q 041032 28 MNNTMFVGDGIDRTIVTGHR 47 (268)
Q Consensus 28 k~~i~l~G~~~~~t~I~~~~ 47 (268)
+++|+|+|+++.+|+|....
T Consensus 60 ~~~v~l~g~g~~~t~l~~~~ 79 (377)
T 2pyg_A 60 KDGVYLAGAGMGETVIKLID 79 (377)
T ss_dssp CTTEEEEESSBTTEEEEECT
T ss_pred cCCeEEEEcCCCCcEEEecC
Confidence 67899999998888887643
No 17
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=93.29 E-value=3.1 Score=38.36 Aligned_cols=117 Identities=15% Similarity=0.071 Sum_probs=68.4
Q ss_pred CCceEEEEEE-EeeCC-------------------CCcEEEEecCCCCeEEEecCCCCCCCCCCCceEEEE-eCCCEEEE
Q 041032 13 GTGRFSWHSQ-NNQRS-------------------MNNTMFVGDGIDRTIVTGHRNVPDGSTTSSPATFGV-SGDGFWAR 71 (268)
Q Consensus 13 ~~~~~~I~Ik-~i~~~-------------------k~~i~l~G~~~~~t~I~~~~~~~~g~~t~~saT~~v-~a~~f~a~ 71 (268)
.+++.+|.|. .|... .+++||+|.|.. ..|.+ .-|.| .++++.++
T Consensus 44 ~~~p~VI~V~GtI~~~~~~~~~s~~~~~~~~~l~v~sn~TI~G~G~~-~~i~g-------------~gl~i~~~~NVIIr 109 (355)
T 1pcl_A 44 DSSAKIIKVTGPIDISGGKAYTSFDDQKARSQISIPSNTTIIGVGSN-GKFTN-------------GSLVIKGVKNVILR 109 (355)
T ss_pred CCCcEEEEECCEEecCCccccccccccccceeEEeCCCeEEEEecCC-eEEec-------------CEEEEecCCeEEEe
Confidence 5567788888 33221 577888887543 33332 12555 47899999
Q ss_pred eeEEEecCC--C----C---CCeeEEEEe-eCCeeeEEeceeeccCCeEE---eCCccEEEEccEEeeeceeEeccceeE
Q 041032 72 DMTFENTAG--P----Q---KHEAVALRV-SSDLSMFYRCSFKDYQDTLF---TLSLRQFYRDCQIYGTIDFIVGDAAAV 138 (268)
Q Consensus 72 niti~Nt~g--~----~---~~QAvAl~~-~~dr~~f~~c~~~g~QDTL~---~~~gr~yf~~c~I~G~vDFIfG~g~a~ 138 (268)
||+|++... | . +...=||.+ .++++-+.+|.|....|.=- ...||++. + -.|.+|..=|.-..-
T Consensus 110 nl~i~~~~~~~p~~~~~~g~~~~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~--~-~Dgl~Di~~~s~~VT 186 (355)
T 1pcl_A 110 NLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYV--Q-HDGALDIKKGSDYVT 186 (355)
T ss_pred eeEEEcCcccccccccccCccccCceEEecCCCcEEEEeeEEeccccCccccccccCcccc--c-cccceeeecCCCcEE
Confidence 999998642 1 0 022335555 56899999999985432211 11255531 1 234556554555556
Q ss_pred EEeeEEEE
Q 041032 139 FQNFDIFV 146 (268)
Q Consensus 139 f~~c~i~~ 146 (268)
+.+|.|.-
T Consensus 187 iS~n~f~~ 194 (355)
T 1pcl_A 187 ISYSRFEL 194 (355)
T ss_pred EEeeEEcC
Confidence 78888764
No 18
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=93.23 E-value=0.45 Score=43.54 Aligned_cols=81 Identities=11% Similarity=0.060 Sum_probs=49.6
Q ss_pred EEEEe--CCCEEEEeeEEEecCCCCCCeeEEEEe----eCCeeeEEeceeeccCCeEEeCCccEEEEccEEeeeceeEec
Q 041032 60 TFGVS--GDGFWARDMTFENTAGPQKHEAVALRV----SSDLSMFYRCSFKDYQDTLFTLSLRQFYRDCQIYGTIDFIVG 133 (268)
Q Consensus 60 T~~v~--a~~f~a~niti~Nt~g~~~~QAvAl~~----~~dr~~f~~c~~~g~QDTL~~~~gr~yf~~c~I~G~vDFIfG 133 (268)
-|.|. ++++.++||+|++-....+.-|+-+.- .++++-+.+|.|...-|. +.+.++++| .|.+|..-|
T Consensus 87 gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~-~~~~~~~~~-----Dg~idi~~~ 160 (330)
T 2qy1_A 87 GIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTK-CSGAGDASF-----DGGIDMKKG 160 (330)
T ss_dssp EEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCC-CTTCTTCSS-----CCSEEEESS
T ss_pred eEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccc-cccCCccee-----ecccccccC
Confidence 46775 789999999999754211244555553 488999999999643321 222345443 455555555
Q ss_pred cceeEEEeeEEEE
Q 041032 134 DAAAVFQNFDIFV 146 (268)
Q Consensus 134 ~g~a~f~~c~i~~ 146 (268)
.-..-+.+|.|+.
T Consensus 161 s~~VTISnn~f~~ 173 (330)
T 2qy1_A 161 VHHVTVSYNYVYN 173 (330)
T ss_dssp CEEEEEESCEEEE
T ss_pred cceEEEEcceecc
Confidence 4445566666653
No 19
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=92.03 E-value=0.86 Score=42.19 Aligned_cols=67 Identities=12% Similarity=0.161 Sum_probs=47.2
Q ss_pred EEE--eCCCEEEEeeEEEecCCC--CCCeeEEEEeeCCeeeEEeceeeccCCeEEeC----CccEEEEccEEeeec
Q 041032 61 FGV--SGDGFWARDMTFENTAGP--QKHEAVALRVSSDLSMFYRCSFKDYQDTLFTL----SLRQFYRDCQIYGTI 128 (268)
Q Consensus 61 ~~v--~a~~f~a~niti~Nt~g~--~~~QAvAl~~~~dr~~f~~c~~~g~QDTL~~~----~gr~yf~~c~I~G~v 128 (268)
|.| .++++.++||+|++-... .+.-|+-+. .++++.+.+|.|...-|-++.. ....=+.+|+|.|.-
T Consensus 126 l~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~-~s~nVwIDHcs~s~~~d~~~~~g~~~s~~VTISnn~f~~~~ 200 (359)
T 1idk_A 126 LRIVSGAENIIIQNIAVTDINPKYVWGGDAITLD-DCDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYIDGVS 200 (359)
T ss_dssp EEECTTCEEEEEESCEEEEECTTEETSCCSEEEC-SCEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEECBC
T ss_pred EEEecCCCcEEEeCeEEEcccccccccCCceeec-CCCcEEEEeeEeecCCCCcEEecccCcceEEEECcEecCCc
Confidence 777 578999999999985221 123344443 5789999999999877777642 234567789988764
No 20
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=91.99 E-value=1.6 Score=40.28 Aligned_cols=68 Identities=13% Similarity=0.090 Sum_probs=49.1
Q ss_pred EEE--eCCCEEEEeeEEEecCCC--CCCeeEEEEeeCCeeeEEeceeeccCCeEEe-C---CccEEEEccEEeeece
Q 041032 61 FGV--SGDGFWARDMTFENTAGP--QKHEAVALRVSSDLSMFYRCSFKDYQDTLFT-L---SLRQFYRDCQIYGTID 129 (268)
Q Consensus 61 ~~v--~a~~f~a~niti~Nt~g~--~~~QAvAl~~~~dr~~f~~c~~~g~QDTL~~-~---~gr~yf~~c~I~G~vD 129 (268)
|.| .++++.++||+|++.-.. .+.-|+-+. .++++.+.+|.|....|-++. . .-..=..+|+|.+..|
T Consensus 126 l~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~-~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~~~~~ 201 (359)
T 1qcx_A 126 LRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVD-DSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSD 201 (359)
T ss_dssp EEEETTCCCEEEESCEEEEECTTEETSCCSEEEE-SCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEECBCS
T ss_pred EEEecCCCCEEEeCcEEEecCCcccccCceeEec-CCceEEEEeeEeeccCcCceeecccccccEEEECcEecCCcc
Confidence 777 679999999999996431 123445444 468889999999988887763 1 2244678899988755
No 21
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=91.82 E-value=0.76 Score=42.61 Aligned_cols=116 Identities=16% Similarity=0.126 Sum_probs=67.4
Q ss_pred CCCceEEEEEE-EeeCC-------------------CCcEEEEecCCCCeEEEecCCCCCCCCCCCceEEEE----eCCC
Q 041032 12 SGTGRFSWHSQ-NNQRS-------------------MNNTMFVGDGIDRTIVTGHRNVPDGSTTSSPATFGV----SGDG 67 (268)
Q Consensus 12 ~~~~~~~I~Ik-~i~~~-------------------k~~i~l~G~~~~~t~I~~~~~~~~g~~t~~saT~~v----~a~~ 67 (268)
+.+++.+|.|. .|... .+|+||+|.|..-++ .. .-|.| .+++
T Consensus 50 ~~~~p~vI~V~GtI~~~~~~~~~s~~~~~~~~~l~v~snkTI~G~G~~~~i-~g-------------~gl~i~~~~~~~N 115 (361)
T 1pe9_A 50 AGAEAKIIQIKGTIDISGGTPYTDFADQKARSQINIPANTTVIGLGTDAKF-IN-------------GSLIIDGTDGTNN 115 (361)
T ss_dssp TTTSCEEEEECSEEETTTTCCCCSHHHHHHHSEEECCSSEEEEECTTCCEE-ES-------------SEEEEEGGGTCEE
T ss_pred cCCCcEEEEECCEEecCCccccccccccccceeEEecCCcEEEccCCCeEE-ec-------------CEEEEecCCCCce
Confidence 45667888888 43221 578888887654333 32 23677 4689
Q ss_pred EEEEeeEEEecCC--C----CC---CeeEEEEee--CCeeeEEeceeeccCCe-----EEeCCccEEEEccEEeeeceeE
Q 041032 68 FWARDMTFENTAG--P----QK---HEAVALRVS--SDLSMFYRCSFKDYQDT-----LFTLSLRQFYRDCQIYGTIDFI 131 (268)
Q Consensus 68 f~a~niti~Nt~g--~----~~---~QAvAl~~~--~dr~~f~~c~~~g~QDT-----L~~~~gr~yf~~c~I~G~vDFI 131 (268)
+.++||+|++... | .. ...-||.+. ++++-+.+|.|....|. .+ .||++. | -.|.+|..
T Consensus 116 VIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~--~G~~~~--~-~DgllDi~ 190 (361)
T 1pe9_A 116 VIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTK--DGETYV--Q-HDGALDIK 190 (361)
T ss_dssp EEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEE--TTEECC--C-CCCSEEEC
T ss_pred EEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccc--cCccee--e-ccceeeee
Confidence 9999999998642 1 00 123356664 58899999999854322 11 244431 1 13344544
Q ss_pred eccceeEEEeeEEEE
Q 041032 132 VGDAAAVFQNFDIFV 146 (268)
Q Consensus 132 fG~g~a~f~~c~i~~ 146 (268)
-|.-..-+.+|.|.-
T Consensus 191 ~~s~~VTiS~n~f~~ 205 (361)
T 1pe9_A 191 RGSDYVTISNSLIDQ 205 (361)
T ss_dssp TTCEEEEEESCEEEE
T ss_pred cCCCcEEEEeeEEcC
Confidence 444444556666653
No 22
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=91.28 E-value=1.2 Score=41.78 Aligned_cols=102 Identities=18% Similarity=0.256 Sum_probs=60.1
Q ss_pred CCcEEEEecCCCCeEEEecCCCCCCCCCCCceEEEEeCCCEEEEeeEEEecCC--C----C-------CCeeEEEEe-eC
Q 041032 28 MNNTMFVGDGIDRTIVTGHRNVPDGSTTSSPATFGVSGDGFWARDMTFENTAG--P----Q-------KHEAVALRV-SS 93 (268)
Q Consensus 28 k~~i~l~G~~~~~t~I~~~~~~~~g~~t~~saT~~v~a~~f~a~niti~Nt~g--~----~-------~~QAvAl~~-~~ 93 (268)
.+|+||+|.|..-++ .. .-|.|..+++.++||+|++... | . ....=||.+ .+
T Consensus 126 ~snkTI~G~G~~~~i-~g-------------~gl~i~~~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s 191 (399)
T 2o04_A 126 PANTTIVGSGTNAKV-VG-------------GNFQIKSDNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGG 191 (399)
T ss_dssp CSSEEEEESSSCCEE-ES-------------CEEEECSEEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESC
T ss_pred CCCceEEeccCCeEE-ee-------------CEEEeeCCCEEEeCeEEecCccccccccccccccccccCCCCeEEecCC
Confidence 678888888654333 32 2477877899999999998642 1 0 012235555 56
Q ss_pred CeeeEEeceeeccCCeE---EeCCccEEEEccEEeeeceeEeccceeEEEeeEEEE
Q 041032 94 DLSMFYRCSFKDYQDTL---FTLSLRQFYRDCQIYGTIDFIVGDAAAVFQNFDIFV 146 (268)
Q Consensus 94 dr~~f~~c~~~g~QDTL---~~~~gr~yf~~c~I~G~vDFIfG~g~a~f~~c~i~~ 146 (268)
+++-+.+|.|.-..|.= -..-||+|. | -.|.+|..=|.-..-+.+|.|.-
T Consensus 192 ~nVWIDHcs~s~~~~~d~~~~~~~G~~~~--~-~Dgl~Di~~~s~~VTISnn~f~~ 244 (399)
T 2o04_A 192 THIWIDHCTFNDGSRPDSTSPKYYGRKYQ--H-HDGQTDASNGANYITMSYNYYHD 244 (399)
T ss_dssp EEEEEESCEEECTTCCGGGSCEETTEECC--C-CCCSEEEETTCEEEEEESCEEEE
T ss_pred CcEEEEeeeeecCCCccccccccccceee--c-cccceeeeccCCcEEEEeeEEcC
Confidence 88999999998543320 000144432 1 23445555455455677777764
No 23
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=89.79 E-value=2.2 Score=39.20 Aligned_cols=107 Identities=9% Similarity=0.038 Sum_probs=61.9
Q ss_pred CCcCCC---CCCceEEEEEE---------EeeCCCCcEEEEecCCCCeEEEecCCCCCCCCCCCceEEE-EeCCCEEEEe
Q 041032 6 GQGRLG---SGTGRFSWHSQ---------NNQRSMNNTMFVGDGIDRTIVTGHRNVPDGSTTSSPATFG-VSGDGFWARD 72 (268)
Q Consensus 6 g~g~~~---~~~~~~~I~Ik---------~i~~~k~~i~l~G~~~~~t~I~~~~~~~~g~~t~~saT~~-v~a~~f~a~n 72 (268)
|.|.|+ ..+++.+|.+. .|.+ .+++||.|.+. +.+|.++. +-+. ..++++.++|
T Consensus 54 ~~GsLr~av~~~~P~~Ivf~~~g~I~l~~~l~V-~sn~TI~G~ga-~~~i~G~G-----------~gi~i~~a~NVIIrn 120 (346)
T 1pxz_A 54 TPGTLRYGATREKALWIIFSQNMNIKLKMPLYV-AGHKTIDGRGA-DVHLGNGG-----------PCLFMRKVSHVILHS 120 (346)
T ss_dssp CTTSHHHHHHCSSCEEEEESSCEEECCSSCEEC-CSSEEEECTTS-CEEEETTS-----------CCEEEESCEEEEEES
T ss_pred CcchhHHHhccCCCeEEEEcCCcEEecCccEEe-cCCeEEEccCC-ceEEeCCc-----------ceEEEEccCCEEEEe
Confidence 677776 33444444433 3333 46899999874 34444311 1122 3578999999
Q ss_pred eEEEecCCCC----------------CCeeEEEEe-eCCeeeEEeceeeccCCeEEeC---CccEEEEccEEe
Q 041032 73 MTFENTAGPQ----------------KHEAVALRV-SSDLSMFYRCSFKDYQDTLFTL---SLRQFYRDCQIY 125 (268)
Q Consensus 73 iti~Nt~g~~----------------~~QAvAl~~-~~dr~~f~~c~~~g~QDTL~~~---~gr~yf~~c~I~ 125 (268)
|+|++..... ....=||.+ .+.++.+.+|.|.-..|=|+.- .-..=+.+|+|.
T Consensus 121 l~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~~s~nVwIDHcs~s~~~Dg~id~~~~s~~vTISnn~f~ 193 (346)
T 1pxz_A 121 LHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTLGSTGITISNNHFF 193 (346)
T ss_dssp CEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEESCEEEEEESCEEECCSSEEEEEESSCEEEEEESCEEE
T ss_pred eEEEeeccCCCceEEeccCcccccccCCCCCEEEEecCceEEEEeeEEecCCCCcEeeccCcceEEEEeeEEe
Confidence 9999864211 112235555 3567778999998877777532 123345566655
No 24
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=88.23 E-value=2 Score=40.19 Aligned_cols=91 Identities=10% Similarity=0.095 Sum_probs=63.2
Q ss_pred EEEEeeCCeeeEEeceeeccCC-eEEeCCccEEEEccEEeeece---eEeccc-eeEEEeeEEEEeccCC---CCceEEE
Q 041032 87 VALRVSSDLSMFYRCSFKDYQD-TLFTLSLRQFYRDCQIYGTID---FIVGDA-AAVFQNFDIFVRRPMH---DQSNMVT 158 (268)
Q Consensus 87 vAl~~~~dr~~f~~c~~~g~QD-TL~~~~gr~yf~~c~I~G~vD---FIfG~g-~a~f~~c~i~~~~~~~---~~~~~It 158 (268)
.+|.+.++-..++++.|....+ -++..+.+.-+++|.|++.-| +|.+.+ ..++++|+|+...... ....-|.
T Consensus 108 ~~i~i~~~~~~i~gl~I~n~g~~GI~v~gs~~~i~n~~i~~n~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~~dG~~ 187 (400)
T 1ru4_A 108 YGFYVTGDYWYFKGVEVTRAGYQGAYVIGSHNTFENTAFHHNRNTGLEINNGGSYNTVINSDAYRNYDPKKNGSMADGFG 187 (400)
T ss_dssp CSEEECSSCEEEESEEEESCSSCSEEECSSSCEEESCEEESCSSCSEEECTTCCSCEEESCEEECCCCTTTTTSSCCSEE
T ss_pred eEEEEECCeEEEEeEEEEeCCCCcEEEeCCCcEEEeEEEECCCceeEEEEcccCCeEEEceEEEcccCccccCcccceEE
Confidence 3477799999999999953322 677776677999999999988 444544 7899999999764211 1112244
Q ss_pred eCCCCCCCCCeeEEEEcCEEeeC
Q 041032 159 AQGRDNPNENTGISIEGSRIRPA 181 (268)
Q Consensus 159 A~~r~~~~~~~G~vf~~c~i~~~ 181 (268)
+... ...|.+|.+|++...
T Consensus 188 ~~~~----~g~Gn~~~~~~~~~N 206 (400)
T 1ru4_A 188 PKQK----QGPGNRFVGCRAWEN 206 (400)
T ss_dssp ECTT----CCSCCEEESCEEESC
T ss_pred EEec----ccCCeEEECCEEeec
Confidence 4322 136999999998744
No 25
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=87.34 E-value=3.5 Score=38.89 Aligned_cols=102 Identities=21% Similarity=0.204 Sum_probs=58.0
Q ss_pred CCcEEEEecCCCCeEEEecCCCCCCCCCCCceEEEE-eCCCEEEEeeEEEecCC--C----C-------CCeeEEEEe-e
Q 041032 28 MNNTMFVGDGIDRTIVTGHRNVPDGSTTSSPATFGV-SGDGFWARDMTFENTAG--P----Q-------KHEAVALRV-S 92 (268)
Q Consensus 28 k~~i~l~G~~~~~t~I~~~~~~~~g~~t~~saT~~v-~a~~f~a~niti~Nt~g--~----~-------~~QAvAl~~-~ 92 (268)
.+|+||+|.|..-+ |.. .-|.| .++++.++||+|++... | . ....=||.+ .
T Consensus 131 ~snkTI~G~G~~~~-i~g-------------~gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~ 196 (416)
T 1vbl_A 131 GSNTSIIGVGKDAK-IKG-------------GGFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEG 196 (416)
T ss_dssp CSSEEEEECTTCCE-EES-------------CEEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEES
T ss_pred CCCeeEEecCCCeE-Eec-------------CEEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecC
Confidence 57888888765333 332 23566 46899999999998642 1 0 012235555 5
Q ss_pred CCeeeEEeceeeccCCe--E-EeCCccEEEEccEEeeeceeEeccceeEEEeeEEEE
Q 041032 93 SDLSMFYRCSFKDYQDT--L-FTLSLRQFYRDCQIYGTIDFIVGDAAAVFQNFDIFV 146 (268)
Q Consensus 93 ~dr~~f~~c~~~g~QDT--L-~~~~gr~yf~~c~I~G~vDFIfG~g~a~f~~c~i~~ 146 (268)
++++-+.+|.|.-..|. - -..-||+|. | -.|.+|+.=|.-..-+.+|.|.-
T Consensus 197 s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~--~-~DGl~Di~~~s~~VTISnn~f~~ 250 (416)
T 1vbl_A 197 SSHIWIDHNTFTDGDHPDRSLGTYFGRPFQ--Q-HDGALDIKNSSDFITISYNVFTN 250 (416)
T ss_dssp CEEEEEESCEEECTTCCGGGSCEETTEECC--C-CCCSEEEESSCEEEEEESCEEEE
T ss_pred CceEEEEccEEecCCCcccccccccCccee--e-cccceeeecCCCcEEEEeeEEcC
Confidence 68899999999854322 0 000144431 1 23445554444445566666664
No 26
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=85.10 E-value=21 Score=32.10 Aligned_cols=80 Identities=8% Similarity=0.052 Sum_probs=45.6
Q ss_pred EEEE-eCCCEEEEeeEEEecCCCCCCeeEEEEeeCCeeeEEeceeeccCC---------eEEeCC-ccEEEEccEEeeec
Q 041032 60 TFGV-SGDGFWARDMTFENTAGPQKHEAVALRVSSDLSMFYRCSFKDYQD---------TLFTLS-LRQFYRDCQIYGTI 128 (268)
Q Consensus 60 T~~v-~a~~f~a~niti~Nt~g~~~~QAvAl~~~~dr~~f~~c~~~g~QD---------TL~~~~-gr~yf~~c~I~G~v 128 (268)
.+.+ ..+++.+++|+|+|+.. .++-+. .+.+.+.+|.+.+..+ =+-... .....++|+|.-.=
T Consensus 102 ~i~~~~~~nv~i~~i~i~nsp~----~~i~i~--~~nv~i~~~~I~~~~~d~~~~~ntDGidi~~s~nV~I~n~~i~~gD 175 (336)
T 1nhc_A 102 FMYIHDVEDSTFKGINIKNTPV----QAISVQ--ATNVHLNDFTIDNSDGDDNGGHNTDGFDISESTGVYISGATVKNQD 175 (336)
T ss_dssp CEEEEEEEEEEEESCEEECCSS----CCEEEE--EEEEEEESCEEECTTHHHHTCCSCCSEEECSCEEEEEESCEEESSS
T ss_pred EEEEeeeCcEEEEEEEEEeCCc----cEEEEE--eCCEEEEEEEEECCCcccccCCCCCcEEecCCCeEEEEeCEEEcCC
Confidence 3444 57789999999999842 234444 6777777777776432 232222 23366677775433
Q ss_pred eeEe-ccc-eeEEEeeEEE
Q 041032 129 DFIV-GDA-AAVFQNFDIF 145 (268)
Q Consensus 129 DFIf-G~g-~a~f~~c~i~ 145 (268)
|=|- +.+ ...+++|.+.
T Consensus 176 Dciaiksg~nI~i~n~~~~ 194 (336)
T 1nhc_A 176 DCIAINSGESISFTGGTCS 194 (336)
T ss_dssp EEEEESSEEEEEEESCEEE
T ss_pred CEEEEeCCeEEEEEeEEEE
Confidence 4332 332 2555555544
No 27
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=84.41 E-value=5.9 Score=36.44 Aligned_cols=47 Identities=6% Similarity=0.049 Sum_probs=32.2
Q ss_pred EEE-eCCCEEEEeeEEEecCCC-CCCeeEEEEeeCCeeeEEeceeeccCC
Q 041032 61 FGV-SGDGFWARDMTFENTAGP-QKHEAVALRVSSDLSMFYRCSFKDYQD 108 (268)
Q Consensus 61 ~~v-~a~~f~a~niti~Nt~g~-~~~QAvAl~~~~dr~~f~~c~~~g~QD 108 (268)
|.| .++++.++||+|++..+. .+.=|+-+. .++++-+.+|.|...+|
T Consensus 105 l~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~-~s~nVWIDH~s~s~~~~ 153 (353)
T 1air_A 105 IWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVD-DSPNVWVDHNELFAANH 153 (353)
T ss_dssp EEEESCCSEEEESCEEESCSCGGGTCCSEEEE-SCCSEEEESCEEECCSC
T ss_pred EEEeccCcEEEeccEEEeCCCCCCCCCeEEee-CCCcEEEEeeEEecCCc
Confidence 555 568999999999964321 112333333 56899999999987654
No 28
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=81.85 E-value=29 Score=35.11 Aligned_cols=118 Identities=15% Similarity=0.104 Sum_probs=69.1
Q ss_pred CceEEEEEE----Ee---eCCCCcEEEEecCCCCeEEEecCCCCCCCC-----CC--CceEEEEeC--CCEEEEeeEEEe
Q 041032 14 TGRFSWHSQ----NN---QRSMNNTMFVGDGIDRTIVTGHRNVPDGST-----TS--SPATFGVSG--DGFWARDMTFEN 77 (268)
Q Consensus 14 ~~~~~I~Ik----~i---~~~k~~i~l~G~~~~~t~I~~~~~~~~g~~-----t~--~saT~~v~a--~~f~a~niti~N 77 (268)
.++-+|+|- .| ..-+.++.|+|++.+.++|....+-. +.. .+ ..+-..... -...++||+|..
T Consensus 88 ~~~~~V~~P~GtYlvs~tI~l~~~t~L~G~~~~~pvIka~~~F~-G~~li~~d~y~~~G~~w~~~~~~F~r~irNlviD~ 166 (758)
T 3eqn_A 88 TQPALVYFPPGTYKVSSPLVVLYQTQLIGDAKNLPTLLAAPNFS-GIALIDADPYLAGGAQYYVNQNNFFRSVRNFVIDL 166 (758)
T ss_dssp SSCEEEEECSSEEEESSCEECCTTEEEEECSSSCCEEEECTTCC-SSCSEESSCBCGGGCBSSCGGGCCCEEEEEEEEEC
T ss_pred ccceEEEECCceEEEcccEEccCCeEEEecCCCCCeEecCCCCC-CcceeeccccCCCCccccccccceeeeecceEEec
Confidence 345677777 22 12368999999999988886643321 100 00 000000000 135788999987
Q ss_pred cCCCCCCeeEEEEe-eCCeeeEEeceeecc------CCeEEeCCc-cEEEEccEEee-eceeEecc
Q 041032 78 TAGPQKHEAVALRV-SSDLSMFYRCSFKDY------QDTLFTLSL-RQFYRDCQIYG-TIDFIVGD 134 (268)
Q Consensus 78 t~g~~~~QAvAl~~-~~dr~~f~~c~~~g~------QDTL~~~~g-r~yf~~c~I~G-~vDFIfG~ 134 (268)
+..+.. +.+|.. .+....+.||.|..- |+=|+...| --+..|+.|.| ++=..+|+
T Consensus 167 t~~~~~--~~gIhw~vaQatsL~Nv~i~m~~~sg~~~~GI~~e~GSgg~i~Dl~f~GG~~G~~~gn 230 (758)
T 3eqn_A 167 RQVSGS--ATGIHWQVSQATSLINIVFQMSTAAGNQHQGIFMENGSGGFLGDLVFNGGNIGATFGN 230 (758)
T ss_dssp TTCSSC--EEEEECCCCSSEEEEEEEEECCCSTTCCEEEEEECSCCCCEEEEEEEESCSEEEEEEC
T ss_pred cccCCC--ceEEEEEecCceEEEEEEEEecCCCCCcceeEEecCCCceEEEeeEEeCCceEEEcCC
Confidence 765433 777776 467788889999874 445666543 34777777774 33344454
No 29
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=79.46 E-value=37 Score=32.23 Aligned_cols=110 Identities=8% Similarity=-0.009 Sum_probs=66.2
Q ss_pred eCCCEEEEeeEEEecCCCCCCeeE------EEEeeCCeeeEEeceeeccCCeEE---eCCc-cEEEEccEEeee--ceeE
Q 041032 64 SGDGFWARDMTFENTAGPQKHEAV------ALRVSSDLSMFYRCSFKDYQDTLF---TLSL-RQFYRDCQIYGT--IDFI 131 (268)
Q Consensus 64 ~a~~f~a~niti~Nt~g~~~~QAv------Al~~~~dr~~f~~c~~~g~QDTL~---~~~g-r~yf~~c~I~G~--vDFI 131 (268)
..+++.++||+|.|...-.....| .+.+..+.+.+.+|.|....|++. .... ...+++|++.|. +.+-
T Consensus 139 ~~~Nv~I~gIti~n~w~ih~s~~V~i~NtDGi~i~s~nV~I~n~~I~~gddgiGs~~~~~~~NV~V~n~~~~gg~GIrIk 218 (464)
T 1h80_A 139 DVRNYKISNFTIDDNKTIFASILVDVTERNGRLHWSRNGIIERIKQNNALFGYGLIQTYGADNILFRNLHSEGGIALRME 218 (464)
T ss_dssp SEEEEEEEEEEEECCSCBSCSEEECEEEETTEEEEEEEEEEEEEEEESCCTTCEEEEESEEEEEEEEEEEEESSEEEEEE
T ss_pred eeccEEEeeeEEeccceEeeceeeeeecCCCceeeccCEEEeceEEecCCCeEEecccCCEeEEEEEeeEEECCCEEEEE
Confidence 357899999999995532111111 013367788899999999888874 1222 348999997771 1011
Q ss_pred ec-----c------ceeEEEeeEEEEeccCCCCceEEEeCCCCCCCCCeeEEEEcCEEeeC
Q 041032 132 VG-----D------AAAVFQNFDIFVRRPMHDQSNMVTAQGRDNPNENTGISIEGSRIRPA 181 (268)
Q Consensus 132 fG-----~------g~a~f~~c~i~~~~~~~~~~~~ItA~~r~~~~~~~G~vf~~c~i~~~ 181 (268)
-| . ....|++|++.... .+++.-+.. ..-..+.|.|.+.+..
T Consensus 219 tg~d~IG~~~~g~v~NI~~~Ni~~~nv~-----~~I~I~p~~---~~isnItfeNI~~t~~ 271 (464)
T 1h80_A 219 TDNLLMKNYKQGGIRNIFADNIRCSKGL-----AAVMFGPHF---MKNGDVQVTNVSSVSC 271 (464)
T ss_dssp CCCHHHHHHTCCEEEEEEEEEEEEESSS-----EEEEEECTT---CBCCCEEEEEEEEESS
T ss_pred eCCceeccCCCCcEEEEEEEeEEEECCc-----eeEEEeCCC---ceEeEEEEEEEEEEcc
Confidence 11 1 23578888877532 243333221 2235788999888864
No 30
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=78.52 E-value=54 Score=32.32 Aligned_cols=77 Identities=14% Similarity=0.181 Sum_probs=41.8
Q ss_pred CCCEEEEeeEEEecCCCCCCeeEEEEe----------------eCCeeeEEeceeecc-CCeEEeCCccE-EEEccEEee
Q 041032 65 GDGFWARDMTFENTAGPQKHEAVALRV----------------SSDLSMFYRCSFKDY-QDTLFTLSLRQ-FYRDCQIYG 126 (268)
Q Consensus 65 a~~f~a~niti~Nt~g~~~~QAvAl~~----------------~~dr~~f~~c~~~g~-QDTL~~~~gr~-yf~~c~I~G 126 (268)
.+++.++||+|.|+.. +.+-+.. ....+...+|.|.+. -|=+.....+. .+++|+++|
T Consensus 142 c~NV~I~gVti~NSp~----~gI~I~~~~~NDGid~DGi~fd~~S~NV~I~Nc~I~~tGDDcIaIksseNI~I~Nc~~~g 217 (609)
T 3gq8_A 142 CHNVYIRDIEAVDCTL----HGIDITCGGLDYPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHHSQYINILNCYSHD 217 (609)
T ss_dssp CEEEEEEEEEEESCSS----CSEEEECSSSSCCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECSCEEEEEESCEEEC
T ss_pred eceEEEEeeEEEeCCC----CCeEEeCCCCCccccCCCccccccceeEEEEeeEEEecCCCEEEecCCeeEEEEeEEEEC
Confidence 4567888888888743 1122221 135577777777654 34455544333 777777743
Q ss_pred e------ceeEecc--ceeEEEeeEEE
Q 041032 127 T------IDFIVGD--AAAVFQNFDIF 145 (268)
Q Consensus 127 ~------vDFIfG~--g~a~f~~c~i~ 145 (268)
. -=+-.|. ....+++|.+.
T Consensus 218 p~G~S~~~GIsIGsgs~NVtV~Nc~i~ 244 (609)
T 3gq8_A 218 PRLTANCNGFEIDDGSRHVVLSNNRSK 244 (609)
T ss_dssp CSSCSSCCSEEECTTCEEEEEESEEEE
T ss_pred CCCCCCcccEEccCCcccEEEEeeEEE
Confidence 2 1122232 24567777765
No 31
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=78.41 E-value=12 Score=34.21 Aligned_cols=66 Identities=12% Similarity=0.089 Sum_probs=35.8
Q ss_pred EEEEe-CCCEEEEeeEEEecCCCCCCeeEEEEe-eCCeeeEEeceeeccC-----CeEEeCC-ccEEEEccEEeeeceeE
Q 041032 60 TFGVS-GDGFWARDMTFENTAGPQKHEAVALRV-SSDLSMFYRCSFKDYQ-----DTLFTLS-LRQFYRDCQIYGTIDFI 131 (268)
Q Consensus 60 T~~v~-a~~f~a~niti~Nt~g~~~~QAvAl~~-~~dr~~f~~c~~~g~Q-----DTL~~~~-gr~yf~~c~I~G~vDFI 131 (268)
.+.+. .+++.+++|+|+|+.. ..+.+ ..+.+.+.++++.+.. |=+-... .....++|+|.-.=|-|
T Consensus 153 ~i~~~~~~nv~I~~iti~nsp~------~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcI 226 (376)
T 1bhe_A 153 LIQINKSKNFTLYNVSLINSPN------FHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNV 226 (376)
T ss_dssp SEEEESCEEEEEEEEEEECCSS------CSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECSSCSE
T ss_pred EEEEEcceEEEEEeEEEECCCc------EEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecCCCeE
Confidence 34444 6789999999999842 12222 3455666666666532 2222222 22355666665444433
No 32
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=76.99 E-value=27 Score=32.96 Aligned_cols=107 Identities=7% Similarity=0.015 Sum_probs=57.6
Q ss_pred EeCCCEEEEeeEEEecCCCCCCeeEEEEe-eCCeeeEEeceeecc---CCeEEeCCc-cEEEEccEEeeeceeEe-cc--
Q 041032 63 VSGDGFWARDMTFENTAGPQKHEAVALRV-SSDLSMFYRCSFKDY---QDTLFTLSL-RQFYRDCQIYGTIDFIV-GD-- 134 (268)
Q Consensus 63 v~a~~f~a~niti~Nt~g~~~~QAvAl~~-~~dr~~f~~c~~~g~---QDTL~~~~g-r~yf~~c~I~G~vDFIf-G~-- 134 (268)
...+++.+++|++.|+.. -.+.+ ..+.+.+.++.+.+. -|=+-.... ....++|+|.-.=|=|. ..
T Consensus 196 ~~~~nv~i~giti~nsp~------~~i~~~~~~nv~i~~v~I~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaiksg~ 269 (448)
T 3jur_A 196 YRCRNVLVEGVKIINSPM------WCIHPVLSENVIIRNIEISSTGPNNDGIDPESCKYMLIEKCRFDTGDDSVVIKSGR 269 (448)
T ss_dssp ESCEEEEEESCEEESCSS------CSEEEESCEEEEEESCEEEECSTTCCSBCCBSCEEEEEESCEEEESSEEEEEBCCC
T ss_pred EcccceEEEeeEEEeCCC------ceEeeeccCCEEEEeEEEeeccCCCccccccCCcCEEEEeeEEEeCCCcEEeccCc
Confidence 346789999999999843 12222 456677777777652 333333322 33667777765555443 21
Q ss_pred -----------ceeEEEeeEEEEeccCCCCceEEEeCCCCCCCCCeeEEEEcCEEee
Q 041032 135 -----------AAAVFQNFDIFVRRPMHDQSNMVTAQGRDNPNENTGISIEGSRIRP 180 (268)
Q Consensus 135 -----------g~a~f~~c~i~~~~~~~~~~~~ItA~~r~~~~~~~G~vf~~c~i~~ 180 (268)
....+++|.+.+.. .++.|.--+ .....-..+.|.||.+..
T Consensus 270 ~~dg~~~~~ps~nI~I~n~~~~~~~----gh~gisiGS-~~~~~v~nV~v~n~~~~~ 321 (448)
T 3jur_A 270 DADGRRIGVPSEYILVRDNLVISQA----SHGGLVIGS-EMSGGVRNVVARNNVYMN 321 (448)
T ss_dssp HHHHHHHCCCEEEEEEESCEEECSS----CSEEEEECS-SCTTCEEEEEEESCEEES
T ss_pred cccccccCCCceeEEEEEeEEecCC----CcceEEECC-cccCcEEEEEEEEEEEec
Confidence 23556666664321 123344322 222333456677777753
No 33
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=75.27 E-value=16 Score=33.25 Aligned_cols=41 Identities=10% Similarity=0.029 Sum_probs=26.7
Q ss_pred EEEE-e--CCCEEEEeeEEEecCCCCCCeeEEEEe-eCCeeeEEeceeecc
Q 041032 60 TFGV-S--GDGFWARDMTFENTAGPQKHEAVALRV-SSDLSMFYRCSFKDY 106 (268)
Q Consensus 60 T~~v-~--a~~f~a~niti~Nt~g~~~~QAvAl~~-~~dr~~f~~c~~~g~ 106 (268)
.|.+ . .+++.+++|+|+|+.. -.+.+ ..+.+.+.++++.+.
T Consensus 104 ~i~~~~~~~~nv~I~giti~nsp~------~~i~i~~~~nv~i~~~~I~~~ 148 (349)
T 1hg8_A 104 HFIVVQKTTGNSKITNLNIQNWPV------HCFDITGSSQLTISGLILDNR 148 (349)
T ss_dssp EEEEEEEEESSEEEESCEEECCSS------EEEEEESCEEEEEEEEEEECG
T ss_pred EEEEeecCcCcEEEEEEEEEcCCC------ceEEEeccCCEEEEEEEEECC
Confidence 5666 5 4589999999999842 33433 345666666666653
No 34
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=72.94 E-value=56 Score=29.73 Aligned_cols=105 Identities=11% Similarity=0.052 Sum_probs=58.4
Q ss_pred EeCCCEEEEeeEEEecCCCCCCeeEEEEeeCCeeeEEeceeeccCC---------eEEeCC-ccEEEEccEEeeeceeEe
Q 041032 63 VSGDGFWARDMTFENTAGPQKHEAVALRVSSDLSMFYRCSFKDYQD---------TLFTLS-LRQFYRDCQIYGTIDFIV 132 (268)
Q Consensus 63 v~a~~f~a~niti~Nt~g~~~~QAvAl~~~~dr~~f~~c~~~g~QD---------TL~~~~-gr~yf~~c~I~G~vDFIf 132 (268)
...+++.++||++.|+.. ..+-+. .+.+.+.+|.+.+..| =+-... -....++|+|...=|=|.
T Consensus 132 ~~~~nv~i~~iti~nsp~----~~i~i~--~~nv~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIa 205 (362)
T 1czf_A 132 HGLDSSSITGLNIKNTPL----MAFSVQ--ANDITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQDDCLA 205 (362)
T ss_dssp EEEETEEEESCEEECCSS----CCEEEE--CSSEEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEECSSCSEE
T ss_pred eecccEEEEEEEEecCCc----cEEEEe--eCCEEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEecCCCEEE
Confidence 346789999999999832 334444 7778888888876432 222222 233677777776555443
Q ss_pred -ccc-eeEEEeeEEEEeccCCCCceEEEeC--CCCCCCCCeeEEEEcCEEee
Q 041032 133 -GDA-AAVFQNFDIFVRRPMHDQSNMVTAQ--GRDNPNENTGISIEGSRIRP 180 (268)
Q Consensus 133 -G~g-~a~f~~c~i~~~~~~~~~~~~ItA~--~r~~~~~~~G~vf~~c~i~~ 180 (268)
+.+ ...|++|.+.. .+| |.-- ++.....-....|.||++..
T Consensus 206 iksg~nI~i~n~~~~~------ghG-isiGS~G~~~~~~v~nV~v~n~~~~~ 250 (362)
T 1czf_A 206 VNSGENIWFTGGTCIG------GHG-LSIGSVGDRSNNVVKNVTIEHSTVSN 250 (362)
T ss_dssp ESSEEEEEEESCEEES------SCC-EEEEEECSSSCCEEEEEEEEEEEEEE
T ss_pred EeCCeEEEEEEEEEeC------Cce-eEEeeccccCCCCEEEEEEEeeEEEC
Confidence 333 35666666552 123 3221 11112223356677777764
No 35
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=72.10 E-value=17 Score=32.90 Aligned_cols=20 Identities=15% Similarity=0.084 Sum_probs=15.0
Q ss_pred EEEE-eCCCEEEEeeEEEecC
Q 041032 60 TFGV-SGDGFWARDMTFENTA 79 (268)
Q Consensus 60 T~~v-~a~~f~a~niti~Nt~ 79 (268)
.+.+ ..+++.+++|+|+|+.
T Consensus 106 ~i~~~~~~nv~i~~i~i~nsp 126 (339)
T 1ia5_A 106 FFAAHSLTNSVISGLKIVNSP 126 (339)
T ss_dssp CEEEEEEEEEEEESCEEECCS
T ss_pred EEEEeecCcEEEEEEEEEcCC
Confidence 3444 5678999999999984
No 36
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=71.65 E-value=58 Score=29.39 Aligned_cols=116 Identities=12% Similarity=0.187 Sum_probs=74.4
Q ss_pred EEEEe-CCCEEEEeeEEEecCCCC----------CCeeEEEEe-eCCeeeEEeceeeccCCeEEeCCccE-EEEccEEee
Q 041032 60 TFGVS-GDGFWARDMTFENTAGPQ----------KHEAVALRV-SSDLSMFYRCSFKDYQDTLFTLSLRQ-FYRDCQIYG 126 (268)
Q Consensus 60 T~~v~-a~~f~a~niti~Nt~g~~----------~~QAvAl~~-~~dr~~f~~c~~~g~QDTL~~~~gr~-yf~~c~I~G 126 (268)
.+.+. .+++.++|++|.+..+.. ..-.=++.+ .++.+...+|.+...-|-+....|+. .+++|++.+
T Consensus 129 ~i~i~~~~nv~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~ 208 (349)
T 1hg8_A 129 CFDITGSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYNQDDCVAVTSGTNIVVSNMYCSG 208 (349)
T ss_dssp EEEEESCEEEEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEECSSCSEEESSEEEEEEEEEEEES
T ss_pred eEEEeccCCEEEEEEEEECCCCccccccccccccCCCCCeEEEccccEEEEEeeEEecCCCeEEeeCCeEEEEEeEEEeC
Confidence 34443 578999999999964311 112234555 45889999999998888999888866 889999987
Q ss_pred eceeEecc---------ceeEEEeeEEEEeccCCCCceEEE-eCCCCCCCCCeeEEEEcCEEeeC
Q 041032 127 TIDFIVGD---------AAAVFQNFDIFVRRPMHDQSNMVT-AQGRDNPNENTGISIEGSRIRPA 181 (268)
Q Consensus 127 ~vDFIfG~---------g~a~f~~c~i~~~~~~~~~~~~It-A~~r~~~~~~~G~vf~~c~i~~~ 181 (268)
.-.+-+|. -...|++|+|..... +=.|- .+++ ...-..+.|.|.++...
T Consensus 209 ghGisiGS~G~~~~~~v~nV~v~n~~~~~~~~----GirIKt~~g~--~G~v~nI~~~ni~~~~v 267 (349)
T 1hg8_A 209 GHGLSIGSVGGKSDNVVDGVQFLSSQVVNSQN----GCRIKSNSGA--TGTINNVTYQNIALTNI 267 (349)
T ss_dssp SCCEEEEEESSSSCCEEEEEEEEEEEEEEEEE----EEEEEEETTC--CEEEEEEEEEEEEEEEE
T ss_pred CcceEEccccccccCCEEEEEEEEEEEECCCc----EEEEEecCCC--CccccceEEEEEEEEcc
Confidence 66666654 135688888775321 11232 2332 11123456888777753
No 37
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=71.56 E-value=34 Score=30.74 Aligned_cols=20 Identities=20% Similarity=0.042 Sum_probs=15.3
Q ss_pred EEEE-eCCCEEEEeeEEEecC
Q 041032 60 TFGV-SGDGFWARDMTFENTA 79 (268)
Q Consensus 60 T~~v-~a~~f~a~niti~Nt~ 79 (268)
.+.+ ..+++.+++|+|+|+.
T Consensus 102 ~i~~~~~~nv~i~giti~nsp 122 (339)
T 2iq7_A 102 FFYAHSLKSSNIKGLNVLNTP 122 (339)
T ss_dssp CEEEEEEEEEEEECCEEECCS
T ss_pred EEEEeeeCcEEEEEEEEEeCC
Confidence 3444 5778999999999984
No 38
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=68.34 E-value=18 Score=32.59 Aligned_cols=110 Identities=20% Similarity=0.245 Sum_probs=71.0
Q ss_pred eCCCEEEEeeEEEecCCCC--CCeeEEEEe-eCCeeeEEeceeeccCCeEEeCCccE-EEEccEEeeeceeEecc-----
Q 041032 64 SGDGFWARDMTFENTAGPQ--KHEAVALRV-SSDLSMFYRCSFKDYQDTLFTLSLRQ-FYRDCQIYGTIDFIVGD----- 134 (268)
Q Consensus 64 ~a~~f~a~niti~Nt~g~~--~~QAvAl~~-~~dr~~f~~c~~~g~QDTL~~~~gr~-yf~~c~I~G~vDFIfG~----- 134 (268)
..+++.++|++|.+..+.. ..-.=++.+ ....+...+|.|...-|-+....|+. .+++|++.+.--+-+|.
T Consensus 130 ~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDciaiksg~nI~i~n~~~~~ghGisiGSlg~~~ 209 (339)
T 2iq7_A 130 SATTLGVYDVIIDNSAGDSAGGHNTDAFDVGSSTGVYISGANVKNQDDCLAINSGTNITFTGGTCSGGHGLSIGSVGGRS 209 (339)
T ss_dssp SCEEEEEESCEEECGGGGGTTCCSCCSEEEESCEEEEEESCEEECSSCSEEESSEEEEEEESCEEESSCCEEEEEESSSS
T ss_pred ccCCEEEEEEEEECCccccccCCCCCcEEEcCcceEEEEecEEecCCCEEEEcCCccEEEEeEEEECCceEEECcCCccc
Confidence 3578999999999874210 111233555 45888999999988788888888866 89999999876776765
Q ss_pred ----ceeEEEeeEEEEeccCCCCce-EE-EeCCCCCCCCCeeEEEEcCEEee
Q 041032 135 ----AAAVFQNFDIFVRRPMHDQSN-MV-TAQGRDNPNENTGISIEGSRIRP 180 (268)
Q Consensus 135 ----g~a~f~~c~i~~~~~~~~~~~-~I-tA~~r~~~~~~~G~vf~~c~i~~ 180 (268)
....|++|++.... .| .| +.+++ ...-....|.|.++..
T Consensus 210 ~~~v~nV~v~n~~~~~~~-----~girIkt~~g~--~G~v~nI~~~ni~~~~ 254 (339)
T 2iq7_A 210 DNTVKTVTISNSKIVNSD-----NGVRIKTVSGA--TGSVSGVTYSGITLSN 254 (339)
T ss_dssp CCEEEEEEEEEEEEESCS-----EEEEEEEETTC--CCEEEEEEEEEEEEEE
T ss_pred CCCEEEEEEEeeEEECCC-----cEEEEEEeCCC--CeEEEEEEEEeEEccC
Confidence 22567777765321 12 12 22332 1223356688888775
No 39
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=68.26 E-value=43 Score=30.11 Aligned_cols=110 Identities=14% Similarity=0.219 Sum_probs=71.5
Q ss_pred eCCCEEEEeeEEEecCCCC--CCeeEEEEe-eCCeeeEEeceeeccCCeEEeCCccE-EEEccEEeeeceeEecc-----
Q 041032 64 SGDGFWARDMTFENTAGPQ--KHEAVALRV-SSDLSMFYRCSFKDYQDTLFTLSLRQ-FYRDCQIYGTIDFIVGD----- 134 (268)
Q Consensus 64 ~a~~f~a~niti~Nt~g~~--~~QAvAl~~-~~dr~~f~~c~~~g~QDTL~~~~gr~-yf~~c~I~G~vDFIfG~----- 134 (268)
..+++.++|++|.+..+.. ..-.=++.+ .++.+...+|.|...-|-+....|+. .+++|++.+.--+-+|.
T Consensus 134 ~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~ghGisiGS~g~~~ 213 (339)
T 1ia5_A 134 GSDYLTLKDITIDNSDGDDNGGHNTDAFDIGTSTYVTISGATVYNQDDCVAVNSGENIYFSGGYCSGGHGLSIGSVGGRS 213 (339)
T ss_dssp SCEEEEEESCEEECGGGTTTTCCSCCSEEEESCEEEEEESCEEECSSCSEEESSEEEEEEESCEEESSSCEEEEEECSSS
T ss_pred cccCeEEeeEEEECCccccccCCCCCcEEecCCceEEEEeeEEEcCCCeEEEeCCeEEEEEeEEEECCceEEECcCCccc
Confidence 3578999999999874311 111233555 45889999999988889999988866 89999998876666655
Q ss_pred ----ceeEEEeeEEEEeccCCCCce-EE-EeCCCCCCCCCeeEEEEcCEEee
Q 041032 135 ----AAAVFQNFDIFVRRPMHDQSN-MV-TAQGRDNPNENTGISIEGSRIRP 180 (268)
Q Consensus 135 ----g~a~f~~c~i~~~~~~~~~~~-~I-tA~~r~~~~~~~G~vf~~c~i~~ 180 (268)
....|++|++.... .| .| +.+++ ...-..+.|.|.++..
T Consensus 214 ~~~v~nV~v~n~~~~~t~-----~girIKt~~g~--~G~v~nI~~~ni~~~~ 258 (339)
T 1ia5_A 214 DNTVKNVTFVDSTIINSD-----NGVRIKTNIDT--TGSVSDVTYKDITLTS 258 (339)
T ss_dssp CCEEEEEEEEEEEEESCS-----EEEEEEEETTC--CCEEEEEEEEEEEEEE
T ss_pred CCCEEEEEEEeeEEECCC-----cEEEEEEeCCC--CcEEEeeEEEEEEEEC
Confidence 12456777765321 12 23 22333 1223456688888774
No 40
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=68.06 E-value=66 Score=28.89 Aligned_cols=36 Identities=17% Similarity=0.196 Sum_probs=19.7
Q ss_pred eCCeeeEEeceeeccCCeEEeCCccE-EEEccEEeee
Q 041032 92 SSDLSMFYRCSFKDYQDTLFTLSLRQ-FYRDCQIYGT 127 (268)
Q Consensus 92 ~~dr~~f~~c~~~g~QDTL~~~~gr~-yf~~c~I~G~ 127 (268)
.+..+...+|.|...-|-+....|+. .+++|++.+.
T Consensus 158 ~s~nV~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~g 194 (335)
T 1k5c_A 158 SANNVTIQNCIVKNQDDCIAINDGNNIRFENNQCSGG 194 (335)
T ss_dssp ECSSEEEESCEEESSSCSEEEEEEEEEEEESCEEESS
T ss_pred cCCeEEEEeeEEEcCCCEEEeeCCeeEEEEEEEEECC
Confidence 44555566666655555555554443 5666666553
No 41
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=62.68 E-value=40 Score=30.73 Aligned_cols=114 Identities=15% Similarity=0.172 Sum_probs=71.7
Q ss_pred EEEeCCCEEEEeeEEEecCCCC--CCeeEEEEe-eCCeeeEEeceeeccCCeEEeCCccE-EEEccEEeeeceeEecc-c
Q 041032 61 FGVSGDGFWARDMTFENTAGPQ--KHEAVALRV-SSDLSMFYRCSFKDYQDTLFTLSLRQ-FYRDCQIYGTIDFIVGD-A 135 (268)
Q Consensus 61 ~~v~a~~f~a~niti~Nt~g~~--~~QAvAl~~-~~dr~~f~~c~~~g~QDTL~~~~gr~-yf~~c~I~G~vDFIfG~-g 135 (268)
+.+..+++.++|++|.+..+.. .+-.=++.+ ....+...+|.|...-|-+..+.|+. .+++|++.+.-=+-+|. |
T Consensus 152 i~i~~~nv~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~ghGisiGS~G 231 (362)
T 1czf_A 152 FSVQANDITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQDDCLAVNSGENIWFTGGTCIGGHGLSIGSVG 231 (362)
T ss_dssp EEEECSSEEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEECSSCSEEESSEEEEEEESCEEESSCCEEEEEEC
T ss_pred EEEeeCCEEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEecCCCEEEEeCCeEEEEEEEEEeCCceeEEeecc
Confidence 3333789999999999964210 111233555 45889999999998889999988766 89999998755455554 1
Q ss_pred --------eeEEEeeEEEEeccCCCCceEEE-eCCCCCCCCCeeEEEEcCEEee
Q 041032 136 --------AAVFQNFDIFVRRPMHDQSNMVT-AQGRDNPNENTGISIEGSRIRP 180 (268)
Q Consensus 136 --------~a~f~~c~i~~~~~~~~~~~~It-A~~r~~~~~~~G~vf~~c~i~~ 180 (268)
...|++|++..... .=.|- .+++. +.-..+.|.|-++..
T Consensus 232 ~~~~~~v~nV~v~n~~~~~t~~----GirIKt~~g~~--G~v~nI~~~ni~~~~ 279 (362)
T 1czf_A 232 DRSNNVVKNVTIEHSTVSNSEN----AVRIKTISGAT--GSVSEITYSNIVMSG 279 (362)
T ss_dssp SSSCCEEEEEEEEEEEEEEEEE----EEEEEEETTCC--EEEEEEEEEEEEEEE
T ss_pred ccCCCCEEEEEEEeeEEECCce----EEEEEEeCCCC--ceEeeEEEEeEEEEC
Confidence 25677787764321 11222 23321 112345677777664
No 42
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=62.00 E-value=44 Score=32.68 Aligned_cols=115 Identities=10% Similarity=0.106 Sum_probs=62.2
Q ss_pred EEEE-eCCCEEEEeeEEEecCCCC----CC----------------eeEEEEe-eCCeeeEEeceeeccCCeEEeCCc--
Q 041032 60 TFGV-SGDGFWARDMTFENTAGPQ----KH----------------EAVALRV-SSDLSMFYRCSFKDYQDTLFTLSL-- 115 (268)
Q Consensus 60 T~~v-~a~~f~a~niti~Nt~g~~----~~----------------QAvAl~~-~~dr~~f~~c~~~g~QDTL~~~~g-- 115 (268)
.+.+ ..+++.++||+|+|+..-. .. -.=++.+ .+..+.+.+|.|...-|-+....|
T Consensus 333 ~i~~~~~~nv~I~giti~ns~~~~i~~~~~~nv~i~~v~i~~~~~~NtDGidi~~s~nV~I~n~~i~~gDD~Iaiksg~~ 412 (608)
T 2uvf_A 333 LMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGLIHQTYDANNGDGIEFGNSQNVMVFNNFFDTGDDCINFAAGTG 412 (608)
T ss_dssp SEEEESEEEEEEESCEEECCSSCSEEEESCEEEEEESCEEECTTCTTCCSEEEESCEEEEEESCEEECSSCSEEEECCCS
T ss_pred EEEEEeeeeEEEeCcEEecCCCCEEEEecCCCEEEeeEEEcCCCCCCCCeEEecCCceEEEEeeEEecCCceEEecCCcC
Confidence 3444 4678999999999974210 00 0112333 235677777777765555555433
Q ss_pred ----------cEEEEccEEeeeceeE-eccc------eeEEEeeEEEEeccCCCCceE-E-EeCCCCCCCCCeeEEEEcC
Q 041032 116 ----------RQFYRDCQIYGTIDFI-VGDA------AAVFQNFDIFVRRPMHDQSNM-V-TAQGRDNPNENTGISIEGS 176 (268)
Q Consensus 116 ----------r~yf~~c~I~G~vDFI-fG~g------~a~f~~c~i~~~~~~~~~~~~-I-tA~~r~~~~~~~G~vf~~c 176 (268)
...+++|++.+.-+-+ +|.. ...|++|++.... .|. | +.++|. +.-..+.|.|+
T Consensus 413 ~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~~~~~v~nI~v~n~~~~~t~-----~GirIKt~~g~g--G~v~nI~~~ni 485 (608)
T 2uvf_A 413 EKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHTGAWIEDILAENNVMYLTD-----IGLRAKSTSTIG--GGARNVTFRNN 485 (608)
T ss_dssp GGGGGSCCEEEEEEESCEECSSSCSEEEESCCTTCEEEEEEESCEEESCS-----EEEEEEEETTTC--CEEEEEEEEEE
T ss_pred ccccccccccCEEEEeEEEeCCCCeEEEcccCCCCEEEEEEEeEEEECCC-----ceEEEeeecCCC--ceEECcEEEee
Confidence 2367777777665543 5652 3667777666321 121 2 333332 12234567777
Q ss_pred EEeeC
Q 041032 177 RIRPA 181 (268)
Q Consensus 177 ~i~~~ 181 (268)
++...
T Consensus 486 ~m~~v 490 (608)
T 2uvf_A 486 AMRDL 490 (608)
T ss_dssp EEEEE
T ss_pred EEEcc
Confidence 77653
No 43
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=61.45 E-value=33 Score=30.81 Aligned_cols=114 Identities=12% Similarity=0.175 Sum_probs=73.4
Q ss_pred EEEeCCCEEEEeeEEEecCCCC--CCeeEEEEe-eCCeeeEEeceeeccCCeEEeCCccE-EEEccEEeeeceeEecc--
Q 041032 61 FGVSGDGFWARDMTFENTAGPQ--KHEAVALRV-SSDLSMFYRCSFKDYQDTLFTLSLRQ-FYRDCQIYGTIDFIVGD-- 134 (268)
Q Consensus 61 ~~v~a~~f~a~niti~Nt~g~~--~~QAvAl~~-~~dr~~f~~c~~~g~QDTL~~~~gr~-yf~~c~I~G~vDFIfG~-- 134 (268)
+.+..+++.++|++|.+..+.. .+-.=++.+ .+..+...+|.|...-|-+....|+. .+++|+..+.-.+-+|.
T Consensus 126 i~i~~~nv~i~~~~I~~~~~d~~~~~ntDGidi~~s~nV~I~n~~i~~gDDciaiksg~nI~i~n~~~~~ghGisiGS~g 205 (336)
T 1nhc_A 126 ISVQATNVHLNDFTIDNSDGDDNGGHNTDGFDISESTGVYISGATVKNQDDCIAINSGESISFTGGTCSGGHGLSIGSVG 205 (336)
T ss_dssp EEEEEEEEEEESCEEECTTHHHHTCCSCCSEEECSCEEEEEESCEEESSSEEEEESSEEEEEEESCEEESSSEEEEEEES
T ss_pred EEEEeCCEEEEEEEEECCCcccccCCCCCcEEecCCCeEEEEeCEEEcCCCEEEEeCCeEEEEEeEEEECCcCceEccCc
Confidence 3334778999999999974200 011233555 35788899999988888888888866 89999999877777765
Q ss_pred -------ceeEEEeeEEEEeccCCCCceE-E-EeCCCCCCCCCeeEEEEcCEEeeC
Q 041032 135 -------AAAVFQNFDIFVRRPMHDQSNM-V-TAQGRDNPNENTGISIEGSRIRPA 181 (268)
Q Consensus 135 -------g~a~f~~c~i~~~~~~~~~~~~-I-tA~~r~~~~~~~G~vf~~c~i~~~ 181 (268)
....|++|++.... .|. | +.++| ...-..+.|.|.++...
T Consensus 206 ~~~~~~v~nV~v~n~~~~~t~-----~girIkt~~g~--~G~v~nI~~~ni~~~~v 254 (336)
T 1nhc_A 206 GRDDNTVKNVTISDSTVSNSA-----NGVRIKTIYKE--TGDVSEITYSNIQLSGI 254 (336)
T ss_dssp SSSCCEEEEEEEEEEEEESCS-----EEEEEEEETTC--CCEEEEEEEEEEEEEEE
T ss_pred cccCCCEEEEEEEeeEEECCC-----cEEEEEEECCC--CCEEeeeEEeeEEeecc
Confidence 12567777765321 122 2 22332 12234566888877753
No 44
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=61.03 E-value=72 Score=31.09 Aligned_cols=34 Identities=15% Similarity=0.123 Sum_probs=17.3
Q ss_pred CeeeEEeceeeccCCeEEeCC----c--cEEEEccEEeee
Q 041032 94 DLSMFYRCSFKDYQDTLFTLS----L--RQFYRDCQIYGT 127 (268)
Q Consensus 94 dr~~f~~c~~~g~QDTL~~~~----g--r~yf~~c~I~G~ 127 (268)
..+.+.||.+.+..+-+..+. + ..++++|.+.|+
T Consensus 422 ~nI~I~n~~~~~ghg~~~iGS~~~~~v~nI~v~n~~~~~t 461 (608)
T 2uvf_A 422 KGAWLFNNYFRMGHGAIVTGSHTGAWIEDILAENNVMYLT 461 (608)
T ss_dssp EEEEEESCEECSSSCSEEEESCCTTCEEEEEEESCEEESC
T ss_pred cCEEEEeEEEeCCCCeEEEcccCCCCEEEEEEEeEEEECC
Confidence 455666666665444322221 1 236666666665
No 45
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=59.89 E-value=33 Score=31.90 Aligned_cols=42 Identities=7% Similarity=0.160 Sum_probs=24.3
Q ss_pred ceEEEE-eCCCEEEEeeEEEecCCCCCCeeEEEEe-eCCeeeEEeceeec
Q 041032 58 PATFGV-SGDGFWARDMTFENTAGPQKHEAVALRV-SSDLSMFYRCSFKD 105 (268)
Q Consensus 58 saT~~v-~a~~f~a~niti~Nt~g~~~~QAvAl~~-~~dr~~f~~c~~~g 105 (268)
...+.+ ..+++.++||+|+|+... .+.+ ..+.+.+.+|++.+
T Consensus 127 p~~i~~~~~~nv~I~~iti~nsp~~------~i~i~~~~nv~I~n~~I~~ 170 (422)
T 1rmg_A 127 ARILRLTDVTHFSVHDIILVDAPAF------HFTMDTCSDGEVYNMAIRG 170 (422)
T ss_dssp CEEEEEEEEEEEEEEEEEEECCSSC------SEEEEEEEEEEEEEEEEEC
T ss_pred ceEEEEcccceEEEECeEEECCCce------EEEEeCcCCEEEEeEEEEC
Confidence 344444 467899999999987421 1222 33455555555554
No 46
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=56.13 E-value=77 Score=30.63 Aligned_cols=109 Identities=14% Similarity=0.082 Sum_probs=71.3
Q ss_pred EeCCCEEEEeeEEEecCCCCCCeeEEEEeeC-Ce--eeEEeceeecc----CCeEEeCCccEEEEccEEeeeceeEe-cc
Q 041032 63 VSGDGFWARDMTFENTAGPQKHEAVALRVSS-DL--SMFYRCSFKDY----QDTLFTLSLRQFYRDCQIYGTIDFIV-GD 134 (268)
Q Consensus 63 v~a~~f~a~niti~Nt~g~~~~QAvAl~~~~-dr--~~f~~c~~~g~----QDTL~~~~gr~yf~~c~I~G~vDFIf-G~ 134 (268)
...+++.+++|+|.|+. ...+.+.... +. ..+.++++.+. =|=+-.. -....++|+|.=.=|-|- +.
T Consensus 290 ~~c~nV~I~Giti~Nsp----~w~i~i~~~~~~ni~V~I~n~~i~~~~~~NTDGidi~-~nV~I~n~~i~~gDDcIaIks 364 (549)
T 1x0c_A 290 NSSQTFVLNGVTVSAPP----FNSMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMY-PGTILQDVFYHTDDDGLKMYY 364 (549)
T ss_dssp SSCEEEEEESCEEECCS----SCSEEEECSCGGGEEEEEEEEEEECCCBTTCCCCBCC-TTCEEEEEEEEESSCCEECCS
T ss_pred CCceEEEEECcEEECCC----ceeEEeeccCCCCCeEEEEeeEeEcCCCCCCCccccc-CCEEEEeeEEeCCCCEEEECC
Confidence 34568999999999984 3445555555 67 88999988641 2222222 345788999988888775 44
Q ss_pred ceeEEEeeEEEEeccCCCCceEEEeCCCCCCCCCeeEEEEcCEEeeCC
Q 041032 135 AAAVFQNFDIFVRRPMHDQSNMVTAQGRDNPNENTGISIEGSRIRPAA 182 (268)
Q Consensus 135 g~a~f~~c~i~~~~~~~~~~~~ItA~~r~~~~~~~G~vf~~c~i~~~~ 182 (268)
....+++|++..... ++.|+- |.. ...-....|.||+|....
T Consensus 365 ~NI~I~n~~~~~~~g----~~~Isi-Gs~-~~~V~NV~v~n~~i~~s~ 406 (549)
T 1x0c_A 365 SNVTARNIVMWKESV----APVVEF-GWT-PRNTENVLFDNVDVIHQA 406 (549)
T ss_dssp SSEEEEEEEEEECSS----SCSEEC-CBS-CCCEEEEEEEEEEEEECC
T ss_pred CCEEEEeeEEEcCCC----CceEEE-CCC-CCcEEEEEEEeeEEECcc
Confidence 568899999875321 222544 322 344457889999998643
No 47
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=52.01 E-value=2e+02 Score=29.10 Aligned_cols=78 Identities=14% Similarity=0.166 Sum_probs=45.8
Q ss_pred eCCCEEEEeeEEEecCCCCCCeeEEEE----------------eeCCeeeEEeceeeccCC-eEEeCCccE-EEEccEEe
Q 041032 64 SGDGFWARDMTFENTAGPQKHEAVALR----------------VSSDLSMFYRCSFKDYQD-TLFTLSLRQ-FYRDCQIY 125 (268)
Q Consensus 64 ~a~~f~a~niti~Nt~g~~~~QAvAl~----------------~~~dr~~f~~c~~~g~QD-TL~~~~gr~-yf~~c~I~ 125 (268)
..+++.++||+|.|+.. +.+-+. +.+..+...+|.|.+.|| =+.....+. .+++|++.
T Consensus 141 ~ckNV~I~gVti~NSp~----~gI~I~np~~NDGid~DGi~fdi~S~NV~I~Nc~I~ntGDDcIAIksSeNI~I~Nc~c~ 216 (772)
T 3gqn_A 141 ACHNVYIRDIEAVDCTL----HGIDITCGGLDYPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHHSQYINILNCYSH 216 (772)
T ss_dssp SCEEEEEEEEEEESCSS----CSEEEECSSSSCCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECSCEEEEEESCEEE
T ss_pred eeceEEEEeEEEEeCCC----CCEEEeCCCcCCcCCCcCcccccccceEEEEeeEEEecCcCeEEecCCceEEEEeEEEE
Confidence 45678899999998854 122222 114567788888876544 445544433 77888874
Q ss_pred ee------ceeEecc--ceeEEEeeEEE
Q 041032 126 GT------IDFIVGD--AAAVFQNFDIF 145 (268)
Q Consensus 126 G~------vDFIfG~--g~a~f~~c~i~ 145 (268)
|. -=+-.|. ....+++|++.
T Consensus 217 gphG~S~~~GIsIGsgs~NVtV~Nc~~~ 244 (772)
T 3gqn_A 217 DPRLTANCNGFEIDDGSRHVVLSNNRSK 244 (772)
T ss_dssp CCSSSSSCCSEEECTTCEEEEEEEEEEE
T ss_pred CCCCCCCcccEEecCCcccEEEEceEEE
Confidence 32 1122233 24667777776
No 48
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=48.31 E-value=87 Score=29.03 Aligned_cols=46 Identities=4% Similarity=-0.076 Sum_probs=20.3
Q ss_pred CCCEEEEeeEEEecCCCCCCeeEEEEeeCCeeeEEeceeeccCCeEEeC
Q 041032 65 GDGFWARDMTFENTAGPQKHEAVALRVSSDLSMFYRCSFKDYQDTLFTL 113 (268)
Q Consensus 65 a~~f~a~niti~Nt~g~~~~QAvAl~~~~dr~~f~~c~~~g~QDTL~~~ 113 (268)
.+++.++|++|.+...+ ..-+ +.+.+.++...+|.|...-|-+...
T Consensus 158 ~~nv~I~n~~I~~~d~~-ntDG--idi~~~nV~I~n~~i~~gDD~Iai~ 203 (422)
T 1rmg_A 158 CSDGEVYNMAIRGGNEG-GLDG--IDVWGSNIWVHDVEVTNKDECVTVK 203 (422)
T ss_dssp EEEEEEEEEEEECCSST-TCCS--EEEEEEEEEEEEEEEESSSEEEEEE
T ss_pred cCCEEEEeEEEECCCCC-CCcc--EeecCCeEEEEeeEEeCCCCeEEeC
Confidence 45666666666661111 1111 2222244555555555444444443
No 49
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=45.15 E-value=1.4e+02 Score=29.09 Aligned_cols=106 Identities=9% Similarity=0.042 Sum_probs=66.9
Q ss_pred eCCCEEEEeeEEEecCCCCCCeeEEEEeeCCee--eEEeceeec---c-CCeEEeCCccEEEEccEEeeeceeEe-ccce
Q 041032 64 SGDGFWARDMTFENTAGPQKHEAVALRVSSDLS--MFYRCSFKD---Y-QDTLFTLSLRQFYRDCQIYGTIDFIV-GDAA 136 (268)
Q Consensus 64 ~a~~f~a~niti~Nt~g~~~~QAvAl~~~~dr~--~f~~c~~~g---~-QDTL~~~~gr~yf~~c~I~G~vDFIf-G~g~ 136 (268)
..+++.+++|||.|+.. ..+-+ ...+.+ .+.+|++.+ . -|=+-.. -....++|+|.=.=|=|. +...
T Consensus 331 ~c~NV~I~Giti~NSp~----w~i~~-~~c~nV~~~I~nv~i~~~~~~nTDGIDi~-~NV~I~nc~I~~gDDcIaIks~N 404 (574)
T 1ogo_X 331 GGQTWYCVGPTINAPPF----NTMDF-NGNSGISSQISDYKQVGAFFFQTDGPEIY-PNSVVHDVFWHVNDDAIKIYYSG 404 (574)
T ss_dssp SSEEEEEESCEEECCSS----CSEEE-CSSSCEEEEEEEEEEECCCSTTCCCCBCC-TTCEEEEEEEEESSCSEECCSTT
T ss_pred CceeEEEECeEEECCCC----cEEee-cCCCChhhEEEeeEeeCCCCCCCccCccc-CCEEEEeeEEECCCCEEEECCcc
Confidence 56789999999999732 22221 346667 788887763 2 2333333 344788888887777764 4455
Q ss_pred eEEEeeEEEEeccCCCCceEEEeCCCCCCCCCeeEEEEcCEEeeC
Q 041032 137 AVFQNFDIFVRRPMHDQSNMVTAQGRDNPNENTGISIEGSRIRPA 181 (268)
Q Consensus 137 a~f~~c~i~~~~~~~~~~~~ItA~~r~~~~~~~G~vf~~c~i~~~ 181 (268)
..+++|++.+... ++.|.--+ +...-..+.|.||++...
T Consensus 405 I~I~nc~i~~g~g----~g~IsIGS--~~g~V~NV~v~N~~i~~~ 443 (574)
T 1ogo_X 405 ASVSRATIWKCHN----DPIIQMGW--TSRDISGVTIDTLNVIHT 443 (574)
T ss_dssp CEEEEEEEEECSS----SCSEECCS--SCCCEEEEEEEEEEEEEC
T ss_pred EEEEeEEEECCCC----CceEEEcC--CCCcEEEEEEEeEEEECC
Confidence 7889999886421 23244322 234455788999999764
No 50
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=31.96 E-value=3.2e+02 Score=25.45 Aligned_cols=16 Identities=6% Similarity=0.040 Sum_probs=7.6
Q ss_pred eeeEEeceeeccCCeE
Q 041032 95 LSMFYRCSFKDYQDTL 110 (268)
Q Consensus 95 r~~f~~c~~~g~QDTL 110 (268)
.+.|.||.|.+.+.-|
T Consensus 311 nV~v~n~~~~~t~~Gi 326 (448)
T 3jur_A 311 NVVARNNVYMNVERAL 326 (448)
T ss_dssp EEEEESCEEESCSEEE
T ss_pred EEEEEEEEEecccceE
Confidence 4445555554444443
No 51
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=28.49 E-value=3.2e+02 Score=24.44 Aligned_cols=107 Identities=10% Similarity=0.099 Sum_probs=63.2
Q ss_pred CCCEEEEeeEEEecCCCCCCeeEEEEe-eCCeeeEEeceeeccCCeEEeCC------c-cEEEEccEEeeeceeEecc--
Q 041032 65 GDGFWARDMTFENTAGPQKHEAVALRV-SSDLSMFYRCSFKDYQDTLFTLS------L-RQFYRDCQIYGTIDFIVGD-- 134 (268)
Q Consensus 65 a~~f~a~niti~Nt~g~~~~QAvAl~~-~~dr~~f~~c~~~g~QDTL~~~~------g-r~yf~~c~I~G~vDFIfG~-- 134 (268)
.+++++.|++|.+....... =++.+ .+..+...+|.|...-|-+.... . ...+++|++.+.-=+-+|.
T Consensus 182 ~~~v~i~~v~I~~~~~~~Nt--DGid~~~s~nV~I~n~~i~~gDDcIaiks~~~~~~s~nI~I~n~~~~~ghGisiGSe~ 259 (376)
T 1bhe_A 182 GDGFTAWKTTIKTPSTARNT--DGIDPMSSKNITIAYSNIATGDDNVAIKAYKGRAETRNISILHNDFGTGHGMSIGSET 259 (376)
T ss_dssp CEEEEEEEEEEECCTTCSSC--CSEEEESCEEEEEESCEEECSSCSEEEEECTTSCCEEEEEEEEEEECSSSCEEEEEEE
T ss_pred CCcEEEEeEEEECCCCCCCC--ceEeecCCceEEEEeCEEecCCCeEEEcccCCCCCceEEEEEeeEEEccccEEeccCC
Confidence 46899999999986542122 23444 35788889999987777777662 2 2377888887543344443
Q ss_pred ---ceeEEEeeEEEEeccCCCCce-EEEe-CCCCCCCCCeeEEEEcCEEee
Q 041032 135 ---AAAVFQNFDIFVRRPMHDQSN-MVTA-QGRDNPNENTGISIEGSRIRP 180 (268)
Q Consensus 135 ---g~a~f~~c~i~~~~~~~~~~~-~ItA-~~r~~~~~~~G~vf~~c~i~~ 180 (268)
...+|++|+|.-.. .| .|-. +++. ..-....|.|.++..
T Consensus 260 ~~v~nV~v~n~~~~~t~-----~GirIKt~~g~~--G~v~ni~f~ni~~~~ 303 (376)
T 1bhe_A 260 MGVYNVTVDDLKMNGTT-----NGLRIKSDKSAA--GVVNGVRYSNVVMKN 303 (376)
T ss_dssp SSEEEEEEEEEEEESCS-----EEEEEECCTTTC--CEEEEEEEEEEEEES
T ss_pred ccEeeEEEEeeEEeCCC-----cEEEEEEecCCC--ceEeeEEEEeEEEeC
Confidence 34667777776321 23 2221 2221 112345688877764
No 52
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=27.67 E-value=3.2e+02 Score=24.21 Aligned_cols=104 Identities=13% Similarity=0.179 Sum_probs=64.3
Q ss_pred eCCCEEEEeeEEEecCCCCCCeeEEEEe-eCCe-eeEEeceeeccCC----------eEEeCCccEEEEccEEeeeceeE
Q 041032 64 SGDGFWARDMTFENTAGPQKHEAVALRV-SSDL-SMFYRCSFKDYQD----------TLFTLSLRQFYRDCQIYGTIDFI 131 (268)
Q Consensus 64 ~a~~f~a~niti~Nt~g~~~~QAvAl~~-~~dr-~~f~~c~~~g~QD----------TL~~~~gr~yf~~c~I~G~vDFI 131 (268)
..+ +.+++|++.|+.. . .+.+ ..+. +.+.+|.+....| -+-...-....++|+|.-.=|=|
T Consensus 104 ~~~-v~i~giti~nsp~----~--~i~i~~~~n~v~i~~v~I~~~~~d~~~~~~NtDGidi~s~nV~I~n~~i~~gDDcI 176 (335)
T 1k5c_A 104 KGS-GTYKKFEVLNSPA----Q--AISVGPTDAHLTLDGITVDDFAGDTKNLGHNTDGFDVSANNVTIQNCIVKNQDDCI 176 (335)
T ss_dssp EEE-EEEESCEEESCSS----C--CEEEEEEEEEEEEESCEEECGGGGGGGCCCSCCSEEEECSSEEEESCEEESSSCSE
T ss_pred ceE-EEEEEEEEECCCc----c--eEEEEccCCeEEEEEEEEECCCCcccccCCCCCeEcccCCeEEEEeeEEEcCCCEE
Confidence 345 9999999999843 2 3444 4566 9999999997532 12222234588999998765655
Q ss_pred e-cc-ceeEEEeeEEEEeccCCCCceEEEeCCCCCCCCCeeEEEEcCEEeeC
Q 041032 132 V-GD-AAAVFQNFDIFVRRPMHDQSNMVTAQGRDNPNENTGISIEGSRIRPA 181 (268)
Q Consensus 132 f-G~-g~a~f~~c~i~~~~~~~~~~~~ItA~~r~~~~~~~G~vf~~c~i~~~ 181 (268)
- +. ....+++|.+..- +| |.--+......-....|.||++...
T Consensus 177 aiksg~nI~i~n~~~~~g------hG-isIGS~g~~~~v~nV~v~n~~~~~t 221 (335)
T 1k5c_A 177 AINDGNNIRFENNQCSGG------HG-ISIGSIATGKHVSNVVIKGNTVTRS 221 (335)
T ss_dssp EEEEEEEEEEESCEEESS------CC-EEEEEECTTCEEEEEEEESCEEEEE
T ss_pred EeeCCeeEEEEEEEEECC------cc-CeEeeccCCCCEEEEEEEeeEEECC
Confidence 4 33 3477888877631 24 3331111122334678999998854
Done!